HHsearch alignment for GI: 255764460 and conserved domain: pfam05729

>pfam05729 NACHT NACHT domain. This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation. This family is closely related to pfam00931.

Probab=96.06  E-value=0.016  Score=35.59  Aligned_cols=84  Identities=23%  Similarity=0.263  Sum_probs=43.6

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHH----C-CCEEEEEECCCCCCHHHHHHHCCCHHHEEEEE-C---CCHHHHHHHHH
Q ss_conf             07999706872378999999875200----8-98799997388556688998198833448972-5---84899999999
Q gi|255764460|r   68 RIVEIYGPESSGKTTLALHTIAQSQK----T-GGTCAFVDAEHALDSIYARKLGVDLKNLLISQ-P---DTGEQALEITD  138 (363)
Q Consensus        68 ri~ei~G~~~sGKTtlal~~~a~~qk----~-g~~~~~iD~E~~~~~~~a~~~Gvd~~~l~~~~-~---~~~E~~~~i~~  138 (363)
T Consensus         1 r~i~i~G~aG~GKTtll~kl~~~wa~g~~~~~~~~vf~~~~r~~~~~~---~--~sl~~ll~~~~~~~~~~~~~~~---~   72 (165)
T pfam05729         1 RTVILQGEAGSGKTTLLQKLALLWAQGKLPQDFDFVFFLPCRELSRSG---E--ASLADLLFSQWPEPAAPVSEVW---A   72 (165)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHCCCC---C--CCHHHHHHHHCCCCCCCHHHHH---H
T ss_conf             989998279898999999999999869843697289999956707776---6--8999999987677457637899---9


Q ss_pred             HHHHCCCCCEEEEECCCCCCC
Q ss_conf             997448976899814333220
Q gi|255764460|r  139 MLVRSGAVDIIVIDSVAALTP  159 (363)
Q Consensus       139 ~li~~~~~~liViDSi~al~p  159 (363)
T Consensus        73 ~~~~~~~k~L~ilDGlDE~~~   93 (165)
T pfam05729        73 VILELPERVLLILDGLDELAS   93 (165)
T ss_pred             HHHHCCCCEEEEECCHHHHCC
T ss_conf             998397728999648455144