HHsearch alignment for GI: 255764461 and conserved domain: PRK05743
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=669.43 Aligned_cols=470 Identities=23% Similarity=0.335 Sum_probs=367.1
Q ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHC-C-----CCHH------
Q ss_conf 888179978889999883222478978999999998858980362364370227999999983-9-----9989------
Q gi|255764461|r 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-G-----VTTK------ 70 (511)
Q Consensus 3 ~~~~~~vt~~~Py~ng~lHlGH~~~~i~~D~~~R~~r~~G~~v~~~~g~D~hg~~i~~~A~~~-g-----~~p~------ 70 (511)
T Consensus 47 ~~~~f~l~dgPPyanG~lH~GHaln~tlkDii~Rykrm~G~~v~~~pGwD~hGLPiE~~v~k~~g~~~~~~~~~~f~~~c 126 (910)
T PRK05743 47 GKPKFILHDGPPYANGDIHIGHALNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKVEKKLGKKRKKLSAAEFRKKC 126 (910)
T ss_pred CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf 98977982799998986424477878999999999875899679999658686999999999619981319999999999
Q ss_pred -HHHHHHHHHHHHHHHHHCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHCCCC--
Q ss_conf -99999999999999980889886--7477888899999999888754310221100010113343015566721112--
Q gi|255764461|r 71 -VFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-- 145 (511)
Q Consensus 71 -e~~~~~~~~~~~~~~~~~i~~D~--~~rT~~~~~~~~~~~~~~~l~~~G~iy~~~~~~~y~~~~~~~~~~~~v~~~~-- 145 (511)
T Consensus 127 r~~a~~~i~~~~~q~~rlG~~~DW~~~y~T~d~~y~~~~~~~F~~l~ekGliYr~~kpV~Wcp~~~TaLA~~EVey~d~~ 206 (910)
T PRK05743 127 REYALEQVDIQREDFKRLGVLGDWDNPYLTMDFEYEANIIRVLGKMAKKGYLYKGLKPVYWSPDCGSALAEAEVEYHDKT 206 (910)
T ss_pred HHHHHHHHHHHHHHHHHHCEEEECCCCEECCCHHHHHHHHHHHHHHHHCCCEEECCCCCEECCCCCCCCCCHHEECCCEE
T ss_conf 99999999999999997190264589726689889999999999999869968578232048999944001010057754
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q gi|255764461|r 146 -------------------------------------------------------------------------------- 145 (511)
Q Consensus 146 -------------------------------------------------------------------------------- 145 (511)
T Consensus 207 s~si~v~f~l~~~~~~~~~~~~~~~~iwTTtPwTl~~n~avav~p~~~Y~~~~~~~~~iva~~l~~~~~~~~~~~~~~~~ 286 (910)
T PRK05743 207 SPSIYVAFPVVDGKAGLDGLKDASLVIWTTTPWTLPANQAIAVHPELDYALVEVGEKLILAKDLVESVLKRLGWEDYEVL 286 (910)
T ss_pred CCEEEEEEEECCCCCCCCCCCCCEEEEEECCHHHHHCCCEEEECCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCEEEE
T ss_conf 32599998943763333456774399970884034206468877875056403674554199899999998477430665
Q ss_pred ------------------------------------------------------------------CC------------
Q ss_conf ------------------------------------------------------------------22------------
Q gi|255764461|r 146 ------------------------------------------------------------------DG------------ 147 (511)
Q Consensus 146 ------------------------------------------------------------------~~------------ 147 (511)
T Consensus 287 ~~~~G~~L~g~~~~~P~~~~~~pii~~d~V~~~~GTG~Vh~aPaHg~~D~~~~~~~~L~~~~~vd~~G~~~~~~~~~~G~ 366 (910)
T PRK05743 287 ATFKGAELEGLVAQHPFYDRDSPVILGDHVTLDAGTGLVHTAPGHGEDDYVVGQKYGLEVLNPVDDDGVYTEEAPLFAGL 366 (910)
T ss_pred EEEECCEECCCEEECCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 32205350376897677896522784473267777611885787984367788764998654458776343677445883
Q ss_pred -----------------------------CCCCCCCCCEECCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf -----------------------------222223320000345443446664--4444344433332100067654577
Q gi|255764461|r 148 -----------------------------QYYNAQHNPVQWMEEEGYFFRLSA--YQDKLLSYYESHPEFILPIERRNEV 196 (511)
Q Consensus 148 -----------------------------~~~~~~~~p~~~~~~~~~f~~l~~--~~~~l~~~~~~~~~~~~p~~~~~~~ 196 (511)
T Consensus 367 ~v~~a~~~Ii~~L~~~g~L~~~~~~~Hsyp~cwR~~~Pvi~rat~QWFi~~d~~~~r~~~l~~i~~-v~-~~P~~~~~r~ 444 (910)
T PRK05743 367 FVFKANPKIIELLEEKGALLKLEKITHSYPHCWRTKKPIIFRATPQWFISMDKKTLREQALKAIEK-VK-WIPSWGKNRI 444 (910)
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCEEEECCHHHHHCCCHHHHHHHHHHHHH-CC-EECHHHHHHH
T ss_conf 499889999999987798543421013675332668862676310034234718899999999984-67-4151678799
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCC--------------------------------------------------CCC
Q ss_conf 541034567532343337776578642--------------------------------------------------221
Q gi|255764461|r 197 ISFVKSGLKDLSLSRKTFDWGIKIPDD--------------------------------------------------PQY 226 (511)
Q Consensus 197 ~~wl~~gl~Dw~ISR~~~~WGipiP~~--------------------------------------------------~~~ 226 (511)
T Consensus 445 ~~~i~~-r~DWcISRQR-~WG~PIPv~~~~~~~~~~~~~~~~~~i~~~~~~~G~d~w~~~~~~~~l~~~~~~~~~~r~~D 522 (910)
T PRK05743 445 ESMVEN-RPDWCISRQR-TWGVPIPIFYHKETGELHRTPELIEHVAKLFEKEGIDAWFELDAKELLPEGYPADQYEKETD 522 (910)
T ss_pred HHHHHC-CCCCEEECCC-CCCCCEEEEEECCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHEEECCC
T ss_conf 999707-9886252135-66882259997899700476888999999887507641123999883789898310064475
Q ss_pred CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC--HHCCHHHHHHHHHHHHCCCCCCCCCCEEE-CCCCC
Q ss_conf 4646024443220012346765431000241100004564321--00010247765433101232333430330-58601
Q gi|255764461|r 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKI 303 (511)
Q Consensus 227 ~~YVWfDa~~gY~s~~~~~~~~~~~~~~~w~~d~~~~G~Dii~--Fh~i~~pa~l~~~~~~~p~~i~~~g~l~~-~G~KM 303 (511)
T Consensus 523 vlD~WFdSGs------s~~~~~~~~~~~~~PaDly~eG~Dq~RgWF~s~ll~s~~~-~~~~Pfk~v~~hG~vlD~~G~KM 595 (910)
T PRK05743 523 ILDVWFDSGS------THAAVLEDRERLGYPADLYLEGSDQHRGWFQSSLLTSVAT-NGKAPYKQVLTHGFTVDGKGRKM 595 (910)
T ss_pred CCCCEECCCC------CCHHHCCCCCCCCCCCCEEECCCCHHHEEHHHHHHHEEEE-CCCCCEEEEEECCEEECCCCCCC
T ss_conf 5321002798------6311114662116843232337652210236622122452-17888417986132898988888
Q ss_pred CHHHCCCCCCCCHHHHCCCCCCCHHHEEECCCCCCCEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCC-----
Q ss_conf 000002211100000022111211100002478730111222111001332110221021345565312332103-----
Q gi|255764461|r 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP----- 378 (511)
Q Consensus 304 SKS~GN~I~~~e~l~~~g~D~lR~~l~~~~~~~~D~~Fs~~~~~~~~n~~L~~~lgN~~~R~~~f~~k~~~g~ip----- 378 (511)
T Consensus 596 SKS~GNvidP~~ii~~yGAD~lRlwvas-~d~~~d~~~s~~il~~~--~~~yrKi~N----t~rf~l~nl~~f~~~~~~~ 668 (910)
T PRK05743 596 SKSLGNVIDPQDVIKKYGADILRLWVAS-TDYSGDVRISDEILKQV--AESYRRIRN----TLRFLLGNLNDFDPAKDAV 668 (910)
T ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHH-CCCCCCCCCCHHHHHHH--HHHHHHHHH----HHHHHHHHHCCCCCCCCCC
T ss_conf 8878777998999865494099999872-57434545568999889--999999999----9999986321688322458
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH--HHHHHHHHHHCCCHHHC--CCHHHHHHHHHHHHHH
Q ss_conf 4555895565667899999999998775035899999999999--99978865418701216--9999999999999999
Q gi|255764461|r 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEV 454 (511)
Q Consensus 379 ~~~~~~~~D~~ll~~l~~~~~~v~~a~e~~~~~~Al~~i~~l~--~~~N~yi~~~~PW~l~k--~d~~~~~~vl~~~l~~ 454 (511)
T Consensus 669 ~~~~l~~lD~wiL~~l~~~~~~v~~~~~~y~f~~a~~~l~~F~~~dls~~Y~~~~Kd-rly~~~~~~~~R~s~q~~L~~v 747 (910)
T PRK05743 669 PYEELVELDRWALHRLNELQEEIIEAYENYDFHKVYQALHNFCSVDLSSFYLDIIKD-RLYTDKADSLARRSAQTALYHI 747 (910)
T ss_pred CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCHHHHHHHHHHHHHH
T ss_conf 924465768999999999999999998635588999999988575687999876124-4414789849999999999999
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHCC
Q ss_conf 9999998543224899999998498800079555101
Q gi|255764461|r 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491 (511)
Q Consensus 455 l~~l~ilL~Pi~P~~ae~i~~~Lg~~~~~~~~~~~~~ 491 (511)
T Consensus 748 l~~l~~llaPi~Pf~~EEiw~~l~~~~~SV~l~~wp~ 784 (910)
T PRK05743 748 LEALVRWLAPILSFTAEEIWQYLPEREESVFLEEWPE 784 (910)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCC
T ss_conf 9999999986646999999973889999768267999