HHsearch alignment for GI: 255764461 and conserved domain: PRK05729
>PRK05729 valS valyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=716.18 Aligned_cols=479 Identities=24% Similarity=0.381 Sum_probs=392.6
Q ss_pred CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHH----CCCCHHH------
Q ss_conf 888817997888999988322247897899999999885898036236437022799999998----3999899------
Q gi|255764461|r 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN----AGVTTKV------ 71 (511)
Q Consensus 2 ~~~~~~~vt~~~Py~ng~lHlGH~~~~i~~D~~~R~~r~~G~~v~~~~g~D~hg~~i~~~A~~----~g~~p~e------ 71 (511)
T Consensus 32 ~~~~~f~~~~pPP~~~G~lHiGHa~~~~i~D~i~Ry~rm~G~~V~~~pG~D~~Gl~~e~~vek~l~~~g~~~~~~~re~f 111 (877)
T PRK05729 32 KSKKPFSIVIPPPNVTGSLHMGHALNNTLQDILIRYKRMQGYNTLWLPGTDHAGIATQMVVERQLAAEGKTRHDLGREKF 111 (877)
T ss_pred CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCHHHH
T ss_conf 89997799728898879861216674889999999987279966888986888605689999999874998354489999
Q ss_pred ------HHHHHHHHHHHHHHHHCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHCC
Q ss_conf ------9999999999999980889886--74778888999999998887543102211000101133430155667211
Q gi|255764461|r 72 ------FVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143 (511)
Q Consensus 72 ------~~~~~~~~~~~~~~~~~i~~D~--~~rT~~~~~~~~~~~~~~~l~~~G~iy~~~~~~~y~~~~~~~~~~~~v~~ 143 (511)
T Consensus 112 ~~~~~~w~~~~~~~i~~q~~rlG~s~Dw~~~~~T~d~~~~~~v~~~F~~L~~kGliyr~~~~V~wcp~~~Tals~~EV~~ 191 (877)
T PRK05729 112 LEKVWEWKEESGGTITNQLRRLGASVDWSRERFTMDEGLSKAVREVFVRLYEKGLIYRGKRLVNWDPKLQTALSDLEVEY 191 (877)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCEECCCCCCCCCHHHHHHHHC
T ss_conf 99999999999999999999828603358984558988999999999999988997841312366887788435678732
Q ss_pred CC------------------------------------------------------------------------------
Q ss_conf 12------------------------------------------------------------------------------
Q gi|255764461|r 144 GA------------------------------------------------------------------------------ 145 (511)
Q Consensus 144 ~~------------------------------------------------------------------------------ 145 (511)
T Consensus 192 ~~~~~~~~~ikf~l~~~~~~l~i~TTrPeTl~~~~avav~P~dery~~l~Gk~~~~P~~~~~ipii~d~~V~~~~GTG~V 271 (877)
T PRK05729 192 KEVKGKLWHIRYPLADGSDYLVVATTRPETMLGDTAVAVNPEDERYKHLIGKKVILPLVGREIPIIADEYVDPEFGTGAV 271 (877)
T ss_pred CCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEECCCCHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCCE
T ss_conf 45667338984132478874765016852344645788468874889855988980588975328715752677784617
Q ss_pred ---------------------------CC-----------------------------------------CCCCCCCCCE
Q ss_conf ---------------------------22-----------------------------------------2222233200
Q gi|255764461|r 146 ---------------------------DG-----------------------------------------QYYNAQHNPV 157 (511)
Q Consensus 146 ---------------------------~~-----------------------------------------~~~~~~~~p~ 157 (511)
T Consensus 272 ~~~Pah~~~D~~~~~~~~L~~~~~id~~G~~~~~~~~~~G~~~~~ar~~Ii~~L~~~g~l~~~~~~~h~~p~~~R~~~pi 351 (877)
T PRK05729 272 KITPAHDFNDFEVGKRHNLPMINIMDEDGTINENAGEYQGLDRFEARKAIVADLEELGLLVKIEPHKHSVGHSDRSGVVI 351 (877)
T ss_pred EECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEE
T ss_conf 97168997899988764887434656676404574102997088988999999997799774321356787546778569
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC--------------
Q ss_conf 003454434466644444344433332100067654577541034567532343337776578642--------------
Q gi|255764461|r 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD-------------- 223 (511)
Q Consensus 158 ~~~~~~~~f~~l~~~~~~l~~~~~~~~~~~~p~~~~~~~~~wl~~gl~Dw~ISR~~~~WGipiP~~-------------- 223 (511)
T Consensus 352 ~~~~~~QWFi~~~~l~~~~l~~~~~~~i~~~P~~~~~~~~~wl~n-~~DWcISRqr-~WG~piPvw~~~~~~~~v~~~~~ 429 (877)
T PRK05729 352 EPYLSDQWFVKMKPLAKPALEAVEDGKIKFVPKRWENTYFHWMEN-IQDWCISRQL-WWGHRIPAWYDEDGEVYVGRTEP 429 (877)
T ss_pred EEECCCCCEECCCHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHC-CCCCCCCCCC-CCCCCEEEEECCCCCEEECCCHH
T ss_conf 974130100003357999999860588312577888499998605-6555113554-46884258991898489416756
Q ss_pred -------------CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHCCHHHH-HHH-H---HHHH
Q ss_conf -------------221464602444322001234676543100024110000456432100010247-765-4---3310
Q gi|255764461|r 224 -------------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA-FLL-S---ANLP 285 (511)
Q Consensus 224 -------------~~~~~YVWfDa~~gY~s~~~~~~~~~~~~~~~w~~d~~~~G~Dii~Fh~i~~pa-~l~-~---~~~~ 285 (511)
T Consensus 430 ~~~~~~~~~~~~~d~DVlDtWFsSgl~p~s~lg~p~-~~~~~~~~~P~d~~~~G~Dii~f----Wv~rm~~~~~~~~~~~ 504 (877)
T PRK05729 430 EARAKAGSENLTQDEDVLDTWFSSALWPFSTLGWPD-KTPDLKRFYPTSVLVTGFDIIFF----WVARMIMMGLHFTGQV 504 (877)
T ss_pred HHHHHCCCCCCEECCCCCCCHHHCCCCCCCCCCCCC-CHHHHCCCCCCCCCCCCCCHHEE----EEEEEECCEEEECCCC
T ss_conf 644323876525565322334431666644166865-20544247887545206552113----4444431032011237
Q ss_pred CCCCCCCCCCEEE-CCCCCCHHHCCCCCCCCHHHHCCCCCCCHHHEEECCCCCCCEECCCCCCCCHHHHHHHHHHHCCHH
Q ss_conf 1232333430330-586010000022111000000221112111000024787301112221110013321102210213
Q gi|255764461|r 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 (511)
Q Consensus 286 ~p~~i~~~g~l~~-~G~KMSKS~GN~I~~~e~l~~~g~D~lR~~l~~~~~~~~D~~Fs~~~~~~~~n~~L~~~lgN~~~R 364 (511)
T Consensus 505 Pfk~v~~hG~v~D~~G~KMSKS~GNvidP~~vi~~yGaDalR~~l~~~~~~g~di~~~~~~v~~~r--~f~nKlwN-~~r 581 (877)
T PRK05729 505 PFKDVYIHGLVRDEQGRKMSKSKGNVIDPLDLIDKYGADALRFTLAALASPGRDIRFDEERVEGYR--NFANKLWN-ASR 581 (877)
T ss_pred CCHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHH--HHHHHHHH-HHH
T ss_conf 611020044378898877878788989989999871919999999970776766000689999999--99999999-999
Q ss_pred HHHHHHHCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH--HHHHHHHHHHCCCHHHCCCH
Q ss_conf 455653123-321034555895565667899999999998775035899999999999--99978865418701216999
Q gi|255764461|r 365 SVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNP 441 (511)
Q Consensus 365 ~~~f~~k~~-~g~ip~~~~~~~~D~~ll~~l~~~~~~v~~a~e~~~~~~Al~~i~~l~--~~~N~yi~~~~PW~l~k~d~ 441 (511)
T Consensus 582 f~~~~~~~~~~~~~~~~~~~~~~D~WIlskL~~~i~~v~~~~~~y~f~~a~~~ly~F~w~d~cdwYlE~~K~-rl~~~~~ 660 (877)
T PRK05729 582 FVLMNLEGQDPGFLPDEAELSLADRWILSRLNRTVAEVTEALDKYRFDEAAQALYEFIWNEFCDWYLELAKP-VLNGGDE 660 (877)
T ss_pred HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCH
T ss_conf 999724656644456621067879999999999999998750002099999999998467557899999799-7708877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHCC
Q ss_conf 99999999999999999998543224899999998498800079555101
Q gi|255764461|r 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491 (511)
Q Consensus 442 ~~~~~vl~~~l~~l~~l~ilL~Pi~P~~ae~i~~~Lg~~~~~~~~~~~~~ 491 (511)
T Consensus 661 ~~~~~~~~~L~~vL~~~L~lLhPfmPFitEElwq~L~~~~~si~~~~wP~ 710 (877)
T PRK05729 661 AAKRGTRATLAYVLEEILRLLHPFMPFITEELWQKLAPEGESIMLAPWPE 710 (877)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCC
T ss_conf 88999999999999999998560135759999985778897468637999