HHsearch alignment for GI: 255764460 and conserved domain: pfam00448
>pfam00448 SRP54 SRP54-type protein, GTPase domain. This family includes relatives of the G-domain of the SRP54 family of proteins.
Probab=97.93 E-value=0.00023 Score=47.21 Aligned_cols=86 Identities=22% Similarity=0.339 Sum_probs=56.9
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCH-------HHHHHHCCCHHHEEEEECCCHHHHHHHHHHH
Q ss_conf 079997068723789999998752008987999973885566-------8899819883344897258489999999999
Q gi|255764460|r 68 RIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALDS-------IYARKLGVDLKNLLISQPDTGEQALEITDML 140 (363)
Q Consensus 68 ri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~~-------~~a~~~Gvd~~~l~~~~~~~~E~~~~i~~~l 140 (363)
T Consensus 2 ~vi~lvGptGvGKTTTiaKLAa~~~~~~~~V~lit~D-t~R~gA~eQL~~ya~~l~v~~~~~~~-~~d~~~~~~~~l~~~ 79 (196)
T pfam00448 2 NVILLVGLQGSGKTTTIAKLAAYLKKQGKKVLLVAAD-TFRAAAIEQLKQLAERLGVPVFGSGT-GSDPAAVAFDAVEKA 79 (196)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECC-CCCHHHHHHHHHHHHHCCCEEEECCC-CCCHHHHHHHHHHHH
T ss_conf 6999989999988999999999999779928999758-77688999999999863981781487-778789999999998
Q ss_pred HHCCCCCEEEEECCCC
Q ss_conf 7448976899814333
Q gi|255764460|r 141 VRSGAVDIIVIDSVAA 156 (363)
Q Consensus 141 i~~~~~~liViDSi~a 156 (363)
T Consensus 80 -~~~~~D~IlIDTaGr 94 (196)
T pfam00448 80 -KAENYDVVLVDTAGR 94 (196)
T ss_pred -HHCCCCEEEEECCCC
T ss_conf -846899999989998