HHsearch alignment for GI: 255764461 and conserved domain: COG0018
>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=99.88 E-value=2.2e-20 Score=169.78 Aligned_cols=345 Identities=22% Similarity=0.277 Sum_probs=205.2
Q ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCC----------------------------CCC
Q ss_conf 8881799788899998832224789789999999988589803623643----------------------------702
Q gi|255764461|r 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGT----------------------------DEH 54 (511)
Q Consensus 3 ~~~~~~vt~~~Py~ng~lHlGH~~~~i~~D~~~R~~r~~G~~v~~~~g~----------------------------D~h 54 (511)
T Consensus 115 ~~~kV~iE~sSaNptkplHiGHlR~aiiGDsLaril~~~Gy~V~r~~yvnD~G~Q~~~l~~~~~~~~~e~~~~~~~~~~~ 194 (577)
T COG0018 115 KGKKVVIEYSSANPTGPLHIGHLRNAIIGDSLARILEFLGYDVTRENYVNDWGTQIGMLALSYEKRGREALGLTPEPDGY 194 (577)
T ss_pred CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
T ss_conf 99879998747999998523323536889999999998399766786678579999999999999554101377772068
Q ss_pred -CHHH-HHH--HHH-CCC---------------CHH-----HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf -2799-999--998-399---------------989-----999999999999999808898867477888899999999
Q gi|255764461|r 55 -GQKI-AKA--AQN-AGV---------------TTK-----VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109 (511)
Q Consensus 55 -g~~i-~~~--A~~-~g~---------------~p~-----e~~~~~~~~~~~~~~~~~i~~D~~~rT~~~~~~~~~~~~ 109 (511)
T Consensus 195 lg~~y~~i~~~~~~~~~~~~~~~~~~~~k~e~~d~~~~lw~~~v~~~l~~~k~~l~~l~V~fD~~~~E~e~~~~~~~~~v 274 (577)
T COG0018 195 LGEYYVKIAKDLEEDPGNDEEEAREEVEKLESGDEEAELWRKFVDLSLEGIKETLDRLGVKFDVYDSEGESFYNGKVEKV 274 (577)
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCHHHH
T ss_conf 89999999999974846126788999998864775789999999999999999999929530013234265526649999
Q ss_pred HHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 88875431022110001011334301556672111222222223320000345443446664444434443333210006
Q gi|255764461|r 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189 (511)
Q Consensus 110 ~~~l~~~G~iy~~~~~~~y~~~~~~~~~~~~v~~~~~~~~~~~~~~p~~~~~~~~~f~~l~~~~~~l~~~~~~~~~~~~p 189 (511)
T Consensus 275 v~~L~~~~~~~e~--~GA~~vd-------------------------------------l~~~~----~~---------- 301 (577)
T COG0018 275 VEDLEEKGLLYED--DGALVVD-------------------------------------LLKFK----KF---------- 301 (577)
T ss_pred HHHHHHCCCEEEE--CCEEEEE-------------------------------------HHHHH----HC----------
T ss_conf 9999866977600--9958986-------------------------------------43211----11----------
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC
Q ss_conf 76545775410345675323433377765786422214646024443220012346765431000241100004564321
Q gi|255764461|r 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269 (511)
Q Consensus 190 ~~~~~~~~~wl~~gl~Dw~ISR~~~~WGipiP~~~~~~~YVWfDa~~gY~s~~~~~~~~~~~~~~~w~~d~~~~G~Dii~ 269 (511)
T Consensus 302 ------------gd~~~~vl~KSD---Gt--------~lY~t~D--IAy---~~~K~~--~~~----d~~IyV~gadq~~ 347 (577)
T COG0018 302 ------------GDDKDRVLQKSD---GT--------YLYFTRD--IAY---HLYKFE--RGF----DKLIYVLGADQHG 347 (577)
T ss_pred ------------CCCCCEEEEECC---CC--------EEEEHHH--HHH---HHHHHH--CCC----CEEEEEECCCCHH
T ss_conf ------------687772899769---97--------0542538--999---999973--699----8899996786244
Q ss_pred HHCCHHHHHHHHHHHHCCCCCCCCCC---EEE-CCCCCCHHHCCCCCCCCHHHHCC----------------------CC
Q ss_conf 00010247765433101232333430---330-58601000002211100000022----------------------11
Q gi|255764461|r 270 FHAIYWPAFLLSANLPLPKKVFSHGF---ILH-KGEKISKSLGNVIDPIEVIEEVG----------------------VD 323 (511)
Q Consensus 270 Fh~i~~pa~l~~~~~~~p~~i~~~g~---l~~-~G~KMSKS~GN~I~~~e~l~~~g----------------------~D 323 (511)
T Consensus 348 ~~~ql~-~~l~~~g~~~~~~~~~h~~~~l~~~~~g~kmStR~G~~vtl~dllde~~era~~~~~~~~~~~~~iA~~vgi~ 426 (577)
T COG0018 348 HFKQLK-AVLELLGYGPDKEVLLHQGVGLVRGGEGVKMSTRAGNVVTLDDLLDEAGERAPEEMEEKEEKNEEIAEVVGID 426 (577)
T ss_pred HHHHHH-HHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999-9999846998656189997752577877634224886578999999998876667654321157777775240
Q ss_pred CCCHHHEEECCCCCCCEECCCCCCCCH-HHHHHHHHHHCCH-HHHHHHHHCCCCCCCCCC----CCC-HHHHHHHHHHHH
Q ss_conf 121110000247873011122211100-1332110221021-345565312332103455----589-556566789999
Q gi|255764461|r 324 ALRYFLVREIACGKDGFYDKDGLKKRV-NADLANGIGNLVS-RSVSMILKDYDGMIPTPG----AFT-ESDESILSVCSR 396 (511)
Q Consensus 324 ~lR~~l~~~~~~~~D~~Fs~~~~~~~~-n~~L~~~lgN~~~-R~~~f~~k~~~g~ip~~~----~~~-~~D~~ll~~l~~ 396 (511)
T Consensus 427 Avry~~l~~-~~~~~~~Fd~d~~lsfegNt---~pYvQYA~ARi~SIlrka~e~~~~~~~~~~~~l~~~~E~~L~~~L~~ 502 (577)
T COG0018 427 AVRYADLSR-SRDKDYVFDWDKALSFEGNT---APYVQYAHARICSILRKAGEDELDLSTEADALLTELEERELVKKLLE 502 (577)
T ss_pred HHHHHHHHC-CCCCCCEEEHHHHHHCCCCC---CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCHHHHHHHHHHHH
T ss_conf 678998862-89999475399997445997---21599999999999985444345533222101068279999999998
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCH
Q ss_conf 999999877503589999999999999978865418701216999
Q gi|255764461|r 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 (511)
Q Consensus 397 ~~~~v~~a~e~~~~~~Al~~i~~l~~~~N~yi~~~~PW~l~k~d~ 441 (511)
T Consensus 503 fp~vl~~aa~~~~Ph~la~YL~~LA~~Fn~fY~~~~--Vl~~~~~ 545 (577)
T COG0018 503 FPEVLEEAAEELEPHRLANYLYDLAGSFNSFYNACP--VLGAENE 545 (577)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCH
T ss_conf 499999999856955999999999999999985087--7789957