HHsearch alignment for GI: 255764461 and conserved domain: PRK13804
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional.
Probab=100.00 E-value=0 Score=662.27 Aligned_cols=469 Identities=23% Similarity=0.354 Sum_probs=362.0
Q ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHC----CCC----------
Q ss_conf 888179978889999883222478978999999998858980362364370227999999983----999----------
Q gi|255764461|r 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA----GVT---------- 68 (511)
Q Consensus 3 ~~~~~~vt~~~Py~ng~lHlGH~~~~i~~D~~~R~~r~~G~~v~~~~g~D~hg~~i~~~A~~~----g~~---------- 68 (511)
T Consensus 52 ~~~~f~~~dGPPyanG~lH~GHaln~tikDii~Rykrm~G~~V~~~~GwD~hGLPiE~~vek~l~~~~~~~~~~~~~~f~ 131 (966)
T PRK13804 52 GRPKFVLHDGPPYANGNIHIGHALNKILKDVIVRSKQMLGFDANYVPGWDCHGLPIEWKIEEKYRAKGKNKDEVPLNEFR 131 (966)
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCHHHHH
T ss_conf 99976995799999998612255666899999999874899668999768887899999999776528982338999999
Q ss_pred --HHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHCCC
Q ss_conf --899999999999999998088988--6747788889999999988875431022110001011334301556672111
Q gi|255764461|r 69 --TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144 (511)
Q Consensus 69 --p~e~~~~~~~~~~~~~~~~~i~~D--~~~rT~~~~~~~~~~~~~~~l~~~G~iy~~~~~~~y~~~~~~~~~~~~v~~~ 144 (511)
T Consensus 132 ~~cr~~a~~~i~~~~~q~~rlG~~~DW~~~y~T~dp~y~~~~~~~F~~l~ekGliYr~~~pV~Wcp~~~TaLA~~EVey~ 211 (966)
T PRK13804 132 KECREYALSWIDVQREEFKRLGVIGDWENPYTTMDFHAEARIAREFMKFAAKGQLYRGSKPVMWSVVERTALAEAEVEYH 211 (966)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHCCC
T ss_conf 99999999999999999998292022589842289899999999999999879988438514768988866236754766
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 2-------------------------------------------------------------------------------
Q gi|255764461|r 145 A------------------------------------------------------------------------------- 145 (511)
Q Consensus 145 ~------------------------------------------------------------------------------- 145 (511)
T Consensus 212 d~~s~s~~v~f~v~~~~~~~~~~~~l~iwTTtPwTl~~n~avav~p~~~Y~~~~~~~~~~~~~~~~~~~~i~a~~l~e~~ 291 (966)
T PRK13804 212 DHESDTIWVKFPVKDGKGILLTGASVVIWTTTPWTIPANRAISYSPDIEYGLYEVTGAENDNWAKPGEKLVVADALAESV 291 (966)
T ss_pred CEECCEEEEEEEECCCCCCCCCCCCEEEEECCCCHHHCCCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHH
T ss_conf 78666699998734662000478706775078502202102024577643789950454211244551566547789999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q gi|255764461|r 146 -------------------------------------------------------------------------------- 145 (511)
Q Consensus 146 -------------------------------------------------------------------------------- 145 (511)
T Consensus 292 ~~~~~~~~~~~~~~~~G~~l~g~~~~~Pl~~~~~~~~~~~pi~~~d~V~~~~GTG~Vh~aPaHg~~Dy~~~~k~~L~~~~ 371 (966)
T PRK13804 292 AKKAGVESFERVRDVKADDLEAIVCAHPLKGLDGGYEFEVPVLDGDHVTDDAGTGFVHTAPGHGREDFEVWMKYGRELEV 371 (966)
T ss_pred HHHHCCCCEEEEEEECCCEECCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCC
T ss_conf 98737642278730015000476652666555666671578981683156778563775577887889999983987310
Q ss_pred ----------C-------------------C------------------------------CCCCCCCCCEECCCCCCCC
Q ss_conf ----------2-------------------2------------------------------2222233200003454434
Q gi|255764461|r 146 ----------D-------------------G------------------------------QYYNAQHNPVQWMEEEGYF 166 (511)
Q Consensus 146 ----------~-------------------~------------------------------~~~~~~~~p~~~~~~~~~f 166 (511)
T Consensus 372 ~~~i~~~vd~~G~~~~~~~~~~g~~v~~~~G~~~~~a~~~Ii~~L~e~g~L~~~~~~~HsyP~~wR~~~Pvi~r~t~QWF 451 (966)
T PRK13804 372 RTAIPFTVDEDGFYTEDAPGFGGARVIDDKGKKYGDANKAVIEALIEAGLLLARGRLKHSYPHSWRSKKPVIFRNTPQWF 451 (966)
T ss_pred CCCCCCCCCCCCEECCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEE
T ss_conf 35778756887606545600125542134687365627999999996799645564124776345678627996046147
Q ss_pred CCCCC-------CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC----------------
Q ss_conf 46664-------4444344433332100067654577541034567532343337776578642----------------
Q gi|255764461|r 167 FRLSA-------YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD---------------- 223 (511)
Q Consensus 167 ~~l~~-------~~~~l~~~~~~~~~~~~p~~~~~~~~~wl~~gl~Dw~ISR~~~~WGipiP~~---------------- 223 (511)
T Consensus 452 i~~~~~~~~~~~lr~~~l~~i~~-v~-~~P~~~~~r~~~~l~~-~~DW~ISRQR-yWG~PIPi~~~e~~~~~~~~~~~~~ 527 (966)
T PRK13804 452 ISMDKDLGDGGTLRSRALDAIKK-TR-FVPAAGQNRLRGMIED-RPDWVISRQR-AWGVPIPVFVDENGEILMDDEVNER 527 (966)
T ss_pred EEECCCCCCHHHHHHHHHHHHHH-CC-CCCHHHHHHHHHCCCC-CCCCEEECCC-CCCCCCCEEECCCCCCCCCHHHHHH
T ss_conf 87353432138999999987654-35-0653434455512157-8676663113-4588751798379974457567789
Q ss_pred ----------------------------------CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC
Q ss_conf ----------------------------------2214646024443220012346765431000241100004564321
Q gi|255764461|r 224 ----------------------------------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269 (511)
Q Consensus 224 ----------------------------------~~~~~YVWfDa~~gY~s~~~~~~~~~~~~~~~w~~d~~~~G~Dii~ 269 (511)
T Consensus 528 i~~~~~~~g~d~w~~~~~~~~~~~~~~~~~~~~r~~DvlD~WfdSgss------~~~~~~~~~~~~~PaD~y~eG~Dq~r 601 (966)
T PRK13804 528 IADAFEEEGADAWFAEGAKERFLGGFHPGEEWTKVTDILDVWFDSGST------HAFVLEDRPDLPWPADLYLEGSDQHR 601 (966)
T ss_pred HHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHEECCCHHHHHHHCCCC------CCCCCCCHHHCCCCCCEEECCCCHHH
T ss_conf 999987618763334574765588878745507413114466515775------32011585445897416862541888
Q ss_pred --HHCCHHHHHHHHHHHHCCCCCCCCCCEEE-CCCCCCHHHCCCCCCCCHHHHCCCCCCCHHHEEECCCCCCCEECCCCC
Q ss_conf --00010247765433101232333430330-586010000022111000000221112111000024787301112221
Q gi|255764461|r 270 --FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 (511)
Q Consensus 270 --Fh~i~~pa~l~~~~~~~p~~i~~~g~l~~-~G~KMSKS~GN~I~~~e~l~~~g~D~lR~~l~~~~~~~~D~~Fs~~~~ 346 (511)
T Consensus 602 gWF~s~l~~s~~-~~~~~Pfk~v~~hG~VlDe~G~KMSKS~GNvvdP~~ii~~yGADalRl~~as-~~~~~d~~~~~~~l 679 (966)
T PRK13804 602 GWFHSSLLESCG-TRGRAPYKAVLTHGFTLDEKGEKMSKSLGNVVDPQDVIKQSGADILRLWVAS-VDYQDDQRIGKEIL 679 (966)
T ss_pred HHHHHHHHHHHC-CCCCCCCCCEEECCEEECCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH-CCCCCCCCCCHHHH
T ss_conf 699999987422-0688774510341168988988887878898998999987292188899984-77544634568999
Q ss_pred CCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH-
Q ss_conf 11001332110221021345565312332103----4555895565667899999999998775035899999999999-
Q gi|255764461|r 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV- 421 (511)
Q Consensus 347 ~~~~n~~L~~~lgN~~~R~~~f~~k~~~g~ip----~~~~~~~~D~~ll~~l~~~~~~v~~a~e~~~~~~Al~~i~~l~- 421 (511)
T Consensus 680 ~~~--~~~~~ki~N----t~rf~l~nl~~f~~~~~~~~~~l~~~D~wil~~l~~~~~~v~~~~~~Y~f~~a~~~l~~F~~ 753 (966)
T PRK13804 680 KTN--AETYRKLRN----TLRWMLGTLAHFDPGEAVAYADLPELERLMLHRLNELDATVRKAYEAFDFKTIYKALVNFMT 753 (966)
T ss_pred HHH--HHHHHHHHH----HHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999--999999999----99999986427983234892235287899999999999999998511359999999999999
Q ss_pred -HHHHHHHHHHCCCHHHC--CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC-CCCCCCHHHHC
Q ss_conf -99978865418701216--99999999999999999999998543224899999998498-80007955510
Q gi|255764461|r 422 -SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQSLD 490 (511)
Q Consensus 422 -~~~N~yi~~~~PW~l~k--~d~~~~~~vl~~~l~~l~~l~ilL~Pi~P~~ae~i~~~Lg~-~~~~~~~~~~~ 490 (511)
T Consensus 754 ~dLs~~Yle~~Kd-rly~~~~~~~~rrsaq~~L~~il~~l~~llAPi~Pf~aEEiw~~~~~~~~~Sv~l~~~p 825 (966)
T PRK13804 754 VDLSAFYFDIRKD-ALYCDAPSSLRRKAALTVIYEIFDRLTKWLAPILPFTTEEAWLYRYPEEEVSVHLEQFP 825 (966)
T ss_pred HHHHHHHHHHHHH-HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCC
T ss_conf 8787999988437-54057998399999999999999999999976728999999972557899876711489