HHsearch alignment for GI: 255764460 and conserved domain: pfam00154

>pfam00154 RecA recA bacterial DNA recombination protein. RecA is a DNA-dependent ATPase and functions in DNA repair systems. RecA protein catalyses an ATP-dependent DNA strand-exchange reaction that is the central step in the repair of dsDNA breaks by homologous recombination.
Probab=100.00  E-value=0  Score=764.32  Aligned_cols=322  Identities=73%  Similarity=1.145  Sum_probs=315.1

Q ss_pred             HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf             99999999986761887379703665533465501477278999723897268807999706872378999999875200
Q gi|255764460|r   14 KALEAALSQIQRVYGKGAIMQLGSQGSIFEGIEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQK   93 (363)
Q Consensus        14 ~~l~~~~~~i~k~~g~~~~~~lg~~~~~~~~~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk   93 (363)
T Consensus         1 ~~l~~~~~~i~k~~g~~~i~~~~~~~--~~~~~~i~tgs~~lD~aLg~GGlP~GRi~ei~G~essGKTtlal~~ia~aQk   78 (322)
T pfam00154         1 KALEAALSQIEKQFGKGSIMRLGDKT--VEDVEVISTGSLGLDIALGIGGLPKGRIIEIYGPESSGKTTLALHAIAEAQK   78 (322)
T ss_pred             CHHHHHHHHHHHHHCCCCEEECCCCC--CCCCCEEECCHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf             95899999999973987458888877--7775446158089999875899778708999889877789999999999973


Q ss_pred             CCCEEEEEECCCCCCHHHHHHHCCCHHHEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCC
Q ss_conf             89879999738855668899819883344897258489999999999744897689981433322026554345553022
Q gi|255764460|r   94 TGGTCAFVDAEHALDSIYARKLGVDLKNLLISQPDTGEQALEITDMLVRSGAVDIIVIDSVAALTPRAEIEGDMGESLPG  173 (363)
Q Consensus        94 ~g~~~~~iD~E~~~~~~~a~~~Gvd~~~l~~~~~~~~E~~~~i~~~li~~~~~~liViDSi~al~p~~Eie~~~~d~~~g  173 (363)
T Consensus        79 ~gg~~~~iD~E~a~d~~~a~~lGVD~~~l~~~qpd~~Eqal~i~~~li~~~~~~liViDSvaal~p~~E~e~~~~d~~~g  158 (322)
T pfam00154        79 AGGTAAFIDAEHALDPVYAKKLGVDIDNLLVSQPDTGEQALEIADMLVRSGAVDLIVVDSVAALVPKAEIEGEMGDSHVG  158 (322)
T ss_pred             CCCEEEEEEHHHHCCHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCC
T ss_conf             49938998536605988999809880253897788399999999998537997659982534567688875243223213


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEE
Q ss_conf             47888767767777642017818999863411456654665125655311111124897504553445772476799987
Q gi|255764460|r  174 MQARLMSQALRKLTSSISRSKCILVFINQMRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRVGSIKDKDSITGNQTRVK  253 (363)
Q Consensus       174 ~~ar~ms~~lrkl~~~~~k~~~~~i~iNQ~r~~ig~m~g~p~~~~GG~al~~~aS~rl~i~k~~~ik~~~~~iG~~v~~k  253 (363)
T Consensus       159 ~~Ar~ms~alRklt~~l~k~~~~~IfiNQ~R~kiG~mfg~pe~t~GG~Alkf~aSvri~l~k~~~iK~g~~~vG~~i~~k  238 (322)
T pfam00154       159 LQARLMSQALRKLTGNISKSNTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKKGEEVIGNRTKVK  238 (322)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHCCCCCCCCCCCCCCCHHHCCEEEEEEEEEECCCCCCCCCEEEEEEEE
T ss_conf             57999999999999997305854999765511146646998547786425411003787765010146786336999999


Q ss_pred             EEECCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCEECCCEEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             74057789851589998618742311159999973286230274478889450303899999986679999999999999
Q gi|255764460|r  254 VVKNKMASPFKQVEFDIMYGEGISFFGELIDLGVKASIVDKSGAWFSFKGQRLGQGRENSKIFLRENIEIAENIESLLRQ  333 (363)
Q Consensus       254 v~Knk~~~P~~~a~~~i~fg~GI~~~~~lldla~~~giI~k~Gawy~~~~e~~gqGk~~~~~~l~enp~l~~~i~~~ire  333 (363)
T Consensus       239 vvKnK~a~P~~~ae~~i~y~~GId~~~~lldla~~~giI~k~Gawy~y~ge~~~qG~~~~~~~l~e~~~l~~~i~~~i~~  318 (322)
T pfam00154       239 VVKNKVAPPFKQAEFDIMYGEGISKEGELIDLGVKLGIVEKSGAWYSYNGEKIGQGRENAKQYLKENPEIAAEIEQKIRE  318 (322)
T ss_pred             EEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCEEECCEEECCHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_conf             98367489986799996158876643259999997796772256099899886245999999988699999999999999


Q ss_pred             HHCC
Q ss_conf             8177
Q gi|255764460|r  334 NAGL  337 (363)
Q Consensus       334 ~~~~  337 (363)
T Consensus       319 ~~~~  322 (322)
T pfam00154       319 KLGL  322 (322)
T ss_pred             HHCC
T ss_conf             8396