HHsearch alignment for GI: 255764461 and conserved domain: PRK12558
>PRK12558 glutamyl-tRNA synthetase; Provisional.
Probab=99.24 E-value=1.8e-10 Score=96.47 Aligned_cols=274 Identities=18% Similarity=0.159 Sum_probs=133.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99998832224789789999999988589803623643702279999999839998999999999999999980889886
Q gi|255764461|r 14 AYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93 (511)
Q Consensus 14 Py~ng~lHlGH~~~~i~~D~~~R~~r~~G~~v~~~~g~D~hg~~i~~~A~~~g~~p~e~~~~~~~~~~~~~~~~~i~~D~ 93 (511)
T Consensus 9 PSPTG~lHiG~~rtAl~n~l~Ar~--~~G~fiLRIEDtD~----------------~R~~~~~~~~i~~~L~WlGl~wDe 70 (461)
T PRK12558 9 PSPTGYIHIGNARTALFNWLFARA--HGGKFILRYDDTDV----------------ERSKQEYADAIADDLRWLGLDPDR 70 (461)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEECCCCC----------------CCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 898985327899999999999996--19989998776898----------------768879999999999987999998
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCC-CCHHHHCCCCCCCCCCCCCCCE--EC----C--CCCC
Q ss_conf 747788889999999988875431022110001011334301-5566721112222222233200--00----3--4544
Q gi|255764461|r 94 FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAY-YNDDEVYKGADGQYYNAQHNPV--QW----M--EEEG 164 (511)
Q Consensus 94 ~~rT~~~~~~~~~~~~~~~l~~~G~iy~~~~~~~y~~~~~~~-~~~~~v~~~~~~~~~~~~~~p~--~~----~--~~~~ 164 (511)
T Consensus 71 ~~~--QS~r~~~Y~~~~~~L~~~g~aY~C-----fct~eel~~~r~~~~~~~~~~~Y~~~~~~l~~~~~~~~~~~g~~p~ 143 (461)
T PRK12558 71 VEY--QSKRFDRYAEAAEKLKAAGLLYAC-----YETAEELERRRKIQLARRLPPVYDRAALKLTDAEKAALEAEGRKPH 143 (461)
T ss_pred CCH--HHCCHHHHHHHHHHHHHCCCCEEC-----CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCE
T ss_conf 741--643999999999999986993653-----8888999999999996699988784202299888876662479977
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf 34466644444344433332100067654577541034567532343337776578642221464602444322001234
Q gi|255764461|r 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 (511)
Q Consensus 165 ~f~~l~~~~~~l~~~~~~~~~~~~p~~~~~~~~~wl~~gl~Dw~ISR~~~~WGipiP~~~~~~~YVWfDa~~gY~s~~~~ 244 (511)
T Consensus 144 ~r~~~~~~~~~~~~--~~~~~~~~~D~v~G~i~-~~~~~~~D~Vi~rsD---G~ptY~lA~-VVD---D~~m~------- 206 (461)
T PRK12558 144 WRFLLPNFESDPFA--TQRTEVHWDDLVRGPQT-VDLASLSDPVLVRED---GTYLYTLPS-VVD---DIDMG------- 206 (461)
T ss_pred EEEEECCCCCCCCC--CCCCCEEEEECCCCEEE-ECCCCCCCEEEEECC---CCCEEEEEE-EEC---CCCCC-------
T ss_conf 99983542135567--76772798401463067-334345882899348---971034557-855---75578-------
Q ss_pred CCCCCCCCCCCCCCCHHCC-CCCCC---CHHCCHHHHHHHHHHHHCCCCCCCCCCEE-ECCCCCCHHHCCCCCCCCHHHH
Q ss_conf 6765431000241100004-56432---10001024776543310123233343033-0586010000022111000000
Q gi|255764461|r 245 LDNPDGSKAKFWPADLHVI-GKDIL---RFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEE 319 (511)
Q Consensus 245 ~~~~~~~~~~~w~~d~~~~-G~Dii---~Fh~i~~pa~l~~~~~~~p~~i~~~g~l~-~~G~KMSKS~GN~I~~~e~l~~ 319 (511)
T Consensus 207 --------------IthviRg~d~l~~t~~~~~----l~~alg~~~p~~~-h~pli~~~~g~klskR~g-~~sv~~yr~~ 266 (461)
T PRK12558 207 --------------VTHIIRGDDHVTNTGVQIA----LFRALGAEPPVFG-HHNLLTTASGEGLSKRTG-ALSVGSLREA 266 (461)
T ss_pred --------------CCEEEECHHHHHHCHHHHH----HHHHHCCCCCEEE-ECCEEECCCCCCCCCCCC-CCCHHHHHHC
T ss_conf --------------8544636858861599999----9999579998089-713456899981666689-7589999987
Q ss_pred -CCCCCCCHHHEEECC-CCCCCEECCCCCCCC
Q ss_conf -221112111000024-787301112221110
Q gi|255764461|r 320 -VGVDALRYFLVREIA-CGKDGFYDKDGLKKR 349 (511)
Q Consensus 320 -~g~D~lR~~l~~~~~-~~~D~~Fs~~~~~~~ 349 (511)
T Consensus 267 GylPeAl~NyLalLGWs~~~~Ei~sl~eli~~ 298 (461)
T PRK12558 267 GYEPMAVASLAVLLGTSENVDAAPDMAALAEH 298 (461)
T ss_pred CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHC
T ss_conf 99847899999984799980677648877530