HHsearch alignment for GI: 255764461 and conserved domain: PRK12300
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=585.47 Aligned_cols=441 Identities=24% Similarity=0.354 Sum_probs=320.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHC---------------C---------CCHHHHHHH
Q ss_conf 3222478978999999998858980362364370227999999983---------------9---------998999999
Q gi|255764461|r 20 PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA---------------G---------VTTKVFVDQ 75 (511)
Q Consensus 20 lHlGH~~~~i~~D~~~R~~r~~G~~v~~~~g~D~hg~~i~~~A~~~---------------g---------~~p~e~~~~ 75 (511)
T Consensus 1 LH~GH~~~~ti~DiiaRykrM~G~~Vl~p~GwD~~GlPi~~~ae~~~~~~~~~~~~~~~~~~~~~~~i~k~~~~~~~~~~ 80 (888)
T PRK12300 1 LHIGHGRTYTIGDIYARYKRMKGYNVLFPMGFHVTGTPILGIAERIAEGDPETIDIYRNLYGIPEEEIEKFKDPEYIVEY 80 (888)
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 94055478799999999998079977999988889953899999986044468999877513668888875009999999
Q ss_pred HHHHHHHHHHHHCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHCCCCCCC-----
Q ss_conf 999999999980889886--7477888899999999888754310221100010113343015566721112222-----
Q gi|255764461|r 76 NSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ----- 148 (511)
Q Consensus 76 ~~~~~~~~~~~~~i~~D~--~~rT~~~~~~~~~~~~~~~l~~~G~iy~~~~~~~y~~~~~~~~~~~~v~~~~~~~----- 148 (511)
T Consensus 81 ~~~~~~~q~~rlG~s~DW~re~~T~dp~y~~~v~w~F~kL~ekGliyrg~~~V~WcP~~~T~la~~ev~~~~~~~~~~~~ 160 (888)
T PRK12300 81 FSKEAKEAMKRIGYSIDWRREFTTTDPEYSKFIEWQFRKLKEKGLIVKGSHPVGWCPKDENPVGDHDTKDGEEPTIGEYT 160 (888)
T ss_pred HHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCEEECCCCCCCCCCCCCHHHCCCCCCEEEEE
T ss_conf 99999999998386063699866488879999999999999779949787786725987848222055508775516899
Q ss_pred ----------------------------------C---------------------------------------------
Q ss_conf ----------------------------------2---------------------------------------------
Q gi|255764461|r 149 ----------------------------------Y--------------------------------------------- 149 (511)
Q Consensus 149 ----------------------------------~--------------------------------------------- 149 (511)
T Consensus 161 ~ikf~~~~~~l~v~TTrPeTl~g~ta~~v~Pd~~Yv~~~~~~e~~i~~~~~~~~l~~~~~~~~~~~~~~g~~l~G~~~~~ 240 (888)
T PRK12300 161 LIKFEGDDLILPAATLRPETVFGVTNLWVNPDAEYVVAEVDGEKWIVSKEAARKLSFQDREVEIIEEIKGSELIGKKVKN 240 (888)
T ss_pred EEEECCCCEEEEEEECCHHHHHHHHEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCEECCEEEEC
T ss_conf 99971798279997268025430000377776323456427720089999999986222113675320263303508986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q gi|255764461|r 150 -------------------------------------------------------------------------------- 149 (511)
Q Consensus 150 -------------------------------------------------------------------------------- 149 (511)
T Consensus 241 P~~~~~ipI~~ad~V~~~~GTG~V~~vPaHd~~Dy~~~~~~~~~~~~~i~ii~v~~~g~~p~~~~~~~~~i~~~~d~~l~ 320 (888)
T PRK12300 241 PVTGKEVPILPAKFVDPDNGTGVVMSVPAHAPYDYVALRDLDVEEIELIPLIKVEGYGEFPAKEIVEKMGIKSQKDPELE 320 (888)
T ss_pred CCCCCEEEEEECCEECCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCHHHH
T ss_conf 78898735986140747889772896578987789999860724246777232056677527777775077664423477
Q ss_pred --------------------------------------------------------CCCCCCCEECC-CCCCCCCCCC--
Q ss_conf --------------------------------------------------------22233200003-4544344666--
Q gi|255764461|r 150 --------------------------------------------------------YNAQHNPVQWM-EEEGYFFRLS-- 170 (511)
Q Consensus 150 --------------------------------------------------------~~~~~~p~~~~-~~~~~f~~l~-- 170 (511)
T Consensus 321 ~a~~~~y~~e~~~G~l~~~~~~~~G~~v~eA~~~i~~~L~~~g~~~~~y~~~~~~v~~R~g~~~v~~~~~dQWFi~~~~~ 400 (888)
T PRK12300 321 EATKELYKAEFHKGVLREDTGEYAGKPVREAREKITEDLIESGIAEIMYEFSEKPVYCRCGTECVVKVVKDQWFIDYSNP 400 (888)
T ss_pred HHHHHHHHHHHCCCEECCCCHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCH
T ss_conf 77665422231175341565110697999999999999997799740303577886789998676341687641047876
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH--HHHC--------
Q ss_conf 444443444333321000676545775410345675323433377765786422214646024443--2200--------
Q gi|255764461|r 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT--NYLT-------- 240 (511)
Q Consensus 171 ~~~~~l~~~~~~~~~~~~p~~~~~~~~~wl~~gl~Dw~ISR~~~~WGipiP~~~~~~~YVWfDa~~--gY~s-------- 240 (511)
T Consensus 401 ~~k~~~~~~~~~-i~-~~P~~~~~~~~~~l~~-l~DW~iSRqr-~wGtpiPwd~~~~iesl~dstiy~~~yt~~~~~~~~ 476 (888)
T PRK12300 401 EWKELAHKCLDR-MR-IIPEEARAEFENKIDW-LKDRACARRR-GLGTPLPWDERWVIESLSDSTIYMAYYTIAKKIRQY 476 (888)
T ss_pred HHHHHHHHHHCC-CE-EECCHHHHHHHHHHHC-CCCCCCCCCC-CCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCC
T ss_conf 778999987616-65-6572134557877614-6886545666-769788704882342277764001024687876334
Q ss_pred ---------------------------CCCCCC----CCCCCCCCCCCCCHHCCCCCCCCHHCCHHHHHHHH----HHHH
Q ss_conf ---------------------------123467----65431000241100004564321000102477654----3310
Q gi|255764461|r 241 ---------------------------TTGYLD----NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS----ANLP 285 (511)
Q Consensus 241 ---------------------------~~~~~~----~~~~~~~~~w~~d~~~~G~Dii~Fh~i~~pa~l~~----~~~~ 285 (511)
T Consensus 477 ~~~~~~l~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~wyP~D~~~~G~D~i~~hl~f~--~~~~~aif~~~~ 554 (888)
T PRK12300 477 GLDPEQLTPEFFDYVFLGKGDPEEISKKTGIPKEILEEMREEFEYWYPLDWRHSGKDLIPNHLTFF--IFNHVAIFPEEK 554 (888)
T ss_pred CCCHHHCCCHHCCEEECCCCCHHHHHHHHCCCHHHHHHHHHHHCEECCCCCCCCCEEHHHHHHHHH--HHHHHHHHCCCC
T ss_conf 899567581013043148997666666519988899986886464267601435310335679999--988688717777
Q ss_pred CCCCCCCCCCEEECCCCCCHHHCCCCCCCCHHHHCCCCCCCHHHEEECCCCCCCEECCCCCCCCHHHHHHHHHHHCCHHH
Q ss_conf 12323334303305860100000221110000002211121110000247873011122211100133211022102134
Q gi|255764461|r 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 (511)
Q Consensus 286 ~p~~i~~~g~l~~~G~KMSKS~GN~I~~~e~l~~~g~D~lR~~l~~~~~~~~D~~Fs~~~~~~~~n~~L~~~lgN~~~R~ 365 (511)
T Consensus 555 ~pk~v~~~G~Vl~eG~KMSKSkGNvV~P~eiI~~YGADalRl~l~~~a~~~~d~~~~~~~v~~~~~--~l~~~~~~~~~~ 632 (888)
T PRK12300 555 WPRGIVVNGFVLLEGKKMSKSKGNVLPLREAIEEYGADVVRLYLASTAELSQDADFREKEAESIRR--QLERFYELAVEL 632 (888)
T ss_pred CCCEEEEEEEEECCCEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH--HHHHHHHHHHHH
T ss_conf 887579832894598770303489899899997619629999999718855686457999999999--999999999976
Q ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH-HHHHHHHHHHHHHCCCHHHCCCHHHH
Q ss_conf 55653123321034555895565667899999999998775035899999999-99999978865418701216999999
Q gi|255764461|r 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI-SLVSEVDRYFDAQKPWELKKTNPDRA 444 (511)
Q Consensus 366 ~~f~~k~~~g~ip~~~~~~~~D~~ll~~l~~~~~~v~~a~e~~~~~~Al~~i~-~l~~~~N~yi~~~~PW~l~k~d~~~~ 444 (511)
T Consensus 633 ~--------~~-~~~~~~~~~D~wils~l~~~i~~v~~~~e~~~f~~a~~~~~~~~~~~~~~Y~~~~~~---------~~ 694 (888)
T PRK12300 633 A--------EE-ESEEELRFIDKWLLSRLYSYIKEVTEAMEEFQTRKAIQEIFYNLLNDLRWYLRRGGE---------PN 694 (888)
T ss_pred H--------CC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC---------HH
T ss_conf 3--------26-777677667899999999999999999984459999999999999999999987371---------88
Q ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHC
Q ss_conf 9999999999999999854322489999999849880007955510
Q gi|255764461|r 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490 (511)
Q Consensus 445 ~~vl~~~l~~l~~l~ilL~Pi~P~~ae~i~~~Lg~~~~~~~~~~~~ 490 (511)
T Consensus 695 ~~~l~---~~l~~~~~LLaP~~PhiaEElW~~Lg~~~-sV~~a~wP 736 (888)
T PRK12300 695 NKVLR---EVIEIWIRLLAPFTPHLAEEIWEKLGGEG-FVSLAPWP 736 (888)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CEEECCCC
T ss_conf 99999---99999999960410488999999679998-37707999