HHsearch alignment for GI: 255764460 and conserved domain: cd03288
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=95.65 E-value=0.019 Score=35.04 Aligned_cols=41 Identities=27% Similarity=0.364 Sum_probs=30.0
Q ss_pred CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf 972688079997068723789999998752008987999973
Q gi|255764460|r 62 GGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDA 103 (363)
Q Consensus 62 GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~ 103 (363)
T Consensus 42 l~I~~Ge~vaIvG~sGsGKSTL~~ll~gl~~p~~G~I-~idg 82 (257)
T cd03288 42 AYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKI-VIDG 82 (257)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEE-EECC
T ss_conf 9987999999999999819999999960566788889-9998