HHsearch alignment for GI: 255764461 and conserved domain: PRK13804

>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional.
Probab=100.00  E-value=0  Score=662.27  Aligned_cols=469  Identities=23%  Similarity=0.354  Sum_probs=362.0

Q ss_pred             CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHC----CCC----------
Q ss_conf             888179978889999883222478978999999998858980362364370227999999983----999----------
Q gi|255764461|r    3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA----GVT----------   68 (511)
Q Consensus         3 ~~~~~~vt~~~Py~ng~lHlGH~~~~i~~D~~~R~~r~~G~~v~~~~g~D~hg~~i~~~A~~~----g~~----------   68 (511)
T Consensus        52 ~~~~f~~~dGPPyanG~lH~GHaln~tikDii~Rykrm~G~~V~~~~GwD~hGLPiE~~vek~l~~~~~~~~~~~~~~f~  131 (966)
T PRK13804         52 GRPKFVLHDGPPYANGNIHIGHALNKILKDVIVRSKQMLGFDANYVPGWDCHGLPIEWKIEEKYRAKGKNKDEVPLNEFR  131 (966)
T ss_pred             CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCHHHHH
T ss_conf             99976995799999998612255666899999999874899668999768887899999999776528982338999999


Q ss_pred             --HHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHCCC
Q ss_conf             --899999999999999998088988--6747788889999999988875431022110001011334301556672111
Q gi|255764461|r   69 --TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG  144 (511)
Q Consensus        69 --p~e~~~~~~~~~~~~~~~~~i~~D--~~~rT~~~~~~~~~~~~~~~l~~~G~iy~~~~~~~y~~~~~~~~~~~~v~~~  144 (511)
T Consensus       132 ~~cr~~a~~~i~~~~~q~~rlG~~~DW~~~y~T~dp~y~~~~~~~F~~l~ekGliYr~~~pV~Wcp~~~TaLA~~EVey~  211 (966)
T PRK13804        132 KECREYALSWIDVQREEFKRLGVIGDWENPYTTMDFHAEARIAREFMKFAAKGQLYRGSKPVMWSVVERTALAEAEVEYH  211 (966)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHCCC
T ss_conf             99999999999999999998292022589842289899999999999999879988438514768988866236754766


Q ss_pred             C-------------------------------------------------------------------------------
Q ss_conf             2-------------------------------------------------------------------------------
Q gi|255764461|r  145 A-------------------------------------------------------------------------------  145 (511)
Q Consensus       145 ~-------------------------------------------------------------------------------  145 (511)
T Consensus       212 d~~s~s~~v~f~v~~~~~~~~~~~~l~iwTTtPwTl~~n~avav~p~~~Y~~~~~~~~~~~~~~~~~~~~i~a~~l~e~~  291 (966)
T PRK13804        212 DHESDTIWVKFPVKDGKGILLTGASVVIWTTTPWTIPANRAISYSPDIEYGLYEVTGAENDNWAKPGEKLVVADALAESV  291 (966)
T ss_pred             CEECCEEEEEEEECCCCCCCCCCCCEEEEECCCCHHHCCCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHH
T ss_conf             78666699998734662000478706775078502202102024577643789950454211244551566547789999


Q ss_pred             --------------------------------------------------------------------------------
Q ss_conf             --------------------------------------------------------------------------------
Q gi|255764461|r  146 --------------------------------------------------------------------------------  145 (511)
Q Consensus       146 --------------------------------------------------------------------------------  145 (511)
                                                                                                      
T Consensus       292 ~~~~~~~~~~~~~~~~G~~l~g~~~~~Pl~~~~~~~~~~~pi~~~d~V~~~~GTG~Vh~aPaHg~~Dy~~~~k~~L~~~~  371 (966)
T PRK13804        292 AKKAGVESFERVRDVKADDLEAIVCAHPLKGLDGGYEFEVPVLDGDHVTDDAGTGFVHTAPGHGREDFEVWMKYGRELEV  371 (966)
T ss_pred             HHHHCCCCEEEEEEECCCEECCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCC
T ss_conf             98737642278730015000476652666555666671578981683156778563775577887889999983987310


Q ss_pred             ----------C-------------------C------------------------------CCCCCCCCCEECCCCCCCC
Q ss_conf             ----------2-------------------2------------------------------2222233200003454434
Q gi|255764461|r  146 ----------D-------------------G------------------------------QYYNAQHNPVQWMEEEGYF  166 (511)
Q Consensus       146 ----------~-------------------~------------------------------~~~~~~~~p~~~~~~~~~f  166 (511)
T Consensus       372 ~~~i~~~vd~~G~~~~~~~~~~g~~v~~~~G~~~~~a~~~Ii~~L~e~g~L~~~~~~~HsyP~~wR~~~Pvi~r~t~QWF  451 (966)
T PRK13804        372 RTAIPFTVDEDGFYTEDAPGFGGARVIDDKGKKYGDANKAVIEALIEAGLLLARGRLKHSYPHSWRSKKPVIFRNTPQWF  451 (966)
T ss_pred             CCCCCCCCCCCCEECCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEE
T ss_conf             35778756887606545600125542134687365627999999996799645564124776345678627996046147


Q ss_pred             CCCCC-------CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC----------------
Q ss_conf             46664-------4444344433332100067654577541034567532343337776578642----------------
Q gi|255764461|r  167 FRLSA-------YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD----------------  223 (511)
Q Consensus       167 ~~l~~-------~~~~l~~~~~~~~~~~~p~~~~~~~~~wl~~gl~Dw~ISR~~~~WGipiP~~----------------  223 (511)
T Consensus       452 i~~~~~~~~~~~lr~~~l~~i~~-v~-~~P~~~~~r~~~~l~~-~~DW~ISRQR-yWG~PIPi~~~e~~~~~~~~~~~~~  527 (966)
T PRK13804        452 ISMDKDLGDGGTLRSRALDAIKK-TR-FVPAAGQNRLRGMIED-RPDWVISRQR-AWGVPIPVFVDENGEILMDDEVNER  527 (966)
T ss_pred             EEECCCCCCHHHHHHHHHHHHHH-CC-CCCHHHHHHHHHCCCC-CCCCEEECCC-CCCCCCCEEECCCCCCCCCHHHHHH
T ss_conf             87353432138999999987654-35-0653434455512157-8676663113-4588751798379974457567789


Q ss_pred             ----------------------------------CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC
Q ss_conf             ----------------------------------2214646024443220012346765431000241100004564321
Q gi|255764461|r  224 ----------------------------------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR  269 (511)
Q Consensus       224 ----------------------------------~~~~~YVWfDa~~gY~s~~~~~~~~~~~~~~~w~~d~~~~G~Dii~  269 (511)
T Consensus       528 i~~~~~~~g~d~w~~~~~~~~~~~~~~~~~~~~r~~DvlD~WfdSgss------~~~~~~~~~~~~~PaD~y~eG~Dq~r  601 (966)
T PRK13804        528 IADAFEEEGADAWFAEGAKERFLGGFHPGEEWTKVTDILDVWFDSGST------HAFVLEDRPDLPWPADLYLEGSDQHR  601 (966)
T ss_pred             HHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHEECCCHHHHHHHCCCC------CCCCCCCHHHCCCCCCEEECCCCHHH
T ss_conf             999987618763334574765588878745507413114466515775------32011585445897416862541888


Q ss_pred             --HHCCHHHHHHHHHHHHCCCCCCCCCCEEE-CCCCCCHHHCCCCCCCCHHHHCCCCCCCHHHEEECCCCCCCEECCCCC
Q ss_conf             --00010247765433101232333430330-586010000022111000000221112111000024787301112221
Q gi|255764461|r  270 --FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL  346 (511)
Q Consensus       270 --Fh~i~~pa~l~~~~~~~p~~i~~~g~l~~-~G~KMSKS~GN~I~~~e~l~~~g~D~lR~~l~~~~~~~~D~~Fs~~~~  346 (511)
T Consensus       602 gWF~s~l~~s~~-~~~~~Pfk~v~~hG~VlDe~G~KMSKS~GNvvdP~~ii~~yGADalRl~~as-~~~~~d~~~~~~~l  679 (966)
T PRK13804        602 GWFHSSLLESCG-TRGRAPYKAVLTHGFTLDEKGEKMSKSLGNVVDPQDVIKQSGADILRLWVAS-VDYQDDQRIGKEIL  679 (966)
T ss_pred             HHHHHHHHHHHC-CCCCCCCCCEEECCEEECCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH-CCCCCCCCCCHHHH
T ss_conf             699999987422-0688774510341168988988887878898998999987292188899984-77544634568999


Q ss_pred             CCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH-
Q ss_conf             11001332110221021345565312332103----4555895565667899999999998775035899999999999-
Q gi|255764461|r  347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-  421 (511)
Q Consensus       347 ~~~~n~~L~~~lgN~~~R~~~f~~k~~~g~ip----~~~~~~~~D~~ll~~l~~~~~~v~~a~e~~~~~~Al~~i~~l~-  421 (511)
T Consensus       680 ~~~--~~~~~ki~N----t~rf~l~nl~~f~~~~~~~~~~l~~~D~wil~~l~~~~~~v~~~~~~Y~f~~a~~~l~~F~~  753 (966)
T PRK13804        680 KTN--AETYRKLRN----TLRWMLGTLAHFDPGEAVAYADLPELERLMLHRLNELDATVRKAYEAFDFKTIYKALVNFMT  753 (966)
T ss_pred             HHH--HHHHHHHHH----HHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999--999999999----99999986427983234892235287899999999999999998511359999999999999


Q ss_pred             -HHHHHHHHHHCCCHHHC--CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC-CCCCCCHHHHC
Q ss_conf             -99978865418701216--99999999999999999999998543224899999998498-80007955510
Q gi|255764461|r  422 -SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQSLD  490 (511)
Q Consensus       422 -~~~N~yi~~~~PW~l~k--~d~~~~~~vl~~~l~~l~~l~ilL~Pi~P~~ae~i~~~Lg~-~~~~~~~~~~~  490 (511)
T Consensus       754 ~dLs~~Yle~~Kd-rly~~~~~~~~rrsaq~~L~~il~~l~~llAPi~Pf~aEEiw~~~~~~~~~Sv~l~~~p  825 (966)
T PRK13804        754 VDLSAFYFDIRKD-ALYCDAPSSLRRKAALTVIYEIFDRLTKWLAPILPFTTEEAWLYRYPEEEVSVHLEQFP  825 (966)
T ss_pred             HHHHHHHHHHHHH-HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCC
T ss_conf             8787999988437-54057998399999999999999999999976728999999972557899876711489