HHsearch alignment for GI: 255764461 and conserved domain: cd00808
>cd00808 GluRS_core Descriminating Glutamyl-tRNA synthetase (GluRS) catalytic core domain . The descriminating form of GluRS is only found in bacteria and cellular organelles. GluRS is a monomer, that attaches Glu to the appropriate tRNA. Like other class I tRNA synthetases, GluRS aminoacylates the 2'-OH of the nucleotide at the 3' end of the tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding.
Probab=97.84 E-value=6.8e-05 Score=55.27 Aligned_cols=63 Identities=22% Similarity=0.284 Sum_probs=48.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 89999883222478978999999998858980362364370227999999983999899999999999999998088988
Q gi|255764461|r 13 IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92 (511)
Q Consensus 13 ~Py~ng~lHlGH~~~~i~~D~~~R~~r~~G~~v~~~~g~D~hg~~i~~~A~~~g~~p~e~~~~~~~~~~~~~~~~~i~~D 92 (511)
T Consensus 7 APsPtG~LHiG~~rtal~n~l~Ar~--~~G~f~LRieDtD~----------------~R~~~e~~~~I~~dL~wLGl~wD 68 (239)
T cd00808 7 APSPTGYLHIGGARTALFNYLFAKK--HGGKFILRIEDTDQ----------------ERSVEEAEEAILEDLKWLGIDWD 68 (239)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHH--HCCEEEEEECCCCC----------------CCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 8898985338999999999999998--19989998456898----------------87876999999999998188877
Q ss_pred C
Q ss_conf 6
Q gi|255764461|r 93 D 93 (511)
Q Consensus 93 ~ 93 (511)
T Consensus 69 e 69 (239)
T cd00808 69 E 69 (239)
T ss_pred C
T ss_conf 4