BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|255764461|ref|YP_003064629.2| methionyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] (511 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done Results from round 1 >gi|255764461|ref|YP_003064629.2| methionyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] gi|254547812|gb|ACT56689.2| methionyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] Length = 511 Score = 1060 bits (2741), Expect = 0.0, Method: Compositional matrix adjust. Identities = 511/511 (100%), Positives = 511/511 (100%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK Sbjct: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY Sbjct: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY Sbjct: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT Sbjct: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG Sbjct: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN Sbjct: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL Sbjct: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA Sbjct: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL Sbjct: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 >gi|315122341|ref|YP_004062830.1| methionyl-tRNA synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495743|gb|ADR52342.1| methionyl-tRNA synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 512 Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust. Identities = 413/510 (80%), Positives = 462/510 (90%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K REK YISTAIAYPNA+PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDE+GQKIAK+ Sbjct: 3 KGREKFYISTAIAYPNAKPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEYGQKIAKS 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 AQNAG+ TK+FVDQNS +FR MADV ISYDDFIRTTEKRHHDTCRILW+KI DKGDIYK Sbjct: 63 AQNAGIETKIFVDQNSADFRQMADVFGISYDDFIRTTEKRHHDTCRILWQKILDKGDIYK 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 G YSGWYSLRDE Y DDEVYKG DGQ+YNAQ NPVQWMEEEGYFFRLSAYQDKLL+YY+ Sbjct: 123 GFYSGWYSLRDEMYCGDDEVYKGEDGQHYNAQKNPVQWMEEEGYFFRLSAYQDKLLAYYD 182 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 SHPEFILP+ERRNE++SFVKSGLKDLS+SRKTFDWGIKIP+DPQYIMYVWIDALTNYLT Sbjct: 183 SHPEFILPLERRNEIVSFVKSGLKDLSISRKTFDWGIKIPNDPQYIMYVWIDALTNYLTA 242 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 TG L +P+G KAKFWPADLHVIGKDI+RFHA+YWPAFLLSANLPLPK +FSHGFIL+KGE Sbjct: 243 TGLLPHPNGEKAKFWPADLHVIGKDIVRFHAVYWPAFLLSANLPLPKTIFSHGFILNKGE 302 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 KISKSLGNVIDP+EVI+E+GVDALRYFL+R+IACGKDGFYD + +K RVNADLANGIGNL Sbjct: 303 KISKSLGNVIDPMEVIKEIGVDALRYFLIRDIACGKDGFYDINTVKNRVNADLANGIGNL 362 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 VSRS+SMI+K+Y G++P PG F E D+ IL CS+ +QEIRE+M QLIHRA+AQVIS+V Sbjct: 363 VSRSISMIVKNYGGVMPNPGVFVEFDKEILYACSQNIQEIREHMDGQLIHRAVAQVISIV 422 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 SEVDRYF QKPW+L KT+ DRA+TVLYVTV+V+RQLAILLQ FVP +ANKIFDIL +AD Sbjct: 423 SEVDRYFATQKPWDLVKTDRDRAATVLYVTVDVVRQLAILLQPFVPGMANKIFDILSIAD 482 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 ENR F LDQRLK G ++ K F P+FPRFL Sbjct: 483 ENRSFAHLDQRLKVGLVIDKDFMPLFPRFL 512 >gi|15888821|ref|NP_354502.1| methionyl-tRNA synthetase [Agrobacterium tumefaciens str. C58] gi|25009368|sp|Q8UFA2|SYM_AGRT5 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|15156579|gb|AAK87287.1| methionyl-tRNA synthetase [Agrobacterium tumefaciens str. C58] Length = 516 Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust. Identities = 300/513 (58%), Positives = 399/513 (77%), Gaps = 3/513 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ YI+TAI+YPN +PHIGHAYE+I D +ARF RLDG+DV F TGTDEHGQK+ + Sbjct: 1 MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGMDVFFLTGTDEHGQKMQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G++ + +NS FR+M +L+ S DDFIRTTE+RHH+T R +W ++D GDIY Sbjct: 61 TARAEGISPEELAQRNSDQFREMGKLLNASNDDFIRTTEERHHETSRNIWNLMADSGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y+GWYS+RDEAYY +DE ADG Y Q PV+W+EEE YFF+LS YQ+KLL Y Sbjct: 121 KDSYAGWYSVRDEAYYAEDETEVRADGVRYGPQGTPVEWVEEESYFFKLSEYQEKLLKLY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E +P+FI P ERRNE+ISFVKSGLKDLS+SR TFDWGIK+PDDP+++MYVW+DALTNY+T Sbjct: 181 EENPDFIGPAERRNEIISFVKSGLKDLSISRTTFDWGIKVPDDPKHVMYVWVDALTNYIT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+V++HGF+L+KG Sbjct: 241 ATGYIEDRNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVYAHGFLLNKG 300 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKSLGNV+DP ++ G+D +RYF +RE++ G+DG Y ++G+ R+NADLANGIGN Sbjct: 301 EKMSKSLGNVVDPANLVAHFGLDPVRYFFMREVSFGQDGSYSEEGIATRINADLANGIGN 360 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SRS+SMI+K+ DG IPTPGAF + D+++L+ +L RE M QLIHRALA +I++ Sbjct: 361 LASRSLSMIVKNCDGQIPTPGAFNDDDKAMLASADGLLAVCREEMGKQLIHRALAAIIAV 420 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 VSE DRYF +Q+PW LKKT+P+R TVLYVT EV+RQ+ ILLQ F+P+ K+ D++ Sbjct: 421 VSETDRYFASQEPWALKKTDPERMGTVLYVTAEVVRQIGILLQPFMPQSCEKLLDLVAAP 480 Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 + R F +L + RL PG L P+FPR++ Sbjct: 481 ADGRDFTALGEAGRLAPGTPLEAP-KPVFPRYV 512 >gi|325292849|ref|YP_004278713.1| Methionyl-tRNA synthetase [Agrobacterium sp. H13-3] gi|325060702|gb|ADY64393.1| Methionyl-tRNA synthetase [Agrobacterium sp. H13-3] Length = 516 Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust. Identities = 300/513 (58%), Positives = 398/513 (77%), Gaps = 3/513 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ YI+TAI+YPN +PHIGHAYE+I D +ARF RLDG+DV F TGTDEHGQK+ + Sbjct: 1 MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGMDVFFLTGTDEHGQKMQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G++ + +NS FR+M +L+ S DDFIRTTE+RHH+T R +W ++D GDIY Sbjct: 61 TARAEGISPEELAQRNSDQFREMGKLLNASNDDFIRTTEERHHETSRNIWNLMADSGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y+GWYS+RDEAYY +DE ADG Y Q PV+W+EEE YFF+LS YQDKLL Y Sbjct: 121 KDSYAGWYSVRDEAYYGEDETEVRADGVRYGPQGTPVEWVEEESYFFKLSEYQDKLLKLY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E +P+FI P ERRNE+ISFVKSGLKDLS+SR TFDWGIK+PDDP+++MYVW+DALTNY+T Sbjct: 181 EENPDFIGPAERRNEIISFVKSGLKDLSISRTTFDWGIKVPDDPKHVMYVWVDALTNYIT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+V++HGF+L+KG Sbjct: 241 ATGYIEDKNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVYAHGFLLNKG 300 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKSLGNV+DP+ ++ G+D +RYF +RE++ G+DG Y ++G+ R+NADLANGIGN Sbjct: 301 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFMREVSFGQDGSYSEEGIATRINADLANGIGN 360 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SRS+SMI+K+ DG IPTPG T+ D+++L+ +L RE M QLIHRALA +I++ Sbjct: 361 LASRSLSMIVKNCDGQIPTPGPLTDEDKAMLASADGLLALCREEMGKQLIHRALAAIIAV 420 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 VSE DRYF +Q+PW LKKT+P+R TVLYVT EV+RQ+ ILLQ F+P K+ D++ Sbjct: 421 VSETDRYFASQEPWALKKTDPERMGTVLYVTAEVVRQIGILLQPFMPGSCEKLLDLVAAP 480 Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 + R F +L + RL PG L P+FPR++ Sbjct: 481 ADKRDFAALGEAGRLVPGTPLEAP-KPVFPRYV 512 >gi|227822152|ref|YP_002826123.1| methionyl-tRNA synthetase [Sinorhizobium fredii NGR234] gi|227341152|gb|ACP25370.1| methionyl-tRNA synthetase [Sinorhizobium fredii NGR234] Length = 516 Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust. Identities = 304/513 (59%), Positives = 396/513 (77%), Gaps = 3/513 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M++ YI+TAI+YPN +PHIGHAYE+I D +AR+ RLDG +V F TGTDEHGQK+ + Sbjct: 1 MRDTSPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGREVFFLTGTDEHGQKMQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GV+ + D+NS F MA+VL+ S DDFIRTTEKRHH+ + +W ++ + GD+Y Sbjct: 61 TARKEGVSPQELADRNSAEFEKMAEVLNASNDDFIRTTEKRHHEASQAIWIRMGEAGDLY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y+GWYS+RDEAYY ++E DG Y Q PV+W+EEE YFFRLSAYQDKLL +Y Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRDDGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLKHY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E +P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGI++P+DP ++MYVW+DALTNYLT Sbjct: 181 EDNPDFIGPSERRNEVISFVKSGLKDLSVSRTTFDWGIRVPNDPAHVMYVWVDALTNYLT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TGYL +P G +AKFWPA++HVIGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG Sbjct: 241 ATGYLTDPSGPRAKFWPANIHVIGKDIIRFHAVYWPAFLMSAGLPLPKRVFAHGFLLNKG 300 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKSLGNV+DP ++E G+D +RYF +RE++ G+DG Y ++G+ R+N+DLANGIGN Sbjct: 301 EKMSKSLGNVVDPFNLVEHFGLDQIRYFFLREVSFGQDGSYSEEGIATRINSDLANGIGN 360 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SRS+SMI+K+ DG IP G TE DE++L+ +++ RE M QLIHRALA +I++ Sbjct: 361 LASRSLSMIVKNCDGQIPACGPLTEEDEAMLAAADALIETTREEMGRQLIHRALAAIIAV 420 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 VSE DRYF Q+PW LKKT+P+R +TVLYVT EV+RQ+AILLQ F+P A K+ D++ V Sbjct: 421 VSETDRYFAGQEPWALKKTDPERMATVLYVTAEVVRQIAILLQPFMPDSAGKLLDLVAVP 480 Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 E R F L + RL G L P+FPR++ Sbjct: 481 AEKRDFVHLGKSGRLVSGTPLEAP-KPVFPRYI 512 >gi|150396508|ref|YP_001326975.1| methionyl-tRNA synthetase [Sinorhizobium medicae WSM419] gi|150028023|gb|ABR60140.1| methionyl-tRNA synthetase [Sinorhizobium medicae WSM419] Length = 516 Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust. Identities = 298/513 (58%), Positives = 395/513 (76%), Gaps = 3/513 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M++ YI+TAI+YPN +PHIGHAYE+I D +ARF RLDG +V F TGTDEHGQK+ + Sbjct: 1 MRDTSPFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGREVFFLTGTDEHGQKMQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G++ + +NS F++MA +L+ S DDFIRTTEKRHH+ + +W ++ + GD+Y Sbjct: 61 TAKKEGISPQELAARNSAEFQNMARLLNASNDDFIRTTEKRHHEASQAIWTRMGEAGDLY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y+GWYS+RDEAYY ++E DG Y Q PV+W+EEE YFFRLSAYQD+LL +Y Sbjct: 121 KDSYAGWYSVRDEAYYQENETELREDGLRYGPQGTPVEWVEEESYFFRLSAYQDRLLKHY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E +P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T Sbjct: 181 EENPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPAHVMYVWVDALTNYVT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TGYL +P G +AKFWPA++HVIGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG Sbjct: 241 ATGYLTDPTGPRAKFWPANIHVIGKDIIRFHAVYWPAFLMSAGLPLPKRVFAHGFLLNKG 300 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKSLGNV+DP ++E G+D +RYF +RE++ G+DG Y ++G+ R+N+DLANGIGN Sbjct: 301 EKMSKSLGNVVDPFNLVEHFGLDQIRYFFLREVSFGQDGSYSEEGIATRINSDLANGIGN 360 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SRS+SMI+K+ DG IP G T+ D+++L+ +++ RE M QLIHRALA I++ Sbjct: 361 LASRSLSMIVKNCDGQIPVCGPLTDEDKAMLAAADSLIETAREEMGRQLIHRALAATIAI 420 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 VSE DRYF Q+PW LKKT+P+R +TVLYVT EV+RQ+AILLQ F+P A K+ D++ V Sbjct: 421 VSETDRYFAGQEPWALKKTDPNRMATVLYVTAEVVRQVAILLQPFMPDSAGKLLDLVAVP 480 Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 + R F L + RL G L P+FPR++ Sbjct: 481 ADRRDFAHLGEGGRLVSGTPLEAP-KPVFPRYV 512 >gi|116252220|ref|YP_768058.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] gi|115256868|emb|CAK07962.1| putative methionyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] Length = 516 Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust. Identities = 295/513 (57%), Positives = 397/513 (77%), Gaps = 3/513 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ YI+TAI+YPN +PHIGHAYE+I D +AR+ RLDG DV F TGTDEHGQK+ + Sbjct: 1 MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGKDVFFLTGTDEHGQKMQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + D+NS F+ MA +L+ S DDFIRTT++RHH+T R +WK ++D GDIY Sbjct: 61 TARAEGITAQALADRNSGEFQAMATLLNASNDDFIRTTQERHHETSRNIWKLMADSGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EE YFF+LS YQ+KLL++Y Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQEKLLAHY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T Sbjct: 181 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPAHVMYVWVDALTNYIT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG Sbjct: 241 ATGYIEDKNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG 300 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKSLGNV+DP+ ++ G+D +RYF +RE++ G+DG Y ++ ++ R+N+DLANGIGN Sbjct: 301 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIRTRINSDLANGIGN 360 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SRS+SMI+K+ DG IP GA + D ++L+ + RE+M Q IHRALA +IS+ Sbjct: 361 LASRSLSMIVKNCDGKIPECGALNDEDRAMLAEVDALHASTREDMGKQQIHRALASIISV 420 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 VSE DRYF Q PW LKKT+P+R TVLYVT EV+RQ+AILLQ F+P+ + K+ D++ A Sbjct: 421 VSETDRYFAGQAPWALKKTDPERMGTVLYVTAEVVRQIAILLQPFMPESSAKLLDLVAAA 480 Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 + R F +L + RL G L P+FPR++ Sbjct: 481 ADKRDFAALGEAGRLVAGTALEAP-TPVFPRYV 512 >gi|15965354|ref|NP_385707.1| methionyl-tRNA synthetase [Sinorhizobium meliloti 1021] gi|307312729|ref|ZP_07592360.1| methionyl-tRNA synthetase [Sinorhizobium meliloti BL225C] gi|25009383|sp|Q92PX0|SYM_RHIME RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|15074534|emb|CAC46180.1| Probable methionyl-tRNA synthetase (methionine--tRNA ligase) [Sinorhizobium meliloti 1021] gi|306899454|gb|EFN30086.1| methionyl-tRNA synthetase [Sinorhizobium meliloti BL225C] Length = 516 Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust. Identities = 296/513 (57%), Positives = 394/513 (76%), Gaps = 3/513 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M++ YI+TAI+YPN +PHIGHAYE+I D +ARF RLDG +V F TGTDEHGQK+ + Sbjct: 1 MRDTSPFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGREVFFLTGTDEHGQKMQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G++ + +NS F++MA +L+ S DDFIRTTE+RHH+ + +W ++ + GD+Y Sbjct: 61 TAKKEGISPQELAARNSAEFQNMARLLNASNDDFIRTTEQRHHEASQAIWMRMGEAGDLY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y+GWYS+RDEAYY ++E DG Y Q PV+W+EEE YFFRLSAYQDKLL +Y Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRGDGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLKHY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E +P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T Sbjct: 181 EENPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYVT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TG L +P G +AKFWPA++HVIGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG Sbjct: 241 ATGCLTDPTGPRAKFWPANIHVIGKDIIRFHAVYWPAFLMSAGLPLPKRVFAHGFLLNKG 300 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKSLGNV+DP ++E G+D +RYF +RE++ G+DG Y ++G+ R+N+DLANGIGN Sbjct: 301 EKMSKSLGNVVDPFNLVEHFGLDQIRYFFLREVSFGQDGSYSEEGIATRINSDLANGIGN 360 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SRS+SMI+K+ DG +P G T+ D+++L+ ++ RE M QLIHRALA +I++ Sbjct: 361 LASRSLSMIVKNCDGQVPLCGPLTDEDKAMLAAADSLIGTAREEMGKQLIHRALAAIIAV 420 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 VSE DRYF Q+PW LKKT+P R +TVLYVT EV+RQ+AILLQ F+P+ A K+ D++ V Sbjct: 421 VSETDRYFAGQEPWALKKTDPSRMATVLYVTAEVVRQVAILLQPFMPESAGKLLDLVAVP 480 Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 + R F L + RL G L P+FPR++ Sbjct: 481 TDRRDFAHLGEAGRLVSGTPLEAP-KPVFPRYV 512 >gi|307317213|ref|ZP_07596654.1| methionyl-tRNA synthetase [Sinorhizobium meliloti AK83] gi|306897301|gb|EFN28046.1| methionyl-tRNA synthetase [Sinorhizobium meliloti AK83] Length = 516 Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust. Identities = 296/513 (57%), Positives = 394/513 (76%), Gaps = 3/513 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M++ YI+TAI+YPN +PHIGHAYE+I D +ARF RLDG +V F TGTDEHGQK+ + Sbjct: 1 MRDTSPFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGREVFFLTGTDEHGQKMQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G++ + +NS F++MA +L+ S DDFIRTTE+RHH+ + +W ++ + GD+Y Sbjct: 61 TAKKEGISPQELAARNSAEFQNMARLLNASNDDFIRTTEQRHHEASQAIWMRMGEAGDLY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y+GWYS+RDEAYY ++E DG Y Q PV+W+EEE YFFRLSAYQDKLL +Y Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRGDGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLKHY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E +P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T Sbjct: 181 EENPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYVT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TG L +P G +AKFWPA++HVIGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG Sbjct: 241 ATGCLTDPTGPRAKFWPANIHVIGKDIIRFHAVYWPAFLMSAGLPLPKRVFAHGFLLNKG 300 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKSLGNV+DP ++E G+D +RYF +RE++ G+DG Y ++G+ R+N+DLANGIGN Sbjct: 301 EKMSKSLGNVVDPFTLVEHFGLDQIRYFFLREVSFGQDGSYSEEGIATRINSDLANGIGN 360 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SRS+SMI+K+ DG +P G T+ D+++L+ ++ RE M QLIHRALA +I++ Sbjct: 361 LASRSLSMIVKNCDGQVPLCGPLTDEDKAMLAAADSLIGTAREEMGKQLIHRALAAIIAV 420 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 VSE DRYF Q+PW LKKT+P R +TVLYVT EV+RQ+AILLQ F+P+ A K+ D++ V Sbjct: 421 VSETDRYFAGQEPWALKKTDPIRMATVLYVTAEVVRQVAILLQPFMPESAGKLLDLVAVP 480 Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 + R F L + RL G L P+FPR++ Sbjct: 481 TDRRDFAHLGEAGRLVSGTPLEAP-KPVFPRYV 512 >gi|241204713|ref|YP_002975809.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858603|gb|ACS56270.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 516 Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust. Identities = 294/513 (57%), Positives = 395/513 (76%), Gaps = 3/513 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ YI+TAI+YPN +PHIGHAYE+I D +AR+ RLDG DV F TGTDEHGQK+ + Sbjct: 1 MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGKDVFFLTGTDEHGQKMQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + D+NS F+ MA +L+ S DDFIRTT++RHH+T R +WK ++D GDIY Sbjct: 61 TARAEGITAQALADRNSGEFQAMATLLNASNDDFIRTTQERHHETSRNIWKLMADNGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EE YFF+LS YQ+KLL++Y Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQEKLLAHY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+PDDP ++MYVW+DALTNY+T Sbjct: 181 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPDDPAHVMYVWVDALTNYIT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG Sbjct: 241 ATGYIEDKNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG 300 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKSLGNV+DP+ ++ G+D +RYF +RE++ G+DG Y ++ + R+N+DLANGIGN Sbjct: 301 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIGTRINSDLANGIGN 360 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SRS+SMI+K+ DG IP GA ++ D+++L+ + RE M Q IHRALA +IS+ Sbjct: 361 LASRSLSMIVKNCDGKIPECGALSDEDKAMLAEVDALHASTREEMGKQQIHRALASIISV 420 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 VSE DRYF Q PW LKKT+P+R TVLYVT EV+RQ+AILL+ F+P + K+ D++ Sbjct: 421 VSETDRYFAGQAPWALKKTDPERMGTVLYVTAEVVRQIAILLRPFMPDSSGKLLDLVAAP 480 Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 + R F +L + RL G L P+FPR++ Sbjct: 481 ADKRDFAALGEAGRLTAGTTLEAP-TPVFPRYV 512 >gi|327193417|gb|EGE60316.1| methionyl-tRNA synthetase protein [Rhizobium etli CNPAF512] Length = 519 Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 293/513 (57%), Positives = 391/513 (76%), Gaps = 3/513 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ YI+TAI+YPN +PHIGHAYE+I D +AR+ RLDG DV F TGTDEHGQK+ + Sbjct: 4 MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGRDVFFLTGTDEHGQKMQQ 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + D+NS F MA +L+ S DDFIRTT++RHH+T R +W +++ GDIY Sbjct: 64 TARAEGITAQALADRNSGEFEAMAKLLNASNDDFIRTTQERHHETSRNIWNLMAENGDIY 123 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EE YFF+LS YQDKLL++Y Sbjct: 124 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQDKLLAHY 183 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T Sbjct: 184 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYIT 243 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG Sbjct: 244 ATGYIEDRNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG 303 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKSLGNV+DP+ ++ G+D +RYF +RE++ G+DG Y ++ + R+N+DLANGIGN Sbjct: 304 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIGTRINSDLANGIGN 363 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SRS+SMI+K+ DG IP G ++ DE +L+ + RE+M Q IHRALA +I++ Sbjct: 364 LASRSLSMIVKNCDGKIPECGPLSDEDEVMLAQADALHASTREDMGKQQIHRALASIIAV 423 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 VSE DRYF Q PW LKKT+P R TVLYVT EV+RQ+AILLQ F+P + K+ DI+ Sbjct: 424 VSETDRYFAGQAPWALKKTDPARMGTVLYVTAEVVRQIAILLQPFMPDSSGKLLDIVAAP 483 Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 + R F +L + RL G L P+FPR++ Sbjct: 484 ADKRAFAALGEAGRLVAGTPLEAP-TPVFPRYV 515 >gi|190891834|ref|YP_001978376.1| methionyl-tRNA synthetase protein [Rhizobium etli CIAT 652] gi|190697113|gb|ACE91198.1| methionyl-tRNA synthetase protein [Rhizobium etli CIAT 652] Length = 516 Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust. Identities = 291/513 (56%), Positives = 394/513 (76%), Gaps = 3/513 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ YI+TAI+YPN +PHIGHAYE+I D +AR+ RLDG DV F TGTDEHGQK+ + Sbjct: 1 MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGRDVFFLTGTDEHGQKMQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + D+NS F+ MA +L+ S DDFIRTT++RHH+T R +W +++ GDIY Sbjct: 61 TARAEGITAQALADRNSGEFQAMAKLLNASNDDFIRTTQERHHETSRNIWNLMAENGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EE YFF+LS YQDKLL++Y Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQDKLLAHY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T Sbjct: 181 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYIT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL++A LPLPK+VF+HGF+L+KG Sbjct: 241 ATGYIEDRNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMAAKLPLPKRVFAHGFLLNKG 300 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKSLGNV+DP+ ++ G+D +RYF +RE++ G+DG Y ++ + R+N+DLANGIGN Sbjct: 301 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIGTRINSDLANGIGN 360 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SRS+SMI+K+ DG IP GA ++ D+++L+ + RE+M Q IHRALA +I++ Sbjct: 361 LASRSLSMIVKNCDGKIPECGALSDEDKAMLAQADALHASTREDMGKQQIHRALASIIAV 420 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 VSE DRYF Q PW LKKT+P R TVLYVT EV+RQ+AILLQ F+P + K+ D++ Sbjct: 421 VSETDRYFAGQAPWALKKTDPVRMGTVLYVTAEVVRQIAILLQPFMPDSSGKLLDLVAAP 480 Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 + R F +L + RL G L P+FPR++ Sbjct: 481 ADKRDFAALGEAGRLVAGTPLEAP-TPVFPRYV 512 >gi|86357775|ref|YP_469667.1| methionyl-tRNA synthetase [Rhizobium etli CFN 42] gi|86281877|gb|ABC90940.1| methionyl-tRNA synthetase protein [Rhizobium etli CFN 42] Length = 516 Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust. Identities = 291/513 (56%), Positives = 393/513 (76%), Gaps = 3/513 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ YI+TAI+YPN +PHIGHAYE+I D +AR+ RLDG DV F TGTDEHGQK+ + Sbjct: 1 MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGRDVFFLTGTDEHGQKMQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + D+NS F+ MA +L+ S DDFIRTT++RHH+T R +W ++D GDIY Sbjct: 61 TARAEGIAPQALADRNSGEFQAMAKLLNASNDDFIRTTQERHHETSRNIWNLMADNGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EE YFF+LS YQDKLL++Y Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQDKLLAHY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T Sbjct: 181 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYIT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLP++VF+HGF+L+KG Sbjct: 241 ATGYIEDRNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPQRVFAHGFLLNKG 300 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKSLGNV+DP+ ++ G+D +RYF +RE++ G+DG Y ++ + R+N+DLANGIGN Sbjct: 301 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIGTRINSDLANGIGN 360 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SRS+SMI+K+ DG IP G T+ D+++L+ + RE+M Q IHRALA +I++ Sbjct: 361 LASRSLSMIVKNCDGKIPECGPLTDEDKAMLAQADALHASTREDMGKQQIHRALASIIAV 420 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 VSE DRYF Q PW LKKT+P R TVLYVT EV+RQ+AILLQ F+P+ + K+ D++ Sbjct: 421 VSETDRYFAGQAPWALKKTDPARMGTVLYVTAEVVRQIAILLQPFMPESSGKLLDLVAAP 480 Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 + R F +L + RL G L P+FPR++ Sbjct: 481 ADKRDFAALGEAGRLVAGTPLEAP-TPVFPRYV 512 >gi|209549396|ref|YP_002281313.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535152|gb|ACI55087.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 516 Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust. Identities = 290/513 (56%), Positives = 393/513 (76%), Gaps = 3/513 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ YI+TAI+YPN +PHIGHAYE+I D +AR+ RLDG DV F TGTDEHGQK+ + Sbjct: 1 MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGRDVFFLTGTDEHGQKMQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + D+NS F+ MA +L+ S DDFIRTT++RHH+T R +W +++ GDIY Sbjct: 61 TARAEGITAQALADRNSGEFQAMAKLLNASNDDFIRTTQERHHETSRNIWNLMAENGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EE YFF+LS YQ+KLL++Y Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQEKLLAHY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T Sbjct: 181 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPAHVMYVWVDALTNYIT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG Sbjct: 241 ATGYIEDRNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG 300 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKSLGNV+DP+ ++ G+D +RYF +RE++ G+DG Y ++ + R+N+DLANGIGN Sbjct: 301 EKMSKSLGNVVDPVNLVSHFGLDQVRYFFLREVSFGQDGSYSEEAIGIRINSDLANGIGN 360 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SRS+SMI+K+ DG IP G ++ D+++L+ + R++M Q IHRALA +IS+ Sbjct: 361 LASRSLSMIVKNCDGKIPECGVLSDEDKAMLAQADALHASTRDDMGKQQIHRALASIISV 420 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 VSE DRYF Q PW LKKT+P R TVLYVT EV+RQ+AILLQ F+P + K+ D++ Sbjct: 421 VSETDRYFAGQAPWALKKTDPARMGTVLYVTAEVVRQIAILLQPFMPDSSGKLLDLVAAP 480 Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 + R F +L + RL G L P+FPR++ Sbjct: 481 ADKRDFAALGESGRLLAGTPLEAP-TPVFPRYV 512 >gi|222086010|ref|YP_002544542.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84] gi|221723458|gb|ACM26614.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84] Length = 517 Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust. Identities = 292/513 (56%), Positives = 393/513 (76%), Gaps = 3/513 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+TAIAYPN +PHIGHAYE+I D +ARF RLDG DV F TGTDEHGQK+ + Sbjct: 1 MTEKTPFYITTAIAYPNGKPHIGHAYELIATDAMARFQRLDGRDVFFLTGTDEHGQKMQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G++ + D+NS F+ M +L+ S DD+IRTTE+RHH+T R +W ++D GDIY Sbjct: 61 TARAEGLSPQELADRNSAEFQAMGKLLNSSNDDYIRTTEERHHETSRNIWNLMADAGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y+GWYS+RDEAYY ++E ADG Y Q PV+W++EE YFF+LS YQD+LL Y Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVQEESYFFKLSEYQDRLLKLY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E +P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T Sbjct: 181 EENPDFIGPAERRNEVISFVKSGLKDLSISRTTFDWGIKVPNDPAHVMYVWVDALTNYIT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TGY+++ + +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG Sbjct: 241 ATGYIEDRNNPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG 300 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKSLGNV+DP+ ++ G+D +RYF +RE++ G+DG Y ++ + R+N+DLANGIGN Sbjct: 301 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIGTRINSDLANGIGN 360 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SRS+SMI+K+ DG IP G TE D+++L+ +L RE+M Q +HRALA +I++ Sbjct: 361 LASRSLSMIVKNCDGKIPECGELTEEDKALLAQADALLASTREDMGKQALHRALASIIAV 420 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 VSE DRYF Q+PW LKKT+P R +TVLYVT +V+RQ+ ILLQ F+P + K+ D++ + Sbjct: 421 VSESDRYFAGQEPWALKKTDPARMATVLYVTADVVRQIGILLQPFMPDSSTKLLDLIAIP 480 Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 + R F +L + RL PG L P+FPR++ Sbjct: 481 SDKRDFAALGEAGRLVPGTPLEAP-KPVFPRYV 512 >gi|222148592|ref|YP_002549549.1| methionyl-tRNA synthetase [Agrobacterium vitis S4] gi|221735578|gb|ACM36541.1| methionyl-tRNA synthetase [Agrobacterium vitis S4] Length = 525 Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust. Identities = 291/510 (57%), Positives = 382/510 (74%), Gaps = 3/510 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+TAI+YPN +PHIGHAYE+I D +ARF RLDG DV F TGTDEHGQK+ + A+ Sbjct: 2 KDTFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGKDVFFLTGTDEHGQKMQQTAR 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 N G+ + +NS FR M +L+ S DDFIRTTE RHH + +WK++ GDIYK Sbjct: 62 NEGIAPEELAKRNSDEFRAMGKLLNASNDDFIRTTEARHHAASQEIWKRMEKNGDIYKDS 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY +DE ADG Y Q PV+W+EEE YFFRLSAY+DKLL YE Sbjct: 122 YAGWYSVRDEAYYAEDETEMRADGVRYGPQGTPVEWVEEESYFFRLSAYEDKLLKLYEDQ 181 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P ERRNEV+SFVKSGLKDLS+SR TFDWGIK+P D +++MYVW+DALTNY+T TG Sbjct: 182 PDFIGPNERRNEVLSFVKSGLKDLSMSRTTFDWGIKVPGDDKHVMYVWVDALTNYITATG 241 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 YL + +G +AK+WPAD H+IGKDI+RFHA+YWPAFLLSA + LPK++F+HGF+L+KGEK+ Sbjct: 242 YLTDENGPRAKYWPADAHIIGKDIIRFHAVYWPAFLLSAGVALPKRIFAHGFVLNKGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNV+DP +++++ G+D +RYFL REI+ G+DG + + + R+NADLANGIGNL S Sbjct: 302 SKSLGNVVDPFDLLQQFGLDNVRYFLCREISFGQDGNCNAELIAPRINADLANGIGNLAS 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ DG +P PG TE+DE+IL+ + RE M Q IH+A+ ++++V+E Sbjct: 362 RSLSMIAKNLDGKVPQPGPLTEADEAILATADEAIAICREEMSRQQIHKAVGAIMNIVNE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 DRYF AQ PW L+KT+ R TVLYVT EV+RQ+AIL Q +P A K+ D++ +A ++ Sbjct: 422 ADRYFAAQAPWVLRKTDVPRMETVLYVTAEVVRQIAILFQPIMPDSAAKLLDLVAIAPDD 481 Query: 484 RCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 R F L + RL PG L P+FPR++ Sbjct: 482 RVFAKLGKAGRLTPGTEL-PAVSPVFPRYV 510 >gi|239831997|ref|ZP_04680326.1| methionyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] gi|239824264|gb|EEQ95832.1| methionyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] Length = 525 Score = 622 bits (1603), Expect = e-176, Method: Compositional matrix adjust. Identities = 281/508 (55%), Positives = 373/508 (73%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G DV F TGTDEHG K+ ++A+ Sbjct: 15 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGKDVFFLTGTDEHGIKMLQSAR 74 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MADVL+ S DD+IRT+E+RH+ + +WK ++D GDIYKG Sbjct: 75 KEGITPRELADRNTAAFRQMADVLNSSNDDYIRTSEERHYKASQAIWKAMADNGDIYKGG 134 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E DG Y Q PV+W+EEE YFFRLS+YQD+LL YE + Sbjct: 135 YAGWYSVRDEAYYGEEETEVREDGVRYGPQGTPVEWVEEESYFFRLSSYQDRLLDLYEQN 194 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 195 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 254 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D DG K +WPAD H+IGKDI RFHA+YWPAFL+SA +PLPK+VF+HGF+ ++GEK+ Sbjct: 255 YPDTTDG-KWGYWPADAHIIGKDISRFHAVYWPAFLMSAGIPLPKRVFAHGFLFNRGEKM 313 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNVIDP ++E G+D LRYFL+RE+ G+DG Y D + R NADLAN +GNL Sbjct: 314 SKSLGNVIDPFGLVERYGLDQLRYFLMREVPFGQDGSYSHDAIVNRTNADLANDLGNLAQ 373 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PG F+E+D++IL L R+ M +Q +H AL + ++V+E Sbjct: 374 RSLSMIAKNCEGKVPVPGEFSEADKAILDQAEAALDTARKAMDDQALHLALGGIFAVVAE 433 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EVIR++ I++Q F+P+ A K+ DIL + + Sbjct: 434 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVIRRVGIMVQPFIPQSAEKLLDILAIPADK 493 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 494 RQFSDVTASQLVGGTDLPAPQPVFPRYV 521 >gi|225852500|ref|YP_002732733.1| methionyl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|256113542|ref|ZP_05454368.1| methionyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|256264009|ref|ZP_05466541.1| methionyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|265994915|ref|ZP_06107472.1| methionyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|225640865|gb|ACO00779.1| methionyl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|262766028|gb|EEZ11817.1| methionyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|263094153|gb|EEZ18075.1| methionyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|326409016|gb|ADZ66081.1| methionyl-tRNA synthetase [Brucella melitensis M28] gi|326538726|gb|ADZ86941.1| methionyl-tRNA synthetase [Brucella melitensis M5-90] Length = 515 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 279/508 (54%), Positives = 377/508 (74%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G+DV F TGTDEHG K+ ++A+ Sbjct: 3 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MA+VL+ S DD+IRT+E+RH+ +++W+ + GDIYKG Sbjct: 63 KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQVIWQAMVANGDIYKGG 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EEE YFFRLSAYQDKLL YE++ Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+ Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP E++E G+D LRYFL+RE+ G+DG Y + + R NADLAN +GNL Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PGAF+E+D++IL L+ R+ M +Q +H AL + ++V+E Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EV+R++ I++Q F+P+ A K+ DIL V + Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509 >gi|254719073|ref|ZP_05180884.1| methionyl-tRNA synthetase [Brucella sp. 83/13] gi|265984063|ref|ZP_06096798.1| methionyl-tRNA synthetase [Brucella sp. 83/13] gi|306838355|ref|ZP_07471200.1| methionyl-tRNA synthetase [Brucella sp. NF 2653] gi|264662655|gb|EEZ32916.1| methionyl-tRNA synthetase [Brucella sp. 83/13] gi|306406495|gb|EFM62729.1| methionyl-tRNA synthetase [Brucella sp. NF 2653] Length = 515 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 280/508 (55%), Positives = 376/508 (74%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G+DV F TGTDEHG K+ ++A+ Sbjct: 3 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MA+VL+ S DD+IRT+E+RH+ + +W+ + GDIYKG Sbjct: 63 KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EEE YFFRLSAYQDKLL YE++ Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+ Sbjct: 243 YPDTTD-KRWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP E++E G+D LRYFL+RE+ G+DG Y + + R NADLAN +GNL Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PGAF+E+D++IL L+ R+ M +Q +H AL V ++V+E Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALEAARKAMDDQALHLALGAVFAVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EV+R++ I++Q F+P+ A K+ DIL V + Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPTDK 481 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509 >gi|17987270|ref|NP_539904.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|17982947|gb|AAL52168.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] Length = 544 Score = 619 bits (1596), Expect = e-175, Method: Compositional matrix adjust. Identities = 278/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G+DV F TGTDEHG K+ ++A+ Sbjct: 32 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MA+VL+ S DD+IRT+E+RH+ +++W+ + GDIYKG Sbjct: 92 KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQVIWQAMVANGDIYKGG 151 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EEE YFFRLSAYQDKLL YE++ Sbjct: 152 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 211 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 212 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 271 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+ Sbjct: 272 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 330 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP E++E G+D LRYFL+RE+ G+DG Y + + R NADLAN +GNL Sbjct: 331 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 390 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PGAF+E+D++IL L+ R+ M +Q +H AL + ++V+E Sbjct: 391 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 450 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EV+R++ I++Q F+P+ A K+ DIL + Sbjct: 451 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAAPADK 510 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 511 RQFADVLASPLAGGTDLPAPQPVFPRYV 538 >gi|306840483|ref|ZP_07473242.1| methionyl-tRNA synthetase [Brucella sp. BO2] gi|306289498|gb|EFM60716.1| methionyl-tRNA synthetase [Brucella sp. BO2] Length = 515 Score = 619 bits (1595), Expect = e-175, Method: Compositional matrix adjust. Identities = 279/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G+DV F TGTDEHG K+ ++A+ Sbjct: 3 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MA+VL+ S DD+IRT+E+RH+ + +W+ + GDIYKG Sbjct: 63 KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EEE YFFRLSAYQDKLL YE++ Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+ Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP E++E G+D LRYFL+RE+ G+DG Y + + R NADLAN +GNL Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PGAF+E+D++IL L+ R+ M +Q +H AL + ++V+E Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILGQADAALEAARKAMDDQALHLALGAIFAVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EV+R++ I++Q F+P+ A K+ DIL V + Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509 >gi|153009409|ref|YP_001370624.1| methionyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] gi|151561297|gb|ABS14795.1| methionyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] Length = 515 Score = 618 bits (1594), Expect = e-175, Method: Compositional matrix adjust. Identities = 280/508 (55%), Positives = 372/508 (73%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G DV F TGTDEHG K+ ++A+ Sbjct: 3 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGKDVFFLTGTDEHGIKMLQSAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MADVL+ S DD+IRT+E+RH+ + +WK ++ GDIYKG Sbjct: 63 KEGITPRELADRNTAAFRQMADVLNSSNDDYIRTSEERHYKASQAIWKAMAGNGDIYKGG 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E DG Y Q PV+W+EEE YFFRLSAYQDKLL YE + Sbjct: 123 YAGWYSVRDEAYYGEEETEVREDGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEKN 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D K +WPAD H+IGKDI RFHA+YWPAFL+SA +PLPK+VF+HGF+ ++GEK+ Sbjct: 243 YPDTSD-EKWGYWPADAHIIGKDISRFHAVYWPAFLMSAGIPLPKRVFAHGFLFNRGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNVIDP ++E G+D LRYFL+RE+ G+DG Y D + R NADLAN +GNL Sbjct: 302 SKSLGNVIDPFGLVERYGLDQLRYFLMREVPFGQDGSYSHDAIVNRTNADLANDLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PG F+++D++IL L+ R+ M +Q +H AL + ++V+E Sbjct: 362 RSLSMIAKNCEGKVPVPGEFSDADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EVIR++ I++Q F+P+ A K+ DIL + + Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVIRRVGIMVQPFIPQSAEKLLDILAIPADK 481 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 482 RQFSDVTASQLVGGADLPAPQPVFPRYV 509 >gi|148560370|ref|YP_001258936.1| methionyl-tRNA synthetase [Brucella ovis ATCC 25840] gi|148371627|gb|ABQ61606.1| methionyl-tRNA synthetase [Brucella ovis ATCC 25840] Length = 515 Score = 618 bits (1594), Expect = e-175, Method: Compositional matrix adjust. Identities = 279/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G+DV F TGTDEHG K+ ++A+ Sbjct: 3 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MA+VL+ S DD+IRT+E+RH+ + +W+ + GDIYKG Sbjct: 63 KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EEE YFFRLSAYQDKLL YE++ Sbjct: 123 YTGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+ Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP E++E G+D LRYFL+RE+ G+DG Y + + R NADLAN +GNL Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PGAF+E+D++IL L+ R+ M +Q +H AL + ++V+E Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EV+R++ I++Q F+P+ A K+ DIL V + Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509 >gi|23501876|ref|NP_698003.1| methionyl-tRNA synthetase [Brucella suis 1330] gi|225627473|ref|ZP_03785510.1| methionyl-tRNA synthetase [Brucella ceti str. Cudo] gi|254701747|ref|ZP_05163575.1| methionyl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|254706809|ref|ZP_05168637.1| methionyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|254710081|ref|ZP_05171892.1| methionyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|254714082|ref|ZP_05175893.1| methionyl-tRNA synthetase [Brucella ceti M644/93/1] gi|254716862|ref|ZP_05178673.1| methionyl-tRNA synthetase [Brucella ceti M13/05/1] gi|256031577|ref|ZP_05445191.1| methionyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|260168708|ref|ZP_05755519.1| methionyl-tRNA synthetase [Brucella sp. F5/99] gi|261218663|ref|ZP_05932944.1| methionyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261314276|ref|ZP_05953473.1| methionyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261317630|ref|ZP_05956827.1| methionyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261321839|ref|ZP_05961036.1| methionyl-tRNA synthetase [Brucella ceti M644/93/1] gi|261752300|ref|ZP_05996009.1| methionyl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|261758184|ref|ZP_06001893.1| methionyl-tRNA synthetase [Brucella sp. F5/99] gi|265988665|ref|ZP_06101222.1| methionyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|25009345|sp|P59078|SYM_BRUSU RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|23347815|gb|AAN29918.1| methionyl-tRNA synthetase [Brucella suis 1330] gi|225617478|gb|EEH14523.1| methionyl-tRNA synthetase [Brucella ceti str. Cudo] gi|260923752|gb|EEX90320.1| methionyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261294529|gb|EEX98025.1| methionyl-tRNA synthetase [Brucella ceti M644/93/1] gi|261296853|gb|EEY00350.1| methionyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261303302|gb|EEY06799.1| methionyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261738168|gb|EEY26164.1| methionyl-tRNA synthetase [Brucella sp. F5/99] gi|261742053|gb|EEY29979.1| methionyl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|264660862|gb|EEZ31123.1| methionyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] Length = 515 Score = 618 bits (1594), Expect = e-175, Method: Compositional matrix adjust. Identities = 279/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G+DV F TGTDEHG K+ ++A+ Sbjct: 3 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MA+VL+ S DD+IRT+E+RH+ + +W+ + GDIYKG Sbjct: 63 KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EEE YFFRLSAYQDKLL YE++ Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+ Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP E++E G+D LRYFL+RE+ G+DG Y + + R NADLAN +GNL Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PGAF+E+D++IL L+ R+ M +Q +H AL + ++V+E Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EV+R++ I++Q F+P+ A K+ DIL V + Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509 >gi|256044655|ref|ZP_05447559.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|260564001|ref|ZP_05834487.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|265991079|ref|ZP_06103636.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|25009373|sp|Q8YH17|SYM_BRUME RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|260154017|gb|EEW89109.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|263001863|gb|EEZ14438.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] Length = 515 Score = 618 bits (1594), Expect = e-175, Method: Compositional matrix adjust. Identities = 278/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G+DV F TGTDEHG K+ ++A+ Sbjct: 3 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MA+VL+ S DD+IRT+E+RH+ +++W+ + GDIYKG Sbjct: 63 KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQVIWQAMVANGDIYKGG 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EEE YFFRLSAYQDKLL YE++ Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+ Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP E++E G+D LRYFL+RE+ G+DG Y + + R NADLAN +GNL Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PGAF+E+D++IL L+ R+ M +Q +H AL + ++V+E Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EV+R++ I++Q F+P+ A K+ DIL + Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAAPADK 481 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509 >gi|256369417|ref|YP_003106925.1| methionine--tRNA ligase [Brucella microti CCM 4915] gi|255999577|gb|ACU47976.1| methionine--tRNA ligase [Brucella microti CCM 4915] Length = 515 Score = 618 bits (1594), Expect = e-175, Method: Compositional matrix adjust. Identities = 279/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G+DV F TGTDEHG K+ ++A+ Sbjct: 3 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MA+VL+ S DD+IRT+E+RH+ + +W+ + GDIYKG Sbjct: 63 KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EEE YFFRLSAYQDKLL YE++ Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+ Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP E++E G+D LRYFL+RE+ G+DG Y + + R NADLAN +GNL Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PGAF+E+D++IL L+ R+ M +Q +H AL + ++V+E Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGTIFAVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EV+R++ I++Q F+P+ A K+ DIL V + Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509 >gi|237815420|ref|ZP_04594418.1| methionyl-tRNA synthetase [Brucella abortus str. 2308 A] gi|237790257|gb|EEP64467.1| methionyl-tRNA synthetase [Brucella abortus str. 2308 A] Length = 530 Score = 618 bits (1593), Expect = e-175, Method: Compositional matrix adjust. Identities = 279/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G+DV F TGTDEHG K+ ++A+ Sbjct: 18 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 77 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MA+VL+ S DD+IRT+E+RH+ + +W+ + GDIYKG Sbjct: 78 KEGITPRDLADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 137 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EEE YFFRLSAYQDKLL YE++ Sbjct: 138 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 197 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 198 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 257 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+ Sbjct: 258 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 316 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP E++E G+D LRYFL+RE+ G+DG Y + + R NADLAN +GNL Sbjct: 317 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 376 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PGAF+E+D++IL L+ R+ M +Q +H AL + ++V+E Sbjct: 377 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 436 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EV+R++ I++Q F+P+ A K+ DIL V + Sbjct: 437 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 496 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 497 RQFADVLASPLAGGTDLPAPQPVFPRYV 524 >gi|256061087|ref|ZP_05451242.1| methionyl-tRNA synthetase [Brucella neotomae 5K33] gi|261325089|ref|ZP_05964286.1| methionyl-tRNA synthetase [Brucella neotomae 5K33] gi|261301069|gb|EEY04566.1| methionyl-tRNA synthetase [Brucella neotomae 5K33] Length = 515 Score = 618 bits (1593), Expect = e-175, Method: Compositional matrix adjust. Identities = 279/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G+DV F TGTDEHG K+ ++A+ Sbjct: 3 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MA+VL+ S DD+IRT+E+RH+ + +W+ + GDIYKG Sbjct: 63 KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EEE YFFRLSAYQDKLL YE++ Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPRDEKHVMYVWVDALTNYITALG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+ Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP E++E G+D LRYFL+RE+ G+DG Y + + R NADLAN +GNL Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PGAF+E+D++IL L+ R+ M +Q +H AL + ++V+E Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EV+R++ I++Q F+P+ A K+ DIL V + Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509 >gi|254704289|ref|ZP_05166117.1| methionyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|261754957|ref|ZP_05998666.1| methionyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|261744710|gb|EEY32636.1| methionyl-tRNA synthetase [Brucella suis bv. 3 str. 686] Length = 515 Score = 617 bits (1592), Expect = e-175, Method: Compositional matrix adjust. Identities = 279/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G+DV F TGTDEHG K+ ++A+ Sbjct: 3 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MA+VL+ S DD+IRT+E+RH+ + +W+ + GDIYKG Sbjct: 63 KEGITPRELADRNTSAFRRMAEVLNNSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EEE YFFRLSAYQDKLL YE++ Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+ Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP E++E G+D LRYFL+RE+ G+DG Y + + R NADLAN +GNL Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PGAF+E+D++IL L+ R+ M +Q +H AL + ++V+E Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EV+R++ I++Q F+P+ A K+ DIL V + Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509 >gi|62289919|ref|YP_221712.1| methionyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941] gi|82699846|ref|YP_414420.1| methionyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308] gi|189024161|ref|YP_001934929.1| methionine--tRNA ligase [Brucella abortus S19] gi|254697361|ref|ZP_05159189.1| methionyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|254730259|ref|ZP_05188837.1| methionyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|260545332|ref|ZP_05821073.1| methionine-tRNA ligase [Brucella abortus NCTC 8038] gi|260757954|ref|ZP_05870302.1| methionyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|260761777|ref|ZP_05874120.1| methionyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|62196051|gb|AAX74351.1| MetG, methionyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941] gi|82615947|emb|CAJ10970.1| Aminoacyl-tRNA synthetase, class I:Aminoacyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, class Ia [Brucella melitensis biovar Abortus 2308] gi|189019733|gb|ACD72455.1| methionine--tRNA ligase [Brucella abortus S19] gi|260096739|gb|EEW80614.1| methionine-tRNA ligase [Brucella abortus NCTC 8038] gi|260668272|gb|EEX55212.1| methionyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|260672209|gb|EEX59030.1| methionyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] Length = 515 Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust. Identities = 279/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G+DV F TGTDEHG K+ ++A+ Sbjct: 3 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MA+VL+ S DD+IRT+E+RH+ + +W+ + GDIYKG Sbjct: 63 KEGITPRDLADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EEE YFFRLSAYQDKLL YE++ Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+ Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP E++E G+D LRYFL+RE+ G+DG Y + + R NADLAN +GNL Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PGAF+E+D++IL L+ R+ M +Q +H AL + ++V+E Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EV+R++ I++Q F+P+ A K+ DIL V + Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509 >gi|306843870|ref|ZP_07476465.1| methionyl-tRNA synthetase [Brucella sp. BO1] gi|306275625|gb|EFM57349.1| methionyl-tRNA synthetase [Brucella sp. BO1] Length = 515 Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust. Identities = 278/508 (54%), Positives = 375/508 (73%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G+DV F TGTDEHG K+ ++A+ Sbjct: 3 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MA+VL+ S DD+IRT+E+RH+ + +W+ + GDIYKG Sbjct: 63 KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E DG Y Q PV+W+EEE YFFRLSAYQDKLL YE++ Sbjct: 123 YAGWYSVRDEAYYGEEETEVREDGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+ Sbjct: 243 YPDTTD-KRWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP E++E G+D LRYFL+RE+ G+DG Y + + R NADLAN +GNL Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PGAF+E+D++IL L+ R+ M +Q +H AL + ++V+E Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALEAARKAMDDQALHLALGAIFAVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EV+R++ I++Q F+P+ A K+ DIL V + Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 482 RQFADVQASPLAGGTDLPAPQPVFPRYV 509 >gi|256159715|ref|ZP_05457462.1| methionyl-tRNA synthetase [Brucella ceti M490/95/1] gi|256254977|ref|ZP_05460513.1| methionyl-tRNA synthetase [Brucella ceti B1/94] gi|261222163|ref|ZP_05936444.1| methionyl-tRNA synthetase [Brucella ceti B1/94] gi|265998128|ref|ZP_06110685.1| methionyl-tRNA synthetase [Brucella ceti M490/95/1] gi|260920747|gb|EEX87400.1| methionyl-tRNA synthetase [Brucella ceti B1/94] gi|262552596|gb|EEZ08586.1| methionyl-tRNA synthetase [Brucella ceti M490/95/1] Length = 515 Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust. Identities = 278/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G+DV F TGTDEHG K+ ++A+ Sbjct: 3 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MA+VL+ S DD+IRT+E+RH+ + +W+ + GDIYKG Sbjct: 63 KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GW+S+RDEAYY ++E ADG Y Q PV+W+EEE YFFRLSAYQDKLL YE++ Sbjct: 123 YAGWHSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+ Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP E++E G+D LRYFL+RE+ G+DG Y + + R NADLAN +GNL Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PGAF+E+D++IL L+ R+ M +Q +H AL + ++V+E Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EV+R++ I++Q F+P+ A K+ DIL V + Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509 >gi|254693711|ref|ZP_05155539.1| methionyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|261213983|ref|ZP_05928264.1| methionyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|260915590|gb|EEX82451.1| methionyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] Length = 515 Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust. Identities = 278/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G+DV F TGTDEHG K+ ++A+ Sbjct: 3 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MA+VL+ S DD+IRT+E+RH+ + +W+ + GDIYKG Sbjct: 63 KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EEE YFFRLSAYQDKLL YE++ Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+ Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP E++E G+D LRYFL+RE+ G+DG Y + + R NADLAN +GNL Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PGAF+E+D++IL L+ R+ + +Q +H AL + ++V+E Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAIDDQALHLALGAIFAVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EV+R++ I++Q F+P+ A K+ DIL V + Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509 >gi|163843264|ref|YP_001627668.1| methionyl-tRNA synthetase [Brucella suis ATCC 23445] gi|163673987|gb|ABY38098.1| methionyl-tRNA synthetase [Brucella suis ATCC 23445] Length = 515 Score = 615 bits (1587), Expect = e-174, Method: Compositional matrix adjust. Identities = 278/508 (54%), Positives = 375/508 (73%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G+DV F TGTDEHG K+ ++A+ Sbjct: 3 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MA+VL+ S DD+IRT+E+RH+ + +W+ + GDIYKG Sbjct: 63 KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EEE YFFRLSAYQDKLL YE++ Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+ Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP E++E G+D LRYFL+RE+ G+DG Y + + R NADLAN +GNL Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P P AF+E+D++IL L+ R+ M +Q +H AL + ++V+E Sbjct: 362 RSLSMIAKNCEGKVPQPSAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EV+R++ I++Q F+P+ A K+ DIL V + Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509 >gi|161618949|ref|YP_001592836.1| methionyl-tRNA synthetase [Brucella canis ATCC 23365] gi|260566464|ref|ZP_05836934.1| methionyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|161335760|gb|ABX62065.1| methionyl-tRNA synthetase [Brucella canis ATCC 23365] gi|260155982|gb|EEW91062.1| methionyl-tRNA synthetase [Brucella suis bv. 4 str. 40] Length = 515 Score = 615 bits (1585), Expect = e-174, Method: Compositional matrix adjust. Identities = 278/508 (54%), Positives = 375/508 (73%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G+DV F TGTDEHG K+ ++A+ Sbjct: 3 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MA+VL+ S DD+IRT+E+RH+ + +W+ + GDIYKG Sbjct: 63 KEGITPRELADRNTSAFRRMAEVLNNSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EEE YFFRLSAYQDKLL YE++ Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVK GLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 183 PGFIMPAERRNEIVSFVKLGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+ Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP E++E G+D LRYFL+RE+ G+DG Y + + R NADLAN +GNL Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PGAF+E+D++IL L+ R+ M +Q +H AL + ++V+E Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EV+R++ I++Q F+P+ A K+ DIL V + Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509 >gi|114704621|ref|ZP_01437529.1| methionyl-tRNA synthetase [Fulvimarina pelagi HTCC2506] gi|114539406|gb|EAU42526.1| methionyl-tRNA synthetase [Fulvimarina pelagi HTCC2506] Length = 518 Score = 615 bits (1585), Expect = e-174, Method: Compositional matrix adjust. Identities = 285/509 (55%), Positives = 372/509 (73%), Gaps = 3/509 (0%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E+ Y++TAI+YPN +PHIGHAYE+I D LARF RLDG DV F TGTDEHG K+ + A+ Sbjct: 3 ERYYLTTAISYPNGKPHIGHAYELIATDALARFKRLDGYDVFFLTGTDEHGIKMLQNARA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + D NS F+ M+ L S DDFIRT+E RH C+ +WK++ + GDIYK Y Sbjct: 63 QGLTPRELADANSAEFQRMSAALGGSNDDFIRTSEARHKIACQAIWKRMEEAGDIYKDAY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SGWYS+RDEAYY +DE + DG Q PV W+EEE YFFRLS +QD LL Y +P Sbjct: 123 SGWYSVRDEAYYGEDETHISEDGTRIGPQGTPVDWIEEESYFFRLSNFQDPLLKLYAENP 182 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P ERRNEVISFVKSGL+DLS+SR TFDWGI +P D +++MYVW+DALTNYLT TGY Sbjct: 183 DFIGPNERRNEVISFVKSGLRDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYLTATGY 242 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 ++ +G + +FWPADLHVIGKDI RFH +YWPAFL+SA LPL K+V++HGF+ ++GEK+S Sbjct: 243 PEDGNGGRTEFWPADLHVIGKDITRFHTVYWPAFLMSAGLPLCKRVYAHGFLFNRGEKMS 302 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS+GNVIDP +++ G+D LRYFL+RE+ G+DG Y DG+ R N++LAN +GNL R Sbjct: 303 KSVGNVIDPFALVDTYGLDRLRYFLLREVPFGQDGNYSHDGIVNRTNSELANDLGNLAQR 362 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 S+SM+ K +G +P PGAFTE+DE IL +L + RE ++ Q +H+ LA +I +VS+ Sbjct: 363 SLSMVAKHCEGRVPDPGAFTEADELILKAAGDLLAQCREAVEKQQLHQVLAAIIGVVSQA 422 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 +RYF ++PW L+KT+ DR TVLYVT EV+R +AILLQ F P+ A K+ DIL V +++R Sbjct: 423 NRYFAGEEPWALRKTDFDRMQTVLYVTAEVLRTVAILLQPFTPESAGKLLDILGVQEDDR 482 Query: 485 CFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 F L + RL PG L PIFPRF+ Sbjct: 483 GFDELTKGTRLAPGASLPAP-KPIFPRFV 510 >gi|294852413|ref|ZP_06793086.1| methionyl-tRNA synthetase [Brucella sp. NVSL 07-0026] gi|294821002|gb|EFG38001.1| methionyl-tRNA synthetase [Brucella sp. NVSL 07-0026] Length = 544 Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust. Identities = 278/508 (54%), Positives = 375/508 (73%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G+DV F TGTDEHG K+ ++A+ Sbjct: 32 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MA+VL+ S DD+IRT+E+RH+ + +W+ + GDIYKG Sbjct: 92 KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 151 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EEE YFFRLSAYQDKLL YE++ Sbjct: 152 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 211 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 212 LGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 271 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+ Sbjct: 272 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 330 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP E++E G+D LRYFL+RE+ G+DG Y + + R NADLAN +GNL Sbjct: 331 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 390 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PGAF+E+D++IL L+ R+ M +Q +H AL + ++V+E Sbjct: 391 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 450 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EV+R++ I++Q F+P+ A K+ DIL V + Sbjct: 451 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 510 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+FPR++ Sbjct: 511 RQFADVLASPLAGGTDLPAPQPVFPRYV 538 >gi|209885248|ref|YP_002289105.1| methionyl-tRNA synthetase [Oligotropha carboxidovorans OM5] gi|209873444|gb|ACI93240.1| methionyl-tRNA synthetase [Oligotropha carboxidovorans OM5] Length = 523 Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust. Identities = 280/508 (55%), Positives = 372/508 (73%), Gaps = 2/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R + YI+TAIAYPN PHIGHAYE I D LARF RLDG+DV F TGTDEHG K+ + AQ Sbjct: 9 RSRYYITTAIAYPNGAPHIGHAYEAIATDALARFQRLDGMDVFFLTGTDEHGLKMIQTAQ 68 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T +N+ F+DM L+IS+D FIRT+E HHD+ + +W++++ GDIY Sbjct: 69 KEGMTPAELATRNAARFKDMDRRLNISFDRFIRTSEVAHHDSTQEIWRRMAANGDIYLSS 128 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY +DE G D Q PV+W+EE+ YFF+LSAYQDKLL+ YE H Sbjct: 129 YAGWYSVRDEAYYAEDETVVGDDKVRRGPQGTPVEWVEEKSYFFKLSAYQDKLLALYEQH 188 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 PEFI P RRNEV+SFVK GLKDLS+SR TFDWG+K+PDDP+++MYVW+DALTNY+T Sbjct: 189 PEFIGPDVRRNEVVSFVKGGLKDLSISRTTFDWGVKVPDDPEHVMYVWVDALTNYITGIN 248 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 + D D + K+WPAD+HVIGKDI+RFHA+YWPAFL+SA + +PK+V++HGF+ ++GEK+ Sbjct: 249 FPDEAD-ANWKYWPADVHVIGKDIIRFHAVYWPAFLMSAGIAVPKRVYAHGFLFNRGEKM 307 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNV+DP E+ + GVD LRYFL+RE+ G+DG Y+ + + R NADLAN +GNL Sbjct: 308 SKSVGNVVDPFELANQYGVDQLRYFLLREVPFGQDGNYNHEAIVARTNADLANDLGNLAQ 367 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K + G++P PGAF+++D++IL+ +L + RE M Q IH AL ++ ++V+E Sbjct: 368 RSLSMIGKQHGGIVPEPGAFSDADKAILAQADAMLAQTREAMATQQIHVALNEIWTVVAE 427 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF + PW L KT+P R TVLYVT EV+RQ+AIL Q +P K+ D L +A E Sbjct: 428 ANRYFAGEAPWSLAKTDPARQKTVLYVTAEVVRQIAILAQPAMPGAMTKMLDSLAIAPEA 487 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F SL R+KPG L P+FPR++ Sbjct: 488 RYFASLATRIKPGTQLPPP-APVFPRYV 514 >gi|300023246|ref|YP_003755857.1| methionyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888] gi|299525067|gb|ADJ23536.1| methionyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888] Length = 520 Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust. Identities = 284/510 (55%), Positives = 369/510 (72%), Gaps = 3/510 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAI+YPN PHIGHAYE I DV+ARF RLDG DV F TGTDEHG K+ + A+ Sbjct: 2 REKFYITTAISYPNGVPHIGHAYEAIATDVIARFERLDGKDVFFLTGTDEHGLKMKQTAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT + D+NS F +M L +S DDFIRTTE+RH+D C LW+++ GDI+K Sbjct: 62 REGVTPRELADRNSARFIEMVKTLGLSNDDFIRTTEQRHYDACAELWRRMEKAGDIFKRP 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWYS+RDE YY + E ++ A PV+W EEE YFFRLSAYQDKLL++YE++ Sbjct: 122 YGGWYSVRDETYYKESETEVREGQRFATATGTPVEWNEEETYFFRLSAYQDKLLAHYEAN 181 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FILP ERRNEV+SFVK GL+DLS+SR T DWGI +PD P ++MYVWIDAL NY+T TG Sbjct: 182 PDFILPAERRNEVVSFVKMGLEDLSISRTTLDWGIPVPDAPGHVMYVWIDALNNYVTATG 241 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 L +P GS+A +WPA++HVIGKDI+RFHA+YWPAFL+SA LPLPK+VFSHGF+L+KGEK+ Sbjct: 242 LLTDPQGSRAHYWPANVHVIGKDIVRFHAVYWPAFLMSAGLPLPKRVFSHGFVLNKGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNV+DP ++++ G DALRYF +RE+ G+DG Y + + R+NADLAN +GNL Sbjct: 302 SKSVGNVVDPFDLVKAYGRDALRYFFLREVMFGQDGNYSAEAIANRINADLANNLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ DG IP PGAF+ D +IL+ + + R M Q I + L V ++V+E Sbjct: 362 RSLSMIFKNCDGAIPQPGAFSAEDTAILNATDALYEAARGEMDRQAITKYLDAVWAVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF A++PW KK +P R +T+LYVT E +RQ AIL Q +P+ A K+ D+L V E Sbjct: 422 ANRYFAAEEPWAKKKADPARMATILYVTAECVRQFAILAQPVMPESAAKLLDLLAVPAEA 481 Query: 484 RCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 R F SL RLK G + + +FPR++ Sbjct: 482 RTFASLGSAGRLKAGTAIPEP-QGVFPRYV 510 >gi|254689226|ref|ZP_05152480.1| methionyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|256257476|ref|ZP_05463012.1| methionyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|260754731|ref|ZP_05867079.1| methionyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|260883752|ref|ZP_05895366.1| methionyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|297248320|ref|ZP_06932038.1| methionyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] gi|260674839|gb|EEX61660.1| methionyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|260873280|gb|EEX80349.1| methionyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|297175489|gb|EFH34836.1| methionyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] Length = 515 Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust. Identities = 277/508 (54%), Positives = 374/508 (73%), Gaps = 1/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK YI+TAIAYPN +PHIGHAYE+I D +ARF RL+G+DV F TGTDEHG K+ ++A+ Sbjct: 3 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+N+ FR MA+VL+ S DD+IRT+E+RH+ + +W+ + GDIYKG Sbjct: 63 KEGITPRDLADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E ADG Y PV+W+EEE YFFRLSAYQDKLL YE++ Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPPGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T G Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+ Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP E++E G+D LRYFL+RE+ G+DG Y + + R NADLAN +GNL Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ +G +P PGAF+E+D++IL L+ R+ M +Q +H AL + ++V+E Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT EV+R++ I++Q F+P+ A K+ DIL V + Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + G P+ PR++ Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVLPRYV 509 >gi|218674615|ref|ZP_03524284.1| methionyl-tRNA synthetase [Rhizobium etli GR56] Length = 483 Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust. Identities = 276/480 (57%), Positives = 371/480 (77%), Gaps = 3/480 (0%) Query: 34 LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93 +AR+ RLDG DV F TGTDEHGQK+ + A+ G+T + D+NS F+ MA +L+ S DD Sbjct: 1 MARYQRLDGRDVFFLTGTDEHGQKMQQTARAEGITAQELADRNSGEFQAMAKLLNASNDD 60 Query: 94 FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ 153 FIRTT++RHH+T R +WK ++D GDIYK Y+GWYS+RDEAYY ++E ADG Y Q Sbjct: 61 FIRTTQERHHETSRNIWKLMADNGDIYKDSYAGWYSVRDEAYYQENETELRADGVRYGPQ 120 Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 PV+W+EE YFF+LS YQ+KLL++YE++P+FI P ERRNEVISFVKSGLKDLS+SR T Sbjct: 121 GTPVEWVEEASYFFKLSEYQEKLLAHYEANPDFIGPAERRNEVISFVKSGLKDLSVSRTT 180 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273 FDWGIK+P+DP ++MYVW+DALTNY+T TGY+++ DG +AK+WPAD+H+IGKDI+RFHA+ Sbjct: 181 FDWGIKVPNDPSHVMYVWVDALTNYITATGYIEDRDGPRAKYWPADVHIIGKDIIRFHAV 240 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 YWPAFL+SA LPLPK+VF+HGF+L+KGEK+SKSLGNV+DP+ ++ G+D +RYF +RE+ Sbjct: 241 YWPAFLMSAKLPLPKRVFAHGFLLNKGEKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREV 300 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 + G+DG Y ++ + R+N+DLANGIGNL SRS+SMI+K+ DG IP GA T+ D+++L+ Sbjct: 301 SFGQDGSYSEEAIGTRINSDLANGIGNLASRSLSMIVKNCDGKIPECGALTDEDKAMLAQ 360 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 + RE+M Q IHRALA +I++VSE DRYF Q PW LKKT+P R TVLYVT E Sbjct: 361 ADALHTSTREDMGKQQIHRALASIIAVVSETDRYFAGQAPWALKKTDPARMGTVLYVTAE 420 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 V+RQ+AILLQ F+P+ + K+ D++ + R F +L + RL G L P+FPR++ Sbjct: 421 VVRQIAILLQPFMPESSGKLLDLVAAPADKRDFAALGEAGRLIAGTPLEAP-TPVFPRYV 479 >gi|328543900|ref|YP_004304009.1| Methionyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1] gi|326413644|gb|ADZ70707.1| Methionyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1] Length = 518 Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust. Identities = 285/513 (55%), Positives = 366/513 (71%), Gaps = 4/513 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M R K YI+TAI+YPN PHIGHAYE I D +ARF RLDG DV F TGTDEHGQK+ + Sbjct: 1 MTARPKYYITTAISYPNGAPHIGHAYEAIATDAMARFQRLDGKDVYFLTGTDEHGQKMLQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G++ + D+NS FRDM L + DDFIRT+E RHH + + +W++++ GDIY Sbjct: 61 TAKKEGISVRELADRNSARFRDMVAALGCTNDDFIRTSEPRHHRSSQEIWRRMAANGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K YSGWYS+RDEAYY + E ADG Y Q +PV+W+EEE YFFRLSAYQD+LL++Y Sbjct: 121 KDSYSGWYSVRDEAYYQEGETELRADGVRYGPQGSPVEWVEEESYFFRLSAYQDRLLAHY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E++P+FI P ERRNE++SFVK GLKDLS+SR TFDWGI +P D ++MYVW+DALTNY+T Sbjct: 181 EANPDFIGPAERRNEIVSFVKRGLKDLSVSRTTFDWGIPVPGDEAHVMYVWVDALTNYIT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 G+ D D +WPAD H+IGKDI+RFHA+YWPAFL+SA +PLPK+VF+HGF+ ++G Sbjct: 241 GVGFPDE-DDPLWSYWPADAHIIGKDIIRFHAVYWPAFLMSAGIPLPKRVFAHGFLFNRG 299 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKS+GNVIDP +IE G+D RYF +RE+ G+DG Y + + R+NADLAN +GN Sbjct: 300 EKMSKSVGNVIDPFNLIEHYGLDQTRYFFLREVPFGQDGNYSHEAIVGRINADLANDLGN 359 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L RS+SMI K+ DG++P PGA T DE+IL +L R Q IH+ALA V + Sbjct: 360 LAQRSLSMIAKNCDGVLPAPGALTPEDEAILGQADVMLDTCRAAFARQEIHQALACVWAC 419 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V+E +RYF AQ+PW L+K++P R TVLYVT EVIRQ+AIL Q P A + D L VA Sbjct: 420 VAEANRYFAAQEPWALRKSDPARMGTVLYVTAEVIRQIAILAQPVTPNAAALLLDNLGVA 479 Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 +NR F L RL G + K P FPR++ Sbjct: 480 ADNRVFARLGAAGRLAAGVAIPKPV-PAFPRYV 511 >gi|192291492|ref|YP_001992097.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1] gi|192285241|gb|ACF01622.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1] Length = 514 Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust. Identities = 277/511 (54%), Positives = 369/511 (72%), Gaps = 2/511 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +R YI+TAIAYPN PHIGHAYE I D LARF RLDG DV F TGTDEHG K+ + Sbjct: 1 MAQRNSFYITTAIAYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGLKMIQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ G+T +N+ FR+M D L +SYD FIRT+E++HH + + +WK++ DKGDIY Sbjct: 61 TAQKEGLTPHALATRNAGRFREMDDRLGVSYDRFIRTSEEQHHRSVQEVWKRMQDKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 YSGWYS+RDEAYY +DE G D Q PV+W+EE+ YFF+LSAYQDKLL Y Sbjct: 121 LDSYSGWYSVRDEAYYAEDETVVGEDKVRRGPQGTPVEWVEEKSYFFKLSAYQDKLLKLY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E P+FI P RRNEVISFVKSGLKDLS+SR TFDWG+K+P DP+++MYVW+DALTNY++ Sbjct: 181 EDQPDFIGPDSRRNEVISFVKSGLKDLSVSRTTFDWGVKVPGDPEHVMYVWVDALTNYIS 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 G+ D D + +WPAD+HVIGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ +KG Sbjct: 241 GVGFPDEND-ANWHYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPVQKRVYAHGFLFNKG 299 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKS+GN++DP + ++ GVD +RYF +RE+ G DG Y+ + + R+NADLAN +GN Sbjct: 300 EKMSKSVGNIVDPFNLADQYGVDQVRYFFLREVPFGSDGSYNHEAIVNRINADLANDLGN 359 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L RS++M+ K +G +P GAF+E+D +IL++ ++ + R M Q IH+AL V ++ Sbjct: 360 LAQRSLTMVAKQCEGKVPEHGAFSENDSAILAMADGMIAQARTAMATQQIHQALNAVWAV 419 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V+E +RYF + PW L KT+P R TVLYVT EV+RQ+AIL Q +P A K+ DIL +A Sbjct: 420 VAEANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQIAILAQPAIPTAAAKLLDILGIA 479 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 + R F +L R+ PG L PIFPR++ Sbjct: 480 EGQRDFAALATRIVPGTPLPAP-APIFPRYV 509 >gi|110633935|ref|YP_674143.1| methionyl-tRNA synthetase [Mesorhizobium sp. BNC1] gi|110284919|gb|ABG62978.1| methionyl-tRNA synthetase [Chelativorans sp. BNC1] Length = 517 Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust. Identities = 276/510 (54%), Positives = 364/510 (71%), Gaps = 4/510 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE YI+TAI+YPN +PHIGHAYE+I D LARF R DG DV+F TGTDEHG K+ + A+ Sbjct: 3 RETFYITTAISYPNGRPHIGHAYELIATDALARFQRCDGKDVMFLTGTDEHGIKMLQTAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T D+N+ F+ MA +L+ S DDFIRTTE+RH + +WK ++D+GDIY G Sbjct: 63 KEGITAGELADRNAPEFQRMAKLLNASNDDFIRTTEERHRTASQAIWKAMADRGDIYLGG 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 YSGWYS+RDEAYY +DE G DG Y Q PV+W+EEE YFFRLSAYQ++LL YE + Sbjct: 123 YSGWYSVRDEAYYGEDETRVGEDGVRYGPQGTPVEWVEEESYFFRLSAYQERLLKLYEEN 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P ERRNE++SFV+SGL+DLS+SR TFDWG+ +P D +++MYVW+DALTNY+T G Sbjct: 183 PDFIGPAERRNEIVSFVRSGLRDLSISRTTFDWGVPVPGDEKHVMYVWVDALTNYITALG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D + ++WPAD+H+IGKDI+RFHAIYWPAFL+SA + LPK+VF HGF+ ++GEK+ Sbjct: 243 YPDQ-DAERWRYWPADVHIIGKDIIRFHAIYWPAFLMSAGIALPKRVFGHGFLFNRGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP +IE G+D +RYF +RE+ G+DG Y + + R NADLAN +GNL Sbjct: 302 SKSVGNVIDPFTMIEHYGLDQVRYFFLREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ DG +P G + +D +IL L R M Q IH ALA + +V+E Sbjct: 362 RSLSMIAKNCDGKVPARGELSAADRAILDQAEAALATARGAMGRQAIHAALAAIFDVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF AQ+PW L+KT+P R TVLY T E +R++AIL Q F+P A K+ D+L V + Sbjct: 422 ANRYFAAQEPWALRKTDPARMETVLYTTAETLRRIAILCQPFIPSSAEKLLDLLSVPQDR 481 Query: 484 RCFQSLDQR--LKPGFMLHKTFDPIFPRFL 511 R F + + L PG L P+FPR++ Sbjct: 482 RGFADVGETAMLAPGTPLPAP-QPVFPRYV 510 >gi|260459472|ref|ZP_05807727.1| methionyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] gi|259035026|gb|EEW36282.1| methionyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] Length = 517 Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust. Identities = 280/510 (54%), Positives = 367/510 (71%), Gaps = 4/510 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+ YI+TAI+YPN +PHIGHAYE+I D LARF RLDG V F TGTDEHG K+ + A+ Sbjct: 3 RDTFYITTAISYPNGKPHIGHAYEVIATDALARFQRLDGKQVFFLTGTDEHGIKMLQTAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ + D+NS +F+ MA L+ S DDFIRTTE+RH+ + + +WK + GDIYKG Sbjct: 63 REGISARELADRNSADFKRMAAALNASNDDFIRTTEERHYASSQAIWKAMDANGDIYKGG 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY ++E AD Y Q PV+W+EEE YFFRLSAYQDKL++ YES Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADNVRYGPQGTPVEWVEEESYFFRLSAYQDKLIALYESQ 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P ERRNEV+SFVKSGLKDLS+SR TFDWG+ +P D +++MYVW+DALTNY+T G Sbjct: 183 PDFIGPAERRNEVMSFVKSGLKDLSISRTTFDWGVPVPGDEKHVMYVWVDALTNYITGVG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D D K +FWPAD H+IGKDI+RFHA+YWPAFL+SA +PLPK+VF HGF+ ++GEK+ Sbjct: 243 YPDEKD-EKWRFWPADAHIIGKDIVRFHAVYWPAFLMSAGIPLPKRVFGHGFLFNRGEKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP ++E G+D +RYF +RE+ G+DG Y + + R NADLANG+GNL Sbjct: 302 SKSVGNVIDPFTMVEHYGLDQVRYFFLREVPFGQDGSYSHEAIVNRTNADLANGLGNLAQ 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ G++P G TE+D +IL L R+ M Q IH ALA + +V+E Sbjct: 362 RSLSMIAKNCGGVVPKRGDLTEADSAILDQAVAALATARKAMAGQGIHLALAAIFDVVAE 421 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 DRYF Q PW LKKT+P+R TVL+ T EV+R++ +L Q FVP A K+ D+L V + Sbjct: 422 ADRYFAGQAPWALKKTDPERMETVLWTTAEVVRRVTVLCQPFVPGSAAKLLDLLAVPADK 481 Query: 484 RCFQSL--DQRLKPGFMLHKTFDPIFPRFL 511 R F+ + D L PG L + +FPR++ Sbjct: 482 RDFEHVHADHALVPGTAL-PVPEGVFPRYV 510 >gi|39935844|ref|NP_948120.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris CGA009] gi|39649698|emb|CAE28219.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris CGA009] Length = 514 Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust. Identities = 277/511 (54%), Positives = 368/511 (72%), Gaps = 2/511 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +R YI+TAIAYPN PHIGHAYE I D LARF RLDG DV F TGTDEHG K+ + Sbjct: 1 MAQRNSFYITTAIAYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGLKMIQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ G+T +N+ FR+M D L +SYD FIRT+E++HH + + +WK++ DKGDIY Sbjct: 61 TAQKEGLTPHALATRNAGRFREMDDRLGVSYDRFIRTSEEQHHRSVQEVWKRMQDKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 YSGWYS+RDEAYY +DE G D Q PV+W+EE+ YFF+LSAYQDKLL Y Sbjct: 121 LDSYSGWYSVRDEAYYAEDETVVGDDKVRRGPQGTPVEWVEEKSYFFKLSAYQDKLLKLY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E P+FI P RRNEVISFVKSGLKDLS+SR TFDWG+K+P DP+++MYVW+DALTNY++ Sbjct: 181 EDQPDFIGPDSRRNEVISFVKSGLKDLSVSRTTFDWGVKVPGDPEHVMYVWVDALTNYIS 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 G+ D D +WPAD+HVIGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ +KG Sbjct: 241 GVGFPDEND-KNWHYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPVQKRVYAHGFLFNKG 299 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKS+GN++DP + ++ GVD +RYF +RE+ G DG Y+ + + R+NADLAN +GN Sbjct: 300 EKMSKSVGNIVDPFNLADQYGVDQVRYFFLREVPFGSDGSYNHEAIVNRINADLANDLGN 359 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L RS++M+ K +G +P GAF+E+D +IL++ ++ + R M Q IH+AL V ++ Sbjct: 360 LAQRSLTMVAKQCEGKVPEHGAFSETDSAILAMADAMITQARTAMATQQIHQALNAVWAV 419 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V+E +RYF + PW L KT+P R TVLYVT EV+RQ+AIL Q +P A K+ DIL +A Sbjct: 420 VAEANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQIAILAQPAIPTAAAKLLDILGIA 479 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 + R F +L R+ PG L PIFPR++ Sbjct: 480 EGQRDFAALATRIVPGTPLPAP-APIFPRYV 509 >gi|316934061|ref|YP_004109043.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris DX-1] gi|315601775|gb|ADU44310.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris DX-1] Length = 514 Score = 602 bits (1551), Expect = e-170, Method: Compositional matrix adjust. Identities = 277/511 (54%), Positives = 365/511 (71%), Gaps = 2/511 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +R YI+TAI+YPN PHIGHAYE I D LARF RLDG DV F TGTDEHG K+ + Sbjct: 1 MAQRNSFYITTAISYPNGAPHIGHAYEAIATDALARFQRLDGRDVFFLTGTDEHGLKMIQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ G+T +N+ FRDM D ISYD FIRT+E++HH + + +WK++ GDIY Sbjct: 61 TAQREGMTPAELAARNAGRFRDMDDRFGISYDRFIRTSEEQHHASVQEVWKRMQASGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 YSGWYS+RDEAYY +DE G DG Q PV+W+EE+ YFF+LSAYQD+LL Y Sbjct: 121 LDSYSGWYSVRDEAYYAEDETVVGEDGVRRGPQGTPVEWVEEKSYFFKLSAYQDRLLKLY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E P+FI P RRNEVISFVK GLKDLS+SR TFDWG+K+P DP+++MYVW+DALTNY+T Sbjct: 181 EEQPDFIGPDARRNEVISFVKGGLKDLSVSRTTFDWGVKVPSDPEHVMYVWVDALTNYIT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 G+ D D +WPAD+HVIGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ +KG Sbjct: 241 GVGFPDESD-KNWHYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPIQKRVYAHGFLFNKG 299 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKS+GN++DP + ++ GVD +RYF +RE+ G DG Y+ + + R+NADLAN +GN Sbjct: 300 EKMSKSVGNIVDPFNLADQYGVDQVRYFFLREVPFGSDGSYNHEAIVNRINADLANDLGN 359 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L RS++MI K DG +P GAF+E+D +IL++ ++ + R M Q IH+AL V ++ Sbjct: 360 LAQRSLTMIAKQCDGKVPEHGAFSENDSAILAMADGMIAQARTAMATQQIHQALNAVWAV 419 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V+E +RYF + PW L KT+P R TVLYVT EV+RQ+AIL Q +P A K+ DIL +A Sbjct: 420 VAEANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQIAILAQPAIPTAAAKLLDILGIA 479 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 + R F +L R+ PG L PIFPR++ Sbjct: 480 ADARDFAALPTRIVPGTPLPAP-APIFPRYV 509 >gi|115524873|ref|YP_781784.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisA53] gi|115518820|gb|ABJ06804.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisA53] Length = 518 Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust. Identities = 275/508 (54%), Positives = 367/508 (72%), Gaps = 2/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+ Y++TAIAYPN PHIGHAYE I D LARF RLDG DV F TGTDEHGQK+ + AQ Sbjct: 8 RDTYYLTTAIAYPNGVPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGQKMVQTAQ 67 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T +N+ FR+M D L++SYD FIRTTE++HH + + +W+++ GDIY Sbjct: 68 KEGLTPHDLATRNAGRFREMDDKLNVSYDRFIRTTEEQHHRSSQEIWRRMLKNGDIYLDS 127 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY +DE G D Q +PV+W+EE+ YFF+LSAYQDKLL Y Sbjct: 128 YAGWYSVRDEAYYAEDETTVGEDKVRRGPQGSPVEWVEEKSYFFKLSAYQDKLLKLYADQ 187 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P R+NEV+SFVK GLKDLS+SR TFDWGIK+PD+ ++MYVW+DALTNY+T G Sbjct: 188 PDFIGPDSRKNEVVSFVKGGLKDLSVSRTTFDWGIKVPDEEGHVMYVWVDALTNYITGVG 247 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 + D D ++WPADLHVIGKDI+RFHA+YWPAFL+SA +P+ K+VF+HGF+ ++GEK+ Sbjct: 248 FPDETD-PNWRYWPADLHVIGKDIIRFHAVYWPAFLMSAGIPVQKRVFAHGFLFNRGEKM 306 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNV+DP + E+ GVD LRYFL+RE+ G+DG Y+ + + R+NADLAN +GNL Sbjct: 307 SKSVGNVVDPFNLAEQYGVDQLRYFLLREVQFGQDGSYNHEAIVNRINADLANDLGNLAQ 366 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K Y ++P PGAF+++D+++L+ +L+ R M Q IH+AL V ++V E Sbjct: 367 RSLSMIAKQYASIVPEPGAFSDNDKAMLAQADGMLELARTAMATQQIHQALNAVWAVVGE 426 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF + PW L KT+P R TVLYVT EVIRQ+AIL Q +P A K+ DIL + + Sbjct: 427 ANRYFAGEAPWALAKTDPPRQKTVLYVTAEVIRQVAILAQPAIPASAAKLLDILAIPADQ 486 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F +L R+ PG + P+FPR++ Sbjct: 487 RDFAALPNRITPGTQMPAP-APVFPRYV 513 >gi|299133888|ref|ZP_07027082.1| methionyl-tRNA synthetase [Afipia sp. 1NLS2] gi|298591724|gb|EFI51925.1| methionyl-tRNA synthetase [Afipia sp. 1NLS2] Length = 523 Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust. Identities = 267/508 (52%), Positives = 366/508 (72%), Gaps = 2/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R + YI+TAIAYPN PHIGHAYE I D LARF RLDG DV F TGTDEHG K+ + AQ Sbjct: 9 RSRFYITTAIAYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGLKMIQTAQ 68 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 +T +N+ F++M L+IS+D FIRT+E HH + + +W++++ GDIY Sbjct: 69 KENMTPHELATRNAGRFKEMDQRLNISFDRFIRTSEPAHHASTQEIWRRMAASGDIYLDS 128 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+RDEAYY +DE G D Q PV+W+EE+ YFF+LSAYQDKLL YES Sbjct: 129 YAGWYSVRDEAYYAEDETVVGEDKVRRGPQGTPVEWVEEKSYFFKLSAYQDKLLKLYESQ 188 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNE++SFVK GLKDLS+SR TFDWG+K+P+DP+++MYVW+DALTNY+T G Sbjct: 189 PDFIGPDSRRNEIVSFVKGGLKDLSISRTTFDWGVKVPNDPEHVMYVWVDALTNYITGIG 248 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 + D + K+WPAD+H+IGKDI+RFHA+YWPAFL++A +P+PK+V++HGF+ ++GEK+ Sbjct: 249 FPDE-KAANWKYWPADVHIIGKDIIRFHAVYWPAFLMAAGIPVPKRVYAHGFLFNRGEKM 307 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNV+DP + ++ GVD +RYF +RE+ G+DG Y+ + + R NADLAN +GNL Sbjct: 308 SKSVGNVVDPFVLADQYGVDQMRYFFLREVPFGQDGNYNHEAIVARTNADLANDLGNLAQ 367 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K + G++P PG F+++D++IL+ +L + R+ M Q IH AL + ++V+E Sbjct: 368 RSLSMIGKQHGGIVPEPGTFSDNDKAILAQADAMLAQARDAMATQQIHVALNAIWAVVAE 427 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF + PW L KT+P R TVLYVT EV+RQ+AIL Q +P+ K+ DIL V E Sbjct: 428 ANRYFAGEAPWALAKTDPARQKTVLYVTAEVVRQIAILAQPAMPEAMTKMLDILAVPAET 487 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F +L R+ PG L P+FPR++ Sbjct: 488 RDFAALANRIAPGTQLPPP-TPVFPRYV 514 >gi|90417681|ref|ZP_01225593.1| methionyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] gi|90337353|gb|EAS51004.1| methionyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] Length = 515 Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust. Identities = 272/509 (53%), Positives = 372/509 (73%), Gaps = 5/509 (0%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E+ Y++TAI+YPN +PHIGHAYE I D LARF RLDG DV F TGTDEHG K+ ++A+ Sbjct: 3 ERFYLTTAISYPNGRPHIGHAYEFIATDALARFKRLDGYDVFFLTGTDEHGIKMLQSARE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ +NS F MA +L + DDFIRT+E RH + +W K++ GD+YK Y Sbjct: 63 QGISPAELARRNSAEFEAMAALLGGTNDDFIRTSEDRHVAASQAIWTKMAAAGDVYKDAY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SGWYS+RDEAYY +DE DG+ Y Q +PV+W+ EE YFF+LS +QD+LL+ YE +P Sbjct: 123 SGWYSVRDEAYYGEDETELREDGKRYGPQGSPVEWVAEESYFFKLSEFQDRLLALYEDNP 182 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P ERRNEV+SFV+SGL+DLS+SR TFDWGI +P D +++MYVW+DALTNYLT TG+ Sbjct: 183 DFIGPAERRNEVMSFVRSGLRDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYLTATGF 242 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + +G ++ +WPADLHVIGKDI+RFH +YWPAFL+SA LP+P++V++HGF+ ++GEK+S Sbjct: 243 PE--EGERSAYWPADLHVIGKDIVRFHTVYWPAFLMSAGLPVPRRVYAHGFLFNRGEKMS 300 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS+GNVIDP +++ G+D LRYFL+RE+ G+DG Y + + R N++LAN +GNL R Sbjct: 301 KSVGNVIDPAALVDVYGLDRLRYFLLREVPFGQDGNYSHEAIVNRTNSELANDLGNLAQR 360 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 S+SM+ K +PTPGAF E+D +IL+ + +L ++R + Q +H LA +I++VSE Sbjct: 361 SLSMVGKHCGAKVPTPGAFIEADTAILTAANDLLPKVRTMIDRQELHGVLAAIIAVVSEA 420 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 +RYF Q+PW L+K++P R TVL+VT E +R++AILLQ FVP+ A K+ DIL V + R Sbjct: 421 NRYFAGQEPWALRKSDPARMETVLFVTAEFLRRVAILLQPFVPESAGKLLDILGVGPDAR 480 Query: 485 CFQSL--DQRLKPGFMLHKTFDPIFPRFL 511 F L D RL PG L PIFPRF+ Sbjct: 481 TFNELTPDVRLAPGADLPAP-QPIFPRFV 508 >gi|86749798|ref|YP_486294.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris HaA2] gi|86572826|gb|ABD07383.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris HaA2] Length = 514 Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust. Identities = 274/511 (53%), Positives = 362/511 (70%), Gaps = 2/511 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +R YI+TAI+YPN PHIGHAYE I D LARF RLDG DV F TGTDEHG K+ + Sbjct: 1 MAQRNSFYITTAISYPNGAPHIGHAYEAIATDALARFQRLDGRDVFFLTGTDEHGLKMIQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ GV T V +N+ FRDM D ISYD FIRT+E++HH + + +WK++ GDIY Sbjct: 61 TAQKEGVETHVLAARNAGRFRDMDDRFGISYDRFIRTSEEQHHRSVQEVWKRMQANGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 Y+GWYS+RDEAYY +DE G D Q PV+W+EE YFF+LSAYQDKLL Y Sbjct: 121 LDSYAGWYSVRDEAYYAEDETVVGEDQIRRGPQGTPVEWVEERSYFFKLSAYQDKLLKLY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E P+FI P RRNEVISFVK GLKDLS+SR TFDWG+K+P DP+++MYVW+DALTNY+T Sbjct: 181 EDQPDFIGPDSRRNEVISFVKGGLKDLSVSRTTFDWGVKVPGDPEHVMYVWVDALTNYIT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 G+ D D + +WPAD+HVIGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ +KG Sbjct: 241 GVGFPDESD-ANWHYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPIQKRVYAHGFLFNKG 299 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKS+GN++DP + ++ GVD +RYF +RE+ G DG Y+ + + R+NADLAN +GN Sbjct: 300 EKMSKSVGNIVDPFNLADQYGVDQVRYFFLREVPFGADGSYNHEAIVNRINADLANDLGN 359 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L RS++M+ K D +P G F+E+D+++L++ ++ R M Q IH+AL V ++ Sbjct: 360 LAQRSLTMVAKQCDAQVPQHGEFSEADKAMLAMADGMIAIARPAMATQQIHQALNAVWAV 419 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V+E +RYF + PW L KT+P R TVLYVT EV+RQ+ IL Q +P A K+ DIL VA Sbjct: 420 VAEANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQVGILAQPAIPASAAKLLDILGVA 479 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 + R F +L R+ PG L PIFPR++ Sbjct: 480 EGARDFAALPTRIVPGTPLPAP-APIFPRYV 509 >gi|74420524|gb|ABA04723.1| methionyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255] Length = 692 Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust. Identities = 269/509 (52%), Positives = 363/509 (71%), Gaps = 4/509 (0%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+TAI YPN PHIGHAYE I D LARF RLDG DV F TGTDEHGQK+ + AQ Sbjct: 181 DTFYITTAIVYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGQKMVQTAQR 240 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 ++ +N+ R + + LDIS+D FIRT+E HH + + +WK+++ GDIY Y Sbjct: 241 ENISALELATRNAELLRKLDEALDISFDRFIRTSESAHHRSVQDIWKRMAGNGDIYLSNY 300 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SGWYS+RDEAYY +DE G D Q PV+W+EE+ YFF+LSAY+D+LL+ YES P Sbjct: 301 SGWYSVRDEAYYAEDETVVGEDNVRRGPQGTPVEWVEEKSYFFKLSAYEDRLLALYESEP 360 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RRNEV+SFVK GLKDLS+SR TFDWG+K+P DP+++MYVW+DALTNY+T G+ Sbjct: 361 DFIGPDSRRNEVVSFVKGGLKDLSISRTTFDWGVKVPGDPEHVMYVWVDALTNYITGVGF 420 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D D S +FWPAD+H+IGKDI+RFHA+YWPAFL+SA + LPK+V++HGF+ ++GEK+S Sbjct: 421 PDE-DESNWRFWPADIHIIGKDIIRFHAVYWPAFLMSAGIALPKRVYAHGFLFNRGEKMS 479 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS+GNV+DP + + GVD +RYF +RE+ G+DG Y+ + + R+NADLAN GNL R Sbjct: 480 KSVGNVVDPFSLAAQYGVDQMRYFFLREVPFGQDGSYNHEAIVARINADLANDFGNLAQR 539 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 S+SMI K + G++P PG F+++D++IL+ ++ RE M Q IH+AL + S+V+E Sbjct: 540 SLSMIAKQHGGVLPEPGDFSDADKAILAQADGMIAIAREAMNTQQIHQALNAIWSVVAEA 599 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 +RYF + PW L KT+P R TVLYVT EV+RQ+AIL Q +P K+ DIL + + R Sbjct: 600 NRYFAGEAPWALAKTDPARQKTVLYVTAEVVRQIAILAQPAMPAACAKLLDILGIPADER 659 Query: 485 CFQSL--DQRLKPGFMLHKTFDPIFPRFL 511 F L D R++PG L P+FPR++ Sbjct: 660 NFAMLGGDIRIRPGSALPAPV-PVFPRYV 687 >gi|91977188|ref|YP_569847.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB5] gi|91683644|gb|ABE39946.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB5] Length = 514 Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust. Identities = 270/511 (52%), Positives = 366/511 (71%), Gaps = 2/511 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +R YI+TAI+YPN PHIGHAYE I D LARF RLDG DV F TGTDEHG K+ + Sbjct: 1 MAQRNSFYITTAISYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGLKMIQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ G+ T V +N+ FRDM D +SYD FIRT+E++HH + + +WK++ GDIY Sbjct: 61 TAQKEGIETHVLAARNAGRFRDMDDRFGVSYDRFIRTSEEQHHRSVQEVWKRMQANGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 Y+GWYS+RDEAYY +DE G D Q +PV+W+EE+ YFF+LSAYQD+LL Y Sbjct: 121 LDSYAGWYSVRDEAYYAEDETIVGEDNVRRGPQGSPVEWVEEKSYFFKLSAYQDRLLKLY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E P+FI P RRNEVISFVK GLKDLS+SR TFDWG+++P DP+++MYVW+DALTNY+T Sbjct: 181 EDQPDFIGPDSRRNEVISFVKGGLKDLSVSRTTFDWGVEVPGDPEHVMYVWVDALTNYIT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 G+ D D + ++WPAD+HVIGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ +KG Sbjct: 241 GVGFPDETD-ANWRYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPVQKRVYAHGFLFNKG 299 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKS+GN++DP + ++ GVD +RYF +RE+ G DG Y+ + + R+NADLAN +GN Sbjct: 300 EKMSKSVGNIVDPFNLADQYGVDQVRYFFLREVPFGSDGSYNHEAIVNRINADLANDLGN 359 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L RS++MI K + +P G F+++D+++L++ ++ R M Q IH+AL V ++ Sbjct: 360 LAQRSLTMIAKQCEAKVPEHGDFSDADKAMLAMADGMIAPARTAMATQQIHQALNAVWAV 419 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V+E +RYF + PW L KT+P R TVLYVT EV+RQ+ IL Q +P A K+ DIL VA Sbjct: 420 VAEANRYFAGEAPWALAKTDPPRQKTVLYVTAEVLRQIGILAQPAIPGSATKLLDILGVA 479 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 + R F +L R+KPG L PIFPR++ Sbjct: 480 ADARDFAALATRIKPGTPLPAP-APIFPRYV 509 >gi|254469852|ref|ZP_05083257.1| methionyl-tRNA synthetase [Pseudovibrio sp. JE062] gi|211961687|gb|EEA96882.1| methionyl-tRNA synthetase [Pseudovibrio sp. JE062] Length = 517 Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust. Identities = 280/513 (54%), Positives = 372/513 (72%), Gaps = 4/513 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+TAI+YPN +PHIGHAYE I DVLARF RLDG +V F TGTD HGQK+ + Sbjct: 1 MTEKSPFYITTAISYPNGEPHIGHAYEAIATDVLARFQRLDGREVHFLTGTDVHGQKMLQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A G++ D+NS+ FR+M ++L S DDFI+T E+RH+ +C+ +W+K++D GDIY Sbjct: 61 TAVKEGMSPSDLADKNSKLFREMVEMLGCSNDDFIQTNEERHYKSCQAIWQKMADAGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y+GWYS+RDEAYY + E DG Y Q PV+W+EEE YFFRLSAY+DKL+ Y Sbjct: 121 KDSYAGWYSVRDEAYYQEGETEVREDGVRYGPQGTPVEWVEEESYFFRLSAYEDKLIELY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E +P+FI P RRNEV+SFVK GLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T Sbjct: 181 EKNPDFIGPNARRNEVMSFVKGGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYIT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY D DG AKFWPA+ H+IGKDI+RFHA+YWPAFL+SA +PLP++VF+HGF+ + G Sbjct: 241 ALGYPDM-DGDMAKFWPANAHIIGKDIIRFHAVYWPAFLMSAGVPLPERVFAHGFLFNSG 299 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKSLGNVI P +++E G+D +RYF +RE+ G+DG Y+ + + R+NADLAN IGN Sbjct: 300 EKMSKSLGNVIAPRDLVETYGLDQIRYFFLREVPFGQDGNYNHEAMVNRINADLANDIGN 359 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L RS+SMI K+ +G +P PG F+ D++IL +L++ R M Q IH ALA + S Sbjct: 360 LAQRSLSMIFKNCEGKLPVPGEFSADDKAILQQADEMLEKCRGFMAKQEIHHALACIWST 419 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V E +RYF +Q+PW LKKT P+R TVLY T E+IRQ+ IL Q +P A K+ D+L ++ Sbjct: 420 VGEANRYFASQEPWALKKTEPERMGTVLYTTAEIIRQVGILAQPVMPTSAGKLLDLLVLS 479 Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 D+ R F L + RL+ G L K +FPR++ Sbjct: 480 DDERSFAELGEAGRLQGGRELPKP-QGVFPRYV 511 >gi|85715531|ref|ZP_01046512.1| methionine--tRNA ligase [Nitrobacter sp. Nb-311A] gi|85697726|gb|EAQ35602.1| methionine--tRNA ligase [Nitrobacter sp. Nb-311A] Length = 695 Score = 588 bits (1517), Expect = e-166, Method: Compositional matrix adjust. Identities = 268/507 (52%), Positives = 362/507 (71%), Gaps = 4/507 (0%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+TAI YPN PHIGHAYE I D LARF RLDG DV F TGTDEHGQK+ + AQ Sbjct: 186 FYITTAIVYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGQKMVQTAQREN 245 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 ++ +N+ R + + L IS+D FIRT+E HH + + +WK++++ GDIY YSG Sbjct: 246 ISALELATRNAELLRKLDETLHISFDRFIRTSESAHHRSVQEIWKRMAENGDIYLSNYSG 305 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WYS+RDEAYY +DE G D Q PV+W+EE+ YFF+L++YQD+LL+ YES P+F Sbjct: 306 WYSVRDEAYYAEDETIVGEDNVRRGPQGTPVEWVEEKSYFFKLASYQDRLLALYESEPDF 365 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P RRNEV+SFVK GLKDLS+SR FDWGIK+PDDP+++MYVW+DALTNY+T G+ Sbjct: 366 IGPDSRRNEVVSFVKGGLKDLSISRTNFDWGIKVPDDPEHVMYVWVDALTNYITGVGF-P 424 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 N D S +FWPA +H+IGKDI+RFHA+YWPAFL+SA + LPK+V++HGF+ ++GEK+SKS Sbjct: 425 NEDESNWRFWPAGVHIIGKDIIRFHAVYWPAFLMSAGIALPKRVYAHGFLFNRGEKMSKS 484 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 +GNV+DP + + GVD +RYF +RE+ G DG Y+ + + R+NADLAN GNL RS+ Sbjct: 485 VGNVVDPFSLAAQYGVDQMRYFFLREVPFGHDGSYNHEAIVARINADLANDFGNLAQRSL 544 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 SMI K + G++P PG F++SD++IL+ ++ RE M+ Q IH+AL + ++V+E +R Sbjct: 545 SMIAKQHGGVLPEPGDFSDSDKAILAQADGMIAVAREAMKTQQIHQALNAIWAVVAEANR 604 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 YF + PW L KT+P R TVLYVT EV+RQ+AIL Q +P+ K+ DIL + + R F Sbjct: 605 YFAGEAPWVLAKTDPARQRTVLYVTAEVVRQIAILAQPAMPEACAKMLDILGIPTDERNF 664 Query: 487 QSLDQ--RLKPGFMLHKTFDPIFPRFL 511 L R+KPG ML P+FPR++ Sbjct: 665 AMLGGHVRIKPGTMLPPPV-PVFPRYV 690 >gi|162139845|ref|YP_318075.2| methionyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255] Length = 544 Score = 588 bits (1515), Expect = e-166, Method: Compositional matrix adjust. Identities = 269/509 (52%), Positives = 363/509 (71%), Gaps = 4/509 (0%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+TAI YPN PHIGHAYE I D LARF RLDG DV F TGTDEHGQK+ + AQ Sbjct: 33 DTFYITTAIVYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGQKMVQTAQR 92 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 ++ +N+ R + + LDIS+D FIRT+E HH + + +WK+++ GDIY Y Sbjct: 93 ENISALELATRNAELLRKLDEALDISFDRFIRTSESAHHRSVQDIWKRMAGNGDIYLSNY 152 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SGWYS+RDEAYY +DE G D Q PV+W+EE+ YFF+LSAY+D+LL+ YES P Sbjct: 153 SGWYSVRDEAYYAEDETVVGEDNVRRGPQGTPVEWVEEKSYFFKLSAYEDRLLALYESEP 212 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RRNEV+SFVK GLKDLS+SR TFDWG+K+P DP+++MYVW+DALTNY+T G+ Sbjct: 213 DFIGPDSRRNEVVSFVKGGLKDLSISRTTFDWGVKVPGDPEHVMYVWVDALTNYITGVGF 272 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D D S +FWPAD+H+IGKDI+RFHA+YWPAFL+SA + LPK+V++HGF+ ++GEK+S Sbjct: 273 PDE-DESNWRFWPADIHIIGKDIIRFHAVYWPAFLMSAGIALPKRVYAHGFLFNRGEKMS 331 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS+GNV+DP + + GVD +RYF +RE+ G+DG Y+ + + R+NADLAN GNL R Sbjct: 332 KSVGNVVDPFSLAAQYGVDQMRYFFLREVPFGQDGSYNHEAIVARINADLANDFGNLAQR 391 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 S+SMI K + G++P PG F+++D++IL+ ++ RE M Q IH+AL + S+V+E Sbjct: 392 SLSMIAKQHGGVLPEPGDFSDADKAILAQADGMIAIAREAMNTQQIHQALNAIWSVVAEA 451 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 +RYF + PW L KT+P R TVLYVT EV+RQ+AIL Q +P K+ DIL + + R Sbjct: 452 NRYFAGEAPWALAKTDPARQKTVLYVTAEVVRQIAILAQPAMPAACAKLLDILGIPADER 511 Query: 485 CFQSL--DQRLKPGFMLHKTFDPIFPRFL 511 F L D R++PG L P+FPR++ Sbjct: 512 NFAMLGGDIRIRPGSALPAPV-PVFPRYV 539 >gi|154248247|ref|YP_001419205.1| methionyl-tRNA synthetase [Xanthobacter autotrophicus Py2] gi|154162332|gb|ABS69548.1| methionyl-tRNA synthetase [Xanthobacter autotrophicus Py2] Length = 550 Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust. Identities = 272/513 (53%), Positives = 363/513 (70%), Gaps = 3/513 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + YI+TAIAYPN PH+GHAYE I D +ARF RLDG DV F TGTDEHG K+ + Sbjct: 33 MSAKPPFYITTAIAYPNGVPHMGHAYEAIATDCIARFKRLDGYDVRFLTGTDEHGIKMLQ 92 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ AGVT + + +N F M + ++S DDFIRTT++RHH + + +W K++ GDIY Sbjct: 93 TAQKAGVTPRELLARNVPRFEAMVEAFNLSIDDFIRTTQERHHASSQAIWAKMAANGDIY 152 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y+GWYS+RDEAYY +DE G Q PV+W+EEE YFFRLSAYQD+LL+YY Sbjct: 153 KSTYAGWYSVRDEAYYAEDETQLNEQGIRLGPQGTPVEWVEEESYFFRLSAYQDRLLAYY 212 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 +P FI+P RRNEV+SFV GL DLS+SR TFDWGI +P D ++IMYVW+DALTNY+T Sbjct: 213 AENPGFIMPEARRNEVVSFVSGGLTDLSISRTTFDWGIPVPGDDKHIMYVWVDALTNYIT 272 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY D +FWPA+LHVIGKDI+RFHA+YWPAFL SA L PK+VF HGF+ ++G Sbjct: 273 ALGYPDTEAELFKRFWPANLHVIGKDIIRFHAVYWPAFLWSAGLEAPKRVFGHGFLFNRG 332 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKS+GNVIDP ++ GVDA+RYF +RE++ G+DG Y + + R+NADLAN +GN Sbjct: 333 EKMSKSVGNVIDPFDLAATYGVDAIRYFFLREVSFGQDGSYSHEAIVARMNADLANDLGN 392 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L RS+SMI K+ DG++P PG + DE+IL++ +L++ RE M+ Q IH LA V ++ Sbjct: 393 LAQRSLSMIAKNLDGVVPQPGPLSPEDEAILALADGMLEKSREAMEGQAIHHYLAAVWNV 452 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V+E +RYF AQ PW L+KT+P R +TVL+VT E+IR++ IL+Q +P+ A ++ D++ V Sbjct: 453 VAEANRYFAAQAPWALRKTDPARMATVLWVTAELIREVGILVQPVMPESAARLLDLVVVP 512 Query: 481 DENRCFQSL--DQRLKPGFMLHKTFDPIFPRFL 511 + R F L RL G +L +FPR++ Sbjct: 513 ADERGFDRLGAGHRLPAGRVLPAPVG-VFPRYV 544 >gi|146340771|ref|YP_001205819.1| methionyl-tRNA synthetase [Bradyrhizobium sp. ORS278] gi|146193577|emb|CAL77594.1| Methionyl-tRNA synthetase (EC 6.1.1.10) [Bradyrhizobium sp. ORS278] Length = 705 Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust. Identities = 266/507 (52%), Positives = 363/507 (71%), Gaps = 4/507 (0%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++TAIAYPN PHIGHAYE I D +ARF RLDG DV F TGTDEHG K+ + AQN G Sbjct: 196 FYVTTAIAYPNGSPHIGHAYEAIATDAIARFARLDGKDVFFLTGTDEHGLKMVQTAQNEG 255 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T +N+ FR+M + L++S+D FIRTTE HH + + +W ++ + GDIY YSG Sbjct: 256 LTPSELAARNAGRFREMDERLNVSFDRFIRTTEPAHHKSVQAIWTRMLENGDIYADTYSG 315 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WYS+RDEAYY ++E G D Q PV+W+EE+ YFFRLSAYQDKLL+ YE+ P+F Sbjct: 316 WYSVRDEAYYAEEETVVGEDNVRRGPQGTPVEWVEEKSYFFRLSAYQDKLLALYENQPDF 375 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P RRNE+ SFV+ GLKDLS+SR TFDWG+++P D +++MYVW+DALTNY+T G+ D Sbjct: 376 IGPDARRNEITSFVRGGLKDLSISRTTFDWGVRVPHDDEHVMYVWVDALTNYITGVGFPD 435 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D + KFWPAD+HVIGKDI+RFHA+YWPAFL+SA +P+PK+V++HGF+ ++GEK+SKS Sbjct: 436 END-ANWKFWPADVHVIGKDIIRFHAVYWPAFLMSAGVPVPKRVYAHGFLFNRGEKMSKS 494 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 +GNV+DP + ++ GVD LRYF +RE+ G+DG Y+ + + R+NADLAN +GNL RS+ Sbjct: 495 VGNVVDPFNLADQYGVDQLRYFFLREVPFGQDGNYNHEAIVARINADLANDLGNLAQRSL 554 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 SMI K + G++P PG F+ +D++IL+ ++ R+ M Q IH+ L V S+V+E +R Sbjct: 555 SMITKQFGGVLPEPGEFSANDQAILAEADAMIGAARKAMATQQIHQWLNAVWSVVAEANR 614 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 YF + PW L KT+P R TVLYVT EVIRQ+AIL Q +P + K+ D L + ++ R F Sbjct: 615 YFAGEAPWALAKTDPKRQHTVLYVTAEVIRQVAILTQPVMPAASAKLLDSLGIPEDERSF 674 Query: 487 QSL--DQRLKPGFMLHKTFDPIFPRFL 511 L + R+ PG L +FPR++ Sbjct: 675 ARLGGEVRIAPGTQLPAP-QAVFPRYI 700 >gi|254563518|ref|YP_003070613.1| methionyl-tRNA synthetase [Methylobacterium extorquens DM4] gi|254270796|emb|CAX26801.1| methionyl-tRNA synthetase [Methylobacterium extorquens DM4] Length = 522 Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust. Identities = 279/512 (54%), Positives = 364/512 (71%), Gaps = 5/512 (0%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K E I+TAI+YPN PHIGHAYE+I D +ARFHRLDG DVLFTTGTDEHG KI + Sbjct: 6 KANEPFLITTAISYPNGAPHIGHAYEVIATDAIARFHRLDGRDVLFTTGTDEHGLKIQQT 65 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A AGVT + FVD + F+ +AD LD SYD FIRTTE H+ + LW+++ GDIY Sbjct: 66 ASRAGVTPRAFVDDMAGRFKAVADRLDCSYDRFIRTTEADHYAAAQELWRRMEANGDIYL 125 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180 Y+GWYS+RDEAYY++ E G DG + + + PV+WMEEE Y FRLS YQ+ LL Y Sbjct: 126 AKYAGWYSVRDEAYYDEAETALGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEPLLKLY 185 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 P+F+ P R NEV SFV+SGLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT Sbjct: 186 AEQPDFLGPETRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVDALTNYLT 245 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TG+ D A+FWPA LH+IGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF L +G Sbjct: 246 VTGFPDA-KAPNARFWPASLHIIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG 304 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKSLGNV+DP++++ GVD +RYFL+RE G DG YD D + R+NADLAN +GN Sbjct: 305 EKMSKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGSDGNYDHDAIINRINADLANDLGN 364 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L RS+SMI K+ +G +P PGAFTE+DE +L+ + ++ R MQN +H LA++ ++ Sbjct: 365 LAQRSLSMIAKNCEGTVPEPGAFTEADERLLAAAGALPEKARGLMQNLALHAILAEIWAV 424 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V E +RYF +++PW+L+K++P R +TVLYVTVE +R++ +++Q FVP + D+L V Sbjct: 425 VGEANRYFASEEPWKLRKSDPARMNTVLYVTVETLRRVGLMVQPFVPTAGAALLDLLAVP 484 Query: 481 DENR--CFQSLDQRLKPGFMLHKTFDPIFPRF 510 R F + RL+ G L PIFPRF Sbjct: 485 VNARSFAFTGAEHRLQGGTALPAP-APIFPRF 515 >gi|163853584|ref|YP_001641627.1| methionyl-tRNA synthetase [Methylobacterium extorquens PA1] gi|163665189|gb|ABY32556.1| methionyl-tRNA synthetase [Methylobacterium extorquens PA1] Length = 522 Score = 585 bits (1508), Expect = e-165, Method: Compositional matrix adjust. Identities = 278/512 (54%), Positives = 364/512 (71%), Gaps = 5/512 (0%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K E I+TAI+YPN PHIGHAYE+I D +ARFHRLDG DVLFTTGTDEHG KI + Sbjct: 6 KANEPFLITTAISYPNGAPHIGHAYEVIATDAIARFHRLDGRDVLFTTGTDEHGLKIQQT 65 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A AGVT + FVD + F+ +AD LD SYD FIRTTE H+ + LW+++ GDIY Sbjct: 66 ASRAGVTPRAFVDDMAGRFKAVADRLDCSYDRFIRTTEADHYAAAQELWRRMEANGDIYL 125 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180 Y+GWYS+RDEAYY++ E G DG + + + PV+WMEEE Y FRLS YQ+ LL Y Sbjct: 126 AKYAGWYSVRDEAYYDEAETALGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEPLLKLY 185 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 P+F+ P R NEV SFV+SGLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT Sbjct: 186 AEQPDFLGPETRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVDALTNYLT 245 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TG+ D A+FWPA LH+IGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF L +G Sbjct: 246 VTGFPDA-QAPNARFWPASLHIIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG 304 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKSLGNV+DP++++ GVD +RYFL+RE G DG YD + + R+NADLAN +GN Sbjct: 305 EKMSKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGSDGNYDHEAIINRINADLANDLGN 364 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L RS+SMI K+ +G +P PGAFTE+DE +L+ + ++ R MQN +H LA++ ++ Sbjct: 365 LAQRSLSMIAKNCEGTVPEPGAFTEADERLLAAAGALPEKARGLMQNLALHAILAEIWAV 424 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V E +RYF +++PW+L+K++P R +TVLYVTVE +R++ +++Q FVP + D+L V Sbjct: 425 VGEANRYFASEEPWKLRKSDPARMNTVLYVTVETLRRVGLMVQPFVPTAGAALLDLLAVP 484 Query: 481 DENR--CFQSLDQRLKPGFMLHKTFDPIFPRF 510 R F + RL+ G L PIFPRF Sbjct: 485 VNARSFAFTGAEHRLQGGTALPAP-APIFPRF 515 >gi|92117538|ref|YP_577267.1| methionyl-tRNA synthetase [Nitrobacter hamburgensis X14] gi|91800432|gb|ABE62807.1| methionyl-tRNA synthetase [Nitrobacter hamburgensis X14] Length = 659 Score = 585 bits (1508), Expect = e-165, Method: Compositional matrix adjust. Identities = 267/507 (52%), Positives = 359/507 (70%), Gaps = 4/507 (0%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+TAI YPN PHIGHAYE I DVLARF RLDG DV F TGTDEHGQK+ + AQ Sbjct: 150 FYITTAIVYPNGAPHIGHAYEAIATDVLARFQRLDGKDVFFLTGTDEHGQKMVQTAQKEN 209 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 ++ +N+ R + + L+IS++ FIRT+E HH + + +WK+++ GDIY Y+G Sbjct: 210 ISALELATRNAELLRKLDETLNISFNRFIRTSEPAHHHSVQEIWKRMAANGDIYLSSYAG 269 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WYS+RDEAYY +DE G D Q PV+W+EE+ YFF+LSAYQD+LL+ YES P+F Sbjct: 270 WYSVRDEAYYAEDETVVGEDNVRRGPQGTPVEWVEEKSYFFKLSAYQDRLLALYESQPDF 329 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P RRNEVISFVK GLKDLS+SR TFDWG+K+PDDP+++MYVW+DALTNY+T G+ D Sbjct: 330 IGPDSRRNEVISFVKGGLKDLSISRTTFDWGVKVPDDPEHVMYVWVDALTNYITGVGFPD 389 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D ++WPADLH+IGKDI+RFHA+YWPAFL+SA +PL K+V++HGF+ ++GEK+SKS Sbjct: 390 END-KDWRYWPADLHIIGKDIIRFHAVYWPAFLMSAGIPLQKRVYAHGFLFNRGEKMSKS 448 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 +GNV+DP + + GVD +RYF +RE+ G+DG Y+ + + R+NADLAN GNL RS+ Sbjct: 449 VGNVVDPFNLAAQYGVDQVRYFFLREVPFGQDGSYNHEAIVARINADLANDFGNLAQRSL 508 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 SMI K +DG +P PG F+++D++IL+ ++ RE M Q IH+AL V ++V+E +R Sbjct: 509 SMIAKQHDGALPEPGDFSDNDKAILAQADGMIAVAREAMNTQQIHQALNAVWAVVAEANR 568 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 YF + PW L KT+P R TVLYV EV+RQ+AIL Q +P + D+L + R F Sbjct: 569 YFAGEAPWVLAKTDPARQKTVLYVAAEVVRQIAILAQPAMPASCATMLDLLGIPASERNF 628 Query: 487 QSLDQ--RLKPGFMLHKTFDPIFPRFL 511 L R+KPG L P+FPR++ Sbjct: 629 AMLGGHVRIKPGTTLPPPV-PVFPRYV 654 >gi|158423799|ref|YP_001525091.1| methionyl-tRNA synthetase [Azorhizobium caulinodans ORS 571] gi|158330688|dbj|BAF88173.1| methionyl-tRNA synthetase [Azorhizobium caulinodans ORS 571] Length = 526 Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust. Identities = 277/512 (54%), Positives = 361/512 (70%), Gaps = 1/512 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + YI+TAIAYPN PH+GHAYE I D +ARF RLDG DV F TGTDEHG K+ + Sbjct: 7 MSSKRPFYITTAIAYPNGVPHMGHAYEAIATDCIARFKRLDGYDVRFLTGTDEHGIKMLQ 66 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ AG+T + +D+N F+ M ++S DDFIRTTE+RH + + +W++++ KGDIY Sbjct: 67 TAQKAGLTPRELLDRNVPAFKAMGPAFNLSNDDFIRTTEERHIKSSQAIWERMAAKGDIY 126 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K YSGWYS+RDEAYY +DE Q PV+W+EEE YFFRLSAYQ KLL +Y Sbjct: 127 KSTYSGWYSVRDEAYYAEDETTVNEQNVRLGPQGTPVEWVEEESYFFRLSAYQQKLLDFY 186 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 ++P FI+P RRNEV+SFV GL+DLS+SR TFDWGI +P DP +IMYVW+DALTNY+T Sbjct: 187 AANPGFIMPEARRNEVVSFVSGGLQDLSISRTTFDWGIPVPGDPAHIMYVWVDALTNYIT 246 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY D KFWPADLHVIGKDI+RFHA+YWPAFL SA L PK+VF HGF+ ++G Sbjct: 247 ALGYPDTDAELFRKFWPADLHVIGKDIIRFHAVYWPAFLWSAGLEPPKRVFGHGFLFNRG 306 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKS+GNV+DP ++E GVDA RYF +RE++ G+DG Y + + R+NADLAN +GN Sbjct: 307 EKMSKSVGNVVDPFGLVETYGVDATRYFFLREVSFGQDGSYSHEAIVNRMNADLANDLGN 366 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L RS+SMI K+ DG++P PG + DE+IL++ +L++ RE M+ Q IH+ LA V ++ Sbjct: 367 LAQRSLSMISKNLDGVVPEPGPLSPEDEAILALADGMLEKAREAMEVQAIHQYLAAVWAV 426 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V+E +RYF AQ PW L+KT+P R TVL+ T EVIRQ+AIL Q +P+ A K+ D+L V Sbjct: 427 VAEANRYFAAQAPWALRKTDPKRMETVLWTTAEVIRQVAILAQPVMPESAGKMLDLLVVP 486 Query: 481 DENRCFQSLDQRLK-PGFMLHKTFDPIFPRFL 511 E R F L + PG +FPR++ Sbjct: 487 AEQRGFDVLGGTFRLPGGTAIPAPTGVFPRYV 518 >gi|148255487|ref|YP_001240072.1| methionyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] gi|146407660|gb|ABQ36166.1| methionyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] Length = 722 Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust. Identities = 267/507 (52%), Positives = 360/507 (71%), Gaps = 4/507 (0%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++TAIAYPN PHIGHAYE I D +ARF RLDG DV F TGTDEHG K+ + AQN G Sbjct: 213 FYVTTAIAYPNGNPHIGHAYEAIATDAIARFARLDGKDVFFLTGTDEHGLKMVQTAQNEG 272 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T +N+ FRDM + L++S+D FIRTTE HH + + +W ++ + GDIY Y+G Sbjct: 273 LTPGELATRNAGRFRDMDERLNVSFDRFIRTTEPAHHKSVQAIWNRMLENGDIYADTYAG 332 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WYS+RDEAYY +DE G D Q PV+W+EE+ YFFRLSAYQD+LL+ YES P+F Sbjct: 333 WYSVRDEAYYAEDETVVGEDNVRRGPQGTPVEWVEEKSYFFRLSAYQDRLLALYESQPDF 392 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P RRNE+ISFVK GLKDLS+SR TFDWG+++P D +++MYVW+DALTNY+T G+ D Sbjct: 393 IGPDARRNEIISFVKGGLKDLSISRTTFDWGVRVPHDDEHVMYVWVDALTNYITGVGFPD 452 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D + K+WPAD+HVIGKDI+RFHA+YWPAFL+SA +P+PK+V++HGF+ ++GEK+SKS Sbjct: 453 END-ANWKYWPADVHVIGKDIIRFHAVYWPAFLMSAGVPVPKRVYAHGFLFNRGEKMSKS 511 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 +GNV+DP + ++ GVD LRYF +RE+ G+DG Y+ + + R+NADLAN +GNL RS+ Sbjct: 512 VGNVVDPFNLADQYGVDQLRYFFLREVPFGQDGNYNHEAIVARINADLANDLGNLAQRSL 571 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 SMI K G +P PG F+ +D +IL+ ++ R+ M Q IH+ L V S+V+E +R Sbjct: 572 SMIAKQLGGQLPEPGEFSANDRAILAEADAMIGAARKAMATQQIHQWLNAVWSVVAEANR 631 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 YF + PW L KT+P R TVLYVT EVIRQ+AIL Q +P + K+ D L + ++ R F Sbjct: 632 YFAGEAPWALAKTDPKRQHTVLYVTAEVIRQVAILTQPVMPTASAKLLDSLGIPEDERNF 691 Query: 487 QSL--DQRLKPGFMLHKTFDPIFPRFL 511 L + R+ G L +FPR++ Sbjct: 692 ARLGGEIRIAAGTQLPAP-QAVFPRYI 717 >gi|90424203|ref|YP_532573.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB18] gi|90106217|gb|ABD88254.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB18] Length = 522 Score = 578 bits (1491), Expect = e-163, Method: Compositional matrix adjust. Identities = 272/510 (53%), Positives = 360/510 (70%), Gaps = 3/510 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ST I YPN PHIGHAY +++D +ARF RLDG DV F TGTDEHG K+ + A Sbjct: 9 RPAYFLSTPIFYPNGVPHIGHAYTAMVSDAIARFQRLDGYDVRFLTGTDEHGLKMQQTAI 68 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T D+NS FRDM L+ISYDD+IRTTE RH +C+ LW I + GDIY Sbjct: 69 AEGLTPLQLADRNSARFRDMMAALNISYDDYIRTTEPRHERSCQALWTAIENNGDIYLDK 128 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+R EAY+++ E G DG +PV+W EEE YFFRLSAYQDKLL Y Sbjct: 129 YAGWYSVRQEAYFDEAETTVGEDGVRREPLGSPVEWTEEETYFFRLSAYQDKLLELYAKV 188 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+F+LP ER NEV SFVK GL+DLS+SR TFDWGIK+P P+++MYVWIDALTNY+T G Sbjct: 189 PDFVLPRERLNEVASFVKGGLQDLSISRTTFDWGIKVPGAPRHVMYVWIDALTNYITGAG 248 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D S ++WPA LHVIGKDI+RFHA+YWPAFL+SA + +P++VFSHGF+L++GEK+ Sbjct: 249 YPDVDSDSFKRYWPASLHVIGKDIVRFHAVYWPAFLMSAGVAVPQRVFSHGFLLNRGEKM 308 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNV+DP E+ ++ GVD +RYF +RE++ G+DG Y+ + + R NADLAN +GNL Sbjct: 309 SKSVGNVVDPFEMAKQYGVDQMRYFFMREVSFGQDGSYNHEAIVNRTNADLANDLGNLAQ 368 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS++MI K G++P PG F+++D++IL+ +++ R M Q IH L V ++V+E Sbjct: 369 RSLTMIGKQLGGVLPEPGDFSDNDKAILAQADAMIELARTAMATQQIHHMLNAVWAVVAE 428 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF + PW L KT+P R TVLYVT EV+RQ+AIL Q +P A K+ D L +A+E Sbjct: 429 ANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQVAILAQPVMPASAAKLLDSLGIAEEE 488 Query: 484 RCFQSLD--QRLKPGFMLHKTFDPIFPRFL 511 R F L +R++PG L PIFPR++ Sbjct: 489 RDFTHLGGHERIRPGTPLPAP-APIFPRYV 517 >gi|163760146|ref|ZP_02167229.1| methionyl-tRNA synthetase [Hoeflea phototrophica DFL-43] gi|162282545|gb|EDQ32833.1| methionyl-tRNA synthetase [Hoeflea phototrophica DFL-43] Length = 514 Score = 578 bits (1491), Expect = e-163, Method: Compositional matrix adjust. Identities = 271/509 (53%), Positives = 363/509 (71%), Gaps = 5/509 (0%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E+ YI+T I YPN PHIGHAY I DVLARF RLDG DV F +GTDEHGQK+ + A+ Sbjct: 4 ERFYITTPIFYPNGVPHIGHAYTAIATDVLARFQRLDGKDVFFLSGTDEHGQKMQQTAEQ 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ D+NS FRDM + LD S DDFIRTTE+RH + + LWK++ GDIY G Y Sbjct: 64 EGIKPIALADKNSAVFRDMLERLDCSNDDFIRTTEERHKASVQELWKRMEANGDIYLGKY 123 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWYS+R EAY+++ E G DG +PV+W+EEE Y+FRLSAY DKLL +E +P Sbjct: 124 GGWYSVRQEAYFDEGETTLGEDGIRREPLGSPVEWVEEESYYFRLSAYGDKLLELFEKNP 183 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 EF+ P ERRNEV SFVKSGLKDLS+SR TFDWG+ +P + +++MYVW+DALTNY+T G+ Sbjct: 184 EFVAPAERRNEVASFVKSGLKDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYITAAGF 243 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D K +WPA +H+IGKDI+RFHA+YWPAFL+SA L LP KVF+HGF+L KGEK+S Sbjct: 244 PDE-TSEKWNYWPA-IHMIGKDIVRFHAVYWPAFLMSAGLELPAKVFAHGFLLVKGEKMS 301 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS+GNV+DP +I+ G+D +RYF +RE+ G+DG Y + + R+N+DLANGIGNL SR Sbjct: 302 KSIGNVVDPFALIDHYGLDQVRYFFMREVPFGQDGSYSPEAIATRINSDLANGIGNLTSR 361 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 +SMI K+ DG +P G T+ D+++L +V++ R +M + IH+AL +I +V++ Sbjct: 362 CLSMINKNCDGKVPECGVLTDPDKAMLETADKVIESARADMADFQIHKALTSIIDVVADG 421 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 DRYF +Q+PW LKKT+P R TVLY+T E +RQ++ILL F+P+ A K+ D++ + R Sbjct: 422 DRYFASQEPWALKKTDPARMETVLYITAETVRQISILLLPFMPQSAGKLLDLVAAPADKR 481 Query: 485 CFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 F +L + RL PG + K PIFPR++ Sbjct: 482 DFAALGETGRLAPGTPIDKP-TPIFPRYV 509 >gi|240141004|ref|YP_002965484.1| methionyl-tRNA synthetase [Methylobacterium extorquens AM1] gi|240010981|gb|ACS42207.1| methionyl-tRNA synthetase [Methylobacterium extorquens AM1] Length = 522 Score = 578 bits (1490), Expect = e-163, Method: Compositional matrix adjust. Identities = 278/512 (54%), Positives = 365/512 (71%), Gaps = 5/512 (0%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K E I+TAI+YPN PHIGHAYE+I D +ARFHRLDG DVLFTTGTDEHG KI + Sbjct: 6 KANEPFLITTAISYPNGAPHIGHAYEVIATDAIARFHRLDGRDVLFTTGTDEHGLKIQQT 65 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A AGVT + FVD + F+ +AD LD SYD FIRTTE H+ + LW+++ GDIY Sbjct: 66 ASRAGVTPRAFVDDMAGRFKAVADRLDCSYDRFIRTTEADHYAAAQELWRRMEANGDIYL 125 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180 Y+GWYS+RDEAYY++ E G DG + + + PV+WMEEE Y FRLS YQ+ LL Y Sbjct: 126 AKYAGWYSVRDEAYYDEAETALGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEPLLKLY 185 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 P+F+ P R NEV SFV+SGLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT Sbjct: 186 AEQPDFLGPETRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVDALTNYLT 245 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TG+ D A+FWPA LH+IGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF L +G Sbjct: 246 VTGFPDA-QAPNARFWPASLHIIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG 304 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKSLGNV+DP++++ GVD +RYFL+RE G DG YD + + R+NADLAN +GN Sbjct: 305 EKMSKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGSDGNYDHEAIINRINADLANDLGN 364 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L RS+SMI K+ +G +P PGAFTE+DE +L+ + + ++ R MQN +H LA++ ++ Sbjct: 365 LAQRSLSMIAKNCEGTVPEPGAFTEADERLLAAAAALPEKARGLMQNLALHAILAEIWAV 424 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V E +RYF +++PW+L+K++P R +TVLYVTVE +R++ +++Q FVP + D+L V Sbjct: 425 VGEANRYFASEEPWKLRKSDPARMNTVLYVTVETLRRVGLMVQPFVPTAGAALLDLLAVP 484 Query: 481 DENR--CFQSLDQRLKPGFMLHKTFDPIFPRF 510 R F + RL+ G L PIFPRF Sbjct: 485 VNARSFAFTGAEYRLQGGTALPAP-APIFPRF 515 >gi|218532446|ref|YP_002423262.1| methionyl-tRNA synthetase [Methylobacterium chloromethanicum CM4] gi|218524749|gb|ACK85334.1| methionyl-tRNA synthetase [Methylobacterium chloromethanicum CM4] Length = 522 Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust. Identities = 277/512 (54%), Positives = 364/512 (71%), Gaps = 5/512 (0%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K E I+TAI+YPN PHIGHAYE+I D +ARFHRLDG DVLFTTGTDEHG KI + Sbjct: 6 KANEPFLITTAISYPNGAPHIGHAYEVIATDAIARFHRLDGRDVLFTTGTDEHGLKIQQT 65 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A AGVT + FVD + F+ +AD LD SYD FIRTTE H+ + LW+++ GDIY Sbjct: 66 ASRAGVTPRAFVDDMAGRFKAVADRLDCSYDRFIRTTEADHYAAAQELWRRMEANGDIYL 125 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180 Y+GWYS+RDEAYY++ E G DG + + + PV+WMEEE Y FRLS YQ+ LL Y Sbjct: 126 AKYAGWYSVRDEAYYDEAETTLGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEPLLKLY 185 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 P+F+ P R NEV SFV+SGLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT Sbjct: 186 AEQPDFLGPETRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVDALTNYLT 245 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TG+ D A+FWPA LH+IGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF L +G Sbjct: 246 VTGFPDA-QAPNARFWPASLHIIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG 304 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKSLGNV+DP++++ GVD +RYFL+RE G DG YD + + R+NADLAN +GN Sbjct: 305 EKMSKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGSDGNYDHEAIINRINADLANDLGN 364 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L RS+SMI K+ +G +P PGAFTE+DE +L+ + + ++ R MQN +H LA++ ++ Sbjct: 365 LAQRSLSMITKNCEGAVPEPGAFTEADERLLAAAAALPEKARGLMQNLALHAILAEIWAV 424 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V E +RYF +++PW+L+K++P R +TVLYVTVE +R++ +++Q FVP + D+L V Sbjct: 425 VGEANRYFASEEPWKLRKSDPARMNTVLYVTVETLRRVGLMVQPFVPTAGAALLDLLAVP 484 Query: 481 DENR--CFQSLDQRLKPGFMLHKTFDPIFPRF 510 R F + L+ G L PIFPRF Sbjct: 485 VNARSFAFTGAEHSLQGGTALPAP-APIFPRF 515 >gi|319405650|emb|CBI79273.1| Methionyl-tRNA synthetase [Bartonella sp. AR 15-3] Length = 513 Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust. Identities = 266/510 (52%), Positives = 371/510 (72%), Gaps = 4/510 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+ YI+T I YPN+ PHIGHAY I++D LARF + DG +V F +GTDEHG K+ + AQ Sbjct: 2 RDIYYITTPIFYPNSAPHIGHAYNAIVSDALARFQKADGKNVFFLSGTDEHGLKMQQTAQ 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 +T + D+NS F+ M +L+ S +DFIRTTE+RHH C+ LWKK+ KGDIY GC Sbjct: 62 MLNMTPQQLADRNSAVFQKMLAMLNCSNNDFIRTTEERHHKACQELWKKMEAKGDIYLGC 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y+GWYS+R EAYY + + +G + +PV+W EEE YFFRLS Y+ LL +YE Sbjct: 122 YAGWYSVRQEAYYEEKDTKIDQEGIRREKELGSPVEWNEEESYFFRLSRYEKALLEHYEK 181 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 +P+FI P ERRNE+I+FVKSGLKDLS+SR TFDWGI++P +P+++MYVW+DALTNYLT Sbjct: 182 YPDFIGPNERRNEIINFVKSGLKDLSISRTTFDWGIRVPGNPKHVMYVWVDALTNYLTAV 241 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 + D + K +FWPAD+H+IGKDI+RFHA+YWPAFL+SA + LPK++F+HGF+L++G K Sbjct: 242 DFFDE-NSKKRRFWPADIHIIGKDIIRFHAVYWPAFLMSAGIELPKRIFAHGFLLNRGAK 300 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNV+DP E++E G+D +RYF +RE+ G+DG Y+ D R+NADLAN +GNL Sbjct: 301 MSKSVGNVVDPFEMVERYGLDQVRYFFLREVPFGQDGSYNHDNFVNRINADLANDLGNLA 360 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 RS+SMI K+ + IPTP AF DE +L +VL+ +R M +Q H AL+ + S+V+ Sbjct: 361 QRSLSMIEKNCNMKIPTPAAFLIQDEQLLKQSLQVLEIVRRTMLDQAPHLALSAIFSVVA 420 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + +RYF +++PW L+K NP+R STVLY+T+EV+R++ I+L F+P+ A K+ D L VA+E Sbjct: 421 DANRYFASEEPWSLRKNNPERFSTVLYITLEVLRRVGIMLLPFIPQSAAKLLDSLAVAEE 480 Query: 483 NRCFQSL-DQRLKPGFMLHKTFDPIFPRFL 511 +R + D R+K +L PIFPR++ Sbjct: 481 DRLLHHISDLRIKEETVLSPPV-PIFPRYI 509 >gi|298291756|ref|YP_003693695.1| methionyl-tRNA synthetase [Starkeya novella DSM 506] gi|296928267|gb|ADH89076.1| methionyl-tRNA synthetase [Starkeya novella DSM 506] Length = 524 Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust. Identities = 270/509 (53%), Positives = 358/509 (70%), Gaps = 1/509 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + YI+TAI YPN PHIGHAYE I AD LARF +LDG DV F TGTDEHG K+A+ A+ Sbjct: 8 KPAFYITTAIDYPNGAPHIGHAYEKIAADALARFKKLDGYDVFFLTGTDEHGLKMAQTAE 67 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + +N+ F++M +L + YD FIRTT++ H + + +W+++ + GDIY G Sbjct: 68 KQGLTPIEWATKNATRFKEMDALLGVDYDRFIRTTDEDHILSSQAIWQRMVEAGDIYLGA 127 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 YSGWYS+RDEAYY +DE ADG Q PV+W EE+ YFFRLSAYQ KLL YY++H Sbjct: 128 YSGWYSVRDEAYYAEDETTVNADGVRLGPQGTPVEWTEEKSYFFRLSAYQQKLLDYYDAH 187 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNEV SFV+SGL+DLS+SR TF WGI +P D ++MYVW+DALTNY+T G Sbjct: 188 PDFIRPDVRRNEVTSFVRSGLQDLSISRTTFTWGIPVPGDEAHVMYVWVDALTNYITGVG 247 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D S +FWPADLH+IGKDI+RFHA+YWPAFL+SA + PK VF+HGFI ++GEK+ Sbjct: 248 YPDTDSASFKRFWPADLHIIGKDIIRFHAVYWPAFLMSAGIAPPKTVFAHGFIHNRGEKM 307 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP ++ + GVDALRYFL+REI G+DG Y + + R NADLAN +GNL Sbjct: 308 SKSVGNVIDPFDLAKAYGVDALRYFLLREIPFGQDGSYSHEAIVARTNADLANDLGNLAQ 367 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ G +P+PG D IL+ + ++RE M+ Q IH+AL + ++V++ Sbjct: 368 RSLSMIAKNLSGTLPSPGPLAPDDAEILASADAMGPKVREAMEAQQIHQALGVIWAVVAD 427 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF A PWEL+KT+P+R TVL+ T EVIRQ+A+L Q FVP A K+ D+L ++ + Sbjct: 428 ANRYFAASAPWELRKTDPERFGTVLWTTAEVIRQVALLAQPFVPTSAAKLLDLLDISSDA 487 Query: 484 RCFQS-LDQRLKPGFMLHKTFDPIFPRFL 511 R F S G + P+FPR++ Sbjct: 488 RDFASLGGAGRLAGGTVLPAPAPVFPRYV 516 >gi|154253553|ref|YP_001414377.1| methionyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] gi|154157503|gb|ABS64720.1| methionyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] Length = 520 Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust. Identities = 268/514 (52%), Positives = 355/514 (69%), Gaps = 4/514 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + YI+TAI+YPN PHIGHAYE+I DV+AR+ RLDG DV F TG D+HGQK+A+ Sbjct: 1 MSAPKAFYITTAISYPNGPPHIGHAYEVITTDVIARYKRLDGYDVRFLTGVDDHGQKMAQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G T + D+ + F M + L+IS DDFIRTTE RH C+ LW+KI+ KGDIY Sbjct: 61 TAKAKGTTPQALADEMAPKFLAMDERLNISNDDFIRTTEARHEKACQHLWEKIAAKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQ-YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 G YSGWYS+RDEA+Y++DE+ G GQ PV+WMEEE YFFRLSAYQ+KLL+ Sbjct: 121 TGTYSGWYSVRDEAFYDEDELTTGEGGQKLAPGTGTPVEWMEEETYFFRLSAYQEKLLAL 180 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTN 237 YES P+FI P RRNE+++FVK GL DLS+SR DWG+ +P DP ++MYVWIDALTN Sbjct: 181 YESQPDFIQPASRRNEILAFVKRGLNDLSISRARTKLDWGVGVPGDPNHVMYVWIDALTN 240 Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 Y+T GY D ++WPAD+H+IGKDI+RFHA+ WPA L++A + LPK+VF HGF+ Sbjct: 241 YITGLGYPDMDGDLFKRYWPADMHIIGKDIVRFHAVIWPAMLMAAEVALPKRVFGHGFLN 300 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 +GEK+SKS+GNVIDP + + GVD +RYF RE+ G DG Y D + R+NADLAN Sbjct: 301 VRGEKMSKSVGNVIDPFTITDTYGVDPIRYFFCREVTYGADGSYSHDTVVNRINADLAND 360 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 IGNL RS+SMI K+ G +P GAFT D+++L + + ++ RE M+ IH + +V Sbjct: 361 IGNLAQRSLSMIAKNCGGEVPAYGAFTAEDKAVLDAAAALPEKTREQMERLEIHSYVGEV 420 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++VSE +RYF Q+PW LKKT+P+R TVLYVT EV+R+ A++LQ +P K+ D+L Sbjct: 421 FAVVSEANRYFAGQEPWALKKTDPERMGTVLYVTAEVVRRCALMLQPVMPASIAKLLDLL 480 Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 V + R F + L PG L +FPR++ Sbjct: 481 AVPEGARAFSDIAASLTPGTALPAPAG-VFPRYV 513 >gi|27352779|dbj|BAC49781.1| methionyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] Length = 658 Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust. Identities = 262/507 (51%), Positives = 359/507 (70%), Gaps = 4/507 (0%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+TAIAYPN PHIGHAYE I D LARF RLDG DV F TGTDEHG K+ + AQN G Sbjct: 150 FYITTAIAYPNGNPHIGHAYEAIATDTLARFARLDGKDVFFLTGTDEHGLKMIQTAQNEG 209 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T +N+ F+ M + L++S+D FIRTTE++HH + + +W+++ GDIY Y+G Sbjct: 210 LTPSALAARNAARFKAMDERLNVSFDRFIRTTEEQHHRSTQEIWRRMEANGDIYADTYAG 269 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WYS+RDEAYY +DE DG Q PV+W+EE+ YFFRLSAYQ+KLL Y +P+F Sbjct: 270 WYSVRDEAYYAEDETRLNDDGVRLGPQGTPVEWVEEKSYFFRLSAYQEKLLKLYTDNPDF 329 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P RRNEV+SFVK GL+DLS+SR TFDWG+K+P D +++MYVW+DALTNY+T G+ D Sbjct: 330 IGPDSRRNEVVSFVKGGLRDLSISRTTFDWGVKVPGDEEHVMYVWVDALTNYITGVGFPD 389 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D ++WPAD+H+IGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ ++GEK+SKS Sbjct: 390 ESD-KNWRYWPADVHIIGKDIIRFHAVYWPAFLMSAGIPVQKRVYAHGFLFNRGEKMSKS 448 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 +GNV+DP + ++ GVD +RYF +RE+ G+DG Y+ + + R+NADLAN +GNL RS+ Sbjct: 449 VGNVVDPFNLADQYGVDQMRYFFLREVPFGQDGNYNHEAIVARINADLANDLGNLAQRSL 508 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 SMI K G++P PG F+++D++IL++ ++ RE M Q IH L V ++V+E +R Sbjct: 509 SMIAKQLGGVLPEPGEFSDNDKAILAMADGMIAASREAMATQQIHHWLNAVWAVVAEANR 568 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 YF + PW L KT+P R TVLYVT EV+RQ+AIL Q +P + + D L V R F Sbjct: 569 YFAGEAPWALAKTDPARQKTVLYVTAEVVRQIAILAQPAMPTASGLLLDSLGVPGGERNF 628 Query: 487 QSLD--QRLKPGFMLHKTFDPIFPRFL 511 +L +R+ PG L P FPR++ Sbjct: 629 AALGGAKRIAPGSTLPAP-TPAFPRYI 654 >gi|161511098|ref|NP_771156.2| methionyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] Length = 543 Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust. Identities = 262/507 (51%), Positives = 359/507 (70%), Gaps = 4/507 (0%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+TAIAYPN PHIGHAYE I D LARF RLDG DV F TGTDEHG K+ + AQN G Sbjct: 35 FYITTAIAYPNGNPHIGHAYEAIATDTLARFARLDGKDVFFLTGTDEHGLKMIQTAQNEG 94 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T +N+ F+ M + L++S+D FIRTTE++HH + + +W+++ GDIY Y+G Sbjct: 95 LTPSALAARNAARFKAMDERLNVSFDRFIRTTEEQHHRSTQEIWRRMEANGDIYADTYAG 154 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WYS+RDEAYY +DE DG Q PV+W+EE+ YFFRLSAYQ+KLL Y +P+F Sbjct: 155 WYSVRDEAYYAEDETRLNDDGVRLGPQGTPVEWVEEKSYFFRLSAYQEKLLKLYTDNPDF 214 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P RRNEV+SFVK GL+DLS+SR TFDWG+K+P D +++MYVW+DALTNY+T G+ D Sbjct: 215 IGPDSRRNEVVSFVKGGLRDLSISRTTFDWGVKVPGDEEHVMYVWVDALTNYITGVGFPD 274 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D ++WPAD+H+IGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ ++GEK+SKS Sbjct: 275 ESD-KNWRYWPADVHIIGKDIIRFHAVYWPAFLMSAGIPVQKRVYAHGFLFNRGEKMSKS 333 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 +GNV+DP + ++ GVD +RYF +RE+ G+DG Y+ + + R+NADLAN +GNL RS+ Sbjct: 334 VGNVVDPFNLADQYGVDQMRYFFLREVPFGQDGNYNHEAIVARINADLANDLGNLAQRSL 393 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 SMI K G++P PG F+++D++IL++ ++ RE M Q IH L V ++V+E +R Sbjct: 394 SMIAKQLGGVLPEPGEFSDNDKAILAMADGMIAASREAMATQQIHHWLNAVWAVVAEANR 453 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 YF + PW L KT+P R TVLYVT EV+RQ+AIL Q +P + + D L V R F Sbjct: 454 YFAGEAPWALAKTDPARQKTVLYVTAEVVRQIAILAQPAMPTASGLLLDSLGVPGGERNF 513 Query: 487 QSLD--QRLKPGFMLHKTFDPIFPRFL 511 +L +R+ PG L P FPR++ Sbjct: 514 AALGGAKRIAPGSTLPAP-TPAFPRYI 539 >gi|319407220|emb|CBI80859.1| Methionyl-tRNA synthetase [Bartonella sp. 1-1C] Length = 513 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 266/510 (52%), Positives = 367/510 (71%), Gaps = 4/510 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+ YI+T I YPN+ PHIGHAY I++D LARF + DG +V F +GTDEHG K+ + A+ Sbjct: 2 RDIYYITTPIFYPNSAPHIGHAYNAIVSDTLARFQKADGKNVFFLSGTDEHGLKMQQTAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 +T + D+NS F+ M VL+ S +DFIRTTE+RHH C+ LWKK+ KGDIY GC Sbjct: 62 MLNITPQQLADRNSAVFQKMLAVLNCSNNDFIRTTEERHHKACQELWKKMEAKGDIYLGC 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y+GWYS+R E+YY + + +G + +PV+W EEE YFFRLS Y+ LL YYE Sbjct: 122 YAGWYSVRQESYYEEKDTEIDQEGIRREKELGSPVEWNEEESYFFRLSRYEKALLQYYEK 181 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 +P+FI P ERRNE+ISFVKSGLKD+S+SR TFDWGI++P +P+++MYVW+DALTNYLT Sbjct: 182 YPDFIGPNERRNEIISFVKSGLKDISISRTTFDWGIRVPGNPKHVMYVWVDALTNYLTGI 241 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 + N K FWPAD+H+IGKDI RFHAIYWPAFL+SA + LPK++F HGF+L++G K Sbjct: 242 DFF-NETSKKRNFWPADVHIIGKDITRFHAIYWPAFLMSAEIELPKRIFVHGFLLNRGAK 300 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNV+DP E+++ G+D +RYF +REI G+DG Y+ D R+NADLAN +GNL Sbjct: 301 MSKSIGNVVDPFEMVDRYGLDQVRYFFLREIPFGQDGSYNHDNFVNRINADLANDLGNLA 360 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 RS+SM+ K+ + IPTP AF DE +L +VL+ +R+ M NQ H AL+ + S+V+ Sbjct: 361 QRSLSMVEKNCNMKIPTPAAFLIQDEQLLKQSFQVLEVVRQTMSNQAPHLALSAIFSVVA 420 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + +RYF ++PW L+K NP+R TVLY+T+EV+R++ I+L F+P+ A K+ D L +A+E Sbjct: 421 DANRYFANEEPWSLRKNNPERFFTVLYITLEVLRRVGIMLLPFIPQSATKLLDSLAIAEE 480 Query: 483 NRCFQSL-DQRLKPGFMLHKTFDPIFPRFL 511 +R + D R+K G +L PIFPR++ Sbjct: 481 DRLLHHISDLRIKEGTVL-PIPAPIFPRYI 509 >gi|170744506|ref|YP_001773161.1| methionyl-tRNA synthetase [Methylobacterium sp. 4-46] gi|168198780|gb|ACA20727.1| methionyl-tRNA synthetase [Methylobacterium sp. 4-46] Length = 515 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 269/510 (52%), Positives = 364/510 (71%), Gaps = 5/510 (0%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E+ I+TAI+YPN PHIGHAYE+I AD +ARF R+DG DV FTTGTDEHG KI + A Sbjct: 4 ERFTITTAISYPNGAPHIGHAYEVIAADAIARFKRIDGYDVFFTTGTDEHGLKIQQTAAK 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG++ + FVD + FR MA+ L+ +D FIRTT+ H + + LW+++ GDIY Y Sbjct: 64 AGISPRAFVDAMAPRFRTMAETLNCGFDRFIRTTDPDHIASSQALWRRMEAAGDIYLAKY 123 Query: 125 SGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 +GWYS+RDEAYY++ E+ G DG + PV+W+EEE YFFRLSAY D+LL++Y H Sbjct: 124 AGWYSVRDEAYYDEAELVLGQDGVRRAERTGTPVEWVEEESYFFRLSAYADRLLAHYAEH 183 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNEV+SFV+SGL+DLS+SR TFDWG+ +P P ++MYVW+DALTNY+T+ G Sbjct: 184 PDFIGPETRRNEVVSFVRSGLQDLSVSRTTFDWGVPVPGAPGHVMYVWVDALTNYITSCG 243 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 + D D + + WPADLHVIGKDI+RFHA+YWPAFL+SA +PLP++VF HGF+L +GEK+ Sbjct: 244 FPDEAD-PRWRRWPADLHVIGKDIIRFHAVYWPAFLMSAGVPLPRRVFGHGFLLSRGEKM 302 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNV+DPI + GVD LRYF++RE+ G+DG Y + + R NADLAN +GNL Sbjct: 303 SKSLGNVVDPIALAGLYGVDPLRYFVLREVPFGQDGNYSHEAIVNRTNADLANDLGNLAQ 362 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS++MI ++ DG +P PG E+D +IL+ + R M++ +H ALA++ ++V+E Sbjct: 363 RSLTMIARNCDGAVPRPGDLAEADRAILAAADALPAVARAAMEDYALHHALAEIWAVVAE 422 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF AQ+PW L+KT+P R +TVLY T E +R + IL+Q FVP A ++ D+L V E Sbjct: 423 ANRYFAAQEPWTLRKTDPARMATVLYCTAETLRAVGILVQPFVPAAACRLLDLLAVPGEA 482 Query: 484 RCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 R + + RL PG L PIFPRF+ Sbjct: 483 RGLAQVGEGGRLVPGTALPAP-SPIFPRFV 511 >gi|13470650|ref|NP_102219.1| methionyl-tRNA synthetase [Mesorhizobium loti MAFF303099] gi|25009388|sp|Q98MV8|SYM_RHILO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|14021392|dbj|BAB48005.1| methionyl-tRNA synthetase [Mesorhizobium loti MAFF303099] Length = 516 Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust. Identities = 268/510 (52%), Positives = 358/510 (70%), Gaps = 5/510 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK Y++T I YPN +PHIGHAY +I D LARF RLDG DV F TGTDEHG K+ + A+ Sbjct: 3 REKYYLTTPIFYPNGKPHIGHAYTVIATDALARFQRLDGKDVFFLTGTDEHGLKMQQTAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+NS FR M + + S D++IRTTE RH+ +C+ +WK ++ GDIY Sbjct: 63 KEGITPQALADRNSAIFRSMTEAVGGSNDEYIRTTEPRHYASCQAIWKAMAANGDIYLDR 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 YSGWYS+R EAY+++ E G DG +PV+W EEE YFFRLSAYQDKLL+ YES Sbjct: 123 YSGWYSVRQEAYFDESETTLGEDGVRREPLGSPVEWNEEESYFFRLSAYQDKLLALYESQ 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+F+ P ERRNEV+SFVKSGLKDLS+SR TF WG+ +P D +++MYVW+DALTNY+T G Sbjct: 183 PDFVGPAERRNEVMSFVKSGLKDLSISRTTFKWGVPVPGDDKHVMYVWVDALTNYITAAG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D + ++WPA H+IGKDI+RFHA+YWPAFL+SA + LPK+VF+HGF+ ++GEK+ Sbjct: 243 YPDT-KSDQWRYWPA-THIIGKDIVRFHAVYWPAFLMSAGIELPKRVFAHGFLFNRGEKM 300 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNV+DP +IE G+D +RYF +RE+ G+DG Y D + R NADLANG+GNL Sbjct: 301 SKSVGNVVDPFALIEHYGLDQVRYFFLREVPFGQDGSYSHDAIVNRTNADLANGLGNLAQ 360 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ G++P G T++D +IL L R+ M Q IH ALA + +V+E Sbjct: 361 RSLSMIAKNCGGVVPKRGEMTDADSAILDQAVAALTTARKAMAGQGIHLALAAIFDVVAE 420 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 DRYF Q PW LKKT+P+R TVL+ T E++R++A+L Q F+P A K+ D+L V + Sbjct: 421 ADRYFAGQAPWALKKTDPERMETVLWTTAELVRRVAVLCQPFIPGSAAKLLDLLAVPADK 480 Query: 484 RCFQSL--DQRLKPGFMLHKTFDPIFPRFL 511 R F + D L PG L + +FPR++ Sbjct: 481 RDFVHVHADYALVPGTALPAP-EGVFPRYV 509 >gi|188583889|ref|YP_001927334.1| methionyl-tRNA synthetase [Methylobacterium populi BJ001] gi|179347387|gb|ACB82799.1| methionyl-tRNA synthetase [Methylobacterium populi BJ001] Length = 522 Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust. Identities = 276/512 (53%), Positives = 364/512 (71%), Gaps = 5/512 (0%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K E I+TAI+YPN PHIGHAYE+I D +ARFHRLDG +VLFTTGTDEHG KI + Sbjct: 6 KANEPFLITTAISYPNGAPHIGHAYEVIATDAIARFHRLDGREVLFTTGTDEHGLKIQQT 65 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A AGVT + FVD + F+ +AD LD +YD FIRTTE H+ + LW+++ GDIY Sbjct: 66 AAKAGVTPRAFVDDMAGRFKAVADRLDCAYDRFIRTTEPDHYAAAQELWRRMEANGDIYL 125 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180 Y+GWYS+RDEAYY++ E DG +A+ + PV+WMEEE Y FRLS YQ+ LL Y Sbjct: 126 AKYAGWYSVRDEAYYDEAETVLAPDGSRRSAKTDTPVEWMEEENYLFRLSKYQEPLLKLY 185 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 P+F+ P R NEV SFV+SGLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT Sbjct: 186 AEQPDFLAPETRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVDALTNYLT 245 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TG+ D A+FWPA LH+IGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF L +G Sbjct: 246 VTGFPDA-GAPNARFWPASLHIIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG 304 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKSLGNV+DP++++ GVD +RYFL+RE G DG YD + + R+NADLAN +GN Sbjct: 305 EKMSKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGGDGNYDHEAIINRINADLANDLGN 364 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L RS+SMI K+ DG +P PG FTE+D +L+ + + ++ R MQN +H LA++ ++ Sbjct: 365 LAQRSLSMIAKNCDGAVPEPGDFTEADARLLAAAAALPEKARGLMQNLALHAILAEIWAV 424 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V E +RYF +++PW+L+K++P R +TVLYVTVE +R++ +++Q FVP + D+L V Sbjct: 425 VGEANRYFASEEPWKLRKSDPARMNTVLYVTVETLRRVGLMVQPFVPTAGAALLDLLAVP 484 Query: 481 DENR--CFQSLDQRLKPGFMLHKTFDPIFPRF 510 + R F D RL+ G L PIFPRF Sbjct: 485 VDRRSFAFAGEDHRLQGGTALPAP-APIFPRF 515 >gi|170747932|ref|YP_001754192.1| methionyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831] gi|170654454|gb|ACB23509.1| methionyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831] Length = 525 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 276/510 (54%), Positives = 358/510 (70%), Gaps = 5/510 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+ +STAI+YPN PHIGHAYE+I AD +ARFHRLDG DVLF+TGTDEHG KI +AA Sbjct: 10 RKTFALSTAISYPNGAPHIGHAYEVIAADAIARFHRLDGYDVLFSTGTDEHGLKIQQAAT 69 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T + FVD + F+ MAD +D +YD FIRTTE H+ + +W+++ GDIY Sbjct: 70 RAGTTPRAFVDGTAARFQAMADRMDCAYDRFIRTTEPDHYAAAQEIWRRMEANGDIYLDK 129 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y+GWYS+RDEAYY++ E DG + A PV+WMEEE + FRLSAYQDKLL Y+ Sbjct: 130 YAGWYSVRDEAYYDEAETRLLEDGSRRSLATDTPVEWMEEENFLFRLSAYQDKLLKLYDE 189 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P FI P RRNEV SFV+SGLKDLS+SR FDWG+ +P P ++MYVW+DALTNYLT T Sbjct: 190 QPGFIGPDTRRNEVASFVRSGLKDLSVSRTNFDWGVPVPGHPNHVMYVWVDALTNYLTVT 249 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 G+ D D K +FWP DLHVIGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF+L KGEK Sbjct: 250 GFPDASDPRK-EFWPMDLHVIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFLLSKGEK 308 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKSLGNV+DP E+ + GVD +RYF++RE+ G DG Y + + R+NADLAN +GNL Sbjct: 309 MSKSLGNVLDPFELADTYGVDPVRYFVLREVPFGGDGSYSHEAIIGRINADLANDLGNLA 368 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 RS+SM+ K+ DG +P PGA +D ++L+ + R M + +H LA++ ++V+ Sbjct: 369 QRSLSMVAKNCDGAVPDPGALDAADTALLAQADALPARARTLMGDLALHTVLAEIWAVVA 428 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 E +RYF AQ+PW+L+K++P R + VLY T+E +R IL Q FVP A K+ D+L V + Sbjct: 429 EANRYFAAQEPWKLRKSDPARMNAVLYTTLESLRVFGILTQPFVPGAAAKLLDLLAVPAD 488 Query: 483 NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 R + + RL PG L PIFPRF Sbjct: 489 RRGLADVGEGGRLVPGTALPAP-APIFPRF 517 >gi|319404210|emb|CBI77803.1| Methionyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498] Length = 513 Score = 568 bits (1464), Expect = e-160, Method: Compositional matrix adjust. Identities = 261/510 (51%), Positives = 367/510 (71%), Gaps = 4/510 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+ YI+T I YPN+ PHIGHAY I++D LARF + DG +V F +GTDEHG K+ + A+ Sbjct: 2 RDIYYITTPIFYPNSAPHIGHAYNAIVSDTLARFQKADGKNVFFLSGTDEHGLKMQQTAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 +T + D+NS F+ M VL+ S +DFIRTTE+RHH C+ LWKK+ KGDIY GC Sbjct: 62 MLNITPQQLADRNSAVFQKMLAVLNCSNNDFIRTTEERHHKACQELWKKMEAKGDIYLGC 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y+GWYS+R E+YY + + +G + +PV+W EEE YFFRLS Y+ LL +YE Sbjct: 122 YAGWYSVRQESYYEEKDTEVDQEGVRREKELGSPVEWNEEESYFFRLSRYEKALLQHYEK 181 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 +P+FI P ERRNE+ISFVKSGLKD+S+SR TFDWGI++P +P+++MYVW+DALTNYLT Sbjct: 182 YPDFIGPNERRNEIISFVKSGLKDISISRTTFDWGIRVPGNPKHVMYVWVDALTNYLTGI 241 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 + N K FWPAD+H+IGKDI RFHAIYWPAFL+SA + LPK++F+HGF+L++G K Sbjct: 242 DFF-NETSKKRNFWPADVHIIGKDITRFHAIYWPAFLMSAEIELPKRIFAHGFLLNRGAK 300 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNV+DP E+++ G+D +RYF +RE+ G+DG Y+ D R+NADLAN +GNL Sbjct: 301 MSKSIGNVVDPFEMVDCYGLDQVRYFFLREVPFGQDGSYNHDNFVNRINADLANDLGNLA 360 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 RS+SM+ K+ + +PTP AF DE +L +VL+ +R+ M NQ H AL+ + S+V+ Sbjct: 361 QRSLSMVEKNCNMKVPTPAAFLIQDEQLLKQSLQVLEVVRQTMSNQAPHLALSAIFSVVA 420 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + +RYF ++PW L+K NP+R TVLY+T+EV+R++ I+L F+P+ A K+ D L +A+E Sbjct: 421 DANRYFANEEPWSLRKNNPERFFTVLYITLEVLRRIGIMLLPFIPQSATKLLDSLAIAEE 480 Query: 483 NRCFQSL-DQRLKPGFMLHKTFDPIFPRFL 511 +R + D ++K +L PIFPR++ Sbjct: 481 DRLLHHISDLKIKEETVLPPPV-PIFPRYI 509 >gi|111022628|ref|YP_705600.1| methionyl-tRNA synthetase [Rhodococcus jostii RHA1] gi|110822158|gb|ABG97442.1| methionine--tRNA ligase [Rhodococcus jostii RHA1] Length = 519 Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust. Identities = 262/509 (51%), Positives = 352/509 (69%), Gaps = 2/509 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R Y++TAIAYPN PHIGHAYE I +D LARF RLDG DV F TGTDEHG K+ + A Sbjct: 10 RPPFYLTTAIAYPNGVPHIGHAYEYISSDALARFKRLDGFDVYFMTGTDEHGLKMQQTAA 69 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + +NS F M L+IS+D FIRTT+ H + + +W+++ D GDIY Sbjct: 70 KEGIDVRELAARNSDVFEAMDKTLNISFDRFIRTTDADHEEASKAIWRRMLDNGDIYLDT 129 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182 YSGWYS+RDEA+Y + E DG + + PV+W EE YFF+LS YQDKLL YE Sbjct: 130 YSGWYSVRDEAFYTEAETTLQDDGSRLSTETGTPVEWTEESTYFFKLSEYQDKLLRLYEE 189 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 +P+FI P RRNE++SFVK GLKDLS+SR TFDWG+ +PD P+++MYVW+DALTNYLT Sbjct: 190 NPDFIAPATRRNEIVSFVKGGLKDLSISRTTFDWGVPVPDHPEHVMYVWVDALTNYLTGA 249 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY D KFWPA+LH+IGKDI RFH +YWPAFL+SA + LPK+VF HGF+ +KGEK Sbjct: 250 GYPDTDSEQFGKFWPANLHIIGKDITRFHTVYWPAFLMSAGIELPKRVFVHGFLYNKGEK 309 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNV+DP+ ++E+ G+DA+R+FL+REI+ G+DG Y + + R+NADLAN +GNL Sbjct: 310 MSKSVGNVVDPVAMVEQYGLDAVRFFLLREISYGQDGSYSHEAIVTRINADLANELGNLA 369 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 RS+SM+ K+ D +PTPG TE D ++L+ +L +R Q +H AL + S++ Sbjct: 370 QRSLSMVAKNCDAQVPTPGELTEDDTAMLAQADALLGRVRAEYDVQALHLALEAIWSVLG 429 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 E +RYF Q+PW L+KT+P+R +TVLYVT+EV+R + IL+Q +P A KI D+L + Sbjct: 430 ETNRYFSKQEPWVLRKTDPERMATVLYVTLEVVRIVGILVQPVMPDAAEKILDLLGQKAD 489 Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F L R+ G L +FPR++ Sbjct: 490 ARQFSDLSTRIVAGTPLPAP-SGVFPRYV 517 >gi|49474218|ref|YP_032260.1| methionyl-tRNA synthetase [Bartonella quintana str. Toulouse] gi|49239722|emb|CAF26101.1| Methionyl-tRNA synthetase [Bartonella quintana str. Toulouse] Length = 519 Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust. Identities = 262/510 (51%), Positives = 363/510 (71%), Gaps = 4/510 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+ YI+T I YPN+ PHIGHAY I +D LARF RLDG +V F +GTDEHG K+ + A Sbjct: 2 RDTYYITTPIFYPNSTPHIGHAYSAIASDALARFQRLDGKNVFFLSGTDEHGLKMQQTAT 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K D+NS F+ M L+ S DDFIRTTE+RH+ C+ +WKK+ GDIY GC Sbjct: 62 ALGMTPKQLADRNSAVFKKMLAALNCSNDDFIRTTEERHYQACQEIWKKMQADGDIYLGC 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWYS+R EAYY + E G D + +PV+W EEE YFFRLS Y+ LL +YE Sbjct: 122 YKGWYSVRQEAYYEEKETEVGEDNIRREKELGSPVEWNEEESYFFRLSRYEKALLEHYEK 181 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 HP+FI P+ER NEVISFVKSGLKD+S+SR +F WGI +P +P+++MYVW+DALTNYL+ Sbjct: 182 HPDFIAPLERYNEVISFVKSGLKDISISRASFHWGICVPGNPKHVMYVWVDALTNYLSAI 241 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 G+ D + K FWPA++H+IGKDI+RFHA+YWPAFL+SA + LPK+VF+HGF+L++G K Sbjct: 242 GFFDG-NSKKRDFWPANIHIIGKDIIRFHAVYWPAFLMSAGIALPKRVFAHGFLLNRGAK 300 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNV+DP E+I+ G+D +RYFL+RE+ G+DG Y D + R+NADLAN +GNL Sbjct: 301 MSKSIGNVVDPFEMIDHYGLDQVRYFLLREVPFGQDGSYGHDNVVNRINADLANDLGNLA 360 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 RS+SMI K+ D +P P AF DE +L + L R+ M +Q +H AL+ + S+V+ Sbjct: 361 LRSLSMIAKNCDAKVPRPAAFLIQDEQLLKQSLQALDITRQAMSSQEMHLALSAIFSVVA 420 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + +RYF ++PW L+K NP+R STVLY+TVE++R++ I+L F+P+ A K+ D L +++ Sbjct: 421 DANRYFANEQPWNLRKNNPERFSTVLYITVEILRRIGIMLLPFMPQSAAKLLDSLAISEN 480 Query: 483 NRCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511 +R + +++ G L +PIFPR++ Sbjct: 481 DRLLYHISHSKIQEGLDLPPP-EPIFPRYI 509 >gi|229494943|ref|ZP_04388694.1| methionyl-tRNA synthetase [Rhodococcus erythropolis SK121] gi|229318167|gb|EEN84037.1| methionyl-tRNA synthetase [Rhodococcus erythropolis SK121] Length = 532 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 261/510 (51%), Positives = 358/510 (70%), Gaps = 2/510 (0%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ER YI+TAIAYPN PHIGHAYE I +D LARF RLDG +V F TGTDEHG K+ + A Sbjct: 22 ERSPFYITTAIAYPNGAPHIGHAYEYISSDALARFKRLDGHEVFFMTGTDEHGLKMQQTA 81 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + +NS F+++ VL+ISYD FIRTT+ H + +W+K++ GDIY Sbjct: 82 IKEGIDVRELAARNSDVFQNLDKVLNISYDRFIRTTDADHQVASKAIWEKMAASGDIYLD 141 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYE 181 YSGWYS+RDEA+Y + E DG + + PV+W EE Y FRLSAY+D+LL+ YE Sbjct: 142 TYSGWYSVRDEAFYTEAETTLLDDGTRQSTETGTPVEWTEESNYTFRLSAYEDRLLALYE 201 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEFI P RRNE++SFVK GLKDLS+SR TFDWG+++P DP ++MYVW+DALTNYLT Sbjct: 202 EHPEFIAPATRRNEIVSFVKGGLKDLSISRTTFDWGVEVPGDPDHVMYVWVDALTNYLTG 261 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY + KFWPA LH+IGKDI RFH +YWPAFL+SA + LP++VF HGF+ +KGE Sbjct: 262 VGYPNVDSAEFEKFWPASLHIIGKDITRFHTVYWPAFLMSAGIELPERVFVHGFLYNKGE 321 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS+GNV+DPI ++++ G+DA+R+FL+REI+ G+DG Y + + R+NADL+N +GNL Sbjct: 322 KMSKSVGNVVDPIAMVDQYGLDAVRFFLLREISYGQDGSYSHEAIVTRMNADLSNELGNL 381 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 RS++M+ K+ D +PTPG FTE D ++L+ +L + R Q +H AL + ++ Sbjct: 382 AQRSLTMVAKNCDAQVPTPGEFTEDDLAMLASADALLAKCRSEFDVQALHLALEAIWGVL 441 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 E +RYF Q+PW L+KT+P R +TVLYVT+EV+R + +L+Q +P A++I D+L ++ Sbjct: 442 GETNRYFSKQEPWVLRKTDPARMATVLYVTLEVVRIVGLLVQPVMPDAASRILDLLGQSE 501 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 ENR F + R+ L P+FPRF+ Sbjct: 502 ENRQFADIAVRIDANRKLPAP-APVFPRFV 530 >gi|319783483|ref|YP_004142959.1| methionyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169371|gb|ADV12909.1| methionyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 516 Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust. Identities = 267/510 (52%), Positives = 354/510 (69%), Gaps = 5/510 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+K YI+T I YPN +PHIGHAY +I D LARF RLDG DV F TGTDEHG K+ + A+ Sbjct: 3 RDKFYITTPIFYPNGKPHIGHAYTVIATDALARFQRLDGKDVFFLTGTDEHGLKMQQTAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T D+NS FR M + + S D +IRTTE RH+++C+ +WK ++ GDIY Sbjct: 63 KEGITPLALADRNSAIFRAMTEAMGGSNDQYIRTTEPRHYESCQAIWKAMAANGDIYLDR 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 YSGWYS+R EAY+++ E G DG +PV+W EEE YFFRLSAYQDKLL+ YES Sbjct: 123 YSGWYSVRQEAYFDESETTLGDDGVRREPLGSPVEWNEEESYFFRLSAYQDKLLALYESQ 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+F+ P ERRNEV+SFVKSGLKDLS+SR TF WG+ +P D +++MYVW+DALTNY+T G Sbjct: 183 PDFVGPTERRNEVLSFVKSGLKDLSISRTTFKWGVPVPGDDKHVMYVWVDALTNYITAAG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D + +WPA H+IGKDI+RFHA+YWPAFL+SA + LPK+VF+HGF+ ++GEK+ Sbjct: 243 YPDT-KAEQWHYWPA-THIIGKDIVRFHAVYWPAFLMSAGIELPKRVFAHGFLFNRGEKM 300 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNV+DP ++E G+D +RYF +RE+ G DG Y D + R NADLANG+GNL Sbjct: 301 SKSVGNVVDPFAMVEHYGLDQVRYFFLREVPFGNDGSYSHDAIVNRTNADLANGLGNLAQ 360 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SMI K+ G++P G T++D +IL + L R+ + Q IH ALA + +V+E Sbjct: 361 RSLSMIAKNCGGVVPQRGELTDADRAILDQAAAALDIARKAVAEQGIHLALAAIFGVVAE 420 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 DRYF + PW LKKTN R TVL+ T EV+R++A+L Q F P A K+ D+L V E+ Sbjct: 421 ADRYFAGEAPWALKKTNLARMETVLWTTAEVVRRVAVLCQPFTPGSAAKLLDLLAVPAES 480 Query: 484 RCFQSL--DQRLKPGFMLHKTFDPIFPRFL 511 R F + D L PG L + +FPR++ Sbjct: 481 RDFVHVHADHALVPGTAL-PVPEGVFPRYV 509 >gi|226365134|ref|YP_002782917.1| methionyl-tRNA synthetase [Rhodococcus opacus B4] gi|226243624|dbj|BAH53972.1| methionyl-tRNA synthetase [Rhodococcus opacus B4] Length = 519 Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust. Identities = 259/509 (50%), Positives = 354/509 (69%), Gaps = 2/509 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R Y++TAIAYPN PHIGHAYE I +D LARF RLDG DV F TGTDEHG K+ + A Sbjct: 10 RPPFYLTTAIAYPNGVPHIGHAYEYISSDALARFKRLDGFDVYFMTGTDEHGLKMQQTAA 69 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + +NS F M L+IS+D FIRTT+ H + + +W+++ + GDIY Sbjct: 70 KEGIDVRELAARNSDVFEAMDKTLNISFDRFIRTTDADHEEASKAIWQRMLEAGDIYLDT 129 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182 YSGWYS+RDEA+Y + E DG + + PV+W EE YFF+LS YQDKLL+ Y+ Sbjct: 130 YSGWYSVRDEAFYTEAETTLQEDGSRLSTETGTPVEWTEESTYFFKLSEYQDKLLALYDE 189 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 +P+FI P RRNE++SFVK GLKDLS+SR TFDWG+ +P P+++MYVW+DALTNYLT Sbjct: 190 NPDFIAPATRRNEIVSFVKGGLKDLSISRTTFDWGVPVPGHPEHVMYVWVDALTNYLTGA 249 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY D KFWPA+LH+IGKDI RFH +YWPAFL+SA + LPK+VF HGF+ +KGEK Sbjct: 250 GYPDTDSEQFGKFWPANLHIIGKDITRFHTVYWPAFLMSAGIELPKRVFVHGFLYNKGEK 309 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNV+DP+ ++E+ G+DA+R+FL+REI+ G+DG Y + + R+NADLAN +GNL Sbjct: 310 MSKSVGNVVDPVAMVEQYGLDAVRFFLLREISYGQDGSYSHEAIVTRINADLANELGNLA 369 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 RS+SM+ K+ D +PTPGA T+ D ++L+ +L+ +R Q +H AL + S++ Sbjct: 370 QRSLSMVAKNCDAQVPTPGALTDDDTAMLAQADALLERVRAEYDVQALHLALEAIWSVLG 429 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 E +RYF Q+PW L+KT+P+R +TVLYVT+EV+R + IL+Q +P A KI D+L + Sbjct: 430 ETNRYFSKQEPWVLRKTDPERMATVLYVTLEVVRIVGILVQPVMPDAAEKILDLLGQKSD 489 Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F L R+ G L +FPR++ Sbjct: 490 ARQFSDLPARIVAGTPLPAP-SGVFPRYV 517 >gi|54026880|ref|YP_121122.1| methionyl-tRNA synthetase [Nocardia farcinica IFM 10152] gi|54018388|dbj|BAD59758.1| putative methionyl-tRNA synthetase [Nocardia farcinica IFM 10152] Length = 518 Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust. Identities = 263/510 (51%), Positives = 355/510 (69%), Gaps = 8/510 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++TAIAYPN PHIGHAYE I AD +ARF RLDG DV F TGTDEHGQK+ +AA G Sbjct: 8 FYVTTAIAYPNGAPHIGHAYEYISADAIARFKRLDGYDVFFMTGTDEHGQKMQQAAAAEG 67 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + + +NS F + LD+SYD FIRTT+ H +W+++ GDIY Y+G Sbjct: 68 IPVQDLAARNSDVFERLDKALDVSYDRFIRTTDADHRAASVAIWERMLANGDIYLDNYAG 127 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 WYS+RDEA+Y ++E DG + + PV W EE +FFRLS YQD+LL++YE HPE Sbjct: 128 WYSVRDEAFYTEEETTLLEDGSRISTETKTPVTWTEESNFFFRLSKYQDRLLAHYEEHPE 187 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RRNE++S+VK+GLKDLS+SR TFDWG+ +P P ++MYVW+DALTNYLT G+ Sbjct: 188 FIAPATRRNEIVSYVKAGLKDLSISRTTFDWGVPVPGHPDHVMYVWVDALTNYLTGVGFP 247 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D + KFWPAD+H+IGKDI RFH +YWPAFL+SA +PLPK+VF HGF+ +KGEK+SK Sbjct: 248 DTDSPAFRKFWPADVHIIGKDITRFHTVYWPAFLMSAGVPLPKRVFVHGFLYNKGEKMSK 307 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S+GNV+DP+E+++E G+DA+R+FL+REI+ G+DG Y D + R+NADLAN GNLV RS Sbjct: 308 SVGNVVDPLELVDEYGLDAVRFFLLREISYGQDGSYSHDAIVARINADLANEFGNLVQRS 367 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 ++M+ K+ D +PTPG FT D ++L + +L+ R Q +H AL + + E + Sbjct: 368 LTMVHKNCDAAVPTPGEFTAEDRALLDRAAGLLERCRAEFDAQQMHLALEAIWLTLGETN 427 Query: 426 RYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 RYF AQ+PW L+K+ + R +TVLYVT+EV+R +AIL+Q +P A +I D+L A Sbjct: 428 RYFSAQQPWALRKSGTEADLARMATVLYVTLEVVRIVAILVQPVMPGSAGRILDLL--AQ 485 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 + R F L L PG L +P+FPR++ Sbjct: 486 QGRTFADLATPLTPGTPLPAP-EPVFPRYV 514 >gi|226307854|ref|YP_002767814.1| methionyl-tRNA synthetase [Rhodococcus erythropolis PR4] gi|226186971|dbj|BAH35075.1| methionyl-tRNA synthetase [Rhodococcus erythropolis PR4] Length = 532 Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust. Identities = 260/510 (50%), Positives = 357/510 (70%), Gaps = 2/510 (0%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ER YI+TAIAYPN PHIGHAYE I +D LARF RLDG +V F TGTDEHG K+ + A Sbjct: 22 ERSPFYITTAIAYPNGAPHIGHAYEYISSDALARFKRLDGHEVFFMTGTDEHGLKMQQTA 81 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + +NS F+++ VL+ISYD FIRTT+ H + +W+K++ GDIY Sbjct: 82 IKEGIDVRELAARNSDVFQNLDKVLNISYDRFIRTTDADHQVASKAIWEKMAASGDIYLD 141 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYE 181 YSGWYS+RDEA+Y + E DG + + PV+W EE Y FRLSAY ++LL+ YE Sbjct: 142 TYSGWYSVRDEAFYTESETTLLEDGTRQSTETGTPVEWTEESNYTFRLSAYGERLLALYE 201 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEFI P RRNE++SFVK GLKD+S+SR TFDWG+K+P DP ++MYVW+DALTNYLT Sbjct: 202 EHPEFIAPTTRRNEIVSFVKGGLKDISISRTTFDWGVKVPGDPDHVMYVWVDALTNYLTG 261 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY + KFWPA LH+IGKDI RFH +YWPAFL+SA + LP++VF HGF+ +KGE Sbjct: 262 VGYPNVDSEEFKKFWPASLHIIGKDITRFHTVYWPAFLMSAGIELPERVFVHGFLYNKGE 321 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS+GNV+DPI ++++ G+DA+R+FL+REI+ G+DG Y + + R+NADL+N +GNL Sbjct: 322 KMSKSVGNVVDPIAMVDQYGLDAVRFFLLREISYGQDGSYSHEAIVTRMNADLSNELGNL 381 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 RS++M+ K+ D +PTPG FTE D ++L+ +L + R Q +H AL + ++ Sbjct: 382 AQRSLTMVAKNCDAQVPTPGEFTEDDLAMLASADALLAKCRSEFDVQALHLALEAIWGVL 441 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 E +RYF Q+PW L+KT+P R +TVLYVT+EV+R + +L+Q +P A++I D+L ++ Sbjct: 442 GETNRYFSKQEPWVLRKTDPARMATVLYVTLEVVRIVGLLVQPVMPDAASRILDLLGQSE 501 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 ENR F + R+ L P+FPRF+ Sbjct: 502 ENRQFADIAVRIDANRKLPAP-APVFPRFV 530 >gi|49475612|ref|YP_033653.1| methionyl-tRNA synthetase [Bartonella henselae str. Houston-1] gi|49238419|emb|CAF27646.1| Methionyl-tRNA synthetase [Bartonella henselae str. Houston-1] Length = 519 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 260/506 (51%), Positives = 361/506 (71%), Gaps = 4/506 (0%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I YPN PHIGHAY I +DVLARF RLDG +V F +GTDEHG K+ + A G+ Sbjct: 6 YITTPIFYPNGAPHIGHAYSAIASDVLARFQRLDGKNVFFLSGTDEHGLKMQQTAVALGI 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K D+NS F+ M L+ S +DFIRTTEKRH+ C+ +WKK+ GDIY Y+GW Sbjct: 66 TPKQLTDRNSAVFQKMLAALNCSNNDFIRTTEKRHYQACQEIWKKMKANGDIYLSRYTGW 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 YS+R EAYY + + G D + +PV+W EEE YFF+LS Y+ LL +YE HP+F Sbjct: 126 YSVRQEAYYEEKDTEVGEDNIRREKELGSPVEWNEEESYFFKLSRYEKALLEHYEKHPDF 185 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P ERRNEVISF+KSGLKD+S+SR +F+WGI +P+D +++MYVW+DALTNYL+ G+ D Sbjct: 186 IAPPERRNEVISFIKSGLKDISISRASFNWGICVPNDSKHVMYVWVDALTNYLSAIGFFD 245 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 + K FWPA +H+IGKDI+RFHAIYWPAFL+SA + LPK++F+HGF+L+ G K+SKS Sbjct: 246 E-NSKKRAFWPASVHIIGKDIIRFHAIYWPAFLMSAGIALPKRIFAHGFLLNNGVKMSKS 304 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 +GNV+DP E+I+ G+D +RYFL+RE+ G+DG Y D R+NADLAN +GNL RS+ Sbjct: 305 IGNVVDPFEMIDHYGLDQVRYFLLREVPFGQDGSYSHDSFVNRINADLANDLGNLAQRSL 364 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 SMI K+ D +P P AF DE +L + L +R+ M +Q IH AL+ + S+V++ +R Sbjct: 365 SMIAKNCDAKVPLPAAFLVQDEQLLEKSLQTLDTMRKAMSSQEIHLALSAIFSVVADANR 424 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 YF ++PW L+K NP+R STVLY+T+E++R++ I+L F+P+ A K+ D L ++ E+R Sbjct: 425 YFANEQPWSLRKNNPERFSTVLYITLEILRRIGIMLLPFMPQSAAKLLDSLKISQEDRLL 484 Query: 487 QSL-DQRLKPGFMLHKTFDPIFPRFL 511 Q + + +++ G L +PIFPR++ Sbjct: 485 QHISNSKIQEGLDLPPP-EPIFPRYI 509 >gi|304391677|ref|ZP_07373619.1| methionyl-tRNA synthetase [Ahrensia sp. R2A130] gi|303295906|gb|EFL90264.1| methionyl-tRNA synthetase [Ahrensia sp. R2A130] Length = 513 Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust. Identities = 263/509 (51%), Positives = 356/509 (69%), Gaps = 4/509 (0%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+TAI+YPN PHIGHAYE I AD +ARF RLDG DV F GTD HGQK+ + A++ Sbjct: 3 QKYYITTAISYPNGAPHIGHAYEFICADAIARFKRLDGYDVRFQIGTDVHGQKMFQTARD 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T K D+NS F+ M + IS+D FIRT+++ HH + +W + GDIYK Y Sbjct: 63 LGITPKELADKNSDAFQSMTEHYGISWDRFIRTSDEDHHRASQAIWSAMEANGDIYKDAY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 +GWYS+RDEAYY +DE DG+ Q +PV+W+EEE YFFRLSAY DKLL+ ++ P Sbjct: 123 AGWYSVRDEAYYEEDETRLTEDGKRLGPQGSPVEWVEEESYFFRLSAYGDKLLALFDEQP 182 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P R+NE++SFVK GL+DLS+SR TFDWG+K+P D +++MYVW+DALTNYLT GY Sbjct: 183 DFIAPASRKNEIVSFVKGGLRDLSISRTTFDWGVKVPGDDKHVMYVWVDALTNYLTGAGY 242 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D + +WPADLHVIGKDI RFHA+YWPAFL+SA + LPK+V+ HGF+L GEK+S Sbjct: 243 PDT-ESELWSYWPADLHVIGKDITRFHAVYWPAFLMSAGIDLPKRVYGHGFLLANGEKMS 301 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSLGNV DP+++ E G+DA+RY+ R + G DG Y D + NADLAN GNL R Sbjct: 302 KSLGNVADPMDLAAEYGIDAMRYYCQRLVRFGSDGSYSHDDIVNHTNADLANNFGNLAQR 361 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 S+SMI K+ DG + GAFTE+D ++L+ +L R+ + + + AL + + + Sbjct: 362 SLSMIFKNCDGKLDGAGAFTEADTALLATADGMLAPCRDAIDRTVPNEALDAIWATLDAA 421 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 +RYFD Q PW LKKT+P+R +TVLYVT EV+RQ++IL+QAF+P+ A K+ D L + ++ R Sbjct: 422 NRYFDEQAPWGLKKTDPERMATVLYVTAEVVRQVSILVQAFLPESAEKLLDQLKIPEDQR 481 Query: 485 CFQSL--DQRLKPGFMLHKTFDPIFPRFL 511 F L D RL ++ K + +FPR++ Sbjct: 482 DFAYLGGDNRLDTATVIEKP-EGVFPRYV 509 >gi|163868324|ref|YP_001609533.1| methionyl-tRNA synthetase [Bartonella tribocorum CIP 105476] gi|161017980|emb|CAK01538.1| Methionyl-tRNA synthetase [Bartonella tribocorum CIP 105476] Length = 519 Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust. Identities = 255/510 (50%), Positives = 365/510 (71%), Gaps = 4/510 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+ YI+T I YPN PHIGHAY I +DVLARF RL+G V F +GTDEHG K+ + A Sbjct: 2 RDTYYITTPIFYPNGHPHIGHAYSAIASDVLARFQRLNGKKVFFLSGTDEHGLKMQQTAA 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 +T + D+NS F+ M VL+ S DDFIRTTE+RH+ C+ +WKK+ + GDIY G Sbjct: 62 ALDMTPQQLADRNSAVFQKMLAVLNCSNDDFIRTTEERHYQACQEIWKKMEENGDIYLGR 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y+GWYS+R EAYY + + G D + +PV+W EEE YFFRLS Y+ LL YYE Sbjct: 122 YTGWYSVRQEAYYEEKDTEVGPDNIRREKELGSPVEWNEEESYFFRLSRYEKALLEYYEK 181 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 HP+FI P+ERRNE+ISF+KSGLKD+S+SR +F+WG+ +P++P+++MYVW+DALTNYL+ Sbjct: 182 HPDFIAPLERRNEIISFIKSGLKDISISRASFNWGVAVPENPKHVMYVWVDALTNYLSAI 241 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 + N + K FWPA+ H+IGKDI+RFHA+YWPAFL+SA + LPK +F+HGF+L++G K Sbjct: 242 DFF-NKNSKKRNFWPANTHIIGKDIIRFHAVYWPAFLMSAGIELPKNIFAHGFLLNRGAK 300 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNV+DP E+I+ G+D +RYFL+RE+ G+DG Y+ + L R+NADLAN +GNL Sbjct: 301 MSKSVGNVVDPFEMIDHYGLDQVRYFLLREVPFGQDGSYNHESLVNRINADLANDLGNLA 360 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 RS+SMI K+ D +P P AF D+ +L +VL+ + + M +H AL+ + S V+ Sbjct: 361 QRSLSMIAKNCDAKVPKPAAFLVQDKQLLEQSLQVLETVHQAMSFHSMHLALSAIFSTVA 420 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + +RYF ++PW L+K++P+R STVLY+TVE++R++ I+L F+P+ A K+ D L VA++ Sbjct: 421 DANRYFANEQPWSLRKSDPERFSTVLYITVEILRRIGIMLLPFIPQSAAKLLDSLAVAED 480 Query: 483 NRCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511 +R + +++ G L +PIFPR++ Sbjct: 481 DRLLYHIAHAKIQEGLDLPPP-EPIFPRYI 509 >gi|296140917|ref|YP_003648160.1| methionyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162] gi|296029051|gb|ADG79821.1| methionyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162] Length = 516 Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust. Identities = 251/512 (49%), Positives = 360/512 (70%), Gaps = 2/512 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + Y++TAIAYPN PHIGHAYE I D +ARF RLDG DV F TGTDEHG K+ + Sbjct: 1 MAADKAFYVTTAIAYPNGVPHIGHAYEYIATDTIARFKRLDGFDVFFLTGTDEHGLKMQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA G+ TK D+N+ F + + ++D FIRTT+ H+ + +W+K++ +GDIY Sbjct: 61 AAAKEGIETKALADRNAAAFEALQRAVGSTFDRFIRTTDTDHYAASQAIWEKLAARGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 ++GWYS+RDEAYY +DE DG + PV+W EE YFFRLSAYQDKLL Sbjct: 121 LDTFAGWYSVRDEAYYAEDETALLEDGTRAAISTGTPVEWTEEASYFFRLSAYQDKLLEL 180 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 +E++P ++ P RRNE++SF+K GLKDLS+SR TFDWG+ +P DP ++MYVW+DALTNYL Sbjct: 181 FETNPGYLEPATRRNEIVSFIKGGLKDLSISRTTFDWGVPVPGDPDHVMYVWVDALTNYL 240 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T +GY D A++WP L +IGKDI+RFHA+YWPAFL+SA + LP++VF+HGF+ +K Sbjct: 241 TGSGYPDTSSEQFARYWPPRLQMIGKDIIRFHAVYWPAFLMSAGIELPERVFAHGFLFNK 300 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 GEK+SKS+GNV+DP ++I G+DA+R+FL+RE++ G+DG Y + + R+NADLAN +G Sbjct: 301 GEKMSKSVGNVVDPYQLIAAYGLDAVRFFLLREVSFGQDGSYSHEAIVGRINADLANELG 360 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL RS+SMI K+ G +P PG FT D ++L+ +L +R ++ Q +H L + + Sbjct: 361 NLAQRSLSMINKNCAGTVPAPGEFTADDTALLAKADDLLATVRRHVDQQALHLYLESIWA 420 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 ++++ +RYF AQ+PW+LK ++P R +TVLYVT EV+RQ+A+LLQ +P+ ++ +L Sbjct: 421 VLADTNRYFSAQEPWKLKASDPARMATVLYVTAEVVRQVALLLQPVMPESTEELLTLLEQ 480 Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 + R F+++ RL+PG L K +FPR++ Sbjct: 481 PRDERTFEAVATRLRPGTALPKP-QGVFPRYV 511 >gi|169628221|ref|YP_001701870.1| methionyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977] gi|169240188|emb|CAM61216.1| Methionyl-tRNA synthetase (MetG) [Mycobacterium abscessus] Length = 523 Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust. Identities = 259/515 (50%), Positives = 357/515 (69%), Gaps = 10/515 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+TAIAYPN +PHIGHAYE + D +ARF RLDG DV + TGTDEHG K+A+ A Sbjct: 6 DPFYITTAIAYPNGEPHIGHAYEYVATDAVARFKRLDGFDVRYLTGTDEHGLKVAQTAAA 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG+ T NS F + L+IS+D FIRTT+ H++ + +W+K++D GDIY Y Sbjct: 66 AGIPTAQLARHNSDVFEALQRTLNISFDRFIRTTDPDHYEASKAIWRKMADNGDIYLDTY 125 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESH 183 SGWYS+RDEAYY D E DG PV W EE YFFRLSAYQDKLL++YE+H Sbjct: 126 SGWYSVRDEAYYTDAETTVAPDGTRTATATGTPVDWTEEHSYFFRLSAYQDKLLAHYEAH 185 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 PEFI P RRNEV+SFV GL+DLS+SR TFDWG+ +PD+P+++MYVW+DALTNYLT G Sbjct: 186 PEFIGPDVRRNEVVSFVSGGLRDLSISRTTFDWGVPVPDNPEHVMYVWVDALTNYLTGVG 245 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D ++WPA++H+IGKDI+RFH +YWPAFL+SA + LP++VF+HGF+ +KGEK+ Sbjct: 246 YPDTDSELFGRYWPANIHMIGKDIIRFHTVYWPAFLMSAGIALPQRVFAHGFLTNKGEKM 305 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNV+DPI ++ G+D +RYFL+RE+ G+DG Y ++GL R+NADLAN +GNL Sbjct: 306 SKSIGNVVDPINLVNTFGLDQVRYFLLREVPFGQDGSYTEEGLIGRINADLANELGNLAQ 365 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SM+ K+ G++P PG F D +L+ +L++ R + + +H AL + ++ Sbjct: 366 RSLSMVAKNLGGIVPEPGEFAPEDTELLAAADTLLEQARTHFEVPAMHLALEAIWQVLGA 425 Query: 424 VDRYFDAQKPWELKKT--------NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 +RYF AQ+PW L K+ + +R TVLY T+EV+R +A+L+Q +P+ A K+ D Sbjct: 426 SNRYFSAQEPWVLAKSFQTDGSAADQERFGTVLYTTLEVVRIVALLVQPVMPESAAKLLD 485 Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 +L AD+ R F ++ RLKPG L +FP++ Sbjct: 486 LLGQADDQRDFAAIGTRLKPGVSLPAPTG-VFPKY 519 >gi|240850631|ref|YP_002972031.1| methionyl-tRNA synthetase [Bartonella grahamii as4aup] gi|240267754|gb|ACS51342.1| methionyl-tRNA synthetase [Bartonella grahamii as4aup] Length = 519 Score = 558 bits (1438), Expect = e-157, Method: Compositional matrix adjust. Identities = 253/510 (49%), Positives = 365/510 (71%), Gaps = 4/510 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+ YI+T I YPN PHIGHAY I +DVLARF RL+G +V F +GTDEHG K+ + A Sbjct: 2 RDTYYITTPIFYPNGAPHIGHAYSAIASDVLARFQRLNGKNVFFLSGTDEHGLKMQQTAA 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+NS F+ M VL+ S DDFIRTTE+RH+ C+ +WKK+ GDIY G Sbjct: 62 ALGMTPQQLADRNSAVFQKMLAVLNCSNDDFIRTTEERHYQACQEIWKKMEANGDIYLGR 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y+GWYS+R EAYY + + G D + +PV+W EEE YFFRLS Y+ LL YYE Sbjct: 122 YTGWYSVRQEAYYEEKDTEIGPDNIRREKELGSPVEWNEEESYFFRLSHYEKALLEYYEK 181 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 HP+FI P+ERRNE+ISF+KSGLKD+S+SR +F+WGI +P++P+++MYVW+DALTNYL+ Sbjct: 182 HPDFIAPLERRNEIISFIKSGLKDISISRASFNWGIAVPENPKHVMYVWVDALTNYLSAI 241 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 G+ N + K FWPA+ H+IGKDI+RFHA+YWPAFL+SA + LPK +F+HGF+L++G K Sbjct: 242 GFF-NENSKKRDFWPANTHIIGKDIIRFHAVYWPAFLMSAGIELPKNIFAHGFLLNRGAK 300 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNV+DP E+++ G+D +RYFL+RE+ G+DG Y + L R+NADLAN +GNL Sbjct: 301 MSKSIGNVVDPFEMVDHYGLDQVRYFLLREVPFGQDGSYSHESLVNRINADLANDLGNLA 360 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R +SMI K+ + +P P +F D+ +L +VL+ + + M + +H AL+ + S+V+ Sbjct: 361 QRCLSMIAKNCNAQVPRPTSFLAQDKQLLEQSLQVLETVHQAMSSYSMHLALSAIFSIVA 420 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + +RYF ++PW L+K + +R STVLY+TVE++R++ I+L F+P+ A K+ D L VA++ Sbjct: 421 DANRYFANEQPWSLRKNDQERFSTVLYITVEILRRIGIMLLPFIPQSAAKLLDSLAVAED 480 Query: 483 NRCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511 +R + +++ G L +PIFPR++ Sbjct: 481 DRLLYHISHSKIQEGLDLPPP-EPIFPRYI 509 >gi|319898928|ref|YP_004159021.1| Methionyl-tRNA synthetase [Bartonella clarridgeiae 73] gi|319402892|emb|CBI76443.1| Methionyl-tRNA synthetase [Bartonella clarridgeiae 73] Length = 513 Score = 558 bits (1437), Expect = e-157, Method: Compositional matrix adjust. Identities = 261/510 (51%), Positives = 354/510 (69%), Gaps = 4/510 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+ YI+T I YPN PHIGHAY I++D LARF R DG DV F +GTDEHG K+ + AQ Sbjct: 2 RDIYYITTPIFYPNGTPHIGHAYNAIVSDALARFQRADGKDVFFLSGTDEHGLKMQQTAQ 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 +T + D+NS F+ M ++L+ S +DFIRTTEKRHH + LWKK+ KGDIY G Sbjct: 62 MLNITPQQLADRNSAVFQKMLEILNCSNNDFIRTTEKRHHQASQELWKKMEAKGDIYLGR 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y+GWYS+ EAYY + + G + N PV+W EEE YFFRLS Y+ LL +YE Sbjct: 122 YTGWYSVSQEAYYEEKDTEIDEKGIRREKELNSPVEWNEEESYFFRLSRYEKALLQHYEK 181 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 +P+ I P ERRNE+ISF+KSGLKDLS+SR TFDWG+++P +P+++MYVW+DALTNYLT Sbjct: 182 YPDSIGPNERRNEIISFIKSGLKDLSISRTTFDWGVRVPGNPKHVMYVWVDALTNYLTAI 241 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 + D K FWPAD+H+IGKDI+RFH +YWPAFL+S + LPK++F+HGF+L++G K Sbjct: 242 DFFDE-TSQKRNFWPADIHIIGKDIIRFHTVYWPAFLMSVGIELPKRIFAHGFLLNRGVK 300 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNV+DP E+++ G+D +RYF +RE+ G DG YD D R+NADLAN +GNL Sbjct: 301 MSKSIGNVVDPFEMVDRYGLDQVRYFFLREVPFGHDGNYDHDSFVNRINADLANDLGNLA 360 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 RS+SMI K+ + IPTP AF DE +L + L+ R+ M Q H AL+ + S+V+ Sbjct: 361 QRSLSMIQKNCNAKIPTPAAFLIQDEQLLKQSLQALEIARQTMSRQAPHLALSAIFSVVA 420 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 E +RYF ++PW L K NP+R TVLY+T+E++R++ I+L F+P+ A K+ D L VA E Sbjct: 421 EANRYFANEEPWRLHKNNPERFFTVLYITLEILRRIGIMLLPFIPQSATKLLDSLVVAKE 480 Query: 483 NRCFQSL-DQRLKPGFMLHKTFDPIFPRFL 511 NR + D ++K L PIFPR++ Sbjct: 481 NRFLHHISDLKIKEDTELPSPV-PIFPRYI 509 >gi|311113865|ref|YP_003985087.1| methionine--tRNA ligase [Rothia dentocariosa ATCC 17931] gi|310945359|gb|ADP41653.1| methionine--tRNA ligase [Rothia dentocariosa ATCC 17931] Length = 515 Score = 558 bits (1437), Expect = e-157, Method: Compositional matrix adjust. Identities = 269/508 (52%), Positives = 360/508 (70%), Gaps = 8/508 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+TAI+YPN PHIGHAYE I ADVLARF RLDG DV F TGTDEHGQK+ A+ G Sbjct: 6 FYITTAISYPNGNPHIGHAYETIAADVLARFKRLDGFDVRFMTGTDEHGQKMQTTAEKQG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T K D+NS F+ M D L ISYD FIRTT+ H++ + +WK++ + GDIY Y+G Sbjct: 66 KTAKELADENSARFKAMNDALGISYDRFIRTTDPDHYEASQAIWKRMEENGDIYLDKYAG 125 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 WYS+RDEAYY +DE + DGQ Y + V+W EEE YFFRLS Y DKLL Y++ Sbjct: 126 WYSVRDEAYYAEDETEE-RDGQRYAISTGTEVEWTEEESYFFRLSKYADKLLELYKNEG- 183 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 ++ P RRNE+ISFVK GL DLS+SR TFDWG+ +P + +++MYVW+DALTNYLT GY Sbjct: 184 YVFPESRRNELISFVKGGLNDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLTGLGY- 242 Query: 246 DNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 N DG K+WPADLH+IGKDI RFH+IYWPAFL SA L LPK+VF HGF+L GEK+S Sbjct: 243 PNTDGELFTKYWPADLHLIGKDITRFHSIYWPAFLWSAGLELPKRVFGHGFLLVNGEKMS 302 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS+GNV+DP +++ G+D +R+FL+RE++ G+DG Y ++ + R+N+DLAN +GNL R Sbjct: 303 KSVGNVVDPADLVAAFGLDQVRFFLMREVSFGQDGSYSEESIINRINSDLANNLGNLAQR 362 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 S+SM+ K+ DG +PTPG FTE+D IL+ S + + +R + Q HRAL ++ +++++ Sbjct: 363 SLSMVAKNCDGRVPTPGEFTEADRKILAGASALYEPVRADYDEQAFHRALERIWTVLADT 422 Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-E 482 + YF Q+PW L+K +R +TVLYVT+EV+RQ+AIL+Q +P K+ D+L VA+ E Sbjct: 423 NAYFAEQEPWTLRKNGEFERMNTVLYVTLEVVRQVAILMQPVMPGSMEKLLDLLGVAEGE 482 Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 R F +L + L G L P+FPR+ Sbjct: 483 ERLFAALPKNLTAGKELPAP-TPVFPRY 509 >gi|120405753|ref|YP_955582.1| methionyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1] gi|119958571|gb|ABM15576.1| methionyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1] Length = 511 Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust. Identities = 255/507 (50%), Positives = 348/507 (68%), Gaps = 2/507 (0%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E YI+TAIAYPN PH+GHAYE I D +ARF RLDG DV F TGTD HG K+A+ A Sbjct: 3 EPYYITTAIAYPNGDPHVGHAYEYIATDAVARFKRLDGFDVRFLTGTDVHGLKMAETAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV T NS F+ + + L IS+D FIRT++ H++ + +W+++ D GD+Y G Y Sbjct: 63 LGVPTAELARSNSDVFQRLQEKLHISFDRFIRTSDPDHYEASKAIWRRMVDAGDVYLGKY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 SGWYS+RDE ++ + E A G + PV W EEE YFFRLSAY D+LL+ Y H Sbjct: 123 SGWYSVRDERFFTEAETSVDAAGVRIATETGTPVTWTEEETYFFRLSAYADRLLALYADH 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 PEFI P RRNEV+SFV GL+DLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT G Sbjct: 183 PEFIEPEVRRNEVVSFVSGGLRDLSISRTTFDWGVPVPDHPDHVMYVWVDALTNYLTGVG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 + D ++WPADLH++GKDI+RFH +YWPAFL+SA + LPKKVF HGF+L++GEK+ Sbjct: 243 FPDTDSELFTRYWPADLHMVGKDIIRFHTVYWPAFLMSAGIELPKKVFVHGFLLNRGEKM 302 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNV+DP+ +++ G+D +RYF +RE+ G+DG Y +D + R+NADLAN GNL Sbjct: 303 SKSVGNVVDPVNLVDTFGLDQVRYFFLREVPFGQDGSYSEDAIIGRINADLANEFGNLAQ 362 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SM+ K+ DG++P PGAFT D +L+ +L+ +R + + +H AL + S++ Sbjct: 363 RSLSMVAKNLDGVVPQPGAFTAEDSEMLAAADALLERVRRHFEATAMHLALEAIWSVLGA 422 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF AQ+PW L+KT+P R +TVLY T+EV+R A+L Q +P A K+ D+L + Sbjct: 423 ANRYFSAQEPWVLRKTDPARFATVLYTTLEVVRIAALLSQPVMPDAAAKLLDLLGQPADR 482 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510 R F ++ RL PG L +FPR+ Sbjct: 483 RAFTAIGTRLAPGTALPSPTG-VFPRY 508 >gi|300741759|ref|ZP_07071780.1| methionine--tRNA ligase [Rothia dentocariosa M567] gi|300380944|gb|EFJ77506.1| methionine--tRNA ligase [Rothia dentocariosa M567] Length = 515 Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust. Identities = 268/508 (52%), Positives = 359/508 (70%), Gaps = 8/508 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+TAI+YPN PHIGHAYE I ADVLARF RLDG DV F TGTDEHGQK+ A+ G Sbjct: 6 FYITTAISYPNGNPHIGHAYETIAADVLARFKRLDGFDVRFMTGTDEHGQKMQTTAEKQG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T K D+NS F+ M D L ISYD FIRTT+ H++ + +WK++ + GDIY Y+G Sbjct: 66 KTAKELADENSARFKAMNDALGISYDRFIRTTDPDHYEASQAIWKRMEENGDIYLDKYAG 125 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 WYS+RDEAYY +DE + DGQ Y + V+W EEE YFFRLS Y DKLL Y++ Sbjct: 126 WYSVRDEAYYAEDETEE-RDGQRYAISTGTEVEWTEEESYFFRLSKYADKLLDLYKNEG- 183 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 ++ P RRNE+ISFVK GL DLS+SR TFDWG+ +P + +++MYVW+DALTNYLT GY Sbjct: 184 YVFPESRRNELISFVKGGLNDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLTGLGY- 242 Query: 246 DNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 N DG K+WPADLH+IGKDI RFH+IYWPAFL SA L LPK+VF HGF+L GEK+S Sbjct: 243 PNTDGELFTKYWPADLHLIGKDITRFHSIYWPAFLWSAGLELPKRVFGHGFLLVNGEKMS 302 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS+GNV+DP +++ G+D +R+FL+RE++ G+DG Y ++ + R+N+DLAN +GNL R Sbjct: 303 KSVGNVVDPADLVAAFGLDQVRFFLMREVSFGQDGSYSEESIINRINSDLANNLGNLAQR 362 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 S+SM+ K+ DG +P PG FTE+D IL+ S + + +R + Q HRAL ++ +++++ Sbjct: 363 SLSMVAKNCDGRVPVPGEFTEADRKILAGASALYEPVRADYNEQAFHRALERIWTVLADT 422 Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-E 482 + YF Q+PW L+K +R +TVLYVT+EV+RQ+AIL+Q +P K+ D+L VA+ E Sbjct: 423 NAYFAEQEPWTLRKNGEFERMNTVLYVTLEVVRQVAILMQPVMPNSMEKLLDLLGVAEGE 482 Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 R F +L + L G L P+FPR+ Sbjct: 483 GRLFAALPKNLTAGKELPAP-TPVFPRY 509 >gi|220926667|ref|YP_002501969.1| methionyl-tRNA synthetase [Methylobacterium nodulans ORS 2060] gi|219951274|gb|ACL61666.1| methionyl-tRNA synthetase [Methylobacterium nodulans ORS 2060] Length = 515 Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust. Identities = 269/510 (52%), Positives = 361/510 (70%), Gaps = 5/510 (0%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E+ I+TAI+YPN PHIGHAYE+I D +ARF R+DG DV FTTGTDEHG KI + A Sbjct: 4 ERFTITTAISYPNGAPHIGHAYEVIATDAIARFKRIDGYDVFFTTGTDEHGLKIQQTAAK 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AGVT + FVD + FR MA+ L+ S+D FIRTT+ H + LW+++ + GDIY Y Sbjct: 64 AGVTPRAFVDAMAPRFRAMAEALNCSFDRFIRTTDPDHVAASQALWRRMEEAGDIYLSKY 123 Query: 125 SGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 SGWYS+RDEAYY++ E+ G DG + PV+W+EEE YFFRLSAY D+LL++Y + Sbjct: 124 SGWYSVRDEAYYDESELVLGPDGVRCAERTGTPVEWVEEESYFFRLSAYADRLLAHYAEN 183 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNEV+SFV+SGL+DLS+SR TFDWG+ +P P ++MYVW+DALTNY+T+ G Sbjct: 184 PDFIGPETRRNEVVSFVRSGLQDLSVSRTTFDWGVPVPGAPGHVMYVWVDALTNYITSCG 243 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 + D D + + WPADLHVIGKDI+RFHA+YWPAFL+SA + LPK+VF HGF+L +GEK+ Sbjct: 244 FPDEGD-PRWRHWPADLHVIGKDIIRFHAVYWPAFLMSAGVALPKRVFGHGFLLSRGEKM 302 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNV+DP+E+ GVD LRYF++RE+ G+DG Y + + R NADLAN +GNL Sbjct: 303 SKSLGNVVDPVELAGLYGVDPLRYFVLREVPFGQDGNYSHEAIVNRTNADLANDLGNLAQ 362 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS++MI ++ G +P PGA E+D ++L+ + R M + +H ALA++ ++V+E Sbjct: 363 RSLTMIARNCGGAVPEPGALIEADRALLAAADALPAAARAAMTDYALHHALAEIWAVVAE 422 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +RYF Q+PW L+KT+P R TVLYVT E +R + IL+Q FVP A K+ D+L + Sbjct: 423 ANRYFAGQEPWTLRKTDPARMGTVLYVTAETLRAIGILVQPFVPAAAAKLLDLLATPKQA 482 Query: 484 RCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 R + + RL PG L PIFPRF+ Sbjct: 483 RGLAQVGEGNRLVPGTALPAP-SPIFPRFV 511 >gi|182678510|ref|YP_001832656.1| methionyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] gi|182634393|gb|ACB95167.1| methionyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] Length = 530 Score = 555 bits (1430), Expect = e-156, Method: Compositional matrix adjust. Identities = 255/511 (49%), Positives = 359/511 (70%), Gaps = 4/511 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M R + Y++TAI Y N PHIGHAYE + D + RF RLDG DVLF TG DEHGQK+ + Sbjct: 15 MAGRPRFYLTTAIPYANGAPHIGHAYERLACDAITRFKRLDGYDVLFVTGMDEHGQKMQQ 74 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A +T + D+ + F M LD DD +RTTE RHH + +W +++ GDIY Sbjct: 75 TAARDHITPQELADRTAAQFAAMGLALDAPTDDVVRTTEPRHHVAAQEIWNRMAANGDIY 134 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 Y GWYS+RDEA++++ E+ +G +G PV+W+EEE Y+F+LSAYQ++LL++Y Sbjct: 135 LSKYPGWYSVRDEAFFDEGELTEGPNGTKLAPTGAPVEWVEEESYYFKLSAYQERLLAHY 194 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 ++HP+FI P + RNE++SFV+ GL DLS+SR TFDWGI +P D +++MYVW+DALTNY+T Sbjct: 195 QAHPDFITPEKYRNEIVSFVERGLTDLSISRSTFDWGIPVPGDAKHVMYVWVDALTNYIT 254 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TG+ D + +A FWPAD HVIGKDI RFHAIYWPAFL+SA + LPK++ HGF+ ++G Sbjct: 255 ATGFPDA-EAPRAVFWPADAHVIGKDITRFHAIYWPAFLMSAGIALPKQIVVHGFLFNRG 313 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKS+GNVIDP+ +IE G+D RYF +RE+ G+DG Y + + R NADLAN +GN Sbjct: 314 EKMSKSVGNVIDPLTLIETYGLDPFRYFFLREVPFGQDGNYSHEAIVNRTNADLANDLGN 373 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L RS+SM+ K+ G +P PGAF+E+D++IL + ++++ R+ MQ+ +H L ++ + Sbjct: 374 LAQRSLSMLAKNCGGKVPQPGAFSEADKAILDLSRALVEKSRDLMQDFSLHLILGEIWRV 433 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V E +RYF ++PW +KT+P R T+LYVT EV+R++AIL Q F+P+ A+K+ D L VA Sbjct: 434 VGEANRYFAGEEPWIKRKTDPARMETILYVTAEVLRRVAILTQPFIPQSASKLLDSLGVA 493 Query: 481 DENRCFQSLDQR--LKPGFMLHKTFDPIFPR 509 E R F +++ L PG +L T PIFPR Sbjct: 494 AEARLFIHVEEGPDLPPGTVL-PTPVPIFPR 523 >gi|145222520|ref|YP_001133198.1| methionyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK] gi|315442968|ref|YP_004075847.1| methionyl-tRNA synthetase [Mycobacterium sp. Spyr1] gi|145215006|gb|ABP44410.1| methionyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK] gi|315261271|gb|ADT98012.1| methionyl-tRNA synthetase [Mycobacterium sp. Spyr1] Length = 514 Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust. Identities = 253/504 (50%), Positives = 348/504 (69%), Gaps = 2/504 (0%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++TAIAYPN PH+GHAYE I D +ARF RLDG DV F TGTD HG K+A+ A GV Sbjct: 6 YVTTAIAYPNGDPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDVHGLKMAETAARLGV 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T NS F+ + + L++S+D FIRT++ H++ + +W ++ D GD+Y YSGW Sbjct: 66 PTAELARSNSDVFQRLQEKLNVSFDRFIRTSDADHYEASKAIWTRMVDAGDVYLDKYSGW 125 Query: 128 YSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 YS+RDE ++ + E GADG + PV W EEE YFFRLSAY D+LL+ Y P+F Sbjct: 126 YSVRDERFFTEAETSIGADGVRIATETGTPVTWTEEETYFFRLSAYTDRLLALYAERPDF 185 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P RRNE++SFV GL+DLS+SR TFDWG+ +P P ++MYVW+DALTNYLT G+ D Sbjct: 186 IEPEVRRNEIVSFVSGGLRDLSISRTTFDWGVPVPGHPDHVMYVWVDALTNYLTGVGFPD 245 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 + ++WPADLH+IGKDI+RFHA+YWPAFL+SA + LPKKVF+HGF+ ++GEK+SKS Sbjct: 246 TDSETFRRYWPADLHMIGKDIIRFHAVYWPAFLMSAGIELPKKVFAHGFLFNRGEKMSKS 305 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 +GNV+DP +++E GVD LRYFL+RE++ G+DG Y +DG+ R+NADLAN GNL RS+ Sbjct: 306 VGNVVDPNDLVETFGVDQLRYFLLREVSFGQDGSYSEDGIIARINADLANEFGNLAQRSL 365 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 SM+ K+ DG +P PG FT D ++L+ +L +RE+ +H AL + S++ +R Sbjct: 366 SMVAKNLDGAVPEPGEFTAEDTAMLAAADDLLDRVREHYDATAMHLALEAIWSVLGAANR 425 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 YF AQ+PW L+KT+P R +TVLY T+EV+R A+L Q +P + D+L ++ R F Sbjct: 426 YFSAQEPWVLRKTDPGRFATVLYTTLEVVRIAALLSQPVMPGTMATLLDLLGQPEDRRAF 485 Query: 487 QSLDQRLKPGFMLHKTFDPIFPRF 510 ++ RL PG L +FPR+ Sbjct: 486 SAITVRLTPGTALPAPTG-VFPRY 508 >gi|323136445|ref|ZP_08071527.1| methionyl-tRNA synthetase [Methylocystis sp. ATCC 49242] gi|322398519|gb|EFY01039.1| methionyl-tRNA synthetase [Methylocystis sp. ATCC 49242] Length = 520 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 259/494 (52%), Positives = 341/494 (69%), Gaps = 6/494 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ER ISTAI Y N PHIGHAYE I D ARF RLDG DVLF TG DEHGQK+ + Sbjct: 1 MSERPTYMISTAIPYANGAPHIGHAYERIATDAFARFKRLDGYDVLFVTGMDEHGQKMQR 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + D+ + F M + L+ DD +RTT++RH +T +W+++ GDIY Sbjct: 61 TAEKEGLTPQGLADRTAAQFARMGEALNARADDIVRTTQERHKETVLEIWRRMEANGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 YSGWYS+RDEAYY++ E+ + +G+ + PV+W+EEE +FFRLSAY KLL++Y Sbjct: 121 LSKYSGWYSVRDEAYYDESELTE-REGKKFAPTGTPVEWVEEESWFFRLSAYAGKLLAHY 179 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----YIMYVWIDALT 236 E++P+FI P RNE+I+FVK GL DLS+SR TFDWGI IP PQ ++MYVW+DALT Sbjct: 180 EANPDFITPEHYRNEIIAFVKRGLSDLSVSRTTFDWGIPIPPSPQTTANHVMYVWVDALT 239 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NY+T TG+L G +A+FWPAD HVIGKDI RFHAIYWP+FLLSA PLPK++ HGF+ Sbjct: 240 NYITATGWLTG-KGERARFWPADAHVIGKDITRFHAIYWPSFLLSAGAPLPKQIVVHGFL 298 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 +GEK+SKSLGNV+DP+E+ E GVD LRYF +REI G+DG Y + + R+NADLAN Sbjct: 299 FSRGEKMSKSLGNVVDPLELAERYGVDQLRYFFLREIPFGQDGNYSHEAIVNRINADLAN 358 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNL RS+SMI K+ G +P G T++D IL+ + L + R M + H ALA+ Sbjct: 359 DLGNLAQRSLSMIGKNCAGAVPKKGELTDADRDILAQAAIALDKARTAMNDYAPHHALAE 418 Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 + +V+E +RYF ++PW KKT+P R T+LYVT E +R+LAI LQ F+P A K+ D+ Sbjct: 419 IFRVVAEANRYFAGEEPWSKKKTDPARMETILYVTAETLRRLAIPLQPFIPDAAGKLLDL 478 Query: 477 LFVADENRCFQSLD 490 L V + R F D Sbjct: 479 LGVGPDERDFAHAD 492 >gi|209964481|ref|YP_002297396.1| methionyl-tRNA synthetase MetG [Rhodospirillum centenum SW] gi|209957947|gb|ACI98583.1| methionyl-tRNA synthetase MetG [Rhodospirillum centenum SW] Length = 520 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 257/512 (50%), Positives = 353/512 (68%), Gaps = 3/512 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M R Y++T I Y N PHIGHAY + DV+ARF RLDG DV F TGTDEHGQK+ K Sbjct: 1 MTGRTPYYLTTPIYYVNDAPHIGHAYTTVACDVMARFKRLDGFDVKFLTGTDEHGQKVQK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 +A+ AG+T K D+NS NFR++A +L++S DDFIRTTE RH + LW+++ + GD+Y Sbjct: 61 SAELAGITPKQMADRNSENFRELARLLNVSNDDFIRTTEPRHVTAVQALWQRLQESGDVY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 G YSGWYS+RDEAY+ +DE+ + DG+ + PV+W+EE YFFRLSA+Q++LL Y Sbjct: 121 LGSYSGWYSVRDEAYFGEDELVE-RDGRRFAPTGAPVEWVEEPSYFFRLSAWQERLLELY 179 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 ES P+FILP +R+EV+SFV+ GL+DLS+SR TFDWGI +P D +++MYVW+DALTNY+T Sbjct: 180 ESRPDFILPAGKRSEVVSFVRGGLRDLSISRTTFDWGIPVPGDEKHVMYVWLDALTNYIT 239 Query: 241 TTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GY + +G+ +FWPADLH++GKDILRFHA+YWPAFL++A L P++VF+HG+ + Sbjct: 240 AIGYPETGEGTLYGRFWPADLHMVGKDILRFHAVYWPAFLMAAGLEPPRRVFAHGWWTVE 299 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 GEK+SKSLGNV+ P E+I G+D RYFL+REI G DG + + + +R+N +LAN G Sbjct: 300 GEKMSKSLGNVVKPEELIGTYGLDQTRYFLMREIPFGNDGDFSRRAMVQRINGELANDYG 359 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLV R +SM+ + +G +P P AF E D +L +L +R + Q H+AL + Sbjct: 360 NLVQRVLSMVQRYCEGRLPEPAAFGEPDNRLLDAAKGLLPAVRAELDQQAFHKALDTIWQ 419 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +V + +RY D Q PW L+KT+ R TVLY E IR++A+L Q F+P+ + +I D L V Sbjct: 420 VVGDANRYVDEQAPWSLRKTDTVRLGTVLYTLAETIRRVALLTQPFMPETSARILDQLVV 479 Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 A + R F D L G L P FPR++ Sbjct: 480 AADARSFADFDTVLAAGVQLPPP-QPAFPRYV 510 >gi|56551988|ref|YP_162827.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|56543562|gb|AAV89716.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] Length = 521 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 260/507 (51%), Positives = 356/507 (70%), Gaps = 3/507 (0%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+TAI+YPN +PHIGHAYE I +D LAR+HRL G DV F TGTDEHG K+A+ A+N Sbjct: 3 QSFYITTAISYPNGKPHIGHAYEAIASDALARYHRLAGDDVYFQTGTDEHGLKMAQTARN 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + D+ S +F+ M DV +ISYD FIRTTE H+ + LWK ++D G IY G Y Sbjct: 63 RDIEPIALADEMSSHFKTMDDVYNISYDRFIRTTEAEHYKASQALWKTLADAGHIYLGRY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWYS+RDEA+Y ++E+ + G+ + Q PV+W EE +FFRLSA+QDKLL+YYE+HP Sbjct: 123 EGWYSIRDEAFYKEEELVTDSKGEKLSPQGTPVEWNVEESWFFRLSAFQDKLLAYYEAHP 182 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RRNEVISFVKSGL DLS+SR +FDWGI +PD P ++MYVWIDALTNYLT GY Sbjct: 183 DFIQPEARRNEVISFVKSGLADLSISRTSFDWGIPVPDSPGHVMYVWIDALTNYLTGAGY 242 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 DN + ++WPAD+HVIGKDI+RFHA+YWPAFL++A++ LPKKVF HGF+L++GEK+S Sbjct: 243 PDNKERFD-RYWPADIHVIGKDIIRFHAVYWPAFLMAADIALPKKVFGHGFLLNRGEKMS 301 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS+GNV+DPI++ + GVD +RYFL+RE+ G+DG Y + + R+NADLAN GNL R Sbjct: 302 KSVGNVVDPIDMAKLYGVDQIRYFLLREVTFGQDGSYSHEAIVNRINADLANDFGNLAQR 361 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 S+S+I K+ +P+P D++++ + + ++ M N ++AL + V E Sbjct: 362 SLSIIAKN-GAKVPSPEDTRAEDQALMEKIAGIPHQVATAMNNVAPNQALDAIWRGVGEA 420 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + Y Q PW ++KT+P RA T+LY T+E +RQLAIL + +P + + D+L + R Sbjct: 421 NLYISEQAPWTVRKTDPVRADTILYWTIEAVRQLAILCRWAMPASCDALLDLLGQGADQR 480 Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRFL 511 F++L L PG L K +FPRF+ Sbjct: 481 DFRALSAPLVPGLPLPKPVG-VFPRFV 506 >gi|241761929|ref|ZP_04760014.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373609|gb|EER63181.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 521 Score = 552 bits (1422), Expect = e-155, Method: Compositional matrix adjust. Identities = 260/507 (51%), Positives = 356/507 (70%), Gaps = 3/507 (0%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+TAI+YPN +PHIGHAYE I +D LAR+HRL G DV F TGTDEHG K+A+ A+N Sbjct: 3 QSFYITTAISYPNGKPHIGHAYEAIASDALARYHRLAGDDVYFQTGTDEHGLKMAQTARN 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + D+ S +F+ M DV +ISYD FIRTTE H+ + LWK ++D G IY G Y Sbjct: 63 RDIEPIALADEMSSHFKTMDDVYNISYDRFIRTTEAEHYKASQALWKTLADAGHIYLGRY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWYS+RDEA+Y ++E+ + G+ + Q PV+W EE +FFRLSA+QDKLL+YYE+HP Sbjct: 123 EGWYSIRDEAFYKEEELVTDSKGEKLSPQGTPVEWNVEESWFFRLSAFQDKLLAYYEAHP 182 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RRNEVISFVKSGL DLS+SR +FDWGI +PD P ++MYVWIDALTNYLT GY Sbjct: 183 DFIQPEARRNEVISFVKSGLADLSISRTSFDWGIPVPDSPGHVMYVWIDALTNYLTGAGY 242 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 DN + ++WPAD+HVIGKDI+RFHA+YWPAFL++A++ LPKKVF HGF+L++GEK+S Sbjct: 243 PDNKERFD-RYWPADIHVIGKDIIRFHAVYWPAFLMAADIALPKKVFGHGFLLNRGEKMS 301 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS+GNV+DPI++ + GVD +RYFL+RE+ G+DG Y + + R+NADLAN GNL R Sbjct: 302 KSVGNVVDPIDMAKLYGVDQIRYFLLREVTFGQDGSYSHEAIVNRINADLANDFGNLAQR 361 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 S+S+I K+ +P+P D++++ + + ++ M N ++AL + V E Sbjct: 362 SLSIITKN-GAKVPSPEDTRAEDQALMEKIAGIPHQVATAMNNVAPNQALDAIWRGVGEA 420 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + Y Q PW ++KT+P RA T+LY T+E +RQLAIL + +P + + D+L + R Sbjct: 421 NLYISEQAPWTVRKTDPVRADTILYWTIEAVRQLAILCRWAMPASCDALLDLLGQGADQR 480 Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRFL 511 F++L L PG L K +FPRF+ Sbjct: 481 DFRALSAPLVPGLPLPKPVG-VFPRFV 506 >gi|218510040|ref|ZP_03507918.1| methionyl-tRNA synthetase [Rhizobium etli Brasil 5] Length = 439 Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust. Identities = 249/434 (57%), Positives = 336/434 (77%), Gaps = 3/434 (0%) Query: 80 FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD 139 F+ MA +L+ S DDFIRTT++RHH+T R +W +++ GDIYK Y+GWYS+RDEAYY ++ Sbjct: 3 FQAMAKLLNASNDDFIRTTQERHHETSRNIWNLMAENGDIYKDSYAGWYSVRDEAYYQEN 62 Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199 E ADG Y Q PV+W+EE YFF+LS YQDKLL++YE++P+FI P ERRNEVISF Sbjct: 63 ETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQDKLLAHYEANPDFIGPAERRNEVISF 122 Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 VKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T TGY+++ +G +AK+WPAD Sbjct: 123 VKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYITATGYIEDRNGPRAKYWPAD 182 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 +H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KGEK+SKSLGNV+DP+ ++ Sbjct: 183 VHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKGEKMSKSLGNVVDPVNLVNH 242 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 G+D +RYF +RE++ G+DG Y ++ + R+N+DLANGIGNL SRS+SMI+K+ DG IP Sbjct: 243 FGLDQVRYFFLREVSFGQDGSYSEEAIGTRINSDLANGIGNLASRSLSMIVKNCDGKIPE 302 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 G T+ D+++L+ + RE+M Q IHRALA +I++VSE DRYF Q PW LKKT Sbjct: 303 CGLLTDEDKAMLAQADALHASTREDMGKQQIHRALASIIAVVSETDRYFAGQAPWALKKT 362 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ--RLKPGF 497 +P R TVLYVT EV+RQ+AILLQ F+P + K+ D++ + R F +L + RL G Sbjct: 363 DPVRMGTVLYVTAEVVRQIAILLQPFMPDSSGKLLDLVAAPADKRDFAALGEAGRLVAGT 422 Query: 498 MLHKTFDPIFPRFL 511 L P+FPR++ Sbjct: 423 PLEAP-TPVFPRYV 435 >gi|260752469|ref|YP_003225362.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551832|gb|ACV74778.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 521 Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust. Identities = 259/507 (51%), Positives = 356/507 (70%), Gaps = 3/507 (0%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+TAI+YPN +PHIGHAYE I +D LAR+HRL G DV F TGTDEHG K+A+ A+N Sbjct: 3 QSFYITTAISYPNGKPHIGHAYESIASDALARYHRLAGDDVYFQTGTDEHGLKMAQTARN 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + D+ S +F+ M DV +ISYD FIRTTE H+ + LWK ++D G IY G Y Sbjct: 63 RDIEPIALADEMSSHFKTMDDVYNISYDRFIRTTEAEHYKASQALWKTLADAGHIYLGRY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWYS+RDEA+Y ++E+ + G+ + Q PV+W EE +FFRLSA+QDKLL+YYE+HP Sbjct: 123 EGWYSIRDEAFYKEEELVTDSKGEKLSPQGTPVEWNVEESWFFRLSAFQDKLLAYYEAHP 182 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RRNEVISFVKSGL DLS+SR +FDWGI +PD P ++MYVWIDALTNYLT GY Sbjct: 183 DFIQPEARRNEVISFVKSGLADLSISRTSFDWGIPVPDSPGHVMYVWIDALTNYLTGAGY 242 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 DN + ++WPAD+HVIGKDI+RFHA+YWPAFL++A++ LPKKVF HGF+L++GEK+S Sbjct: 243 PDNKERFD-RYWPADIHVIGKDIIRFHAVYWPAFLMAADIALPKKVFGHGFLLNRGEKMS 301 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS+GNV+DPI++ + GVD +RYFL+RE+ G+DG Y + + R+NADLAN GNL R Sbjct: 302 KSVGNVVDPIDMAKLYGVDQIRYFLLREVTFGQDGSYSHEAIVNRINADLANDFGNLAQR 361 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 S+S+I K+ +P+P D++++ + + ++ M N ++AL + V E Sbjct: 362 SLSIIAKN-GAKVPSPEDTRAEDQALMEKIAGIPHQVATAMNNVAPNQALDAIWRGVGEA 420 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + Y Q PW ++KT+P RA ++LY T+E +RQLAIL + +P + + D+L + R Sbjct: 421 NLYISEQAPWTVRKTDPVRADSILYWTIEAVRQLAILCRWAMPASCDALLDLLGQGADQR 480 Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRFL 511 F++L L PG L K +FPRF+ Sbjct: 481 DFRALSAPLVPGLPLPKPVG-VFPRFV 506 >gi|121601643|ref|YP_989109.1| methionyl-tRNA synthetase [Bartonella bacilliformis KC583] gi|120613820|gb|ABM44421.1| methionyl-tRNA synthetase [Bartonella bacilliformis KC583] Length = 519 Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust. Identities = 255/506 (50%), Positives = 353/506 (69%), Gaps = 4/506 (0%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I YPN PHIGHAY I +D LARF RLD +V F +GTDEHG K+ K A+ + Sbjct: 6 YITTPIFYPNGAPHIGHAYNAIASDALARFQRLDRKNVFFLSGTDEHGLKMQKTAEALNI 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + D+NS F+ M L+ S DDFIRTTE+RHH TC+++WKK+ GDIY Y+GW Sbjct: 66 TPQQLADRNSALFQKMLTALNCSNDDFIRTTEERHHQTCQVMWKKMEANGDIYLDRYAGW 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 YS+R E+YY + +G + +PV+W EEE YFFRLS Y D LL +YE +P+F Sbjct: 126 YSVRQESYYEQKDTEIRENGIRCEKELGSPVEWNEEESYFFRLSRYGDALLEHYEKYPDF 185 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P ERRNE+ISFVKSGLKD+S+SR F+WG+ +P++P+++MYVW+DALTNYLT G+ D Sbjct: 186 IGPNERRNEIISFVKSGLKDISISRINFNWGVSVPNNPEHVMYVWVDALTNYLTAIGFFD 245 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 N K +WPA++HV+GKDI+RFHAIYWPAFLLSA + LPK++F+HGF+ ++GEK+SKS Sbjct: 246 N-TAQKRDYWPANVHVVGKDIIRFHAIYWPAFLLSAGIELPKRIFAHGFLFNRGEKMSKS 304 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 +GNV+DP ++I+ GVD +RYF +RE+ G+DG Y D L RVNADLAN +GNL RS+ Sbjct: 305 IGNVVDPFKMIDHYGVDQVRYFFLREVPFGQDGSYSHDSLVNRVNADLANDLGNLAQRSL 364 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 SM+ K+ D +P P F D+ +L + L+ R+ M Q H AL+ + S+++ +R Sbjct: 365 SMLQKNCDAKVPVPDTFLTQDQQLLEQSLQALEVARQTMSCQAPHLALSAIFSVIANANR 424 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 YF +++PW L+K NP R TVLYVTVE +R++ I+L F+P+ A K+ D L + ++NR Sbjct: 425 YFASEEPWSLRKNNPKRFCTVLYVTVESLRRIGIMLLPFIPQSAAKLLDSLAIPEDNRLL 484 Query: 487 QSLDQ-RLKPGFMLHKTFDPIFPRFL 511 + R++ G L + IFPR++ Sbjct: 485 HHISSLRIEEGTDLPPP-EAIFPRYI 509 >gi|283457812|ref|YP_003362406.1| methionyl-tRNA synthetase [Rothia mucilaginosa DY-18] gi|283133821|dbj|BAI64586.1| methionyl-tRNA synthetase [Rothia mucilaginosa DY-18] Length = 514 Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust. Identities = 265/507 (52%), Positives = 356/507 (70%), Gaps = 6/507 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+TAI+YPN PHIGHAYE I ADVLARF RLDG DV F TGTDEHGQK+ A+ G Sbjct: 6 FYITTAISYPNGNPHIGHAYETIAADVLARFKRLDGFDVRFMTGTDEHGQKMQTTAEKLG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T K D+NS F+ M D L+ISYD FIRTT+ H+ + +WK++ + GDIY Y+G Sbjct: 66 KTAKELADENSARFKAMNDALNISYDRFIRTTDPDHYVASQAIWKRMEENGDIYLDKYAG 125 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 WYS+RDEAYY +DE + DGQ Y A V+W EEE YFFRLS Y DKLL Y ++ Sbjct: 126 WYSVRDEAYYAEDET-EVRDGQRYAIATGTEVEWTEEESYFFRLSKYGDKLLELY-ANEG 183 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 F+ P RRNE+ISFVK GL DLS+SR TFDWG+ +P + +++MYVW+DALTNY+T GY Sbjct: 184 FVYPESRRNELISFVKGGLNDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYITGLGYP 243 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D + AK+WPADLH+IGKDI RFH+IYWPAFL SA + LPK+VF HGF+L GEK+SK Sbjct: 244 DTDNELFAKYWPADLHLIGKDITRFHSIYWPAFLWSAGIELPKRVFGHGFLLVNGEKMSK 303 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S+GNV+DP +++ G+DA+R+FL+RE++ G+DG Y ++ + R+N+DLAN +GNL RS Sbjct: 304 SVGNVVDPANLVDAFGLDAVRFFLMREVSFGQDGSYSEESIINRINSDLANNLGNLAQRS 363 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +SM+ K+ G +P G FTE+D IL + + + +R + Q HRAL ++ +++++ + Sbjct: 364 LSMVAKNCGGAVPAHGEFTEADRQILDEAAALYEPVRADFDEQAFHRALDRIWTVLADTN 423 Query: 426 RYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-EN 483 YF Q+PW L+K DR +TVLYVT+EV+RQ+A+LLQ +P K+ +L V + E+ Sbjct: 424 AYFAEQEPWTLRKNGELDRMNTVLYVTLEVVRQVALLLQPVMPDSTAKLLTLLGVPEGES 483 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510 R F +L L PG L P+FPR+ Sbjct: 484 RQFAALGTALVPGTELPAP-APVFPRY 509 >gi|325676285|ref|ZP_08155964.1| methionine--tRNA ligase [Rhodococcus equi ATCC 33707] gi|325552846|gb|EGD22529.1| methionine--tRNA ligase [Rhodococcus equi ATCC 33707] Length = 528 Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust. Identities = 255/510 (50%), Positives = 355/510 (69%), Gaps = 2/510 (0%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +R Y++TAIAYPN PHIGHAYE I +D +ARF RLDG DV F TGTDEHG K+ + A Sbjct: 15 DRPPFYLTTAIAYPNGVPHIGHAYEYISSDAIARFKRLDGFDVFFLTGTDEHGLKMQQTA 74 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GV + +NS F+ M L+ISYD FIRTT+ H + + +W+++ GDIY Sbjct: 75 AKEGVDVRDLATRNSDVFQAMDKALNISYDRFIRTTDADHLEASKAIWERMVAAGDIYLD 134 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYE 181 YSGWYS+RDEA++ ++E DG + PV+W EE Y FRLS YQD+LL++YE Sbjct: 135 TYSGWYSVRDEAFHAEEETTVLEDGTRLATETGTPVEWTEESNYTFRLSKYQDRLLAHYE 194 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +P+FI P RRNE++SFVKSGLKDLS+SR TFDWG+ +P DP ++MYVW+DALTNYLT Sbjct: 195 ENPDFIAPATRRNEILSFVKSGLKDLSISRTTFDWGVPVPGDPAHVMYVWVDALTNYLTG 254 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 G+ + ++WPA+LH+IGKDI RFH +YWPAFL+SA + LPK+VF HGF+ +KGE Sbjct: 255 AGFPNTDSAEFERYWPANLHIIGKDITRFHTVYWPAFLMSAGIELPKRVFVHGFLFNKGE 314 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS+GNV+DP+ ++E+ G+DA+R+FL+REI+ G+DG Y + + R+N DLAN +GNL Sbjct: 315 KMSKSVGNVVDPLAMVEQYGLDAVRFFLLREISYGQDGSYSHEAIVTRMNTDLANELGNL 374 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 RS+SM+ K+ D +PTPG T++D ++L+ +L+++R Q +H L + ++ Sbjct: 375 AQRSLSMVAKNCDAQVPTPGELTDADRALLAQADALLEKVRAEFDVQALHLGLEAIWHVL 434 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 E +RYF Q+PW L+KT+P R +TVLYVT+EV+R + IL+Q +P A KI D+L A Sbjct: 435 GETNRYFSQQEPWVLRKTDPARMATVLYVTLEVVRIVGILVQPVMPGSAEKILDLLGQAP 494 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 + R F L R+ G L K +FPR++ Sbjct: 495 DARAFVDLANRIVAGTPLPKPVG-VFPRYV 523 >gi|312115063|ref|YP_004012659.1| methionyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100] gi|311220192|gb|ADP71560.1| methionyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100] Length = 523 Score = 548 bits (1413), Expect = e-154, Method: Compositional matrix adjust. Identities = 256/513 (49%), Positives = 354/513 (69%), Gaps = 3/513 (0%) Query: 1 MKEREKLY--ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58 M E++K + I+TAI+YPN +PHIGHAYE + D +ARF RLDG V F TG DEHG K+ Sbjct: 1 MTEQQKPHYTITTAISYPNGEPHIGHAYEAVATDAMARFKRLDGHPVFFLTGVDEHGLKM 60 Query: 59 AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 + A G+T D+N+ F +M + LD+SYDDFIRTTE RHH++ +W+++ GD Sbjct: 61 KQTAAKEGITPTELADRNTAKFIEMLEQLDVSYDDFIRTTEPRHHESVAEIWRRMEKAGD 120 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 IY Y GWYS+RDEA+Y + E G +G Q PV+W EE+ YFFRLS Y+ KLL Sbjct: 121 IYLAGYKGWYSVRDEAFYAESETVLGGNGIRLGPQGTPVEWTEEQTYFFRLSKYEKKLLK 180 Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 +YE +P FI+P ERRNEV+SFVK GL+DLS+SR T DWGI +PD P +I+YVW+DALTNY Sbjct: 181 FYEENPGFIMPAERRNEVVSFVKGGLQDLSISRTTLDWGIPVPDAPGHIIYVWVDALTNY 240 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 +T G+ + + WPA +H+IGKDI RFHA+YWPAFL+SA LPLP++VF HGF+ + Sbjct: 241 ITAAGFPKIRSKAWKERWPAQVHIIGKDITRFHAVYWPAFLMSAKLPLPERVFGHGFLYN 300 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 +GEK+SKS+GNV+ P ++++ GVD +RY+ +RE+ G+DG + + R+NADLAN + Sbjct: 301 RGEKMSKSVGNVVAPKDLVDAYGVDQVRYYFLREVPFGQDGNITHEQMVNRINADLANDL 360 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNL RS+SMI K+ G IP P +DE IL+ + +L+ RE + Q H+AL + Sbjct: 361 GNLAQRSLSMIAKNCAGTIPEPSETDAADEPILAASAALLEANREAIDQQAPHKALDAIW 420 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 +V++ ++YF Q+PW LKKTNP R TVL+ T EV+R++AIL Q ++P + K+ D L Sbjct: 421 KVVADTNKYFAVQEPWALKKTNPARMGTVLWTTAEVVRRVAILAQPYMPSSSAKLLDQLG 480 Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 VA E+R F +L LK G + T +FPR++ Sbjct: 481 VAAEDRSFDALAHTLKAGTKI-ATPQGVFPRYV 512 >gi|254820391|ref|ZP_05225392.1| methionyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950] Length = 514 Score = 548 bits (1412), Expect = e-154, Method: Compositional matrix adjust. Identities = 250/508 (49%), Positives = 355/508 (69%), Gaps = 6/508 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++TAI YPN PHIGHAYE + D +ARF RLDG DV F TGTDEHG K+ + A G+ Sbjct: 5 YVTTAITYPNGDPHIGHAYEYVATDAIARFKRLDGFDVRFLTGTDEHGLKMVETAAAEGI 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T +NS F+ + + L+IS+D FIRTT+ HH+ + +W++++ GDIY YSGW Sbjct: 65 GTAELARRNSDVFQRLQERLNISFDRFIRTTDPDHHEASKEIWRRMAAAGDIYLDTYSGW 124 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 YS+RDE ++ + E DG + PV W EE+ YFFRLSAY DKLL++YE++P+F Sbjct: 125 YSVRDERFFVESETRLLDDGTRVAVETGAPVTWTEEQTYFFRLSAYADKLLAHYEANPDF 184 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P RRNEV+SFV GL+DLS+SR +FDWG+++P+ P ++MYVW+DALTNYLT GY D Sbjct: 185 IAPEVRRNEVVSFVAGGLRDLSISRTSFDWGVQVPEHPDHVMYVWVDALTNYLTGVGYPD 244 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 ++WPADLH+IGKDI+RFH +YWPAFL+SA + LP++VF+HGF+L++GEK+SKS Sbjct: 245 TDSEMFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGIELPRRVFAHGFLLNRGEKMSKS 304 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 +GNV+DP+ +IEE GVD +RYFL+RE+ G+DG + ++ + R+N DLAN +GNL RS+ Sbjct: 305 VGNVVDPVALIEEFGVDQVRYFLLREVPFGQDGSFSEEAIITRINTDLANELGNLAQRSL 364 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 SMI K+ G++P PG FT +D +L+ +L+ +R + ++Q +H AL + ++ E +R Sbjct: 365 SMIAKNLGGVLPEPGEFTAADTELLATADGLLERLRASFESQAMHLALEAIWLMLGEANR 424 Query: 427 YFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 YF AQ+PW L+K+ + R TVLYVT E +R A+L+Q +P+ A + D+L A + Sbjct: 425 YFSAQQPWVLRKSESEADQQRFRTVLYVTCEAVRIAALLVQPVMPESAGTLLDLLGQAQD 484 Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 R F +L RL PG +L +FPR+ Sbjct: 485 QRTFAALGARLTPGTVLPPPTG-VFPRY 511 >gi|184200670|ref|YP_001854877.1| methionyl-tRNA synthetase [Kocuria rhizophila DC2201] gi|183580900|dbj|BAG29371.1| methionyl-tRNA synthetase [Kocuria rhizophila DC2201] Length = 517 Score = 548 bits (1412), Expect = e-154, Method: Compositional matrix adjust. Identities = 259/512 (50%), Positives = 348/512 (67%), Gaps = 5/512 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ Y +TAI+YPN PHIGHAYE I AD L RF RLDG+ F TGTDEHGQK+ + Sbjct: 1 MTEQTPFYATTAISYPNGAPHIGHAYEAIAADTLVRFQRLDGVATRFQTGTDEHGQKMQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G T + D NS FR+M D L ISYD FIRTT++ H + LWK++ GDIY Sbjct: 61 TAEKLGTTPRELADANSARFREMDDELGISYDRFIRTTDEDHAAASQELWKRMEANGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 Y+GWYS+RDEAYY +DE ADGQ Y+ + W EEE YFFRLS YQD+LL Sbjct: 121 LDTYAGWYSVRDEAYYAEDETEVRADGQRYSIGTGTELTWTEEESYFFRLSRYQDRLLEL 180 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 Y + +F+ P R +E+ SFV GL+DLS+SR TFDWG+ +P +P ++MYVW+DALTNYL Sbjct: 181 YRT--DFVQPETRSHEIASFVGGGLQDLSISRTTFDWGVPVPGNPDHVMYVWVDALTNYL 238 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T G+ D +FWPA +H+IGKDI RFHA+YWPAFL+SA + LP+KVF+HGF+ ++ Sbjct: 239 TGLGFPDTDAPLFREFWPASVHLIGKDIARFHAVYWPAFLMSAGIELPRKVFAHGFLFNQ 298 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 GEK+SKS+GNVIDP ++EE G+D LR+FL+RE+ G+DG Y D + R+N+DLAN +G Sbjct: 299 GEKMSKSVGNVIDPHAMVEEYGLDQLRFFLLREVPFGQDGNYSHDAIAGRINSDLANDLG 358 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL RS+SM+ K+ G +P PG FT D ++L+ V+ E R + HR L V Sbjct: 359 NLAQRSLSMVAKNLGGEVPEPGEFTAEDLAMLAQAEDVVAEYRSAFEALAFHRGLESVWR 418 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +++ +RYF AQ+PW L+KT+P+R +TVLYVT EV+R +A+L+Q +P ++ + L Sbjct: 419 VIASANRYFTAQEPWVLRKTDPERMATVLYVTAEVLRIVAVLVQPVMPGSMARLLEQLGQ 478 Query: 480 AD-ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + E R F +L RL PG +L K +FPR+ Sbjct: 479 PEGEARMFSALGTRLAPGTVLPKP-SGVFPRY 509 >gi|317506073|ref|ZP_07963901.1| tRNA synthetase class I [Segniliparus rugosus ATCC BAA-974] gi|316255645|gb|EFV14887.1| tRNA synthetase class I [Segniliparus rugosus ATCC BAA-974] Length = 514 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 259/508 (50%), Positives = 342/508 (67%), Gaps = 4/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R YI+TAI Y N PH GHAYE I AD LARF RLDG +V F+ G DE+G K+ ++A+ Sbjct: 3 RTPYYITTAITYANGTPHFGHAYEFISADALARFARLDGKEVFFSMGMDEYGLKVQQSAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ + FVD+ + FR++ L SYD FIRTTE H + LW+++S GD+Y+G Sbjct: 63 KEGVSPQAFVDRVAERFRELHAALGSSYDRFIRTTEPAHAKASQELWRRMSANGDVYEGR 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y+GWYS+RDEA+Y ++E G DG + PV W EE YFFRLSAYQD+LL Y+ Sbjct: 123 YAGWYSVRDEAFYGEEETQLGEDGVRIAIPTGTPVAWTEESTYFFRLSAYQDRLLQLYQE 182 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 HPEFI P RRNE++SFV GLKDLS+SR +F+WG+ +PD P ++MYVW+DALTNYLT Sbjct: 183 HPEFIGPESRRNEIVSFVSQGLKDLSISRSSFNWGVPVPDSPGHVMYVWVDALTNYLTAI 242 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 G+ D+ + AKFWPADL +IGKDI RFHA+YWPAFLLSA PK+VF HGF+L+KG+K Sbjct: 243 GFPDD-TANVAKFWPADLEIIGKDITRFHAVYWPAFLLSAGFEPPKRVFGHGFVLNKGQK 301 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS G +DP ++E G DA+R+F +REI G+DG Y + + R NADL+NG+GNL Sbjct: 302 MSKSAGTGLDPFWLVETFGQDAVRFFALREIPYGQDGSYSDEAIVTRANADLSNGLGNLA 361 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R ++MI K++ G +P P AF+ DE++L +L E R + + Q ALA V LVS Sbjct: 362 QRCLTMIAKNFGGAVPRPAAFSAEDEALLGRADALLAEYRPHFEAQRPDLALAAVFDLVS 421 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + + YF AQ PW LK+ + DR +VLYVT EV+RQ AILLQ +P+ K+ D+L Sbjct: 422 QANGYFTAQAPWTLKE-DLDRMGSVLYVTAEVVRQAAILLQPAMPQATEKLLDLLGQEAA 480 Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 R F L R+ PG L + +FPR Sbjct: 481 ARSFADLASRISPGLALPEP-HAVFPRL 507 >gi|255327092|ref|ZP_05368168.1| methionine--tRNA ligase [Rothia mucilaginosa ATCC 25296] gi|255296309|gb|EET75650.1| methionine--tRNA ligase [Rothia mucilaginosa ATCC 25296] Length = 514 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 263/507 (51%), Positives = 354/507 (69%), Gaps = 6/507 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+TAI+YPN PHIGHAYE I ADVLARF RLDG DV F TGTDEHGQK+ A+ G Sbjct: 6 FYITTAISYPNGNPHIGHAYETIAADVLARFKRLDGFDVRFMTGTDEHGQKMQTTAEKLG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T K D+NS F+ M D L+ISYD FIRTT+ H+ + +WK++ + GDIY Y+G Sbjct: 66 KTAKELADENSARFKAMNDALNISYDRFIRTTDPDHYVASQAIWKRMEENGDIYLDKYAG 125 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 WYS+RDEAYY +DE + DGQ Y V+W EEE YFFRLS Y DKLL Y ++ Sbjct: 126 WYSVRDEAYYAEDET-EVRDGQRYAITTGTEVEWTEEESYFFRLSKYGDKLLELY-ANEG 183 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 ++ P RRNE+ISFVK GL DLS+SR TFDWG+ +P + +++MYVW+DALTNYLT GY Sbjct: 184 YVYPESRRNELISFVKGGLNDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLTGLGYP 243 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D + K+WPADLH+IGKDI RFH+IYWPAFL SA + LPK+VF HGF+L GEK+SK Sbjct: 244 DTDNELFTKYWPADLHLIGKDITRFHSIYWPAFLWSAGVELPKRVFGHGFLLVNGEKMSK 303 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S+GNV+DP +++ G+DA+R+FL+RE++ G+DG Y ++ + R+N+DLAN +GNL RS Sbjct: 304 SVGNVVDPANLVDAFGLDAVRFFLMREVSFGQDGSYSEESIINRINSDLANNLGNLAQRS 363 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +SM+ K+ G +PT G FTE+D IL + + + +R + Q HRAL ++ +++++ + Sbjct: 364 LSMVAKNCGGAVPTHGEFTEADRQILDQAAALYEPVRADFDEQAFHRALERIWTVLADTN 423 Query: 426 RYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-EN 483 YF Q+PW L+K DR +TVLYVT+EV+RQ+A+LLQ +P K+ +L V + + Sbjct: 424 AYFAEQEPWTLRKNGELDRMNTVLYVTLEVVRQVALLLQPVMPDSTAKLLTLLGVPEGDA 483 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510 R F +L L PG L P+FPR+ Sbjct: 484 RQFAALGTALVPGTELPAP-APVFPRY 509 >gi|312138647|ref|YP_004005983.1| methionine-tRNA ligase metg [Rhodococcus equi 103S] gi|311887986|emb|CBH47298.1| methionine-tRNA ligase MetG [Rhodococcus equi 103S] Length = 528 Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust. Identities = 254/510 (49%), Positives = 354/510 (69%), Gaps = 2/510 (0%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +R Y++TAIAYPN PHIGHAYE I +D +ARF RLDG +V F TGTDEHG K+ + A Sbjct: 15 DRPPFYLTTAIAYPNGVPHIGHAYEYISSDAIARFKRLDGFEVFFLTGTDEHGLKMQQTA 74 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GV + +NS F+ M L+ISYD FIRTT+ H + + +W+++ GDIY Sbjct: 75 AKEGVDVRDLATRNSDVFQAMDKALNISYDRFIRTTDADHLEASKAIWERMVAAGDIYLD 134 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYE 181 YSGWYS+RDEA++ ++E DG + PV+W EE Y FRLS YQD+LL++YE Sbjct: 135 TYSGWYSVRDEAFHAEEETTVLEDGTRIATETGTPVEWTEESNYTFRLSKYQDRLLAHYE 194 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +P+FI P RRNE++SFVKSGLKDLS+SR TFDWG+ +P DP ++MYVW+DALTNYLT Sbjct: 195 ENPDFIAPATRRNEILSFVKSGLKDLSISRTTFDWGVPVPGDPAHVMYVWVDALTNYLTG 254 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 G+ + ++WPA+LH+IGKDI RFH +YWPAFL+SA + LPK+VF HGF+ +KGE Sbjct: 255 AGFPNTDSAEFERYWPANLHIIGKDITRFHTVYWPAFLMSAGIELPKRVFVHGFLFNKGE 314 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS+GNV+DP+ ++E+ G+DA+R+FL+REI+ G+DG Y + + R+N DLAN +GNL Sbjct: 315 KMSKSVGNVVDPLAMVEQYGLDAVRFFLLREISYGQDGSYSHEAIVTRMNTDLANELGNL 374 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 RS+SM+ K+ D +PTPG T++D ++L+ +L ++R Q +H L + ++ Sbjct: 375 AQRSLSMVAKNCDAQVPTPGELTDADRALLAQADALLGKVRAEFDVQALHLGLEAIWHVL 434 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 E +RYF Q+PW L+KT+P R +TVLYVT+EV+R + IL+Q +P A KI D+L A Sbjct: 435 GETNRYFSQQEPWVLRKTDPARMATVLYVTLEVVRIVGILVQPVMPGSAEKILDLLGQAP 494 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 + R F L R+ G L K +FPR++ Sbjct: 495 DARAFVDLANRIVAGTPLPKPVG-VFPRYV 523 >gi|83311547|ref|YP_421811.1| methionyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] gi|82946388|dbj|BAE51252.1| Methionyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] Length = 516 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 261/513 (50%), Positives = 348/513 (67%), Gaps = 4/513 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M Y++T I Y N +PHIGHAY + DVLARF RLDG DV F TGTDEHGQK+ K Sbjct: 1 MTGAGTFYVTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVEK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 +A+ GVT + DQNS NFR++A +L + DDFIRTTE RH C+ LW K+ KGDIY Sbjct: 61 SAEAFGVTPQALADQNSANFRELAKILGCTNDDFIRTTEARHKAACQALWDKLVAKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 G Y GWYS+RDEA+Y +DE+ KGADG PV+W++E YFFRLSA+QD+LL +Y Sbjct: 121 LGAYEGWYSVRDEAFYAEDELVKGADGAKLAPTGAPVEWVKEPSYFFRLSAWQDRLLRWY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E +P+ + P RRNEV+SFVK GL+DLS+SR +F WGI +P D +IMYVW+DALTNY+T Sbjct: 181 EDNPDCVAPQSRRNEVMSFVKGGLQDLSVSRTSFKWGIPVPGDDAHIMYVWLDALTNYIT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY D G A++WP +H++GKDI+RFHA+YWPAFL++A+LP PK+VF+HG+ ++G Sbjct: 241 AVGYPDT-TGDFARYWPNVIHMVGKDIVRFHAVYWPAFLMAADLPAPKRVFAHGWWTNEG 299 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +KISKS+GNVIDP+ +IE G+D +RYFL+RE+ G DG + + R+N++LAN GN Sbjct: 300 QKISKSVGNVIDPLSLIETYGLDQVRYFLLREVPFGNDGDFSHRAMMGRMNSELANDYGN 359 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 LV RS+SMI K+ G+ P T+ D+ +L +L ++R+ M QL H A+ + + Sbjct: 360 LVQRSLSMIGKNCGGVTPAHLPDTDEDKEMLGAAYGMLAKVRDAMDRQLYHEAIEAIWVV 419 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V + Y D Q PW LKKT+P R TVL+V E IR LA+L Q F+P + +I D L V Sbjct: 420 VRAANAYVDKQAPWALKKTDPARMGTVLWVLAETIRCLALLTQPFMPAASARILDQLMVP 479 Query: 481 DENRCFQ--SLDQRLKPGFMLHKTFDPIFPRFL 511 + R F LK G L T +FPR++ Sbjct: 480 EAERSFAFFGPGHALKAGISL-PTPQGVFPRYV 511 >gi|319408565|emb|CBI82218.1| Methionyl-tRNA synthetase [Bartonella schoenbuchensis R1] Length = 519 Score = 545 bits (1403), Expect = e-153, Method: Compositional matrix adjust. Identities = 255/510 (50%), Positives = 355/510 (69%), Gaps = 4/510 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+ YI+T I YPN PHIGHAY I +D LARF RLDG DV F +GTDEHG K+ +AA+ Sbjct: 2 RDTYYITTPIFYPNGAPHIGHAYNAIASDSLARFQRLDGKDVFFLSGTDEHGLKMQQAAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 +T + D+NS F+ M L+ S DDFIRTTE+RHH TC+ +WKK+ GDIY Sbjct: 62 ALNITPQQLADRNSAIFQKMLTKLNCSNDDFIRTTEERHHRTCQAIWKKMEANGDIYLDR 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y+GWYS+R E+YY + + G DG + +PV+W EEE YFF+LS Y+ LL +YE Sbjct: 122 YAGWYSVRQESYYEEKDTQIGEDGIRREKELGSPVEWNEEESYFFKLSRYEKALLEHYEK 181 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 +P+FI P ERRNE+ISF+KSGLKD+S+SR F+WG+ +P++ +++MYVW+DALTNYLT Sbjct: 182 YPDFIAPNERRNEIISFIKSGLKDISISRTNFNWGVGVPNNSKHVMYVWVDALTNYLTAI 241 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 + N K FW A H+IGKDI+RFHAIYWPAFL+SA + LPK++F+HGF+L++G K Sbjct: 242 DFF-NEISKKRHFWSASTHIIGKDIIRFHAIYWPAFLMSAGIELPKRIFAHGFLLNRGAK 300 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNV+DP E+I+ G+D +RYF +RE+ G+DG Y+ + R+ ADL N +GNL Sbjct: 301 MSKSVGNVVDPFEIIDRYGLDQVRYFFLREVPFGQDGSYNHESFVNRITADLVNDLGNLA 360 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 RS+SMI K+ D IP P F DE +L +V++ R+ M Q H AL+ + S+V+ Sbjct: 361 QRSLSMIQKNCDAKIPAPTDFLAQDEQLLEQSLQVIEVARQAMSRQAPHLALSAIFSVVA 420 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + +RYF +++PW L K+NP+R TVLYVT+EV+R++ I+L F+P+ A K+ D L +A E Sbjct: 421 DANRYFASEEPWSLCKSNPERFFTVLYVTLEVLRRIGIMLLPFIPQSAAKLLDSLAIAKE 480 Query: 483 NRCFQSL-DQRLKPGFMLHKTFDPIFPRFL 511 +R + D ++K G L PIFPR++ Sbjct: 481 DRLLHHISDSKIKEGENLPLPV-PIFPRYV 509 >gi|118469128|ref|YP_889680.1| methionyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] gi|118170415|gb|ABK71311.1| methionyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] Length = 515 Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust. Identities = 253/511 (49%), Positives = 356/511 (69%), Gaps = 6/511 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E YI+TAIAYPN PHIGHAYE I D +ARF RLDG DV + TGTD HGQK+A+ A Sbjct: 3 EPFYITTAIAYPNGVPHIGHAYEYIATDAIARFKRLDGYDVRYLTGTDVHGQKMAETAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ +NS F+ + + L+IS+D FIRT++ H++ + +WK+++D GDIY Y Sbjct: 63 EGIPAAELARRNSDVFQRLQEKLNISFDRFIRTSDADHYEASKAIWKRMADAGDIYLDAY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWYS+RDE ++ ++E + DG + PV W EE+ YFFRLSAY D+LL+ YE H Sbjct: 123 KGWYSIRDERFFTENETTEQPDGTRIATETGAPVTWTEEQTYFFRLSAYTDRLLALYEEH 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 PEFI P RRNE++SFV GLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT G Sbjct: 183 PEFIGPDARRNEIVSFVSGGLKDLSISRTTFDWGVPVPDHPDHVMYVWVDALTNYLTGVG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 + D S ++WPADLH+IGKDI+RFH +YWPAFL+SA LPLPK++F+HG++L++GEK+ Sbjct: 243 FPDTESESFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGLPLPKRIFAHGWLLNRGEKM 302 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNV+DP+ +++ G+D +RYFL+RE+ G+DG Y++D + RVNADLAN +GNL Sbjct: 303 SKSIGNVVDPVNLVDTFGLDQVRYFLLREVPFGQDGSYNEDAIIGRVNADLANELGNLAQ 362 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SM+ K+ +P PG FT+ D ++L+ +L+ +RE+ +H AL + S++ Sbjct: 363 RSLSMVAKNLGAAVPDPGEFTDEDTALLAAADALLERVREHFDVPAMHLALEAIWSVLGA 422 Query: 424 VDRYFDAQKPWELKKTNP----DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +RYF AQ+PW L+K++ R TVLY T+EV+R ++LLQ +P+ K+ D+L Sbjct: 423 ANRYFSAQEPWVLRKSDAAEDQQRFRTVLYTTLEVVRIASLLLQPVMPESTAKLLDLLGQ 482 Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + R F ++ R+KPG L IFPR+ Sbjct: 483 PTDERDFSAIANRIKPGTSLPAP-SGIFPRY 512 >gi|301598374|pdb|2X1L|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Methionyl-Trna Synthetase In Complex With Methionine And Adenosine gi|301598375|pdb|2X1L|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Methionyl-Trna Synthetase In Complex With Methionine And Adenosine gi|301598376|pdb|2X1L|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Methionyl-Trna Synthetase In Complex With Methionine And Adenosine gi|301598377|pdb|2X1M|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Methionyl-Trna Synthetase In Complex With Methionine Length = 524 Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust. Identities = 253/511 (49%), Positives = 356/511 (69%), Gaps = 6/511 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E YI+TAIAYPN PHIGHAYE I D +ARF RLDG DV + TGTD HGQK+A+ A Sbjct: 12 EPFYITTAIAYPNGVPHIGHAYEYIATDAIARFKRLDGYDVRYLTGTDVHGQKMAETAAK 71 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ +NS F+ + + L+IS+D FIRT++ H++ + +WK+++D GDIY Y Sbjct: 72 EGIPAAELARRNSDVFQRLQEKLNISFDRFIRTSDADHYEASKAIWKRMADAGDIYLDAY 131 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWYS+RDE ++ ++E + DG + PV W EE+ YFFRLSAY D+LL+ YE H Sbjct: 132 KGWYSIRDERFFTENETTEQPDGTRIATETGAPVTWTEEQTYFFRLSAYTDRLLALYEEH 191 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 PEFI P RRNE++SFV GLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT G Sbjct: 192 PEFIGPDARRNEIVSFVSGGLKDLSISRTTFDWGVPVPDHPDHVMYVWVDALTNYLTGVG 251 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 + D S ++WPADLH+IGKDI+RFH +YWPAFL+SA LPLPK++F+HG++L++GEK+ Sbjct: 252 FPDTESESFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGLPLPKRIFAHGWLLNRGEKM 311 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNV+DP+ +++ G+D +RYFL+RE+ G+DG Y++D + RVNADLAN +GNL Sbjct: 312 SKSIGNVVDPVNLVDTFGLDQVRYFLLREVPFGQDGSYNEDAIIGRVNADLANELGNLAQ 371 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SM+ K+ +P PG FT+ D ++L+ +L+ +RE+ +H AL + S++ Sbjct: 372 RSLSMVAKNLGAAVPDPGEFTDEDTALLAAADALLERVREHFDVPAMHLALEAIWSVLGA 431 Query: 424 VDRYFDAQKPWELKKTNP----DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +RYF AQ+PW L+K++ R TVLY T+EV+R ++LLQ +P+ K+ D+L Sbjct: 432 ANRYFSAQEPWVLRKSDAAEDQQRFRTVLYTTLEVVRIASLLLQPVMPESTAKLLDLLGQ 491 Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + R F ++ R+KPG L IFPR+ Sbjct: 492 PTDERDFSAIANRIKPGTSLPAP-SGIFPRY 521 >gi|262201453|ref|YP_003272661.1| methionyl-tRNA synthetase [Gordonia bronchialis DSM 43247] gi|262084800|gb|ACY20768.1| methionyl-tRNA synthetase [Gordonia bronchialis DSM 43247] Length = 523 Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust. Identities = 264/506 (52%), Positives = 345/506 (68%), Gaps = 5/506 (0%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAIAYPN PHIGHAYE I ADVLARFHRLDG DV F TGTD HGQK+ + A+ G+ Sbjct: 18 YITTAIAYPNGAPHIGHAYEYISADVLARFHRLDGYDVRFLTGTDVHGQKMQQTAEKEGI 77 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T +NS F+ + D L SY FIRT++ H +W+++SD GDIY YSGW Sbjct: 78 PTAELARRNSDRFQALQDRLGSSYHRFIRTSDDDHKRASEAIWQRMSDNGDIYLDKYSGW 137 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y +RDE +Y D E G+ V W EEE YFFRLS YQDKLL YES P+F Sbjct: 138 YDVRDETFYADSETSVNEAGERVATDTGHVLTWTEEETYFFRLSNYQDKLLELYESDPDF 197 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P RRNEV+SFVK GL DLS+SR TFDWG+ +P P ++MYVW+DALTNYLT G+ D Sbjct: 198 IGPDVRRNEVVSFVKGGLNDLSISRTTFDWGVPVPAHPDHVMYVWVDALTNYLTGAGFPD 257 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 + + + ++WPADLH+IGKDI+RFH +YWPAFL+SA + LPK+VF HGF+L+KGEK+SKS Sbjct: 258 D-EQTLRRYWPADLHIIGKDIIRFHCVYWPAFLMSAGIDLPKRVFVHGFLLNKGEKMSKS 316 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 +GNV+DP +I E G+D +RYF +RE++ G+DG Y D + R+NADLAN GNL R++ Sbjct: 317 VGNVLDPDALIAEFGLDPVRYFFLREVSYGQDGSYSTDAIISRINADLANDFGNLAQRTL 376 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 SMI K +DG +P PG + ++D +L+ +L +R +++ Q IH AL + S++ E +R Sbjct: 377 SMIGKYFDGALPAPGVYLDADTELLARADALLDTVRAHIEVQAIHLALEAMWSVLGETNR 436 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--R 484 Y AQ+PW+L KT+ R TVLYV EV+R +A+L Q +P K+ D+L V D R Sbjct: 437 YISAQEPWKLAKTDLGRTGTVLYVCAEVVRIVALLSQPVMPASTAKLLDLLGVDDSGAAR 496 Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRF 510 F ++ RL PG L K PIFPR+ Sbjct: 497 QFSAVTDRLAPGTTLPKP-TPIFPRY 521 >gi|118465949|ref|YP_880395.1| methionyl-tRNA synthetase [Mycobacterium avium 104] gi|118167236|gb|ABK68133.1| methionyl-tRNA synthetase [Mycobacterium avium 104] Length = 519 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 251/509 (49%), Positives = 348/509 (68%), Gaps = 6/509 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++TAI YPN PH+GHAYE I D +ARF RLDG DV F TGTDEHG K+ + A G Sbjct: 4 FYVTTAITYPNGDPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDEHGLKMVETAAAEG 63 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + T +NS F+ + + L+IS+D FIRTT+ HH+ + +W+++ GDIY YSG Sbjct: 64 IGTAELARRNSDVFQRLQERLNISFDRFIRTTDPDHHEASKAIWRRMQAAGDIYLDSYSG 123 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 WYS+RDE ++ + E DG A+ P+ W EE+ YFFRLSAY DKLL++YE++P+ Sbjct: 124 WYSVRDERFFVESETKVLDDGTRVAAETGAPLTWTEEQTYFFRLSAYTDKLLAHYEANPD 183 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RRNEV+SFV GL+DLS+SR +FDWG+K+PD P ++MYVW+DALTNYLT GY Sbjct: 184 FIAPEVRRNEVVSFVSGGLRDLSISRTSFDWGVKVPDHPDHVMYVWVDALTNYLTGVGYP 243 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D ++WPADLH+IGKDI+RFH +YWPAFL+SA + LP++VF+HGF+L++GEK+SK Sbjct: 244 DTESEMFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGIELPRRVFAHGFLLNRGEKMSK 303 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S+GN++DPI +++ GVD LRYFL+RE+ G+DG Y KD + R+N DLAN +GNL RS Sbjct: 304 SVGNIVDPITLVDTFGVDQLRYFLLREVPFGQDGSYTKDAIITRINTDLANELGNLAQRS 363 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +SMI K+ ++P PG FT D +L +L +R + +Q +H L + ++ E + Sbjct: 364 LSMIAKNLHSVVPEPGDFTGDDRELLQTADGLLPRVRASFDSQAMHLGLEAIWLMLGEAN 423 Query: 426 RYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 +YF AQ+PW L+K+ + R TVLYVT EV+R A+L+Q +P A K+ D+L Sbjct: 424 KYFSAQQPWVLRKSESEADQTRFRTVLYVTCEVVRIAALLVQPVMPDSAGKLLDLLGQGQ 483 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + R F +L RL PG +L +FPR+ Sbjct: 484 DRRAFDALGARLAPGTVLPPPTG-VFPRY 511 >gi|41407070|ref|NP_959906.1| methionyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395421|gb|AAS03289.1| MetS [Mycobacterium avium subsp. paratuberculosis K-10] Length = 519 Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust. Identities = 250/509 (49%), Positives = 349/509 (68%), Gaps = 6/509 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++TAI YPN PH+GHAYE I D +ARF RLDG DV F TGTDEHG K+ + A G Sbjct: 4 FYVTTAITYPNGDPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDEHGLKMVETAAAEG 63 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + T +NS F+ + + L+IS+D FIRTT+ HH+ + +W+++ GDIY YSG Sbjct: 64 IGTAELARRNSDVFQRLQERLNISFDRFIRTTDPDHHEASKAIWRRMQAAGDIYLDSYSG 123 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 WYS+RDE ++ + E DG A+ P+ W EE+ YFFRLSAY DKLL++YE++P+ Sbjct: 124 WYSVRDERFFVESETKVLDDGTRVAAETGAPLTWTEEQTYFFRLSAYTDKLLAHYEANPD 183 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RRNEV+SFV GL+DLS+SR +FDWG+K+PD P ++MYVW+DALTNYLT GY Sbjct: 184 FIAPEVRRNEVVSFVSGGLRDLSISRTSFDWGVKVPDHPDHVMYVWVDALTNYLTGVGYP 243 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D ++WPADLH+IGKDI+RFH +YWPAFL+SA + LP++VF+HGF+L++GEK+SK Sbjct: 244 DTESEMFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGIELPRRVFAHGFLLNRGEKMSK 303 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S+GN++DPI +++ GVD LRYFL+RE+ G+DG Y +D + R+N DLAN +GNL RS Sbjct: 304 SVGNIVDPITLVDTFGVDQLRYFLLREVPFGQDGSYTEDAIITRINTDLANELGNLAQRS 363 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +SMI K+ ++P PG FT D +L +L +R + +Q +H L + ++ E + Sbjct: 364 LSMIAKNLHSVVPEPGDFTGDDRELLQTADGLLPRVRASFDSQAMHLGLEAIWLMLGEAN 423 Query: 426 RYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 +YF AQ+PW L+K+ + R TVLYVT EV+R A+L+Q +P+ A K+ D+L Sbjct: 424 KYFSAQQPWVLRKSESEADQTRFRTVLYVTCEVVRIAALLVQPVMPESAGKLLDLLGQGQ 483 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + R F +L RL PG +L +FPR+ Sbjct: 484 DRRAFDALGARLAPGTVLPPPTG-VFPRY 511 >gi|254774038|ref|ZP_05215554.1| methionyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291] Length = 519 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 250/509 (49%), Positives = 349/509 (68%), Gaps = 6/509 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++TAI YPN PH+GHAYE I D +ARF RLDG DV F TGTDEHG K+ + A G Sbjct: 4 FYVTTAITYPNGDPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDEHGLKMVETAAAEG 63 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + T +NS F+ + + L+IS+D FIRTT+ HH+ + +W+++ GDIY YSG Sbjct: 64 IDTAELARRNSDVFQRLQERLNISFDRFIRTTDPDHHEASKAIWRRMQAAGDIYLDSYSG 123 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 WYS+RDE ++ + E DG A+ P+ W EE+ YFFRLSAY DKLL++YE++P+ Sbjct: 124 WYSVRDERFFVESETKVLDDGTRVAAETGAPLTWTEEQTYFFRLSAYTDKLLAHYEANPD 183 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RRNEV+SFV GL+DLS+SR +FDWG+K+PD P ++MYVW+DALTNYLT GY Sbjct: 184 FIAPEVRRNEVVSFVSGGLRDLSISRTSFDWGVKVPDHPDHVMYVWVDALTNYLTGVGYP 243 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D ++WPADLH+IGKDI+RFH +YWPAFL+SA + LP++VF+HGF+L++GEK+SK Sbjct: 244 DTESEMFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGIELPRRVFAHGFLLNRGEKMSK 303 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S+GN++DPI +++ GVD LRYFL+RE+ G+DG Y +D + R+N DLAN +GNL RS Sbjct: 304 SVGNIVDPITLVDTFGVDQLRYFLLREVPFGQDGSYTEDAIITRINTDLANELGNLAQRS 363 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +SMI K+ ++P PG FT D +L +L +R + +Q +H L + ++ E + Sbjct: 364 LSMIAKNLHSVVPEPGDFTGDDRELLQTADGLLPRVRASSDSQAMHLGLEAIWLMLGEAN 423 Query: 426 RYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 +YF AQ+PW L+K+ + R TVLYVT EV+R A+L+Q +P+ A K+ D+L Sbjct: 424 KYFSAQQPWVLRKSESEADQTRFRTVLYVTCEVVRIAALLVQPVMPESAGKLLDLLGQGQ 483 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + R F +L RL PG +L +FPR+ Sbjct: 484 DRRAFDALGARLAPGTVLPPPTG-VFPRY 511 >gi|308177197|ref|YP_003916603.1| methionine--tRNA ligase [Arthrobacter arilaitensis Re117] gi|307744660|emb|CBT75632.1| methionine--tRNA ligase [Arthrobacter arilaitensis Re117] Length = 516 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 254/510 (49%), Positives = 346/510 (67%), Gaps = 3/510 (0%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++ YI+TAI+YPN PHIGHAYE++ DV+ARF RLDG DV F TGTDEHGQK+ + A Sbjct: 4 QQKPFYITTAISYPNGTPHIGHAYEVVATDVMARFKRLDGYDVFFMTGTDEHGQKMMQTA 63 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + +T +NS F+ M D L SYD FIRTT+ HH + LW+++ DIY Sbjct: 64 EKLEITPAQLAQRNSDAFQSMNDELGTSYDRFIRTTDADHHAAAQELWRRMEANDDIYLD 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYE 181 Y+GWYS+RDEA+Y +++ DG Y A+ + V W EEE YFFRLS YQDKLL YY Sbjct: 124 KYAGWYSVRDEAFYTEEQTEVREDGIRYAAETDTEVTWTEEESYFFRLSKYQDKLLDYYR 183 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +PEF P R NEV+ FV+SGL DLS+SR TFDWGI +P + +++MYVW+DALTNYLT Sbjct: 184 DNPEFGAPRSRFNEVVRFVESGLTDLSISRTTFDWGIPVPGNEKHVMYVWVDALTNYLTG 243 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 G+ D S K+WPAD+HVIGKDI RFHAIYWPAFL+SA LPLPK+V HGF+ + G Sbjct: 244 VGFPDVDSASFKKYWPADVHVIGKDISRFHAIYWPAFLMSAKLPLPKRVMIHGFLHNNGV 303 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGN + P + + G+D +RYF +RE+ G DG Y+ + + R+N DLAN GNL Sbjct: 304 KMSKSLGNTVSPDDFVNRYGLDQVRYFFLREVPFGADGNYNHETIVARINGDLANNFGNL 363 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 RS+SM+ K+ G++PTP +E+D +IL ++L+ RE Q +AL V ++ Sbjct: 364 AQRSLSMVAKNCGGVVPTPAELSEADNAILDAAGQLLEINREAYSRQEFSKALEAVWHVL 423 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 + + YF Q+PW+LKKT+P+R +TVLYVT+E++R++A+LLQ +P+ + + L V + Sbjct: 424 GDTNAYFAEQEPWKLKKTDPERMATVLYVTIEIVRKVALLLQPVLPQAMTSMLNALAVGE 483 Query: 482 EN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + R F+S D L PG L P+FPR+ Sbjct: 484 GSARNFESFDSALVPGTEL-PVPSPVFPRY 512 >gi|296169876|ref|ZP_06851488.1| methionine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895432|gb|EFG75134.1| methionine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 513 Score = 538 bits (1386), Expect = e-151, Method: Compositional matrix adjust. Identities = 247/508 (48%), Positives = 344/508 (67%), Gaps = 5/508 (0%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++TAI YPN PH+GHAYE + D +ARF RLDG DV F TGTDEHG K+ + A G Sbjct: 4 FYVTTAITYPNGNPHVGHAYEYVATDAIARFKRLDGFDVRFLTGTDEHGLKMMETAAAEG 63 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + T +NS F+ + + L+IS+D FIRTT+ HH+ + +W+++ GDIY YSG Sbjct: 64 IPTAELARRNSDVFQRLQEKLNISFDRFIRTTDPDHHEASQEIWRRMEAAGDIYLDSYSG 123 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WYS+RDE ++ + E + PV W EE+ YFFRLSAY DKLL++Y+++PEF Sbjct: 124 WYSVRDERFFVESETAVVEGTRVAVETGTPVTWTEEQTYFFRLSAYADKLLAHYDANPEF 183 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P RRNEV+SFV GL+DLS+SR +FDWG+K+P P +++YVW+DALTNYLT GY D Sbjct: 184 IAPEVRRNEVVSFVSGGLRDLSISRTSFDWGVKVPGHPDHVVYVWVDALTNYLTGVGYPD 243 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 ++WPADLH+IGKDI+RFH +YWPAFL+SA + LP++VF+HGF+L++GEK+SKS Sbjct: 244 TDSELFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGIDLPRRVFAHGFLLNRGEKMSKS 303 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 +GN++DP +++ GVD LRYFL+RE+ G+DG Y +D + R N DLAN +GNL RS+ Sbjct: 304 VGNIVDPDALVDTFGVDQLRYFLLREVPFGQDGSYSEDAIVTRTNTDLANELGNLAQRSL 363 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 SM+ K+ DG++P PG FT D +L V +L +R NQ +H AL + ++ +R Sbjct: 364 SMVAKNLDGIVPAPGEFTAEDTELLDVADGLLDRVRIEFDNQAMHLALEAIWLMLGAANR 423 Query: 427 YFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 YF AQ+PW L+K+ + R +TVLY T E +R A+L+Q +P+ A K+ D+L A E Sbjct: 424 YFSAQQPWVLRKSESEADRKRFATVLYTTCEAVRIAALLVQPVMPESAGKLLDLLGQAPE 483 Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 R F ++ RL PG L +FPR+ Sbjct: 484 RRGFDAVATRLAPGTALPAPTG-VFPRY 510 >gi|116671079|ref|YP_832012.1| methionyl-tRNA synthetase [Arthrobacter sp. FB24] gi|116611188|gb|ABK03912.1| methionyl-tRNA synthetase [Arthrobacter sp. FB24] Length = 519 Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust. Identities = 259/506 (51%), Positives = 342/506 (67%), Gaps = 3/506 (0%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+TAI YPN PHIGHAYE I D +ARF RLDG DV F TGTDEHG KIA+ A G Sbjct: 9 FYITTAITYPNGVPHIGHAYEYIATDAMARFKRLDGYDVFFLTGTDEHGMKIAQTADKEG 68 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T K VD+N+ ++ L ISYD FIRTT++ H+ + +WKK+ GDIY Y G Sbjct: 69 ITPKELVDRNAEIYKAAHAALGISYDRFIRTTDEDHYAASQAIWKKMEANGDIYLSKYEG 128 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 WYS+RDEAYY +DE DG Y+ + + + W EE YFFRLSAYQDKLL+ YE+HPE Sbjct: 129 WYSVRDEAYYVEDETVVKEDGLRYSRETDTELTWTAEESYFFRLSAYQDKLLALYEAHPE 188 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 F P R NEVISFVK GL+DLS+SR TFDWG+ +P + +++MYVW+DALTNYLT GY Sbjct: 189 FGAPQSRFNEVISFVKRGLEDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLTGVGYP 248 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D S K+WPAD+HVIGKDI RFHAIYWPAFL+SA L LPK++ HGF+ + G K+SK Sbjct: 249 DTESDSFKKYWPADVHVIGKDISRFHAIYWPAFLMSAGLELPKRIMIHGFLNNNGVKMSK 308 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGNV+ P + + + G+D +R+F +RE+ G DG Y + + R+N+DLAN GNL RS Sbjct: 309 SLGNVVAPSDFVAQYGLDQVRFFFLREVPFGADGSYSHEAIVGRMNSDLANNFGNLAQRS 368 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +SM+ K+ +G +P PGAFT D ++L + +L+ R + Q RAL + ++ + + Sbjct: 369 LSMVAKNCEGRVPVPGAFTAEDSALLEQANGLLEAARAAFEKQEFSRALEAIWGVLGDTN 428 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENR 484 YF Q PW L+KT+ +R +TVLYVT+EV+R +AIL+Q +PK + + D L D E R Sbjct: 429 AYFAEQAPWVLRKTDVERMNTVLYVTLEVLRIVAILVQPVMPKASAALLDTLGQPDGEAR 488 Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRF 510 F ++ L PG L PIFP++ Sbjct: 489 RFAAIATPLVPGTELPAP-SPIFPKY 513 >gi|260905420|ref|ZP_05913742.1| methionyl-tRNA synthetase [Brevibacterium linens BL2] Length = 573 Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust. Identities = 250/473 (52%), Positives = 341/473 (72%), Gaps = 3/473 (0%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++TAIAYPN HIGHAYE I AD +ARF RLD +V F TGTDEHG K+ +AA G+ Sbjct: 4 YLTTAIAYPNGAIHIGHAYEYIAADTIARFKRLDNHEVFFATGTDEHGLKMLQAANKLGI 63 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + K D N++NFRD L ++D FIRTT++ H++ + +W+K+ + GDIY Y+GW Sbjct: 64 SPKELADDNAKNFRDTQLALGSTFDRFIRTTDEDHYEASKAIWRKLEEAGDIYLDTYAGW 123 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 YS+RDEA+Y DE + DG + + V W EEE YFFRLS YQDKLL Y++HPEF Sbjct: 124 YSVRDEAFYTQDET-EVVDGVRLSTETRTEVTWTEEESYFFRLSNYQDKLLELYKNHPEF 182 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P RRNEV SFV SGLKDLS+SR TFDWG+ +P + +++MYVWIDALTNYLT GY D Sbjct: 183 IGPDSRRNEVASFVASGLKDLSVSRTTFDWGVPVPGNEKHVMYVWIDALTNYLTAAGYPD 242 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 + + K+WPAD+H+IGKDI+RFH++YWPAFL+SA + LPK+V +HGF+ + GEK+SKS Sbjct: 243 DQE-RLDKWWPADVHIIGKDIIRFHSVYWPAFLMSAGIELPKRVHAHGFLFNAGEKMSKS 301 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 +GNV+DPI++++ G+D LR+FL RE + G DG Y KD + R N+DLAN GNL RS+ Sbjct: 302 VGNVVDPIDLVDAFGLDTLRFFLFREFSYGNDGSYTKDSIITRKNSDLANEYGNLAQRSL 361 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 SMI K+ D +P PG T+ DE++L++ V R ++ Q +H + +++E +R Sbjct: 362 SMIAKNCDAQVPQPGELTDDDEALLALARAVPDNARRHVDTQALHLYVEACWKVLTEANR 421 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 YF AQ+PW+LKKT+PDR +TVL+VT+EV+R ++IL+Q +P+ A KI D+L V Sbjct: 422 YFSAQEPWKLKKTDPDRMATVLWVTIEVVRIISILIQPVMPESAGKILDLLGV 474 >gi|288958659|ref|YP_003449000.1| methionyl-tRNA synthetase [Azospirillum sp. B510] gi|288910967|dbj|BAI72456.1| methionyl-tRNA synthetase [Azospirillum sp. B510] Length = 519 Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust. Identities = 256/515 (49%), Positives = 351/515 (68%), Gaps = 8/515 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + Y++T I Y N PHIGHAY + DVLARF RLDG DV F TGTDEHGQK+ K Sbjct: 4 MAGPKTFYLTTPIYYVNDVPHIGHAYTTLACDVLARFMRLDGYDVKFLTGTDEHGQKVEK 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 +A+ AG+ + F D+ SRNFRD+ +++ S DDFIRTTE RH + + LW + D+G+IY Sbjct: 64 SAEKAGIAPQDFTDRVSRNFRDLVSLMNYSNDDFIRTTEPRHVKSVQALWTLLKDRGEIY 123 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 G Y+GWYS+RDEA+Y +DE+ +G+ +W+EE YFF+LSA+QD+L+ +Y Sbjct: 124 LGSYAGWYSVRDEAFYGEDELTTNPEGKKIAPTGAECEWVEEPSYFFKLSAWQDRLIEFY 183 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E +P+FI P +RNEV++FVKSGLKDLS+SR TF WGI +P D +IMYVW+DAL NY+T Sbjct: 184 ERNPDFIAPAGKRNEVMAFVKSGLKDLSVSRTTFKWGIPVPGDDAHIMYVWLDALANYIT 243 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY D G AK+WPADLH++GKDILRFHA+YWPAFL++A L PK+VF+HG+ +G Sbjct: 244 AVGYPDT-TGDYAKYWPADLHMVGKDILRFHAVYWPAFLMAAGLQPPKRVFAHGWWTIEG 302 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKSLGNVI P ++ G+D RYFL+RE+ G DG + + R+N +LAN GN Sbjct: 303 QKMSKSLGNVIAPETLVTTYGLDQTRYFLLREVPFGNDGDFSHKQMVNRINGNLANDYGN 362 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 LV R +SMI K+ +PTPGAFTE+D+++L +L +R ++ Q H+AL + ++ Sbjct: 363 LVQRVLSMIGKNCAAAVPTPGAFTEADQALLGPAYGLLDVVRAEIRAQAFHKALDAIWAV 422 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V + +RY D Q PW LKKT+P R +TVLYV E IR LAIL Q +P + +I D+L + Sbjct: 423 VGDANRYVDEQAPWALKKTDPARMATVLYVLAETIRHLAILTQPVMPDASARILDLLALG 482 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDP----IFPRFL 511 + R F +L G ++ T P +FPR++ Sbjct: 483 PDARGFGTLGPS---GALVAGTPLPTPQGVFPRYV 514 >gi|296394638|ref|YP_003659522.1| methionyl-tRNA synthetase [Segniliparus rotundus DSM 44985] gi|296181785|gb|ADG98691.1| methionyl-tRNA synthetase [Segniliparus rotundus DSM 44985] Length = 514 Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust. Identities = 254/508 (50%), Positives = 339/508 (66%), Gaps = 4/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R Y++TAI Y N PH GHAYE I AD ARF RLDG DV F+ G DE+GQK+ ++A+ Sbjct: 3 RTPYYLTTAITYANGAPHFGHAYEFISADAFARFARLDGKDVFFSVGMDEYGQKVQQSAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ + FVD+ + F ++ L SYD FIRTTE H + + LW+++ GDIY+G Sbjct: 63 KEGISPQEFVDRVAERFLELHAALGSSYDRFIRTTEPGHTASVQELWRRMDANGDIYQGS 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y+GWYS+RDEA+Y ++E G DG + +A PV W EE YFFRLSAYQD+LL+ YE Sbjct: 123 YTGWYSVRDEAFYGEEETCVGEDGVRIASATGTPVAWTEESTYFFRLSAYQDRLLALYEE 182 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 HPEFI P RRNE++ FV GLKDLS+SR +F+WG+ +P DP+++MYVW+DALTNYLT Sbjct: 183 HPEFIGPDSRRNEIVRFVSQGLKDLSVSRSSFNWGVPVPGDPEHVMYVWVDALTNYLTAI 242 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 G+ + G AKFWPADL +IGKDI RFHA+YWPAFLLSA PK+VF HGF+L+KG K Sbjct: 243 GFPGDEAGV-AKFWPADLQIIGKDITRFHAVYWPAFLLSAGFAPPKRVFGHGFVLNKGHK 301 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS G +DP +IE G DA+R+F +REI G+DG Y + + R NA+L+NG+GNL Sbjct: 302 MSKSAGTGLDPFWLIETFGQDAVRFFALREIPYGQDGSYSDEAIVTRANAELSNGLGNLA 361 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R ++MI K++ G +P PGA DE++L+ +L R + Q A+A V +VS Sbjct: 362 QRCLTMIAKNFGGTVPDPGALAAEDEALLAQADGMLAAYRPHFAAQRPDLAIAAVFDVVS 421 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + YF AQ PW LK+ + R T+LY T EV+RQ AILLQ +P+ + K+ D+L + Sbjct: 422 LANGYFTAQAPWTLKE-DLGRMGTILYTTAEVVRQAAILLQPAMPQASEKLLDLLGQSSG 480 Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 R F L RL PG L + +FPR Sbjct: 481 ARMFADLPARLAPGLALPEP-KAVFPRL 507 >gi|217976728|ref|YP_002360875.1| methionyl-tRNA synthetase [Methylocella silvestris BL2] gi|217502104|gb|ACK49513.1| methionyl-tRNA synthetase [Methylocella silvestris BL2] Length = 519 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 247/508 (48%), Positives = 346/508 (68%), Gaps = 6/508 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+TAI Y N PHIGHAYE I D +ARF RLDG + LF TG DEHGQK+ + A Sbjct: 6 FYITTAIPYANGAPHIGHAYERIATDAIARFKRLDGYETLFVTGMDEHGQKMQQTAAREN 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 ++ D+ + F M ++L+ S DD +RTTE RHH + +WK++ GDIY Y G Sbjct: 66 LSPLQLADRTAAQFYAMGELLNASADDIVRTTEARHHAASQEIWKRMQASGDIYLSKYPG 125 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WYS+RDEA+++D E+ G G PV+W+EEE Y+FRLSAYQ++LL+ Y P+F Sbjct: 126 WYSVRDEAFFDDSELTDGPGGSKLAPTGAPVEWVEEESYYFRLSAYQERLLALYRERPDF 185 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 + P + RNE+++FV+ GL DLS+SR TFDWG+ +P DP+++MYVW+DALTNY+T TG+ D Sbjct: 186 VTPEKYRNEIVAFVERGLTDLSISRSTFDWGVPVPGDPKHVMYVWVDALTNYITGTGFPD 245 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 +AKFWPAD HVIGKDI RFHAIYWPAFL+SA L +PK++ +HGF+ ++GEK+SKS Sbjct: 246 A-ASPRAKFWPADAHVIGKDITRFHAIYWPAFLMSAGLLVPKQIVTHGFLFNRGEKMSKS 304 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 +GNVIDP + +E GVD RYFL+RE+ G+DG Y + + R NADLAN +GNL RS+ Sbjct: 305 IGNVIDPFALAKEYGVDPFRYFLLREVPFGQDGNYSHEAIVNRTNADLANDLGNLAQRSL 364 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 SM+ K+ G++P+ A E+DE++L + Q+ R +M++ +H LA++ +V E +R Sbjct: 365 SMLAKNCGGVLPSSPALNETDEALLFQARALPQKARGHMRDYALHLILAEIWRVVGEANR 424 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 YF ++PW +KT+P R +VLYVTVEV+R +AI+ Q F+P ++ D L VA + R F Sbjct: 425 YFATEEPWVKRKTDPARMESVLYVTVEVLRIIAIMTQPFMPASMERLLDSLGVAKDARSF 484 Query: 487 QSLDQ---RLKPGFMLHKTFDPIFPRFL 511 + R G + T P+FPR++ Sbjct: 485 ADAENFILRAPSGPLPAPT--PVFPRYV 510 >gi|294083928|ref|YP_003550685.1| methionyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum marinum IMCC1322] gi|292663500|gb|ADE38601.1| Methionyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum marinum IMCC1322] Length = 516 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 260/514 (50%), Positives = 358/514 (69%), Gaps = 13/514 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I Y N +PHIGHAY + DV+ARF RLDG +V F TGTDEHGQK+ KAAQ Sbjct: 4 KKFYITTPIYYVNDKPHIGHAYTTLACDVMARFKRLDGFEVKFLTGTDEHGQKVEKAAQV 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + + F + S+NFRD+ L+ S DDFIRTTE+RH C+ LW+ + DKG I Y Sbjct: 64 AGTSPQEFTNAVSQNFRDLTTQLNFSNDDFIRTTEERHKLACQQLWRILLDKGYIRLDTY 123 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 +GWY++RDEA+Y DE+ G PV+W+EE YFF LS +QDKLL++YE++P Sbjct: 124 AGWYAVRDEAFYTKDEIVDGK-----APSGAPVEWVEEPSYFFDLSKFQDKLLAFYEANP 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +F+ P R NEV SFVK GL+DLS+SR +F WG+ +PDD ++MYVW+DALTNY+T TG+ Sbjct: 179 DFVAPASRFNEVKSFVKGGLRDLSVSRASFKWGVPVPDDDAHVMYVWLDALTNYITATGW 238 Query: 245 -LDNPDGSKA---KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 +D G+ K WPADLH++GKDILRFHA+YWPAFL++A+LPLPK+VF+HG+ ++G Sbjct: 239 PVDGAFGNAETYEKLWPADLHMVGKDILRFHAVYWPAFLMAADLPLPKRVFAHGWWTNEG 298 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +KISKSLGNVIDP+ + E G+D RYFL+RE+ GKDG + + +R+N+DLAN +GN Sbjct: 299 QKISKSLGNVIDPVALSEIYGLDQTRYFLMREVPFGKDGDFSVQAMIQRMNSDLANDLGN 358 Query: 361 LVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 L R +SMI K+ +G++P P + + D +IL+ C +L ++R ++ Q H AL + Sbjct: 359 LSQRVISMIFKNCEGVMPALPVSPSPEDNAILTACDALLDQVRIHIDQQSFHEALRSIWD 418 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +++ +RY D+Q PW LKKT+P R VL V E+IRQ AIL Q F+P+ KI D L V Sbjct: 419 VIAAANRYVDSQAPWGLKKTDPARMQEVLAVLAEIIRQFAILTQPFMPQSTAKILDQLGV 478 Query: 480 ADENRCFQSL--DQRLKPGFMLHKTFDPIFPRFL 511 ++ R F +L RL G ++ K +P+FPRF+ Sbjct: 479 DEKARGFDTLAGQVRLATGHVIGKP-EPVFPRFV 511 >gi|240169909|ref|ZP_04748568.1| methionyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478] Length = 516 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 252/514 (49%), Positives = 351/514 (68%), Gaps = 5/514 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 MK + Y++TAIAYPNA PH+GHAYE I D +ARF RLDG DV F TGTDEHG K+A+ Sbjct: 1 MKPLQPYYVTTAIAYPNAAPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDEHGLKVAQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA AGV T +NS F+ M + L+IS+D FIRTT+ H+ + +W+++ GD+Y Sbjct: 61 AAAAAGVPTAQLARRNSDVFQRMQEALNISFDRFIRTTDPDHYAASQEIWRRMEAAGDLY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 YSGWYS+RDE ++ + E + PV W EE+ YFFRLSAY DKLL++Y Sbjct: 121 LDNYSGWYSVRDERFFVESETQLVDGTRIAIETGTPVTWTEEQTYFFRLSAYADKLLAHY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 +HP+FI P RRNEVISFV GLKDLS+SR +F+WG+ +P+ P ++MYVW+DALTNYLT Sbjct: 181 HAHPDFIAPEVRRNEVISFVSGGLKDLSVSRTSFNWGVPVPEHPDHVMYVWVDALTNYLT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY D S ++WPADLH+IGKDI+RFHA+YWPAFL+SA + LP+KVF+HGF+ ++G Sbjct: 241 GAGYPDTGSESFRRYWPADLHMIGKDIIRFHAVYWPAFLMSAGIELPRKVFAHGFLHNRG 300 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKS+GNVIDP+ +I+ GVD +RYFL+RE+ G+DG Y + + R+N DLAN +GN Sbjct: 301 EKMSKSVGNVIDPVALIQAYGVDQVRYFLLREVPFGQDGSYSDEAIVTRINTDLANELGN 360 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L RS+SM+ K+ G++P PG F ++D +L+ +L +R + Q +H AL + + Sbjct: 361 LAQRSLSMVAKNLGGVVPEPGEFCDADTELLATADGLLDRVRAHFDRQAMHLALEAIWLM 420 Query: 421 VSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 + + ++YF Q+PW L+K+ + R T LY T EV+R A+L+Q +P+ A K+ D+ Sbjct: 421 LGDANKYFSTQQPWVLRKSESEADQARFRTTLYTTCEVVRIAALLVQPVMPESAAKMLDL 480 Query: 477 LFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 L D+ R F ++ RL PG L +FPR+ Sbjct: 481 LGQPDDRRAFSAVGTRLAPGTQLPPPTG-VFPRY 513 >gi|221229512|ref|YP_002502928.1| methionyl-tRNA synthetase [Mycobacterium leprae Br4923] gi|219932619|emb|CAR70331.1| putative methionyl-tRNA synthase [Mycobacterium leprae Br4923] Length = 537 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 250/509 (49%), Positives = 355/509 (69%), Gaps = 7/509 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAIAYPNA PHIGHAYE I D +ARF RLDGLDV F TGTDEHG K+A+AA+ AGV Sbjct: 5 YITTAIAYPNAAPHIGHAYEYIATDAIARFKRLDGLDVRFLTGTDEHGLKVAQAAEAAGV 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T +NS F+ M + L IS+D FIRTT+ H+ + +W+++ GDIY G YSGW Sbjct: 65 PTAQLARRNSGVFQRMQEALHISFDRFIRTTDADHYKAAKEIWRRMDAAGDIYLGTYSGW 124 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWME-EEGYFFRLSAYQDKLLSYYESHPE 185 YS+RDE ++ D E +G + PV W E E+ YFFRLSAY DKLL++Y+++P+ Sbjct: 125 YSVRDERFFVDSETKLLDNGIRVAVETGTPVTWTEKEQTYFFRLSAYVDKLLAHYDANPD 184 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RRNEVISFV GL+D S+SR +FDWG+++P+ P ++MYVWIDALTNYLT G+ Sbjct: 185 FIGPEVRRNEVISFVSGGLEDFSISRTSFDWGVQVPEHPDHVMYVWIDALTNYLTGAGFP 244 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D ++WPA+LH+IGKDI+RFHA+YWPAFL+SA + LP+++F+HGF+ + GEK+SK Sbjct: 245 DTDSELFGRYWPANLHMIGKDIIRFHAVYWPAFLMSAGIELPRRIFAHGFLHNHGEKMSK 304 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S+GN++DP+ +++ GVD +RYFL+REI G+DG Y ++ + R+N DLAN GNL RS Sbjct: 305 SVGNIVDPMALVQTFGVDQVRYFLLREIPFGQDGNYSEEAIITRMNTDLANEFGNLAQRS 364 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +SM+ K+ G++P P FT +D ++L+ +L+ +R N Q ++ AL + ++ E + Sbjct: 365 LSMVAKNLGGVVPEPSEFTSADTALLTTADGLLERVRGNFDGQAMNLALEAIWLMLGEAN 424 Query: 426 RYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 +YF +Q+PW L+K+ + R TVLY T EV+R A+L+Q +P+ A K+ D+L + Sbjct: 425 KYFSSQQPWILRKSESEADQARFRTVLYTTCEVVRIAALLVQPVMPESAGKMLDLLGQEE 484 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + R F ++ RL PG +L +FPR+ Sbjct: 485 DQRAFTAVSVRLAPGTVLPPPTG-VFPRY 512 >gi|220913018|ref|YP_002488327.1| methionyl-tRNA synthetase [Arthrobacter chlorophenolicus A6] gi|219859896|gb|ACL40238.1| methionyl-tRNA synthetase [Arthrobacter chlorophenolicus A6] Length = 519 Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust. Identities = 257/511 (50%), Positives = 344/511 (67%), Gaps = 3/511 (0%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 E+ YI+TAI YPN PHIGHAYE I D +ARF RLDG DV+F TGTDEHG KIA+ Sbjct: 4 SEKTPFYITTAITYPNGVPHIGHAYEYIATDAMARFKRLDGYDVMFLTGTDEHGMKIAQT 63 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G+T K VD+N+ ++ + L I+YD FIRTT++ H+ + +WKK+ GDIY Sbjct: 64 AEKEGITPKELVDRNAEIYKAAHEALGITYDRFIRTTDEDHYAASQAIWKKMEANGDIYL 123 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYY 180 Y GWYS+RDEA+Y +DE DG Y+ + + V W EE YFFRLSAYQDKLL+ Y Sbjct: 124 DKYEGWYSVRDEAFYGEDETVVKDDGVRYSKETDTEVTWTAEESYFFRLSAYQDKLLALY 183 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E+ PEF P R NEVISFVK GL+DLS+SR TFDWG+ +P + ++MYVW+DALTNYLT Sbjct: 184 EAQPEFGAPQSRFNEVISFVKRGLEDLSISRTTFDWGVPVPGNSNHVMYVWVDALTNYLT 243 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY D +FWPAD+HVIGKDI RFHAIYWPAFLLSA L LPK+V HGF+ + G Sbjct: 244 GVGYPDVDSEKFRRFWPADVHVIGKDISRFHAIYWPAFLLSAGLELPKRVMIHGFLHNNG 303 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKSLGNV+ P + +E+ G+D +R+F +RE+ G DG Y+ + + R+N+DLAN GN Sbjct: 304 VKMSKSLGNVVAPADFVEQYGLDQVRFFFLREVPFGADGSYNHEAIVGRMNSDLANNFGN 363 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L RS+SM+ K+ G +PTPGAFT++D +IL +L R Q RAL + ++ Sbjct: 364 LAQRSLSMVAKNCGGAVPTPGAFTDADTAILEQAGGLLDNARAAFDKQEFSRALEAIWAV 423 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 + + + YF Q PW L+KT+ +R +TVLYVT+EV+R +AIL Q +P ++ D L Sbjct: 424 LGDTNAYFAEQAPWVLRKTDVERMNTVLYVTLEVLRIVAILAQPVMPGSTARLLDALGQP 483 Query: 481 D-ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + R F ++ R+ G L P+FP++ Sbjct: 484 EGDARQFGAVATRIAAGTPLPAP-APVFPKY 513 >gi|15827034|ref|NP_301297.1| methionyl-tRNA synthetase [Mycobacterium leprae TN] gi|25009393|sp|Q9CD55|SYM_MYCLE RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|13092581|emb|CAC29746.1| putative methionyl-tRNA synthase [Mycobacterium leprae] Length = 537 Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust. Identities = 249/509 (48%), Positives = 354/509 (69%), Gaps = 7/509 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAIAYPNA PHIGHAYE I D +ARF RLDGLDV F TGTDEHG K+A+AA+ AGV Sbjct: 5 YITTAIAYPNAAPHIGHAYEYIATDAIARFKRLDGLDVRFLTGTDEHGLKVAQAAEAAGV 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T +NS F+ M + L IS+D FIRTT+ H+ + +W+++ GDIY G YSGW Sbjct: 65 PTAQLARRNSGVFQRMQEALHISFDRFIRTTDADHYKAAKEIWRRMDAAGDIYLGTYSGW 124 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWME-EEGYFFRLSAYQDKLLSYYESHPE 185 YS+RDE ++ D E +G + V W E E+ YFFRLSAY DKLL++Y+++P+ Sbjct: 125 YSVRDERFFVDSETKLLDNGIRVAVETGTLVTWTEKEQTYFFRLSAYVDKLLAHYDANPD 184 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RRNEVISFV GL+D S+SR +FDWG+++P+ P ++MYVWIDALTNYLT G+ Sbjct: 185 FIGPEVRRNEVISFVSGGLEDFSISRTSFDWGVQVPEHPDHVMYVWIDALTNYLTGAGFP 244 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D ++WPA+LH+IGKDI+RFHA+YWPAFL+SA + LP+++F+HGF+ + GEK+SK Sbjct: 245 DTDSELFGRYWPANLHMIGKDIIRFHAVYWPAFLMSAGIELPRRIFAHGFLHNHGEKMSK 304 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S+GN++DP+ +++ GVD +RYFL+REI G+DG Y ++ + R+N DLAN GNL RS Sbjct: 305 SVGNIVDPMALVQTFGVDQVRYFLLREIPFGQDGNYSEEAIITRMNTDLANEFGNLAQRS 364 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +SM+ K+ G++P P FT +D ++L+ +L+ +R N Q ++ AL + ++ E + Sbjct: 365 LSMVAKNLGGVVPEPSEFTSADTALLTTADGLLERVRGNFDGQAMNLALEAIWLMLGEAN 424 Query: 426 RYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 +YF +Q+PW L+K+ + R TVLY T EV+R A+L+Q +P+ A K+ D+L + Sbjct: 425 KYFSSQQPWILRKSESEADQARFRTVLYTTCEVVRIAALLVQPVMPESAGKMLDLLGQEE 484 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + R F ++ RL PG +L +FPR+ Sbjct: 485 DQRAFTAVSVRLAPGTVLPPPTG-VFPRY 512 >gi|326383789|ref|ZP_08205474.1| methionyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395] gi|326197553|gb|EGD54742.1| methionyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395] Length = 523 Score = 531 bits (1369), Expect = e-149, Method: Compositional matrix adjust. Identities = 256/506 (50%), Positives = 348/506 (68%), Gaps = 5/506 (0%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+TAIAYPN PHIGHAYE I ADVLARF LDG DV F +GTDEHGQK+ + A+ G Sbjct: 12 FYITTAIAYPNGAPHIGHAYEFISADVLARFKALDGFDVRFQSGTDEHGQKMQQTAEKEG 71 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 V+T NS F + L FIRTT+ HH +WK++ GDIY Y+G Sbjct: 72 VSTAELAKTNSDRFEALHMALGTDLSRFIRTTDTDHHRASEEIWKRMEAAGDIYLDSYAG 131 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYESHPE 185 WY +RDEA++ +DE ADG+ ++ V W EE+ YFFRLS YQD+LL+ Y+ HPE Sbjct: 132 WYDVRDEAFFTEDETTVDADGRRVATENGHVLTWTEEQTYFFRLSNYQDRLLALYDEHPE 191 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RRNEV SFV GL DLS+SR TFDWG+K+P P ++MYVW+DALTNYLT G+ Sbjct: 192 FIGPDVRRNEVRSFVAGGLNDLSISRTTFDWGVKVPGAPDHVMYVWVDALTNYLTGVGFP 251 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D+ + + +++WPADLH+IGKDI+RFH +YWPAFL+SA L +P++VF+HGF+ ++GEK+SK Sbjct: 252 DD-EQTLSRYWPADLHIIGKDIIRFHCVYWPAFLMSAGLEVPRRVFAHGFLFNRGEKMSK 310 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S+GNV+DP E++E+ G+DA+RYF +RE++ G+DG Y D + R NADLAN GNL R+ Sbjct: 311 SIGNVVDPHELVEQFGLDAVRYFFLREVSYGQDGSYSADAIVARNNADLANEYGNLAQRT 370 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +SMI K ++ +P PG FT++D ++L +L ++RE Q IH L V +++++ + Sbjct: 371 LSMIGKYFESRVPQPGEFTDADRALLDAADALLPKVREQFDKQSIHLGLEAVWTVLADAN 430 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV--ADEN 483 RY AQ+PW+L KT+ DR TVLYV EV+R + +L+Q +P+ + D+L V DEN Sbjct: 431 RYVSAQEPWKLAKTDLDRTGTVLYVCAEVVRIVTVLVQPVMPQSTATLLDLLAVPSGDEN 490 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPR 509 R F ++ RL G L K P+FPR Sbjct: 491 RQFTAVVDRLAVGAELPKP-TPVFPR 515 >gi|296445799|ref|ZP_06887751.1| methionyl-tRNA synthetase [Methylosinus trichosporium OB3b] gi|296256627|gb|EFH03702.1| methionyl-tRNA synthetase [Methylosinus trichosporium OB3b] Length = 516 Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust. Identities = 253/509 (49%), Positives = 350/509 (68%), Gaps = 9/509 (1%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ISTAI Y N PHIGHAYE I D ARF RLDG DVLF TG DEHGQK+ + A+ G+T Sbjct: 2 ISTAIPYANGAPHIGHAYERIATDAFARFKRLDGYDVLFVTGMDEHGQKMQRTAEREGLT 61 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D+ + F+ M + L+ DD +RTT+ RH T +W+++ GDIY Y GWY Sbjct: 62 PQQLADRTAAQFQTMGETLNALADDVVRTTQPRHAATVLEIWRRMEAAGDIYLAKYCGWY 121 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 S+RDEAYY++ E+ + +G+ PV+W+EEE +FF+LSAY D+LL++YE+HP+FI Sbjct: 122 SVRDEAYYDESEISE-VEGKKLAPTGTPVEWVEEESWFFKLSAYADRLLAHYEAHPDFIT 180 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----YIMYVWIDALTNYLTTTGY 244 P + +NE+++FVK GL DLS+SR TFDWGI +P+ P+ ++MYVW+DALTNY+T TG+ Sbjct: 181 PDKYKNEIVAFVKRGLSDLSISRTTFDWGIPVPEKPETNAKHVMYVWVDALTNYITATGF 240 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 L +G + +FWPA+ HVIGKDI RFHAIYWPAFL+SA PLPK++ HGF+ +GEK+S Sbjct: 241 LTG-EGDRTRFWPANAHVIGKDITRFHAIYWPAFLMSAGAPLPKQIVVHGFLFSRGEKMS 299 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSLGNV+DPI++ GVD LRYF +REI G+DG Y + + R+NADLAN +GNL R Sbjct: 300 KSLGNVVDPIDLATRYGVDQLRYFFLREIPFGQDGNYSHEAIVNRINADLANDLGNLAQR 359 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 S+SMI K+ G +P+PG TE+D ++L+ + L++ R + H ALA++ +V + Sbjct: 360 SLSMIAKNCGGKVPSPGELTEADRALLAEAAAALEKARAAIDAYAPHLALAEIFGVVGDA 419 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 +RYF ++PW KKT+P R T+LYVT E +R+LAI LQ F+P A + ++L VA+ R Sbjct: 420 NRYFAGEEPWTKKKTDPKRMETILYVTAEALRRLAIPLQPFIPSAAASLLNLLGVAESAR 479 Query: 485 CFQSLDQR--LKPGFMLHKTFDPIFPRFL 511 F S + L G L P+FPR++ Sbjct: 480 GFASAGETHALVSGAPLPAP-APVFPRYV 507 >gi|295396171|ref|ZP_06806353.1| methionine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030] gi|294970959|gb|EFG46852.1| methionine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030] Length = 527 Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust. Identities = 256/513 (49%), Positives = 349/513 (68%), Gaps = 12/513 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++TAIAYPN PHIGHAYE I +D +ARF RL G DV TGTDEHG K+ ++AQ AG Sbjct: 3 FYMTTAIAYPNGAPHIGHAYEYIASDTIARFKRLTGEDVFMLTGTDEHGLKMQQSAQKAG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + D+N+ FR + D L SYD FIRTT+ H+ + LWKK+ + GDIY Y+G Sbjct: 63 ITPRELADKNAAGFRALHDALGSSYDRFIRTTDPDHYTASQDLWKKMDEAGDIYLDTYAG 122 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYES--- 182 WYS+RDEAYY DE DG+ Y A PV+W EEE YFF+LSAY+++LL + +S Sbjct: 123 WYSVRDEAYYAADETEVREDGERYAIATGTPVEWTEEESYFFKLSAYEERLLEWLDSVDD 182 Query: 183 ---HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 HP + P RRNEV+SF+K GLKDLS+SR TFDWG+ +P + +++MYVW+DALTNYL Sbjct: 183 TGRHP--VGPDVRRNEVVSFIKGGLKDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYL 240 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T GY + + WP +LHV+GKDILRFHA+YWPAFL+SA L LPK+V +HGF+ +K Sbjct: 241 TGAGYPNVDSEEFQQRWPCELHVVGKDILRFHAVYWPAFLMSAGLELPKRVHAHGFLFNK 300 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 GEK+SKS+GNV+DP ++++ G+D LRYFL+REI+ G+DG Y + R NADLAN G Sbjct: 301 GEKMSKSVGNVVDPYDLVDAFGLDTLRYFLLREISYGQDGSYSAGAIIGRKNADLANEYG 360 Query: 360 NLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 NLV RS SM+ K+ G++P + T+ D ++L +L+ + + Q +HR + + Sbjct: 361 NLVQRSTSMVAKNLSGVVPEVSEADLTDDDRALLERTDGLLERVTAFVDVQELHRYVEAL 420 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++ E +RYF AQ+PW+LKKT+PDR VLYVT+EV+R+++IL Q +P+ K+ L Sbjct: 421 WRVLEETNRYFSAQEPWKLKKTDPDRMGVVLYVTLEVLRRVSILAQPVMPESTGKVLTQL 480 Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 VA++ R F Q L G L P+FPR+ Sbjct: 481 GVAEDARTFNDFGQWLPAGTELPAPA-PVFPRY 512 >gi|144899823|emb|CAM76687.1| Methionyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1] Length = 518 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 251/510 (49%), Positives = 343/510 (67%), Gaps = 4/510 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ Y++T I Y N +PHIGHAY + DVLARF RLDG DV F TGTDEHGQK+ K+A+ Sbjct: 5 KKTFYVTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGYDVKFLTGTDEHGQKVEKSAE 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG++ + D NS NFR++A L+ S DDFIRTTE RH + + LW K+ GDIY G Sbjct: 65 TAGISPQALADMNSANFRELAARLNCSNDDFIRTTEPRHVASVQALWNKLVQSGDIYLGH 124 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWYS+RDEA+Y +DE+ G +G PV+W++E YFFRLSA+QDKLL +YE + Sbjct: 125 YEGWYSVRDEAFYGEDELVAGPNGGKLAPTGAPVEWVKEPSYFFRLSAWQDKLLQWYEDN 184 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+ + P RRNEV+SFVK GL+DLS+SR +F WGI +P D ++MYVW+DALTNY+T G Sbjct: 185 PDCVAPQSRRNEVMSFVKGGLQDLSVSRTSFKWGIPVPGDADHVMYVWLDALTNYITAVG 244 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y + DG A++WPADLH++GKDI+RFHA+YWPAFL++A + +VF+HG+ ++G+KI Sbjct: 245 YPEQ-DGDYARYWPADLHMVGKDIVRFHAVYWPAFLMAAGIKPATRVFAHGWWTNEGQKI 303 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP+ +IE+ G+D +RYFL+RE+ G DG Y + R+N++LAN GNL Sbjct: 304 SKSVGNVIDPLGLIEKYGLDQVRYFLLREVPFGNDGDYSHRAMVMRMNSELANDYGNLAQ 363 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R +SM+ K+ +P G F + D +L +L ++R+ M QL H L + ++ Sbjct: 364 RVLSMVGKNCGNAVPVHGDFNDDDREMLDAAHGLLHKLRDAMDRQLFHEGLEALWVVIRA 423 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 + Y D Q PW LKKT+P R TVL+V E IR LA+L QAF+P + K+ D L +A + Sbjct: 424 ANGYVDRQAPWALKKTDPARMGTVLWVLAETIRNLALLTQAFMPDSSAKLLDQLAIAADQ 483 Query: 484 RCFQSLDQR--LKPGFMLHKTFDPIFPRFL 511 R LKPG L +FPRF+ Sbjct: 484 RGLAQCGSHHALKPGTPL-PVPQGVFPRFV 512 >gi|119962681|ref|YP_948227.1| methionyl-tRNA synthetase [Arthrobacter aurescens TC1] gi|119949540|gb|ABM08451.1| methionyl-tRNA synthetase [Arthrobacter aurescens TC1] Length = 519 Score = 528 bits (1360), Expect = e-148, Method: Compositional matrix adjust. Identities = 254/510 (49%), Positives = 344/510 (67%), Gaps = 3/510 (0%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E+ YI+TAI+YPN PHIGHAYE+I D +ARF RLDG +V F TGTDEHG K+ ++A Sbjct: 5 EKSPFYITTAISYPNGVPHIGHAYEVIATDAMARFKRLDGHEVFFMTGTDEHGLKMQQSA 64 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + G+T K D+NS F+ M+ L IS+D FIRTT++ H+ + +WKK+ GDIY Sbjct: 65 EKEGLTAKQLADRNSAAFKQMSQDLGISHDRFIRTTDQDHYAASQAIWKKMEANGDIYLS 124 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYE 181 Y GWYS+RDEAYY +D+ DG Y+ + + V W EE YFFRLS YQDKLL+ YE Sbjct: 125 KYEGWYSVRDEAYYVEDDTVVKDDGLRYSKETDTLVTWTAEESYFFRLSNYQDKLLALYE 184 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 PEF P R NEVISFV+ GL+DLS+SR TFDWG+ +P D +++MYVW+DALTNYLT Sbjct: 185 EQPEFGAPQSRFNEVISFVRRGLEDLSISRTTFDWGVPVPGDEKHVMYVWVDALTNYLTG 244 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY D S KFWPAD+HVIGKDI RFHAIYWPAFL+SA L LPK+V HGF+ + G Sbjct: 245 VGYPDIESESFKKFWPADVHVIGKDISRFHAIYWPAFLMSAGLELPKRVMIHGFLTNNGV 304 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+ P + + + G+D RYF +RE+ G DG Y+ + + R+N+DLAN GNL Sbjct: 305 KMSKSLGNVVAPQDFVAQYGLDQCRYFFLREVPFGADGNYNHEAIVGRMNSDLANNFGNL 364 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 RS+SM+ K+ +G +P PG FT D+++L+ +L R Q RAL + +++ Sbjct: 365 AQRSLSMVAKNCEGRVPEPGEFTAEDKALLAQAGELLDTARAAFDKQEFSRALEAIWTVL 424 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 + + YF Q PW L+KT+ +R +TVLYVT+EV+R +AIL Q +P + K+ ++L + Sbjct: 425 GDTNAYFAEQAPWVLRKTDLERMNTVLYVTLEVVRIVAILAQPVMPSSSAKLLEVLGQPE 484 Query: 482 -ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 E+R F ++ + G L P+FPR+ Sbjct: 485 GESRQFAAVATPIVAGTELPAP-APVFPRY 513 >gi|183984451|ref|YP_001852742.1| methionyl-tRNA synthetase MetS [Mycobacterium marinum M] gi|183177777|gb|ACC42887.1| methionyl-tRNA synthetase MetS [Mycobacterium marinum M] Length = 518 Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust. Identities = 246/507 (48%), Positives = 347/507 (68%), Gaps = 5/507 (0%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++TAIAYPNA PH+GHAYE I D +ARF RLDG DV F TGTDEHG K+A+AA A + Sbjct: 5 YVTTAIAYPNAAPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDEHGLKVAQAAAAAEI 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T +NS F+ M + L+IS+D FIRTT+ H++ + +W+++ GDIY YSGW Sbjct: 65 PTAQLARRNSDVFQRMQEALNISFDRFIRTTDADHYEASQEIWRRMDAAGDIYLDSYSGW 124 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 YS+RDE ++ + E + PV W EE+ YFFRLSAY DKLL++YE++P+FI Sbjct: 125 YSVRDERFFVESETQVVDGTRIATETGTPVTWTEEQTYFFRLSAYADKLLAHYEANPDFI 184 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 P RRNEV+SFV GLKDLS+SR +F+WG+ +P P ++MYVW+DALTNYLT GY D Sbjct: 185 APEVRRNEVVSFVSGGLKDLSVSRTSFNWGVPVPGHPDHVMYVWVDALTNYLTGAGYPDT 244 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307 + ++WPADLH+IGKDI+RFHA+YWPAFL+SA + LP++VF+HGF+ ++GEK+SKSL Sbjct: 245 GSEAFLRYWPADLHMIGKDIIRFHAVYWPAFLMSAGIELPRRVFAHGFLHNRGEKMSKSL 304 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN IDP+ +IE GVD +RYFL+RE+ G+DG Y ++ + R+N DLAN +GNL RS+S Sbjct: 305 GNTIDPMGLIETYGVDQVRYFLLREVPFGQDGSYSEEAIINRINTDLANELGNLAQRSLS 364 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 MI K+ G +P PG F+ +D +L++ +L+ +RE+ NQ +H AL + ++ ++Y Sbjct: 365 MIAKNLGGAVPEPGEFSAADRELLAIADGLLERVREHFDNQSMHLALEAIWLMLGHANKY 424 Query: 428 FDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 F Q+PW L+K+ + R T LY T E +R A+L+ +P+ A K+ D+L + Sbjct: 425 FSDQQPWVLRKSESEADQARFRTTLYTTCEAVRIAALLVAPVMPESAAKLLDLLGQGPDQ 484 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510 R F ++ RL PG + +FPR+ Sbjct: 485 RSFNAIGARLVPGTAMPSPTG-VFPRY 510 >gi|163795498|ref|ZP_02189464.1| Methionyl-tRNA synthetase, class Ia [alpha proteobacterium BAL199] gi|159179097|gb|EDP63630.1| Methionyl-tRNA synthetase, class Ia [alpha proteobacterium BAL199] Length = 515 Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust. Identities = 254/506 (50%), Positives = 346/506 (68%), Gaps = 5/506 (0%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I Y N +PHIGHAY + D LARF RLDG DV+F TGTDEHGQK+ AA AGV Sbjct: 6 YVTTPIYYVNDKPHIGHAYTTLACDALARFKRLDGYDVMFLTGTDEHGQKVEAAADAAGV 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F D+ S+NFRD+ V++ S DDFIRTTE RH + LW+++ +KG IY G Y+GW Sbjct: 66 DPQSFTDRVSQNFRDLIGVMNCSTDDFIRTTEPRHVTAVQALWRRLKEKGHIYLGSYAGW 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 YS+RDEA+Y + E+ +G+ PV+W+EE YFF LS +Q+ LL++YE++P+FI Sbjct: 126 YSVRDEAFYVETEL-TTVNGEKRAPSGAPVEWVEEPSYFFDLSKWQEPLLAFYEANPDFI 184 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 P RRNEV+SFV+ GL+DLS+SR +F WG+ +PDD +IMYVW+DALTNY+T GY D Sbjct: 185 APESRRNEVLSFVRGGLRDLSVSRTSFKWGVPVPDDDAHIMYVWLDALTNYITAAGYPDT 244 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307 DG +K WPADLH++GKDILRFHA+YWPAFL+ A L +PK+VF+HG+ +G+K+SKSL Sbjct: 245 -DGQYSKRWPADLHMVGKDILRFHAVYWPAFLMGAGLEVPKRVFAHGWWTVEGQKMSKSL 303 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN IDP +++ G+D RYF++RE+ G DG + + R+N++LAN +GNL R +S Sbjct: 304 GNAIDPAALVDTYGLDQFRYFMLRELPFGNDGDFSHRAMINRMNSELANDLGNLSQRVLS 363 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 M+ K+ G +P PGAF +DE++L +L+ R Q H+AL + +V +RY Sbjct: 364 MVAKNCAGAVPQPGAFAAADEALLGAADALLESQRAAYDTQAFHKALDAIFDVVGRANRY 423 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487 D Q PW L+KT+P R +TVLY VE IR +AILLQ VP ++ D L V + R F Sbjct: 424 VDEQAPWTLRKTDPARMATVLYTLVETIRHVAILLQPIVPGSCERMLDQLAVPADARDFD 483 Query: 488 SL--DQRLKPGFMLHKTFDPIFPRFL 511 L D RL PG L K + +FPR++ Sbjct: 484 RLTPDYRLVPGTPLPKP-EGVFPRWV 508 >gi|118619731|ref|YP_908063.1| methionyl-tRNA synthetase [Mycobacterium ulcerans Agy99] gi|118571841|gb|ABL06592.1| methionyl-tRNA synthetase MetS [Mycobacterium ulcerans Agy99] Length = 518 Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust. Identities = 247/507 (48%), Positives = 347/507 (68%), Gaps = 5/507 (0%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++TAIAYPNA PH+GHAYE I D +ARF RLDG DV F TGTDEHG K+A+AA A + Sbjct: 5 YVTTAIAYPNAAPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDEHGLKVAQAAAAADI 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T +NS F+ M + L+IS+D FIRTT+ H++ + +W+++ GDIY YSGW Sbjct: 65 PTAQLARRNSDVFQRMQEALNISFDRFIRTTDSDHYEASQEIWRRMDAAGDIYLDSYSGW 124 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 YS+RDE ++ + E + NPV W EE+ YFFRLSAY DKLL++YE++P+FI Sbjct: 125 YSVRDERFFVESETQVVDGTRIATETGNPVTWTEEQTYFFRLSAYADKLLAHYEANPDFI 184 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 P RRNEV+SFV GLKDLS+SR +F+WG+ +P P ++MYVW+DALTNYLT GY D Sbjct: 185 APEVRRNEVVSFVSGGLKDLSVSRTSFNWGVPVPGHPDHVMYVWVDALTNYLTGAGYPDT 244 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307 + ++WPAD H+IGKDI+RFHA+YWPAFL+SA + LP++VF+HGF+ ++GEK+SKSL Sbjct: 245 GSEAFLRYWPADQHMIGKDIIRFHAVYWPAFLMSAGIELPRRVFAHGFLHNRGEKMSKSL 304 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN IDP+ +IE GVD +RYFL+RE+ G+DG Y ++ + R+N DLAN +GNL RS+S Sbjct: 305 GNTIDPMGLIETYGVDQVRYFLLREVPFGQDGSYSEEAIINRINTDLANELGNLAQRSLS 364 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 MI K+ G +P PG F+ +D +L++ +L+ +RE+ NQ +H AL + ++ ++Y Sbjct: 365 MIAKNLGGAVPEPGEFSAADRELLAIADGLLERVREHFDNQSMHLALEAIWLMLGHANKY 424 Query: 428 FDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 F Q+PW L+K T+ R T LY T E +R A+L+ +P+ A K+ D+L + Sbjct: 425 FSDQQPWVLRKSESETDQARFRTTLYTTCEAVRIAALLVAPVMPESAAKLLDLLGQRPDQ 484 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510 R F ++ RL PG + +FPR+ Sbjct: 485 RSFNAIGARLVPGTAMPSPTG-VFPRY 510 >gi|83593036|ref|YP_426788.1| methionyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] gi|83575950|gb|ABC22501.1| methionyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] Length = 519 Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust. Identities = 252/508 (49%), Positives = 343/508 (67%), Gaps = 4/508 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + Y++T I Y N +PHIGHAY + DVLARF RLDG DV F TGTDEHGQK+ K+A Sbjct: 5 KPPFYLTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVQKSAT 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+ + F D+ S NFRD+A ++ S D FIRTTE RH + C+ LW + ++G+IY Sbjct: 65 AAGIDPQTFTDRVSANFRDLAAAMNFSNDAFIRTTEPRHKEACKALWTLLVERGEIYLDA 124 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY++RDEA+Y +DE+ ADG PV+W+EE YFFRLS +Q LL Y + Sbjct: 125 YRGWYAVRDEAFYGEDELTTAADGSRLAPTGAPVEWVEEPSYFFRLSKWQQPLLDLYAAR 184 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNEVISFVK GL DLS+SR TF WG+ +P D ++MYVW+DALTNY+T G Sbjct: 185 PDFIAPDSRRNEVISFVKGGLTDLSISRTTFSWGVPVPGDEDHVMYVWLDALTNYITAVG 244 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 + D G A++WPA+LH++GKDILRFH +YWPAFL++A L +P +VF+HG+ ++G+KI Sbjct: 245 FPDQ-TGDYARYWPANLHMVGKDILRFHTVYWPAFLMAAGLEVPGRVFAHGWWTNEGQKI 303 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVIDP +IE G+D +RYFL+RE+ G DG + + R+N +LAN +GNL Sbjct: 304 SKSVGNVIDPRALIETYGLDPVRYFLLREVPFGNDGDFSHRAMINRMNGELANDLGNLAQ 363 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R +SMI K+ G +P PG F+E D+++L+ +L ++R+ M Q H AL + ++ Sbjct: 364 RVLSMIAKNCAGAVPEPGPFSEDDDALLAAAVALLDKVRQAMDRQAFHEALEAIWVVIRA 423 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 + Y D Q PW L+K +P R +TVLYV EVIR++A+L+Q FVP A ++ D L E Sbjct: 424 ANGYVDRQAPWALRKNDPPRMATVLYVLAEVIRRVALLMQPFVPASAARMLDQLGQGPEA 483 Query: 484 RCFQSLDQR--LKPGFMLHKTFDPIFPR 509 R +L R L PG +L K + IFPR Sbjct: 484 RDTTALGDRPLLAPGTVLPKP-EGIFPR 510 >gi|229587041|ref|YP_002845542.1| methionyl-tRNA synthetase [Rickettsia africae ESF-5] gi|228022091|gb|ACP53799.1| Methionyl-tRNA synthetase [Rickettsia africae ESF-5] Length = 508 Score = 522 bits (1344), Expect = e-146, Method: Compositional matrix adjust. Identities = 256/509 (50%), Positives = 352/509 (69%), Gaps = 13/509 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T + Y N PHIGHAY + +DV+ARF RL G DV+F TGTDEHGQK+ KAA N + Sbjct: 6 YITTPVYYVNDIPHIGHAYTSVASDVIARFMRLRGFDVMFLTGTDEHGQKVEKAAINKNI 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F DQ S +FR + + IS DDFIRTTE RH + + W+K+ D G IY+G Y GW Sbjct: 66 DPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLDNGTIYEGFYEGW 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y++RDEA++++ E+ + DG PV+W++E YFF LS +QDKLL +YE+HP+FI Sbjct: 126 YAVRDEAFFDESELTR--DGLAPTGA--PVEWVKEPSYFFNLSKWQDKLLEFYEAHPDFI 181 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++ GYLD Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGYLDE 241 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307 + KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+ ++G+KISKSL Sbjct: 242 -QSNYNKFWPADLHVVGKDILRFHAVYWPAFLMAAEVPLPKTIMAHGWWTNEGQKISKSL 300 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN IDPI++I+E GVD +RYFL+RE+ G DG + + L R+N++L+N IGNL+ R+ S Sbjct: 301 GNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRTTS 360 Query: 368 MILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + K+ D +P T G + E IL S+ +++ M I++ L +I+L E Sbjct: 361 FVYKNNDAKVPLLTQGVIDKIYELPILKTASKFVEQNILLMDKTEINKILENIINLAEEA 420 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + Y D++ PW LKKT+PD+ VLY +EV+R +AI+L F+P ANK+ D L V E R Sbjct: 421 NIYIDSEAPWNLKKTDPDKTLEVLYALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKEER 480 Query: 485 CFQSL--DQRLKPGF-MLHKTFDPIFPRF 510 F+ L D L G +L T IFP+F Sbjct: 481 LFKHLIRDYTLTAGSNILEPTI--IFPKF 507 >gi|157826102|ref|YP_001493822.1| methionyl-tRNA synthetase [Rickettsia akari str. Hartford] gi|157800060|gb|ABV75314.1| methionyl-tRNA synthetase [Rickettsia akari str. Hartford] Length = 512 Score = 521 bits (1343), Expect = e-146, Method: Compositional matrix adjust. Identities = 255/512 (49%), Positives = 354/512 (69%), Gaps = 19/512 (3%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PHIGHAY + +DV+ARF RL GLDV+F TGTDEHGQK+ KAA N + Sbjct: 6 YITTPIYYVNDVPHIGHAYTSVASDVIARFMRLRGLDVIFLTGTDEHGQKVEKAAINKNI 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F DQ S +FR + V+ IS DDFIRTTE RH + + W+K+ D G IY+G Y GW Sbjct: 66 DPQKFTDQTSESFRHLMAVMHISNDDFIRTTENRHKEAVAVFWQKLLDNGTIYEGFYEGW 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y++RDEA++++ E+ +DG PV+W++E YFF LS +QDKLL +YE++P+FI Sbjct: 126 YAVRDEAFFDESEL--TSDGLAPTGA--PVEWVKEPSYFFNLSQWQDKLLEFYEANPDFI 181 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++ GY D Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGYPDE 241 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307 S KFWPADLHV+GKDILRFH +YWPAFL++A +PLPK + +HG+ ++G+KISKSL Sbjct: 242 -QSSYGKFWPADLHVVGKDILRFHTVYWPAFLMAAEIPLPKTIMAHGWWTNEGQKISKSL 300 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN IDPI++I E G+D +RYFL+RE+ G DG + + L R+N++L+N IGNL+ RS + Sbjct: 301 GNTIDPIKLINEFGIDQIRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRSTA 360 Query: 368 MILKDYDGMIPTPGAFTES------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 + K+ +G +P T+S + IL S+ ++ M I++ L +I+L Sbjct: 361 FVYKNNEGKVPL---LTQSVIDKIYELPILKTASKFAEQNILLMDKTEINKILDNIINLA 417 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 E + Y D++ PW LKKT+PD+ VLY +EV+R +AI+LQ F+P ANK+ + L ++ Sbjct: 418 EEANIYIDSEAPWNLKKTDPDKMLEVLYTLLEVLRYIAIMLQPFIPSSANKMLNQLGISK 477 Query: 482 ENRCFQSL--DQRLKPGF-MLHKTFDPIFPRF 510 E R F+ L D L+ G +L T IFPRF Sbjct: 478 EERLFKHLIRDYALRAGSNILEPTI--IFPRF 507 >gi|67458627|ref|YP_246251.1| methionyl-tRNA synthetase [Rickettsia felis URRWXCal2] gi|75536907|sp|Q4UMX2|SYM_RICFE RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|67004160|gb|AAY61086.1| Methionyl-tRNA synthetase [Rickettsia felis URRWXCal2] Length = 512 Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust. Identities = 255/514 (49%), Positives = 356/514 (69%), Gaps = 15/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + YI+T I Y N PHIGHAY + +DV+ARF RL G DV+F TGTDEHGQK+ KAA Sbjct: 2 KNTYYITTPIYYVNDVPHIGHAYTSVASDVIARFIRLCGFDVMFLTGTDEHGQKVEKAAI 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 N + + F D S +FR + +V++IS DDFIRTTE RH + I W+K+ D G IY+G Sbjct: 62 NKNIDPQKFTDHTSESFRHLMNVMNISNDDFIRTTESRHKEAVAIFWQKLLDNGTIYEGF 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY++RDEA++++ E+ +DG PV+W++E YFF LS +QDKLL +YE++ Sbjct: 122 YEGWYAVRDEAFFDESEL--TSDGLAPTGA--PVEWVKEPSYFFNLSKWQDKLLEFYEAN 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL +Y++ G Sbjct: 178 PDFIRPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALASYISALG 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D + KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+ ++G+KI Sbjct: 238 YPDK-QSNYGKFWPADLHVVGKDILRFHAVYWPAFLMAAEIPLPKTIMAHGWWTNEGQKI 296 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGN IDPI++I+E GVD +RYFL+RE+ G DG + + L R+N++L+N IGNL+ Sbjct: 297 SKSLGNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLVTRINSELSNKIGNLLQ 356 Query: 364 RSVSMILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 R+ + + K+ DG +P G + E IL S+ ++ M+ I++ L +I+L Sbjct: 357 RTTAFVYKNNDGKVPLLMQGIIDKIYELPILKTASKFAEQNILLMEKTEINKVLENIINL 416 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 E + Y D++ PW LKKT+P++ S VLY +EV+R +AI+LQ F+P ANK+ D L V Sbjct: 417 SEEANIYIDSEAPWNLKKTDPEKMSEVLYTLLEVLRYIAIMLQPFIPSSANKMLDQLGVN 476 Query: 481 DENRCFQSL--DQRLKPGFMLHKTFDP--IFPRF 510 E R F+ L D L+ G +P IFPRF Sbjct: 477 KEERLFKHLIRDYALRAG---SSILEPAIIFPRF 507 >gi|238651000|ref|YP_002916856.1| methionyl-tRNA synthetase [Rickettsia peacockii str. Rustic] gi|238625098|gb|ACR47804.1| methionyl-tRNA synthetase [Rickettsia peacockii str. Rustic] Length = 508 Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust. Identities = 256/509 (50%), Positives = 352/509 (69%), Gaps = 13/509 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PHIGHAY + +DV+ARF RL G DV+F TGTDEHGQK+ KAA N + Sbjct: 6 YITTPIYYVNDIPHIGHAYTSVASDVIARFMRLRGFDVMFLTGTDEHGQKVEKAAINKNI 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F DQ S +FR + + IS DDFIRTTE RH + + W+K+ D G IY+G Y GW Sbjct: 66 DPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLDNGTIYEGFYEGW 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y++RDEA++++ E+ + DG PV+W++E YFF LS +QDKLL +YE++P+FI Sbjct: 126 YAVRDEAFFDESELTR--DGLAPTGA--PVEWVKEPSYFFNLSKWQDKLLEFYEANPDFI 181 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++ GYLD Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGYLDE 241 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307 + KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+ ++G+KISKSL Sbjct: 242 -QSNYGKFWPADLHVVGKDILRFHAVYWPAFLMAAEVPLPKTIMAHGWWTNEGQKISKSL 300 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN IDPI++I+E GVD +RYFL+RE+ G DG + + L R+N++L+N IGNL+ R+ S Sbjct: 301 GNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRTTS 360 Query: 368 MILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + K+ D +P T G + E IL S+ +++ M I++ L +I+L E Sbjct: 361 FVYKNNDAKVPLLTQGVIDKIYELPILKTASKFVEQNILLMDKTEINKILENIINLAEEA 420 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + Y D++ PW LKKT+PD+ VLY +EV+R +AI+L F+P ANK+ D L V E R Sbjct: 421 NIYIDSEAPWNLKKTDPDKTLEVLYALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKEER 480 Query: 485 CFQSL--DQRLKPGF-MLHKTFDPIFPRF 510 F+ L D L G +L T IFP+F Sbjct: 481 LFKHLIRDYTLTAGSNILEPTI--IFPKF 507 >gi|325963761|ref|YP_004241667.1| methionyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3] gi|323469848|gb|ADX73533.1| methionyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3] Length = 520 Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust. Identities = 254/510 (49%), Positives = 339/510 (66%), Gaps = 3/510 (0%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E+ YI+TAI YPN PHIGHAYE I D +ARF RLDG DV+F TGTDEHG KIA+ A Sbjct: 5 EKTPFYITTAITYPNGVPHIGHAYEYIATDAMARFKRLDGYDVMFLTGTDEHGMKIAQTA 64 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + G+T K VD+N+ ++ L I+YD FIRTT+ H+ + +WKK+ GDIY Sbjct: 65 EKEGITPKELVDRNAEVYKAAHAALGITYDRFIRTTDADHYAASQAIWKKMEANGDIYLS 124 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYE 181 Y GWYS+RDEA+Y +D+ DG Y+ + + V W EE YFFRLSAYQ+KLL+ YE Sbjct: 125 KYEGWYSVRDEAFYGEDDTVVKDDGVRYSKETDTEVTWTAEESYFFRLSAYQEKLLALYE 184 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 + PEF P R NEVISFVK GL+DLS+SR TFDWG+ +P + +++MYVW+DALTNYLT Sbjct: 185 AQPEFGAPQYRFNEVISFVKRGLEDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLTG 244 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY D K+WPAD+H+IGKDI RFHAIYWPAFL+SA L LPK+V HGF+ + G Sbjct: 245 VGYPDVDSEKFRKYWPADVHIIGKDISRFHAIYWPAFLMSAGLELPKRVMIHGFLHNNGV 304 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+ P + + + G+D +RYF +RE+ G DG Y+ D + R+NADLAN GNL Sbjct: 305 KMSKSLGNVVAPADFVAQYGLDQVRYFFLREVPFGADGSYNHDAIVGRMNADLANNFGNL 364 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 RS+SM+ K+ +G +P PG FT +D +IL+ + +LQ +R Q RAL V ++ Sbjct: 365 AQRSLSMVAKNCEGRVPVPGEFTAADNAILAQANGLLQTVRAVFDKQEFSRALEAVWGVL 424 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 + + YF Q PW L+KT+ R +TVLYVT+EV+R +AIL Q +P + L + Sbjct: 425 GDTNAYFAEQAPWVLRKTDVGRMNTVLYVTLEVLRIVAILAQPVMPAATASLLAALGQPE 484 Query: 482 -ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 E R F ++ + G L P+FP++ Sbjct: 485 GEARQFAAIATPIAAGTGLPAP-SPVFPKY 513 >gi|157828900|ref|YP_001495142.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933624|ref|YP_001650413.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. Iowa] gi|157801381|gb|ABV76634.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908711|gb|ABY73007.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. Iowa] Length = 508 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 256/509 (50%), Positives = 351/509 (68%), Gaps = 13/509 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PHIGHAY + +DV+ARF RL G DV+F TGTDEHGQK+ KAA N + Sbjct: 6 YITTPIYYVNDIPHIGHAYTSVASDVIARFMRLRGFDVMFLTGTDEHGQKVEKAAINKNI 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F DQ S +FR + + IS DDFIRTTE RH + + W+K+ D G IY+G Y GW Sbjct: 66 DPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLDNGTIYEGFYEGW 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y++RDEA++++ E+ + DG PV+W++E YFF LS +QDKLL +YE++P+FI Sbjct: 126 YAVRDEAFFDESELTR--DGLAPTGA--PVEWVKEPSYFFNLSKWQDKLLEFYEANPDFI 181 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++ GYLD Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGYLDE 241 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307 + KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+ + G+KISKSL Sbjct: 242 -QSNYGKFWPADLHVVGKDILRFHAVYWPAFLMAAEVPLPKTIMAHGWWTNDGQKISKSL 300 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN IDPI++I+E GVD +RYFL+RE+ G DG + + L R+N++L+N IGNL+ R+ S Sbjct: 301 GNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRTTS 360 Query: 368 MILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + K+ D +P T G + E IL S+ +++ M I++ L +I+L E Sbjct: 361 FVYKNNDAKVPLLTQGVIDKIYELPILKTASKCVEQNILLMDKTEINKILENIINLAEEA 420 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + Y D++ PW LKKT+PD+ VLY +EV+R +AI+L F+P ANK+ D L V E R Sbjct: 421 NIYIDSEAPWNLKKTDPDKTLEVLYALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKEER 480 Query: 485 CFQSL--DQRLKPGF-MLHKTFDPIFPRF 510 F+ L D L G +L T IFP+F Sbjct: 481 LFKHLIRDYTLTAGSNILEPTI--IFPKF 507 >gi|15840435|ref|NP_335472.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551] gi|31792198|ref|NP_854691.1| methionyl-tRNA synthetase [Mycobacterium bovis AF2122/97] gi|121636936|ref|YP_977159.1| methionyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148822217|ref|YP_001286971.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis F11] gi|215402823|ref|ZP_03415004.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987] gi|215410610|ref|ZP_03419418.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] gi|215426286|ref|ZP_03424205.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T92] gi|215429868|ref|ZP_03427787.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|215445157|ref|ZP_03431909.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T85] gi|218752679|ref|ZP_03531475.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503] gi|219556874|ref|ZP_03535950.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T17] gi|224989408|ref|YP_002644095.1| methionyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|253799963|ref|YP_003032964.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN 1435] gi|254231302|ref|ZP_04924629.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis C] gi|254363923|ref|ZP_04979969.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis str. Haarlem] gi|254549993|ref|ZP_05140440.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185918|ref|ZP_05763392.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A] gi|260200036|ref|ZP_05767527.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|260204225|ref|ZP_05771716.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis K85] gi|289442428|ref|ZP_06432172.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289446589|ref|ZP_06436333.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis CPHL_A] gi|289555210|ref|ZP_06444420.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN 605] gi|289568984|ref|ZP_06449211.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T17] gi|289573647|ref|ZP_06453874.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis K85] gi|289744743|ref|ZP_06504121.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis 02_1987] gi|289749536|ref|ZP_06508914.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T92] gi|289753068|ref|ZP_06512446.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis EAS054] gi|289757090|ref|ZP_06516468.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T85] gi|289761143|ref|ZP_06520521.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis GM 1503] gi|294995197|ref|ZP_06800888.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 210] gi|297633534|ref|ZP_06951314.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207] gi|297730519|ref|ZP_06959637.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506] gi|298524503|ref|ZP_07011912.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] gi|306781942|ref|ZP_07420279.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu002] gi|306783703|ref|ZP_07422025.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu003] gi|306788058|ref|ZP_07426380.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu004] gi|306792391|ref|ZP_07430693.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu005] gi|306796794|ref|ZP_07435096.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu006] gi|306802680|ref|ZP_07439348.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu008] gi|306806859|ref|ZP_07443527.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu007] gi|306967060|ref|ZP_07479721.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu009] gi|313657848|ref|ZP_07814728.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475] gi|38258294|sp|P59952|SYM_MYCBO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|13880605|gb|AAK45286.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551] gi|31617786|emb|CAD93895.1| PROBABLE METHIONYL-TRNA SYNTHETASE METS (MetRS) (Methionine--tRNA ligase) [Mycobacterium bovis AF2122/97] gi|121492583|emb|CAL71051.1| Probable methionyl-trna synthetase metS [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600361|gb|EAY59371.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis C] gi|134149437|gb|EBA41482.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis str. Haarlem] gi|148720744|gb|ABR05369.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis F11] gi|224772521|dbj|BAH25327.1| methionyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|253321466|gb|ACT26069.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN 1435] gi|289415347|gb|EFD12587.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289419547|gb|EFD16748.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis CPHL_A] gi|289439842|gb|EFD22335.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN 605] gi|289538078|gb|EFD42656.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis K85] gi|289542738|gb|EFD46386.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T17] gi|289685271|gb|EFD52759.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis 02_1987] gi|289690123|gb|EFD57552.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T92] gi|289693655|gb|EFD61084.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis EAS054] gi|289708649|gb|EFD72665.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis GM 1503] gi|289712654|gb|EFD76666.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T85] gi|298494297|gb|EFI29591.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] gi|308325333|gb|EFP14184.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu002] gi|308331486|gb|EFP20337.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu003] gi|308335292|gb|EFP24143.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu004] gi|308339100|gb|EFP27951.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu005] gi|308342772|gb|EFP31623.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu006] gi|308346681|gb|EFP35532.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu007] gi|308350596|gb|EFP39447.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu008] gi|308355229|gb|EFP44080.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu009] gi|323720508|gb|EGB29590.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis CDC1551A] gi|326904766|gb|EGE51699.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis W-148] gi|328459706|gb|AEB05129.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN 4207] Length = 519 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 252/508 (49%), Positives = 354/508 (69%), Gaps = 7/508 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++TAIAYPNA PH+GHAYE I D +ARF RLDG DV F TGTDEHG K+A+AA AGV Sbjct: 5 YVTTAIAYPNAAPHVGHAYEYIATDAIARFKRLDGYDVRFLTGTDEHGLKVAQAAAAAGV 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T +NS F+ M + L+IS+D FIRTT+ HH+ + LW+++S GDIY YSGW Sbjct: 65 PTAALARRNSDVFQRMQEALNISFDRFIRTTDADHHEASKELWRRMSAAGDIYLDNYSGW 124 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 YS+RDE ++ + E + DG + PV W EE+ YFFRLSAY DKLL++Y ++P+F Sbjct: 125 YSVRDERFFVESET-QLVDGTRLTVETGTPVTWTEEQTYFFRLSAYTDKLLAHYHANPDF 183 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P RRNEVISFV GL DLS+SR +FDWG+++P+ P ++MYVW+DALTNYLT G+ D Sbjct: 184 IAPETRRNEVISFVSGGLDDLSISRTSFDWGVQVPEHPDHVMYVWVDALTNYLTGAGFPD 243 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 ++WPADLH+IGKDI+RFHA+YWPAFL+SA + LP+++F+HGF+ ++GEK+SKS Sbjct: 244 TDSELFRRYWPADLHMIGKDIIRFHAVYWPAFLMSAGIELPRRIFAHGFLHNRGEKMSKS 303 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 +GN++DP+ + E +GVD +RYFL+RE+ G+DG Y + + R+N DLAN +GNL RS+ Sbjct: 304 VGNIVDPVALAEALGVDQVRYFLLREVPFGQDGSYSDEAIVTRINTDLANELGNLAQRSL 363 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 SM+ K+ DG +P PG F ++D ++L+ +L+ +R + Q +H AL + ++ + ++ Sbjct: 364 SMVAKNLDGRVPNPGEFADADAALLATADGLLERVRGHFDAQAMHLALEAIWLMLGDANK 423 Query: 427 YFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 YF Q+PW L+K+ + R T LYVT EV+R A+L+Q +P+ A KI D+L A Sbjct: 424 YFSVQQPWVLRKSESEADQARFRTTLYVTCEVVRIAALLIQPVMPESAGKILDLLGQAPN 483 Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 R F ++ RL PG L +FPR+ Sbjct: 484 QRSFAAVGVRLTPGTALPPPTG-VFPRY 510 >gi|108801230|ref|YP_641427.1| methionyl-tRNA synthetase [Mycobacterium sp. MCS] gi|119870381|ref|YP_940333.1| methionyl-tRNA synthetase [Mycobacterium sp. KMS] gi|126437210|ref|YP_001072901.1| methionyl-tRNA synthetase [Mycobacterium sp. JLS] gi|108771649|gb|ABG10371.1| methionyl-tRNA synthetase [Mycobacterium sp. MCS] gi|119696470|gb|ABL93543.1| methionyl-tRNA synthetase [Mycobacterium sp. KMS] gi|126237010|gb|ABO00411.1| methionyl-tRNA synthetase [Mycobacterium sp. JLS] Length = 515 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 242/511 (47%), Positives = 343/511 (67%), Gaps = 6/511 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+TAIAYPN PH+GHAYE I D +ARF RLDG DV + TGTD HGQK+A+ A Sbjct: 3 QPFYITTAIAYPNGDPHVGHAYEYIATDAIARFKRLDGYDVRYLTGTDVHGQKMAETATA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV +NS F+ + + L+IS+D FIRT++ H+ +W++++ GDIY Y Sbjct: 63 LGVPVADLARRNSDVFQRLQEKLNISFDRFIRTSDTDHYRASEDIWQRMNAAGDIYLDAY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESH 183 SGWYS+RDE ++ + E DG + P+ W EE+ YFF+LSAY D+LL++YE+H Sbjct: 123 SGWYSVRDERFFTEGETTLREDGVRIATETGAPLTWTEEQTYFFKLSAYTDRLLAHYEAH 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 PEFI P RRNE++SFV GL+DLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT G Sbjct: 183 PEFIQPDARRNEIVSFVSGGLRDLSISRTTFDWGVPVPDHPDHVMYVWVDALTNYLTGVG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D ++WPADLH+IGKDI+RFH +YWPAFL+SA L LP+KVF+HG++L++GEK+ Sbjct: 243 YPDTSSEEFQRYWPADLHMIGKDIIRFHTVYWPAFLMSAGLELPRKVFAHGWLLNRGEKM 302 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNV+DP+ +++ G+D +RYF +RE+ G+DG Y +D + R+NADLAN +GNL Sbjct: 303 SKSIGNVVDPVNLVDTFGLDQVRYFFLREVPFGQDGSYSEDAIIGRINADLANELGNLAQ 362 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SM+ K+ +P PG FT D ++L ++ +R + Q +H AL + S++ Sbjct: 363 RSLSMVAKNLGSAVPEPGEFTAEDLALLDAADALMDRVRRHFDEQAMHLALEAIWSVLGA 422 Query: 424 VDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +RYF AQ+PW L+K+ + R TVLY T+E +R A+L Q +P + D++ Sbjct: 423 ANRYFSAQEPWVLRKSEAVHDQVRFRTVLYTTLETVRIAALLSQPVMPDSTATLLDLVGQ 482 Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + R F ++ RL PG L K +FPR+ Sbjct: 483 PADQRTFAAVSTRLTPGTALPKPVG-VFPRY 512 >gi|15892969|ref|NP_360683.1| methionyl-tRNA synthetase [Rickettsia conorii str. Malish 7] gi|25009381|sp|Q92GS6|SYM_RICCN RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|15620165|gb|AAL03584.1| methionyl-tRNA synthetase [Rickettsia conorii str. Malish 7] Length = 508 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 256/509 (50%), Positives = 351/509 (68%), Gaps = 13/509 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PHIGHAY + +DV+ARF RL G DV+F TGTDEHGQK+ KAA N + Sbjct: 6 YITTPIYYVNDIPHIGHAYTSVASDVIARFMRLRGFDVMFLTGTDEHGQKVEKAAINKNI 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F DQ S +FR + + IS DDFIRTTE RH + W+K+ D G IY+G Y GW Sbjct: 66 DPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKKAVAVFWQKLLDNGTIYEGFYEGW 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y++RDEA++++ E+ + DG PV+W++E YFF LS +QDKLL +YE++P+FI Sbjct: 126 YAVRDEAFFDESELTR--DGLAPTGA--PVEWVKEPSYFFNLSKWQDKLLEFYEANPDFI 181 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++ GYLD Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGYLDE 241 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307 + KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+ ++G+KISKSL Sbjct: 242 -QSNYNKFWPADLHVVGKDILRFHAVYWPAFLMAAEVPLPKTIMAHGWWTNEGQKISKSL 300 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN IDPI++I+E GVD +RYFL+RE+ G DG + + L R+N++L+N IGNL+ R+ S Sbjct: 301 GNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRTTS 360 Query: 368 MILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + K+ D +P T G + E IL S+ +++ M I++ L +I+L E Sbjct: 361 FVYKNNDAKVPLLTQGVIDKIYELPILKTASKFVEQNILLMDKTEINKILENIINLAEEA 420 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + Y D++ PW LKKT+PD+ VLY +EV+R +AI+L F+P ANK+ D L V E R Sbjct: 421 NIYIDSEAPWNLKKTDPDKMLEVLYALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKEER 480 Query: 485 CFQSL--DQRLKPGF-MLHKTFDPIFPRF 510 F+ L D L G +L T IFP+F Sbjct: 481 LFKHLIRDYTLTAGSNILEPTI--IFPKF 507 >gi|34581336|ref|ZP_00142816.1| methionyl-tRNA synthetase [Rickettsia sibirica 246] gi|28262721|gb|EAA26225.1| methionyl-tRNA synthetase [Rickettsia sibirica 246] Length = 508 Score = 518 bits (1334), Expect = e-145, Method: Compositional matrix adjust. Identities = 255/509 (50%), Positives = 352/509 (69%), Gaps = 13/509 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PHIGHAY + +DV+ARF RL G DV+F TGTDEHGQK+ KAA N + Sbjct: 6 YITTPIYYVNDIPHIGHAYTSVASDVIARFMRLRGFDVMFLTGTDEHGQKVEKAAINKNI 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F DQ S +FR + + IS DDFIRTTE RH + + W+K+ D G IY+G Y GW Sbjct: 66 DPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLDNGTIYEGFYEGW 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y+++DEA++++ E+ + DG PV+W++E YFF LS +QDKLL +YE++P+FI Sbjct: 126 YAVQDEAFFDESELTR--DGLAPTGA--PVEWVKEPSYFFNLSKWQDKLLEFYEANPDFI 181 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++ GYLD Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGYLDE 241 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307 + KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+ ++G+KISKSL Sbjct: 242 -QSNYNKFWPADLHVVGKDILRFHAVYWPAFLMAAEVPLPKTIMAHGWWTNEGQKISKSL 300 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN IDPI++I+E GVD +RYFL+RE+ G DG + + L R+N++L+N IGNL+ R+ S Sbjct: 301 GNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRTTS 360 Query: 368 MILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + K+ D +P T G + E IL S+V+++ M I++ L +I+L E Sbjct: 361 FVYKNNDAKVPLLTQGVIDKIYELPILKTASKVVEQNILLMDKTEINKILENIINLAEEA 420 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + Y D++ PW LKK +PD+ VLY +EV+R +AI+L F+P ANK+ D L V E R Sbjct: 421 NIYIDSEAPWNLKKIDPDKTLEVLYALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKEER 480 Query: 485 CFQSL--DQRLKPGF-MLHKTFDPIFPRF 510 F+ L D L G +L T IFP+F Sbjct: 481 LFKHLIRDYTLTAGSNILEPTI--IFPKF 507 >gi|332185017|ref|ZP_08386766.1| methionyl-tRNA synthetase [Sphingomonas sp. S17] gi|332014741|gb|EGI56797.1| methionyl-tRNA synthetase [Sphingomonas sp. S17] Length = 518 Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust. Identities = 248/512 (48%), Positives = 335/512 (65%), Gaps = 10/512 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+TAI YPN +PHIGHAYEM+ ADV+ARF R G DVLF TGTDEHG K+A+AA+ Sbjct: 3 DPFYITTAIHYPNGRPHIGHAYEMVAADVIARFQRQAGRDVLFQTGTDEHGLKMAQAARA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++T+ F D+ S F MAD LDISYD FIRT + H+ + +WK + KGD+Y Y Sbjct: 63 RGISTREFADEMSSYFHVMADRLDISYDRFIRTVDADHYAASQAIWKAMQAKGDLYLDRY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWYS+RDEA+Y++ E+ G DG + Q PV+W EE +FFRLS YQ LL Y +P Sbjct: 123 EGWYSVRDEAFYDEAELTLGEDGTKLSPQGTPVEWTAEETWFFRLSKYQQPLLDLYRDNP 182 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RRNEV+ FV+ GL DLS+SR +FDWG+ +PD P ++MYVW+DALTNYLT TGY Sbjct: 183 DFIRPESRRNEVMRFVEGGLSDLSVSRTSFDWGVPVPDSPGHVMYVWVDALTNYLTGTGY 242 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 N D A+FWPA+LH+IGKDI+RFH +YWPAFL+SA+LPLP+ VF HGF+LH+GEK+S Sbjct: 243 -PNKDSELARFWPANLHLIGKDIVRFHTVYWPAFLMSADLPLPQSVFGHGFLLHRGEKMS 301 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS+GNV+DP+ + + GVDALRYF +RE++ G+DG Y + + RVNA+LAN GNL R Sbjct: 302 KSVGNVVDPMGLADAFGVDALRYFFLREVSFGQDGSYSAEAIVTRVNAELANSFGNLAQR 361 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 ++S I K+ G +P G +D ++ ++ + ++ + + + V Sbjct: 362 TLSFIAKNLGGALPEAGRSDPTDAMLIEEVVVACAGLKTAFDDLMLSQGIEAWMRGVYAC 421 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 ++Y D Q PW L+KT+P+R VL V IR LAI + P+ A ++ D L E R Sbjct: 422 NQYIDVQAPWSLRKTDPERMHAVLGTLVRAIRMLAIAILPVTPRGAGQVLDTL--GAEER 479 Query: 485 CFQSLD------QRLKPGFMLHKTFDPIFPRF 510 ++D +R G L P FPR Sbjct: 480 DHAAIDDDGWYARRAATGVPLSPP-TPAFPRL 510 >gi|163839798|ref|YP_001624203.1| methionyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] gi|162953274|gb|ABY22789.1| methionyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] Length = 529 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 257/510 (50%), Positives = 355/510 (69%), Gaps = 5/510 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + Y++TAI YPN PHIGHAYE + AD LARF RLDG DV + +GTDEHG K+ +AA+ Sbjct: 7 KRPYYLTTAITYPNGVPHIGHAYEYVSADALARFKRLDGFDVFYMSGTDEHGIKVQQAAE 66 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT VD+NS R + D+++ SYD FIRTTE H+ + LW+++ GDIY Sbjct: 67 KEGVTPLELVDRNSAAIRAVHDLVESSYDRFIRTTEPEHYLASQELWRRMEANGDIYLDK 126 Query: 124 YSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y+GWYS+RDEAYY D++ ADG +Y V W EEE YFFRLS YQ+KLL+ YE+ Sbjct: 127 YTGWYSVRDEAYYTDEQTELRADGIRYAIETETEVTWTEEESYFFRLSNYQEKLLALYEA 186 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEF P R NEVISFVKSGL+DLS+SR +F+WG+ +P + +++MYVW+DALTNYLT Sbjct: 187 QPEFAAPQYRFNEVISFVKSGLQDLSISRTSFNWGVPVPGNDKHVMYVWVDALTNYLTGA 246 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 G+ D S+ K+WPAD+H+IGKDI RFHAI+WP FL+SA LPLPK+V HGF+ + G K Sbjct: 247 GFPDE-SSSQWKYWPADVHIIGKDISRFHAIFWPGFLMSAGLPLPKRVMIHGFLFNNGVK 305 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+ P + + GVDA+R+F +RE++ G+DG Y + + R N+DLAN +GNL Sbjct: 306 MSKSFGNVVAPADWVAAYGVDAVRFFFLREVSYGQDGNYSHEAIISRKNSDLANNLGNLA 365 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 RS+SM+ K+ DG++PTPG F+ +D++IL+ +L R + + Q HRAL + +++ Sbjct: 366 QRSLSMVAKNCDGVVPTPGEFSSADQAILAKAQALLAANRASYEVQEFHRALEAIWAVLG 425 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV--A 480 + + YF Q PW L+KT+P+R +TVLYVT+EV+R +A+L+Q +P A K+ D+L V A Sbjct: 426 DTNAYFADQAPWVLRKTDPERMATVLYVTLEVLRIVALLIQPVMPGSAAKLLDVLGVSAA 485 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + R F +++ L G L PIFPR+ Sbjct: 486 EGARDFTAVETPLVAGTALPAP-SPIFPRY 514 >gi|15608147|ref|NP_215523.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv] gi|148660789|ref|YP_001282312.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|167968135|ref|ZP_02550412.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|306775143|ref|ZP_07413480.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu001] gi|306971250|ref|ZP_07483911.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu010] gi|307078978|ref|ZP_07488148.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu011] gi|307083539|ref|ZP_07492652.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu012] gi|3122902|sp|O05593|SYM_MYCTU RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|2052144|emb|CAB08142.1| PROBABLE METHIONYL-TRNA SYNTHETASE METS (MetRS) (Methionine--tRNA ligase) [Mycobacterium tuberculosis H37Rv] gi|148504941|gb|ABQ72750.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|308216293|gb|EFO75692.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu001] gi|308359184|gb|EFP48035.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu010] gi|308363118|gb|EFP51969.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu011] gi|308366750|gb|EFP55601.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu012] Length = 519 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 251/508 (49%), Positives = 353/508 (69%), Gaps = 7/508 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++TAIAYPNA PH+GHAYE I D +ARF RLD DV F TGTDEHG K+A+AA AGV Sbjct: 5 YVTTAIAYPNAAPHVGHAYEYIATDAIARFKRLDRYDVRFLTGTDEHGLKVAQAAAAAGV 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T +NS F+ M + L+IS+D FIRTT+ HH+ + LW+++S GDIY YSGW Sbjct: 65 PTAALARRNSDVFQRMQEALNISFDRFIRTTDADHHEASKELWRRMSAAGDIYLDNYSGW 124 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 YS+RDE ++ + E + DG + PV W EE+ YFFRLSAY DKLL++Y ++P+F Sbjct: 125 YSVRDERFFVESET-QLVDGTRLTVETGTPVTWTEEQTYFFRLSAYTDKLLAHYHANPDF 183 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P RRNEVISFV GL DLS+SR +FDWG+++P+ P ++MYVW+DALTNYLT G+ D Sbjct: 184 IAPETRRNEVISFVSGGLDDLSISRTSFDWGVQVPEHPDHVMYVWVDALTNYLTGAGFPD 243 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 ++WPADLH+IGKDI+RFHA+YWPAFL+SA + LP+++F+HGF+ ++GEK+SKS Sbjct: 244 TDSELFRRYWPADLHMIGKDIIRFHAVYWPAFLMSAGIELPRRIFAHGFLHNRGEKMSKS 303 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 +GN++DP+ + E +GVD +RYFL+RE+ G+DG Y + + R+N DLAN +GNL RS+ Sbjct: 304 VGNIVDPVALAEALGVDQVRYFLLREVPFGQDGSYSDEAIVTRINTDLANELGNLAQRSL 363 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 SM+ K+ DG +P PG F ++D ++L+ +L+ +R + Q +H AL + ++ + ++ Sbjct: 364 SMVAKNLDGRVPNPGEFADADAALLATADGLLERVRGHFDAQAMHLALEAIWLMLGDANK 423 Query: 427 YFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 YF Q+PW L+K+ + R T LYVT EV+R A+L+Q +P+ A KI D+L A Sbjct: 424 YFSVQQPWVLRKSESEADQARFRTTLYVTCEVVRIAALLIQPVMPESAGKILDLLGQAPN 483 Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 R F ++ RL PG L +FPR+ Sbjct: 484 QRSFAAVGVRLTPGTALPPPTG-VFPRY 510 >gi|157964833|ref|YP_001499657.1| methionyl-tRNA synthetase [Rickettsia massiliae MTU5] gi|157844609|gb|ABV85110.1| Methionyl-tRNA synthetase [Rickettsia massiliae MTU5] Length = 508 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 253/509 (49%), Positives = 348/509 (68%), Gaps = 13/509 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PHIGHAY + +DV+ARF RL G DV+F TGTDEHGQK+ KAA N + Sbjct: 6 YITTPIYYVNDVPHIGHAYTSVASDVIARFMRLRGFDVMFLTGTDEHGQKVEKAAINKNI 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F DQ S FR + + IS DDFIRTTE RH + + W+K+ + G IY+G Y GW Sbjct: 66 DPQQFTDQTSEIFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLENGTIYEGFYEGW 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y++RDEA++++ E+ +DG PV+W++E YFF LS +QDKLL +YE++P+FI Sbjct: 126 YAVRDEAFFDESEL--TSDGLAPTGA--PVEWVKEPSYFFNLSKWQDKLLEFYEANPDFI 181 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 PI RRNEVISFVKSGLKDLS+SR TF+WGIK+ ++ ++++YVW+DAL NY++ GY D Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVSNNEKHVIYVWLDALANYISALGYPDK 241 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307 + KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK + HG+ ++G+KISKSL Sbjct: 242 -QSNYGKFWPADLHVVGKDILRFHAVYWPAFLMAAEVPLPKTIMVHGWWTNEGQKISKSL 300 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN IDPI++I+E GVD +RYFL+RE+ G DG + + L R+N++L+N IGNL+ R+ S Sbjct: 301 GNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRTTS 360 Query: 368 MILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + K+ D +P T G + E IL S+ +++ M I++ L +I+L E Sbjct: 361 FVYKNNDAKVPLLTQGVIDKIYELPILKTASKFVEQNILLMDKTEINKILENIINLAEEA 420 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + Y D++ PW LKKT+PD+ VLY +EV+R +AI+L F+P ANK+ D L V E R Sbjct: 421 NIYIDSEAPWNLKKTDPDKTLEVLYALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKEER 480 Query: 485 CFQSL--DQRLKPGF-MLHKTFDPIFPRF 510 F+ L D L G +L T IFP+F Sbjct: 481 LFKHLIRDYTLTAGSNILEPTI--IFPKF 507 >gi|329113410|ref|ZP_08242191.1| Methionyl-tRNA synthetase [Acetobacter pomorum DM001] gi|326697235|gb|EGE48895.1| Methionyl-tRNA synthetase [Acetobacter pomorum DM001] Length = 512 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 238/506 (47%), Positives = 340/506 (67%), Gaps = 2/506 (0%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + Y++T I Y N PHIGHAY I ADV+ARFHRL G +V F TGTDEHGQK+ +AAQ Sbjct: 4 RFYVTTPIYYVNGAPHIGHAYTSIAADVMARFHRLAGDEVFFLTGTDEHGQKVEQAAQAN 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ K F D+ S +FR+MAD ++ISYDDFIRTTE RH + + LWKK++D G IY G Y Sbjct: 64 GIDAKSFADKVSADFRNMADAMNISYDDFIRTTEPRHITSTQALWKKVADNGAIYLGAYE 123 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY+LRDE +Y +DE+ G DG+ PV+W++E YFF+LS YQD+LL YE++P+ Sbjct: 124 GWYALRDECFYGEDELVPGPDGKKVAPTGAPVEWVKEPSYFFKLSEYQDRLLELYENNPD 183 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 F+ P RNE++SFVK GL+DLS+SR +F WGI +P D +++MYVW DAL NYL+ GY Sbjct: 184 FLGPHGARNEIVSFVKQGLRDLSISRTSFKWGIPVPGDDKHVMYVWFDALANYLSALGYP 243 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D + FWPA+LH++GKDI RFHA+YWPAFL++A + LP+KVF++G+ +G+K+SK Sbjct: 244 DT-SAPRMAFWPANLHLVGKDIARFHAVYWPAFLMAAGIELPRKVFANGWWTIEGQKMSK 302 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGNV+DP ++++E G+DA+R+FL+RE+ G D + L R N +LAN +GNL R+ Sbjct: 303 SLGNVVDPRDLVKEFGLDAVRFFLLREVPFGGDSDLSRKALIMRNNVELANDLGNLAQRT 362 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +S++ ++ G++P TE D +L + ++ ++ + AL V ++ + Sbjct: 363 LSLVARNCGGVLPERRTLTEEDTHLLGQVMVLPDLLKSQIERCALTDALEDVWKVIRACN 422 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 Y D Q PW L+KT+P+R VL V V+ +R +A +LQ F+P+ ++ D L V E R Sbjct: 423 AYIDHQAPWALRKTDPERMKDVLRVLVDALRGIATMLQPFMPQSMERMLDQLSVTAEERS 482 Query: 486 FQSLDQRLKPGFMLHKTFDPIFPRFL 511 F +L+ L G L IFPR++ Sbjct: 483 FAALETPLPGGRQLPAP-QGIFPRYV 507 >gi|296284128|ref|ZP_06862126.1| methionyl-tRNA synthetase [Citromicrobium bathyomarinum JL354] Length = 520 Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust. Identities = 250/517 (48%), Positives = 345/517 (66%), Gaps = 19/517 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E YI+TAI YPN +PHIGHAYE + ADV+ARF RL G DV F TGTDEHG K+A+ A+ Sbjct: 3 EPYYITTAIHYPNGKPHIGHAYETVAADVIARFQRLKGRDVRFQTGTDEHGLKMARKAEE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G T + D+ S FRD+ D L+ISYD FIRTTE HH + LW+++ GD+Y Y Sbjct: 63 QGKTPRELADEMSGYFRDLFDRLNISYDRFIRTTEAGHHTASQALWRRMEANGDLYLDRY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWYS+RDEA+Y++ E+ +G G+ + Q PV+W EE +FFRLS YQDKLL Y S P Sbjct: 123 EGWYSVRDEAFYDEKELVEGEGGEKLSPQGTPVEWTVEESWFFRLSKYQDKLLDLYASQP 182 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RRNEV+ FV+ GL+DLS+SR +FDWG+++P ++MYVW+DALTNY++ GY Sbjct: 183 DFIQPDSRRNEVMRFVEGGLRDLSISRTSFDWGVQVPGAEDHVMYVWVDALTNYISGLGY 242 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + +G+ K+WPADLH+IGKDI+RFH +YWPAFL+SA + LP++V+ HGF+L++G+K S Sbjct: 243 PE--EGADWKYWPADLHLIGKDIIRFHTVYWPAFLMSAGVDLPRQVYGHGFLLNRGQKES 300 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSLGNV DP + E+ GVDALRYFL+REIA G+DG Y + + R NA+LAN GNL R Sbjct: 301 KSLGNVTDPNVLAEQFGVDALRYFLMREIAFGQDGSYSPEAIVTRANAELANSFGNLAQR 360 Query: 365 SVSMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVIS--- 419 ++SMI K+ DG + GA++ + D+++L+ V RE + Q A + I Sbjct: 361 TLSMIAKNLDGEL---GAYSPAGDDKALLTT---VQDACREGLPKQFEKLAFSTGIEAWM 414 Query: 420 -LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 V ++Y D Q PW LKKT+P+R TVL +R LAI +Q +P+ A+ + +L Sbjct: 415 KAVYACNQYVDEQAPWALKKTDPERMRTVLQTLFIALRDLAIAIQPVIPEKADHLLTMLG 474 Query: 479 VADENRCFQSLDQRLKPGFMLHKTF-----DPIFPRF 510 +A++ R F+ L G ++ + P+FPR Sbjct: 475 IAEDARTFEDLADEGWYGALVRTGYRVAPPSPLFPRL 511 >gi|258542241|ref|YP_003187674.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256633319|dbj|BAH99294.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256636378|dbj|BAI02347.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03] gi|256639431|dbj|BAI05393.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07] gi|256642487|dbj|BAI08442.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22] gi|256645542|dbj|BAI11490.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26] gi|256648595|dbj|BAI14536.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32] gi|256651648|dbj|BAI17582.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654639|dbj|BAI20566.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12] Length = 512 Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust. Identities = 238/506 (47%), Positives = 340/506 (67%), Gaps = 2/506 (0%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + Y++T I Y N PHIGHAY I ADV+ARFHRL G +V F TGTDEHGQK+ +AAQ Sbjct: 4 RFYVTTPIYYVNGAPHIGHAYTSIAADVMARFHRLAGDEVFFLTGTDEHGQKVEQAAQAN 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G K F D+ S +FR+MAD ++ISYDDFIRTTE RH + + LWKK++D G IY G Y Sbjct: 64 GTDAKSFADKVSADFRNMADAMNISYDDFIRTTEPRHITSTQALWKKVADNGAIYLGAYE 123 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY+LRDE +Y +DE+ G DG+ PV+W++E YFF+LS YQD+LL YE++P+ Sbjct: 124 GWYALRDECFYGEDELVPGPDGKKVAPTGAPVEWVKEPSYFFKLSEYQDRLLELYENNPD 183 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 F+ P RNE++SFVK GL+DLS+SR +F WGI +P D +++MYVW DAL NYL+ GY Sbjct: 184 FLGPHGARNEIVSFVKQGLRDLSISRTSFKWGIPVPGDDKHVMYVWFDALANYLSALGYP 243 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D + + FWPA+LH++GKDI RFHA+YWPAFL++A + LP+KVF++G+ +G+K+SK Sbjct: 244 DT-NAPRMAFWPANLHLVGKDIARFHAVYWPAFLMAAGIELPRKVFANGWWTIEGQKMSK 302 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGNV+DP ++++E G+DA+R+FL+RE+ G D + L R N +LAN +GNL R+ Sbjct: 303 SLGNVVDPRDLVKEFGLDAVRFFLLREVPFGGDSDLSRKALIMRNNVELANDLGNLAQRT 362 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +S++ ++ G++P TE D +L + ++ ++ + AL V ++ + Sbjct: 363 LSLVARNCGGILPERRELTEEDTHLLGQVMVLPDLLKSQIERCALTDALEDVWKVIRACN 422 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 Y D Q PW L+KT+P+R VL V V+ +R +A +LQ F+P+ ++ D L V E R Sbjct: 423 AYIDHQAPWALRKTDPERMKDVLRVLVDALRGIATMLQPFMPQSMERMLDQLAVTAEERS 482 Query: 486 FQSLDQRLKPGFMLHKTFDPIFPRFL 511 F +L+ L G L IFPR++ Sbjct: 483 FAALEMPLPGGRQLPAP-QGIFPRYV 507 >gi|157827625|ref|YP_001496689.1| methionyl-tRNA synthetase [Rickettsia bellii OSU 85-389] gi|157802929|gb|ABV79652.1| methionyl-tRNA synthetase [Rickettsia bellii OSU 85-389] Length = 509 Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust. Identities = 251/513 (48%), Positives = 347/513 (67%), Gaps = 21/513 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PHIGHAY + +DV+ARF RL G +V+F TGTDEHGQK+ KAA + + Sbjct: 6 YITTPIYYVNDVPHIGHAYTSVASDVIARFMRLSGHEVMFLTGTDEHGQKVEKAAIDKNI 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F DQ S++FR + + IS DDFIRTTE+RH I W+K+ D G IY+G Y GW Sbjct: 66 DPQKFTDQTSQSFRHLMTAMHISNDDFIRTTEERHKKAVAIFWQKLLDNGSIYEGFYEGW 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y++RDEA+Y++ E+ A V+W++E YFF LS +QDKLL +YE++P+FI Sbjct: 126 YAVRDEAFYDESELTADKLAPTGAA----VEWVKEPSYFFNLSKWQDKLLEFYEANPDFI 181 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P+D ++++YVW+DAL NY++ GY D Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNDNKHVIYVWLDALANYISALGYPDQ 241 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307 + + KFWPA+L V+GKDILRFHAIYWPAFL++A +PLPK + +HG+ ++G+KISKSL Sbjct: 242 -NSNYGKFWPANLQVVGKDILRFHAIYWPAFLMAAEIPLPKTIMAHGWWTNEGQKISKSL 300 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN IDPI++IEE GVD +RYFL+REI G DG + + L R+N++L+N IGNL+ R+ S Sbjct: 301 GNTIDPIKLIEEFGVDQVRYFLMREITFGADGNFARSNLITRINSELSNKIGNLLQRTTS 360 Query: 368 MILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIREN---MQNQLIHRALAQVISLVS 422 + K+ DG +P T A + E L + + ++N M+ I++ L +I+L Sbjct: 361 FVYKNNDGKVPAITQDAINKIYE--LPLLKTAINSAKQNILLMEKTEINKILDNIINLAE 418 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 E + Y D++ PW LKKT+P++ VLY +E +R +A++LQAF+P A K+ D L V E Sbjct: 419 EANIYIDSEAPWNLKKTDPEKMLEVLYALLETLRYIAVMLQAFMPSSAGKMLDQLGVNTE 478 Query: 483 NRCFQSLDQRLKPGFMLHKTFD-----PIFPRF 510 R F+ L F L D +FPRF Sbjct: 479 ERLFKHLSLE----FALTSASDILEPVIVFPRF 507 >gi|91205053|ref|YP_537408.1| methionyl-tRNA synthetase [Rickettsia bellii RML369-C] gi|123388147|sp|Q1RJZ5|SYM_RICBR RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|91068597|gb|ABE04319.1| Methionyl-tRNA synthetase [Rickettsia bellii RML369-C] Length = 509 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 250/513 (48%), Positives = 347/513 (67%), Gaps = 21/513 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PHIGHAY + +DV+ARF RL G +V+F TGTDEHGQK+ KAA + + Sbjct: 6 YITTPIYYVNDVPHIGHAYTSVASDVIARFMRLSGHEVMFLTGTDEHGQKVEKAAIDKNI 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F DQ S++FR + + IS DDFIRTTE+RH I W+K+ D G IY+G Y GW Sbjct: 66 DPQKFTDQTSQSFRHLMTAMHISNDDFIRTTEERHKKAVAIFWQKLLDNGSIYEGFYEGW 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y++RDEA+Y++ E+ A V+W++E YFF LS +QDKLL +YE++P+FI Sbjct: 126 YAVRDEAFYDESELTADKLAPTGAA----VEWVKEPSYFFNLSKWQDKLLEFYEANPDFI 181 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P+D ++++YVW+DAL NY++ GY D Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNDNKHVIYVWLDALANYISALGYPDQ 241 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307 + + KFWPA+L V+GKDILRFHA+YWPAFL++A +PLPK + +HG+ ++G+KISKSL Sbjct: 242 -NSNYGKFWPANLQVVGKDILRFHAVYWPAFLMAAEIPLPKTIMAHGWWTNEGQKISKSL 300 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN IDPI++IEE GVD +RYFL+REI G DG + + L R+N++L+N IGNL+ R+ S Sbjct: 301 GNTIDPIKLIEEFGVDQVRYFLMREITFGADGNFARSNLITRINSELSNKIGNLLQRTTS 360 Query: 368 MILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIREN---MQNQLIHRALAQVISLVS 422 + K+ DG +P T A + E L + + ++N M+ I++ L +I+L Sbjct: 361 FVYKNNDGKVPAITQDAINKIYE--LPLLKTAINSAKQNILLMEKTEINKILDNIINLAE 418 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 E + Y D++ PW LKKT+P++ VLY +E +R +A++LQAF+P A K+ D L V E Sbjct: 419 EANIYIDSEAPWNLKKTDPEKMLEVLYALLETLRYIAVMLQAFMPSSAGKMLDQLGVNTE 478 Query: 483 NRCFQSLDQRLKPGFMLHKTFD-----PIFPRF 510 R F+ L F L D +FPRF Sbjct: 479 ERLFKHLSLE----FALTSASDILEPVIVFPRF 507 >gi|239948424|ref|ZP_04700177.1| methionyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] gi|241563440|ref|XP_002401705.1| methionyl-tRNA synthetase, putative [Ixodes scapularis] gi|215501897|gb|EEC11391.1| methionyl-tRNA synthetase, putative [Ixodes scapularis] gi|239922700|gb|EER22724.1| methionyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] Length = 508 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 250/509 (49%), Positives = 347/509 (68%), Gaps = 13/509 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PHIGHAY + +DV+ARF RL DV+F TGTDEHGQK+ KAA N + Sbjct: 6 YITTPIYYVNDVPHIGHAYTSVASDVIARFMRLRSFDVMFLTGTDEHGQKVEKAAINKNI 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F DQ S +FR + + IS DDFIRTTE RH + + W+K+ D G IY+G Y GW Sbjct: 66 DPQKFTDQTSESFRHLMTAMHISNDDFIRTTENRHKEAVAVFWQKLLDNGTIYEGFYEGW 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y++RDEA+Y++ E+ +G PV+W++E YFF LS +QDKLL +YE++P+FI Sbjct: 126 YAVRDEAFYDESELTEGKLA----PMGAPVEWVKEPSYFFNLSKWQDKLLEFYEANPDFI 181 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++ Y D Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISVLDYPDE 241 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307 + KFWPA+LHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+ ++G+KISKSL Sbjct: 242 -QSNYGKFWPANLHVVGKDILRFHAVYWPAFLMAAEIPLPKTIMAHGWWTNEGQKISKSL 300 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN IDPI++I+E GVD +RYFL+RE+ G DG + + L R+N++L+N IGNL+ R+ + Sbjct: 301 GNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRTTA 360 Query: 368 MILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + K+ DG +P T + E IL S+ ++ M I++ L ++I+L E Sbjct: 361 FVYKNNDGKVPLLTQDVIDKIYELPILKNASKFAEQNILLMDKTEINKILEKIINLAEEA 420 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + Y D++ PW LKK +PD+ VLY +EV+R +AI+L F+P ANK+ D L V E R Sbjct: 421 NIYIDSEAPWNLKKIDPDKMLEVLYTLLEVLRYIAIMLLPFIPSSANKMLDQLGVNKEER 480 Query: 485 CFQSL--DQRLKPGF-MLHKTFDPIFPRF 510 F+ L D L G +L T IFP+F Sbjct: 481 LFKHLVRDYALTAGSNILEPTI--IFPKF 507 >gi|330994631|ref|ZP_08318554.1| Methionyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] gi|329758272|gb|EGG74793.1| Methionyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] Length = 512 Score = 508 bits (1308), Expect = e-142, Method: Compositional matrix adjust. Identities = 244/508 (48%), Positives = 335/508 (65%), Gaps = 6/508 (1%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + Y++T I Y N PHIGHAY + ADV+ARF RL G DV F TGTDEHGQK+ +AAQ A Sbjct: 4 RYYVTTPIYYVNGAPHIGHAYTSVAADVIARFKRLAGFDVFFLTGTDEHGQKVEQAAQAA 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T F D+ + +FRDM D + ISYDDFIRTTE RH + LWKK+ + G IY Y Sbjct: 64 GMTPIAFADRVAADFRDMYDTMAISYDDFIRTTEPRHVQGAQALWKKLEENGHIYLDAYE 123 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY+ RDE +Y ++E+ G DG+ V+W++E YFF LS + D+LL YE+ P Sbjct: 124 GWYATRDECFYGEEELIDGPDGKKVAPTGAAVEWVKEPSYFFDLSRFGDRLLELYETRPG 183 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RRNEVISFVK GL++LS+SR +F WGI +P DP+++MYVW+DAL NYL+ GY Sbjct: 184 FIEPASRRNEVISFVKQGLRNLSVSRTSFSWGIPVPGDPKHVMYVWVDALANYLSAVGY- 242 Query: 246 DNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 PD A+ FWPA+LH++GKDILRFHAIYWPA L++A LPLP +VFSHG+ +G+K+ Sbjct: 243 --PDAGAARWGFWPANLHLVGKDILRFHAIYWPALLMAAGLPLPDRVFSHGWWTIEGQKM 300 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNV+DP +++ E G+D +R+FL+RE+ G D + + R+N +LAN +GNL Sbjct: 301 SKSLGNVVDPRDLVTEFGLDPIRFFLMREMPFGGDSDLSRRAIISRMNVELANDLGNLAQ 360 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R++S I ++ DG +P G T D +L+ S ++Q + E + Q + AL +V L+ Sbjct: 361 RTLSQIARNCDGKLPPQGTHTPEDTKLLAPASLLVQIMHEQIDRQALTDALEEVWKLIRA 420 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 + Y D Q PW+LKKT+ R VL V + +R +A +LQ ++P +++ L VA+ Sbjct: 421 CNAYIDHQAPWKLKKTDAARMGDVLRVLADALRIIATVLQPYMPGSMDRMLTQLGVAEGE 480 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F SLD L G L IFPR++ Sbjct: 481 RTFASLDVPLPAGRALPAP-QGIFPRYV 507 >gi|148553410|ref|YP_001260992.1| methionyl-tRNA synthetase [Sphingomonas wittichii RW1] gi|148498600|gb|ABQ66854.1| methionyl-tRNA synthetase [Sphingomonas wittichii RW1] Length = 523 Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust. Identities = 243/513 (47%), Positives = 338/513 (65%), Gaps = 10/513 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E YI+TAI+YPN +PHIGHAYE I AD +ARF R G DV F TGTDEHG K+A+AA+ Sbjct: 7 EPYYITTAISYPNGRPHIGHAYEAIAADAIARFQRSMGRDVRFQTGTDEHGLKMAQAARA 66 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 +T + D+ S F++M + L+IS D FIRT++ H+ + +W+ + GD+Y Y Sbjct: 67 RDITPRALADEMSSYFKEMCETLNISCDRFIRTSDADHYAASQAIWQAMEANGDLYLDRY 126 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWYS+RDEA+Y++ E+ G GQ + Q PV+W +EE +FFRLS YQ+ LL Y P Sbjct: 127 EGWYSVRDEAFYDEKELTDGEGGQKLSPQGTPVEWTKEESWFFRLSRYQEPLLQLYRDQP 186 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RRNE++SFV GL DLS+SR +FDWG+ +P P ++MYVW+DALTNYLT GY Sbjct: 187 DFIRPETRRNEIVSFVSGGLSDLSVSRTSFDWGVPVPGSPGHVMYVWVDALTNYLTGIGY 246 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D D + ++WPA+LH+IGKDI+RFH +YWPAFL+SA +PLPK+VF HGF+L+KGEK+S Sbjct: 247 PDR-DAALGRYWPANLHLIGKDIVRFHTVYWPAFLMSAKIPLPKQVFGHGFLLNKGEKMS 305 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS+GNV+DP+ + E GVD LRYFL+RE++ G+DG Y + + R NA+LAN GNL R Sbjct: 306 KSVGNVVDPMTMAERYGVDQLRYFLLREVSFGQDGSYGHEAIVNRANAELANSFGNLAQR 365 Query: 365 SVSMILKDYDGMIPTPGAFTESDESIL-SVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 ++SMI K+ DG +P TE D +++ +V + L E + + + V Sbjct: 366 TLSMIFKNLDGELPALDR-TEDDAALVRAVATACLDETPRAFEQLAFSIGIEAWMKAVFA 424 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 ++Y DAQ PW L+KT+P+R TVL VIR LAI + +P A K+ D + VA + Sbjct: 425 CNQYVDAQAPWTLRKTDPERMKTVLGTLFAVIRDLAITILPIIPDSAGKLLDQMGVAADA 484 Query: 484 RCFQSL------DQRLKPGFMLHKTFDPIFPRF 510 R F ++ D+ G+ + + P+FPR Sbjct: 485 RDFAAIESQAWYDELRASGYRVAQPV-PLFPRL 516 >gi|58038507|ref|YP_190471.1| methionyl-tRNA synthetase [Gluconobacter oxydans 621H] gi|58000921|gb|AAW59815.1| Methionyl-tRNA synthetase [Gluconobacter oxydans 621H] Length = 516 Score = 505 bits (1300), Expect = e-141, Method: Compositional matrix adjust. Identities = 235/506 (46%), Positives = 341/506 (67%), Gaps = 2/506 (0%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I+T I Y N PHIGHAY I ADVLARFHRL+G +VLF +GTDEHGQK+ + A Sbjct: 9 RFIITTPIFYVNGAPHIGHAYTSIAADVLARFHRLNGEEVLFVSGTDEHGQKVEQTAVAK 68 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ + + D+ S +FR M + IS D+FIRTTE+RH + LW+K++ G IY G Y Sbjct: 69 GMDPQAYADEVSASFRQMQKDMAISTDEFIRTTEERHKGAAKALWEKVAANGHIYLGAYE 128 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWYS RDEA+ +DE+ K DG + PV+ ++E YFFRLS +QD+LL YE +P+ Sbjct: 129 GWYSTRDEAFIGEDELVKKPDGTFVAPSGAPVERVKEPSYFFRLSDFQDRLLKLYEDNPD 188 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P+ R E+ SFV+ GL+DLS+SR +F WG+ +P+DP ++MYVW DAL NYLT GY Sbjct: 189 FIGPVGPRREIESFVRQGLRDLSVSRTSFKWGVPVPNDPDHVMYVWFDALANYLTAVGYP 248 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D D +AKFWPAD+H++GK+I RFH +YWPAFL++A + LPK VF+HG+ +GEK+SK Sbjct: 249 DLND-PRAKFWPADVHIVGKEIARFHCVYWPAFLMAAGIDLPKSVFAHGWWTVEGEKMSK 307 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGNV+DP + +E G+DALR+FL+RE+ G D + + + R N +LAN +GNL R+ Sbjct: 308 SLGNVLDPKALADEFGLDALRFFLMREVPFGGDSNFSRRSMITRTNVELANDLGNLCQRT 367 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +S + ++ G++P G TE D+++L++ + + + E ++ + I AL +V ++ + Sbjct: 368 LSQVARNLGGVLPERGTLTEDDQAMLAMVTLLPTIMSEQIERKAITDALEEVWKVIRAAN 427 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 Y D Q PW LKKT+P+R + VL V V++IR +A +LQ ++P +++ L V D+ R Sbjct: 428 SYIDRQAPWALKKTDPERMADVLRVLVDMIRGIATMLQPYMPNTMDRMLTQLGVQDDERT 487 Query: 486 FQSLDQRLKPGFMLHKTFDPIFPRFL 511 F +L+ L G L K + +FPRF+ Sbjct: 488 FAALETPLPAGRTLPKP-EGLFPRFV 512 >gi|224009692|ref|XP_002293804.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335] gi|220970476|gb|EED88813.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335] Length = 579 Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust. Identities = 245/507 (48%), Positives = 348/507 (68%), Gaps = 10/507 (1%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+T I Y N +PHIGHAY + DV+AR+ RL G DV F +GTDEHGQK+ A+NA + Sbjct: 66 ITTPIYYVNDKPHIGHAYTSLACDVIARYMRLSGRDVFFLSGTDEHGQKVETTAKNANME 125 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 F D S +F+++ +L+IS D+FIRTT++ H + LW + +KG IY G Y GWY Sbjct: 126 PLAFCDMVSASFKELLTLLNISNDEFIRTTDEDHKKAVQHLWNVLVEKGAIYLGSYEGWY 185 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME-EEGYFFRLSAYQDKLLSYYESHPEFI 187 S+RDE YYN+ E+ DG+ V+W++ E+ YFF+LS YQD+LL+YYE+HP+FI Sbjct: 186 SVRDECYYNESEL---VDGKAPTGAE--VEWVKKEDSYFFKLSEYQDELLNYYEAHPDFI 240 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 P R+NEV+SFVK GLKDLS+SR TFDWG+ +P D ++MYVWIDALTNY++ GY + Sbjct: 241 APESRKNEVVSFVKGGLKDLSISRTTFDWGVPVPGDDDHVMYVWIDALTNYMSALGYPNT 300 Query: 248 -PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 P G+ KFWPA LHV+GKDILRFHA+YWPAFLL+A +PLPK++F+HG+ GEKISKS Sbjct: 301 EPGGNFDKFWPASLHVVGKDILRFHAVYWPAFLLAAGIPLPKRIFAHGWWTKDGEKISKS 360 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 LGNVIDP+E+I+ GVD R+FL+ E+ G DG + + + +VNA+L+N +GNL R + Sbjct: 361 LGNVIDPVELIDTYGVDPTRFFLMSEVVFGNDGDFSDEKMIYKVNANLSNELGNLNQRIM 420 Query: 367 SMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +++ K+ + +P G TE+D+ +L+ + + E + +Q IH+ + +IS+V + + Sbjct: 421 TLVFKNCNKAVPAEIGPLTEADKQLLAKAASLRGITSEAIASQSIHKYVEHMISMVWDAN 480 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 +Y D Q PW LKKT+ +R +TVLYV +EV+R +AIL Q +P +N I D L V ++ R Sbjct: 481 KYIDVQAPWVLKKTDTERMNTVLYVLMEVMRHVAILYQPLMPTSSNVILDQLGVPEDERE 540 Query: 486 FQSLDQRLKPGFMLHKTFDP--IFPRF 510 F+ LD+ + + P +FPRF Sbjct: 541 FEHLDKEECKIMLGREVGKPHAVFPRF 567 >gi|15604526|ref|NP_221044.1| methionyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E] gi|6226189|sp|Q9ZCP0|SYM_RICPR RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|3861220|emb|CAA15120.1| METHIONYL-TRNA SYNTHETASE (metS) [Rickettsia prowazekii] gi|292572314|gb|ADE30229.1| Methionyl-tRNA synthetase [Rickettsia prowazekii Rp22] Length = 508 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 249/514 (48%), Positives = 342/514 (66%), Gaps = 15/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + YI+T I Y N HIGHAY + +DV+ARF R G DV+F TGTDEHGQK+ KAA Sbjct: 2 KNTYYITTPIYYVNDVAHIGHAYTSVASDVIARFMRFCGKDVMFLTGTDEHGQKVEKAAI 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 N + + F D+ S+NFRD+ ++IS DDFIRTTE RH + WKK+ D G IY+G Sbjct: 62 NQNIDPQTFTDKTSQNFRDLMVAMNISNDDFIRTTENRHKKAVAVFWKKLLDNGAIYEGF 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWYS+RDEA+Y++ E+ + PV+W++E YFF L+ +QDKLL +YE + Sbjct: 122 YEGWYSVRDEAFYDESEI----NEDKLAPTGAPVEWVKEPSYFFNLAKWQDKLLEFYELN 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+F+ PI RRNEVISF+KSGLKDLS+SR TF WGIK+P++ ++++YVW+DAL NY++ G Sbjct: 178 PDFVRPISRRNEVISFIKSGLKDLSISRTTFHWGIKVPNNRKHVIYVWLDALVNYISALG 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D + AKFWPA+L ++GKDILRFHA+YWPAFL++A +PLPK + HG+ ++G+KI Sbjct: 238 YPDK-QSNYAKFWPANLQIVGKDILRFHAVYWPAFLMAAEIPLPKAIMVHGWWTNEGQKI 296 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGN IDPI +I+E GVD +RYFL+RE+ G D + ++ L R+N++L+N IGNL+ Sbjct: 297 SKSLGNTIDPITLIDEFGVDQVRYFLMREVIFGADANFARNNLITRINSELSNKIGNLLH 356 Query: 364 RSVSMILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 R VS + K+ D +P G + E IL + QE M I++ L +I+L Sbjct: 357 RIVSFVYKNNDAKVPLIKSGVIDKIYELPILKTAIKFAQENILLMDKTEINKILENIINL 416 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 + + Y + PW LK T+PD+ VLY +EV+R +AI+LQ FVP ANK+ D L V+ Sbjct: 417 AEDANIYITNEAPWNLKTTDPDKMLEVLYSLLEVLRYIAIMLQPFVPNSANKMLDQLGVS 476 Query: 481 DENRCFQSL--DQRLKPGFMLHKTFDP--IFPRF 510 E R F+ L D LK G +P IFP+F Sbjct: 477 KEERLFKHLVRDHALKAG---SNILEPSIIFPKF 507 >gi|307292797|ref|ZP_07572643.1| methionyl-tRNA synthetase [Sphingobium chlorophenolicum L-1] gi|306880863|gb|EFN12079.1| methionyl-tRNA synthetase [Sphingobium chlorophenolicum L-1] Length = 520 Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust. Identities = 243/510 (47%), Positives = 327/510 (64%), Gaps = 11/510 (2%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+TAI+YPN +PHIGHAYE+I D +ARF R+ DV F TGTDEHG K+A+ A+N G+ Sbjct: 7 ITTAISYPNGRPHIGHAYEVIATDAIARFQRMMDRDVFFQTGTDEHGLKMAQTARNRGIE 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D+ S F+ M D L+ISYD FIRT+E HH + +W+ + GD+Y G Y GWY Sbjct: 67 PRELADEMSSYFKAMNDGLNISYDRFIRTSEPDHHSASQAIWQAMEANGDLYLGRYEGWY 126 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 S+RDEA+Y++ E+ +G GQ + Q PV+W EE +FFRLSAYQ KLL Y P+FI Sbjct: 127 SVRDEAFYDEKELTEGEGGQKLSPQGTPVEWTVEESWFFRLSAYQQKLLDLYTGQPDFIQ 186 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P RRNE++ FV+ GL DLS+SR +FDWG+K+P ++MYVW+DALTNYLT GY D+ Sbjct: 187 PDSRRNEIMRFVEGGLSDLSVSRTSFDWGVKVPGSDGHVMYVWVDALTNYLTGCGYPDDL 246 Query: 249 DGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + A++W HVIGKDI+RFH +YWPAFL+SA LPLPK+VF HGF+L++GEK+SK Sbjct: 247 E-RMARYWAEGGDITHVIGKDIVRFHTVYWPAFLMSAKLPLPKQVFGHGFLLNRGEKMSK 305 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGNV DP+E+ E GVD LRYFL+ E+ G DG Y + + R N+DLAN GNL R+ Sbjct: 306 SLGNVADPMELAERFGVDQLRYFLLSEVTFGNDGSYSAEAIVTRSNSDLANSFGNLAQRT 365 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +S I K+ +G +P P A E D +L + Q + M + A+ + V + Sbjct: 366 LSFIAKNLEGRLPEP-APQEVDGDLLKTVAEAAQTFQAAMVDLAPSTAIEAWMRAVFACN 424 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 Y DAQ PW L+KT+P R VL E I LAI++Q +P A+ + D + VA E R Sbjct: 425 AYIDAQAPWTLRKTDPARMEAVLATLYEAIAHLAIIVQPVIPASASALLDQMGVAGEGRN 484 Query: 486 FQSLDQRL-----KPGFMLHKTFDPIFPRF 510 + ++ GF+L P+FPR Sbjct: 485 YAAIGSGWYAALRASGFVLGAP-KPLFPRL 513 >gi|85708668|ref|ZP_01039734.1| methionine--tRNA ligase [Erythrobacter sp. NAP1] gi|85690202|gb|EAQ30205.1| methionine--tRNA ligase [Erythrobacter sp. NAP1] Length = 525 Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust. Identities = 251/515 (48%), Positives = 333/515 (64%), Gaps = 11/515 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E YI+TAI YPN +PHIGHAYE I ADV+ARF RL G +V F TGTDEHG K+A+ A Sbjct: 5 ENAPYYITTAINYPNGRPHIGHAYEGIAADVIARFQRLKGREVRFQTGTDEHGLKMARKA 64 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + G T + D+ S FR+M + L+I +D FIRT E HH + +W+++ GD+Y Sbjct: 65 EEQGRTPRDLADEMSGYFREMDEALNIDFDRFIRTVEPEHHRASQAIWERMEAAGDLYLD 124 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWYS+RDEAYY++ E+ +G Q + Q PV+W EE +FFRLS Y+ LL ++ Sbjct: 125 RYEGWYSVRDEAYYDESELVEGEGEQKLSPQGTPVEWTVEESWFFRLSKYEKPLLDLLKT 184 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P F+ P RRNE+I+FV+ GL+DLS+SR +FDWG+K+P ++MYVW+DALTNYLT Sbjct: 185 -PGFLEPASRRNEMIAFVEQGLRDLSVSRTSFDWGVKVPGSDNHVMYVWVDALTNYLTGL 243 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 G+ D KFWPA LH+IGKDI+RFH IYWPAFL+SANLP+PKKVF HGF+L++G+K Sbjct: 244 GFPDE-TPEMEKFWPASLHLIGKDIVRFHTIYWPAFLMSANLPVPKKVFGHGFLLNRGQK 302 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 SKSLGNV DP+E+ E+ GVD LRYFL+RE+A G+DG Y + + R NA+LAN GNL Sbjct: 303 ESKSLGNVTDPLELAEQFGVDNLRYFLMREVAFGQDGSYSSEAIVTRTNAELANSFGNLA 362 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV-ISLV 421 R++SMI K+ DG++ P E D ++L+ QL +V I V Sbjct: 363 QRTLSMIAKNMDGVL-EPFELAEVDTALLAAVKNACATDLPREFEQLAFSVGIEVWIKAV 421 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++Y D Q PW LKKT+P+R VL IR LAI +Q VP+ A+ + D L V + Sbjct: 422 YACNQYVDEQAPWTLKKTDPERMKAVLQTLFCAIRDLAIAIQPIVPEKASAVLDQLGVPE 481 Query: 482 ENRCFQSL------DQRLKPGFMLHKTFDPIFPRF 510 R F+ L D+ K G ++ K PIFPR Sbjct: 482 NERQFEQLHDRSWFDRLAKSGHVVGKP-TPIFPRL 515 >gi|296116331|ref|ZP_06834947.1| methionyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295977150|gb|EFG83912.1| methionyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 512 Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust. Identities = 238/506 (47%), Positives = 331/506 (65%), Gaps = 2/506 (0%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + Y++T I Y N PHIGHAY + ADV+ARF RL G DV F TGTDEHGQK+ +AA A Sbjct: 4 RYYVTTPIYYVNGAPHIGHAYTSVAADVIARFKRLAGFDVFFLTGTDEHGQKVEQAAHTA 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT ++ + +FRDM D + ISYDDFIRTT+ RH + LWKK+ + G IY G Y Sbjct: 64 GVTPIELANRVAADFRDMYDKMAISYDDFIRTTQPRHAEGAAALWKKLEENGHIYLGAYE 123 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY+LRDE +Y ++E+ ADG PV+W++E YFFRLS +QD+LL YE+HP Sbjct: 124 GWYALRDECFYQEEELVIAADGTRTAPTGAPVEWVKEPSYFFRLSKFQDRLLELYETHPG 183 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 F+ P RRNEV SFV+ GL+DLS+SR +F+WGI +P DP+++MYVW+DAL NYL+ GY Sbjct: 184 FVEPAGRRNEVRSFVRGGLRDLSISRTSFNWGIPVPGDPKHVMYVWVDALANYLSAVGYP 243 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D + FWPA+LH++GKDILRFHAIYWPA L+ A LPLP++VFSHG+ G+K+SK Sbjct: 244 DE-GAPRWDFWPANLHLVGKDILRFHAIYWPALLMGAGLPLPERVFSHGWWTIAGQKMSK 302 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGNV+DP +++ E G+D +R+FL+RE+ G D ++ + R+N +LAN +GNL R+ Sbjct: 303 SLGNVLDPRDLVAEFGLDPVRFFLMREMPFGGDSDINRKAIITRMNVELANDLGNLAQRT 362 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +S I ++ G++P T D ++L+ S + + + Q + AL +V ++ + Sbjct: 363 LSQIARNCAGLLPERATPTAEDTALLAQASLLPDLMHGQIDRQALTDALEEVWKVIRASN 422 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 Y D Q PW LKKT+P R + VL V +V+R +A +LQ ++P + + L V R Sbjct: 423 AYIDHQAPWALKKTDPQRMADVLRVLADVLRTIATVLQPYMPGSMDTMLTQLGVEATERD 482 Query: 486 FQSLDQRLKPGFMLHKTFDPIFPRFL 511 F +L L G L IFPRF+ Sbjct: 483 FAALGTPLPAGRPLPAP-KGIFPRFV 507 >gi|157804069|ref|YP_001492618.1| methionyl-tRNA synthetase [Rickettsia canadensis str. McKiel] gi|157785332|gb|ABV73833.1| methionyl-tRNA synthetase [Rickettsia canadensis str. McKiel] Length = 510 Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust. Identities = 248/508 (48%), Positives = 342/508 (67%), Gaps = 13/508 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PHIGHAY +++DV+ARF RL G +V+ TGTDEHGQK+ KAA N + Sbjct: 6 YITTPIYYVNNVPHIGHAYTSVVSDVIARFMRLCGFEVILLTGTDEHGQKVEKAAINKNI 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F DQ S NFR + + IS DDFIRTTE RH + + W+K+ D G IYKG Y GW Sbjct: 66 DPQQFTDQISENFRHLMTSMHISNDDFIRTTENRHKEAVAVFWQKLLDNGTIYKGFYEGW 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y++RDEA+Y++ E+ +DG V+W++E YFF LS +QDKLL YE +P+FI Sbjct: 126 YAVRDEAFYDESEL--TSDGLAPTGAS--VEWVKEPSYFFNLSKWQDKLLELYELNPDFI 181 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 PI RRNEVI+FVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++ GY D Sbjct: 182 RPISRRNEVINFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGYPDE 241 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307 + KFWPA LHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+ ++G+KISKSL Sbjct: 242 -QSNYGKFWPAALHVVGKDILRFHAVYWPAFLMAAKIPLPKTIMAHGWWTNEGQKISKSL 300 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN IDPI++I+E GVD +RYFL+RE+ G DG + + L R+N++L+N IGNL+ R+ + Sbjct: 301 GNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRTTA 360 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN---MQNQLIHRALAQVISLVSEV 424 + K+ DG +P L + ++ +N M+ +++ L +I+L E Sbjct: 361 FVYKNNDGKVPLLTQSVIDKIYTLPILKAAIKCAEQNILLMEKTEVNKILENIINLAEEA 420 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + Y D + PW LKKT+ D+ VLY +EV+R +AI+LQ FVP ANK+ D L V + R Sbjct: 421 NIYIDNKAPWNLKKTDHDKMLEVLYALLEVLRYIAIMLQPFVPTSANKMLDQLGVNKKER 480 Query: 485 CFQSL--DQRLKPG-FMLHKTFDPIFPR 509 F+ L D L G +L T IFPR Sbjct: 481 LFKHLVRDYALTVGAAILEPTI--IFPR 506 >gi|94496391|ref|ZP_01302968.1| methionyl-tRNA synthetase [Sphingomonas sp. SKA58] gi|94424137|gb|EAT09161.1| methionyl-tRNA synthetase [Sphingomonas sp. SKA58] Length = 520 Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust. Identities = 238/510 (46%), Positives = 332/510 (65%), Gaps = 11/510 (2%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+TAI+YPN +PHIGHAYE+I D +ARF R+ G DV F TGTDEHG K+A+ A+ G+ Sbjct: 7 ITTAISYPNGRPHIGHAYEVIATDAIARFQRMMGRDVFFQTGTDEHGLKMAQTARARGIE 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D+ + F+ M + L+IS+D FIRT+E HH + +W+ + GD+Y G Y GWY Sbjct: 67 PRALADEMAGYFKVMNEALNISHDRFIRTSEPDHHRASQAIWRAMEANGDLYLGRYEGWY 126 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 S+RDEA+Y++ E+ +G G + Q+ PV+W EE +FFRLSAYQDKLL+ YES P+FI Sbjct: 127 SVRDEAFYDEKELIEGEGGAKLSPQNTPVEWTVEESWFFRLSAYQDKLLALYESQPDFIQ 186 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P RRNE++ FV+ GL DLS+SR +FDWG+++PD ++MYVW+DALTNYLT GY D+ Sbjct: 187 PESRRNEIMRFVEGGLSDLSISRTSFDWGVRVPDADGHVMYVWVDALTNYLTGCGYPDDA 246 Query: 249 DGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + A++W HVIGKDI+RFHA+YWPAFL+SA LPLPK++F HGF+L++GEK+SK Sbjct: 247 E-RMARYWAEGGDITHVIGKDIVRFHAVYWPAFLMSAKLPLPKQIFGHGFLLNRGEKMSK 305 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGNV DP+E+ + GVD LRYFL+ E+ G DG Y + + R N+DLAN GNL R+ Sbjct: 306 SLGNVADPMELADRFGVDQLRYFLLSEVTFGNDGSYSAEAIIARSNSDLANSFGNLAQRT 365 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +S I K+ DG +P P A E D ++LS + + + M + A+ + V + Sbjct: 366 LSFIAKNLDGRLPEPAAM-EVDSALLSGIADACRIFQNAMNDLAPSVAIEAWMRAVFACN 424 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 Y DAQ PW L+KT+P R VL E I LA+++Q +P A + D + + + R Sbjct: 425 AYIDAQAPWALRKTDPARMEAVLATLYEAIASLAVMIQPVIPASAAALLDQMGIDADARS 484 Query: 486 FQSLDQRL-----KPGFMLHKTFDPIFPRF 510 ++ + GF L P+FPR Sbjct: 485 YELIGSDFYAALRASGFALSPP-KPLFPRL 513 >gi|296535550|ref|ZP_06897732.1| methionine--tRNA ligase [Roseomonas cervicalis ATCC 49957] gi|296264136|gb|EFH10579.1| methionine--tRNA ligase [Roseomonas cervicalis ATCC 49957] Length = 522 Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust. Identities = 245/519 (47%), Positives = 344/519 (66%), Gaps = 17/519 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + Y++T I Y N +PHIGHAY + ADVLAR+ R+ G V F TGTDEHGQK+ K Sbjct: 1 MTSERRFYLTTPIYYVNDKPHIGHAYTSLAADVLARWKRMMGHQVHFLTGTDEHGQKVEK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ G+ + F DQ S+ FRD+A ++ S DDFIRTTE+RH C LWK++ ++G+I+ Sbjct: 61 AAEARGMAPQDFTDQVSQAFRDLAVRMNYSNDDFIRTTEERHKLACAALWKRLEERGEIH 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 G Y GWY++RDEA+Y DE+ + DGQ + PV+W+ E YFFRLS +Q+KLL +Y Sbjct: 121 LGHYEGWYAVRDEAFYGPDEITE-KDGQKFAPTGAPVEWVREPSYFFRLSNWQEKLLEFY 179 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E++P+FI P RRNEVISFVKSGL DLS+SR +F WG+K+P D ++MYVW+DALTNY+T Sbjct: 180 EANPDFIAPASRRNEVISFVKSGLTDLSISRTSFKWGVKVPGDEAHVMYVWLDALTNYIT 239 Query: 241 TTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 GY PD S A FWPAD+H +GKDILRFHAIYWPAFL++A LP P++VF+HG+ + Sbjct: 240 ALGY---PDESAANWSFWPADVHFVGKDILRFHAIYWPAFLMAAGLPTPRRVFAHGWWTN 296 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 +G+KISKSLGNVIDP+ +IEE G+D +RYFL+RE+ G DG + + L R+N +LA+ + Sbjct: 297 EGQKISKSLGNVIDPLALIEEFGLDPVRYFLLREVPFGSDGDFQRKALAARLNGELADAL 356 Query: 359 GNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCS---------RVLQEIRENMQNQ 408 GNL +R++S+I ++ +G++P P G E+D + L+ + ++ + Q Sbjct: 357 GNLANRTLSLIQRNCEGVLPEPAGTEAEADRAFLAETGLEIGADGTLALAAKVDALLNEQ 416 Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468 AL+ V + + E + Y ++PW LKKT+ R VL + +R A LL+ F+P+ Sbjct: 417 KFDAALSLVFASIREANGYITREQPWALKKTDLARMRVVLRRLHDALRAFATLLEPFMPE 476 Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507 K+ D L V E R +L L PG + P+F Sbjct: 477 SMAKLLDQLGVPAEARSVAALATAL-PGGIALPPPSPLF 514 >gi|114327741|ref|YP_744898.1| methionyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] gi|114315915|gb|ABI61975.1| methionyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] Length = 514 Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust. Identities = 239/509 (46%), Positives = 333/509 (65%), Gaps = 5/509 (0%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + Y +T I Y N PHIGHAY + DVLAR+ RL+G +V F TGTDEHGQK+ KAA +A Sbjct: 4 RYYCTTPIYYVNGAPHIGHAYTCVATDVLARWKRLEGREVFFLTGTDEHGQKVEKAAADA 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV + F+D + FR MA+ ++ S+D FIRTTE H LW ++ ++G+IY G Y Sbjct: 64 GVDPQTFIDGMADGFRAMAEKMNTSHDRFIRTTEPEHKKAVAALWSRLEERGEIYLGSYE 123 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY++RDEA+Y +DE+ DG+ Y PV+ + E YFFRLS + D LL YE P+ Sbjct: 124 GWYAVRDEAFYGEDELTLKPDGKRYAPTGAPVERVTEPSYFFRLSRWGDALLKLYEDQPD 183 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RRNEVISFVK GL DLS+SR +F WG+ +P D ++++YVW+DALTNYLT GY Sbjct: 184 FIAPQARRNEVISFVKQGLTDLSISRTSFSWGVPVPGDAKHVVYVWLDALTNYLTAVGYP 243 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D FWPADLH++GKDILRFHAI+WPAFL++A LPLP++VF+HG+ +GEK+SK Sbjct: 244 DE-TSPAWPFWPADLHMVGKDILRFHAIFWPAFLMAAGLPLPRRVFAHGWWTVEGEKMSK 302 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGN I+P +++E G+D +R+FL+RE+ G DG + + + R+N +LAN +GNL R+ Sbjct: 303 SLGNTIEPGALVDEFGLDPVRFFLLREVPFGNDGDFSRRAMIGRMNTELANDLGNLAQRT 362 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +S+I ++ DG +P GA T D ++L + + ++ + Q H AL + ++ + Sbjct: 363 LSLIARNCDGALPARGAETGEDATLLRDAASLPAKMGAQIDRQAFHEALEEAWKVIRAAN 422 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV---ADE 482 Y D Q PW LKKT+PDR VL V +V+R +A ++Q FVP A ++ L V A E Sbjct: 423 GYIDRQAPWALKKTDPDRMRDVLRVLADVLRIIATVMQPFVPGSAARMLVQLGVREAAGE 482 Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 F +L+ L+ G L IFPRF+ Sbjct: 483 QVPFAALETHLEEGTRLPAP-QGIFPRFV 510 >gi|162147584|ref|YP_001602045.1| methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|209542217|ref|YP_002274446.1| methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|161786161|emb|CAP55743.1| Methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|209529894|gb|ACI49831.1| methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 512 Score = 498 bits (1282), Expect = e-139, Method: Compositional matrix adjust. Identities = 238/508 (46%), Positives = 334/508 (65%), Gaps = 6/508 (1%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + Y++T I Y N PHIGHAY + AD++ARF RL G DV F TGTDEHGQK+ +AAQ A Sbjct: 4 RYYVTTPIYYVNGAPHIGHAYTSVAADIVARFKRLAGFDVFFLTGTDEHGQKVEQAAQAA 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ F D+ S +FR M DV+++SYDDFIRTTE RH LW++I+ G IY G Y Sbjct: 64 GLAPIAFADRVSADFRAMYDVMNVSYDDFIRTTEPRHIAGATALWERIAANGHIYLGAYE 123 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY+LRDE++YN+DE+ DG PV+W+ E YFFRLSA+ D+LL YE+ P Sbjct: 124 GWYALRDESFYNEDELVTQPDGTRVAPTGAPVEWVREPSYFFRLSAFADRLLDLYETRPG 183 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 F+ P RRNEV SFV+ GL+DLS+SR +F WGI +P D ++MYVW+DAL NYL+ G+ Sbjct: 184 FVEPASRRNEVASFVRQGLRDLSISRTSFRWGIPVPGDADHVMYVWVDALANYLSAIGFP 243 Query: 246 D--NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 D NP +A FWPA+LH++GKDI+RFHAIYWPA L++A L LP VFSHG+ +GEK+ Sbjct: 244 DARNP---RAGFWPANLHLVGKDIVRFHAIYWPALLMAAGLDLPDCVFSHGWWTIEGEKM 300 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNV+DP +++ E G+D +R+FL+RE+ G D + + R+N +LAN +GNL Sbjct: 301 SKSLGNVVDPRDLVAEFGLDPVRFFLMREMPFGGDSDLSRKAIINRMNVELANDLGNLAQ 360 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R++S + ++ G++P G T+ D ++L+ + + E + + + AL +V ++ Sbjct: 361 RTLSQVARNCGGLLPEQGTRTDDDIALLAQADLLPTLMHEQIDRRALTDALEEVWRVIRA 420 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 + Y D Q PW LKKT+PDR + VL V V+ +R + +LQ ++P + + L VA++ Sbjct: 421 CNAYIDRQAPWALKKTDPDRMAVVLRVLVDALRGIGTMLQPYMPGSMDALLTQLGVAEDE 480 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F SL L PG IFPR++ Sbjct: 481 RDFASLATPL-PGGRALPPPQGIFPRYV 507 >gi|326387756|ref|ZP_08209362.1| methionyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370] gi|326207802|gb|EGD58613.1| methionyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370] Length = 541 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 250/520 (48%), Positives = 337/520 (64%), Gaps = 20/520 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E YI+TAI+YPN +PHIGHAYE I ADV+ RF R G D TGTDEHG K+A+ A++ Sbjct: 14 EPYYITTAISYPNGKPHIGHAYEAIAADVIVRFMRAMGRDARLQTGTDEHGLKMAQKARD 73 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T K DQ S+ F+DM L++ YD FIRTTE RHH+ + LW+++ GD+Y Y Sbjct: 74 LGLTAKELADQMSQYFKDMCAALNVGYDVFIRTTEDRHHEASQELWRRMKANGDLYLDRY 133 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWYS+RDEAYY++ E+ G GQ + Q PV+W EE +FFRLSAY DKLL+ Y +P Sbjct: 134 EGWYSIRDEAYYDESELVAGEGGQKLSPQGTPVEWTVEESWFFRLSAYGDKLLTLYNENP 193 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------DDPQYIMYVWIDALT 236 EFI P RRNE++ FV+ GL+DLS+SR +FDWGIK+P DD ++MYVW+DALT Sbjct: 194 EFIRPESRRNEIMRFVEGGLRDLSVSRTSFDWGIKVPVHGEGETSDD--HVMYVWVDALT 251 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NYLT G+ + + + KFWPA+LH+IGKDI+RFH +YWPAFL+SA LP+P++VF HGF+ Sbjct: 252 NYLTGLGWPEETEEFR-KFWPANLHLIGKDIIRFHTVYWPAFLMSAGLPVPRQVFGHGFL 310 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L++G+K SKSLGNV DP+++ GVD LRYF +RE+ G+DG Y + + R NA+LAN Sbjct: 311 LNRGQKESKSLGNVTDPLDLAARFGVDPLRYFFLREVVFGQDGSYSPEAIATRCNAELAN 370 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE-IRENMQNQLIHRALA 415 GNLV R++SMI K+ G + T + TE+DE++L+ + +E + + L Sbjct: 371 SYGNLVQRTLSMIFKNCGGELATFSS-TEADEALLATVAAATREDLPREFEALNFSAGLE 429 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + V + Y D Q PW L+KT+P+R VLY IR L I +Q VP A K+ D Sbjct: 430 AWMRAVFACNAYVDEQAPWALRKTDPERMRAVLYTLFMAIRDLTIAIQPVVPATAAKVLD 489 Query: 476 ILFVADENRCFQSLDQ------RLKPGFMLHKTFDPIFPR 509 L V ++ R L + R+ G L P FPR Sbjct: 490 QLGVPEDQRGIADLPRADWYMARVATGERLAAPV-PAFPR 528 >gi|87199956|ref|YP_497213.1| methionyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444] gi|87135637|gb|ABD26379.1| methionyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444] Length = 521 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 242/512 (47%), Positives = 331/512 (64%), Gaps = 8/512 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E YI+TAI+YPN +PHIGHAYE I ADV+ARF R G DV F TGTDEHG K+A+ A+ Sbjct: 3 EPFYITTAISYPNGKPHIGHAYEAIAADVIARFQRAMGRDVRFQTGTDEHGLKMAQKARE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + D+ S F M D L++SYD FIRTTE+RHH + + LW+++ GD+Y Y Sbjct: 63 LGITPRELSDEMSSYFIKMCDELNVSYDVFIRTTEERHHASTQELWRRMEANGDLYLDRY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWYS+RDEA+Y++ E+ G G+ + Q PV W EE +FFRLS Y + LL YE +P Sbjct: 123 EGWYSVRDEAFYDESELVAGEGGEKLSPQGTPVDWTVEESWFFRLSKYAEPLLKLYEENP 182 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 FI P RRNEV+ FV+ GL+DLS+SR +FDWG+K+P ++MYVW+DALTNY+T G+ Sbjct: 183 GFIQPDSRRNEVMRFVEGGLRDLSVSRTSFDWGVKVPGCDGHVMYVWVDALTNYITGLGF 242 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D +G AK+WPA+LH+IGKDI+RFH +YWPAFL+SA++ LP++VF HGF+L++G+K S Sbjct: 243 PDE-NGDFAKYWPANLHLIGKDIVRFHTVYWPAFLMSADIALPRQVFGHGFLLNRGQKES 301 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSLGNV DP+++ + GVD LRYFL+RE+A G+DG Y + + R NA+LAN GNLV R Sbjct: 302 KSLGNVTDPLDLADRFGVDPLRYFLMREVAFGQDGSYSAEAIVTRCNAELANSYGNLVQR 361 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 ++SMI K+ G + T + DE + +V + +E+ + + V Sbjct: 362 TLSMIFKNMGGNLETFHSNVGDDELLATVFNACREELPREFSALNFSAGIEAWMRAVFAC 421 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + Y D Q PW L+KT+P+R VL IR L + + VP A K+ D L + E R Sbjct: 422 NAYVDEQAPWALRKTDPERMKAVLLTLFIAIRDLTVAISPVVPAAAAKVLDQLGIPREAR 481 Query: 485 CFQSLD------QRLKPGFMLHKTFDPIFPRF 510 F +L R+ G L + P FPR Sbjct: 482 GFDALTDADWYMARVATGERLAQPM-PAFPRL 512 >gi|289704778|ref|ZP_06501199.1| methionine--tRNA ligase [Micrococcus luteus SK58] gi|289558494|gb|EFD51764.1| methionine--tRNA ligase [Micrococcus luteus SK58] Length = 541 Score = 495 bits (1274), Expect = e-138, Method: Compositional matrix adjust. Identities = 249/531 (46%), Positives = 334/531 (62%), Gaps = 26/531 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R Y++TAI+YPN +PHIGHAYE I +D +ARF RLDG DV F TGTDEHGQK+ + AQ Sbjct: 5 RAPYYLTTAISYPNGEPHIGHAYEYIASDAMARFQRLDGRDVRFLTGTDEHGQKMEQTAQ 64 Query: 64 NAGVTTKVFVDQNSRNFRDMAD-VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GV+ +N+ FR+M D VLDISYD FIRTT+ H + R +W+++ GDIY G Sbjct: 65 QQGVSALELATRNAAVFREMDDDVLDISYDRFIRTTDTDHAEAVREIWRRMEANGDIYLG 124 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYE 181 Y+GWYS+RDE Y+ +DE G DG + V W EEE YFFRLS YQ LL +Y Sbjct: 125 SYAGWYSVRDERYFGEDETEVGQDGVRRAVETGTEVTWTEEESYFFRLSKYQQPLLDHYR 184 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ-----------YIMYV 230 HP+F P R NEVI FV++GL+DLS+SR +F WGI +P ++ YV Sbjct: 185 EHPDFAAPRYRFNEVIRFVEAGLEDLSISRTSFQWGIDLPAPADPDAADADRRADHVTYV 244 Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV 290 W+DALTNYLT G+ + A++WPADLHVIGKDI RFH I+WPAFL+SA L LP++V Sbjct: 245 WVDALTNYLTGAGWPAEDPEAFARYWPADLHVIGKDISRFHCIFWPAFLMSAGLELPRRV 304 Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350 HGF+ + G K+SKSLGNV+ P E + G+DA+R+FL+RE G DG Y + + R Sbjct: 305 MIHGFLNNNGAKMSKSLGNVVHPREWVARYGLDAIRFFLLREFPFGADGSYSHEAVVSRK 364 Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410 NADLAN +GNL RS+SM+ K+ +P PG T++D ++L+ +L+ R Q Sbjct: 365 NADLANNLGNLAQRSLSMVAKNCGAAVPEPGELTDADRAVLAQVDALLERSRSAYAVQDF 424 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 H AL + ++ EV+ YF Q PW L+KT+ R TVLYVT++ +R++A+L Q +P A Sbjct: 425 HDALEETWRVLGEVNAYFADQAPWVLRKTDEPRMRTVLYVTLQAVRRVALLAQPVMPDSA 484 Query: 471 NKIFDILFVADEN------------RCFQSLDQRLKPGFMLHKTFDPIFPR 509 +++ D+L V E R F + + L PG L P+FPR Sbjct: 485 SRLLDLLGVPAEGDAGRTGASGTGPRSFAAFHEDLVPGTPLPAP-QPVFPR 534 >gi|294011648|ref|YP_003545108.1| methionyl-tRNA synthetase [Sphingobium japonicum UT26S] gi|292674978|dbj|BAI96496.1| methionyl-tRNA synthetase [Sphingobium japonicum UT26S] Length = 520 Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust. Identities = 237/510 (46%), Positives = 329/510 (64%), Gaps = 11/510 (2%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+TAI+YPN +PHIGHAYE+I D +ARF R+ G DV F TGTDEHG K+A+ A++ + Sbjct: 7 ITTAISYPNGRPHIGHAYEVIATDAIARFQRMMGRDVFFQTGTDEHGLKMAQTARSRDME 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D+ S FR M D L+ISYD FIRT+E HH + +W+ + GD+Y G Y GWY Sbjct: 67 PRALADEMSGYFRAMNDGLNISYDRFIRTSEPDHHRASQAIWQAMEANGDLYLGRYEGWY 126 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 S+RDEA+Y++ E+ +G GQ + Q PV+W EE +FFRLSAYQ KLL Y + P+FI Sbjct: 127 SVRDEAFYDEKELTEGEGGQKLSPQGTPVEWTVEESWFFRLSAYQQKLLDLYANQPDFIQ 186 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P RRNE++ FV+ GL DLS+SR +FDWG+K+P ++MYVW+DALTNY+T GY D+ Sbjct: 187 PDSRRNEIMRFVEGGLSDLSVSRTSFDWGVKVPGSDGHVMYVWVDALTNYITGCGYPDDT 246 Query: 249 DGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + A++W H+IGKDI+RFH +YWPAFL+SA LPLPK+VF HGF+L++GEK+SK Sbjct: 247 E-RMARYWSEGGDITHIIGKDIVRFHTVYWPAFLMSAKLPLPKQVFGHGFLLNRGEKMSK 305 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGNV DP+E+ E GVD LRYFL+ E+ G DG Y + + R N+DLAN GNL R+ Sbjct: 306 SLGNVADPMELAERFGVDQLRYFLLSEVTFGNDGSYSAEAIVARSNSDLANSFGNLAQRT 365 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +S I K+ +G +P A + D +L+ + + M + A+ + V + Sbjct: 366 LSFIAKNLEGRLPETAA-QDVDRDLLATVGEAARTFQAAMADLAPSTAIEAWMRAVFACN 424 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 Y DAQ PW L+KT+P R VL E I LAI++Q +P A + + + +A++ R Sbjct: 425 AYIDAQAPWTLRKTDPARMEAVLATLYEAIADLAIVIQPIIPASAAALLEQMGIAEDGRS 484 Query: 486 FQSLDQ----RLKP-GFMLHKTFDPIFPRF 510 + ++ RL+ GF L P+FPR Sbjct: 485 YAAIGSDWYARLRASGFTLSAP-KPLFPRL 513 >gi|190570583|ref|YP_001974941.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190356855|emb|CAQ54226.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 509 Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust. Identities = 250/513 (48%), Positives = 344/513 (67%), Gaps = 9/513 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M++ E YI+T I Y N +PHIGHAY +I DV ARF +L G +V FTTGTDEHGQKI K Sbjct: 1 MEQFESFYITTPIYYVNDKPHIGHAYTSLICDVAARFMKLAGKNVKFTTGTDEHGQKIEK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ G+ K F D+ S FR +A++++ YDDFIRTTE+RH LW ++ ++G IY Sbjct: 61 AAKTKGIEPKEFTDEISVTFRKLAELMNFDYDDFIRTTEERHEKAVIALWNRLEERGQIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 YSGWYS+RDEA+Y + E+ G VQW++EE YFFRLS++Q+KLL Y Sbjct: 121 LDSYSGWYSVRDEAFYQESELIYGR-----APTGAEVQWIKEESYFFRLSSWQNKLLELY 175 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E+ P FI P R+NEV+SFVKSGL DLS+SR +F+WGIK+P++ ++++YVWIDALTNYLT Sbjct: 176 ENQPNFIFPESRKNEVVSFVKSGLTDLSISRTSFNWGIKVPENDKHVIYVWIDALTNYLT 235 Query: 241 TTGYLDNPDGSKAKFWPA--DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 + G+ + D KFW ++HVIGKDILRFHA+YWPA LL+A+LPLPK++ HG+ L+ Sbjct: 236 SIGFPNIEDEEYKKFWTNSFNVHVIGKDILRFHAVYWPAILLAADLPLPKQIAVHGWWLN 295 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 +GEKISKSLGNVIDPI + EE GVD LRYFL+RE + G+DG + K + R+N++LAN I Sbjct: 296 EGEKISKSLGNVIDPINLAEEFGVDQLRYFLLREASFGQDGNFSKKNMISRINSELANNI 355 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNLV R++S + K G++P D+ L C ++ ++ +++ ++ + +I Sbjct: 356 GNLVQRTISFLHKQCFGVVPVVDRNLLKDDESLPNCKAIIDQVMDHLSKYEFNQIILLII 415 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 ++ S+ + Y D PW L KT+ +R V+Y +E IR + ILLQ VPK A I D L Sbjct: 416 NISSKANAYIDKSAPWTLSKTDRERMDLVIYKLLEYIRMIGILLQPIVPKSAKMILDQLQ 475 Query: 479 VADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510 + E R +SL + + G L K PIF RF Sbjct: 476 IPKEQRDLKSLCNACVSLGITLPKP-TPIFLRF 507 >gi|239917380|ref|YP_002956938.1| methionyl-tRNA synthetase [Micrococcus luteus NCTC 2665] gi|281414136|ref|ZP_06245878.1| methionyl-tRNA synthetase [Micrococcus luteus NCTC 2665] gi|239838587|gb|ACS30384.1| methionyl-tRNA synthetase [Micrococcus luteus NCTC 2665] Length = 541 Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust. Identities = 249/531 (46%), Positives = 332/531 (62%), Gaps = 26/531 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R Y++TAI+YPN +PHIGHAYE I D +ARF RLDG DV F TGTDEHGQK+ + AQ Sbjct: 5 RAPYYLTTAISYPNGEPHIGHAYEYIATDAMARFQRLDGRDVRFLTGTDEHGQKMEQTAQ 64 Query: 64 NAGVTTKVFVDQNSRNFRDMAD-VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GV+ +N+ F++M D VLDISYD FIRTT+ H + R +W+++ GDIY G Sbjct: 65 QQGVSALELATRNAAVFKEMDDDVLDISYDRFIRTTDTDHAEAVREIWRRMEANGDIYLG 124 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYE 181 Y+GWYS+RDE Y+ +DE G DG + V W EEE YFFRLS YQ LL +Y Sbjct: 125 SYAGWYSVRDERYFGEDETEVGQDGVRRAVETGTEVTWTEEESYFFRLSKYQQPLLDHYR 184 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD-----------PQYIMYV 230 HP+F P R NEVI FV++GL+DLS+SR +F WGI +P ++ YV Sbjct: 185 DHPDFAAPRYRFNEVIRFVEAGLEDLSISRTSFQWGIDLPAPADPEAADADRRADHVTYV 244 Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV 290 W+DALTNYLT G+ + A++WPADLHVIGKDI RFH I+WPAFL+SA L LP +V Sbjct: 245 WVDALTNYLTGAGWPAGDPEAFARYWPADLHVIGKDISRFHCIFWPAFLMSAGLELPHRV 304 Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350 HGF+ + G K+SKSLGNV+ P E + G+DA+R+FL+RE G DG Y + + R Sbjct: 305 MIHGFLNNNGAKMSKSLGNVVHPREWVARYGLDAIRFFLLREFPFGADGSYSHEAVVSRK 364 Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410 NADLAN +GNL RS+SM+ K+ +P PG TE+D ++L+ +L+ R Q Sbjct: 365 NADLANNLGNLAQRSLSMVAKNCGAAVPEPGELTEADRAVLAQVDALLERSRSAYAVQDF 424 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 H AL + ++ EV+ YF Q PW L+KT+ R TVLYVT++ +R++A+L Q +P A Sbjct: 425 HDALEETWRVLGEVNAYFADQAPWVLRKTDEPRMRTVLYVTLQAVRRVALLAQPVMPDSA 484 Query: 471 NKIFDILFVADEN------------RCFQSLDQRLKPGFMLHKTFDPIFPR 509 +++ D+L V E R F + + L PG L P+FPR Sbjct: 485 SRLLDLLGVPAEGDAGRTGASGSGPRSFAAFHEDLVPGTPLPAP-QPVFPR 534 >gi|326403063|ref|YP_004283144.1| methionyl-tRNA synthetase [Acidiphilium multivorum AIU301] gi|325049924|dbj|BAJ80262.1| methionyl-tRNA synthetase [Acidiphilium multivorum AIU301] Length = 511 Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust. Identities = 235/506 (46%), Positives = 327/506 (64%), Gaps = 2/506 (0%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I Y N PHIGHAY + ADVLARF RLDG DV F TGTDEHGQK+ A+ Sbjct: 4 KFYITTPIYYVNGAPHIGHAYTSVAADVLARFKRLDGFDVHFLTGTDEHGQKVEATARAN 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + + F D+ + FR MA ++IS DDFIRTTE RH +C+ +W+ I G I G Y Sbjct: 64 NIAPQEFTDRIAGEFRAMAQAMNISNDDFIRTTEPRHIRSCQAIWQAIERAGAIELGHYE 123 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY++RDEA+Y++ E+ GADG + PV+W+ E YFF+LS +QD+LL YE +PE Sbjct: 124 GWYAVRDEAFYDESELVTGADGIKRSPFGAPVEWVREPSYFFKLSTFQDRLLKLYEDNPE 183 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RNEV+SFV+SGL+D+S+SR +F WGI +P P ++MYVWIDALTNYLT GY Sbjct: 184 FIQPASSRNEVLSFVRSGLRDISISRTSFKWGIPVPGAPDHVMYVWIDALTNYLTACGYP 243 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D D K+WPADLH++GK+I RFHA+YWPA L++A LP+P+++F++G+ +GEK+SK Sbjct: 244 DM-DAPLMKYWPADLHLVGKEITRFHAVYWPAMLMAAGLPVPRRIFANGWWTIEGEKMSK 302 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SL N + +I E G+D LR+ L+RE+ G DG + + + R+N +LAN +GNL R+ Sbjct: 303 SLNNALAVEPLIAEFGLDQLRFCLLREMPFGNDGNFSRRSVITRINVELANDLGNLAQRT 362 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +S I K+ G++P G E+D ++ ++ + +R+ M A+ +V LV + Sbjct: 363 LSFIAKNAGGVVPEAGPAAEADHALRAIADGLPDRMRDAMDRLAYQEAIEEVWKLVRAAN 422 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 Y D Q PW L+KT+P R TVL E +R + ILLQ F+P+ K+ D L + + R Sbjct: 423 AYIDHQAPWALRKTDPQRMLTVLRTLCEALRVVGILLQPFMPEAMAKLLDQLALPADRRG 482 Query: 486 FQSLDQRLKPGFMLHKTFDPIFPRFL 511 F SL L G +L +FPR + Sbjct: 483 FASLATPLDAGAVLPPP-SGLFPRIV 507 >gi|148259982|ref|YP_001234109.1| methionyl-tRNA synthetase [Acidiphilium cryptum JF-5] gi|146401663|gb|ABQ30190.1| methionyl-tRNA synthetase [Acidiphilium cryptum JF-5] Length = 511 Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust. Identities = 235/506 (46%), Positives = 327/506 (64%), Gaps = 2/506 (0%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I Y N PHIGHAY + ADVLARF RLDG DV F TGTDEHGQK+ A+ Sbjct: 4 KFYITTPIYYVNGAPHIGHAYTSVAADVLARFKRLDGFDVHFLTGTDEHGQKVEATARAN 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + + F D+ + FR MA ++IS DDFIRTTE RH +C+ +W+ I G I G Y Sbjct: 64 NIAPQEFTDRIAGEFRAMAQAMNISNDDFIRTTEPRHIRSCQAIWQAIERAGAIELGHYE 123 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY++RDEA+Y++ E+ GADG + PV+W+ E YFF+LS +QD+LL YE +PE Sbjct: 124 GWYAVRDEAFYDESELVTGADGIKRSPFGAPVEWVREPSYFFKLSMFQDRLLKLYEDNPE 183 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RNEV+SFV+SGL+D+S+SR +F WGI +P P ++MYVWIDALTNYLT GY Sbjct: 184 FIQPASSRNEVLSFVRSGLRDISISRTSFKWGIPVPGAPDHVMYVWIDALTNYLTACGYP 243 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D D K+WPADLH++GK+I RFHA+YWPA L++A LP+P+++F++G+ +GEK+SK Sbjct: 244 DM-DAPLMKYWPADLHLVGKEITRFHAVYWPAMLMAAGLPVPRRIFANGWWTIEGEKMSK 302 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SL N + +I E G+D LR+ L+RE+ G DG + + + R+N +LAN +GNL R+ Sbjct: 303 SLNNALAVEPLIAEFGLDQLRFCLLREMPFGNDGNFSRRSVITRINVELANDLGNLAQRT 362 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +S I K+ G++P G E+D ++ ++ + +R+ M A+ +V LV + Sbjct: 363 LSFIAKNAGGVVPEAGPAAEADHALRAIADGLPDRMRDAMDRLAYQEAIEEVWKLVRAAN 422 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 Y D Q PW L+KT+P R TVL E +R + ILLQ F+P+ K+ D L + + R Sbjct: 423 AYIDHQAPWALRKTDPQRMLTVLRTLCEALRVVGILLQPFMPEAMAKLLDQLALPADRRG 482 Query: 486 FQSLDQRLKPGFMLHKTFDPIFPRFL 511 F SL L G +L +FPR + Sbjct: 483 FASLATPLDAGAVLPPP-SGLFPRIV 507 >gi|149184557|ref|ZP_01862875.1| methionyl-tRNA synthetase [Erythrobacter sp. SD-21] gi|148831877|gb|EDL50310.1| methionyl-tRNA synthetase [Erythrobacter sp. SD-21] Length = 519 Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust. Identities = 246/515 (47%), Positives = 333/515 (64%), Gaps = 21/515 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAI YPN +PHIGHAYE + ADV+ARF RL G DV F TGTDEHG K+A+ A++ G Sbjct: 6 YITTAIHYPNGKPHIGHAYETVAADVIARFQRLMGRDVRFQTGTDEHGLKMAQKARDLGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + D+ S F+D+ D LDI+YD FIRTT++ HH R +W+ + K D+Y Y GW Sbjct: 66 TPRELADEMSGAFKDLFDRLDITYDRFIRTTDEDHHKASRAIWEAMEAKSDLYLDRYEGW 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 YS+RDEAYY++ E+ +G G+ + Q PV+W EEE +FFRLS Y + LL + P F+ Sbjct: 126 YSVRDEAYYDEKELVEGEGGEMLSPQGTPVEWTEEETWFFRLSKYAEPLLELLNT-PGFL 184 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 P RRNE+I+FV+ GLKDLS+SR +FDWG+K+P ++MYVW+DALTNY+T GY Sbjct: 185 EPASRRNEMIAFVEGGLKDLSVSRTSFDWGVKVPGADNHVMYVWVDALTNYITGVGY--- 241 Query: 248 PDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 PDG + K+WPA LH+IGKDI+RFH +YWPAFL+SAN+PLPK+VF HGF+L++G K SK Sbjct: 242 PDGGEMWDKYWPASLHLIGKDIVRFHTVYWPAFLMSANIPLPKQVFGHGFLLNRGVKESK 301 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S GNV DPIE+I+ GVD+LRYFL+ E+ GKDG Y + L +VNA+LAN GNL R+ Sbjct: 302 SAGNVTDPIELIDLFGVDSLRYFLMAEVVFGKDGSYSAEALVNKVNAELANSFGNLAQRT 361 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRALAQVISLV 421 +SMI K+ DG + T E++ ++ + V + RE + + + + V Sbjct: 362 LSMIHKNMDGKLET----FETNGDDKTLLATVQEACRETLPREFEALNFSVGIEAWLKAV 417 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 + Y D Q PW LKK++P+R VL + IR LAI +Q VP A + D L V Sbjct: 418 FACNAYVDEQAPWGLKKSDPERMKAVLQTLLLAIRDLAIAIQPVVPTKAAAVLDQLGVTP 477 Query: 482 ENRCFQSLDQR------LKPGFMLHKTFDPIFPRF 510 + R + L + G ++ K P FPR Sbjct: 478 DRRSYADLSDEGWFGSLVAAGHVVEKP-TPAFPRL 511 >gi|103486745|ref|YP_616306.1| methionyl-tRNA synthetase [Sphingopyxis alaskensis RB2256] gi|98976822|gb|ABF52973.1| methionyl-tRNA synthetase [Sphingopyxis alaskensis RB2256] Length = 527 Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust. Identities = 236/516 (45%), Positives = 335/516 (64%), Gaps = 9/516 (1%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++ YI+TAI+YPN +PHIGHAYE I DV+ARF R G +V TGTDEHG K+ + Sbjct: 3 QQSAPFYITTAISYPNGRPHIGHAYEAIATDVMARFQRARGRNVRLVTGTDEHGLKMFQT 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A++ G T ++ S FR+M L+ISYD F+RT++ HH + +WK + GD+Y Sbjct: 63 ARDQGRATIDLANEMSGYFREMYAKLNISYDMFMRTSDPAHHAASQAIWKAMEANGDLYL 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y GWYS+RDEA+Y++ E+ G +G + Q PV+W EE +FFRLS YQD+LL+ Y Sbjct: 123 DRYEGWYSVRDEAFYDESELTDGGEGIRLSPQGTPVEWTVEESWFFRLSNYQDRLLALYR 182 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +P+FI P RRNEV+ FV+ GLKDLS+SR +FDWG+ +P P ++MYVW+DALT YL+ Sbjct: 183 DNPDFIRPESRRNEVLRFVEGGLKDLSVSRTSFDWGVPVPGSPGHVMYVWVDALTTYLSG 242 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY D P FWPA++H+IGKDI+RFH +YWPAFL+SANLPLP++VF HGF+L++GE Sbjct: 243 LGYPD-PASDFGTFWPANIHMIGKDIVRFHTVYWPAFLMSANLPLPRQVFGHGFLLNRGE 301 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+DP+ + E GVDALRY+L+RE++ G+DG Y + + + NADLAN GNL Sbjct: 302 KMSKSLGNVVDPMALAERFGVDALRYYLLREVSFGQDGSYSAEAIVRTANADLANSFGNL 361 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR-ALAQVISL 420 RS+SMI K+ G + + D + + + +++ QL + + + Sbjct: 362 AQRSLSMIFKNLGGELSADYTPAQDDIDLFHLVNLSAKDLLPRAFEQLAFSVGIEEWLRA 421 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V ++Y DAQ PW L+K++P+R VL + +R LAI ++ VP A+ + D + +A Sbjct: 422 VFACNQYVDAQAPWALRKSDPERMRVVLMTLFQAVRTLAIAIRPVVPTAADNLLDQMGIA 481 Query: 481 DENRCFQSLD-----QRLKP-GFMLHKTFDPIFPRF 510 + R F +L RL GF + + PIFPR Sbjct: 482 PDARDFAALADADWFARLAASGFTVGQPV-PIFPRL 516 >gi|51473863|ref|YP_067620.1| methionyl-tRNA synthetase [Rickettsia typhi str. Wilmington] gi|81826289|sp|Q68W54|SYM_RICTY RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|51460175|gb|AAU04138.1| MetRS [Rickettsia typhi str. Wilmington] Length = 507 Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust. Identities = 246/513 (47%), Positives = 338/513 (65%), Gaps = 15/513 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + YI+T I Y N HIGHAY + +DV+ARF R G DV+F TGTDEHGQK+ KAA Sbjct: 2 KNTYYITTPIYYVNDVSHIGHAYTSVASDVIARFMRCCGKDVMFLTGTDEHGQKVEKAAI 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 N + + F D+ S+NFRD+ ++IS DDFIRTTE RH + W+K+ D G IY+G Sbjct: 62 NKNIDPQSFTDKTSQNFRDLMVAMNISNDDFIRTTENRHKKAVAVFWQKLLDNGAIYEGF 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWYS+RDEA+Y++ E+ + PV+W++E YFF L+ +QDKLL +YE + Sbjct: 122 YEGWYSVRDEAFYDESEITEDKLA----PTGAPVEWVKEPSYFFNLAKWQDKLLEFYELN 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+F+ PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++ G Sbjct: 178 PDFVRPISRRNEVISFVKSGLKDLSISRTTFNWGIKVPNNEKHVIYVWLDALVNYISALG 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D + +KFWPA+L V+GKDILRFHA+YWPAFL++A + PK + HG+ + G+KI Sbjct: 238 YPDQ-QSNYSKFWPANLQVVGKDILRFHAVYWPAFLMAAEISPPKSIMVHGWWTNAGQKI 296 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGN IDPI +I+E GVD +RYFL+RE+ G D + ++ L R+N++L+N IGNL+ Sbjct: 297 SKSLGNTIDPITLIDEFGVDQVRYFLMREVIFGADANFTRNNLITRINSELSNKIGNLLH 356 Query: 364 RSVSMILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 R VS + + D +P G + E IL + QE M I++ L +I+L Sbjct: 357 RIVSFVYNNNDAKVPLIKSGVIDKIYELPILKTAMKFAQENILLMDKIEINKILENIINL 416 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 + + Y + PW LKKT+ D+ VLY +EV+R +AI+LQ FVP ANK+ D L VA Sbjct: 417 AEDANIYIANEAPWNLKKTDYDKMLEVLYTLLEVLRYVAIMLQPFVPSSANKMLDQLGVA 476 Query: 481 DENRCFQSL--DQRLKPGFMLHKTFDP--IFPR 509 E R F+ L D LK G +P IFP+ Sbjct: 477 KEERLFKHLVRDHALKAG---SNILEPSIIFPK 506 >gi|219123327|ref|XP_002181978.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406579|gb|EEC46518.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 574 Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust. Identities = 233/506 (46%), Positives = 338/506 (66%), Gaps = 11/506 (2%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+T I Y N +PHIGHAY DV+ARF RL G DV F +GTDEHG+K+ ++A+ + Sbjct: 64 ITTPIYYVNDKPHIGHAYTSTACDVIARFMRLSGRDVFFLSGTDEHGEKVEQSAEKQNMD 123 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + FVDQ S NFR++ ++++IS D FIRTT + H + + W + +KG IY G YSGWY Sbjct: 124 PQGFVDQVSVNFRELLELMNISNDKFIRTTSEDHKKSVQHFWNVMVEKGYIYMGTYSGWY 183 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM-EEEGYFFRLSAYQDKLLSYYESHPEFI 187 S+RDE +Y + E+ DG+ V W+ +EE YFF+LS +++KLL YE +P FI Sbjct: 184 SVRDECFYTESELI---DGKAPTGAE--VSWVAKEESYFFKLSQFEEKLLDLYERNPHFI 238 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 P R+NEV+SFVK GL+DLS+SR +F WG+ +PDD ++MYVW+DALTNY++ GY D Sbjct: 239 APESRKNEVVSFVKGGLRDLSISRTSFKWGVPVPDDEDHVMYVWVDALTNYISALGYPDM 298 Query: 248 PDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 +GS +KFWPA +H++GKDILRFHA+YWPA L++A LPLPK++F+HG+ G+KISKS Sbjct: 299 GEGSDFSKFWPASIHIVGKDILRFHAVYWPAMLMAAELPLPKRLFAHGWWTKDGQKISKS 358 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 +GNVIDP+E++ + GVD R+FL+ E+ G DG + + ++ N +LAN +GNL R++ Sbjct: 359 IGNVIDPVELVNKYGVDQTRFFLMSEVNFGNDGDFSDRAMIQKCNTNLANELGNLCQRTL 418 Query: 367 SMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 S++ K+ + +P P GA+T DE++L + ++ + Q I + + ++ ++ E + Sbjct: 419 SLVFKNCEKAVPNPVGAYTPEDEALLESARNLRNKVATEISQQSILKYVHAMVEMIWEAN 478 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 +Y D PW LKKT+P+R +TVLYV +EV+R AIL Q +P+ A KI D L V R Sbjct: 479 KYIDEMAPWALKKTDPERMATVLYVLLEVLRYSAILYQPLIPESAGKILDQLTVPANERT 538 Query: 486 FQSLDQR--LKPGFMLHKTFDPIFPR 509 F L + +K G + K IFPR Sbjct: 539 FLHLSEEYSIKAGAAISKPVG-IFPR 563 >gi|20806639|ref|NP_621810.1| methionyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] gi|25009362|sp|Q8RDD1|SYM_THETN RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|20515086|gb|AAM23414.1| Methionyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] Length = 638 Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust. Identities = 234/508 (46%), Positives = 339/508 (66%), Gaps = 6/508 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIGH+Y + AD +ARF RL G DV+F TGTDEHGQKI + A+ Sbjct: 2 KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVMFLTGTDEHGQKIQRIAR 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ K +VD +D+ +DISYD FIRTT+ H + + ++ K+ ++GDIYKG Sbjct: 62 EKGMSPKEYVDGIVEWIKDLWKTMDISYDHFIRTTDAYHEEIVQKIFMKLYEQGDIYKGE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+++ + ++ DG+ + PV+ + EEGYFFRLSAY DKLL YYE H Sbjct: 122 YEGWYCTPCESFWTESQL---VDGKCPDCGR-PVERVTEEGYFFRLSAYGDKLLKYYEEH 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNE+I+F+K+GL+DL +SR TFDWGIK+P DP++++YVWIDAL+NY+T G Sbjct: 178 PDFIQPESRRNEMINFIKAGLEDLFVSRSTFDWGIKVPFDPKHVIYVWIDALSNYITALG 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y+ D K+WPAD+H++GK+I+RFH I WPA L++ LPLPKKVF HG+++ +G K+ Sbjct: 238 YMTENDEKFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKKVFGHGWLILEGGKM 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP E+++ GVDA+RYFL+RE+ G DG + + L R+N+DLAN +GNL+S Sbjct: 298 SKSKGNVVDPKELVDRYGVDAIRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLS 357 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+V+MI K +DG++P P + E DE +++V + Q++ E M AL ++ LVS Sbjct: 358 RTVTMIEKYFDGVLPKPSSQEEIDEDLINVAQNLPQKVEEYMDKLQFSNALIEIWKLVSR 417 Query: 424 VDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++Y D PW L K R TVLY E +R + IL+ F+P K+F+ L + + Sbjct: 418 ANKYIDETMPWVLAKDESKRGRLGTVLYNLAESLRFIGILISPFMPNTPKKMFEQLGITE 477 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 + ++SL L K + +FPR Sbjct: 478 DLTTWESLKFGLLKEGTRVKRGEILFPR 505 >gi|71083692|ref|YP_266412.1| methionyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062] gi|71062805|gb|AAZ21808.1| methionyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062] Length = 513 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 225/470 (47%), Positives = 326/470 (69%), Gaps = 1/470 (0%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I YP+A+PH+GHAY I+AD ARF R+DG +V F TGTDEHG KI +AA+ + Sbjct: 6 YITTPIYYPSARPHMGHAYSSIVADFFARFKRIDGFNVHFLTGTDEHGLKIQRAAERKKI 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F D+ S+ FRD++ L++S DFIRTTE+RH T + LW ++ DIY YSGW Sbjct: 66 DPQTFCDEISQTFRDLSKTLNLSNTDFIRTTEERHKKTVQHLWNELEKNDDIYLSKYSGW 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 YS+ DEAYY+D+E+ + + + + + V+W+EEE YFFRLS +QD+LL YYE +P+FI Sbjct: 126 YSVSDEAYYSDEEISEKENVKIAISSGSSVEWIEEESYFFRLSKWQDELLKYYEKNPDFI 185 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 P R+NEVISFVK GLKDLS+SRK F WGIK+P+ +++YVW+DALTNYL+ Y D Sbjct: 186 SPKSRKNEVISFVKGGLKDLSISRKAFSWGIKVPNSQDHVIYVWLDALTNYLSALNYPDT 245 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307 D KFWPA +H+IGKDILRFH++YWPAFL++A +PLPKKV+ HG+IL EK+SKS Sbjct: 246 NDELFKKFWPASVHLIGKDILRFHSVYWPAFLMAAKIPLPKKVYGHGWILSGDEKMSKSK 305 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN++DP+++IE G+D LRY+L++E++ G DG +D L+ +N+DLAN GNL R + Sbjct: 306 GNILDPLDIIEIYGLDPLRYYLIKEVSFGNDGNISQDRLEDCINSDLANNYGNLCQRVTA 365 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 K+ ++P F + D +L+ + L IR + NQ I+ + ++S + E ++Y Sbjct: 366 FAEKNCSSLVPDNTKFNDEDLVMLNKFTDNLDLIRTEIDNQNINYYINFIVSALFEANKY 425 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 F+ Q+PW+ KK + DR +T++Y ++E+IR+++ +L +P K I Sbjct: 426 FNDQEPWK-KKDDKDRLNTIVYTSLEMIRKISFMLYPIIPSSIEKALKIF 474 >gi|85374072|ref|YP_458134.1| methionyl-tRNA synthetase [Erythrobacter litoralis HTCC2594] gi|84787155|gb|ABC63337.1| methionyl-tRNA synthetase [Erythrobacter litoralis HTCC2594] Length = 519 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 239/512 (46%), Positives = 327/512 (63%), Gaps = 9/512 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E YI+TAI+YPN +PHIGHAYE I ADV+ARF R GLDV F TGTDEHG K+A+ A+ Sbjct: 3 EPFYITTAISYPNGRPHIGHAYEAIAADVIARFQRQRGLDVRFQTGTDEHGLKMARKAEE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G + + D+ S F+ M D L++S D FIRT + HH + +W+ + GD+Y Y Sbjct: 63 QGKSPRDLADEMSGYFKAMCDALNVSCDRFIRTVDDDHHRASQAIWRAMEAAGDLYLDRY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWYS+RDEAYY++ E+ G + + Q PV+W EE +FFRLS Y+DKLL ES P Sbjct: 123 EGWYSVRDEAYYDESELVDGEGDEKLSPQGTPVEWTVEESWFFRLSKYEDKLLKLLES-P 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 F+ P RRNE+++FVK GL+DLS+SR +FDWG+K+P ++MYVW+DALTNY+T GY Sbjct: 182 GFLEPASRRNEMVAFVKQGLRDLSVSRTSFDWGVKVPGSEDHVMYVWVDALTNYITGLGY 241 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D+ + + K WPADLH+IGKDI+RFH IYWPAFL+SA LP+PK+VF HGF+L G K S Sbjct: 242 PDDTELWR-KHWPADLHLIGKDIVRFHTIYWPAFLMSAGLPVPKQVFGHGFVLKDGRKES 300 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSLGNV DP ++ + GVDALRYFL+RE++ G DG + + + RVNA+LAN GNL R Sbjct: 301 KSLGNVTDPHDLADFYGVDALRYFLMREVSFGSDGNWSHEAIVTRVNAELANSFGNLAQR 360 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 ++SMI K+ DG + A E + +V + + + + + + I V Sbjct: 361 TLSMIHKNMDGSLEKFEARGEDKALLQTVLTACRESLPREFEKLAFSVGIDEWIKAVYAC 420 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 ++Y D Q PW L+KT+P+R VL + I LAI +Q +P+ A + D L V + R Sbjct: 421 NQYVDEQAPWALRKTDPERMKAVLQTLLMAIHDLAIAIQPVIPEKAGALLDDLGVPTDRR 480 Query: 485 CFQSL------DQRLKPGFMLHKTFDPIFPRF 510 + + +Q + GF + K P FPR Sbjct: 481 TYDHISGEGWFNQLVAEGFTVPKP-TPAFPRL 511 >gi|68171729|ref|ZP_00545082.1| Methionyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str. Sapulpa] gi|88657921|ref|YP_507787.1| methionyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] gi|67998851|gb|EAM85550.1| Methionyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str. Sapulpa] gi|88599378|gb|ABD44847.1| methionyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] Length = 506 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 238/509 (46%), Positives = 336/509 (66%), Gaps = 10/509 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 +YI+T I Y N PHIGH Y +I+D++ARF RLDG V F TGTDEHGQKI KAAQ Sbjct: 4 IYITTPIYYVNDVPHIGHVYTTLISDIIARFMRLDGHSVKFITGTDEHGQKIEKAAQERN 63 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 ++ F D S FR +ADV++ SYDDFIRTTE RH T LW+++ D G IY G YSG Sbjct: 64 MSLLDFTDNTSAVFRQLADVMNYSYDDFIRTTETRHKKTVVALWQRLCDNGAIYLGSYSG 123 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WYS+RDE +Y + E+ DG+ V+W+EE YFFRLS +Q++LL++YE +P+F Sbjct: 124 WYSVRDETFYQEKEL---VDGKAPTGAD--VEWIEEPSYFFRLSNFQERLLAFYEENPDF 178 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 ++P R NEVISFVKSGLKDLS+SR+ WGIK+P+D ++++YVW+DAL NYLT G+ D Sbjct: 179 VIPKYRYNEVISFVKSGLKDLSVSRQNVLWGIKVPNDDKHVIYVWVDALANYLTVLGFPD 238 Query: 247 NPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 +W +D L V+GKDILRFHA+YWPA L++A LPLPKK+ +HG+ ++G+K Sbjct: 239 ENHKDYQAYWASDSSSVLQVVGKDILRFHAVYWPAILMAAELPLPKKILAHGWWTNEGQK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 ISKSLGNVI P +++EE GVD LRYFL++E+ G DG + ++ L +N DLAN IGNLV Sbjct: 299 ISKSLGNVIKPFDLVEEFGVDQLRYFLIKEMPIGNDGDFKRNSLINCINYDLANNIGNLV 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R+VS++ K+ G++PT E +L +L+++R+ + ++ + + L S Sbjct: 359 QRTVSLLYKECGGIVPTVSGNLLQGEEVLPDYQEILEKVRDCVMRCNLNEMIHIIEQLSS 418 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + Y ++ PW L K++P VLY +E I+ + +LLQ +PKL++KI D + + + Sbjct: 419 AANEYIASRAPWRLSKSDPKIMEAVLYKLLEYIKCIGLLLQPVMPKLSSKILDQIGLPEC 478 Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 NR F + +L K +PIF + L Sbjct: 479 NRDFSRFSIPINMNTVLPKP-EPIFAKIL 506 >gi|91763268|ref|ZP_01265232.1| methionyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002] gi|91717681|gb|EAS84332.1| methionyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002] Length = 513 Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust. Identities = 226/472 (47%), Positives = 331/472 (70%), Gaps = 4/472 (0%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I YP+A+PH+GHAY I+AD ARF R+DG +V F TGTDEHG KI +AA+ + Sbjct: 6 YITTPIYYPSARPHMGHAYSSIVADFFARFKRIDGFNVHFLTGTDEHGLKIQRAAERKKI 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F D+ S+ FRD++ L++S DFIRTTE+RH T + LW ++ DIY YSGW Sbjct: 66 DPQTFCDEISQTFRDLSKTLNLSNTDFIRTTEERHKKTVQHLWNELEKNDDIYLSKYSGW 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 YS+ DEAYY+D+E+ + + + + + V+W+EEE YFFRLS +QD+LL YYE +P+FI Sbjct: 126 YSVSDEAYYSDEEIIEKENVKIAISSGSSVEWIEEESYFFRLSKWQDELLKYYEKNPDFI 185 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 P R+NEVISFVK GLKDLS+SRK F WGIK+P+ +++YVW+DALTNY++ Y D Sbjct: 186 SPKSRKNEVISFVKGGLKDLSISRKAFSWGIKVPNSQDHVIYVWLDALTNYISALNYPDT 245 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307 D KFWPA +H+IGKDILRFH++YWPAFL++A +PLPKKV+ HG+IL EK+SKS Sbjct: 246 NDELFKKFWPASVHLIGKDILRFHSVYWPAFLMAAKIPLPKKVYGHGWILSGDEKMSKSK 305 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN++DP+++IE G+D LRY+L++E++ G DG +D L+ +N+DLAN GNL R + Sbjct: 306 GNILDPLDIIEIYGLDPLRYYLIKEVSFGNDGNISQDRLEDCINSDLANNYGNLCQRVTA 365 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 K+ ++P F + D +L+ + L IR + NQ I+ + ++S + E ++Y Sbjct: 366 FAEKNCSSLVPDNIKFNDEDLVMLNKFTDNLDIIRTEIDNQNINYYINFIVSSLFEANKY 425 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP---KLANKIFDI 476 F+ Q+PW+ KK + +R +T++Y ++E+IR+++ +L +P + A KIFD+ Sbjct: 426 FNDQEPWK-KKDDKNRLNTIVYTSLEMIRKISFMLYPIIPSSIEKALKIFDL 476 >gi|299471948|emb|CBN79628.1| Methionyl-tRNA synthetase [Ectocarpus siliculosus] Length = 613 Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust. Identities = 241/539 (44%), Positives = 341/539 (63%), Gaps = 37/539 (6%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 KE Y++T I Y N +PHIGHAY + DV+ARF RLDG +V+F TGTDEHGQK+ + Sbjct: 71 KEMPPYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVEAS 130 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A A + + F D+ S+ FRD+ ++ S D FIRTT+ H LW ++ ++G I Sbjct: 131 ALKADKSPQQFCDEVSQEFRDLLKTMNFSNDRFIRTTDTSHKVAASALWNRLQERGQISL 190 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE-GYFFRLSAYQDKLLSYY 180 G Y+GWYS+RDEA+Y + E+ DG+ + V+W+E+E YFF+LS +Q LL +Y Sbjct: 191 GVYAGWYSVRDEAFYGEAEL---VDGKAPSGAE--VEWVEKEPSYFFKLSEWQQPLLDFY 245 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 +P+FI P RRNE +SFV GL+DLS+SR +F WG+ +P D +++MYVW+DAL NY++ Sbjct: 246 AENPQFIAPESRRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDALANYIS 305 Query: 241 TTGYLDNPD-GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 G+ + + G +KFWPADLHVIGKDILRFH++YWPA LL+A L PK++F HG+ Sbjct: 306 ALGFPEMGEAGEFSKFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKD 365 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G+KISKS GNVIDP++++ GVDA RYFL+ E+ G DG + + + RVN++LAN +G Sbjct: 366 GQKISKSTGNVIDPLDLVARYGVDATRYFLMSEVPFGNDGDFSETAFQNRVNSNLANEVG 425 Query: 360 NLVSRSVSMILKDYDGMIPTPGA---------------------FTESDESILSVCSRVL 398 NL R++SM +K+ G +P P A T D+ +L L Sbjct: 426 NLAMRTLSMAVKNCGGQVPRPAAAADAGDVDEGGDKALGREDFDLTPEDKELLKSAGECL 485 Query: 399 QEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 +R + + Q +H+AL ++ + + +RY D Q PW+LKKT+PDR TVL+V +E IR Sbjct: 486 GVVRPLVGETQQLHKALEAILLVSRDANRYVDFQAPWKLKKTDPDRMKTVLWVLLETIRH 545 Query: 458 LAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQ------RLKPGFMLHKTFDPIFPR 509 + IL Q FVP+ A K+ D L V + + R F +LDQ L+PG L K P+FPR Sbjct: 546 VGILYQPFVPEAAGKLLDQLGVPEGDARLFAALDQGGGGRFSLQPGVPLDKPV-PVFPR 603 >gi|189183674|ref|YP_001937459.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] gi|189180445|dbj|BAG40225.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] Length = 511 Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust. Identities = 234/512 (45%), Positives = 340/512 (66%), Gaps = 11/512 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K YI+T I Y N PHIGHAY I+ADV ARF RL G +V+F TGTDEHGQK+ KAA Sbjct: 2 KSKYYITTPIYYVNDIPHIGHAYTSILADVYARFMRLLGKEVIFLTGTDEHGQKVEKAAS 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 NAGV+ K FVD+ + +F ++ L++S DDFIRTT+ +H + LWK + +GDIY G Sbjct: 62 NAGVSPKEFVDKIASSFVKLSVDLNLSNDDFIRTTDTKHIKAVQKLWKVLEQQGDIYLGK 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY+++DEA+Y++ E+ DG+ V+W+EE YFF LS +Q KLL +YE++ Sbjct: 122 YCGWYAIKDEAFYSESEL--TTDGKAPTGAE--VEWVEESSYFFALSKWQQKLLDWYENN 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 + I P RNEVI+F+K+GL DLS+SR TF WGI +P+D +++YVW+DAL NY++ G Sbjct: 178 HDIIKPAFFRNEVINFIKNGLIDLSISRTTFKWGIAVPNDSSHVIYVWLDALVNYISALG 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y + FWPADLH++GKDILRFHA+YWPAFL+SA LPLPK + HG+ ++G+KI Sbjct: 238 YASDNGTLMTNFWPADLHIVGKDILRFHAVYWPAFLMSAGLPLPKAILVHGWWTNEGQKI 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVI+P+E+ + G+D +RYFL+REI G DG ++K R+N++L N +GNLV Sbjct: 298 SKSVGNVINPVELTSKFGIDQVRYFLLREITIGNDGNFNKISFINRINSELCNKLGNLVH 357 Query: 364 RSVSMILKDYDGMIPTPGAFTESD----ESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 R++S I K IP T ++ ES+L + + + N+ + L +++ Sbjct: 358 RTLSFIYKYNKAKIPQLDGITITNLYKSESLLLKIVMLSDNLANIIDNENVTVILNRIME 417 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +V++ + YFD Q PW+ K +N + +T+LY +E IR +AILLQ F+P+ AN I D++ + Sbjct: 418 IVNQANIYFDQQAPWKFKDSNSQKIATILYTLIETIRCIAILLQPFIPESANTILDLIAI 477 Query: 480 ADENRCFQSLDQR--LKPGFMLHKTFDPIFPR 509 R F +++ +KPG + + PIF + Sbjct: 478 DKTERMFSCINRSHAIKPGKTILEP-KPIFVK 508 >gi|148285047|ref|YP_001249137.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong] gi|146740486|emb|CAM81042.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong] Length = 511 Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust. Identities = 234/512 (45%), Positives = 337/512 (65%), Gaps = 11/512 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K YI+T I Y N PHIGHAY I+ADV ARF RL G +V+F TGTDEHGQK+ KAA Sbjct: 2 KSKYYITTPIYYVNDIPHIGHAYTSILADVYARFMRLLGKEVIFLTGTDEHGQKVEKAAS 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 NAGV+ K FVD+ + +F ++ L++S DDFIRTT+ RH + LW + +GDIY G Sbjct: 62 NAGVSPKEFVDKIASSFVKLSVDLNLSNDDFIRTTDTRHIKAVQKLWNILKQQGDIYLGK 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY+++DEA+Y++ E+ DG+ V+W+EE YFF LS +Q KLL +YE++ Sbjct: 122 YCGWYAIKDEAFYSESEL--TTDGKAPTGAE--VEWVEESSYFFALSKWQQKLLDWYENN 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 + I P RNEVI+F+K+GL DLS+SR TF WGI +P+D +++YVW+DAL NY++ G Sbjct: 178 HDIIKPAFFRNEVINFIKNGLIDLSISRTTFKWGIAVPNDSSHVIYVWLDALVNYISALG 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y + FWPADLH++GKDILRFHA+YWPAFL+SA LPLPK + HG+ ++G+KI Sbjct: 238 YASDNGTLMTNFWPADLHIVGKDILRFHAVYWPAFLMSAGLPLPKAILVHGWWTNEGQKI 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNVI+P+E+ + G+D +RYFL+REI G DG + K R+N++L N +GNLV Sbjct: 298 SKSVGNVINPVELTSKFGIDQVRYFLLREITIGNDGNFSKISFINRINSELCNKLGNLVH 357 Query: 364 RSVSMILKDYDGMIPTPGAFTESD----ESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 R++S I K IP T ++ ES+L + + + N+ + L +++ Sbjct: 358 RTLSFIYKYNKAKIPQLDGITITNLYKSESLLLKIVMLSDNLANIIDNENVTVILNRIME 417 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +V++ + YFD Q PW+ K +N + +T+LY +E IR +AILLQ F+P+ AN I D++ + Sbjct: 418 IVNQANIYFDQQTPWKFKDSNSQKIATILYTLIETIRCIAILLQPFIPESANTILDLIAI 477 Query: 480 ADENRCFQSLDQR--LKPGFMLHKTFDPIFPR 509 R F ++ +KPG + + PIF + Sbjct: 478 EKTERTFSCINSSYAIKPGKTILEP-KPIFVK 508 >gi|256751388|ref|ZP_05492267.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|256749770|gb|EEU62795.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] Length = 632 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 231/508 (45%), Positives = 338/508 (66%), Gaps = 6/508 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIGH+Y + AD +ARF RL G DV F TGTDEHGQKI + A+ Sbjct: 2 KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAR 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ K +VD +D+ ++DISYD FIRTT+K H + + ++ K+ +KGDIYK Sbjct: 62 EKGMSPKEYVDGIVEWIKDLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+++ + ++ DG+ + PV+ ++EEGYFFRLS Y D+LL YY+ H Sbjct: 122 YEGWYCTPCESFWTESQL---VDGKCPDCGR-PVERVKEEGYFFRLSKYGDRLLQYYDEH 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNE+I+F+KSGL+DL +SR +FDWGIK+P DP++++YVWIDAL+NY+T G Sbjct: 178 PDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALG 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y + D K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+ Sbjct: 238 YSTDHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKM 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP E++ + GVDA+RYFL+RE+ G DG + + L R+N+DLAN +GNL+S Sbjct: 298 SKSKGNVVDPKELVSKYGVDAVRYFLLREVPFGADGVFSNETLINRINSDLANDLGNLLS 357 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+V+MI K +DG++P P E D+ +++ + + + E M AL ++ LV Sbjct: 358 RTVTMIEKYFDGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALIEIWKLVRR 417 Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++Y D PW L K + +R TVLY E +R +A+L+ F+P KIF+ L V + Sbjct: 418 ANKYIDETMPWVLAKDESKKERLGTVLYNLTEALRFIAVLISPFMPNTPKKIFEQLGVEE 477 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 ++SL L K + IFPR Sbjct: 478 NLTTWESLKFGLLKEGTKVKRGEIIFPR 505 >gi|73667420|ref|YP_303436.1| methionyl-tRNA synthetase [Ehrlichia canis str. Jake] gi|72394561|gb|AAZ68838.1| methionyl-tRNA synthetase [Ehrlichia canis str. Jake] Length = 506 Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust. Identities = 239/513 (46%), Positives = 338/513 (65%), Gaps = 18/513 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 +YI+T I Y N PHIGH Y +I+D++ARF RLDG +V F TGTDEHGQK+ KAAQ Sbjct: 4 IYITTPIYYVNDVPHIGHVYTTLISDIIARFMRLDGYNVKFVTGTDEHGQKVEKAAQERN 63 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 ++ F + S FR +ADV++ SY+DF+RTTE RH LW + D +Y G YSG Sbjct: 64 ISLLEFTNGTSAVFRQLADVMNYSYNDFVRTTEMRHKKAVTALWTSLCDNDMVYLGSYSG 123 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WYS+RDEA+Y + E+ DG+ V+W+EE YFFRLS +Q+KLL++YE HP+F Sbjct: 124 WYSVRDEAFYQEKEL---IDGKAPTGAE--VEWIEEPSYFFRLSDFQEKLLTFYEEHPDF 178 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I+P R NEVISFVKSGLKDLS+SRK WGIK+P+D ++++YVW+DAL NYLT G+ D Sbjct: 179 IIPKYRYNEVISFVKSGLKDLSVSRKNVVWGIKVPNDDEHVIYVWVDALANYLTVLGFPD 238 Query: 247 NPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 +W D LHV+GKDILRFHA+YWPA L++A LPLPKK+ +HG+ ++G+K Sbjct: 239 VKSKDYQTYWGNDNSTVLHVVGKDILRFHAVYWPAILMAAGLPLPKKILAHGWWTNEGQK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 ISKSLGN+I P +++EE GVD LRYFL++E+ G DG + + K +N+DLAN IGNLV Sbjct: 299 ISKSLGNIIKPFDLVEEFGVDQLRYFLIKEMPIGNDGDFKRSSFIKCINSDLANNIGNLV 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ----NQLIHRALAQVI 418 R+VS++ K+ +G +P +E +L +L++ R ++ N LIH + Q+ Sbjct: 359 QRTVSLLYKECEGKVPLVNNSLLRNEEVLPDYQEILEKARGCIKYYNLNGLIH-IIEQLS 417 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 S+ +E Y A+ PW+L K++ + VLY +E IR + +LLQ +P+L++K+ D + Sbjct: 418 SMANE---YITARVPWKLSKSDREIMKAVLYKLLEYIRCIGLLLQPVIPELSSKMLDQIN 474 Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 + NR F + G +L K +PIF + + Sbjct: 475 LPRCNRDFSKFSIPISMGEILPKP-EPIFAKIV 506 >gi|167038518|ref|YP_001666096.1| methionyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116914|ref|YP_004187073.1| methionyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166857352|gb|ABY95760.1| methionyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319930005|gb|ADV80690.1| methionyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 633 Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust. Identities = 230/508 (45%), Positives = 337/508 (66%), Gaps = 6/508 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIGH+Y + AD +ARF RL G DV F TGTDEHGQKI + A+ Sbjct: 2 KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAR 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ K +VD +D+ ++DISYD FIRTT+K H + + ++ K+ +KGDIYK Sbjct: 62 EKGMSPKEYVDGIVEWIKDLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSK 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+++ + ++ DG+ + V+ ++EEGYFFRLS Y D+LL YY+ H Sbjct: 122 YEGWYCTPCESFWTESQL---VDGKCPDCGRQ-VERVKEEGYFFRLSKYGDRLLQYYDEH 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNE+I+F+KSGL+DL +SR +FDWGIK+P DP++++YVWIDAL+NY+T G Sbjct: 178 PDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALG 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y + D K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+ Sbjct: 238 YSTDHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKM 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP E++ + GVDA+RYFL+RE+ G DG + + L R+N+DLAN +GNL+S Sbjct: 298 SKSKGNVVDPKELVSKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLS 357 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+V+MI K +DG++P P E D+ +++ + + + E M AL ++ LV Sbjct: 358 RTVTMIEKYFDGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALIEIWKLVRR 417 Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++Y D PW L K + +R TVLY E +R +AIL+ F+P KIF+ L + + Sbjct: 418 ANKYIDETMPWVLAKDESKKERLGTVLYNLAEALRFIAILISPFMPNTPKKIFEQLGIEE 477 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 ++SL L K + IFPR Sbjct: 478 NLTTWESLKFSLLKVGTRVKRGEIIFPR 505 >gi|42520232|ref|NP_966147.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] gi|42409970|gb|AAS14081.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 545 Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust. Identities = 245/544 (45%), Positives = 340/544 (62%), Gaps = 41/544 (7%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M++ E YI+T + Y N +PHIGHAY ++ DV+ARF +L G +V FTTGTDEHGQKI K Sbjct: 1 MEQFENFYITTPVYYVNDKPHIGHAYTSLLCDVVARFMKLAGKNVKFTTGTDEHGQKIEK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ + K F D+ S +F+++A ++ YDDFIRTTE+RH LW ++ ++G IY Sbjct: 61 AAKAKEMQPKEFTDEVSVSFKELAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 YSGWYS+RDEA+Y + E+ DG+ VQW++EE YFFRLS +Q+KLL Y Sbjct: 121 LDSYSGWYSVRDEAFYQESEL---IDGKAPTGAE--VQWIKEESYFFRLSNWQEKLLELY 175 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 ++ P FI P RRNEVISFV+SGL DLS+SR +F+WGIK+P + ++++YVWIDALTNYLT Sbjct: 176 KNQPSFIFPESRRNEVISFVRSGLIDLSISRTSFNWGIKVPGNGKHVIYVWIDALTNYLT 235 Query: 241 TTGYLDNPDGSKAKFWPA----------------------------------DLHVIGKD 266 + G+ +FW ++HVIGKD Sbjct: 236 SIGFPSTEGEEYKRFWAEPETQIPVSSTGMTPNQGKTQIPVSSAANLADNSFNVHVIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 ILRFHA+YWPA LL+A+LPLPK++ HG+ L++GEKISKSLGNVIDPI + +E GVD LR Sbjct: 296 ILRFHAVYWPAILLAADLPLPKQIAVHGWWLNEGEKISKSLGNVIDPIGLAQEFGVDQLR 355 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 YFL+RE + G+DG + K + R+N++LAN IGNLV R++S + K G++PT Sbjct: 356 YFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQRTISFLHKQCSGIVPTIDQSLLK 415 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 E L C +L ++ ++ + + +I++ SE + Y D PW L KT+ +R + Sbjct: 416 GEESLPGCKAILDQVMNHLSKYEFNHIILLIINISSEANAYIDKSAPWTLSKTDRERMNL 475 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDP 505 V+Y +E IR + ILLQ VPK A I + L + E R +SL D + G L K P Sbjct: 476 VIYKLLEYIRIIGILLQPIVPKSAEMILNQLQIPKEQRDLKSLCDACVSSGITLPKP-TP 534 Query: 506 IFPR 509 +F R Sbjct: 535 VFLR 538 >gi|167038739|ref|YP_001661724.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|300913676|ref|ZP_07130993.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X561] gi|307723309|ref|YP_003903060.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X513] gi|166852979|gb|ABY91388.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|300890361|gb|EFK85506.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X561] gi|307580370|gb|ADN53769.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X513] Length = 632 Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust. Identities = 229/509 (44%), Positives = 336/509 (66%), Gaps = 6/509 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIGH+Y + AD +ARF RL G DV F TGTDEHGQKI + A+ Sbjct: 2 KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAR 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ K +VD +D+ ++DISYD FIRTT+K H + + ++ K+ +KGDIYK Sbjct: 62 EKGMSPKEYVDGIVEWIKDLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSK 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+++ + ++ DG+ + V+ ++EEGYFFRLS Y D+LL YY+ H Sbjct: 122 YEGWYCTPCESFWTESQL---VDGKCPDCGRQ-VERVKEEGYFFRLSKYGDRLLQYYDEH 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNE+I+F+KSGL+DL +SR +FDWGIK+P DP++++YVWIDAL+NY+T G Sbjct: 178 PDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALG 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y + D K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+ Sbjct: 238 YSTDHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKM 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP E++ + GVDA+RYFL+RE+ G DG + + L R+N+DLAN +GNL+S Sbjct: 298 SKSKGNVVDPKELVSKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLS 357 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+V+MI K + G++P P E D+ +++ + + + E M AL ++ LV Sbjct: 358 RTVTMIEKYFGGILPKPSQKEEVDDDLITTAQNLPKTVEEYMDKLQFSNALIEIWKLVRR 417 Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++Y D PW L K + +R TVLY E +R +A+L+ F+P KIF+ L V + Sbjct: 418 ANKYIDETMPWVLAKDESKKERLGTVLYNLTEALRFIAVLISPFMPNTPKKIFEQLGVEE 477 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 ++SL L K + IFPR Sbjct: 478 NLTTWESLKFGLLKEGTKVKRGEIIFPRI 506 >gi|225677328|ref|ZP_03788304.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590629|gb|EEH11880.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 541 Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust. Identities = 247/544 (45%), Positives = 343/544 (63%), Gaps = 41/544 (7%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M++ E YI+T + Y N +PHIGHAY ++ DV+ARF +L G +V FTTGTDEHGQKI K Sbjct: 1 MEQFENFYITTPVYYVNDKPHIGHAYTSLLCDVVARFMKLAGKNVKFTTGTDEHGQKIEK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ + K F D+ S +F+++A ++ YDDFIRTTE+RH LW ++ ++G IY Sbjct: 61 AAKAKEMQPKEFTDEVSVSFKELAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 YSGWYS+RDEA+Y + E+ DG+ VQW++EE YFFRLS +QDKLL Y Sbjct: 121 LDSYSGWYSVRDEAFYQESEL---IDGKAPTGAE--VQWIKEESYFFRLSNWQDKLLELY 175 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 ++ P FI P RRNEVISFV+SGL DLS+SR +F+WGIK+P + ++++YVWIDALTNYLT Sbjct: 176 KNQPSFIFPESRRNEVISFVRSGLIDLSISRTSFNWGIKVPGNDKHVIYVWIDALTNYLT 235 Query: 241 TTGYLDNPDGSKAKFW-------PA---------------------------DLHVIGKD 266 + G+ +FW PA ++HVIGKD Sbjct: 236 SIGFPSTEGEEYKRFWAESKTQIPASRAGMTPNQGKTQIPVLRAANLADSSFNVHVIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 ILRFHA+YWPA LL+A+LPLPK++ HG+ L++GEKISKSLGNVIDPI + +E GVD LR Sbjct: 296 ILRFHAVYWPAILLAADLPLPKQIAVHGWWLNEGEKISKSLGNVIDPIGLAQEFGVDQLR 355 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 YFL+RE + G+DG + K + R+N++LAN IGNLV R++S + K G++PT Sbjct: 356 YFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQRTISFLHKQCSGIVPTIDRDLLR 415 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 E L C +L ++ +++ ++ + +I++ SE + Y D PW L KT+ +R + Sbjct: 416 GEESLPNCKAILGQVMDHLSKYEFNQIILLIINISSEANAYIDKSAPWTLSKTDRERMNL 475 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDP 505 V+Y +E IR + LLQ VPK A I + L + E R +SL D + G L K P Sbjct: 476 VIYKLLEYIRIIGTLLQPIVPKSAEMILNQLQIPKEQRDLKSLYDTCVSSGITLPKP-TP 534 Query: 506 IFPR 509 +F R Sbjct: 535 VFLR 538 >gi|323706295|ref|ZP_08117861.1| methionyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323534347|gb|EGB24132.1| methionyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 635 Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust. Identities = 230/506 (45%), Positives = 335/506 (66%), Gaps = 6/506 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+ + HIGH+Y + AD +ARF RL G DV+F TGTDEHGQKI + A+ G Sbjct: 5 FYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVMFLTGTDEHGQKIQRKAKEKG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K +VD+ +D+ + +DIS D FIRTT+K+H + + ++ K+ +KGDIYK Y G Sbjct: 65 VTPKQYVDEIVAWIKDLWNTMDISNDKFIRTTDKQHEEIVQKIFTKLYEKGDIYKSEYEG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WY E ++ + ++ DG + PV+ ++EE YFF+LS Y DKLL YYE HP+F Sbjct: 125 WYCTPCETFWTEKQL---VDGNCPDCGR-PVELVKEESYFFKLSNYADKLLKYYEEHPDF 180 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P R NE++SF+KSGL+DL +SR +FDWG+K+P DP++++YVWIDAL+NY+T GY Sbjct: 181 IQPESRLNEMVSFIKSGLEDLCVSRTSFDWGVKVPFDPKHVVYVWIDALSNYITALGYST 240 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 + D K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+SKS Sbjct: 241 DHDEDFKKYWPADVHLVGKEIVRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKMSKS 300 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNV+DP E++ + GVDA+RYFL+RE+ G DG + + L R+N+DLAN GNL+SR+V Sbjct: 301 KGNVVDPKELVSKYGVDAIRYFLLREVPFGADGVFSNEALISRINSDLANDFGNLLSRTV 360 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +M+ K +DG++P + D+ ++S+ + + + + M ALA++ LV ++ Sbjct: 361 TMVEKYFDGVVPEVSDKDDVDDELISIANNLPKVVESYMDKLQFSNALAEIWKLVGRANK 420 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 Y D PW L K + R TVLY VE +R +AIL+ F+P KI++ L + D+ R Sbjct: 421 YIDETMPWVLAKDESKKGRLKTVLYNLVESLRFVAILITPFMPNTPIKIYEQLGIDDDLR 480 Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRF 510 + SL L K + IFPR Sbjct: 481 TWDSLKFGLLKSGTKVKRGENIFPRI 506 >gi|311028969|ref|ZP_07707059.1| methionyl-tRNA synthetase [Bacillus sp. m3-13] Length = 663 Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust. Identities = 230/523 (43%), Positives = 344/523 (65%), Gaps = 15/523 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 + +++ YI+T I YP+ HIGHAY + D +AR+ RL G DV++ TGTDEHGQKI + Sbjct: 2 VADKKTFYITTPIYYPSGNLHIGHAYTTVAGDAMARYKRLKGFDVMYLTGTDEHGQKIQR 61 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GVT++ +VD +D+ + LDISYDDFIRTTE RH + ++K++ D+GDIY Sbjct: 62 KAEEKGVTSQQYVDDIVSGIKDLWEKLDISYDDFIRTTESRHKEVVEKIFKQLLDQGDIY 121 Query: 121 KGCYSGWYSLRDEAYYNDDEVY-------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173 Y GWYS+ DE YY + ++ K G+ ++ H PV+ + E+ YFFR+ Y Sbjct: 122 LDEYEGWYSVPDETYYREHQLVDPIHENGKVVGGKSPDSGH-PVELVREQSYFFRMGKYV 180 Query: 174 DKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 D+LL YY+ +PEFI P R+NE+++ F+K GL+DL++SR +FDWG+K+P DP++++YVWI Sbjct: 181 DRLLQYYDENPEFIQPESRKNEMVNNFIKPGLEDLAVSRTSFDWGVKVPGDPKHVIYVWI 240 Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 DAL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+ Sbjct: 241 DALSNYITALGYGTDNDEKYMKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG++L K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +RVN Sbjct: 301 HGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFVERVNF 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN +GNL++R+V+MI K +DG +P G TE D+++ + +Q M+N Sbjct: 361 DLANDLGNLLNRTVAMIDKYFDGEVPVYNGNVTEFDQTLSDLAVNTVQHYENAMENMEFS 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKL 469 AL+ + LVS ++Y D +PW L K + D+ ++ + E +R + ILL+ F+ + Sbjct: 421 VALSSIWQLVSRTNKYIDETQPWVLAKNDETKDQLASAMAHLAESLRFIGILLKPFLTRT 480 Query: 470 ANKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 KIF L V + ++SL ++ G K DPIFPR Sbjct: 481 PGKIFAQLGVKESLTTWESLSSFGQISAGTKTVKA-DPIFPRL 522 >gi|297543649|ref|YP_003675951.1| methionyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841424|gb|ADH59940.1| methionyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 632 Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust. Identities = 228/509 (44%), Positives = 336/509 (66%), Gaps = 6/509 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIGH+Y + AD +ARF RL G DV F TGTDEHGQKI + A+ Sbjct: 2 KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAK 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ K +VD +D+ ++DISYD FIRTT+K H + + ++ K+ +KGDIYK Sbjct: 62 EKGMSPKEYVDGIVEWIKDLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+++ + ++ DG+ + PV+ ++EEGYFF+LS Y D+LL YY+ H Sbjct: 122 YEGWYCTPCESFWTESQL---VDGKCPDCGR-PVERVKEEGYFFKLSKYGDRLLQYYDEH 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNE+I+F+KSGL+DL +SR +FDWGIK+P DP++++YVWIDAL+NY+T G Sbjct: 178 PDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALG 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y + D K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+ Sbjct: 238 YSTDNDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKM 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP E++ + GVDA+RYFL+RE+ G DG + + L R+N+DLAN +GNL+S Sbjct: 298 SKSKGNVVDPKELVSKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLS 357 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+V+MI K + G++P E D+ +++ + + + E M AL ++ LV Sbjct: 358 RTVTMIEKYFGGILPKLSQKEEVDDDLITTAQNLPKTVEEYMDKLQFSNALIEIWKLVRR 417 Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++Y D PW L K + +R TVLY E +R +A+L+ F+P KIF+ L V + Sbjct: 418 ANKYIDETMPWVLAKDESKKERLGTVLYNLTEALRFIAVLISPFMPNTPKKIFEQLGVEE 477 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 ++SL L K + IFPR Sbjct: 478 NLTTWESLKFGLLKEGTKVKRGEIIFPRI 506 >gi|58698674|ref|ZP_00373565.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] gi|225630227|ref|YP_002727018.1| Methionyl-tRNA synthetase [Wolbachia sp. wRi] gi|58534805|gb|EAL58913.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] gi|225592208|gb|ACN95227.1| Methionyl-tRNA synthetase [Wolbachia sp. wRi] Length = 548 Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust. Identities = 245/547 (44%), Positives = 339/547 (61%), Gaps = 44/547 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M++ E YI+T + Y N +PHIGHAY ++ DV+ARF +L G +V FTTGTDEHGQKI K Sbjct: 1 MEQFENFYITTPVYYVNDKPHIGHAYTSLLCDVVARFMKLAGKNVKFTTGTDEHGQKIEK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ + K F D S +F+++A ++ YDDFIRTTE+RH LW ++ ++G IY Sbjct: 61 AAKAKEMQPKEFTDDVSVSFKELAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 YSGWYS+RDEA+Y + E+ DG+ VQW++EE YFFRLS +QDKLL Y Sbjct: 121 LDSYSGWYSVRDEAFYQESEL---IDGKAPTGAE--VQWIKEESYFFRLSNWQDKLLELY 175 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 ++ P FI P RRNEVISFV+SGL DLS+SR +F+WGIK+P + ++++YVWIDALTNYLT Sbjct: 176 KNQPSFIFPESRRNEVISFVRSGLIDLSISRTSFNWGIKVPGNDKHVIYVWIDALTNYLT 235 Query: 241 TTGYLDNPDGSKAKFWPA-------------------------------------DLHVI 263 + G+ +FW ++HVI Sbjct: 236 SIGFPSTEGEEYKRFWAEPETQIPVSSTGMTPNQGKTQIPVSSTGMTPNLADNSFNVHVI 295 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323 GKDILRFHA+YWPA LL+A+LPLPK++ HG+ L++GEKISKSLGNVIDPI + +E GVD Sbjct: 296 GKDILRFHAVYWPAILLAADLPLPKQIAVHGWWLNEGEKISKSLGNVIDPIGLAQEFGVD 355 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 LRYFL+RE + G+DG + K + R+N++LAN IGNLV R++S + K G++PT Sbjct: 356 QLRYFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQRTISFLHKQCSGIVPTIDQI 415 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 E L C +L ++ ++ + + +I++ SE + Y D PW L KT+ +R Sbjct: 416 LLKGEESLPGCKAILDQVMNHLSKYEFNHIILLIINISSEANAYIDKSAPWTLSKTDRER 475 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL-DQRLKPGFMLHKT 502 + V+Y +E IR + ILLQ VPK A I + L + E R +SL + + G L K Sbjct: 476 VNLVIYKLLEYIRIIGILLQPIVPKSAEMILNQLQIPKEQRDLKSLCNACVSLGITLPKP 535 Query: 503 FDPIFPR 509 P+F R Sbjct: 536 -TPVFLR 541 >gi|58617532|ref|YP_196731.1| methionyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] gi|58417144|emb|CAI28257.1| Methionyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] Length = 506 Score = 468 bits (1205), Expect = e-130, Method: Compositional matrix adjust. Identities = 233/510 (45%), Positives = 329/510 (64%), Gaps = 10/510 (1%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 +Y++T I Y N PHIGH Y +I+D++ARF RLDG +V F TGTDEHGQKI KAA A Sbjct: 3 NIYVTTPIYYVNDVPHIGHVYTTLISDIIARFKRLDGYNVKFITGTDEHGQKIEKAAAKA 62 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + F D S F+ + V++ S+DDFIRTTE RH LW+++ G IY G YS Sbjct: 63 NKSLVEFTDHASAIFQHLTGVMNFSHDDFIRTTEIRHKKAVTELWRRLYHYGKIYLGNYS 122 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY++RDE +Y + E+ DG+ V+W+EE YFFRLS +Q++LL +Y+ HP Sbjct: 123 GWYAVRDETFYQEKEL---IDGKAPTGAE--VEWVEEPSYFFRLSHFQERLLDFYDKHPN 177 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI+P R NEVISFVKSGLKD+S+SR+ WGI +P+D +I+YVWIDALTNYLTT G+ Sbjct: 178 FIIPRHRYNEVISFVKSGLKDISISRQNISWGISVPEDDNHIIYVWIDALTNYLTTLGFP 237 Query: 246 DNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 + +W + +HV+GKDILRFHA+YWPA L++A LPLPK++ +HG+ ++G+ Sbjct: 238 EINSSEYKNYWVDENSTVVHVVGKDILRFHAVYWPAILMAAELPLPKQILAHGWWTNEGQ 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 KISKSLGNVI+P E+IEE GVD +RYFL++E+ G DG Y ++ + +N DLAN IGNL Sbjct: 298 KISKSLGNVINPFELIEEFGVDQVRYFLIKEMPVGNDGDYKRNSIISCINCDLANNIGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 V R+VS++ K+ G IP + DE L +L+ +R + ++ + V L Sbjct: 358 VQRTVSLLHKECHGTIPNVASSLFQDEDALPNYQEILENVRICINQYNLNGVIHIVEELS 417 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 S + Y + PW+L KT+P VLY +E IR + +LLQ +P L++KI D + +++ Sbjct: 418 SMANEYIAFRAPWKLSKTDPIVMQAVLYKLLEYIRCVGLLLQPIMPYLSSKILDQIALSE 477 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + + G +L K +PIF + + Sbjct: 478 YKRSFNNFAVPIDTGIILPKP-EPIFTKII 506 >gi|172056076|ref|YP_001812536.1| methionyl-tRNA synthetase [Exiguobacterium sibiricum 255-15] gi|171988597|gb|ACB59519.1| methionyl-tRNA synthetase [Exiguobacterium sibiricum 255-15] Length = 651 Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust. Identities = 223/509 (43%), Positives = 348/509 (68%), Gaps = 11/509 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+A+ HIGHAY + D +AR+ RL G DV + TGTDEHGQKI + A+ AG Sbjct: 5 FYITTPIYYPSAKLHIGHAYTTVAGDAMARYKRLQGFDVRYLTGTDEHGQKIQEKAKEAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 V+ + FVD + + D LDISYDD+IRTTE RH + +++ + +KGDIY G Y G Sbjct: 65 VSEQEFVDGVVEQIKVLWDRLDISYDDYIRTTEPRHKEVVERVFETLLEKGDIYLGEYEG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WYS+ DE YY + ++ DG+ ++ H PV+ + EE YFFR+S Y D+L+ YYE++P F Sbjct: 125 WYSVPDETYYTESQL---VDGKSPDSGH-PVELVREECYFFRISQYADRLVEYYEANPSF 180 Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 ILP R++E+I+ F+K GL+DL++SR TFDWG+K+P +P++++YVW+DALTNY+++ GY Sbjct: 181 ILPESRKHEMINNFIKPGLQDLAVSRTTFDWGVKVPSNPKHVVYVWVDALTNYISSLGYG 240 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + G+ K+WPAD+H++GK+I+RFH I WPA L++ +LPLPK+VF+HG++L K K+SK Sbjct: 241 TDDQGNFDKYWPADVHLVGKEIVRFHTIVWPALLMALDLPLPKQVFAHGWLLMKDGKMSK 300 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S GNV+DP+ +I+ G+DALRY+L+RE+ G DG + + +R+N DLAN +GNL++R+ Sbjct: 301 SKGNVVDPVPMIDRYGLDALRYYLLREVPFGSDGMFTPEAFVERMNFDLANDLGNLLNRT 360 Query: 366 VSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 ++MI K +DG+IPT G T DE++ ++ ++++ M++ AL+ + L+S Sbjct: 361 IAMITKYFDGVIPTYAGNVTPFDETLSTLAKETVEKVEAAMEHMEFSVALSHIWQLISRA 420 Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++Y D +PW L K + D ++ + V +R +AI+LQ F+ + ++F L + + Sbjct: 421 NKYIDETQPWVLAKDESKTDELASSMVHLVGALRHVAIMLQPFMTRSPKEMFRQLGLEGQ 480 Query: 483 NRCFQSLDQ--RLKPGFMLHKTFDPIFPR 509 + +L+Q ++ G + +PIFPR Sbjct: 481 PMDWTALEQFAAIEEGTKVGAA-EPIFPR 508 >gi|289577361|ref|YP_003475988.1| methionyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] gi|289527074|gb|ADD01426.1| methionyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] Length = 633 Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust. Identities = 227/508 (44%), Positives = 335/508 (65%), Gaps = 6/508 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIGH+Y + AD +ARF RL G DV F TGTDEHGQKI + A+ Sbjct: 2 KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAK 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ K +VD +++ ++DISYD FIRTT+K H + + ++ K+ +KGDIYK Sbjct: 62 EKGMSPKEYVDGIVEWIKNLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+++ + ++ DG+ + PV+ ++EEGYFF+LS Y D+LL YY+ H Sbjct: 122 YEGWYCTPCESFWTESQL---VDGKCPDCGR-PVERVKEEGYFFKLSKYGDRLLQYYDEH 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNE+I+F+KSGL+DL +SR +FDWGIK+P DP++++YVWIDAL+NY+T G Sbjct: 178 PDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALG 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+ Sbjct: 238 YSTYHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKM 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP E++ + GVDA+RYFL+RE+ G DG + + L R+N+DLAN GNL+S Sbjct: 298 SKSKGNVVDPKELVSKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDFGNLLS 357 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+V+MI K + G++P P E D+ +++ + + + E M AL ++ LV Sbjct: 358 RTVTMIEKYFGGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALIEIWKLVRR 417 Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++Y D PW L K + +R TVLY E +R +A+L+ F+P KIF+ L + + Sbjct: 418 ANKYIDETMPWVLAKDESKKERLGTVLYNLAEALRFIAVLISPFMPNTPKKIFEQLGIEE 477 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 ++SL L K + IFPR Sbjct: 478 NLTTWESLKFGLLKEGTKVKRGEIIFPR 505 >gi|217966690|ref|YP_002352196.1| methionyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724] gi|217335789|gb|ACK41582.1| methionyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724] Length = 634 Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust. Identities = 225/471 (47%), Positives = 314/471 (66%), Gaps = 5/471 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K YI+T I Y N++PHIG Y I+AD ARF+RL DV F TG DEHGQK+A+ AQ Sbjct: 9 RNKFYITTPIYYSNSEPHIGTVYTTIVADTFARFYRLKDYDVFFLTGLDEHGQKLARTAQ 68 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + +VD ++ F + + + I+ DDFIRTTEKRH + + +++K+ DKG +YKG Sbjct: 69 ERGYTPQEYVDLMAQKFIETWEKIGITNDDFIRTTEKRHEEVVQKVFQKLYDKGYLYKGS 128 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWY E ++ +E++ G A PV+W+EEE Y+F+LSA+ + LL Y E H Sbjct: 129 YAGWYCTPCETFWQKEELHDGN----CPACGRPVEWLEEETYYFKLSAFAEPLLKYIEEH 184 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 PEF+ P RRNEVISF+KSGLKD+S +R T WGI +P DP++ +YVW DAL NY++ G Sbjct: 185 PEFVYPETRRNEVISFIKSGLKDISATRTTVKWGIPVPFDPKHTVYVWFDALVNYISALG 244 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 YL + D ++WPAD+H+IGKDILRFHAI WPA L++ N+PLPK V +HGF KG KI Sbjct: 245 YLTDDDSKFKRYWPADVHLIGKDILRFHAIIWPAILMALNIPLPKTVLAHGFWTIKGGKI 304 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GN +DP E+I GVDALRYFL+RE+ G DG Y + +R ++DLAN +GNL++ Sbjct: 305 SKSKGNRVDPHELINLYGVDALRYFLLREVPLGLDGEYSDEAFHRRYHSDLANDLGNLLN 364 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R +++ K +G +P P F E D+ +L + ++ E M N AL + +V E Sbjct: 365 RVLTVAEKYTEGKVPEPKEFQEEDKFLLQKGDDMANKVEEAMANFNPANALTYIWEVVQE 424 Query: 424 VDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +RY D Q PW L + N DR +TV+Y +E +R+++I+L AF+P +A +I Sbjct: 425 ANRYIDQQAPWNLASSGNKDRLNTVIYTLLEALRKISIMLYAFMPNIAEEI 475 >gi|217965737|ref|YP_002351415.1| methionyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|217335007|gb|ACK40801.1| methionyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|307569716|emb|CAR82895.1| metS [Listeria monocytogenes L99] Length = 665 Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust. Identities = 233/522 (44%), Positives = 346/522 (66%), Gaps = 13/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 4 EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD+ + F+++ L+IS DFIRTT+ RH + +++++ ++GDIY Sbjct: 64 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 123 Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + +EVYK +G+ + N V+ ++EE YFFR+S Y D+ Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L+ YY SHPEFILP R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPK VF HG Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +IL K K+SKS GNV+DP +I+ G+DALRY+L+RE+ G DG + + RVN DL Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 363 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG IP G TE D++++ + V++E +M++ A Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEASMEHMQFSVA 423 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L Q+ SLVS ++Y D PW L K RA ++V+ E +R +A+LLQ F+ + Sbjct: 424 LNQLWSLVSRTNKYIDETAPWALAKEEEKRAELASVMTHLAENLRIIAVLLQPFLTRTPG 483 Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 +IF L + +EN + + S+ + G + K PIFPR Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 525 >gi|57239498|ref|YP_180634.1| methionyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|57161577|emb|CAH58505.1| methionyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] Length = 506 Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust. Identities = 233/509 (45%), Positives = 330/509 (64%), Gaps = 10/509 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 +Y++T I Y N PHIGH Y +I+D++ARF RLDG +V F TGTDEHGQKI KAA A Sbjct: 4 IYVTTPIYYVNDVPHIGHVYTTLISDIIARFKRLDGYNVKFITGTDEHGQKIEKAAAKAN 63 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + F D S F+ +A V++ S+DDFIRTTE RH LW+++ + G IY G Y+G Sbjct: 64 KSLVEFTDHASAIFQHLAGVMNFSHDDFIRTTEIRHKKAVTGLWRRLYNYGKIYLGNYAG 123 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WY++RDE +Y + E+ DG+ V+W+EE YFFRLS +Q++LL +Y+ HP F Sbjct: 124 WYAVRDETFYQEKEL---IDGKAPTGAE--VEWVEEPSYFFRLSHFQERLLDFYDKHPNF 178 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I+P R NEVISFVKSGLKD+S+SR+ WGI +P+D +I+YVWIDALTNYLTT G+ + Sbjct: 179 IIPKHRYNEVISFVKSGLKDISISRQNISWGISVPEDDNHIIYVWIDALTNYLTTLGFPE 238 Query: 247 NPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 +W + +HV+GKDILRFHA+YWPA L++A LPLPK++ +HG+ ++G+K Sbjct: 239 INSSEYKNYWVDENSTVVHVVGKDILRFHAVYWPAILMAAELPLPKQILAHGWWTNEGQK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 ISKSLGNVI+P E+IEE GVD +RYFL++E+ G DG Y + + +N DLAN IGNLV Sbjct: 299 ISKSLGNVINPFELIEEFGVDQVRYFLIKEMPVGNDGDYKRSSIINCINCDLANNIGNLV 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R+VS++ K+ G IP + DE L +L+ +R + ++ + V L S Sbjct: 359 QRTVSLLHKECRGTIPNVASSLFQDEDALPNYQEILENVRICINQYNLNGMIHIVEELSS 418 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + Y + PW+L KT+P VLY +E IR + +LLQ +P L++KI D + +++ Sbjct: 419 IANEYIAFRAPWKLSKTDPIVMQAVLYKLLEYIRCVGLLLQPIMPYLSSKILDQIALSEY 478 Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + + G +L K +PIF + + Sbjct: 479 KRSFNNFAVPIDTGIILPKP-EPIFTKII 506 >gi|312109184|ref|YP_003987500.1| methionyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] gi|311214285|gb|ADP72889.1| methionyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] Length = 648 Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust. Identities = 232/515 (45%), Positives = 345/515 (66%), Gaps = 12/515 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E++ Y++T I YP+ HIGHAY + D +AR+ RL G DV++ TGTDEHGQKI + A Sbjct: 2 EKKTFYLTTPIYYPSGNLHIGHAYTTVAGDAMARYKRLRGYDVMYLTGTDEHGQKIQRKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + GVT + +VD+ +++ LDISYDDFIRTT+ RH ++ ++ ++GDIY G Sbjct: 62 EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQDRHKKVVEKIFARLVEQGDIYLG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E++Y + ++ DG + PV+ ++EE YFF++S Y D+LL YYE Sbjct: 122 EYEGWYCTPCESFYTERQL---VDGNCPDC-GRPVEKVKEESYFFKMSKYVDRLLQYYEE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +PEFI P R+NE+I+ F+K GL+DL++SR TFDWGIK+P DP++++YVWIDALTNY+T Sbjct: 178 NPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALTNYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+HG++L K Sbjct: 238 LGYGTDDDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINYDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 + R+V+MI K +DG+IPT GA T D ++ +++ E M+ ALA V L Sbjct: 358 LHRTVAMIEKYFDGVIPTYRGAKTPFDNDLVETAKETVKQYEEAMEKMEFSVALATVWQL 417 Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 ++ ++Y D +PW L K + ++ ++V+ E +R +AILLQ F+ + +KIF L Sbjct: 418 INRTNKYIDETQPWVLAKEESQKEQLASVMTHLAESLRHVAILLQPFLTRTPDKIFAQLG 477 Query: 479 VADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 + DE+ + + SL + +K G + K DP+FPR Sbjct: 478 IVDESLKQWDSLYEFGLIKEGTKVAKG-DPLFPRL 511 >gi|58584456|ref|YP_198029.1| methionyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418772|gb|AAW70787.1| Methionyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 540 Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust. Identities = 246/544 (45%), Positives = 341/544 (62%), Gaps = 41/544 (7%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M++ E YI+T I Y N +PHIGHAY +I DV ARF +L G +V FTTGTDEHGQKI K Sbjct: 1 MEQFENFYITTPIYYVNDKPHIGHAYTSLICDVTARFMKLAGKNVKFTTGTDEHGQKIEK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ G+ K F D+ S +FR +A+ +D YDDFIRTTE+RH LW ++ ++G IY Sbjct: 61 AAKTKGMHPKEFTDKVSVSFRKLAEFIDFQYDDFIRTTEERHEKAVVALWDRLEERGQIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 YSGWYS+ DEA+Y + E+ DG+ V+W++EE YFFRLS++Q+KLL Y Sbjct: 121 LDSYSGWYSVSDEAFYQESEL---IDGKAPTGAE--VEWVKEESYFFRLSSWQNKLLELY 175 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 ++ P FI P R+NEVISFVKSGL DLS+SR +F+WGIK+P + ++I+YVW+DALTNYLT Sbjct: 176 KNQPNFIFPESRKNEVISFVKSGLTDLSISRISFNWGIKVPRNDKHIIYVWVDALTNYLT 235 Query: 241 TTGYLDNPDGSKAKFWPA----------------------------------DLHVIGKD 266 + G+ + + KFW ++HVIGKD Sbjct: 236 SIGFPNTENEEYKKFWAESQSVIQVADTWIQKEIQISASRARMTSNLADNSFNIHVIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 ILRFHA+YWPA LL+A+LPLPK++ HG+ L++G+KISKSLGNVIDPI + +E GVD LR Sbjct: 296 ILRFHAVYWPAILLAADLPLPKQIVVHGWWLNEGKKISKSLGNVIDPIALAKEFGVDQLR 355 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 YFL+RE + G+DG + K + R+N++LAN IGNLV R++S + K G++PT Sbjct: 356 YFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQRTISFLHKRCFGVVPTVDKSLLK 415 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 E L + ++ +++ + + +I++ SE + Y D PW L KT+ +R + Sbjct: 416 GEEGLPNYRAIFNQVMDHLSKYEFNHIILLIINISSEANAYIDKSAPWILSKTDRERMNL 475 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDP 505 V+Y +E IR + ILLQ VP+ A I D L + E R +SL + G LHK P Sbjct: 476 VIYKLLEYIRIIGILLQPIVPRPAEVILDQLQIPKEQRDLKSLCGAYVSSGTTLHKP-TP 534 Query: 506 IFPR 509 +F R Sbjct: 535 VFLR 538 >gi|290892267|ref|ZP_06555262.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] gi|290558093|gb|EFD91612.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] Length = 664 Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust. Identities = 233/522 (44%), Positives = 346/522 (66%), Gaps = 13/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 3 EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD+ + F+++ L+IS DFIRTT+ RH + +++++ ++GDIY Sbjct: 63 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + +EVYK +G+ + N V+ ++EE YFFR+S Y D+ Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L+ YY SHPEFILP R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPK VF HG Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +IL K K+SKS GNV+DP +I+ G+DALRY+L+RE+ G DG + + RVN DL Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG IP G TE D++++ + V++E +M++ A Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEASMEHMQFSVA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L Q+ SLVS ++Y D PW L K RA ++V+ E +R +A+LLQ F+ + Sbjct: 423 LNQLWSLVSRTNKYIDETAPWALAKEEEKRAELASVMTHLAENLRIIAVLLQPFLTRTPG 482 Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 +IF L + +EN + + S+ + G + K PIFPR Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 524 >gi|307265681|ref|ZP_07547234.1| methionyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] gi|326389218|ref|ZP_08210786.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] gi|306919325|gb|EFN49546.1| methionyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] gi|325994581|gb|EGD53005.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 633 Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust. Identities = 227/509 (44%), Positives = 336/509 (66%), Gaps = 6/509 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIGH+Y + AD +ARF RL G DV F TGTDEHGQKI + A+ Sbjct: 2 KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAR 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ K +VD +D+ +DIS D FIRTT+K H + + ++ K+ +KGDIYK Sbjct: 62 EKGMSPKEYVDGIVEWIKDLWKTMDISNDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+++ + ++ DG+ + PV+ ++EEGYFF+LS Y D+LL YY+ H Sbjct: 122 YEGWYCTPCESFWTESQL---VDGKCPDCGR-PVERVKEEGYFFKLSKYGDRLLQYYDEH 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNE+I+F+KSGL+DL +SR +FDWGIK+P DP++++YVWIDAL+NY+T G Sbjct: 178 PDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPRHVIYVWIDALSNYITALG 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y + D K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+ Sbjct: 238 YSTDHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKM 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP E++ + GVDA+RYFL+RE+ G DG + + L R+N+DLAN +GNL+S Sbjct: 298 SKSKGNVVDPKELVRKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLS 357 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+V+MI K ++G++P P E D+ +++ + + + E M AL ++ LV Sbjct: 358 RTVTMIEKYFEGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALIEIWKLVRR 417 Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++Y D PW L K + +R TVLY E +R +AIL+ F+P K+F+ L + Sbjct: 418 ANKYIDETMPWILAKDESKKERLGTVLYNLAEALRFIAILISPFMPNTPQKMFEQLGIEK 477 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + ++SL L K + IFPR Sbjct: 478 DLTTWESLKFGLLKEGTKVKRGEIIFPRI 506 >gi|255022653|ref|ZP_05294639.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-208] Length = 619 Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust. Identities = 232/522 (44%), Positives = 346/522 (66%), Gaps = 13/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 3 EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD+ + F+++ L+IS DFIRTT+ RH + +++++ ++GDIY Sbjct: 63 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + +E+YK +G+ + N V+ ++EE YFFR+S Y D+ Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEIYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L+ YY SHPEFILP R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPK VF HG Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +IL K K+SKS GNV+DP +I+ G+DALRY+L+RE+ G DG + + RVN DL Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG IP G TE D++++ + V++E +M++ A Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEASMEHMQFSVA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L Q+ SLVS ++Y D PW L K RA ++V+ E +R +A+LLQ F+ + Sbjct: 423 LNQLWSLVSRTNKYIDETAPWALAKEEEKRAELASVMTHLAENLRIIAVLLQPFLTRTPG 482 Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 +IF L + +EN + + S+ + G + K PIFPR Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 524 >gi|295401997|ref|ZP_06811959.1| methionyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|294975999|gb|EFG51615.1| methionyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] Length = 648 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 231/515 (44%), Positives = 345/515 (66%), Gaps = 12/515 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E++ Y++T I YP+ HIGHAY + D +AR+ RL G DV++ TGTDEHGQKI + A Sbjct: 2 EKKTFYLTTPIYYPSGNLHIGHAYTTVAGDAMARYKRLRGYDVMYLTGTDEHGQKIQRKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + GVT + +VD+ +++ LDISYDDFIRTT+ RH ++ ++ ++GDIY G Sbjct: 62 EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQDRHKKVVEKIFARLVEQGDIYLG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E++Y + ++ DG + PV+ ++EE YFF++S Y D+LL YYE Sbjct: 122 EYEGWYCTPCESFYTERQL---VDGNCPDC-GRPVEKVKEESYFFKMSKYVDRLLQYYEE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +PEFI P R+NE+I+ F+K GL+DL++SR TFDWGIK+P DP++++YVWIDALTNY+T Sbjct: 178 NPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALTNYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+HG++L K Sbjct: 238 LGYGTDDDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINYDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 + R+V+MI K +DG+IPT GA T D ++ +++ E M+ ALA V L Sbjct: 358 LHRTVAMIEKYFDGVIPTYRGAKTPFDNDLVETAKETVKQYEEAMEKMEFSVALATVWQL 417 Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 ++ ++Y D +PW L K + ++ ++V+ E +R +AILLQ F+ + +KIF L Sbjct: 418 INRTNKYIDETQPWVLAKEESQKEQLASVMTHLAESLRHVAILLQPFLTRTPDKIFAQLG 477 Query: 479 VADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 + DE+ + + SL + +K G + K +P+FPR Sbjct: 478 IVDESLKQWDSLYEFGLIKEGTKVAKG-EPLFPRL 511 >gi|239825617|ref|YP_002948241.1| methionyl-tRNA synthetase [Geobacillus sp. WCH70] gi|239805910|gb|ACS22975.1| methionyl-tRNA synthetase [Geobacillus sp. WCH70] Length = 648 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 232/515 (45%), Positives = 344/515 (66%), Gaps = 12/515 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E++ Y++T I YP+ + HIGHAY + D +AR+ RL G DV++ TGTDEHGQKI + A Sbjct: 2 EKKTFYLTTPIYYPSGKLHIGHAYTTVAGDAMARYKRLRGYDVMYLTGTDEHGQKIQRKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + GVT + +VD+ +++ LDISYDDFIRTT++RH ++ ++ ++GDIY G Sbjct: 62 EEKGVTPQQYVDEIVEGIQELWKKLDISYDDFIRTTQERHKKVVEKIFARLVEQGDIYLG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E++Y + ++ DG + PV+ ++EE YFFR+S Y D+LL YYE Sbjct: 122 EYEGWYCTPCESFYTERQL---VDGNCPDC-GRPVEKVKEESYFFRMSKYVDRLLQYYEE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +PEFI P R+NE+I+ F+K GL+DL++SR TFDWGIK+P DP++++YVWIDALTNY+T Sbjct: 178 NPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALTNYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+HG++L K Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINYDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 ++R+V+MI K +DGMIP GA T D ++ +++ E M+ ALA V L Sbjct: 358 LNRTVAMIEKYFDGMIPPYRGAKTAFDNDLVEKAKETVKQYEEAMEKMEFSIALASVWQL 417 Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 ++ ++Y D +PW L K ++ ++V+ E +R +AILLQ F+ + KIF L Sbjct: 418 INRTNKYIDETQPWLLAKDEGKKEQLASVMTHLAESLRHVAILLQPFLTRTPEKIFAQLG 477 Query: 479 VADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 + DE + + SL + +K G + K +P+FPR Sbjct: 478 IVDEQLKQWDSLYEFGLIKEGTKVTKG-EPLFPRL 511 >gi|58579479|ref|YP_197691.1| methionyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58418105|emb|CAI27309.1| Methionyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] Length = 506 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 232/509 (45%), Positives = 329/509 (64%), Gaps = 10/509 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 +Y++T I Y N PHIGH Y +I+D++ARF RLDG +V F TGTDEHGQKI KAA A Sbjct: 4 IYVTTPIYYVNDVPHIGHVYTTLISDIIARFKRLDGYNVKFITGTDEHGQKIEKAAAKAN 63 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + F D S F+ + V++ S+DDFIRTTE RH LW+++ + G IY G Y+G Sbjct: 64 KSLVEFTDHASAIFQHLTGVMNFSHDDFIRTTEIRHKKAVTGLWRRLYNYGKIYLGNYAG 123 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WY++RDE +Y + E+ DG+ V+W+EE YFFRLS +Q++LL +Y+ HP F Sbjct: 124 WYAVRDETFYQEKEL---IDGKAPTGAE--VEWVEEPSYFFRLSHFQERLLDFYDKHPNF 178 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I+P R NEVISFVKSGLKD+S+SR+ WGI +P+D +I+YVWIDALTNYLTT G+ + Sbjct: 179 IIPKHRYNEVISFVKSGLKDISISRQNISWGISVPEDDNHIIYVWIDALTNYLTTLGFPE 238 Query: 247 NPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 +W + +HV+GKDILRFHA+YWPA L++A LPLPK++ +HG+ ++G+K Sbjct: 239 INSSEYKNYWVDENSTVVHVVGKDILRFHAVYWPAILMAAELPLPKQILAHGWWTNEGQK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 ISKSLGNVI+P E+IEE GVD +RYFL++E+ G DG Y + + +N DLAN IGNLV Sbjct: 299 ISKSLGNVINPFELIEEFGVDQVRYFLIKEMPVGNDGDYKRSSIINCINCDLANNIGNLV 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R+VS++ K+ G IP + DE L +L+ +R + ++ + V L S Sbjct: 359 QRTVSLLHKECRGTIPNVASSLFQDEDALPNYQEILENVRICINQYNLNGMIHIVEELSS 418 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + Y + PW+L KT+P VLY +E IR + +LLQ +P L++KI D + +++ Sbjct: 419 IANEYIAFRAPWKLSKTDPIVMQAVLYKLLEYIRCVGLLLQPIMPYLSSKILDQIALSEY 478 Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 R F + + G +L K +PIF + + Sbjct: 479 KRSFNNFAVPIDTGIILPKP-EPIFTKII 506 >gi|254456247|ref|ZP_05069676.1| methionyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] gi|207083249|gb|EDZ60675.1| methionyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] Length = 494 Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust. Identities = 220/470 (46%), Positives = 323/470 (68%), Gaps = 1/470 (0%) Query: 22 IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81 +GHAY IIAD ARF ++DG +V F TGTDEHG KI +AA+ + T F DQ S+ FR Sbjct: 1 MGHAYSSIIADFFARFKKMDGFNVYFLTGTDEHGLKIQRAAEKQNIDTLEFCDQISQTFR 60 Query: 82 DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 +++ L+++ DFIRTTE+RH T + LWK++ IY YSGWYS+ DEA+YNDDE+ Sbjct: 61 NLSKTLNLTNTDFIRTTEERHKKTVQYLWKELEKNDYIYLSKYSGWYSVSDEAFYNDDEI 120 Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201 + + + + V+W+EEE YFFRLS ++ LL YY+SHP+FI P RRNEVISFVK Sbjct: 121 ETIDENKVAISSKSKVEWIEEESYFFRLSKWEKPLLDYYKSHPDFIAPESRRNEVISFVK 180 Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 SGLKDLS+SRK+F WGIK+P++ +++YVW+DALTNYL+ + + D FWPA +H Sbjct: 181 SGLKDLSVSRKSFSWGIKVPNNNDHVIYVWLDALTNYLSALNFPNANDELFKNFWPASIH 240 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321 +IGKDILRFHA+YWPAFLL+A + LP KV+ HG+IL EK+SKS GN++DP+E+I+E G Sbjct: 241 LIGKDILRFHAVYWPAFLLAAKIELPTKVYGHGWILSDNEKMSKSKGNILDPLEIIKEYG 300 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 +D LRY+L++E++ G DG ++ L+ +N+DLAN GNL R + +K+ + IP Sbjct: 301 LDPLRYYLIKEVSFGNDGNISQERLEDCINSDLANNFGNLCQRVTAFAIKNCESKIPKQI 360 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 F + D IL+ L+ IRE + NQ I+ + +I+ + E ++YF+ Q+PW+ KK + Sbjct: 361 DFQKEDLEILNKYMNNLENIREKIDNQDINFYIDYIINSLFEANKYFNDQEPWK-KKDDQ 419 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491 R +T++Y T+E++R+++ LL +P + K I + +++ F S++ Sbjct: 420 LRLNTIVYTTLEIVRKISFLLFPIIPNSSLKALKIFNLTEKDINFSSIEN 469 >gi|228989246|ref|ZP_04149239.1| Methionyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] gi|228770456|gb|EEM19027.1| Methionyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] Length = 660 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 231/524 (44%), Positives = 345/524 (65%), Gaps = 18/524 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G DV + TGTDEHGQKI K Sbjct: 3 EENKTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH + ++K++ D+GDIY Sbjct: 63 AEELQVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKEVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGH-AVELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWGI++P +P++++YVW+D Sbjct: 182 RLLQFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + + K+WPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTDNEEKYKKYWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP TE DE++++ L++I E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVTFAQGTLKKIEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ E++RQ+AI+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDRDKLASVMAHLAEMLRQMAIMLMPFLTATP 481 Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510 +KIF L + DE +QS D G + T PIFPR Sbjct: 482 SKIFTQLGLTDE--AYQSWDSLSTIGCIPASTKVVKGQPIFPRL 523 >gi|116871573|ref|YP_848354.1| methionyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740451|emb|CAK19571.1| methionyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 665 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 231/522 (44%), Positives = 345/522 (66%), Gaps = 13/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 4 EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD+ + F+++ L+IS DFIRTT+ RH + +++++ +GDIY Sbjct: 64 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLAQGDIYL 123 Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + +EVYK +G+ + N V+ ++EE YFFR+S Y D+ Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L+ YY SHPEFILP R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPK VF HG Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +IL K K+SKS GNV+DP +IE G+DALRY+L+RE+ G DG + + RVN DL Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIERYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 363 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG IP G T+ D++++ + V++E ++M++ A Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTDFDQTLVDFKNNVVEEYEKSMEHMQFSVA 423 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L Q+ SL+S ++Y D PW L K R ++V+ E +R +A+LLQ F+ + Sbjct: 424 LNQLWSLISRTNKYIDETAPWTLAKEEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483 Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 +IF L + +EN + + S+ + G + K PIFPR Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 525 >gi|152973886|ref|YP_001373403.1| methionyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152022638|gb|ABS20408.1| methionyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98] Length = 659 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 228/524 (43%), Positives = 342/524 (65%), Gaps = 18/524 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E++ YI+T I YP+ + HIGHAY + D +AR+ R+ G DV + TGTDEHGQKI K Sbjct: 3 EEKKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +D+ + +DISYDDFIRTTE RH + ++K++ D+GDIY Sbjct: 63 AEELQVTPQAYVDDIVAGIKDLWNKMDISYDDFIRTTEDRHKEVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDDEVY-------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + ++ K G+ ++ H V+ + E YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMENGKVVGGKSPDSGH-AVELVREASYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWGI++P +P++++YVW+D Sbjct: 182 RLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENAEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K +DG IP TE DE++++ + LQ++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFDGQIPAFKEKVTEFDEALVNFATDTLQKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + +S ++Y D +PW L K DR ++V+ E++RQ +I+L F+ + Sbjct: 422 ALSSIWQFISRTNKYIDETQPWVLAKDEKDREKLASVMAHLAEMLRQTSIMLMPFLTTTS 481 Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510 KIF+ L + DE +QS + G + T PIFPR Sbjct: 482 GKIFEQLGITDE--AYQSWESLSTIGCIPTGTKVVKGQPIFPRL 523 >gi|228983294|ref|ZP_04143508.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229153817|ref|ZP_04281948.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|228629621|gb|EEK86317.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|228776408|gb|EEM24760.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 660 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 230/523 (43%), Positives = 348/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 NK+F L + DE ++ ++SL + G + K +PIFPR Sbjct: 482 NKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|218291061|ref|ZP_03495093.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1] gi|218239015|gb|EED06221.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1] Length = 650 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 231/512 (45%), Positives = 328/512 (64%), Gaps = 9/512 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + Y++T I YPN + HIGHAY + AD +AR+ RL G DV F TGTDEHG KI + A+ Sbjct: 2 KPTFYVTTPIYYPNDKLHIGHAYTTVAADAIARYKRLRGYDVFFLTGTDEHGLKIQQRAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+ K F+D +D+ LDISYDDFIRTTE RH +++++ +GDIY Sbjct: 62 QAGLEPKAFLDPIIAWIQDLWRKLDISYDDFIRTTELRHERVVEQIFERLLQQGDIYLSE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+Y+ + E+ +G Q VQ++ EE YFFR+S Y D+LL YYE + Sbjct: 122 YQGWYCTPCESYWAERELVEGKCPQC----GREVQFVREESYFFRMSKYVDRLLQYYEEN 177 Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P FI P+ R+ E+I +F++ GL+DL +SR +FDWG+ +P +P++++YVW+DAL NY++ Sbjct: 178 PGFIEPVSRKTEMIKNFIEPGLQDLCVSRTSFDWGVHVPSNPKHVVYVWLDALVNYISAI 237 Query: 243 GYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GYL + +AKF WPAD+HV+GKDI+RFHA+YWP L++ LPLPKKVF HGF L K Sbjct: 238 GYLSDDPNERAKFERYWPADVHVVGKDIVRFHAVYWPIILMALGLPLPKKVFGHGFFLVK 297 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKS GNVIDP+ +++ G DA RYFL+REI G+DG + +G+ +R+N DLAN G Sbjct: 298 GGKMSKSKGNVIDPLSLVDRYGRDAFRYFLLREIPFGQDGTFTPEGMVERLNYDLANDFG 357 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLV R+ +M+ + DG++PTPG+ T+ D ++ + + ++ ENM ALA++ + Sbjct: 358 NLVHRTAAMLNRFNDGVVPTPGSLTDVDRALRELAAEAKAKVEENMDQLQFSVALAELWN 417 Query: 420 LVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 LV ++Y D +PW+L K DR +TVLY VE IR AIL+Q F+ I + Sbjct: 418 LVRAANKYIDDCQPWKLNKEGQRDRLATVLYHMVEAIRVSAILVQPFMTDAPRAIREQFG 477 Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 DE + S + L P +P+FPR Sbjct: 478 WGDEAFAWDSAEMGLGPSGQKVAEREPLFPRL 509 >gi|229074100|ref|ZP_04207147.1| Methionyl-tRNA synthetase [Bacillus cereus Rock4-18] gi|228708994|gb|EEL61120.1| Methionyl-tRNA synthetase [Bacillus cereus Rock4-18] Length = 660 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 229/522 (43%), Positives = 346/522 (66%), Gaps = 14/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 KE + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 KENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ LQ++ + M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKNTLQKVEDAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKGENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510 +K+F L + +E ++ ++SL PG + +PIFPR Sbjct: 482 SKMFAQLGLTEEAHKSWESLSTIGCIPGGTKVEKGNPIFPRL 523 >gi|228995429|ref|ZP_04155099.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|228764290|gb|EEM13167.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock3-17] Length = 660 Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust. Identities = 229/524 (43%), Positives = 345/524 (65%), Gaps = 18/524 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G DV + TGTDEHGQKI K Sbjct: 3 EENKTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT++ +VD +++ + +DISYDDFIRTTE RH + ++K++ D+GDIY Sbjct: 63 AEELQVTSQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKEVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGH-AVELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWGI++P +P++++YVW+D Sbjct: 182 RLLQFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + + K+WPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTDNEEKYKKYWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVTFAQDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ E++RQ+ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDRDKLASVMAHLAEMLRQMGIMLMPFLTATP 481 Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510 +KIF L + DE +QS D G + T PIFPR Sbjct: 482 SKIFTQLGLTDE--AYQSWDSLSTIGCIPASTKVVKGQPIFPRL 523 >gi|229542295|ref|ZP_04431355.1| methionyl-tRNA synthetase [Bacillus coagulans 36D1] gi|229326715|gb|EEN92390.1| methionyl-tRNA synthetase [Bacillus coagulans 36D1] Length = 655 Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust. Identities = 230/516 (44%), Positives = 339/516 (65%), Gaps = 11/516 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++R+ YI+T I YP+ HIGHAY + D +AR+ RL G DV+F TGTDEHGQKI + Sbjct: 3 EKRKTFYITTPIYYPSGNLHIGHAYTTVAGDAMARYKRLRGFDVMFLTGTDEHGQKIQRK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ GVT + +VD+ +D+ L+IS DDFIRTT+ RH ++KK+ D+GDIY Sbjct: 63 AKEKGVTPQQYVDEIVAGIQDLWKKLEISNDDFIRTTQDRHKKAVEKIFKKLLDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 G Y GWY E+++ + ++ DG+ + PV+ ++EE YFF++ Y D+LL YYE Sbjct: 123 GEYEGWYCTPCESFFTERQL---VDGKCPDCGR-PVEKVKEESYFFKMGKYVDRLLQYYE 178 Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 +P+FI P R+NE+I+ F+K GL+DL++SR TFDWGIK+P DP++++YVWIDALTNY+T Sbjct: 179 ENPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALTNYIT 238 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY + D + K+WPAD+H++GK+I+RFH IYWP L++ LPLPKKVF+HG++L K Sbjct: 239 ALGYGSDDDSNYRKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFAHGWLLMKD 298 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKS GNVIDP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N DLAN +GN Sbjct: 299 GKMSKSKGNVIDPVTLIDRYGLDALRYYLLREVPFGADGIFTPEGFVERINFDLANDLGN 358 Query: 361 LVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 L++R+++M+ + +DG+IPT G+ +++ +++ + M+N ALA + Sbjct: 359 LLNRTIAMMNQYFDGVIPTFAGSHNPYSIQLVTAYKEAVKKYEDAMENMQFSVALASLWE 418 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 VS ++Y D PW L K RA + V+ E +R +AILLQ F+ KIFD L Sbjct: 419 FVSRTNKYIDETTPWTLAKDETKRADLAEVMVHLAESLRHIAILLQPFLTSTPKKIFDQL 478 Query: 478 FVADEN-RCFQSLD--QRLKPGFMLHKTFDPIFPRF 510 + DE+ ++SL + G + K PIFPR Sbjct: 479 NITDESLHTWESLSLFGSIPEGTKVVKKGKPIFPRL 514 >gi|16799293|ref|NP_469561.1| methionyl-tRNA synthetase [Listeria innocua Clip11262] gi|25009380|sp|Q92F90|SYM_LISIN RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|16412635|emb|CAC95449.1| methionyl-tRNA synthetase [Listeria innocua Clip11262] Length = 664 Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust. Identities = 231/522 (44%), Positives = 344/522 (65%), Gaps = 13/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 3 EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD+ + F+++ L+IS DFIRTT+ RH + +++++ ++GDIY Sbjct: 63 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + +EVYK +G+ + N V+ ++EE YFFR+S Y D+ Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L+ YY SHPEFILP R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPK VF HG Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +IL K K+SKS GNV+DP +I+ G+DALRY+L+RE+ G DG + + RVN DL Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG IP G TE D++++ + V++E +M + A Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L Q+ SL+S ++Y D PW L K R ++V+ E +R +A+LLQ F+ + Sbjct: 423 LNQLWSLISRTNKYIDETAPWALAKEEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 482 Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 +IF L + +EN + + S+ + G + K PIFPR Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPEGTTVVKKGTPIFPRL 524 >gi|229094760|ref|ZP_04225766.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-29] gi|229100827|ref|ZP_04231642.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|229113713|ref|ZP_04243149.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228669710|gb|EEL25116.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228682594|gb|EEL36656.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228688628|gb|EEL42500.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-29] Length = 660 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 229/522 (43%), Positives = 346/522 (66%), Gaps = 14/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 KE + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 KENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ LQ++ + M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLQKVEDAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510 +K+F L + +E ++ ++SL PG + +PIFPR Sbjct: 482 SKMFAQLGLTEEAHKSWESLSTIGCIPGGTKVEKGNPIFPRL 523 >gi|313621117|gb|EFR92184.1| methionyl-tRNA synthetase [Listeria innocua FSL S4-378] Length = 657 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 231/522 (44%), Positives = 344/522 (65%), Gaps = 13/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 4 EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD+ + F+++ L+IS DFIRTT+ RH + +++++ ++GDIY Sbjct: 64 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 123 Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + +EVYK +G+ + N V+ ++EE YFFR+S Y D+ Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L+ YY SHPEFILP R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPK VF HG Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +IL K K+SKS GNV+DP +I+ G+DALRY+L+RE+ G DG + + RVN DL Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 363 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG IP G TE D++++ + V++E +M + A Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 423 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L Q+ SL+S ++Y D PW L K R ++V+ E +R +A+LLQ F+ + Sbjct: 424 LNQLWSLISRTNKYIDETAPWALAKEEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483 Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 +IF L + +EN + + S+ + G + K PIFPR Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPEGTTVVKKGTPIFPRL 525 >gi|206900100|ref|YP_002251787.1| methionyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12] gi|206739203|gb|ACI18261.1| methionyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12] Length = 628 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 221/471 (46%), Positives = 311/471 (66%), Gaps = 5/471 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K YI+T I Y N++PHIG Y I+AD ARF+RL DV F TG DEHGQK+A+ AQ Sbjct: 2 RNKFYITTPIYYSNSEPHIGTVYTTIVADTFARFYRLKDYDVFFLTGLDEHGQKLARTAQ 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G + +VD ++ F + + I+ DDFIRTT+KRH + + +++K+ D+G +YKG Sbjct: 62 EKGYMPQEYVDMMAQKFLETWKKIGITNDDFIRTTQKRHEEVVQKVFQKLYDEGYLYKGS 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWY E ++ ++++ G + PV+W+EEE Y+F+LSA+ + LL Y E H Sbjct: 122 YAGWYCTPCETFWQKEDLHDGN----CPSCGRPVEWLEEETYYFKLSAFAEPLLKYIEEH 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 PEF+ P RRNEVISF+KSGLKD+S +R T WG+ +P DP++ +YVW DAL NY++ G Sbjct: 178 PEFVYPETRRNEVISFIKSGLKDISATRTTVKWGVPVPFDPKHTVYVWFDALVNYISALG 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 YL N D ++WPAD+H+IGKDILRFHAI WPA L++ N+PLPK V +HGF KG KI Sbjct: 238 YLTNDDTKFKRYWPADIHLIGKDILRFHAIIWPAILMALNIPLPKTVLAHGFWTIKGGKI 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GN +DP E+I GVDALRYFL+RE+ G DG Y + +R ++DLAN +GNLV+ Sbjct: 298 SKSKGNRVDPHELINLYGVDALRYFLLREVPLGLDGEYSDEAFHRRYHSDLANDLGNLVN 357 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R +++ K +G +P P F E D +L V ++ E M N AL Q+ ++ E Sbjct: 358 RVLTVAEKYTEGKVPEPKEFKEEDTYLLQKGEDVANKVEEAMANFNPANALTQIWEVIQE 417 Query: 424 VDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +RY D Q PW L + + DR +TV+Y +E +R+++I+L AF+P A +I Sbjct: 418 ANRYIDQQAPWNLASSGDNDRLNTVIYTLLETLRKISIMLYAFIPNTAEEI 468 >gi|304315621|ref|YP_003850766.1| methionyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777123|gb|ADL67682.1| methionyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 636 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 227/506 (44%), Positives = 331/506 (65%), Gaps = 6/506 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI++ I YP+ + HIGH+Y + AD +ARF RL G DV+F TGTDEHGQKI + A+ G Sbjct: 5 FYITSPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVMFLTGTDEHGQKIQRKAKEKG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K +VD+ +D+ +DIS D FIRTT+K+H + + ++ K+ +KGDIYK Y G Sbjct: 65 VTPKQYVDEIVAWIKDLWKTMDISNDKFIRTTDKQHEEIVQKIFTKLYEKGDIYKSEYEG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WY E ++ + ++ DG + PV+ ++EE YFF+LS Y DKLL YYE HP+F Sbjct: 125 WYCTPCETFWTEKQL---VDGNCPDCGR-PVELVKEESYFFKLSNYADKLLKYYEEHPDF 180 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P R NE++SF+KSGL+DL +SR +FDWG+K+P DP++++YVWIDAL+NY+T GY Sbjct: 181 IQPESRLNEMVSFIKSGLEDLCVSRTSFDWGVKVPFDPKHVVYVWIDALSNYITALGYST 240 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 + D K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ G K+SKS Sbjct: 241 DHDEDFKKYWPADVHLVGKEIVRFHTIIWPAMLMALDLPLPKKVFGHGWLILDGGKMSKS 300 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNV+DP E++ + GVDA+RYFL+RE+ G DG + + L R+N+DLAN GNL+SR+V Sbjct: 301 KGNVVDPKELVSKYGVDAIRYFLLREVPFGADGVFSNEALISRINSDLANDFGNLLSRTV 360 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +M+ K +DG++P D+ ++S+ + + + + M ALA++ LV ++ Sbjct: 361 TMVEKYFDGVVPEASDKDNVDDELISIANDLPKIVEGYMDRLQFSNALAEIWKLVGRANK 420 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 Y D PW L K + R VLY VE +R +A+L+ F+P KI++ L + D+ R Sbjct: 421 YIDETMPWVLAKDESKKGRLKAVLYNLVESLRFVAVLITPFMPNTPIKIYEQLGIDDDLR 480 Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRF 510 + SL L K + IFPR Sbjct: 481 TWASLKFGLLKAGTKVKRGENIFPRI 506 >gi|229003043|ref|ZP_04160900.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228758201|gb|EEM07389.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock1-4] Length = 627 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 229/524 (43%), Positives = 345/524 (65%), Gaps = 18/524 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G DV + TGTDEHGQKI K Sbjct: 3 EENKTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT++ +VD +++ + +DISYDDFIRTTE RH + ++K++ D+GDIY Sbjct: 63 AEELQVTSQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKEVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGH-AVELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWGI++P +P++++YVW+D Sbjct: 182 RLLQFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + + K+WPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTDNEEKYKKYWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVTFAQDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ E++RQ+ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDRDKLASVMAHLAEMLRQMGIMLMPFLTATP 481 Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510 +KIF L + DE +QS D G + T PIFPR Sbjct: 482 SKIFTQLGLTDE--AYQSWDSLSTIGCIPASTKVVKGQPIFPRL 523 >gi|226222806|ref|YP_002756913.1| methionyl-tRNA synthetase [Listeria monocytogenes Clip81459] gi|254992034|ref|ZP_05274224.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-064] gi|225875268|emb|CAS03965.1| methionyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 664 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 231/522 (44%), Positives = 344/522 (65%), Gaps = 13/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 3 EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD+ + F+++ L+IS DFIRTT+ RH + +++++ ++GDIY Sbjct: 63 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + +EVYK +G+ + N V+ ++EE YFFR+S Y D+ Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L+ YY SHPEFILP R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPK VF HG Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +IL K K+SKS GNV+DP +I+ G+DALRY+L+RE+ G DG + + RVN DL Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG IP G TE D++++ + V++E +M + A Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L Q+ SL+S ++Y D PW L K R ++V+ E +R +A+LLQ F+ + Sbjct: 423 LNQLWSLISRTNKYIDETAPWTLAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 482 Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 +IF L + +EN + + S+ + G + K PIFPR Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 524 >gi|254825910|ref|ZP_05230911.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|254853705|ref|ZP_05243053.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|255519716|ref|ZP_05386953.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-175] gi|300764921|ref|ZP_07074910.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|258607084|gb|EEW19692.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|293595148|gb|EFG02909.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|300514408|gb|EFK41466.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] Length = 664 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 231/522 (44%), Positives = 344/522 (65%), Gaps = 13/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 3 EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD+ + F+++ L+IS DFIRTT+ RH + +++++ ++GDIY Sbjct: 63 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + +EVYK +G+ + N V+ ++EE YFFR+S Y D+ Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L+ YY SHPEFILP R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPK VF HG Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +IL K K+SKS GNV+DP +I+ G+DALRY+L+RE+ G DG + + RVN DL Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG IP G TE D++++ + V++E +M + A Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L Q+ SL+S ++Y D PW L K R ++V+ E +R +A+LLQ F+ + Sbjct: 423 LNQLWSLISRTNKYIDETAPWTLAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 482 Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 +IF L + +EN + + S+ + G + K PIFPR Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 524 >gi|46906409|ref|YP_012798.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 4b F2365] gi|67461803|sp|Q724N6|SYM_LISMF RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|46879673|gb|AAT02975.1| methionyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] Length = 665 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 231/522 (44%), Positives = 344/522 (65%), Gaps = 13/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 4 EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD+ + F+++ L+IS DFIRTT+ RH + +++++ ++GDIY Sbjct: 64 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 123 Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + +EVYK +G+ + N V+ ++EE YFFR+S Y D+ Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L+ YY SHPEFILP R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPK VF HG Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +IL K K+SKS GNV+DP +I+ G+DALRY+L+RE+ G DG + + RVN DL Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDL 363 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG IP G TE D++++ + V++E +M + A Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 423 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L Q+ SL+S ++Y D PW L K R ++V+ E +R +A+LLQ F+ + Sbjct: 424 LNQLWSLISRTNKYIDETAPWTLAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483 Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 +IF L + +EN + + S+ + G + K PIFPR Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 525 >gi|254933016|ref|ZP_05266375.1| methionyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|293584575|gb|EFF96607.1| methionyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|328469714|gb|EGF40636.1| methionyl-tRNA synthetase [Listeria monocytogenes 220] Length = 664 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 231/522 (44%), Positives = 344/522 (65%), Gaps = 13/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 3 EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD+ + F+++ L+IS DFIRTT+ RH + +++++ ++GDIY Sbjct: 63 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + +EVYK +G+ + N V+ ++EE YFFR+S Y D+ Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L+ YY SHPEFILP R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPK VF HG Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +IL K K+SKS GNV+DP +I+ G+DALRY+L+RE+ G DG + + RVN DL Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG IP G TE D++++ + V++E +M + A Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L Q+ SL+S ++Y D PW L K R ++V+ E +R +A+LLQ F+ + Sbjct: 423 LNQLWSLISRTNKYIDETAPWTLAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 482 Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 +IF L + +EN + + S+ + G + K PIFPR Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 524 >gi|313625533|gb|EFR95248.1| methionyl-tRNA synthetase [Listeria innocua FSL J1-023] Length = 655 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 231/522 (44%), Positives = 344/522 (65%), Gaps = 13/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 4 EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD+ + F+++ L+IS DFIRTT+ RH + +++++ ++GDIY Sbjct: 64 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 123 Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + +EVYK +G+ + N V+ ++EE YFFR+S Y D+ Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L+ YY SHPEFILP R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPK VF HG Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +IL K K+SKS GNV+DP +I+ G+DALRY+L+RE+ G DG + + RVN DL Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 363 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG IP G TE D++++ + V++E +M + A Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 423 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L Q+ SL+S ++Y D PW L K R ++V+ E +R +A+LLQ F+ + Sbjct: 424 LNQLWSLISRTNKYIDETAPWALAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483 Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 +IF L + +EN + + S+ + G + K PIFPR Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPEGTTVVKKGTPIFPRL 525 >gi|218895174|ref|YP_002443585.1| methionyl-tRNA synthetase [Bacillus cereus G9842] gi|218546007|gb|ACK98401.1| methionyl-tRNA synthetase [Bacillus cereus G9842] Length = 660 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 228/523 (43%), Positives = 348/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL + LVS ++Y D +PW L K DR ++V+ EV+RQ+ I+L F+ Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQIGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE ++ ++SL + G + K +PIFPR Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|299820707|ref|ZP_07052596.1| methionine--tRNA ligase [Listeria grayi DSM 20601] gi|299817728|gb|EFI84963.1| methionine--tRNA ligase [Listeria grayi DSM 20601] Length = 663 Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust. Identities = 230/522 (44%), Positives = 343/522 (65%), Gaps = 13/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 KE+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 3 KEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD+ + F+++ L+IS DFIRTT++RH + +++++ ++GDIY Sbjct: 63 AKEQGISEQQYVDEVAEGFQELWKKLEISNTDFIRTTQERHKTGVQAIFERLVEQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + EVY+ G+ + N V+ ++EE YFFR+S Y D+ Sbjct: 123 GEYEGWYSVSDEEYFTETQLAEVYRDEAGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L+ YY SHPEFILP R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK +F HG Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVHIVGKEIIRFHTIYWPIILMALDLPLPKMIFGHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +IL K K+SKS GNV+DP +I+ G+DALRY+L+RE+ G DG + + RVN DL Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG IP G T D+++ + V +E +NM++ A Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGDVTPFDDALRTFKDDVAKEYEKNMEHMQFSVA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 L ++ SL+S ++Y D +PW L K + ++V+ E +R +AILLQ F+ + Sbjct: 423 LTKLWSLISRTNKYIDETEPWALAKDESRKKELASVMTHLAESLRTIAILLQPFLTRAPG 482 Query: 472 KIFDILFVADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +IF L + EN + + S+ + G + K PIFPR Sbjct: 483 EIFMQLGLQAENLKKWDSIYTFGAIPDGTKVVKKGTPIFPRL 524 >gi|228963136|ref|ZP_04124306.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|228796521|gb|EEM43959.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] Length = 563 Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust. Identities = 228/523 (43%), Positives = 347/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE ++ ++SL + G + K +PIFPR Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|75759600|ref|ZP_00739686.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74492891|gb|EAO56021.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 669 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 228/523 (43%), Positives = 347/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 12 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 71 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 72 AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 131 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 132 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 190 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 191 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 250 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 251 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 310 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 311 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 370 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 371 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 430 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 431 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 490 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE ++ ++SL + G + K +PIFPR Sbjct: 491 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 532 >gi|228918989|ref|ZP_04082369.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840638|gb|EEM85899.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 660 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 228/523 (43%), Positives = 347/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNITPQAYVDNIVSGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE ++ ++SL + G + K +PIFPR Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|228898792|ref|ZP_04063075.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] gi|228860817|gb|EEN05194.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] Length = 660 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 228/523 (43%), Positives = 347/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE ++ ++SL + G + K +PIFPR Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|218235634|ref|YP_002364888.1| methionyl-tRNA synthetase [Bacillus cereus B4264] gi|218163591|gb|ACK63583.1| methionine--tRNA ligase [Bacillus cereus B4264] Length = 660 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 228/523 (43%), Positives = 347/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE ++ ++SL + G + K +PIFPR Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|289433525|ref|YP_003463397.1| Methionyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289169769|emb|CBH26305.1| metS [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313639884|gb|EFS04591.1| methionyl-tRNA synthetase [Listeria seeligeri FSL S4-171] Length = 665 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 231/522 (44%), Positives = 344/522 (65%), Gaps = 13/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 4 EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD+ + F+++ L+IS DFIRTT+ RH T +++++ ++GDIY Sbjct: 64 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKLTVEKIFEQLLEQGDIYL 123 Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + +EVYK +G+ + N V+ ++EE YFFR+S Y D+ Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L+ YY SHPEFILP R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPSNPKHVVYVWIDA 243 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPK +F HG Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMIFGHG 303 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +IL K K+SKS GNV+DP +I+ G+DALRY+L+RE+ G DG + + R+N DL Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFIDRMNYDL 363 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG IP GA T DE+++ + V+ + ++M + A Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGAVTPFDETLVDFKNNVVADYEKSMDHMQFSVA 423 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L Q+ SLVS ++Y D PW L K R ++V+ E +R +A+LLQ F+ + Sbjct: 424 LNQLWSLVSRTNKYIDETAPWALAKDEEKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483 Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 +IF L + +EN + + S+ + G + K PIFPR Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTNVVKKGTPIFPRL 525 >gi|16802223|ref|NP_463708.1| methionyl-tRNA synthetase [Listeria monocytogenes EGD-e] gi|224500370|ref|ZP_03668719.1| methionyl-tRNA synthetase [Listeria monocytogenes Finland 1988] gi|224503503|ref|ZP_03671810.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL R2-561] gi|254829268|ref|ZP_05233955.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|254832524|ref|ZP_05237179.1| methionyl-tRNA synthetase [Listeria monocytogenes 10403S] gi|254901038|ref|ZP_05260962.1| methionyl-tRNA synthetase [Listeria monocytogenes J0161] gi|254913894|ref|ZP_05263906.1| methionyl-tRNA synthetase [Listeria monocytogenes J2818] gi|254938315|ref|ZP_05270012.1| methionyl-tRNA synthetase [Listeria monocytogenes F6900] gi|255026302|ref|ZP_05298288.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-003] gi|255029121|ref|ZP_05301072.1| methionyl-tRNA synthetase [Listeria monocytogenes LO28] gi|25009372|sp|Q8YAF2|SYM_LISMO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|16409534|emb|CAC98392.1| methionyl-tRNA synthetase [Listeria monocytogenes EGD-e] gi|258601679|gb|EEW15004.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|258610927|gb|EEW23535.1| methionyl-tRNA synthetase [Listeria monocytogenes F6900] gi|293591911|gb|EFG00246.1| methionyl-tRNA synthetase [Listeria monocytogenes J2818] Length = 664 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 231/522 (44%), Positives = 343/522 (65%), Gaps = 13/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 3 EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD+ + F+++ L+IS DFIRTT+ RH + +++++ ++GDIY Sbjct: 63 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + +EVYK +G+ + N V+ ++EE YFFR+S Y D+ Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L+ YY SHPEFILP R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPK VF HG Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +IL K K+SKS GNV+DP +I+ G+DALRY+L+RE+ G DG + + RVN DL Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG IP G TE D+ ++ + V++E +M + A Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQILVDFKNNVVKEYEGSMDHMQFSVA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L Q+ SL+S ++Y D PW L K R ++V+ E +R +A+LLQ F+ + Sbjct: 423 LNQLWSLISRTNKYIDETAPWALAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 482 Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 +IF L + +EN + + S+ + G + K PIFPR Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 524 >gi|47096170|ref|ZP_00233769.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|284803084|ref|YP_003414949.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284996225|ref|YP_003417993.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|47015418|gb|EAL06352.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|284058646|gb|ADB69587.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284061692|gb|ADB72631.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5923] Length = 665 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 231/522 (44%), Positives = 343/522 (65%), Gaps = 13/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 4 EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD+ + F+++ L+IS DFIRTT+ RH + +++++ ++GDIY Sbjct: 64 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 123 Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + +EVYK +G+ + N V+ ++EE YFFR+S Y D+ Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L+ YY SHPEFILP R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPK VF HG Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +IL K K+SKS GNV+DP +I+ G+DALRY+L+RE+ G DG + + RVN DL Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDL 363 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG IP G TE D+ ++ + V++E +M + A Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQILVDFKNNVVKEYEGSMDHMQFSVA 423 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L Q+ SL+S ++Y D PW L K R ++V+ E +R +A+LLQ F+ + Sbjct: 424 LNQLWSLISRTNKYIDETAPWALAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483 Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 +IF L + +EN + + S+ + G + K PIFPR Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 525 >gi|228956480|ref|ZP_04118277.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229039943|ref|ZP_04189708.1| Methionyl-tRNA synthetase [Bacillus cereus AH676] gi|229142844|ref|ZP_04271287.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|229148448|ref|ZP_04276705.1| Methionyl-tRNA synthetase [Bacillus cereus m1550] gi|296500870|ref|YP_003662570.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|228634990|gb|EEK91562.1| Methionyl-tRNA synthetase [Bacillus cereus m1550] gi|228640607|gb|EEK96994.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|228727402|gb|EEL78594.1| Methionyl-tRNA synthetase [Bacillus cereus AH676] gi|228803170|gb|EEM49991.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|296321922|gb|ADH04850.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171] Length = 660 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 228/523 (43%), Positives = 347/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE ++ ++SL + G + K +PIFPR Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|258510147|ref|YP_003183581.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257476873|gb|ACV57192.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 650 Score = 461 bits (1187), Expect = e-128, Method: Compositional matrix adjust. Identities = 229/512 (44%), Positives = 326/512 (63%), Gaps = 9/512 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + Y++T I YPN + HIGHAY + AD +AR+ RL G DV F TGTDEHG KI + A+ Sbjct: 2 KPTFYVTTPIYYPNDKLHIGHAYTTVAADAIARYKRLRGYDVFFLTGTDEHGLKIQQRAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+ K F+D +D+ LDISYDDFIRTTE RH +++++ +GDIY Sbjct: 62 QAGLEPKAFLDPIIAWIQDLWKKLDISYDDFIRTTEARHERVVEQIFERLLQQGDIYLSE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+Y+ + E+ G Q VQ++ EE YFFR+S Y D+LL YYE + Sbjct: 122 YQGWYCTPCESYWAERELVDGKCPQC----GREVQFVREESYFFRMSKYVDRLLQYYEEN 177 Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P FI P+ R+ E+I +F++ GL+DL +SR +FDWG+ +P +P++++YVW+DAL NY++ Sbjct: 178 PGFIEPVSRKTEMIKNFIEPGLQDLCVSRTSFDWGVHVPSNPKHVVYVWLDALVNYISAI 237 Query: 243 GYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GYL + + KF WPAD+HV+GKDI+RFHA+YWP L++ LPLPKKVF HGF L K Sbjct: 238 GYLSDDADERVKFERYWPADVHVVGKDIVRFHAVYWPIILMALGLPLPKKVFGHGFFLVK 297 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKS GNVIDP+ +++ G DA RYFL+REI G+DG + +G+ +R+N DLAN G Sbjct: 298 GGKMSKSKGNVIDPLSLVDRYGRDAFRYFLLREIPFGQDGTFTPEGMVERLNYDLANDFG 357 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLV R+ +M+ + DG++P PG+ T+ D ++ + + V ++ ENM ALA++ + Sbjct: 358 NLVHRTAAMLNRFNDGVVPAPGSLTDVDRALRDLAAEVKAKVEENMDQLQFSVALAELWN 417 Query: 420 LVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 LV ++Y D +PW+L K +R +TVLY VE IR AIL+Q F+ I + Sbjct: 418 LVRAANKYIDDCQPWKLNKEGERERLATVLYHMVEAIRVSAILVQPFMTDAPKAIREQFG 477 Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 DE + S + L P +P+FPR Sbjct: 478 WGDEAFAWDSAEMGLGPSGQTVAEREPLFPRL 509 >gi|229107725|ref|ZP_04237362.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|228675698|gb|EEL30905.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-15] Length = 660 Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust. Identities = 227/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDDEVY-------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + ++ K G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVEPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE ++ ++SL + G + K +PIFPR Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|324324028|gb|ADY19288.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 660 Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust. Identities = 228/523 (43%), Positives = 347/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 KE + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 KENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAQDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + L+S ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALSSIWQLISRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + +E + ++SL + G + K +PIFPR Sbjct: 482 SKMFAQLGLTEEAHTSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|222528338|ref|YP_002572220.1| methionyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] gi|222455185|gb|ACM59447.1| methionyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] Length = 653 Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust. Identities = 234/517 (45%), Positives = 339/517 (65%), Gaps = 12/517 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E+ K YI+T I YP+ + HIGH Y + AD +AR+ RL G DV F TGTDEHGQKI + A Sbjct: 2 EKPKFYITTPIYYPSDKLHIGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 Q AG T + +VD+ + +D+ +++ISYDDFIRTTE+RH + ++ K+ ++GDIYK Sbjct: 62 QEAGKTPQEYVDEIVASIKDLWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKS 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E+++ D ++ DG+ + PV+ EE YFFRLS YQD L+ Y E Sbjct: 122 EYEGWYCTPCESFWLDRQL---VDGKCPDCGR-PVERAREESYFFRLSKYQDALVKYIEE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HP+FI+P R NE+I+ F+K GL+D+ +SR T WGI +P DP++++YVWIDAL+NY+T Sbjct: 178 HPDFIVPQSRANEMINNFIKPGLEDVCVSRTTIKWGISVPFDPKHVIYVWIDALSNYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY+ D K+WPAD+H++GK+I+RFH I WPA L++ LPLPK VF HG++L +G Sbjct: 238 LGYMSEDDSKFKKYWPADVHLVGKEIVRFHTIIWPAILMALGLPLPKMVFGHGWLLLEGG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ + ++ GVD+LRYFL+REI G DG + +D L+ R N+DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVILAQKYGVDSLRYFLLREIPFGADGHFSEDSLRTRHNSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 +SR+V+MI K +DG+I P A + D ++++ V +++ + AL ++ L+ Sbjct: 358 LSRTVAMIEKYFDGIIHLPEAKEDLDNELITLAKEVYEKVCRCLDELQFSNALIEIWKLI 417 Query: 422 SEVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + ++Y D PW L K+ R TVLY EV+R +AIL++ F+P+ KI L + Sbjct: 418 ARANKYIDETMPWVLGRDKSKYPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKILQQLGI 477 Query: 480 A-DEN---RCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511 + DEN ++S Q L P K DPIFPR + Sbjct: 478 SKDENPDITTWESASQFSLIPEGTKVKRGDPIFPRIV 514 >gi|229027885|ref|ZP_04184040.1| Methionyl-tRNA synthetase [Bacillus cereus AH1271] gi|228733399|gb|EEL84226.1| Methionyl-tRNA synthetase [Bacillus cereus AH1271] Length = 660 Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust. Identities = 229/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAQDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510 +K+F L + DE ++ ++SL + G + K PIFPR Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTVGCIPAGTKVEKG-QPIFPRL 523 >gi|229159212|ref|ZP_04287237.1| Methionyl-tRNA synthetase [Bacillus cereus R309803] gi|228624227|gb|EEK81028.1| Methionyl-tRNA synthetase [Bacillus cereus R309803] Length = 660 Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust. Identities = 229/523 (43%), Positives = 345/523 (65%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVSGIKELWKKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAYKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDESDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE ++ ++SL + G + K PIFPR Sbjct: 482 SKMFAQLGLTDEAHKSWESLSAIGCIPAGTKVEKG-QPIFPRL 523 >gi|229165027|ref|ZP_04292823.1| Methionyl-tRNA synthetase [Bacillus cereus AH621] gi|228618412|gb|EEK75441.1| Methionyl-tRNA synthetase [Bacillus cereus AH621] Length = 660 Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust. Identities = 231/525 (44%), Positives = 347/525 (66%), Gaps = 17/525 (3%) Query: 1 MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 MKE K YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI Sbjct: 1 MKEENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQ 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 K A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDI Sbjct: 61 KKAEELNVTPQAYVDNIVSGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDI 120 Query: 120 YKGCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y Y GWYS++DE +Y D + +G G+ ++ H V+ + EE YFFR+ Y Sbjct: 121 YLDEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGH-AVELVREESYFFRMGKY 179 Query: 173 QDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231 D+LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW Sbjct: 180 VDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVW 239 Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291 +DAL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF Sbjct: 240 VDALSNYITALGYGTENEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVF 299 Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 +HG+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N Sbjct: 300 AHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERIN 359 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLI 410 DLAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 360 FDLANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEF 419 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPK 468 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 420 SVALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTV 479 Query: 469 LANKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + +E ++ ++SL + G + K +PIFPR Sbjct: 480 APSKMFAQLGLTEEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|300119133|ref|ZP_07056834.1| methionyl-tRNA synthetase [Bacillus cereus SJ1] gi|298723455|gb|EFI64196.1| methionyl-tRNA synthetase [Bacillus cereus SJ1] Length = 660 Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust. Identities = 229/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE + ++SL + G + K PIFPR Sbjct: 482 SKMFAQLGLTDEAHTSWESLSTIGCIPAGTKVEKG-QPIFPRL 523 >gi|163938046|ref|YP_001642930.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|229009548|ref|ZP_04166775.1| Methionyl-tRNA synthetase [Bacillus mycoides DSM 2048] gi|229053885|ref|ZP_04195320.1| Methionyl-tRNA synthetase [Bacillus cereus AH603] gi|229131046|ref|ZP_04259959.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|163860243|gb|ABY41302.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|228652383|gb|EEL08307.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|228721426|gb|EEL72946.1| Methionyl-tRNA synthetase [Bacillus cereus AH603] gi|228751692|gb|EEM01491.1| Methionyl-tRNA synthetase [Bacillus mycoides DSM 2048] Length = 660 Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust. Identities = 231/525 (44%), Positives = 347/525 (66%), Gaps = 17/525 (3%) Query: 1 MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 MKE K YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI Sbjct: 1 MKEENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQ 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 K A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDI Sbjct: 61 KKAEELNVTPQAYVDNIVSGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDI 120 Query: 120 YKGCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y Y GWYS++DE +Y D + +G G+ ++ H V+ + EE YFFR+ Y Sbjct: 121 YLDEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGH-AVELVREESYFFRMGKY 179 Query: 173 QDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231 D+LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW Sbjct: 180 VDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVW 239 Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291 +DAL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF Sbjct: 240 VDALSNYITALGYGTENEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVF 299 Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 +HG+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N Sbjct: 300 AHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERIN 359 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLI 410 DLAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 360 FDLANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEF 419 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPK 468 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 420 SVALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTV 479 Query: 469 LANKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + +E ++ ++SL + G + K +PIFPR Sbjct: 480 APSKMFAQLGLTEEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|322382808|ref|ZP_08056652.1| methionyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153277|gb|EFX45723.1| methionyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 659 Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust. Identities = 226/514 (43%), Positives = 343/514 (66%), Gaps = 13/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ Y++T I YP+ + HIGHAY + D LAR+ RL G DV++ TGTDEHGQKI + A+ Sbjct: 5 KKTFYLTTPIYYPSDKLHIGHAYTTVAGDALARYKRLRGYDVMYLTGTDEHGQKIERKAK 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + FVD +++ +DISYDDFIRTTE RH ++ +++ ++ ++GDIY G Sbjct: 65 EKGMTPQAFVDNIVAGIKELWGKMDISYDDFIRTTEDRHKESVSVIFARLMEQGDIYLGE 124 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+++ ++++ ADG+ + PV+ M+EE YFFR+S Y D+LL YYE + Sbjct: 125 YEGWYCTSCESFFPENKL---ADGKCPDC-GGPVEKMKEESYFFRMSKYADRLLQYYEEN 180 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI P R+NE+I+ F+K GL+DL++SR TFDWG+K+P+DP++++YVWIDAL+NY++ Sbjct: 181 PDFIQPESRKNEMINNFIKPGLEDLAVSRATFDWGVKVPNDPKHVIYVWIDALSNYISAL 240 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY K+WPAD+H++GK+I+RFH IYWP L++ LPLPKKVF HG++L K K Sbjct: 241 GYGTKDSSKFDKYWPADVHLVGKEIIRFHTIYWPIMLMAMGLPLPKKVFGHGWLLMKDGK 300 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ +I+ G+DALRYFL+RE+ G DG + + +R+N DLAN +GNL+ Sbjct: 301 MSKSKGNVVDPVTLIDRYGLDALRYFLLREVPFGADGQFTPESFVERINHDLANDLGNLL 360 Query: 363 SRSVSMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 +R+V M++K +DG + PGA TE D +L + + E M+N AL+ + +L Sbjct: 361 NRTVVMMMKYFDGKLQVYVPGA-TEYDADLLKTMEGSISKYEEAMENLEFSVALSALWTL 419 Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + ++Y D +PW L K+ + +V+YV E+ R ++ILLQ FV + K++ L + Sbjct: 420 IGRANKYIDETQPWVLAKEGKTETLGSVMYVLAEIQRIISILLQPFVTQTPAKMWSSLGI 479 Query: 480 AD-ENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 + E + S+ +L G + KT DP+FPR Sbjct: 480 REGEMTTWDSIYTFGKLPAGTQVKKT-DPMFPRL 512 >gi|118475810|ref|YP_892961.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|118415035|gb|ABK83454.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] Length = 669 Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust. Identities = 229/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 12 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 71 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 72 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 131 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 132 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 190 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 191 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 250 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 251 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 310 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 311 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 370 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 371 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 430 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 431 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 490 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE + ++SL + G + K PIFPR Sbjct: 491 SKMFAQLGLTDEAHTSWESLSTIGCIPAGTKVEKG-QPIFPRL 532 >gi|229015441|ref|ZP_04172443.1| Methionyl-tRNA synthetase [Bacillus cereus AH1273] gi|229021646|ref|ZP_04178233.1| Methionyl-tRNA synthetase [Bacillus cereus AH1272] gi|228739649|gb|EEL90058.1| Methionyl-tRNA synthetase [Bacillus cereus AH1272] gi|228745860|gb|EEL95860.1| Methionyl-tRNA synthetase [Bacillus cereus AH1273] Length = 660 Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust. Identities = 227/523 (43%), Positives = 347/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVSGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ E++RQ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEILRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + +E ++ ++SL + G + K +PIFPR Sbjct: 482 SKMFAQLGLTEEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|229170889|ref|ZP_04298492.1| Methionyl-tRNA synthetase [Bacillus cereus MM3] gi|228612555|gb|EEK69774.1| Methionyl-tRNA synthetase [Bacillus cereus MM3] Length = 660 Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust. Identities = 227/523 (43%), Positives = 348/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGEKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKK+F+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKIFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALSSIWQLVSRANKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + +E ++ ++SL + G + K +PIFPR Sbjct: 482 SKMFAQLGLTEEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|196041780|ref|ZP_03109070.1| methionine--tRNA ligase [Bacillus cereus NVH0597-99] gi|196027400|gb|EDX66017.1| methionine--tRNA ligase [Bacillus cereus NVH0597-99] Length = 660 Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust. Identities = 229/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKIVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE + ++SL + G + K PIFPR Sbjct: 482 SKMFAQLGLTDEAHTSWESLSTIGCIPAGTKVEKG-QPIFPRL 523 >gi|196047404|ref|ZP_03114617.1| methionyl-tRNA synthetase [Bacillus cereus 03BB108] gi|225862090|ref|YP_002747468.1| methionyl-tRNA synthetase [Bacillus cereus 03BB102] gi|229182433|ref|ZP_04309685.1| Methionyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|196021806|gb|EDX60500.1| methionyl-tRNA synthetase [Bacillus cereus 03BB108] gi|225788827|gb|ACO29044.1| methionine--tRNA ligase [Bacillus cereus 03BB102] gi|228601013|gb|EEK58581.1| Methionyl-tRNA synthetase [Bacillus cereus BGSC 6E1] Length = 660 Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust. Identities = 229/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE + ++SL + G + K PIFPR Sbjct: 482 SKMFAQLGLTDEAHTSWESLSTIGCIPAGTKVEKG-QPIFPRL 523 >gi|196250752|ref|ZP_03149439.1| methionyl-tRNA synthetase [Geobacillus sp. G11MC16] gi|196209702|gb|EDY04474.1| methionyl-tRNA synthetase [Geobacillus sp. G11MC16] Length = 650 Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust. Identities = 227/516 (43%), Positives = 337/516 (65%), Gaps = 14/516 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E++ Y++T I YP+ + HIGHAY + D LAR+ R+ G DV++ TGTDEHGQKI + A Sbjct: 2 EKKTFYLTTPIYYPSDKLHIGHAYTTVAGDTLARYKRMRGYDVMYLTGTDEHGQKIQRKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + GVT + +VD+ +++ LDISYDDFIRTT++RH ++ ++ ++GDIY G Sbjct: 62 EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEKIFARLVEQGDIYLG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E++Y + ++ DG + PV+ ++E+ YFFR+S Y D+LL YYE Sbjct: 122 EYEGWYCTPCESFYTERQL---VDGNCPDC-GRPVEKVKEQSYFFRMSKYVDRLLQYYEE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +P+FI P R+NE+I+ F+K GL+DL++SR TFDWGIK+P DP++++YVWIDAL NY+T Sbjct: 178 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALANYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF HG++L K Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIIRFHTIYWPIMLMALDLPLPKKVFGHGWLLMKDG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFIERINYDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 ++R+V+MI K +DG+IP G T DE ++ V+++ E M+ ALA V L Sbjct: 358 LNRTVAMIKKYFDGVIPPYRGPKTPFDEELVQTAREVVRQYEEAMERMEFSVALASVWQL 417 Query: 421 VSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 + ++Y D +PW L K R ++V+ E +R A+LLQ F+ + +IF L Sbjct: 418 IGRTNKYIDETQPWVLAKDESKREELASVMTHLAESLRHTAVLLQPFLTRTPERIFAQLG 477 Query: 479 VADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510 +AD R + D + G + T +P+FPR Sbjct: 478 IAD--RSLKEWDSLYEFGLIPEGTNVQKGEPLFPRL 511 >gi|206972593|ref|ZP_03233536.1| methionyl-tRNA synthetase [Bacillus cereus AH1134] gi|229176639|ref|ZP_04304044.1| Methionyl-tRNA synthetase [Bacillus cereus 172560W] gi|229188324|ref|ZP_04315373.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|206732495|gb|EDZ49674.1| methionyl-tRNA synthetase [Bacillus cereus AH1134] gi|228595123|gb|EEK52893.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|228606806|gb|EEK64222.1| Methionyl-tRNA synthetase [Bacillus cereus 172560W] Length = 660 Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust. Identities = 227/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVAFAQDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE ++ ++SL + G + K +PIFPR Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|138893709|ref|YP_001124162.1| methionine-tRNA ligase/methionyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] gi|134265222|gb|ABO65417.1| Methionine-tRNA ligase/methionyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] Length = 650 Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust. Identities = 227/516 (43%), Positives = 337/516 (65%), Gaps = 14/516 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E++ Y++T I YP+ + HIGHAY + D LAR+ R+ G DV++ TGTDEHGQKI + A Sbjct: 2 EKKTFYLTTPIYYPSDKLHIGHAYTTVAGDTLARYKRMRGYDVMYLTGTDEHGQKIQRKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + GVT + +VD+ +++ LDISYDDFIRTT++RH ++ ++ ++GDIY G Sbjct: 62 EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEKIFARLVEQGDIYLG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E++Y + ++ DG + PV+ ++E+ YFFR+S Y D+LL YYE Sbjct: 122 EYEGWYCTPCESFYTERQL---VDGNCPDCGR-PVEKVKEQSYFFRMSKYVDRLLQYYEE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +P+FI P R+NE+I+ F+K GL+DL++SR TFDWGIK+P DP++++YVWIDAL NY+T Sbjct: 178 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALANYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF HG++L K Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIIRFHTIYWPIMLMALDLPLPKKVFGHGWLLMKDG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFIERINYDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 ++R+V+MI K +DG+IP G T DE ++ V+++ E M+ ALA V L Sbjct: 358 LNRTVAMIKKYFDGVIPPYRGPKTPFDEELVQTAREVVRQYEEAMERMEFSVALASVWQL 417 Query: 421 VSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 + ++Y D +PW L K R ++V+ E +R A+LLQ F+ + +IF L Sbjct: 418 IGRTNKYIDETQPWVLAKDESKREELASVMTHLAESLRHTAVLLQPFLTRTPERIFAQLG 477 Query: 479 VADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510 +AD R + D + G + T +P+FPR Sbjct: 478 IAD--RSLKEWDSLYEFGLIPEGTNVQKGEPLFPRL 511 >gi|228905835|ref|ZP_04069733.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 200] gi|228853775|gb|EEM98534.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 200] Length = 660 Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust. Identities = 227/523 (43%), Positives = 347/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + +E ++ ++SL + G + K +PIFPR Sbjct: 482 SKMFAQLGLTNEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|134297944|ref|YP_001111440.1| methionyl-tRNA synthetase [Desulfotomaculum reducens MI-1] gi|134050644|gb|ABO48615.1| methionyl-tRNA synthetase [Desulfotomaculum reducens MI-1] Length = 518 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 225/510 (44%), Positives = 332/510 (65%), Gaps = 7/510 (1%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ YI+T I YP+ HIGHAY + AD +AR+ RL G DV F TG+DEHGQKI +AA Sbjct: 4 KKPNFYITTPIYYPSDNLHIGHAYTTVAADTMARYKRLTGYDVWFLTGSDEHGQKIERAA 63 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 +N T K +VD F+ + + LD+SY+DFIRTT++RHH + ++++ D+GDIYK Sbjct: 64 KNKNQTPKEYVDHIVSGFKKLWERLDVSYNDFIRTTDERHHKVVQKFFQQLFDQGDIYKS 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E ++ + Y+ A+G+ + Q V+ + EE YFFR S Y ++ L + E Sbjct: 124 EYEGWYCTPCETFFTE---YQLAEGKCPDCQRE-VEKVREESYFFRQSKYAERWLKFIEE 179 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 +PEFI P+ RRNE++SFVK GL+DL +SR TFDWGI++P DP++++YVW+DALTNY++ Sbjct: 180 NPEFIQPVSRRNEMVSFVKQGLEDLCVSRTTFDWGIRVPFDPKHVVYVWVDALTNYISAL 239 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY + KFWPAD+H++ KDI+RFHAI WP L++ +LPLPKKV +HG++L K Sbjct: 240 GYDTGDNSLFQKFWPADIHLMAKDIVRFHAIIWPILLMALDLPLPKKVIAHGWLLLDSGK 299 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP +I++ GVDA+RYFL+RE+ G DG Y ++ L KR+N DLAN GNL+ Sbjct: 300 MSKSKGNVVDPHVLIDKYGVDAVRYFLLRELPFGSDGLYSEEALVKRINTDLANDYGNLL 359 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SRS +M+ K G++ TPGA DE ++ + + + + E M+ + ALA + +V Sbjct: 360 SRSATMMEKYQQGVLQTPGAPEGPDEELIDLATATPKLVEEYMEKSELSNALAAIWQMVG 419 Query: 423 EVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++Y + PW L K N +R +TVLY EV+R I++ F+P+L +++ L + D Sbjct: 420 RANKYLEETAPWTLAKNNETERLNTVLYNVAEVMRFATIMITPFMPQLPKRVWPQLGIED 479 Query: 482 ENR--CFQSLDQRLKPGFMLHKTFDPIFPR 509 + ++SL P K + +FPR Sbjct: 480 QTEIHTWESLRWGKLPVGTTVKRGEVLFPR 509 >gi|228937341|ref|ZP_04099988.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970227|ref|ZP_04130887.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228976797|ref|ZP_04137210.1| Methionyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228782893|gb|EEM31058.1| Methionyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228789462|gb|EEM37381.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228822299|gb|EEM68280.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326937830|gb|AEA13726.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis CT-43] Length = 660 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 228/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRIVAMIDKYFNGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE ++ ++SL + G + K +PIFPR Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|217957614|ref|YP_002336156.1| methionyl-tRNA synthetase [Bacillus cereus AH187] gi|229136885|ref|ZP_04265513.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|217064186|gb|ACJ78436.1| methionyl-tRNA synthetase [Bacillus cereus AH187] gi|228646550|gb|EEL02756.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST26] Length = 660 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 229/523 (43%), Positives = 343/523 (65%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 KE + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 KENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADENR-CFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE + SL + G + K PIFPR Sbjct: 482 SKMFAQLGLTDEAHISWGSLSTIGCIPAGTKVEKG-QPIFPRL 523 >gi|229083353|ref|ZP_04215709.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-44] gi|228699960|gb|EEL52589.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-44] Length = 660 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 228/525 (43%), Positives = 345/525 (65%), Gaps = 20/525 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E++ YI+T I YP+ + HIGHAY + D +AR+ R+ G DV + TGTDEHGQKI K Sbjct: 3 EEKKTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH + ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKEVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGH-AVELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLQFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + + K+WPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTDNEEKYKKYWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K +DG IP TE D+++++ +L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFDGEIPAFKENVTEFDQTLVAFAQDILKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILLQAFVPKL 469 AL+ + LVS ++Y D +PW L K DR AS + ++ E++RQ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDRDKLASAMAHLA-EMLRQTGIMLMPFLTAT 480 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510 +KIF L + DE + S D G + T PIFPR Sbjct: 481 PSKIFTQLGLTDE--AYHSWDSLSTIGCIPAGTKVVKGQPIFPRL 523 >gi|229067803|ref|ZP_04201121.1| Methionyl-tRNA synthetase [Bacillus cereus F65185] gi|228715287|gb|EEL67145.1| Methionyl-tRNA synthetase [Bacillus cereus F65185] Length = 660 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 227/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVAFAQDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE ++ ++SL + G + K +PIFPR Sbjct: 482 SKMFAQLGLIDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|228912778|ref|ZP_04076426.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228846838|gb|EEM91842.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 660 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 228/523 (43%), Positives = 344/523 (65%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDDEVY-------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + ++ K G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMVGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDEDDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE + + SL + G + K PIFPR Sbjct: 482 SKMFAQLGLTDEAHTSWGSLSTIGCIPAGTKVEKG-QPIFPRL 523 >gi|49477589|ref|YP_034392.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196036355|ref|ZP_03103752.1| methionyl-tRNA synthetase [Bacillus cereus W] gi|218901239|ref|YP_002449073.1| methionyl-tRNA synthetase [Bacillus cereus AH820] gi|228925292|ref|ZP_04088389.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228931541|ref|ZP_04094448.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228943845|ref|ZP_04106231.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229119701|ref|ZP_04248963.1| Methionyl-tRNA synthetase [Bacillus cereus 95/8201] gi|301051774|ref|YP_003789985.1| methionine--tRNA ligase [Bacillus anthracis CI] gi|49329145|gb|AAT59791.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|195990985|gb|EDX54956.1| methionyl-tRNA synthetase [Bacillus cereus W] gi|218535747|gb|ACK88145.1| methionyl-tRNA synthetase [Bacillus cereus AH820] gi|228663726|gb|EEL19304.1| Methionyl-tRNA synthetase [Bacillus cereus 95/8201] gi|228815802|gb|EEM62037.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228828093|gb|EEM73820.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228834339|gb|EEM79879.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|300373943|gb|ADK02847.1| methionine--tRNA ligase [Bacillus cereus biovar anthracis str. CI] Length = 660 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 229/523 (43%), Positives = 345/523 (65%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDEDDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE + + SL + G + K PIFPR Sbjct: 482 SKMFAQLGLTDEAHTSWGSLSTIGCIPAGTKVEKG-QPIFPRL 523 >gi|52145179|ref|YP_081651.1| methionyl-tRNA synthetase [Bacillus cereus E33L] gi|51978648|gb|AAU20198.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus cereus E33L] Length = 660 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 229/523 (43%), Positives = 345/523 (65%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE + + SL + G + K PIFPR Sbjct: 482 SKMFAQLGLTDEAHTSWGSLSTIGCIPAGTKVEKG-QPIFPRL 523 >gi|30018309|ref|NP_829940.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|229125556|ref|ZP_04254589.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|38258299|sp|Q81JA8|SYM1_BACCR RecName: Full=Methionyl-tRNA synthetase 1; AltName: Full=Methionine--tRNA ligase 1; Short=MetRS 1 gi|29893849|gb|AAP07141.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|228657873|gb|EEL13678.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] Length = 660 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 227/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD +++ + ++ISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNITPQAYVDNIVAGIKELWEKMNISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K + G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFSGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE ++ ++SL + G + K +PIFPR Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|206977934|ref|ZP_03238821.1| methionyl-tRNA synthetase [Bacillus cereus H3081.97] gi|229194429|ref|ZP_04321233.1| Methionyl-tRNA synthetase [Bacillus cereus m1293] gi|206743840|gb|EDZ55260.1| methionyl-tRNA synthetase [Bacillus cereus H3081.97] gi|228589019|gb|EEK47033.1| Methionyl-tRNA synthetase [Bacillus cereus m1293] Length = 660 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 229/523 (43%), Positives = 343/523 (65%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 KE + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 KENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADENR-CFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE + SL + G + K PIFPR Sbjct: 482 SKMFAQLGLTDEAHISWGSLSTIGCIPAGTKVEKG-QPIFPRL 523 >gi|229089170|ref|ZP_04220452.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|228694133|gb|EEL47814.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-42] Length = 660 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 229/523 (43%), Positives = 345/523 (65%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDEDDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE + + SL + G + K PIFPR Sbjct: 482 SKMFAQLGLTDEAHTSWGSLSTIGCIPAGTKVEKG-QPIFPRL 523 >gi|228950587|ref|ZP_04112722.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228809062|gb|EEM55546.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 660 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 227/523 (43%), Positives = 345/523 (65%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD + + + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNITPQAYVDNIVAGIKGLWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVAFAQDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE ++ ++SL + G + K +PIFPR Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|321313708|ref|YP_004205995.1| methionyl-tRNA synthetase [Bacillus subtilis BSn5] gi|320019982|gb|ADV94968.1| methionyl-tRNA synthetase [Bacillus subtilis BSn5] Length = 664 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 227/528 (42%), Positives = 341/528 (64%), Gaps = 26/528 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI + Sbjct: 3 QENNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD+ + + + + L+IS DDFIRTTEKRH +++K+ D GDIY Sbjct: 63 AEQENITPQEYVDRAAADIQKLWKQLEISNDDFIRTTEKRHKVVIEKVFQKLLDNGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE +Y + + + + G+ + +PV+ ++EE YFFR+ Y D Sbjct: 123 DEYEGWYSIPDETFYTETQLVDIERNEKGEVIGGKSPDSGHPVELIKEESYFFRMGKYAD 182 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YYE +P FI P R+NE+I+ F+K GL+DL++SR TFDWG+K+P++P++++YVWID Sbjct: 183 RLLKYYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPENPKHVVYVWID 242 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NYLT GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK+VF+H Sbjct: 243 ALFNYLTALGYDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+DP+ +IE G+D LRY+L+RE+ G DG + +G +R+N D Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K +DG I + GA TE D+++ SV ++ + M+N Sbjct: 363 LANDLGNLLNRTVAMINKYFDGQIGSYKGAVTEFDQTLTSVAEETVKAYEKVMENMEFSV 422 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + L+S ++Y D PW L K + +V+Y E +R A+LLQ F+ K Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAKDPAKEEELRSVMYHLAESLRISAVLLQPFLTKTP 482 Query: 471 NKIFDILFVADEN-RCFQSL-------DQRLKPGFMLHKTFDPIFPRF 510 K+F+ L + DE+ + + S+ D +++ G DP+FPR Sbjct: 483 EKMFEQLGITDESLKAWDSITAFGQLKDTKVQKG-------DPLFPRL 523 >gi|294496909|ref|YP_003560609.1| methionyl-tRNA synthetase [Bacillus megaterium QM B1551] gi|294346846|gb|ADE67175.1| methionyl-tRNA synthetase [Bacillus megaterium QM B1551] Length = 660 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 229/518 (44%), Positives = 341/518 (65%), Gaps = 16/518 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI + A+ Sbjct: 8 FYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIQRKAEEKN 67 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT + +VD +++ D +DISYDDFIRTTE RH + ++ ++ ++GDIY Y G Sbjct: 68 VTPQQYVDDIVSGIKELWDKMDISYDDFIRTTEPRHKEIVEKIFARLLEQGDIYLDEYEG 127 Query: 127 WYSLRDEAYYNDDEVY-------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 WYS+ DE YY + ++ K G+ ++ H PV+ + EE YFF++ Y D+LL++ Sbjct: 128 WYSVPDETYYTEHQLVDPIVENGKVVGGKSPDSGH-PVELVREESYFFKMGKYVDRLLAF 186 Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 YE +P FI P R+NE+I+ F+K GL+DL++SR TFDWG+K+P +P++++YVWIDAL+NY Sbjct: 187 YEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGNPKHVIYVWIDALSNY 246 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 +T+ GY D S K+WPA++H++GK+I+RFH IYWP L++ +LPLPKKVF+HG++L Sbjct: 247 ITSLGYDTENDESYRKYWPANVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLM 306 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + + +R+N DLAN + Sbjct: 307 KDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEAFVERINFDLANDL 366 Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 GNLV+R+V+MI K +DG+IPT G TE D I+ + + E M++ ALA + Sbjct: 367 GNLVNRTVAMINKYFDGVIPTYEGNVTEFDALIVQAQKDTVNKYEEAMEDMEFSVALASI 426 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 VS ++Y D +PW L K RA ++V+ E IR +A+LLQ F+ + KIF Sbjct: 427 WQYVSRTNKYIDETQPWALAKDENKRAELASVMTHLAESIRHIAVLLQPFLTRTPEKIFA 486 Query: 476 ILFVADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 + V ++ + ++S + LK G + K +P+FPR Sbjct: 487 QIGVKEDVLKTWESTTRFNMLKEGTKVEKG-EPMFPRL 523 >gi|42779117|ref|NP_976364.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|42735032|gb|AAS38972.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 10987] Length = 660 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 227/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 KE + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 KENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE D ++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDGTLVTFAQDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + L+S ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALSSIWQLISRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + +E + ++SL + G + K +PIFPR Sbjct: 482 SKMFAQLGLTEEAHTSWESLSTIGCIPAGTKVEKG-NPIFPRL 523 >gi|229917422|ref|YP_002886068.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b] gi|229468851|gb|ACQ70623.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b] Length = 653 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 223/510 (43%), Positives = 337/510 (66%), Gaps = 8/510 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + YI+T I YP+A+ HIGHAY + D +AR+ RL G DV + TGTDEHGQKI + A+ Sbjct: 3 KPTFYITTPIYYPSAKLHIGHAYTTVAGDAIARYKRLKGFDVRYLTGTDEHGQKIQEKAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AGVT + FVD+ + + D L+ISYDD+IRTTE RH +++ + GDIY G Sbjct: 63 EAGVTPQAFVDEVVEEIKVLWDRLEISYDDYIRTTEDRHKKVVEHVFETLLKNGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWYS+ DE YY + ++ DG+ ++ H PV+ + EE YFFRLS Y D+L+ Y+ESH Sbjct: 123 YEGWYSVPDETYYTESQL---VDGKSPDSGH-PVELVREECYFFRLSKYADRLIEYFESH 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FILP R+ E+I+ F+K GL+DL++SR TFDWG+++P +P++++YVW+DALTNY+++ Sbjct: 179 PDFILPESRKTEMINNFLKPGLQDLAVSRTTFDWGVQVPSNPKHVVYVWVDALTNYISSL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY + D ++WPAD+H++GK+I+RFH I WPA L++ +LPLPK+VF+HG++L K K Sbjct: 239 GYGTDNDELFNRYWPADVHLVGKEIVRFHTIIWPALLMALDLPLPKQVFAHGWLLMKDGK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DPI +I+ G+D++RY+L+RE+ G DG + + R+N DLAN +GNL+ Sbjct: 299 MSKSKGNVVDPIPLIDRYGLDSVRYYLLREVPFGADGTFTPEAFVDRLNFDLANDLGNLL 358 Query: 363 SRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 +R+++MI K +DG IP G T D +L+V ++ E M++ AL + LV Sbjct: 359 NRTIAMIKKYFDGNIPAYNGNVTAFDAELLNVVKETTRKTEEAMEHMEFSVALTNIWQLV 418 Query: 422 SEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S ++Y D +PW L K R ++V+ V+R +AI++Q F+ + ++F L + Sbjct: 419 SRANKYIDETQPWVLVKEESKREELASVMTHLAGVLRHVAIMIQPFMTRAPKEMFRQLGL 478 Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 E+ +++LD + PIFPR Sbjct: 479 EGEDMSWEALDTFADFSDAVVTDGTPIFPR 508 >gi|302870971|ref|YP_003839607.1| methionyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] gi|302573830|gb|ADL41621.1| methionyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] Length = 653 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 233/517 (45%), Positives = 337/517 (65%), Gaps = 12/517 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E+ K YI+T I YP+ + H+GH Y + AD +AR+ RL G DV F TGTDEHGQKI + A Sbjct: 2 EKPKFYITTPIYYPSDKLHVGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 Q AG T + +VD+ + +++ +++ISYDDFIRTTE+RH + ++ K+ ++GDIYK Sbjct: 62 QEAGKTPQQYVDEIVASIKELWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKS 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E+++ D ++ DG+ + PV+ EE YFFRLS YQD L+ Y E Sbjct: 122 EYEGWYCTPCESFWLDRQL---VDGKCPDCGR-PVERAREESYFFRLSKYQDALMKYIEE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEFI+P R NE+I+ F+K GL+D+ +SR T WGI++P DP++++YVWIDAL+NY+T Sbjct: 178 HPEFIVPQSRANEMINNFIKPGLEDVCVSRTTIKWGIEVPFDPKHVIYVWIDALSNYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY+ D K+WPAD+H++GK+I+RFH I WPA L++ LPLPK VF HG++L +G Sbjct: 238 LGYMSEDDSRFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKTVFGHGWLLLEGG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ + ++ GVD+LRYFL+REI G DG++ +D LK R N+DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVILAQKYGVDSLRYFLLREIPFGADGYFSEDALKNRHNSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 +SR+V+MI K +DG+I P E D + + V + + + + AL ++ L+ Sbjct: 358 LSRTVAMIEKYFDGVIYHPEEEEEIDNELKRLAKEVYENVCKLLDEFQFSNALIEIWKLI 417 Query: 422 SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S ++Y D PW L K R TVLY EV+R +A+L++ F+P+ KI L + Sbjct: 418 SRANKYIDQTMPWVLGKDKSKYPRLKTVLYNLAEVLRVVAVLIEPFMPQTTPKILQQLGI 477 Query: 480 A-DEN---RCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511 + DEN ++S Q L P K +PIFPR + Sbjct: 478 SKDENLDITTWESASQYGLIPEGTKVKRGEPIFPRII 514 >gi|295702276|ref|YP_003595351.1| methionyl-tRNA synthetase [Bacillus megaterium DSM 319] gi|294799935|gb|ADF37001.1| methionyl-tRNA synthetase [Bacillus megaterium DSM 319] Length = 660 Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust. Identities = 228/518 (44%), Positives = 342/518 (66%), Gaps = 16/518 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI + A+ Sbjct: 8 FYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIQRKAEEKN 67 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT + +VD +++ D +DISYDDFIRTTE RH + ++ ++ ++GDIY Y G Sbjct: 68 VTPQQYVDDIVSGIKELWDKMDISYDDFIRTTEPRHKEIVEKIFARLLEQGDIYLDEYEG 127 Query: 127 WYSLRDEAYYNDDEVY-------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 WYS+ DE YY + ++ K G+ ++ H PV+ + EE YFF++ Y D+LL++ Sbjct: 128 WYSVPDETYYTEHQLVDPIVENGKVVGGKSPDSGH-PVELVREESYFFKMGKYVDRLLAF 186 Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 YE +P FI P R+NE+I+ F+K GL+DL++SR TFDWG+K+P +P++++YVWIDAL+NY Sbjct: 187 YEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGNPKHVIYVWIDALSNY 246 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 +T+ GY D + K+WPA++H++GK+I+RFH IYWP L++ +LPLPKKVF+HG++L Sbjct: 247 ITSLGYGTENDENYRKYWPANVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLM 306 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + + +R+N DLAN + Sbjct: 307 KDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEAFVERINFDLANDL 366 Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 GNLV+R+V+MI K +DG+IPT G TE D I+ + + E M++ ALA + Sbjct: 367 GNLVNRTVAMINKYFDGVIPTYEGNVTEFDALIVQAQKDTVNKYEEAMEDMEFSVALASI 426 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 VS +++Y D +PW L K RA ++V+ E IR +A+LLQ F+ + KIF Sbjct: 427 WQYVSRMNKYIDETQPWALAKDENKRAELASVMTHLAESIRHIAVLLQPFLTRTPEKIFA 486 Query: 476 ILFVADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 + V ++ + ++S + LK G + K +P+FPR Sbjct: 487 QIGVKEDVLKTWESTTRFNMLKEGTKVEKG-EPMFPRL 523 >gi|146295253|ref|YP_001179024.1| methionyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145408829|gb|ABP65833.1| methionyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 655 Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust. Identities = 229/517 (44%), Positives = 336/517 (64%), Gaps = 12/517 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E+ K YI+T I YP+ + HIGH Y + AD LAR+ RL G DV F TGTDEHGQKI + A Sbjct: 2 EKPKFYITTPIYYPSDKLHIGHTYCTVAADTLARYKRLQGYDVFFLTGTDEHGQKIERKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 Q G T + +VD+ + +D+ +++ISYDDFIRTTE+RH + ++ K+ ++GDIYK Sbjct: 62 QEVGKTPQKYVDEIVASIKDLWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKS 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E+++ D ++ DG+ + PV+ EE YFFRLS YQD L+ Y E Sbjct: 122 EYEGWYCTPCESFWLDRQL---VDGKCPDCGR-PVERAREESYFFRLSKYQDALVKYIEE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HP+FI+P R NE+I+ F+K GL+D+ +SR T WGI +P DP++++YVWIDAL+NY+T Sbjct: 178 HPDFIVPQSRANEMINNFIKPGLEDVCVSRTTLKWGIPVPFDPKHVIYVWIDALSNYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY+ D K+WPAD+H++GK+I+RFH I WPA L++ LPLPK VF HG++L +G Sbjct: 238 LGYMSEDDSKFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKMVFGHGWLLLEGG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ + ++ GVD+LRYFL+REI G DG++ +D LK R N+DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVVLAQKYGVDSLRYFLLREIPFGADGYFSEDALKTRHNSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 +SR+V+MI K +DG+I P + D ++++ V +++ + + AL ++ L+ Sbjct: 358 LSRTVAMIEKYFDGIIHLPEVKEDLDNELITLAKEVYEKVCKCLDELQFSNALIEIWKLI 417 Query: 422 SEVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + ++Y D PW L K+ R TVLY EV+R +AIL++ F+P+ K+ L + Sbjct: 418 ARANKYIDETMPWVLGRDKSKHPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKMLAQLGI 477 Query: 480 A-DENRCFQSLDQRLKPGFMLHKTF----DPIFPRFL 511 + DEN S + G + T P+FPR + Sbjct: 478 SKDENPDITSWESAATFGLIRDGTKVKRDQPLFPRIV 514 >gi|312623342|ref|YP_004024955.1| methionyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] gi|312203809|gb|ADQ47136.1| methionyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] Length = 653 Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust. Identities = 233/517 (45%), Positives = 338/517 (65%), Gaps = 12/517 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E+ K YI+T I YP+ + HIGH Y + AD +AR+ RL G DV F TGTDEHGQKI + A Sbjct: 2 EKPKFYITTPIYYPSDKLHIGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 Q AG T + +VD+ + +D+ +++ISYDDFIRTTE+RH + ++ K+ ++GDIYK Sbjct: 62 QEAGKTPQEYVDEIVASIKDLWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKS 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E+++ D ++ DG+ + PV+ EE YFFRLS YQD L+ Y E Sbjct: 122 EYEGWYCTPCESFWLDRQL---VDGKCPDCGR-PVERAREESYFFRLSKYQDALVKYIEE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HP+FI+P R NE+I+ F+K GL+D+ +SR T WGI +P DP++++YVWIDAL+NY+T Sbjct: 178 HPDFIVPQSRANEMINNFIKPGLEDVCVSRTTIKWGIPVPFDPKHVIYVWIDALSNYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY+ D K+WPAD+H++GK+I+RFH I WPA L++ LPLPK VF HG++L +G Sbjct: 238 LGYMSEDDSKFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKMVFGHGWLLLEGG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ + ++ GVD+LRYFL+REI G DG + +D L+ R N+DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVILAQKYGVDSLRYFLLREIPFGADGHFSEDALRTRHNSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 +SR+V+MI K +D +I P A + D ++++ V +++ + AL ++ L+ Sbjct: 358 LSRTVAMIEKYFDEIIHLPEAKEDLDNELITLAKEVYEKVCRCLDELQFSNALIEIWKLI 417 Query: 422 SEVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + ++Y D PW L K+ R TVLY EV+R +AIL++ F+P+ KI L + Sbjct: 418 ARANKYIDETMPWVLGRDKSKYPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKILQQLGI 477 Query: 480 A-DEN---RCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511 + DEN ++S Q L P K DPIFPR + Sbjct: 478 SKDENPDITAWESASQFGLIPEGTKVKRGDPIFPRIV 514 >gi|16077106|ref|NP_387919.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221307847|ref|ZP_03589694.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221312169|ref|ZP_03593974.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317102|ref|ZP_03598396.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. JH642] gi|221321365|ref|ZP_03602659.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY] gi|586060|sp|P37465|SYM_BACSU RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|467427|dbj|BAA05273.1| methionyl-tRNA synthetase [Bacillus subtilis] gi|2632305|emb|CAB11814.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] Length = 664 Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust. Identities = 226/528 (42%), Positives = 340/528 (64%), Gaps = 26/528 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI + Sbjct: 3 QENNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD+ + + + + L+IS DDFIRTTEKRH +++K+ D GDIY Sbjct: 63 AEQENITPQEYVDRAAADIQKLWKQLEISNDDFIRTTEKRHKVVIEKVFQKLLDNGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE +Y + + + + G+ + +PV+ ++EE YFFR+ Y D Sbjct: 123 DEYEGWYSIPDETFYTETQLVDIERNEKGEVIGGKSPDSGHPVELIKEESYFFRMGKYAD 182 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YYE +P FI P R+NE+I+ F+K GL+DL++SR TFDWG+K+P++P++++YVWID Sbjct: 183 RLLKYYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPENPKHVVYVWID 242 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NYLT GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK+VF+H Sbjct: 243 ALFNYLTALGYDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+DP+ +IE G+D LRY+L+RE+ G DG + +G +R+N D Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K +DG I + GA TE D ++ SV ++ + M+N Sbjct: 363 LANDLGNLLNRTVAMINKYFDGQIGSYKGAVTEFDHTLTSVAEETVKAYEKAMENMEFSV 422 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + L+S ++Y D PW L K + +V+Y E +R A+LLQ F+ K Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAKDPAKEEELRSVMYHLAESLRISAVLLQPFLTKTP 482 Query: 471 NKIFDILFVADEN-RCFQSL-------DQRLKPGFMLHKTFDPIFPRF 510 K+F+ L + DE+ + + S+ D +++ G +P+FPR Sbjct: 483 EKMFEQLGITDESLKAWDSITAFGQLKDTKVQKG-------EPLFPRL 523 >gi|296329539|ref|ZP_06872025.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672736|ref|YP_003864407.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] gi|296153282|gb|EFG94145.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305410979|gb|ADM36097.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] Length = 664 Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust. Identities = 226/528 (42%), Positives = 340/528 (64%), Gaps = 26/528 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI + Sbjct: 3 QENNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD+ + + + + L+IS DDFIRTTEKRH +++K+ D GDIY Sbjct: 63 AEQENITPQEYVDRAAADIQKLWKQLEISNDDFIRTTEKRHKVVIEKVFQKLLDNGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE +Y + + + + G+ + +PV+ ++EE YFFR+ Y D Sbjct: 123 DEYEGWYSIPDETFYTETQLVDIERNEKGEVIGGKSPDSGHPVELIKEESYFFRMGKYAD 182 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YYE +P FI P R+NE+I+ F+K GL+DL++SR TFDWG+K+P++P++++YVWID Sbjct: 183 RLLKYYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPENPKHVVYVWID 242 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NYLT GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK+VF+H Sbjct: 243 ALFNYLTALGYDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+DP+ +IE G+D LRY+L+RE+ G DG + +G +R+N D Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K +DG I + GA TE D+++ SV ++ + M+N Sbjct: 363 LANDLGNLLNRTVAMINKYFDGQIGSYKGAVTEFDQTLTSVAEETVKAYEKAMENMEFSV 422 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + L+S ++Y D PW L K + +V+Y E +R A+LLQ F+ K Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAKDPAKEEELHSVMYHLAESLRISAVLLQPFLTKTP 482 Query: 471 NKIFDILFVADEN-RCFQSL-------DQRLKPGFMLHKTFDPIFPRF 510 K+F+ L + DE + + S+ D +++ G +P+FPR Sbjct: 483 EKMFEQLGITDEALKAWDSITTFGQLKDTKVQKG-------EPLFPRL 523 >gi|313635219|gb|EFS01522.1| methionyl-tRNA synthetase [Listeria seeligeri FSL N1-067] Length = 665 Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust. Identities = 229/522 (43%), Positives = 342/522 (65%), Gaps = 13/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 4 EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD+ + F+++ L+IS DFIRTT+ RH T +++++ ++GDIY Sbjct: 64 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKLTVEKIFEQLLEQGDIYL 123 Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + +EVYK +G+ + N V+ ++EE YFFR+S Y D+ Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L+ YY SHPEFILP R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPSNPKHVVYVWIDA 243 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPK +F HG Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMIFGHG 303 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +IL K K+SKS GNV+DP +I+ G+DALRY+L+RE+ G DG + + R+N DL Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFIDRMNYDL 363 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K + IP GA T DE+++ + V+ + ++M + A Sbjct: 364 ANDLGNLLNRTVAMINKYFXXXIPAYQGAVTPFDETLVDFKNNVVADYEKSMDHMQFSVA 423 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L Q+ SLVS ++Y D PW L K R ++V+ E +R +A+LLQ F+ + Sbjct: 424 LNQLWSLVSRTNKYIDETAPWALAKDEEKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483 Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 +IF L + +EN + + S+ + G + K PIFPR Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTNVVKKGTPIFPRL 525 >gi|194017985|ref|ZP_03056592.1| methionyl-tRNA synthetase [Bacillus pumilus ATCC 7061] gi|194010322|gb|EDW19897.1| methionyl-tRNA synthetase [Bacillus pumilus ATCC 7061] Length = 666 Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust. Identities = 229/525 (43%), Positives = 340/525 (64%), Gaps = 17/525 (3%) Query: 1 MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M E++K Y++T I YP+ + HIGHAY + D +AR+ RL G DV++ TGTDEHGQKI Sbjct: 1 MPEKKKTFYLTTPIYYPSGKLHIGHAYTTVAGDAMARYKRLQGYDVMYLTGTDEHGQKIQ 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 + A+ +T ++D + + + LDIS DDFIRTTEKRH +++K+ D+GDI Sbjct: 61 QKAEEQNITPIEYLDPVVADIQSLWKKLDISNDDFIRTTEKRHTKIIEQVFQKLLDQGDI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAY 172 Y Y GWYS+ DE +Y + + V + G+ + +PV+ ++EE YFFR+S Y Sbjct: 121 YLDQYEGWYSIPDETFYTETQLVDVERNEKGEVTGGKSPDSGHPVELIKEESYFFRMSKY 180 Query: 173 QDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231 D+LL YYE +P FI P R+NE+I+ F+K GL+DL++SR TFDWGIK+P++P++++YVW Sbjct: 181 ADRLLDYYEKNPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPNNPKHVIYVW 240 Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291 IDAL NYLT GY + D K+WPA++H++GK+I+RFH IYWP L++ +LPLPK++F Sbjct: 241 IDALFNYLTAIGYGTDQDEKYKKYWPANVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIF 300 Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 +HG++L K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +RVN Sbjct: 301 AHGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFVERVN 360 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLI 410 DLAN +GNL++R+V+M+ K +DG + + G E DE + +V + ++ E M+N Sbjct: 361 YDLANDLGNLLNRTVAMVQKYFDGTLSSYKGPVNEFDEELKAVAEQTVKAYEEAMENLEF 420 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPK 468 AL+ V +L+S ++Y D PW L K R +V+Y E +R A+LL F+ K Sbjct: 421 SVALSNVWTLISRTNKYIDQTAPWVLAKDETKRKELHSVMYHLAESLRITAVLLTPFLTK 480 Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF---DPIFPRF 510 KIF L + +E +S D L G + T +P+FPR Sbjct: 481 TPEKIFFQLGIEEEK--LKSWDSILSFGAIQQATVQKGEPLFPRL 523 >gi|78044237|ref|YP_361414.1| methionyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] gi|77996352|gb|ABB15251.1| methionyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] Length = 653 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 226/510 (44%), Positives = 333/510 (65%), Gaps = 9/510 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+T I YP+ HIGHAY + AD +ARF R+ G DV F TG+DEHGQKI + A++ Sbjct: 3 KSFYITTPIYYPSDNLHIGHAYTTVAADTMARFKRMTGYDVWFLTGSDEHGQKIERKAKS 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ K +VD +F+ + +LDISYDDFIRTTE+RH + +++K+ D+GDIYK Y Sbjct: 63 QGLSPKEYVDPIVDSFKHLWKLLDISYDDFIRTTEERHKKVVQAIFQKLYDQGDIYKSAY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY EA++ + ++ DG+ + PV+W EE YFF++S Y D+LL + E +P Sbjct: 123 EGWYCTPCEAFWTEGKL---IDGKCPDCGR-PVEWTREESYFFKMSKYADRLLKHIEENP 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 EFI+P RRNE+I+F+K GL+DL +SR TF+WGI +P D ++++YVW+DALTNY++ GY Sbjct: 179 EFIVPESRRNEMINFIKQGLEDLCVSRTTFNWGIPVPFDKKHVVYVWVDALTNYISALGY 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + D K+WPAD+H++GKDI+RFH + WP LL+ + LPKKV HG+ + +G K+S Sbjct: 239 GTDDDHLFQKYWPADVHLVGKDIVRFHTVIWPIILLALGIELPKKVVGHGWFVLEGGKMS 298 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+DP++++E+ GVDA+RYFLVRE+ G D Y ++ L R+N DLAN +GNL++R Sbjct: 299 KSKGNVVDPVKLVEKYGVDAVRYFLVREMPLGLDAVYSEEALINRINVDLANDLGNLLNR 358 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 ++SM+ K G IP P + E D ++ + + E + M + ALA + LV+ + Sbjct: 359 TLSMLEKFLGGEIPLPSEYEEIDREVIELALALPAETEKLMDKFDLAGALANIWRLVTRL 418 Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 ++Y D PW L K +R TVLYV +E R + +LL+ +P K+ L V DE+ Sbjct: 419 NKYIDEVAPWSLNKEGKIERLKTVLYVVLEGYRFITVLLKPVMPNFPAKVSAQLGVNDES 478 Query: 484 R-CFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 ++SL RL G + K +P+FPR Sbjct: 479 LFTWESLSNWGRLPAGVKIKKG-EPLFPRL 507 >gi|291482409|dbj|BAI83484.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195] Length = 664 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 225/528 (42%), Positives = 341/528 (64%), Gaps = 26/528 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI + Sbjct: 3 QENNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD+ + + + + L+IS DDFIRTTEKRH +++K+ D GDIY Sbjct: 63 AEQENITPQEYVDRAAADIQKLWKQLEISNDDFIRTTEKRHKVVIEKVFQKLLDNGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE +Y + + + + G+ + +PV+ ++EE YFFR+ Y D Sbjct: 123 DEYEGWYSIPDETFYTETQLVDIERNEKGEVIGGKSPDSGHPVELIKEESYFFRMGKYAD 182 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YYE +P FI P R+NE+I+ F+K GL+DL++SR TFDWG+K+P++P++++YVWID Sbjct: 183 RLLKYYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPENPKHVVYVWID 242 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NYLT GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK+VF+H Sbjct: 243 ALFNYLTALGYDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+DP+ +IE G+D LRY+L+RE+ G DG + +G +R+N D Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K +DG I + GA TE D+++ SV ++ + M+N Sbjct: 363 LANDLGNLLNRTVAMINKYFDGQIGSYKGAVTEFDQTLTSVAEETVKAYEKAMENMEFSV 422 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + L+S ++Y D PW L K + +V+Y E +R A+LLQ F+ K Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAKDPAKEEELRSVMYHLAESLRISAVLLQPFLTKTP 482 Query: 471 NKIFDILFVADEN-RCFQSL-------DQRLKPGFMLHKTFDPIFPRF 510 K+F+ L + D++ + + S+ D +++ G +P+FPR Sbjct: 483 EKMFEQLGITDDSLKAWDSITAFGQLKDTKVQKG-------EPLFPRL 523 >gi|312134269|ref|YP_004001607.1| methionyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] gi|311774320|gb|ADQ03807.1| methionyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] Length = 653 Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust. Identities = 232/517 (44%), Positives = 338/517 (65%), Gaps = 12/517 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E+ K YI+T I YP+ + H+GH Y + AD +AR+ RL G DV F TGTDEHGQKI + A Sbjct: 2 EKPKFYITTPIYYPSDKLHVGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 Q AG T + +VD+ + +++ +++ISYDDFIRTTE+RH + ++ K+ ++GDIYK Sbjct: 62 QEAGKTPQEYVDEIVASIKELWKLMNISYDDFIRTTEERHKKVVQKIFSKLYEQGDIYKS 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E+++ D ++ DG+ + PV+ EE YFFRLS YQD L+ Y E Sbjct: 122 EYEGWYCTPCESFWLDRQL---VDGKCPDCGR-PVERAREESYFFRLSKYQDALMKYIEE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEFI+P R NE+I+ F+K GL+D+ +SR T WGI++P DP++++YVWIDAL+NY+T Sbjct: 178 HPEFIVPQSRANEMINNFIKPGLEDVCVSRTTIKWGIEVPFDPKHVIYVWIDALSNYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY+ D K+WPAD+H++GK+I+RFH I WPA L++ LPLPK VF HG++L +G Sbjct: 238 LGYMSEDDSRFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKTVFGHGWLLLEGG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ + ++ GVD+LRYFL+REI G DG++ ++ LK R N+DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVILAQKYGVDSLRYFLLREIPFGADGYFSEEALKNRHNSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 +SR+V+MI K +DG+I P E D + S+ V + + + + AL ++ L+ Sbjct: 358 LSRTVAMIEKYFDGVIYLPEEKEEIDNELSSLAKEVYENVCKLLDEFQFSNALIEIWKLI 417 Query: 422 SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S ++Y D PW L K + R TVLY EV+R +AIL++ F+P+ KI L + Sbjct: 418 SRANKYIDQTMPWVLGKDSSKYPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKILQQLGI 477 Query: 480 A-DEN---RCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511 + DEN ++S Q L P K + +FPR + Sbjct: 478 SKDENLDITTWESASQFGLIPEGTKVKRGEHVFPRII 514 >gi|312792522|ref|YP_004025445.1| methionyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179662|gb|ADQ39832.1| methionyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 653 Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust. Identities = 229/517 (44%), Positives = 337/517 (65%), Gaps = 12/517 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E+ K YI+T I YP+ + H+GH Y + AD +AR+ RL G DV F TGTDEHGQKI + A Sbjct: 2 EKPKFYITTPIYYPSDKLHVGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 Q AG T + +VD+ + +++ +++ISYDDFIRTTE+RH + ++ K+ ++GDIYK Sbjct: 62 QEAGKTPQQYVDEIVASIKELWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKS 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E+++ D ++ DG+ + PV+ EE YFFRLS YQD L+ Y E Sbjct: 122 EYEGWYCTPCESFWLDRQL---IDGKCPDCGR-PVERAREESYFFRLSKYQDALMKYIEE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEFI+P R NE+I+ F+K GL+D+ +SR T WGI++P DP++++YVWIDAL+NY+T Sbjct: 178 HPEFIVPQSRANEMINNFIKPGLEDICVSRTTIKWGIEVPFDPKHVIYVWIDALSNYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY+ D K+WPAD+H++GK+I+RFH I WPA L++ LPLPK VF HG++L +G Sbjct: 238 LGYMSEDDSRFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKTVFGHGWLLLEGG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ + ++ GVD+LRYFL+REI G DG++ ++ LK R N+DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVVLAQKYGVDSLRYFLLREIPFGADGYFSEEALKNRHNSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 +SR+V+MI K +DG+I P E D + + V + + + + AL ++ L+ Sbjct: 358 LSRTVAMIEKYFDGVIYLPEEKEEIDNELKDLAKEVYENVCKLLDEFQFSNALIEIWKLI 417 Query: 422 SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S ++Y D PW L K R TVLY EV+R +AIL++ F+P+ KI + L + Sbjct: 418 SRANKYIDQTMPWVLGKDKSKYPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKILEQLGI 477 Query: 480 A-DENRCFQSLDQRLKPGFMLHKT----FDPIFPRFL 511 + D+N + + + G + T +PIFPR + Sbjct: 478 SKDKNPEITAWETAGQFGLIPEGTKVKRGEPIFPRIV 514 >gi|312877507|ref|ZP_07737468.1| methionyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] gi|311795710|gb|EFR12078.1| methionyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] Length = 653 Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust. Identities = 229/517 (44%), Positives = 336/517 (64%), Gaps = 12/517 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E+ K YI+T I YP+ + H+GH Y + AD +AR+ RL G DV F TGTDEHGQKI + A Sbjct: 2 EKPKFYITTPIYYPSDKLHVGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 Q AG T + +VD+ + +++ +++ISYDDFIRTTE+RH + ++ K+ ++GDIYK Sbjct: 62 QEAGKTPQQYVDEIVASIKELWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKS 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E+++ D ++ DG+ + PV+ EE YFFRLS YQD L+ Y E Sbjct: 122 EYEGWYCTPCESFWLDRQL---IDGKCPDCGR-PVERAREESYFFRLSKYQDALMKYIEE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEFI+P R NE+I+ F+K GL+D+ +SR T WGI++P DP++++YVWIDAL+NY+T Sbjct: 178 HPEFIVPQSRANEMINNFIKPGLEDICVSRTTIKWGIEVPFDPKHVIYVWIDALSNYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY+ D K+WPAD+H++GK+I+RFH I WPA L+S LPLPK VF HG++L +G Sbjct: 238 LGYMSEDDSRFKKYWPADVHLVGKEIVRFHTIIWPAMLMSLGLPLPKTVFGHGWLLLEGG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ + ++ GVD+LRYFL+REI G DG++ ++ LK R N+DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVVLAQKYGVDSLRYFLLREIPFGADGYFSEEALKNRHNSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 +SR+V+MI K +D +I P E D + + V + + + + AL ++ L+ Sbjct: 358 LSRTVAMIEKYFDSVIYLPEEKEEIDNELKDIAKEVYENVCKLLDEFQFSNALIEIWKLI 417 Query: 422 SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S ++Y D PW L K R TVLY EV+R +AIL++ F+P+ KI + L + Sbjct: 418 SRANKYIDQTMPWVLGKDKSKYPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKILEQLGI 477 Query: 480 A-DENRCFQSLDQRLKPGFMLHKT----FDPIFPRFL 511 + D+N + + + G + T +PIFPR + Sbjct: 478 SKDKNPEITAWETAGQFGLIPEGTKVKRGEPIFPRIV 514 >gi|30260228|ref|NP_842605.1| methionyl-tRNA synthetase [Bacillus anthracis str. Ames] gi|47777767|ref|YP_016640.2| methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49183072|ref|YP_026324.1| methionyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|65317498|ref|ZP_00390457.1| COG0143: Methionyl-tRNA synthetase [Bacillus anthracis str. A2012] gi|167635109|ref|ZP_02393426.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|167641535|ref|ZP_02399783.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|170688925|ref|ZP_02880127.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|170707587|ref|ZP_02898040.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|177655324|ref|ZP_02936853.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190569007|ref|ZP_03021908.1| methionyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|229600122|ref|YP_002864689.1| methionine--tRNA ligase [Bacillus anthracis str. A0248] gi|254682335|ref|ZP_05146196.1| methionyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066] gi|254724179|ref|ZP_05185964.1| methionyl-tRNA synthetase [Bacillus anthracis str. A1055] gi|254733574|ref|ZP_05191295.1| methionyl-tRNA synthetase [Bacillus anthracis str. Western North America USA6153] gi|254744658|ref|ZP_05202337.1| methionyl-tRNA synthetase [Bacillus anthracis str. Kruger B] gi|254762419|ref|ZP_05214261.1| methionyl-tRNA synthetase [Bacillus anthracis str. Australia 94] gi|38258301|sp|Q81W03|SYM1_BACAN RecName: Full=Methionyl-tRNA synthetase 1; AltName: Full=Methionine--tRNA ligase 1; Short=MetRS 1 gi|30253549|gb|AAP24091.1| methionine--tRNA ligase [Bacillus anthracis str. Ames] gi|47551472|gb|AAT29115.2| methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49176999|gb|AAT52375.1| methionyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|167510520|gb|EDR85918.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|167529583|gb|EDR92333.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|170127583|gb|EDS96457.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|170667149|gb|EDT17910.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|172080165|gb|EDT65258.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190559931|gb|EDV13915.1| methionyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|229264530|gb|ACQ46167.1| methionine--tRNA ligase [Bacillus anthracis str. A0248] Length = 660 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 228/523 (43%), Positives = 344/523 (65%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ + G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKCMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVILIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDEDDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE + + SL + G + K PIFPR Sbjct: 482 SKMFAQLGLTDEAHTSWGSLSTIGCIPAGTKVEKG-QPIFPRL 523 >gi|78223524|ref|YP_385271.1| methionyl-tRNA synthetase [Geobacter metallireducens GS-15] gi|78194779|gb|ABB32546.1| methionyl-tRNA synthetase [Geobacter metallireducens GS-15] Length = 509 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 224/505 (44%), Positives = 327/505 (64%), Gaps = 8/505 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y N PHIGHAY + ADVLAR+ RL G DV F TGTDEHGQK+ KAA AG Sbjct: 5 FYVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLKGYDVFFLTGTDEHGQKVEKAANAAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T D+ + F+ + + LDISY+DFIRTT++RH L++++ KGDIY G Y Sbjct: 65 ETPLELADRVVKRFQALWEKLDISYNDFIRTTQERHKKGVTHLFREVMAKGDIYLGEYED 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WY E ++ + ++ DG+ + + PV+ ++EE YFFR+S YQ++LL++ E++P+F Sbjct: 125 WYCTPCETFWTETQLI---DGKCPDC-NRPVEKLKEESYFFRMSKYQEQLLAHIEANPDF 180 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P RRNE+ISFVK GL+DLS+SR +F+WGI +P + ++++YVW DALTNY+T GY D Sbjct: 181 IQPKSRRNEIISFVKEGLRDLSVSRTSFNWGIPVPGNERHVIYVWFDALTNYITALGYPD 240 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 G+ KFWP D H+IGKDILRFHA+YWP FL++A LP+P+KVF+HG+ +G+K+SKS Sbjct: 241 QA-GNYGKFWPVDAHLIGKDILRFHAVYWPTFLMAAGLPVPRKVFAHGWWTVEGQKMSKS 299 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 L NV++P ++++ G+DA+RYFL+RE+ G DG + L R+N+DLAN +GNL+SRS Sbjct: 300 LQNVVEPNMLVDKYGIDAVRYFLLREVPFGLDGDFSHAALVHRINSDLANDLGNLLSRST 359 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +M+ K + G +P PGA TE D + + ++ ++ M + L + ++S ++ Sbjct: 360 AMVNKYFGGTLPQPGAMTELDAAFRARTEAMISQLESCMDEMAFSKGLQAIWEVISAGNK 419 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 Y D PW L K +R T++Y +E R + LL AF+P+ A K L + R Sbjct: 420 YIDESAPWTLAKDPAQKERLGTIMYTLLEAQRIVHTLLSAFMPRTAAKALGYLGCMEALR 479 Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPR 509 +L PG + K + +FPR Sbjct: 480 DEDLAWGKLVPGTQIAKA-EALFPR 503 >gi|157690820|ref|YP_001485282.1| methionyl-tRNA synthetase [Bacillus pumilus SAFR-032] gi|157679578|gb|ABV60722.1| methionine--tRNA ligase [Bacillus pumilus SAFR-032] Length = 666 Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust. Identities = 231/526 (43%), Positives = 342/526 (65%), Gaps = 19/526 (3%) Query: 1 MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M E++K Y++T I YP+ + HIGHAY + D +AR+ RL G DV++ TGTDEHGQKI Sbjct: 1 MPEKKKTFYLTTPIYYPSGKLHIGHAYTTVAGDAMARYKRLQGYDVMYLTGTDEHGQKIQ 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 + A+ +T ++D + + + LDIS DDFIRTTEKRH +++K+ D+GDI Sbjct: 61 QKAEEQNITPIEYLDPVVADIQSLWKKLDISNDDFIRTTEKRHTIIIGQVFQKLLDQGDI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVY------KG--ADGQYYNAQHNPVQWMEEEGYFFRLSA 171 Y Y GWYS+ DE +Y + ++ KG G+ ++ H PV+ ++EE YFFR+S Sbjct: 121 YLDQYEGWYSIPDETFYTETQLVDVEHNEKGEVTGGKSPDSGH-PVELIKEESYFFRMSK 179 Query: 172 YQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230 Y D+LL YYE +P FI P R+NE+I+ F+K GL+DL++SR TFDWGIK+P++P++++YV Sbjct: 180 YADRLLDYYEKNPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPNNPKHVIYV 239 Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV 290 WIDAL NYLT GY + D K+WPA++H++GK+I+RFH IYWP L++ +LPLPK++ Sbjct: 240 WIDALFNYLTAIGYGTDQDEKYKKYWPANVHLVGKEIVRFHTIYWPIMLMALDLPLPKQI 299 Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350 F+HG++L K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +RV Sbjct: 300 FAHGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFVERV 359 Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQL 409 N DLAN +GNL++R+V+M+ K +DG + + G E DE + +V + ++ E M+N Sbjct: 360 NYDLANDLGNLLNRTVAMVQKYFDGTLSSYKGPVNEFDEELKAVAEQTVKAYEEAMENLE 419 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVP 467 AL+ V +L+S ++Y D PW L K R +V+Y E +R A+LL F+ Sbjct: 420 FSVALSNVWTLISRTNKYIDQTAPWVLAKDESKRKELHSVMYHLAESLRITAVLLTPFLT 479 Query: 468 KLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF---DPIFPRF 510 K KIF L + +E +S D L G + T +P+FPR Sbjct: 480 KTPEKIFFQLGIEEEK--LKSWDSILSFGAIQQATVQKGEPLFPRL 523 >gi|291278499|ref|YP_003495334.1| methionyl-tRNA synthetase [Deferribacter desulfuricans SSM1] gi|290753201|dbj|BAI79578.1| methionyl-tRNA synthetase [Deferribacter desulfuricans SSM1] Length = 640 Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust. Identities = 230/514 (44%), Positives = 334/514 (64%), Gaps = 19/514 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y N PHIGHAY + ADVLAR+ RL G DV F TGTDEHGQKI +AAQ G Sbjct: 6 FYVTTPIYYVNDVPHIGHAYTTVAADVLARYKRLCGYDVFFLTGTDEHGQKIEQAAQKKG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T K D F+ + L+IS D FIRTT++ H T + ++KK+ + GDIY G Y G Sbjct: 66 ITPKELADTVVERFKSLWVKLNISNDKFIRTTDEEHKKTVQKIFKKMQENGDIYLGEYEG 125 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WY E Y+ + ++ DG + + ++E YFF++S YQ++LL Y + +P+F Sbjct: 126 WYCTPCETYWTETQLL---DGNHCPSCGRETHKLKEPSYFFKMSKYQNELLKYIQENPDF 182 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P R+NE++SF+K GLKDLS+SR +F WGI +P D +++YVWIDALTNY++ GYLD Sbjct: 183 IQPTSRKNEIVSFIKEGLKDLSVSRVSFKWGIPVPGDENHVIYVWIDALTNYISAIGYLD 242 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 K K+WPAD+H++GKDILRFH +YWP L+SA LPLPKKVF+HG+ +G+K+SKS Sbjct: 243 ETKQFK-KYWPADVHLVGKDILRFHTVYWPTMLMSAGLPLPKKVFAHGWWTVEGQKMSKS 301 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 LGN IDP +++ GVDA+RYFL+RE+ G DG + L R+N DLAN +GNL++R++ Sbjct: 302 LGNAIDPNWLVDTFGVDAIRYFLLREVPFGLDGDFSFKALIHRINGDLANDLGNLLNRTM 361 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 M+ + ++G+IP E+D+ +L+ V E+ ++ N ++AL + LVSE+++ Sbjct: 362 GMVKRYFNGIIPEYKVEDETDKELLAKIEEVFDEVDTHLNNIAFNKALISIWQLVSELNK 421 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI-----FDI-LF 478 Y D PW L K + DR +VLY+ ++ IR L++L+ F+P+ + +I DI +F Sbjct: 422 YIDKNAPWMLAKDESKRDRLESVLYLVLDGIRILSLLIYPFMPQTSEEIRRQLNIDIDVF 481 Query: 479 VADENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510 +D F+ L ++LKPG L + +FPR Sbjct: 482 KSD----FEDLKKVKQLKPGLKLGEA-KQLFPRI 510 >gi|319790219|ref|YP_004151852.1| methionyl-tRNA synthetase [Thermovibrio ammonificans HB-1] gi|317114721|gb|ADU97211.1| methionyl-tRNA synthetase [Thermovibrio ammonificans HB-1] Length = 526 Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust. Identities = 229/475 (48%), Positives = 317/475 (66%), Gaps = 6/475 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 EK Y++T I Y N +PH+GHAY ADV+ARF+R G DV F TGTDEHGQKI +AA+ Sbjct: 3 EKFYVTTPIYYVNDKPHLGHAYTTTAADVVARFNRFLGRDVFFLTGTDEHGQKIQQAAEK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ K FVD+ F+ + +VL+ISYD FIRTT+ H + ++ K + GDIY G Y Sbjct: 63 MGMSPKEFVDRLVPVFKKLWEVLNISYDHFIRTTDPEHVKAVQHIFMKCYENGDIYLGEY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY + E YY + ++ DG+ A V ++EE YFFRLS YQDKLL YE +P Sbjct: 123 EGWYCIPCETYYTEKDL---IDGKLCPACKREVTRVKEESYFFRLSKYQDKLLELYEKNP 179 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RRNEVI+FVK GLKDLS+SR +F WGI +P + ++++YVW DALTNYLT GY Sbjct: 180 DFIGPEFRRNEVINFVKQGLKDLSISRTSFSWGIPVPINEKHVIYVWFDALTNYLTAVGY 239 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D+ + ++WPADLH++GKDILRFHA+YWPAFL+SA LP+PK+VF+HG+ +GEK+S Sbjct: 240 PDDTE-RLNRYWPADLHLVGKDILRFHAVYWPAFLMSAGLPVPKRVFAHGWWTVEGEKMS 298 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+DP EV+E+ GVD +R+FL RE++ G DG + + L R+N +LAN +GNL +R Sbjct: 299 KSKGNVVDPFEVVEKFGVDQVRFFLFREVSFGLDGDFSYEKLVARINGELANDLGNLFNR 358 Query: 365 SVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 ++SM+ K ++P P G F E D+ I + L+ ++E + + +AL ++ V Sbjct: 359 TLSMLKKYRKSVVPEPKGEFDELDKKIANKALATLKALKELIPRAELSKALDEIWQFVGF 418 Query: 424 VDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V+ Y D + PW LKK D TVLY VE +R + L ++P A K+ +L Sbjct: 419 VNYYIDRRAPWSLKKEGKDAELDTVLYNMVEALRFITAFLYPYMPASAEKMVQLL 473 >gi|297528406|ref|YP_003669681.1| methionyl-tRNA synthetase [Geobacillus sp. C56-T3] gi|297251658|gb|ADI25104.1| methionyl-tRNA synthetase [Geobacillus sp. C56-T3] Length = 650 Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust. Identities = 225/514 (43%), Positives = 336/514 (65%), Gaps = 10/514 (1%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E++ Y++T I YP+ + HIGHAY + D +AR+ R+ G DV++ TGTDEHGQKI + A Sbjct: 2 EKKTFYLTTPIYYPSDRLHIGHAYTTVAGDAMARYKRMRGYDVMYLTGTDEHGQKIQRKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + GVT + +VD+ +++ LDISYDDFIRTT++RH ++ ++ ++GDIY G Sbjct: 62 EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEQIFTRLVEQGDIYLG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E++Y + ++ DG + PV+ ++EE YFFR+S Y D+LL YYE Sbjct: 122 EYEGWYCTPCESFYTERQL---VDGNCPDCG-RPVEKVKEESYFFRMSKYVDRLLQYYEE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +P+FI P R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDAL NY+T Sbjct: 178 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVIYVWIDALANYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY + D K+WPAD+H++GK+I+RFH IYWP L++ LPLPKKVF HG++L K Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFGHGWLLMKDG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFIERINYDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 + R+V+MI K +DG+IP G T D+ + V+++ E M+ ALA V L Sbjct: 358 LHRTVAMIEKYFDGVIPPYRGPKTPFDQELAQTAREVVRQYEEAMEGMEFSVALAAVWQL 417 Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 +S ++Y D +PW L K D + V+ E +R +A+LLQ F+ + ++F L Sbjct: 418 ISRTNKYIDETQPWVLAKDEQKRDELAAVMTHLAESLRHMAVLLQPFLTRTPERMFAQLG 477 Query: 479 VADEN-RCFQSL-DQRLKPGFMLHKTFDPIFPRF 510 + D + + + SL D L P + +P+FPR Sbjct: 478 ITDHSLKEWDSLYDFGLIPEGTKVQKGEPLFPRL 511 >gi|297582380|ref|YP_003698160.1| methionyl-tRNA synthetase [Bacillus selenitireducens MLS10] gi|297140837|gb|ADH97594.1| methionyl-tRNA synthetase [Bacillus selenitireducens MLS10] Length = 662 Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust. Identities = 226/522 (43%), Positives = 340/522 (65%), Gaps = 15/522 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E+ YI+T I YP+A+ HIGHAY + D +AR+ RL G DV + TGTDEHGQKI + A Sbjct: 4 EKNTFYITTPIYYPSAKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIEQKA 63 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + G + + FVD S + +++ LDISYDDFIRTTE RH + ++++ ++GDIY Sbjct: 64 EENGKSPQQFVDDISSDIQELWKKLDISYDDFIRTTEDRHKQVVQHIFERFLEQGDIYLD 123 Query: 123 CYSGWYSLRDEAYYND--------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE +Y + D+ G+ ++ H PV+ + E+ YFF++S Y D Sbjct: 124 EYEGWYSVSDETFYTELQLEDKEYDDNGNVTGGKSPDSGH-PVEKVREKSYFFKMSKYAD 182 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL+YYE +PEFI P R+NE+I+ F+K GL+DL++SR +F WG+ + DP++++YVWID Sbjct: 183 RLLAYYEDNPEFIQPESRKNEMINNFIKPGLEDLAVSRTSFRWGVPVKSDPEHVVYVWID 242 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + +G WPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF H Sbjct: 243 ALSNYITALGYSTDENGLFQSHWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 302 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+DP+ +IE G+DALRY+L+RE+ G DG + +G +RVN D Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVPLIERYGLDALRYYLLREVPFGSDGVFTPEGFVERVNYD 362 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++RSV+MI K +DG +P T DE++ + + ++ E+M+N Sbjct: 363 LANDLGNLLNRSVAMINKYFDGEVPAYVKDATSYDETLTDLVEATVNKVEESMENMQFSV 422 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL + L+S ++Y D +PW L K T ++ +VL+ VE +RQ++I+LQ F+ + Sbjct: 423 ALTAIGQLISRTNKYIDETQPWILAKDETAREQLGSVLHHLVESLRQVSIMLQPFMTETP 482 Query: 471 NKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 KI + L + D + +L ++ G + +PIFPR Sbjct: 483 KKIQEQLSIPDSLMGWDTLVTFGQIPAGKKVVAKGEPIFPRL 524 >gi|312128513|ref|YP_003993387.1| methionyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] gi|311778532|gb|ADQ08018.1| methionyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] Length = 653 Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust. Identities = 228/517 (44%), Positives = 335/517 (64%), Gaps = 12/517 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E+ K YI+T I YP+ + HIGH Y + AD +AR+ RL G DV F TGTDEHGQKI + A Sbjct: 2 EKPKFYITTPIYYPSEKLHIGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 Q G T + +VD+ + +D+ +++ISYDDFIRTTE RH + ++ K+ ++GDIYK Sbjct: 62 QEVGKTPQEYVDEIVASIKDLWKLMNISYDDFIRTTEDRHKKVVQKIFTKLYEQGDIYKS 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E+++ D ++ DG+ + PV+ EE YFFRLS YQD L+ Y E Sbjct: 122 EYEGWYCTPCESFWLDRQL---VDGKCPDCGR-PVERAREESYFFRLSKYQDALVKYIEE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HP+FI+P R NE+I+ F+K GL+D+ +SR T WGI +P DP++++YVWIDAL+NY+T Sbjct: 178 HPDFIVPQSRANEMINNFIKPGLEDVCVSRTTIKWGIPVPFDPKHVIYVWIDALSNYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY+ D K+WPAD+H++GK+I+RFH I WPA L++ LPLPK VF HG++L +G Sbjct: 238 LGYMSEDDSKFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKMVFGHGWLLLEGG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ + ++ GVD+LRYFL+REI G DG + +D LK R N+DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVILAQKYGVDSLRYFLLREIPFGADGHFSEDALKTRHNSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 +SR+V+MI K +DG+I + D ++++ V +++ + + AL ++ L+ Sbjct: 358 LSRTVAMIEKYFDGIIHLTEEKEDLDNELITLAKEVYEKVCKCLDELQFSNALIEIWKLI 417 Query: 422 SEVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + ++Y D PW L K+ R TVLY EV+R +AIL++ F+P+ KI L + Sbjct: 418 ARANKYIDETMPWVLGRDKSKYPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKILQQLGI 477 Query: 480 A-DENRCFQSLDQRLKPGFMLHKT----FDPIFPRFL 511 + DEN + + + G + T +PIFPR + Sbjct: 478 SKDENPDITAWESASQFGLIPEGTKVQRGEPIFPRIV 514 >gi|323701662|ref|ZP_08113334.1| methionyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] gi|323533435|gb|EGB23302.1| methionyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] Length = 514 Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust. Identities = 223/509 (43%), Positives = 323/509 (63%), Gaps = 7/509 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + YI+T I YP+ + HIGHAY + AD +ARF RL G DV F TG+DEHGQKI +AA+ Sbjct: 3 KPTFYITTPIYYPSDKLHIGHAYTTVAADAMARFKRLTGYDVWFLTGSDEHGQKIERAAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 T K +VD F+ + LD+SY+DFIRTT++RH + +++++ D+GDIYK Sbjct: 63 AKNQTPKEYVDHIVDGFKKLWSRLDVSYNDFIRTTDERHRKVVQQIFQQLYDQGDIYKSE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E ++ + Y+ +G+ + Q V+ + EE YFFR S Y ++ L + E + Sbjct: 123 YEGWYCTPCETFFTE---YQLVEGKCPDCQRE-VEKVREESYFFRQSKYAERWLKFIEEN 178 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P+ RRNE++SFVK GL+DL +SR TFDWGI +P DP++++YVW+DALTNY++ G Sbjct: 179 PDFIQPVSRRNEMVSFVKQGLEDLCVSRTTFDWGIPVPFDPKHVVYVWVDALTNYISALG 238 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D KFWPAD+H++GKDI+RFH I WP L++ NLPLPKKV HG++L K+ Sbjct: 239 YGSEDDSLYRKFWPADIHLVGKDIVRFHTIIWPIMLMALNLPLPKKVIGHGWLLLDSGKM 298 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP ++++ GVDA+RYFL+RE+ G DG Y ++ L KR+N DLAN GNL+S Sbjct: 299 SKSKGNVVDPHTLVDKYGVDAVRYFLLRELPFGSDGLYSEEALVKRINTDLANDYGNLLS 358 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS +M+ K +G++ PG D ++ + + + E M I ALA + LV Sbjct: 359 RSATMVQKYQEGVLQAPGPAAGPDAELIDLAINTPKLVAEYMDKSEISNALAAIWQLVGR 418 Query: 424 VDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD- 481 ++Y + PW L K P+R +TVLY EV+R + I+ F+P L +++ L +AD Sbjct: 419 ANKYLEETAPWSLAKAGQPERLNTVLYNVAEVVRFVTIMASPFMPNLPQRVWPQLGIADK 478 Query: 482 -ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 E ++SL P + + +FPR Sbjct: 479 PELHTWESLRWGSLPAGTTVQRGEVLFPR 507 >gi|167629315|ref|YP_001679814.1| methionyl-tRNA synthetase [Heliobacterium modesticaldum Ice1] gi|167592055|gb|ABZ83803.1| methionyl-tRNA synthetase [Heliobacterium modesticaldum Ice1] Length = 668 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 226/520 (43%), Positives = 327/520 (62%), Gaps = 11/520 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + R YI+T I YP+ PHIGHAY + D +AR+ RL G DV F TG DEHGQKI +A Sbjct: 4 QPRPTFYITTPIYYPSGNPHIGHAYTTVATDTMARYKRLRGCDVWFLTGLDEHGQKIERA 63 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 AQ G+ ++D + F+ + + L+I+YDDFIRTTE+RH +++++KI DKGDIYK Sbjct: 64 AQGKGMAPIDYLDPVAVTFKKLWERLEITYDDFIRTTEERHKKAVQVIFQKIWDKGDIYK 123 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180 Y GWY EA++ + ++ G G+ + PV+ M+EE YFFR+S Y D+LL + Sbjct: 124 SEYEGWYCTPCEAFWPERQLKIGEKGEKLCPDCDRPVERMKEESYFFRMSKYADRLLQHI 183 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E +PEFI P+ RRNE++SF+K GL+DL +SR TF WGI +P + +++YVW DAL+NY+T Sbjct: 184 EENPEFIQPVSRRNEMVSFIKQGLEDLCVSRTTFKWGIPVPINANHVIYVWFDALSNYIT 243 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY + D ++WPAD+H++GKDI+RFH I WP L++ PLPK+VFSHG+ L + Sbjct: 244 ALGYGSDDDEKYRRYWPADIHLVGKDIVRFHTIIWPIILMALGEPLPKQVFSHGWFLLES 303 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKS GNV+DP + + GVDA RYFL+RE+ G+D + ++ L R+N DLAN +GN Sbjct: 304 GKMSKSKGNVVDPFMLADRYGVDAFRYFLIREMIGGQDALFSEETLISRINTDLANDLGN 363 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 L+ RS+SM+ + G++ P A E ++ I + ++ + + M + A + + Sbjct: 364 LLHRSLSMVERFSGGIVRAPEAAAEGPLEKEIRELTAKTVADFGALMDRFELANAHSALW 423 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 L+ +++Y D + PW L K +A VLY VE +R AILLQA +P +A KIF Sbjct: 424 KLIGRMNKYIDERAPWSLAKKPEAKAELEAVLYTMVESLRITAILLQAAMPNVAGKIFAQ 483 Query: 477 LFVADENR---CFQSLDQR---LKPGFMLHKTFDPIFPRF 510 L ++ ENR C + D L P + DPIFPR Sbjct: 484 LGLSGENRPASCLMTWDAARWGLFPDGVKVAKGDPIFPRI 523 >gi|328551739|gb|AEB22231.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens TA208] gi|328909999|gb|AEB61595.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens LL3] Length = 663 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 224/522 (42%), Positives = 337/522 (64%), Gaps = 14/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI + Sbjct: 3 QENNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD+ + + LDIS+DDFIRTTE RH + +++K+ D GDIY Sbjct: 63 AEEENITPQAYVDRAVAEIQKLWKQLDISHDDFIRTTESRHKEIIEKVFQKLLDNGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE +Y + + V + G+ + +PV+ ++EE YFFR+S Y D Sbjct: 123 DEYEGWYSIPDETFYTETQLVDVERNEKGEVVGGKSPDSGHPVELIKEESYFFRMSKYAD 182 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR TFDWG+K+P +P++++YVWID Sbjct: 183 RLLKFYEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGNPKHVVYVWID 242 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK+VF+H Sbjct: 243 ALFNYITALGYDTENDELYKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+DP+ +IE G+D LRY+L+RE+ G DG + +G +R+N D Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K +DG I + G T+ D+ + SV +Q + M+N Sbjct: 363 LANDLGNLLNRTVAMIQKYFDGEIGSYEGNVTDFDQELSSVAGETVQAYEKAMENMEFSV 422 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKL 469 AL+ + L+S ++Y D PW L K +P++ +V+Y E +R A+LLQ F+ + Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAK-DPEKEKELRSVMYHLAESLRISAVLLQPFLTQT 481 Query: 470 ANKIFDILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510 K+F L V D++ + + S+ + K +P+FPR Sbjct: 482 PEKMFAQLGVEDQSLKAWDSIQTFGQLKSTKVKKGEPLFPRL 523 >gi|308171929|ref|YP_003918634.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|307604793|emb|CBI41164.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] Length = 663 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 224/522 (42%), Positives = 337/522 (64%), Gaps = 14/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI + Sbjct: 3 QENNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD+ + + LDIS+DDFIRTTE RH + +++K+ D GDIY Sbjct: 63 AEEENITPQAYVDRAVAEIQKLWKQLDISHDDFIRTTESRHKEIIEKVFQKLLDNGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE +Y + + V + G+ + +PV+ ++EE YFFR+S Y D Sbjct: 123 DEYEGWYSIPDETFYTETQLVDVERNEKGEVVGGKSPDSGHPVELIKEESYFFRMSKYAD 182 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR TFDWG+K+P +P++++YVWID Sbjct: 183 RLLKFYEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGNPKHVVYVWID 242 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK+VF+H Sbjct: 243 ALFNYITALGYDTENDELYKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+DP+ +IE G+D LRY+L+RE+ G DG + +G +R+N D Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K +DG I + G T+ D+ + SV +Q + M+N Sbjct: 363 LANDLGNLLNRTVAMIQKYFDGEIGSYEGNVTDFDQELSSVAGETVQAYEKAMENMEFSV 422 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKL 469 AL+ + L+S ++Y D PW L K +P++ +V+Y E +R A+LLQ F+ + Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAK-DPEKEKELRSVMYHLAESLRISAVLLQPFLTQT 481 Query: 470 ANKIFDILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510 K+F L V D++ + + S+ + K +P+FPR Sbjct: 482 PEKMFAQLGVEDQSLKAWDSIQTFGQLKSTKVKKGEPLFPRL 523 >gi|56418566|ref|YP_145884.1| methionyl-tRNA synthetase [Geobacillus kaustophilus HTA426] gi|56378408|dbj|BAD74316.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Geobacillus kaustophilus HTA426] Length = 650 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 225/514 (43%), Positives = 336/514 (65%), Gaps = 10/514 (1%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E++ Y++T I YP+ + HIGHAY + D +AR+ R+ G DV++ TGTDEHGQKI + A Sbjct: 2 EKKTFYLTTPIYYPSDRLHIGHAYTTVAGDAMARYKRMRGYDVMYLTGTDEHGQKIQRKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + GVT + +VD+ +++ LDISYDDFIRTT++RH ++ ++ ++GDIY G Sbjct: 62 EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEQIFTRLVEQGDIYLG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E++Y + ++ DG + PV+ ++EE YFFR+S Y D+LL YYE Sbjct: 122 EYEGWYCTPCESFYTERQL---VDGNCPDC-GRPVEKVKEESYFFRMSKYVDRLLQYYEE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +P+FI P R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDAL NY+T Sbjct: 178 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVIYVWIDALANYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY + D K+WPAD+H++GK+I+RFH IYWP L++ LPLPKKVF HG++L K Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIVRFHTIYWPIILMALGLPLPKKVFGHGWLLMKDG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFIERINYDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 + R+V+MI K +DG+IP G T D+ ++ V+++ E M+ ALA V L Sbjct: 358 LHRTVAMIEKYFDGVIPPYRGPKTPFDQELVQTAREVVRQYEEAMEGMEFSVALAAVWQL 417 Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 +S ++Y D +PW L K D + V+ E +R A+LLQ F+ + ++F L Sbjct: 418 ISRTNKYIDETQPWVLAKDEQKRDELAAVMTHLAESLRHTAVLLQPFLTRTPERMFAQLG 477 Query: 479 VADEN-RCFQSL-DQRLKPGFMLHKTFDPIFPRF 510 + D + + + SL D L P + +P+FPR Sbjct: 478 ITDHSLKEWDSLYDFGLIPEGTKVQKGEPLFPRL 511 >gi|261417531|ref|YP_003251213.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|319765188|ref|YP_004130689.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC52] gi|261373988|gb|ACX76731.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|317110054|gb|ADU92546.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC52] Length = 650 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 224/514 (43%), Positives = 336/514 (65%), Gaps = 10/514 (1%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E++ Y++T I YP+ + HIGHAY + D +AR+ R+ G DV++ TGTDEHGQKI + A Sbjct: 2 EKKTFYLTTPIYYPSDRLHIGHAYTTVAGDAMARYKRMRGYDVMYLTGTDEHGQKIQRKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + GVT + +VD+ +++ LDISYDDFIRTT++RH ++ ++ ++GDIY G Sbjct: 62 EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEQIFTRLVEQGDIYLG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E++Y + ++ DG + PV+ ++EE YFFR+S Y D+LL YYE Sbjct: 122 EYEGWYCTPCESFYTERQL---VDGNCPDCG-RPVEKVKEESYFFRMSKYVDRLLQYYEE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +P+FI P R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDAL NY+T Sbjct: 178 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVIYVWIDALANYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY + D K+WPAD+H++GK+I+RFH IYWP L++ LPLPKKVF HG++L K Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFGHGWLLMKDG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFIERINYDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 + R+V+MI + +DG+IP G T D+ ++ V+++ E M+ ALA V L Sbjct: 358 LHRTVAMIERYFDGVIPPYRGPKTTFDQELVQTAREVVRQYEEAMEGMEFSVALAAVWQL 417 Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 +S ++Y D +PW L K D + V+ E +R A+LLQ F+ + ++F L Sbjct: 418 ISRTNKYIDETQPWVLAKDEQKRDELAAVMTHLAESLRHTAVLLQPFLTRTPERMFAQLG 477 Query: 479 VADEN-RCFQSL-DQRLKPGFMLHKTFDPIFPRF 510 + D + + + SL D L P + +P+FPR Sbjct: 478 ITDHSLKEWDSLYDFGLIPEGTKVQKGEPLFPRL 511 >gi|165872552|ref|ZP_02217184.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|227812711|ref|YP_002812720.1| methionyl-tRNA synthetase [Bacillus anthracis str. CDC 684] gi|254756363|ref|ZP_05208392.1| methionyl-tRNA synthetase [Bacillus anthracis str. Vollum] gi|164711680|gb|EDR17225.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|227004168|gb|ACP13911.1| methionine--tRNA ligase [Bacillus anthracis str. CDC 684] Length = 660 Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust. Identities = 227/523 (43%), Positives = 343/523 (65%), Gaps = 16/523 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ + G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKCMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DIS DDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISCDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 302 GWILMKDGKMSKSKGNVVDPVILIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K ++G IP A TE DE++++ L+++ E M+N Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + LVS ++Y D +PW L K DR ++V+ EV+RQ I+L F+ Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDEDDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481 Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +K+F L + DE + + SL + G + K PIFPR Sbjct: 482 SKMFAQLGLTDEAHTSWGSLSTIGCIPAGTKVEKG-QPIFPRL 523 >gi|311070685|ref|YP_003975608.1| methionyl-tRNA synthetase [Bacillus atrophaeus 1942] gi|310871202|gb|ADP34677.1| methionyl-tRNA synthetase [Bacillus atrophaeus 1942] Length = 664 Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust. Identities = 224/524 (42%), Positives = 338/524 (64%), Gaps = 18/524 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +++ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI + Sbjct: 3 QDKNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + +VD+ + + + + L+IS DDFIRTTE RH +++K+ D GDIY Sbjct: 63 AEEENITPQEYVDRAAADIQKLWKQLEISNDDFIRTTESRHKVVIEKVFQKLFDNGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE +Y + + + + G+ + +PV+ ++EE YFFR+S Y D Sbjct: 123 DEYEGWYSIPDETFYTETQLVDIERNEKGEVVGGKSPDSGHPVELIKEESYFFRMSKYAD 182 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL++YE +P FI P R+NE+I+ F+K GL+DL++SR TFDWG+K+P +P++++YVWID Sbjct: 183 RLLAFYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGNPKHVVYVWID 242 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NYLT G+ D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK+VF+H Sbjct: 243 ALFNYLTALGFDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+DP+ +IE G+D LRY+L+RE+ G DG + +G +R+N D Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K +DG + + G TE D+++ SV ++ M+N Sbjct: 363 LANDLGNLLNRTVAMINKYFDGNLGSYEGTITEFDQTLSSVAEETVKSYERAMENMEFSV 422 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + L+S ++Y D PW L K +V+Y E +R A+LLQ F+ K Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAKDPAKEKELQSVMYHLAESLRISAVLLQPFLTKTP 482 Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510 K+F+ L + DE ++ D + G L+KT DP+FPR Sbjct: 483 KKMFEQLGITDE--TLKAWDSITRFG-QLNKTKVQKGDPLFPRL 523 >gi|288554646|ref|YP_003426581.1| methionyl-tRNA synthetase [Bacillus pseudofirmus OF4] gi|288545806|gb|ADC49689.1| methionyl-tRNA synthetase [Bacillus pseudofirmus OF4] Length = 666 Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust. Identities = 223/524 (42%), Positives = 342/524 (65%), Gaps = 16/524 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E + Y++T I YP+A+ HIGHAY + D +AR+ RL G DV + TGTDEHGQKI + Sbjct: 1 MSENKTFYLTTPIYYPSAKLHIGHAYTTVAGDAMARYKRLRGYDVRYLTGTDEHGQKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A G+T + FVD+ + + + LDISYDDFIRTTE RH + +++++ ++GDIY Sbjct: 61 KAAEKGLTPQQFVDEIVADIQSLWKKLDISYDDFIRTTEDRHKKVVQTIFERLLEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYND--------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y GWYS+ DE +Y + DE K G+ ++ H PV+ + E+ YFF++S Y Sbjct: 121 LDEYEGWYSIPDETFYTELQLVDPIRDEDGKIIGGKSPDSGH-PVEKVREQSYFFKMSKY 179 Query: 173 QDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231 D+LL +YE +P FI P RRNE+I+ F+K GL+DL++SR +F WG+++P +P++++YVW Sbjct: 180 ADRLLKFYEENPTFIQPESRRNEMINNFIKPGLEDLAVSRTSFKWGVQVPSNPEHVVYVW 239 Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291 IDAL+NY+T GY + D K+WPA++H++GK+I+RFH IYWP L++ +LPLPKKVF Sbjct: 240 IDALSNYITALGYGQDNDEFYQKYWPANVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVF 299 Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 +HG++L K K+SKS GNV+DP +I+ G+DALRY+L+RE+ G DG + +G +RVN Sbjct: 300 AHGWLLMKDGKMSKSKGNVVDPETLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERVN 359 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLI 410 DLAN +GNL++R+V+MI K +DG IPT T D +L + + + ++ M+ Sbjct: 360 YDLANDLGNLLNRTVAMINKYFDGSIPTYVKDATPFDADLLDLVNATVTKVENAMEEMEF 419 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPK 468 AL + LVS ++Y D +PW L K + + +V+Y E +R +++L+Q F+ + Sbjct: 420 SVALTAIWQLVSRTNKYIDETQPWMLAKDDSKKEELGSVMYHLAESLRYISVLIQPFLTE 479 Query: 469 LANKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 K+++ L + +E ++SL + ++ G + K PIFPR Sbjct: 480 TPKKVWEQLGLGEEVTTWESLSEFAQIPAGVTVQKG-KPIFPRL 522 >gi|217077634|ref|YP_002335352.1| methionyl-tRNA synthetase [Thermosipho africanus TCF52B] gi|217037489|gb|ACJ76011.1| methionyl-tRNA synthetase [Thermosipho africanus TCF52B] Length = 638 Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust. Identities = 217/504 (43%), Positives = 333/504 (66%), Gaps = 15/504 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I Y N++PHIG AY II D++AR+ RL G +V + TGTDEHGQKI +AA+ Sbjct: 2 KKFYITTPIYYVNSEPHIGSAYTTIIGDIIARYKRLMGYEVFYLTGTDEHGQKIMQAAKK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G T + D+ S+ F + L I+ D FIRTT++ H T + K+ + DIYKG Y Sbjct: 62 QGKTPQQLCDELSKKFEQLWKDLKITNDYFIRTTDEEHIKTVQFFVSKMLENEDIYKGKY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY + E Y+++DE+ K + + H P+ ++EEE YFFRLS Y + LL +++ + Sbjct: 122 KGWYCVPCETYWSEDEIEKDENNNPVCPSCHRPLNFVEEENYFFRLSKYTEPLLKHFKEN 181 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+F+ P R+NE++ ++ GLKDLS++R TFDWGI +P+DP++++YVW+DAL NY++ G Sbjct: 182 PDFVEPEFRKNEMLKILEEGLKDLSITRTTFDWGIPMPNDPKHVIYVWVDALINYISAIG 241 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y + + K K+WPADLH+IGK+I RFH++ WPA L+S LPLPKK+F+HG++ G+KI Sbjct: 242 YGKDEETFK-KWWPADLHLIGKEINRFHSLIWPAMLMSVGLPLPKKIFAHGWLTVNGQKI 300 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGN IDP E +++ G D +RY+L R+I GKDG + ++ L R+N+DLAN GNL+ Sbjct: 301 SKSLGNAIDPREFVKKYGNDVIRYYLARDIVFGKDGDFSEENLVNRLNSDLANDYGNLLH 360 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+++M++K++D IPTP + ESD+ ++ + +E E M++ + AL + S + + Sbjct: 361 RTLAMVVKNFDSKIPTPSSLNESDKELIEKFKNLKKEYTEYMESYKLTNALESIWSYIRD 420 Query: 424 VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 V++YFD KPW L K+ N +R T+LY T+E ++A LL F+P + ++ Sbjct: 421 VNKYFDENKPWVLAKEGNKERLGTILYNTLEAFIKIASLLLPFMPDSSKEV--------- 471 Query: 483 NRCFQSLDQRLKPGFMLHKTFDPI 506 F+ L Q P F+L+ ++ + Sbjct: 472 ---FRRLGQEFNPEFVLNTEWNSL 492 >gi|255659102|ref|ZP_05404511.1| methionine--tRNA ligase [Mitsuokella multacida DSM 20544] gi|260848546|gb|EEX68553.1| methionine--tRNA ligase [Mitsuokella multacida DSM 20544] Length = 650 Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust. Identities = 217/479 (45%), Positives = 322/479 (67%), Gaps = 6/479 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+A+ HIGHAY IAD +ARFHRL G DV F TG+DEHGQKI + Sbjct: 1 MTEKKPFYITTPIYYPSAKLHIGHAYCTTIADSIARFHRLIGDDVFFLTGSDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AGVT +VD+ F+++ L IS DDFIRTT+KRH + ++ +I KGDIY Sbjct: 61 KAEEAGVTPIEYVDKIVAGFQNLWKRLHISNDDFIRTTQKRHERVVQEIFNRIYAKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y E+Y+ + ++ +G + H PVQ + EE YFF++S Y D++L Y Sbjct: 121 KGAYKGLYCTPCESYWTEHQL--DENGCCPDC-HRPVQEVSEEAYFFKMSKYADRVLQYI 177 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E HP+FI P+ RRNE+I+F+K GL DL +SR +F+WGI +P DP++++YVW DALTNYLT Sbjct: 178 EDHPDFIQPVSRRNEMINFIKQGLDDLCISRTSFNWGIPVPIDPKHVIYVWFDALTNYLT 237 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 G+LD P+ K+WPADLH++GK+I+RFH I WP L++ +LPLPKKV+ HG+++ G Sbjct: 238 PIGFLDAPEKFH-KYWPADLHLVGKEIVRFHTIIWPCILMALDLPLPKKVYGHGWLIVDG 296 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKS GNV+DP +I+E G DA+RYFL+REI G+DG + +D L +R+N+DLAN +GN Sbjct: 297 DKMSKSKGNVVDPNGLIDEFGADAIRYFLLREINLGQDGNFSRDALIQRINSDLANDLGN 356 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+ R+++M +K +G++ P +E D+S+ + + +NM++ + + +V + Sbjct: 357 LLHRTLNMTIKFQNGVLLAPQGESEVDKSLKADAKETVDFFEKNMKDMQLSATIKKVWAF 416 Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +S ++Y D PW L K + V+Y E +R +++L+ F+P A +I+ L Sbjct: 417 ISRANKYIDETTPWALAKDPAKKQELANVMYNLAESLRIISVLISPFMPVTAERIWKQL 475 >gi|213019168|ref|ZP_03334975.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995277|gb|EEB55918.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 472 Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust. Identities = 229/475 (48%), Positives = 318/475 (66%), Gaps = 9/475 (1%) Query: 39 RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98 +L G +V FTTGTDEHGQKI KAA+ G+ K F D+ S FR +A++++ YDDFIRTT Sbjct: 2 KLAGKNVKFTTGTDEHGQKIEKAAKTKGIEPKEFTDEISVTFRKLAELMNFDYDDFIRTT 61 Query: 99 EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158 E+RH LW ++ ++G IY YSGWYS+RDEA+Y + E+ G VQ Sbjct: 62 EERHEKAVIALWNRLEERGQIYLDSYSGWYSVRDEAFYQESELIYGR-----APTGAEVQ 116 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 W++EE YFFRLS++Q+KLL YE+ P FI P R+NEV+SFVKSGL DLS+SR +F+WGI Sbjct: 117 WIKEESYFFRLSSWQNKLLELYENQPNFIFPESRKNEVVSFVKSGLTDLSISRTSFNWGI 176 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA--DLHVIGKDILRFHAIYWP 276 K+P++ ++++YVWIDALTNYLT+ G+ + D KFW ++HVIGKDILRFHA+YWP Sbjct: 177 KVPENDKHVIYVWIDALTNYLTSIGFPNIEDEEYKKFWTNSFNVHVIGKDILRFHAVYWP 236 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 A LL+A+LPLPK++ HG+ L++GEKISKSLGNVIDPI + EE GVD LRYFL+RE + G Sbjct: 237 AILLAADLPLPKQIAVHGWWLNEGEKISKSLGNVIDPINLAEEFGVDQLRYFLLREASFG 296 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396 +DG + K + R+N++LAN IGNLV R++S + K G++P D+ L C Sbjct: 297 QDGNFSKKNMISRINSELANNIGNLVQRTISFLHKQCFGVVPVVDRNLLKDDESLPNCKA 356 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 ++ ++ +++ ++ + +I++ S+ + Y D PW L KT+ +R V+Y +E IR Sbjct: 357 IIDQVMDHLSKYEFNQIILLIINISSKANAYIDKSAPWTLSKTDRERMDLVIYKLLEYIR 416 Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510 + ILLQ VPK A I D L + E R +SL + + G L K PIF RF Sbjct: 417 MIGILLQPIVPKSAKMILDQLQIPKEQRDLKSLCNACVSLGITLPKP-TPIFLRF 470 >gi|121534360|ref|ZP_01666184.1| methionyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] gi|121307130|gb|EAX48048.1| methionyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] Length = 640 Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust. Identities = 232/514 (45%), Positives = 337/514 (65%), Gaps = 14/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+ YI+T I YP+ + HIGHAY IAD +AR+ RL G DV F TG+DEHGQKI + A+ Sbjct: 3 RKSFYITTPIYYPSDRLHIGHAYCTTIADAIARYKRLAGYDVFFLTGSDEHGQKIERKAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT +VD+ +F+ + + L+IS DDFIRTTE RH + + +++KI D+GDIYK Sbjct: 63 EHGVTPIEYVDKIVASFKHLWEKLNISNDDFIRTTETRHKEVVQSIFQKIYDQGDIYKAT 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E ++ + ++ DG+ + PV+ ++EE YFFRLS YQD+LL Y E + Sbjct: 123 YEGQYCTPCETFWLERQL---VDGKCPDCGR-PVELVQEESYFFRLSKYQDRLLQYIEEN 178 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNE+I+F+KSGL+DL +SR TFDWGI +P D ++++YVW DAL NY+T G Sbjct: 179 PDFIQPASRRNEMINFIKSGLEDLCVSRTTFDWGIPVPFDTKHVVYVWFDALVNYITAAG 238 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 YL + + K+WPAD+H++GK+I+RFH I WP L++ + LPK V+ HG+++ +G+K+ Sbjct: 239 YLHDREKFN-KYWPADVHLVGKEIVRFHTIIWPIILMALGIELPKMVYGHGWLVVEGDKM 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNVIDP+ +I+E G DA+RYFL++EI G DG + ++ L R+NADLAN +GNL+ Sbjct: 298 SKSKGNVIDPLALIDEFGADAIRYFLLKEITLGLDGNFSREALISRINADLANDLGNLLH 357 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R++SMI + G+I PGA D ++ + ++M+N I+ A+ +V L+ Sbjct: 358 RTLSMIGRFNGGVIEGPGANEPIDLELVELAQNTAAAYEKHMENMEINAAIKEVWGLIGR 417 Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++Y D PW L K T R +TVLY EV+R ++IL+ F+P+ A KI+ L + D Sbjct: 418 ANKYIDETAPWALAKDATKKSRLNTVLYNLAEVLRIVSILISPFMPQAAPKIWSQLGIED 477 Query: 482 ENRCFQSLDQ-----RLKPGFMLHKTFDPIFPRF 510 N LD +LK G ++K +PIFPR Sbjct: 478 -NFGNMRLDDAQRWGQLKAGTRVNKP-EPIFPRI 509 >gi|52078533|ref|YP_077324.1| methionyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52783895|ref|YP_089724.1| methionyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|319648562|ref|ZP_08002776.1| MetS protein [Bacillus sp. BT1B_CT2] gi|52001744|gb|AAU21686.1| methionyl-tRNA synthetase MetS [Bacillus licheniformis ATCC 14580] gi|52346397|gb|AAU39031.1| MetS [Bacillus licheniformis ATCC 14580] gi|317389329|gb|EFV70142.1| MetS protein [Bacillus sp. BT1B_CT2] Length = 662 Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust. Identities = 221/521 (42%), Positives = 335/521 (64%), Gaps = 12/521 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI + Sbjct: 3 QEKNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIQQT 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ +T + VD+ + + + + LDIS DDFIRTTE+RH +++K+ D GDIY Sbjct: 63 AEKENITPQELVDRAAEDIQQLWKKLDISNDDFIRTTEERHKKVIEKVFQKLLDNGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE +Y + + V + G+ + +PV+ ++EE YFFR+ Y D Sbjct: 123 DEYEGWYSIPDETFYTETQLVDVERNEKGEVIGGKSPDSGHPVELIKEESYFFRMGKYAD 182 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL++YE +PEFI P R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWID Sbjct: 183 RLLAFYEENPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVIYVWID 242 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T G+ D + K+WPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+H Sbjct: 243 ALFNYITALGFNTENDENYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAH 302 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N D Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINYD 362 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+M+ K +DG I + G T DE + S + ++ + ++N Sbjct: 363 LANDLGNLLNRTVAMVNKYFDGRIQSYEGPVTAFDEPLSSFSQKTIEAYEQAIENMEFSV 422 Query: 413 ALAQVISLVSEVDRYFDAQKPWELK--KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + VS ++Y D PW L K +V+Y E +R A+LLQ F+ + Sbjct: 423 ALSSLWQFVSRTNKYIDETAPWVLAKDKDKEKELQSVMYHLAESLRITAVLLQPFLTQTP 482 Query: 471 NKIFDILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510 KIF L V D + + + S+ + + + +P+FPR Sbjct: 483 EKIFAQLGVTDASLKTWDSIQSFGQLKSVTVQKGEPLFPRL 523 >gi|319654959|ref|ZP_08009033.1| methionyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] gi|317393384|gb|EFV74148.1| methionyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] Length = 654 Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust. Identities = 219/512 (42%), Positives = 334/512 (65%), Gaps = 14/512 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I YP+ HIGHAY + D +AR+ R+ G DV++ TGTDEHGQKI + A+ G Sbjct: 8 FYLTTPIYYPSGNLHIGHAYTTVAGDAMARYKRMRGFDVMYLTGTDEHGQKIQEKAEEKG 67 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + +VD+ +++ LDISYDDFIRTT+ RH ++ ++ ++GDIY G Y G Sbjct: 68 ITPQQYVDEIVAGIQELWKKLDISYDDFIRTTQDRHKQIVEKIFAQLVEQGDIYLGEYEG 127 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WY E+YY + ++ DG + PV ++EE YFF++S Y D+LL YYE +P F Sbjct: 128 WYCTPCESYYTERQL---VDGNCPDCGR-PVHKVKEESYFFKVSKYADRLLQYYEENPSF 183 Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 I P R+NE+I+ F+K GL+DL++SR TFDWG+K+P++P++++YVWIDAL+NY+T GY Sbjct: 184 IQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPNNPKHVVYVWIDALSNYITALGYG 243 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + D +WPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+HG++L K K+SK Sbjct: 244 TDDDSKYLNYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDGKMSK 303 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N DLAN +GNL++R+ Sbjct: 304 SKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFVERINFDLANDLGNLLNRT 363 Query: 366 VSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 ++M+ K +DG+IP+ + E D+ +L + + + E M+ AL+ V LVS Sbjct: 364 IAMVNKYFDGVIPSYKDSNGEFDQQLLQMNRETVSKYEEAMEKMEFSVALSAVWQLVSRT 423 Query: 425 DRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++Y D +PW L K R ++V+ E +R++A+LLQ F+ + ++F L V +E Sbjct: 424 NKYIDETQPWALAKEEEKREDLASVMAHLAESLRRIAVLLQPFLTRTPKEVFSQLNVNEE 483 Query: 483 NRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510 S + K G + T +PIFPR Sbjct: 484 --ALTSWESLEKFGLIPEGTKVLKGEPIFPRL 513 >gi|89101166|ref|ZP_01173999.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp. NRRL B-14911] gi|89084134|gb|EAR63302.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp. NRRL B-14911] Length = 653 Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust. Identities = 224/510 (43%), Positives = 331/510 (64%), Gaps = 10/510 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I YP+ HIGHAY + D +AR+ RL G DV++ TGTDEHGQKI + A+ G Sbjct: 8 FYLTTPIYYPSGNLHIGHAYTTVAGDAMARYKRLRGYDVMYLTGTDEHGQKIQQKAEEKG 67 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT + +VD+ +D+ LDISYDDFIRTT+ RH ++ ++ ++GDIY G Y G Sbjct: 68 VTPQEYVDEIVDGIKDLWSKLDISYDDFIRTTQDRHKQVVEKIFARLLEQGDIYLGEYEG 127 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WY E+Y+ + ++ DG + PV ++EE YFF++S Y D+LL YYE +P F Sbjct: 128 WYCTPCESYFTERQL---VDGNCPDCGR-PVNKVKEESYFFKVSKYADRLLKYYEENPHF 183 Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 I P R+NE+I+ F+K GL+DL++SR TFDWG+K+PD+P++++YVWIDAL+NY+T GY Sbjct: 184 IQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPDNPKHVVYVWIDALSNYITALGYG 243 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D +WPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+HG++L K K+SK Sbjct: 244 TEDDSKYLNYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDGKMSK 303 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S GNV+DP+ +I+ G+D+LRY+L+RE+ G DG + +G +RVN DLAN +GNL++R+ Sbjct: 304 SKGNVVDPVTLIDRYGLDSLRYYLLREVPFGADGVFTPEGFVERVNFDLANDLGNLLNRT 363 Query: 366 VSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 V+MI K +DG IP G+ E D+ +L + + + E M+ AL+ V LVS Sbjct: 364 VAMIEKYFDGTIPAYQGSEGEFDKQLLDMNKETVAKYEEAMEKMEFSVALSSVWQLVSRT 423 Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-AD 481 ++Y D +PW L K + V++ E +R+ +LL+ F+ + + IF+ L V + Sbjct: 424 NKYIDETQPWVLAKDEARKEELGNVMFHLAESLRRTGVLLKPFLTRTPDGIFNQLNVNTE 483 Query: 482 ENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510 E ++SL+ L P DPIFPR Sbjct: 484 ELTSWESLETFGLIPENTKVVKGDPIFPRL 513 >gi|167042815|gb|ABZ07533.1| putative tRNA binding domain protein [uncultured marine microorganism HF4000_ANIW137I15] Length = 665 Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust. Identities = 225/518 (43%), Positives = 320/518 (61%), Gaps = 23/518 (4%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E Y++T I Y N PHIGHAY I ADVLARFHRL G V TGTDEHGQK+ +AA + Sbjct: 3 ETFYVTTPIYYVNDYPHIGHAYTTIAADVLARFHRLAGTRVFLLTGTDEHGQKVERAALD 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + D+ + + D L I DDFIRTTE RH L++++ +KGDIY G Y Sbjct: 63 RGLTPQGLADRVVGRYHQLWDRLRIEPDDFIRTTEARHRKGVEDLFRRVQEKGDIYLGEY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY DE+++ + +V G + PV+ + EE YFFR+S YQD+LL + E HP Sbjct: 123 EGWYCTPDESFWTETQVVDGKCPEC----GRPVERVREESYFFRMSKYQDRLLRHLEEHP 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 FILP RRNEVI FV+ GL+DLS+SR TF WGI +P +++YVW DALTNY++ G+ Sbjct: 179 GFILPESRRNEVIRFVEGGLRDLSISRTTFQWGIPVPGGQGHVLYVWFDALTNYISALGF 238 Query: 245 LDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 + G FWPAD+H+IGKDILRFHA+YWP FL+SA LPLP++VF+HG+ +G+K+ Sbjct: 239 GEKNGGEGYETFWPADVHLIGKDILRFHAVYWPTFLMSAELPLPRRVFAHGWWTVEGQKM 298 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSL NV++P +++ G DA+RYFL+RE+ G+DG + + L KR+N+DLAN +GNL+ Sbjct: 299 SKSLRNVVEPNRLLDRYGADAVRYFLLREVPFGQDGNFSHEALIKRINSDLANDLGNLLH 358 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R++ M+ + G +P + + + +RE +++ R L +V + + Sbjct: 359 RTIGMVEQFCGGRLPRAAEVGDLERGLQQAAGATTAVLREELESLEFQRVLKKVWDFIRQ 418 Query: 424 VDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 V++Y DA+ PW L K+ + T LY E IR L++ L F+P A KI L +A+E Sbjct: 419 VNKYLDARAPWSLSKSGDEAGVRTTLYTAAEAIRVLSVWLWPFMPDAALKIRSRLGLAEE 478 Query: 483 N--------RCFQSLD--QRLKPGFMLHKTFDPIFPRF 510 + R + L+ + ++PG P+FPR Sbjct: 479 DPPRSLEEARTWGVLEAGREVQPG-------PPLFPRI 509 >gi|15612616|ref|NP_240919.1| methionyl-tRNA synthetase [Bacillus halodurans C-125] gi|25009402|sp|Q9KGK8|SYM_BACHD RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|10172665|dbj|BAB03772.1| methionyl-tRNA synthetase [Bacillus halodurans C-125] Length = 660 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 221/521 (42%), Positives = 337/521 (64%), Gaps = 12/521 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 KE++ Y++T I YP+ + HIGHAY + D +AR+ RL G +V++ TGTDEHGQKI + Sbjct: 3 KEQKTFYLTTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYNVMYLTGTDEHGQKIEQK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G+T K FVD+ +D+ LDISYDDFIRTTE+RH + +++++ D+GDIY Sbjct: 63 AEAKGLTPKQFVDEIVSGIQDLWKKLDISYDDFIRTTEERHIKVVQQIFEQLLDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQH----NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE +Y + ++ ADG + +PV+ + E+ YFFR+S Y D Sbjct: 123 GDYEGWYSIPDETFYTETQLVDKEYDADGNLIGGKSPDSGHPVEKVREQSYFFRMSKYAD 182 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +YE +P+FI P R+NE+I+ F+K GL+DL++SR +F WG+ +P DP++++YVWID Sbjct: 183 RLLQFYEENPQFIQPESRKNEMINNFIKPGLEDLAVSRTSFTWGVPVPRDPKHVVYVWID 242 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + +WPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF H Sbjct: 243 ALSNYITALGYGSDQQEKYENYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 302 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + + +RVN D Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVPLIDRYGLDALRYYLLREVPFGSDGVFTPEAFVERVNYD 362 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K +DG IP+ T D ++ + ++++ + M+ Sbjct: 363 LANDLGNLLNRTVAMIEKYFDGKIPSYVKDGTPFDADLVELVYSTVKKVEDAMEEMEFSI 422 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL + L+S ++Y D +PW L K R +Y E IR +++LLQ F+ K Sbjct: 423 ALTAIGQLISRTNKYIDETQPWVLAKDESKREQLGAAMYHLAESIRYVSVLLQPFMTKAP 482 Query: 471 NKIFDILFVADENRCFQSLDQRLK-PGFMLHKTFDPIFPRF 510 KI++ L + ++SL+ + PG + P+FPR Sbjct: 483 QKIWEQLGIDSSLTTWESLETFGQIPGNTNVQKGQPLFPRL 523 >gi|135148|sp|P23920|SYM_BACST RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|39989|emb|CAA40999.1| methionine--tRNA ligase [Geobacillus stearothermophilus] Length = 649 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 225/516 (43%), Positives = 329/516 (63%), Gaps = 14/516 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E++ Y++T I YP+ + HIGHAY + D +AR+ RL G DV++ TGTDEHGQKI + A Sbjct: 2 EKKTFYLTTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDVMYLTGTDEHGQKIQRKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 Q GVT + +VD +++ LDISYDDFIRTT++RH ++ ++ ++GDIY G Sbjct: 62 QEKGVTPQQYVDDIVAGIQELWRKLDISYDDFIRTTQERHKKIVEKIFARLVEQGDIYLG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E++Y + ++ DG + PV+ ++EE YFFR+S Y D+LL YYE Sbjct: 122 EYEGWYCTPCESFYTERQL---VDGNCPDC-GRPVEKVKEESYFFRMSKYVDRLLQYYEE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +P+FI P R+NE+I+ F+K GL+DL++SR TFDWGIK+P DP++++YVWIDAL NY+T Sbjct: 178 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALANYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY + D K+WPAD+H++GK+I+RFH IYWP L++ LPLPKKVF HG++L K Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFGHGWLLMKDG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVMIIDRYGLDALRYYLLREVPFGSDGVFTPEGFIERINYDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 + R+V+MI K + G IP G T D + V+++ E M+ AL+ V L Sbjct: 358 LHRTVAMIEKYFGGAIPPYRGPKTPFDRDLSETAREVVRQYEEAMERMEFSVALSAVWQL 417 Query: 421 VSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 + ++Y D +PW L K R ++V+ E +R A+LLQ F+ + +IF L Sbjct: 418 IGRTNKYIDETQPWVLAKEESKREELASVMAHLAESLRYTAVLLQPFLTRTPERIFTQLG 477 Query: 479 VADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510 ++D R + D G + T +P+FPR Sbjct: 478 ISD--RSLKEWDSLYDFGLIPEGTNVQKGEPLFPRL 511 >gi|315301039|ref|ZP_07872357.1| methionyl-tRNA synthetase [Listeria ivanovii FSL F6-596] gi|313630592|gb|EFR98407.1| methionyl-tRNA synthetase [Listeria ivanovii FSL F6-596] Length = 664 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 227/522 (43%), Positives = 341/522 (65%), Gaps = 13/522 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 4 EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD+ + F+++ L+IS DFIRTT+ RH + +++++ ++GDIY Sbjct: 64 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVAKIFEQLVEQGDIYL 123 Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + +EVYK G+ + N V+ ++EE YFFR+S Y D+ Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDESGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L+ YY SHPEFILP R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPK VF HG Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +IL K K+SKS GNV+DP +I+ G+DALRY+L+RE+ G DG + + RVN DL Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 363 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K ++G IP G T D++++ + V+ + ++M + A Sbjct: 364 ANDLGNLLNRTVAMINKYFNGEIPAYQGDVTPFDKTLVDFKNSVVLDYEKSMDHMQFSVA 423 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L Q+ SL+S ++Y D L K RA ++V+ E +R +A+LLQ F+ + Sbjct: 424 LNQLWSLISRTNKYIDETAXXALAKEEEKRAELASVMTHLAENLRIIAVLLQPFLTRTPG 483 Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 +IF L + +EN + + S+ + G + K PIFPR Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 525 >gi|310830112|ref|YP_003962469.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612] gi|308741846|gb|ADO39506.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612] Length = 648 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 222/515 (43%), Positives = 334/515 (64%), Gaps = 10/515 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M+E++ Y++T I YP+ HIGH Y + AD L RF +L G D F TGTDEHGQKI K Sbjct: 2 MEEKKTFYVTTPIYYPSGDLHIGHTYTTVAADTLTRFKKLTGYDAYFLTGTDEHGQKIQK 61 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ GVT + +VD +++ +++I+YD FIRTT+ H T + ++KK+ D+GDIY Sbjct: 62 AAEEKGVTPQAYVDDVVGRIKELWKLMNINYDQFIRTTDPEHEKTIQQIFKKLYDQGDIY 121 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y GWY E+++ + ++ DG + PV+ EE YFF++S Y D+LL Y Sbjct: 122 KGKYEGWYCTPCESFWTESQL---VDGNCPDCGR-PVEKASEEAYFFKMSKYADRLLKYI 177 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 E HP+FI P R+NE+I+ F+K GL+DL +SR +F WG+ + DP +++YVWIDAL NY+ Sbjct: 178 EDHPDFIQPESRKNEMINNFIKPGLQDLCVSRTSFSWGVPVTFDPGHVVYVWIDALPNYI 237 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 + GYL++ K+WPA++H++GKDI+RFH IYWP L++ +LPLP+ V+ HG+IL K Sbjct: 238 SALGYLNDKPQLMDKYWPANVHLVGKDIIRFHTIYWPIILMALDLPLPEHVYGHGWILLK 297 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKS+GNV+DP+E+ E+ GVDALRY ++RE+ G DG Y++D L +N+DLAN +G Sbjct: 298 GGKMSKSVGNVVDPVELAEKYGVDALRYHVLREMTYGADGIYNEDLLVSHINSDLANDLG 357 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL+SR+V+M +K +DG+IP + D ++++ + + M RAL V Sbjct: 358 NLLSRTVAMTVKYFDGVIPAERESGDFDAELIALAEETPGVVEDYMNKLDFSRALEAVWK 417 Query: 420 LVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 LVS ++Y D +PW L K +P+ R + V+Y E +R +++L+ + +P KI D Sbjct: 418 LVSRTNKYIDETQPWVLIK-DPEKKARLAMVMYNLTESLRIISVLVSSAMPDTGVKIADE 476 Query: 477 LFVADENRCFQSLDQRLK-PGFMLHKTFDPIFPRF 510 L V +E R ++S+ K P + + +PIFPR Sbjct: 477 LKVPEELRTWESIQSFGKYPDGIQVERCEPIFPRI 511 >gi|260584776|ref|ZP_05852521.1| methionine--tRNA ligase [Granulicatella elegans ATCC 700633] gi|260157433|gb|EEW92504.1| methionine--tRNA ligase [Granulicatella elegans ATCC 700633] Length = 670 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 231/523 (44%), Positives = 337/523 (64%), Gaps = 15/523 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++++ Y++T I YP+ Q HIGHAY + +D + R+ +L G D F TGTDEHGQKI + Sbjct: 3 EDKKTFYLTTPIYYPSGQLHIGHAYTTVASDAMIRYKKLQGYDTYFLTGTDEHGQKIQQK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 AQ AGV+ FVD +D+ LD+SYDDFIRTT+ RH + + +++K+ D GDIY Sbjct: 63 AQEAGVSEIEFVDNIIFGIQDLWKKLDVSYDDFIRTTQPRHKKSVQKIFQKLMDNGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + EVY+ ADG+ + VQ ++EE YFFR+S Y D+ Sbjct: 123 GEYEGWYSVSDEEYFTESQLVEVYRDADGKMIGGVAPSGHEVQLVKEESYFFRMSKYADR 182 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 LL YYE HPEFI P R+NE+I+ F+K GL+DL++SR +FDWGI +P+DP++++YVWIDA Sbjct: 183 LLQYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIPVPNDPKHVIYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + + ++WPAD+H IGK+I+RFH IYWP L++ +LPLPKK+F+HG Sbjct: 243 LSNYITALGYGSDDETLFNRYWPADVHFIGKEIVRFHTIYWPIMLMALDLPLPKKIFAHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 ++L K K+SKS GNV+DP +IE G+DALRY+L+RE+ G DG + + +R+N DL Sbjct: 303 WLLMKDGKMSKSKGNVVDPNTLIERYGLDALRYYLLREVPFGSDGIFTPESFVERINYDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG IPT A S D ++ +++E+ M+ A Sbjct: 363 ANDLGNLLNRTVAMINKYFDGTIPTYSAPVSSFDHELVEASKVMIEEVEAAMEEMQFSVA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 L+ + VS ++Y D PW K + A T+ Y+ E +R +A+ LQ F+ + Sbjct: 423 LSAIWKFVSRTNKYIDETTPWAAVKDEARQEELARTMSYLA-ESLRIIAVALQPFLTQTP 481 Query: 471 NKIFDILFVADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +I L + DE R + SL + G + + PIFPR Sbjct: 482 GEILAQLGIHDEALRDYPSLHTFGVIPAGTTVVEKGQPIFPRL 524 >gi|313895444|ref|ZP_07829001.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] gi|312976339|gb|EFR41797.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] Length = 514 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 226/515 (43%), Positives = 331/515 (64%), Gaps = 11/515 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+A+ HIGHAY +AD +ARF RL G DV F TG+DEHGQKI + Sbjct: 1 MSEKTPFYITTPIYYPSAKLHIGHAYCTTVADTIARFKRLAGYDVFFLTGSDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ GVT + +VD+ F+++ +L ISYDDFIRT+E+RHH+ + ++++I D+GDIY Sbjct: 61 AAEKEGVTPQAYVDRIVAGFQELWQLLGISYDDFIRTSEERHHELVQNIFQQIYDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y E+Y+ E+ +G + H PVQ + EE YFFR+S Y D++L+Y Sbjct: 121 KGEYKGLYCTPCESYWT--ELQLDENGNCPDC-HRPVQEVSEEAYFFRMSKYADRVLAYI 177 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 + HP+FI P+ RRNE+ISF++ GL+DL +SR +FDWGI +P DP++++YVW DALTNYLT Sbjct: 178 KEHPDFIQPVSRRNEMISFIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLT 237 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY+ + + + K+WP D+H++GK+I+RFH I W L++ L LPKKV+ HG+++ G Sbjct: 238 PIGYMHDKE-TFHKYWPCDVHLVGKEIVRFHTIIWGCMLMALGLALPKKVYGHGWLIVDG 296 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKS+GNV+DPI +IEE G DA+RYFL+REI G+DG +D L R+N+DLAN +GN Sbjct: 297 AKMSKSVGNVVDPIALIEEFGADAIRYFLLREITLGQDGNISRDALINRINSDLANDLGN 356 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+ R++SM K G+I T D S+ + + ++ M+ + A+ V + Sbjct: 357 LLHRTLSMAKKYRGGVIVKGTGETAFDASLEEIAAETVKMYTAQMEAMELSPAIRTVWAF 416 Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 ++ ++Y D PW L K + +VLY VE + +IL+ F+P A +I L Sbjct: 417 IARTNKYIDETAPWTLAKDEAKAGQLDSVLYHLVEALHITSILIAPFMPVTARRIHAQLG 476 Query: 479 VADENRCFQSLD----QRLKPGFMLHKTFDPIFPR 509 AD+ Q D R+ G + T + +FPR Sbjct: 477 FADDFDAVQLADIAHWGRVAEGHTV-GTAEQLFPR 510 >gi|259047680|ref|ZP_05738081.1| methionine--tRNA ligase [Granulicatella adiacens ATCC 49175] gi|259035871|gb|EEW37126.1| methionine--tRNA ligase [Granulicatella adiacens ATCC 49175] Length = 670 Score = 448 bits (1153), Expect = e-124, Method: Compositional matrix adjust. Identities = 227/523 (43%), Positives = 334/523 (63%), Gaps = 15/523 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++++ Y++T I YP+ HIGHAY + +D + R+ +L G D F TGTDEHGQKI + Sbjct: 3 EDKKTFYLTTPIYYPSGNLHIGHAYTTVASDAMVRYKKLQGFDTYFLTGTDEHGQKIQEK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ AGV+ FVD+ +D+ LDISYDDFIRTT+ RH + +++K+ D GDIY Sbjct: 63 AKEAGVSEIEFVDKIIFGIQDLWKELDISYDDFIRTTQPRHTKAVQKIFQKLVDNGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + EVY+ A+G + V+ ++EE YFFR+S Y D+ Sbjct: 123 GEYEGWYSVSDEEYFTETQLVEVYRDAEGNMIGGVAPSGHEVELVKEESYFFRMSKYADR 182 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 LL YYE HP+FI P R+NE+I+ F+K GL+DL++SR +FDWGI +P+DP++++YVWIDA Sbjct: 183 LLQYYEEHPDFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIPVPNDPKHVVYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + + ++WPAD+H IGK+I+RFH IYWP L++ +LPLPKK+F+HG Sbjct: 243 LSNYITALGYGSDDETLFNRYWPADVHFIGKEIVRFHTIYWPIMLMALDLPLPKKIFAHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 ++L K K+SKS GNV+DP +IE G+DALRY+L+RE+ G DG + + +R+N DL Sbjct: 303 WLLMKDGKMSKSKGNVVDPNTLIERYGLDALRYYLLREVPFGSDGIFTPESFVERINYDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG IP A S D+ ++ ++ E+ E M+N A Sbjct: 363 ANDLGNLLNRTVAMINKYFDGTIPAYTAPVSSFDQELVDASKAMIVEVEEAMENMQFSVA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 LA + VS ++Y D PW K + A T+ Y+ E +R +A+ LQ F+ + Sbjct: 423 LAAIWKFVSRTNKYIDETTPWAAVKDEARQEELARTMNYLA-ESLRIIAVALQPFLTQTP 481 Query: 471 NKIFDILFVADENRC-FQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +I L + D + SL + G + + PIFPR Sbjct: 482 GEILAQLGITDSALMDYPSLHTFGVIPEGTKVVEKGQPIFPRL 524 >gi|309390254|gb|ADO78134.1| methionyl-tRNA synthetase [Halanaerobium praevalens DSM 2228] Length = 653 Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust. Identities = 217/514 (42%), Positives = 336/514 (65%), Gaps = 9/514 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ Y++T I YP+ + HIGHAY + AD +AR+ ++ G D +F TG+DEHGQKI + AQ Sbjct: 3 KDTYYVTTPIYYPSDKLHIGHAYTTVAADTIARYKKMRGFDTMFLTGSDEHGQKIERKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG K +VDQ F+++ D LDI YD FIRTTE RH + +++K+ D+GDIYKG Sbjct: 63 AAGKEAKEYVDQIVATFKNLWDKLDIEYDYFIRTTEARHEKVVQQIFEKLYDQGDIYKGK 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY EA++ + ++ + + + H V+W+EEE YFF++S Y D+LL + + H Sbjct: 123 YEGWYCTPCEAFWTERQLEEAKEEKVCPDCHREVEWVEEESYFFKMSKYADRLLEHIKDH 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 PEFI P RRNE+I+F+++GL DLS+SR TF+WGI +P D +++YVWIDAL+NYLT G Sbjct: 183 PEFIEPESRRNEMINFIENGLDDLSVSRTTFEWGIPVPIDDDHVIYVWIDALSNYLTAIG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y + + + K+WPADLH++GKDILRFH I WP +++ +L LPK+VF HG++L + K+ Sbjct: 243 YQTDQENFE-KYWPADLHLVGKDILRFHTIIWPIIIMALDLELPKQVFGHGWLLSETGKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP+ +I++ G DA+RY+L+RE+A G DG Y + L +R+N+DLAN +GNL++ Sbjct: 302 SKSKGNVVDPVVLIDDFGKDAIRYYLLREVAFGTDGKYSTESLIQRINSDLANDLGNLLN 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+VSM+ + +D IP + D+ ++ + ++ +E+ M+ AL ++ + V Sbjct: 362 RTVSMVDQYFDSEIPKVAEKADLDQELIDLAAQTKKEVEIEMEKLKYTVALEKIWNFVRR 421 Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVP----KLANKIFDIL 477 ++Y D PW L K DR TVLY +E +R +A++L+ F+ K+ ++ + Sbjct: 422 TNKYIDQTSPWLLAKEPAKRDRLKTVLYNLLESLRIIAVMLKPFLTEAPFKMGQQLGQLE 481 Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 + D + + LK G + K +P+FPR + Sbjct: 482 AIEDADWEAATWGS-LKTGVKV-KNGEPMFPRIV 513 >gi|154684557|ref|YP_001419718.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42] gi|154350408|gb|ABS72487.1| MetS [Bacillus amyloliquefaciens FZB42] Length = 663 Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust. Identities = 221/516 (42%), Positives = 330/516 (63%), Gaps = 12/516 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI + A+ Sbjct: 8 FYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQKAEEEN 67 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + +VD+ + + LDIS+DDFIRTTE RH + +++K+ D GDIY Y G Sbjct: 68 ITPQAYVDRAVAEIQKLWKQLDISHDDFIRTTESRHKEIIEKVFQKLLDNGDIYLDEYEG 127 Query: 127 WYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQDKLLSY 179 WYS+ DE +Y + + V + G+ + +PV+ ++EE YFFR+S Y D+LL + Sbjct: 128 WYSIPDETFYTETQLVDVERNEKGEVVGGKSPDSGHPVELIKEESYFFRMSKYADRLLKF 187 Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 YE +P FI P R+NE+I+ F+K GL+DL++SR TFDWG+K+P +P++++YVWIDAL NY Sbjct: 188 YEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGNPKHVVYVWIDALFNY 247 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 +T GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK+VF+HG++L Sbjct: 248 ITALGYDTENDELYKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAHGWLLM 307 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K K+SKS GNV+DP+ +IE G+D LRY+L+RE+ G DG + +G +R+N DLAN + Sbjct: 308 KDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYDLANDL 367 Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 GNL++R+V+MI K +DG I + G T+ D + SV ++ + M+N AL+ + Sbjct: 368 GNLLNRTVAMIQKYFDGEIGSYEGNVTDFDSELSSVAGETVKAYEKAMENMEFSVALSTL 427 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 L+S ++Y D PW L K +V+Y E +R A+LLQ F+ + K+F Sbjct: 428 WQLISRTNKYIDETAPWVLAKDQEKEKELRSVMYHLAESLRISAVLLQPFLTQTPEKMFA 487 Query: 476 ILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510 L V D++ + + S+ + K +P+FPR Sbjct: 488 QLGVEDQSLKAWDSIQTFGQLKNAKVKKGEPLFPRL 523 >gi|225181535|ref|ZP_03734977.1| methionyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1] gi|225167783|gb|EEG76592.1| methionyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1] Length = 652 Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust. Identities = 224/513 (43%), Positives = 330/513 (64%), Gaps = 9/513 (1%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++ YI+T I YP+ + HIGH+Y + AD +ARF RL G F TGTDEHGQKI + A Sbjct: 2 QKKSFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGHQAYFLTGTDEHGQKIERRA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 Q AG + FVD+ + + VLDISYDDFIRTTE+RH D+ + ++ K ++GDIYK Sbjct: 62 QEAGKEPQEFVDEIVDWIKKLWTVLDISYDDFIRTTEQRHKDSVQKIFTKFYEQGDIYKS 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY EA++ + +V +G PV+ + EE YFF++S Y D+L+ + E+ Sbjct: 122 KYEGWYCTPCEAFWTERQVEEGNCPDC----KRPVELVAEESYFFKMSKYADRLIEHIEN 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +PEFI P R+NE+I+ F+K GL+DL +SR TF WGI +P DP +++YVW+DAL+NY+T Sbjct: 178 NPEFIQPASRKNEMINNFLKPGLEDLCVSRTTFKWGIPVPFDPDHVIYVWLDALSNYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL D FWPAD+ +IGK+I+RFH IYWP FL++ L LPK+VF HG++L + Sbjct: 238 LGYLSEDDSKMKAFWPADVQLIGKEIVRFHTIYWPIFLMALGLELPKQVFGHGWLLLEEG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNVIDP ++E G DA+RYFL+REI G DG + ++ L +R+N DLAN +GNL Sbjct: 298 KMSKSKGNVIDPEVLVERYGSDAIRYFLLREIPFGADGHFSEEALIQRLNFDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R+++M+ K Y G +PTP DE + S+ + Q++ E M L AL+++ + Sbjct: 358 LNRTLAMLNKYYQGKVPTPSLDEAIDEELKSMALDLPQKMTERMDQLLFSNALSELWKFI 417 Query: 422 SEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 + ++Y D PW L K+ N R +TV+Y +E IR +++LL F+P+ +I+ L +A Sbjct: 418 ARANKYIDETAPWTLAKEGNQQRLATVMYNLLESIRIVSVLLLPFMPRTPERIWQQLGIA 477 Query: 481 DENR--CFQSLDQ-RLKPGFMLHKTFDPIFPRF 510 E + + S+ + P K + +FPR Sbjct: 478 HEGKIHTWDSIQEFGALPAGAQTKAAEVLFPRL 510 >gi|310642692|ref|YP_003947450.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Paenibacillus polymyxa SC2] gi|309247642|gb|ADO57209.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) [Paenibacillus polymyxa SC2] Length = 672 Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust. Identities = 227/524 (43%), Positives = 337/524 (64%), Gaps = 15/524 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M YI+T I YP+ + HIGHAY + D +AR+ RL G +V + TGTDEHGQKI + Sbjct: 1 MSSENTFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYEVRYLTGTDEHGQKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A AG T + FVD +D+ LDIS DDFIRTTE+RH + ++ ++ +GDIY Sbjct: 61 KASAAGKTPQRFVDDIVAGIQDLWRKLDISNDDFIRTTEERHKAVVQEIFDRLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQ 173 KG Y GWYS+ DE YY + + V K A+G + +PV+ ++EE YFFR+S Y Sbjct: 121 KGEYEGWYSIPDETYYTETQLVDVVKDAEGNVTGGKSPDSGHPVELVKEESYFFRMSKYA 180 Query: 174 DKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 D+LL +YE +P+FI P R+ E+I+ F+K GL+DL++SR TFDWG+K+ DP++++YVWI Sbjct: 181 DRLLQFYEENPQFIQPESRKKEMINNFIKPGLEDLAVSRTTFDWGVKVKGDPKHVVYVWI 240 Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 DAL+NY+T GY + KFWPA++H++GK+I+RFH IYWP L++ +LPLPKKVF+ Sbjct: 241 DALSNYITALGYGSSNTELYDKFWPANVHIVGKEIVRFHTIYWPIMLMALDLPLPKKVFA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG++L K K+SKS GNV+DP+ +I+ G+D LRY+L+RE+ G DG + + RVN+ Sbjct: 301 HGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDQLRYYLLREVPFGADGTFTPESFVDRVNS 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN +GNL++R+V+M+ K +DG +P A T D +++ + + ++ E M+N Sbjct: 361 DLANDLGNLLNRTVAMVDKYFDGKVPAYEANVTSFDAALVDMATSTYSKVEEAMENMEFS 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469 AL + +S ++Y D +PW L K R+ ++V+ VE +R +ILLQ F+ + Sbjct: 421 VALTAISQFISRSNKYIDETQPWNLAKDEEKRSELASVMVHLVESLRIASILLQPFLTRA 480 Query: 470 ANKIFDILFV-ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 ++I++ L + E + S Q R+ G L K +PIFPR Sbjct: 481 PHQIWEQLGIRQGELTTWDSGKQFGRIPEGTQLVKG-NPIFPRL 523 >gi|212637881|ref|YP_002314401.1| methionyl-tRNA synthetase [Anoxybacillus flavithermus WK1] gi|212559361|gb|ACJ32416.1| Methionyl-tRNA synthetase [Anoxybacillus flavithermus WK1] Length = 656 Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust. Identities = 218/515 (42%), Positives = 330/515 (64%), Gaps = 14/515 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIGHAY + D +AR+ R+ G DV++ TGTDEHGQKI + A+ Sbjct: 10 KKTFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRMRGYDVMYLTGTDEHGQKIQRKAE 69 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT + +VD+ +++ LDISYDDFIRTTE+RH ++ ++ ++GDIY Sbjct: 70 EKGVTPQQYVDEIVAGIKELWKKLDISYDDFIRTTEQRHKQVVEKIFARLLEQGDIYLDE 129 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E++Y + ++ +G PV+ ++E+ YFFR+S Y D+LL++YE + Sbjct: 130 YEGWYCTPCESFYTERQLVEGNCPDC----GRPVEKVKEQSYFFRMSKYVDRLLAFYEEN 185 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI P R+NE+I+ F+K GL+DL++SR TFDWGI +P DP++++YVWIDAL+NY+T Sbjct: 186 PQFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIPVPGDPKHVIYVWIDALSNYITAL 245 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY D +WPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+HG++L K K Sbjct: 246 GYGTENDEKYKTYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDGK 305 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + +G +R+N DLAN +GNL+ Sbjct: 306 MSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINYDLANDLGNLL 365 Query: 363 SRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 +R+V+MI K + G +P G T DE ++ + +++ E M+ +AL V L+ Sbjct: 366 NRTVAMIEKYFAGRVPVYSGTHTSFDEQLVQMAYDTVRQYEEAMEQMQFSQALTAVWQLI 425 Query: 422 SEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S ++Y D +PW L K R ++V+ E +R +A+LLQ F+ ++F L + Sbjct: 426 SRTNKYIDETQPWVLAKDEATREQLASVMSHLAESLRYVAVLLQPFLTATPKRMFAQLGI 485 Query: 480 ADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510 DE S D G H+ P+FPR Sbjct: 486 QDEK--LMSWDSLQTFGASQHERMVEKGAPLFPRL 518 >gi|317126779|ref|YP_004093061.1| methionyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] gi|315471727|gb|ADU28330.1| methionyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] Length = 656 Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust. Identities = 217/513 (42%), Positives = 338/513 (65%), Gaps = 10/513 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+ Y++T I YP+ + HIGHAY + D +AR+ RL G DV+F TGTDEHGQKI + A+ Sbjct: 5 RKTFYLTTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDVMFLTGTDEHGQKIERKAE 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 + GV+ + FVD + + + LDISYDDFIRTTE+RH + ++ ++ +GDIY Sbjct: 65 DKGVSPQQFVDDIVKTIKSLWSKLDISYDDFIRTTEERHKKVVQKIFDQLLQQGDIYLDQ 124 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ D Y+ DG+ + PV+ ++EE YFFR+S Y D+LL YYE + Sbjct: 125 YEGLYCTPCESFFTD---YQAKDGKCPDCSR-PVEKVQEESYFFRMSKYADRLLKYYEEN 180 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI P R+NE+I+ F+K GL+DL++SR +FDWGI + +P++++YVWIDAL+NY+T Sbjct: 181 PDFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGINVKSNPEHVVYVWIDALSNYITAL 240 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY + + K+WPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF HG++L K K Sbjct: 241 GYGSDDETLYKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFGHGWLLMKDGK 300 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ +IE G+DALRY+L+RE+ G DG + +G RVN DLAN +GNL+ Sbjct: 301 MSKSKGNVVDPVPLIERYGLDALRYYLLREVPFGSDGTFTPEGFVDRVNYDLANDLGNLL 360 Query: 363 SRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 +R+V+MI K +DG +P T DES++ + ++++ + M++ AL + LV Sbjct: 361 NRTVAMINKYFDGEMPKYIKNATSYDESLVDHVNATVKKVEDAMEDMEFSVALTAIWQLV 420 Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S ++Y D +PW + + T ++ +V+Y E +R ++IL+Q F+ + KI++ L + Sbjct: 421 SRTNKYIDETQPWIIARDETAKEQLGSVMYHLAESLRYISILIQPFLTEAPKKIWEQLGI 480 Query: 480 ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 ++ + +L + + G + +P+FPR Sbjct: 481 TEDQTVWSTLQDFGKTESGTKVVTKGEPLFPRL 513 >gi|330814121|ref|YP_004358360.1| methionyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063] gi|327487216|gb|AEA81621.1| methionyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063] Length = 481 Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust. Identities = 218/487 (44%), Positives = 314/487 (64%), Gaps = 15/487 (3%) Query: 22 IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81 +GHAY I AD +AR+ RL+G DV F TGTDEHGQKI K+A ++ VF ++ S+ F Sbjct: 1 MGHAYSSISADFIARYKRLEGYDVKFVTGTDEHGQKIQKSADKRKLSPNVFCNEISKVFL 60 Query: 82 DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 D+ L++S DFIRTTE RHH T + LWK + +K IY YSGWYS+ DEA+Y + E+ Sbjct: 61 DLTKTLNLSNTDFIRTTEDRHHKTVQKLWKILEEKKFIYLSKYSGWYSVSDEAFYTESEI 120 Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201 + + + A + V+W+EEE YFF+LS +Q+ L+ +YE +PEFI P RRNEV+SFVK Sbjct: 121 IEKDNIKLSVASGSAVEWVEEESYFFKLSQFQNLLIKHYEDNPEFIQPSSRRNEVMSFVK 180 Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 GL DLS+SR +F WGI +P+ +I+YVW+DALTNYLT T Y D WPAD+H Sbjct: 181 GGLNDLSISRNSFKWGISVPNSKDHIIYVWLDALTNYLTATNYFDENSS-----WPADVH 235 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321 +IGKDILRFHA+YWPAFLL+A +PLPK +F HG+IL EK+SKS GN++DPIEV+ E G Sbjct: 236 IIGKDILRFHAVYWPAFLLAAEIPLPKTIFGHGWILSGDEKMSKSKGNILDPIEVVNEFG 295 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 +D +RY+L++E+ G DG + D LK +N+DLAN IGNL R +I K + +P P Sbjct: 296 LDEIRYYLMKEVMYGLDGNINIDNLKNCINSDLANNIGNLSQRIFVLINKYFSCKVPDPK 355 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 + D+ + C ++ +R++M + IH + +VIS S+++++ + ++PW K + Sbjct: 356 PLLKDDQKFMD-CP--VEGLRKSMDSFEIHNYIREVISYSSKINKFVNDEEPWTKAKNSD 412 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK------- 494 R T+LY+ + ++ + ILL +P + L V +N + +++ L Sbjct: 413 PRVGTILYIALNALKNIFILLHPVMPSKSEYYLSCLNVDTKNISLELINKNLPINVELKM 472 Query: 495 PGFMLHK 501 PG M K Sbjct: 473 PGLMFKK 479 >gi|226309673|ref|YP_002769567.1| methionyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] gi|226092621|dbj|BAH41063.1| methionyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] Length = 675 Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust. Identities = 219/475 (46%), Positives = 317/475 (66%), Gaps = 4/475 (0%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I YP+ + HIG+AY I D LAR+ RL G DV + TGTDEHGQK+ + A G Sbjct: 6 YITTPIYYPSNKLHIGNAYTTIACDALARYKRLRGYDVYYLTGTDEHGQKLQERAAEEGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 F+D +D+ + LDISYDDFIRTTE RH + + +++++ D+GDIY G Y G+ Sbjct: 66 QPLEFIDPIVDWVKDLWEKLDISYDDFIRTTEPRHKEVVQKVFQRLLDQGDIYLGEYEGF 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + DEA++ + + K +G V+ ++E+ YFFR+S YQD+LL++ E++PEFI Sbjct: 126 YCVPDEAFWTETQC-KTDNGYICPDCGREVKKVKEKNYFFRMSKYQDRLLAHIEANPEFI 184 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P RRNE+++ F+K GL+DLS+SR TFDWGIK+P DP++++YVWIDALTNY++ GYL Sbjct: 185 QPESRRNEMVNNFLKPGLQDLSVSRSTFDWGIKVPTDPEHVIYVWIDALTNYISALGYLS 244 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D FWPA++H++GKDILRFH IYWP L++ ++PLPK++F HG++L K+SKS Sbjct: 245 EDDSKYRNFWPANVHMVGKDILRFHTIYWPILLMALDIPLPKQIFGHGWLLMPDGKMSKS 304 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNVIDP +I+ G D +RYFL+REI G+DG + + +R+N DLAN IGNL+SR+ Sbjct: 305 KGNVIDPKVLIDRYGSDGVRYFLLREINFGQDGIFTPESFVQRLNYDLANDIGNLLSRTA 364 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +MI K +DG++P P E D+S++ + + + E+M+ ALA + LV ++ Sbjct: 365 TMIEKYFDGIVPAPQDAGEPDDSLIGLAMKTKALVEEHMEEMRFSNALAHIWELVGRTNK 424 Query: 427 YFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 Y D PW L K+ R +TV+Y VE IR ++L+Q F+ K KI+D L + Sbjct: 425 YIDETMPWNLAKSEETKGRLATVMYNLVESIRISSVLIQPFMTKAPAKIWDQLGI 479 >gi|205372010|ref|ZP_03224828.1| methionine-tRNA ligase/methionyl-tRNA synthetase [Bacillus coahuilensis m4-4] Length = 652 Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust. Identities = 222/518 (42%), Positives = 339/518 (65%), Gaps = 12/518 (2%) Query: 1 MKER-EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M+E+ YI+T I YP+ HIGHAY + D +AR+ RL G DV++ TGTDEHGQKI Sbjct: 1 MQEKLNTFYITTPIYYPSGNLHIGHAYTTVAGDAMARYKRLRGFDVMYLTGTDEHGQKIQ 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 + A+ VT +VD+ + +D+ + LDISYDD+IRTTE RH ++ ++ ++GDI Sbjct: 61 RKAEEQNVTPIEYVDEIVKGVKDLWEKLDISYDDYIRTTESRHKQVVEKIFAQLVEQGDI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 Y Y GWY E+++ + ++ DG+ + V+ ++EE YFF++S Y D+LL Y Sbjct: 121 YLDQYEGWYCTPCESFFTERQL---VDGKCPDCGRE-VEKVKEESYFFKVSKYADRLLQY 176 Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 YE +P FI P R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDAL+NY Sbjct: 177 YEENPGFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDALSNY 236 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 ++ GY D +WPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+HG++L Sbjct: 237 ISALGYGSEDDHKYVNYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLM 296 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K K+SKS GNV+DP+ +I+ G+D+LRY+L+RE+ G DG + +G +R+N DLAN + Sbjct: 297 KDGKMSKSKGNVVDPVTLIDRYGLDSLRYYLLREVPFGADGVFTPEGFVERINFDLANDL 356 Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 GNL++R+V+M+ K +DG IP+ + E ++ V ++ E M+N AL +V Sbjct: 357 GNLLNRTVAMMNKYFDGEIPSYSESKNEFSTQLVKVNHETVKGYEEAMENMEFSVALTKV 416 Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 L+S ++Y D PW L K + S V+Y E +R+ A+LL+ F+ K KIF+ Sbjct: 417 WQLISRTNKYIDETSPWALAKEEERKEELSEVMYHLAESLRRAAVLLKPFLTKTPGKIFE 476 Query: 476 ILFVADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 L V DE+ + ++S+++ + G + K +PIFPR Sbjct: 477 QLGVTDESLQSWESIERFDSIPSGTKVVKKGEPIFPRL 514 >gi|189425008|ref|YP_001952185.1| methionyl-tRNA synthetase [Geobacter lovleyi SZ] gi|189421267|gb|ACD95665.1| methionyl-tRNA synthetase [Geobacter lovleyi SZ] Length = 508 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 219/508 (43%), Positives = 329/508 (64%), Gaps = 8/508 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + Y++T I Y N PHIGHAY + ADVLAR+ R+ G DV F TG+DEHGQK+ KAAQ Sbjct: 2 KPSFYVTTPIYYVNDVPHIGHAYTTVAADVLARYKRMKGFDVFFLTGSDEHGQKVEKAAQ 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T D+ + F+ + + L IS++DFIRTT++RH ++K++ ++GDIY G Sbjct: 62 TNGETPLELADRVVKRFQALWEKLGISHNDFIRTTQERHKQGVTHIFKQLMEQGDIYLGE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y WY E ++ + +V DG+ + + PV+ ++EE YFF++SAY +KLL++ E++ Sbjct: 122 YEDWYCTPCETFWTETQV---EDGKCPDC-NRPVEKLKEESYFFKMSAYGEKLLAHIEAN 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNE+ISFVK GL+DLS+SR +F WGI +P + ++++YVW DALTNY++ G Sbjct: 178 PDFIQPKTRRNEIISFVKEGLRDLSVSRTSFSWGIPVPGNERHVIYVWFDALTNYISALG 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y N DG+ ++WPAD H+IGKDILRFH +YWP FL++A LP+P+KVF+HG+ +G+K+ Sbjct: 238 Y-PNADGNYGRYWPADAHLIGKDILRFHTVYWPTFLMAAGLPIPQKVFAHGWWTVEGQKM 296 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSL NV++P +I++ GVD +RYFL+RE+ G DG + L R+N+DLAN +GNL+S Sbjct: 297 SKSLQNVVEPNMLIDKYGVDVVRYFLLREVPFGLDGDFSHGSLINRINSDLANDLGNLLS 356 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS +M++K +DG++P PG +E D ++ + +L + M +AL + ++S Sbjct: 357 RSTAMLVKYFDGILPAPGPLSELDATLKTKAEAMLAAVDNCMDELAFSKALQSIWDVISA 416 Query: 424 VDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++Y D PW L K R +TV+Y +E R + L+ F+P+ A K L Sbjct: 417 GNKYIDETAPWGLAKDPAKREQLATVMYCLLEAQRLVHSLVAPFMPQTARKALACLGWQK 476 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 E + +L PG ++ K +FPR Sbjct: 477 EATEEDLVWGKLAPGTIIEKA-AALFPR 503 >gi|308069627|ref|YP_003871232.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) [Paenibacillus polymyxa E681] gi|305858906|gb|ADM70694.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) [Paenibacillus polymyxa E681] Length = 672 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 229/524 (43%), Positives = 336/524 (64%), Gaps = 15/524 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M YI+T I YP+ + HIGHAY + D +AR+ RL G +V + TGTDEHGQKI + Sbjct: 1 MSNENTFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYEVRYLTGTDEHGQKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A AG T + FVD +++ LDIS DDFIRTTE+RH + ++ ++ +GDIY Sbjct: 61 KASAAGKTPQRFVDDIVAGIQELWRKLDISNDDFIRTTEERHKAVVQEIFDRLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQ 173 KG Y GWYS+ DE YY + + V K A+G + +PV+ ++EE YFFR+S Y Sbjct: 121 KGEYEGWYSIPDETYYTETQLVDVVKDAEGNVAGGKSPDSGHPVELVKEECYFFRMSKYA 180 Query: 174 DKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 D+LL +YE +P+FI P R+ E+I+ F+K GL+DL++SR TFDWGIK+ DP++++YVWI Sbjct: 181 DRLLQFYEENPQFIQPESRKKEMINNFIKPGLEDLAVSRTTFDWGIKVKGDPKHVVYVWI 240 Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 DAL+NY+T GY + KFWPA++H++GK+I+RFH IYWP L++ +LPLPKKVF+ Sbjct: 241 DALSNYITALGYGSSNTELYDKFWPANVHIVGKEIVRFHTIYWPIMLMALDLPLPKKVFA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG++L K K+SKS GNV+DP+ +I+ G+D LRY+L+RE+ G DG + + RVN+ Sbjct: 301 HGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDQLRYYLLREVPFGADGTFTPESFVDRVNS 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN +GNL++R+V+M+ K +DG +P A T D ++ + + ++ E M+N Sbjct: 361 DLANDLGNLLNRTVAMVDKYFDGKVPAYEANVTAFDGALEDMATSTYSKVEEAMENMEFS 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469 AL + +S ++Y D +PW L K R S+V+ VE +R +ILLQ F+ + Sbjct: 421 VALTAISQFISRSNKYIDETQPWNLAKDEAKRRELSSVMLHLVESLRIASILLQPFLTRA 480 Query: 470 ANKIFDILFVAD-ENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +KI++ L ++ E + S Q R+ G L K +PIFPR Sbjct: 481 PHKIWEQLGISQGELTTWDSGKQFGRIPEGTQLVKG-NPIFPRL 523 >gi|89892874|ref|YP_516361.1| hypothetical protein DSY0128 [Desulfitobacterium hafniense Y51] gi|89332322|dbj|BAE81917.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 647 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 226/512 (44%), Positives = 330/512 (64%), Gaps = 14/512 (2%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I YPNA PHIG AY + AD AR+HRL G DV F TGTDE+ QKI + A++ Sbjct: 2 KYYITTPIFYPNASPHIGTAYTTVAADAFARYHRLKGHDVYFLTGTDENAQKIVRTAESQ 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ +VD F+ + + LDISYDDFIRTTE+RHH+ + ++ K+ ++GDIYK Y Sbjct: 62 GMEPLAYVDGVVERFKALWEELDISYDDFIRTTEERHHEVVKKIFTKLYEQGDIYKSEYE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY E ++ ++++ DG+ N V+ ++EE YFF+LS YQD LL + + HP Sbjct: 122 GWYCTPCETFWTENKLI---DGKCPNPDCGRDVELLKEESYFFKLSKYQDALLRHIKDHP 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RRNE+I F++ GL+DL +SR TF WGI++P +P++++YVW+DAL NY++ GY Sbjct: 179 DFIQPASRRNEMIKFIEGGLEDLCVSRTTFQWGIQVPFNPKHVVYVWLDALINYISALGY 238 Query: 245 LDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302 PDG ++WPA++H++GKDI+RFHA+ WP L++ ++PLPK V+ HG+ L K G K Sbjct: 239 ---PDGELYQRYWPAEVHLMGKDIVRFHAVIWPIILMALDVPLPKVVYGHGWYLSKEGGK 295 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 ISKS GNV D ++I G DA+RYFL+RE+ G DG Y +D L +R+N+DLAN +GN V Sbjct: 296 ISKSRGNVQDSFKLIRRYGSDAIRYFLLREMQVGTDGAYSEDSLVERLNSDLANDLGNFV 355 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SRS++MI+K G+IP G TE + + ++ V+ ++ E ++ AL + LVS Sbjct: 356 SRSLAMIVKYRGGVIPKAGEPTELEAELRALGQEVVAKVEERLEAHDPAGALENLWRLVS 415 Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +++Y D PW L K +R TVL+ E IR L IL F+PKL K+F ++ Sbjct: 416 RMNKYVDETAPWTLAKQEGQQERLDTVLHTFAEAIRVLGILCAPFMPKLTGKMFRQCGIS 475 Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 DE +++ + L G + + + +FPR Sbjct: 476 DELLAWEAAKEWDVLGEGIQVQRG-EALFPRI 506 >gi|260893945|ref|YP_003240042.1| methionyl-tRNA synthetase [Ammonifex degensii KC4] gi|260866086|gb|ACX53192.1| methionyl-tRNA synthetase [Ammonifex degensii KC4] Length = 512 Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust. Identities = 227/513 (44%), Positives = 334/513 (65%), Gaps = 12/513 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K YI+T I YP+ + HIGHAY + AD +ARF R++G DV F TG DEHGQKI + A+ Sbjct: 2 RGKFYITTPIYYPSDRLHIGHAYTTVAADTVARFKRMEGYDVFFLTGADEHGQKIERTAK 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 + G + +VD+ +F+++ L+ISYDDFIRTTE RH + +++K+ ++GDIYK Sbjct: 62 SKGKDPQSYVDEIVASFKELWARLEISYDDFIRTTEPRHKVVAQKIFQKLYEQGDIYKST 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E ++ ++ DG+ + PV+ ++EE YFFRLSAY D+LL+Y E H Sbjct: 122 YQGWYCTPCETFWTARQL---VDGKCPDCG-RPVELLQEESYFFRLSAYADRLLAYIEEH 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNEVISF++ GL+DL +SR TF WGI +P DP++++YVWIDALTNYL+ G Sbjct: 178 PDFIQPPARRNEVISFIRGGLEDLCVSRTTFSWGIPVPFDPRHVIYVWIDALTNYLSALG 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D ++WPAD+H++GKDI+RFHAI WP+ L++ L LP++V HG++L +G K+ Sbjct: 238 YGTEDDERFKRYWPADVHLVGKDIVRFHAIIWPSILMALGLELPRRVVGHGWLLVEGGKM 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNVIDP +I++ GVDA+RY+L+RE+A G DG Y++ L KR+N DLAN +GNL+ Sbjct: 298 SKSKGNVIDPHYLIDKYGVDAVRYYLLRELAFGADGEYEEKNLVKRLNYDLANDLGNLLY 357 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+++++ K +G+I P D+ ++++ + E + + ALA + LV Sbjct: 358 RTLTVLEKYGEGVIGEPVEKEGPDDELIALAISTPARVAELVDQLQLSEALAAIWQLVGR 417 Query: 424 VDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++Y D PW L K +P R TV+Y +EV R + +LL F+P +++ L +A Sbjct: 418 ANKYLDETAPWRLGK-DPGRKKRFDTVIYNVLEVYRFITVLLGPFMPGFPPRVWPQLGIA 476 Query: 481 D--ENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 F+SL +L PG + K +P+FPR Sbjct: 477 SLPALHTFESLKWGQLPPGIRVAKG-EPLFPRL 508 >gi|320529744|ref|ZP_08030822.1| methionyl-tRNA synthetase [Selenomonas artemidis F0399] gi|320137983|gb|EFW29887.1| methionyl-tRNA synthetase [Selenomonas artemidis F0399] Length = 514 Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust. Identities = 220/492 (44%), Positives = 320/492 (65%), Gaps = 6/492 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+A+ HIGHAY +AD +ARF RL G DV F TG+DEHGQKI + Sbjct: 1 MSEKTPFYITTPIYYPSAKLHIGHAYCTTVADTIARFKRLAGYDVFFLTGSDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ GVT + +VD+ F+++ +L ISYDDFIRT+E+RHH+ + ++++I D+GDIY Sbjct: 61 AAEKEGVTPQAYVDRIVAGFQELWQLLGISYDDFIRTSEERHHELVQNIFQQIYDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y E+Y+ E+ +G + H PVQ + EE YFFR+S Y D++L+Y Sbjct: 121 KGEYKGLYCTPCESYWT--ELQLDENGNCPDC-HRPVQEVSEEAYFFRMSKYADRVLAYI 177 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 + HP+FI P+ RRNE+ISF++ GL+DL +SR +FDWGI +P DP++++YVW DALTNYLT Sbjct: 178 KEHPDFIQPVSRRNEMISFIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLT 237 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY+ + + + K+WP D+H++GK+I+RFH I W L++ L LPKKV+ HG+++ G Sbjct: 238 PIGYMHDKETFR-KYWPCDVHLVGKEIVRFHTIIWGCMLMALGLALPKKVYGHGWLIVDG 296 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKS+GNV+DPI +IEE G DA+RYFL+REI G+DG +D L R+N+DLAN +GN Sbjct: 297 AKMSKSVGNVVDPIALIEEFGADAIRYFLLREITLGQDGNISRDALINRINSDLANDLGN 356 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+ R++SM K G+I T D S+ + + ++ M+ + A+ V + Sbjct: 357 LLHRTLSMAKKYRAGVIVKGTGETAFDASLEEMAAETVKMYTAQMEAMELSPAIRTVWAF 416 Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 ++ ++Y D PW L K + VLY VE + +IL+ F+P A +I L Sbjct: 417 IARTNKYIDETAPWTLAKDEAKAGQLDYVLYHLVEALHITSILIAPFMPVTARRIHAQLG 476 Query: 479 VADENRCFQSLD 490 AD+ Q D Sbjct: 477 FADDFDAVQLAD 488 >gi|325294665|ref|YP_004281179.1| methionyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065113|gb|ADY73120.1| Methionyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 525 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 230/510 (45%), Positives = 323/510 (63%), Gaps = 10/510 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 EK Y++T I Y N PH+GHAY AD++ARF+R G DV F TGTDEHGQKI +AA+ Sbjct: 2 EKFYVTTPIYYVNDIPHLGHAYTTTAADIVARFNRFLGRDVFFLTGTDEHGQKIQQAAEK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T K FVD F+++ + L+ISYD FIRTT+ H + ++KK + GDIY G Y Sbjct: 62 RGMTPKEFVDTLVPKFKELWEKLNISYDHFIRTTDPEHIKAVQYIFKKCYENGDIYLGEY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY + E Y+ + E+ +G+Y V ++EE YFFRLS YQD+LL +YE +P Sbjct: 122 EGWYCIPCETYHTEKEL---LEGKYCPMCKREVVRVKEESYFFRLSKYQDRLLEFYEENP 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RRNEVI+FVK GLKDLS+SR +F WGI +P + ++++YVW DALTNYLT GY Sbjct: 179 DFIAPEFRRNEVINFVKQGLKDLSISRTSFTWGIPVPINEKHVIYVWFDALTNYLTAVGY 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 DN D +WPADLH++GKDILRFH +YWPAFL+SA L +PK+VF+HG+ GEK+S Sbjct: 239 PDNMDKVN-HYWPADLHLVGKDILRFHTVYWPAFLMSAGLEIPKRVFAHGWWTVNGEKMS 297 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV +P E+IE+ GVD +R+FL RE++ G DG + + L R+N +LAN +GNL +R Sbjct: 298 KSKGNVANPFEIIEKFGVDQVRFFLFREVSFGLDGDFTYEKLVGRINGELANDLGNLFNR 357 Query: 365 SVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 ++SM+ K ++P P GA E D + + ++E + + RAL ++ VS Sbjct: 358 TLSMLKKYRKSIVPEPKGAEDELDVELKNKAIATAARLKELIPKAELTRALEEIWQFVSF 417 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V+ Y D + PW L K + VLY VE +R + + ++P A K+ ++L + + Sbjct: 418 VNFYIDRRAPWSLNKEGKEELDRVLYNMVEALRFITAFVYPYMPSSAEKMAEMLKLGKKA 477 Query: 484 RCFQSLDQR----LKPGFMLHKTFDPIFPR 509 + + +KPG L K +FPR Sbjct: 478 ESLRISEFEDWGGIKPGTELEKG-GILFPR 506 >gi|219666137|ref|YP_002456572.1| methionyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] gi|219536397|gb|ACL18136.1| methionyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] Length = 647 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 226/512 (44%), Positives = 329/512 (64%), Gaps = 14/512 (2%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I YPNA PHIG AY + AD AR+HRL G DV F TGTDE+ QKI + A++ Sbjct: 2 KYYITTPIFYPNASPHIGTAYTTVAADAFARYHRLKGHDVYFLTGTDENAQKIVRTAESQ 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ +VD F+ + + LDISYDDFIRTTE+RHH+ + ++ K+ ++GDIYK Y Sbjct: 62 GMEPLAYVDGVVERFKALWEELDISYDDFIRTTEERHHEVVKKIFTKLYEQGDIYKSEYE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY E ++ ++++ DG+ N V+ ++EE YFF+LS YQD LL + + HP Sbjct: 122 GWYCTPCETFWTENKLM---DGKCPNPDCGRDVELLKEESYFFKLSKYQDALLRHIKDHP 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RRNE+I F++ GL+DL +SR TF WGI++P +P++++YVW+DAL NY++ GY Sbjct: 179 DFIQPASRRNEMIKFIEGGLEDLCVSRTTFQWGIQVPFNPKHVVYVWLDALINYISALGY 238 Query: 245 LDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302 PDG ++WPA++H++GKDI+RFHA+ WP L++ ++PLPK V+ HG+ L K G K Sbjct: 239 ---PDGELYQRYWPAEVHLMGKDIVRFHAVIWPIILMALDVPLPKVVYGHGWYLSKEGGK 295 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 ISKS GNV D E+I G DA+RYFL+RE+ G DG Y +D L +R+N+DLAN +GN V Sbjct: 296 ISKSRGNVQDSFELIRRYGSDAIRYFLLREMQVGTDGAYSEDSLVERLNSDLANDLGNFV 355 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SRS++MI+K G+IP TE + + ++ V+ ++ E ++ AL + LVS Sbjct: 356 SRSLAMIVKYRGGVIPKAAEPTELEAELRALGQEVVAKVEERLEAHDPAGALENLWRLVS 415 Query: 423 EVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +++Y D PW L K +A TVL+ E IR L IL F+PKL K+F ++ Sbjct: 416 RMNKYVDETAPWTLAKQEGQQARLDTVLHTFAEAIRILGILCAPFMPKLTGKMFRQCGIS 475 Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 DE +++ + L G + + + +FPR Sbjct: 476 DELLAWEAAKEWAVLGEGIQVQRG-EALFPRI 506 >gi|148265184|ref|YP_001231890.1| methionyl-tRNA synthetase [Geobacter uraniireducens Rf4] gi|146398684|gb|ABQ27317.1| methionyl-tRNA synthetase [Geobacter uraniireducens Rf4] Length = 509 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 227/510 (44%), Positives = 325/510 (63%), Gaps = 18/510 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y N PHIGHAY + ADVLAR+ RL G +V F TGTDEHGQK+ KAA AG Sbjct: 5 FYVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLKGFEVFFLTGTDEHGQKVEKAANAAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + D+ + F+ + + LDISY DFIRTT++RH L+ K+ KGDIY G Y Sbjct: 65 ETPQELADRVMKRFQALWEKLDISYTDFIRTTQERHKKGVADLFTKVMGKGDIYLGEYED 124 Query: 127 WYSLRDEAYYNDDEV--YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 WY E ++ + ++ YK D + P + ++EE YFFR+S YQ++LL++ E++P Sbjct: 125 WYCTPCETFWTETQLIDYKCPDC------NRPTEKLKEESYFFRMSKYQEQLLAHIEANP 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RRNE+ISFV+ GL+DLS+SR TF WGI +P + ++++YVW DALTNY+T GY Sbjct: 179 DFIQPKSRRNEIISFVREGLRDLSVSRTTFTWGIPVPGNDKHVIYVWFDALTNYITALGY 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D G+ +KFWP D H+IGKDILRFHA+YWP FL++A LP+PKKVF+HG+ +G+K+S Sbjct: 239 PDE-SGNFSKFWPVDAHLIGKDILRFHAVYWPTFLMAAGLPVPKKVFAHGWWTVEGQKMS 297 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSL NV++P +I++ GVDA+RYFL+RE+ G DG + L R+N+DLAN +GNL++R Sbjct: 298 KSLQNVVEPNMLIDKYGVDAIRYFLLREVPFGLDGDFSHTALVHRINSDLANDLGNLLNR 357 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 S +M+ K + G++ PG F E D +++++ ++ +AL + +VS Sbjct: 358 STAMVNKYFGGVVQAPGVFNEIDSIYREKTEEMVRQVDAHLDELAFSKALQSIWEVVSAG 417 Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF---V 479 ++Y D PW L K DR +TV+Y +E R + ++ AF+P+ K L Sbjct: 418 NKYIDETAPWTLAKDEAQKDRLATVMYCLLESQRIVYFIISAFMPQTTVKGLGYLGWNEA 477 Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 DEN LKPG + K + +FPR Sbjct: 478 PDENGLRWG---GLKPGTQVIKA-EALFPR 503 >gi|257439196|ref|ZP_05614951.1| methionine--tRNA ligase [Faecalibacterium prausnitzii A2-165] gi|257198329|gb|EEU96613.1| methionine--tRNA ligase [Faecalibacterium prausnitzii A2-165] Length = 666 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 216/516 (41%), Positives = 323/516 (62%), Gaps = 15/516 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E YI+T I YP+ + HIGH+Y + D LARF R+ G +V+F TGTDEHGQKI Sbjct: 1 MSEHNTFYITTPIYYPSDKLHIGHSYTTVACDALARFKRMQGKEVMFLTGTDEHGQKIQD 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A +AGVT K +VD+ +D+ +LD+SYD FIRTT+ H +TC+ ++ ++ ++GDIY Sbjct: 61 KAADAGVTPKEYVDRIVATVKDLWKLLDVSYDRFIRTTDDYHVETCQKIFTQLYEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 KG Y G Y E+++ D ++ G + Y+A EE YFF+ Y D+L Sbjct: 121 KGEYIGHYCKPCESFWTDSQLVDGKCPDCGREVYDAH--------EEAYFFKTGKYADRL 172 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 L YYE +P+FI P R+NE+I+F+K GL+D +SR + WGI +P DP++ MYVW+DAL+ Sbjct: 173 LKYYEENPQFIQPESRKNEMIAFIKQGLQDTCVSRTSVKWGIPVPFDPKHTMYVWVDALS 232 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NY++ GY + KFWPADLH++GK+ILRFH I WPA L++ +LPLPK+VF HG++ Sbjct: 233 NYISALGYGNETYHDYNKFWPADLHMVGKEILRFHTILWPAMLMALDLPLPKRVFGHGWL 292 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L G K+SKS+GNV+DP+ + + GVD++RYFL+REI G DG + + L R+N+DLAN Sbjct: 293 LMNGGKMSKSVGNVVDPVVLCDRYGVDSIRYFLLREIPFGNDGMFTNEALINRINSDLAN 352 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNL+SR+V+M K + G + D + ++ + +L ++ +M N I +AL + Sbjct: 353 DLGNLLSRTVAMCEKYFGGTVHKAAGTEAIDTELETMVNELLGKVTADMDNLTIPQALME 412 Query: 417 VISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + +++ ++Y D PW L K N R +VLY E +R ILL A++P A K+ Sbjct: 413 IFAVIQRANKYIDETAPWALAKDEANKARLESVLYHLCEALRVAGILLNAYLPSTAPKMM 472 Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 D L ++ + ++ + +HK D +FPR Sbjct: 473 DQLGLSTADIDLSKAAYGVQETYTVHKG-DALFPRI 507 >gi|296131644|ref|YP_003638891.1| methionyl-tRNA synthetase [Thermincola sp. JR] gi|296030222|gb|ADG80990.1| methionyl-tRNA synthetase [Thermincola potens JR] Length = 647 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 215/512 (41%), Positives = 330/512 (64%), Gaps = 9/512 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ HIGHAY + AD +AR+ R+ G DV F TG+DEHGQKI + A+ Sbjct: 2 KKTFYITTPIYYPSDNLHIGHAYTTVAADTIARYKRMTGYDVRFLTGSDEHGQKIERTAK 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV +VD+ F+++ LD+ YDDFIRTTE RH + + ++ ++ ++GDIYK Sbjct: 62 ARGVEPIDYVDRIVAGFKNLWRHLDVHYDDFIRTTEPRHKEVVQKIFTRLYEQGDIYKSE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E ++ + + +G PV+ + EE YFFR+S Y D+LL Y E + Sbjct: 122 YEGLYCTPCETFWTERQAEEGNCPDC----GRPVERVREESYFFRMSKYADRLLRYIEEN 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P+ RRNE+++F+K GL+DL +SR TFDWGIK+P DP++++YVW+DALTNY++ G Sbjct: 178 PDFIQPVSRRNEMVNFIKQGLEDLCVSRTTFDWGIKVPFDPKHVVYVWVDALTNYISALG 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D K+WPAD+H++GKDI+RFH I WP L++ PLPKKV HG++L +G K+ Sbjct: 238 YGTENDELYKKYWPADVHLVGKDIVRFHTIIWPILLMAIGEPLPKKVMGHGWLLLEGGKM 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNVIDP+ +I++ GVDA+RY+L+RE+ G DG+Y ++ L +R+N+DLAN +GNL+S Sbjct: 298 SKSKGNVIDPLVLIDKYGVDAIRYYLLRELPFGSDGYYAEEALIQRINSDLANDLGNLIS 357 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+++M+ K ++GM+ P E DE + + +++ R M+ + ALA + L+ Sbjct: 358 RTIAMVEKYFNGMVQAPTEKEEIDEDLRQLAMVTVEDYRNQMEKLELSNALASIWKLIGR 417 Query: 424 VDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++Y D PW L K R TVLY +EVIR + +L+ F+ +L +K++ ++ Sbjct: 418 ANKYIDETAPWILAKDEAKRPRLGTVLYNLLEVIRIVTVLVSPFMTRLPDKVWVQCGLSG 477 Query: 482 ENRC--FQSLDQRLK-PGFMLHKTFDPIFPRF 510 + C ++S+ + P + K + +FPR Sbjct: 478 KEECTTWESVQNWGRFPADINVKRGEALFPRI 509 >gi|297616267|ref|YP_003701426.1| methionyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297144104|gb|ADI00861.1| methionyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 646 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 212/475 (44%), Positives = 315/475 (66%), Gaps = 7/475 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + + YI+T I YP+ HIGHAY + AD +AR+ R+ G DV F TG+DEHGQKI + Sbjct: 1 MGDGKSFYITTPIYYPSDNLHIGHAYTTVAADCIARYKRMQGYDVFFLTGSDEHGQKIER 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A++ G+ K +VD+ F+ + D L IS++DFIRTTE+RH + +++K+ +KGDIY Sbjct: 61 TARDKGMEPKAYVDRIVDGFKVLWDTLLISHNDFIRTTEERHEKAVQTIFQKVYEKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y GWY EA++ + ++ DG+ + PV+ +EE YFF +S Y ++LL + Sbjct: 121 KAKYEGWYCTPCEAFWTERQL---VDGKCPDCDR-PVELTQEESYFFAMSKYAERLLKHI 176 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E +P+FI P RRNE+I+F+KSGL+DL +SR TF+WGI IP P +++YVW DAL NYLT Sbjct: 177 EENPDFIQPESRRNEMINFIKSGLEDLCVSRTTFEWGIPIPFAPGHVIYVWFDALVNYLT 236 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY D+ + K+WPAD+H++GKDI+RFH + WP L++A+LPLPK+VF HG+++ +G Sbjct: 237 AVGYPDDQE-KFGKYWPADVHLVGKDIVRFHTVIWPTILMAADLPLPKQVFGHGWLMLEG 295 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKS GNV+DP+ ++E+ GVD++RY+L++E+ G DG+Y ++ L R+N+DLAN +GN Sbjct: 296 GKMSKSKGNVVDPLILVEKYGVDSIRYYLLKELNYGMDGYYSEEMLIARINSDLANDLGN 355 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 LVSR++ MI + G+IP PG D+ ++ + V E+ + AL V L Sbjct: 356 LVSRTIGMIERYCQGVIPVPGPQEGLDQELVDTAAAVYGEVGRQLDRLDFSSALGAVWRL 415 Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +S ++Y D PW L + +R +TVLY EVIR I+L F+P L +I Sbjct: 416 ISRANKYIDESAPWLLARDEAKRERLNTVLYNLAEVIRITGIMLAPFMPTLPGRI 470 >gi|322420739|ref|YP_004199962.1| methionyl-tRNA synthetase [Geobacter sp. M18] gi|320127126|gb|ADW14686.1| methionyl-tRNA synthetase [Geobacter sp. M18] Length = 509 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 223/510 (43%), Positives = 327/510 (64%), Gaps = 12/510 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + Y++T I Y N PHIGHAY + ADVLAR+ RL G DV F TGTDEHGQK+ KAA Sbjct: 2 KPAFYVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLMGFDVFFLTGTDEHGQKVEKAAN 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T D+ + F+ + + L+IS+ DFIRTT++RH +L+ ++ KGDIY G Sbjct: 62 AAGETPLELADRVMKRFQSLWEKLEISHTDFIRTTQERHKKGVSVLFDRVMAKGDIYLGE 121 Query: 124 YSGWYSLRDEAYYNDDEV--YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y WY E ++ + ++ YK D + P + ++EE YFFR+S YQD+LL++ E Sbjct: 122 YEDWYCTPCETFWTETQLIDYKCPDC------NRPTEKLKEESYFFRMSKYQDQLLAHIE 175 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 ++P+FI P RRNE+ISFVK GL+DLS+SR TF+WGI +P + ++++YVW DALTNY+T Sbjct: 176 ANPDFIQPKSRRNEIISFVKEGLRDLSVSRTTFEWGIPVPGNDKHVIYVWFDALTNYITA 235 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY D +G+ K+WP D+H+IGKDILRFH +YWP FL++A LP+PK+VF+HG+ +G+ Sbjct: 236 LGYPDE-EGNFGKYWPCDVHLIGKDILRFHTVYWPTFLMAAGLPIPKRVFAHGWWTVEGQ 294 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSL NV++P ++++ GVDA+RYFL+RE+ G DG + L R+N+DLAN +GNL Sbjct: 295 KMSKSLQNVVEPNMLVDKYGVDAVRYFLLREVPFGLDGDFSHQALIHRINSDLANDLGNL 354 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++RS +M+ K + G + PG +E D++ ++ ++ +++ RAL + ++ Sbjct: 355 LNRSTAMLGKYFGGELQAPGEESELDKAYREKTLAMIGQVDGFIEDMAFSRALQAIWEVI 414 Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S ++Y D PW L K +R STV+Y +E R + LL AF+PK A K L Sbjct: 415 SAGNKYIDETAPWTLAKDPEQRERLSTVMYYMLESQRIVYTLLSAFMPKTAEKGLSYLGW 474 Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 + LKPG + K + +FPR Sbjct: 475 PEAASAEGLAWGGLKPGTAIAKA-EALFPR 503 >gi|325845442|ref|ZP_08168735.1| methionine--tRNA ligase [Turicibacter sp. HGF1] gi|325488548|gb|EGC90964.1| methionine--tRNA ligase [Turicibacter sp. HGF1] Length = 655 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 219/514 (42%), Positives = 337/514 (65%), Gaps = 11/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + YI+T I YP+ + HIG AY + +D +AR+ R G DV F TG DEHGQKI + AQ Sbjct: 3 KPTFYITTPIYYPSGKFHIGTAYTTVASDAMARYKRSRGFDVRFLTGMDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG + +VD+ + + + +++DI+ DDFIRTTEKRH + ++ K + GDIYKG Sbjct: 63 EAGKEPQAYVDEIADAAKKLWEMMDITNDDFIRTTEKRHEEMVEKIFAKFMENGDIYKGH 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+YY + ++ DG+ + + V+ ++EE YFF + Y D+L+ YY ++ Sbjct: 123 YEGLYCTPCESYYTETQL---VDGKCPDCGRD-VKVVKEESYFFNMKKYADRLMEYYNAN 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEFILP R+NE+++ F+K GL+DLS+SR TFDWG+K+P D ++++YVW+DAL+NY+T Sbjct: 179 PEFILPESRKNEMVNNFIKPGLEDLSVSRTTFDWGVKVPGDIKHVIYVWVDALSNYITAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY + + K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKK+F+HGFI+ K K Sbjct: 239 GYGSDNEELFNKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKIFAHGFIMMKDGK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+ P +IE G+DA+RYFL+RE+ G+DG + + +RVN DLAN +GNL+ Sbjct: 299 MSKSKGNVVYPEMLIERYGLDAVRYFLLRELPFGQDGVFSPESFVERVNFDLANDLGNLL 358 Query: 363 SRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 +R+VSMI K +DG+IP G TE D+++ ++++ +N ++ L+ + +LV Sbjct: 359 NRTVSMINKYFDGVIPAYAGQVTEFDQTLEDFIKTTVEKVEKNFEDMQFSIVLSDIWALV 418 Query: 422 SEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + ++Y D PW L K ++A+ +V+ E +RQ+AI+++ F+P+ +IF L + Sbjct: 419 ARTNKYIDETAPWVLAKDEANKAALESVMCHLAESLRQIAIMIEPFMPRTTPQIFAQLGI 478 Query: 480 -ADENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510 ++ + SL+ L G + PIFPR Sbjct: 479 EGAASKEWSSLNNYNTLAEGTKVVSKGTPIFPRL 512 >gi|158321682|ref|YP_001514189.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] gi|158141881|gb|ABW20193.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] Length = 654 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 217/510 (42%), Positives = 326/510 (63%), Gaps = 10/510 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I YP+ + HIGH Y + ADVLARF R G DV F TGTDEHG+KI +AA+ AG Sbjct: 6 FYLTTPIYYPSGRLHIGHTYTTVAADVLARFKRFTGYDVQFLTGTDEHGEKIQEAAEKAG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 V+ K ++D+ +D+ +DISYD FIRTT++ H + + +++ + DKGDIYK Y G Sbjct: 66 VSPKEYLDKIVEEIKDLWKKMDISYDIFIRTTDQEHEERVQKIFQTLYDKGDIYKSEYEG 125 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WY E+++ + ++ +G + P +EE YFF+LS YQD+LL Y+E HPE Sbjct: 126 WYCTPCESFWTETQL---KEGHVCPDCNRPAHLAKEEAYFFKLSKYQDRLLQYFEEHPEI 182 Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 P R+NE+++ F+K GL+DL +SR TFDWGIK+P DP++I+YVW DA+ NY+T GY Sbjct: 183 CYPESRKNEMVNNFLKPGLEDLCVSRTTFDWGIKVPFDPKHIIYVWFDAVCNYITALGYG 242 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + + + K+WPAD+H++GK+I+RFH I WPA L++ +PLPK V+ HG+IL +K+SK Sbjct: 243 SDNEETFNKYWPADVHLVGKEIVRFHTIIWPAILMALEIPLPKMVYGHGWILFGADKMSK 302 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S GN++ P +IE G+DA++YFL+RE G+DG + R+N+DLAN +GNLVSR+ Sbjct: 303 SKGNIVYPEPLIERYGLDAIKYFLLREFTFGQDGNHTNRNFINRLNSDLANDLGNLVSRT 362 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 VSMI K +G+IP+PG E D S+ + + ++ + H L ++ +V + + Sbjct: 363 VSMIEKYNEGIIPSPGVEGEFDGSLKEIATGAASKVENAINKLQFHDGLEEIWKVVRKTN 422 Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD-ILFVADE 482 +Y D PW L K N +R +TVLY E IR +++L++ F+ NKI+ + D+ Sbjct: 423 KYIDETAPWVLAKDEANKERLNTVLYNLAEAIRIISVLIKPFMESTTNKIWSQVGITEDQ 482 Query: 483 NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 ++S +LK G + K + +FPR Sbjct: 483 GTDWESTGTFGKLKAGTAVKKG-EALFPRL 511 >gi|295102779|emb|CBL00324.1| methionyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6] Length = 665 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 215/516 (41%), Positives = 324/516 (62%), Gaps = 15/516 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E + YI+T I YP+ + HIGH+Y + D LARF R+ G DV+F TGTDEHGQKI Sbjct: 1 MSEHKTFYITTPIYYPSDKLHIGHSYTTVACDALARFKRMQGCDVMFLTGTDEHGQKIQD 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A +AGVT K +VD+ +D+ ++DISYD FIRTT+ H ++C+ ++ K+ ++GDIY Sbjct: 61 KAADAGVTPKEYVDKIVATVKDLWKLMDISYDRFIRTTDDYHMESCQKIFTKLYEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 KG Y+G Y E+++ D ++ G + Y+A EE YFF+ Y D+L Sbjct: 121 KGEYTGHYCKPCESFWTDSQLVDGKCPECGREVYDAH--------EEAYFFKTGKYADRL 172 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 L YE +P+FI P R+NE+I+F+K GL+D +SR + WGI +P DP++ MYVW+DAL+ Sbjct: 173 LKLYEENPQFIQPESRKNEMIAFIKQGLQDTCVSRTSVKWGIPVPFDPKHTMYVWVDALS 232 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NY++ GY + +KFWPADLH++GK+ILRFH I WPA L++ +LPLPK+VF HG++ Sbjct: 233 NYISALGYGNEKYDEYSKFWPADLHMVGKEILRFHTILWPAMLMALDLPLPKRVFGHGWL 292 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L G K+SKS+GNV+DP+ + + GVDA+RYFL+REI G DG + + L R+N+DLAN Sbjct: 293 LMNGGKMSKSVGNVVDPVILCDRYGVDAIRYFLLREIPFGNDGMFTNEALINRINSDLAN 352 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNL+SR+V+M K + G + D + ++ S +L ++ +M + I +AL + Sbjct: 353 DLGNLLSRTVAMCEKYFGGTVHKVAGTEAIDTELETMTSELLGKVTADMDSLTIPQALME 412 Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + +++ ++Y D PW L K +RA +VLY E +R ILL A++P A K+ Sbjct: 413 IFAVIQRANKYIDETAPWALAKDEANRARLESVLYHLCEALRVCGILLNAYLPSTAPKMM 472 Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + L + + + + +HK + +FPR Sbjct: 473 EQLGLDASAIDVEKAAYGAQESYTVHKG-EALFPRI 507 >gi|293374654|ref|ZP_06620969.1| methionine--tRNA ligase [Turicibacter sanguinis PC909] gi|292646744|gb|EFF64739.1| methionine--tRNA ligase [Turicibacter sanguinis PC909] Length = 655 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 219/514 (42%), Positives = 337/514 (65%), Gaps = 11/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + YI+T I YP+ + HIG AY + +D +AR+ R G DV F TG DEHGQKI + AQ Sbjct: 3 KPTFYITTPIYYPSGKFHIGTAYTTVASDAMARYKRSRGFDVHFLTGMDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG + +VD+ + + + +++DI+ DDFIRTTEKRH + ++ K + GDIYKG Sbjct: 63 EAGKEPQAYVDEIADAAKKLWEMMDITNDDFIRTTEKRHEEMVEKIFAKFMENGDIYKGH 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+YY + ++ DG+ + + V+ ++EE YFF + Y D+L+ YY ++ Sbjct: 123 YEGLYCTPCESYYTETQL---VDGKCPDCGRD-VKVVKEESYFFNMKKYADRLMEYYNAN 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEFILP R+NE+++ F+K GL+DLS+SR TFDWG+K+P D ++++YVW+DAL+NY+T Sbjct: 179 PEFILPESRKNEMVNNFIKPGLEDLSVSRTTFDWGVKVPGDIKHVIYVWVDALSNYITAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY + + K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKK+F+HGFI+ K K Sbjct: 239 GYGSDNEELFNKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKIFAHGFIMMKDGK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+ P +IE G+DA+RYFL+RE+ G+DG + + +RVN DLAN +GNL+ Sbjct: 299 MSKSKGNVVYPEMLIERYGLDAVRYFLLRELPFGQDGVFSPESFVERVNFDLANDLGNLL 358 Query: 363 SRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 +R+VSMI K +DG+IP G TE D+++ ++++ +N ++ L+ + +LV Sbjct: 359 NRTVSMINKYFDGVIPAYAGQVTEFDQTLEDFIKTTVEKVEKNFEDMQFSIVLSDIWALV 418 Query: 422 SEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + ++Y D PW L K ++A+ +V+ E +RQ+AI+++ F+P+ +IF L + Sbjct: 419 ARTNKYIDETAPWVLAKDEANKAALESVMCHLAESLRQIAIMIEPFMPRTTPQIFAQLGI 478 Query: 480 -ADENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510 ++ + SL+ L G + PIFPR Sbjct: 479 EGAASKEWNSLNNYNTLAEGTKVVSKGTPIFPRL 512 >gi|39997330|ref|NP_953281.1| methionyl-tRNA synthetase [Geobacter sulfurreducens PCA] gi|39984221|gb|AAR35608.1| methionyl-tRNA synthetase [Geobacter sulfurreducens PCA] gi|298506267|gb|ADI84990.1| methionyl-tRNA synthetase [Geobacter sulfurreducens KN400] Length = 510 Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust. Identities = 220/505 (43%), Positives = 323/505 (63%), Gaps = 8/505 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y N PHIGHAY + ADVLAR+ +L G +V F TGTDEHGQK+ KAA AG Sbjct: 5 FYVTTPIYYVNDVPHIGHAYTTLAADVLARYKKLKGYEVFFLTGTDEHGQKVEKAANTAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T D+ + F+ + + LDI Y DFIRTT++RH ++ KI +GDIY G Y Sbjct: 65 ETPLELADRVVKRFQGLWEKLDIQYTDFIRTTQERHKKGVSHIFTKIMAQGDIYLGEYED 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WY E ++ + ++ DG+ + + PV ++EE YFFR+S YQ++LL++ E++P+F Sbjct: 125 WYCTPCETFWTETQL---IDGKCPDC-NRPVDKLKEESYFFRMSKYQEQLLAHIEANPDF 180 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P RRNE+ISFVK GL+DLS+SR +F+WGI +P + ++++YVW DALTNY+T GY D Sbjct: 181 IQPKSRRNEIISFVKEGLRDLSVSRTSFNWGIPVPGNEKHVIYVWFDALTNYITALGYPD 240 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 K FWP D+H+IGKDILRFHA+YWP FL++A LP+PKKVF+HG+ +G+K+SKS Sbjct: 241 EQSAFKT-FWPVDVHLIGKDILRFHAVYWPTFLMAAGLPVPKKVFAHGWWTVEGQKMSKS 299 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 L NV++P +++ G+DA+RYFL+RE+ G DG + L R+N+DLAN +GNL++RS Sbjct: 300 LQNVVEPNMLVDRYGIDAVRYFLLREVPFGLDGDFSHAALVHRINSDLANDLGNLLNRST 359 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +M+ K +DG++P PG TE D + +++++ M + L + ++S ++ Sbjct: 360 AMVNKYFDGVLPAPGPQTELDTAFREKTEAMVRQLDACMDELAFSKGLQAIWEVISAGNK 419 Query: 427 YFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 Y D PW L K R TV+Y +E R + ++L AF+P+ + K L + R Sbjct: 420 YIDETAPWALAKDPAKREYLGTVMYTLLEAQRIVHLVLSAFMPRTSAKALGYLGWTEPCR 479 Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPR 509 RL PG ++ K + +FPR Sbjct: 480 EEDLAWGRLAPGTLIVKA-EALFPR 503 >gi|290967766|ref|ZP_06559319.1| methionine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] gi|290782125|gb|EFD94700.1| methionine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] Length = 645 Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust. Identities = 213/476 (44%), Positives = 310/476 (65%), Gaps = 5/476 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+++ YI+T I YP+A+ HIGH Y IAD LARFHRL G +V F TG+DEHGQKI + Sbjct: 1 MAEKKRYYITTPIYYPSAKLHIGHTYCTTIADTLARFHRLRGDEVFFLTGSDEHGQKIQR 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ G+ +V+ F+D+ L IS DDFIRTTE RH + L + KGDIY Sbjct: 61 AAEEKGIQPIEYVNDIVALFQDLWKRLQISNDDFIRTTEARHEKVVQKLMEISYQKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y+GWY E+++ ++++ +G P++ ++EE YF +++ Y D+ L + Sbjct: 121 KGEYTGWYCTPCESFWPENKLPEGK--HICPDCGRPLELVKEEAYFLKMNKYADRWLQFI 178 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E +PEFI P RRNE+I+FVKSGL+DL +SR +FDWG+K+P DP++++YVW DAL NYLT Sbjct: 179 EENPEFIQPESRRNEMIAFVKSGLEDLCVSRTSFDWGVKVPWDPKHVVYVWFDALANYLT 238 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GYLDNP+ K KFWPA LH++GK+I+RFH I WP L+S +LPLPK+VF HG+++ G Sbjct: 239 AIGYLDNPEQFK-KFWPATLHLVGKEIVRFHTIIWPIILMSCDLPLPKQVFGHGWLIVDG 297 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKSLGNV+DP+ +I G DALRY+L++EI G+DG + R+N+DLAN +GN Sbjct: 298 TKMSKSLGNVVDPVPLIARYGADALRYYLLKEIRLGQDGNFSLPSFLGRINSDLANDLGN 357 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+ R+++M+ K G++P P A D + + +L + M+ I+ A+ + Sbjct: 358 LLQRTLAMVEKYEQGIVPAPSATAPVDMQLRQAAAEMLDVYTQAMETMQINEAINALWGF 417 Query: 421 VSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + ++Y D PW L K + +R TVLY +E +R +AI + +P A +I+ Sbjct: 418 IHRTNKYIDETMPWSLAKEDAQRERLRTVLYNLIEALRIIAISVSPIMPACAEEIW 473 >gi|304438288|ref|ZP_07398229.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368654|gb|EFM22338.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 516 Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust. Identities = 219/484 (45%), Positives = 323/484 (66%), Gaps = 7/484 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+A+ HIGHAY +AD +AR+ RL G DV F TG+DEHGQKI + Sbjct: 1 MSEKTPFYITTPIYYPSAKLHIGHAYCTTVADTIARYKRLAGFDVFFLTGSDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ G+T +VD+ +F+++ +L ISYDDFIRTT+ RH++ + ++++I D+GDIY Sbjct: 61 AAEKEGITPIRYVDRIVASFQELWRLLGISYDDFIRTTQPRHYELVQDIFQRIYDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y E+Y+ ++ +G + H PVQ + EE YFFR+S Y D+LL+Y Sbjct: 121 KGEYKGLYCTPCESYWTRLQL--DENGCCPDC-HRPVQEVSEEAYFFRMSKYADRLLAYI 177 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 HP+FI P+ RRNE+I+F++ GL+DL +SR +FDWGI +P DP++++YVW DALTNYLT Sbjct: 178 NEHPDFIQPVSRRNEMIAFIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLT 237 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GYL + + K+WPAD+H++GK+I+RFH I W L++ L LPKKV+ HG+++ G Sbjct: 238 PIGYLHDKEMFH-KYWPADVHLVGKEIVRFHTIIWGCMLMALGLDLPKKVYGHGWLIVNG 296 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKS+GNV+DP+ +IEE G DA+RYFL+REIA G+DG +D L R+N+DLAN +GN Sbjct: 297 AKMSKSVGNVVDPVALIEEFGADAIRYFLLREIALGQDGNISRDALIGRINSDLANDLGN 356 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+ R++SM K G+I T+ D ++ ++ + +++ E M + A+ V +L Sbjct: 357 LLHRTLSMAKKYRKGVITKGEGRTDFDAALETMTAATVRDYTEQMDAMELSAAVKTVWAL 416 Query: 421 VSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL- 477 +S ++Y D PW L K A VLY VE + +++L+ F+P A +I + L Sbjct: 417 ISRTNKYIDETAPWMLAKDEAKAAQLDAVLYHLVETLHIVSVLIAPFMPTTARRIHEQLG 476 Query: 478 FVAD 481 F AD Sbjct: 477 FHAD 480 >gi|292670061|ref|ZP_06603487.1| methionine-tRNA ligase [Selenomonas noxia ATCC 43541] gi|292648249|gb|EFF66221.1| methionine-tRNA ligase [Selenomonas noxia ATCC 43541] Length = 513 Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust. Identities = 225/513 (43%), Positives = 325/513 (63%), Gaps = 8/513 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + YI+T I YP+A+ HIGHAY +AD +ARF RL G DV F TG+DEHGQKI + Sbjct: 1 MSGKTPFYITTPIYYPSAKLHIGHAYCTTVADTIARFKRLAGCDVFFLTGSDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ GVT +VD+ F+++ +L ISYDDFIRT+E RH++ + ++++I D+GDIY Sbjct: 61 AAEKEGVTPLQYVDRIVAGFQELWRLLGISYDDFIRTSEPRHYELVQNIFQQIYDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y E+Y+ ++ +G + H PVQ + EE YFFR+S Y D+L++Y Sbjct: 121 KGAYKGLYCTPCESYWTKLQL--DENGCCPDC-HRPVQEVAEEAYFFRMSKYADRLIAYI 177 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 HP+FI P+ RRNE+I+F++ GL+DL +SR +FDWGI +P DP++++YVW DALTNYLT Sbjct: 178 NEHPDFIQPVSRRNEMIAFIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLT 237 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GYL + + +K+WPAD+H++GK+I+RFH I W L++ L LPKKV+ HG+++ G Sbjct: 238 PIGYLHDKE-KFSKYWPADVHLVGKEIVRFHTIIWGCMLMALGLDLPKKVYGHGWLIVDG 296 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKS+GNV+DPI +IEE G DA+RYFL+REI G+DG +D L R+N+DLAN +GN Sbjct: 297 AKMSKSVGNVVDPIALIEEFGADAVRYFLLREITLGQDGNISRDALIGRINSDLANDLGN 356 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+ R++SM K G+I T+ D ++ + ++ E M+ + A+ +L Sbjct: 357 LLHRTLSMAKKYRKGVIAKGTGRTDFDAALEEMAQETVKTYTEQMEQMELSAAIKTAWAL 416 Query: 421 VSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 +S ++Y D PW L K A VLY VE +R +IL+ F+P A +I L Sbjct: 417 ISRTNKYIDETAPWTLAKDEAKAAELDAVLYHLVESLRITSILISPFLPVTARRIHAQLG 476 Query: 479 VADENRCFQSLDQRLK--PGFMLHKTFDPIFPR 509 A + Q D P T + +FPR Sbjct: 477 FATDFDAVQLSDAAWGGLPDGHAVGTAEQLFPR 509 >gi|260888295|ref|ZP_05899558.1| methionine--tRNA ligase [Selenomonas sputigena ATCC 35185] gi|260861831|gb|EEX76331.1| methionine--tRNA ligase [Selenomonas sputigena ATCC 35185] Length = 665 Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust. Identities = 218/512 (42%), Positives = 332/512 (64%), Gaps = 10/512 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+ YI+T I YP+A+ HIGHAY IAD +ARF RL DV F TG+DEHGQKI + A+ Sbjct: 14 RKSFYITTPIYYPSAKLHIGHAYCTTIADAVARFKRLTDHDVFFLTGSDEHGQKIQQKAE 73 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT +VD+ F+ + L IS DDFIRTTE+RH + ++++I +KGDIYKG Sbjct: 74 EEGVTPIAYVDKIVAGFQGLWQKLHISNDDFIRTTEERHQRVVQEVFRRIYEKGDIYKGK 133 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+Y+ + ++ ADG+ + V +EE+ YFF++S Y D++L+Y E + Sbjct: 134 YKGLYCTPCESYWTERQL---ADGKCPDCGRE-VAEVEEDAYFFKMSHYADRVLAYIEEN 189 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P+ RRNE+I+F+K GL+DL +SR +FDWGI +P P +++YVW DALTNYLT G Sbjct: 190 PDFIQPVSRRNEMINFIKQGLEDLCISRTSFDWGIPVPIAPDHVIYVWFDALTNYLTPIG 249 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 +LD+P+ + K+WPAD+H++GK+I+RFH+I WP L++ +LPLPK V+ HG+++ G+K+ Sbjct: 250 FLDDPEKFE-KYWPADVHLVGKEIVRFHSIIWPCILMALDLPLPKMVYGHGWLIVDGDKM 308 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP+++I+E G DA+RYFL+REI G+DG + +D L R+NADLAN +GNL+ Sbjct: 309 SKSKGNVVDPVQLIDEFGADAIRYFLLREINLGQDGNFSRDALITRINADLANDLGNLLH 368 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+++MI K DG++ +E D + L+ + M+ + A+ + +S Sbjct: 369 RTLNMIGKFQDGVVEEARGESEIDRAFLADAESAIAAYEREMEEMKLQSAIKTTWAFISR 428 Query: 424 VDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++Y D PW L K + + LY E +R++++L++ F+P+ A KI+ L + Sbjct: 429 ANKYIDETMPWALAKDAAKKQELTNTLYNLAESLRRISVLIEPFMPETAAKIWHQLGMEG 488 Query: 482 ENRCFQSLDQRLKPGFMLHK---TFDPIFPRF 510 + + D R GF+ + + +FPR Sbjct: 489 DFSRVRFADVRTWGGFLAGTHVGSPEQLFPRI 520 >gi|253699686|ref|YP_003020875.1| methionyl-tRNA synthetase [Geobacter sp. M21] gi|251774536|gb|ACT17117.1| methionyl-tRNA synthetase [Geobacter sp. M21] Length = 509 Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust. Identities = 224/506 (44%), Positives = 325/506 (64%), Gaps = 12/506 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I Y N PHIGHAY + ADVLAR+ RL G DV F TGTDEHGQK+ KAA AG Sbjct: 6 YVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLKGFDVFFLTGTDEHGQKVEKAAIAAGE 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T D+ + F+ + + L+IS DFIRTT++RH +L++++ +KGDIY G Y W Sbjct: 66 TPLELADRVMKRFQSLWEKLEISNTDFIRTTQERHKKGVSVLFERVMEKGDIYLGEYEDW 125 Query: 128 YSLRDEAYYNDDEV--YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 Y E ++ + ++ YK D + P + ++EE YFFR+S YQD+LL++ E++P+ Sbjct: 126 YCTPCETFWTETQLIDYKCPDC------NRPTEKLKEESYFFRMSKYQDQLLAHIEANPD 179 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RRNE+ISFVK GL+DLS+SR TF WGI +P + ++++YVW DALTNY+T GY Sbjct: 180 FIQPKSRRNEIISFVKEGLRDLSVSRTTFQWGIPVPGNDKHVVYVWFDALTNYITALGYP 239 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D G+ K+WP D+H+IGKDILRFH +YWP FL++A LP+PKKVF+HG+ +G+K+SK Sbjct: 240 DEA-GNFGKYWPCDVHLIGKDILRFHTVYWPTFLMAAGLPIPKKVFAHGWWTVEGQKMSK 298 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SL NV++P ++++ GVDA+RYFL+RE+ G DG + L R+N+DLAN +GNL++RS Sbjct: 299 SLQNVVEPNMLVDKYGVDAVRYFLLREVPFGLDGDFSHQALVHRINSDLANDLGNLLNRS 358 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +M+ K + G++ PG TE D + + ++ ++ +++ RAL V ++S + Sbjct: 359 TAMLGKYFGGVLQAPGEETELDAAYREKTAAMIGQVDGFIEDLAFSRALQAVWEVISAGN 418 Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +Y D PW L K +R +TV+Y +E R + LL AF+PK + K L Sbjct: 419 KYIDETAPWTLAKDPEKRERLATVMYYMLESQRVVYSLLCAFMPKTSEKGLCCLGWPKAA 478 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPR 509 LKPG + K + +FPR Sbjct: 479 EAADLAWGGLKPGTSIAKA-EALFPR 503 >gi|319891443|ref|YP_004148318.1| Methionyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] gi|317161139|gb|ADV04682.1| Methionyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] gi|323465387|gb|ADX77540.1| methionyl-tRNA synthetase [Staphylococcus pseudintermedius ED99] Length = 657 Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust. Identities = 226/521 (43%), Positives = 338/521 (64%), Gaps = 15/521 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ HIGHAY + DV+AR+ RL G DV + TGTDEHGQKI + AQ Sbjct: 3 KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRLQGFDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 NAG++ ++D ++ + + + LDIS DDFIRTTE+RH + +++K+ KGDIY G Sbjct: 63 NAGMSELDYLDGMIKDIKALWEKLDISNDDFIRTTERRHTEVVEKIFEKLLSKGDIYLGE 122 Query: 124 YSGWYSLRDEAYYND----DEVY---KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y GWYS+ DE +Y + D VY K G+ ++ H V+ ++EE YFF+LS Y D+L Sbjct: 123 YEGWYSVPDETFYTETQLVDPVYEDGKIVGGKSPDSGHE-VELVKEESYFFKLSNYTDRL 181 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 L++Y++HPEFI P R+NE+I+ F+K GL+DL++SR +F+WG+K+P +P++++YVW+DAL Sbjct: 182 LAFYDAHPEFIQPPSRKNEMINNFIKPGLEDLAVSRTSFNWGVKVPSNPKHVVYVWLDAL 241 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY++ GYL + D ++WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+HG+ Sbjct: 242 VNYVSALGYLTDDDHLFRQYWPADIHLMAKEIVRFHSIIWPIILMALDLPLPKKVFAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + R N DLA Sbjct: 302 VLMKDGKMSKSKGNVMDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVDRTNFDLA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNLV+R++SMI K +DG +P G E DE + + ++ E+M AL Sbjct: 362 NDLGNLVNRTISMINKYFDGELPAYQGPTHELDEEMEQMALDTVRAYHESMDKLQFSVAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472 + V L+S ++Y D PW L K +A+ V+ VE IR A+LL+ F+ + Sbjct: 422 STVWKLISRTNKYIDETTPWILAKDESQKAALGNVMAHLVENIRFAAVLLRPFLTHAPYQ 481 Query: 473 IFDILFVADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 IF+ L + +E F+ L +L M+ + PIFPR Sbjct: 482 IFEQLHIHNEALHGFEGLATYGQLTEPIMVTEKPQPIFPRL 522 >gi|150021072|ref|YP_001306426.1| methionyl-tRNA synthetase [Thermosipho melanesiensis BI429] gi|149793593|gb|ABR31041.1| methionyl-tRNA synthetase [Thermosipho melanesiensis BI429] Length = 634 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 214/486 (44%), Positives = 320/486 (65%), Gaps = 5/486 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K Y++T I Y N++PHIG AY II D++AR+ RL G DV + TGTDEHGQKI +AA+ Sbjct: 2 KKFYLTTPIYYVNSEPHIGSAYTTIIGDIIARYKRLIGYDVFYLTGTDEHGQKIMQAAKK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K D+ S F + L I+ D FIRTT+ +H T ++ K+ + GDIYKG Y Sbjct: 62 REIEPKQLCDELSEKFSQLWKDLKITNDYFIRTTDPKHMKTVQLFVSKMLENGDIYKGIY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY + E Y+N+DE + + ++EEE YFFRLS Y + LL +++ +P Sbjct: 122 KGWYCIPCETYWNEDETEQIEGKHICPTCGRELNFVEEENYFFRLSKYTEPLLKHFKENP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +F+ P RRNE++ ++SGLKDLS++R TFDWGI +P+DP +++YVW+DAL NY++ GY Sbjct: 182 DFVEPDFRRNEMLKILESGLKDLSITRTTFDWGIPMPNDPNHVIYVWVDALINYISAIGY 241 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + + + K+WPADLH+IGK+I RFH++ WPA L+S LPLPKK+F+HG++ G+KIS Sbjct: 242 GSDQEKFE-KWWPADLHLIGKEINRFHSLIWPAMLMSVGLPLPKKIFAHGWLTVNGQKIS 300 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSLGN IDP E +++ G D +RY+L R+I GKDG + ++ L R+N+DLAN GNL+ R Sbjct: 301 KSLGNAIDPREFVKKYGNDVVRYYLARDIVFGKDGDFSEENLVHRLNSDLANDYGNLLHR 360 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 +++M++K++D +IP P E DE ++ V ++ E M++ + AL + + + Sbjct: 361 TIAMVVKNFDSIIPEPNNIQEIDEKLIKEYFEVKEKYLEYMESYKLTNALETIWEYIRYI 420 Query: 425 DRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 ++YFD KPW L K+ N R STVLY T+E ++A LL F+P + ++F+ L + Sbjct: 421 NKYFDENKPWVLAKEGNKGRLSTVLYNTLEAFLKVATLLIPFMPYSSEEVFNRL---GQE 477 Query: 484 RCFQSL 489 R FQ + Sbjct: 478 RNFQKI 483 >gi|148270780|ref|YP_001245240.1| methionyl-tRNA synthetase [Thermotoga petrophila RKU-1] gi|147736324|gb|ABQ47664.1| methionyl-tRNA synthetase [Thermotoga petrophila RKU-1] Length = 629 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 213/470 (45%), Positives = 311/470 (66%), Gaps = 2/470 (0%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I Y N++PHIG AY I+AD++AR+ R G DV F TGTDEHGQK+ +AAQ A Sbjct: 2 KFYITTPIYYVNSEPHIGSAYTTIVADIIARYKRFMGYDVFFLTGTDEHGQKVLQAAQQA 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G + F D+ + F+ + L I+ D FIRTT++ H T + K+ + GD+YKG Y Sbjct: 62 GKDPQEFCDELAEKFKQLWKELKITNDYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYK 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY + E ++N+DEV K + ++ PV+W+EEE YFFRLS Y+D LL YYE HP+ Sbjct: 122 GWYCVPCETFWNEDEVIKEGEERFCPECKRPVKWVEEENYFFRLSKYRDPLLKYYEEHPD 181 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 F+ P RRNE++ ++ GLKDLS++R TF WG+ + DDP++++YVW+DAL NY++ GY Sbjct: 182 FVEPDFRRNEMLKILEGGLKDLSITRTTFKWGVPMKDDPEHVIYVWVDALINYISAIGYG 241 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 N D K+WPADLH+IGK+I RFH+I WPA L+S LPLPKKVF+HG++ G+KISK Sbjct: 242 WN-DEMFNKWWPADLHLIGKEINRFHSIIWPAMLMSVGLPLPKKVFAHGWLTVNGQKISK 300 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGN IDP ++ G D +RY+L+R+I GKDG + ++ L R+N+DLAN GNL+ R Sbjct: 301 SLGNAIDPRFFVKRYGNDVVRYYLIRDIMFGKDGDFSEERLVHRLNSDLANDYGNLLHRI 360 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +MI K ++G +P+P A D + E M + + AL ++ +++V+ Sbjct: 361 TAMIKKYFNGRLPSPSAQEGLDSWLKERFFETKDAYHELMDSYRLTEALDKIWEFIADVN 420 Query: 426 RYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +YF+ KPW L K+ N +R TVLY ++E + ++A++ +P + ++F Sbjct: 421 KYFNDTKPWILGKEGNMERLGTVLYNSLEAVFKVALMTLPVMPDTSKEVF 470 >gi|170289510|ref|YP_001739748.1| methionyl-tRNA synthetase [Thermotoga sp. RQ2] gi|170177013|gb|ACB10065.1| methionyl-tRNA synthetase [Thermotoga sp. RQ2] Length = 629 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 213/470 (45%), Positives = 311/470 (66%), Gaps = 2/470 (0%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I Y N++PHIG AY I+AD++AR+ R G DV F TGTDEHGQK+ +AAQ A Sbjct: 2 KFYITTPIYYVNSEPHIGSAYTTIVADIIARYKRFMGYDVFFLTGTDEHGQKVLQAAQQA 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G + F D+ + F+ + L I+ D FIRTT++ H T + K+ + GD+YKG Y Sbjct: 62 GKDPQEFCDELAEKFKQLWKELKITNDYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYK 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY + E ++N+DEV K + ++ PV+W+EEE YFFRLS Y+D LL YYE HP+ Sbjct: 122 GWYCVPCETFWNEDEVIKEGEERFCPECKRPVKWVEEENYFFRLSKYRDPLLKYYEEHPD 181 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 F+ P RRNE++ ++ GLKDLS++R TF WG+ + DDP++++YVW+DAL NY++ GY Sbjct: 182 FVEPDFRRNEMLKILEGGLKDLSITRTTFKWGVPMKDDPEHVIYVWVDALINYISAIGYG 241 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 N D K+WPADLH+IGK+I RFH+I WPA L+S LPLPKKVF+HG++ G+KISK Sbjct: 242 WN-DEMFNKWWPADLHLIGKEINRFHSIIWPAMLMSVGLPLPKKVFAHGWLTVNGQKISK 300 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGN IDP ++ G D +RY+L+R+I GKDG + ++ L R+N+DLAN GNL+ R Sbjct: 301 SLGNAIDPRFFVKRYGNDVVRYYLIRDIMFGKDGDFSEERLVHRLNSDLANDYGNLLHRI 360 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +MI K ++G +P+P A D + E M + + AL ++ +++V+ Sbjct: 361 TAMIKKYFNGRLPSPSAQEGLDSWLKERFFETKDAYHELMDSYRLTEALDKIWEFIADVN 420 Query: 426 RYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +YF+ KPW L K+ N +R TVLY ++E + ++A++ +P + ++F Sbjct: 421 KYFNDTKPWILGKEGNMERLGTVLYNSLEAVFKVALMTLPVMPDTSKEVF 470 >gi|327438102|dbj|BAK14467.1| methionyl-tRNA synthetase [Solibacillus silvestris StLB046] Length = 653 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 219/517 (42%), Positives = 335/517 (64%), Gaps = 11/517 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY + +D +AR+ RL G DV F TG DEHGQKI + Sbjct: 1 MSEQQTFYITTPIYYPSGKFHIGTAYTTVASDAIARYKRLKGFDVRFLTGMDEHGQKIQE 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ A + + +V++ + + + + +DISY+DFI+TTE RH D+ +++K D GDIY Sbjct: 61 KAQEANMHPQDYVNEIAEGAKKLWNTMDISYNDFIQTTETRHTDSVEKIFQKFLDNGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y + E+YY + ++ DG+ + + VQ ++EE YFF + Y D+LL+YY Sbjct: 121 KGEYEGLYCVPCESYYTETQL---VDGKCPDCGRD-VQKVKEESYFFNMKKYADRLLAYY 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 E++PEFI P R+NE+I+ F+K GL+DLS+SR +FDWGIK+P +P++++YVW+DAL+NY+ Sbjct: 177 ENNPEFIEPESRKNEMINNFIKPGLEDLSVSRTSFDWGIKVPGNPKHVIYVWVDALSNYI 236 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T+ GY + + K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKK+F+HGFI+ K Sbjct: 237 TSLGYGSDNEELFNKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKIFAHGFIMMK 296 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GNV+ P +IE G+DA RYFL+RE+ G+DG + + +R N DLAN +G Sbjct: 297 DGKMSKSKGNVVYPEMLIERYGLDATRYFLLRELPFGQDGVFSPESFVERTNFDLANDLG 356 Query: 360 NLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 NL++R+VSM+ K +DG+IPT T+ DE++ V E+M L+++ Sbjct: 357 NLLNRTVSMMNKYFDGVIPTENLEATQFDEALKEHAESVRIRYEESMDKMQFSVVLSELW 416 Query: 419 SLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 SLVS ++Y D PW L K D + + V+ E +R +A+++Q F+ +I + Sbjct: 417 SLVSRTNKYIDETSPWVLAKDEADHNKLAAVMNNLAESLRHIAVMIQPFMTNAPKQIIEQ 476 Query: 477 LFVADEN---RCFQSLDQRLKPGFMLHKTFDPIFPRF 510 L + +++ ++ + + + PIFPR Sbjct: 477 LGLDEKSLQWDTIETFGNVIPKNIKVAEKGTPIFPRL 513 >gi|15643843|ref|NP_228891.1| methionyl-tRNA synthetase [Thermotoga maritima MSB8] gi|6094407|sp|O33925|SYM_THEMA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|4981630|gb|AAD36162.1|AE001768_11 methionyl-tRNA synthetase [Thermotoga maritima MSB8] gi|2645225|gb|AAB87143.1| methionyl-tRNA synthetase [Thermotoga maritima MSB8] Length = 629 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 213/470 (45%), Positives = 311/470 (66%), Gaps = 2/470 (0%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I Y N++PHIG AY I+AD++AR+ R G DV F TGTDEHGQK+ +AAQ A Sbjct: 2 KFYITTPIYYVNSEPHIGSAYTTIVADIIARYKRFMGYDVFFLTGTDEHGQKVLQAAQQA 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G + F D+ + F+ + L I+ D FIRTT++ H T + K+ + GD+YKG Y Sbjct: 62 GKDPQEFCDELAEKFKRLWKELKITNDYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYK 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY + E ++N+DEV K + ++ PV+W+EEE YFFRLS Y+D LL YYE HP+ Sbjct: 122 GWYCVPCETFWNEDEVIKEGEERFCPECKRPVKWVEEENYFFRLSKYRDSLLKYYEEHPD 181 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 F+ P RRNE++ ++ GLKDLS++R TF WG+ + DDP++++YVW+DAL NY++ GY Sbjct: 182 FVEPDFRRNEMLKILEGGLKDLSITRTTFKWGVPMKDDPEHVIYVWVDALINYISAIGYG 241 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 N D K+WPADLH+IGK+I RFH+I WPA L+S LPLPKKVF+HG++ G+KISK Sbjct: 242 WN-DEMFNKWWPADLHLIGKEINRFHSIIWPAMLMSVGLPLPKKVFAHGWLTVNGQKISK 300 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGN IDP ++ G D +RY+L+R+I GKDG + ++ L R+N+DLAN GNL+ R Sbjct: 301 SLGNAIDPRFFVKRYGNDVVRYYLIRDIMFGKDGDFSEERLVHRLNSDLANDYGNLLHRI 360 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +MI K ++G +P+P A D + E M + + AL ++ +++V+ Sbjct: 361 TAMIKKYFNGRLPSPSAQEGFDSWLKERFFETKDAYHELMDSYRLTEALDKIWEFIADVN 420 Query: 426 RYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +YF+ KPW L K+ N +R TVLY ++E + ++A++ +P + ++F Sbjct: 421 KYFNDTKPWILGKEGNMERLGTVLYNSLEAVFKVALMTLPVMPDTSEEVF 470 >gi|281413086|ref|YP_003347165.1| methionyl-tRNA synthetase [Thermotoga naphthophila RKU-10] gi|281374189|gb|ADA67751.1| methionyl-tRNA synthetase [Thermotoga naphthophila RKU-10] Length = 629 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 213/470 (45%), Positives = 310/470 (65%), Gaps = 2/470 (0%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I Y N++PHIG AY I+AD++AR+ R G DV F TGTDEHGQK+ +AAQ A Sbjct: 2 KFYITTPIYYVNSEPHIGSAYTTIVADIIARYKRFMGYDVFFLTGTDEHGQKVLQAAQQA 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G + F D+ + F+ + L I+ D FIRTT++ H T + K+ + GD+YKG Y Sbjct: 62 GKDPQEFCDELAEKFKQLWKELKITNDYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYK 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY + E ++N+DEV K + + PV+W+EEE YFFRLS Y+D LL YYE HP+ Sbjct: 122 GWYCVPCETFWNEDEVIKEGEEHFCPECKRPVKWVEEENYFFRLSKYRDPLLKYYEEHPD 181 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 F+ P RRNE++ ++ GLKDLS++R TF WG+ + DDP++++YVW+DAL NY++ GY Sbjct: 182 FVEPDFRRNEMLKILEGGLKDLSITRTTFKWGVPMKDDPEHVIYVWVDALINYISAIGYG 241 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 N D K+WPADLH+IGK+I RFH+I WPA L+S LPLPKKVF+HG++ G+KISK Sbjct: 242 WN-DEMFNKWWPADLHLIGKEINRFHSIIWPAMLMSVGLPLPKKVFAHGWLTVNGQKISK 300 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGN IDP ++ G D +RY+L+R+I GKDG + ++ L R+N+DLAN GNL+ R Sbjct: 301 SLGNAIDPRFFVKRYGNDVVRYYLIRDIMFGKDGDFSEERLVHRLNSDLANDYGNLLHRI 360 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +MI K ++G +P+P A D + E M + + AL ++ +++V+ Sbjct: 361 TAMIKKYFNGRLPSPSAQEGLDSWLKERFFETKDAYHELMDSYRLTEALDKIWEFIADVN 420 Query: 426 RYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +YF+ KPW L K+ N +R TVLY ++E + ++A++ +P + ++F Sbjct: 421 KYFNDTKPWILGKEGNMERLGTVLYNSLEAVFKVALMTLPVMPDTSKEVF 470 >gi|313672884|ref|YP_004050995.1| methionyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] gi|312939640|gb|ADR18832.1| methionyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] Length = 636 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 208/469 (44%), Positives = 308/469 (65%), Gaps = 6/469 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + Y++T I Y N PHIGHAY + ADV++R+ RL G DV F TGTDEHGQKI AA+ Sbjct: 3 KPTFYVTTPIYYVNDVPHIGHAYTTVAADVISRYKRLSGYDVFFLTGTDEHGQKIEMAAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K D+ F+++ L+ISYD FIRTT+ H + + ++KK+ D GDIY+G Sbjct: 63 KQGITPKQLADKVVERFKNLWIKLNISYDKFIRTTDDYHKKSVQYIFKKMMDNGDIYQGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E Y+ + ++ DG + ++E YFF++S YQD LL + E + Sbjct: 123 YEGWYCTPCETYWTETQLL---DGNCCPSCRRETTRLKEPSYFFKMSKYQDALLKHIEEN 179 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNE+ISF+K GL+DLS+SR +F WG+++PDDP++++YVWIDALTNY++ G Sbjct: 180 PDFIKPASRRNEIISFIKEGLRDLSVSRVSFKWGVQVPDDPKHVIYVWIDALTNYISALG 239 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y N D K+WPAD H++GKDILRFH +YWP L+S +PLPK VF+HG+ +G+K+ Sbjct: 240 Y-PNEDDLFGKYWPADFHIVGKDILRFHTVYWPTMLMSIGVPLPKSVFAHGWWTVEGQKM 298 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGN IDP ++++ GVD +RYFL+RE+ G DG + L R+N DL+N +GNL++ Sbjct: 299 SKSLGNAIDPNWLVDKFGVDQIRYFLMREVPFGLDGDFSFKALIHRINGDLSNDLGNLLN 358 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R++ M+ + +DG++ D+ I + +E+ +N+Q+ ++AL + LVS Sbjct: 359 RTLGMLNRYFDGVVQPYVVGDPEDDRIAELIVSTFKEMDKNLQDLAFNKALGTIWELVSA 418 Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 ++++ D PW L K + DR +VLYV ++ IR L+++L F+P A Sbjct: 419 LNKFIDTMAPWNLAKDPSKRDRLGSVLYVVLDGIRALSLMLYPFMPNTA 467 >gi|295694735|ref|YP_003587973.1| methionyl-tRNA synthetase [Bacillus tusciae DSM 2912] gi|295410337|gb|ADG04829.1| methionyl-tRNA synthetase [Bacillus tusciae DSM 2912] Length = 684 Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust. Identities = 227/519 (43%), Positives = 327/519 (63%), Gaps = 21/519 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+ YI+T I YP+ + HIGHAY + AD +AR+ RL G DV++ TGTDEHGQKI + A+ Sbjct: 3 RKTFYITTPIYYPSNKLHIGHAYTTVAADAMARYKRLRGYDVMYLTGTDEHGQKIERRAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + FVD+ +++ LDISYDDFIRTTE RH + +++++ ++GDIY+ Sbjct: 63 EEGKTPQAFVDEIVGWIQELWRKLDISYDDFIRTTEPRHKKAVQRIFQRLMEQGDIYQAD 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + A+G PV+ + E+ YFFR+S Y +LL YYE + Sbjct: 123 YEGLYCTPCESFWT----ARQAEGGRCPDCGRPVELVREKSYFFRMSKYVPQLLRYYEEN 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEFI P R++E+I+ F+K GL+DL +SR TFDWGI +P DP +++YVWIDAL+NY+T Sbjct: 179 PEFIQPESRKHEMINNFIKPGLEDLCVSRTTFDWGIPVPGDPDHVIYVWIDALSNYITAL 238 Query: 243 GYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GYL + + KF WPAD+ V+GK+I+RFH IYWP L++ LPLPKKVF HG++L Sbjct: 239 GYLSDDPAEREKFDRYWPADVQVVGKEIVRFHTIYWPIMLIALGLPLPKKVFGHGWLLTP 298 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GNVIDP +++ G DA+RYFL+REI G DG + + L +R+N DLAN +G Sbjct: 299 QGKMSKSKGNVIDPNLLLDRYGSDAIRYFLLREIPFGADGVFTPEALIQRLNFDLANDLG 358 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL++R++ +I + G IPTP + D + S+ + + + E M+ ALA + Sbjct: 359 NLLNRTLPLIERFAGGRIPTPTMVQDPDGELRSLAAETVSRVEEAMEKMEFSTALAAIWQ 418 Query: 420 LVSEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 L+ ++Y D PW E+K +RA TVLY EVIR ++ILLQ F+ K ++ L Sbjct: 419 LLGRANKYIDETAPWAEMKAGRTERAHTVLYHLAEVIRIVSILLQPFLTKAPVEMQRRLG 478 Query: 479 VA-------DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 ++ D R F + L PG ++K DP+FPR Sbjct: 479 LSPGPHTHWDSARMFGT----LPPGLPVYKG-DPLFPRL 512 >gi|315925586|ref|ZP_07921796.1| methionine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621127|gb|EFV01098.1| methionine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263] Length = 724 Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust. Identities = 216/513 (42%), Positives = 327/513 (63%), Gaps = 8/513 (1%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E++ Y++T I YP+ HIGH Y + AD L RF R G D TG+DEHGQKI K Sbjct: 76 EEKKTFYMTTPIYYPSGDLHIGHTYTTVAADTLTRFKRQQGYDAYMLTGSDEHGQKIQKI 135 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ GVT K +VD +++ +++I Y FIRTT+ H + + ++K++ D+GDIYK Sbjct: 136 AEEKGVTPKAYVDGTVAKIKELWKLMNIDYSQFIRTTDADHVKSVQKIFKRLYDQGDIYK 195 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 G Y GWY DEA++ D +V DG+ + PV+ EE YFFR+S Y D+LL Y E Sbjct: 196 GRYEGWYCTPDEAFWTDTQV---VDGKCPDCGR-PVERASEEAYFFRMSKYADRLLDYIE 251 Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 SHP FI P R+ E+I+ F+K GL+DL +SR +FDWGI + DP +++YVWIDAL+NY+T Sbjct: 252 SHPGFIQPEARQKEMINNFIKPGLQDLCVSRTSFDWGIPVEFDPGHVVYVWIDALSNYIT 311 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GYL++ ++WPADLH++GKDI+RFH IYWP L++ +LPLPK ++ HG+IL KG Sbjct: 312 ALGYLNDKPQLMDRYWPADLHLVGKDIIRFHTIYWPIMLMALDLPLPKTIYGHGWILLKG 371 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKS+GNV+DP+E++++ GVD LRY +++E+ G DG Y +D L +NADLAN +GN Sbjct: 372 GKMSKSIGNVVDPVELVKKYGVDPLRYHVLKEMKYGADGNYSEDLLVGNINADLANDLGN 431 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+SR+V+M +K +DG IP + D+++ V V+Q + M RAL + L Sbjct: 432 LLSRTVAMTVKYFDGTIPEERQSGDHDDALARVAEAVVQNYAKWMDKLDFSRALESIWEL 491 Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 + ++Y D +PW L K + R + VLY E +R + +L+ A +P+ ++KI + + Sbjct: 492 IGRANKYIDETEPWVLGKDDSQKSRLAAVLYNLSEALRIVGVLIAAPMPETSDKILEQMR 551 Query: 479 VADENRCFQSLDQRLK-PGFMLHKTFDPIFPRF 510 + ++ + S+ P + + +P++PR Sbjct: 552 IPEDLATWDSIQHFGSYPSGVQVERCEPLYPRI 584 >gi|222055242|ref|YP_002537604.1| methionyl-tRNA synthetase [Geobacter sp. FRC-32] gi|221564531|gb|ACM20503.1| methionyl-tRNA synthetase [Geobacter sp. FRC-32] Length = 509 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 217/479 (45%), Positives = 313/479 (65%), Gaps = 11/479 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y N PHIGHAY + ADVLAR+ RL G +V F TGTDEHGQK+ KAA AG Sbjct: 5 FYVTTPIYYVNDVPHIGHAYTTLAADVLARYRRLKGYEVFFLTGTDEHGQKVEKAANAAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + D+ + F+ + + LDISY DFIRTT++RH ++K + +KGDIY G Y Sbjct: 65 ETPQELADRVMKRFQALWEKLDISYTDFIRTTQERHKKGVSKIFKDVMEKGDIYLGEYED 124 Query: 127 WYSLRDEAYYNDDEV--YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 WY E ++ + ++ YK D + P + ++EE YFFR+S YQ++LL++ E++P Sbjct: 125 WYCTPCETFWTETQLIDYKCPDC------NRPTEKLKEESYFFRMSKYQEQLLAHIEANP 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RRNE+ISFVK GL+DLS+SR TF WGI +P + ++I+YVW DAL NY+T GY Sbjct: 179 DFIQPKSRRNEIISFVKEGLRDLSVSRTTFSWGIPVPGNDKHIIYVWFDALANYITALGY 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + G+ KFWP D H+IGKDILRFHA+YWP FL++A LPLPKKVF+HG+ +G+K+S Sbjct: 239 PEE-SGNFDKFWPVDAHLIGKDILRFHAVYWPTFLMAAGLPLPKKVFAHGWWTIEGQKMS 297 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSL NV++P ++E+ GVDA+RYFL+RE+ G DG + L R+N+DLAN +GNL++R Sbjct: 298 KSLQNVVEPNMLVEKYGVDAVRYFLLREVPFGLDGDFSHSALVHRINSDLANDLGNLLNR 357 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 S +M+ K + G + P T+ D + +++++ +++ +AL + +VS Sbjct: 358 STAMLNKYFGGTVQAPADLTDMDLAYQEKTREMVRQVDMHLEELAFSKALQAIWEVVSAG 417 Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++Y D PW L K +R +TV+Y +E R + L+ AF+P+ A K L V D Sbjct: 418 NKYIDETAPWTLAKDPVQKERLATVMYCLLESQRIVYQLVSAFMPQTAVKALSYLGVTD 476 >gi|56961843|ref|YP_173565.1| methionyl-tRNA synthetase [Bacillus clausii KSM-K16] gi|56908077|dbj|BAD62604.1| methionyl-tRNA synthetase [Bacillus clausii KSM-K16] Length = 655 Score = 438 bits (1127), Expect = e-121, Method: Compositional matrix adjust. Identities = 217/520 (41%), Positives = 336/520 (64%), Gaps = 20/520 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+ + HIGH Y + D +AR+ RL G DV + TGTDEHGQKI + A+ G Sbjct: 6 FYITTPIYYPSGKLHIGHTYTTVAGDAMARYKRLRGYDVRYLTGTDEHGQKIEQKAKEKG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 ++ + ++ + +++ LDIS+DDFIRTTEKRH + +++++ ++GDIY G Y G Sbjct: 66 ISPLEYTNEMVKPIKELWKKLDISHDDFIRTTEKRHTNMVEKIFEQLVEQGDIYLGEYEG 125 Query: 127 WYSLRDEAYYNDDEVY---KGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQDKLLSY 179 WY + DE +Y + E+ K G + +PV+ + E+ YFFR+S Y D+LL++ Sbjct: 126 WYCVSDETFYGERELVDPIKDESGNIIGGKSPDSGHPVEKVREKSYFFRMSKYADRLLAF 185 Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 YE +P+FI P R+NE+I+ F+K GL+DL++SR +F WG+K+P +P++++YVWIDALTNY Sbjct: 186 YEENPDFIQPASRKNEMINNFIKPGLQDLAVSRTSFTWGVKVPSNPKHVVYVWIDALTNY 245 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 +T GY D K+WPAD+H++GKDILRFH IYWP L++ +LPLPKKVF HG+ L Sbjct: 246 ITALGYGTADDTLYQKYWPADVHLVGKDILRFHTIYWPIMLMALDLPLPKKVFGHGWFLT 305 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K K+SKS GNV+DP +I+ G+DA+RY+L+RE+ G DG + + +RVN DLAN + Sbjct: 306 KDGKMSKSKGNVVDPAPLIDHFGLDAIRYYLLREVPFGADGVFTPEAFVERVNYDLANDL 365 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRAL 414 GNL++R+V+MI K ++G IP A+ +S DE +L + + ++ + M+ AL Sbjct: 366 GNLLNRTVAMINKYFNGEIP---AYVKSASPFDEDLLDLVQATITKVEDAMEEMEFSIAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 A + LVS ++Y D +PW L K +R +V+Y E +R +++L++ F+ + K Sbjct: 423 AAIWQLVSRTNKYIDETQPWMLAKEEDNRELLGSVMYHLAESLRIISVLIRPFMTRTPAK 482 Query: 473 IFDILFVADENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510 I+ L + + ++S+ +L G + K +P+FPR Sbjct: 483 IWAQLGIDESLAGWESIRVFGQLPAGTKVSKG-EPVFPRL 521 >gi|238927712|ref|ZP_04659472.1| methionine--tRNA ligase [Selenomonas flueggei ATCC 43531] gi|238884428|gb|EEQ48066.1| methionine--tRNA ligase [Selenomonas flueggei ATCC 43531] Length = 516 Score = 438 bits (1127), Expect = e-121, Method: Compositional matrix adjust. Identities = 213/475 (44%), Positives = 317/475 (66%), Gaps = 6/475 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + YI+T I YP+A+ HIGHAY +AD +AR+ RL G DV F TG+DEHGQKI + Sbjct: 1 MSGKTPFYITTPIYYPSAKLHIGHAYCTTVADTIARYKRLAGFDVFFLTGSDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ G+T +VD+ +F+++ +L ISYDDFIRTT+ RH++ + ++++I D+GDIY Sbjct: 61 AAEKEGITPIQYVDRIVASFQELWRLLGISYDDFIRTTQPRHYELVQDIFQRIYDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y E+Y+ ++ +G + H PVQ + EE YFFR+S Y D+LL+Y Sbjct: 121 KGEYKGLYCTPCESYWTRLQL--DENGCCPDC-HRPVQEVSEEAYFFRMSKYADRLLAYI 177 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 HP+FI P+ RRNE+I+F++ GL+DL +SR +FDWGI +P DP++++YVW DALTNYLT Sbjct: 178 NEHPDFIQPVSRRNEMIAFIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLT 237 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GYL + + K+WPAD+H++GK+I+RFH I W L++ L LPKKV+ HG+++ G Sbjct: 238 PIGYLHDKEMFH-KYWPADVHLVGKEIVRFHTIIWGCMLMALGLDLPKKVYGHGWLIVNG 296 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKS+GNV+DP+ +IEE G DA+RYFL+REIA G+DG +D L R+N+DLAN +GN Sbjct: 297 AKMSKSVGNVVDPVALIEEFGADAIRYFLLREIALGQDGNISRDALIGRINSDLANDLGN 356 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+ R++SM K G++ T+ D ++ ++ + +++ E M + A+ V +L Sbjct: 357 LLHRTLSMAKKYRKGVVTKGEGRTDFDAALETMTAATVRDYTEQMDAMELSAAVKTVWAL 416 Query: 421 VSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKI 473 +S ++Y D PW L K A VLY VE + +++L+ F+P A +I Sbjct: 417 ISRTNKYIDETAPWTLAKDEAKAAQLDAVLYHLVETLHIVSVLIAPFMPTTARRI 471 >gi|147676404|ref|YP_001210619.1| methionyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] gi|146272501|dbj|BAF58250.1| methionyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] Length = 544 Score = 438 bits (1127), Expect = e-121, Method: Compositional matrix adjust. Identities = 216/509 (42%), Positives = 320/509 (62%), Gaps = 12/509 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+ HIGHAY + AD +ARF ++ G D F TGTDEHGQKI +AA++ G Sbjct: 36 FYITTPIYYPSDNLHIGHAYTTVAADAVARFKKMTGYDTRFLTGTDEHGQKIERAARSRG 95 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + FVD+ + + L++ YDDFIRTTE RH ++K+ ++GDIYK Y G Sbjct: 96 EDPQEFVDKIVAGIKLLWQKLEVDYDDFIRTTEPRHKKVVSAFFQKLYEQGDIYKAGYEG 155 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WY EA++ + + +G PV+ + EE YFFR+S Y ++LL + E HPEF Sbjct: 156 WYCTPCEAFWAESRL----EGGNCPDCGRPVELLREESYFFRMSKYAERLLRHIEEHPEF 211 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P RRNE++SF+KSGL+DL +SR TF+WGI +P DP +++YVW+DALTNY++ GY Sbjct: 212 IQPASRRNEMVSFIKSGLEDLCVSRTTFNWGIPVPFDPGHVIYVWVDALTNYISALGYGT 271 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D K+WPAD+H++GKDI+RFH++ WP L++A L LP++V HG++L + K+SKS Sbjct: 272 EDDSLFKKYWPADVHLMGKDIVRFHSVIWPILLMAAGLELPRQVVGHGWLLLESGKMSKS 331 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNV+DP+ +I++ GVDA+RY+L+RE+ G DG+Y ++ L +R+N DLAN +GNLVSRS+ Sbjct: 332 KGNVVDPLVLIDKYGVDAIRYYLLRELPFGADGYYSEEALVERINKDLANDLGNLVSRSI 391 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +M+ K + G + PG D ++ + + + E M + ALA + LV ++ Sbjct: 392 AMVEKYFQGRVQPPGLPEGPDRELIDLAEQTPAAVEELMDKMDLSGALAAIWRLVGRANK 451 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 Y D PW L K + DR +TV+Y E +R + +++ F+PKL +++ L + ENR Sbjct: 452 YVDETAPWGLAKDPSRADRLATVMYNLAESLRFITVMVSPFMPKLPARVWAQLGL--ENR 509 Query: 485 ----CFQSLDQRLKPGFMLHKTFDPIFPR 509 ++SL P K +FPR Sbjct: 510 PELHTWESLVWGKLPANTCVKRGPALFPR 538 >gi|254797222|ref|YP_003082063.1| methionyl-tRNA synthetase [Neorickettsia risticii str. Illinois] gi|254590469|gb|ACT69831.1| methionyl-tRNA synthetase [Neorickettsia risticii str. Illinois] Length = 521 Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust. Identities = 220/507 (43%), Positives = 318/507 (62%), Gaps = 14/507 (2%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + Y++T + Y N PHIGHAY +IADVL R RL G +V FTTGTDEHGQK+ A+ Sbjct: 20 RYYVTTPVYYVNDNPHIGHAYSSLIADVLTRALRLAGHEVRFTTGTDEHGQKVQNTAKKH 79 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G FVD SR FRD+ + + DFIRTTE RH + + LW IS I G YS Sbjct: 80 GKCEIDFVDHVSRRFRDLCVAMHYEFSDFIRTTETRHKEAVQTLWSTISKNNSISLGEYS 139 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWYS RDEA+Y + E+ G PV W +E YFF+LS + + L Y +P Sbjct: 140 GWYSERDEAFYTEAELQNG-----LAPTGAPVSWTKEACYFFKLSQFSEPLKKLYAENPT 194 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P R NE+++F+ +G+ DLS+SR WGI +PDDP + +YVW+DALTNY+++ GY Sbjct: 195 FIQPKSRFNEMLAFLNTGMHDLSISRTRVKWGINVPDDPAHTVYVWLDALTNYVSSIGYP 254 Query: 246 D-NPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 + + D + FW +H+IGKDILRFH+IYWPAFL++ANL P + +HG+ L+ GEK Sbjct: 255 NTSTDSLFSAFWDNARVIHIIGKDILRFHSIYWPAFLMAANLKTPDVILAHGWWLNDGEK 314 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 ISKSLGN+IDP E+I E GVD +RYFL+REI GKDG + K LK+R+N++LA+ IGNL Sbjct: 315 ISKSLGNIIDPFELISEFGVDPVRYFLIREITVGKDGNFSKVNLKERINSELADNIGNLF 374 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R++++ K + P G ES+ +L + +E + +++ ++ +L ++I L S Sbjct: 375 HRTLTLTAK---LLGPKIGEIYESENELLEFAYSLAKEYKNDIELLDLNSSLDRIIQLSS 431 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + + Y ++PW+LK+ P+ A +L+ +E +R +AI LQ FVP+ A+ + D+L V Sbjct: 432 KANEYISMEEPWKLKE-KPETAGRILHSVLEALRVIAIGLQPFVPQSASTMLDLLAVPPG 490 Query: 483 NRCFQSLDQ--RLKPGFMLHKTFDPIF 507 R ++++ R +PG + P+F Sbjct: 491 ERKLANMNKESRTRPGTQIKLPISPLF 517 >gi|197119575|ref|YP_002140002.1| methionyl-tRNA synthetase [Geobacter bemidjiensis Bem] gi|197088935|gb|ACH40206.1| methionyl-tRNA synthetase [Geobacter bemidjiensis Bem] Length = 509 Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust. Identities = 222/506 (43%), Positives = 325/506 (64%), Gaps = 12/506 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I Y N PHIGHAY + ADVLAR+ RL G DV F TGTDEHGQK+ KAA AG Sbjct: 6 YVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLKGFDVFFLTGTDEHGQKVEKAAIAAGE 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T D+ + F+ + + L+IS DFIRTT++RH +L++++ +KGDIY G Y W Sbjct: 66 TPLELADRVMKRFQSLWEKLEISNTDFIRTTQERHKKGVSVLFERVMEKGDIYLGEYEDW 125 Query: 128 YSLRDEAYYNDDEV--YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 Y E ++ + ++ YK D + P + ++EE YFFR+S YQD+LL++ E++P+ Sbjct: 126 YCTPCETFWTETQLIDYKCPDC------NRPTEKLKEESYFFRMSKYQDQLLAHIEANPD 179 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RRNE+ISFVK GL+DLS+SR TF WGI +P + ++++YVW DALTNY+T GY Sbjct: 180 FIQPKSRRNEIISFVKEGLRDLSVSRTTFQWGIPVPGNDKHVVYVWFDALTNYITALGYP 239 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D G+ K+WP D+H+IGKDILRFH +YWP FL++A LP+PKKVF+HG+ +G+K+SK Sbjct: 240 DE-QGNFGKYWPCDVHLIGKDILRFHTVYWPTFLMAAGLPIPKKVFAHGWWTVEGQKMSK 298 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SL NV++P ++++ GVDA+RYFL+RE+ G DG + L R+N+DLAN +GNL++RS Sbjct: 299 SLQNVVEPNMLVDKYGVDAVRYFLLREVPFGLDGDFSHQALVHRINSDLANDLGNLLNRS 358 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +M+ K + G++ PG T+ D + + ++ ++ +++ RAL + ++S + Sbjct: 359 TAMLGKYFGGVLQAPGEETDLDAAYREKTAAMIGQVDGFIEDLAFSRALQAIWEVISAGN 418 Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +Y D PW L K +R +TV+Y +E R + LL AF+PK + K L Sbjct: 419 KYIDETAPWTLAKDPEKRERLATVMYYMLESQRVVYSLLSAFMPKTSEKGLCCLGWPQAP 478 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPR 509 LKPG + K + +FPR Sbjct: 479 DAGDLAWGGLKPGTPIAKA-EALFPR 503 >gi|224475632|ref|YP_002633238.1| methionyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] gi|222420239|emb|CAL27053.1| Methionyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] Length = 667 Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust. Identities = 224/522 (42%), Positives = 332/522 (63%), Gaps = 16/522 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + A Sbjct: 3 KDTFYITTPIYYPSGKLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAH 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AGV+ ++D+ + + + L+IS DDFIRTTEKRH + +++++ ++GDIY G Sbjct: 63 KAGVSELEYLDEMISGIKSLWEKLEISNDDFIRTTEKRHEEVVAKVFERLLEQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDE----VY----KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175 Y GWYS+ DE YY + + VY K G+ ++ H V+ ++EE YFF +S Y D+ Sbjct: 123 YEGWYSVPDETYYTESQLEEPVYDDNGKIIGGKSPDSGHE-VELVKEESYFFNISKYADR 181 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 LL++Y+ HPEFI P R+NE+I+ F+K GL DL++SR TFDWG+++P +P++++YVWIDA Sbjct: 182 LLAFYDEHPEFIQPPSRKNEMINNFIKPGLTDLAVSRTTFDWGVQVPSNPKHVVYVWIDA 241 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L NY++ GYL D K+WPADLH++ K+I+RFH+I WP L++ +LPLPK+VF+HG Sbjct: 242 LVNYISALGYLSEDDSLFKKYWPADLHLMAKEIVRFHSIVWPILLMALDLPLPKRVFAHG 301 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + R N DL Sbjct: 302 WILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVDRTNFDL 361 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNLV+R+++MI K +DG +P G E D + ++E ENM+N A Sbjct: 362 ANDLGNLVNRTIAMINKYFDGELPAYEGPKHELDAEMEQFALDTVKEYHENMENLQFSVA 421 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L+ V +S ++Y D PW L K + + V+ VE IR +LL+ F+ Sbjct: 422 LSTVWKFISRTNKYIDETTPWVLAKDDSQKEMLGNVMAHLVENIRFATVLLRPFITHAPR 481 Query: 472 KIFDILFV-ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +IF+ L + + E F SL++ LK + + PIFPR Sbjct: 482 QIFEQLNINSPELFGFDSLNEYGALKAPISVTEKPQPIFPRL 523 >gi|220932862|ref|YP_002509770.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168] gi|219994172|gb|ACL70775.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168] Length = 653 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 223/511 (43%), Positives = 323/511 (63%), Gaps = 13/511 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I YP+ + HIGHAY + AD LA+F + D +F TG+DEHGQKI + A AG Sbjct: 6 FYVTTPIYYPSDRLHIGHAYTTVAADTLAKFKEMQDYDTMFLTGSDEHGQKIERKASEAG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +VD+ F+D+ L + YD FIRTT H + ++KKI +KGDIYKG Y G Sbjct: 66 KKPGEYVDEIVATFKDLWKRLGVDYDYFIRTTNPDHEKVVQEIFKKIYEKGDIYKGKYEG 125 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 WY E ++ + ++ +G+ PV+W+EEE YFF+LS Y D+LL + + HPE Sbjct: 126 WYCTPCETFWTERQL----EGEKVCPDCGRPVEWVEEESYFFKLSKYADRLLEHIKKHPE 181 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RR E+I+F++SGL+DLS+SR TFDWGI +P D +++YVW DAL+NY++ GYL Sbjct: 182 FIQPESRRKEMINFIESGLEDLSVSRTTFDWGIPVPIDDDHVIYVWFDALSNYISAIGYL 241 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + D +WPAD+H++GKDILRFH I WP L++ +LPLPKKVF HG++L + K+SK Sbjct: 242 SD-DKKFNHYWPADVHIVGKDILRFHTIIWPIILMALDLPLPKKVFGHGWLLTETGKMSK 300 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S GNV+DP ++I++ GVD +RY+L+RE+A G+DG Y + L KR+N+DLAN +GNL+ R+ Sbjct: 301 SKGNVVDPNKLIDDFGVDPIRYYLLREVAFGQDGTYSTEALIKRINSDLANDLGNLLHRT 360 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 V+M+ K +DG+IP PG E D+ + + + L EI +M N AL + + + + Sbjct: 361 VTMVDKYFDGVIPEPGVEKEVDKDLKNYALKTLDEIDNSMDNLKYAVALESLWNFIRRSN 420 Query: 426 RYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-- 481 +Y D PW L + DR TVLY +E +R +A +L+ F+ + I + + D Sbjct: 421 KYIDQTTPWILARDEDKKDRLGTVLYNLIEALRIIAGMLKPFLVETPYMIGEQINARDLI 480 Query: 482 ENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 E + L Q L PG + K PI+PR Sbjct: 481 EKASWSDLKQWGLLSPGRKVKKG-KPIYPRI 510 >gi|114776564|ref|ZP_01451609.1| methionyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] gi|114553394|gb|EAU55792.1| methionyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] Length = 512 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 218/517 (42%), Positives = 325/517 (62%), Gaps = 18/517 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E Y++T I Y N +PH+GH Y I ADVLAR+ R+ G DV F TG DEHGQK+ +AA+ Sbjct: 2 ESYYVTTPIYYVNDEPHLGHIYTTIAADVLARYQRMAGRDVFFLTGVDEHGQKVQQAAEA 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ DQ ++ + L I+ DDFIRT+ RH + +W+++ + G IYKG Y Sbjct: 62 RGIEPIELADQVVERYQSLWPELAITNDDFIRTSSDRHRRGVQAMWRRLENAGAIYKGFY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSY 179 WY + E Y+ + ++ D + +H P V+ ++EE YFFRLSAYQD+LL Y Sbjct: 122 EDWYCVPCETYWTETQL---NDADCWEEKHCPDCKRAVEKVQEESYFFRLSAYQDRLLEY 178 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 ++P+FI P RRNEV+ FV+SGL DLS+SR TF WG+ +P D ++++YVWIDALTNYL Sbjct: 179 INANPDFIGPASRRNEVLRFVESGLNDLSVSRTTFSWGVPVPGDEKHVIYVWIDALTNYL 238 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 + G+ PD K+WPAD+H+IGKDILRFHAIYWP L++A+LPLP+++F+HG+ + Sbjct: 239 SALGF---PDQELPKYWPADVHLIGKDILRFHAIYWPCMLMAADLPLPQRLFAHGWWTVE 295 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 GEK+SKS GN + P +++E+ D +RYFL+RE+ G+DG + +K+R N+DLAN +G Sbjct: 296 GEKMSKSKGNALRPADLLEQYDADVIRYFLLREVPFGQDGDFSFSAMKQRYNSDLANDVG 355 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL++RS++M+ K DG++ PG D ++++ + +++ +M Q H AL ++ Sbjct: 356 NLLNRSLAMLNKYRDGVLAEPGDEQAVDRTLIADVEGMQRDVAAHMNKQAFHLALERISV 415 Query: 420 LVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 +V +RY + PW L K + R +TVLY E +R +A+ L F+P + + + + Sbjct: 416 VVRHGNRYVEENAPWSLAKAGDEARLNTVLYHLAETLRLVALQLMPFMPGKMSAMLNQIQ 475 Query: 479 VAD---ENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510 A+ + F S LKPG K P+FPR Sbjct: 476 GAELMSQTLTFASHGGWGLLKPGHQCEKP-QPLFPRM 511 >gi|295105205|emb|CBL02749.1| methionyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3] Length = 665 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 214/515 (41%), Positives = 320/515 (62%), Gaps = 15/515 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E + YI+T I YP+ + HIGH+Y + D LARF R+ G DV+F TGTDEHGQKI Sbjct: 1 MSEHKTFYITTPIYYPSDKLHIGHSYTTVACDALARFKRMQGYDVMFLTGTDEHGQKIQD 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A +AGVT K +VD+ +D+ +LD+SYD FIRTT+ H ++C+ ++ K+ ++GDIY Sbjct: 61 KAADAGVTPKEYVDKIVATVKDLWKLLDVSYDRFIRTTDDYHMESCQKIFTKLYEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 KG Y G Y E+++ D ++ G + Y+A EE YFF+ S Y D+L Sbjct: 121 KGEYIGHYCKPCESFWTDSQLVDGKCPDCGREVYDAH--------EEAYFFKTSKYADRL 172 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 L YE +P+FI P R+NE+I+F+K GL+D +SR + WGI +P DP++ MYVW+DAL+ Sbjct: 173 LKLYEENPQFIQPESRKNEMIAFIKQGLQDTCVSRTSVKWGIPVPFDPKHTMYVWVDALS 232 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NY++ GY + KFWPADLH++GK+ILRFH I WPA L++ +LPLPK+VF HG++ Sbjct: 233 NYISALGYGNETYHDYDKFWPADLHMVGKEILRFHTILWPAMLMALDLPLPKRVFGHGWL 292 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L G K+SKS+GNV+DP+ + + GVDA+RYFL+REI G DG + + L R+N+DLAN Sbjct: 293 LMNGGKMSKSVGNVVDPVILCDRYGVDAIRYFLLREIPFGNDGMFTNEALINRINSDLAN 352 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNL+SR+V+M K + G + D + ++ + + ++ +M + I +AL + Sbjct: 353 DLGNLLSRTVAMCEKYFGGTVHNVAGTEAIDTELETMVNELTAKVTADMDDLTIPQALME 412 Query: 417 VISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + +++ ++Y D PW L K N R +VLY E +R ILL A++P A K+ Sbjct: 413 IFAVIQRANKYIDETAPWALAKDEANKQRLESVLYHLCEALRVCGILLNAYLPTTAPKMM 472 Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 + L + + + +HK + +FPR Sbjct: 473 EQLGLDASALDLTKTTYGAQQTYTVHKG-EALFPR 506 >gi|160943218|ref|ZP_02090454.1| hypothetical protein FAEPRAM212_00704 [Faecalibacterium prausnitzii M21/2] gi|158445457|gb|EDP22460.1| hypothetical protein FAEPRAM212_00704 [Faecalibacterium prausnitzii M21/2] Length = 665 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 214/515 (41%), Positives = 320/515 (62%), Gaps = 15/515 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E + YI+T I YP+ + HIGH+Y + D LARF R+ G DV+F TGTDEHGQKI Sbjct: 1 MSEHKTFYITTPIYYPSDKLHIGHSYTTVACDALARFKRMQGYDVMFLTGTDEHGQKIQD 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A +AGVT K +VD+ +D+ +LD+SYD FIRTT+ H ++C+ ++ K+ ++GDIY Sbjct: 61 KAADAGVTPKEYVDKIVATVKDLWKLLDVSYDRFIRTTDDYHMESCQKIFTKLYEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 KG Y G Y E+++ D ++ G + Y+A EE YFF+ S Y D+L Sbjct: 121 KGEYIGHYCKPCESFWTDSQLVDGKCPDCGREVYDAH--------EEAYFFKTSKYADRL 172 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 L YE +P+FI P R+NE+I+F+K GL+D +SR + WGI +P DP++ MYVW+DAL+ Sbjct: 173 LKLYEENPQFIQPESRKNEMIAFIKQGLQDTCVSRTSVKWGIPVPFDPKHTMYVWVDALS 232 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NY++ GY + KFWPADLH++GK+ILRFH I WPA L++ +LPLPK+VF HG++ Sbjct: 233 NYISALGYGNETYHDYDKFWPADLHMVGKEILRFHTILWPAMLMALDLPLPKRVFGHGWL 292 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L G K+SKS+GNV+DP+ + + GVDA+RYFL+REI G DG + + L R+N+DLAN Sbjct: 293 LMNGGKMSKSVGNVVDPVILCDRYGVDAIRYFLLREIPFGNDGMFTNEALINRINSDLAN 352 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNL+SR+V+M K + G + D + ++ + + ++ +M + I +AL + Sbjct: 353 DLGNLLSRTVAMCEKYFGGTVHNVAGTEAIDTELETMVNELTAKVTADMDDLTIPQALME 412 Query: 417 VISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + +++ ++Y D PW L K N R +VLY E +R ILL A++P A K+ Sbjct: 413 IFAVIQRANKYIDETAPWALAKDEANKQRLESVLYHLCEALRVCGILLNAYLPTTAPKMM 472 Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 + L + + + +HK + +FPR Sbjct: 473 EQLGLDASALDLTKTTYGAQQTYTVHKG-EALFPR 506 >gi|323490978|ref|ZP_08096172.1| methionyl-tRNA synthetase [Planococcus donghaensis MPA1U2] gi|323395334|gb|EGA88186.1| methionyl-tRNA synthetase [Planococcus donghaensis MPA1U2] Length = 652 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 217/510 (42%), Positives = 323/510 (63%), Gaps = 10/510 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+ + HIG AY + +D +AR+ RL G DV F TG DEHGQKI + A AG Sbjct: 8 FYITTPIYYPSGKFHIGTAYTTVASDAMARYKRLRGFDVRFLTGMDEHGQKIEEKANEAG 67 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + FVD+ + + + V+DI+YDDFIRTTE+RH + ++K D GDIYKG Y G Sbjct: 68 KAPQEFVDEMAAAAKQVWSVMDITYDDFIRTTEERHKEGVERIFKTFLDNGDIYKGEYEG 127 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WY E+++ ++++ G PVQ ++EE YFF + Y +LL YYE++ EF Sbjct: 128 WYCTPCESFFTENQLENGNCPDC----GRPVQKVKEESYFFNMKKYASRLLEYYENNVEF 183 Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 I P R+NE+I+ F+K GL+DLS+SR +FDWGI +P DP++++YVW+DAL+NY+T+ GY Sbjct: 184 IEPESRKNEMINNFIKPGLEDLSVSRTSFDWGIPVPGDPKHVIYVWVDALSNYITSLGYG 243 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKKVF+HGFI+ K K+SK Sbjct: 244 SEDDSLFDKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKVFAHGFIMMKDGKMSK 303 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S GNV+ P ++E G+DA RYFL+RE+ G DG + + +R N DLAN +GNL++R+ Sbjct: 304 SKGNVVYPEMLVERYGLDATRYFLLRELPFGSDGVFSPESFIERTNFDLANDLGNLLNRT 363 Query: 366 VSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 VSMI K G++P TE D + V ++ ++ + M+ L+++ +L+S Sbjct: 364 VSMINKYCGGVVPQINDLQTEFDAPLQQVAAQTVKAHEQYMEKMQFSIVLSEIWTLISRT 423 Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++Y D +PW L K ++ ++V+ E +R A++LQ F+P +I + L + +E Sbjct: 424 NKYIDETQPWVLAKDENAKEQLNSVMAHLAESLRMTAVMLQPFLPNAPKQIIEQLGLTEE 483 Query: 483 NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510 + +L ++ G + PIFPR Sbjct: 484 FLAWATLQDFAKIPAGTQVVSKGTPIFPRL 513 >gi|317120932|ref|YP_004100935.1| methionyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] gi|315590912|gb|ADU50208.1| methionyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] Length = 677 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 226/514 (43%), Positives = 312/514 (60%), Gaps = 14/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R + YI+T I YPN + HIGH Y + AD LAR+HRL G D F TGTDEHGQKI +AA+ Sbjct: 8 RGRFYITTPIYYPNDRLHIGHTYTTVAADALARYHRLRGDDTWFLTGTDEHGQKIERAAR 67 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG ++D + + L ISYDDFIRT+E RH + +++++ ++GDIYKG Sbjct: 68 KAGKEPLEYIDPIVEATKQLWHRLHISYDDFIRTSEPRHEQRVQQIFQRLYEQGDIYKGV 127 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y EAYY + E+ DGQ PV+ ++EE YFFRLS Y LL + E + Sbjct: 128 YEGLYCTACEAYYTEAELL---DGQRCPVHETPVERLQEESYFFRLSKYAQPLLEHIERN 184 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 PEFI P RRNEV++F++ GL+DLS+SR +F WGI +P DP +++YVWIDAL NY+T G Sbjct: 185 PEFIQPPSRRNEVVAFIRQGLQDLSVSRTSFRWGIPVPFDPDHVIYVWIDALANYITALG 244 Query: 244 YLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 + PDG + +FWPADLH+IGKDILRFHAI WPA L++ PLP+ V+ HG++L G K Sbjct: 245 W---PDGERYRRFWPADLHLIGKDILRFHAIIWPALLMALGEPLPRCVYGHGWLLIDGGK 301 Query: 303 ISKSL--GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 I KS G VIDP+++IE+ GVD +RYFL+RE+ G DG Y +D L +R+N DLAN +GN Sbjct: 302 IGKSRAGGQVIDPVQLIEKYGVDPVRYFLLREVPFGDDGSYSEDALVRRLNTDLANDLGN 361 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L R+ MI + DG IP P SD + + + + M + AL + L Sbjct: 362 LAWRTTGMIQRFLDGRIPEPPG-AASDGVLAAAARETVARVERAMAGFDLPAALQAIWDL 420 Query: 421 VSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + ++Y D Q PW L++ DR VLY E R + +LL F+ + +++ L + Sbjct: 421 IGRANKYIDEQAPWALRREGRRDRLEAVLYDVAETARVVGVLLSPFLVETPPRLWTQLGL 480 Query: 480 ADENRCF---QSLDQRLKPGFMLHKTFDPIFPRF 510 + R + L+ PG + P+FPR Sbjct: 481 GPDYRPAGWREGLEWGQLPGGVRVVRDQPLFPRI 514 >gi|99034647|ref|ZP_01314595.1| hypothetical protein Wendoof_01000592 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 471 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 218/474 (45%), Positives = 303/474 (63%), Gaps = 39/474 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M++ E YI+T + Y N +PHIGHAY ++ DV+ARF +L G +V FTTGTDEHGQKI K Sbjct: 1 MEQFENFYITTPVYYVNDKPHIGHAYTSLLCDVVARFMKLAGKNVKFTTGTDEHGQKIEK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ + K F D+ S +F+++A ++ YDDFIRTTE+RH LW ++ ++G IY Sbjct: 61 AAKAKEMQPKEFTDEVSVSFKELAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 YSGWYS+RDEA+Y + E+ DG+ VQW++EE YFFRLS +Q+KLL Y Sbjct: 121 LDSYSGWYSVRDEAFYQESEL---IDGKAPTGAE--VQWIKEESYFFRLSNWQEKLLELY 175 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 ++ P FI P RRNEVISFV+SGL DLS+SR +F+WGIK+P + ++++YVWIDALTNYLT Sbjct: 176 KNQPSFIFPESRRNEVISFVRSGLIDLSISRTSFNWGIKVPGNDKHVIYVWIDALTNYLT 235 Query: 241 TTGYLDNPDGSKAKFWPA----------------------------------DLHVIGKD 266 + G+ +FW ++HVIGKD Sbjct: 236 SIGFPSTEGEEYKRFWAEPETQIPVSSTGMTPNQGKTQIPVSSAANLADNSFNVHVIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 ILRFHA+YWPA LL+A+LPLPK++ HG+ L++GEKISKSLGNVIDPI + +E GVD LR Sbjct: 296 ILRFHAVYWPAILLAADLPLPKQIAVHGWWLNEGEKISKSLGNVIDPIGLAQEFGVDQLR 355 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 YFL+RE + G+DG + K + R+N++LAN IGNLV R++S + K G++PT Sbjct: 356 YFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQRTISFLHKQCSGIVPTIDQSLLK 415 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 E L C +L ++ ++ + + +I++ SE + Y D PW L KT+ Sbjct: 416 GEESLPGCKAILDQVMNHLSKYEFNHIILLIINISSEANAYIDKSAPWTLSKTD 469 >gi|313115100|ref|ZP_07800588.1| methionyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] gi|310622577|gb|EFQ06044.1| methionyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] Length = 665 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 214/515 (41%), Positives = 320/515 (62%), Gaps = 15/515 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E + YI+T I YP+ + HIGH+Y + D LARF R+ G DV+F TGTDEHGQKI Sbjct: 1 MSEHKTFYITTPIYYPSDKLHIGHSYTTVACDALARFKRMQGYDVMFLTGTDEHGQKIQD 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A +AGVT K +VD+ +D+ +LD+SYD FIRTT+ H ++C+ ++ K+ ++GDIY Sbjct: 61 KAADAGVTPKEYVDKIVATVKDLWKLLDVSYDRFIRTTDDYHMESCQKIFTKLYEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 KG Y G Y E+++ D ++ G + Y+A EE YFF+ S Y D+L Sbjct: 121 KGEYIGHYCKPCESFWTDSQLVDGKCPDCGREVYDAH--------EEAYFFKTSKYADRL 172 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 L YE +P+FI P R+NE+I+F+K GL+D +SR + WGI +P DP++ MYVW+DAL+ Sbjct: 173 LKLYEENPQFIQPESRKNEMIAFIKQGLQDTCVSRTSVKWGIPVPFDPKHTMYVWVDALS 232 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NY++ GY + KFWPADLH++GK+ILRFH I WPA L++ +LPLPK+VF HG++ Sbjct: 233 NYISALGYGNEKYHDYDKFWPADLHMVGKEILRFHTILWPAMLMALDLPLPKRVFGHGWL 292 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L G K+SKS+GNV+DP+ + + GVDA+RYFL+REI G DG + + L R+N+DLAN Sbjct: 293 LMNGGKMSKSVGNVVDPVILCDRYGVDAIRYFLLREIPFGNDGMFTNEALITRINSDLAN 352 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNL+SR+V+M K + G + D + ++ + + ++ +M + I +AL + Sbjct: 353 DLGNLLSRTVAMCEKYFGGTVHNVAGTEAIDTELETMVNELTAKVTADMDSLTIPQALME 412 Query: 417 VISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + +++ ++Y D PW L K N R +VLY E +R ILL A++P A K+ Sbjct: 413 IFAVIQRANKYIDETAPWALAKDEANKARLESVLYHLCEALRVCGILLNAYLPTTAPKMM 472 Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 + L + + + +HK + +FPR Sbjct: 473 EQLGLDASALDLTKTTYGAQETYTVHKG-EALFPR 506 >gi|281419111|ref|ZP_06250128.1| methionyl-tRNA synthetase [Clostridium thermocellum JW20] gi|281407260|gb|EFB37521.1| methionyl-tRNA synthetase [Clostridium thermocellum JW20] Length = 654 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 215/513 (41%), Positives = 328/513 (63%), Gaps = 9/513 (1%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +R+ YI+T I YP+ + HIGH+Y + AD +AR+ RL G DV+F TGTDEHGQKI + A Sbjct: 2 DRKTFYITTPIYYPSDKLHIGHSYTTVAADAVARYKRLKGYDVMFLTGTDEHGQKIERKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + GVT K +VD+ +++ +L I+ D FIRTT+ H T + ++KK+ D+GDIYK Sbjct: 62 KEKGVTPKQYVDEIVAGIKELWKLLKITNDRFIRTTDPHHEKTVQKIFKKLYDQGDIYKS 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E+++ ++ DG+ + V+ +EE YFFRLS YQD+L+ + E Sbjct: 122 EYEGWYCTPCESFWTKTQL---VDGKCPDCGRE-VELTKEESYFFRLSKYQDRLIKHIEE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +P+FI P+ R+NE+++ F++ GL+DL +SR TFDWGI + D ++++YVWIDAL+NY+T Sbjct: 178 NPDFIQPVSRQNEMLNNFLRPGLEDLCVSRTTFDWGIPVSFDDKHVVYVWIDALSNYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 Y+ D K+WPAD+H++GK+I+RFH I WPA L++ PLPK+VF HG++L +G Sbjct: 238 LNYMSEDDSDYRKYWPADVHLVGKEIVRFHTIIWPAMLMALGEPLPKQVFGHGWLLLEGG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ ++E+ GVDA+RYFL+RE+ G DG + + L R+N+DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVVLVEKYGVDAIRYFLLREVPFGSDGVFSNEALINRINSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 VSR+V+MI K + G +P E D+ ++ + Q++ E + AL ++ + Sbjct: 358 VSRTVAMIDKYFGGKLPQERQAGEFDDDLIKTVTDTPQKVEELLDRLQFSTALTEIWKAI 417 Query: 422 SEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S ++Y D PW L K+ N R + VLY E IR ++IL+Q F+P+ KI+ L + Sbjct: 418 SRTNKYIDETMPWALAKSEENKARLAAVLYNLAESIRIVSILIQPFMPETPEKIWHQLGI 477 Query: 480 ADENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510 D+ ++ + P +P+FPR Sbjct: 478 NDKKYVEWETAKKWGVYPEGAAVNKGEPLFPRI 510 >gi|168187465|ref|ZP_02622100.1| methionyl-tRNA synthetase [Clostridium botulinum C str. Eklund] gi|169294617|gb|EDS76750.1| methionyl-tRNA synthetase [Clostridium botulinum C str. Eklund] Length = 646 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 210/470 (44%), Positives = 315/470 (67%), Gaps = 7/470 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+A+ HIG+ Y I AD +ARF RL G D F TGTDEHGQKI + A+ G Sbjct: 6 FYITTPIYYPSAKLHIGNTYTTIAADAIARFKRLTGYDTYFLTGTDEHGQKIQRLAEGKG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T K +VD+ + +D+ ++++SYD FIRTT+ H +T + ++KK+ D+GDIYKG Y G Sbjct: 66 ITPKAYVDEIVADIKDLWKIMNVSYDKFIRTTDDYHIETVQKIFKKLYDQGDIYKGEYEG 125 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y E+++ + ++ DG+ + PV+ +EE YFF++S Y D+L+ Y ESHP+F Sbjct: 126 LYCTPCESFWTETQL---VDGKCPDCGR-PVEKTKEEAYFFKMSKYADRLIEYIESHPDF 181 Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 I P R+NE+++ F++ GL+DL +SR +FDWGI + D ++++YVWIDAL+NY+T GY Sbjct: 182 IQPESRKNEMLNNFLRPGLQDLCISRTSFDWGIPVSFDEKHVIYVWIDALSNYITALGYD 241 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D K+WPA++H++GKDILRFH IYWP L++ +LPLPK+VF HG++L G K+SK Sbjct: 242 QENDELYQKYWPANVHLVGKDILRFHTIYWPIMLIALDLPLPKQVFGHGWLLVDGGKMSK 301 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S GNV+DP+ ++ E G D +RY+L+ EI G+DG Y + K+ N+DLAN +GNLV+R+ Sbjct: 302 SKGNVVDPVTLVNEFGTDPVRYYLLHEIPFGQDGMYTGETFIKKTNSDLANDLGNLVNRT 361 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 ++MI K +DG+IP P A + D ++ V +++ M I AL ++ +LV + Sbjct: 362 IAMINKYFDGVIPAPKAEEDIDNDLIRVALEAPKKVEGKMDALKIPEALDEIWTLVRRSN 421 Query: 426 RYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +Y D PW L K +R TVLY VE +R ++++L AF+P+ + KI Sbjct: 422 KYIDETMPWALAKEEDKRERLGTVLYNLVEGLRIVSVMLSAFLPETSKKI 471 >gi|125974586|ref|YP_001038496.1| methionyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|256004052|ref|ZP_05429037.1| methionyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|125714811|gb|ABN53303.1| methionyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|255991975|gb|EEU02072.1| methionyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|316941704|gb|ADU75738.1| methionyl-tRNA synthetase [Clostridium thermocellum DSM 1313] Length = 654 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 215/513 (41%), Positives = 328/513 (63%), Gaps = 9/513 (1%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +R+ YI+T I YP+ + HIGH+Y + AD +AR+ RL G DV+F TGTDEHGQKI + A Sbjct: 2 DRKTFYITTPIYYPSDKLHIGHSYTTVAADAVARYKRLKGYDVMFLTGTDEHGQKIERKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + GVT K +VD+ +++ +L I+ D FIRTT+ H T + ++KK+ D+GDIYK Sbjct: 62 KEKGVTPKQYVDEIVAGIKELWKLLKITNDRFIRTTDPHHEKTVQKIFKKLYDQGDIYKS 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E+++ ++ DG+ + V+ +EE YFFRLS YQD+L+ + E Sbjct: 122 EYEGWYCTPCESFWTKTQL---VDGKCPDCGRE-VELTKEESYFFRLSKYQDRLIKHIEE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +P+FI P+ R+NE+++ F++ GL+DL +SR TFDWGI + D ++++YVWIDAL+NY+T Sbjct: 178 NPDFIQPVSRQNEMLNNFLRPGLEDLCVSRTTFDWGIPVSFDDKHVVYVWIDALSNYITA 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 Y+ D K+WPAD+H++GK+I+RFH I WPA L++ PLPK+VF HG++L +G Sbjct: 238 LNYMSEDDSDYRKYWPADVHLVGKEIVRFHTIIWPAMLMALGEPLPKQVFGHGWLLLEGG 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ ++E+ GVDA+RYFL+RE+ G DG + + L R+N+DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVVLVEKYGVDAIRYFLLREVPFGSDGVFSNEALINRINSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 VSR+V+MI K + G +P E D+ ++ + Q++ E + AL ++ + Sbjct: 358 VSRTVAMIDKYFGGKLPQERQAGEFDDDLIKTVTDTPQKVEELLDRLQFSTALTEIWKAI 417 Query: 422 SEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S ++Y D PW L K+ N R + VLY E IR ++IL+Q F+P+ KI+ L + Sbjct: 418 SRTNKYIDETMPWALAKSEENKARLAAVLYNLAESIRIVSILIQPFMPETPEKIWHQLGI 477 Query: 480 ADENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510 D+ ++ + P +P+FPR Sbjct: 478 NDKKYVEWETAKKWGVYPEGAAVNKGEPLFPRI 510 >gi|262277217|ref|ZP_06055010.1| methionyl-tRNA synthetase [alpha proteobacterium HIMB114] gi|262224320|gb|EEY74779.1| methionyl-tRNA synthetase [alpha proteobacterium HIMB114] Length = 500 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 214/507 (42%), Positives = 327/507 (64%), Gaps = 10/507 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++K YI+T I YP+A+PH+GHAY I +DV+ARF R+DG DV F TGTDEHG KI +AA+ Sbjct: 3 KKKFYITTPIYYPSAKPHMGHAYSSIASDVIARFKRIDGCDVSFLTGTDEHGLKIQRAAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 F D+ S+ F D+++ L++S DFIRTTE+RH +T + LW + + +Y Sbjct: 63 EHNSDPLSFCDKISQTFIDLSNTLNLSNTDFIRTTEERHKNTVKKLWSLLQENDQLYLSK 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+GWYS+ DEAYY ++EV + + + + V WMEEE +FF+LS +Q LL +Y+++ Sbjct: 123 YAGWYSVSDEAYYLENEVEEIDGKKISKSSGSEVTWMEEESFFFKLSEWQQPLLDFYKNN 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI P R+NEVISF+ GLKDLS+SR TFDWGI +P++ +++MYVW+DALTNYL+ T Sbjct: 183 PNFIQPESRKNEVISFISGGLKDLSVSRTTFDWGIDVPNNKKHVMYVWLDALTNYLSATN 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y DN +G FWPAD+H+IGKDILRFHA+YWPAFL++A LP+PK++F HG+IL EK+ Sbjct: 243 YFDNHNG----FWPADVHIIGKDILRFHAVYWPAFLMAAKLPVPKQIFGHGWILSGEEKM 298 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GN++DP+E+I + G D +RY+L++++ G DG + D L+ +N DLAN IGNL + Sbjct: 299 SKSKGNILDPLELINQYGSDEIRYYLMKDVIFGLDGKINIDNLRITLN-DLANNIGNLSN 357 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R +++ K+Y+ +P + +L ++Q I + +H + S S Sbjct: 358 RIFTILNKNYECKVPQINDGYTINSDLLVDKKTIIQFIDK----YELHNYTKFIHSYSST 413 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +++Y + +PW K + +L+ T+ ++ + ILL +P + K L + + Sbjct: 414 INKYVNDNEPWNKKNNSEQNIKNILFSTLVALKNIFILLYPVMPLASIKFLKSLNINENQ 473 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510 +++++L L K D +F ++ Sbjct: 474 IKIDNINEKLTINDQLTKP-DILFKKY 499 >gi|330838376|ref|YP_004412956.1| Methionyl-tRNA synthetase [Selenomonas sputigena ATCC 35185] gi|329746140|gb|AEB99496.1| Methionyl-tRNA synthetase [Selenomonas sputigena ATCC 35185] Length = 655 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 216/513 (42%), Positives = 330/513 (64%), Gaps = 11/513 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+ YI+T I YP+A+ HIGHAY IAD +ARF RL DV F TG+DEHGQKI + A+ Sbjct: 3 RKSFYITTPIYYPSAKLHIGHAYCTTIADAVARFKRLTDHDVFFLTGSDEHGQKIQQKAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT +VD+ F+ + L IS DDFIRTTE+RH + ++++I +KGDIYKG Sbjct: 63 EEGVTPIAYVDKIVAGFQGLWQKLHISNDDFIRTTEERHQRVVQEVFRRIYEKGDIYKGK 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+Y+ + ++ ADG+ + V +EE+ YFF++S Y D++L+Y E + Sbjct: 123 YKGLYCTPCESYWTERQL---ADGKCPDCGRE-VAEVEEDAYFFKMSHYADRVLAYIEEN 178 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P+ RRNE+I+F+K GL+DL +SR +FDWGI +P P +++YVW DALTNYLT G Sbjct: 179 PDFIQPVSRRNEMINFIKQGLEDLCISRTSFDWGIPVPIAPDHVIYVWFDALTNYLTPIG 238 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 +LD+P+ + K+WPAD+H++GK+I+RFH+I WP L++ +LPLPK V+ HG+++ G+K+ Sbjct: 239 FLDDPEKFE-KYWPADVHLVGKEIVRFHSIIWPCILMALDLPLPKMVYGHGWLIVDGDKM 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP+++I+E G DA+RYFL+REI G+DG + +D L R+NADLAN +GNL+ Sbjct: 298 SKSKGNVVDPVQLIDEFGADAIRYFLLREINLGQDGNFSRDALITRINADLANDLGNLLH 357 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+++MI K DG++ +E D + L+ + M+ + A+ + +S Sbjct: 358 RTLNMIGKFQDGVVEEARGESEIDRAFLADAESAIAAYEREMEEMKLQSAIKTTWAFISR 417 Query: 424 VDRYFDAQKPW---ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++Y D PW + + LY E +R++++L++ F+P+ A KI+ L + Sbjct: 418 ANKYIDETMPWALAKDAAAKKQELTNTLYNLAESLRRISVLIEPFMPETAAKIWHQLGME 477 Query: 481 DENRCFQSLDQRLKPGFMLHK---TFDPIFPRF 510 + + D R GF+ + + +FPR Sbjct: 478 GDFSRVRFADVRTWGGFLAGTHVGSPEQLFPRI 510 >gi|322804348|emb|CBZ01898.1| methionyl-tRNA synthetase [Clostridium botulinum H04402 065] Length = 645 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 208/469 (44%), Positives = 313/469 (66%), Gaps = 7/469 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I YP+A+ HIG+ Y + AD LARF RL G DV+F TGTDEHGQKI + A+ V Sbjct: 7 YVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEAKKV 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T KV+VD+ +++ +++I YD FIRTT++ H + + ++K + DKGDIYK YSGW Sbjct: 67 TPKVYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGW 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + PV+ +EE YFF++S Y KL+ Y ESHPEFI Sbjct: 127 YCTPCESFWTETQL---EDGKCPDCGR-PVEKAKEEAYFFKMSKYAPKLIEYIESHPEFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R+NE+++ F+K GL+DL +SR +FDWGI + D ++++YVWIDAL NY+T GY Sbjct: 183 QPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYST 242 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D K+WPAD+H++GKDILRFH IYWP L++ ++PLPK+VF HG++L G K+SKS Sbjct: 243 EKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGGKMSKS 302 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNV+DP+ ++ G D +RY+L+REI G DG ++ + K++N+DLAN +GNL+SR+V Sbjct: 303 KGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNLLSRTV 362 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +MI K +DG IP + DE ++ + +++ ENM+ I AL ++ + + ++ Sbjct: 363 AMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEENMEKLRIPEALEEIWTFIGRANK 422 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 Y D PW L K + +R TVLY E +R +++ + AF+P+ + KI Sbjct: 423 YIDETTPWILAKDESKKERLGTVLYNLAESLRIISVCISAFIPETSIKI 471 >gi|118445100|ref|YP_879163.1| methionyl-tRNA synthetase [Clostridium novyi NT] gi|118135556|gb|ABK62600.1| methionyl-tRNA synthetase [Clostridium novyi NT] Length = 646 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 211/470 (44%), Positives = 314/470 (66%), Gaps = 7/470 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+A+ HIG+ Y + AD +ARF RL G D F TGTDEHGQKI + A+ G Sbjct: 6 FYITTPIYYPSAKLHIGNTYTTVAADAIARFKRLTGYDTYFLTGTDEHGQKIQRLAEGKG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T K +VD+ +D+ V++ISYD FIRTT+ H +T + +++K+ DKGDIYKG Y G Sbjct: 66 ITPKKYVDEIVAGIQDLWKVMNISYDKFIRTTDDYHVETVQKIFEKLYDKGDIYKGEYEG 125 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y E+++ + ++ DG+ + PV+ +EE YFF++S Y D+L+ Y ESHP+F Sbjct: 126 LYCTPCESFWTETQL---VDGKCPDCGR-PVEKTKEEAYFFKMSKYADRLIEYIESHPDF 181 Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 I P R+NE+++ F++ GL+DL +SR +FDWGI + D ++++YVWIDAL+NY+T GY Sbjct: 182 IQPESRKNEMLNNFLRPGLQDLCISRTSFDWGIPVSFDEKHVIYVWIDALSNYITALGYD 241 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D K+WPA++H++GKDILRFH IYWP L++ +LPLPK+VF HG++L G K+SK Sbjct: 242 QENDELYQKYWPANVHLVGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGKMSK 301 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S GNV+DP+ ++ E G D +RY+L+ EI G+DG Y + K+ N+DLAN +GNLV+R+ Sbjct: 302 SKGNVVDPVTLVNEFGTDPVRYYLLHEIPFGQDGMYTGETFIKKTNSDLANDLGNLVNRT 361 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 ++MI K +DG+IP P A + D ++ V +++ M I AL ++ +LV + Sbjct: 362 IAMINKYFDGVIPAPKAEEDIDNDLIRVALEAPKKVEGKMDALKIPEALDEIWTLVRRSN 421 Query: 426 RYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +Y D PW L K +R TVLY VE +R ++++L AF+P+ + KI Sbjct: 422 KYIDETMPWALAKEEDKRERLGTVLYNLVESLRIVSVMLSAFLPETSKKI 471 >gi|314932712|ref|ZP_07840082.1| methionine--tRNA ligase [Staphylococcus caprae C87] gi|313654542|gb|EFS18294.1| methionine--tRNA ligase [Staphylococcus caprae C87] Length = 657 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 221/524 (42%), Positives = 334/524 (63%), Gaps = 15/524 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + Sbjct: 1 MMAKDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQE 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ AG T ++D+ + + D L+IS DDFIRTTE+RH +++++ +GDIY Sbjct: 61 KAQKAGKTELEYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQ 173 G Y GWYS+ DE YY + D VY+ + G+ ++ H V+ ++EE YFF ++ Y Sbjct: 121 LGEYEGWYSVPDETYYTESQLVDPVYENGEIIGGKSPDSGHE-VELVKEESYFFNINKYT 179 Query: 174 DKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 D+LL +Y+ +P+FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWI Sbjct: 180 DRLLEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWI 239 Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 DAL NY+++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+ Sbjct: 240 DALVNYISSLGYLSDDEELFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N Sbjct: 300 HGWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN +GNLV+R++SMI K + G +P G E DE + ++ ++ ENM++ Sbjct: 360 DLANDLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEAMALETVKNFNENMESLQFS 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 AL+ V +S ++Y D +PW L K D V+ VE IR A+LLQ F+ Sbjct: 420 VALSTVWKFISRTNKYIDETQPWVLAKDENQRDMLGNVMAHLVENIRFAAVLLQPFLTHA 479 Query: 470 ANKIFDILFVADENRC-FQSLDQ--RLKPGFMLHKTFDPIFPRF 510 ++F L + D F+SL+ L ++ + PIFPR Sbjct: 480 PREVFKQLNMNDPKLSQFESLESYGALTEPILVTEKPTPIFPRL 523 >gi|170758335|ref|YP_001785405.1| methionyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree] gi|169405324|gb|ACA53735.1| methionine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree] Length = 645 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 208/469 (44%), Positives = 313/469 (66%), Gaps = 7/469 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I YP+A+ HIG+ Y + AD LARF RL G DV+F TGTDEHGQKI + A+ V Sbjct: 7 YVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEAEKV 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K +VD+ +D+ +++I YD FIRTT++ H + + ++K + DKGDIYK YSGW Sbjct: 67 TPKAYVDEIVAGIKDLWKIMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGW 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + PV+ +EE YFF++S Y KL+ Y ESHPEFI Sbjct: 127 YCTPCESFWTETQL---EDGKCPDCGR-PVEKAKEEAYFFKMSKYAPKLIEYIESHPEFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R+NE+++ F+K GL+DL +SR +FDWGI + D ++++YVWIDAL NY+T GY Sbjct: 183 QPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYNT 242 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D K+WPAD+H++GKDILRFH IYWP L++ ++PLPK+VF HG++L G K+SKS Sbjct: 243 ENDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGGKMSKS 302 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNV+DP+ ++ G D +RY+L+REI G DG ++ + K++N+DLAN +GNL+SR+V Sbjct: 303 KGNVVDPVVLVNHFGADPVRYYLLREIPFGADGMFNNEIFIKKINSDLANDLGNLLSRTV 362 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +MI K +DG IP + DE ++ + +++ E+M+ I AL ++ + + ++ Sbjct: 363 AMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEEDMEKLRIPEALEEIWTFIGRANK 422 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 Y D PW L K + +R TVLY VE +R +++ + AF+P+ + KI Sbjct: 423 YIDETTPWVLAKDESKKERLGTVLYNLVESLRIISVCISAFIPETSIKI 471 >gi|126654257|ref|ZP_01726045.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp. B14905] gi|126589290|gb|EAZ83448.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp. B14905] Length = 658 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 223/518 (43%), Positives = 332/518 (64%), Gaps = 12/518 (2%) Query: 1 MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M E++K YI+T I YP+ + HIG AY + +D +AR+ RL G DV F TG DEHGQKI Sbjct: 1 MSEQKKTFYITTPIYYPSGKFHIGTAYTTVASDAIARYKRLRGYDVRFLTGMDEHGQKIQ 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 + A AG + +V++ + + + ++DISYDDFI+TT++RH +++K D GDI Sbjct: 61 EKAAEAGKHPQDYVNEIAEAAKKLWALMDISYDDFIQTTQERHTKAVEKIFQKFLDNGDI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 YKG Y GWY E+++ + ++ DG + PV ++EE YFF + Y D+LLSY Sbjct: 121 YKGEYEGWYCTPCESFFTETQL---VDGNCPDCGR-PVHKVKEESYFFNMKKYADRLLSY 176 Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 YE + FI P R+NE+I+ F+K GL+DLS+SR +FDWGIK+P DP++++YVW+DALTNY Sbjct: 177 YEENLGFIEPESRKNEMINNFIKPGLEDLSVSRTSFDWGIKVPGDPKHVIYVWVDALTNY 236 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 +T+ GYL + + K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKKVF+HGFI+ Sbjct: 237 ITSLGYLSDDETLFNKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKVFAHGFIMM 296 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K K+SKS GNVI P +IE G+DA RYFL+RE+ G DG + + +R N DLAN + Sbjct: 297 KDGKMSKSKGNVIYPEMLIERYGLDATRYFLLRELPFGSDGVFSPESFIERTNFDLANDL 356 Query: 359 GNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 GNL++R++SMI K YDG+IP+ TE D ++ V + E+M+ LA + Sbjct: 357 GNLLNRTISMINKYYDGIIPSENLQSTEFDAALKEQAESVRIKYEESMEKMQFSVVLADL 416 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 +LVS ++Y D +PW L K D+ +V+ E + Q+A++LQ F+ + ++ + Sbjct: 417 WTLVSRTNKYIDETQPWVLAKEEADKPKLGSVMRNLAESLHQIAVMLQPFMTTIPKRMME 476 Query: 476 ILFVADENRCFQSLD---QRLKPGFMLHKTFDPIFPRF 510 L + D+ + +++ + + + PIFPR Sbjct: 477 QLGLDDKFLAWDTIETFGNTIPANIKVVEKGIPIFPRL 514 >gi|95930673|ref|ZP_01313407.1| methionyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684] gi|95133325|gb|EAT14990.1| methionyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684] Length = 510 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 215/509 (42%), Positives = 315/509 (61%), Gaps = 9/509 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+T I Y N PHIGHAY + DVLAR+ + G +V F TGTDEHGQK+ KAA Sbjct: 3 KTFYITTPIYYVNDVPHIGHAYTTLACDVLARYKKARGYEVFFLTGTDEHGQKVEKAAIA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG T D+ + F + L+I DFIRTT++RH + + ++ +I ++GDIY G Y Sbjct: 63 AGETPLELADRVMQRFAALWQKLNIDNTDFIRTTQQRHKEGVQKMFTQIQEQGDIYLGAY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 WY E ++ + ++ G P ++EE YFFR+S YQ +LL + E++P Sbjct: 123 EDWYCTPCETFWTETQLIDGCCPDC----GRPTDKLKEESYFFRMSKYQQQLLDHIEANP 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RRNEV+SFV+ GL+DLS+SR +F WGI +P D ++++YVW DAL NY+T GY Sbjct: 179 DFIQPRSRRNEVLSFVREGLRDLSISRTSFSWGIPVPGDDKHVIYVWFDALNNYITALGY 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D+ G+ KFWP +HVIGKDILRFH +YWP FL++A LPLP+KVF+HG+ +G+K+S Sbjct: 239 PDDKQGTFEKFWPCSVHVIGKDILRFHTVYWPTFLMAAGLPLPEKVFAHGWWTVEGKKMS 298 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSL NV++P +++ G+D +RYFL+RE+ G DG + L R+N+DLAN +GNLVSR Sbjct: 299 KSLQNVVEPNMLVDTYGIDPIRYFLLREVPFGLDGDFSHSALIHRINSDLANDLGNLVSR 358 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 S +M+ K + G +P P A + D+ + L+ I + M + ++AL + L+S Sbjct: 359 STAMLNKYFGGTLPEPTAMADIDQPFIDQFPAKLELIDKQMNDLAFNKALLSIWELISSA 418 Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++Y D PW L K +R TV+Y +E +R + +++ F+P +I +IL + Sbjct: 419 NKYIDDTAPWGLAKDEAQKERLGTVMYNLLEAVRLIGLMVAPFLPDTGKRIMEILGQDSD 478 Query: 483 NRCFQSLDQ--RLKPGFMLHKTFDPIFPR 509 N DQ L+ G + K P+FPR Sbjct: 479 NLMLDGQDQWGGLQAGTTIEKA-PPMFPR 506 >gi|291288265|ref|YP_003505081.1| methionyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] gi|290885425|gb|ADD69125.1| methionyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] Length = 644 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 213/478 (44%), Positives = 305/478 (63%), Gaps = 6/478 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y N PHIGHAY + D ++R+ RL G DV F TGTDEHGQKI +AAQ G Sbjct: 6 FYVTTPIYYVNDVPHIGHAYTTVACDTISRYKRLCGFDVCFLTGTDEHGQKIEQAAQKRG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T K D+ + F + +L+IS D FIRTT++ H R ++ K+ + GDIY Y G Sbjct: 66 ITPKALADEVVQRFAGLWKILNISNDKFIRTTDELHKKAVRKIFDKMKENGDIYLDHYEG 125 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WY E Y + ++ DG + ++E YFFR+S Y D+LL + E + +F Sbjct: 126 WYCTPCETYLTETQLL---DGNCCPSCGRETAKLKEPSYFFRMSKYADQLLKHIEDNKDF 182 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 + P RRNE+ISF+K GL+DLS+SR TF WGI +PD P++++YVWIDALTNY+ GY + Sbjct: 183 VRPESRRNEIISFIKDGLRDLSVSRVTFKWGIPVPDAPEHVIYVWIDALTNYIAALGYGE 242 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 + D KFWPAD HV+GKDILRFH +YWP L+SA LPLPK VF+HG+ +G+K+SKS Sbjct: 243 D-DADFQKFWPADYHVVGKDILRFHTVYWPTMLMSAGLPLPKSVFAHGWWTVEGQKMSKS 301 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 LGN IDP ++++ GVD++RYFL+RE+ G DG + L R+N DLAN +GNL++R++ Sbjct: 302 LGNAIDPAWLVDKFGVDSIRYFLLREVPFGLDGDFSFKALIHRINGDLANDLGNLLNRTM 361 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 M+ + +DG++P + D+ + RV +E+ E++ N ++AL LVS +++ Sbjct: 362 GMVNRYFDGVVPAYTEAGDEDKPLEETIERVFREVDEHITNMAFNKALMTTWELVSALNK 421 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 Y D PW L K T R +VLY ++ IR +++LL F+P+ A K+ L A E Sbjct: 422 YIDETAPWALAKDETRKGRLGSVLYSVLDGIRLVSLLLYPFMPETAVKMRRQLGTAQE 479 >gi|289450466|ref|YP_003475749.1| methionine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185013|gb|ADC91438.1| methionine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 672 Score = 435 bits (1118), Expect = e-120, Method: Compositional matrix adjust. Identities = 220/512 (42%), Positives = 321/512 (62%), Gaps = 12/512 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YIST I Y + HIGH+Y + AD +AR+ R+ G DV F TGTDEHG+KI + A+ Sbjct: 3 KKFYISTPIYYTSGNLHIGHSYSTVAADAMARYKRMAGNDVFFLTGTDEHGEKIQERAEA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG T + FVD+ +D+ + +ISYD FIRTT+ H + + +K+ D+GDIYK Y Sbjct: 63 AGKTPQAFVDELVSGIKDLWKLFNISYDKFIRTTDAEHMAGVKYIVQKLYDRGDIYKSEY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY EA++ + ++ G PV +EE YFFRLS Y D+L+ +E HP Sbjct: 123 EGWYCTPCEAFWTESQLKDGCCPDC----GRPVHKTKEESYFFRLSKYNDRLIKLFEEHP 178 Query: 185 EFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 EF+ P R NE+++ F++ GL+DL++SR +FDWGIK+P DP++++YVWIDAL+NY+T G Sbjct: 179 EFVQPESRANEMLNNFLRPGLQDLAISRTSFDWGIKVPFDPKHVVYVWIDALSNYITALG 238 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y +N KFWPAD+H++GK+I+RFH I WPA L++ +LPLPK+V+ HG+IL K K+ Sbjct: 239 YPEN-TAKFEKFWPADVHLVGKEIVRFHTIIWPALLMALDLPLPKQVYGHGWILFKEGKM 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GN++DP+ + VDA+RYFL+RE+ G DG Y + L R+N+DLAN +GNL+S Sbjct: 298 SKSKGNIVDPVVLCNRYTVDAIRYFLLREVPFGADGSYSNEALITRINSDLANDLGNLMS 357 Query: 364 RSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 R+++MI K + G +P TP +E DE + S V M AL +V L+ Sbjct: 358 RTIAMICKYFAGKLPPATPSINSE-DERLRETASEVAASYVSYMDKMQFSLALGEVWRLI 416 Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + ++Y D PW L K T +R + VL EV+R ++I + F+P+ A K+ L + Sbjct: 417 GQANKYIDVTMPWLLAKDPTKQERLAAVLCNLGEVLRLVSIYIAPFMPETAEKMQAALHL 476 Query: 480 ADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510 + + F SL++ L T +P+FPR Sbjct: 477 TEAQKAFSSLNRFDLFATEQPLSTCEPLFPRL 508 >gi|315640002|ref|ZP_07895129.1| methionine--tRNA ligase [Enterococcus italicus DSM 15952] gi|315484264|gb|EFU74733.1| methionine--tRNA ligase [Enterococcus italicus DSM 15952] Length = 669 Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust. Identities = 223/521 (42%), Positives = 327/521 (62%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+E YI+T I YP+ + HIG++Y I D +AR+ RL G DV + TG DEHGQKI K Sbjct: 1 MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAVARYKRLMGFDVFYLTGVDEHGQKIEK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A GVT + +VD+ + + + + LDISYD FIRTT+ H + +++++ D+GDIY Sbjct: 61 KADELGVTPQEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHQKAVKKIFQQLLDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVYK +G + + V+ ++EE YFFR+S Y D Sbjct: 121 LGQYEGWYSISDEEYFTETQLAEVYKDEEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL+YY+ HPEFI P R+NE+I+ F+K GL+DL++SR T WGI + +P++++YVWID Sbjct: 181 RLLAYYDEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTHSWGIPVDANPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY++ GY + D K+WPAD+H++GK+I+RFH IYWP L++ LPLPK+V+ H Sbjct: 241 ALSNYISALGYGSDDDQLFQKYWPADVHMVGKEIVRFHTIYWPIMLMALGLPLPKEVYGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + RVN D Sbjct: 301 GWLLMKEGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAVPFGSDGVFTPEDFVARVNYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K DG++PT T D + + + V+ RE M N Sbjct: 361 LANDLGNLLNRTVAMINKYCDGIVPTYRSKVTPFDSELSTTAANVIGRYREAMDNMEFST 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLA 470 ALA+V +LVS ++Y D +PW L K +A +V+ E +R +A+LLQ + + Sbjct: 421 ALAEVWTLVSRANKYIDETQPWILAKDEEKKAELDSVMIHLAESLRIVALLLQPVMTETP 480 Query: 471 NKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 KIF+ L + L P + + PIFPR Sbjct: 481 AKIFEQLGLKQMATSLTDLRFGEFPAETKVVEKGTPIFPRL 521 >gi|187777332|ref|ZP_02993805.1| hypothetical protein CLOSPO_00884 [Clostridium sporogenes ATCC 15579] gi|187774260|gb|EDU38062.1| hypothetical protein CLOSPO_00884 [Clostridium sporogenes ATCC 15579] Length = 645 Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust. Identities = 207/469 (44%), Positives = 310/469 (66%), Gaps = 7/469 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I YP+A+ HIG+ Y + AD LARF RL G DV+F TGTDEHGQKI + A+ GV Sbjct: 7 YVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEAKGV 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K +VD+ +D+ +++I YD FIRTT+ H + + ++K + DKGDIYK Y GW Sbjct: 67 TPKAYVDEIVAGIKDLWKMMNIDYDKFIRTTDDYHVELVQKIFKTLCDKGDIYKSEYEGW 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ +G PV+ +EE YFF++S Y KL+ Y ESHP+FI Sbjct: 127 YCTPCESFWTETQLVEGKCPDC----GRPVEKAKEEAYFFKMSKYAPKLIEYIESHPDFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R+NE+I+ F+K GL+DL +SR +FDWGI + D ++++YVWIDAL NY+T GY Sbjct: 183 QPESRKNEMINNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYNT 242 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D ++WPAD+H++GKDILRFH IYWP L++ ++PLPK+VF HG++L G K+SKS Sbjct: 243 EKDELYKRYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGGKMSKS 302 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNV+DP+ ++ G D +RY+L+REI G DG ++ + K++N+DLAN +GNL+SR+V Sbjct: 303 KGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGMFNNEIFIKKINSDLANDLGNLLSRTV 362 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +MI K +DG IP + DE ++ + +++ ENM+ I AL ++ + + ++ Sbjct: 363 AMIEKYFDGEIPEGNCKEDIDEDLIKLALETPRKVEENMEKLRIPEALEEIWTFIGRANK 422 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 Y D PW L K + +R TVLY VE +R +++ + AF+P+ + KI Sbjct: 423 YIDETTPWILAKDESKKERLGTVLYNLVESLRIISVCISAFIPETSIKI 471 >gi|222152165|ref|YP_002561325.1| methionyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] gi|222121294|dbj|BAH18629.1| methionyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] Length = 654 Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust. Identities = 222/517 (42%), Positives = 333/517 (64%), Gaps = 14/517 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I YP+ + HIGHAY + D +AR+ R+ G DV + TGTDEHGQKI + AQ AG Sbjct: 6 FYVTTPIYYPSGKLHIGHAYSTVAGDAIARYKRMQGYDVKYLTGTDEHGQKIQEKAQAAG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + ++D+ + + + LDIS DDFIRTTE RH +++++ ++GDIY G Y G Sbjct: 66 KSEIEYLDEIIADIQALWKKLDISNDDFIRTTEDRHKVVVEKIFERLLEQGDIYLGDYEG 125 Query: 127 WYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 WYS+ DE +Y + D +Y+G G+ ++ H PVQ ++EE YFF+LS Y D+L+ Y Sbjct: 126 WYSVPDETFYTETQLVDPIYEGEKIVGGKSPDSGH-PVQLVKEESYFFKLSKYTDRLIEY 184 Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 Y++HPEFILP+ R+NE+++ F+K GL+DL++SR +FDWGIK+P +P++++YVWIDALTNY Sbjct: 185 YDAHPEFILPVSRKNEMLNNFIKPGLEDLAVSRTSFDWGIKVPSNPKHVVYVWIDALTNY 244 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 ++ GYL + K+WPAD+H++ K+I+RFH I WPA L++ +LPLPKK+F+HG+IL Sbjct: 245 ISALGYLSEDETEFNKYWPADVHIMAKEIVRFHTIIWPALLMALDLPLPKKIFAHGWILM 304 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K K+SKS GNV+DP +I+ G+DA+RY+L+RE+ G DG + + +R N DLAN + Sbjct: 305 KDGKMSKSKGNVVDPHVLIDRYGLDAVRYYLMRELPFGSDGVFTPEAFVERTNFDLANDL 364 Query: 359 GNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 GNLV+R+++MI K +DG + G D I + + M++ AL +V Sbjct: 365 GNLVNRTIAMINKYFDGNLTGYKGQMHAVDAEIEDLAVATKKAYDNAMESMQYSVALQEV 424 Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 L+S ++Y D PW L K + + +V+Y VE IR A+LL+ F+ + KIF+ Sbjct: 425 WKLISRTNKYIDETTPWILIKDASQKELLESVMYHLVENIRFAAVLLRPFLTEAPYKIFE 484 Query: 476 ILFVADEN-RCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 L + D F SL+ + + + PIFPR Sbjct: 485 QLNLKDNALYGFDSLNTYGQIAELKVVEKATPIFPRL 521 >gi|299536738|ref|ZP_07050048.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] gi|298727852|gb|EFI68417.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] Length = 658 Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust. Identities = 224/518 (43%), Positives = 328/518 (63%), Gaps = 12/518 (2%) Query: 1 MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M E++K YI+T I YP+ + HIG AY + +D +AR+ RL G DV F TG DEHGQKI Sbjct: 1 MSEQQKTFYITTPIYYPSGKFHIGTAYTTVASDTIARYKRLKGYDVRFLTGMDEHGQKIQ 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 + A AG + +V++ + + + ++DISYDDFI+TT+ RH +++K D GDI Sbjct: 61 EKAAEAGKHPQDYVNEIADAAKKLWGLMDISYDDFIQTTQDRHTKAVEKIFQKFLDNGDI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 YKG Y GWY E+++ + ++ DG + PV ++EE YFF + Y D+LL+Y Sbjct: 121 YKGEYEGWYCTPCESFFTETQL---VDGNCPDCGR-PVHKVKEESYFFNMKKYADRLLAY 176 Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 YE + EFI P R+NE+I+ F+K GL+DLS+SR +FDWGIK+P DP++++YVW+DALTNY Sbjct: 177 YEENLEFIEPESRKNEMINNFIKPGLEDLSVSRTSFDWGIKVPGDPKHVIYVWVDALTNY 236 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 +T GYL + K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKKVF+HGFI+ Sbjct: 237 ITALGYLSEDESLFNKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKVFAHGFIMM 296 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K K+SKS GNVI P +IE G+DA RYFL+RE+ G DG + + +R N DLAN + Sbjct: 297 KDGKMSKSKGNVIYPEMLIERYGLDATRYFLLRELPFGSDGVFSPESFIERTNFDLANDL 356 Query: 359 GNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 GNL++R++SMI K +DG+IPT TE D ++ V + E+M+ LA + Sbjct: 357 GNLLNRTISMINKYFDGIIPTENLQPTEFDAALKEQAESVRIKYEESMEKMQFSVVLADL 416 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 +LVS ++Y D +PW L K D+ V+ E + Q+A++LQ F+ ++ D Sbjct: 417 WTLVSRTNKYIDETQPWVLAKEESDKPKLGAVMRNLAESLHQIAVMLQPFMTTTPKRMID 476 Query: 476 ILFVADENRCFQSLD---QRLKPGFMLHKTFDPIFPRF 510 L + D+ + +++ + + + PIFPR Sbjct: 477 QLGLDDKFLAWDTIETFGNTIPANIKVVEKGIPIFPRL 514 >gi|329929628|ref|ZP_08283327.1| methionine--tRNA ligase [Paenibacillus sp. HGF5] gi|328936005|gb|EGG32459.1| methionine--tRNA ligase [Paenibacillus sp. HGF5] Length = 662 Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust. Identities = 220/517 (42%), Positives = 330/517 (63%), Gaps = 12/517 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI + Sbjct: 1 MADKKTFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDVRYLTGTDEHGQKIER 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A AG T + FVD +D+ LDIS +DFIRTTEKRH + +++++ + DIY Sbjct: 61 KAAEAGKTPQQFVDDIVAGIKDLWKKLDISNEDFIRTTEKRHTTVVQEVFERLLKQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y GWY E+++ + ++ G PV+ ++EE YFFR+S Y D+LL YY Sbjct: 121 KGEYEGWYCTPCESFFLERQLVNGNCPDC----GRPVELVKEESYFFRMSKYVDRLLQYY 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 E +P+FI P+ R+NE+I+ F+K GL+DL++SR T++WG+K+ DP++++YVWIDAL NY+ Sbjct: 177 EENPDFIQPVSRKNEMINNFIKPGLEDLAVSRTTYEWGVKVKSDPKHVIYVWIDALLNYI 236 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T GY K+WPAD+H++ K+I+RFH IYWP L++ ++PLPKKVF+HG++L K Sbjct: 237 TALGYGTEDTSLYDKYWPADVHLMSKEIVRFHTIYWPIILMALDVPLPKKVFAHGWLLMK 296 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + + +RVN+DLAN +G Sbjct: 297 DGKMSKSKGNVVDPVTMIDRYGLDALRYYLLREVPFGADGTFTPESFVERVNSDLANDLG 356 Query: 360 NLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 NL++R+V+M+ K +DG +P T D +I V ++ M+N AL + Sbjct: 357 NLLNRTVAMVDKYFDGEVPAFSAGVTPFDAAIEEAAKSVYDKVETAMENMEFSVALTAIS 416 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 VS ++Y D +PW L K R ++V+ VE +R +ILLQ F+ + K+++ Sbjct: 417 QFVSRSNKYIDETQPWTLAKDESKRHELASVMSHLVETLRIASILLQPFLTRTPKKMWEQ 476 Query: 477 LFVAD-ENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 L +A+ E ++S Q + G L K +PIFPR Sbjct: 477 LGLAEGELTTWESGRQLGAIPAGTKLQKG-EPIFPRL 512 >gi|168177409|ref|ZP_02612073.1| methionyl-tRNA synthetase [Clostridium botulinum NCTC 2916] gi|182670464|gb|EDT82438.1| methionyl-tRNA synthetase [Clostridium botulinum NCTC 2916] Length = 645 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 207/469 (44%), Positives = 312/469 (66%), Gaps = 7/469 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I YP+A+ HIG+ Y + AD LARF RL G DV+F TGTDEHGQKI + A+ V Sbjct: 7 YVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEAKKV 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K +VD+ +++ +++I YD FIRTT++ H + + ++K + DKGDIYK YSGW Sbjct: 67 TPKAYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGW 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + PV+ +EE YFF++S Y KL+ Y ESHPEFI Sbjct: 127 YCTPCESFWTETQL---EDGKCPDCGR-PVEKAKEEAYFFKMSKYAPKLIEYIESHPEFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R+NE+++ F+K GL+DL +SR +FDWGI + D ++++YVWIDAL NY+T GY Sbjct: 183 QPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYST 242 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D K+WPAD+H++GKDILRFH IYWP L++ ++PLPK+VF HG++L G K+SKS Sbjct: 243 EKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGGKMSKS 302 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNV+DP+ ++ G D +RY+L+REI G DG ++ + K++N+DLAN +GNL+SR+V Sbjct: 303 KGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNLLSRTV 362 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +MI K +DG IP + DE ++ + +++ ENM+ I AL ++ + + ++ Sbjct: 363 AMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEENMEKLRIPEALEEIWTFIGRANK 422 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 Y D PW L K + +R TVLY E +R +++ + AF+P+ + KI Sbjct: 423 YIDETTPWILAKDESKKERLGTVLYNLAESLRIISVCISAFIPETSIKI 471 >gi|331270594|ref|YP_004397086.1| methionyl-tRNA synthetase [Clostridium botulinum BKT015925] gi|329127144|gb|AEB77089.1| methionyl-tRNA synthetase [Clostridium botulinum BKT015925] Length = 646 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 208/470 (44%), Positives = 314/470 (66%), Gaps = 7/470 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+A+ HIG+ Y + AD +ARF RL G D F TGTDEHGQKI + A+ G Sbjct: 6 FYITTPIYYPSAKLHIGNTYTTVAADAIARFKRLTGYDTYFLTGTDEHGQKIQRLAEAKG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T K +VD+ +D+ V++++YD FIRTT+ H +T + ++KK+ D+GDIYKG Y G Sbjct: 66 ITPKEYVDEIVAGIKDLWKVMNVNYDKFIRTTDDYHVETVQKIFKKLYDQGDIYKGEYEG 125 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y E+++ + ++ DG+ + PV+ +EE YFF++S Y D+L+ Y E HPEF Sbjct: 126 LYCTPCESFWTETQL---VDGKCPDCGR-PVEKTKEEAYFFKMSKYADRLIKYIEYHPEF 181 Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 I P R+NE+++ F++ GL+DL +SR +F+WGI + D ++++YVWIDALTNY+T GY Sbjct: 182 IQPESRKNEMLNNFLRPGLQDLCISRTSFNWGIPVSFDEKHVIYVWIDALTNYITALGYN 241 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + D K+WPA++H++GKDILRFH IYWP L++ +LPLPK+VF HG++L G K+SK Sbjct: 242 QDNDELYQKYWPANVHLVGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGKMSK 301 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S GNV+DP+ ++ G DA+RY+L+ EI G+DG Y + K+ N+DLAN +GNLV+R+ Sbjct: 302 SKGNVVDPVTLVNHFGTDAVRYYLLHEIPFGQDGMYTSETFIKKTNSDLANDLGNLVNRT 361 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 ++MI K +DG+IP P A + D+ ++ + ++ M I AL ++ +LV + Sbjct: 362 IAMINKYFDGIIPVPTAKDDIDDELIKIALEAPGKVEAKMDELKIPEALDKIWTLVRRSN 421 Query: 426 RYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +Y D PW L K +R TVLY VE +R ++++L AF+P+ + KI Sbjct: 422 KYIDETMPWALAKEEDKKERLGTVLYNLVESLRIVSVMLSAFLPETSKKI 471 >gi|168182315|ref|ZP_02616979.1| methionine--tRNA ligase [Clostridium botulinum Bf] gi|237793393|ref|YP_002860945.1| methionyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657] gi|182674668|gb|EDT86629.1| methionine--tRNA ligase [Clostridium botulinum Bf] gi|229262065|gb|ACQ53098.1| methionine--tRNA ligase [Clostridium botulinum Ba4 str. 657] Length = 645 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 207/469 (44%), Positives = 312/469 (66%), Gaps = 7/469 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I YP+A+ HIG+ Y + AD LARF RL G DV+F TGTDEHGQKI + A+ V Sbjct: 7 YVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEAKKV 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K +VD+ +++ +++I YD FIRTT++ H + + ++K + DKGDIYK YSGW Sbjct: 67 TPKAYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGW 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + PV+ +EE YFF++S Y KL+ Y ESHPEFI Sbjct: 127 YCTPCESFWTETQL---EDGKCPDCGR-PVEKAKEEAYFFKMSKYAPKLIEYIESHPEFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R+NE+++ F+K GL+DL +SR +FDWGI + D ++++YVWIDAL NY+T GY Sbjct: 183 QPESRKNEMLNNFLKPGLQDLCISRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYST 242 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D K+WPAD+H++GKDILRFH IYWP L++ ++PLPK+VF HG++L G K+SKS Sbjct: 243 EKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGGKMSKS 302 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNV+DP+ ++ G D +RY+L+REI G DG ++ + K++N+DLAN +GNL+SR+V Sbjct: 303 KGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNLLSRTV 362 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +MI K +DG IP + DE ++ + +++ ENM+ I AL ++ + + ++ Sbjct: 363 AMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEENMEKLRIPEALEEIWTFIGRANK 422 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 Y D PW L K + +R TVLY E +R +++ + AF+P+ + KI Sbjct: 423 YIDETTPWILAKDESKKERLGTVLYNLAESLRIISVCISAFIPETSIKI 471 >gi|261405922|ref|YP_003242163.1| methionyl-tRNA synthetase [Paenibacillus sp. Y412MC10] gi|261282385|gb|ACX64356.1| methionyl-tRNA synthetase [Paenibacillus sp. Y412MC10] Length = 662 Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust. Identities = 220/517 (42%), Positives = 330/517 (63%), Gaps = 12/517 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI + Sbjct: 1 MADKKTFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDVRYLTGTDEHGQKIER 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A AG T + FVD +D+ LDIS +DFIRTTEKRH + +++++ + DIY Sbjct: 61 KAAEAGKTPQQFVDDIVAGIKDLWKKLDISNEDFIRTTEKRHTTVVQDVFERLLKQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y GWY E+++ + ++ G PV+ ++EE YFFR+S Y D+LL YY Sbjct: 121 KGEYEGWYCTPCESFFLERQLVNGNCPDC----GRPVELVKEESYFFRMSKYVDRLLQYY 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 E +P+FI P+ R+NE+I+ F+K GL+DL++SR T++WG+K+ DP++++YVWIDAL NY+ Sbjct: 177 EENPDFIQPVSRKNEMINNFIKPGLEDLAVSRTTYEWGVKVKSDPKHVIYVWIDALLNYI 236 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T GY K+WPAD+H++ K+I+RFH IYWP L++ ++PLPKKVF+HG++L K Sbjct: 237 TALGYGTEDTSLYDKYWPADVHLMSKEIVRFHTIYWPIILMALDVPLPKKVFAHGWLLMK 296 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GNV+DP+ +I+ G+DALRY+L+RE+ G DG + + +RVN+DLAN +G Sbjct: 297 DGKMSKSKGNVVDPVTMIDRYGLDALRYYLLREVPFGADGTFTPESFVERVNSDLANDLG 356 Query: 360 NLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 NL++R+V+M+ K +DG +P T D +I V ++ M+N AL + Sbjct: 357 NLLNRTVAMVDKYFDGEVPAFSAGVTPFDAAIEEAAKSVYDKVETAMENMEFSVALTAIS 416 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 VS ++Y D +PW L K R ++V+ VE +R +ILLQ F+ + K+++ Sbjct: 417 QFVSRSNKYIDETQPWTLAKDESKRHELASVMSHLVEALRIASILLQPFLTRTPKKMWEQ 476 Query: 477 LFVAD-ENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 L +A+ E ++S Q + G L K +PIFPR Sbjct: 477 LGLAEGELTTWESGRQLGAIPAGTKLQKG-EPIFPRL 512 >gi|226947300|ref|YP_002802391.1| methionine--tRNA ligase [Clostridium botulinum A2 str. Kyoto] gi|226841497|gb|ACO84163.1| methionine--tRNA ligase [Clostridium botulinum A2 str. Kyoto] Length = 645 Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust. Identities = 207/469 (44%), Positives = 312/469 (66%), Gaps = 7/469 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I YP+A+ HIG+ Y + AD LARF RL G DV+F TGTDEHGQKI + A+ V Sbjct: 7 YVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEAKKV 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K +VD+ +++ +++I YD FIRTT++ H + + ++K + DKGDIYK YSGW Sbjct: 67 TPKAYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGW 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + PV+ +EE YFF++S Y KL+ Y ESHPEFI Sbjct: 127 YCTPCESFWTETQL---EDGKCPDCGR-PVEKAKEEAYFFKMSKYAPKLIEYIESHPEFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R+NE+++ F+K GL+DL +SR +FDWGI + D ++++YVWIDAL NY+T GY Sbjct: 183 QPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYNT 242 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D K+WPAD+H++GKDILRFH IYWP L++ ++PLPK+VF HG++L G K+SKS Sbjct: 243 EKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGGKMSKS 302 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNV+DP+ ++ G D +RY+L+REI G DG ++ + K++N+DLAN +GNL+SR+V Sbjct: 303 KGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNLLSRTV 362 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +MI K +DG IP + DE ++ + +++ ENM+ I AL ++ + + ++ Sbjct: 363 AMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEENMEKLRIPEALEEIWTFIGRANK 422 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 Y D PW L K + +R TVLY E +R +++ + AF+P+ + KI Sbjct: 423 YIDETTPWILAKDESKKERLGTVLYNLAESLRIISVCISAFIPETSIKI 471 >gi|291166390|gb|EFE28436.1| methionine--tRNA ligase [Filifactor alocis ATCC 35896] Length = 642 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 206/489 (42%), Positives = 322/489 (65%), Gaps = 8/489 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ Y++T I YP+ + HIGH Y + AD ++R+ R G DV F TGTDEHG+KI K A+ Sbjct: 3 KKTFYVTTPIYYPSGRLHIGHTYTTVAADAISRYKRFAGFDVRFLTGTDEHGEKIQKKAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ +++D + + + +V++ISYDDFIRTTE RH + + +++K+ D+GDIY G Sbjct: 63 EMGLEPIIYLDNMISDIKKLWNVMEISYDDFIRTTESRHEERVQKIFQKLYDQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + EA++ + ++ D + + H V+ +E+ YFFRLS YQD+L+ YYE H Sbjct: 123 YEGHYCVECEAFWTESQL---EDNKCPDC-HREVESKKEQSYFFRLSKYQDRLIEYYEQH 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+F P R+NE+++ F+K GL+DLS+SR +FDWG+K+P D ++++YVWIDAL NY+T Sbjct: 179 PDFCFPESRKNEMLNNFLKKGLEDLSVSRTSFDWGVKVPFDERHVIYVWIDALCNYITAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY DN +A +WPA++ ++GK+I+RFH I WPA L++ +LPLP+KV+ HG+IL +K Sbjct: 239 GYPDNTKEMQA-YWPANMQIVGKEIMRFHTIIWPALLMALDLPLPQKVYGHGWILFSDDK 297 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+ P +IE G+DAL+YFL+RE G+DG Y G R+N+DL N +GNL+ Sbjct: 298 MSKSKGNVVYPEPIIERYGIDALKYFLLREFVFGQDGNYTNRGFLTRINSDLVNDLGNLL 357 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+VSM+ K DG++ A TE DES+ ++ + + ++ E M+N + A ++ LV Sbjct: 358 SRTVSMVEKYTDGIVMEYNASTEFDESLETIINELFEKFDEAMENMQFNEAFEELWKLVR 417 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++Y D PW+L K T + +VLY +E +R +A+ L+ + ++KI + + + Sbjct: 418 RANKYIDETMPWKLAKDDTKQEELRSVLYHLIETLRVVAVFLRPMLTITSDKILEQINIP 477 Query: 481 DENRCFQSL 489 E S+ Sbjct: 478 VEEATLDSV 486 >gi|169825668|ref|YP_001695826.1| methionyl-tRNA synthetase [Lysinibacillus sphaericus C3-41] gi|168990156|gb|ACA37696.1| Methionyl-tRNA synthetase [Lysinibacillus sphaericus C3-41] Length = 663 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 218/516 (42%), Positives = 331/516 (64%), Gaps = 11/516 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++++ YI+T I YP+ + HIG AY + +D +AR+ RL G DV F TG DEHGQKI + Sbjct: 8 EQKKTFYITTPIYYPSGKFHIGTAYTTVASDAIARYKRLRGYDVRFLTGMDEHGQKIQEK 67 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A AG + +V++ + + + + ++DI+YDDFI+TT++RH +++K D GDIYK Sbjct: 68 AAEAGKHPQDYVNEIAESAKKLWALMDITYDDFIQTTQERHTKAVEKIFQKFLDNGDIYK 127 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 G Y GWY E+++ + ++ DG + PV ++EE YFF + Y D+LL+YYE Sbjct: 128 GEYEGWYCTPCESFFTETQL---VDGNCPDCGR-PVHKVKEESYFFNMKKYADRLLAYYE 183 Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 + EFI P R+NE+I+ F+K GL+DLS+SR +FDWGIK+P D ++++YVW+DALTNY+T Sbjct: 184 ENLEFIEPESRKNEMINNFIKPGLEDLSVSRTSFDWGIKVPGDAKHVIYVWVDALTNYIT 243 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 + GYL + + K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKKVF+HGFI+ K Sbjct: 244 SLGYLSDDETLFNKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKVFAHGFIMMKD 303 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKS GNVI P +IE G+DA RYFL+RE+ G DG + + +R N DLAN +GN Sbjct: 304 GKMSKSKGNVIYPEMLIERYGLDATRYFLLRELPFGSDGVFSPESFIERTNFDLANDLGN 363 Query: 361 LVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 L++R++SMI K +DG+IP+ TE D ++ V + E+M+ LA + + Sbjct: 364 LLNRTISMINKYFDGIIPSENLQSTEFDAALKEQAESVRIKYEESMEKMQFSVVLADLWT 423 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 LVS ++Y D +PW L K D+ TV+ E + Q+A++LQ F+ ++ + L Sbjct: 424 LVSRTNKYIDETQPWVLAKEEADKPKLGTVMRNLAESLHQIAVMLQPFMTTTPKRMMEQL 483 Query: 478 FVADENRCFQSLD---QRLKPGFMLHKTFDPIFPRF 510 + D+ + +++ + + + PIFPR Sbjct: 484 GLDDKFLAWDTIETFGNTIPANIKVVEKGIPIFPRL 519 >gi|82750197|ref|YP_415938.1| methionyl-tRNA synthetase [Staphylococcus aureus RF122] gi|82655728|emb|CAI80127.1| ethionyl-tRNA synthetase [Staphylococcus aureus RF122] Length = 657 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 220/523 (42%), Positives = 329/523 (62%), Gaps = 19/523 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE YY + ++ D QY N + + V+ ++EE YFF +S Y D Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +Y+ +P+FI P R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+H Sbjct: 240 ALVNYISSLGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N D Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNLV+R++SMI K +DG +P G E DE + ++ ++ E+M++ Sbjct: 360 LANDLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ V +S ++Y D PW L K + D V+ VE IR A+LL+ F+ Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479 Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510 +IF+ L + + F SL+Q L M+ PIFPR Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522 >gi|163791030|ref|ZP_02185451.1| methionyl-tRNA synthetase [Carnobacterium sp. AT7] gi|159873675|gb|EDP67758.1| methionyl-tRNA synthetase [Carnobacterium sp. AT7] Length = 675 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 218/523 (41%), Positives = 326/523 (62%), Gaps = 13/523 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG+AY I DV+AR+ R+ DV + TG+DEHGQKI Sbjct: 1 MTEKKTFYITTPIYYPSGKLHIGNAYSTIACDVMARYKRMQDFDVFYLTGSDEHGQKIEN 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ +T + +VD+ ++ +++ ++L+IS D FIRTT+ H ++++ +GDIY Sbjct: 61 KAQELNITPQEYVDEMAKGMQNLWELLEISNDKFIRTTDPIHEKVVADIFERFLAQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQ 173 Y GWYS+ DE +Y + + V + A+G + +PV+ ++EE YFFR+S Y Sbjct: 121 LDEYEGWYSVPDETFYTETQLVDVERDAEGTIIGGKSPDSGHPVELIKEESYFFRMSKYA 180 Query: 174 DKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 D+LL+YY HP+FI P R+NE+I+ F+K GL+DL++SR TF WG+K+P +P++++YVWI Sbjct: 181 DRLLAYYNEHPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVKVPSNPKHVIYVWI 240 Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 DAL NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKK+F Sbjct: 241 DALANYITALGYGTDDTSLFDKFWPADVHMVGKEIVRFHTIYWPIMLMALDLPLPKKIFG 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG++L K K+SKS GNV+ P ++E+ G+DALRY+L+RE+ G DG + + RVN Sbjct: 301 HGWLLMKEGKMSKSKGNVVYPEMLVEQYGLDALRYYLMREVTFGSDGVFTPEDFVSRVNY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN +GNL++R+++MI K +DG +P G TE D + +V +E M+N Sbjct: 361 DLANDLGNLLNRTIAMINKYFDGKVPDYTGNVTEFDAVLKETAEKVCTNYQEEMENMQFS 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 AL+ V L+S ++Y D PW+L K + ++V+ E +R AILLQ F+ Sbjct: 421 SALSHVWVLISRANKYIDETAPWKLAKEEDQKNELASVMVHLAETLRISAILLQPFLTHA 480 Query: 470 ANKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 ++F L V E S Q + K PIFPR Sbjct: 481 PKEVFAQLGVEGEFAGDWSTIQFGSFPTNTTVIKKGTPIFPRL 523 >gi|148378083|ref|YP_001252624.1| methionyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|153931420|ref|YP_001382482.1| methionyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|153936823|ref|YP_001386034.1| methionyl-tRNA synthetase [Clostridium botulinum A str. Hall] gi|148287567|emb|CAL81631.1| methionyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|152927464|gb|ABS32964.1| methionyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|152932737|gb|ABS38236.1| methionine--tRNA ligase [Clostridium botulinum A str. Hall] Length = 645 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 207/469 (44%), Positives = 313/469 (66%), Gaps = 7/469 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I YP+A+ HIG+ Y + AD LARF RL G DV+F TGTDEHGQKI + A+ V Sbjct: 7 YVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEAKKV 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T KV+VD+ +++ +++I YD FIRTT++ H + + ++K + DKGDIYK YSGW Sbjct: 67 TPKVYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGW 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + + V+ +EE YFF++S Y KL+ Y ESHPEFI Sbjct: 127 YCTPCESFWTETQL---EDGKCPDCGRS-VEKAKEEAYFFKMSKYAPKLIEYIESHPEFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R+NE+++ F+K GL+DL +SR +FDWGI + D ++++YVWIDAL NY+T GY Sbjct: 183 QPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYST 242 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D K+WPAD+H++GKDILRFH IYWP L++ ++PLPK+VF HG++L G K+SKS Sbjct: 243 EKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGGKMSKS 302 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNV+DP+ ++ G D +RY+L+REI G DG ++ + K++N+DLAN +GNL+SR+V Sbjct: 303 KGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNLLSRTV 362 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +MI K +DG IP + DE ++ + +++ ENM+ I AL ++ + + ++ Sbjct: 363 AMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEENMEKLRIPEALEEIWTFIGRANK 422 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 Y D PW L K + +R TVLY E +R +++ + AF+P+ + KI Sbjct: 423 YIDETTPWILAKDESKKERLGTVLYNLAESLRIISVCISAFIPETSIKI 471 >gi|253575851|ref|ZP_04853186.1| methionyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844894|gb|EES72907.1| methionyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 673 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 221/524 (42%), Positives = 328/524 (62%), Gaps = 15/524 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + YI++ I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI + Sbjct: 1 MSNKPTFYITSPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G T + FVD + + + LDISYDDFIRTTE RH ++ ++ +GDIY Sbjct: 61 KAKEKGQTPQQFVDGIVAGIKQLWEKLDISYDDFIRTTEPRHKQVVEAIFDRLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQ 173 KG Y GWYS+ DE YY + + V + G+ + + V+ ++EE YFFR+S Y Sbjct: 121 KGEYEGWYSIPDETYYTESQLVDVIRNEKGEVIGGKSPESGHAVELVKEECYFFRMSKYV 180 Query: 174 DKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 D+LL +YE +P+FI P R+NE+I+ F+K GL+DL++SR TFDWG+K+ DP++++YVWI Sbjct: 181 DRLLKFYEENPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVKGDPKHVVYVWI 240 Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 DAL+NY+T GY + ++WPAD+H++GK+I+RFH IYWP L++ LPLPKKVF Sbjct: 241 DALSNYITALGYGTDNQELFERYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFG 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG++L KG K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +RVN+ Sbjct: 301 HGWLLMKGGKMSKSKGNVVDPNVLIDRYGLDATRYYLLREVPFGSDGSFTPESFVQRVNS 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLI 410 DLAN +GNL++R+V+M+ K + G +P P A T D + ++++ E M+N Sbjct: 361 DLANDLGNLLNRTVAMMEKYFGGEVPAYEPNA-TAFDAELEQAALDTVRKVEEVMENMGF 419 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPK 468 AL + + +S ++Y D +PW L K + ++V+ E +R +ILLQ F+ + Sbjct: 420 SVALTHIGAFISRTNKYIDETQPWVLAKDEAKKGELASVMAHLAESLRIASILLQPFLTQ 479 Query: 469 LANKIFDILFVA-DENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510 KI+ L +A E ++S L P +PIFPR Sbjct: 480 APAKIWAQLGIAPGELTTWESAKTFGLIPAGTKLVKGEPIFPRL 523 >gi|325288365|ref|YP_004264546.1| methionyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] gi|324963766|gb|ADY54545.1| methionyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] Length = 655 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 224/515 (43%), Positives = 324/515 (62%), Gaps = 20/515 (3%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I YPNA PHIG AY I AD +AR R+ G DV F TGTDE+ QKI + A++ Sbjct: 2 KYYITTPIYYPNASPHIGTAYTTIAADAMARLRRMMGDDVYFLTGTDENAQKIVRTAESK 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ +VD F+++ +LDIS DDFIRTTE+RH + + K+ ++GDIYK Y Sbjct: 62 GMAPLDYVDNIVAKFKELWRILDISNDDFIRTTEERHAKVVQHFFTKLFEQGDIYKSEYE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY E ++ ++ + +G + V+ ++EE YFFRLS YQD+LL Y +++PE Sbjct: 122 GWYCTPCETFWTENRLVEGRCPNLDCGRE--VELLKEESYFFRLSKYQDRLLEYIKANPE 179 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P+ RRNE+I F++SGL+DL ++R TF+WGI++P DP++++YVW+DAL NY++ GY Sbjct: 180 FIQPVSRRNEMIKFIESGLEDLCVTRTTFEWGIQVPFDPKHVVYVWLDALINYISALGY- 238 Query: 246 DNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKI 303 PDG K ++WPADLH++GKDI+RFH + WP L++ +PLPKKVF HG+ + K G KI Sbjct: 239 --PDGEKYQRYWPADLHLVGKDIVRFHTVIWPIILMAMEIPLPKKVFGHGWFMSKEGGKI 296 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV D E+I G D +RYFL++E+ G DG Y +D L +++N+DLAN +GN +S Sbjct: 297 SKSRGNVQDSFELIARYGSDPIRYFLLKEMQYGLDGTYSEDDLVEKLNSDLANDLGNFIS 356 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS++M+ K DG++P PG + D+ + + V I E M + +A+ + VS Sbjct: 357 RSLAMVEKYRDGIVPEPGEDSVLDKELKELAVSVKTGIEEKMLDCDTAKAIEYLWQFVSR 416 Query: 424 VDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++Y D PW L + +P+ R TVLY +E IR L + F+P + K+ +L Sbjct: 417 CNKYVDETAPWALAR-DPEQKCRLDTVLYNLIEAIRILGVFCAPFMPGIPLKLQPLL--- 472 Query: 481 DENRCFQSLDQRLK-----PGFMLHKTFDPIFPRF 510 + F + K PG + K DPIFPR Sbjct: 473 NSGNLFTKWNDAGKWKIIVPGTKVIKG-DPIFPRI 506 >gi|302332203|gb|ADL22396.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JKD6159] Length = 657 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 220/523 (42%), Positives = 328/523 (62%), Gaps = 19/523 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE YY + ++ D QY N + + V+ ++EE YFF +S Y D Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +Y+ +P+FI P R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+H Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N D Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNLV+R++SMI K +DG +P G E DE + ++ ++ E+M++ Sbjct: 360 LANDLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ V +S ++Y D PW L K + D V+ VE IR A+LL+ F+ Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479 Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510 +IF+ L + + F SL+Q L M+ PIFPR Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522 >gi|253680951|ref|ZP_04861754.1| methionine--tRNA ligase [Clostridium botulinum D str. 1873] gi|253562800|gb|EES92246.1| methionine--tRNA ligase [Clostridium botulinum D str. 1873] Length = 646 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 208/470 (44%), Positives = 311/470 (66%), Gaps = 7/470 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+A+ HIG+ Y + AD +ARF RL G D F TGTDEHGQKI + A+ G Sbjct: 6 FYITTPIYYPSAKLHIGNTYTTVAADAIARFKRLTGYDTYFLTGTDEHGQKIQRLAEAKG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T K +VD+ +D+ V+++ YD FIRTT+ H +T + ++KK+ DKGDIYKG Y G Sbjct: 66 ITPKEYVDEIVSGIKDLWKVMNVKYDKFIRTTDDYHVETVQKIFKKLYDKGDIYKGEYEG 125 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y E+++ + ++ G A V+ +EE YFF++S Y D+L+ Y E+H EF Sbjct: 126 LYCTPCESFWTETQLVDGKCPDCGRA----VEKTKEEAYFFKMSKYADRLIEYIETHSEF 181 Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 I P R+NE+++ F++ GL+DL +SR +F+WGI + D ++++YVWIDALTNY+T GY Sbjct: 182 IQPESRKNEMLNNFLRPGLQDLCISRTSFNWGIPVSFDEKHVIYVWIDALTNYITALGYN 241 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + D K+WPA++H++GKDILRFH IYWP L++ +LPLPK+VF HG++L G K+SK Sbjct: 242 QDNDELYQKYWPANVHLVGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGKMSK 301 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S GNV+DP+ ++ G DA+RY+L+ EI G+DG Y + K+ N+DLAN +GNLV+R+ Sbjct: 302 SKGNVVDPVTLVNHFGTDAVRYYLLHEIPFGQDGMYTSETFIKKTNSDLANDLGNLVNRT 361 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 ++MI K +DG+IP P A + D+ ++ V + + + M I AL ++ +LV + Sbjct: 362 IAMINKYFDGVIPAPTAKDDIDDELIKVALEIPERVERKMDLLKIPEALDEIWTLVRRSN 421 Query: 426 RYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +Y D PW L K +R TVLY VE +R ++++L AF+P+ + KI Sbjct: 422 KYIDETMPWALAKEEDKKERLGTVLYNLVESLRIVSVILSAFLPETSKKI 471 >gi|21282174|ref|NP_645262.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|49485354|ref|YP_042575.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|297207407|ref|ZP_06923846.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300910366|ref|ZP_07127819.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|25009356|sp|Q8NY00|SYM_STAAW RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|60390700|sp|Q6GBZ8|SYM_STAAS RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|21203610|dbj|BAB94310.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|49243797|emb|CAG42222.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|296887970|gb|EFH26864.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300888355|gb|EFK83542.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] Length = 657 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 219/523 (41%), Positives = 328/523 (62%), Gaps = 19/523 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE YY + ++ D QY N + + V+ ++EE YFF +S Y D Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +Y+ +P+FI P R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+H Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N D Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNLV+R++SM+ K +DG +P G E DE + ++ ++ E+M++ Sbjct: 360 LANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ V +S ++Y D PW L K + D V+ VE IR A+LL+ F+ Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479 Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510 +IF+ L + + F SL+Q L M+ PIFPR Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522 >gi|157363213|ref|YP_001469980.1| methionyl-tRNA synthetase [Thermotoga lettingae TMO] gi|157313817|gb|ABV32916.1| methionyl-tRNA synthetase [Thermotoga lettingae TMO] Length = 624 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 219/495 (44%), Positives = 321/495 (64%), Gaps = 10/495 (2%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I Y N+ PH+G AY IIAD++AR+ R+ G DV F TGTDEHGQKI +A+ + Sbjct: 2 KFYITTPIYYVNSDPHVGSAYTTIIADIIARYKRMMGYDVFFLTGTDEHGQKILQASSSL 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G + F D+ + F+ + L+I+ D FIRTT+ H + KK+ + DIYKG Y Sbjct: 62 GKDPQSFCDELADRFKQLWKKLNITNDGFIRTTDPNHMKVVQYFVKKMVENNDIYKGEYR 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY + E Y+N+DE+ G+D + + ++++ E+ YFFRLS YQDKLL YYE HPE Sbjct: 122 GWYCVPCETYWNEDEI--GSD-KLCPSCGRELKYVSEQNYFFRLSRYQDKLLRYYEEHPE 178 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 F+ P RRNE++ ++ GLKDLS++R TF WG+ +PDDP++++YVW+DAL NY++ GY Sbjct: 179 FVQPDFRRNEMMRILEGGLKDLSITRTTFKWGVPMPDDPEHVIYVWVDALINYISAIGY- 237 Query: 246 DNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 P+ K K+WPADLH+IGK+I RFH+I WPA L+SA L LP+ VF+HG++ G+KI Sbjct: 238 --PEDLKTFEKYWPADLHLIGKEINRFHSIIWPAMLMSAGLELPRTVFAHGWLTVDGQKI 295 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGN IDP +EE G D LR++LVR+I GKDG + + L R+N+DLAN GNL+ Sbjct: 296 SKSLGNAIDPKYFVEEYGNDVLRFYLVRDINFGKDGDFSEKNLVNRLNSDLANDYGNLLH 355 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+++MI K Y +P PGA + DE + +E ++ M + +A+ +V+ ++ Sbjct: 356 RTLAMIKKYYSSTMPRPGAHEQIDEKFKHDILQCCKEYQQFMDQYSLTQAVEKVMEALAI 415 Query: 424 VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVAD 481 ++YFD +KPW L K+ + D+ STVL+ E + ++A + +P + ++F L F Sbjct: 416 SNKYFDERKPWVLAKQKDFDKLSTVLFNVCESLLKVATMFSPIMPDSSEEVFSRLGFDQK 475 Query: 482 ENRCFQSLDQRLKPG 496 ++ LKPG Sbjct: 476 SSKYMLETWNILKPG 490 >gi|223044412|ref|ZP_03614445.1| methionyl-tRNA synthetase [Staphylococcus capitis SK14] gi|222442201|gb|EEE48313.1| methionyl-tRNA synthetase [Staphylococcus capitis SK14] Length = 656 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 219/521 (42%), Positives = 332/521 (63%), Gaps = 15/521 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + D L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTELEYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y GWYS+ DE YY + D VY+ + G+ ++ H V+ ++EE YFF ++ Y D+L Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGEIVGGKSPDSGHE-VELVKEESYFFNINKYTDRL 181 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 L +Y+ +P+FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL Sbjct: 182 LEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+HG+ Sbjct: 242 VNYISSLGYLSDDEELFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N DLA Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNLV+R++SMI K + G +P G E DE + ++ ++ ENM++ AL Sbjct: 362 NDLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEAMALETVKNFNENMESLQFSVAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + V +S ++Y D +PW L K R V+ VE IR A+LLQ F+ + Sbjct: 422 STVWKFISRTNKYIDETQPWVLAKDEDQRDMLGNVMAHLVENIRFAAVLLQPFLTHAPRE 481 Query: 473 IFDILFVADENRC-FQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +F L + D +SL+ L ++ + PIFPR Sbjct: 482 VFKQLNMNDPKLSQLESLESYGALTEPILVTEKPTPIFPRL 522 >gi|315660343|ref|ZP_07913196.1| methionine--tRNA ligase [Staphylococcus lugdunensis M23590] gi|315494632|gb|EFU82974.1| methionine--tRNA ligase [Staphylococcus lugdunensis M23590] Length = 657 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 219/521 (42%), Positives = 334/521 (64%), Gaps = 15/521 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTELEYLDDMIAGIKSLWSKLEISNDDFIRTTEQRHKQVVEKVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y GWYS+ DE YY + D +Y+ G+ ++ H V+ ++EE YFF +S Y D+L Sbjct: 123 YEGWYSVPDETYYTESQLVDPIYENGKIVGGKSPDSGHE-VELVKEESYFFNISKYTDRL 181 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 L +Y+ +P+FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL Sbjct: 182 LEFYDQNPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+++ GYL + D K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+HG+ Sbjct: 242 VNYISSLGYLSDDDALFQKYWPADVHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N DLA Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNLV+R++SMI K + G +P G E D+++ ++ +++ +NM++ AL Sbjct: 362 NDLGNLVNRTISMINKYFQGELPAYTGPKHELDDAMEALALETVKDFNDNMESFQFSVAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 A V L+S ++Y D PW L K + D + V+ +E IR +LL+ F+ + Sbjct: 422 ATVWKLISRTNKYIDETTPWVLAKDDSQKDMLANVMAHLIENIRFATVLLRPFLTHAPRE 481 Query: 473 IFDILFV-ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +F L + + E SL++ LK M+ + PIFPR Sbjct: 482 VFKQLNINSPELFELASLERYGALKQAVMVTEKPSPIFPRL 522 >gi|15923480|ref|NP_371014.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|15926167|ref|NP_373700.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315] gi|156978818|ref|YP_001441077.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|253316233|ref|ZP_04839446.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253735224|ref|ZP_04869389.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|255005283|ref|ZP_05143884.2| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|258429606|ref|ZP_05688280.1| methionyl-tRNA synthetase [Staphylococcus aureus A9299] gi|269202110|ref|YP_003281379.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282895097|ref|ZP_06303317.1| methionyl-tRNA synthetase [Staphylococcus aureus A8117] gi|296276555|ref|ZP_06859062.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1] gi|54039687|sp|P67579|SYM_STAAN RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|54042047|sp|P67578|SYM_STAAM RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|13700380|dbj|BAB41678.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315] gi|14246258|dbj|BAB56652.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|156720953|dbj|BAF77370.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|253726784|gb|EES95513.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|257849665|gb|EEV73632.1| methionyl-tRNA synthetase [Staphylococcus aureus A9299] gi|262074400|gb|ACY10373.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282762515|gb|EFC02655.1| methionyl-tRNA synthetase [Staphylococcus aureus A8117] Length = 657 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 219/523 (41%), Positives = 328/523 (62%), Gaps = 19/523 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE YY + ++ D QY N + + V+ ++EE YFF +S Y D Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +Y+ +P+FI P R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+H Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N D Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNLV+R++SM+ K +DG +P G E DE + ++ ++ E+M++ Sbjct: 360 LANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ V +S ++Y D PW L K + D V+ VE IR A+LL+ F+ Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479 Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510 +IF+ L + + F SL+Q L M+ PIFPR Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522 >gi|314937303|ref|ZP_07844645.1| methionine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] gi|313654599|gb|EFS18349.1| methionine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] Length = 659 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 222/524 (42%), Positives = 334/524 (63%), Gaps = 15/524 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + Sbjct: 1 MMAKETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQE 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ AG T ++D+ + + L+IS DDFIRTTE+RH +++++ +GDIY Sbjct: 61 KAQKAGKTELEYLDEMIAGIKRLWAKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYND----DEVY---KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173 G Y GWYS+ DE YY + D VY K A G+ ++ H V+ ++EE YFF ++ Y Sbjct: 121 LGEYEGWYSVPDETYYTESQLVDPVYENGKIAGGKSPDSGHE-VELVKEESYFFNINKYT 179 Query: 174 DKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 D+LL +Y+++P+FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWI Sbjct: 180 DRLLEFYDANPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWI 239 Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 DAL NY+++ GYL + D K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+ Sbjct: 240 DALVNYISSLGYLSDDDSLFQKYWPADVHLMAKEIVRFHSIIWPILLMALDLPLPKKVFA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N Sbjct: 300 HGWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNF 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN +GNLV+R++SMI K + G +P G E DE + ++ ++ +NM++ Sbjct: 360 DLANDLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEALALETVKNFHDNMESFQFS 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 AL+ V L+S ++Y D PW L K + D V+ VE IR +LL+ F+ Sbjct: 420 VALSTVWKLISRTNKYIDETTPWVLAKDESQKDMLGNVMAHLVENIRFATVLLRPFLTHA 479 Query: 470 ANKIFDILFVADENRC-FQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +IF L + + + SL+ L+ M+ + PIFPR Sbjct: 480 PKEIFKQLNINNSDLYELSSLEHYGALQEPIMVTEKPSPIFPRL 523 >gi|57651372|ref|YP_185421.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|88194248|ref|YP_499040.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151220665|ref|YP_001331487.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|221142318|ref|ZP_03566811.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258452829|ref|ZP_05700824.1| methionyl-tRNA synthetase [Staphylococcus aureus A5948] gi|262049975|ref|ZP_06022834.1| methionyl-tRNA synthetase [Staphylococcus aureus D30] gi|282925564|ref|ZP_06333217.1| methionyl-tRNA synthetase [Staphylococcus aureus A9765] gi|284023499|ref|ZP_06377897.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132] gi|304380506|ref|ZP_07363183.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|81695187|sp|Q5HII6|SYM_STAAC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|57285558|gb|AAW37652.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|87201806|gb|ABD29616.1| methionyl-tRNA synthetase, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150373465|dbj|BAF66725.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|257859515|gb|EEV82368.1| methionyl-tRNA synthetase [Staphylococcus aureus A5948] gi|259161910|gb|EEW46493.1| methionyl-tRNA synthetase [Staphylococcus aureus D30] gi|269940061|emb|CBI48437.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20] gi|282592468|gb|EFB97480.1| methionyl-tRNA synthetase [Staphylococcus aureus A9765] gi|302750380|gb|ADL64557.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340951|gb|EFM06874.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|320139424|gb|EFW31302.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131] gi|329313208|gb|AEB87621.1| Methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131] gi|329729770|gb|EGG66167.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189] Length = 657 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 219/523 (41%), Positives = 328/523 (62%), Gaps = 19/523 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE YY + ++ D QY N + + V+ ++EE YFF +S Y D Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +Y+ +P+FI P R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+H Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N D Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNLV+R++SM+ K +DG +P G E DE + ++ ++ E+M++ Sbjct: 360 LANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ V +S ++Y D PW L K + D V+ VE IR A+LL+ F+ Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479 Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510 +IF+ L + + F SL+Q L M+ PIFPR Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLNESIMVTGQPKPIFPRL 522 >gi|257427267|ref|ZP_05603668.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257275918|gb|EEV07386.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] Length = 657 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 220/523 (42%), Positives = 328/523 (62%), Gaps = 19/523 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGK 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE YY + ++ D QY N + + V+ ++EE YFF +S Y D Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +Y+ +P+FI P R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+H Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N D Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNLV+R++SMI K +DG +P G E DE + ++ ++ E+M++ Sbjct: 360 LANDLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ V +S ++Y D PW L K + D V+ VE IR A+LL+ F+ Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479 Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510 +IF+ L + + F SL+Q L M+ PIFPR Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTEPIMVTGQPKPIFPRL 522 >gi|239616428|ref|YP_002939750.1| methionyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] gi|239505259|gb|ACR78746.1| methionyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] Length = 639 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 206/509 (40%), Positives = 332/509 (65%), Gaps = 7/509 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K Y++T I Y N++PHIG AY I+AD++AR+ RL G DV F TGTDEHGQK+ +AA+ Sbjct: 2 KPKFYVTTPIYYINSEPHIGSAYTTIVADIVARYKRLSGYDVFFLTGTDEHGQKVLQAAK 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 + + + DQ + F+ + L I+ D F+RTT++RH T ++ KK+ + GD+YKG Sbjct: 62 EENLDPQTYSDQLAEKFKVLWKELQITNDYFVRTTDERHMKTVQLFVKKMLENGDVYKGK 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY + E ++ ++++ K + + V+W+ EE YFFRLS Y D LL +++ H Sbjct: 122 YEGWYCVPCETFWTEEDIGKE---RVCPSCGREVKWVSEENYFFRLSKYNDALLKHFQEH 178 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 PEF+ P RRNE++ +++GL+DLS++R +F WG+ +P+DP++++YVW+DAL NY++ G Sbjct: 179 PEFVQPDFRRNEMLRILENGLRDLSITRTSFKWGVPMPNDPEHVIYVWVDALINYISAIG 238 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y+D+P+ + ++WPAD+H+IGK+I RFH++ WPA L+S LPLPK++++HG++ G+KI Sbjct: 239 YIDDPE-TFHRYWPADVHIIGKEINRFHSLIWPAMLMSVGLPLPKQIYAHGWLTVNGQKI 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGN IDP E ++ G DA+RY+L+R+I G+DG + ++ L R+NADLAN +GNL+ Sbjct: 298 SKSLGNAIDPREFVKAYGNDAVRYYLLRDIQFGRDGDFSEENLVHRINADLANDLGNLLH 357 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+V+MI K +G++P G + D + + V+ E ++M N +L + Sbjct: 358 RTVAMIEKFNNGIVPKKGVVEDVDNQLYGLAEEVIAEYIDHMDNLRFTPSLDAIWRFARF 417 Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++Y D +PW+L K +R +TVLY V+ +R ++++++ +P A I + + A Sbjct: 418 GNKYIDLTEPWKLGKDPEKAERLNTVLYNLVDTLRIVSLMIEPVMPNTAKAIRERIGQAV 477 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 E F L L + K +P+FPR Sbjct: 478 E-LDFTHLKLGLTKNGVGVKHGEPLFPRI 505 >gi|49482717|ref|YP_039941.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|257424601|ref|ZP_05601029.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257429904|ref|ZP_05606290.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257432607|ref|ZP_05608969.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257435511|ref|ZP_05611561.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|282903075|ref|ZP_06310967.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|282904865|ref|ZP_06312725.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282907812|ref|ZP_06315650.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910128|ref|ZP_06317934.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282913317|ref|ZP_06321108.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282918271|ref|ZP_06326011.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282923022|ref|ZP_06330708.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|283957279|ref|ZP_06374737.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|293500366|ref|ZP_06666218.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|293509304|ref|ZP_06668020.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|293515893|ref|ZP_06670583.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|295427024|ref|ZP_06819661.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591600|ref|ZP_06950237.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|60390704|sp|Q6GJI1|SYM_STAAR RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|49240846|emb|CAG39513.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|257272628|gb|EEV04748.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257279420|gb|EEV10015.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257282472|gb|EEV12605.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257285148|gb|EEV15265.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|282314541|gb|EFB44928.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|282317837|gb|EFB48206.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282322788|gb|EFB53108.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282325976|gb|EFB56282.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282328288|gb|EFB58563.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331982|gb|EFB61491.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282596501|gb|EFC01461.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|283791203|gb|EFC30013.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|290921301|gb|EFD98359.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|291096326|gb|EFE26586.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|291467849|gb|EFF10359.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|295129027|gb|EFG58656.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575469|gb|EFH94186.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|312436421|gb|ADQ75492.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60] gi|315193851|gb|EFU24245.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00] Length = 657 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 220/523 (42%), Positives = 328/523 (62%), Gaps = 19/523 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE YY + ++ D QY N + + V+ ++EE YFF +S Y D Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +Y+ +P+FI P R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+H Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N D Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNLV+R++SMI K +DG +P G E DE + ++ ++ E+M++ Sbjct: 360 LANDLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ V +S ++Y D PW L K + D V+ VE IR A+LL+ F+ Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479 Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510 +IF+ L + + F SL+Q L M+ PIFPR Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTEPIMVTGQPKPIFPRL 522 >gi|289551711|ref|YP_003472615.1| Methionyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|289181242|gb|ADC88487.1| Methionyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] Length = 657 Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust. Identities = 220/521 (42%), Positives = 334/521 (64%), Gaps = 15/521 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTELEYLDDMIAGIKSLWSKLEISNDDFIRTTEQRHKQVVEKVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y GWYS+ DE YY + D +Y+ G+ ++ H V+ ++EE YFF +S Y D+L Sbjct: 123 YEGWYSVPDETYYTESQLVDPIYENGKIVGGKSPDSGHE-VELVKEESYFFNISKYTDRL 181 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 L +Y+ +P+FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL Sbjct: 182 LEFYDQNPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+++ GYL + D K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+HG+ Sbjct: 242 VNYISSLGYLSDDDALFQKYWPADVHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N DLA Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNLV+R++SMI K + G +P G E D+++ ++ +++ +NM++ AL Sbjct: 362 NDLGNLVNRTISMINKYFQGELPAYTGPKHELDDAMEALALETVKDFNDNMESFQFSVAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 A V L+S ++Y D PW L K + D + V+ VE IR +LL+ F+ + Sbjct: 422 ATVWKLISRTNKYIDETTPWVLAKDDSQKDMLANVMAHLVENIRFATVLLRPFLTHAPRE 481 Query: 473 IFDILFV-ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +F L + + E SL++ LK M+ + PIFPR Sbjct: 482 VFKQLNINSPELFELASLERYGALKQPVMVTEKPSPIFPRL 522 >gi|329731069|gb|EGG67441.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193] Length = 657 Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust. Identities = 219/523 (41%), Positives = 328/523 (62%), Gaps = 19/523 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE YY + ++ D QY N + + V+ ++EE YFF +S Y D Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +Y+ +P+FI P R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+H Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N D Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNLV+R++SM+ K +DG +P G E DE + ++ ++ E+M++ Sbjct: 360 LANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ V +S ++Y D PW L K + D V+ VE IR A+LL+ F+ Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479 Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510 +IF+ L + + F SL+Q L M+ PIFPR Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522 >gi|312897476|ref|ZP_07756900.1| methionyl-tRNA synthetase [Megasphaera micronuciformis F0359] gi|310621537|gb|EFQ05073.1| methionyl-tRNA synthetase [Megasphaera micronuciformis F0359] Length = 648 Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust. Identities = 216/479 (45%), Positives = 310/479 (64%), Gaps = 7/479 (1%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 KE++ YI+T I YP+A+ HIGH Y IAD LARFHRL G D LF TG+DEHGQKI +A Sbjct: 4 KEKKTYYITTPIYYPSAKLHIGHTYCTTIADSLARFHRLRGDDTLFITGSDEHGQKIQRA 63 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G+ +VD F+D+ L+IS D FIRTTE RH + L ++ D GDIYK Sbjct: 64 AEAQGMKPIEYVDGIVALFKDLWKRLNISNDVFIRTTEPRHERVVQDLMQRSFDNGDIYK 123 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180 Y GWY DE ++ ++++ DG++ P++ ++EE YF RL+ Y D+ L + Sbjct: 124 SEYEGWYCTPDETFWPENKL---PDGKHVCPDCGRPLELVKEESYFLRLNKYADRWLKFI 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E +P+FI P RRNE+I+FVKSGL+DLS+SR +FDWGIK+P DP++++YVW DAL NYLT Sbjct: 181 EENPDFIQPESRRNEMIAFVKSGLEDLSISRTSFDWGIKVPWDPKHVVYVWFDALANYLT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GYL++P+ KFWPA LH++GK+I+RFH I WP L+S LPLPKKVF HG+++ G Sbjct: 241 AAGYLEDPENFD-KFWPASLHLVGKEIVRFHTIIWPIMLMSCGLPLPKKVFGHGWLIVDG 299 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKSLGNV+DP+ +IE G DALRY+L++E+ G+DG + R+NADLAN +GN Sbjct: 300 TKMSKSLGNVVDPVPLIERYGADALRYYLLKEVRLGQDGNFSLPTFINRINADLANDLGN 359 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+ R+++M+ K DG++ P D+ + ++ +++ M + I AL + L Sbjct: 360 LLQRTLAMVEKYEDGVVAGPTDKEAVDDELAALAVETVRKFEAEMDDMKIDDALNDIWGL 419 Query: 421 VSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + ++Y D PW L K R TVLY +E +R +++L+ +P A ++ L Sbjct: 420 IRRSNKYIDETVPWVLAKDADCVGRLRTVLYNLMESLRIISVLVSPVIPASAENMWTQL 478 >gi|188997460|ref|YP_001931711.1| methionyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] gi|188932527|gb|ACD67157.1| methionyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] Length = 628 Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust. Identities = 225/513 (43%), Positives = 322/513 (62%), Gaps = 21/513 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y++T I Y N PH+GHAY + ADVLAR++R G+ F TGTDEHGQKI K A+ Sbjct: 2 QEKFYVTTPIYYVNDVPHLGHAYTTVAADVLARYYRQIGVKTFFLTGTDEHGQKIQKTAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ K D+ F+++ L+ISYD FIRTT+ H + +++K + GDIY Sbjct: 62 EKGISPKELADKTHLAFKELWKKLNISYDRFIRTTDPDHIKAVQHIFQKCYENGDIYLSE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y +Y + E + + E+ D Y H P + ++EE YFFRLS Y DKLL +YE Sbjct: 122 YESYYCVGCEEFKTETEI---KDYDYKCPIHLKPCEKVKEESYFFRLSKYTDKLLEFYEK 178 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLT 240 +PEFILP R+NEV+SFVK GLKDLS+SRK WGI +P DP + +YVW DALTNYLT Sbjct: 179 NPEFILPDFRKNEVVSFVKQGLKDLSVSRKRDRVAWGIPVPFDPSHTIYVWFDALTNYLT 238 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY +N + +FWPAD+H++GKDILRFHA+YWPAFL+SA L + KKVF+HG+ +G Sbjct: 239 AVGYPENLN----EFWPADVHIVGKDILRFHAVYWPAFLMSARLEISKKVFAHGWWTVEG 294 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKSLGNV+DP + +E GVD LRYFL+RE+ G DG + K + R+N+DLAN +GN Sbjct: 295 HKMSKSLGNVVDPFKAADEFGVDKLRYFLLREVPFGLDGDFSKSAVINRINSDLANDLGN 354 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+SRS++MI K +G I P F E +E +V S+ L+ + +Q ++L +V Sbjct: 355 LISRSLTMIHKFQNGKIEKPSVFKEIEEEYKNVYSKTLENYKNFIQKLEFSKSLEEVWQF 414 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 + +++Y +PW+L K + + T LY V+ I + +L F+P+ + +L + Sbjct: 415 IDWLNKYIVKVEPWKLNKEDKEYLKTTLYTVVDGIYAVVWMLNPFMPQKMAEALSMLNIN 474 Query: 481 DENRCFQSLDQRLKP-GFMLHKTFD---PIFPR 509 + + + +KP F + T + P+FPR Sbjct: 475 E-------IKKDIKPYSFPVEITINQVVPLFPR 500 >gi|170755122|ref|YP_001779702.1| methionyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] gi|169120334|gb|ACA44170.1| methionyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] Length = 645 Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust. Identities = 207/469 (44%), Positives = 311/469 (66%), Gaps = 7/469 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I YP+A+ HIG+ Y + AD LARF RL G DV+F TGTDEHGQKI + A+ V Sbjct: 7 YVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEAKKV 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K +VD+ +++ +++I YD FIRTT++ H + + ++K + DKGDIYK YSGW Sbjct: 67 TPKAYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGW 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + PV+ +EE YFF++S Y KL+ Y ESHPEFI Sbjct: 127 YCTPCESFWTETQL---EDGKCPDCGR-PVEKAKEEAYFFKMSKYAPKLIEYIESHPEFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R+NE+++ F+K GL+DL +SR +FDWGI + D ++++YVWIDAL NY+T GY Sbjct: 183 QPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYNT 242 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D K+WPAD+H++GKDILRFH IYWP L++ ++PLPK+VF HG++L G K+SKS Sbjct: 243 EKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGGKMSKS 302 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNV+DP+ ++ G D +RY+L+REI G DG ++ + K++N+DLAN +GNL+SR+V Sbjct: 303 KGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNLLSRTV 362 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +MI K +DG IP + DE ++ + +++ ENM I AL ++ + + ++ Sbjct: 363 AMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEENMGKLRIPEALEEIWTFIGRANK 422 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 Y D PW L K + +R TVLY E +R +++ + AF+P+ + KI Sbjct: 423 YIDETTPWILAKDESKKERLGTVLYNLAESLRIISVCILAFIPETSIKI 471 >gi|283469782|emb|CAQ48993.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398] Length = 657 Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust. Identities = 220/523 (42%), Positives = 328/523 (62%), Gaps = 19/523 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE YY + ++ D QY N + + V+ ++EE YFF +S Y D Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHQVELVKEESYFFNISKYTD 179 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +Y+ +P+FI P R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+H Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N D Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNLV+R++SMI K +DG +P G E DE + ++ ++ E+M++ Sbjct: 360 LANDLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ V +S ++Y D PW L K + D V+ VE IR A+LL+ F+ Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479 Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510 +IF+ L + + F SL+Q L M+ PIFPR Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTEPIMVTGQPKPIFPRL 522 >gi|15896243|ref|NP_349592.1| methionyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|25009386|sp|Q97EW5|SYM_CLOAB RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|15026047|gb|AAK80932.1|AE007796_2 Methionyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|325510398|gb|ADZ22034.1| methionyl-tRNA synthetase [Clostridium acetobutylicum EA 2018] Length = 644 Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust. Identities = 211/476 (44%), Positives = 309/476 (64%), Gaps = 7/476 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++K YI+T I YP+A+ HIG+ Y + +D L RF RL G D TGTDEHGQKI + Sbjct: 1 MSEKKKFYITTPIYYPSAKLHIGNTYTTVASDALVRFKRLQGYDAFMLTGTDEHGQKIQR 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A++ G+T K +VD+ +D+ +++ISYD FIRTT++ H + + KK D GDIY Sbjct: 61 IAEDKGITPKAYVDEIVAGIKDLWKMMNISYDKFIRTTDEEHVKAVQKIVKKFYDNGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y GWY E+++ + ++ DG+ + PV+ +EE YFF++S Y D+L+ Y Sbjct: 121 KSAYEGWYCTPCESFWTETQL---VDGKCPDCGR-PVEKTKEEAYFFKMSKYADRLIKYI 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 E HP+FI P R+NE+++ F+K GL+DL +SR +FDWGI I D ++++YVWIDAL+NY+ Sbjct: 177 EDHPDFIQPESRKNEMLNNFLKPGLQDLCISRSSFDWGIPITFDEKHVIYVWIDALSNYI 236 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T GY + D KFWPADLH++GKDI+RFH IYWP L++ +LPLPK+VF HG++L Sbjct: 237 TALGYGSDNDELYNKFWPADLHLVGKDIIRFHTIYWPIMLMALDLPLPKQVFGHGWLLVD 296 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKS GNV+DP+ +I E G D +RY+L+ EI G DG ++ + K++N+DLAN +G Sbjct: 297 GGKMSKSKGNVVDPVVLINEFGTDPVRYYLLHEIPFGSDGLFNNEIFIKKINSDLANDLG 356 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLVSR+ +MI K +DG I P E D ++ + + +++ E+++ I AL + Sbjct: 357 NLVSRTAAMIEKYFDGSIQPPVDKEEIDNELIDMAISLPEKLDEDIKKLKIPEALDHIWD 416 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473 L+ ++Y D PW L K +A TVLY VE +R +A L F+P+ KI Sbjct: 417 LIKRANKYIDETTPWVLAKDENKKARLGTVLYNLVESLRFVATTLTPFLPETGEKI 472 >gi|242371680|ref|ZP_04817254.1| methionyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] gi|242350629|gb|EES42230.1| methionyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] Length = 656 Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust. Identities = 219/521 (42%), Positives = 331/521 (63%), Gaps = 15/521 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + D L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTELEYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y GWYS+ DE YY + D VY+ G+ ++ H V+ ++EE YFF ++ Y D+L Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGKIVGGKSPDSGHE-VELVKEESYFFNINKYTDRL 181 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 L +Y+ +P+FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL Sbjct: 182 LEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+++ GYL + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+HG+ Sbjct: 242 VNYISSLGYLSEDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N DLA Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNLV+R++SMI K + G +P G E DE + ++ ++ ENM++ AL Sbjct: 362 NDLGNLVNRTISMINKYFHGELPAYQGPKHELDEDMEAMALETVKNFNENMESLQFSVAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + V +S ++Y D +PW L K + D V+ VE IR A+LLQ F+ + Sbjct: 422 STVWKFISRTNKYIDETQPWVLAKDESQRDMLGNVMAHLVENIRFSAVLLQPFLTHAPRE 481 Query: 473 IFDILFVADENRC-FQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +F L + + +SL+ L M+ + PIFPR Sbjct: 482 MFKQLNINNPKLTELESLESYGALTEPIMVTEKPSPIFPRL 522 >gi|70727520|ref|YP_254436.1| methionyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] gi|82582279|sp|Q4L3E7|SYM_STAHJ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|68448246|dbj|BAE05830.1| methionyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] Length = 659 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 221/522 (42%), Positives = 333/522 (63%), Gaps = 17/522 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV++R+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVISRYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + L+IS DDFIRTTE RH +++++ +GDIY G Sbjct: 63 KAGKTELEYLDEMISGIKSLWSKLEISNDDFIRTTEDRHKQVVEKVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y GWYS+ DE YY + D +Y+ G+ ++ H V+ ++EE YFF ++ Y D+L Sbjct: 123 YEGWYSVPDETYYTESQLVDPIYENGKIVGGKSPDSGHE-VELVKEESYFFNINKYTDRL 181 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 L +Y+++P+FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL Sbjct: 182 LEFYDANPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY++ GYL + D K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+HG+ Sbjct: 242 VNYISALGYLSDDDELFQKYWPADVHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N DLA Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNLV+R++SMI K + G +P G E DE + ++ ++ E+M++ AL Sbjct: 362 NDLGNLVNRTISMINKYFQGELPAYEGPKHELDEDMEALAHETVKHFNESMESFQFSVAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + V +S ++Y D PW L K + D V+ VE IR A+LL+ F+ + Sbjct: 422 STVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRFAAVLLRPFLTHAPKE 481 Query: 473 IFDILFVADENRCF--QSLDQ--RLKPGFMLHKTFDPIFPRF 510 IF L + +E F +SL+Q LK M+ + PIFPR Sbjct: 482 IFKQLNI-NEPELFELESLEQYGALKQPIMVTEKPTPIFPRL 522 >gi|282915808|ref|ZP_06323576.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|283768925|ref|ZP_06341834.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] gi|282320299|gb|EFB50641.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|283461106|gb|EFC08192.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] Length = 657 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 220/523 (42%), Positives = 328/523 (62%), Gaps = 19/523 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE YY + ++ D QY N + + V+ ++EE YFF +S Y D Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +Y+ +P+FI P R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+H Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N D Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNLV+R++SMI K +DG +P G E DE + ++ ++ E+M++ Sbjct: 360 LANDLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ V +S ++Y D PW L K + D V+ VE IR A+LL+ F+ Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479 Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510 +IF+ L + + F SL+Q L M+ PIFPR Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTVPIMVTGQPKPIFPRL 522 >gi|148266948|ref|YP_001245891.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|150392994|ref|YP_001315669.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|257794269|ref|ZP_05643248.1| methionyl-tRNA synthetase [Staphylococcus aureus A9781] gi|258407213|ref|ZP_05680358.1| methionyl-tRNA synthetase [Staphylococcus aureus A9763] gi|258420820|ref|ZP_05683756.1| methionyl-tRNA synthetase [Staphylococcus aureus A9719] gi|258446123|ref|ZP_05694284.1| methionyl-tRNA synthetase [Staphylococcus aureus A6300] gi|258453822|ref|ZP_05701795.1| methionyl-tRNA synthetase [Staphylococcus aureus A5937] gi|295407379|ref|ZP_06817176.1| methionyl-tRNA synthetase [Staphylococcus aureus A8819] gi|297246459|ref|ZP_06930299.1| methionyl-tRNA synthetase [Staphylococcus aureus A8796] gi|147740017|gb|ABQ48315.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|149945446|gb|ABR51382.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|257788241|gb|EEV26581.1| methionyl-tRNA synthetase [Staphylococcus aureus A9781] gi|257841171|gb|EEV65620.1| methionyl-tRNA synthetase [Staphylococcus aureus A9763] gi|257843212|gb|EEV67625.1| methionyl-tRNA synthetase [Staphylococcus aureus A9719] gi|257855100|gb|EEV78042.1| methionyl-tRNA synthetase [Staphylococcus aureus A6300] gi|257863993|gb|EEV86748.1| methionyl-tRNA synthetase [Staphylococcus aureus A5937] gi|285816189|gb|ADC36676.1| Methionyl-tRNA synthetase [Staphylococcus aureus 04-02981] gi|294967736|gb|EFG43768.1| methionyl-tRNA synthetase [Staphylococcus aureus A8819] gi|297176646|gb|EFH35908.1| methionyl-tRNA synthetase [Staphylococcus aureus A8796] gi|315128616|gb|EFT84619.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03] gi|329725056|gb|EGG61551.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172] Length = 657 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 218/523 (41%), Positives = 328/523 (62%), Gaps = 19/523 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE YY + ++ D QY N + + V+ ++EE YFF +S Y D Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +Y+ +P+FI P R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY++ GYL + + ++WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+H Sbjct: 240 ALVNYISALGYLSDDESLFNRYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N D Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNLV+R++SM+ K +DG +P G E DE + ++ ++ E+M++ Sbjct: 360 LANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ V +S ++Y D PW L K + D V+ VE IR A+LL+ F+ Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479 Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510 +IF+ L + + F SL+Q L M+ PIFPR Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522 >gi|47092860|ref|ZP_00230643.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|47018764|gb|EAL09514.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] Length = 630 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 217/490 (44%), Positives = 324/490 (66%), Gaps = 13/490 (2%) Query: 34 LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93 +AR+ RL G DV + TGTDEHGQKI A+ G++ + +VD+ + F+++ L+IS D Sbjct: 1 MARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDEIAEGFQELWKKLEISNTD 60 Query: 94 FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND---DEVYKGADGQYY 150 FIRTT+ RH + +++++ ++GDIY G Y GWYS+ DE Y+ + +EVYK +G+ Sbjct: 61 FIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEYFTETQLEEVYKDENGKVI 120 Query: 151 NAQH---NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKD 206 + N V+ ++EE YFFR+S Y D+L+ YY SHPEFILP R+NE+I+ F+K GL+D Sbjct: 121 GGKAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILPESRKNEMINNFIKPGLED 180 Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266 L++SR TFDWGIK+P +P++++YVWIDAL+NY+T GY + D K+WPAD+ ++GK+ Sbjct: 181 LAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITALGYNTDNDTKFQKYWPADVQIVGKE 240 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+RFH IYWP L++ +LPLPK VF HG+IL K K+SKS GNV+DP +I+ G+DALR Sbjct: 241 IVRFHTIYWPIMLMALDLPLPKMVFGHGWILMKDGKMSKSKGNVVDPYMLIDRYGLDALR 300 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTE 385 Y+L+RE+ G DG + + RVN DLAN +GNL++R+V+MI K +DG IP G TE Sbjct: 301 YYLLREVPFGSDGLFTPEDFVDRVNFDLANDLGNLLNRTVAMINKYFDGEIPAYQGNVTE 360 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA- 444 D++++ + V++E +M + AL Q+ SL+S ++Y D PW L K R Sbjct: 361 FDQTLVDFKNNVVKEYEGSMDHMQFSVALNQLWSLISRTNKYIDETAPWTLAKDEDKRTE 420 Query: 445 -STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN-RCFQSL--DQRLKPGFMLH 500 ++V+ E +R +A+LLQ F+ + +IF L + +EN + + S+ + G + Sbjct: 421 LASVMTHLAENLRIIAVLLQPFLTRTPGEIFLQLGLQEENLKKWDSIYGYGEIPAGTTVV 480 Query: 501 KTFDPIFPRF 510 K PIFPR Sbjct: 481 KKGTPIFPRL 490 >gi|228476230|ref|ZP_04060933.1| methionine--tRNA ligase [Staphylococcus hominis SK119] gi|228269715|gb|EEK11214.1| methionine--tRNA ligase [Staphylococcus hominis SK119] Length = 658 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 221/521 (42%), Positives = 333/521 (63%), Gaps = 15/521 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTELEYLDEMIAGIKRLWAKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYND----DEVY---KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y GWYS+ DE YY + D VY K A G+ ++ H V+ ++EE YFF ++ Y D+L Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGKIAGGKSPDSGHE-VELVKEESYFFNINKYTDRL 181 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 L +Y+++P+FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL Sbjct: 182 LEFYDANPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+++ GYL + D K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+HG+ Sbjct: 242 VNYISSLGYLSDDDSLFQKYWPADVHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N DLA Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNLV+R++SMI K + G +P G E DE + ++ ++ +NM++ AL Sbjct: 362 NDLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEALALETVKNFHDNMESFQFSVAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + V L+S ++Y D PW L K + D V+ VE IR +LL+ F+ + Sbjct: 422 STVWKLISRTNKYIDETTPWVLAKDESQKDMLGNVMAHLVENIRFATVLLRPFLTHAPKE 481 Query: 473 IFDILFVADENRC-FQSLDQ--RLKPGFMLHKTFDPIFPRF 510 IF L + + + SL+ L+ M+ + PIFPR Sbjct: 482 IFKQLNINNSDLYELSSLEHYGALQEPIMVTEKPSPIFPRL 522 >gi|258513470|ref|YP_003189692.1| methionyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] gi|257777175|gb|ACV61069.1| methionyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] Length = 533 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 220/527 (41%), Positives = 327/527 (62%), Gaps = 24/527 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + YIST I YP+ + HIGHAY + AD AR+ R+ G DV F TG+DEHGQKI + A+ Sbjct: 3 KPTFYISTPIYYPSDKLHIGHAYTTVAADSFARYKRMKGYDVWFLTGSDEHGQKIERTAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G + +VDQ F+ + LD+SYDDFIRTT++RH + +++K+ D+GDIYK Sbjct: 63 EKGQSPLEYVDQIVAGFKSLWKKLDVSYDDFIRTTQERHKKVVQDIFQKLYDQGDIYKAQ 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E ++ + ++ ADG + PV+ ++EE YFF++S Y D++L Y E + Sbjct: 123 YEGHYCTPCETFWTEYQL--DADGNCPDCGR-PVEILQEESYFFKMSKYADEILKYIEDN 179 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 EFI P RRNE++SF+KSGL DL +SR TFDWGI++P DP++++YVW+DALTNY++ G Sbjct: 180 AEFIQPNSRRNEMVSFIKSGLADLCVSRTTFDWGIQVPFDPKHVIYVWVDALTNYISALG 239 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D K+WPAD+H++GKDI+RFH I WP L++A + LPK+V HG++L K+ Sbjct: 240 YGTGDDSLFRKYWPADMHLVGKDIVRFHTIIWPIMLMAAGIELPKQVLGHGWLLLDSGKM 299 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP+E+ ++ GVDA+RY+L+RE+ G DG+Y ++ L R+N DLAN +GNL+S Sbjct: 300 SKSKGNVVDPLELCDKYGVDAIRYYLLRELPLGSDGYYSEEALVNRINIDLANDLGNLIS 359 Query: 364 RSVSMILKDYDGMIPTPGAFTE---------------SDESILSVCSRVLQEIRENMQNQ 408 RS SMI+K G++ P E D ++S+ + E+ + M+ + Sbjct: 360 RSTSMIVKFSKGVLEEPETPREPVLLEQYLGSEEAPAEDRDLISLALKTKYEVDDLMERR 419 Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAF 465 I ALA V LV ++Y + PW L K +P+ R +TVLY E IR + +++ F Sbjct: 420 DISGALAAVWRLVGRANKYVEETSPWSLAK-DPELRGRLATVLYNLAETIRFVTVMVTPF 478 Query: 466 VPKLANKIFDILFVAD--ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 +P + ++ L + + E +++L+ P D IFPR Sbjct: 479 MPNFPSMVWQQLAIGNQPELHVWEALEWGNLPAGTRVVKGDAIFPRI 525 >gi|87162044|ref|YP_493176.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|161508736|ref|YP_001574395.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|294850349|ref|ZP_06791082.1| metS [Staphylococcus aureus A9754] gi|87128018|gb|ABD22532.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|160367545|gb|ABX28516.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|294822773|gb|EFG39209.1| metS [Staphylococcus aureus A9754] gi|315196171|gb|EFU26527.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01] gi|320144201|gb|EFW35969.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177] Length = 657 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 218/523 (41%), Positives = 328/523 (62%), Gaps = 19/523 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 +G T ++D+ + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KSGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE YY + ++ D QY N + + V+ ++EE YFF +S Y D Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +Y+ +P+FI P R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+H Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N D Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNLV+R++SM+ K +DG +P G E DE + ++ ++ E+M++ Sbjct: 360 LANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ V +S ++Y D PW L K + D V+ VE IR A+LL+ F+ Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479 Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510 +IF+ L + + F SL+Q L M+ PIFPR Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLNESIMVTGQPKPIFPRL 522 >gi|160933682|ref|ZP_02081070.1| hypothetical protein CLOLEP_02543 [Clostridium leptum DSM 753] gi|156867559|gb|EDO60931.1| hypothetical protein CLOLEP_02543 [Clostridium leptum DSM 753] Length = 650 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 217/513 (42%), Positives = 324/513 (63%), Gaps = 10/513 (1%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++ YI+T I YP+ + HIGH+Y + D +AR+ R+ G DV+F TGTDEHGQKI A Sbjct: 2 DQKTFYITTPIYYPSGKAHIGHSYCTVATDAIARYKRMQGYDVMFLTGTDEHGQKIELNA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AGVT K +VD+ F+++ +L+IS D FIRTT+ H + ++K++ D+G+IYKG Sbjct: 62 AKAGVTPKEYVDEIVAGFQELWKLLNISNDRFIRTTDDYHVKAVQKIFKELYDRGEIYKG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E+++ + ++ DG+ + V+W EEE YFF+L Y D+LL YE Sbjct: 122 KYEGWYCTPCESFWTETQL---KDGKCPDCGRE-VKWAEEEAYFFKLGNYADRLLKLYED 177 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI P R+NE+I F+K+GL DL +SR +F WGI + DP++++YVW+DALTNY+T Sbjct: 178 QPDFIQPESRKNEMIQFIKNGLDDLCVSRTSFTWGIPVDFDPKHVVYVWLDALTNYITAM 237 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GE 301 GY D K+WPAD+H IGK+I+RFH I WPA L++ +LPLPK+V+ HG++L G Sbjct: 238 GYGSGDDSDYRKYWPADVHFIGKEIVRFHTIIWPAILMALDLPLPKQVYGHGWLLFGDGS 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP+ + + GVDA+RYFL+REI G DG + + L R+N DLAN +GNL Sbjct: 298 KMSKSKGNVVDPVILCDRYGVDAIRYFLLREIPFGADGLFTNEALINRINYDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 +SR+ +M+ K + G IP + D+ ++++ + + E+M ALA+V L+ Sbjct: 358 LSRTTAMVQKYFGGSIPAQRQAEDLDQDLVAMATSLRGRYEESMDGFQFSNALAEVWKLI 417 Query: 422 SEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 + ++Y D PW L K PD+A + VLY E +R ++IL+ F+P+ A KI + Sbjct: 418 ARSNKYIDETMPWALGKA-PDKAPRLAAVLYNLCECLRIVSILITPFMPETAPKIQAQIG 476 Query: 479 VADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510 + + S DQ L P + + +FPR Sbjct: 477 AGADVCNWDSADQWGLLPADAVVSKGETLFPRI 509 >gi|323438722|gb|EGA96462.1| methionyl-tRNA synthetase [Staphylococcus aureus O11] gi|323442066|gb|EGA99701.1| methionyl-tRNA synthetase [Staphylococcus aureus O46] Length = 657 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 220/523 (42%), Positives = 327/523 (62%), Gaps = 19/523 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE YY + ++ D QY N + + V+ ++EE YFF +S Y D Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +Y+ +P+FI P R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY++ GYL + + K+WPAD+H++ K+I+RFH+I WP L+ +LPLPKKVF+H Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMVLDLPLPKKVFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N D Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNLV+R++SMI K +DG +P G E DE + ++ ++ E+M++ Sbjct: 360 LANDLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ V +S ++Y D PW L K + D V+ VE IR A+LL+ F+ Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479 Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510 +IF+ L + + F SL+Q L M+ PIFPR Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTEPIMVTGQPKPIFPRL 522 >gi|69248667|ref|ZP_00604797.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta subunit, C-terminal [Enterococcus faecium DO] gi|227552442|ref|ZP_03982491.1| methionine--tRNA ligase [Enterococcus faecium TX1330] gi|257880089|ref|ZP_05659742.1| methionyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257885518|ref|ZP_05665171.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|257888319|ref|ZP_05667972.1| methionyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257891180|ref|ZP_05670833.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257893993|ref|ZP_05673646.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|257896791|ref|ZP_05676444.1| methionyl-tRNA synthetase [Enterococcus faecium Com12] gi|260560302|ref|ZP_05832478.1| methionyl-tRNA synthetase [Enterococcus faecium C68] gi|293378577|ref|ZP_06624740.1| methionine--tRNA ligase [Enterococcus faecium PC4.1] gi|293557282|ref|ZP_06675829.1| methionyl-tRNA synthetase [Enterococcus faecium E1039] gi|293563094|ref|ZP_06677560.1| methionyl-tRNA synthetase [Enterococcus faecium E1162] gi|293567520|ref|ZP_06678865.1| methionyl-tRNA synthetase [Enterococcus faecium E1071] gi|294623374|ref|ZP_06702233.1| methionyl-tRNA synthetase [Enterococcus faecium U0317] gi|314940236|ref|ZP_07847409.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|314941705|ref|ZP_07848584.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|314947651|ref|ZP_07851060.1| methionyl-tRNA synthetase [Enterococcus faecium TX0082] gi|314950637|ref|ZP_07853717.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|314992496|ref|ZP_07857917.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|314996350|ref|ZP_07861403.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|68194356|gb|EAN08866.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta subunit, C-terminal [Enterococcus faecium DO] gi|227178417|gb|EEI59389.1| methionine--tRNA ligase [Enterococcus faecium TX1330] gi|257814317|gb|EEV43075.1| methionyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257821374|gb|EEV48504.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|257824373|gb|EEV51305.1| methionyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257827540|gb|EEV54166.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257830372|gb|EEV56979.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|257833356|gb|EEV59777.1| methionyl-tRNA synthetase [Enterococcus faecium Com12] gi|260073647|gb|EEW61973.1| methionyl-tRNA synthetase [Enterococcus faecium C68] gi|291589763|gb|EFF21566.1| methionyl-tRNA synthetase [Enterococcus faecium E1071] gi|291597221|gb|EFF28413.1| methionyl-tRNA synthetase [Enterococcus faecium U0317] gi|291600569|gb|EFF30874.1| methionyl-tRNA synthetase [Enterococcus faecium E1039] gi|291605008|gb|EFF34476.1| methionyl-tRNA synthetase [Enterococcus faecium E1162] gi|292642906|gb|EFF61053.1| methionine--tRNA ligase [Enterococcus faecium PC4.1] gi|313589493|gb|EFR68338.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|313592956|gb|EFR71801.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|313597184|gb|EFR76029.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|313599477|gb|EFR78320.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|313640556|gb|EFS05136.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|313645892|gb|EFS10472.1| methionyl-tRNA synthetase [Enterococcus faecium TX0082] Length = 669 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 217/521 (41%), Positives = 324/521 (62%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+E YI+T I YP+ + HIG++Y I D +AR+ RL G DV + TG DEHGQKI Sbjct: 1 MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIET 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GV + +VD+ + + + + LDISYD FIRTT+ H + ++ ++ ++GDIY Sbjct: 61 KAEELGVKPQEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE ++ + EVYK +G + + V+ ++EE YFFR+S Y D Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YYE HPEFI P R+NE+I+ F+K GL+DL++SR TF WG+ + DP++++YVWID Sbjct: 181 RLLEYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPKKVF H Sbjct: 241 ALSNYITALGYGSEDESLFEKYWPADVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + RVN D Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAVPFGSDGVFTPEDFVSRVNYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG++P + T D + + + V+ + M+ + Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASLVTPFDSELSTTAANVVGRYHDAMEKMEFNT 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 ALA++ L+S ++Y D +PW L K +A ++V+ E +R AILLQ + + Sbjct: 421 ALAEIWVLISRANKYIDETEPWVLAKDEEKKAELNSVMIHLAESLRIAAILLQPIMTETP 480 Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 KIF+ L + E + L G + PIFPR Sbjct: 481 EKIFNQLGLDSETMNLEGLHFGEFPSGTKVVAKGTPIFPRL 521 >gi|257882321|ref|ZP_05661974.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257817979|gb|EEV45307.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,502] Length = 669 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 217/521 (41%), Positives = 324/521 (62%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+E YI+T I YP+ + HIG++Y I D +AR+ RL G DV + TG DEHGQKI Sbjct: 1 MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIET 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GV + +VD+ + + + + LDISYD FIRTT+ H + ++ ++ ++GDIY Sbjct: 61 KAEELGVKPQEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE ++ + EVYK +G + + V+ ++EE YFFR+S Y D Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YYE HPEFI P R+NE+I+ F+K GL+DL++SR TF WG+ + DP++++YVWID Sbjct: 181 RLLEYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPKKVF H Sbjct: 241 ALSNYITALGYGSEDESLFEKYWPADVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + RVN D Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAVPFGSDGVFTPEDFVSRVNYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG++P + T D + + + V+ + M+ + Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASLVTPFDSELSTTAANVVGRYHDAMEKTEFNT 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 ALA++ L+S ++Y D +PW L K +A ++V+ E +R AILLQ + + Sbjct: 421 ALAEIWVLISRANKYIDETEPWVLAKDEEKKAELNSVMIHLAESLRIAAILLQPIMTETP 480 Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 KIF+ L + E + L G + PIFPR Sbjct: 481 EKIFNQLGLDSETMNLEGLHFGEFPSGTKVVAKGTPIFPRL 521 >gi|88607461|ref|YP_505630.1| methionyl-tRNA synthetase [Anaplasma phagocytophilum HZ] gi|88598524|gb|ABD43994.1| methionyl-tRNA synthetase [Anaplasma phagocytophilum HZ] Length = 513 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 222/508 (43%), Positives = 320/508 (62%), Gaps = 13/508 (2%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T I Y N PHIGH Y +I+DVLARF RLDG +V FTTGTDEHGQKI + A+ G Sbjct: 8 VTTPIYYVNDVPHIGHFYTTLISDVLARFKRLDGDNVKFTTGTDEHGQKIEETARKRGTP 67 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 FVD+ S +FR++ DDFIRTTE RH D LW ++ +G IYKG Y+G+Y Sbjct: 68 VLQFVDEVSESFRELVHKSGFCADDFIRTTESRHKDAVVALWDRLYSRGQIYKGSYAGFY 127 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 S+RDE +Y + ++ DG+ V W+EE GYFF+LS +Q+ LL Y+ +P F++ Sbjct: 128 SVRDETFYQERDL---IDGKAPTGAE--VTWLEEPGYFFKLSEWQEALLQLYQDNPRFVV 182 Query: 189 PIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P + +EVISFVKSGL+DLS+SR WGI +P DP++++YVW+DAL+NYL G+ + Sbjct: 183 PEGKLSEVISFVKSGLRDLSVSRSKAHLSWGIGVPGDPEHLIYVWVDALSNYLALVGFPN 242 Query: 247 NPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 FW + +HV+GKDIL+FHA+YWPA L++A LPLPK+V +HG+ L++G+K Sbjct: 243 EDAEDYNNFWCGENSHVVHVVGKDILKFHAVYWPALLMAAGLPLPKQVVAHGWWLNEGQK 302 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 ISKSLGNVI P+ +I E G+D +RYFL+ E G D + LK+RVN DLAN IGNLV Sbjct: 303 ISKSLGNVICPLTIINEYGLDNVRYFLLSETPIGNDASFSAKRLKERVNCDLANNIGNLV 362 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R+V+++ K +G +P+ + L +L++ R ++ + AL +I + S Sbjct: 363 QRTVTLVHKWCEGKVPSVDMKLMCGDEALPDYQGILEQYRVYVEERRFFEALKFIIGVSS 422 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + Y + PW+L K + A VL+ +E I+ + +LLQ F+P + K+ + + V E Sbjct: 423 TANEYIAVKAPWKLFKEDTALAEAVLFKLLEYIKCIGLLLQPFLPVTSEKLLEQIAVPVE 482 Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 R F+ + + L G +L K PIF +F Sbjct: 483 KRKFEHIAE-LCTGRVLPKAV-PIFSKF 508 >gi|258424475|ref|ZP_05687354.1| methionyl-tRNA synthetase [Staphylococcus aureus A9635] gi|257845344|gb|EEV69379.1| methionyl-tRNA synthetase [Staphylococcus aureus A9635] Length = 657 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 219/523 (41%), Positives = 328/523 (62%), Gaps = 19/523 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + L+IS DDFIRTT++RH +++++ +GDIY G Sbjct: 63 KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTKERHKHVVEQVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE YY + ++ D QY N + + V+ ++EE YFF +S Y D Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +Y+ +P+FI P R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+H Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N D Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNLV+R++SMI K +DG +P G E DE + ++ ++ E+M++ Sbjct: 360 LANDLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ V +S ++Y D PW L K + D V+ VE IR A+LL+ F+ Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479 Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510 +IF+ L + + F SL+Q L M+ PIFPR Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTEPIMVTGQPKPIFPRL 522 >gi|88608152|ref|YP_506759.1| methionyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] gi|88600321|gb|ABD45789.1| methionyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] Length = 503 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 214/507 (42%), Positives = 317/507 (62%), Gaps = 14/507 (2%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + Y++T + Y N PHIGHAY +IADVL R RL G +V FTTGTDEHGQK+ A+ Sbjct: 2 RYYVTTPVYYVNDNPHIGHAYSSLIADVLTRALRLAGHEVRFTTGTDEHGQKVQNTAKKH 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G FV+ SR FRD+ + + DFIRTTE RH + + LW +S I G YS Sbjct: 62 GKCEIDFVNHVSRRFRDLCVAMHYDFSDFIRTTETRHKEAVQTLWSTLSKNNSISLGEYS 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWYS RDEA+Y + E+ +PV W +E YFF+LS + + L Y +P Sbjct: 122 GWYSERDEAFYTEAELQNS-----LAPTGSPVSWTKEACYFFKLSQFSEPLKKLYAENPT 176 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P R NE+++F+ +G+ DLS+SR WGI +PD+P + +YVW+DALTNY+++ GY Sbjct: 177 FIQPKSRFNEMLAFLNTGMHDLSISRTRVQWGINVPDNPTHTVYVWLDALTNYISSVGYP 236 Query: 246 D-NPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 + + D + FW +H+IGKDILRFH+IYWPAFL +ANL P + +HG+ L+ GEK Sbjct: 237 NTSADSLFSAFWDNARIIHIIGKDILRFHSIYWPAFLTAANLKTPDVILAHGWWLNDGEK 296 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 ISKSLGN+IDP E+I E GVD +RYF +REI GKDG + K LK+R+N++LA+ IGNL+ Sbjct: 297 ISKSLGNIIDPFELISEFGVDPVRYFFIREITVGKDGNFSKVNLKERINSELADNIGNLL 356 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R++++ K + P ES+ +L + E + +++ ++ +L ++I L + Sbjct: 357 HRTLTLTAK---LLGPKVSEIYESENELLEFAYSLATEYKNDIELLDLNSSLDRIIQLSN 413 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + + Y ++PW+LK+ P+ A +L+ +E +R +AI LQ FVP+ A+ + D+L V E Sbjct: 414 KANEYISMEEPWKLKE-KPETAGRILHSVLEALRIIAIGLQPFVPQSASTMLDLLAVPPE 472 Query: 483 NRCFQSLDQ--RLKPGFMLHKTFDPIF 507 R ++++ R++PG + P+F Sbjct: 473 ERKLANMNKESRIRPGTQIKLPASPLF 499 >gi|77919292|ref|YP_357107.1| methionyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] gi|77545375|gb|ABA88937.1| methionyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] Length = 511 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 215/512 (41%), Positives = 322/512 (62%), Gaps = 17/512 (3%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + Y++T I Y N PHIGHAY + D+LAR+ R G +V F TGTDEHGQK+ KAAQ Sbjct: 4 RFYVTTPIYYVNDVPHIGHAYTTVACDMLARYKRAQGQEVFFLTGTDEHGQKVEKAAQAK 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T D+ + ++ + + L+IS+ DFIRT+++RH L++K+ GDIY G Y Sbjct: 64 GETPLELADRVVKRYQALWEKLNISHTDFIRTSQERHKKGVCDLFEKLHATGDIYLGEYE 123 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 WY E ++ + ++ G P ++EE YFFR+S YQD+LL + E +P+ Sbjct: 124 DWYCTPCETFWTETQLMDGCCPDC----GRPTDKLKEESYFFRMSKYQDQLLKHIEENPD 179 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RRNE+++FV+ GL+DLS+SR +F WGI +P + ++++YVW DALTNY+T GY Sbjct: 180 FIQPRSRRNEILNFVREGLRDLSISRTSFSWGIPVPGNERHVIYVWFDALTNYITALGYP 239 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D+P+G FWPA++H+IGKDILRFH +YWP FLL+A LPLP KVF+HG+ +G+K+SK Sbjct: 240 DDPEGHYKNFWPANVHIIGKDILRFHTVYWPTFLLAAGLPLPAKVFAHGWWTVEGQKMSK 299 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SL NV++P ++++ GVDA+RYFL+RE+ G DG + L R+N+DLAN +GNLVSRS Sbjct: 300 SLQNVVEPNMLVDKYGVDAIRYFLLREVPFGLDGDFSHAALVHRINSDLANDLGNLVSRS 359 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +M+ K + G++P P DE ++ + ++++ M + ++AL + L+ + Sbjct: 360 TAMLNKYFGGILPEPKDRRPEDEPFIAAFADTVRKVDIFMDDLAFNKALQTIWELIGLGN 419 Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL------ 477 +Y D PW L K + DR TVLY ++ +R +A L+ +P ++KI +L Sbjct: 420 KYIDDTAPWALAKDPSQQDRLGTVLYNLLDSLRLVAQLIAPVMPDTSDKILALLNSKPDS 479 Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 A + C+ L+ PG + K P+FPR Sbjct: 480 LTAMGDDCWGGLE----PGSEIAKA-KPLFPR 506 >gi|261208239|ref|ZP_05922912.1| methionyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289565960|ref|ZP_06446399.1| methionyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|293573149|ref|ZP_06684086.1| methionyl-tRNA synthetase [Enterococcus faecium E980] gi|294615978|ref|ZP_06695805.1| methionyl-tRNA synthetase [Enterococcus faecium E1636] gi|294617639|ref|ZP_06697267.1| methionyl-tRNA synthetase [Enterococcus faecium E1679] gi|260077496|gb|EEW65214.1| methionyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289162244|gb|EFD10105.1| methionyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|291591164|gb|EFF22846.1| methionyl-tRNA synthetase [Enterococcus faecium E1636] gi|291596103|gb|EFF27368.1| methionyl-tRNA synthetase [Enterococcus faecium E1679] gi|291606787|gb|EFF36172.1| methionyl-tRNA synthetase [Enterococcus faecium E980] Length = 669 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 217/521 (41%), Positives = 324/521 (62%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+E YI+T I YP+ + HIG++Y I D +AR+ RL G DV + TG DEHGQKI Sbjct: 1 MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIET 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GV + +VD+ + + + + LDISYD FIRTT+ H + ++ ++ ++GDIY Sbjct: 61 KAEELGVKPQEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE ++ + EVYK +G + + V+ ++EE YFFR+S Y D Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YYE HPEFI P R+NE+I+ F+K GL+DL++SR TF WG+ + DP++++YVWID Sbjct: 181 RLLEYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPKKVF H Sbjct: 241 ALSNYITALGYGSEDESLFEKYWPADVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + RVN D Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAVPFGSDGVFTPEDFVSRVNYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG++P + T D + + + V+ + M+ + Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASLVTPFDSELSTTAANVVGRYHDAMEKMEFNT 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 ALA++ L+S ++Y D +PW L K +A ++V+ E +R AILLQ + + Sbjct: 421 ALAEIWVLISRANKYIDETEPWVLAKDEEKKAELNSVMIHLAESLRIAAILLQPIMTETP 480 Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 KIF+ L + E + L G + PIFPR Sbjct: 481 EKIFNQLGLDPETMNLEGLHFGEFPSGTKVVAKGTPIFPRL 521 >gi|298693820|gb|ADI97042.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133] Length = 657 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 219/523 (41%), Positives = 327/523 (62%), Gaps = 19/523 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE YY + ++ D QY N + + V+ ++EE YFF +S Y D Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +Y+ +P+FI P R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+H Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N D Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNLV+R++SMI K +DG +P G E DE + ++ ++ E+M++ Sbjct: 360 LANDLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + +S ++Y D PW L K + D V+ VE IR A+LL+ F+ Sbjct: 420 ALSTIWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479 Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510 +IF+ L + + F SL Q L M+ PIFPR Sbjct: 480 KEIFEQLNINNPQFMEFSSLAQYGVLTEPIMVTGQPKPIFPRL 522 >gi|188584685|ref|YP_001916230.1| methionyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349372|gb|ACB83642.1| methionyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 655 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 215/521 (41%), Positives = 328/521 (62%), Gaps = 19/521 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M YI+T I YP+ + HIGH+Y + AD +AR+ +L G DV+F TGTDEHGQKI + Sbjct: 1 MARDNTFYITTPIYYPSDKLHIGHSYTTVAADCMARYKKLTGYDVMFLTGTDEHGQKIER 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G + FVD+ + +++ +LDI YDDFIRTTE+RH + ++++ ++GDIY Sbjct: 61 KAKENGKNPQQFVDEIVASIKELWTLLDIEYDDFIRTTEERHKSVVQKIFERFYEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 K Y GWY E+++ + DE D V+W++EE YFF++S Y D+LL Sbjct: 121 KDQYEGWYCTPCESFWLERQLDEAKTCPDCA------REVEWVKEESYFFKMSKYADRLL 174 Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 + E++PEFI P R+NE+I+ F+ GL+DL +SR TF WGI++P D +++YVW+DALT Sbjct: 175 EHIENNPEFIQPESRKNEMINNFLNPGLEDLCVSRTTFKWGIEVPMDKDHVVYVWLDALT 234 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NYL+ GYL D K+WP D+H++ K+I+RFH+IYWP FL++ +LPLPK+VF HG++ Sbjct: 235 NYLSALGYLSEDDTKFQKYWPCDVHLMAKEIVRFHSIYWPIFLMALDLPLPKQVFGHGWL 294 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L + K+SKS GNV+DP ++ + G DA+RY+L+REI+ G DG + + L +R+N DLAN Sbjct: 295 LLEEGKMSKSKGNVVDPEVLVNKYGSDAIRYYLLREISFGSDGVFTLEALIRRINYDLAN 354 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNL++R+V+MI K +DG IP P + D +++ + E ++M+ AL Sbjct: 355 DLGNLLNRTVAMIDKYFDGQIPEPVVSEQVDNDLINHAQETVTETEKHMEGMDFSEALKA 414 Query: 417 VISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + L+ ++Y D +PW L K DR +TVLY E +R +++LL F+P+ +I Sbjct: 415 LWELIGRTNKYIDETQPWILGKDPNKKDRLATVLYNLSESLRYISVLLSPFMPRTPKQIR 474 Query: 475 DILFVADENRCFQSLDQ-----RLKPGFMLHKTFDPIFPRF 510 L + D N+ Q+ ++ G + K P+FPR Sbjct: 475 SQLGI-DNNKEIQTYKSLYEWGQIPSGVRVSKD-KPLFPRL 513 >gi|229828787|ref|ZP_04454856.1| hypothetical protein GCWU000342_00861 [Shuttleworthia satelles DSM 14600] gi|229793381|gb|EEP29495.1| hypothetical protein GCWU000342_00861 [Shuttleworthia satelles DSM 14600] Length = 657 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 216/487 (44%), Positives = 317/487 (65%), Gaps = 13/487 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + K YI+TAIAY + +PHIG+ YE+I+AD +ARF R +G DV F TG+DEHGQKI Sbjct: 1 MSNKGKYYITTAIAYTSGKPHIGNTYEIILADAIARFRRQEGYDVFFMTGSDEHGQKIQI 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG++ K VD+NS R + D++D SYD F+RTT+ H + ++KK+ D+GDIY Sbjct: 61 KAEEAGISPKELVDRNSGEIRRIWDLMDTSYDKFMRTTDADHEAQVQKIFKKLYDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y GWY DEA++ D ++ DG+ + PV EE YFFR+S Y D+L+ + Sbjct: 121 KGTYEGWYCTSDEAFWTDSQL---VDGRCPDCGR-PVTRASEEAYFFRMSKYADRLIEHI 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 +SHPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+ Sbjct: 177 KSHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVTFDPKHVVYVWLDALTNYI 236 Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 T GY + DG+ + K+WPADLH+IGKDI+RFH IYWP FL++ PLPK+VF H + Sbjct: 237 TGIGY--DCDGNHSDRYKKYWPADLHLIGKDIIRFHTIYWPIFLMALGQPLPKQVFGHPW 294 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L K+SKS GNVI ++++ GVDA+RYF++ E+ DG + + +RVN+DLA Sbjct: 295 LLQADGKMSKSRGNVIYADDLVDIFGVDAVRYFVLHEMPFENDGVISWELMAERVNSDLA 354 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N +GNLV+R++SM K + G++ G D + + + +Q + + M + + A+ Sbjct: 355 NTMGNLVNRTISMANKYFGGLVEDKGLEEPVDRELKAYAAGTVQRVTDKMADLHVADAIT 414 Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +V L ++Y D PW L K DR +TVLY VE I A LL++F+P A++I Sbjct: 415 EVFHLFRRSNKYIDETMPWALAKDADKQDRLATVLYNLVESIAIGASLLKSFMPSTADQI 474 Query: 474 FDILFVA 480 D L + Sbjct: 475 LDQLNIG 481 >gi|83588921|ref|YP_428930.1| methionyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] gi|83571835|gb|ABC18387.1| methionyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] Length = 651 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 210/477 (44%), Positives = 307/477 (64%), Gaps = 6/477 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I YP+ + HIGHA +AD LAR+ RL G DV F TG+DEHGQKI + A+ A Sbjct: 6 FYVTTPIYYPSDKLHIGHALTTTMADTLARYKRLRGYDVYFLTGSDEHGQKIQRKAREAN 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + +VD+ F+++ L+ISY+DFIRTTE RH + L +KI D+GDIYK Y G Sbjct: 66 LEPIQYVDRIVATFQELWRRLNISYNDFIRTTEPRHARVVQALLQKIYDQGDIYKSTYEG 125 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WY E ++ + ++ DG + PV+ ++EE YFFR+S Y D+LL Y + HP+F Sbjct: 126 WYCTPCETFWTERQL---VDGNCPDCGR-PVELVKEESYFFRMSKYADRLLQYIKDHPDF 181 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P+ RRNE+ISF++ GL+DL +SR TFDWGI +P DP++++YVW DALTNY++ GY Sbjct: 182 IQPVTRRNEMISFIEGGLEDLCISRTTFDWGIPVPMDPKHVIYVWFDALTNYISALGYGT 241 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D K+WPA +H++GKDI+RFH I WP L++A + P++VF HG++L G K+SKS Sbjct: 242 ADDHLFRKYWPAAVHLVGKDIVRFHTIIWPIILMAAGIEPPRQVFGHGWLLVDGGKMSKS 301 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNV+DP+ +I+ G DA+RYFL+RE+ G DG+Y ++ L R N DLAN GNL+SR+ Sbjct: 302 RGNVVDPMILIDRYGSDAIRYFLLREMPYGADGYYSEEALINRYNTDLANDFGNLLSRTT 361 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +MI K G+I P A DE + ++ + + E+ + + RALA + LV+ ++ Sbjct: 362 AMIEKFNGGVIDPPSAPEPLDEELKNLAAGIPDEVDNALNHYEFARALAAIWRLVNRANK 421 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 Y + PW L + R TVLY E +RQ I++ F+P + ++++D L + D Sbjct: 422 YIEETAPWALARDPGQKQRLQTVLYNLAEAVRQATIMVGPFMPGVPDRVWDQLGLKD 478 >gi|303241037|ref|ZP_07327547.1| methionyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] gi|302591462|gb|EFL61200.1| methionyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] Length = 643 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 209/508 (41%), Positives = 327/508 (64%), Gaps = 9/508 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I YP+ + HIGH+Y + AD +AR+ RL G DV+F TGTDEHGQKI + A+ GV Sbjct: 7 YITTPIYYPSDKLHIGHSYTTVAADAVARYKRLKGYDVMFLTGTDEHGQKIQRKAEAKGV 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K +VD+ +D+ ++ I+ D FIRTT+K H + + ++KK+ D+GDIYK Y GW Sbjct: 67 TPKQYVDEIVDGIKDLWKLMKITNDRFIRTTDKNHEEAVQKIFKKLYDQGDIYKSEYEGW 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ ++ DG+ + V+ +EE YFFRLS YQD+L+ + E +PEFI Sbjct: 127 YCTPCESFWTKTQL---VDGKCPDCGRE-VELTKEESYFFRLSKYQDRLIKFIEENPEFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P+ R+NE+++ F++ GL+DL +SR TF+WG+ + D ++++YVWIDAL+NY+T G++ Sbjct: 183 QPVSRQNEMLNNFLRPGLEDLCVSRTTFNWGVPVTFDEKHVVYVWIDALSNYITALGFMS 242 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 + + K+WPAD+H++GK+I+RFH I WPA L++ PLPK+++ HG++L +G K+SKS Sbjct: 243 EDEQAYKKYWPADVHLVGKEIVRFHTIIWPAMLMALGEPLPKQIYGHGWLLLEGGKMSKS 302 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNV+DP+ ++E+ G+DA+RYFL+RE+ G DG + + L R+N+DLAN +GNLVSR+V Sbjct: 303 KGNVVDPVVLVEKYGLDAIRYFLLREVPFGSDGVFSNEALINRINSDLANDLGNLVSRTV 362 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +MI K +DG++P + D+ + V ++ + + AL ++ ++S ++ Sbjct: 363 AMIDKYFDGVMPDERLEGDFDQDLKKVVMETPPKVEQLLDKLQFSSALTEIWKVISRTNK 422 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 Y D PW L K N R + V+Y E +R ++ILLQ F+P+ KI++ L + D+ Sbjct: 423 YIDETMPWALAKDEANKPRLAGVMYNLAESLRIVSILLQPFMPETPEKIWNQLGLTDKKT 482 Query: 485 CFQSLDQR--LKPGFMLHKTFDPIFPRF 510 Q + P D IFPR Sbjct: 483 IDWDSTQNWGVYPAGTKVNKGDVIFPRI 510 >gi|328956554|ref|YP_004373940.1| methionine--tRNA ligase [Carnobacterium sp. 17-4] gi|328672878|gb|AEB28924.1| methionine--tRNA ligase [Carnobacterium sp. 17-4] Length = 674 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 219/524 (41%), Positives = 323/524 (61%), Gaps = 15/524 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG+AY I DV+AR+ R+ DV + TG+DEHGQKI Sbjct: 1 MTEKKTFYITTPIYYPSGKLHIGNAYSTIACDVMARYKRMQDFDVFYLTGSDEHGQKIEN 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ +T + +VDQ + + + ++L+IS D FIRTT+ H ++++ +GDIY Sbjct: 61 KAQELNITPQKYVDQMAEGMQKLWELLEISNDKFIRTTDPAHEKVVADIFERFLAQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYND--------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y GWYS+ DE +Y + D+ G+ ++ H PV+ ++EE YFFR+S Y Sbjct: 121 LDEYEGWYSVPDETFYTETQLVDIERDDQGNIVGGKSPDSGH-PVELIKEESYFFRMSKY 179 Query: 173 QDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231 D+LL+YY HP+FI P R+NE+I+ F+K GL+DL++SR TF WG+K+P +P++++YVW Sbjct: 180 SDRLLAYYNEHPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVKVPSNPKHVIYVW 239 Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291 IDAL NY+T GY + KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKK+F Sbjct: 240 IDALANYITALGYGTDDTSLFDKFWPADVHMVGKEIVRFHTIYWPIMLMALDLPLPKKIF 299 Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 HG++L K K+SKS GNV+ P ++E+ G+DALRY+L+RE+ G DG + + RVN Sbjct: 300 GHGWLLMKDGKMSKSKGNVVYPEMLVEQYGLDALRYYLMREVTFGSDGVFTPEDFVSRVN 359 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLI 410 DLAN +GNL++R+++MI K +DG +P G TE D + +V + + M+N Sbjct: 360 YDLANDLGNLLNRTIAMINKYFDGKVPEYSGNVTEFDTILKETAEKVCVDYQNEMENMQF 419 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPK 468 AL+ V L+S ++Y D PW+L K + ++V+ E +R AILLQ F+ Sbjct: 420 SSALSHVWVLISRANKYIDETAPWKLAKEEEKTSELASVMVHLAETLRISAILLQPFLTH 479 Query: 469 LANKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 +IF L V E S Q + K PIFPR Sbjct: 480 APKEIFAQLGVEGEFAGNWSTVQFGSFPENTTVIKKGTPIFPRL 523 >gi|251809798|ref|ZP_04824271.1| methionyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|282875420|ref|ZP_06284292.1| methionine--tRNA ligase [Staphylococcus epidermidis SK135] gi|251806666|gb|EES59323.1| methionyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|281295777|gb|EFA88299.1| methionine--tRNA ligase [Staphylococcus epidermidis SK135] gi|329733027|gb|EGG69366.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU028] Length = 656 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 219/521 (42%), Positives = 329/521 (63%), Gaps = 15/521 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ +++ L+IS DDFIRTTEKRH +++++ +GDIY G Sbjct: 63 KAGKTELEYLDEMISGIKNLWSKLEISNDDFIRTTEKRHKQVVEKVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y GWYS+ DE YY + D VY+ G+ ++ H V+ ++EE YFF ++ Y D+L Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGKIVGGKSPDSGHE-VELVKEESYFFNINKYTDRL 181 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 L +Y+ +P+FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL Sbjct: 182 LEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+HG+ Sbjct: 242 VNYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N DLA Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNLV+R++SMI K + G +P G E DE + ++ ++ +NM++ AL Sbjct: 362 NDLGNLVNRTISMINKYFHGELPAYQGPKHELDEKMEAMALETVKSFNDNMESLQFSVAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 + V +S ++Y D +PW L K R V+ VE IR ILLQ F+ + Sbjct: 422 STVWKFISRTNKYIDETQPWVLAKDENQREMLGNVMAHLVENIRFATILLQPFLTHAPRE 481 Query: 473 IFDILFVADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 IF L + + + SL Q L + + PIFPR Sbjct: 482 IFKQLNINNPDLHQLDSLQQYGMLSEAITVTEKPTPIFPRL 522 >gi|257899755|ref|ZP_05679408.1| methionyl-tRNA synthetase [Enterococcus faecium Com15] gi|257837667|gb|EEV62741.1| methionyl-tRNA synthetase [Enterococcus faecium Com15] Length = 669 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 217/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+E YI+T I YP+ + HIG++Y I D +AR+ RL G DV + TG DEHGQKI Sbjct: 1 MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIET 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GV + +VD+ + + + + LDISYD FIRTT+ H + ++ ++ ++GDIY Sbjct: 61 KAEELGVKPQEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE ++ + EVYK +G + + V+ ++EE YFFR+S Y D Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YYE HPEFI P R+NE+I+ F+K GL+DL++SR TF WG+ + DP++++YVWID Sbjct: 181 RLLEYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPKKVF H Sbjct: 241 ALSNYITALGYGSEDESLFEKYWPADVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + RVN D Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAVPFGSDGVFTPEDFVSRVNYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG++P + T D + + + V+ + M+ + Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASLVTPFDSELSTTAANVVGRYHDAMEKMEFNT 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 ALA++ L+S ++Y D +PW L K A ++V+ E +R AILLQ + + Sbjct: 421 ALAEIWVLISRANKYIDETEPWVLAKDEEKNAELNSVMIHLAESLRIAAILLQPIMTETP 480 Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 KIF+ L + E + L G + PIFPR Sbjct: 481 EKIFNQLGLDPETMNLEGLHFGEFPSGTKVVAKGTPIFPRL 521 >gi|258448031|ref|ZP_05696161.1| methionyl-tRNA synthetase [Staphylococcus aureus A6224] gi|257858721|gb|EEV81594.1| methionyl-tRNA synthetase [Staphylococcus aureus A6224] Length = 657 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 217/521 (41%), Positives = 328/521 (62%), Gaps = 15/521 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVY-------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y GWYS+ DE YY + ++ K G+ ++ H V+ ++EE YFF +S Y D+L Sbjct: 123 YEGWYSVPDETYYTESQLVYPQYENGKIIGGKSPDSGHE-VELVKEESYFFNISKYTDRL 181 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 L +Y+ +P+FI P R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWIDAL Sbjct: 182 LEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDAL 241 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY++ GYL + + ++WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+HG+ Sbjct: 242 VNYISALGYLSDDESLFNRYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N DLA Sbjct: 302 ILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNLV+R++SM+ K +DG +P G E DE + ++ ++ E+M++ AL Sbjct: 362 NDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + V +S ++Y D PW L K + D V+ VE IR A+LL+ F+ + Sbjct: 422 STVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKE 481 Query: 473 IFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510 IF+ L + + F SL+Q L M+ PIFPR Sbjct: 482 IFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522 >gi|253730957|ref|ZP_04865122.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253725307|gb|EES94036.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 657 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 218/523 (41%), Positives = 327/523 (62%), Gaps = 19/523 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE YY + ++ D QY N + + V+ ++EE YFF +S Y D Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +Y+ +P+FI P R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+H Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N D Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNLV+R++SM+ K ++G +P G E DE + ++ ++ E+M++ Sbjct: 360 LANDLGNLVNRTISMVNKYFNGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ V +S ++Y D PW L K + D V+ VE IR A+LL+ F+ Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLDNVMAHLVENIRYAAVLLRPFLTHAP 479 Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510 +IF+ L + + F SL Q L M+ PIFPR Sbjct: 480 KEIFEQLNINNPQFMEFSSLAQYGVLTESIMVTGQPKPIFPRL 522 >gi|163784145|ref|ZP_02179086.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp. 128-5-R1-1] gi|159880589|gb|EDP74152.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp. 128-5-R1-1] Length = 633 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 220/508 (43%), Positives = 315/508 (62%), Gaps = 8/508 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I Y N PHIGHAY + ADVLAR++R G+ F TGTDEHG KI K+A+ Sbjct: 3 DKFYITTPIYYVNDVPHIGHAYTTVAADVLARYNRQKGIKTFFLTGTDEHGLKIQKSAEE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T K DQ + F+++ VL+ISYD FIRTT++ H + +++K + GDIY G Y Sbjct: 63 KGITPKELADQTHQKFKELWQVLNISYDRFIRTTDEDHIKAVQYIFQKCYENGDIYLGKY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY + E + + E+ D Y H + + EE YFFRLS Y DKLL YE + Sbjct: 123 EGWYCVGCEEFKTETEI---KDLDYKCPIHQKKCEKIVEESYFFRLSKYTDKLLKLYEKN 179 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241 PEFI P RRNEV+SFVK GLKDLS+SRK WGI +P D + +YVW DALTNYLT Sbjct: 180 PEFIQPDYRRNEVVSFVKQGLKDLSVSRKRDRVKWGIPVPFDENHTIYVWFDALTNYLTA 239 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY D FWPAD+H++GKDILRFHA+YWPAFL+SA L +P+KVF+HG+ +G+ Sbjct: 240 VGYPDTESELFKTFWPADVHIVGKDILRFHAVYWPAFLMSAGLEIPEKVFAHGWWTVEGK 299 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+DP + ++ GVD LRYFL+RE+ G DG + K + R+N+DLAN +GNL Sbjct: 300 KMSKSLGNVVDPFKAVKSYGVDELRYFLMREVPFGLDGDFSKSAVIGRINSDLANDLGNL 359 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 +SRS++MI K G++ +T+ ++ + ++ + ++++N +++L + + Sbjct: 360 ISRSLTMINKFKKGIVECGEKYTDLEKEYKEIYLYTVENVDKHLKNLEYNKSLELIWEFI 419 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 +++Y +PW LKK+ T LYV + I + LL F+P + ++L + + Sbjct: 420 DFLNKYIVKTEPWALKKSQDPYLDTTLYVLADGIYAIIWLLSPFMPDKMKEALNMLGLEE 479 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 + + G + K P+FPR Sbjct: 480 FTYIPEPFN--FPSGTKIAKKIKPLFPR 505 >gi|73663575|ref|YP_302356.1| methionyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82582280|sp|Q49UZ9|SYM_STAS1 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|72496090|dbj|BAE19411.1| methionyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 658 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 219/521 (42%), Positives = 329/521 (63%), Gaps = 15/521 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYTTTAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG + ++D+ +D+ L+IS DDFIRTTE RH + + +++++ +GDIY G Sbjct: 63 KAGKSEIEYLDEMIAGIKDLWGKLEISNDDFIRTTEIRHKEVVQQIFERLLAQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKG-------ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y GWYS+ DE YY + ++ G+ ++ H V+ ++EE YFF LS Y D+L Sbjct: 123 YEGWYSVPDETYYTETQLVDPIMENGVIVGGKSPDSGHE-VELVKEESYFFNLSKYTDRL 181 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 L +Y+ +PEFI P R+NE+I+ F+K GL+DL++SR +FDWGI++ +P++++YVWIDAL Sbjct: 182 LEFYDENPEFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGIRVQSNPKHVVYVWIDAL 241 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+++ GYL + D K+WPAD+H++ K+I+RFH+I WP L++ ++PLPKKVF+HG+ Sbjct: 242 VNYISSLGYLSDDDSLFKKYWPADIHIMAKEIVRFHSIIWPILLMALDIPLPKKVFAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 IL K K+SKS GNV+DP +I G+DA RY+L+RE+ G DG + +G +R N DLA Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLINRYGLDATRYYLMRELPFGSDGVFTPEGFVERTNYDLA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNLV+R++SM+ K +DG +P G E D+ + + ++ ENM + AL Sbjct: 362 NDLGNLVNRTISMVNKYFDGELPAYQGPKHELDKDMEQMALDTVKTFHENMDDLQFSVAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 + + +S ++Y D PW L K + V+ VE IR +A+LL+ F+ + Sbjct: 422 STIWKFISRTNKYIDETSPWVLAKDEDQKEMLGNVMAHLVENIRIIAVLLRPFLTHAPKQ 481 Query: 473 IFDILFV-ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 IF L + A E +S++Q L M+ +PIFPR Sbjct: 482 IFSQLNINAPELFELESIEQYGALTEPIMVSGKPEPIFPRL 522 >gi|312828985|emb|CBX33827.1| methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS) [Staphylococcus aureus subsp. aureus ECT-R 2] Length = 657 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 217/523 (41%), Positives = 327/523 (62%), Gaps = 19/523 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174 Y GWYS+ DE YY + ++ D QY N + + V+ ++EE YFF +S Y D Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL +Y+ +P+FI P R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY++ GYL + + ++WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+H Sbjct: 240 ALVNYISALGYLSDDESLFNRYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K K+SKS NV+DP +I+ G+DA RY+L+RE+ G DG + + +R N D Sbjct: 300 GWILMKDGKMSKSKSNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNLV+R++SM+ K +DG +P G E DE + ++ ++ E+M++ Sbjct: 360 LANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ V +S ++Y D PW L K + D V+ VE IR A+LL+ F+ Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479 Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510 +IF+ L + + F SL+Q L M+ PIFPR Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522 >gi|47569887|ref|ZP_00240554.1| methionyl-tRNA synthetase [Bacillus cereus G9241] gi|47553421|gb|EAL11805.1| methionyl-tRNA synthetase [Bacillus cereus G9241] Length = 626 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 214/491 (43%), Positives = 327/491 (66%), Gaps = 16/491 (3%) Query: 34 LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93 +AR+ R+ G +V + TGTDEHGQKI K A+ VT + +VD +++ + +DISYDD Sbjct: 1 MARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNVTPQAYVDNIVAGIKELWEKMDISYDD 60 Query: 94 FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND----DEVYKG---AD 146 FIRTTE RH D ++K++ D+GDIY Y GWYS++DE +Y + D + +G Sbjct: 61 FIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKVVG 120 Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLK 205 G+ ++ H+ V+ + EE YFFR+ Y D+LL +YE +P FI P R+NE+I+ F+K GL+ Sbjct: 121 GKSPDSGHD-VELVREESYFFRMGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLE 179 Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265 DL++SR +FDWG+++P +P++++YVW+DAL+NY+T GY + KFWPAD+H++GK Sbjct: 180 DLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGK 239 Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 +I+RFH IYWP L++ +LPLPKKVF+HG+IL K K+SKS GNV+DP+ +I+ G+DAL Sbjct: 240 EIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDAL 299 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FT 384 RY+L+RE+ G DG + +G +R+N DLAN +GNL++R+V+MI K ++G IP A T Sbjct: 300 RYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYFNGEIPAFKANVT 359 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 E DE++++ L+++ E M+N AL+ + LVS ++Y D +PW L K DR Sbjct: 360 EFDETLVAFAKDTLKKVEEAMENMEFSVALSSIWQLVSRTNKYIDETQPWVLAKDENDRE 419 Query: 445 --STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-NRCFQSLDQ--RLKPGFML 499 ++V+ EV+RQ I+L F+ +K+F L + +E + ++SL + G + Sbjct: 420 KLASVMAHLAEVLRQTGIMLMPFLTVAPSKMFAQLGLTEEAHTSWESLSTIGCIPAGTKV 479 Query: 500 HKTFDPIFPRF 510 K +PIFPR Sbjct: 480 EKG-NPIFPRL 489 >gi|114565624|ref|YP_752778.1| methionyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336559|gb|ABI67407.1| methionyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 645 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 213/519 (41%), Positives = 329/519 (63%), Gaps = 18/519 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M+ ++ YI+T I YP+ HIGHAY + AD +ARF R+ G DV + TGTDEHGQKI K Sbjct: 1 MQRKKSYYITTPIYYPSDNLHIGHAYTTVAADCMARFKRMQGYDVFYLTGTDEHGQKIEK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ G+ +VD + R + + + I++ DFIRTTE RH + ++ K+ ++GDI+ Sbjct: 61 AAREKGMEPIKYVDGIVESIRQLWETMLITHTDFIRTTEARHEQLVQKIFNKVYEQGDIF 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 Y GWY E ++ + ++ A+G + V+ ++EE YFF +S Y D+LL + Sbjct: 121 ISQYEGWYCTPCETFFTERQL---AEGNCPDCGRE-VELLKEESYFFNMSKYADRLLEHI 176 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E+HP+FI P RRNEV++F+K GL+DL +SR TF WG+ +P + ++++YVW DAL NYLT Sbjct: 177 ETHPDFIQPESRRNEVVNFIKMGLEDLCVSRTTFQWGVPVPFNQKHVVYVWFDALINYLT 236 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY+D+ + K ++WPAD+H++ KDI+RFHAI WP L++ +LPLPKKV +HG+I+ +G Sbjct: 237 AIGYMDDEEKFK-QYWPADVHLMAKDIIRFHAIIWPIMLMALDLPLPKKVCAHGWIMLEG 295 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKS GNV+DP+ ++++ GVDA+RY+LVRE++ G+DG+Y ++ L R+N+DLAN +GN Sbjct: 296 GKMSKSKGNVVDPVVLVKKYGVDAVRYYLVRELSFGQDGYYSEEMLVNRINSDLANDLGN 355 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+SR+++MI + +DG+IP G DE +++ +E E + + L Sbjct: 356 LISRTIAMIERYFDGVIPVSGIAEALDEDLINTAREAYREATEKLDKLDFASYIMATRKL 415 Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 VS ++Y D PW L K +R ++V+Y E IR I+L +P L ++ + Sbjct: 416 VSRANKYIDETAPWLLAKEVAKKERLASVMYNLAESIRIALIMLAPCMPTLLSRANRQIE 475 Query: 479 VADENRCFQSLD-------QRLKPGFMLHKTFDPIFPRF 510 + D N Q+LD R K G + + +P+FPR Sbjct: 476 IFDLN---QNLDWDEAAEWGRCKAGSKVRRG-EPLFPRI 510 >gi|222475434|ref|YP_002563851.1| methionyl-tRNA synthetase (metS) [Anaplasma marginale str. Florida] gi|222419572|gb|ACM49595.1| methionyl-tRNA synthetase (metS) [Anaplasma marginale str. Florida] Length = 524 Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust. Identities = 216/516 (41%), Positives = 326/516 (63%), Gaps = 14/516 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +++ E Y++T I Y N PHIGH Y +I+DV ARF L G V FTTGTDEHGQK+ Sbjct: 10 VRQGECFYVTTPIYYVNDTPHIGHFYTTLISDVAARFRSLSGKQVKFTTGTDEHGQKVEN 69 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GV + FVD+ S +FR++ V S +DFIRTTE+RH LW+++ IY Sbjct: 70 MARARGVPVRQFVDEISGSFRNLVGVSGFSCNDFIRTTEERHKRAVLALWERLRGNNQIY 129 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 G Y+G+YS+RDE +Y + ++ DG+ V+W+EE GYFF+LS +Q+ LL +Y Sbjct: 130 LGHYAGFYSVRDETFYQERDL---VDGKAPTGAE--VEWLEEPGYFFKLSEWQESLLKFY 184 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238 +P+F++P + NEVISFV+SGL+DLS+SR K+ WGI++P D +I+Y+W+DAL Y Sbjct: 185 ADNPKFVIPEGKFNEVISFVESGLRDLSVSRSKKSLSWGIEVPHDSDHIIYIWVDALCCY 244 Query: 239 LTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L G+ + +G ++W +D HV+GKDILRFHA+YWPA L++A+LPLPK++ +HG Sbjct: 245 LALLGFPET-EGEYKRYWGSDGAVSTHVVGKDILRFHAVYWPALLMAADLPLPKQIVAHG 303 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + L++G+KISKS+GNVIDP +IE+ G+D RYFL+ E G D + L +R+N DL Sbjct: 304 WWLNEGQKISKSIGNVIDPFALIEQYGLDNCRYFLLSETPVGNDASFSGASLVERINCDL 363 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 AN GNLV R+++++ ++ G IP + +E+ ++ + ++Q + E M AL Sbjct: 364 ANNFGNLVQRTITLVHRECGGKIPEVEGMMQGEEAPINYKAVLVQYV-EYMAEYRFFEAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 V++L S + Y + PW+L K + A V++ +E IR + I+LQ FVP A+KI Sbjct: 423 KFVMNLSSVANEYIARRAPWKLFKEDRKSAQAVVFKLLEYIRCIGIMLQPFVPDSASKIL 482 Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 D + + + R F+ + + G L T P+F + Sbjct: 483 DQISLPADRRSFEHFSEFCRGGVSL-GTPTPVFGKL 517 >gi|313902248|ref|ZP_07835654.1| methionyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] gi|313467478|gb|EFR62986.1| methionyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] Length = 689 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 226/516 (43%), Positives = 309/516 (59%), Gaps = 14/516 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + R + YI+T I YPN + HIGH Y + AD LAR+HRL G + TGTDEHGQKI +A Sbjct: 21 RGRGRFYITTPIYYPNDRLHIGHTYTTVAADALARYHRLRGDETWLLTGTDEHGQKIERA 80 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ AG ++D R + L ISYDDFIRTTE RH + +++++ DKGDIYK Sbjct: 81 ARQAGKEPLEYIDPIVEATRQLWQRLHISYDDFIRTTEPRHKARVQQIFQRLYDKGDIYK 140 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 G Y G Y EAYY + E+ DG PV+ ++EE YFFRLS Y + LL + E Sbjct: 141 GVYEGLYCTACEAYYTEAELL---DGGRCPVHETPVERLQEESYFFRLSRYAEPLLEHIE 197 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HP FI P RRNEVI+F++ GL+DLS+SR +F WGI +P DP +++YVWIDAL NY+T Sbjct: 198 RHPGFIQPPSRRNEVIAFIRQGLQDLSVSRTSFRWGIPVPFDPDHVIYVWIDALANYITA 257 Query: 242 TGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 G+ PDG +FWPAD+H+IGKDILRFHAI WPA L++ PLP+ V+ HG++L G Sbjct: 258 LGW---PDGELYRRFWPADVHLIGKDILRFHAIIWPALLMALGEPLPRCVYGHGWLLIDG 314 Query: 301 EKISKSL--GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 KI KS G VIDP+++IE+ GVD +RYFL+RE+ G DG Y ++ L +R+N DLAN + Sbjct: 315 GKIGKSRAGGQVIDPVQLIEKYGVDPVRYFLLREVPFGDDGSYSEEALVRRLNTDLANDL 374 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNL R+ MI + DG IP P A SD + + + + + + AL + Sbjct: 375 GNLAWRTTGMIQRFLDGRIPRPPAGA-SDGVLAAAARETAARVEQALDRFDLPAALQAIW 433 Query: 419 SLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L+ ++Y D Q PW L++ DR VLY E R + +LL F+ + +++ L Sbjct: 434 DLIGRANKYIDEQAPWALRREGRQDRLEAVLYDVAETARVVGVLLSPFLVETPARLWTQL 493 Query: 478 FVADENRCF---QSLDQRLKPGFMLHKTFDPIFPRF 510 + + R Q L+ P P+FPR Sbjct: 494 GLGPDYRPAGWQQGLEWGQLPAGARVVRDQPLFPRI 529 >gi|269958523|ref|YP_003328310.1| methionyl-tRNA synthetase [Anaplasma centrale str. Israel] gi|269848352|gb|ACZ48996.1| methionyl-tRNA synthetase [Anaplasma centrale str. Israel] Length = 515 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 217/516 (42%), Positives = 324/516 (62%), Gaps = 14/516 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M+ E Y++T I Y N PHIGH Y +I+DV ARF L G V FTTGTDEHGQK+ Sbjct: 1 MRRGECFYVTTPIYYVNDTPHIGHFYTTLISDVAARFRSLSGKQVKFTTGTDEHGQKVEN 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GV + FVD+ S +FR++ V S +DFIRTTE+RH LW+++ IY Sbjct: 61 MARARGVPVRQFVDKISGSFRNLVGVSGFSCNDFIRTTEERHKRAVLALWERLRGNNQIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 G Y+G+YS+RDE +Y + ++ DG+ V+W+EE GYFF+LS +Q+ LL +Y Sbjct: 121 LGHYAGFYSVRDETFYQERDL---VDGKAPTGAE--VEWLEEPGYFFKLSEWQESLLKFY 175 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238 +P+F++P + NEVISFV+SGL+DLS+SR K+ WGI++P D +I+Y+W+DAL Y Sbjct: 176 ADNPKFVIPEGKFNEVISFVESGLRDLSVSRSKKSLSWGIEVPHDSDHIIYIWVDALCCY 235 Query: 239 LTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L G+ + +G ++W +D HV+GKDILRFHA+YWPA L++A LPLPK++ +HG Sbjct: 236 LALLGFPET-EGEYKRYWGSDDAVSTHVVGKDILRFHAVYWPALLMAAGLPLPKQIVAHG 294 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + L++G+KISKS+GNVIDP +IE+ G+D RYFL+ E G D + L +R+N DL Sbjct: 295 WWLNEGQKISKSIGNVIDPFALIEQYGLDNCRYFLLSETPVGNDASFSGASLVERINCDL 354 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 AN GNLV R+++++ ++ G IP + +E+ ++ + ++Q + E M AL Sbjct: 355 ANNFGNLVQRTITLVHRECGGKIPGVEGMMKGEEAPINYEAVLVQYV-EYMAEYRFFEAL 413 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 V++L S + Y + PW+L K + A V++ +E IR + I+LQ FVP A+KI Sbjct: 414 KFVMNLSSVANEYIARRAPWKLFKEDRKSAQAVVFKLLEYIRCIGIMLQPFVPDSASKIL 473 Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 D + + + R F+ + + G L T P+F + Sbjct: 474 DQISLPADRRTFEHFSEFCRGGVSL-GTPTPVFGKL 508 >gi|289523381|ref|ZP_06440235.1| methionine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503073|gb|EFD24237.1| methionine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 646 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 209/480 (43%), Positives = 310/480 (64%), Gaps = 7/480 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M YI+T I Y N PHIGHAY + ADV+AR+ R+ G+D LF TGTDEHGQK+ + Sbjct: 1 MNRESSFYITTPIYYVNDVPHIGHAYTTVAADVMARYKRMCGIDTLFATGTDEHGQKVQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ G+T + D+ NF+ + + L+IS DDF+RTTE+RH + + ++KK+ D+GDIY Sbjct: 61 VAQREGITPQELADRTVLNFKKLWEALNISCDDFVRTTEQRHIEVVQYIFKKLMDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y GWY + E Y + ++ +G+ P++ M EE YFFR+S Y LL YY Sbjct: 121 KGTYEGWYCVPCETYVPESQM---GEGKTCPDCRRPLERMTEESYFFRMSKYAQPLLEYY 177 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E +P ++P R NE++SF+K GLKD S+SR T WGI +P D +++YVW DAL NYLT Sbjct: 178 EKNPTAVMPESRYNEIVSFIKMGLKDQSVSRTTLKWGIPVPGDDAHVIYVWFDALINYLT 237 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY + + K K+WP H++GKDILRFH+I WP+ LL+ + PK+VF+HG+ +G Sbjct: 238 VCGYPQDEERWK-KYWPVVRHLVGKDILRFHSIVWPSMLLALGVNPPKQVFAHGWWTVEG 296 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKS GNV+DP EV++ G D RYF++RE+ G DG + + L +R+N+DLAN +GN Sbjct: 297 EKMSKSRGNVVDPFEVVDLYGADPFRYFMLREVPFGLDGDFSEKALVQRINSDLANDLGN 356 Query: 361 LVSRSVSMILKDYDGMIPTP-GAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVI 418 L+SR++ M++K +DG++P P T+ D+ I V +LQ + +M AL ++ Sbjct: 357 LLSRTLQMVVKYFDGIVPEPLSKSTKEDQEIGGDVVEALLQRVDRSMSRFAYDDALKEIW 416 Query: 419 SLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V ++Y D PW+L ++ + +R S+VLY E ++ +A+ L+ F+P A +I++ L Sbjct: 417 GYVGLANKYIDLTMPWKLGEEGDRERLSSVLYNLCESLKCIALFLRPFMPAKALEIWEQL 476 >gi|254520460|ref|ZP_05132516.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] gi|226914209|gb|EEH99410.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] Length = 647 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 210/490 (42%), Positives = 318/490 (64%), Gaps = 9/490 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG+ Y + AD LAR+ RL G DV+F TGTDEHGQKI + A+ Sbjct: 3 KKTYYITTPIYYPSTKLHIGNTYTTVAADALARYKRLTGYDVMFLTGTDEHGQKIQRIAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K VD+ +D+ +++ISYD FIRTT+ H + ++KK+ DKGDIYK Sbjct: 63 EKGITPKEHVDEIVSGIKDLWKMMNISYDKFIRTTDDYHIKAVQDIFKKLYDKGDIYKSS 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ G PV+ +EE YFF++S Y DKL+ Y E+H Sbjct: 123 YEGLYCTPCESFWTETQLVNGNCPDC----GRPVEKSKEEAYFFKMSNYADKLMEYIETH 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI P R+NE+++ F+K GL+DL +SR +F+WG+ + D +++YVWIDAL+NY+T Sbjct: 179 PDFIQPESRKNEMVNNFLKPGLQDLCVSRTSFNWGVPVTFDENHVVYVWIDALSNYITAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY + K+WPAD+H+IGKDILRFH IYWP L++ +LPLPK+VF HG++L G K Sbjct: 239 GYGSDNKDLYDKYWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ ++E GVDA+RY+L+REI G DG ++ + K++N+DL N +GNL+ Sbjct: 299 MSKSKGNVVDPVTLVENFGVDAVRYYLLREIPFGSDGLFNNEIFIKKINSDLCNDLGNLL 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+V+MI K +DG+IP D+ ++S+ +++ + + + I AL + L+ Sbjct: 359 SRTVAMIEKYFDGVIPNNNIKEAIDDELISLALETPKKVNKAIDDLRIPEALENIFELIG 418 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++Y D PW L K +R TVLY +E +R ++LL AF+P + KI + + + Sbjct: 419 RANKYIDETTPWILAKDEDKKERLGTVLYNLIESLRFSSVLLSAFLPDTSKKINEQINAS 478 Query: 481 DENRCFQSLD 490 N F+SL+ Sbjct: 479 --NITFESLN 486 >gi|319399647|gb|EFV87901.1| methionyl-tRNA synthetase [Staphylococcus epidermidis FRI909] Length = 656 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 218/521 (41%), Positives = 329/521 (63%), Gaps = 15/521 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ +++ L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTELEYLDEMISGIKNLWSKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y GWYS+ DE YY + D VY+ G+ ++ H V+ ++EE YFF ++ Y D+L Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGKIIGGKSPDSGHE-VELVKEESYFFNINKYTDRL 181 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 L +Y+ +P+FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL Sbjct: 182 LEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+HG+ Sbjct: 242 VNYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N DLA Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNLV+R++SMI K + G +P G E DE + ++ ++ +NM++ AL Sbjct: 362 NDLGNLVNRTISMINKYFHGELPAYQGPKHELDEKMEAMALETVKSFNDNMESLQFSVAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 + V +S ++Y D +PW L K R V+ VE IR ILLQ F+ + Sbjct: 422 STVWKFISRTNKYIDETQPWVLAKDENQREMLGNVMAHLVENIRFATILLQPFLTHAPRE 481 Query: 473 IFDILFVADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 IF L + + + SL Q L + + PIFPR Sbjct: 482 IFKQLNINNPDLHQLDSLQQYGMLSEAITVTEKPTPIFPRL 522 >gi|27469211|ref|NP_765848.1| methionyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228] gi|57866027|ref|YP_187724.1| methionyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|293366132|ref|ZP_06612819.1| methionine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|38258352|sp|Q8CQU3|SYM_STAES RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|81675420|sp|Q5HRR5|SYM_STAEQ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|27316760|gb|AAO05935.1|AE016751_230 methionyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228] gi|57636685|gb|AAW53473.1| methionyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|291319726|gb|EFE60085.1| methionine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|329723953|gb|EGG60478.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU144] gi|329737889|gb|EGG74117.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU045] Length = 656 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 218/521 (41%), Positives = 329/521 (63%), Gaps = 15/521 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ +++ L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTELEYLDEMISGIKNLWSKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y GWYS+ DE YY + D VY+ G+ ++ H V+ ++EE YFF ++ Y D+L Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGKIVGGKSPDSGHE-VELVKEESYFFNINKYTDRL 181 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 L +Y+ +P+FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL Sbjct: 182 LEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+HG+ Sbjct: 242 VNYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N DLA Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNLV+R++SMI K + G +P G E DE + ++ ++ +NM++ AL Sbjct: 362 NDLGNLVNRTISMINKYFHGELPAYQGPKHELDEKMEAMALETVKSFNDNMESLQFSVAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 + V +S ++Y D +PW L K R V+ VE IR ILLQ F+ + Sbjct: 422 STVWKFISRTNKYIDETQPWVLAKDENQREMLGNVMAHLVENIRFATILLQPFLTHAPRE 481 Query: 473 IFDILFVADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 IF L + + + SL Q L + + PIFPR Sbjct: 482 IFKQLNINNPDLHQLDSLQQYGMLSEAITVTEKPTPIFPRL 522 >gi|154249481|ref|YP_001410306.1| methionyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] gi|154153417|gb|ABS60649.1| methionyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] Length = 650 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 213/480 (44%), Positives = 315/480 (65%), Gaps = 3/480 (0%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I Y NA+PHIG +Y II D+LAR+ RL G +V + TGTDEHGQKIA+AA+ Sbjct: 2 KKFYITTPIYYVNAEPHIGSSYTTIIGDILARYKRLMGYEVFYLTGTDEHGQKIAQAARE 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ K D + F+++ L I+ D FIRTT++ H T + K+ + GDIYKG Y Sbjct: 62 KGLEPKELCDTLAEKFKELWKDLGITNDYFIRTTDENHEKTVQYFVSKMMENGDIYKGIY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY + E Y+N++E+ G + V + EE YFFRLS Y D LL +++ + Sbjct: 122 EGWYCVPCETYWNEEELEHDEHGHNICPSCKREVNLIREENYFFRLSKYNDALLKHFQEN 181 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+F+ P RRNE++ ++SGLKDLS++R T WGI +P+DP++++YVW+DAL NY++ G Sbjct: 182 PDFVEPDFRRNEMLKILESGLKDLSITRTTLKWGIPMPNDPEHVIYVWVDALINYVSAIG 241 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y ++ D K+WPAD+H+IGK+I RFH++ WPA L+S LPLPKKVF+HG++ G+KI Sbjct: 242 YPNDMDKFN-KWWPADVHLIGKEINRFHSLIWPAMLMSVGLPLPKKVFAHGWLTVNGQKI 300 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGN IDP E + + G D +RY+LVR+I GKDG + ++ L KR+N+DLAN GNL+ Sbjct: 301 SKSLGNAIDPREYVRKYGNDVVRYYLVRDIVFGKDGDFSEENLIKRLNSDLANDYGNLLH 360 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+++MI K +D +IP G E D+ ++ V + E M + I AL + +S+ Sbjct: 361 RTLAMIQKHFDSVIPGVGNLEEIDKKLIEDYDLVKNKFIELMDSYKITDALEVLWQFISQ 420 Query: 424 VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 +++YFD KPW L K+ N +R TVL + E I ++A L+ +P + +++ L V ++ Sbjct: 421 LNKYFDETKPWVLAKEGNKERLGTVLSLVTESIFKVATLVSPVMPDSSLEVYKRLSVNEK 480 >gi|222100458|ref|YP_002535026.1| Methionyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] gi|221572848|gb|ACM23660.1| Methionyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] Length = 643 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 205/470 (43%), Positives = 307/470 (65%), Gaps = 2/470 (0%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I Y N++PHIG AY I+AD++AR+ R G DV F TGTDEHGQK+ +AAQ A Sbjct: 16 KFYITTPIYYVNSEPHIGSAYTTIVADIIARYKRFMGYDVFFLTGTDEHGQKVLQAAQQA 75 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G + F D+ + F+ + L I+ D FIRTT++ H T + K+ + GD+YKG Y Sbjct: 76 GKDPQKFCDELAEKFKQLWKELKITNDHFIRTTDETHMKTVQEFVAKMKENGDVYKGVYK 135 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY + E ++N+DEV K D + PV+W+EEE YFFRLS Y+D LL +YE HP+ Sbjct: 136 GWYCVPCETFWNEDEVVKEGDERLCPECRRPVKWVEEENYFFRLSKYRDALLKHYEEHPD 195 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 F+ P RRNE++ ++ GLKDLS++R +F WG+ + DDP++++YVW+DAL NY++ GY Sbjct: 196 FVEPDFRRNEMLKILEGGLKDLSITRTSFKWGVPMKDDPEHVIYVWVDALINYVSAIGYG 255 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 N + ++WPADLH+IGK+I RFH+I WPA L+S LPLP+KVF+HG++ G+KISK Sbjct: 256 WNEEMFN-RWWPADLHLIGKEINRFHSIIWPAMLMSVGLPLPEKVFAHGWLTVNGQKISK 314 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGN IDP ++ G D +RY+L+R+I GKDG + ++ L R+N+DLAN GNL+ R Sbjct: 315 SLGNAIDPRFFVKRYGNDVVRYYLIRDIVFGKDGDFSEERLVHRLNSDLANDYGNLLHRI 374 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +MI K ++G +P+P D + + M + + AL ++ +++ + Sbjct: 375 TAMINKYFNGKLPSPANEEGPDGWLKERFFETKNAYYDLMDSYRLTEALDRIWEFIADAN 434 Query: 426 RYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +YF+ KPW L K+ +R TVLY ++E + ++A++ +P + ++F Sbjct: 435 KYFNDTKPWVLAKEGKSERLGTVLYNSLEAVFKVALMTLPVMPDTSQEVF 484 >gi|29375514|ref|NP_814668.1| methionyl-tRNA synthetase [Enterococcus faecalis V583] gi|255971380|ref|ZP_05421966.1| methionyl-tRNA synthetase [Enterococcus faecalis T1] gi|255973998|ref|ZP_05424584.1| methionyl-tRNA synthetase [Enterococcus faecalis T2] gi|256617799|ref|ZP_05474645.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256761684|ref|ZP_05502264.1| methionyl-tRNA synthetase [Enterococcus faecalis T3] gi|256854227|ref|ZP_05559591.1| methionyl-tRNA synthetase [Enterococcus faecalis T8] gi|256957214|ref|ZP_05561385.1| methionyl-tRNA synthetase [Enterococcus faecalis DS5] gi|256960056|ref|ZP_05564227.1| methionyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|256964250|ref|ZP_05568421.1| methionyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|257077814|ref|ZP_05572175.1| methionyl-tRNA synthetase [Enterococcus faecalis JH1] gi|257083841|ref|ZP_05578202.1| methionyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|257089340|ref|ZP_05583701.1| methionyl-tRNA synthetase [Enterococcus faecalis CH188] gi|257418524|ref|ZP_05595518.1| methionyl-tRNA synthetase [Enterococcus faecalis T11] gi|257421174|ref|ZP_05598164.1| methionyl-tRNA synthetase [Enterococcus faecalis X98] gi|294780517|ref|ZP_06745880.1| methionine--tRNA ligase [Enterococcus faecalis PC1.1] gi|300859824|ref|ZP_07105912.1| methionine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|38258306|sp|Q837B3|SYM_ENTFA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|29342974|gb|AAO80738.1| methionyl-tRNA synthetase [Enterococcus faecalis V583] gi|255962398|gb|EET94874.1| methionyl-tRNA synthetase [Enterococcus faecalis T1] gi|255966870|gb|EET97492.1| methionyl-tRNA synthetase [Enterococcus faecalis T2] gi|256597326|gb|EEU16502.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256682935|gb|EEU22630.1| methionyl-tRNA synthetase [Enterococcus faecalis T3] gi|256709787|gb|EEU24831.1| methionyl-tRNA synthetase [Enterococcus faecalis T8] gi|256947710|gb|EEU64342.1| methionyl-tRNA synthetase [Enterococcus faecalis DS5] gi|256950552|gb|EEU67184.1| methionyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|256954746|gb|EEU71378.1| methionyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|256985844|gb|EEU73146.1| methionyl-tRNA synthetase [Enterococcus faecalis JH1] gi|256991871|gb|EEU79173.1| methionyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|256998152|gb|EEU84672.1| methionyl-tRNA synthetase [Enterococcus faecalis CH188] gi|257160352|gb|EEU90312.1| methionyl-tRNA synthetase [Enterococcus faecalis T11] gi|257162998|gb|EEU92958.1| methionyl-tRNA synthetase [Enterococcus faecalis X98] gi|294452344|gb|EFG20783.1| methionine--tRNA ligase [Enterococcus faecalis PC1.1] gi|300850642|gb|EFK78391.1| methionine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|323480110|gb|ADX79549.1| methionyl-tRNA synthetase/Methionine--tRNA ligase, MetRS [Enterococcus faecalis 62] Length = 669 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 215/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++E YI+T I YP+ + HIG++Y I D +AR+ RL G DV + TG DEHGQKI K Sbjct: 1 MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A VT K +VD+ + + + + LDISYD FIRTT+ H + ++ ++ ++GDIY Sbjct: 61 KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE ++ + EVY+ +G + + V+ ++EE YFFR+S Y D Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YYE HPEFI P R+NE+++ F+K GL+DL++SR TF WGI + +DP++++YVWID Sbjct: 181 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY D K+WPA++ ++GK+I+RFH IYWP L++ +LPLPKKVF H Sbjct: 241 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P ++E G+DALRY+L+R I G DG + + R+N D Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG +P T D + + + V+ + E M+ + Sbjct: 361 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470 A+A++ +LVS ++Y D PW L K R +V+ E +R +AILLQ + + Sbjct: 421 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 480 Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 KIF+ L + E +++ + PIFPR Sbjct: 481 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 521 >gi|257415492|ref|ZP_05592486.1| methionyl-tRNA synthetase [Enterococcus faecalis AR01/DG] gi|257157320|gb|EEU87280.1| methionyl-tRNA synthetase [Enterococcus faecalis ARO1/DG] Length = 669 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 215/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++E YI+T I YP+ + HIG++Y I D +AR+ RL G DV + TG DEHGQKI K Sbjct: 1 MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A VT K +VD+ + + + + LDISYD FIRTT+ H + ++ ++ ++GDIY Sbjct: 61 KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQRIFDRLVEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE ++ + EVY+ +G + + V+ ++EE YFFR+S Y D Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YYE HPEFI P R+NE+++ F+K GL+DL++SR TF WGI + +DP++++YVWID Sbjct: 181 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY D K+WPA++ ++GK+I+RFH IYWP L++ +LPLPKKVF H Sbjct: 241 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P ++E G+DALRY+L+R I G DG + + R+N D Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG +P T D + + + V+ + E M+ + Sbjct: 361 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470 A+A++ +LVS ++Y D PW L K R +V+ E +R +AILLQ + + Sbjct: 421 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 480 Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 KIF+ L + E +++ + PIFPR Sbjct: 481 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 521 >gi|225874399|ref|YP_002755858.1| methionine--tRNA ligase [Acidobacterium capsulatum ATCC 51196] gi|225793634|gb|ACO33724.1| methionine--tRNA ligase [Acidobacterium capsulatum ATCC 51196] Length = 770 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 231/539 (42%), Positives = 323/539 (59%), Gaps = 41/539 (7%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E +K Y++T I Y NA+PHIG +Y ++AD +AR R G++ F TGTDEHGQKI + Sbjct: 1 MPESKKFYLTTPIYYVNARPHIGTSYTTLVADTIARRKRALGIETWFLTGTDEHGQKIER 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 +A+ AG + + F D+ S FR + D + + YDD+IRTTE RH + L+ + ++G IY Sbjct: 61 SAEKAGCSPQEFTDEVSAQFRGLWDRMGLEYDDYIRTTEPRHKRGVQKLFALLKERGYIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y+G Y + DEAY + G G + + EE YFF+LSA++ LL YY Sbjct: 121 KGTYTGQYCVSDEAYVD------GPPGIACPDCGRITETVSEENYFFKLSAFERTLLEYY 174 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E+HPEFI P RRNEV+SFV+SGLKDLS+SR +F+WGI +P D ++++YVW+DAL NY+T Sbjct: 175 EAHPEFIQPETRRNEVLSFVRSGLKDLSISRTSFNWGIPVPGDEKHVIYVWMDALANYIT 234 Query: 241 TTGYLDN---PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 + G+ AKFWPADLH+IGK+I RFH +YWPAFL++A LPLPK + +HG++L Sbjct: 235 SLGWESEDAAARARFAKFWPADLHIIGKEISRFHCVYWPAFLMAAGLPLPKSIVAHGWLL 294 Query: 298 HKGEKISKSLGNVIDPIEVI---------------EEVGVDALRYFLVREIACGKDGFYD 342 + K+SKS GN++ ++ + G D LRYFL+RE+ G+DG + Sbjct: 295 FEQNKMSKSRGNIVRAETILDVFGAMKPDLPKAGQDRFGADVLRYFLLREVVFGQDGSFS 354 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEI 401 D L +R NADLANG GNLVSR++SMI K +DG++P GA E E+ +R L Sbjct: 355 FDALVQRYNADLANGYGNLVSRTLSMIQKYFDGVVPANDGASAEIGEA----AARTLTAF 410 Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV-----LYVTVEVIR 456 E+M RAL V +LV VD Y AQ PW+ K+ D A LY E IR Sbjct: 411 DEHMAGLDFSRALETVWTLVGAVDGYLTAQAPWKQKEGVTDDAQAALRARSLYTAAEAIR 470 Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR------LKPGFMLHKTFDPIFPR 509 + L+ +P A +++ L + D + + + L+PG L P+FPR Sbjct: 471 VITTLVYPVMPWAAAQVWAQLGLGDIEAAAKRGELKNLAWGGLQPGTKLG-VLGPVFPR 528 >gi|153938113|ref|YP_001389440.1| methionyl-tRNA synthetase [Clostridium botulinum F str. Langeland] gi|152934009|gb|ABS39507.1| methionine--tRNA ligase [Clostridium botulinum F str. Langeland] gi|295317546|gb|ADF97923.1| methionine--tRNA ligase [Clostridium botulinum F str. 230613] Length = 645 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 204/469 (43%), Positives = 310/469 (66%), Gaps = 7/469 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I YP+A+ HIG+ Y + AD LARF RL G DV+F TGTDEHGQKI + A+ V Sbjct: 7 YVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEAKKV 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K +VD+ +++ +++I YD FIRTT++ H + + ++K + + GDIYK YSGW Sbjct: 67 TPKAYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYENGDIYKSEYSGW 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + PV+ +EE YFF++S Y KL+ Y ESHPEFI Sbjct: 127 YCTPCESFWTETQL---EDGKCPDCGR-PVEKAKEEAYFFKMSKYAPKLIEYIESHPEFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R+NE+++ F+K GL+DL +SR +FDWGI + D ++++YVWIDAL NY+T GY Sbjct: 183 QPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDDKHVIYVWIDALANYITALGYST 242 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D K+WPAD+H++GKDILRFH IYWP L++ ++PLPK+VF HG++L G K+SKS Sbjct: 243 EKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGGKMSKS 302 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNV+DP+ ++ G D +RY+L+REI G DG ++ + K++N+DLAN +GNL+SR+V Sbjct: 303 KGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNLLSRTV 362 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +MI K +DG IP + DE ++ + +++ E+M+ I AL ++ + + ++ Sbjct: 363 AMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEESMEKLRIPEALEEIWTFIGRANK 422 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 Y D PW L K + R TVLY E +R +++ + AF+P+ + KI Sbjct: 423 YIDETTPWILAKDESKKGRLGTVLYNLAESLRIISVCISAFIPETSIKI 471 >gi|257081173|ref|ZP_05575534.1| methionyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|257086267|ref|ZP_05580628.1| methionyl-tRNA synthetase [Enterococcus faecalis D6] gi|256989203|gb|EEU76505.1| methionyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|256994297|gb|EEU81599.1| methionyl-tRNA synthetase [Enterococcus faecalis D6] Length = 669 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 215/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++E YI+T I YP+ + HIG++Y I D +AR+ RL G DV + TG DEHGQKI K Sbjct: 1 MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A VT K +VD+ + + + + LDISYD FIRTT+ H + ++ ++ ++GDIY Sbjct: 61 KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE ++ + EVY+ +G + + V+ ++EE YFFR+S Y D Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YYE HPEFI P R+NE+++ F+K GL+DL++SR TF WGI + +DP++++YVWID Sbjct: 181 RLVEYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY D K+WPA++ ++GK+I+RFH IYWP L++ +LPLPKKVF H Sbjct: 241 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P ++E G+DALRY+L+R I G DG + + R+N D Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG +P T D + + + V+ + E M+ + Sbjct: 361 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470 A+A++ +LVS ++Y D PW L K R +V+ E +R +AILLQ + + Sbjct: 421 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 480 Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 KIF+ L + E +++ + PIFPR Sbjct: 481 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 521 >gi|315032441|gb|EFT44373.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0017] Length = 677 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 215/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++E YI+T I YP+ + HIG++Y I D +AR+ RL G DV + TG DEHGQKI K Sbjct: 9 MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 68 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A VT K +VD+ + + + + LDISYD FIRTT+ H + ++ ++ ++GDIY Sbjct: 69 KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 128 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE ++ + EVY+ +G + + V+ ++EE YFFR+S Y D Sbjct: 129 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 188 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YYE HPEFI P R+NE+++ F+K GL+DL++SR TF WGI + +DP++++YVWID Sbjct: 189 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 248 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY D K+WPA++ ++GK+I+RFH IYWP L++ +LPLPKKVF H Sbjct: 249 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 308 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P ++E G+DALRY+L+R I G DG + + R+N D Sbjct: 309 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 368 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG +P T D + + + V+ + E M+ + Sbjct: 369 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 428 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470 A+A++ +LVS ++Y D PW L K R +V+ E +R +AILLQ + + Sbjct: 429 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 488 Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 KIF+ L + E +++ + PIFPR Sbjct: 489 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 529 >gi|295113880|emb|CBL32517.1| methionyl-tRNA synthetase [Enterococcus sp. 7L76] Length = 669 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 215/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++E YI+T I YP+ + HIG++Y I D +AR+ RL G DV + TG DEHGQKI K Sbjct: 1 MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A VT K +VD+ + + + + LDISYD FIRTT+ H + ++ ++ ++GDIY Sbjct: 61 KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE ++ + EVY+ +G + + V+ ++EE YFFR+S Y D Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YYE HPEFI P R+NE+++ F+K GL+DL++SR TF WGI + +DP++++YVWID Sbjct: 181 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY D K+WPA++ ++GK+I+RFH IYWP L++ +LPLPKKVF H Sbjct: 241 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P ++E G+DALRY+L+R I G DG + + R+N D Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG +P T D + + + V+ + E M+ + Sbjct: 361 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470 A+A++ +LVS ++Y D PW L K R +V+ E +R +AILLQ + + Sbjct: 421 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 480 Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 KIF+ L + E +++ + PIFPR Sbjct: 481 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 521 >gi|315148087|gb|EFT92103.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4244] Length = 677 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 215/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++E YI+T I YP+ + HIG++Y I D +AR+ RL G DV + TG DEHGQKI K Sbjct: 9 MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 68 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A VT K +VD+ + + + + LDISYD FIRTT+ H + ++ ++ ++GDIY Sbjct: 69 KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 128 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE ++ + EVY+ +G + + V+ ++EE YFFR+S Y D Sbjct: 129 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 188 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YYE HPEFI P R+NE+++ F+K GL+DL++SR TF WGI + +DP++++YVWID Sbjct: 189 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 248 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY D K+WPA++ ++GK+I+RFH IYWP L++ +LPLPKKVF H Sbjct: 249 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 308 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P ++E G+DALRY+L+R I G DG + + R+N D Sbjct: 309 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 368 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG +P T D + + + V+ + E M+ + Sbjct: 369 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 428 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470 A+A++ +LVS ++Y D PW L K R +V+ E +R +AILLQ + + Sbjct: 429 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 488 Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 KIF+ L + E +++ + PIFPR Sbjct: 489 EKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 529 >gi|227517850|ref|ZP_03947899.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0104] gi|227555041|ref|ZP_03985088.1| methionyl-tRNA synthetase [Enterococcus faecalis HH22] gi|229546775|ref|ZP_04435500.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|229548866|ref|ZP_04437591.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|293383808|ref|ZP_06629715.1| methionine--tRNA ligase [Enterococcus faecalis R712] gi|293388716|ref|ZP_06633209.1| methionine--tRNA ligase [Enterococcus faecalis S613] gi|307268005|ref|ZP_07549393.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|307271930|ref|ZP_07553198.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0855] gi|307275347|ref|ZP_07556490.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|307278375|ref|ZP_07559450.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|307290946|ref|ZP_07570836.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|312901528|ref|ZP_07760801.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0470] gi|312904490|ref|ZP_07763649.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|312906976|ref|ZP_07765972.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|312952803|ref|ZP_07771665.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|312978767|ref|ZP_07790494.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|227074693|gb|EEI12656.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0104] gi|227175828|gb|EEI56800.1| methionyl-tRNA synthetase [Enterococcus faecalis HH22] gi|229305887|gb|EEN71883.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|229308124|gb|EEN74111.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|291078884|gb|EFE16248.1| methionine--tRNA ligase [Enterococcus faecalis R712] gi|291081873|gb|EFE18836.1| methionine--tRNA ligase [Enterococcus faecalis S613] gi|306498016|gb|EFM67543.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|306504881|gb|EFM74076.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|306507981|gb|EFM77108.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|306511436|gb|EFM80438.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0855] gi|306515646|gb|EFM84173.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|310626961|gb|EFQ10244.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|310629319|gb|EFQ12602.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|310632188|gb|EFQ15471.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|311288474|gb|EFQ67030.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|311291323|gb|EFQ69879.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0470] gi|315029800|gb|EFT41732.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4000] gi|315034325|gb|EFT46257.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0027] gi|315145783|gb|EFT89799.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2141] gi|315149690|gb|EFT93706.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0012] gi|315153002|gb|EFT97018.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0031] gi|315155233|gb|EFT99249.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0043] gi|315157560|gb|EFU01577.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0312] gi|315163011|gb|EFU07028.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0645] gi|315167934|gb|EFU11951.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1341] gi|315172032|gb|EFU16049.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1342] gi|315173438|gb|EFU17455.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1346] gi|315574157|gb|EFU86348.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0309B] gi|315577288|gb|EFU89479.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0630] gi|315581700|gb|EFU93891.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0309A] gi|327534510|gb|AEA93344.1| methionine--tRNA ligase [Enterococcus faecalis OG1RF] gi|329574121|gb|EGG55698.1| methionine--tRNA ligase [Enterococcus faecalis TX1467] Length = 677 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 215/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++E YI+T I YP+ + HIG++Y I D +AR+ RL G DV + TG DEHGQKI K Sbjct: 9 MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 68 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A VT K +VD+ + + + + LDISYD FIRTT+ H + ++ ++ ++GDIY Sbjct: 69 KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 128 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE ++ + EVY+ +G + + V+ ++EE YFFR+S Y D Sbjct: 129 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 188 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YYE HPEFI P R+NE+++ F+K GL+DL++SR TF WGI + +DP++++YVWID Sbjct: 189 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 248 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY D K+WPA++ ++GK+I+RFH IYWP L++ +LPLPKKVF H Sbjct: 249 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 308 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P ++E G+DALRY+L+R I G DG + + R+N D Sbjct: 309 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 368 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG +P T D + + + V+ + E M+ + Sbjct: 369 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 428 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470 A+A++ +LVS ++Y D PW L K R +V+ E +R +AILLQ + + Sbjct: 429 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 488 Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 KIF+ L + E +++ + PIFPR Sbjct: 489 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 529 >gi|315027115|gb|EFT39047.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2137] Length = 677 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 215/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++E YI+T I YP+ + HIG++Y I D +AR+ RL G DV + TG DEHGQKI K Sbjct: 9 MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 68 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A VT K +VD+ + + + + LDISYD FIRTT+ H + ++ ++ ++GDIY Sbjct: 69 KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 128 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE ++ + EVY+ +G + + V+ ++EE YFFR+S Y D Sbjct: 129 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 188 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YYE HPEFI P R+NE+++ F+K GL+DL++SR TF WGI + +DP++++YVWID Sbjct: 189 RLVEYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 248 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY D K+WPA++ ++GK+I+RFH IYWP L++ +LPLPKKVF H Sbjct: 249 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 308 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P ++E G+DALRY+L+R I G DG + + R+N D Sbjct: 309 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 368 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG +P T D + + + V+ + E M+ + Sbjct: 369 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 428 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470 A+A++ +LVS ++Y D PW L K R +V+ E +R +AILLQ + + Sbjct: 429 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 488 Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 KIF+ L + E +++ + PIFPR Sbjct: 489 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 529 >gi|242241575|ref|ZP_04796020.1| methionyl-tRNA synthetase [Staphylococcus epidermidis W23144] gi|242234956|gb|EES37267.1| methionyl-tRNA synthetase [Staphylococcus epidermidis W23144] Length = 656 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 218/521 (41%), Positives = 329/521 (63%), Gaps = 15/521 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ +++ L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTELEYLDEMISGIKNLWSKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y GWYS+ DE YY + D VY+ G+ ++ H V+ ++EE YFF ++ Y D+L Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGKIVGGKSPDSGHE-VELVKEESYFFNINKYTDRL 181 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 L +Y+ +P+FI P R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL Sbjct: 182 LEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+HG+ Sbjct: 242 VNYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N DLA Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNLV+R++SMI K + G +P G E DE + ++ ++ +NM++ AL Sbjct: 362 NDLGNLVNRTISMINKYFHGELPAYQGPKHELDEKMEAMALETVKSFNDNMESLQFSVAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 + V +S ++Y D +PW L K R V+ VE IR ILLQ F+ + Sbjct: 422 STVWKFISRTNKYIDETQPWVLAKDENQREMLGNVMAHLVENIRFATILLQPFLTHAPRE 481 Query: 473 IFDILFVADENRC-FQSLDQ--RLKPGFMLHKTFDPIFPRF 510 IF L + + + SL Q L + + PIFPR Sbjct: 482 IFKQLNINNPDLYQLDSLQQYGMLSEAITVTEKPTPIFPRL 522 >gi|300853381|ref|YP_003778365.1| methionyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] gi|300433496|gb|ADK13263.1| methionyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] Length = 644 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 205/477 (42%), Positives = 314/477 (65%), Gaps = 7/477 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+A+ HIG+ Y + AD LARF RL G DV+ TGTDEHGQKI + A+ Sbjct: 3 KKTYYITTPIYYPSAKLHIGNTYTTVAADALARFKRLTGYDVMLLTGTDEHGQKIQRLAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT +VD+ + + D+++ISYD FIRTTE H + ++KK+ D+GDIYKG Sbjct: 63 AKGVTPIEYVDEIVAGIKKLWDMMNISYDKFIRTTEDYHVKAVQKIFKKLYDQGDIYKGS 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + + ADG+ + PV+ +EE YFF++S Y KL+ Y E H Sbjct: 123 YEGLYCTPCESFWTETQ---AADGKCPDCGR-PVEKTKEEAYFFKMSKYAPKLIKYIEDH 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI P R+NE+++ F++ GL+DL +SR +F+WGI + D ++++YVWIDAL NY+T Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFNWGIPVTFDEKHVIYVWIDALANYITAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY + K+WPAD+H++GKDILRFH IYWP L++ LP+PKKVF HG++L G K Sbjct: 239 GYGSKNEELYNKYWPADVHLVGKDILRFHTIYWPIMLMALGLPVPKKVFGHGWLLVDGGK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ +++ G DA+RY+L+REI G DG ++ + KR+NADLAN +GNL+ Sbjct: 299 MSKSKGNVVDPVVLVDNFGADAVRYYLLREIPFGSDGLFNNEIFIKRINADLANDLGNLL 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+ +M+ K +DG++ P + D+ ++ + +++ +NM + I AL + L++ Sbjct: 359 SRTCAMVEKYFDGVVQEPTKKEQIDDELIKLALETPEKVEKNMNDLRIPEALDNIWDLIT 418 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++Y D PW L K + DR TVLY +E +R ++I + ++P+ + K++ L Sbjct: 419 RSNKYIDETTPWILAKDESKKDRLGTVLYNLLESLRIISICVSPYLPETSAKMYKQL 475 >gi|326789740|ref|YP_004307561.1| methionyl-tRNA synthetase [Clostridium lentocellum DSM 5427] gi|326540504|gb|ADZ82363.1| methionyl-tRNA synthetase [Clostridium lentocellum DSM 5427] Length = 658 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 216/508 (42%), Positives = 326/508 (64%), Gaps = 10/508 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I YP+ + HIGH+Y + AD +AR+ RL G DV+F TGTDEHGQKI + A GV Sbjct: 7 YITTPIYYPSNKLHIGHSYTTVAADAMARYKRLRGYDVMFLTGTDEHGQKIERRAAEDGV 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + FVD +D+ +DISYD FIRTT+K H +T + ++KK+ DKGDIYK Y G Sbjct: 67 TPQAFVDHIVDWIKDLWKTMDISYDKFIRTTDKEHEETVQKIFKKLYDKGDIYKSEYEGL 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + PV+ ++EE YFF+LSAYQD+L+ + E +P+FI Sbjct: 127 YCTPCESFFTEHQL---VDGKCPDCGR-PVEKVKEESYFFKLSAYQDRLIKHIEENPDFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R+NE+++ F++ GL+DL +SR +F WGI + DP +++YVW+DAL+NY++ GYL Sbjct: 183 QPNTRQNEMLNNFLRPGLEDLCVSRTSFKWGIPVEFDPGHVVYVWLDALSNYISALGYLQ 242 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D + +FWPAD+H++GK+I+RFH I WPA L++ +LPLPK++F HG+++ G K+SKS Sbjct: 243 ADDANFKRFWPADVHLVGKEIVRFHTIIWPAMLMAMDLPLPKQIFGHGWLVINGGKMSKS 302 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 G V+DP ++ G DA+RYFL+REIA G+DG + + L R+N+DLAN +GNL SR+V Sbjct: 303 QGTVVDPSVLVGRYGSDAIRYFLLREIAFGQDGNFSNEALISRINSDLANDLGNLTSRTV 362 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +MI K Y G +P E D + V + ++ NM+ + AL + ++ +++ Sbjct: 363 AMIEK-YFGTLPEVQEGNEFDVDVQKVVKEQIAKMESNMEKLFFNNALEDIWVIIRRMNK 421 Query: 427 YFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIF-DILFVADEN 483 Y D PW L K + A + VLY EVIR ++I+++ F+P+ KI+ V E Sbjct: 422 YIDETMPWVLAKDEANHAKLAGVLYTLSEVIRIVSIMIEPFMPQTPEKIWAQFGIVRGEL 481 Query: 484 RCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510 + S+ Q P + K + +FPR Sbjct: 482 TAWDSIHQFGALPRTVAAKKGENMFPRI 509 >gi|291537807|emb|CBL10918.1| methionyl-tRNA synthetase [Roseburia intestinalis XB6B4] Length = 665 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 213/481 (44%), Positives = 319/481 (66%), Gaps = 13/481 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + K Y++TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI + Sbjct: 1 MSSKGKFYMTTAIAYTSGKPHIGNTYEIVLADAIARFRRQEGYDVYFQTGTDEHGQKIQE 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T K +VD + + + D+++ SYD+F+RTT++ H + ++KK+ DKGDIY Sbjct: 61 KAEKAGITPKEYVDNVAGEVKRIWDLMNTSYDNFVRTTDEDHEKQVKKIFKKLYDKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y E+++ + ++ DG+ + VQ +EE YFF++S Y DKL++Y Sbjct: 121 KGSYEGLYCTPCESFWTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADKLINYI 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+ Sbjct: 177 NEHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDPKHVVYVWLDALTNYI 236 Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 T GY + DG+ + K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H + Sbjct: 237 TKIGY--DADGNSSDLFNKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPW 294 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L GEK+SKS GNVI ++ + GVDA RYF++ E+ DG D + +R N+DLA Sbjct: 295 LLQGGEKMSKSKGNVIYADDMADLFGVDATRYFVLHEMPFENDGIITWDLVIERYNSDLA 354 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N +GNLV+R++SM K +DG++ + G E D + +V + ++ E M+N + A+ Sbjct: 355 NILGNLVNRTISMSNKYFDGVVKSTGVTEEVDADLKAVVTSARDKVAEKMKNLRVADAIT 414 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +V +L ++Y D PW L K DR + VLY VE I A LL++F+P+ A++I Sbjct: 415 EVFNLFRRCNKYIDETAPWVLAKDEAAKDRLAEVLYNLVESITIGACLLKSFLPETADRI 474 Query: 474 F 474 Sbjct: 475 L 475 >gi|257867079|ref|ZP_05646732.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257873414|ref|ZP_05653067.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257877159|ref|ZP_05656812.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC20] gi|257801135|gb|EEV30065.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257807578|gb|EEV36400.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257811325|gb|EEV40145.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC20] Length = 668 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 214/521 (41%), Positives = 324/521 (62%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+E YI+T I YP+ + HIG++Y I D +AR+ RL G DV + TG DEHGQKI K Sbjct: 1 MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAVARYKRLMGFDVFYLTGVDEHGQKIEK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GV + +VD+ + + + + + LDISYD FIRTT+ H + +++++ D+GDIY Sbjct: 61 KAEELGVDPQEYVDKMAADVKKLWNTLDISYDKFIRTTDDYHKKAVQKIFQQLLDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVY+ +G+ + + V+ ++E YFFR+S Y D Sbjct: 121 LGEYEGWYSVSDEEYFTETQLAEVYRDEEGKVIGGKAPSGHEVELVKESSYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YY+ HPEFI P R+NE+++ F+K GL+DL++SR TF WGI + P++++YVWID Sbjct: 181 RLVEYYDEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFKWGIPVTASPEHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPKK+F H Sbjct: 241 ALSNYITALGYGSDDDSLFQKYWPADVHMVGKEIVRFHTIYWPIMLMALDLPLPKKIFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+++ K K+SKS GNV+ P ++E +DALRY+L+R + G DG + + R+N D Sbjct: 301 GWLMMKDGKMSKSKGNVVYPEMLVERYSLDALRYYLLRAVPFGSDGVFTPEDFVSRLNYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG++P T D + + + V+ E M Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASKVTPFDSELSTTAANVVGRYHEAMDKMEFST 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL++V +L+S ++Y D +PW L K RA ++V+ E +R +AILLQ + + Sbjct: 421 ALSEVWTLISRANKYIDETQPWVLAKEEEKRAELNSVMVHLAESLRIVAILLQPVMTETP 480 Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 IF L +A + L G + PIFPR Sbjct: 481 ANIFQQLGLASVAMDLKDLRFGEFPSGTKVVAKGTPIFPRL 521 >gi|302390850|ref|YP_003826670.1| methionyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] gi|302202927|gb|ADL11605.1| methionyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] Length = 644 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 205/511 (40%), Positives = 323/511 (63%), Gaps = 9/511 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ Y++T I YPN + HIGH Y AD + +F L G + TG+DEHGQK+ K A+ Sbjct: 3 KDTFYVTTPIYYPNDKLHIGHTYTTTAADTVVKFKELQGYETELITGSDEHGQKLQKTAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ ++D + F+++ L++ Y +F+RTT + H + ++KKI DKGDIYK Sbjct: 63 EHGMEPLGYIDGIVKTFKELWSTLEVDYTEFVRTTSQEHKKDVQHIFKKIYDKGDIYKDK 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G+Y E Y+ + E+ + + N PV+W+EEE YFF++S Y+++LL + + + Sbjct: 123 YEGYYCTPCETYWAERELDEEGNCPDCN---RPVEWVEEESYFFKMSEYEEQLLEFLDDN 179 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P +RRNE+I+F++ GL+DL +SR +FDWGI +P D +++YVW DAL +YLT G Sbjct: 180 PDFIQPAKRRNEMINFIEEGLEDLCVSRTSFDWGIPVPIDGDHVIYVWFDALISYLTGIG 239 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 + + D +WPAD+H++GKDILRFH I WPA L++A++ LPK+VF HGF+ +G K+ Sbjct: 240 FRRDED-KFGSYWPADVHIVGKDILRFHTIIWPAILMAADMELPKQVFGHGFLTVEGGKM 298 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP +++ + GVDA+RY+L+RE+A G DG Y + +R+N+DLAN +GNL++ Sbjct: 299 SKSKGNVVDPTKLVNDFGVDAVRYYLMREVAFGTDGSYSTESFIRRINSDLANDLGNLLN 358 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+V+M+ + +DG+IP P + TE D + + L + ++M+N AL + +++ Sbjct: 359 RTVAMVEQYFDGVIPEPRSETEYDADLKKTSQQELAAMADDMENLQFSTALEHLWTVIRR 418 Query: 424 VDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA- 480 ++Y D PW L K D+ TVLY +E +R AI L+ F+P+ KI+ + + Sbjct: 419 TNKYIDQTTPWILAKDEDKQDKLGTVLYNLLEALRITAIALKPFLPEAPAKIWQQIGIKA 478 Query: 481 --DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 D+ R + + L + DPIFPR Sbjct: 479 DLDQQRWSEVEEWGLLEAGLEVNPGDPIFPR 509 >gi|222093808|ref|YP_002527857.1| methionyl-tRNA synthetase [Bacillus cereus Q1] gi|221237855|gb|ACM10565.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus cereus Q1] Length = 626 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 214/491 (43%), Positives = 323/491 (65%), Gaps = 16/491 (3%) Query: 34 LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93 +AR+ R+ G +V + TGTDEHGQKI K A+ VT + +VD +++ + +DISYDD Sbjct: 1 MARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNVTPQAYVDNIVAGIKELWEKMDISYDD 60 Query: 94 FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND----DEVYKG---AD 146 FIRTTE RH D ++K++ D+GDIY Y GWYS++DE +Y + D + +G Sbjct: 61 FIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKVVG 120 Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLK 205 G+ ++ H+ V+ + EE YFFR+ Y D+LL +YE +P FI P R+NE+I+ F+K GL+ Sbjct: 121 GKSPDSGHD-VELVREESYFFRMGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLE 179 Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265 DL++SR +FDWG+++P +P++++YVW+DAL+NY+T GY + KFWPAD+H++GK Sbjct: 180 DLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGK 239 Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 +I+RFH IYWP L++ +LPLPKKVF+HG+IL K K+SKS GNV+DP+ +I+ G+DAL Sbjct: 240 EIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDAL 299 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFT 384 RY+L+RE+ G DG + +G +R+N DLAN +GNL++R+V+MI K ++G IP T Sbjct: 300 RYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYFNGEIPAFKENVT 359 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 E DE++++ L+++ E M+N AL+ + LVS ++Y D +PW L K DR Sbjct: 360 EFDETLVTFAKDTLKKVEEAMENMEFSVALSSIWQLVSRTNKYIDETQPWVLAKDENDRE 419 Query: 445 --STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-CFQSLDQ--RLKPGFML 499 ++V+ EV+RQ I+L F+ +K+F L + DE + SL + G + Sbjct: 420 KLASVMAHLAEVLRQTGIMLMPFLTVAPSKMFAQLGLTDEAHISWGSLSTIGCIPAGTKV 479 Query: 500 HKTFDPIFPRF 510 K PIFPR Sbjct: 480 EKG-QPIFPRL 489 >gi|325568422|ref|ZP_08144789.1| methionine--tRNA ligase [Enterococcus casseliflavus ATCC 12755] gi|325158191|gb|EGC70344.1| methionine--tRNA ligase [Enterococcus casseliflavus ATCC 12755] Length = 668 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 214/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+E YI+T I YP+ + HIG++Y I D +AR+ RL G DV + TG DEHGQKI K Sbjct: 1 MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAVARYKRLMGFDVFYLTGVDEHGQKIEK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GV + +VD+ + + + + + LDISYD FIRTT+ H + +++++ D+GDIY Sbjct: 61 KAEELGVDPQEYVDKMAADVKKLWNTLDISYDKFIRTTDDYHKTAVQKIFQQLLDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVY+ +G+ + + V+ ++E YFFR+S Y D Sbjct: 121 LGEYEGWYSVSDEEYFTETQLAEVYRDEEGKVIGGKAPSGHEVELVKESSYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YY+ HPEFI P R+NE+++ F+K GL+DL++SR TF WGI + P++++YVWID Sbjct: 181 RLVQYYDEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFKWGIPVTASPEHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPKK+F H Sbjct: 241 ALSNYITALGYGSEDDSLFQKYWPADVHMVGKEIVRFHTIYWPIMLMALDLPLPKKIFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+++ K K+SKS GNV+ P ++E +DALRY+L+R + G DG + + R+N D Sbjct: 301 GWLMMKDGKMSKSKGNVVYPEMLVERYSLDALRYYLLRAVPFGSDGVFTPEDFVSRLNYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG++P T D + + + V+ E M Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASKVTPFDSELSTTAANVVGRYHEAMDKMEFST 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL++V +L+S ++Y D +PW L K RA ++V+ E +R +AILLQ + + Sbjct: 421 ALSEVWTLISRANKYIDETQPWVLAKEEEKRAELNSVMVHLAESLRIVAILLQPVMTETP 480 Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 IF L +A + L G + PIFPR Sbjct: 481 ANIFQQLGLASVAMDLKDLRFGEFPSGTKVVAKGTPIFPRL 521 >gi|240145103|ref|ZP_04743704.1| methionine--tRNA ligase [Roseburia intestinalis L1-82] gi|257202775|gb|EEV01060.1| methionine--tRNA ligase [Roseburia intestinalis L1-82] Length = 665 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 213/481 (44%), Positives = 319/481 (66%), Gaps = 13/481 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + K Y++TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI + Sbjct: 1 MSSKGKFYMTTAIAYTSGKPHIGNTYEIVLADAIARFRRQEGYDVYFQTGTDEHGQKIQE 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T K +VD + + + D+++ SYD+F+RTT++ H + ++KK+ DKGDIY Sbjct: 61 KAEKAGITPKEYVDNVAGEVKRIWDLMNTSYDNFVRTTDEDHEKQVKKIFKKLYDKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y E+++ + ++ DG+ + VQ +EE YFF++S Y DKL++Y Sbjct: 121 KGSYEGLYCTPCESFWTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADKLINYI 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+ Sbjct: 177 NEHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDPKHVVYVWLDALTNYI 236 Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 T GY + DG+ + K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H + Sbjct: 237 TKIGY--DADGNSSDLFNKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPW 294 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L GEK+SKS GNVI ++ + GVDA RYF++ E+ DG D + +R N+DLA Sbjct: 295 LLQGGEKMSKSKGNVIYADDMADLFGVDATRYFVLHEMPFENDGIITWDLVIERYNSDLA 354 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N +GNLV+R++SM K +DG++ + G E D + +V + ++ E M+N + A+ Sbjct: 355 NILGNLVNRTISMSNKYFDGVVKSTGVTEEVDADLKAVVTSARDKVAEKMKNLRVADAIT 414 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +V +L ++Y D PW L K DR + VLY VE I A LL++F+P+ A++I Sbjct: 415 EVFNLFRRCNKYIDETAPWVLAKDEAAKDRLAEVLYNLVESITIGACLLKSFLPETADRI 474 Query: 474 F 474 Sbjct: 475 L 475 >gi|307297529|ref|ZP_07577335.1| methionyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2] gi|306916789|gb|EFN47171.1| methionyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2] Length = 635 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 213/515 (41%), Positives = 324/515 (62%), Gaps = 21/515 (4%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 EK Y++T I Y N++PHIG AY I+ADV+AR+ RL G DV F TGTDEHGQK+ A Sbjct: 2 EKFYVTTPIYYINSEPHIGSAYSTIVADVIARYRRLSGYDVFFLTGTDEHGQKVLNEAIE 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 V + + D+ + F+ + L+++ D F+RTT++ H T + K+ + GD+YKG Y Sbjct: 62 RNVEAQKYCDEMAEKFKALWKELELTNDAFVRTTDEYHMKTVQTFVSKLKENGDVYKGKY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY + DE ++N++++ +G+ V+W+ EE YFFRLS Y D LL +Y+ +P Sbjct: 122 EGWYCIPDETFWNEEDL---KEGRTCPECGREVKWVSEENYFFRLSKYNDILLRFYKENP 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +F+ P RRNE++ ++SGLKDLS++R +FDWG+ +PDDP++++YVW+DAL NYL+ GY Sbjct: 179 QFVQPDFRRNEMLRILESGLKDLSITRTSFDWGVPMPDDPEHVIYVWVDALINYLSAIGY 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 N D + ++WPAD+H+IGK+I RFH+I WPA LLSA LPLPK++++HG++ G+KIS Sbjct: 239 PHNIDHFE-RYWPADVHLIGKEINRFHSIIWPAMLLSAGLPLPKQIYAHGWLTVNGQKIS 297 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSLGN I P+ + G DALRY+L+R+I G+DG + + L R+NADLAN +GNL+ R Sbjct: 298 KSLGNAISPVAFVRTYGNDALRYYLLRDIQFGRDGDFSETNLISRINADLANDLGNLLHR 357 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 +V MI K DG +P DE ++ + + E+M N +AL V L+ Sbjct: 358 TVVMIQKFNDGAVPERSITETIDEDLVELGEKTFSAYTESMDNMRFTQALESVWELIRFG 417 Query: 425 DRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++Y D +PW++ K P+ R TVL+ V ++ ++I+++ + + A +I L Sbjct: 418 NKYIDLTEPWKMGK-KPEMKGRLDTVLHNLVCTLKNVSIMIEPVMFRTAREIRKRLGFGG 476 Query: 482 ----ENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 EN + + +R+ G +PIFPR Sbjct: 477 TMTLENVSWSDIVAGKRVSHG-------EPIFPRI 504 >gi|291537672|emb|CBL10784.1| methionyl-tRNA synthetase [Roseburia intestinalis M50/1] Length = 665 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 213/481 (44%), Positives = 319/481 (66%), Gaps = 13/481 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + K Y++TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI + Sbjct: 1 MSSKGKFYMTTAIAYTSGKPHIGNTYEIVLADAIARFRRQEGYDVYFQTGTDEHGQKIQE 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T K +VD + + + D+++ SYD+F+RTT++ H + ++KK+ DKGDIY Sbjct: 61 KAEKAGITPKEYVDNVAGEVKRIWDLMNTSYDNFVRTTDEDHEKQVKKIFKKLYDKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y E+++ + ++ DG+ + VQ +EE YFF++S Y DKL++Y Sbjct: 121 KGSYEGLYCTPCESFWTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADKLINYI 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+ Sbjct: 177 NEHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDPKHVVYVWLDALTNYI 236 Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 T GY + DG+ + K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H + Sbjct: 237 TKIGY--DADGNSSDLFNKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPW 294 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L GEK+SKS GNVI ++ + GVDA RYF++ E+ DG D + +R N+DLA Sbjct: 295 LLQGGEKMSKSKGNVIYADDMADLFGVDATRYFVLHEMPFENDGIITWDLVIERYNSDLA 354 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N +GNLV+R++SM K +DG++ + G E D + +V + ++ E M+N + A+ Sbjct: 355 NILGNLVNRTISMSNKYFDGVVKSTGVTEEVDADLKAVVTSARDKVAEKMKNLRVADAIT 414 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +V +L ++Y D PW L K DR + VLY VE I A LL++F+P+ A++I Sbjct: 415 EVFNLFRRCNKYIDETAPWVLAKDEAAKDRLAEVLYNLVESITIGACLLKSFLPETADRI 474 Query: 474 F 474 Sbjct: 475 L 475 >gi|304407079|ref|ZP_07388733.1| methionyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] gi|304344066|gb|EFM09906.1| methionyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] Length = 662 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 223/522 (42%), Positives = 324/522 (62%), Gaps = 21/522 (4%) Query: 1 MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M E K YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 1 MSESNKSFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDVRYLTGTDEHGQKIE 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 + AQ +G T FVD+ +++ LDISYDD+IRTTE RH ++ K+ ++GDI Sbjct: 61 RKAQESGKTPLQFVDEIVLGIKELWKKLDISYDDYIRTTEDRHKRVVERIFTKLVEQGDI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 YKG Y GWY E+++ + ++ DG + PV+ ++EE YFF LS Y D+LL + Sbjct: 121 YKGEYEGWYCTPCESFFPERQL---NDGNCPDCGR-PVELVKEESYFFSLSKYADRLLQH 176 Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 +E +PEFI P R+NE+I+ F+K GL+D ++SR TFDWGIK+P+DP++++YVWIDAL NY Sbjct: 177 FEENPEFIQPESRKNEMINNFIKPGLEDFAVSRTTFDWGIKVPNDPKHVVYVWIDALFNY 236 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 ++ GY + DG KFWPAD+H++GK+I+RFH IYW + L++ +LPLPKK+F+HG+ L Sbjct: 237 ISALGYDTSEDGLYRKFWPADVHLVGKEIVRFHTIYWTSMLMALDLPLPKKIFAHGWWLT 296 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K K+SKS G VIDP+++I+ G+D LRYFL+RE+ G DG + + +R N DLAN + Sbjct: 297 KEGKMSKSKGTVIDPVKLIDRYGLDVLRYFLLREVPFGSDGAFTPESFVERTNFDLANDL 356 Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 GNL++R+V+MI K +DG IP G T D + ++ I M+ AL + Sbjct: 357 GNLLNRTVAMIDKYFDGAIPAYTGDVTAFDVLLRQQAVESIEAIEAAMEKMEFSVALTAL 416 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 LVS ++Y D +PW L K RA ++ +Y E +R ++I+LQ F+ ++ Sbjct: 417 WQLVSRTNKYIDETQPWVLAKDESKRAELASSMYHLAESLRIVSIVLQPFLTNAPRAMWA 476 Query: 476 ILFVA-------DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 L + D + F +L PG +P+F R Sbjct: 477 QLGIEAGELTTWDSAKSFGTL-----PGGTRVSKAEPMFMRL 513 >gi|307286738|ref|ZP_07566824.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|306502216|gb|EFM71500.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|315165210|gb|EFU09227.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1302] Length = 677 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 215/521 (41%), Positives = 322/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++E YI+T I YP+ + HIG++Y I D +AR+ RL G DV + TG DEHGQKI K Sbjct: 9 MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 68 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A VT K +VD+ + + + + LDISYD FIRTT+ H + ++ ++ +GDIY Sbjct: 69 KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVKQGDIY 128 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE ++ + EVY+ +G + + V+ ++EE YFFR+S Y D Sbjct: 129 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 188 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YYE HPEFI P R+NE+++ F+K GL+DL++SR TF WGI + +DP++++YVWID Sbjct: 189 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 248 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY D K+WPA++ ++GK+I+RFH IYWP L++ +LPLPKKVF H Sbjct: 249 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 308 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P ++E G+DALRY+L+R I G DG + + R+N D Sbjct: 309 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 368 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG +P T D + + + V+ + E M+ + Sbjct: 369 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 428 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470 A+A++ +LVS ++Y D PW L K R +V+ E +R +AILLQ + + Sbjct: 429 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 488 Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 KIF+ L + E +++ + PIFPR Sbjct: 489 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 529 >gi|302873184|ref|YP_003841817.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|307688651|ref|ZP_07631097.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|302576041|gb|ADL50053.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B] Length = 643 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 211/513 (41%), Positives = 326/513 (63%), Gaps = 8/513 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + YI+T I YP+A+ HIG+ Y + AD LAR+ RL G DV+F TGTDEHGQKI + Sbjct: 1 MSNEKTYYITTPIYYPSAKLHIGNTYTTVAADALARYKRLTGYDVMFLTGTDEHGQKIQR 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GVT K +VD+ +D+ +++ISYD FIRTT+ H T + ++K++ D+GDIY Sbjct: 61 IAEEKGVTPKDYVDEIVAGIQDLWKLMNISYDKFIRTTDDYHKKTVQKIFKQLYDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y GWY E+++ D + DG+ + PV+ +EE YFF++S Y D+L+ Y Sbjct: 121 KGAYEGWYCTPCESFWTDTQ---AVDGKCPDCGR-PVETAKEEAYFFKMSKYADRLIEYI 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 E+HPEFI P R+NE+++ F++ GL+DL +SR TF WGI + DP +++YVW+DAL+NY+ Sbjct: 177 ETHPEFIQPESRKNEMLNNFLRPGLQDLCISRTTFTWGIPVEFDPDHVVYVWMDALSNYI 236 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 + G+ + D K+WP D+H++GKDI+RFH IYWP FL++ LPK+VF HG++L Sbjct: 237 SALGFDSDNDQLYKKYWPCDVHLVGKDIIRFHTIYWPIFLMALGQELPKQVFGHGWLLVD 296 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKS GNV+DP+ ++ G DA+RY+L+ EI G DG ++ + K+VN+DLAN +G Sbjct: 297 GGKMSKSKGNVVDPVVLVNHFGTDAVRYYLLHEIPFGSDGNFNSEIFIKKVNSDLANDLG 356 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL+SR+ +M++K +DG+I P + D ++++ + +++ + + +AL ++ + Sbjct: 357 NLLSRTTAMVIKYFDGVIQPPTDKEDIDNELINIALDMPKKVEAAINELNLPQALDEIWT 416 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L+ ++Y D PW L K +A TVLY +E +R ++ + +F+P+ KI + L Sbjct: 417 LIRRANKYIDETTPWILAKDEDKKARLGTVLYNLIEALRFASVAVSSFLPETGTKIQEQL 476 Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V S + G L K D IFPR Sbjct: 477 KVDVATWDSISAFDGTQAGVTLEKG-DVIFPRI 508 >gi|225850511|ref|YP_002730745.1| methionyl-tRNA synthetase [Persephonella marina EX-H1] gi|225646396|gb|ACO04582.1| methionyl-tRNA synthetase [Persephonella marina EX-H1] Length = 624 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 219/509 (43%), Positives = 312/509 (61%), Gaps = 12/509 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+K Y++T I Y N PH+GHAY + ADVLAR+ R G+ F TGTDEHG KI K+A+ Sbjct: 3 RKKFYVTTPIYYVNDLPHLGHAYTTVAADVLARYFRQKGVKTFFLTGTDEHGLKIQKSAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ K D + F+++ +VL+ISYD FIRTT+ H + +++K D GDIY Sbjct: 63 EKGISPKELADITHKKFKELWEVLNISYDRFIRTTDPDHIKAVQYIFQKCYDNGDIYLSE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y WY + E + + E+ D Y H P + ++EE YFFRLS YQDKLL Y+ Sbjct: 123 YESWYCVGCEEFKTETEI---KDYDYKCPVHLKPCEKVKEESYFFRLSKYQDKLLKLYQE 179 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLT 240 P+FI+P R+NEV+SFVK GLKDLS+SRK WGI +P DP + +YVW DALTNYLT Sbjct: 180 KPDFIMPEYRKNEVVSFVKQGLKDLSVSRKRERVKWGIPVPFDPDHTIYVWFDALTNYLT 239 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY +P+ +FWPAD+H++GKDILRFHA+YWPAFL+SA + +P+ VF+HG+ +G Sbjct: 240 AVGYPPSPN----EFWPADVHIVGKDILRFHAVYWPAFLMSAGIEVPEMVFAHGWWTVEG 295 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKSLGNV+DP E ++ GVD LRYFL+RE+ G DG + K + R+N+DLAN +GN Sbjct: 296 HKMSKSLGNVVDPFEASQKYGVDQLRYFLMREVPFGLDGDFSKKAVIGRINSDLANDLGN 355 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SRS+SMI K G +P G ++ +E + ++ +++ ++AL V Sbjct: 356 LFSRSLSMINKFNKGFVPGAGDISQLEEEYKELYRYTVENFDKHISKLEFNKALEIVWEF 415 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 + +++Y +PW+LKK +T LY + + + LL+ F+P + L V Sbjct: 416 IDFLNKYIVKTEPWKLKKEGNSYLNTALYTVADGLLLITYLLKPFMPGKMETALEYLGV- 474 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 +N + G + K P+FPR Sbjct: 475 -DNLPSEMEPYSFPEGVKVKKKIKPLFPR 502 >gi|51894387|ref|YP_077078.1| methionyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] gi|51858076|dbj|BAD42234.1| methionyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] Length = 651 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 226/516 (43%), Positives = 318/516 (61%), Gaps = 19/516 (3%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + YI+T I YP+++ HIGH+Y + AD LAR+HR G + F TGTDEHGQKI +AA Sbjct: 3 RFYITTPIYYPSSKLHIGHSYTTVAADALARYHRRLGHETYFLTGTDEHGQKIERAALAE 62 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T FVD+ +++ L ISYDDFIRTTE+RH + ++K++ D+GDIYK Y Sbjct: 63 GKTPIQFVDEIVAGIKELWAALHISYDDFIRTTEERHKKVVQKIFKQLYDQGDIYKSSYE 122 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY E ++ + ++ +G PV+W ++E YFFRLS Y D+LL Y E + Sbjct: 123 GWYCTPCETFWIESKL---KEGNLCPDCGRPVEWTKDESYFFRLSKYADRLLRYIE-ETD 178 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P R+NE+ISF+ GL+DL +SR T WGI +P D + +YVWIDAL+NY++ G+ Sbjct: 179 FIQPASRKNEMISFINQGLEDLCVSRSTVRWGIPVPFDEKQTIYVWIDALSNYISALGWG 238 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL--HKGEKI 303 D KFWPAD+H++GK+I+RFH I WP L++ LPLPKKVF HG++L + EK+ Sbjct: 239 TENDELYRKFWPADVHLVGKEIVRFHTIIWPCILMALGLPLPKKVFGHGWLLFGTQAEKM 298 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP +I+ GVDA+RY+L+RE+ G DG Y ++ R N DLAN +GNL+S Sbjct: 299 SKSKGNVVDPFVLIDRYGVDAVRYYLLREVPFGADGTYTEEAFILRTNNDLANDLGNLLS 358 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R+ MI K DG +P P SD+ ILS + ++VL+E +E M I AL + LV Sbjct: 359 RTTQMINKFSDGRVPEPDP--ASDDRILSDLAAQVLREFQEAMDRLEISSALVALWKLVD 416 Query: 423 EVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 ++Y D Q PW L + +P RA TVLY E +R L + L F+ + +I+D L + Sbjct: 417 RANKYIDEQAPWALAR-DPGRAGQLRTVLYNLAETLRLLGVALTPFLVQTPERIWDQLGL 475 Query: 480 ADENRCFQSLDQR-----LKPGFMLHKTFDPIFPRF 510 ++ LKPG ++ + P+FPR Sbjct: 476 EPAQVRTLPWEEAVAWGGLKPGTVIRRG-SPLFPRI 510 >gi|323140336|ref|ZP_08075268.1| methionine--tRNA ligase [Phascolarctobacterium sp. YIT 12067] gi|322415194|gb|EFY05981.1| methionine--tRNA ligase [Phascolarctobacterium sp. YIT 12067] Length = 653 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 220/478 (46%), Positives = 306/478 (64%), Gaps = 12/478 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I YP+ HIGHAY IAD LARFHRL G DV F TG+DEHG KI + A+ GV Sbjct: 7 YITTPIYYPSDNLHIGHAYCTTIADSLARFHRLKGEDVFFLTGSDEHGLKIQRKAKEKGV 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T +VD NF+ + L+IS +DFIRT+++RHH + +KI ++GDIYK Y G Sbjct: 67 TPIQYVDAIIANFKLLWKELNISNNDFIRTSQERHHKVVQDALQKIYEQGDIYKKNYKGL 126 Query: 128 YSLRDEAYYND---DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 Y + E+Y+ + DE + D H PV+ MEEE YFF++S YQD L + E HP Sbjct: 127 YCVPCESYWLERQLDENHCCPDC------HRPVEEMEEESYFFKMSKYQDWWLQFIEEHP 180 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RRNE+I+FVK GL+DL ++R TFDWGI +P D ++++YVW DAL NYLT Y Sbjct: 181 DFIQPASRRNEMINFVKQGLEDLCITRTTFDWGIPVPFDKKHVVYVWFDALLNYLTGIKY 240 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D K+WPA LH++GK+I+RFH I WP L + L +P++V+ HG+++ G+K+S Sbjct: 241 -GTDDAFFHKYWPASLHLVGKEIVRFHTIIWPIMLHAMGLEMPQEVYGHGWLVVDGDKMS 299 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNVIDP+ +I+E G DA+RYFL+REI G DG + +D L RVNADLAN +GNL+ R Sbjct: 300 KSKGNVIDPLGLIDEFGADAIRYFLLREINLGSDGNFSRDALITRVNADLANDLGNLLHR 359 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 +VSMI K + G++ GA D+ + ++ + + M N I+ A+ V +L+S Sbjct: 360 TVSMIEKYHGGIVADTGASEPIDDELKALVKETVANYVKAMDNMEINTAIKGVWALISRA 419 Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++Y D PW L K DR TV+Y E +R +AIL+ ++P + KI+ L +A Sbjct: 420 NKYIDETAPWILAKDEAKADRLKTVMYNLAETLRIVAILISPYIPTTSPKIYTQLGLA 477 >gi|330686067|gb|EGG97689.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU121] Length = 656 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 218/522 (41%), Positives = 330/522 (63%), Gaps = 17/522 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + D L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTELEYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVY-------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y GWYS+ DE YY + ++ K G+ ++ H V+ ++EE YFF + Y D+L Sbjct: 123 YEGWYSVPDETYYTESQLVEPIYENGKIVGGKSPDSGHE-VELVKEESYFFNIKKYTDRL 181 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 L +Y+ +P+FI P R+NE+I+ F+K GL+DL++SR +F+WG+ +P +P++++YVWIDAL Sbjct: 182 LEFYDQNPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFNWGVSVPSNPKHVVYVWIDAL 241 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+HG+ Sbjct: 242 VNYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N DLA Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNLV+R++SMI K + G +P G E DE + ++ ++E ENM++ AL Sbjct: 362 NDLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEAMALDTVKEFHENMESLQFSVAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + V +S ++Y D PW L K + D V+ VE IR +LL+ F+ + Sbjct: 422 STVWKFISRTNKYIDETTPWVLAKDESQKDMLGNVMAHLVENIRFATVLLRPFITHAPKE 481 Query: 473 IFDILFVAD-ENRCFQSLDQ---RLKPGFMLHKTFDPIFPRF 510 IF L + + E F SL+ +P ++ K PIFPR Sbjct: 482 IFKQLNINNPELMEFSSLETYGALTEPITVIAKP-TPIFPRL 522 >gi|23097501|ref|NP_690967.1| methionyl-tRNA synthetase [Oceanobacillus iheyensis HTE831] gi|25009346|sp|P59079|SYM_OCEIH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|22775724|dbj|BAC12002.1| methionine-tRNA ligase [Oceanobacillus iheyensis HTE831] Length = 673 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 216/527 (40%), Positives = 326/527 (61%), Gaps = 21/527 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M YI+T I YP+ + HIG+AY I DV+AR+ R+ G DV + TG+DEHGQKI + Sbjct: 1 MARENAFYITTPIYYPSGKLHIGNAYTTIACDVMARYKRMRGFDVFYLTGSDEHGQKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ ++ K +VD + + + + L+IS D FIRTTE++H ++++ ++GDIY Sbjct: 61 KAKEMNISPKAYVDDMAEGMKKLWNTLEISNDKFIRTTEEQHKKVVADIFERFLEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQ 173 Y GWYS+ DE +Y + ++V + DG + +PV+ ++EE YFFR+S Y Sbjct: 121 LDEYEGWYSVPDETFYTETQLEDVERDDDGNVIGGKSPDSGHPVELIKEESYFFRMSKYA 180 Query: 174 DKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 D+LL +YE +PEFI P R+NE+I+ F+K GL+DL++SR TF WG+++P +P++++YVWI Sbjct: 181 DRLLKFYEDNPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFSWGVQVPSNPKHVVYVWI 240 Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 DALTNY+T GY KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+ Sbjct: 241 DALTNYITALGYGSEDTSLYDKFWPADVHMVGKEIVRFHTIYWPIMLMALDLPLPKKVFA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG++L K K+SKS GNV+ P ++E G+DALRY+L+RE+A G DG + + RVN Sbjct: 301 HGWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMREVAFGSDGVFTPEDFISRVNY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN +GNL++R+V+MI K +DG +P G T D + + + ++E ++M+ Sbjct: 361 DLANDLGNLLNRTVAMINKYFDGKVPEFKGEVTSFDGELQTTANNAVKEYEKHMEGMQFS 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469 AL QV L+S ++Y D +PW + K R ++V+ E + A++LQ F+ Sbjct: 421 DALKQVWILISRANKYIDETEPWIVAKDEGRRNELASVMVHLAESLHAAALMLQPFLTHA 480 Query: 470 ANKIFDILFVADENRCFQSLD------QRLKPGFMLHKTFDPIFPRF 510 KI + L + +E LD + K PIFPR Sbjct: 481 PKKIAEQLGLGEE----YGLDWGTIGFGNFPENTTVVKKGTPIFPRL 523 >gi|317050747|ref|YP_004111863.1| methionyl-tRNA synthetase [Desulfurispirillum indicum S5] gi|316945831|gb|ADU65307.1| methionyl-tRNA synthetase [Desulfurispirillum indicum S5] Length = 629 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 203/473 (42%), Positives = 305/473 (64%), Gaps = 9/473 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I Y N PHIGHAY + DV ARF RL G DV+F TGTDEHG KI +AA+ G Sbjct: 6 YVTTPIYYVNDVPHIGHAYTTVACDVAARFQRLMGRDVMFLTGTDEHGMKIEQAARKNGE 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T ++ + F+++ LDIS+DDFIRTTEKRH L++++ ++GDIY G Y GW Sbjct: 66 TPIELANRVVKRFQELWTTLDISHDDFIRTTEKRHEMGVHKLFRQLREQGDIYLGEYEGW 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQ--HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 Y E+++ + +V G+ N V ++E+ YFFR+S Y + LL + +++P Sbjct: 126 YCTPCESFWTETQV-----GEAINCPDCGRSVDKLKEKSYFFRMSKYAEPLLEHIKTNPG 180 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RRNE+I F++SGL+DLS+SR TFDWGIK+PDDP++++YVW DAL+NY+T GY Sbjct: 181 FIQPESRRNEIIRFIESGLRDLSISRTTFDWGIKVPDDPEHVIYVWFDALSNYMTAIGYG 240 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + + + ++WPA HV+GKDILRFH +YWP FL++A + LP++VF+HG+ +G+K+SK Sbjct: 241 SDEEKWQ-RYWPASAHVVGKDILRFHTVYWPTFLMAAGIELPRQVFAHGWWTVEGKKMSK 299 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SL N +DP ++E+ GVD +RYFL+RE+ G DG + L R+N+DLAN +GNL+SR+ Sbjct: 300 SLMNAVDPNILVEKFGVDPIRYFLLREVPFGLDGDFSMQALVGRINSDLANDLGNLLSRT 359 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 M+ + +DG+ P G E +++++ ++ R +M+ +RAL ++ +V ++ Sbjct: 360 SGMMFRYFDGLTPASGPLQEREQALIQATGERMEGYRADMEVMAFNRALMKIWEIVGSLN 419 Query: 426 RYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +Y +PW L K T L T E +R +A + F+P + KI L Sbjct: 420 KYIVETEPWALHKAGKTTELQTSLATTAEGLRVIANAVYPFMPSSSRKILQAL 472 >gi|312142731|ref|YP_003994177.1| methionyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] gi|311903382|gb|ADQ13823.1| methionyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] Length = 652 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 207/472 (43%), Positives = 319/472 (67%), Gaps = 3/472 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ Y++T I YP+ + HIGHAY + AD +AR+ ++ G D +F TG+DEHGQKI + A Sbjct: 3 KDTYYVTTPIYYPSDKLHIGHAYTTVAADTIARYKKMHGYDTMFLTGSDEHGQKIERKAA 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G TK +VD+ +F+++ LDI YD FIRTTE+RH + ++KK+ DKGDIYKG Sbjct: 63 AEGKDTKEYVDEIVASFKELWKKLDIDYDYFIRTTEERHEKVVQKIFKKLYDKGDIYKGK 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+++++ ++ + + H PV+W+EE+ YFF++S Y D+LL + + H Sbjct: 123 YEGWYCTPCESFWSERQLEEEQGEKVCPDCHRPVEWVEEQSYFFKMSKYADRLLEHIKEH 182 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNE+ISF+++GL DLS+SR TFDWGI +P D +++YVWIDAL+NY+T G Sbjct: 183 PQFIEPESRRNEMISFIENGLDDLSVSRTTFDWGIPVPIDEDHVIYVWIDALSNYITAIG 242 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y +P+ + +WPADLH++GKDILRFH + WP L++ +L LPK+VF HG++L K K+ Sbjct: 243 YQSDPENFE-HYWPADLHLVGKDILRFHTVIWPIILMALDLELPKQVFGHGWLLSKSGKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP+ ++ + G DA+RY+L+RE+A G DG Y + L +R+N+DLAN +GNL++ Sbjct: 302 SKSKGNVVDPVVLVNDFGKDAIRYYLLREVAFGTDGTYSTEALIQRINSDLANDLGNLLN 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+VSM+ + +D IP G D+ ++ + +++ E+ + M+ AL ++ LV Sbjct: 362 RTVSMVEQYFDSNIPVVGEKEAVDQELIDLTAKIKVEVEKEMEELKYTVALERIWDLVRR 421 Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++Y D PW L + + R TVLY +E +R +A++L+ F+ + KI Sbjct: 422 TNKYIDQTTPWILGRDESKKSRLGTVLYNLLESLRIIAVMLKPFLTETPLKI 473 >gi|239637476|ref|ZP_04678450.1| methionyl-tRNA synthetase [Staphylococcus warneri L37603] gi|239596921|gb|EEQ79444.1| methionyl-tRNA synthetase [Staphylococcus warneri L37603] Length = 656 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 219/522 (41%), Positives = 330/522 (63%), Gaps = 17/522 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ HIGHAY + DV+AR+ R+ G DV + TGTDEHGQKI + AQ Sbjct: 3 KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T ++D+ + + D L+IS DDFIRTTE+RH +++++ +GDIY G Sbjct: 63 KAGKTELEYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDE----VYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y GWYS+ DE YY + + VY+ G+ ++ H V+ ++EE YFF + Y D+L Sbjct: 123 YEGWYSVPDETYYTESQLVEPVYENGKIVGGKSPDSGHE-VELVKEESYFFNIKKYTDRL 181 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 L +Y+ +P+FI P R+NE+I+ F+K GL+DL++SR +F+WG+ +P +P++++YVWIDAL Sbjct: 182 LEFYDQNPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFNWGVSVPSNPKHVVYVWIDAL 241 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+++ GYL + + K+WPAD+H++ K+I+RFH+I WP L++ +LPLPKKVF+HG+ Sbjct: 242 VNYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 IL K K+SKS GNV+DP +I+ G+DA RY+L+RE+ G DG + + +R N DLA Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDLYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNLV+R++SMI K + G +P G E DE + ++ ++E ENM++ AL Sbjct: 362 NDLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEAMALETVKEFHENMESLQFSVAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + V +S ++Y D PW L K + D V+ VE IR +LL+ F+ + Sbjct: 422 STVWKFISRTNKYIDETTPWVLAKDESQKDMLGNVMAHLVENIRFATVLLRPFITHAPKE 481 Query: 473 IFDILFVAD-ENRCFQSL---DQRLKPGFMLHKTFDPIFPRF 510 IF L + + E F SL +P ++ K PIFPR Sbjct: 482 IFKQLNINNPELMEFSSLATYGSLTEPITVITKP-TPIFPRL 522 >gi|241888882|ref|ZP_04776188.1| methionyl-tRNA synthetase [Gemella haemolysans ATCC 10379] gi|241864558|gb|EER68934.1| methionyl-tRNA synthetase [Gemella haemolysans ATCC 10379] Length = 666 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 214/526 (40%), Positives = 324/526 (61%), Gaps = 25/526 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ Y++T I YP+ HIGHAY + D L R+ +L G D F TGTDEHGQKI + AQ Sbjct: 3 KKTFYVTTPIYYPSGNLHIGHAYTTVACDALTRYKKLSGYDTYFLTGTDEHGQKIQQKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ + +VD+ ++ + + + +DI+Y FIRTT+ H ++ K+ +KGDIY G Sbjct: 63 EKGISEQAYVDEMIKDIKKLWEAMDINYSKFIRTTDDYHETAVAEIFDKLVEKGDIYLGE 122 Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWYS+ DE Y+ + EV++ +G N V+ + EE YFF++S Y D+L+ Sbjct: 123 YKGWYSISDEEYFTETQLQEVFRDEEGNMIGGIAPSGNEVKLVSEECYFFKMSKYADRLV 182 Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 YY+ HPEFILP R+NE+++ F+K GL+DL+++R TFDWG+K+ +P++++YVWIDAL Sbjct: 183 KYYDEHPEFILPESRKNEMLNNFIKPGLEDLAVTRTTFDWGVKVKSNPKHVVYVWIDALV 242 Query: 237 NYLTTTGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 NY+T GY GS+ K+WPAD+ V+GK+I+RFH IYWP L++ +LPLPKK+F+H Sbjct: 243 NYITALGYATG--GSEELFNKYWPADVQVVGKEIVRFHVIYWPILLMALDLPLPKKIFAH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+DP +IE G+D+ RY+L+RE+ G+DG + + R+N+D Sbjct: 301 GWLLMKDGKMSKSKGNVVDPYMLIERYGLDSARYYLLREVPFGQDGIFTPESFIDRINSD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 L+N +GNL++R++SMI K G+IP TE D ++++ V+ E E M+N + Sbjct: 361 LSNDLGNLLNRTISMINKYCGGVIPKFVEPTTEFDRELIALSKEVIAEYEEYMENMQFSK 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL V +S ++Y D PW L K N V+ E +R IL+ + K Sbjct: 421 ALESVWKFISRTNKYIDQTTPWILAKDEENQPELDKVMNYLAESLRIATILIAPALTKAP 480 Query: 471 NKIF------DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 +I + L V + + F D +K ++ K PIFPRF Sbjct: 481 TEIAKQLGIREDLLVFESAKTFGVFDGTVK---VVEKP-TPIFPRF 522 >gi|225849056|ref|YP_002729220.1| methionyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643562|gb|ACN98612.1| methionyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] Length = 626 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 224/509 (44%), Positives = 317/509 (62%), Gaps = 13/509 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K YI+T I Y N PH+GHAY I DV+AR++R G+D F TGTDEHGQKI KAA+ Sbjct: 2 QNKFYITTPIYYVNDVPHLGHAYTTIACDVMARYYRQKGVDTFFLTGTDEHGQKIQKAAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ K D+ +F+++ + L+ISYD FIRTT+ H + +++K + GDIY Sbjct: 62 EKGIHPKELADKTHLSFKNLWEKLNISYDRFIRTTDPDHIKAVQHIFQKCYENGDIYLAE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y +Y + E + + E+ D Y H P + ++EE YFFRLS Y +KLL +YE Sbjct: 122 YESYYCVGCEEFKTETEI---KDYDYKCPIHLKPCEKVKEESYFFRLSKYTEKLLEFYEK 178 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLT 240 +P+FI P RRNEV+SFVK GLKDLS+SRK WGI +P D + +YVW DALTNYLT Sbjct: 179 NPDFIQPDFRRNEVVSFVKQGLKDLSVSRKKDRVWWGIPVPFDESHTIYVWFDALTNYLT 238 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY DN + KFWPAD+HV+GKDILRFHA+YWPAFL+SA + +PKKVF+HG+ +G Sbjct: 239 AVGYPDNLN----KFWPADVHVVGKDILRFHAVYWPAFLMSAGIEIPKKVFAHGWWTVEG 294 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKSLGNV+DP + +E GVD LRYFL+RE+ G DG + + R+N+DLAN +GN Sbjct: 295 HKMSKSLGNVVDPFKAADEYGVDQLRYFLLREVPFGLDGDFSNQAVVNRINSDLANDLGN 354 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 LVSRS++MI K +G I T+ ++ ++ + ++ + + N R+L +V Sbjct: 355 LVSRSLTMIQKFQEGNILPYTQLTDLEDEYKNIYEKTIENFDKYLSNLEFSRSLEEVWQF 414 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 + +++Y +PW+L K N + TVLYV + I + +L+ F+P KI + L + Sbjct: 415 IDWLNKYIVKVEPWKLNKENKEYLKTVLYVLADGIYAILWMLKPFMP---TKIQEALNML 471 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 N S+ P + + P+FPR Sbjct: 472 GYNEVKNSIQPFSLPTNIKIQEVKPLFPR 500 >gi|326804011|ref|YP_004321829.1| methionine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a] gi|326650118|gb|AEA00301.1| methionine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a] Length = 666 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 215/518 (41%), Positives = 326/518 (62%), Gaps = 11/518 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y++T I YP+ Q HIG++Y I AD +AR+ RL G +V F TG DEHG KI + A+ Sbjct: 5 KEPFYVTTPIYYPSGQLHIGNSYSTIAADTIARYKRLMGHEVFFLTGADEHGLKIQQKAE 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ K +VD+ + + + LDIS D FIRTT+ H + +++++ D+GDIY G Sbjct: 65 EEGISPKAYVDRMAEGMQKLWKSLDISNDKFIRTTDDYHVKAVQDIFEQLLDQGDIYLGE 124 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDKLL 177 Y GWYS+ DE Y+ + EVY+ DG+ + + V+ ++EE YFF++S Y D+LL Sbjct: 125 YEGWYSVSDEEYFTETQLAEVYRDDDGKVIGGKAPSGHEVELVKEESYFFKMSKYADRLL 184 Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 YYE HP+FI P R+ E+I+ F+K GL+DL+++R +F WGI + +P++++YVWIDAL Sbjct: 185 QYYEDHPDFIQPESRKKEMINNFIKPGLEDLAVTRTSFSWGIPVRSNPKHVIYVWIDALA 244 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NY+T GY D KFWPA++H++GK+I+RFH IYWP L++ +LPLPK+VF HG++ Sbjct: 245 NYITALGYGSEDDSRYQKFWPANVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGWL 304 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L + K+SKS GNV+ P +I+ G+DALRY+L+RE+ G DG + D R+N DLAN Sbjct: 305 LMQDGKMSKSKGNVVYPEMLIDRYGLDALRYYLMREVQFGSDGVFTPDNFVNRINFDLAN 364 Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 +GNL++R++SM+ K G PG T+ D + +V ++ NM N AL Sbjct: 365 DLGNLLNRTISMLNKYQAGRAGAYPGQVTDYDADLEAVIEDNVRAYFGNMDNFHFSLALD 424 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++S ++Y D PW L K + ++A +VLY V+ +R +AIL+Q + + I Sbjct: 425 NTWKIISRANKYIDETMPWVLAKDDSNQAELQSVLYHLVDALRIIAILIQPVMTQTPKLI 484 Query: 474 FDILFVADENRCFQSLDQRLKP-GFMLHKTFDPIFPRF 510 F+ L ++D + F SL+ L P + +PIFPR Sbjct: 485 FEQLGISDSDHSFASLEIGLYPAAAQVIAKGEPIFPRL 522 >gi|182420024|ref|ZP_02951258.1| methionyl-tRNA synthetase [Clostridium butyricum 5521] gi|237669576|ref|ZP_04529556.1| methionine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376061|gb|EDT73648.1| methionyl-tRNA synthetase [Clostridium butyricum 5521] gi|237655020|gb|EEP52580.1| methionine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 647 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 205/473 (43%), Positives = 305/473 (64%), Gaps = 7/473 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG+ Y + AD +ARF RL G DV+F TGTDEHGQKI + A+ Sbjct: 6 KKPFYITTPIYYPSTKLHIGNTYTTVAADAIARFKRLTGYDVMFLTGTDEHGQKIQRIAE 65 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T VD+ +D+ +++ISYD FIRTT+ H + ++KK+ D+GDIYK Sbjct: 66 EKGITPIEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQDIFKKLYDQGDIYKSS 125 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+++ D ++ G PV+ +EE YFF++S Y D+L+ Y E H Sbjct: 126 YEGWYCTPCESFWTDTQLVNGNCPDC----GRPVEKSKEEAYFFKMSKYADRLIKYIEEH 181 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P FI P R+NE+++ F++ GL+DL +SR +FDWG+ + D ++++YVWIDAL+NY+T Sbjct: 182 PHFIQPESRKNEMLNNFLRPGLQDLCVSRTSFDWGVPVTFDEKHVVYVWIDALSNYITAL 241 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY + KFWPAD+H+IGKDILRFH IYWP L++ +LPLPK+VF HG++L G K Sbjct: 242 GYGQDNKELYDKFWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 301 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ ++ E GVD +RY+L+REI G DG ++ + K++N+DL N +GNL+ Sbjct: 302 MSKSKGNVVDPVVLVNEFGVDPVRYYLLREIPFGADGLFNNEIFIKKINSDLCNDLGNLL 361 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+V+MI K +DG IP E D+ ++++ ++ E + + AL V L+ Sbjct: 362 SRTVAMIEKYFDGEIPAQAEKGEFDDELINLALSTPAKVEEAVTELNLPLALEHVFELIG 421 Query: 423 EVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++Y D PW L K +A TVLY +E +R ++++ AF+P A KI Sbjct: 422 RANKYIDETTPWILAKDEDKKARLGTVLYNLIESLRFASVMISAFLPDTAKKI 474 >gi|310657778|ref|YP_003935499.1| methionyl-tRNA synthetase [Clostridium sticklandii DSM 519] gi|308824556|emb|CBH20594.1| methionyl-tRNA synthetase [Clostridium sticklandii] Length = 651 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 212/509 (41%), Positives = 314/509 (61%), Gaps = 9/509 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I YP+ + HIGH Y + AD +AR+ R G DV F TGTDEHG+KI K A Sbjct: 6 FYVTTPIYYPSGRLHIGHTYTTVAADAIARYKRFTGFDVRFLTGTDEHGEKIQKTAAEKK 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + K ++D + + + + ++ISYDDFIRTT++RH + +++K+ DKGDIY G Y G Sbjct: 66 MMPKDYLDGMIEDIKKLWETMEISYDDFIRTTDERHEKAVQKIFQKLYDKGDIYLGEYEG 125 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WY + E+ + D +V G + + + VQ +E YFF+LS YQ L+ YY SHP+F Sbjct: 126 WYCIPCESLWTDTQV--GEEHLCPDCKRE-VQKKKESSYFFKLSKYQQPLVDYYNSHPDF 182 Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 P R+NE+++ F+ +GL DLS+SR TFDWGIK+P D ++++YVWIDAL NY+T GYL Sbjct: 183 CFPESRKNEMLNNFINAGLDDLSVSRTTFDWGIKVPFDDKHVIYVWIDALCNYITALGYL 242 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + K+WPA++ ++GK+I+RFH I WPA L++ +LPLP KV+ HG+IL +K+SK Sbjct: 243 SEDESLMEKYWPANMQIVGKEIVRFHTIIWPALLMALDLPLPDKVYGHGWILFSEDKMSK 302 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S GN++ P +IE G+DAL+YFL++E G+DG Y R+N+DL N +GNL+SR+ Sbjct: 303 SKGNIVYPEPIIERYGIDALKYFLLKEFTFGQDGNYTNRNFLTRINSDLVNDLGNLLSRT 362 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 VSMI K D ++P P F + V S + ++ + M + AL ++ +V + Sbjct: 363 VSMIEKYNDSIVPEPKVFDSVHAELKKVASSMPAKVDDAMNRMQFNEALEEIWKVVRRSN 422 Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +Y D PW L K T D TVLY E +R + +++ + A KIF+ L +E Sbjct: 423 KYVDETMPWVLAKDETKKDELDTVLYNLAEALRLVTVMISPLLHITAKKIFEQLSAGEEI 482 Query: 484 RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 R ++S LKPG + K + +FPR Sbjct: 483 RTYESALSFGGLKPGTKVAKG-EILFPRL 510 >gi|28210009|ref|NP_780953.1| methionyl-tRNA synthetase [Clostridium tetani E88] gi|38258346|sp|Q899D9|SYM_CLOTE RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|28202444|gb|AAO34890.1| methionyl-tRNA synthetase [Clostridium tetani E88] Length = 641 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 202/479 (42%), Positives = 316/479 (65%), Gaps = 7/479 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+A+ HIG+ Y + AD LARF RL G DVLF TGTDEHGQKI + A+ Sbjct: 3 KKTFYITTPIYYPSAKLHIGNTYTTVAADALARFKRLTGHDVLFLTGTDEHGQKIQRVAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ K ++D + +++ ++ISYD FIRTT+ H ++ + ++KK+ ++GDIYKG Sbjct: 63 EKGLKPKEYLDNMVDSIKELWKSMNISYDKFIRTTDDYHIESVQKIFKKLYEQGDIYKGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+++ + ++ D PV+ +EE YFF++S Y D+L+ Y E + Sbjct: 123 YEGWYCTPCESFWTESQL----DDHNCPDCGRPVEKTKEEAYFFKMSKYADRLIKYIEEN 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P FI P R+NE+++ F+K GL+DL +SR +FDWGI + D ++++YVWIDAL+NY+T Sbjct: 179 PHFIQPESRKNEMLNNFLKPGLQDLCISRTSFDWGIPVSFDNKHVIYVWIDALSNYITAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY + KFWPA++H++GKDILRFH IYWP L++ + LPK+VF HG++L G K Sbjct: 239 GYNSDNQELLEKFWPANVHLVGKDILRFHTIYWPIMLMALGIELPKQVFGHGWLLVDGGK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ +++ G D +RY+L+REI G DG ++ + K++N+DLAN +GNL+ Sbjct: 299 MSKSKGNVVDPVVLVDHFGEDTVRYYLLREIPFGSDGLFNNELFIKKINSDLANDLGNLL 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+V+M+ K ++G++P P A D+ ++++ +++ NM+ I L ++ +L+ Sbjct: 359 SRTVAMVQKYFNGIMPAPIAKEPIDDELINLALDTREKVENNMEKLKIPEVLDEIWTLIG 418 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 ++Y D PW L K DR TVLY E +R +++L+ AF+PK + +I + L V Sbjct: 419 RANKYIDETTPWILAKDEDKKDRLGTVLYNLSETLRIISVLISAFIPKTSERINEQLNV 477 >gi|118580084|ref|YP_901334.1| methionyl-tRNA synthetase [Pelobacter propionicus DSM 2379] gi|118502794|gb|ABK99276.1| methionyl-tRNA synthetase [Pelobacter propionicus DSM 2379] Length = 506 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 218/513 (42%), Positives = 322/513 (62%), Gaps = 16/513 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + Y++T I Y N PHIGHAY + ADVLAR+ RL G DV F TG+DEHGQK+ KAA Sbjct: 2 KPSFYVTTPIYYVNDVPHIGHAYTTVAADVLARYKRLMGYDVYFLTGSDEHGQKVEKAAT 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T D+ + ++ + + L IS +DFIRTT++RH L+ I ++GDIY G Sbjct: 62 TAGETPLELADRVVKRYQALWERLGISNNDFIRTTQERHKKGVSQLFSLIMERGDIYLGE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y WY E ++ + ++ + + PV+ ++EE YFFR+S YQ++LL++ E++ Sbjct: 122 YEDWYCTPCETFWPETQLIEDRCPDC----NRPVEKLKEESYFFRMSKYQEQLLAHIEAN 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P +RNE+ISFVK GL+DLS+SR TF WGI +P + ++I+YVW DALTNYLT G Sbjct: 178 PDFIQPKSKRNEIISFVKEGLRDLSISRTTFSWGIPVPGNDKHIVYVWFDALTNYLTALG 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D+ +FWPA++H+IGKDILRFH +YWP FL++A LPLP+KVF+HG+ +G+K+ Sbjct: 238 YPDS-TAEYGRFWPANVHLIGKDILRFHTVYWPTFLMAAGLPLPEKVFAHGWWTVEGQKM 296 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSL NV++P +I++ GVD +RYFL+RE+ G DG + L +R+N+DLAN +GNL+S Sbjct: 297 SKSLQNVVEPNMLIDKYGVDVVRYFLMREVPFGLDGDFSHTALIQRLNSDLANDLGNLLS 356 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS +M +K + G++P TE D S+ S ++ + + M +AL + ++S Sbjct: 357 RSTAMAVKYFGGILPAATELTEIDHSLQEKTSAMIAAVDKFMDELAFSKALQAIWEVISA 416 Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--- 478 ++Y D PW L K DR +TV+Y +E R +L AF+P K L Sbjct: 417 GNKYIDDCAPWVLAKDPAQKDRLATVMYCLLESQRIAHCILSAFLPATTAKALASLGWDG 476 Query: 479 -VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 ++ E+ + L + G + K + +FPR+ Sbjct: 477 EISRESLAWGGLQE----GTTITKA-EALFPRY 504 >gi|251796284|ref|YP_003011015.1| methionyl-tRNA synthetase [Paenibacillus sp. JDR-2] gi|247543910|gb|ACT00929.1| methionyl-tRNA synthetase [Paenibacillus sp. JDR-2] Length = 663 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 213/517 (41%), Positives = 325/517 (62%), Gaps = 15/517 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI + A Sbjct: 4 DKKTFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDVWYLTGTDEHGQKIERNA 63 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 ++ + + FVD +++ L+IS DDFIRTTE RH + ++ ++ + DIYKG Sbjct: 64 KDKNKSPQQFVDDIVVGIKELWSKLEISNDDFIRTTEPRHKEAVEKIFAQLLKQDDIYKG 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E+++ + ++ G PV+ ++EE YFFR+S Y D+LL +YE Sbjct: 124 EYEGWYCTPCESFFLERQLVNGNCPDC----GRPVELVKEESYFFRMSKYADRLLKHYEE 179 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +P+FI P R+NE+I+ F+K GL+DL++SR TFDWGIK+P DP++++YVWIDAL+NY+T Sbjct: 180 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALSNYITA 239 Query: 242 TGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 GY +GS +FWPAD+H++GK+I+RFH IYWP L++ LPLPKKVF+HG++L Sbjct: 240 LGY--GKEGSSDLYDRFWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFAHGWLLM 297 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K K+SKS GNV+DP+ +I+ G+DA+RY+L+RE+ G DG + + R+N DLAN + Sbjct: 298 KDGKMSKSKGNVVDPVTLIDRYGLDAVRYYLLREVPFGSDGTFTPENFVDRINFDLANDL 357 Query: 359 GNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 GNL++R+V+MI K +DG IP G T DES+ + ++++ +M+ AL+ + Sbjct: 358 GNLLNRTVAMIDKYFDGEIPAYGGNVTAFDESLQVLAVETVRQVESSMETMEFSVALSAI 417 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 VS ++Y D PW L K + ++V+Y E +R ++ILLQ ++ +++ Sbjct: 418 WQFVSRTNKYIDETSPWALAKDEAKKGELASVMYHLAESLRIISILLQPYLTHAPRELWR 477 Query: 476 ILFVADENRCFQSLDQRLK--PGFMLHKTFDPIFPRF 510 L + + +R PG P+FPR Sbjct: 478 QLGLEEGELTAWESTKRFGQLPGGTRVSKGAPVFPRL 514 >gi|260424613|ref|ZP_05732665.2| methionine--tRNA ligase [Dialister invisus DSM 15470] gi|260402545|gb|EEW96092.1| methionine--tRNA ligase [Dialister invisus DSM 15470] Length = 676 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 217/521 (41%), Positives = 331/521 (63%), Gaps = 18/521 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ K YI+T I YP+A+ HIGH Y IAD +ARF RLDG +V+F TG+DEHGQKI + Sbjct: 30 MTEKPKYYITTPIYYPSAKLHIGHTYCTSIADSMARFKRLDGYEVMFLTGSDEHGQKIEQ 89 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ +GVT +VD F+ + L+IS DDFIRTTE+RH + ++L+++ D GDIY Sbjct: 90 KAEESGVTPIEYVDNIVALFKQLWKELNISNDDFIRTTEERHREVVQMLFQRAYDNGDIY 149 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 G Y GWY + DE ++ ++++ P+Q + EE YFF++S Y D+ + + Sbjct: 150 LGKYEGWYCIPDETFWPENKL---TPEHLCPDCGRPLQRISEEAYFFKMSKYADRWMKFI 206 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E +P+FI P R+NE+I FVK GL+DL +SR +F WGI +P DP++++YVW DAL NY+T Sbjct: 207 EENPDFIQPASRKNEMIQFVKGGLEDLCVSRTSFTWGIPVPFDPKHVVYVWFDALVNYIT 266 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 G +DNP+ K +FWPAD+H++GK+I+RFH+I WP L+S + LPKK++ HG+++ G Sbjct: 267 AAGIIDNPEKFK-RFWPADVHLVGKEIVRFHSIIWPIMLMSLGIELPKKIYGHGWLIVDG 325 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKS GNV+DPI +++E G DA+RY+L+ +I G+DG + ++ L R+N+DL+N +GN Sbjct: 326 EKMSKSKGNVVDPIPLLQEFGSDAIRYYLLNDIQLGQDGNFSRERLINRINSDLSNDLGN 385 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV-------LQEIRENMQNQLIHRA 413 L+ RS+SM+ K +G++ A D SI V + + LQ+ R M N I+ A Sbjct: 386 LLHRSLSMVEKYRNGVLVHGDA--SVDPSIRKVSAEIEKNAEATLQKFRNGMDNWKINDA 443 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLAN 471 + V + + +++Y D PW L K + VLY E +R ++++++ +P A Sbjct: 444 IKSVWTFIRSLNKYIDVTMPWVLAKDKAKDPALDAVLYHLCEGMRFVSLMVEPVIPIAAK 503 Query: 472 KIFDILFVAD-ENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 KI+ L + + E ++ L + G + K PIFPR Sbjct: 504 KIWSQLGLVNFEKANYKDLVWGGIVDGTKVAKGL-PIFPRI 543 >gi|310825918|ref|YP_003958275.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612] gi|308737652|gb|ADO35312.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612] Length = 641 Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust. Identities = 208/510 (40%), Positives = 320/510 (62%), Gaps = 8/510 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y++T I YP++ HIGH Y + AD L RF L G D TG DEHGQKI K A+ Sbjct: 2 KEKYYVTTPIYYPSSDLHIGHTYTTVAADTLKRFKALQGYDAYMITGIDEHGQKIEKVAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ + FVD+ + ++ ++ I +D IRTT+ H T + ++KK+ D+GDIYKG Sbjct: 62 EKGMSAQAFVDEEAARIAELWKLMRIDHDQLIRTTDPEHMKTIQRIFKKLYDQGDIYKGK 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+++ + ++ DG+ + PV+ EE YFF++S Y D+LL + E+H Sbjct: 122 YEGWYCTPCESFWTESQI---VDGKCPDCGL-PVEMASEEAYFFKMSKYADRLLEHIETH 177 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI P R+NE+I+ F+K GL+DL +SR +F WG+ + DP++++YVWIDAL NYL+ Sbjct: 178 PDFIKPESRKNEMINNFIKPGLQDLCVSRTSFSWGVPVDFDPKHVVYVWIDALPNYLSAL 237 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GYL++ ++WPA++H++GKDI+RFH IYWP L++ +LPLP +++ HG+IL KG K Sbjct: 238 GYLNDKPDLMERYWPANVHLVGKDIIRFHTIYWPIMLMALDLPLPNQIYGHGWILLKGGK 297 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNV++P+E+ + GVDALRY+L+RE+ G DG Y ++ L R+N+DLAN +GNL+ Sbjct: 298 MSKSVGNVVNPVELAGKYGVDALRYYLLREMKDGADGVYSEELLINRINSDLANDLGNLL 357 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+ +M +K +DG IP D ++ + + M RAL V LV Sbjct: 358 SRTAAMTVKYFDGKIPGQREAAALDSELIKLAQDTPEVFAGYMDKVDFSRALEAVWRLVG 417 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++Y D +PW L K N R + V+Y E +R A+++ +P+ KI + L V Sbjct: 418 RTNKYIDETEPWILYKDPKNHSRLAAVMYNLTEALRFTAVMVGPVMPETGRKILESLNVP 477 Query: 481 DENRCFQSLDQRLK-PGFMLHKTFDPIFPR 509 + R ++SL+ + P + + D +FPR Sbjct: 478 ETLRTWKSLEVFGQYPENIKIENCDVLFPR 507 >gi|150387962|ref|YP_001318011.1| methionyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] gi|149947824|gb|ABR46352.1| methionyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] Length = 655 Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust. Identities = 209/509 (41%), Positives = 320/509 (62%), Gaps = 10/509 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I YP+A+ HIGH Y + ADVLARF R G DV F TGTDEHG+KI +AAQ G+ Sbjct: 7 YLTTPIYYPSAKLHIGHTYTTVAADVLARFKRTRGYDVQFLTGTDEHGEKIQEAAQKNGM 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 K +VD+ + + +DISYD FIRTT++ H + +++ + +KGDIYK Y GW Sbjct: 67 NPKAYVDEIVEEIKKVWKSMDISYDIFIRTTDEEHERAVQKIFQTLYEKGDIYKSEYEGW 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ + + P +EE YFF+LS YQD+L+ ++E +PE Sbjct: 127 YCTPCESFWTETQL---KEDKGCPDCGRPAHLAKEEAYFFKLSKYQDRLIEHFEKYPEIC 183 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R+NE+++ F++ GL+DL +SR TFDWGI +P DP++++YVW DA+ NY+T GY Sbjct: 184 YPESRKNEMLNNFLRPGLEDLCVSRTTFDWGIPVPFDPKHVIYVWFDAVCNYITALGYTS 243 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 + K+WPA++H++ K+I+RFH I WPA L++ +PLPK V+ HG+IL +K+SKS Sbjct: 244 ENEEQYKKYWPANVHLVAKEIVRFHTIIWPAILMALEVPLPKMVYGHGWILFGSDKMSKS 303 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GN++ P +IE G+DAL+YFL+RE G+DG Y R+NADLAN +GNLVSR+V Sbjct: 304 KGNIVYPEPLIERYGIDALKYFLLREFTFGQDGNYTNRTFVTRLNADLANDLGNLVSRTV 363 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +MI K G+IP P E DE + +V + ++ + + H AL ++ +V ++ Sbjct: 364 AMIEKYNSGIIPEPKVAGEFDEDLRTVATGAAAKVEKAIDQLQFHEALEEIWKVVRRTNK 423 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADEN 483 Y D PW L K N +R +TVLY + +R +++L+Q F+ NKI++ L + A++ Sbjct: 424 YIDETTPWILAKDEENKERLNTVLYHLADTLRIVSVLIQPFMEATTNKIWEQLGIDANQG 483 Query: 484 RCFQ--SLDQRLKPGFMLHKTFDPIFPRF 510 ++ SL ++ G + K + +FPR Sbjct: 484 TTWEDASLFNQIPSGVKVRKG-ESLFPRL 511 >gi|167769712|ref|ZP_02441765.1| hypothetical protein ANACOL_01046 [Anaerotruncus colihominis DSM 17241] gi|167668073|gb|EDS12203.1| hypothetical protein ANACOL_01046 [Anaerotruncus colihominis DSM 17241] Length = 690 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 208/473 (43%), Positives = 308/473 (65%), Gaps = 7/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+T I YP+ + HIGH+Y + DV+AR+ R+ G DV+F TGTDEHGQKI + A Sbjct: 38 KTFYITTPIYYPSDKLHIGHSYCTVATDVMARYKRMQGFDVMFLTGTDEHGQKIEQKALA 97 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AGVT + +VD+ +++ ++L+IS D F+RTT+ H ++ + ++K + DKG IYKG Y Sbjct: 98 AGVTPQAYVDKIVDGIKELWNLLNISNDRFVRTTDDYHVESVQKIFKDLYDKGYIYKGSY 157 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y E+++ D ++ DG+ + V EEE YFF+LSA+ D++L YE +P Sbjct: 158 KGKYCTPCESFWTDSQL---VDGKCPDCGRE-VADAEEEAYFFKLSAFSDRILKLYEDNP 213 Query: 185 EFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 +F+ P R NE+I+ F+K GL+DL +SR +F WGI + DP++++YVW+DALTNY+T G Sbjct: 214 QFMEPQSRMNEMINNFIKPGLEDLCVSRTSFKWGIPVTFDPKHVVYVWVDALTNYITALG 273 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y + K+WPAD+H +GK+I+RFH I WPA L++ +LPLPKKVF HG++L +G K+ Sbjct: 274 YGNGRYHDFEKYWPADVHFVGKEIIRFHTIIWPAMLMALDLPLPKKVFGHGWLLLEGGKM 333 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP+ +++ GVDA+RYFL+RE G DG + + L R+NADLAN +GNLVS Sbjct: 334 SKSKGNVVDPVVLVDRYGVDAIRYFLLREFPFGSDGLFSNESLITRINADLANDLGNLVS 393 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RSV+M K + +P D+ I+S+ + + +M++ AL + L+S Sbjct: 394 RSVAMAEKYFGDALPAERKSEPIDDEIISIAKSLKETYDRHMESYAFQNALIDIFKLISR 453 Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 ++Y D PW L K N R +TV+Y +E +R AILL F+P + KIF Sbjct: 454 TNKYIDETAPWVLAKDEANRPRLATVIYNLLECVRICAILLTPFMPATSPKIF 506 >gi|227824451|ref|ZP_03989283.1| methionyl-tRNA synthetase [Acidaminococcus sp. D21] gi|226904950|gb|EEH90868.1| methionyl-tRNA synthetase [Acidaminococcus sp. D21] Length = 644 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 221/511 (43%), Positives = 313/511 (61%), Gaps = 8/511 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + +I+T I YP+A HIGHAY IAD +AR+ R +G DV F TG+DEHG KI + A+ Sbjct: 3 KPAFFITTPIYYPSANLHIGHAYCSTIADTIARYKRANGFDVRFVTGSDEHGLKIQRKAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T +VD NF+ + ++L ISY DF+R++ H + + +++ DKGDIYK Sbjct: 63 ENGMTPLQYVDGIVANFKKLWEMLGISYTDFVRSSSAEHERVVQEILQRVYDKGDIYKKK 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + E+++ D ++ + G PV+ MEEE YFFR+S Y D++L + E+H Sbjct: 123 YVGKYCVPCESFWTDRQIEEA--GGVCPDCGRPVETMEEEDYFFRMSKYADQILKHIENH 180 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P+ RRNE+I+F+K GL+DL +SR TFDWGI +P D + I YVW DAL Y T G Sbjct: 181 PDFIQPVSRRNEMIAFLKQGLEDLCISRSTFDWGIPVPFDKKQITYVWFDALLCYFTGIG 240 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 +L N + +FWP DLH++GK+I+RFH I WPA LLS LPKKV+ HG+++ G+K+ Sbjct: 241 FLRNEEEFN-RFWPVDLHLVGKEIVRFHTIIWPAMLLSMGYELPKKVYGHGWLVVNGDKM 299 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP+E I+E G DA+RYFL+ EIA G DG Y ++GL +R N DLAN +GNL Sbjct: 300 SKSKGNVVDPVEPIKEFGPDAVRYFLLSEIALGNDGNYSREGLIRRWNTDLANDLGNLQY 359 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+VSMI K + G++ + D++ ++ L R+ M I+ AL V S + Sbjct: 360 RTVSMIEKYHQGIVHKTASDHADDKAFAALAEETLGSYRKAMDEYQINDALKAVWSYIGA 419 Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA- 480 ++Y D PW L K DR V+Y + +R +AIL+ +P A KIF+ L +A Sbjct: 420 ANKYIDVTTPWILAKDPAQKDRLEAVMYNLADAVRNIAILISPMMPFTAPKIFEQLGLAV 479 Query: 481 DENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 EN + G + K PIFPR Sbjct: 480 PENFDLNEVKYGGFSDGTKVMKG-QPIFPRI 509 >gi|257870964|ref|ZP_05650617.1| methionyl-tRNA synthetase [Enterococcus gallinarum EG2] gi|257805128|gb|EEV33950.1| methionyl-tRNA synthetase [Enterococcus gallinarum EG2] Length = 668 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 214/521 (41%), Positives = 321/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+E YI+T I YP+ + HIG++Y I D +AR+ RL G DV + TG DEHGQKI K Sbjct: 1 MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAVARYKRLMGFDVFYLTGVDEHGQKIEK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GV + +VD+ + + + + LDISYD FIRTT+ H + +++++ D+GDIY Sbjct: 61 KAEELGVDPQEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKKAVQKIFQQLLDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVY+ +G + + V+ ++E YFFR+S Y D Sbjct: 121 LGEYEGWYSVSDEEYFTETQLAEVYRDEEGHVIGGKAPSGHEVELVKESSYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YY+ HPEFI P R+NE+I+ F+K GL+DL++SR TF WGI + P++++YVWID Sbjct: 181 RLVQYYDEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFKWGIPVTASPEHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPKK+F H Sbjct: 241 ALSNYITALGYGSDDDSLFQKYWPADVHMVGKEIVRFHTIYWPIMLMALDLPLPKKIFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+++ K K+SKS GNV+ P ++E +DALRY+L+R + G DG + + RVN D Sbjct: 301 GWLMMKDGKMSKSKGNVVYPEMLVERYSLDALRYYLLRAVPFGSDGVFTPEDFVSRVNYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K +G++P T D + + + V+ E M Sbjct: 361 LANDLGNLLNRTIAMINKYCEGIVPKYASKVTPYDSELSTTAANVVGRYHEAMDKMEFST 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLA 470 AL++V +L+S ++Y D +PW L K +A +V+ E +R +AILLQ + + Sbjct: 421 ALSEVWTLISRANKYIDETQPWVLAKDPEKKAELDSVMVHLAESLRIVAILLQPIMTETP 480 Query: 471 NKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 IF L + E + L P + PIFPR Sbjct: 481 ANIFHQLGLTSEAMDLKDLRFGEFPSDTKVVAKGTPIFPRL 521 >gi|294101616|ref|YP_003553474.1| methionyl-tRNA synthetase [Aminobacterium colombiense DSM 12261] gi|293616596|gb|ADE56750.1| methionyl-tRNA synthetase [Aminobacterium colombiense DSM 12261] Length = 643 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 206/474 (43%), Positives = 299/474 (63%), Gaps = 5/474 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+T I Y N PHIGHAY I ADV+AR+ R+ G V F TGTDEHGQKI ++A Sbjct: 4 KSFYITTPIYYVNDIPHIGHAYTTIAADVMARYRRMMGDRVFFCTGTDEHGQKIQQSADA 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T K D+ NFR + +VL+IS DDFIRTTE+RH + ++KK+ D+GDIYKG Y Sbjct: 64 KGMTAKELADRTMENFRRLWEVLNISNDDFIRTTEERHEKVVQGIFKKLMDQGDIYKGTY 123 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY + E Y + + + + P+Q MEEE YFFR S Y D+LL YYE + Sbjct: 124 EGWYCIPCETYVPESSM---KEDKTCPDCGRPLQKMEEESYFFRASKYSDQLLDYYEKNL 180 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 + I+P R NE++SFV+SGL+D S+SR + WGI +P D ++++YVW DAL NYLT GY Sbjct: 181 KAIMPRSRYNEIVSFVRSGLRDQSVSRTSIKWGIPVPGDEKHVVYVWFDALINYLTACGY 240 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + + + FWP+ H++GKDI+RFH + WP L++ L P VF+HG+ +GEK+S Sbjct: 241 MSDSEKLNI-FWPSVHHLVGKDIIRFHCVIWPIMLIALGLNPPVTVFAHGWWTVEGEKMS 299 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+DP E+ + GVD RYF++RE+ G DG + + + R+N+DLAN +GNL++R Sbjct: 300 KSKGNVVDPFEMADVYGVDPFRYFVLREVPFGLDGDFSEQAMVLRINSDLANDLGNLLNR 359 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 ++ M+ DG++P P F D+ I ++ ++ E+M AL + +L+ Sbjct: 360 TLQMVKNFRDGIVPAPTNFESLDKEIETLLQSTFSQVEESMSCFAYEEALKAIWALIRRG 419 Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++Y D PW+L K P +R TVL+V E++R +L+ F+P A K++ L Sbjct: 420 NKYIDETMPWKLGKEGPQERLDTVLFVLAEMLRGTGLLIAPFMPLTAEKLWGQL 473 >gi|150014947|ref|YP_001307201.1| methionyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] gi|149901412|gb|ABR32245.1| methionyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] Length = 645 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 212/511 (41%), Positives = 321/511 (62%), Gaps = 10/511 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG+ Y + AD LARF RL G DV+F TGTDEHGQKI + A+ Sbjct: 6 KKTYYITTPIYYPSTKLHIGNTYTTVAADALARFKRLTGYDVMFLTGTDEHGQKIQRIAE 65 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K VD+ +D+ +++ISYD FIRTT+ H + ++KK+ D+GDIYK Sbjct: 66 EKGITPKQHVDEVVAGIKDLWSMMNISYDKFIRTTDDYHIKAVQDIFKKLYDQGDIYKSS 125 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+++ D ++ G PV+ +EE YFF++S Y DKL+ Y E H Sbjct: 126 YEGWYCTPCESFWTDTQLVNGNCPDC----GRPVEKSKEEAYFFKMSKYADKLIKYIEDH 181 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEFI P R+NE+++ F++ GL+DL +SR +F+WG+ + D +++YVWIDAL+NY+T Sbjct: 182 PEFIQPESRKNEMLNNFLRPGLQDLCVSRTSFNWGVPVTFDESHVVYVWIDALSNYITAL 241 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY K+WPAD+H+IGKDILRFH IYWP L++ +LPLPK+VF HG++L G K Sbjct: 242 GYGQENKDLYNKYWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 301 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ ++ E GVD +RY+L++EI G DG ++ + K++N+DL N +GNL+ Sbjct: 302 MSKSKGNVVDPVVLVNEFGVDPVRYYLLKEIPFGADGLFNNEIFIKKINSDLCNDLGNLL 361 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+V+M+ K + G +P D+ ++++ +I E + I +AL V L+ Sbjct: 362 SRTVAMVEKYFGGEMPAQDEKEAIDDELINLALSAPAKIEEAINELNIPQALEYVFELIR 421 Query: 423 EVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++Y D PW L K +A TVLY E +R ++++ AF+P+ + KI + + Sbjct: 422 RANKYIDETTPWILAKDESKKARLGTVLYNLAESLRFASVMISAFLPETSKKINEQINTT 481 Query: 481 DEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + +S D +K G + K D +FPR Sbjct: 482 EISWESLKSFDG-IKAGTKVVKA-DNLFPRI 510 >gi|153956357|ref|YP_001397122.1| methionyl-tRNA synthetase [Clostridium kluyveri DSM 555] gi|219856672|ref|YP_002473794.1| hypothetical protein CKR_3329 [Clostridium kluyveri NBRC 12016] gi|146349215|gb|EDK35751.1| MetS [Clostridium kluyveri DSM 555] gi|219570396|dbj|BAH08380.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 644 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 206/475 (43%), Positives = 311/475 (65%), Gaps = 7/475 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I YP+A HIG+ Y + AD LARF R+ G DV+ TGTDEHGQKI + A+ GV Sbjct: 7 YITTPIYYPSANLHIGNTYTTVAADALARFKRITGYDVMLLTGTDEHGQKIQRLAEAKGV 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 K +VD+ +D+ +++I+YD FIRTTEK H + ++KK+ D+GDIYKG Y GW Sbjct: 67 PPKEYVDEIVAGIKDLWKIMNINYDKFIRTTEKYHIAAVQKIFKKLYDQGDIYKGNYEGW 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + V+ +EE YFF++S Y L+ + E+HP+FI Sbjct: 127 YCTPCESFWTETQL---IDGKCPDCGRT-VEKAKEEAYFFKMSKYAPALIKHIETHPDFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R+NE+++ F+K GL+DL +SR +FDWGI + D ++++YVWIDAL NY+T GY Sbjct: 183 QPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDNKHVIYVWIDALANYITALGYGS 242 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D K+WPA++H++GKDILRFH IYWP L++ +P+KVF HG++L G K+SKS Sbjct: 243 EDDKLYKKYWPANVHLVGKDILRFHTIYWPIMLMALGEEIPEKVFGHGWLLVDGGKMSKS 302 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNV+DP+ ++ G DA+RY+L+REI G DG ++ + K++N+DLAN +GNL+SR+ Sbjct: 303 KGNVVDPVVLVNHFGTDAVRYYLLREIPFGADGLFNNEIFIKKINSDLANDLGNLLSRTC 362 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +MI K +DG++P P + D+ ++ + + +I ++M + I AL + LVS ++ Sbjct: 363 TMIEKYFDGIMPAPKEKEDIDDELIGLALDIPIKIEKHMNHLRIPEALDSIWELVSRTNK 422 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 Y D PW L K + DR TVLY E +R +++ L AF+P+ + KI+ L V Sbjct: 423 YIDETTPWILAKDESKKDRLGTVLYNLSESLRIISVCLSAFLPETSEKIYKQLNV 477 >gi|269792806|ref|YP_003317710.1| methionyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100441|gb|ACZ19428.1| methionyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 647 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 218/507 (42%), Positives = 308/507 (60%), Gaps = 16/507 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E YI+T I Y N PHIGHAY I ADVLAR +R+ G D F TGTDEHGQKI + Sbjct: 1 MSESSAFYITTPIYYVNDVPHIGHAYTTIAADVLARHNRMIGRDTFFLTGTDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA G+T + DQ NF+ + VL+I+ DDFIRTTE+RH + ++ K+ +KGDIY Sbjct: 61 AASAKGLTAQQLADQTVENFKRLWKVLNITNDDFIRTTEERHERVVQHIFSKLLEKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 G Y GWY + E Y + ++ +G P+Q M EE YFFR+S YQD+LL YY Sbjct: 121 LGSYEGWYCVPCETYVPEAQM---GEGNTCPDCKRPLQKMTEESYFFRMSKYQDRLLEYY 177 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 ESHPE ILP R NE++SF+K GLKD S+SR T WG+ +P D ++++YVW DAL NYL+ Sbjct: 178 ESHPEAILPKSRYNEIVSFIKGGLKDQSISRTTLTWGVPVPGDSRHVVYVWFDALINYLS 237 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY D G KFWP H++GKDI+RFH++ WPA L++ +L PK VF+HG+ G Sbjct: 238 ALGYPDE-GGKWRKFWPVCHHLVGKDIIRFHSVVWPALLMALDLEPPKMVFAHGWWTVDG 296 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKS GNV+DP E+ E G D RYFL+RE+ G DG + + GL +R+N+DLAN +GN Sbjct: 297 DKMSKSKGNVVDPFEMAELYGPDPFRYFLLREVPFGLDGDFSERGLVQRINSDLANDLGN 356 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L++R++ M+ K G++P+ T+ + SI ++ V ++ ++ AL + S Sbjct: 357 LLNRTLQMMTKYRGGVVPSRVCPTKLESSIRAMGEDVTAQVDSLLERFAFDEALKAIWSF 416 Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + ++Y D PW+L + + VL E ++ A L+ F+P A +I+ L Sbjct: 417 IGRANKYIDETMPWKLGNEGRGEELDRVLRTLFEALKLSAQLVYPFMPDAAARIWSQL-- 474 Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPI 506 LD ++ G + +FDPI Sbjct: 475 --------GLDGQVGEG-RIRWSFDPI 492 >gi|197302731|ref|ZP_03167785.1| hypothetical protein RUMLAC_01461 [Ruminococcus lactaris ATCC 29176] gi|197298313|gb|EDY32859.1| hypothetical protein RUMLAC_01461 [Ruminococcus lactaris ATCC 29176] Length = 677 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 208/482 (43%), Positives = 316/482 (65%), Gaps = 9/482 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ K YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI Sbjct: 46 MSEKPKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIEL 105 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T K FVD+ S + + D++D SYD FIRTT++ H + ++KK+ DKGDIY Sbjct: 106 KAEEAGITPKEFVDKVSGEIKRIWDLMDTSYDKFIRTTDEDHEKQVKKIFKKLYDKGDIY 165 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y E+++ + ++ DG+ + PVQ +EE YFF++S Y D+L+ + Sbjct: 166 KGHYEGMYCTPCESFFTESQL---VDGKCPDCGR-PVQPAKEEAYFFKMSKYADRLIEHI 221 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 +HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+ Sbjct: 222 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYI 281 Query: 240 TTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 T GY + ++ K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L Sbjct: 282 TGIGYDAEGNSTEQFNKLWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLL 341 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 K+SKS GNV+ E+++ GVDA+RYF++ E+ DG + + +R+N+DLAN Sbjct: 342 QGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERLNSDLANT 401 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 +GNLV+R++SM K + G + G E D + +V + + E M++ + A+ ++ Sbjct: 402 LGNLVNRTISMTNKYFGGTVTDTGVAEEVDADLKAVVENTAKAVAEKMKDLRVADAITEI 461 Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 +L ++Y D PW L K + DR STVL+ ++ I + A LL+ ++P + KI + Sbjct: 462 FNLFKRCNKYIDETTPWVLGKDESKKDRLSTVLWNLIQGISEGARLLEPYMPSTSKKILE 521 Query: 476 IL 477 L Sbjct: 522 QL 523 >gi|251779970|ref|ZP_04822890.1| methionine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084285|gb|EES50175.1| methionine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 645 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 205/473 (43%), Positives = 305/473 (64%), Gaps = 7/473 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG+ Y + AD LARF RL G DV+F TGTDEHGQKI + A+ Sbjct: 6 KKPYYITTPIYYPSTKLHIGNTYTTVAADALARFKRLTGYDVMFLTGTDEHGQKIQRIAE 65 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T VD+ +D+ ++++SYD FIRTT++ H + ++KK+ D+GDIYK Sbjct: 66 EKGITPIEHVDEIVAGIKDLWSMMNVSYDKFIRTTDEYHVKAVQDIFKKLHDQGDIYKSS 125 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+++ D ++ G PV+ +EE YFF++S Y D+L+ Y E + Sbjct: 126 YEGWYCTPCESFWTDTQLVNGNCPDC----GRPVEKSKEEAYFFKMSKYADRLIKYIEEN 181 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P FI P R+NE+++ F++ GL+DL +SR +FDWG+ + D +++YVWIDAL+NY+T Sbjct: 182 PNFIQPESRKNEMLNNFLRPGLQDLCVSRTSFDWGVPVTFDENHVVYVWIDALSNYITAL 241 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY + KFWPAD+H+IGKDILRFH IYWP L++ +LPLPK+VF HG++L G K Sbjct: 242 GYGQDNKELYDKFWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 301 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ ++ E GVD +RY+L+REI G DG ++ + K++N+DL N +GNL+ Sbjct: 302 MSKSKGNVVDPVVLVNEFGVDPVRYYLLREIPFGADGLFNNEIFIKKINSDLCNDLGNLL 361 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SRSV+MI K +DG I E DE ++++ +++E + I AL V L+ Sbjct: 362 SRSVAMIEKYFDGEIQPQAESGEFDEELINLALAYPNKVQEAIDELNIPLALEHVFELIG 421 Query: 423 EVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++Y D PW L K +A TVLY +E +R ++++ +F+P A KI Sbjct: 422 RANKYIDETTPWILAKDESKKARLGTVLYNLIESLRFASVMISSFLPDTAKKI 474 >gi|288574650|ref|ZP_06393007.1| methionyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570391|gb|EFC91948.1| methionyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 646 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 205/483 (42%), Positives = 305/483 (63%), Gaps = 6/483 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + + YI+T I Y N PHIGHAY I ADV++R+ R+DG V F TGTDEHGQKI + Sbjct: 1 MSDSKHFYITTPIYYVNDVPHIGHAYTTIGADVMSRYKRMDGYKVFFLTGTDEHGQKIYE 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 +A+ G+T + D+ + NF+ + VL+IS DDFIRTTEKRH + ++ K+ D+GDIY Sbjct: 61 SAKAKGMTAQELTDEMAENFKRLLPVLNISNDDFIRTTEKRHERVVQSIFSKLMDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y + E Y + + + P+ MEEE YFF+ S Y D+LL YY Sbjct: 121 KGTYKGLYCVPCETYVPESSM---GENNTCPDCGRPLVEMEEESYFFKTSRYADRLLKYY 177 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E +P+ I+P R NE++SF+KSGL+D S+SR + WGI +P D ++++YVW DAL NYLT Sbjct: 178 EDNPKAIMPKTRYNEIVSFIKSGLRDQSVSRTSISWGIPVPGDEKHVIYVWFDALINYLT 237 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY D+P+ A FWP H++ KDI+RFH + WP +++ L P VFSHG+ +G Sbjct: 238 ACGYEDDPE-KLAAFWPNAHHLMAKDIIRFHCVIWPIMVMALGLNPPVGVFSHGWWTMEG 296 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKS GNV+DP E+++ G DA RYFL+R++ G DG + + + +R+N+DLAN +GN Sbjct: 297 EKMSKSKGNVVDPFEMVDLYGADAFRYFLLRQVPFGMDGDFSEAAMAQRINSDLANDLGN 356 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+SR+VSM+LK DG++P+P + D + V + L RE M + AL L Sbjct: 357 LLSRTVSMVLKYRDGIVPSPSDLSPLDIELSEVARKALDTYREKMDDFTFDEALKAAWGL 416 Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-F 478 + ++Y D PW+L + + + VL+ VE ++ +++++ F+P+ ++++ L F Sbjct: 417 IGRANKYIDETMPWKLGNEGSKEPLDAVLWGLVESLKLVSMMISPFMPETGHRVWSQLGF 476 Query: 479 VAD 481 D Sbjct: 477 CGD 479 >gi|329770195|ref|ZP_08261585.1| methionyl-tRNA synthetase [Gemella sanguinis M325] gi|328837001|gb|EGF86645.1| methionyl-tRNA synthetase [Gemella sanguinis M325] Length = 666 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 211/524 (40%), Positives = 319/524 (60%), Gaps = 21/524 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ Y++T I YP+ HIGHAY + D L R+ +L G D F TGTDEHGQKI + AQ Sbjct: 3 KKTFYVTTPIYYPSGNLHIGHAYTTVACDALTRYKKLSGYDTFFLTGTDEHGQKIQQKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ + +VD ++ + + +DI Y FIRTT+ H +++++ +KGDIY G Sbjct: 63 EKGISEQAYVDDMIKDIKKLWKAMDIDYSKFIRTTDDYHERAVAEIFERLVEKGDIYLGE 122 Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWYS+ DE Y+ + EV++ +G N V+ + EE YFF++S Y D+L+ Sbjct: 123 YQGWYSISDEEYFTETQLQEVFRDEEGNMIGGIAPSGNEVKLVSEECYFFKMSKYADRLV 182 Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 YY+ HPEFILP R+NE+++ F+K GL+DL+++R TFDWG+K+ +P++++YVWIDAL Sbjct: 183 KYYDEHPEFILPESRKNEMLNNFIKPGLEDLAVTRTTFDWGVKVKSNPKHVVYVWIDALV 242 Query: 237 NYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+T GY K+WPAD+ V+GK+I+RFH IYWP L++ +LPLPKKVF+HG+ Sbjct: 243 NYITALGYATGESEELFNKYWPADVQVVGKEIVRFHVIYWPILLMALDLPLPKKVFAHGW 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L K K+SKS GNV+DP +IE G+DA RY+L+RE+ G+DG + + R+N+DL+ Sbjct: 303 LLMKDGKMSKSKGNVVDPYMLIERYGLDAARYYLLREVPFGQDGIFTPESFIDRINSDLS 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R++SM+ K G+IP TE D+ ++ + V+ E E M+N +AL Sbjct: 363 NDLGNLLNRTISMVNKYCGGVIPKFVEPTTEFDKELIDLSKEVIAEYEEYMENMQFSKAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 V +S ++Y D PW L K N V+ E +R IL+ + + Sbjct: 423 ESVWKFISRTNKYIDQTTPWILAKDEANKPELDKVMNYLAESLRITTILISPALTNAPKE 482 Query: 473 IFDILFVADE------NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I L +++E + F D +K ++ K PIFPRF Sbjct: 483 IAKQLGISEELLTFEIAKTFGVFDGTVK---VVEKP-TPIFPRF 522 >gi|46204985|ref|ZP_00049208.2| COG0143: Methionyl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 348 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 193/317 (60%), Positives = 239/317 (75%), Gaps = 2/317 (0%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K E I+TAI+YPN PHIGHAYE+I D +ARFHRLDG DVLFTTGTDEHG KI + Sbjct: 6 KANEPFLITTAISYPNGAPHIGHAYEVIATDAIARFHRLDGRDVLFTTGTDEHGLKIQQT 65 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A AGVT + FVD + F+ +AD LD +YD FIRTTE H+ + LW+++ GDIY Sbjct: 66 AARAGVTPRAFVDDMAGRFKAVADRLDCAYDRFIRTTEADHYAAAQELWRRMEANGDIYL 125 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180 Y+GWYS+RDEAYY++ E G DG + + + PV+WMEEE + FRLS YQD+LL Y Sbjct: 126 AKYAGWYSVRDEAYYDEAETVLGPDGNRRSIKTDTPVEWMEEENFLFRLSKYQDRLLKLY 185 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E P F+ P R NEV SFV+SGLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT Sbjct: 186 EEQPGFLAPETRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVDALTNYLT 245 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 TG+ D D A+FWPA LHVIGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF L +G Sbjct: 246 VTGFPDAAD-PNARFWPASLHVIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG 304 Query: 301 EKISKSLGNVIDPIEVI 317 EK+SKSLGNV+DP++++ Sbjct: 305 EKMSKSLGNVVDPLDLV 321 >gi|188588457|ref|YP_001919550.1| methionyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] gi|188498738|gb|ACD51874.1| methionyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] Length = 645 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 205/473 (43%), Positives = 304/473 (64%), Gaps = 7/473 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG+ Y + AD LARF RL G DV+F TGTDEHGQKI + A+ Sbjct: 6 KKPYYITTPIYYPSTKLHIGNTYTTVAADALARFKRLTGYDVMFLTGTDEHGQKIQRIAE 65 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T VD+ +D+ ++++SYD FIRTT+ H + ++KK+ D+GDIYK Sbjct: 66 EKGITPIEHVDEIVAGIKDLWSMMNVSYDKFIRTTDDYHVKAVQDIFKKLHDQGDIYKSS 125 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+++ D ++ G PV+ +EE YFF++S Y D+L+ Y E + Sbjct: 126 YEGWYCTPCESFWTDTQLVNGNCPDC----GRPVEKSKEEAYFFKMSKYADRLIKYIEEN 181 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P FI P R+NE+++ F++ GL+DL +SR +FDWG+ + D +++YVWIDAL+NY+T Sbjct: 182 PNFIQPESRKNEMLNNFLRPGLQDLCVSRTSFDWGVPVTFDENHVVYVWIDALSNYITAL 241 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY + KFWPAD+H+IGKDILRFH IYWP L++ +LPLPK+VF HG++L G K Sbjct: 242 GYGQDNKDLYDKFWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 301 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ ++ E GVD +RY+L+REI G DG ++ + K++N+DL N +GNL+ Sbjct: 302 MSKSKGNVVDPVVLVNEFGVDPVRYYLLREIPFGADGLFNNEIFIKKINSDLCNDLGNLL 361 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SRSV+MI K +DG I E DE ++++ +++E + I AL V L+ Sbjct: 362 SRSVAMIEKYFDGEIQPQAESGEFDEELINLALAAPNKVQEAIDELNIPLALEHVFELIG 421 Query: 423 EVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++Y D PW L K +A TVLY +E +R ++++ +F+P A KI Sbjct: 422 RANKYIDETTPWILAKDENKKARLGTVLYNLIESLRFASVMISSFLPDTAKKI 474 >gi|291551306|emb|CBL27568.1| methionyl-tRNA synthetase [Ruminococcus torques L2-14] Length = 633 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 210/484 (43%), Positives = 315/484 (65%), Gaps = 13/484 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ K YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI Sbjct: 1 MSEKPKYYITTAIAYTSGKPHIGNTYEVVLADAIARYKRSQGYDVFFQTGTDEHGQKIEL 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T K FVD S + + D++D SYD FIRTT++ H + ++KK+ DKGDIY Sbjct: 61 KAEEAGITPKEFVDNVSTEIKRIWDLMDTSYDKFIRTTDEDHEKQVKKIFKKLYDKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y E+++ + ++ DG+ + PVQ +EE YFF++S Y D+L+ + Sbjct: 121 KGHYEGMYCTPCESFFTESQL---VDGKCPDCGR-PVQPAKEEAYFFKMSKYADRLIEHI 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 +HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+ Sbjct: 177 NTHPEFIQPVARKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYI 236 Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 T GY + DG+ K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H + Sbjct: 237 TGIGY--DADGNSTEQFNKLWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPW 294 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L K+SKS GNV+ E+++ GVDA+RYF++ E+ DG + + +R+N+DLA Sbjct: 295 LLQGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERLNSDLA 354 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N +GNLV+R+VSM K + G + G + D + +V + + M + + A+ Sbjct: 355 NTLGNLVNRTVSMTNKYFGGTVEDKGVVEDVDAELKAVVENASKAVDAKMADLRVADAIT 414 Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ +L ++Y D PW L K + DR STVL+ ++ I + A LL++F+P + KI Sbjct: 415 EIFNLFKRCNKYIDETTPWVLGKDESKKDRLSTVLWNLIQSISEGARLLESFMPSTSKKI 474 Query: 474 FDIL 477 + L Sbjct: 475 LEQL 478 >gi|225376548|ref|ZP_03753769.1| hypothetical protein ROSEINA2194_02190 [Roseburia inulinivorans DSM 16841] gi|225211585|gb|EEG93939.1| hypothetical protein ROSEINA2194_02190 [Roseburia inulinivorans DSM 16841] Length = 665 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 212/483 (43%), Positives = 316/483 (65%), Gaps = 12/483 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + K Y++TAIAY + +PHIG+ YE+++AD +AR+ R +G DV F TGTDEHGQKI + Sbjct: 1 MSNKGKYYMTTAIAYTSGKPHIGNTYEIVLADAIARYKRAEGYDVYFQTGTDEHGQKIQE 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T K FVD + + + D+++ SYD+F+RTT+ H + ++KK+ D+GDIY Sbjct: 61 KAEAAGITPKEFVDGVAGEVKAIWDLMNTSYDNFVRTTDADHEKCVKKIFKKLYDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y E+++ + ++ DG+ + V+ +EE YFF++S Y D+L+ Y Sbjct: 121 KGAYEGLYCTPCESFWTESQL---VDGKCPDCGRE-VKPAKEEAYFFKMSKYADRLIDYI 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 +HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+ Sbjct: 177 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDPKHVVYVWLDALTNYI 236 Query: 240 TTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 T GY +PDGS F WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++ Sbjct: 237 TKIGY--DPDGSSELFQKNWPADLHLIGKDIVRFHTIYWPIFLMALDLPLPKQVFGHPWL 294 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L G+K+SKS GNVI +++ GVDA RYF++ E+ DG + + +R N+DLAN Sbjct: 295 LQGGDKMSKSKGNVIYADDMVRLFGVDATRYFVLHEMPFENDGVITWELVIERFNSDLAN 354 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNLV+R++SM K +DG++ GA E DE + +V + +++E M + A+ Sbjct: 355 ILGNLVNRTISMSNKYFDGVVRKTGAAEEVDEDLKAVVTGTRDKVQEKMDKLRVADAITA 414 Query: 417 VISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 V L ++Y D PW L K + DR + VLY E I A LL +F+P+ A KI Sbjct: 415 VFDLFRRCNKYIDETTPWVLAKDEADHDRLAEVLYNLTESITIGAGLLHSFLPETAEKIV 474 Query: 475 DIL 477 + L Sbjct: 475 NQL 477 >gi|160902697|ref|YP_001568278.1| methionyl-tRNA synthetase [Petrotoga mobilis SJ95] gi|160360341|gb|ABX31955.1| methionyl-tRNA synthetase [Petrotoga mobilis SJ95] Length = 645 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 208/508 (40%), Positives = 324/508 (63%), Gaps = 3/508 (0%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K Y++T I Y N++PHIG AY I+AD++ARF R+ G DV F TGTDEHGQK+ +AA+ Sbjct: 2 DKFYVTTPIYYVNSEPHIGSAYTTIVADIVARFKRMMGYDVFFLTGTDEHGQKVLQAAKE 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + + +VD S F+++ D + ISYD F+RTT+ H T ++ K+ + GD+YKG Y Sbjct: 62 KNIPPQEYVDSLSSKFKNLWDEMGISYDHFVRTTDAYHVKTVQMFVDKMMENGDVYKGKY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 +GWY + DE+++++ E+ + + ++W+EEE YFF+LS Y + LL +YE++P Sbjct: 122 AGWYCIHDESFWDESEIVTQDGVKLCPECNRELKWVEEENYFFKLSKYTEPLLKHYENNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +F+ P RRNE++ + GLKDLS++R TFDWGI + DP++++YVW+DAL NY++ GY Sbjct: 182 DFVEPSFRRNEMLQILNDGLKDLSITRTTFDWGIPLKSDPKHVVYVWVDALINYVSAIGY 241 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D+ ++WPADLH+IGK+I RFH++ WPA L+S LPLPKKVF+HG++ G+KIS Sbjct: 242 SDDQQKFN-RYWPADLHLIGKEINRFHSLIWPAMLMSVGLPLPKKVFAHGWLTVNGQKIS 300 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSLGN +DP +++ G D +RY+L+R+IA G+DG + ++ L R NADL N + NLV R Sbjct: 301 KSLGNAVDPRILMDAYGRDVIRYYLLRDIAFGRDGDFSEENLITRYNADLVNDLSNLVHR 360 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 +++M+ K ++G+IP P + DE +L + M+ +AL + ++ Sbjct: 361 TLTMVEKYFNGVIPKPERKDKVDEELLELLESKKNAYLNLMERYQFTQALENLWEVIRFS 420 Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++Y D +PW L DR STVLY ++VIR ++IL+ +P + + + E Sbjct: 421 NKYIDLTEPWILGNDPNEKDRLSTVLYNLLDVIRIISILIYPIMPDTSETMLKKIGYGLE 480 Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 ++L++ L + DPIF R Sbjct: 481 ILNRENLEKGLLHSGVKVVKGDPIFQRI 508 >gi|187934680|ref|YP_001884366.1| methionyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B] gi|187722833|gb|ACD24054.1| methionine--tRNA ligase [Clostridium botulinum B str. Eklund 17B] Length = 645 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 204/473 (43%), Positives = 304/473 (64%), Gaps = 7/473 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG+ Y + AD LARF RL G +V+F TGTDEHGQKI + A+ Sbjct: 6 KKPYYITTPIYYPSTKLHIGNTYTTVAADALARFKRLTGYEVMFLTGTDEHGQKIQRIAE 65 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T VD+ +D+ ++++SYD FIRTT+ H + ++KK+ D+GDIYK Sbjct: 66 EKGITPIEHVDEIVAGIKDLWSMMNVSYDKFIRTTDDYHVKAVQDIFKKLHDQGDIYKSS 125 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+++ D ++ G PV+ +EE YFF++S Y D+L+ Y E + Sbjct: 126 YEGWYCTPCESFWTDTQLVNGNCPDC----GRPVEKSKEEAYFFKMSKYADRLIKYIEEN 181 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P FI P R+NE+++ F++ GL+DL +SR +FDWG+ + D +++YVWIDAL+NY+T Sbjct: 182 PNFIQPESRKNEMLNNFLRPGLQDLCVSRTSFDWGVPVTFDESHVVYVWIDALSNYITAL 241 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY + KFWPAD+H+IGKDILRFH IYWP L++ +LPLPK+VF HG++L G K Sbjct: 242 GYGQDNKELYDKFWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 301 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ ++ E GVD +RY+L+REI G DG ++ + K++N+DL N +GNL+ Sbjct: 302 MSKSKGNVVDPVVLVNEFGVDPVRYYLLREIPFGADGLFNNEIFIKKINSDLCNDLGNLL 361 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SRSV+MI K +DG I E DE ++++ +++E + I AL V L+ Sbjct: 362 SRSVAMIEKYFDGEIQPQAESGEFDEELINLALAAPNKVQEAIDELNIPLALEHVFELIG 421 Query: 423 EVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++Y D PW L K +A TVLY +E +R ++++ +F+P A KI Sbjct: 422 RANKYIDETTPWILAKDESKKARLGTVLYNLIESLRFASVMISSFLPDTAKKI 474 >gi|328954955|ref|YP_004372288.1| methionyl-tRNA synthetase [Coriobacterium glomerans PW2] gi|328455279|gb|AEB06473.1| methionyl-tRNA synthetase [Coriobacterium glomerans PW2] Length = 542 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 222/493 (45%), Positives = 303/493 (61%), Gaps = 26/493 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 YI+T I Y NA+PH+G AY ++ADV+ARF R G DV F TG DEHG+K+++AA Sbjct: 7 SFYITTPIYYVNARPHLGTAYATMLADVMARFKRASGADVKFLTGMDEHGEKVSEAAIAH 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT + + D FRDM L+IS DDFIRTTE+RH + L + + D+G IYK Y Sbjct: 67 GVTPQRWCDCMEPAFRDMWAALEISNDDFIRTTEQRHVRGVQKLLQILRDRGFIYKDAYD 126 Query: 126 GWYSLRDEAYYNDDEVYK-----GADGQ--------YYNAQHNPVQWMEEEGYFFRLSAY 172 GWY + DE Y+ + +V ADG P+Q +EEE +FF+LS + Sbjct: 127 GWYCVPDETYFTETQVRHHQEALSADGACECDPAAPMCPDCDRPLQRIEEESWFFKLSEF 186 Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 Q LL YE+HPEFI P RRNEVISFV+ GLKDLS+SR TFDWG+ +P DP+++ YVW+ Sbjct: 187 QQPLLDLYEAHPEFIQPETRRNEVISFVRGGLKDLSISRSTFDWGVPLPFDPEHVAYVWV 246 Query: 233 DALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289 DAL NYLT GY D A+ WPA +HV+GKDI+RFH + WPA L++A LPLP++ Sbjct: 247 DALINYLTAVGYGRGGDEEAAELAYRWPAQMHVVGKDIIRFHCVIWPALLMAAGLPLPER 306 Query: 290 VFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 VF HGF+ + EK+SKS GN I P EVIE +GVDA RY+ + ++A G D Sbjct: 307 VFVHGFLTVRNEQTGGAEKMSKSRGNAISPEEVIELLGVDAYRYYFMGDVAHGTDAPISW 366 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 +++ NADLAN GNLVSR++SM K + G P E+ ++ C + + Sbjct: 367 GRMRQVYNADLANSWGNLVSRALSMSAKYFAGGSPARPQDFEAPSALKDACEGIYERYAS 426 Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAI 460 +M+ RAL +V+++VS +RY + PW L T+P RA S V++ +EVIR A Sbjct: 427 HMEEVEYGRALGEVLAVVSAANRYIEDTAPWAL-ATDPARAAELSHVIWSLLEVIRIAAA 485 Query: 461 LLQAFVPKLANKI 473 L F+P ++ ++ Sbjct: 486 LYDPFMPAISAEV 498 >gi|332178180|gb|AEE13869.1| Methionyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796] Length = 508 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 221/510 (43%), Positives = 316/510 (61%), Gaps = 12/510 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+T I Y N +PHIGHAY + DVLARF RL G DV F TGTDEHG+KI KAA+N Sbjct: 3 KSFYITTPIYYVNDKPHIGHAYTTVACDVLARFRRLQGKDVFFLTGTDEHGRKIQKAAEN 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 K +VD+ ++ F+D L+IS DDFIRTT++RH+ W+ ++D GDIYKG Y Sbjct: 63 NSSDAKSYVDRFAKIFQDAWLALNISNDDFIRTTQERHYKAVAKFWQIVNDNGDIYKGKY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SGWY + E +++D+++ DG+ + V+WMEEE YFFRLS Y LL Y Sbjct: 123 SGWYCVPCETFFSDEQL---VDGKCPDCGRE-VEWMEEESYFFRLSKYTQPLLELYNDKK 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 F++P RRNEVI FV GLKDLS+SR F WGIK+PDDP +++YVW DAL NYLT G+ Sbjct: 179 NFVMPDFRRNEVIQFVSQGLKDLSISRSKFSWGIKVPDDPGHVIYVWFDALLNYLTAAGF 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 ++ + K + WPAD+HV+GK+I+RFHA+ WPA L+SA LPLPK VF HG+ +GEK+S Sbjct: 239 AEDEEKFK-RIWPADVHVVGKEIVRFHAVIWPAMLMSAKLPLPKMVFGHGWWTMEGEKMS 297 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+D + ++VGVD +RYFL++ + G+DG + GLK+ +NADLAN GNL++R Sbjct: 298 KSKGNVVDIWALSKDVGVDPMRYFLMKAVPFGQDGDFSYKGLKEILNADLANDFGNLLNR 357 Query: 365 SVSMILKDYDGMIPTPGAFTESDESIL---SVCSRVLQEIRENMQNQLIHRALAQVISLV 421 + SM L+ Y+ T + ES + ++ + + I ++ N L ++++L+ Sbjct: 358 TASM-LERYNNSSLTEADKLFNKESFVKLRAIFDGMKERIEKHYDNLSFSFVLEEIMTLI 416 Query: 422 SEVDRYFDAQKPW-ELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +++ D PW K+ D ++ Y EV+R +I L F+P ++ + L + Sbjct: 417 KGANKFLDETAPWRSFKEKGFDLEVASTFYHVFEVVRLSSIALYPFMPTISKDVLRRLSI 476 Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 E + L P + +PIF R Sbjct: 477 YGEP-SWSEFSWGLLPMPCKIEKGEPIFKR 505 >gi|307243786|ref|ZP_07525918.1| methionine--tRNA ligase [Peptostreptococcus stomatis DSM 17678] gi|306492840|gb|EFM64861.1| methionine--tRNA ligase [Peptostreptococcus stomatis DSM 17678] Length = 646 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 206/483 (42%), Positives = 312/483 (64%), Gaps = 7/483 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + Y++T I YP+ + HIGHAY I AD +ARF R G DV F TGTDEHG+KI K Sbjct: 1 MTSKPTFYVTTPIYYPSGKLHIGHAYTTIAADAIARFKRFCGYDVRFLTGTDEHGEKIQK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A AG + F+D+ + + + L+IS DDFIRTTE+RH + ++ K+ +KG+IY Sbjct: 61 KAHEAGKSEIEFLDEQIAEIKKLWEKLEISNDDFIRTTEERHEKAIQKIFTKLYEKGEIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y + E+++ + ++ +G + V+ EE YFFRLS YQD+L+ + Sbjct: 121 KGSYEGHYCVPCESFWTESQMLEGNKCPDCGRETKVVK---EESYFFRLSKYQDRLMDLF 177 Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 + + +F++P R+NE+I +F++ GL+DLS++R +FDWGIK+P D ++I+YVW+DAL NY+ Sbjct: 178 Q-NTDFVMPESRKNEMIKNFLEPGLEDLSVTRTSFDWGIKVPFDEKHIIYVWVDALCNYI 236 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T GY + D + KFWPAD+H++ K+I+RFH I WPA L++ ++P+PK+VF HG+IL Sbjct: 237 TALGYEGDDDTNYKKFWPADVHLVAKEIVRFHTIIWPALLMALDIPVPKRVFGHGWILFA 296 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 +K+SKS GN++ P ++++ GVDAL+YFL+RE + G+DG Y R+N+DLAN +G Sbjct: 297 DDKMSKSKGNIVYPGQMVDRYGVDALKYFLLREFSFGQDGSYTHRNFINRINSDLANDLG 356 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLVSR++SM+ K +G++ A TE D+ ++ V + M + H AL + Sbjct: 357 NLVSRTISMVEKYNEGVLVVNDAGTEFDQDLIDTYREVRADFEGQMNELMFHEALESLWK 416 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V ++Y D PW L K N D+ + VLY E IR ++ L+ + +P+ A KIFD L Sbjct: 417 FVRRTNKYIDETMPWVLAKDEANKDQLNHVLYNLCESIRLISTLISSLLPETARKIFDQL 476 Query: 478 FVA 480 +A Sbjct: 477 GIA 479 >gi|284048773|ref|YP_003399112.1| methionyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] gi|283952994|gb|ADB47797.1| methionyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] Length = 650 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 211/509 (41%), Positives = 311/509 (61%), Gaps = 6/509 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + YI+T I YP+A HIGHAY IAD +AR+ R +G DV F TG+DEHG KI + A+ Sbjct: 3 KPAFYITTPIYYPSADLHIGHAYCTTIADTIARYKRANGFDVQFITGSDEHGLKIQRKAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 + GV + D+ +F+ + ++L +SY F+RT+ H T + L +K+ ++GDIYK Sbjct: 63 SFGVKPIEYTDKIVADFKKLWEMLGVSYTSFVRTSSPEHEKTVQTLLQKVWEQGDIYKKD 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + E+++ + +V + G PV+ M E YFFR+S Y D++L Y E+H Sbjct: 123 YEGLYCVPCESFWTEHQVEEA--GGVCPDCGRPVEKMRESSYFFRMSKYADRILEYIETH 180 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P+ RRNE+I+F+K GL+DL +SR +FDWGI++P DP++++YVW DAL Y T G Sbjct: 181 PDFIQPVSRRNEMINFIKQGLEDLCISRSSFDWGIQVPFDPKHVVYVWFDALLAYFTGIG 240 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 + + D +FWPADLH++GK+I+RFH I WPA L++ LPK+V+ HG+++ G+K+ Sbjct: 241 FGRDMDKFN-RFWPADLHLVGKEIVRFHTIIWPAMLMAMGFDLPKEVYGHGWLVVDGDKM 299 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP++ I+E G DA+RYFL+REI G DG Y + GL KR N+DLAN +GNL Sbjct: 300 SKSKGNVVDPVQPIQEFGADAVRYFLLREINLGSDGNYSRKGLIKRFNSDLANDLGNLQY 359 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+VSMI K + G++ +E+DE S+ + LQ R M ++ + + + V Sbjct: 360 RTVSMIDKYHGGIVHKTVVESETDEKFRSLAAETLQNYRAAMDKYALNDGIKAIWAYVGA 419 Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVA 480 ++Y D PW L K R V+Y + +R +AIL+ + +P A KIF+ L Sbjct: 420 ANKYIDETTPWILAKDPAQAKRLEAVMYNLADAVRNIAILISSMMPFTAPKIFEQLGLTV 479 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 E + P PIFPR Sbjct: 480 PEQFNLNDVAWGNFPDGTKVAKGQPIFPR 508 >gi|163782331|ref|ZP_02177329.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp. 128-5-R1-1] gi|159882364|gb|EDP75870.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp. 128-5-R1-1] Length = 493 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 219/487 (44%), Positives = 303/487 (62%), Gaps = 19/487 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K Y++T I Y N PHIGHAY I AD +ARF+RL G DV F TGTDEHG KI K+A+ Sbjct: 2 KKFYVTTPIYYVNDVPHIGHAYTTIAADTVARFYRLRGYDVFFLTGTDEHGLKIQKSAEE 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ K D+NS NF+ + + L I Y FIRTT+ H + + ++ K + GDIY G Y Sbjct: 62 RGVSPKELADRNSENFKRLWEFLGIEYTKFIRTTDPEHVELVKEVFTKSYENGDIYLGEY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY + E + ++ E+ A+G P +++ E YFFRLS YQDKLL YE HP Sbjct: 122 EGWYCVGCEEFKSEMEL---AEGNSCPIHMKPCEYIREPSYFFRLSKYQDKLLELYEEHP 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 EF+ P RRNE+ISFVK GLKDLS++R WGI +P D + +YVW DAL NY++ Sbjct: 179 EFVRPDYRRNEIISFVKQGLKDLSVTRPRSRVRWGIPVPFDEGHTIYVWFDALFNYISAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 +G ++WPADLH++GKDILRFH +YWPAFL S +P+ VF+HG+ +G+K Sbjct: 239 ------NGQVDRYWPADLHIVGKDILRFHTVYWPAFLFSVGYEVPETVFAHGWWTVEGKK 292 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKSLGNVI P EV+EE G+D +RYFL+RE+ G+DG + K+ + R+N +LAN IGNL Sbjct: 293 MSKSLGNVISPYEVVEEYGLDEVRYFLLREVPFGQDGDFSKEAILNRINGELANEIGNLF 352 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR VSM K G + G D++ + V++ M+ +RAL +V+ L S Sbjct: 353 SRVVSMSKKYLGGKVEGRG-----DDAYRELAGDVVERYEGYMREVNFYRALEEVLRLSS 407 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP---KLANKIFDILFV 479 +++Y D + PWEL K + VLY V+ + LA LL F+P KLA ++ + + Sbjct: 408 FLNKYVDEKAPWELAKRGDENLRDVLYTLVDGLFLLAYLLTPFMPNKMKLAMEMLGVERM 467 Query: 480 ADENRCF 486 +E + F Sbjct: 468 PEEVKPF 474 >gi|291547427|emb|CBL20535.1| methionyl-tRNA synthetase [Ruminococcus sp. SR1/5] Length = 659 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 219/496 (44%), Positives = 321/496 (64%), Gaps = 15/496 (3%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E+++ YISTAIAY + +PHIG+ YE+++AD +ARF R G DV F TGTDEHGQKI A Sbjct: 2 EKQRYYISTAIAYTSGKPHIGNTYEVVLADAIARFKRQQGYDVYFQTGTDEHGQKIELKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + AGVT K FVD S + + D+++ SYD FIRTT+K H + + ++KK+ KGDIYKG Sbjct: 62 EEAGVTPKEFVDNVSGEIKRIWDLMNTSYDKFIRTTDKDHEEQVKKIFKKMYAKGDIYKG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y E+++ + ++ DG+ + P +EE YFF++S Y DKL+ Y + Sbjct: 122 HYEGMYCTPCESFFTESQL---VDGKCPDCGR-PCVPAKEEAYFFKMSKYADKLIDYINT 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HP+FI P R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+T Sbjct: 178 HPDFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 237 Query: 242 TGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 GY + DG+ + K+WPADLH+IGKDI+RFH IYWP FL+S +LPLPK+VF H ++L Sbjct: 238 IGY--DCDGNSSDKFNKYWPADLHLIGKDIIRFHTIYWPIFLMSLDLPLPKQVFGHPWLL 295 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 K+SKS GNVI E++E GVDA+RYF++ E+ DG + + +R+N+DLAN Sbjct: 296 QGDGKMSKSKGNVIYADELVEFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSDLANT 355 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 +GNLV+R++SM K ++G++ DE + S +V + + M + A+ +V Sbjct: 356 LGNLVNRTISMSNKYFNGVVENKNVIEPVDEDLKSFILQVPKNVSAKMDKLRVADAITEV 415 Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 SL ++Y D PW L K T DR +TVLY VE I A LL++F+P+ +I Sbjct: 416 FSLFKRCNKYIDETMPWALAKDETKQDRLATVLYNLVEGICIGASLLKSFMPRTTERIL- 474 Query: 476 ILFVADENRCFQSLDQ 491 + A+E R + ++Q Sbjct: 475 VQLNANE-RTLEEMEQ 489 >gi|282857419|ref|ZP_06266652.1| methionine--tRNA ligase [Pyramidobacter piscolens W5455] gi|282584704|gb|EFB90039.1| methionine--tRNA ligase [Pyramidobacter piscolens W5455] Length = 651 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 212/474 (44%), Positives = 292/474 (61%), Gaps = 10/474 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+T I Y N PHIGHAY I AD +AR+ R+DG DV F TGTDEHGQK++++A Sbjct: 4 KSFYITTPIYYVNDVPHIGHAYTTIAADAMARYKRMDGCDVFFLTGTDEHGQKVSESAAK 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + D+ ++NFRD+ ++D S DDFIRTTE RH + ++KK+ D+GDIYKG Y Sbjct: 64 KGMTPQQLTDELAQNFRDLLPLIDASNDDFIRTTEARHVKVVQQIFKKLLDQGDIYKGTY 123 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQ--HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 GWY + E Y V + + G+ + H P++ MEEE YF R SAY D+LL +YE+ Sbjct: 124 KGWYCVPCETY-----VPEASQGENHTCPDCHRPLKEMEEESYFLRTSAYADRLLEFYEA 178 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 HP+ I P R NEV+SF++ G+KD S+SR + WGI +P D ++ +YVW DAL NYLT Sbjct: 179 HPDAIKPKVRYNEVVSFLRMGMKDQSISRTSVPWGIPVPGDEKHTVYVWFDALINYLTAC 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY + + KFWP H++GKDI+RFH I WP LL+ L P V+SHG+ GEK Sbjct: 239 GYGSD-EAKMKKFWPVVNHLVGKDIIRFHCIVWPIMLLALGLTPPACVYSHGWWTRDGEK 297 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP E++ G D RYFL+R++ G DG + + L +RVN+DLAN +GNL+ Sbjct: 298 MSKSKGNVVDPHEMVGLYGSDVFRYFLLRQVTFGFDGDFSELALVQRVNSDLANDLGNLL 357 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+V+MI K G +P P A D + E R M N AL + S++ Sbjct: 358 SRTVTMIEKYRGGAVPAPAALESLDVEVKEQALNAFAEYRAFMDNYQFDDALKALWSMIG 417 Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 ++Y D PW+L K R TVL E ++ A++L +PK A KI+ Sbjct: 418 RANKYIDETMPWKLGKDESLAARLDTVLATLAEELKLAALMLAPVMPKTAVKIW 471 >gi|300214134|gb|ADJ78550.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA [Lactobacillus salivarius CECT 5713] Length = 675 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 214/522 (40%), Positives = 323/522 (61%), Gaps = 12/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG++Y I DVLAR+ RL G DV F TGTDEHG KI + Sbjct: 1 MGEKPTFYITTPIYYPSGKLHIGNSYTTIACDVLARYKRLQGYDVFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ G+ + +VD+ + + +++ L+I+ D FIRTT+ H + +++K+ KGDIY Sbjct: 61 KAQALGMQPQEYVDKMAADIKELWKKLEITNDKFIRTTDDYHEKAVQNIFEKLLAKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVY+ DG + + VQ +EE+ YFF++S Y D Sbjct: 121 LGKYRGWYSVSDEEYFTESQLAEVYRDEDGNMIGGKAPSGHEVQLVEEDCYFFKMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YYE HP+FI+P R+NE+++ F+K GL+DL+L+R +F+WG+K+P +P++++YVWID Sbjct: 181 RLVKYYEEHPDFIIPDTRKNEMLNNFIKPGLEDLALTRTSFNWGVKVPSNPEHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY+T GY D S K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK + Sbjct: 241 ALCNYITALGYETGDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILMALDLPLPKHIIG 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG++L + K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + ++N Sbjct: 301 HGWLLMRDGKMSKSKGNVVYPEMIVERYGLDALRYYLMRAVPFGNDGVFTPEDFIGKINF 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN +GNL++R+V+MI K G IP T D+ + V + ++ E M + Sbjct: 361 DLANDLGNLLNRTVAMINKYRGGQIPELKSGVTAFDKDLEDVAANTIKNFEEQMDSVHFS 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 AL +V LV+ ++Y D +PW L K T D +VL +R +AIL+Q + Sbjct: 421 NALDEVWKLVARSNKYIDETEPWILAKDETKKDELDSVLAHLAASLRLVAILIQPVMTHT 480 Query: 470 ANKIFDILFVADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510 +IF L + ++ Q + L G + PIFPR Sbjct: 481 PKEIFAQLGLNSDDMAIQGVSYFDLPAGAQVVAKGTPIFPRL 522 >gi|227891852|ref|ZP_04009657.1| methionyl-tRNA synthetase / protein secretion chaperonin CsaA [Lactobacillus salivarius ATCC 11741] gi|227866315|gb|EEJ73736.1| methionyl-tRNA synthetase / protein secretion chaperonin CsaA [Lactobacillus salivarius ATCC 11741] Length = 675 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 214/522 (40%), Positives = 323/522 (61%), Gaps = 12/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG++Y I DVLAR+ RL G DV F TGTDEHG KI + Sbjct: 1 MGEKPTFYITTPIYYPSGKLHIGNSYTTIACDVLARYKRLQGYDVFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ G+ + +VD+ + + +++ L+I+ D FIRTT+ H + +++K+ KGDIY Sbjct: 61 KAQALGMQPQEYVDKMAADIKELWKKLEITNDKFIRTTDDYHEKAVQNIFEKLLAKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVY+ DG + + VQ +EE+ YFF++S Y D Sbjct: 121 LGKYRGWYSVSDEEYFTESQLAEVYRDEDGNMIGGKAPSGHEVQLVEEDCYFFKMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YYE HP+FI+P R+NE+++ F+K GL+DL+L+R +F+WG+K+P +P++++YVWID Sbjct: 181 RLVKYYEEHPDFIIPDTRKNEMLNNFIKPGLEDLALTRTSFNWGVKVPSNPEHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY+T GY D S K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK + Sbjct: 241 ALCNYITALGYETGDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILMALDLPLPKHIIG 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG++L + K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + ++N Sbjct: 301 HGWLLMRDGKMSKSKGNVVYPEMIVERYGLDALRYYLMRAVPFGNDGVFTPEDFIGKINF 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN +GNL++R+V+MI K G IP T D+ + V + ++ E M + Sbjct: 361 DLANDLGNLLNRTVAMINKYRGGQIPELKSGVTAFDKDLEDVAANTIKNFEEQMDSVHFS 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 AL +V LV+ ++Y D +PW L K T D +VL +R +AIL+Q + Sbjct: 421 NALDEVWKLVARSNKYIDETEPWILAKDETKKDELDSVLAHLAASLRLVAILIQPVMTHT 480 Query: 470 ANKIFDILFVADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510 +IF L + ++ Q + L G + PIFPR Sbjct: 481 PKEIFAQLGLNSDDMAIQGVSYFDLPAGAQVVAKGTPIFPRL 522 >gi|301299606|ref|ZP_07205867.1| methionine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852793|gb|EFK80416.1| methionine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 675 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 214/522 (40%), Positives = 323/522 (61%), Gaps = 12/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG++Y I DVLAR+ RL G DV F TGTDEHG KI + Sbjct: 1 MGEKPTFYITTPIYYPSGKLHIGNSYTTIACDVLARYKRLQGYDVFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ G+ + +VD+ + + +++ L+I+ D FIRTT+ H + +++K+ KGDIY Sbjct: 61 KAQALGMQPQEYVDKMAADIKELWKKLEITNDKFIRTTDDYHEKAVQNIFEKLLAKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVY+ DG + + VQ +EE+ YFF++S Y D Sbjct: 121 LGKYRGWYSVSDEEYFTESQLAEVYRDEDGNMIGGKAPSGHEVQLVEEDCYFFKMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YYE HP+FI+P R+NE+++ F+K GL+DL+L+R +F+WG+K+P +P++++YVWID Sbjct: 181 RLVKYYEEHPDFIIPDTRKNEMLNNFIKPGLEDLALTRTSFNWGVKVPSNPEHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY+T GY D S K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK + Sbjct: 241 ALYNYITALGYETGDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILMALDLPLPKHIIG 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG++L + K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + ++N Sbjct: 301 HGWLLMRDGKMSKSKGNVVYPEMIVERYGLDALRYYLMRAVPFGNDGVFTPEDFIGKINF 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN +GNL++R+V+MI K G IP T D+ + V + ++ E M + Sbjct: 361 DLANDLGNLLNRTVAMINKYRGGQIPELKSGVTAFDKDLEDVAANTIKNFEEQMDSVHFS 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 AL +V LV+ ++Y D +PW L K T D +VL +R +AIL+Q + Sbjct: 421 NALDEVWKLVARSNKYIDETEPWILTKDETKKDELDSVLAHLAASLRLVAILIQPVMTHT 480 Query: 470 ANKIFDILFVADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510 +IF L + ++ Q + L G + PIFPR Sbjct: 481 PKEIFAQLGLNSDDMAIQGVSYFDLPAGAQVVAKGTPIFPRL 522 >gi|22537699|ref|NP_688550.1| methionyl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|25011651|ref|NP_736046.1| methionyl-tRNA synthetase [Streptococcus agalactiae NEM316] gi|76788328|ref|YP_330181.1| methionyl-tRNA synthetase [Streptococcus agalactiae A909] gi|77413421|ref|ZP_00789613.1| methionyl-tRNA synthetase [Streptococcus agalactiae 515] gi|22534588|gb|AAN00423.1|AE014263_2 methionyl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|24413191|emb|CAD47270.1| methionyl-tRNA synthetase [Streptococcus agalactiae NEM316] gi|76563385|gb|ABA45969.1| methionyl-tRNA synthetase [Streptococcus agalactiae A909] gi|77160515|gb|EAO71634.1| methionyl-tRNA synthetase [Streptococcus agalactiae 515] Length = 665 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 209/520 (40%), Positives = 329/520 (63%), Gaps = 10/520 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ R+ G DV + TG DEHGQKI + Sbjct: 1 MTEKKSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + + + + ++LDISYD FIRTT+ H + +++++ +GDIY Sbjct: 61 KAEEAGITPQEYVDGMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE ++ + EVY+ +G + V+ + EE YFFR+S Y D Sbjct: 121 LGEYTGWYSVSDEEFFTESQLAEVYRDENGNMIGGVAPSGHEVEKVSEESYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L +YY HPEFI P R NE++ +F++ GL+DL++SR T+ WG+++P +P++++YVWID Sbjct: 181 RLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSNPKHVIYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY++ GY + D S+ KFWPAD+H+IGKDILRFH+IYWP L++ +LPLPK++ + Sbjct: 241 ALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMALDLPLPKRLVA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + + K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 +LAN +GNL++R+++M+ K +DG +P T+ D + SV + ++ + M+ R Sbjct: 361 ELANDLGNLLNRTIAMVNKYFDGEVPRFAVATDFDADLASVATDSIENYHKQMEAVDFPR 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL V +L+S ++Y D PW L K T+ D+ + V+ V +R +A L+Q F+ + + Sbjct: 421 ALEAVWNLISRTNKYIDETAPWVLAKDETDRDKLAAVMSHLVASLRVVAHLIQPFMMETS 480 Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + I + L + + L G + PIFPR Sbjct: 481 DAIMEQLGLGATFDLEKLTFADLPEGVRVVAKGSPIFPRL 520 >gi|303229591|ref|ZP_07316379.1| methionine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] gi|302515716|gb|EFL57670.1| methionine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] Length = 649 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 212/514 (41%), Positives = 314/514 (61%), Gaps = 11/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+A+ HIGH Y +AD +ARF RL G DV F TG+DEHGQKI +AA+ Sbjct: 5 KKTFYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAAE 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + F+ + + + IS DDFIRTT+ RH + L+ K +KGDIYK Sbjct: 65 AQGITPLEYTTNIVNGFKALWEKMHISNDDFIRTTDARHEKVVQELFTKAYEKGDIYKAE 124 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+++ + ++ + PV+ ++EE YFF+L Y D+ L + E + Sbjct: 125 YEGWYCTPCESFWTEQKL---GENHTCPDCGRPVERVKEESYFFKLGKYTDQWLKFIEEN 181 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNE+I FVK GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++ Sbjct: 182 PDFIQPESRRNEMIQFVKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISALS 241 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 D KFWPADLH++GK+I+RFH I WP L+S LPLPKKVF HG+++ G K+ Sbjct: 242 PFDGDGELYKKFWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNVIDP +I+ G D+LRY+L+ EI G DG + ++NADL+N +GNL++ Sbjct: 302 SKSLGNVIDPNPLIDTYGADSLRYYLLSEITLGHDGNFTLPNFVTKINADLSNDLGNLLN 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+++MI K + G+I + D+ I S+ + + + M+ +++AL V + +S Sbjct: 362 RTIAMIEKYHGGIITKTNDVDDLDKEISSLAEQTVADFEAQMEAMELNKALKTVWAFISR 421 Query: 424 VDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +++Y D PW L K++ + R +V+Y E +R +A+L+ +P A KI+D L + Sbjct: 422 MNKYIDETMPWVLAKSSDETDVRRLQSVMYHLAESLRIIAVLVSPVIPVGAPKIWDQLGL 481 Query: 480 ADENRCFQSLDQRLKPGFMLHKTF---DPIFPRF 510 Q D R G +PI+PRF Sbjct: 482 GGFEHV-QLDDVRTWGGIQTGTKVVKGEPIYPRF 514 >gi|317495634|ref|ZP_07954001.1| methionyl-tRNA synthetase [Gemella moribillum M424] gi|316914253|gb|EFV35732.1| methionyl-tRNA synthetase [Gemella moribillum M424] Length = 665 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 213/527 (40%), Positives = 316/527 (59%), Gaps = 27/527 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ Y++T I YP+ HIGHAY + D L R+ +L G D F TGTDEHGQKI + AQ Sbjct: 3 KKTFYVTTPIYYPSGNLHIGHAYTTVACDALTRYKKLSGFDTYFLTGTDEHGQKIQQKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ + +VD ++ + + +DI Y FIRTT+ H +++++ +KGDIY G Sbjct: 63 EKGVSEQQYVDDMIKDIKKLWSAMDIDYSKFIRTTDGYHERAVAEIFERLVEKGDIYLGE 122 Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWYS+ DE Y+ + EV++ DG N V+ + EE YFF++S Y D+L+ Sbjct: 123 YKGWYSISDEEYFTETQLQEVFRDEDGNMIGGIAPSGNEVKLVSEECYFFKMSKYADRLV 182 Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 YY+ HPEFILP R+NE+++ F+K GL+DL+++R TFDWG+K+ +P++++YVWIDAL Sbjct: 183 KYYDEHPEFILPESRKNEMLNNFIKPGLEDLAVTRTTFDWGVKVKSNPKHVVYVWIDALV 242 Query: 237 NYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+T GY K+WPAD+ V+GK+I+RFH IYWP L++ +LPLPKK+F+HG+ Sbjct: 243 NYITALGYATGESEELFNKYWPADVQVVGKEIVRFHVIYWPILLMALDLPLPKKIFAHGW 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L K K+SKS GNV+DP +IE G+DA RY+L+RE+ G+DG + + R+N+DL+ Sbjct: 303 LLMKDGKMSKSKGNVVDPYMLIERYGLDAARYYLLREVPFGQDGIFTPESFIDRINSDLS 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R++SMI K +G+IP TE D ++ + V+ E M+N +AL Sbjct: 363 NDLGNLLNRTISMINKYCNGVIPKFVEPTTEFDTELIELSKEVIDEYDGYMENMQFSKAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472 V +S ++Y D PW L K + V+ E +R IL+ P L N Sbjct: 423 ESVWKFISRTNKYIDQTTPWILAKDEASKGELDKVMNYLAESLRIATILIS---PALTNA 479 Query: 473 ---------IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + D L + + F D K ++ K PIFPRF Sbjct: 480 PKEIKVQLGLSDDLLTFETAKTFGVFDGTTK---VVEKP-TPIFPRF 522 >gi|283768674|ref|ZP_06341586.1| methionyl-tRNA synthetase, alpha subunit [Bulleidia extructa W1219] gi|283105066|gb|EFC06438.1| methionyl-tRNA synthetase, alpha subunit [Bulleidia extructa W1219] Length = 647 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 208/495 (42%), Positives = 312/495 (63%), Gaps = 10/495 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+TAIAY + +PHIG+ YE+++AD +AR+ +++G DV F TGTDEHGQK+ + Sbjct: 1 MSEKKPYYITTAIAYTSGKPHIGNVYEIVLADAIARYKKMEGYDVRFQTGTDEHGQKVEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ G T K FVD+ + + DV+++ YD FIRTT+ H + +++K D+GDIY Sbjct: 61 KAQEQGKTPKAFVDEMATIVKKQFDVMNVQYDRFIRTTDADHEKQVQKIFRKFYDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y DEA++ ++ + + P M+EE YFFR+S Y D+L+ Y Sbjct: 121 KGEYEGMYCEEDEAFFTTSQLTEEGCCPVCGGKVKP---MKEETYFFRMSKYADRLMKYI 177 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 E HP+FI P R+NE+++ F+K GL+DLS+SR +F WGI + DP++++YVWIDAL+NY+ Sbjct: 178 EDHPDFIQPESRKNEIVNNFLKPGLQDLSVSRTSFKWGIPVDFDPKHVIYVWIDALSNYI 237 Query: 240 TTTGYL--DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 T GY N D K+WPADLH+IGKDI+RFH IYWP L++ +LPLPK+VF H +++ Sbjct: 238 TGLGYEVDGNHDPLFKKYWPADLHLIGKDIIRFHTIYWPIMLMALDLPLPKQVFGHPWLM 297 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 K+SKSLGNVI +++ GVDA+RY + E+ +DG D + +R+N+DLAN Sbjct: 298 VGESKMSKSLGNVIYADDMVHVFGVDAMRYIFLHEMPFAQDGHITYDLMMERINSDLANN 357 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 +GNLV+R++SM K ++G++ P D + +++ M+ + A+ + Sbjct: 358 MGNLVNRTISMQNKYFNGIVANPHVDETLDTEFKRTILGKVTDVKAQMEELRVQDAIGTI 417 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + L S ++Y D PW L K + R +TVLY +E IR ILL+ F+P+ + KI Sbjct: 418 LELFSRCNKYIDETMPWSLAKDSDQIGRLATVLYNLLEAIRIGGILLRPFLPETSAKILA 477 Query: 476 ILFVADENRCFQSLD 490 L + F+S D Sbjct: 478 NL--NTQQTSFESCD 490 >gi|291520365|emb|CBK75586.1| methionyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4] Length = 657 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 213/484 (44%), Positives = 311/484 (64%), Gaps = 14/484 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + YI+TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI Sbjct: 1 MGNKGNYYITTAIAYTSGKPHIGNTYEIVLADSIARFRRQEGYDVFFQTGTDEHGQKIEL 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A AG+T K FVD S + + D+++ SYD FIRTT++ H + ++KK+ DKGDIY Sbjct: 61 KAAEAGITPKEFVDNVSGQVKSIWDLMNTSYDKFIRTTDEDHEKQVKKIFKKLYDKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y G Y E+++ + ++ DG+ + VQ +EE YFF++S Y DKL+ Y Sbjct: 121 KSSYEGLYCTPCESFWTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADKLIDYI 176 Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 +HPEFI P+ R+NE++ +F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+ Sbjct: 177 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKHVVYVWLDALTNYI 236 Query: 240 TTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 T GY + + S WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L Sbjct: 237 TGIGYECDGESSDQFKALWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLL 296 Query: 298 HKG-----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 K +K+SKS GNVI E+++ GVDA+RYF++ E+ DG + +RVN+ Sbjct: 297 TKSADGGDDKMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPFENDGAISWPLMVERVNS 356 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 DLAN +GNLV+R++SM K + G++ G E D + +VC+ + + + M + + Sbjct: 357 DLANTLGNLVNRTISMSNKYFGGVVEDKGVAEEVDADLKAVCTGTVTAVEKKMADLRVAD 416 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 A+ +V +L ++Y D PW L K DR +TVLY VE I A LL+AF+P+ + Sbjct: 417 AITEVFNLFKRCNKYIDETMPWALAKDEAKKDRLATVLYNLVEGISIGATLLKAFMPETS 476 Query: 471 NKIF 474 KI Sbjct: 477 EKIL 480 >gi|77411392|ref|ZP_00787739.1| methionyl-tRNA synthetase [Streptococcus agalactiae CJB111] gi|77162565|gb|EAO73529.1| methionyl-tRNA synthetase [Streptococcus agalactiae CJB111] Length = 665 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 208/520 (40%), Positives = 327/520 (62%), Gaps = 10/520 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ R+ G DV + TG DEHGQKI + Sbjct: 1 MTEKKSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + + + + ++LDISYD FIRTT+ H + +++++ +GDIY Sbjct: 61 KAEEAGITPQEYVDGMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE ++ + EVY+ +G + V+ + EE YFFR+S Y D Sbjct: 121 LGEYTGWYSVSDEEFFTESQLAEVYRDENGNMIGGVAPSGHEVEKVSEESYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L +YY HPEFI P R NE++ +F++ GL+DL++SR T+ WG+++P +P++++YVWID Sbjct: 181 RLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSNPKHVIYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY++ GY + D S+ KFWPAD+H+IGKDILRFH+IYWP L++ +LPLPK++ + Sbjct: 241 ALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMALDLPLPKRLVA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + + K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 +LAN +GNL++R+++M+ K +DG +P T+ D + SV + ++ + M+ R Sbjct: 361 ELANDLGNLLNRTIAMVNKYFDGEVPRFAVATDFDADLASVATDSIENYHKQMEAVDFPR 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL V +L+S ++Y D PW L K T+ D+ V+ +R +A L+Q F+ + + Sbjct: 421 ALEAVWNLISRTNKYIDETAPWVLAKDETDRDKLEAVMSHLAASLRVVAHLIQPFMMETS 480 Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + I + L + + L G + PIFPR Sbjct: 481 DAIMEQLGLGTTFDLEKLTFAGLPEGVRVVAKGSPIFPRL 520 >gi|94969057|ref|YP_591105.1| methionyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] gi|94551107|gb|ABF41031.1| methionyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] Length = 671 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 212/485 (43%), Positives = 304/485 (62%), Gaps = 12/485 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++K YI+T I Y NA+PHIGH Y + D +AR R+ G+D F TGTDEHGQKI ++A Sbjct: 3 KDKFYITTPIYYVNARPHIGHTYTTVACDAIARRKRMLGVDTFFLTGTDEHGQKIERSAM 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 +G + + FVD+ S FR + D + +SYD FIRTT+ H + L K++ D+G IYKG Sbjct: 63 ASGKSDQQFVDEVSAEFRGLWDRMGLSYDKFIRTTDPEHIRGVQALIKRLQDRGYIYKGK 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 YSG Y + DE Y + D G P + + EE YFF+LSA ++ LL Y S Sbjct: 123 YSGQYCVYDELYVDVD-----TPGAPCPECGRPTETVHEENYFFKLSAMEEPLLKLYASD 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P FI P RRNEVISFV+ GLKDLS+SR TF WGI +PDDP +++YVWIDAL NY+T G Sbjct: 178 PNFIRPEARRNEVISFVRGGLKDLSISRTTFKWGIPVPDDPAHVIYVWIDALCNYITALG 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 + + KFWPAD+H++GK+I+RFH ++WPA L++A LPLPK + +HG++L + K+ Sbjct: 238 FGSDDTKLYDKFWPADVHMVGKEIVRFHCVFWPAVLMAAGLPLPKSIVAHGWLLFEESKM 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GN++ +++ +G DALRYFL+RE+ G+DG + D L +R NADLANG+GNL S Sbjct: 298 SKSRGNIVRTETILDVLGADALRYFLMREVVFGQDGSFSFDALVQRFNADLANGLGNLAS 357 Query: 364 RSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 R++SMI + + G +P P + T +D++I + ++ +++ +AL L Sbjct: 358 RTLSMITRYFKGEVPYPSSAATRTAADDAIAKIAAKTIEDFGAAFDQYQFSKALEAAWGL 417 Query: 421 VSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 V+ VD+Y +PW L + + R +TVLY E +R + L +P KI+ Sbjct: 418 VAAVDKYIVENEPWALAEKQDEQSRARLATVLYTAAEALRIVTALAYPVIPDSTAKIWSQ 477 Query: 477 LFVAD 481 L + D Sbjct: 478 LGLGD 482 >gi|86609674|ref|YP_478436.1| methionyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558216|gb|ABD03173.1| methionyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 518 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 206/473 (43%), Positives = 295/473 (62%), Gaps = 7/473 (1%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+T I Y NA PHIG AY ++AD +AR+HRL G DVL TGTDEHGQKI + A+ G+ Sbjct: 8 ITTPIYYVNAAPHIGSAYTTLVADAIARYHRLRGKDVLMVTGTDEHGQKIQRTAEERGIP 67 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D+ + F + +LDI YD FIRTT RH R ++++ D+GDI+ G GWY Sbjct: 68 PQQHCDEIAAQFAQLWQLLDIRYDRFIRTTNPRHKAIVREFFQRVWDQGDIFIGRQQGWY 127 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + ++ E+ +G + + V+W +EE YFFRLS YQ+KL + Y HPEFI Sbjct: 128 CVACEEFKDEAELLEGGFCPLHPTKK--VEWKDEENYFFRLSRYQEKLEALYAEHPEFIQ 185 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT-GYLDN 247 P RRNEVI+FVK GL+D S+SR + WGI P DP +YVW DAL NY++ D Sbjct: 186 PESRRNEVINFVKQGLRDFSISRPSVSWGIPFPADPGQTLYVWFDALINYISAALDPDDE 245 Query: 248 PDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 P + A ++WPAD+H++GKDI+RFHAIYWPA L+SA LPLPK+VF HGF+ G K+SK Sbjct: 246 PTLANALRRYWPADVHLVGKDIVRFHAIYWPAMLMSAGLPLPKQVFGHGFLTKDGLKMSK 305 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGN +DP E++++ G DA+RY+ + EI GKDG + + +NADLAN +GNL++R+ Sbjct: 306 SLGNTVDPFELVQQYGADAVRYYFLTEIELGKDGDFSEGRFVDVLNADLANDLGNLLNRT 365 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 ++M L+ Y P +D + ++ R+ + + + A + +SL + Sbjct: 366 LNM-LRKYQSDYRVPAVGIPADHPLKTLAERLAPAVADAYERLDPSSAARKALSLAQASN 424 Query: 426 RYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +Y D Q PW L K+ +R + +LY +E +R +A+LL +P L+ KI L Sbjct: 425 KYLDEQAPWTLHKQGQNERVAQILYAVLESVRWVAVLLSPLIPALSLKILQQL 477 >gi|77406524|ref|ZP_00783576.1| methionyl-tRNA synthetase [Streptococcus agalactiae H36B] gi|77174863|gb|EAO77680.1| methionyl-tRNA synthetase [Streptococcus agalactiae H36B] Length = 665 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 208/520 (40%), Positives = 327/520 (62%), Gaps = 10/520 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ R+ G DV + TG DEHGQKI + Sbjct: 1 MTEKKSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + + + + ++LDISYD FIRTT+ H + +++++ +GDIY Sbjct: 61 KAEEAGITPQEYVDGMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE ++ + EVY+ +G + V+ + EE YFFR+S Y D Sbjct: 121 LGEYTGWYSVSDEEFFTESQLAEVYRDENGNMIGGVAPSGHEVEKVSEESYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L +YY HPEFI P R NE++ +F++ GL+DL++SR T+ WG+++P +P++++YVWID Sbjct: 181 RLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSNPKHVIYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY++ GY + D S+ KFWPAD+H+IGKDILRFH+IYWP L++ +LPLPK++ + Sbjct: 241 ALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMALDLPLPKRLVA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + + K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMQDGKMSKSKGNVVYPEMLVEXXGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 +LAN +GNL++R+++M+ K +DG +P T+ D + SV + ++ + M+ R Sbjct: 361 ELANDLGNLLNRTIAMVNKYFDGEVPRFAVATDFDADLASVATDSIENYHKQMEAVDFPR 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL V +L+S ++Y D PW L K T+ D+ V+ +R +A L+Q F+ + + Sbjct: 421 ALEAVWNLISRTNKYIDETAPWVLAKDETDRDKLEAVMSHLAASLRVVAHLIQPFMMETS 480 Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + I + L + + L G + PIFPR Sbjct: 481 DAIMEQLGLGTTFDLEKLTFAGLPEGVRVVAKGSPIFPRL 520 >gi|15672774|ref|NP_266948.1| methyonyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|25009394|sp|Q9CHE0|SYM_LACLA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|12723712|gb|AAK04890.1|AE006312_10 methyonyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] Length = 662 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 211/519 (40%), Positives = 319/519 (61%), Gaps = 10/519 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E + YI+T I YP+ + H+G +Y I DVLAR+ RL G D + TG DEHG KI + Sbjct: 1 MTENKTFYITTPIYYPSGKLHLGSSYTTIACDVLARYKRLMGFDTFYLTGLDEHGMKIQR 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T K ++D + + +++ LDISYD FIRTT+ H + ++++ ++ DIY Sbjct: 61 KAEELGMTPKEYLDPMAADVQELWKKLDISYDKFIRTTDTYHEEAVAKAFEQLLEQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE ++ + +E+++ G + V+W+EEE YFFR+ Y D Sbjct: 121 LGKYAGWYSVSDEEFFTETQLEEIFRDESGNITGGIAPSGHEVEWVEEETYFFRMGKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 LL YY+ HP+FI P R+NE+++ F+K GL+DL+L+R +F WGI +P +P++++YVW D Sbjct: 181 WLLQYYDEHPDFIQPEVRKNEMVNNFIKPGLEDLALTRTSFTWGIPVPSNPKHVVYVWFD 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T GY + D + K+WP ++++GK+I+RFH IYWP L + LP PKK+F+H Sbjct: 241 ALLNYITALGYNSDNDSNFKKYWPG-INMVGKEIVRFHTIYWPIMLHALGLPAPKKIFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P +IE G+DA+RY+L+R I+ G+DG + + R+N D Sbjct: 300 GWLLMKDGKMSKSKGNVVYPEMLIERYGLDAVRYYLMRAISFGQDGIFTPEDFVGRINFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 LAN +GNL++R+VSMI K DG I G TE D S+ V + + M + A Sbjct: 360 LANDLGNLLNRTVSMINKYNDGKIEATGVSTEFDASLEEVVEETISHFHKAMDKFEFNVA 419 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 LA V +L+S ++Y D PW L K+ D+A + VLY E +R LLQ F+ + Sbjct: 420 LADVWTLISRTNKYIDETAPWVLAKSEDDKAKLNNVLYHLAENLRIAGALLQPFMRATSG 479 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 KIF+ L + + + ++L + PIFPR Sbjct: 480 KIFEQLGMDERSFSLENLSFGYSFTHPVVAKGQPIFPRL 518 >gi|326406343|gb|ADZ63414.1| methionyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56] Length = 662 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 211/519 (40%), Positives = 319/519 (61%), Gaps = 10/519 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E + YI+T I YP+ + H+G +Y I DVLAR+ RL G D + TG DEHG KI + Sbjct: 1 MTENKTFYITTPIYYPSGKLHLGSSYTTIACDVLARYKRLMGFDTFYLTGLDEHGMKIQR 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T K ++D + + +++ LDISYD FIRTT+ H + ++++ ++ DIY Sbjct: 61 KAEELGMTPKEYLDPMAADVQELWKKLDISYDKFIRTTDTYHEEAVAKAFEQLLEQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE ++ + +E+++ G + V+W+EEE YFFR+ Y D Sbjct: 121 LGKYAGWYSVSDEEFFTETQLEEIFRDESGNITGGIAPSGHEVEWVEEETYFFRMGKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 LL YY+ HP+FI P R+NE+++ F+K GL+DL+L+R +F WGI +P +P++++YVW D Sbjct: 181 WLLQYYDEHPDFIQPEVRKNEMVNNFIKPGLEDLALTRTSFTWGIPVPSNPKHVVYVWFD 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T GY + D + K+WP ++++GK+I+RFH IYWP L + LP PKK+F+H Sbjct: 241 ALLNYITALGYNSDNDSNFKKYWPG-INMVGKEIVRFHTIYWPIMLHALGLPAPKKIFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P +IE G+DA+RY+L+R I+ G+DG + + R+N D Sbjct: 300 GWLLMKDGKMSKSKGNVVYPEMLIERYGLDAVRYYLMRAISFGQDGIFTPEDFVGRINFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 LAN +GNL++R+VSMI K DG I G TE D S+ V + + M + A Sbjct: 360 LANDLGNLLNRTVSMINKYNDGKIEATGVSTEFDASLEEVVEETISHFHKAMDKFEFNVA 419 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 LA V +L+S ++Y D PW L K+ D+A + VLY E +R LLQ F+ + Sbjct: 420 LADVWTLISRTNKYIDETAPWVLAKSEDDKAKLNNVLYHLAENLRIAGALLQPFMRATSG 479 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 KIF+ L + + + ++L + PIFPR Sbjct: 480 KIFEQLGMDERSFSLENLSFGYSFTHPVVAKGQPIFPRL 518 >gi|329121037|ref|ZP_08249668.1| methionine--tRNA ligase [Dialister micraerophilus DSM 19965] gi|327471199|gb|EGF16653.1| methionine--tRNA ligase [Dialister micraerophilus DSM 19965] Length = 634 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 221/526 (42%), Positives = 326/526 (61%), Gaps = 28/526 (5%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+A+ HIGH Y +AD +ARF RLDG DV F G+DEHGQKI + Sbjct: 1 MSEKQAFYITTPIYYPSAKLHIGHTYCTTVADTVARFKRLDGKDVFFLCGSDEHGQKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A AGVT +VD+ + F+ + L+IS DDFIRTTE+RH + L+ K DKGDIY Sbjct: 61 KATEAGVTPIEYVDKIVKGFQQLWKELNISNDDFIRTTEERHIKVVQKLFHKAYDKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 KG Y GWY + E ++ + ++ +G AD + + + EE YFF++S Y D+ L Sbjct: 121 KGKYEGWYCVPCETFWPESKLLEGNLCADCK------RECKRVSEEAYFFKMSKYADRWL 174 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237 + E +P FI P RRNE+I FVK+GL+DL +SR +F WGI +P DP++++YVW DALTN Sbjct: 175 KFIEENPHFIEPESRRNEMIQFVKNGLEDLCVSRTSFSWGIPVPFDPKHVVYVWFDALTN 234 Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 YLT G D+ + K K+WPAD+H++GK+I+RFH I WP L+S ++ +PK+V+ HG+++ Sbjct: 235 YLTAVGIKDDKEKFK-KYWPADVHLVGKEIVRFHTIIWPIMLMSLDIEIPKQVYGHGWLV 293 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 +GEK+SKS GNV+DPI +I E G DA+RY+L+ +I G DG + +D L R+N+DL+N Sbjct: 294 VEGEKMSKSKGNVVDPIPLIHEFGSDAIRYYLMNDIQLGSDGNFGRDRLINRINSDLSND 353 Query: 358 IGNLVSRSVSMILK-----DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 +GNL+ R++SM+ K Y G I ++ +I + VL+ + M N I+ Sbjct: 354 LGNLLYRTLSMVEKYRNGIVYKGDITGDKVIEDASLNIENDLINVLENYKYGMNNWKIND 413 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL V + V +++Y D PW L K + D VLY E +R ++I + +P A Sbjct: 414 ALKSVWTYVRSLNKYIDITMPWTLAKDESKKDLLDAVLYHLCEGLRVVSIFVSPVIPIAA 473 Query: 471 NKIFDILFVADENRCFQSLD------QRLKPGFMLHKTFDPIFPRF 510 K+++ L + D F+S+ + + ++K PIFPR Sbjct: 474 EKMWNQLGLKD----FKSVQLSDVTWGKFEENTKINKGL-PIFPRI 514 >gi|325663738|ref|ZP_08152142.1| hypothetical protein HMPREF0490_02883 [Lachnospiraceae bacterium 4_1_37FAA] gi|325470231|gb|EGC73464.1| hypothetical protein HMPREF0490_02883 [Lachnospiraceae bacterium 4_1_37FAA] Length = 643 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 214/497 (43%), Positives = 318/497 (63%), Gaps = 13/497 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++K Y++TAIAY + +PHIG+ YE ++AD +AR+ R G DV F TGTDEHGQKI A Sbjct: 13 DKKKFYMTTAIAYTSGKPHIGNTYEFVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKA 72 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 Q AGVT K FVD + +++AD+++ SYD FIRTT++ H + ++KK+ ++GDIYKG Sbjct: 73 QEAGVTPKEFVDGVAAQVKEIADLMNTSYDKFIRTTDEYHEKQVQKIFKKLYEQGDIYKG 132 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y EA++ + ++ DG+ + VQ +EE YFF++S Y D+L+ + + Sbjct: 133 YYEGMYCTPCEAFFTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADRLIEHINT 188 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+T Sbjct: 189 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKHVVYVWLDALTNYITG 248 Query: 242 TGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GY + + S+ K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L Sbjct: 249 IGYDCDGENSEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQG 308 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GNVI E++ GVDA+RYF++ E+ DG + + +R+N+DLAN +G Sbjct: 309 DGKMSKSKGNVIYADELVNMFGVDAVRYFVLHEMPFDNDGVITWELMVERMNSDLANTLG 368 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLV+R++SM K + G++ G E D + +V R + E M + A+ ++ + Sbjct: 369 NLVNRTISMTNKYFGGIVTDKGITEEVDAELKAVVERTPGAVDEKMDKLRVADAITEIFN 428 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L ++Y D PW L K DR TVLY + I + A LL +F+P+ + KI L Sbjct: 429 LFKRCNKYIDETMPWALAKEEAKKDRLETVLYNLITSISKGAELLSSFMPETSEKILAQL 488 Query: 478 ---FVADENR-CFQSLD 490 V D+ FQ LD Sbjct: 489 NGGHVTDKPEILFQRLD 505 >gi|331087261|ref|ZP_08336331.1| hypothetical protein HMPREF0987_02634 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330408947|gb|EGG88408.1| hypothetical protein HMPREF0987_02634 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 632 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 214/497 (43%), Positives = 318/497 (63%), Gaps = 13/497 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++K Y++TAIAY + +PHIG+ YE ++AD +AR+ R G DV F TGTDEHGQKI A Sbjct: 2 DKKKFYMTTAIAYTSGKPHIGNTYEFVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 Q AGVT K FVD + +++AD+++ SYD FIRTT++ H + ++KK+ ++GDIYKG Sbjct: 62 QEAGVTPKEFVDGVAAQVKEIADLMNTSYDKFIRTTDEYHEKQVQKIFKKLYEQGDIYKG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y EA++ + ++ DG+ + VQ +EE YFF++S Y D+L+ + + Sbjct: 122 YYEGMYCTPCEAFFTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADRLIEHINT 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+T Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKHVVYVWLDALTNYITG 237 Query: 242 TGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GY + + S+ K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L Sbjct: 238 IGYDCDGENSEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQG 297 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GNVI E++ GVDA+RYF++ E+ DG + + +R+N+DLAN +G Sbjct: 298 DGKMSKSKGNVIYADELVNMFGVDAVRYFVLHEMPFDNDGVITWELMVERMNSDLANTLG 357 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLV+R++SM K + G++ G E D + +V R + E M + A+ ++ + Sbjct: 358 NLVNRTISMTNKYFGGIVTDKGIAEEVDAELKAVVERTPGAVDEKMDKLRVADAITEIFN 417 Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L ++Y D PW L K DR TVLY + I + A LL +F+P+ + KI L Sbjct: 418 LFKRCNKYIDETMPWALAKEEDKKDRLETVLYNLITSISKGAELLSSFMPETSEKILAQL 477 Query: 478 ---FVADENR-CFQSLD 490 V D+ FQ LD Sbjct: 478 NGGHVTDKPEILFQRLD 494 >gi|125624554|ref|YP_001033037.1| MetS protein [Lactococcus lactis subsp. cremoris MG1363] gi|281491288|ref|YP_003353268.1| methionyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] gi|124493362|emb|CAL98336.1| MetS protein [Lactococcus lactis subsp. cremoris MG1363] gi|281375029|gb|ADA64547.1| Methionyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] gi|300071348|gb|ADJ60748.1| Methionyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000] Length = 662 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 211/519 (40%), Positives = 318/519 (61%), Gaps = 10/519 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E + YI+T I YP+ + H+G +Y I DVLAR+ RL G D + TG DEHG KI + Sbjct: 1 MTENKTFYITTPIYYPSGKLHLGSSYTTIACDVLARYKRLMGFDTFYLTGLDEHGMKIQR 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T K ++D + + +++ LDISYD FIRTT+ H + ++++ ++ DIY Sbjct: 61 KAEELGMTPKEYLDPMAADVQELWKKLDISYDKFIRTTDTYHEEAVAKAFEQLLEQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE ++ + +E+++ G + V+W+EEE YFFR+ Y D Sbjct: 121 LGKYAGWYSVSDEEFFTETQLEEIFRDESGNITGGIAPSGHEVEWVEEETYFFRMGKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 LL YY+ HP+FI P R+NE+++ F+K GL+DL+L+R +F WGI +P +P++++YVW D Sbjct: 181 WLLQYYDEHPDFIQPEVRKNEMVNNFIKPGLEDLALTRTSFTWGIPVPSNPKHVVYVWFD 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T GY + D + K+WP ++++GK+I+RFH IYWP L + LP PKK+F H Sbjct: 241 ALLNYITALGYNSDNDSNFKKYWPG-INMVGKEIVRFHTIYWPIMLHALGLPAPKKIFGH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P +IE G+DA+RY+L+R I+ G+DG + + R+N D Sbjct: 300 GWLLMKDGKMSKSKGNVVYPEMLIERYGLDAVRYYLMRAISFGQDGIFTPEDFVGRINFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 LAN +GNL++R+VSMI K DG I G TE D S+ V + + M + A Sbjct: 360 LANDLGNLLNRTVSMINKYNDGKIEATGVSTEFDASLEEVVEETISHFHKAMDKFEFNVA 419 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 LA V +L+S ++Y D PW L K+ D+A + VLY E +R LLQ F+ + Sbjct: 420 LADVWTLISRTNKYIDETAPWVLAKSEDDKAKLNNVLYHLAENLRIAGALLQPFMRATSG 479 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 KIF+ L + + + ++L + PIFPR Sbjct: 480 KIFEQLGMDERSFSLENLSFGYSFTHPVVAKGQPIFPRL 518 >gi|160947754|ref|ZP_02094921.1| hypothetical protein PEPMIC_01689 [Parvimonas micra ATCC 33270] gi|158446888|gb|EDP23883.1| hypothetical protein PEPMIC_01689 [Parvimonas micra ATCC 33270] Length = 649 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 202/473 (42%), Positives = 304/473 (64%), Gaps = 7/473 (1%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E++ Y++T I YPN+ H+GH Y I+ADVL ++ + G DV FTTGTDEHGQK+ ++A Sbjct: 2 EKKNFYLTTPIYYPNSNLHLGHTYTTIVADVLKKYKQAQGFDVFFTTGTDEHGQKLQESA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG ++D + +++ LDI +D F+R+T+K H ++ K+ +KG+IYKG Sbjct: 62 IKAGKAPLEYIDPIVESAKELWRTLDIDFDAFVRSTDKIHEKNVSEIFTKLYEKGEIYKG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y + EA++ + ++ +G + +P EEE YFFRLS YQD+LL YE Sbjct: 122 SYKGMYCVPCEAFWTESQLVEGNKCPDCGREVSP---SEEETYFFRLSKYQDRLLKLYEE 178 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 +P+FI P R+NE+ISF+ GL DLS++R +FDWG+++P D ++++YVWIDAL+ YLT Sbjct: 179 NPDFIQPESRKNEMISFINEGLTDLSVTRSSFDWGVRVPFDEKHVVYVWIDALSCYLTGI 238 Query: 243 GYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY D K KFWP D+H+IGK+I+RFHAI WPA L++ +LPLPKK+F HG+IL + Sbjct: 239 GY--GTDEEKFNKFWPCDVHLIGKEIMRFHAIIWPAILMALDLPLPKKIFGHGWILFDDD 296 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GN++ +IE G+DALRYF++RE G+DG + + R+N+DL N +GNL Sbjct: 297 KMSKSKGNIVYAEPIIERYGMDALRYFMLREFTFGQDGNFTYTKMLNRINSDLVNDLGNL 356 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 VSRSV+M K +DG +P+ TE D ++ + + + E M AL ++ LV Sbjct: 357 VSRSVAMCEKYFDGFVPSQTELTELDNDLIEIATTTRDRVAELMDKLNFSMALEEIWKLV 416 Query: 422 SEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++Y D PW L K+ +R TV+Y +E IR ++ L++ F+ + + +I Sbjct: 417 RRTNKYIDETTPWTLIKEQKEERLKTVIYNLLESIRIISGLIKPFMKETSLRI 469 >gi|158604929|gb|ABW74748.1| methionyl-tRNA synthetase [Campylobacter concisus 13826] Length = 644 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 221/511 (43%), Positives = 319/511 (62%), Gaps = 10/511 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK YI+T I Y N PHIGHAY IIAD LARF+RL G + F TGTDEHGQKI +AA+ Sbjct: 2 KEKAYITTPIYYVNDVPHIGHAYTTIIADTLARFNRLQGKETYFMTGTDEHGQKIEQAAR 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T K + D+ S FR + D +ISYD FIRTT++ H T + +++K+ GDIYKG Sbjct: 62 ARGKTPKEYADEISAKFRSLWDEFEISYDHFIRTTDEEHKQTVQNVFEKMQVNGDIYKGE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G+Y + E ++N ++ + D + + ++EE YFF+LS Y+D LL +YE+ Sbjct: 122 YEGFYCVSCETFFNQRDLLE--DNRCPDCGR-VTSLVKEESYFFKLSKYEDALLKWYEND 178 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLT 240 ++P ++NEV+SFVK GLKDLS++R +FDWGIK+P +D +++MYVW+DAL NYLT Sbjct: 179 ELCVIPKGKKNEVVSFVKGGLKDLSVTRTSFDWGIKLPKSANDDKHVMYVWLDALINYLT 238 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 T GY + D ++ FWP H++GKDILRFHA+YWPAFL+S LPLPK V +HG+ G Sbjct: 239 TLGY--SRDNARMDFWPHTTHIVGKDILRFHAVYWPAFLMSLGLPLPKHVAAHGWWTIDG 296 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKS GNVI+P EV G++ RYFL+RE+ G+DG Y + L +R+N++L NG+GN Sbjct: 297 EKMSKSKGNVINPREVANAYGLENFRYFLLREVPFGQDGDYSQKALIERINSELGNGLGN 356 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+SR V M K D I + + ++ L L E +N++N +R L + + Sbjct: 357 LLSRIVGMSAKYSDYKIDSKDVI-KFHKAELDEAKGYLDEAIKNLENLATNRYLEDLWKV 415 Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 V+ + +PW L K D A+ ++ + ++ ++AILL +PK KI D L Sbjct: 416 VTLANAAVAKYEPWSLVKAGKSDEANALVALCANLLAKVAILLSPAMPKTCAKIADTLGF 475 Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + ++SL + + K P+FPR Sbjct: 476 SIDTASYESLVLKNEISNFTAKATGPLFPRI 506 >gi|295425704|ref|ZP_06818391.1| methionine--tRNA ligase [Lactobacillus amylolyticus DSM 11664] gi|295064720|gb|EFG55641.1| methionine--tRNA ligase [Lactobacillus amylolyticus DSM 11664] Length = 658 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 215/524 (41%), Positives = 322/524 (61%), Gaps = 18/524 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + IG+AY I AD +AR+ R G D F TGTDEHG KI + Sbjct: 1 MADKKTFYITTPIYYPSGKLTIGNAYTTIAADSMARYKRAQGYDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD+ + +++ + +LDISYD FIRTT+ +H + +++K+ +GDIY Sbjct: 61 KAEKQGIKPQEFVDKMAASYKKLWKMLDISYDKFIRTTDPQHVKAVQKIFEKLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVYK DG + + VQ + E YFF++S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDDGNVIGGKAPSGHEVQLVREPSYFFKMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YY+ HP+FILP R E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 181 RLVQYYKDHPDFILPHSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY D K+WPAD+H++GK+I+RFH IYWP L++ LPLPK++F H Sbjct: 241 ALSNYITALGYGSYDDSLFRKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKQIFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P ++E G+DALRY+L+REI G DG + + +RVN D Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVERYGLDALRYYLMREIPFGSDGIFTPEDFVERVNFD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+VSMI + DG + P E ++ + E ++ M + Sbjct: 361 LANDLGNLLNRTVSMINQYQDGEVAPVASDQDELGTDLIKTAKETIAEYQKQMDALHFSQ 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL + L+S ++Y D PW L K+ + S V+ E +R +AIL+ + + Sbjct: 421 ALDAIWKLISRANKYIDETTPWTLNKEGKKEELSRVMSNLAESLRIVAILISPIMTESPL 480 Query: 472 KIFDILFV----ADENRC-FQSLDQRLKPGFMLHKTFDPIFPRF 510 K+F L + A+E + F D +K + + PIFPR Sbjct: 481 KMFKQLGLDWNNAEEKKLEFAGFDWNVK----VTEKPTPIFPRL 520 >gi|320527169|ref|ZP_08028356.1| methionyl-tRNA synthetase [Solobacterium moorei F0204] gi|320132497|gb|EFW25040.1| methionyl-tRNA synthetase [Solobacterium moorei F0204] Length = 646 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 210/519 (40%), Positives = 328/519 (63%), Gaps = 16/519 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M+ ++ YI+TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQK+ + Sbjct: 1 MENKKPYYITTAIAYTSGKPHIGNVYEIVLADAIARFKRAEGYDVRFQTGTDEHGQKVEE 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG T K FVD + + DV++ SYD FIRTT++ H + ++KK D+GDIY Sbjct: 61 KAKAAGKTPKQFVDDVAAVIKQQFDVMNTSYDYFIRTTDEAHERQVQKIFKKFYDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y DEA+Y ++ + + P M+EE YFF++S Y D+L+ Y Sbjct: 121 KGYYEGLYCQEDEAFYTKSQLTEDGKCPVCGGEVVP---MKEEAYFFKMSKYADQLMKYI 177 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 + HP FI P R+NE+++ F+K GL+DL +SR +F WGI + DP++++YVWIDAL+NY+ Sbjct: 178 DEHPHFIQPESRKNEMVNNFLKPGLQDLCVSRTSFKWGIPVEFDPKHVVYVWIDALSNYI 237 Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 T GY + DG+ K+WPADLH+IGKDI+RFH IYWP L++ PLPK+VF H + Sbjct: 238 TGLGY--DADGNHGPLYKKYWPADLHLIGKDIIRFHTIYWPIMLMALKEPLPKQVFGHPW 295 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L K+SKS GNVI ++++ GVDA+R+ ++ E+ +DG D + +R+N+DLA Sbjct: 296 LLIGDSKMSKSHGNVIYADDLVKLFGVDAVRFIMLHEMPFAQDGHVTYDLMIERINSDLA 355 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N +GNLV+R++SM K + G++ P D+ + + + ++++ E M + A+ Sbjct: 356 NNLGNLVNRTISMQNKYFGGVVANPNVSEPIDDELKAFATGTVKKVVEKMDELRVADAIQ 415 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ L S ++Y D PW L K + +R +TVLY +E +R A+L++ F P+ + KI Sbjct: 416 DILDLFSRCNKYIDETTPWALAKDSEKIERLATVLYNLLESVRIAAVLMEPFFPETSKKI 475 Query: 474 FDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 D L + R F+++ + +L+ G + + + +F R Sbjct: 476 LDDL--NTQQRDFETISEFGKLETGIHVAEKPEILFARI 512 >gi|90961208|ref|YP_535124.1| methionyl-tRNA synthetase / protein secretion chaperonin CsaA [Lactobacillus salivarius UCC118] gi|90820402|gb|ABD99041.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA [Lactobacillus salivarius UCC118] Length = 675 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 213/522 (40%), Positives = 322/522 (61%), Gaps = 12/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG++Y I DVLAR+ RL G DV F TGTDEHG KI + Sbjct: 1 MGEKPTFYITTPIYYPSGKLHIGNSYTTIACDVLARYKRLQGYDVFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ G+ + +VD+ + + +++ L+I+ D FIRTT+ H + +++K+ KGDIY Sbjct: 61 KAQALGMQPQEYVDKMAADIKELWKKLEITNDKFIRTTDDYHEKAVQNIFEKLLAKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVY+ DG + + VQ +EE+ YFF++S Y D Sbjct: 121 LGKYRGWYSVSDEEYFTESQLAEVYRDEDGNMIGGKAPSGHEVQLVEEDCYFFKMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YYE HP+FI+P R+NE+++ F+K GL+DL+L+R +F+WG+K+P +P++++YVWID Sbjct: 181 RLVKYYEEHPDFIIPDTRKNEMLNNFIKPGLEDLALTRTSFNWGVKVPSNPEHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY+T GY D S K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK + Sbjct: 241 ALCNYITALGYETGDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILMALDLPLPKHIIG 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG++L + K+SKS GNV+ P ++E G+DALRY+L+ + G DG + + ++N Sbjct: 301 HGWLLMRDGKMSKSKGNVVYPEMIVERYGLDALRYYLMIAVPFGNDGVFTPEDFIGKINF 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN +GNL++R+V+MI K G IP T D+ + V + ++ E M + Sbjct: 361 DLANDLGNLLNRTVAMINKYRGGQIPELKSGVTAFDKDLEDVAANTIKNFEEQMDSVHFS 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 AL +V LV+ ++Y D +PW L K T D +VL +R +AIL+Q + Sbjct: 421 NALDEVWKLVARSNKYIDETEPWILAKDETKKDELDSVLAHLAASLRLVAILIQPVMTHT 480 Query: 470 ANKIFDILFVADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510 +IF L + ++ Q + L G + PIFPR Sbjct: 481 PKEIFAQLGLNSDDMAIQGVSYFDLPAGAQVVAKGTPIFPRL 522 >gi|325264425|ref|ZP_08131156.1| methionine--tRNA ligase [Clostridium sp. D5] gi|324030496|gb|EGB91780.1| methionine--tRNA ligase [Clostridium sp. D5] Length = 645 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 213/501 (42%), Positives = 322/501 (64%), Gaps = 17/501 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI Sbjct: 11 MSEKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIEL 70 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T K FVD + + R + D++D SYD FIRTT++ H + ++KK+ D+GDIY Sbjct: 71 KAEEAGITPKEFVDDVAADIRRIWDLMDTSYDKFIRTTDEDHEKQVQKIFKKLFDQGDIY 130 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y E+++ + ++ ADG+ + VQ +EE YFF++S Y D+L+ + Sbjct: 131 KGHYEGMYCTPCESFFTESQL---ADGKCPDCGRE-VQPAKEEAYFFKMSKYADRLIEHI 186 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 +HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+ Sbjct: 187 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVEFDPKHVVYVWLDALTNYI 246 Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 T GY + DG+ K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H + Sbjct: 247 TGIGY--DCDGNNTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPW 304 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L K+SKS GNV+ E+++ GVDA+RYF++ E+ DG + + +R+N++LA Sbjct: 305 LLQGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERLNSELA 364 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N +GNLV+R+VSM K + G + G E D + +V +++ M + A+ Sbjct: 365 NTLGNLVNRTVSMTNKYFAGTVCDKGVAEEVDADLKAVMESTPKKVEAKMDELRVADAIT 424 Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ +L ++Y D PW L K DR TVL+ ++ I A+LL++F+P + KI Sbjct: 425 EIFNLFKRCNKYIDETMPWVLAKDEAKKDRLETVLWNLIQGISAGAVLLESFMPSTSKKI 484 Query: 474 FDIL---FVADENRC-FQSLD 490 + L V D+ FQ LD Sbjct: 485 LEQLNDGHVTDKPEILFQRLD 505 >gi|199597844|ref|ZP_03211270.1| Methyonyl-tRNA synthetase [Lactobacillus rhamnosus HN001] gi|258509579|ref|YP_003172330.1| methionyl-tRNA synthetase/ protein secretion chaperonin, CsaA [Lactobacillus rhamnosus GG] gi|199591280|gb|EDY99360.1| Methyonyl-tRNA synthetase [Lactobacillus rhamnosus HN001] gi|257149506|emb|CAR88479.1| methionyl-tRNA synthetase / protein secretion chaperonin, CsaA [Lactobacillus rhamnosus GG] gi|259650846|dbj|BAI43008.1| methionyl-tRNA synthetase [Lactobacillus rhamnosus GG] Length = 660 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 211/521 (40%), Positives = 323/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + Y++T I YP+ + HIG+AY I ADVLAR+ RL G DV F TGTDEHG KI + Sbjct: 1 MASKPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A GVT + +VD + + + +L+I+ D FIRTT+K H + + + +++ +GD+Y Sbjct: 61 KADKLGVTPQAYVDGMAAQIKQLWKMLEITNDKFIRTTDKEHVEAVQEIVERLIKQGDVY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVY+ DG+ + + VQ + E YFF++S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLSEVYRDKDGKVIGGKAPSGHEVQLVHEPSYFFKMSKYTD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ HP+F+ P R+ E+I+ F+K GL+DL++SR +F+WG++IP DP++++YVW+D Sbjct: 181 RLLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVD 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T GY N K+WPA++ +IGK+I+RFH IYWP L++ +LPLPKK+++H Sbjct: 241 ALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALDLPLPKKIYAH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+++ K K+SKS GN I P ++E G+DALRY+L+R I G DG + + R+N D Sbjct: 301 GWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG++P T D+ + V L + + M Sbjct: 361 LANDLGNLLNRTIAMINKYEDGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSD 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL QV +VS ++Y D +PW+L K D+ +V+ E +R +A+L+Q + Sbjct: 421 ALDQVWKIVSRANKYIDETEPWKLAKDPAKKDQLDSVMAHLAESLRLIALLIQPVMTHAP 480 Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 +IF L + EN + + L G + + PIFPR Sbjct: 481 VQIFGQLGLDHENEDHKVVKWGALPAGAKVVEQGTPIFPRL 521 >gi|77408311|ref|ZP_00785053.1| methionyl-tRNA synthetase [Streptococcus agalactiae COH1] gi|77173074|gb|EAO76201.1| methionyl-tRNA synthetase [Streptococcus agalactiae COH1] Length = 665 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 208/520 (40%), Positives = 328/520 (63%), Gaps = 10/520 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ R+ G DV + TG DEHGQKI + Sbjct: 1 MTEKKSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + + + + ++LDISYD FIRTT+ H + +++++ +GDIY Sbjct: 61 KAEEAGITPQEYVDGMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 Y+GWYS+ DE ++ + EVY+ +G + V+ + EE YFFR+S Y D Sbjct: 121 LDEYTGWYSVSDEEFFTESQLAEVYRDENGNMIGGVAPSGHEVEKVSEESYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L +YY HPEFI P R NE++ +F++ GL+DL++SR T+ WG+++P +P++++YVWID Sbjct: 181 RLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSNPKHVIYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY++ GY + D S+ KFWPAD+H+IGKDILRFH+IYWP L++ +LPLPK++ + Sbjct: 241 ALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMALDLPLPKRLVA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + + K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 +LAN +GNL++R+++M+ K +DG +P T+ D + SV + ++ + M+ R Sbjct: 361 ELANDLGNLLNRTIAMVNKYFDGEVPRFAVATDFDADLASVATDSIENYHKQMEAVDFPR 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL V +L+S ++Y D PW L K T+ D+ + V+ V +R +A L+Q F+ + + Sbjct: 421 ALEAVWNLISRTNKYIDETAPWVLAKDETDRDKLAAVMSHLVASLRVVAHLIQPFMMETS 480 Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + I + L + + L G + PIFPR Sbjct: 481 DAIMEQLGLGATFDLEKLTFADLPEGVRVVAKGSPIFPRL 520 >gi|153816358|ref|ZP_01969026.1| hypothetical protein RUMTOR_02610 [Ruminococcus torques ATCC 27756] gi|317501006|ref|ZP_07959214.1| methionine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] gi|145846319|gb|EDK23237.1| hypothetical protein RUMTOR_02610 [Ruminococcus torques ATCC 27756] gi|316897584|gb|EFV19647.1| methionine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] Length = 633 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 209/482 (43%), Positives = 312/482 (64%), Gaps = 9/482 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI Sbjct: 1 MSEKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIEL 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AGVT K FVD S + + D++D SYD FIRTT++ H + ++KK+ D+GDIY Sbjct: 61 KAEEAGVTPKEFVDGVSAEIKKIWDLMDTSYDKFIRTTDEDHEKQVQKIFKKLYDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y E+++ + ++ DG+ + VQ +EE YFF++S Y D+L+ + Sbjct: 121 KGHYEGMYCTPCESFFTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADRLIEHI 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 +HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + D ++++YVW+DALTNY+ Sbjct: 177 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYI 236 Query: 240 TTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 T GY + D ++ AK WPADLH+IGKDI+RFH IYWP FL++ LPLPK+VF H ++L Sbjct: 237 TGIGYDADGDSTEQYAKLWPADLHLIGKDIIRFHTIYWPIFLMALGLPLPKQVFGHPWLL 296 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 K+SKS GNV+ E+++ GVDA+RYF++ E+ DG + + +R+N+DLAN Sbjct: 297 QGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSDLANT 356 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 +GNLV+R+VSM K + G++ GA + D + +V + + M + A+ ++ Sbjct: 357 LGNLVNRTVSMTNKYFGGVVSDKGAAEDVDADLKAVIDNTPKAVDAKMDGLRVADAITEI 416 Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 +L ++Y D PW L K DR TVL+ ++ I A LL++F+P + KI D Sbjct: 417 FNLFKRCNKYIDETMPWALAKDEEKKDRLETVLWNLIQGISAGARLLESFMPSTSKKILD 476 Query: 476 IL 477 L Sbjct: 477 QL 478 >gi|299143372|ref|ZP_07036452.1| methionine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517857|gb|EFI41596.1| methionine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 657 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 212/511 (41%), Positives = 319/511 (62%), Gaps = 9/511 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +K Y++T I YP+ HIGH Y + AD + ++ +L G DV FTTGTDEHGQKI + A Sbjct: 2 EKKYYLTTPIYYPSGNLHIGHTYCTVAADCIKKYKKLQGYDVFFTTGTDEHGQKIQQKAL 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ K +VD + +++ +DI YD FIR+T+ H + ++KK+ +KG+IYK Sbjct: 62 EEGLEPKEYVDNIVVSIKELWSKMDIDYDAFIRSTDPEHEKNVQEIFKKLYEKGEIYKSQ 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + EA++ + ++ DG +EE YFF+LS Y+D+LL YYE H Sbjct: 122 YEGHYCTQCEAFWTESQL---KDGDKCPDCGRETHIEKEESYFFKLSKYRDRLLKYYEDH 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI P+ R+NE+I+ F+K GL DLS++R +FDWG+K+P D ++I+YVWIDAL+ YL+ Sbjct: 179 PDFIEPVSRKNEMINNFLKDGLDDLSVTRSSFDWGVKVPFDDKHIVYVWIDALSCYLSAI 238 Query: 243 GYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY D K KFWPAD+H++GK+I+RFH I WPA L++ +LPLP+K+F HG+IL + Sbjct: 239 GY--GTDNEKFEKFWPADVHLVGKEIIRFHTIIWPALLMALDLPLPEKIFGHGWILFDND 296 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNVI P +I+ GVDAL+YFL+RE + G DG ++++ +R+N+DLAN +GNL Sbjct: 297 KMSKSKGNVIYPEPIIKLYGVDALKYFLLREFSFGSDGSFNREKFMQRLNSDLANDLGNL 356 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 VSR +SMI K DG IP+ E DE ++++ + + ++ M++ AL ++ +L+ Sbjct: 357 VSRIISMIEKYNDGYIPSATVSEEVDEDLINIATTTMTKVDSAMEHFEFSVALEEIWNLI 416 Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 ++Y D PW L K +N R +VLY E +R ++L+ F+ + + +I L V Sbjct: 417 RRCNKYVDETTPWILAKDESNKPRLDSVLYNLAEALRITSVLINPFISETSREIRKSLRV 476 Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 E + S L K +FPR Sbjct: 477 KGEVKWEDSAIWGLTEAGEHVKNVGVLFPRL 507 >gi|294793443|ref|ZP_06758580.1| methionine--tRNA ligase [Veillonella sp. 3_1_44] gi|294455013|gb|EFG23385.1| methionine--tRNA ligase [Veillonella sp. 3_1_44] Length = 648 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 210/515 (40%), Positives = 317/515 (61%), Gaps = 13/515 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+A+ HIGH Y +AD +ARF RL G DV F TG+DEHGQKI +AA+ Sbjct: 5 KKTYYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAAE 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + F+ + + + IS DDFIRTT++RH + L+ K +KGDIYK Sbjct: 65 AQGITPLEYTTNIVNGFKALWEKMHISNDDFIRTTDERHEKVVQALFTKAYEKGDIYKAE 124 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY DE ++ + ++ G + + PV+ ++EE YFF+L Y D+ L + E + Sbjct: 125 YEGWYCTPDETFWTEQKL--GPNHTCPDCGR-PVERVKEESYFFKLGKYTDQWLKFIEEN 181 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNE+I FVK GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++ Sbjct: 182 PDFIQPESRRNEMIQFVKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISALS 241 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 D K+WPADLH++GK+I+RFH I WP L+S LPLPKKVF HG+++ G K+ Sbjct: 242 PFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNVIDPI +I+ G D+LRY+L+ EI G DG + ++NADL+N +GNL++ Sbjct: 302 SKSLGNVIDPIPLIDTYGADSLRYYLLSEITLGNDGNFTLPNFVTKINADLSNDLGNLLN 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+++MI K + G+I + D + ++ + ++ M+N +++A+ V S + Sbjct: 362 RTIAMIEKYHGGVITKCDDMDDLDRDVSTLAVQTAKDFEAAMENMELNKAIKTVWSFIGR 421 Query: 424 VDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +++Y D PW L K+ + R + +Y E +R +AIL+ +P A KI++ L + Sbjct: 422 MNKYIDETMPWVLAKSEDAHDKARLQSAMYHLAEALRIIAILVSPVIPVGAPKIWEQLGL 481 Query: 480 ADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510 +L+ G + T +PI+PRF Sbjct: 482 TGFEAA--TLEDAKTWGLLATGTKVVKGEPIYPRF 514 >gi|331089040|ref|ZP_08337946.1| hypothetical protein HMPREF1025_01529 [Lachnospiraceae bacterium 3_1_46FAA] gi|330406240|gb|EGG85759.1| hypothetical protein HMPREF1025_01529 [Lachnospiraceae bacterium 3_1_46FAA] Length = 633 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 209/482 (43%), Positives = 312/482 (64%), Gaps = 9/482 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI Sbjct: 1 MSEKQKYYITTAIAYTSGKPHIGNTYEIVLADAVARYKRSQGYDVFFQTGTDEHGQKIEL 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AGVT K FVD S + + D++D SYD FIRTT++ H + ++KK+ D+GDIY Sbjct: 61 KAEEAGVTPKEFVDGVSAEIKKIWDLMDTSYDKFIRTTDEDHEKQVQKIFKKLYDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y E+++ + ++ DG+ + VQ +EE YFF++S Y D+L+ + Sbjct: 121 KGHYEGMYCTPCESFFTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADRLIEHI 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 +HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + D ++++YVW+DALTNY+ Sbjct: 177 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYI 236 Query: 240 TTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 T GY + D ++ AK WPADLH+IGKDI+RFH IYWP FL++ LPLPK+VF H ++L Sbjct: 237 TGIGYDADGDSTEQYAKLWPADLHLIGKDIIRFHTIYWPIFLMALGLPLPKQVFGHPWLL 296 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 K+SKS GNV+ E+++ GVDA+RYF++ E+ DG + + +R+N+DLAN Sbjct: 297 QGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSDLANT 356 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 +GNLV+R+VSM K + G++ GA + D + +V + + M + A+ ++ Sbjct: 357 LGNLVNRTVSMTNKYFGGVVSDKGAAEDVDADLKAVIDNTPKAVDAKMDGLRVADAITEI 416 Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 +L ++Y D PW L K DR TVL+ ++ I A LL++F+P + KI D Sbjct: 417 FNLFKRCNKYIDETMPWALAKDEEKKDRLETVLWNLIQGISAGARLLESFMPSTSKKILD 476 Query: 476 IL 477 L Sbjct: 477 QL 478 >gi|191639512|ref|YP_001988678.1| Methionyl-tRNA synthetase [Lactobacillus casei BL23] gi|190713814|emb|CAQ67820.1| Methionyl-tRNA synthetase [Lactobacillus casei BL23] gi|327383610|gb|AEA55086.1| Methionyl-tRNA synthetase [Lactobacillus casei LC2W] gi|327386801|gb|AEA58275.1| Methionyl-tRNA synthetase [Lactobacillus casei BD-II] Length = 660 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 211/521 (40%), Positives = 319/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + Y++T I YP+ + HIG+AY I ADVLAR+ RL G DV F TGTDEHG KI + Sbjct: 1 MASKPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A GVT + +VD + + + +L+I+ D FIRTT+K H + + + +++ +GD+Y Sbjct: 61 KADKLGVTPQAYVDGMATQIKQLWKMLEITNDKFIRTTDKEHVEAVQTIVERLIKQGDVY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVY+ DG + + VQ + E YFF++S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLSEVYRDQDGNVTGGKAPSGHEVQLVHEPSYFFKMSKYTD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ HP+F+ P R+ E+I+ F+K GL+DL++SR +F+WG++IP DP++++YVW+D Sbjct: 181 RLLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVD 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T GY N K+WPA++ +IGK+I+RFH IYWP L++ LPLPKK+++H Sbjct: 241 ALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALGLPLPKKIYAH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+++ K K+SKS GN I P ++E G+DALRY+L+R I G DG + + R+N D Sbjct: 301 GWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG++P T D+ + V L + + M Sbjct: 361 LANDLGNLLNRTIAMINKYEDGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSD 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL QV +VS ++Y D +PW L K D+ V+ E +R +A+L+Q + Sbjct: 421 ALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHLAESLRLIALLIQPVMTHAP 480 Query: 471 NKIFDILFVADENRCFQSLDQRLKP-GFMLHKTFDPIFPRF 510 +IF L + EN + + P G + + PIFPR Sbjct: 481 LQIFGQLGLDHENDDHKLVQWGALPAGVKVVEQGTPIFPRL 521 >gi|317133508|ref|YP_004092822.1| methionyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] gi|315471487|gb|ADU28091.1| methionyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] Length = 651 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 201/473 (42%), Positives = 300/473 (63%), Gaps = 7/473 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I Y + HIGH Y + D +ARF R+ G DVLF TGTDEHGQKI + A+ Sbjct: 2 KKTYYITTPIYYTSGTLHIGHGYTTVAGDAMARFRRMQGYDVLFLTGTDEHGQKIEERAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T K +VD+ + + +LDISYD FIRTT+ H + +++++ ++GDIYKG Sbjct: 62 AAGKTPKAYVDEIVAEIKSLWKLLDISYDRFIRTTDAAHEKVVQQIFRRLYEQGDIYKGK 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+++ + ++ DG+ + V+ EEE YFFRLS Y D+L+ +Y++H Sbjct: 122 YEGWYCRPCESFWTETQL---KDGKCPDCGRE-VKRAEEEAYFFRLSKYADRLVEHYKAH 177 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEFI P R +E+++ F+K GL+DL +SR +F WGI + DP +++YVWIDAL+NY+T Sbjct: 178 PEFISPPSRMHEMVNNFIKPGLEDLCVSRTSFTWGIPVDFDPGHVIYVWIDALSNYITAL 237 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY D K+WPAD+H++ K+I+RFH I WPA L++ PLPK+VF HG++L G+K Sbjct: 238 GYGTENDADYRKYWPADVHLMAKEIVRFHTIIWPAILMALGEPLPKRVFGHGWLLLGGDK 297 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ + + VDA+RYFL+REI G D + + L R+NADLAN +GNLV Sbjct: 298 MSKSKGNVVDPVLLCKRYSVDAIRYFLLREIPFGADSTFSTEALLGRINADLANDLGNLV 357 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+V+M+ K + G++P G D+ + ++ + + + +M ALA + VS Sbjct: 358 SRTVAMVEKYFGGVLPAAGESGPFDDKLRALAAETAKAVEADMDAFQFSNALADIWKFVS 417 Query: 423 EVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++Y D PW L K D R + VL E +R +++ + F+P A +I Sbjct: 418 RTNKYIDETAPWILAKNEADKPRLAQVLRNLCESVRLISVCIAPFMPATAAEI 470 >gi|154506267|ref|ZP_02043005.1| hypothetical protein RUMGNA_03809 [Ruminococcus gnavus ATCC 29149] gi|153793455|gb|EDN75875.1| hypothetical protein RUMGNA_03809 [Ruminococcus gnavus ATCC 29149] Length = 639 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 211/490 (43%), Positives = 314/490 (64%), Gaps = 19/490 (3%) Query: 1 MKEREKL------YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEH 54 MKER ++ YI+TAIAY + +PHIG+ YE+I+AD +AR+ R G DV F TGTDEH Sbjct: 1 MKERREMADKKPYYITTAIAYTSGKPHIGNTYEIILADAIARYKRSQGYDVFFQTGTDEH 60 Query: 55 GQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKIS 114 GQKI A+ AGVT K FVD S + + D++D SYD FIRTT++ H + ++KK+ Sbjct: 61 GQKIELKAEEAGVTPKEFVDNVSGEIKKIWDLMDTSYDKFIRTTDEDHEKQVQKIFKKLY 120 Query: 115 DKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 D+GDIYKG Y G Y E+++ + ++ DG+ + VQ +EE YFF++S Y D Sbjct: 121 DQGDIYKGHYEGMYCTPCESFFTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYAD 176 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ + +HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP+++ YVW+D Sbjct: 177 RLIEHINTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVTYVWLD 236 Query: 234 ALTNYLTTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289 ALTNY+T GY + DG+ K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+ Sbjct: 237 ALTNYITGIGY--DCDGNSTEQFHKLWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQ 294 Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 VF H ++L K+SKS GNV+ E+++ GVDA+RYF++ E+ DG + + +R Sbjct: 295 VFGHPWLLQGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVER 354 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 +N+DLAN +GNLV+R+VSM K + G + G E D + +V + + + M+ Sbjct: 355 MNSDLANTLGNLVNRTVSMTNKYFSGTVTDKGVAEEVDADLKAVTESTPKAVEDKMEELR 414 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVP 467 + A+ ++ +L ++Y D PW L K DR TVL+ ++ I + A LL++F+P Sbjct: 415 VADAMTEIFNLFKRCNKYIDETMPWVLAKDEAKKDRLETVLWNLIQSISRGAELLESFMP 474 Query: 468 KLANKIFDIL 477 + KI + L Sbjct: 475 STSKKILEQL 484 >gi|319745565|gb|EFV97867.1| methionine--tRNA ligase [Streptococcus agalactiae ATCC 13813] Length = 671 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 207/517 (40%), Positives = 327/517 (63%), Gaps = 10/517 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG AY I DVLAR+ R+ G DV + TG DEHGQKI + A+ Sbjct: 10 KKSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQKAE 69 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T + +VD + + + + ++LDISYD FIRTT+ H + +++++ +GDIY G Sbjct: 70 EAGITPQEYVDGMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIYLGE 129 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 Y+GWYS+ DE ++ + EVY+ +G + V+ + EE YFFR+S Y D+L Sbjct: 130 YTGWYSVSDEEFFTESQLAEVYRDENGNMIGGVAPSGHEVEKVSEESYFFRMSKYADRLK 189 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 +YY HPEFI P R NE++ +F++ GL+DL++SR T+ WG+++P +P++++YVWIDAL Sbjct: 190 AYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSNPKHVIYVWIDALM 249 Query: 237 NYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY++ GY + D S+ KFWPAD+H+IGKDILRFH+IYWP L++ +LPLPK++ +HG+ Sbjct: 250 NYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMALDLPLPKRLVAHGW 309 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + + K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 310 FVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 369 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N +GNL++R+++M+ K +DG +P T+ D + SV + ++ + M+ RAL Sbjct: 370 NDLGNLLNRTIAMVNKYFDGEVPRFAVATDFDADLASVATDSIENYHKQMEAVDFPRALE 429 Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 V +L+S ++Y D PW L K T+ D+ + V+ V +R +A L+Q F+ + ++ I Sbjct: 430 AVWNLISRTNKYIDETAPWVLAKDETDRDKLAAVMSHLVASLRVVAHLIQPFMMETSDAI 489 Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + L + + L G + PIFPR Sbjct: 490 MEQLGLGTTFDLEKLTFAGLPEGVRVVAKGSPIFPRL 526 >gi|116496032|ref|YP_807766.1| methyonyl-tRNA synthetase [Lactobacillus casei ATCC 334] gi|116106182|gb|ABJ71324.1| methionyl-tRNA synthetase [Lactobacillus casei ATCC 334] Length = 660 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 211/521 (40%), Positives = 319/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + Y++T I YP+ + HIG+AY I ADVLAR+ RL G DV F TGTDEHG KI + Sbjct: 1 MASKPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A GVT + +VD + + + +L+I+ D FIRTT+K H + + + +++ +GD+Y Sbjct: 61 KADKLGVTPQAYVDGMATQIKQLWKMLEITNDKFIRTTDKEHVEAVQTIVERLIKQGDVY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVY+ DG + + VQ + E YFF++S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLSEVYRDQDGNVTGGKAPSGHEVQLVHEPSYFFKMSKYTD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ HP+F+ P R+ E+I+ F+K GL+DL++SR +F+WG++IP DP++++YVW+D Sbjct: 181 RLLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVD 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T GY N K+WPA++ +IGK+I+RFH IYWP L++ LPLPKK+++H Sbjct: 241 ALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALGLPLPKKIYAH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+++ K K+SKS GN I P ++E G+DALRY+L+R I G DG + + R+N D Sbjct: 301 GWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG++P T D+ + V L + + M Sbjct: 361 LANDLGNLLNRTIAMINKYEDGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSD 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL QV +VS ++Y D +PW L K D+ V+ E +R +A+L+Q + Sbjct: 421 ALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHLAESLRLIALLIQPVMTHAP 480 Query: 471 NKIFDILFVADENRCFQSLDQRLKP-GFMLHKTFDPIFPRF 510 +IF L + EN + + P G + + PIFPR Sbjct: 481 LQIFGQLGLDHENDDHKLVQWGALPAGVKVVEQGTPIFPRL 521 >gi|323340524|ref|ZP_08080779.1| methionine--tRNA ligase [Lactobacillus ruminis ATCC 25644] gi|323092068|gb|EFZ34685.1| methionine--tRNA ligase [Lactobacillus ruminis ATCC 25644] Length = 678 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 210/521 (40%), Positives = 319/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG++Y I DVLAR+ RL G DV F TGTDEHG KI + Sbjct: 3 MAEKPTFYITTPIYYPSGKLHIGNSYTTIACDVLARYKRLQGFDVFFLTGTDEHGLKIEE 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ +T + +VD + + + + L+IS D FIRTT+ H +++K+ KGDIY Sbjct: 63 KAEELNMTPQEYVDSMAESIKKLWKQLEISNDKFIRTTDDYHVKAVEQIFEKLLKKGDIY 122 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVY+ +G+ + + V+ +EE+ YFF++S Y D Sbjct: 123 LGKYKGWYSVSDEEYFTESQLAEVYRDENGKMIGGKAPSGHEVELVEEDCYFFKMSKYAD 182 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YY HP+FI+P R+NE+++ F+ GL+DL+L+R +F+WG+ +P +P++++YVWID Sbjct: 183 RLVEYYNEHPDFIMPETRKNEMLNNFINPGLEDLALTRTSFNWGVPVPSNPKHVIYVWID 242 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T GY + D ++WPAD+H++GK+I+RFH IYWP L++ +LPLPK V H Sbjct: 243 ALCNYITALGYGSDDDSLFNRYWPADVHMVGKEIVRFHTIYWPIILMALDLPLPKHVLGH 302 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + RVN D Sbjct: 303 GWLLMKDGKMSKSKGNVVYPEMIVERYGLDALRYYLIRAVPYGNDGIFTPEDFVNRVNYD 362 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K G +P T D+S+ L+ ++ Sbjct: 363 LANDLGNLLNRTVAMINKYRGGNVPELVSGVTAFDKSLEDAFEEALKGYESELEQAHFTV 422 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL ++ VS ++Y D +PW L K + + +VL +R +AILLQ + Sbjct: 423 ALEKLWKFVSRTNKYIDETEPWALAKDESKANELDSVLAHLAASLRVIAILLQPVMTHAP 482 Query: 471 NKIFDILFVADENRCFQSLDQRLKP-GFMLHKTFDPIFPRF 510 K+F+ L + +EN + LD P G + + PIFPR Sbjct: 483 KKMFEQLGLPEENMDIKGLDFFAFPSGIKVVEKGTPIFPRL 523 >gi|312880384|ref|ZP_07740184.1| methionyl-tRNA synthetase [Aminomonas paucivorans DSM 12260] gi|310783675|gb|EFQ24073.1| methionyl-tRNA synthetase [Aminomonas paucivorans DSM 12260] Length = 648 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 210/479 (43%), Positives = 292/479 (60%), Gaps = 9/479 (1%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++R YI+T I Y N PHIGHAY I ADVLAR HR+ G F TGTDEHGQKI +A Sbjct: 3 EQRTPFYITTPIYYVNDVPHIGHAYTTIAADVLARHHRMLGDPTTFLTGTDEHGQKIQQA 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A G+T DQ NFR + VL+I+ DDFIRTTE RH + ++ + +KGDIY Sbjct: 63 AAAKGLTALQLADQTVENFRRLWKVLNITNDDFIRTTEPRHEKVVQHIFSTLLEKGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 G Y GWY + E Y + ++ +G P+Q M E+ YFFR+S Y+ LL YYE Sbjct: 123 GSYEGWYCVPCETYVPEAQM---GEGNTCPDCGRPLQKMTEQSYFFRMSKYEQPLLDYYE 179 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 PE ILP R NE++SF++ GLKD S+SR T WG+ +P D Q+++YVW DAL NYL+ Sbjct: 180 GLPEAILPRTRANEILSFLRGGLKDQSISRTTMKWGVPVPGDEQHVVYVWFDALINYLSA 239 Query: 242 TGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GY P+ K FWP H++GKDI+RFH++ WPA LL+ L PK+VF+HG+ + Sbjct: 240 LGY---PEAGKPWETFWPVAHHLVGKDIIRFHSVVWPALLLALGLQPPKRVFAHGWWTVE 296 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G+K+SKS GNV+DP E+ E GVD RYFL+RE+ G DG + + L +R NADLAN +G Sbjct: 297 GDKMSKSKGNVVDPFEMAERYGVDVFRYFLLREVPFGLDGDFSELALVQRSNADLANDLG 356 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL++R++ M+ K G +P+ D + + R +E+ ++ AL + + Sbjct: 357 NLLNRTLQMVEKYCGGQVPSAVHPEALDRELEILAGRTAEEMDRLLERFAFDEALKALWA 416 Query: 420 LVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + ++Y D PW L K+ N +R TVL E +RQ A+L F+P+ A +++D L Sbjct: 417 FLGRSNKYIDENLPWNLAKEGNQERLDTVLRTLFEALRQAALLSAPFLPETAQRMWDQL 475 >gi|303231911|ref|ZP_07318620.1| methionine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] gi|302513440|gb|EFL55473.1| methionine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] Length = 649 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 211/514 (41%), Positives = 314/514 (61%), Gaps = 11/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+A+ HIGH Y +AD +ARF RL G DV F TG+DEHGQKI +AA+ Sbjct: 5 KKTFYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAAE 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + F+ + + + IS DDFIRTT+ RH + L+ K +KGDIYK Sbjct: 65 AQGITPLEYTTNIVNGFKALWEKMHISNDDFIRTTDARHEKVVQELFTKAYEKGDIYKAE 124 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E+++ + ++ + PV+ ++EE YFF+L Y D+ L + E + Sbjct: 125 YEGWYCTPCESFWTEQKL---GENHTCPDCGRPVERVKEESYFFKLGKYTDQWLKFIEEN 181 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNE+I FVK GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++ Sbjct: 182 PDFIQPESRRNEMIQFVKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISALS 241 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 D KFWPADLH++GK+I+RFH I WP L+S LPLPKKVF HG+++ G K+ Sbjct: 242 PFDGDGELYKKFWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNVIDP +I+ G D+LRY+L+ EI G DG + ++NADL+N +GNL++ Sbjct: 302 SKSLGNVIDPNPLIDIYGADSLRYYLLSEITLGHDGNFTLPNFVTKINADLSNDLGNLLN 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+++MI K + G+I + D+ I S+ + + + M+ +++AL V + +S Sbjct: 362 RTIAMIEKYHGGIITKTDDVDDLDKEISSLAEQTVADFESQMEAMELNKALKTVWAFISR 421 Query: 424 VDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +++Y D PW L K++ + R +V+Y E +R +A+L+ +P A KI++ L + Sbjct: 422 MNKYIDETMPWVLAKSSDEADVHRLKSVMYHLAESLRIIAVLVSPVIPVGAPKIWEQLGL 481 Query: 480 ADENRCFQSLDQRLKPGFMLHKTF---DPIFPRF 510 Q D R G +PI+PRF Sbjct: 482 GGFEDV-QLDDVRTWGGIQTGTKVVKGEPIYPRF 514 >gi|218281348|ref|ZP_03487826.1| hypothetical protein EUBIFOR_00391 [Eubacterium biforme DSM 3989] gi|218217440|gb|EEC90978.1| hypothetical protein EUBIFOR_00391 [Eubacterium biforme DSM 3989] Length = 641 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 211/517 (40%), Positives = 327/517 (63%), Gaps = 18/517 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +++E Y++TAIAY + +PHIG+ YE+I++D +ARF R G DV F TGTDEHG KI + Sbjct: 3 QKKEPFYLTTAIAYTSGRPHIGNTYEIILSDAIARFKRAQGYDVFFQTGTDEHGVKIEEK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ AGVT + FVD + + D+++ SYD F+RTT+ H + ++K++ D+GDIYK Sbjct: 63 AKAAGVTPQEFVDGVAAQIKSNWDLMNTSYDYFVRTTDDYHVKEVQSIFKRLYDQGDIYK 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 G Y GWY E+++ + ++ G PV+ +EE YFF + Y D+L+ Y E Sbjct: 123 GTYEGWYCTPCESFWTESQLVDGCCPDC----GRPVKKAKEEAYFFNMQKYADRLIKYIE 178 Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 HP+FI P R+NE+++ F++ GL+DL +SR +F WG+ + DP++++YVWIDAL+NY+T Sbjct: 179 DHPDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFSWGVPVDFDPKHVVYVWIDALSNYIT 238 Query: 241 TTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 T GY N + + K+WPA H+IGKDILRFH IYWP L++ +LPLPKKVF H ++L Sbjct: 239 TLGYHANGESDEKFKKYWPA-THIIGKDILRFHTIYWPIILMALDLPLPKKVFGHPWLLT 297 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 +K+SKS GNVI +++E GVDA+RY+ + E+ +DG D + +R+N+DLAN + Sbjct: 298 GSDKMSKSKGNVIYAEDLVEHFGVDAVRYYCLHEMPFAQDGTITWDLVIERINSDLANIL 357 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNLVSR+++M K + G++ P DE + + +++ M+ + AL ++ Sbjct: 358 GNLVSRTIAMSNKYFGGLVTNPNVCEAVDEELKACALETKKKVEAKMEELRVGDALDEIF 417 Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 +L+ ++Y D PW L K + DR +TVLY +E IR A+LL +F+P+ A K+F Sbjct: 418 TLLRRTNKYIDETMPWVLAKDESKQDRLATVLYNLLESIRISAVLLHSFLPETAEKMFAY 477 Query: 477 LF--VADENRC--FQSLDQRLKPGFMLHKTFDPIFPR 509 L V D + C F +L+ + + + +P+F R Sbjct: 478 LNTKVTDLDSCDSFGNLETDIH----VVEKCEPLFAR 510 >gi|313888600|ref|ZP_07822265.1| methionine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845329|gb|EFR32725.1| methionine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 651 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 218/519 (42%), Positives = 323/519 (62%), Gaps = 25/519 (4%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K Y++T I YP+ HIGH Y + D + RF + G DV FTTGTDEHGQKI A+ Sbjct: 4 KKFYVTTPIYYPSDNLHIGHTYCTVAVDCVKRFKTMQGYDVFFTTGTDEHGQKIEDKAKE 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ K +VD +N + + +++DI YD F+R+T++ H + +++K+ DKGDIYKG Y Sbjct: 64 FGMEPKAYVDGIVKNIKKLWEIMDIDYDYFVRSTDEDHEKDVQEIFQKLYDKGDIYKGEY 123 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G+Y E+++ + ++ +G + EE YFFRLS Y+D+LL YYE HP Sbjct: 124 KGYYCKPCESFWTEAQL---GEGHTCPDCGRSTELTNEESYFFRLSKYKDRLLKYYEDHP 180 Query: 185 EFILPIERRNEVISFV---KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 EFI P R+NE++ +SGL+DLS+SR TFDWG+K+P DP++++YVWIDALT YLT Sbjct: 181 EFIEPAFRKNEMVKNFFEGESGLEDLSVSRSTFDWGVKVPFDPKHVVYVWIDALTCYLTA 240 Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY D K +WPAD+H +GK+I+RFH I WPA L++ +LPLP KVF HG+IL Sbjct: 241 IGY--GTDKEKFNDYWPADVHFVGKEIIRFHVIIWPAILMALDLPLPDKVFGHGWILFDN 298 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKS GNVI P +I+ GVDAL+YFL+RE + G DG ++ + +R+N+DLAN +GN Sbjct: 299 DKMSKSKGNVIYPEPIIKLYGVDALKYFLLREFSFGSDGSFNIEKFMQRLNSDLANDLGN 358 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+SR+VSMI K DG+I G E D+ + ++ V+ + + M++ AL + L Sbjct: 359 LLSRTVSMIGKYNDGIIKDMGVREEVDDDLENLAVSVVDNVEKAMEHYEFSVALEAIWKL 418 Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI----- 473 + ++Y D +PW+L K DR +TVLY E +R +++L+ F+ + + KI Sbjct: 419 IRRTNKYVDETEPWKLAKDEDKKDRLNTVLYNLAESLRIVSVLIYPFIKETSLKIREQLG 478 Query: 474 FDILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 D +++R F L D +++ G + IFPR Sbjct: 479 LDSKVSWEDSRVFGLLPDDTKVRKG-------EVIFPRL 510 >gi|269797679|ref|YP_003311579.1| methionyl-tRNA synthetase [Veillonella parvula DSM 2008] gi|269094308|gb|ACZ24299.1| methionyl-tRNA synthetase [Veillonella parvula DSM 2008] Length = 648 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 210/515 (40%), Positives = 318/515 (61%), Gaps = 13/515 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+A+ HIGH Y +AD +ARF RL G DV F TG+DEHGQKI +AA+ Sbjct: 5 KKTYYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAAE 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + F+ + + + IS DDFIRTT++RH + L+ K +KGDIYK Sbjct: 65 AQGITPLEYTTNIVNGFKALWEKMHISNDDFIRTTDERHEKVVQELFTKAYEKGDIYKAE 124 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY DE ++ + ++ G + + PV+ ++EE YFF+L Y D+ L + E + Sbjct: 125 YEGWYCTPDETFWTEQKL--GPNHTCPDCGR-PVERVKEESYFFKLGKYTDQWLKFIEEN 181 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNE+I FVK GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++ Sbjct: 182 PDFIQPESRRNEMIQFVKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISALS 241 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 D K+WPADLH++GK+I+RFH I WP L+S LPLPKKVF HG+++ G K+ Sbjct: 242 PFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNVIDPI +I+ G D+LRY+L+ EI G DG + ++NADL+N +GNL++ Sbjct: 302 SKSLGNVIDPIPLIDTYGADSLRYYLLSEITLGNDGNFTLPNFVTKINADLSNDLGNLLN 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+++MI K + G+I + D + ++ + +++ M+N +++A+ V S + Sbjct: 362 RTIAMIEKYHGGVITKCDDMDDLDRDVSTLAVQTVKDFEATMENMELNKAIKIVWSFIGR 421 Query: 424 VDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +++Y D PW L K+ + R + +Y E +R +AIL+ +P A KI++ L + Sbjct: 422 MNKYIDETMPWVLAKSEDAHDKVRLQSAMYHLAEALRIIAILVSPVIPVGAPKIWEQLGL 481 Query: 480 ADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510 +L+ G + T +PI+PRF Sbjct: 482 TGFEAA--TLEDAKTWGLLATGTKVVKGEPIYPRF 514 >gi|294791589|ref|ZP_06756737.1| methionine--tRNA ligase [Veillonella sp. 6_1_27] gi|294456819|gb|EFG25181.1| methionine--tRNA ligase [Veillonella sp. 6_1_27] Length = 648 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 210/515 (40%), Positives = 317/515 (61%), Gaps = 13/515 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+A+ HIGH Y +AD +ARF RL G DV F TG+DEHGQKI +AA+ Sbjct: 5 KKTYYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAAE 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + F+ + + + IS DDFIRTT++RH + L+ K +KGDIYK Sbjct: 65 AQGITPFEYTTNIVNGFKALWEKMHISNDDFIRTTDERHEKVVQALFTKAYEKGDIYKAE 124 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY DE ++ + ++ G + + PV+ ++EE YFF+L Y D+ L + E + Sbjct: 125 YEGWYCTPDETFWTEQKL--GPNHTCPDCGR-PVERVKEESYFFKLGKYTDQWLKFIEEN 181 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNE+I FVK GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++ Sbjct: 182 PDFIQPESRRNEMIQFVKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISALS 241 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 D K+WPADLH++GK+I+RFH I WP L+S LPLPKKVF HG+++ G K+ Sbjct: 242 PFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNVIDPI +I+ G D+LRY+L+ EI G DG + ++NADL+N +GNL++ Sbjct: 302 SKSLGNVIDPIPLIDTYGADSLRYYLLSEITLGNDGNFTLPNFVTKINADLSNDLGNLLN 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+++MI K + G+I + D + ++ + ++ M+N +++A+ V S + Sbjct: 362 RTIAMIEKYHGGVITKCDDMDDLDRDVSTLAVQTAKDFEAAMENMELNKAIKTVWSFIGR 421 Query: 424 VDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +++Y D PW L K+ + R + +Y E +R +AIL+ +P A KI++ L + Sbjct: 422 MNKYIDETMPWVLAKSEDAHDKVRLQSAMYHLAEALRIIAILVSPVIPVGAPKIWEQLGL 481 Query: 480 ADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510 +L+ G + T +PI+PRF Sbjct: 482 TGFEAA--TLEDAKTWGLLATGTKVVKGEPIYPRF 514 >gi|226325813|ref|ZP_03801331.1| hypothetical protein COPCOM_03626 [Coprococcus comes ATCC 27758] gi|225205937|gb|EEG88291.1| hypothetical protein COPCOM_03626 [Coprococcus comes ATCC 27758] Length = 634 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 212/499 (42%), Positives = 314/499 (62%), Gaps = 13/499 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ K YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI Sbjct: 1 MADKPKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIEL 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AGVT K FVD S + + D+++ SYD FIRTT+ H + ++KK+ D+GDIY Sbjct: 61 KAEEAGVTPKEFVDNVSGEIKRIWDLMNTSYDKFIRTTDDYHEKEVQKIFKKLYDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y E+++ + ++ DG+ + PVQ +EE YFF++S Y D+L+ Y Sbjct: 121 KGHYEGMYCTPCESFFTESQL---VDGKCPDCGR-PVQPAKEEAYFFKMSKYADRLIEYI 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 +HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+ Sbjct: 177 NTHPEFIQPVARKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYI 236 Query: 240 TTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 T GY + + + K WPADLH+IGKDI+RFH IYWP FL++ LPLPK+VF H ++L Sbjct: 237 TGIGYHCDGESDEMFNKNWPADLHLIGKDIIRFHTIYWPIFLMALGLPLPKQVFGHPWLL 296 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 K+SKS GNV+ E+++ GVDA+RYF++ E+ DG + + +R+N+DLAN Sbjct: 297 QGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERLNSDLANT 356 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 +GNLV+R++SM K + G + G E D + +V + + M + A+ ++ Sbjct: 357 LGNLVNRTISMTNKYFGGTVTDKGVAEEVDADLKAVTENTPKAVEAKMNELRVADAITEI 416 Query: 418 ISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 +L ++Y D PW L K DR TVL+ ++ I + A LL++F+P+ A KI Sbjct: 417 FNLFKRCNKYIDETMPWALAKEEDKKDRLETVLWNLIQSISEGAKLLESFMPETAEKILA 476 Query: 476 IL----FVADENRCFQSLD 490 L V FQ LD Sbjct: 477 QLGGGHVVEKPEILFQRLD 495 >gi|239630434|ref|ZP_04673465.1| methyonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067585|ref|YP_003789608.1| methyonyl-tRNA synthetase [Lactobacillus casei str. Zhang] gi|239526717|gb|EEQ65718.1| methyonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439992|gb|ADK19758.1| Methyonyl-tRNA synthetase [Lactobacillus casei str. Zhang] Length = 660 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 211/521 (40%), Positives = 319/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + Y++T I YP+ + HIG+AY I ADVLAR+ RL G DV F TGTDEHG KI + Sbjct: 1 MASKPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A GVT + +VD + + + +L+I+ D FIRTT+K H + + + +++ +GD+Y Sbjct: 61 KADKLGVTPQAYVDGMATQIKQLWKMLEITNDKFIRTTDKEHVEAVQTIVERLIKQGDVY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVY+ DG + + VQ + E YFF++S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLSEVYRDKDGNVTGGKAPSGHEVQLVHEPSYFFKMSKYTD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ HP+F+ P R+ E+I+ F+K GL+DL++SR +F+WG++IP DP++++YVW+D Sbjct: 181 RLLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVD 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T GY N K+WPA++ +IGK+I+RFH IYWP L++ LPLPKK+++H Sbjct: 241 ALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALGLPLPKKIYAH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+++ K K+SKS GN I P ++E G+DALRY+L+R I G DG + + R+N D Sbjct: 301 GWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG++P T D+ + V L + + M Sbjct: 361 LANDLGNLLNRTIAMINKYEDGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSD 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL QV +VS ++Y D +PW L K D+ V+ E +R +A+L+Q + Sbjct: 421 ALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHLAESLRLIALLIQPVMTHAP 480 Query: 471 NKIFDILFVADENRCFQSLDQRLKP-GFMLHKTFDPIFPRF 510 +IF L + EN + + P G + + PIFPR Sbjct: 481 LQIFGQLGLDHENDDHKLVQWGALPAGAKVVEQGTPIFPRL 521 >gi|42518288|ref|NP_964218.1| methionyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] gi|41582572|gb|AAS08184.1| methionyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] gi|329666598|gb|AEB92546.1| methionyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026] Length = 658 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 209/520 (40%), Positives = 324/520 (62%), Gaps = 10/520 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + IG+AY I AD + R+ + G D F TGTDEHG KI + Sbjct: 1 MAEKKTFYITTPIYYPSGKLTIGNAYTTIAADTMTRYKKSRGFDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD+ + +++D+ +LD+SYD FIRTT++ H + +++++ +GDIY Sbjct: 61 KAEAQGIKPQEFVDKMADSYKDLWKMLDVSYDRFIRTTDEDHVKAVQKIFERLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVYK DG + + V+ ++E YFFR+S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDDGNVIGGKAPSGHEVRLVKEPSYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ HP+FILP R E+++ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 181 RLLQYYKDHPDFILPHSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK++F H Sbjct: 241 ALSNYITALGYGSDNDALFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L + K+SKS GN + P +++ G+DALRY+L+R I G DG + + +RVN D Sbjct: 301 GWVLMRDGKMSKSKGNAVYPEMIVKRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+VSMI + DG + P E + ++ + + E ++ M + Sbjct: 361 LANDLGNLLNRTVSMINQYQDGQVAPVASEQDEFAKDLIKTANETIAEYQKQMDALHFSQ 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL V L+S ++Y D PW L K+ + S V+ E +R +AIL+ + + Sbjct: 421 ALDSVWKLISRANKYIDETTPWTLNKEGKSEELSKVMTNLAESLRLIAILIAPVMTQSPV 480 Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 K+F+ L + +N + LD + + PIFPR Sbjct: 481 KMFEQLGLDWKNDDQKKLDFGGFDWNIKVTEKPTPIFPRL 520 >gi|238925543|ref|YP_002939060.1| methionyl-tRNA synthetase [Eubacterium rectale ATCC 33656] gi|238877219|gb|ACR76926.1| methionyl-tRNA synthetase [Eubacterium rectale ATCC 33656] Length = 673 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 214/500 (42%), Positives = 323/500 (64%), Gaps = 22/500 (4%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TAIAY + +PHIG+ YE+I+AD +AR+ R +G DV F TGTDEHGQKI + A+ AG++ Sbjct: 1 MTTAIAYTSGKPHIGNTYEIILADAIARYKRAEGYDVYFQTGTDEHGQKIQEKAEAAGIS 60 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 K +VDQ S + + D+++ SYD+F+RTT++ H + ++KK+ D+GDIYKG Y G Y Sbjct: 61 PKEYVDQISGEVKRIWDLVNSSYDNFVRTTDEDHEKCVKKIFKKLYDQGDIYKGSYEGLY 120 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 E+++ + ++ DG+ + VQ +EE YFF++S Y D+L+ Y +HP+FI Sbjct: 121 CTPCESFWTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADRLIDYINTHPDFIQ 176 Query: 189 PIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 P+ R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+T GY + Sbjct: 177 PVSRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDPKHVVYVWLDALTNYITKIGY--D 234 Query: 248 PDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 PDGS F WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L G+K+S Sbjct: 235 PDGSSELFKKNWPADLHLIGKDIVRFHTIYWPIFLMALDLPLPKQVFGHPWLLQGGDKMS 294 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNVI +++ GVDA RYF++ E+ DG D + +R N+DLAN +GNLV+R Sbjct: 295 KSKGNVIYADDMVRLFGVDATRYFVLHEMPFENDGIITWDLVIERFNSDLANILGNLVNR 354 Query: 365 SVSMILKDYDGMIPTPGAFTESDESIL-----SVCSRVLQEIRENMQNQLIHRALAQVIS 419 +VSM K +DG++ + GA ++D++ + +V + ++ + M+ + A+ +V + Sbjct: 355 TVSMSNKYFDGIVKSTGATGDADQTAIDADLKAVVTGTRDKVAKKMEGLRVADAITEVFA 414 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L ++Y D PW L K DR + VLY E I A LL +F+P+ A KI Sbjct: 415 LFRRCNKYIDETTPWVLAKDEAQQDRLAEVLYNLTESITIGASLLHSFLPETAEKI---- 470 Query: 478 FVADENRCFQSLDQRLKPGF 497 VA N + D K G Sbjct: 471 -VAQLNTTLREFDDLDKFGL 489 >gi|223985467|ref|ZP_03635526.1| hypothetical protein HOLDEFILI_02832 [Holdemania filiformis DSM 12042] gi|223962556|gb|EEF67009.1| hypothetical protein HOLDEFILI_02832 [Holdemania filiformis DSM 12042] Length = 642 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 207/478 (43%), Positives = 315/478 (65%), Gaps = 9/478 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 EK YI+TAIAY + +PHIG+ YE+++AD +AR+ R+ G DV F TGTDEHGQKI A+ Sbjct: 3 EKYYITTAIAYTSGKPHIGNTYEIVLADSIARYKRMLGYDVFFQTGTDEHGQKIEDKAKA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AGV + FVDQ + +++ D+++ SYD F+RTT+ H + ++KK+ D+GDIYK Y Sbjct: 63 AGVAPQQFVDQVAGQIKEIWDLMNTSYDKFMRTTDPDHERQVQKIFKKLYDQGDIYKSEY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY E+++ + ++ DG+ + PV+ +EE YFFR+S Y D+LL + E +P Sbjct: 123 EGWYCKPCESFFTESQI---VDGKCPDC-GAPVEKAKEEAYFFRMSKYADRLLKHIEENP 178 Query: 185 EFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 EFI P R+NE+I+ F+K GL+DL +SR +F WG+ + DP++++YVWIDALTNY+T G Sbjct: 179 EFIQPESRKNEMINNFIKPGLQDLCVSRTSFTWGVPVDFDPKHVVYVWIDALTNYITGLG 238 Query: 244 Y-LDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 Y D G K K +WPAD+H+IGKDILRFH IYWP L++ +LPLPK+VF H ++L Sbjct: 239 YDCDGNHGEKFKHYWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHPWLLVGEG 298 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNVI +++ GVDA+RY ++ E+ +DG + + +R+N+DLAN +GNL Sbjct: 299 KMSKSKGNVIYADDLVRYFGVDAVRYIMLHEMPFAQDGTVTYELMIERINSDLANILGNL 358 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 V+R++SM K + G++ D+ ++++ +++ M + A+ ++ +L+ Sbjct: 359 VNRTLSMTNKYFGGLVHNANVSDPIDDELIALAKATPANVQKKMDELRVADAIDEIFALL 418 Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++Y D PW L K T DR +TVLY +E IR AILL++++P+ + I D L Sbjct: 419 RRSNKYIDETMPWALGKDETKKDRLATVLYNLLESIRIAAILLESYLPETSKAILDQL 476 >gi|300362468|ref|ZP_07058644.1| methionine--tRNA ligase [Lactobacillus gasseri JV-V03] gi|300353459|gb|EFJ69331.1| methionine--tRNA ligase [Lactobacillus gasseri JV-V03] Length = 681 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 211/524 (40%), Positives = 325/524 (62%), Gaps = 18/524 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + IG+AY I AD + R+ + G D F TGTDEHG KI + Sbjct: 24 MAEKKTFYITTPIYYPSGKLTIGNAYTTIAADTMTRYKKSRGFDTFFLTGTDEHGLKIEQ 83 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD+ + +++++ +LD+SYD FIRTT++ H + +++K+ +GDIY Sbjct: 84 KAEAQGIKPQEFVDKMAASYKELWKMLDVSYDRFIRTTDEDHVKAVQKIFEKLLKQGDIY 143 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVYK +G + + V+ ++E YFFR+S Y D Sbjct: 144 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFRMSKYAD 203 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ HP+FILP R E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 204 RLLQYYKDHPDFILPHSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 263 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK++F H Sbjct: 264 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 323 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P +++ G+DALRY+L+R I G DG + + +RVN D Sbjct: 324 GWVLMKDGKMSKSKGNAVYPEMIVKRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 383 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+VSMI + DG + P E + ++ + + E +++M + Sbjct: 384 LANDLGNLLNRTVSMINQYQDGQVAPVAAEQDEFAQDLIKTANETIAEYQKHMDALHFSQ 443 Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL V L+S ++Y D PW L K+ + S V+ E +R +AIL+ + + Sbjct: 444 ALDSVWKLISRANKYIDETTPWTLNKEGKSEELSKVMSNLAESLRLVAILIAPVMTQSPV 503 Query: 472 KIFDILFVADENR-----CFQSLDQRLKPGFMLHKTFDPIFPRF 510 K+F+ L + N F D +K + + PIFPR Sbjct: 504 KMFEQLGLDWNNEEQKKLEFGGFDWNVK----VTEKPTPIFPRL 543 >gi|331092546|ref|ZP_08341367.1| hypothetical protein HMPREF9477_02010 [Lachnospiraceae bacterium 2_1_46FAA] gi|330400658|gb|EGG80264.1| hypothetical protein HMPREF9477_02010 [Lachnospiraceae bacterium 2_1_46FAA] Length = 631 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 205/479 (42%), Positives = 309/479 (64%), Gaps = 13/479 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E +K Y++TAIAY + +PHIG+ YE ++AD +AR+ R G DV F TGTDEHGQKI A Sbjct: 2 ENKKFYMTTAIAYTSGKPHIGNTYEFVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + AGV+ K FVD + +++AD+++ SYD FIRTT++ H + ++KK+ D+GDIYKG Sbjct: 62 EEAGVSPKEFVDGVAAQVKEIADMMNTSYDKFIRTTDEYHEKQVQKIFKKLYDQGDIYKG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y E+++ + ++ DG+ + VQ +EE YFF++S Y D+L+ + + Sbjct: 122 HYEGMYCTPCESFFTESQL---VDGKCPDCGRK-VQPAQEEAYFFKMSKYADRLIEHINT 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+T Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 237 Query: 242 TGYLDNPDGSKAKF----WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 GY + DG +F WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H ++L Sbjct: 238 IGY--DCDGENNEFFNKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLL 295 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 K+SKS GNVI E++ GVDA+RYF++ E+ DG + + +R+N+DLAN Sbjct: 296 QGDGKMSKSKGNVIYADELVNMFGVDAVRYFVLHEMPFENDGVITWELMVERMNSDLANT 355 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 +GNLV+R++SM K + G + G E D + ++ + + E M + A+ ++ Sbjct: 356 LGNLVNRTISMTNKYFGGNVTDKGVTEEVDADLRAITENTPKAVDEKMDKLRVADAITEI 415 Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +L ++Y D PW L K + DR TVLY ++ I A LL +F+P+ A KI Sbjct: 416 FNLFKRCNKYIDETMPWALAKEDDKKDRLETVLYNLIQSISAGAELLSSFMPETAEKIL 474 >gi|313891833|ref|ZP_07825438.1| methionine--tRNA ligase [Dialister microaerophilus UPII 345-E] gi|313119827|gb|EFR43014.1| methionine--tRNA ligase [Dialister microaerophilus UPII 345-E] Length = 634 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 220/526 (41%), Positives = 326/526 (61%), Gaps = 28/526 (5%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+A+ HIGH Y +AD +ARF RLDG DV F G+DEHGQKI + Sbjct: 1 MSEKQAFYITTPIYYPSAKLHIGHTYCTTVADTVARFKRLDGKDVFFLCGSDEHGQKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A AGVT +VD+ + F+ + L+IS DDFIRTTE+RH + L++K DKGDIY Sbjct: 61 KATEAGVTPIEYVDKIVKGFQQLWKELNISNDDFIRTTEERHIKVVQKLFQKAYDKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 KG Y GWY + E ++ + ++ +G AD + + + EE YFF++S Y D+ L Sbjct: 121 KGKYEGWYCVPCETFWPESKLLEGNLCADCK------RECKRVSEEAYFFKMSKYADRWL 174 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237 + E +P FI P RRNE+I FVK+GL+DL +SR +F WGI +P DP++++YVW DALTN Sbjct: 175 KFIEENPHFIEPESRRNEMIQFVKNGLEDLCVSRTSFSWGIPVPFDPKHVVYVWFDALTN 234 Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 YLT G D+ + K K+WPA++H++GK+I+RFH I WP L+S ++ +PK+V+ HG+++ Sbjct: 235 YLTAVGIEDDKEKFK-KYWPANVHLVGKEIVRFHTIIWPIMLMSLDIEIPKQVYGHGWLV 293 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 +GEK+SKS GNV+DPI +I E G DA+RY+L+ +I G DG + +D L R+N+DL+N Sbjct: 294 VEGEKMSKSKGNVVDPIPLIHEFGSDAIRYYLMNDIQLGSDGNFGRDRLINRINSDLSND 353 Query: 358 IGNLVSRSVSMILK-----DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 +GNL+ R++SM+ K Y G I ++ +I VL+ + M N I+ Sbjct: 354 LGNLLYRTLSMVEKYRNGIVYKGDITGDKVIEDASLNIEKDLINVLENYKYGMNNWKIND 413 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL V + V +++Y D PW L K + D VLY E +R ++I + +P A Sbjct: 414 ALKSVWTYVRSLNKYIDITMPWTLAKDESKKDLLDAVLYHLCEGLRVVSIFVFPVIPIAA 473 Query: 471 NKIFDILFVADENRCFQSLD------QRLKPGFMLHKTFDPIFPRF 510 K+++ L + D F+S+ + + ++K PIFPR Sbjct: 474 EKMWNQLGLKD----FKSVQLSDVIWGKFEENTKINKGL-PIFPRI 514 >gi|269120234|ref|YP_003308411.1| methionyl-tRNA synthetase [Sebaldella termitidis ATCC 33386] gi|268614112|gb|ACZ08480.1| methionyl-tRNA synthetase [Sebaldella termitidis ATCC 33386] Length = 638 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 217/513 (42%), Positives = 321/513 (62%), Gaps = 11/513 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K Y+ST I YPNA+PH+G AY IIADV AR+ RL G +V F+TG DEHGQKI +AA+ Sbjct: 3 KKFYVSTPIYYPNAKPHVGTAYTTIIADVTARYMRLKGYEVKFSTGLDEHGQKIQEAAEK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 VT + +VD+ + NF+ + L+IS +FIRTTE+RH + + + K++ + GDIYKG Y Sbjct: 63 NNVTPQEWVDRMAENFKALWKKLNISNTEFIRTTEERHKISVKKMIKRVYENGDIYKGEY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + DE + D+ V +G + V+ E YFF+LS YQD+LL Y E +P Sbjct: 123 KGLYCVSDETFVPDNSVLEGNKCPHCGKDLIEVK---ENSYFFKLSKYQDRLLKYIEENP 179 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FILP R+NEV+SF+ GL+DLS+SR TF+WGI + + +++YVW DALTNY+T G+ Sbjct: 180 DFILPSYRKNEVVSFINQGLQDLSISRTTFNWGIPLELEEGHVIYVWFDALTNYITVAGF 239 Query: 245 LDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 D+ + W +H++GKDILRFHAI WPA L+SA +PLP V +HG+ +GEK Sbjct: 240 GDD-EKKFEDIWIDGKVMHLMGKDILRFHAIIWPAMLMSAGIPLPDTVAAHGWWTVEGEK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+E +E+ G+D RY+L+RE+ G DG Y + G+ +R+NADLAN +GNL+ Sbjct: 299 MSKSKGNVVDPLEEVEKYGLDPFRYYLMREVTFGLDGDYSQKGMIQRINADLANDLGNLL 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 +R++ M K +D + T +E I ++ +++I + L V +S Sbjct: 359 NRTIGMQKKYFDSAVVLEKEETALEEEIYALWKTTVEDIDTYFEKVQFSEVLKAVWKFIS 418 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +++Y D PW L K N R STV+Y VE + ++A+L+ F+P+ A K+++ L + Sbjct: 419 RMNKYIDETAPWILAKDPENKSRLSTVMYNLVESLYKIAVLISPFMPETAQKMWNQLGIN 478 Query: 481 DENRCFQSLDQR---LKPGFMLHKTFDPIFPRF 510 D + D + + P + PIFPR Sbjct: 479 DSIENIRLDDIKHWGVYPVNNILGEATPIFPRI 511 >gi|315037467|ref|YP_004031035.1| methionyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] gi|325955925|ref|YP_004286535.1| methionyl-tRNA synthetase [Lactobacillus acidophilus 30SC] gi|312275600|gb|ADQ58240.1| methionyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] gi|325332490|gb|ADZ06398.1| methionyl-tRNA synthetase [Lactobacillus acidophilus 30SC] gi|327182760|gb|AEA31207.1| methionyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118] Length = 658 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 212/521 (40%), Positives = 325/521 (62%), Gaps = 12/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + IG+AY I AD +AR+ R G D F TGTDEHG KI + Sbjct: 1 MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRAQGYDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD+ + +++ + LDISYD FIRTT+++H + +++K+ KGDIY Sbjct: 61 KAEAQGIKPQQFVDKMADSYKKLWKSLDISYDKFIRTTDEQHVKAVQKIFEKLLKKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVYK DG + + V+ ++E YFF++S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDDGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YY+ HP+FILP R E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 181 RLVEYYKEHPDFILPHSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK + H Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P + GVD LRY+L+R + G DG + + +R+N D Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGVDPLRYYLMRALPFGADGIFTPEDFVERINYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+VSMI + DG + P P A + + + + V+ E RE M + + Sbjct: 361 LANDLGNLLNRTVSMINQYQDGHVDPVPVAQDKFGKDLQDTAASVIDEYREYMDSLHFSQ 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL + L++ ++Y D PW L K+ + S V+ E +R +AI+++ + + A Sbjct: 421 ALDSIWKLIARANKYIDETTPWVLNKEGKKEELSHVMSNLAESLRLIAIMIEPVMTETAP 480 Query: 472 KIFDILFVA--DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 K+F+ L + DE++ S ++ K PIFPR Sbjct: 481 KMFEQLGLNWDDEDQRGLSFGDFAWDTKVIEKP-KPIFPRL 520 >gi|229551470|ref|ZP_04440195.1| methionine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|258540783|ref|YP_003175282.1| methionyl-tRNA synthetase/protein secretion chaperonin, CsaA [Lactobacillus rhamnosus Lc 705] gi|229315153|gb|EEN81126.1| methionine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|257152459|emb|CAR91431.1| methionyl-tRNA synthetase / protein secretion chaperonin, CsaA [Lactobacillus rhamnosus Lc 705] Length = 660 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 210/521 (40%), Positives = 322/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + Y++T I YP+ + HIG+AY I ADVLAR+ RL G DV F TGTDEHG KI + Sbjct: 1 MASKPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A GVT + +VD + + + +L+I+ D FIRTT+K H + + + +++ +GD+Y Sbjct: 61 KADKLGVTPQAYVDGMAAQIKQLWKMLEITNDKFIRTTDKEHVEAVQEIVERLIKQGDVY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVY+ DG+ + + VQ + E YFF++S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLSEVYRDKDGKVIGGKAPSGHEVQLVHEPSYFFKMSKYTD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ HP+F+ P R+ E+I+ F+K GL+DL++SR +F+WG++IP DP++++YVW+D Sbjct: 181 RLLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVD 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T GY N K+WPA++ +IGK+I+RFH IYWP L++ +LPLPKK+++H Sbjct: 241 ALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALDLPLPKKIYAH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+++ K K+SKS GN I P ++E G+DALRY+L+R I G DG + + R+N D Sbjct: 301 GWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K G++P T D+ + V L + + M Sbjct: 361 LANDLGNLLNRTIAMINKYEGGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSD 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL QV +VS ++Y D +PW+L K D+ +V+ E +R +A+L+Q + Sbjct: 421 ALDQVWKIVSRANKYIDETEPWKLAKDPAKKDQLDSVMAHLAESLRLIALLIQPVMTHAP 480 Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 +IF L + EN + + L G + + PIFPR Sbjct: 481 VQIFGQLGLDHENEDHKVVKWGALPAGAKVVEQGTPIFPRL 521 >gi|169830260|ref|YP_001716242.1| methionyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] gi|169637104|gb|ACA58610.1| methionyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] Length = 516 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 210/512 (41%), Positives = 312/512 (60%), Gaps = 11/512 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + YI+T I YP+ HIGHAY + AD +ARF RL G DV F TG+DEHGQKI + A Sbjct: 5 KPPFYITTPIYYPSDNLHIGHAYTTVAADTVARFKRLTGYDVYFLTGSDEHGQKIERTAA 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G + +VD+ F+ + L+I Y DFIRTTE RH +++++ ++GDIYK Sbjct: 65 ARGKNPQEYVDEIVAGFKRLWSRLEIDYSDFIRTTEDRHKRVVTDIFRRLHEQGDIYKSS 124 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y EA++ D +V +G PV+ + EE YFFR S Y ++LL++ + + Sbjct: 125 YEGLYCTPCEAFWTDRQVVEGNCPDC----GRPVELVAEESYFFRQSRYAERLLAHIDRN 180 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P+ RRNEV+SF+K GL+DL +SR TF+WGI +P DP++++YVW+DALTNY++ Sbjct: 181 PDFIQPVSRRNEVVSFIKMGLEDLCVSRTTFNWGIPVPFDPRHVIYVWVDALTNYISALN 240 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D ++WP D+H++GKDI+RFH I WP L++A +PLPK+V HG+++ + K+ Sbjct: 241 YGAEDDSLYRRYWPVDVHLVGKDIVRFHCIIWPIILMAAGIPLPKRVVGHGWLMLESGKM 300 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP +I+ GVDA+RY+L+RE+ G DG+Y +D L +R+N DLAN +GNL+S Sbjct: 301 SKSKGNVVDPFVLIDRYGVDAIRYYLLREMLFGADGYYSEDNLIRRINVDLANDLGNLLS 360 Query: 364 RSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R+ +MI K DG I PG + D ++ + E+ + + AL ++ LV Sbjct: 361 RTTAMIDKYLDGEIQAPGPADDPLDRELIDLALITPGEVAGLVNELDLSAALGAIMKLVG 420 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++Y + PW L K R + V+Y E R +LL F+P +++ L +A Sbjct: 421 RANKYIEETAPWTLAKDPAKKQRLAGVMYNLAESYRIATVLLSPFMPGFPARVWPQLGIA 480 Query: 481 D--ENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509 E ++SL RL G + + P+FPR Sbjct: 481 GRPELHTWESLTWGRLPAGTRIARG-APLFPR 511 >gi|313906147|ref|ZP_07839496.1| methionyl-tRNA synthetase [Eubacterium cellulosolvens 6] gi|313469034|gb|EFR64387.1| methionyl-tRNA synthetase [Eubacterium cellulosolvens 6] Length = 662 Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust. Identities = 210/494 (42%), Positives = 317/494 (64%), Gaps = 15/494 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E Y++TAIAY + +PHIG+ YE+++AD +ARF R+ G +V F TGTDEHGQKI A Sbjct: 7 ENYYMTTAIAYASGKPHIGNTYEIVLADSIARFRRMQGYNVFFQTGTDEHGQKIENKATE 66 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AGVT K +VD + R + D+++ SYD FIRTT+ H + ++KK+ DKGDIY G Y Sbjct: 67 AGVTPKQYVDNTAGEIRRIWDLMNTSYDKFIRTTDDYHEAQVQKMFKKMFDKGDIYLGSY 126 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY E+++ + ++ DG+ + V E YFFR+S Y KL+ + SHP Sbjct: 127 EGWYCTPCESFWTESQL---VDGKCPDCGRE-VTKANEPAYFFRMSKYAQKLIDHINSHP 182 Query: 185 EFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 +FI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+T G Sbjct: 183 DFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITGIG 242 Query: 244 YLDNPDGSK----AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 Y + DG+ KFWPADLH+IGKDI+RFH IYWP FL+S +LPLPK+VF H +++ Sbjct: 243 Y--DCDGNHTEQFGKFWPADLHLIGKDIIRFHTIYWPIFLMSLDLPLPKQVFGHPWLIQA 300 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GNVI ++++ GVDA+RYF++ E+ DG D + +R+N+DLAN +G Sbjct: 301 DGKMSKSKGNVIYADDLVDMFGVDAVRYFVLHEMPFENDGVISWDLMVERMNSDLANTLG 360 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLV+R++SM K + G++ GA D+ + +V + Q++ + M++ + A++++ + Sbjct: 361 NLVNRTISMSNKYFGGVVENRGAAEPVDDELKAVVTSTAQKVEDKMKDLHVADAISEIFT 420 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L ++Y D PW + K DR +TV+Y VE I A LL+ ++P+ KI L Sbjct: 421 LFKRCNKYIDETTPWVIAKDEAKQDRLATVMYNLVESIIIGASLLRPYLPETTEKILAQL 480 Query: 478 FVADENRCFQSLDQ 491 + R ++ LDQ Sbjct: 481 NAKE--RDYEVLDQ 492 >gi|306820842|ref|ZP_07454465.1| methionine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551114|gb|EFM39082.1| methionine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 655 Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust. Identities = 207/513 (40%), Positives = 319/513 (62%), Gaps = 8/513 (1%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++++ YI+T I YP+ + HIGH Y + D ++R+ R G DV F TGTDEHG+KI K Sbjct: 13 QDKKTFYITTPIYYPSGKLHIGHTYTTVAVDAISRYKRFTGYDVRFLTGTDEHGEKIQKK 72 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G K ++D + + + ++ISYDDFIRTT+KRH + + ++K + DKGDIY Sbjct: 73 AEELGKKPKEYLDGMIDDIKALWAKMEISYDDFIRTTDKRHTEAVQKIFKTLYDKGDIYL 132 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y G Y + E+++ + ++ DG+ + H VQ +E YFFRLS YQD+L YYE Sbjct: 133 DEYEGKYCVPCESFWTESQL---VDGKCPDC-HREVQTRKESSYFFRLSKYQDRLKKYYE 188 Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 +P+F P R+ E+++ F+ +GL+DLS+SR TFDWGIK+P D ++++YVWIDAL+NY+T Sbjct: 189 DNPDFCFPESRKKEMLTNFINAGLEDLSVSRSTFDWGIKVPFDEKHVIYVWIDALSNYIT 248 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY + D K+WPAD H++GK+I+RFH I WPA L++ +LPLPKKV+ HG+IL Sbjct: 249 ALGYDSDDDSLFKKYWPADFHIVGKEIMRFHTIIWPALLMALDLPLPKKVYGHGWILFGE 308 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKS GN++ P +IE G+DAL+YFL+RE G+DG Y R+N+DLAN +GN Sbjct: 309 DKMSKSKGNIVYPEPIIERYGIDALKYFLLREFTFGQDGNYTNSAFLNRINSDLANDLGN 368 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+SR+VSMI K +G+IP T + ++S ++ + + + M AL ++ + Sbjct: 369 LLSRTVSMIEKYNNGIIPIISKKTAFHDDLVSTVEQMPELVDKAMNQMQFSIALEEIWKV 428 Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 + ++Y D PW+L K + + VLY E +R + I++ + A +IF L Sbjct: 429 IRRANKYVDETMPWKLAKDESAKEELDCVLYDLAETLRIVTIMISPILHHTAKRIFAQLN 488 Query: 479 VADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510 DE + +++ + L P + + +FPR Sbjct: 489 TPDELKTYENGKKFGLTPANIKVGKSEILFPRL 521 >gi|227888942|ref|ZP_04006747.1| methionyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] gi|227850530|gb|EEJ60616.1| methionyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] Length = 664 Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust. Identities = 208/520 (40%), Positives = 324/520 (62%), Gaps = 10/520 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + IG+AY I AD + R+ + G D F TGTDEHG KI + Sbjct: 7 MAEKKTFYITTPIYYPSGKLTIGNAYTTIAADTMTRYKKSRGFDTFFLTGTDEHGLKIEQ 66 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD+ + +++D+ +LD+SYD FIRTT++ H + +++++ +GDIY Sbjct: 67 KAEAQGIKPQEFVDKMADSYKDLWKMLDVSYDRFIRTTDEDHVKAVQKIFERLLKQGDIY 126 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVY+ DG + + V+ ++E YFFR+S Y D Sbjct: 127 LGEYTGWYSVEDEEYFTESQLAEVYRDDDGNVIGGKAPSGHEVRLVKEPSYFFRMSKYAD 186 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ HP+FILP R E+++ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 187 RLLQYYKDHPDFILPHSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 246 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK++F H Sbjct: 247 ALSNYITALGYGSDNDALFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 306 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L + K+SKS GN + P +++ G+DALRY+L+R I G DG + + +RVN D Sbjct: 307 GWVLMRDGKMSKSKGNAVYPEMIVKRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 366 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+VSMI + DG + P E + ++ + + E ++ M + Sbjct: 367 LANDLGNLLNRTVSMINQYQDGQVAPVASEQDEFAKDLIKTANETIAEYQKQMDALHFSQ 426 Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL V L+S ++Y D PW L K+ + S V+ E +R +AIL+ + + Sbjct: 427 ALDSVWKLISRANKYIDETTPWTLNKEGKSEELSKVMTNLAESLRLIAILIAPVMTQSPV 486 Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 K+F+ L + +N + LD + + PIFPR Sbjct: 487 KMFEQLGLDWKNDDQKKLDFGGFDWNIKVTEKPTPIFPRL 526 >gi|169351609|ref|ZP_02868547.1| hypothetical protein CLOSPI_02389 [Clostridium spiroforme DSM 1552] gi|169291831|gb|EDS73964.1| hypothetical protein CLOSPI_02389 [Clostridium spiroforme DSM 1552] Length = 638 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 209/498 (41%), Positives = 324/498 (65%), Gaps = 15/498 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 MK + Y++TAI Y + +PHIG+ YE+I+AD +ARF R +G +V F TGTDEHGQKI Sbjct: 1 MKNEKDYYLTTAITYTSGKPHIGNTYEIILADAIARFKRQEGYNVYFQTGTDEHGQKIEL 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+ + FVD+ + + + D++D +YD F+RTT++ H + ++KK+ D+GDIY Sbjct: 61 KAKEAGIPPQQFVDEKAAEVKRIWDLMDTTYDRFMRTTDEYHKKQVQKIFKKLYDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 G Y G Y E+++ + ++ DG+ + PV +EE YFF+LS Y D+L+ + Sbjct: 121 LGHYEGKYCTACESFFTESQL---VDGKCPDCG-GPVNDAKEEAYFFKLSKYADRLIEHI 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 E HPEFI P+ R+NE+++ F+K GL+DL +SR +F W I + DP++++YVWIDALTNY+ Sbjct: 177 EKHPEFIQPVSRKNEMMNNFLKPGLQDLCVSRTSFTWSIPVDFDPKHVVYVWIDALTNYI 236 Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 T GY + DG+ K+WPADLH+IGKDI+RFH IYWP L++ ++PLPK+VF H + Sbjct: 237 TGLGY--DVDGNHGELYKKYWPADLHLIGKDIVRFHTIYWPIMLMALDIPLPKQVFGHPW 294 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L K+SKS GNVI ++++ GVDA+RY+++ EI DG D L +++N+DLA Sbjct: 295 LLQGESKMSKSKGNVIYADDLVDIFGVDAVRYYVLHEIPYDNDGSITWDLLVEKINSDLA 354 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N +GNLV+R++SM K +DG++ P + DE ++++ + +++ M + AL Sbjct: 355 NVLGNLVNRTISMSNKYFDGIVNNPKVYEPVDEELINIALEMPKKVINKMDDFKSSDALD 414 Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + +L+ ++Y D PW L K + +R +TVLY +E IR AI L F+P ANKI Sbjct: 415 AIFTLLRRTNKYIDETMPWALAKDESKKERLATVLYNLIESIRFSAIALIPFIPSTANKI 474 Query: 474 FDILFVADENRCFQSLDQ 491 D + + R +Q+L++ Sbjct: 475 LDQ--INTDQRDYQTLNE 490 >gi|282848951|ref|ZP_06258340.1| methionine--tRNA ligase [Veillonella parvula ATCC 17745] gi|282581226|gb|EFB86620.1| methionine--tRNA ligase [Veillonella parvula ATCC 17745] Length = 648 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 209/515 (40%), Positives = 316/515 (61%), Gaps = 13/515 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+A+ HIGH Y +AD +ARF RL G DV F TG+DEHGQKI +AA+ Sbjct: 5 KKTYYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAAE 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + F+ + + + IS DDFIRTT++RH + L+ K +KGDIYK Sbjct: 65 AQGITPLEYTTNIVNGFKALWEKMHISNDDFIRTTDERHEKVVQALFTKAYEKGDIYKAE 124 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY DE ++ + ++ G + + PV+ ++EE YFF+L Y D+ L + E + Sbjct: 125 YEGWYCTPDETFWTEQKL--GPNHTCPDCGR-PVERVKEESYFFKLGKYTDQWLKFIEEN 181 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNE+I FV GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++ Sbjct: 182 PDFIQPESRRNEMIQFVNQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISALS 241 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 D K+WPADLH++GK+I+RFH I WP L+S LPLPKKVF HG+++ G K+ Sbjct: 242 PFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNVIDPI +I+ G D+LRY+L+ EI G DG + ++NADL+N +GNL++ Sbjct: 302 SKSLGNVIDPIPLIDTYGADSLRYYLLSEITLGNDGNFTLPNFVTKINADLSNDLGNLLN 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+++MI K + G+I + D + ++ + ++ M+N +++A+ V S + Sbjct: 362 RTIAMIEKYHGGVITKCDDMDDLDRDVSTLAVQTAKDFEAAMENMELNKAIKTVWSFIGR 421 Query: 424 VDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +++Y D PW L K+ + R + +Y E +R +AIL+ +P A KI++ L + Sbjct: 422 MNKYIDETMPWVLAKSEDAHDKARLQSAMYHLAEALRIIAILVSPVIPVGAPKIWEQLGL 481 Query: 480 ADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510 +L+ G + T +PI+PRF Sbjct: 482 TGFEAA--TLEDAKTWGLLATGTKVVKGEPIYPRF 514 >gi|116511600|ref|YP_808816.1| methionyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] gi|116107254|gb|ABJ72394.1| methionyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] Length = 666 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 213/519 (41%), Positives = 320/519 (61%), Gaps = 10/519 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E + YI+T I YP+ + H+G +Y I DVLAR+ RL G D + TG DEHG KI + Sbjct: 1 MTENKTFYITTPIYYPSGKLHLGSSYTTIACDVLARYKRLMGFDTFYLTGLDEHGMKIQR 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T K ++D + + +++ LDISYD FIRTT+ H + + +++K+ ++ DIY Sbjct: 61 KAEELGMTPKEYLDPMAADVQELWKKLDISYDKFIRTTDTYHEEAVQKIFEKLLEQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE ++ + +EV+K G + V+W+EEE YFFR+ Y D Sbjct: 121 LGKYAGWYSVSDEEFFTETQLEEVFKDEAGNVTGGIAPSGHEVEWVEEESYFFRMGKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 LL +YE++P FI P R+NE+I+ F+K GL+DL++SR TF WGI + +P++++YVW+D Sbjct: 181 WLLDFYEANPTFIEPAIRKNEMINNFIKPGLEDLAVSRTTFTWGIPVKSNPKHVVYVWLD 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T G+ + D KFWP ++++GK+I+RFH IYWP F + + PK+VF+H Sbjct: 241 ALFNYVTALGFYGDDDSLYKKFWPG-VNMVGKEIVRFHTIYWPIFCKALGIEPPKQVFAH 299 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P +IE G+DA+RY+L+R I+ G+DG + + R+N D Sbjct: 300 GWLLMKDGKMSKSKGNVVYPEMLIERYGLDAVRYYLMRAISFGQDGIFTPEDFVGRINFD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 LAN +GNL++R+VSMI K DG I G TE D S+ V + + M + A Sbjct: 360 LANDLGNLLNRTVSMINKYNDGKIEATGVSTEFDASLEEVVEETISHFHKAMDKFEFNVA 419 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 LA V +L+S ++Y D PW L K+ D+A + VLY E +R LLQ F+ + Sbjct: 420 LADVWTLISRTNKYIDETAPWVLAKSEDDKAKLNNVLYHLAENLRIAGSLLQPFMRATSG 479 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 KIF+ L + +E+ ++L + PIFPR Sbjct: 480 KIFEQLGMDEESFSLENLAFGYSFTHPVVAKGQPIFPRL 518 >gi|282931725|ref|ZP_06337213.1| methionine--tRNA ligase [Lactobacillus jensenii 208-1] gi|297205161|ref|ZP_06922557.1| methionine--tRNA ligase [Lactobacillus jensenii JV-V16] gi|281304168|gb|EFA96282.1| methionine--tRNA ligase [Lactobacillus jensenii 208-1] gi|297149739|gb|EFH30036.1| methionine--tRNA ligase [Lactobacillus jensenii JV-V16] Length = 662 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 211/523 (40%), Positives = 326/523 (62%), Gaps = 19/523 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + IG+AY I AD +AR+ R G + F TGTDEHG KI + Sbjct: 1 MADKKTFYITTPIYYPSGRLTIGNAYTTIAADSMARYKRSQGYETFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+ + +VD ++ ++++ LDISYD FIRT++ H + +++K+ +GDIY Sbjct: 61 KAEKAGIKPQEYVDGMAKQYKELWKKLDISYDKFIRTSDPEHVKAVQAIFEKLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EV+K +G+ + VQ ++E YFFR+S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLKEVFKDDNGKVIGGIAPSGHKVQLVKEPSYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ HPEFILP R E+++ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 181 RLLKYYQDHPEFILPHSREKEMVNNFIKPGLEDLSVTRTTIDWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D KFWPAD+H++GK+I+RFH IYWP L++ +LPLPK++F H Sbjct: 241 ALSNYITALGYGSDDDSLFKKFWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L +K+SKS GN + P +++ G+DALRY+L+R I G DG + + +RVN D Sbjct: 301 GWVLIYKDKMSKSKGNAVYPESIVDRFGLDALRYYLMRAIPFGSDGSFSPEDFVERVNFD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 LAN +GNL++R+VSMI + G++ PG+ + ++ + E ++ M +A Sbjct: 361 LANDLGNLLNRTVSMINQYQAGLVSKPGSQDDLGNNLAKFADETIAEYQKQMDALHFSQA 420 Query: 414 LAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 L + V ++Y D PW L K+ + + V+ E +R +AI++ + + + Sbjct: 421 LDAIWKFVGRANKYIDETTPWVLNKEGKTEELARVMANLAESLRLIAIMISPIMTESPAQ 480 Query: 473 IFDILFVADENRCFQSLDQR-LKPG-FMLH-KTFD---PIFPR 509 IF+ L + F+ DQ+ LK G F + K D PIFPR Sbjct: 481 IFEQLGL-----NFEEADQKALKFGEFAWNIKVTDKPAPIFPR 518 >gi|256851968|ref|ZP_05557355.1| methionyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260661462|ref|ZP_05862375.1| methionyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|256615380|gb|EEU20570.1| methionyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260547917|gb|EEX23894.1| methionyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] Length = 668 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 211/523 (40%), Positives = 326/523 (62%), Gaps = 19/523 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + IG+AY I AD +AR+ R G + F TGTDEHG KI + Sbjct: 7 MADKKTFYITTPIYYPSGRLTIGNAYTTIAADSMARYKRSQGYETFFLTGTDEHGLKIEQ 66 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+ + +VD ++ ++++ LDISYD FIRT++ H + +++K+ +GDIY Sbjct: 67 KAEKAGIKPQEYVDGMAKQYKELWKKLDISYDKFIRTSDPEHVKAVQAIFEKLLKQGDIY 126 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EV+K +G+ + VQ ++E YFFR+S Y D Sbjct: 127 LGEYTGWYSVEDEEYFTESQLKEVFKDDNGKVIGGIAPSGHKVQLVKEPSYFFRMSKYAD 186 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ HPEFILP R E+++ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 187 RLLKYYQDHPEFILPHSREKEMVNNFIKPGLEDLSVTRTTIDWGIPVPSDPKHVVYVWID 246 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D KFWPAD+H++GK+I+RFH IYWP L++ +LPLPK++F H Sbjct: 247 ALSNYITALGYGSDDDSLFKKFWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 306 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L +K+SKS GN + P +++ G+DALRY+L+R I G DG + + +RVN D Sbjct: 307 GWVLIYKDKMSKSKGNAVYPESIVDRFGLDALRYYLMRAIPFGSDGSFSPEDFVERVNFD 366 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 LAN +GNL++R+VSMI + G++ PG+ + ++ + E ++ M +A Sbjct: 367 LANDLGNLLNRTVSMINQYQAGLVSKPGSQDDLGNNLAKFADETIAEYQKQMDALHFSQA 426 Query: 414 LAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 L + V ++Y D PW L K+ + + V+ E +R +AI++ + + + Sbjct: 427 LDAIWKFVGRANKYIDETTPWVLNKEGKTEELARVMANLAESLRLIAIMISPIMTESPAQ 486 Query: 473 IFDILFVADENRCFQSLDQR-LKPG-FMLH-KTFD---PIFPR 509 IF+ L + F+ DQ+ LK G F + K D PIFPR Sbjct: 487 IFEQLGL-----NFEEADQKALKFGEFAWNIKVTDKPAPIFPR 524 >gi|257466511|ref|ZP_05630822.1| methionyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] gi|315917667|ref|ZP_07913907.1| methionyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] gi|313691542|gb|EFS28377.1| methionyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] Length = 640 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 221/524 (42%), Positives = 315/524 (60%), Gaps = 37/524 (7%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y N PH+G AY I ADV++R+ +L G +V F TGTDEHGQK+ + A+ G Sbjct: 4 FYVTTPIYYVNGDPHVGSAYTTIAADVMSRYQKLAGKNVYFLTGTDEHGQKVEQTAKEKG 63 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + + D+ + F +M L+I Y DFIRTTE+RH D+ + + K + +KGDIYKG Y G Sbjct: 64 FTPQAWTDKMAPAFTEMWKALNIHYSDFIRTTEQRHKDSVKKILKTVYEKGDIYKGEYEG 123 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYE 181 Y + E ++ ++++ + A H P + ++EE YFFR+S YQD LL + E Sbjct: 124 QYCISCETFFPENQIVE--------AGHCPDCGKKLSTVKEESYFFRMSKYQDALLKHIE 175 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HP+FILP RRNEVISF+K GL+DLS+SR TF WGI I P +I YVW DALTNY+T Sbjct: 176 EHPDFILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIEFAPGHITYVWFDALTNYITA 235 Query: 242 TGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 TGY +N +W H+IGKDI+RFHAI WP LLSA + LP + +HG+ + Sbjct: 236 TGY-ENDSEKFDTYWNNARVCHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSE 294 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 GEK+SKS GNV++P + I++ GVDA RY+L+RE G DG Y G+ RVN+DLAN +G Sbjct: 295 GEKMSKSKGNVVNPYDEIKKYGVDAFRYYLLREANFGSDGDYSTKGVVGRVNSDLANDLG 354 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL++R++ M K + G I G + E + S+ + L ++ ++M RAL + Sbjct: 355 NLLNRTLGMYHKYFQGSIVASGNYEEIENSVHQMWEDTLTQVDKHMYYYEYSRALECIWK 414 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +S +++Y D PW L K T R +TV+ VE + ++A+L+ +P+ A KI+ L Sbjct: 415 FISRMNKYIDETMPWALAKEETQKTRLATVMNTLVESLYKIAVLVSPVIPEAAQKIWSQL 474 Query: 478 FVADENRCFQSLDQRLKPGFMLH--KTFD---------PIFPRF 510 V + + + RL LH TF+ PIFPR Sbjct: 475 GVEKDIQ-----EARLSS---LHTWNTFEEKHTLGKATPIFPRI 510 >gi|268318773|ref|YP_003292429.1| hypothetical protein FI9785_278 [Lactobacillus johnsonii FI9785] gi|262397148|emb|CAX66162.1| metS [Lactobacillus johnsonii FI9785] Length = 658 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 208/520 (40%), Positives = 322/520 (61%), Gaps = 10/520 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + IG+AY I AD + R+ + G D F TGTDEHG KI + Sbjct: 1 MAEKKTFYITTPIYYPSGKLTIGNAYTTIAADTMTRYKKSRGFDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD+ + +++D+ +LD+SYD FIRTT+ H + +++++ +GDIY Sbjct: 61 KAEAQGIKPQEFVDKMANSYKDLWKMLDVSYDRFIRTTDDDHVKAVQKIFERLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVYK DG + + V+ ++E YFFR+S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDDGNVIGGKAPSGHEVRLVKEPSYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ HP+FILP R E+++ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 181 RLLQYYKDHPDFILPHSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK++F H Sbjct: 241 ALSNYITALGYGSDNDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P +++ G+DALRY+L+R I G DG + + +RVN D Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVKRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+VSMI + DG + P E + ++ + + E ++ M + Sbjct: 361 LANDLGNLLNRTVSMINQYQDGQVAPVASEQDEFAKDLIKTANETIAEYQKQMDALHFSQ 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLAN 471 AL V L+S ++Y D PW L K + + V+ E +R +AIL+ + + Sbjct: 421 ALDSVWKLISRANKYIDETTPWTLNKEGKNEELAKVMTNLAESLRLIAILIAPVMTQSPV 480 Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 ++F+ L + +N + LD + + PIFPR Sbjct: 481 QMFEQLGLDWKNDDQKKLDFGGFDWNIKVTEKPTPIFPRL 520 >gi|225575677|ref|ZP_03784287.1| hypothetical protein RUMHYD_03770 [Blautia hydrogenotrophica DSM 10507] gi|225037134|gb|EEG47380.1| hypothetical protein RUMHYD_03770 [Blautia hydrogenotrophica DSM 10507] Length = 660 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 211/481 (43%), Positives = 308/481 (64%), Gaps = 13/481 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK YI+TAIAY + +PHIG+ YE ++AD +ARF R +G DV F TGTDEHGQKI AQ Sbjct: 13 KEKYYITTAIAYTSGKPHIGNTYEAVLADAIARFKRQEGYDVFFQTGTDEHGQKIEMKAQ 72 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AGVT + FVD + + + D+++ SYD FIRTT+ H + ++KK+ ++GDIYKG Sbjct: 73 EAGVTPQKFVDGVASQIKSIWDLMNTSYDKFIRTTDDYHERQVQKIFKKLYEQGDIYKGH 132 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ DG+ + PV +EE YFFR+S Y D+L+ + +H Sbjct: 133 YEGMYCTPCESFFTESQL---VDGKCPDCGR-PVTPAKEEAYFFRMSKYADRLIEHINTH 188 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP +++YVW+DALTNY+T Sbjct: 189 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPDHVVYVWLDALTNYITGI 248 Query: 243 GYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 GY + DG K WPADLH+IGKDI+RFH IYWP FL++ LPLPK+VF H ++L Sbjct: 249 GY--DCDGESTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALGLPLPKQVFGHPWLLQ 306 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K+SKS GNVI E+++ GVDA+RYF++ E+ DG + + +R+N++LAN + Sbjct: 307 GDGKMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSELANTL 366 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNLV+R++SM K + G++ G DE++ + V +++ M + A+ +V Sbjct: 367 GNLVNRTISMSNKYFGGVVADKGVAEPVDEALKAFVLEVPKKVVAKMDELRVADAMTEVF 426 Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 SL ++Y D PW L K + DR +TVLY VE I A LLQ+F+P +I Sbjct: 427 SLFKRCNKYIDETMPWALAKDESKQDRLATVLYNLVEGICIGATLLQSFMPDTTGRILGQ 486 Query: 477 L 477 L Sbjct: 487 L 487 >gi|291521134|emb|CBK79427.1| methionyl-tRNA synthetase [Coprococcus catus GD/7] Length = 658 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 212/489 (43%), Positives = 320/489 (65%), Gaps = 11/489 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAIAY + +PHIG+ YE+++AD +ARF R+ G DV F TGTDEHGQKI A AG+ Sbjct: 7 YITTAIAYTSGKPHIGNTYEIVLADSIARFKRMQGYDVRFQTGTDEHGQKIEIKAGEAGI 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K FVD S +++ D+++ SYD FIRTT++ H + ++KK+ D+GDIYKG Y G Sbjct: 67 TPKQFVDNVSGQIKEIWDLMNTSYDKFIRTTDEYHEKQVQKIFKKLHDQGDIYKGYYEGK 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + + +EE YFF+LS Y D+L+ Y +HPEFI Sbjct: 127 YCTPCESFFTESQL---VDGKCPDCGREVID-AKEEAYFFKLSKYADRLIDYINTHPEFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-L 245 P R+NE+++ F+ GL+DL +SR +F WGI + D ++++YVWIDAL+NY+T GY + Sbjct: 183 QPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWIDALSNYITGLGYDV 242 Query: 246 D-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D N D K+WPADLH+IGKDI+RFH IYWP L++ +LPLPK+VF H ++L K+S Sbjct: 243 DGNSDELYKKYWPADLHLIGKDIIRFHTIYWPIMLMALDLPLPKQVFGHPWLLVGDGKMS 302 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNVI +++ GVDA+RYF++ E+ DG + + +R+N+DLAN +GNLV+R Sbjct: 303 KSKGNVIYADDLVNYFGVDAVRYFVLHEMPFDNDGSITWELMVERMNSDLANILGNLVNR 362 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 ++SM K + G+I PG D+ + +V + +++ M+ + A+ +V +L+ Sbjct: 363 TISMNNKYFGGVISNPGVNEPVDDDLKAVALAMHEKVDAKMEKLRVADAITEVFTLLRRC 422 Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++Y D +PW+L K T DR +TVLY +E IR A+ L A++P + +I D+L + Sbjct: 423 NKYIDETEPWKLAKDETKQDRLATVLYNLMEGIRMAAVALAAYLPDTSARILDML--GTQ 480 Query: 483 NRCFQSLDQ 491 R + LDQ Sbjct: 481 ERDYLKLDQ 489 >gi|239628933|ref|ZP_04671964.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519079|gb|EEQ58945.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 674 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 210/478 (43%), Positives = 309/478 (64%), Gaps = 13/478 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI + AQ Sbjct: 6 KKPYYITTAIAYASGKPHIGNTYEIVLADSIARYKREQGYDVFFQTGTDEHGQKIEEKAQ 65 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AGVT K FVD+ + R + D+++ SYD FIRTT+ H + ++KK+ D+GDIYKG Sbjct: 66 AAGVTPKEFVDKAAAEIRRIWDLMNTSYDKFIRTTDADHEAQVQKIFKKLYDQGDIYKGY 125 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ DG+ + V+ +EE YFFR+S Y +L+ + H Sbjct: 126 YEGLYCTPCESFFTESQL---VDGKCPDCGRE-VKPAKEEAYFFRMSKYAPRLIEHINQH 181 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEFI P+ R+NE+++ F+ GL+DL +SR TF WGI + DP+++ YVW+DALTNY+T Sbjct: 182 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTTFSWGIPVDFDPKHVTYVWLDALTNYITGI 241 Query: 243 GYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 GY + DGS K+WPADLH+IGKDI+RFH IYWP FL++ ++PLPK+VF H ++L Sbjct: 242 GY--DCDGSSTDQFKKYWPADLHLIGKDIIRFHTIYWPIFLMALDVPLPKQVFGHPWLLQ 299 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K+SKS GNV+ +++ GVDA+RYF++ E+ DG + + +R+N+DLAN + Sbjct: 300 GDGKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVISWELMVERMNSDLANIL 359 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNLV+R++SM K +DG+I GA E DE + V +++ M+ + A+ ++ Sbjct: 360 GNLVNRTISMSNKYFDGVIADKGAAGEVDEDLKKVVLEEVKKADAKMEQLRVADAMTEIF 419 Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 ++ ++Y D PW L K DR STVLY E I A LL +F+P+ A KI Sbjct: 420 NIFRRCNKYIDETTPWTLAKDEAQKDRLSTVLYNLTESITIGASLLYSFMPETAGKIL 477 >gi|225571222|ref|ZP_03780220.1| hypothetical protein CLOHYLEM_07311 [Clostridium hylemonae DSM 15053] gi|225160053|gb|EEG72672.1| hypothetical protein CLOHYLEM_07311 [Clostridium hylemonae DSM 15053] Length = 630 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 206/480 (42%), Positives = 309/480 (64%), Gaps = 9/480 (1%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI A Sbjct: 2 EKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSRGYDVFFQTGTDEHGQKIELKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + AGVT K FVD + R + D+++ SYD FIRTT+ H + ++KK+ D+GDIYKG Sbjct: 62 EEAGVTPKEFVDGVAGEIRRIWDLMNTSYDKFIRTTDGYHEKQVQKIFKKLYDQGDIYKG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y E+++ + ++ DG+ + VQ +EE YFF++S Y D+L+ + S Sbjct: 122 HYEGMYCTPCESFFTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADRLIDHINS 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+T Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPEHVVYVWLDALTNYITG 237 Query: 242 TGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GY D ++ K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H ++L Sbjct: 238 IGYDCGGDNTEQFRKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLLQG 297 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GNV+ E+++ GVDA+RYF++ E+ DG + + +R+N+DLAN +G Sbjct: 298 DGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTLG 357 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLV+R++SM K + G + G E+D + ++ + + M + A+ ++ + Sbjct: 358 NLVNRTISMTNKYFGGTVTDKGVAGEADADLKAMTESAPKAVEGKMDELRVADAITEIFN 417 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L ++Y D PW L K DR TVLY E I+ A+LL+ F+P+ + KI L Sbjct: 418 LFKRCNKYIDETMPWALAKDEEKKDRLETVLYNLQESIKAGAVLLEPFMPETSGKILGQL 477 >gi|298245336|ref|ZP_06969142.1| methionyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] gi|297552817|gb|EFH86682.1| methionyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] Length = 537 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 204/478 (42%), Positives = 297/478 (62%), Gaps = 10/478 (2%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + YI+TAI YPNA PH+GHA E +IAD+ AR+HRL G D F+TG DE+ + +AA+ A Sbjct: 25 RFYITTAIDYPNAAPHVGHALEKVIADIQARYHRLLGDDTFFSTGLDENSLHVLRAAREA 84 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 V +V FR+ LDISYD +IRTTE+ H ++++ +GDIY+ YS Sbjct: 85 NVEPHAWVAALEARFREEWRKLDISYDRWIRTTEEAHRKVAEEIFRRAWARGDIYRTTYS 144 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY +Y D+++ DG + +W+ EE YFF LS Y+D+L +Y E HP+ Sbjct: 145 GWYCPNCNNFYKDEDL---RDGHCPDHPSISPEWLNEENYFFALSRYEDQLRTYIEEHPD 201 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTF----DWGIKIPDDPQYIMYVWIDALTNYLTT 241 FI+P RR EV+ +K GL+D S+SR+ +WGI +P+DPQ ++YVW DALTNYLTT Sbjct: 202 FIVPTSRRAEVLGVIKQGLRDFSISRQVRPGLENWGIPVPEDPQQVLYVWFDALTNYLTT 261 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 G+L + + A++WPAD HVIGKDI RFH +YWPA LLSA LPLP++V HGFI +G Sbjct: 262 IGFLQDEE-RFARYWPADAHVIGKDITRFHCLYWPAILLSAGLPLPRQVAVHGFITLEGR 320 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 + SKS GNVI P +++ VG DALRY+L+R ++ DG + ++GL + N +L N +GNL Sbjct: 321 RFSKSSGNVIAPSALVDVVGSDALRYYLLRNLSLTADGNFTREGLLRAYNDELGNDLGNL 380 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 + R V +I + G IP PG+ T +E + ++ ++ + ++ RAL + V Sbjct: 381 LQRLVVLIKRFRGGTIPRPGSVTPLEEEVQALVAQGGALVGRALEEWEPGRALEEAWRCV 440 Query: 422 SEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V+ Y + +PW+L K +R TVLY E +R L++ L F+P + ++ + L Sbjct: 441 RRVNLYIEQSEPWKLAKQPGQEERLDTVLYTAAEALRLLSLWLAPFIPATSRRLREQL 498 >gi|256833172|ref|YP_003161899.1| methionyl-tRNA synthetase [Jonesia denitrificans DSM 20603] gi|256686703|gb|ACV09596.1| methionyl-tRNA synthetase [Jonesia denitrificans DSM 20603] Length = 538 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 211/488 (43%), Positives = 300/488 (61%), Gaps = 13/488 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E Y++T I Y N PHIGHAY + ADVL R+HR DV F TGTDEHG+K+ + A Sbjct: 4 ELTPFYLTTPIYYVNDAPHIGHAYTTVAADVLTRWHRQRQHDVWFLTGTDEHGEKVMRTA 63 Query: 63 QNAGVTTKVFVDQNSR-NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 GVT + + D+ + ++ + D +D DDFIRTTE+RH + ++ D+GDIY+ Sbjct: 64 HANGVTPQQWADKLVKESWLPVLDTIDARNDDFIRTTEQRHERAVQKFISQLHDQGDIYQ 123 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLL 177 G Y G Y + E Y E+ G DGQ H PV+ + E+ +FF LS Y +KLL Sbjct: 124 GSYEGPYCVGCEEYKLPSELLDGTGEFDGQKLCPLHGRPVEMLAEQNWFFNLSQYGEKLL 183 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237 + YE HPEF+ P RNEVI FVK GL+DLS+SR TFDWG+ +P DP ++MYVW DAL N Sbjct: 184 ALYEEHPEFVQPASARNEVIGFVKQGLQDLSISRSTFDWGVPVPWDPTHVMYVWFDALLN 243 Query: 238 YLTTTGY-LDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 Y+T G+ D+P + KFWPA +H++GKDILRFHA+ WPA L++A LPLP VF+HG Sbjct: 244 YITALGWGSDDPTAQERFDKFWPASVHLVGKDILRFHAVIWPAMLMAAGLPLPTTVFAHG 303 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 ++L GEK+SKS I P ++I+ G DA RY+ +R I+ G+DG + + + + NA L Sbjct: 304 WLLVGGEKMSKSKLTGIAPSDIIDHFGSDAFRYYFMRAISFGQDGSFSWEDMSAQYNAAL 363 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 ANG GNL SR +M+ K +DG +P G T+++ + V + + + RA+ Sbjct: 364 ANGWGNLASRLAAMVNKYFDGTLPQVGDLTDAEHHVHQVAATAVTNAEAAIDAISPTRAI 423 Query: 415 AQVISLVSEVDRYFDAQKPWELKK----TNP-DRASTVLYVTVEVIRQLAILLQAFVPKL 469 V +LV ++ Y Q+PW++ K T P R +T+L E +R LA+LL +P+ Sbjct: 424 EAVWTLVDALNMYITEQEPWKVAKDPEQTRPGGRLATILVTAAEGLRALAVLLNPVMPQA 483 Query: 470 ANKIFDIL 477 A+K+++ L Sbjct: 484 ASKLWESL 491 >gi|237737868|ref|ZP_04568349.1| methionyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] gi|229419748|gb|EEO34795.1| methionyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] Length = 641 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 218/520 (41%), Positives = 313/520 (60%), Gaps = 29/520 (5%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y N PH+G AY I ADV+AR+ R G D F TGTDEHGQK+ + A+ G Sbjct: 5 FYVTTPIYYVNGDPHVGSAYTTIAADVMARYKRTMGYDAYFLTGTDEHGQKVEETAKQKG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + + D + F++M L I Y DFIRTTE RH + + + KK+ + GDIYKG YSG Sbjct: 65 YTPQQWTDIMAPRFKEMWAKLGIEYSDFIRTTESRHKEAVKKILKKVYENGDIYKGEYSG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYE 181 Y + E + ++++ N H P ++ ++EE YFF++S YQD LL + + Sbjct: 125 KYCVSCETFVPENQIV--------NGNHCPDCGKELRVVKEESYFFKMSKYQDALLEHID 176 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HP+FILP RRNEV+SF+K GL+DLS+SR TF+WGI I P +I YVW DALTNYLT Sbjct: 177 KHPDFILPRSRRNEVVSFIKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTA 236 Query: 242 TGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GY +NP+ K+W +H++GKDI+RFHAI WP LLSA LP KV +HG+ + Sbjct: 237 VGYENNPEMFD-KYWNNAEVMHLLGKDIVRFHAIIWPCMLLSAGEKLPDKVVAHGWWTSE 295 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 GEK+SKS GNV+DPI IE+ GVDA RY L+RE+ G DG Y + R+N+DLAN +G Sbjct: 296 GEKMSKSKGNVVDPISEIEKYGVDAFRYCLMREVQFGNDGDYSTKSVVTRINSDLANDLG 355 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL++R++ M K + G++ + D+ I ++ + V++E+ E M +AL + Sbjct: 356 NLLNRTLGMYKKYFGGVVVNGATRDKYDDEIETLWTEVVKEVEEQMNIVQYSKALEAIWK 415 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +S +++Y D PW L K N DR + V+ V+ + + A+++ ++P A KI++ L Sbjct: 416 FISRLNKYIDETAPWTLAKDEANRDRLAVVMNHLVDGLYKAAVMVYPYMPTSAQKIWNQL 475 Query: 478 FVADENRCFQSLD-------QRLKPGFMLHKTFDPIFPRF 510 E R + L+ G +L +PIFPR Sbjct: 476 ---GETRDIHTAKVEEVMGWNLLREGHVLGNA-EPIFPRL 511 >gi|117927385|ref|YP_871936.1| methionyl-tRNA synthetase [Acidothermus cellulolyticus 11B] gi|117647848|gb|ABK51950.1| methionyl-tRNA synthetase [Acidothermus cellulolyticus 11B] Length = 539 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 220/529 (41%), Positives = 317/529 (59%), Gaps = 28/529 (5%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + Y++T I Y N PHIGHAY + ADVLAR+HR G V F TGTDEHGQK+ ++AQ Sbjct: 3 KTFYVTTPIYYVNDAPHIGHAYTTVAADVLARWHRQRGEPVWFLTGTDEHGQKVLRSAQA 62 Query: 65 AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G + + + D+ + ++ LDISYDDFIRTTE RH + +++ +KG+IY+G Sbjct: 63 GGASPQEWADRLVAEAWQPTWRELDISYDDFIRTTEPRHTGRVQAFLQRLYEKGEIYEGV 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLS 178 Y G Y + E + E+ G +G+Y Q PV + E YFFRLS Y D LL Sbjct: 123 YEGPYCVACEEFKLPGELVSG-EGEYAGQQVCPVHRRPVDQLSETNYFFRLSKYADALLD 181 Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 +Y +HPE + P RNEV+ F++ GL+DLS+SR +FDWG+KIP D + ++YVW DAL NY Sbjct: 182 HYAAHPEAVEPESARNEVMQFIRQGLQDLSISRSSFDWGVKIPWDDRQVVYVWFDALLNY 241 Query: 239 LTTTGYLDNPDGS-KAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 +T GY D PD + +A+F WPAD+H++GKDILRFHA+ WPA LL+ LPLP+KVF+HG Sbjct: 242 ITAIGY-DAPDETMRARFASTWPADVHLVGKDILRFHAVIWPAMLLAGGLPLPRKVFAHG 300 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 ++L GEK+SK+ I P ++ G DA RY+ +R G+D + + + R A+L Sbjct: 301 WLLVSGEKMSKTRLTGIAPTQLTAHFGSDAFRYYFLRSFPFGQDASFSWEEMSARYTAEL 360 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 ANG+GNL SR +M + +DG++P PG T +++ + V + V+ + M AL Sbjct: 361 ANGLGNLASRVTAMTGRYFDGVLPVPGEVTAAEQRVADVLAAVVPDADAAMDRLDFFTAL 420 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLA 470 A++ LV ++ Y Q+PW+L K + R +TVLY + +R LA+LL A +P+ Sbjct: 421 ARIWDLVLVLNGYLTEQQPWQLAKQDDGEARIRLATVLYTAADGLRALAVLLNAVMPRAC 480 Query: 471 NKIFDILFVADENRCFQSLDQR---------LKPGFMLHKTFDPIFPRF 510 +++++ L E QR L G L K DP+FPR Sbjct: 481 SRLWEQL--GAEATLGPLGSQRISDTARFGVLPAGSRLTKR-DPLFPRL 526 >gi|238852847|ref|ZP_04643252.1| methionine--tRNA ligase [Lactobacillus gasseri 202-4] gi|282852547|ref|ZP_06261889.1| methionine--tRNA ligase [Lactobacillus gasseri 224-1] gi|311111303|ref|ZP_07712700.1| methionine--tRNA ligase [Lactobacillus gasseri MV-22] gi|238834541|gb|EEQ26773.1| methionine--tRNA ligase [Lactobacillus gasseri 202-4] gi|282556289|gb|EFB61909.1| methionine--tRNA ligase [Lactobacillus gasseri 224-1] gi|311066457|gb|EFQ46797.1| methionine--tRNA ligase [Lactobacillus gasseri MV-22] Length = 658 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 209/524 (39%), Positives = 324/524 (61%), Gaps = 18/524 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + IG+AY I AD + R+ + G D F TGTDEHG KI + Sbjct: 1 MAEKKTFYITTPIFYPSGKLTIGNAYTAIAADAMTRYKKSRGFDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD+ + +++++ +LD+SYD FIRTT++ H + +++K+ +GDIY Sbjct: 61 KAEAQGIKPQEFVDKMAASYKELWKMLDVSYDRFIRTTDEDHVKAVQKIFEKLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVY+ DG + + V+ ++E YFFR+S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYRDDDGNVIGGKAPSGHEVRLVKEPSYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ HP+FILP R E+++ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 181 RLLQYYKDHPDFILPHSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK++F H Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L + K+SKS GN + P + + G+DALRY+L+R I G DG + + +RVN D Sbjct: 301 GWVLMRDGKMSKSKGNAVYPEMIAKRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+VSMI + DG + P E + ++ + E ++ M + Sbjct: 361 LANDLGNLLNRTVSMINQYQDGYVAPVAADQDEFAQDLIKTAKETIAEYQKQMDALHFSQ 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL V L+S ++Y D PW L K+ + S V+ E +R +AIL+ + + Sbjct: 421 ALDSVWKLISRANKYIDETTPWTLNKEGKSEELSKVMSNLAESLRLVAILIAPVMTQSPV 480 Query: 472 KIFDILFV-----ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 K+F+ L + A + F + D +K + + PIFPR Sbjct: 481 KMFNQLGLDWNKEAQKKLEFGAFDWDIK----VTEKPTPIFPRL 520 >gi|304386413|ref|ZP_07368746.1| methionine--tRNA ligase [Pediococcus acidilactici DSM 20284] gi|304327770|gb|EFL94997.1| methionine--tRNA ligase [Pediococcus acidilactici DSM 20284] Length = 675 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 211/524 (40%), Positives = 325/524 (62%), Gaps = 15/524 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E YI+T I YP+ + HIG++Y I D ARF RL G DV F TGTDEHG KI + Sbjct: 2 MAENNTYYITTPIYYPSGKLHIGNSYTTIACDAEARFQRLQGKDVFFLTGTDEHGLKIEQ 61 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ T + +VD ++ +++ +L+IS D FIRTT++ H + + +++K+ D+GDIY Sbjct: 62 KAEALHTTPQAYVDDMAKGIKELWKLLEISNDKFIRTTDEAHEKSVQYIFQKLLDQGDIY 121 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVY+ +G+ + N V+ ++EE YFF++S Y D Sbjct: 122 LGEYEGWYSVSDEEYFTESQLAEVYRDENGKVIGGKAPSGNEVELVKEESYFFKMSKYAD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 LL YYE HP+FI P R +E+I+ F+K GL+DL+++R +F WG+ + +DP++++YVWID Sbjct: 182 WLLDYYEKHPDFIQPASRMHEMINNFIKPGLEDLAVTRTSFKWGVPVKNDPKHVIYVWID 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D ++WPA++H++GK+I+RFH IYWP L + L +PK+++ H Sbjct: 242 ALSNYITALGYGSDDDSLFKRYWPANVHMVGKEIVRFHTIYWPIMLHALGLEMPKQIYGH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K +K+SKS GNVI P ++E+ G+DALRY+L++ + DG + + ++N D Sbjct: 302 GWLLMKDDKMSKSKGNVIYPETIVEKYGLDALRYYLLKAMPYSNDGNFTPEDFVSKINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K G+IPT E D + V + ++ +E M++ Sbjct: 362 LANDLGNLLNRTVAMINKYEGGVIPTFQSGVNEVDADLEKVAAETIKNYQELMESMHFSD 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-----TVLYVTVEVIRQLAILLQAFVP 467 ALA+V LVS ++Y D PW L + N D AS +V+ E +R +AIL+Q + Sbjct: 422 ALAEVWKLVSRSNKYIDETTPWILAR-NDDEASKQKLASVMNHLAESLRIIAILIQPVMT 480 Query: 468 KLANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 + KIF L + Q L + G + + PIFPR Sbjct: 481 QSPAKIFGQLGLDPATMELQGLHFGEIPAGTKVVEKGTPIFPRL 524 >gi|238019596|ref|ZP_04600022.1| hypothetical protein VEIDISOL_01465 [Veillonella dispar ATCC 17748] gi|237863794|gb|EEP65084.1| hypothetical protein VEIDISOL_01465 [Veillonella dispar ATCC 17748] Length = 648 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 208/515 (40%), Positives = 314/515 (60%), Gaps = 13/515 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+A+ HIGH Y +AD +ARF RL G DV F TG+DEHGQKI +AA+ Sbjct: 5 KKTYYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAAE 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + F+ + + + IS DDF+RTTEKRH + L+ K +KGDIYK Sbjct: 65 AQGITPLEYTTNIVNGFKALWEKMHISNDDFLRTTEKRHEKVVQELFTKAYEKGDIYKAE 124 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY E ++ + ++ + PV+ ++EE YFF+L+ Y D+ L + E + Sbjct: 125 YEGWYCTPCETFWTEQKL---GENHTCPDCGRPVEKVKEESYFFKLAKYTDQWLKFIEEN 181 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P R NE+I FVK GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++ Sbjct: 182 PDFIQPESRCNEMIQFVKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISALS 241 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 D K+WPADLH++GK+I+RFH I WP L+S LPLPKKVF HG+++ G K+ Sbjct: 242 PFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTKM 301 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNVIDPI +I+ G D+LRY+L+ EI G DG + ++NADL+N +GNL++ Sbjct: 302 SKSLGNVIDPIPLIDTYGADSLRYYLLSEITLGNDGNFTLPNFVTKINADLSNDLGNLLN 361 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+++MI K + G+I + D + ++ + ++ M+N +++A+ V + + Sbjct: 362 RTIAMIEKYHGGVITKCDDMDDLDRDVSTLAVQTAKDFEAAMENMELNKAIKSVWAFIGR 421 Query: 424 VDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +++Y D PW L K+ + R + +Y E +R +AI++ +P A KI+D L + Sbjct: 422 MNKYIDETMPWVLAKSEDAHDKARLQSAMYHLAEALRIIAIIVSPVIPVGAPKIWDQLGL 481 Query: 480 ADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510 +L+ G + T DPI+PRF Sbjct: 482 VGFTDA--TLEDAKVWGLIPTGTKVVKGDPIYPRF 514 >gi|184154662|ref|YP_001843002.1| methionyl-tRNA synthase [Lactobacillus fermentum IFO 3956] gi|183226006|dbj|BAG26522.1| methionyl-tRNA synthase [Lactobacillus fermentum IFO 3956] Length = 666 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 210/520 (40%), Positives = 319/520 (61%), Gaps = 11/520 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG++Y + D ARF RL G DV F TGTDEHG KI + Sbjct: 1 MAEQPTYYITTPIYYPSGRLHIGNSYTTVACDAEARFKRLSGFDVFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G + +VD+ + +++ L+I+ D FIRTT+ H T + +++++ D+GDIY Sbjct: 61 KAEKLGKDPQTYVDEMAAGIKELWQKLEITNDKFIRTTDGYHEATVQKIFQQLLDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 KG Y GWYS+ DE Y+ + EV+K +GQ + VQ ++EE YFF++S Y D Sbjct: 121 KGEYVGWYSVDDEEYFTESQLKEVFKDENGQVTGGIAPSGHEVQLVKEESYFFKMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 L+ YY++HP+FI P R NE++ +F++ GL+DL+++R +F+WG+K+P+DP++++YVWID Sbjct: 181 WLMDYYKAHPDFIQPESRMNEMVKNFLEPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L + LPLPK V H Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILHALGLPLPKHVIGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++ K K+SKS GNV+ P +I+ G+DA RY+L+R + G DG + + ++VN D Sbjct: 301 GWLTMKDGKMSKSKGNVVYPETLIDRYGLDATRYYLLRAMPFGNDGVFSPEDFVEKVNYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+M+ K G ++ PGA T+ D + V L E RE M Sbjct: 361 LANDLGNLLNRTVAMVNKYQAGKLVGQPGATTDFDADLEQVAQDALVEYRELMDQTRFAD 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + L++ ++Y D +PW L K S VL + +R +A +LQ +P Sbjct: 421 ALSAIWKLIARANKYIDETEPWVLAKDEQQAPVLSDVLTHLAKSLRMVAAMLQPIMPTAP 480 Query: 471 NKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPR 509 +I L +A E L P ++ + PIFPR Sbjct: 481 KEILGQLGLAKEAISLSDLSFNDFPAEVVVVEKGTPIFPR 520 >gi|227532988|ref|ZP_03963037.1| methionyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227189389|gb|EEI69456.1| methionyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 660 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 210/521 (40%), Positives = 318/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + Y++T I YP+ + HIG+AY I ADVLAR+ RL G DV F TGTDEHG KI + Sbjct: 1 MASKPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A GVT + +VD + + + +L+I+ D FIRTT+K H + + + +++ +GD+Y Sbjct: 61 KADKLGVTPQAYVDGMATQIKQLWKMLEITNDKFIRTTDKEHVEAVQTIVERLIKQGDVY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVY+ DG + + VQ + E YFF++S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLSEVYRDQDGNVTGGKAPSGHEVQLVHEPSYFFKMSKYTD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ H +F+ P R+ E+I+ F+K GL+DL++SR +F+WG++IP DP++++YVW+D Sbjct: 181 RLLKYYDEHLDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVD 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T GY N K+WPA++ +IGK+I+RFH IYWP L++ LPLPKK+++H Sbjct: 241 ALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALGLPLPKKIYAH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+++ K K+SKS GN I P ++E G+DALRY+L+R I G DG + + R+N D Sbjct: 301 GWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+++MI K DG++P T D+ + V L + + M Sbjct: 361 LANDLGNLLNRTIAMINKYEDGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSD 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL QV +VS ++Y D +PW L K D+ V+ E +R +A+L+Q + Sbjct: 421 ALYQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHLAESLRLIALLIQPVMTHAP 480 Query: 471 NKIFDILFVADENRCFQSLDQRLKP-GFMLHKTFDPIFPRF 510 +IF L + EN + + P G + + PIFPR Sbjct: 481 LQIFGQLGLDHENDDHKLVQWGALPAGVKVVEQGTPIFPRL 521 >gi|116628880|ref|YP_814052.1| methionyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] gi|116094462|gb|ABJ59614.1| methionyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] Length = 681 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 209/524 (39%), Positives = 324/524 (61%), Gaps = 18/524 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + IG+AY I AD + R+ + G D F TGTDEHG KI + Sbjct: 24 MAEKKTFYITTPIFYPSGKLTIGNAYTAIAADAMTRYKKSRGFDTFFLTGTDEHGLKIEQ 83 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD+ + +++++ +LD+SYD FIRTT++ H + +++K+ +GDIY Sbjct: 84 KAEAQGIKPQEFVDKMAASYKELWKMLDVSYDRFIRTTDEDHVKAVQKIFEKLLKQGDIY 143 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVY+ DG + + V+ ++E YFFR+S Y D Sbjct: 144 LGEYTGWYSVEDEEYFTESQLAEVYRDDDGNVIGGKAPSGHEVRLVKEPSYFFRMSKYAD 203 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ HP+FILP R E+++ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 204 RLLQYYKDHPDFILPHSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 263 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK++F H Sbjct: 264 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 323 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L + K+SKS GN + P + + G+DALRY+L+R I G DG + + +RVN D Sbjct: 324 GWVLMRDGKMSKSKGNAVYPEMIAKRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 383 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+VSMI + DG + P E + ++ + E ++ M + Sbjct: 384 LANDLGNLLNRTVSMINQYQDGYVAPVAADQDEFAQDLIKTAKETIAEYQKQMDALHFSQ 443 Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL V L+S ++Y D PW L K+ + S V+ E +R +AIL+ + + Sbjct: 444 ALDSVWKLISRANKYIDETTPWTLNKEGKSEELSKVMSNLAESLRLVAILIAPVMTQSPV 503 Query: 472 KIFDILFV-----ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 K+F+ L + A + F + D +K + + PIFPR Sbjct: 504 KMFNQLGLDWNKEAQKKLEFGAFDWDIK----VTEKPTPIFPRL 543 >gi|291562908|emb|CBL41724.1| methionyl-tRNA synthetase [butyrate-producing bacterium SS3/4] Length = 658 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 212/492 (43%), Positives = 311/492 (63%), Gaps = 11/492 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YISTAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI A Sbjct: 6 KKPYYISTAIAYTSGKPHIGNTYEIVLADAIARYKREQGYDVYFQTGTDEHGQKIELKAA 65 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 +AGVT K FVD + +++ D+++ SY+ FIRTT+ H + ++KK+ D+GDIYKG Sbjct: 66 DAGVTPKEFVDGVAGQIKEIWDLMNTSYNKFIRTTDDYHEKQVQKIFKKLYDQGDIYKGH 125 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ +V DG+ + PVQ +EE YFFR+S Y KL+ Y H Sbjct: 126 YEGLYCTPCESFWTPSQV---VDGKCPDCGR-PVQPAKEEAYFFRMSKYAPKLIEYINEH 181 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP+++ YVW+DALTNY+T Sbjct: 182 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVTFDPKHVTYVWLDALTNYITGI 241 Query: 243 GYL--DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY N D K+WPADLH+IGKDI+RFH IYWP FL++ LPLPK+VF H ++L Sbjct: 242 GYDCDGNSDEKFKKYWPADLHLIGKDIIRFHTIYWPIFLMALGLPLPKQVFGHPWLLQGD 301 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKS GNV+ +++ GVDA+RYF++ E+ DG D + +R+N+DLAN +GN Sbjct: 302 GKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFENDGVISWDLMVERMNSDLANILGN 361 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 LV+R+VSM K + G++ GA DE + + ++++ E M + A+ ++ ++ Sbjct: 362 LVNRTVSMTNKYFGGIVENKGAAEPVDEELKATVLETVKKVDEKMNKLRVADAITEIFNI 421 Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 ++Y D PW L K DR +TVLY E I A LL +F+P+ + KI L Sbjct: 422 FRRSNKYIDETTPWTLAKDEAKKDRLATVLYNLTEAITIGASLLFSFMPETSEKILAQL- 480 Query: 479 VADENRCFQSLD 490 E R ++++ Sbjct: 481 -NTEKRSLENMN 491 >gi|257452653|ref|ZP_05617952.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|317059192|ref|ZP_07923677.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|313684868|gb|EFS21703.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] Length = 640 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 219/519 (42%), Positives = 313/519 (60%), Gaps = 27/519 (5%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y N PH+G AY I ADV++R+ +L G +V F TGTDEHGQK+ + A+ G Sbjct: 4 FYVTTPIYYVNGDPHVGSAYTTIAADVMSRYQKLAGNNVYFLTGTDEHGQKVEQTAKEKG 63 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + + D+ + F +M L+I Y DFIRTTE+RH D+ + + K + +KGDIYKG Y G Sbjct: 64 FTPQAWTDKMAPAFTEMWKALNIHYSDFIRTTEQRHKDSVKKILKTVYEKGDIYKGEYEG 123 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y + E ++ ++++ + + + V+ EE YFFR+S YQD LL + E HP+F Sbjct: 124 QYCISCETFFPENQIVEPGHCPDCGKKLSTVK---EESYFFRMSKYQDALLKHIEEHPDF 180 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 ILP RRNEVISF+K GL+DLS+SR TF WGI I P +I YVW DALTNY+T TGY + Sbjct: 181 ILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIEFAPGHITYVWFDALTNYITATGY-E 239 Query: 247 NPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 N +W H+IGKDI+RFHAI WP LLSA + LP + +HG+ +GEK+S Sbjct: 240 NDSEKFDTYWNNARVCHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGEKMS 299 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV++P + I++ GVDA RY+L+RE G DG Y G+ RVN+DLAN +GNL++R Sbjct: 300 KSKGNVVNPYDEIKKYGVDAFRYYLLREANFGSDGDYSTKGVVGRVNSDLANDLGNLLNR 359 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 ++ M K + G I G + E + S+ + L ++ ++M RAL + +S + Sbjct: 360 TLGMYHKYFQGSIVASGNYEEIENSVHQMWEDTLTQVDKHMYYYEYSRALECIWKFISRM 419 Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++Y D PW L K T R +TV+ VE + ++A+L+ +P+ A KI+ L V + Sbjct: 420 NKYIDETMPWALAKEETQKTRLATVMNTLVESLYKIAVLVSPVIPEAAQKIWSQLGVEKD 479 Query: 483 NRCFQSLDQRLKPGFMLH--KTFD---------PIFPRF 510 + + RL LH TF+ PIFPR Sbjct: 480 IQ-----EARLSS---LHTWNTFEEKHTLGKATPIFPRI 510 >gi|256848351|ref|ZP_05553794.1| methionyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] gi|256714949|gb|EEU29927.1| methionyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] Length = 674 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 213/513 (41%), Positives = 314/513 (61%), Gaps = 11/513 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I YP+ + HIG++Y I D ARF RL G DV + TGTDEHG KI + A+ G+ Sbjct: 9 YITTPIYYPSGKLHIGNSYTTIACDAEARFKRLTGYDVFYLTGTDEHGLKIEQKAEQLGM 68 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + +VDQ + + + LDI+ D FIRTT+ H + +++++ D+GDIYKG Y+GW Sbjct: 69 KPQEYVDQMATGIKKLWKTLDITNDKFIRTTDDYHERAVQKIFQQLLDQGDIYKGKYTGW 128 Query: 128 YSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDKLLSYYE 181 YS+ DE Y+ + EVY+ +G+ + + VQ +EEE YFF++S Y D L+ YY+ Sbjct: 129 YSVDDEEYFTESQLAEVYRDDNGKVIGGKAPSGHEVQLVEEESYFFKMSKYADWLMDYYK 188 Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 HP+FI P R NE+++ F+K GL+DL+++R +F+WG+K+P+DP++++YVWIDAL+NY+T Sbjct: 189 EHPDFIEPHTRMNEMVNNFLKPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWIDALSNYIT 248 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY + + K+WPAD+H++GK+I+RFH IYWP L + LPLPK V HG++ K Sbjct: 249 ALGYGSDDNRLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHVIGHGWLTMKD 308 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKS GNVI P ++E G+DA RY+L+R + G DG + + +VN DLAN +GN Sbjct: 309 GKMSKSKGNVIYPQTLVERYGLDATRYYLLRAMPFGNDGIFSPEDFVDKVNFDLANDLGN 368 Query: 361 LVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 L++R+V+MI K G + T A T D+ + + VL E + M ALA V Sbjct: 369 LLNRTVAMINKYQGGQVQGTNTAMTPYDQDLEQTAADVLAEYSDLMDQCHFAEALASVWK 428 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L+S V++Y D +PW L K +A S V+ + +R +A LLQ +P +I L Sbjct: 429 LISRVNKYIDETEPWVLAKDEDKKAELSDVMTHLAKALRFIAALLQPTMPNAPKEILQQL 488 Query: 478 FVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509 +AD L + K PIFPR Sbjct: 489 GLADTEITLNDLSFNDFPTAATVVKKGTPIFPR 521 >gi|153811133|ref|ZP_01963801.1| hypothetical protein RUMOBE_01524 [Ruminococcus obeum ATCC 29174] gi|149832631|gb|EDM87715.1| hypothetical protein RUMOBE_01524 [Ruminococcus obeum ATCC 29174] Length = 652 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 206/477 (43%), Positives = 309/477 (64%), Gaps = 9/477 (1%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R +G DV F TGTDEHGQKI A Sbjct: 2 DKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRQEGYDVFFQTGTDEHGQKIELKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + AG+T K FVD S + + D+++ SYD FIRTT+ H + ++KK+ KGDIYKG Sbjct: 62 EEAGITPKEFVDNVSGEIKRIWDLMNTSYDKFIRTTDADHEKQVQKIFKKMYAKGDIYKG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y E+++ + ++ DG+ + P +EE YFF++S Y D+L+ Y + Sbjct: 122 HYEGMYCTPCESFFTESQL---VDGKCPDCGR-PCVPAKEEAYFFKMSKYADRLIDYINT 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HP+FI P R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+T Sbjct: 178 HPDFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 237 Query: 242 TGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GY + + S+ K WPADLH+IGKDI+RFH IYWP FL+S +LPLPK+VF H ++L Sbjct: 238 IGYDCDGESSEQFNKLWPADLHLIGKDIIRFHTIYWPIFLMSLDLPLPKQVFGHPWLLQG 297 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GNVI E+++ GVDA+RYF++ E+ DG + + +R+N++LAN +G Sbjct: 298 DGKMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSELANTLG 357 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLV+R++SM K + G++ G DE + + V ++ E M + A+ +V + Sbjct: 358 NLVNRTISMSNKYFGGVVENKGVVEPVDEDLKAFALAVPGKVAEKMDKLRVADAMTEVFT 417 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 L +++Y D PW L K DR +TVLY VE I A LL++F+P+ +I Sbjct: 418 LFKRLNKYIDETMPWALAKDEAKKDRLATVLYNLVEGITMGATLLESFMPETTERIL 474 >gi|225016542|ref|ZP_03705734.1| hypothetical protein CLOSTMETH_00449 [Clostridium methylpentosum DSM 5476] gi|224950651|gb|EEG31860.1| hypothetical protein CLOSTMETH_00449 [Clostridium methylpentosum DSM 5476] Length = 669 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 203/487 (41%), Positives = 312/487 (64%), Gaps = 13/487 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y++TAIAY + +PHIG+ YE++ AD +ARF R+ G DV F TGTDEHGQK+ A+ Sbjct: 22 KEKFYLTTAIAYASRKPHIGNTYEIVFADAVARFKRMQGYDVHFVTGTDEHGQKVEDLAK 81 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 +G++ K +VD + + + D++D +YD FIRTT+ H + ++KK+ D+GDIYK Sbjct: 82 ESGISPKQYVDSVAGEIKTIWDLMDSTYDTFIRTTDDYHERVVQKIFKKLYDQGDIYKSE 141 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + E+++ + ++ DG+ + V +EE YFF++S YQD+L+ Y E H Sbjct: 142 YQGLYCVPCESFFTETQL---VDGKCPDCGREVVP-TKEEAYFFKMSKYQDRLMEYIEQH 197 Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI P R NE++ +F+K GL+DL +SR +F WG+++ DP++++YVW+DAL NY+T Sbjct: 198 PDFIQPKSRENEMVNNFLKPGLQDLCVSRTSFTWGVQVDFDPKHVVYVWLDALVNYITAI 257 Query: 243 GYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GY +P+GS F WPADLH+IGKDILRFH IYWP FL++ +LPLPK++F H ++L Sbjct: 258 GY--DPEGSSELFEKEWPADLHIIGKDILRFHTIYWPIFLMALDLPLPKQIFGHPWLLSG 315 Query: 300 GEKISKSLGNVIDPIEVIEEVG-VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 +K+SKS+GNVI +++ + G VDA+R++L+ + +DG + + R N++LAN + Sbjct: 316 QDKMSKSVGNVIYADDLVRQFGSVDAVRFYLLSAMPYAQDGSITYENVISRFNSELANTL 375 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNLV+R+V+M+ K +DG IP P A DE + S+ + + M A+ V+ Sbjct: 376 GNLVNRTVTMVGKYFDGAIPAPTAKAPLDEELSSMAKETVAKFDGQMNALKTSDAIDTVM 435 Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 + ++Y D PW L K +R TVLY +E IR +A+LL F+P A +I Sbjct: 436 AFARRCNKYIDETMPWALAKDEAETERLGTVLYNLLEGIRFIAVLLTPFMPTTAEEILTQ 495 Query: 477 LFVADEN 483 + D + Sbjct: 496 INAPDSD 502 >gi|76799721|ref|ZP_00781816.1| methionyl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|76584925|gb|EAO61588.1| methionyl-tRNA synthetase [Streptococcus agalactiae 18RS21] Length = 475 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 200/475 (42%), Positives = 312/475 (65%), Gaps = 10/475 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ R+ G DV + TG DEHGQKI + Sbjct: 1 MTEKKSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + + + + ++LDISYD FIRTT+ H + +++++ +GDIY Sbjct: 61 KAEEAGITPQEYVDGMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE ++ + EVY+ +G + V+ + EE YFFR+S Y D Sbjct: 121 LGEYTGWYSVSDEEFFTESQLAEVYRDENGNMIGGVAPSGHEVEKVSEESYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L +YY HPEFI P R NE++ +F++ GL+DL++SR T+ WG+++P +P++++YVWID Sbjct: 181 RLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSNPKHVIYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY++ GY + D S+ KFWPAD+H+IGKDILRFH+IYWP L++ +LPLPK++ + Sbjct: 241 ALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMALDLPLPKRLVA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + + K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 +LAN +GNL++R+++M+ K +DG +P T+ D + SV + ++ + M+ R Sbjct: 361 ELANDLGNLLNRTIAMVNKYFDGEVPRFAVATDFDADLASVATDSIENYHKQMEAVDFPR 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAF 465 AL V +L+S ++Y D PW L K T+ D+ + V+ V +R +A L+Q F Sbjct: 421 ALEAVWNLISRTNKYIDETAPWVLAKDETDRDKLAAVMSHLVASLRVVAHLIQPF 475 >gi|289422845|ref|ZP_06424678.1| methionine--tRNA ligase [Peptostreptococcus anaerobius 653-L] gi|289156755|gb|EFD05387.1| methionine--tRNA ligase [Peptostreptococcus anaerobius 653-L] Length = 647 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 212/518 (40%), Positives = 328/518 (63%), Gaps = 13/518 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ Y++T I YP+ + HIGHAY I AD +ARF R G DV F TGTDEHG+KI K Sbjct: 1 MTKKPTFYVTTPIYYPSGKLHIGHAYTTIAADAIARFKRFCGYDVRFLTGTDEHGEKIQK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK-RHHDTCRILWKKISDKGDI 119 AQ AG++ F+D + + + + L+IS DDFIRTT+K RH + ++ K+ ++GDI Sbjct: 61 KAQEAGMSEIEFLDAQIADIKKLWEKLEISNDDFIRTTDKERHEVIIQKIFTKLYEQGDI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 YKG Y G Y + E+++ + ++ DG + ++EE YFFRLS YQD++ Sbjct: 121 YKGSYEGNYCVPCESFWTESQM---IDGHKCPDCGRETKIVKEESYFFRLSKYQDRIRDL 177 Query: 180 YESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 +E + +F+LP R+NE+I +F+ GL+DLS++R +FDWGIK+P D +++YVWIDAL NY Sbjct: 178 FE-NTDFVLPESRKNEMIKNFIDPGLEDLSVTRTSFDWGIKVPFDEDHVIYVWIDALCNY 236 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 +T+ GY+ D +WPA++ ++ K+I+RFH I WPA L++ +LPLP++VF HG+IL Sbjct: 237 ITSLGYMSEDDSKFKNYWPANVQLVAKEIVRFHTIIWPALLMALDLPLPQRVFGHGWILF 296 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 +K+SKS GN++ P +++++ GVDAL+YFL+RE + G+DG Y R+N+DLAN + Sbjct: 297 ADDKMSKSKGNIVYPGQMVDKYGVDALKYFLLREFSFGQDGSYTHRNFITRINSDLANDL 356 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNLVSR+VSM+ K DG++ A TE D+ ++++ + + + M + + H AL V Sbjct: 357 GNLVSRTVSMVEKYNDGILVVNDAKTEFDDELINLYKEIRVDFEKQMNDLMFHEALESVW 416 Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 V ++Y D PW L K + D+ + VLY E IR ++ L+ + +P A KIF Sbjct: 417 RFVRRTNKYIDETMPWALAKDDSKKDQLNHVLYNLCESIRLISTLISSLLPDTARKIFYQ 476 Query: 477 LFVA--DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 L + +E ++S D + G +H+ + +FPR Sbjct: 477 LGIEGFEELTNWESTDTFGLIADGTKVHRG-EVLFPRL 513 >gi|293399763|ref|ZP_06643909.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306163|gb|EFE47406.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 656 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 215/517 (41%), Positives = 328/517 (63%), Gaps = 17/517 (3%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ K YI+TAI Y + +PHIG+ YE+++ D +AR+ R G DV F TGTDEHGQKI + A Sbjct: 6 KKGKYYITTAITYTSGRPHIGNTYEIVLTDAIARYKRQQGYDVFFQTGTDEHGQKIEEKA 65 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + AGVT K FVD+ + R D+++ SYD F+RTT++ H + ++KK+ ++GDIYKG Sbjct: 66 KEAGVTPKEFVDKVADIVRKNFDMMNTSYDYFVRTTDEGHERQVQKIFKKLYEQGDIYKG 125 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y E+++ + ++ DG+ + PVQ EE YFF L Y KL+ + E Sbjct: 126 KYEGMYCTPCESFWTESQL---IDGKCPDCGR-PVQKATEEAYFFNLQKYAPKLIKHIEE 181 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEFI P R+NE+I+ F+K GL+DL +SR +F WGI + DP +++YVWIDAL+NY+T+ Sbjct: 182 HPEFIQPESRKNEMINNFLKPGLQDLCVSRTSFKWGIPVDFDPDHVVYVWIDALSNYITS 241 Query: 242 TGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 GY + DG+ K+WPAD+H+IGKDILRFH IYWP L++ PLPK+VF H ++L Sbjct: 242 LGY--DADGNHGENYKKYWPADVHIIGKDILRFHTIYWPIMLMALGEPLPKQVFGHPWLL 299 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 K+SKS GN I E++ GVDA+RYF++ E+ +DG D + +R+N+DLAN Sbjct: 300 VGDGKMSKSKGNAIYADELVHYFGVDAVRYFVLHEMPFAQDGTITWDLMVERINSDLANV 359 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 +GNLV+R++SM K ++G+I P + D+ ++ + + + + M+ + A+ ++ Sbjct: 360 LGNLVNRTISMQNKYFNGVISNPLECEDIDKELIDLALDTPKRVAKKMETLHVGDAIEEI 419 Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 +L+ ++Y D PW L K + DR +TVLY +E IR A+LL +F+P+ A KI D Sbjct: 420 FTLLKRCNKYIDETTPWVLGKDESKKDRLATVLYNLLESIRIAAVLLSSFMPETAEKILD 479 Query: 476 ILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 L ++ R +SL++ L+ G + + +F R Sbjct: 480 ELSTSE--RSAESLEEFGNLECGHTVDAKPEILFARI 514 >gi|33303707|gb|AAP22261.1| methionyl-tRNA synthetase [Bacillus cereus] Length = 418 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 192/418 (45%), Positives = 289/418 (69%), Gaps = 10/418 (2%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K A+ +T + +VD Sbjct: 1 HIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNITPQAYVDNIVAGI 60 Query: 81 RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND-- 138 +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Y GWYS++DE +Y + Sbjct: 61 KELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQ 120 Query: 139 --DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193 D + +G G+ ++ H+ V+ + EE YFFR+ Y D+LL +YE +P FI P R+ Sbjct: 121 LVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVDRLLKFYEDNPHFIQPESRK 179 Query: 194 NEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252 NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+DAL+NY+T GY + Sbjct: 180 NEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTANEEKY 239 Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312 KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+HG+IL K K+SKS GNV+D Sbjct: 240 KKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVD 299 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 P+ +I+ G+DALRY+L+RE+ G DG + +G +R+N DLAN +GNL++R+V+MI K Sbjct: 300 PVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKY 359 Query: 373 YDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 ++G IP TE DE++++ L+++ E M+N AL + LVS ++Y D Sbjct: 360 FNGEIPAFKENVTEFDETLVAFAQDTLKKVEEAMENMEFSVALGSIWQLVSRTNKYID 417 >gi|270290915|ref|ZP_06197139.1| methionyl-tRNA synthetase [Pediococcus acidilactici 7_4] gi|270280975|gb|EFA26809.1| methionyl-tRNA synthetase [Pediococcus acidilactici 7_4] Length = 675 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 207/523 (39%), Positives = 325/523 (62%), Gaps = 13/523 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E YI+T I YP+ + HIG++Y I D ARF RL G DV F TGTDEHG KI + Sbjct: 2 MAENNTYYITTPIYYPSGKLHIGNSYTTIACDAEARFQRLQGKDVFFLTGTDEHGLKIEQ 61 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ T + +VD ++ +++ +L+IS D FIRTT++ H + + +++K+ D+GDIY Sbjct: 62 KAEALHTTPQAYVDDMAKGIKELWKLLEISNDKFIRTTDEAHEKSVQYIFQKLLDQGDIY 121 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVY+ +G+ + N V+ ++EE YFF++S Y D Sbjct: 122 LGEYEGWYSVSDEEYFTESQLAEVYRDENGKVIGGKAPSGNEVELVKEESYFFKMSKYAD 181 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 LL YYE HP+FI P R +E+I+ F+K GL+DL+++R +F WG+ + +DP++++YVWID Sbjct: 182 WLLDYYEKHPDFIQPASRMHEMINNFIKPGLEDLAVTRTSFKWGVPVKNDPKHVIYVWID 241 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D ++WPA++H++GK+I+RFH IYWP L + L +PK+++ H Sbjct: 242 ALSNYITALGYGSDDDSLFKRYWPANVHMVGKEIVRFHTIYWPIMLHALGLEMPKQIYGH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K +K+SKS GNVI P ++E+ G+DALRY+L++ + DG + + ++N D Sbjct: 302 GWLLMKDDKMSKSKGNVIYPETIVEKYGLDALRYYLLKAMPYSNDGNFTPEDFVSKINFD 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K G+IPT E D + V + ++ +E M++ Sbjct: 362 LANDLGNLLNRTVAMINKYEGGVIPTFQSGVNEVDADLEKVAAETIKNYQELMESMHFSD 421 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA----STVLYVTVEVIRQLAILLQAFVPK 468 ALA+V LVS ++Y D PW L + + + + ++V+ E +R +AIL+Q + + Sbjct: 422 ALAEVWKLVSRSNKYIDETTPWILARNDDEESKQKLASVMNHLAESLRIIAILIQPVMTQ 481 Query: 469 LANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 KIF L + Q L + G + + PIFPR Sbjct: 482 SPAKIFGQLGLDPATMELQGLHFGEIPAGTKVVEKGTPIFPRL 524 >gi|319936629|ref|ZP_08011042.1| methionine-tRNA ligase [Coprobacillus sp. 29_1] gi|319808186|gb|EFW04751.1| methionine-tRNA ligase [Coprobacillus sp. 29_1] Length = 640 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 206/482 (42%), Positives = 316/482 (65%), Gaps = 13/482 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 MK + Y++TAI Y + +PHIG+ YE+I+AD +AR R +G +V F TGTDEHGQKI Sbjct: 1 MKNPKDYYLTTAITYTSGKPHIGNTYEIILADAIARSKRQEGYNVYFQTGTDEHGQKIEL 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ AG+ K FVD+ + +++ D++D SYD F+RTT++ H + ++KK+ D+GDIY Sbjct: 61 KAQEAGIPPKQFVDEKAAVVKNIWDLMDSSYDKFMRTTDEYHIKQVQKIFKKLYDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 G Y G Y E+++ + ++ DG+ + PV +EE YFF+LS Y D+L+ + Sbjct: 121 LGHYEGKYCTACESFFTESQL---VDGKCPDC-GGPVHDAKEEAYFFKLSKYADRLIQHI 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 E+HPEFI P+ R+NE+++ F+K GL+DL +SR TF W I + DP++++YVWIDALTNY+ Sbjct: 177 ENHPEFIQPVSRKNEMMNNFLKPGLQDLCVSRTTFTWSIPVDFDPKHVVYVWIDALTNYI 236 Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 T GY + DG+ ++WPADLH+IGKDI+RFH IYWP L++ ++PLPK+VF H + Sbjct: 237 TGLGY--DVDGNHGELYKRYWPADLHLIGKDIVRFHTIYWPIMLMALDIPLPKQVFGHPW 294 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L K+SKS GNVI ++++ GVDA+RY+++ EI DG D L +R+N+DLA Sbjct: 295 LLQGESKMSKSKGNVIYADDLVQIFGVDAVRYYVLHEIPYDNDGSITWDLLVERINSDLA 354 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N +GNLV+R+++M K +DG++ P + E D+ + + + +++++ M +AL Sbjct: 355 NILGNLVNRTIAMTNKYFDGVVTNPEVYEEVDDELKQIALAMPKKVQDLMDEFKASKALD 414 Query: 416 QVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ L+ ++Y D PW L K +R +TVLY +E IR AI L+ F+P + KI Sbjct: 415 EIFVLLRRTNKYIDDTMPWALAKETDKQERLATVLYNLIEAIRFAAIALEPFMPSTSTKI 474 Query: 474 FD 475 D Sbjct: 475 LD 476 >gi|315651952|ref|ZP_07904954.1| methionine--tRNA ligase [Eubacterium saburreum DSM 3986] gi|315485781|gb|EFU76161.1| methionine--tRNA ligase [Eubacterium saburreum DSM 3986] Length = 652 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 215/522 (41%), Positives = 321/522 (61%), Gaps = 32/522 (6%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAIAY + +PHIG+ YE+++AD +ARF R +GL+V F TGTDEHGQKI A++AG+ Sbjct: 7 YITTAIAYASGKPHIGNTYEIVLADAIARFRREEGLEVFFQTGTDEHGQKIENKAKDAGI 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K +VD + R + D+++ SYD FIRTT++ H + ++KK D+GDIYKGCY G Sbjct: 67 TPKEYVDNAAGQIRKIWDLMNTSYDKFIRTTDEDHKKQVQKIFKKFYDQGDIYKGCYEGM 126 Query: 128 YSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y E+++ D ++ G G Y A+ EE YFF++S Y D+L+ Y H Sbjct: 127 YCTACESFFTDSQLVDGKCPDCGGDVYPAK--------EEAYFFKMSKYADRLIKYINEH 178 Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEFI P+ R+NE++ +F+ GL+DL +SR +F WGI + DP+++ YVW+DAL+NY+T Sbjct: 179 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVEFDPKHVTYVWLDALSNYITGI 238 Query: 243 GYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 GY + DG+ + +FWPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L Sbjct: 239 GY--DVDGNSSERFKRFWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQ 296 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K+SKS GNVI +++ GVDA+RYF++ E+ DG + + +R N+DLAN + Sbjct: 297 GDGKMSKSKGNVIYADTLVDFFGVDAVRYFVLHEMPFDNDGVISWELMVERFNSDLANVL 356 Query: 359 GNLVSRSVSMILKDYDGMI------PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 GNLVSR++SM K +DG++ GA E D + V ++++ M + Sbjct: 357 GNLVSRTISMTNKYFDGVLTDTKDESVAGAM-EVDTDLKDVALMTVEKVVRKMSELRVAD 415 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 A++++ +L ++Y D PW L K R TVLY E I A LL +F+P+ + Sbjct: 416 AISEIWTLFKRCNKYIDETTPWILAKEEDKKSRLQTVLYNLAESISIGATLLYSFMPETS 475 Query: 471 NKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 KI + + R + +++ L G L K + +F R Sbjct: 476 EKILE--YFGTNKRSLEDMNKFGLLMSGTTLAKDPEILFKRL 515 >gi|302672159|ref|YP_003832119.1| methionyl-tRNA synthetase MetG [Butyrivibrio proteoclasticus B316] gi|302396632|gb|ADL35537.1| methionyl-tRNA synthetase MetG [Butyrivibrio proteoclasticus B316] Length = 679 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 214/497 (43%), Positives = 312/497 (62%), Gaps = 12/497 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M+ + K YI+TAIAY + +PHIG++YE+++AD +AR+ R DG DV F TG+DEHGQKI Sbjct: 1 MQNKGKYYITTAIAYTSGKPHIGNSYEIVLADAIARYKRRDGFDVHFQTGSDEHGQKIET 60 Query: 61 AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A AG + K FVDQ S + + +++D SYD FIRTT+ H + ++K+ D+GDI Sbjct: 61 RAIEAGCASPKEFVDQVSDTIKGLWNLMDTSYDRFIRTTDDDHVKQVQKIFKRFYDQGDI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 YKG Y G Y EA+Y + ++ G + PV EEE YFF++S Y DKL+ Y Sbjct: 121 YKGSYKGMYCTECEAFYTESQLKDGKCPEC----GGPVHPAEEEAYFFKMSKYADKLIDY 176 Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 +HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + D ++++YVW+DAL+NY Sbjct: 177 INTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALSNY 236 Query: 239 LTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 +T GY S+ K+WPADLH+IGKDI+RFH IYWP FL++ PLPK++F H ++ Sbjct: 237 ITGIGYDAEGHSSEEYKKWWPADLHLIGKDIIRFHTIYWPIFLMALGEPLPKQIFGHPWL 296 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L GEK+SKS GNVI +++ GVD +RYF++ E+ DG + L +R N+DLAN Sbjct: 297 LQGGEKMSKSKGNVIYADDLVSLFGVDPVRYFVLHEMPFENDGVITWELLVERFNSDLAN 356 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNLV+R+++M K G++ G + D + +V + ++ + M + AL + Sbjct: 357 TLGNLVNRTIAMSNKYLGGVVADKGVTEDVDADLKAVVTSCYDKVEKKMDELRVADALTE 416 Query: 417 VISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + +L ++Y D +PW L K + DR STVLY VE I A LL F+P+ A KI Sbjct: 417 IFTLFKRCNKYIDETEPWVLGKDESKKDRLSTVLYNLVESISIGAALLDPFMPETAQKIR 476 Query: 475 DILFVADENRCFQSLDQ 491 + L + R F SL Q Sbjct: 477 EQLNAPE--REFDSLGQ 491 >gi|86606068|ref|YP_474831.1| methionyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab] gi|86554610|gb|ABC99568.1| methionyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab] Length = 516 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 202/470 (42%), Positives = 291/470 (61%), Gaps = 7/470 (1%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+T I Y NA PHIG AY + AD +AR+HRL G DVL TGTDEHGQKI + A+ G+ Sbjct: 8 ITTPIYYVNAAPHIGSAYTTLAADAIARYHRLRGKDVLMVTGTDEHGQKIQRTAEERGLP 67 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D+ + F + +LDI YD FIRTT+ RH R ++++ D+GDI+ G GWY Sbjct: 68 PQQHCDEIAAQFAQLWQLLDIRYDRFIRTTDPRHKAIVREFFQRVWDRGDIFVGRQQGWY 127 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + ++ E+ +G + + V+W +EE YFFRLS YQ+KL + Y HPEFI Sbjct: 128 CVACEEFKDESELLEGGFCPLH--PNKKVEWKDEENYFFRLSRYQEKLEALYAEHPEFIQ 185 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT-GYLDN 247 P RRNEVI+FVK GL+D S+SR + WGI P DP +YVW DAL NYL+ D Sbjct: 186 PESRRNEVINFVKQGLRDFSISRPSVSWGIPFPADPSQTLYVWFDALINYLSAAVDPEDE 245 Query: 248 PDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 P A ++WPAD+H++GKDI+RFHAIYWPA L+SA LPLP+++F HGF+ G K+ K Sbjct: 246 PTLENALRRYWPADVHLVGKDIVRFHAIYWPAMLMSAGLPLPRQIFGHGFLTKDGLKMGK 305 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGN +DP E+++ G DA+RY+ + EI GKDG + + + +NADLAN +GNL++R+ Sbjct: 306 SLGNTLDPFELVQRYGADAVRYYFLTEIELGKDGDFSEGRFIEVLNADLANDLGNLLNRT 365 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 ++M LK Y P +D + ++ R+ + + + A + +SL + Sbjct: 366 LNM-LKKYQPDYRIPAVEIPADHPLKTLAERLAPTVADAYERLDPSSAARKALSLAQASN 424 Query: 426 RYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +Y D Q PW L K+ ++ + +LY +E +R +A+ L +P L+ KI Sbjct: 425 KYLDEQAPWTLHKQGQSEQVAQILYAVLESVRWVAVALSPIIPNLSLKIL 474 >gi|257463198|ref|ZP_05627597.1| methionyl-tRNA synthetase [Fusobacterium sp. D12] gi|317060786|ref|ZP_07925271.1| methionyl-tRNA synthetase [Fusobacterium sp. D12] gi|313686462|gb|EFS23297.1| methionyl-tRNA synthetase [Fusobacterium sp. D12] Length = 646 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 215/516 (41%), Positives = 315/516 (61%), Gaps = 16/516 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y N PH+G AY I +DV+AR+ +L G V F TGTDEHGQK+ + A G Sbjct: 4 FYVTTPIYYVNGDPHVGSAYTTIASDVMARYQKLAGKTVYFLTGTDEHGQKVEQTAHEKG 63 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + + D+ + F +M L+I Y DFIRTTE RH + + + K + DKGDIYKG Y G Sbjct: 64 FTPQAWTDKMAPAFTEMWKALNIKYSDFIRTTEPRHKNAVKKILKAVYDKGDIYKGEYEG 123 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y + E ++ ++++ + + + V+ EE YFF++S YQ+ LL + E HP+F Sbjct: 124 QYCISCETFFPENQIVEPGHCPDCGKKLSTVK---EESYFFKMSKYQEALLQHIEEHPDF 180 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 ILP RRNEVISF+K GL+DLS+SR TF WGI I P +I YVW DALTNYLT GY + Sbjct: 181 ILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIEFAPGHITYVWFDALTNYLTAVGYEN 240 Query: 247 NPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 +P+ + + A + H+IGKDI+RFHAI WP LLSA + LP + +HG+ +GEK+SK Sbjct: 241 DPEKFETYWNHARVCHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGEKMSK 300 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S GNV++P + I++ GVDA RY+L+RE G DG Y G+ R+N+DLAN +GNL++R+ Sbjct: 301 SKGNVVNPYDEIKKYGVDAFRYYLLREANFGSDGDYSTKGIIGRINSDLANDLGNLLNRT 360 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 + M K + G I + G E + + + L ++ +M +AL + +S ++ Sbjct: 361 LGMYHKYFQGKIVSSGEIQEIEIDVYKLWEDTLSQVETHMYYYEYSKALEVIWKFISRMN 420 Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-- 481 +Y D PW L K T R +TV+ +E + ++A+L+ F+P+ A KI++ L +++ Sbjct: 421 KYIDETMPWALAKEETQQKRLATVMNTLLESLYKIAVLVSPFIPEAAQKIWNQLGISEDI 480 Query: 482 ENRCFQSLD------QRLKP-GFMLHKTFDPIFPRF 510 E QSL + + P G L K +PIFPR Sbjct: 481 EKAQLQSLHCDVSVFESIFPIGHDLGKA-NPIFPRI 515 >gi|238855586|ref|ZP_04645888.1| methionine--tRNA ligase [Lactobacillus jensenii 269-3] gi|260664778|ref|ZP_05865629.1| methionyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|282932728|ref|ZP_06338136.1| methionine--tRNA ligase [Lactobacillus jensenii 208-1] gi|313472661|ref|ZP_07813150.1| methionine--tRNA ligase [Lactobacillus jensenii 1153] gi|238831803|gb|EEQ24138.1| methionine--tRNA ligase [Lactobacillus jensenii 269-3] gi|239529379|gb|EEQ68380.1| methionine--tRNA ligase [Lactobacillus jensenii 1153] gi|260561261|gb|EEX27234.1| methionyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|281303138|gb|EFA95332.1| methionine--tRNA ligase [Lactobacillus jensenii 208-1] Length = 662 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 204/518 (39%), Positives = 321/518 (61%), Gaps = 9/518 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + IG+AY I AD +AR+ R G D F TGTDEHG KI + Sbjct: 1 MADKKTFYITTPIYYPSGRLTIGNAYTTIAADSMARYKRSQGYDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+ + +VD ++ ++++ LDISYD FIRTT+ H + + +++K+ +GDIY Sbjct: 61 KAEKAGIKPQEYVDNMAKQYKELWKKLDISYDKFIRTTDADHVKSVQKIFEKLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EV+K +G+ + VQ ++E YFFR+S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLKEVFKDDNGKVIGGIAPSGHKVQLVKEPSYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ +P+FILP R E+++ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 181 RLLKYYKENPDFILPHSREKEMVNNFIKPGLEDLSVTRTTIDWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D KFWPAD+H++GK+I+RFH IYWP L++ +LPLPK++F H Sbjct: 241 ALSNYITALGYGSDDDSLFKKFWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L +K+SKS GN + P +++ G+DALRY+L+R I G DG + + +RVN D Sbjct: 301 GWVLIYKDKMSKSKGNAVYPESIVDRFGLDALRYYLMRAIPFGSDGSFSPEDFVERVNFD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 LAN +GNL++R+VSMI + G++ P + + + + + E ++ M +A Sbjct: 361 LANDLGNLLNRTVSMINQYQAGLVTKPASQDDLGSDLAKAANETVVEYQKQMDALHFSQA 420 Query: 414 LAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 L + V ++Y D PW L K+ + + V+ E +R +AI++ + + K Sbjct: 421 LDAIWKFVGRANKYIDETTPWVLNKEGKTEELARVMANLAESLRLIAIMISPIMTESPAK 480 Query: 473 IFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509 IF L + E+ ++L+ + + PIFPR Sbjct: 481 IFTQLGLNFEDETQKALEFGAFAWNIKVTEKPTPIFPR 518 >gi|33303699|gb|AAP22257.1| methionyl-tRNA synthetase [Bacillus cereus] Length = 416 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 192/416 (46%), Positives = 289/416 (69%), Gaps = 10/416 (2%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K A+ VT + +VD Sbjct: 1 HIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNVTPQAYVDNIVAGI 60 Query: 81 RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND-- 138 +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Y GWYS++DE +Y + Sbjct: 61 KELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQ 120 Query: 139 --DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193 D + +G G+ ++ H+ V+ + EE YFFR+ Y D+LL +YE +P FI P R+ Sbjct: 121 LVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVDRLLKFYEENPHFIQPESRK 179 Query: 194 NEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252 NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+DAL+NY+T GY + Sbjct: 180 NEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTENEEMY 239 Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312 KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+HG+IL K K+SKS GNV+D Sbjct: 240 KKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVD 299 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 P+ +I+ G+DALRY+L+RE+ G DG + +G +R+N DLAN +GNL++R+V+MI K Sbjct: 300 PVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKY 359 Query: 373 YDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 ++G IP TE DE++++ L+++ E M+N AL+ + LVS ++Y Sbjct: 360 FNGEIPAFKENVTEFDETLVTFAKDTLKKVEEAMENMEFSVALSSIWQLVSRTNKY 415 >gi|160939618|ref|ZP_02086966.1| hypothetical protein CLOBOL_04510 [Clostridium bolteae ATCC BAA-613] gi|158437409|gb|EDP15173.1| hypothetical protein CLOBOL_04510 [Clostridium bolteae ATCC BAA-613] Length = 683 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 209/481 (43%), Positives = 315/481 (65%), Gaps = 19/481 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+TAIAY + +PHIG+ YE+I+AD +AR+ R G DV F TGTDEHGQKI + A+ Sbjct: 25 KKPYYITTAIAYASGKPHIGNTYEIILADSIARYKREQGYDVFFQTGTDEHGQKIEEKAE 84 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AGVT + FVD+ + + + D+++ SYD FIRTT++ H + ++KK+ D+GDIYKG Sbjct: 85 AAGVTPQEFVDKAAAEIKRIWDLMNTSYDKFIRTTDQDHEAQVQKIFKKLYDQGDIYKGY 144 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ DG+ + V+ +EE YFFR+S Y +L+ Y H Sbjct: 145 YEGLYCTPCESFFTESQL---VDGKCPDCGRE-VKPAKEEAYFFRMSKYAPRLIEYINEH 200 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEFI P+ R+NE+++ F+ GL+DL +SR TF WGI + DP+++ YVW+DALTNY+T Sbjct: 201 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTTFSWGIPVDFDPKHVTYVWLDALTNYITGI 260 Query: 243 GYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 GY + DGS K+WPADLH+IGKDI+RFH IYWP FL++ ++PLPK+VF H ++L Sbjct: 261 GY--DCDGSSTDQFKKYWPADLHLIGKDIIRFHTIYWPIFLMALDVPLPKQVFGHPWLLQ 318 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K+SKS GNV+ +++ GVDA+RYF++ E+ DG + + +R+N+DLAN + Sbjct: 319 GDGKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVISWELMVERMNSDLANIL 378 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE---NMQNQLIHRALA 415 GNLV+R++SM K +DG++ G E+DE + V VL+E+++ M+ + A+ Sbjct: 379 GNLVNRTISMSNKYFDGVVCDKGVCGEADEDLKKV---VLEEVKKADAKMEQLRVADAMT 435 Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ ++ ++Y D PW L K + DR +TVLY E I A LL +F+P+ A KI Sbjct: 436 EIFNIFRRCNKYIDETTPWTLAKDESQKDRLATVLYNLTEAIAIGASLLYSFMPETAEKI 495 Query: 474 F 474 Sbjct: 496 L 496 >gi|116492070|ref|YP_803805.1| methionyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] gi|116102220|gb|ABJ67363.1| methionyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] Length = 673 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 209/523 (39%), Positives = 319/523 (60%), Gaps = 13/523 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E YI+T I YP+ + HIG++Y I D ARF RL+G DV F TGTDEHG KI + Sbjct: 1 MAENNTYYITTPIYYPSGKLHIGNSYTTIACDAEARFQRLEGKDVFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ T K +VD + + + + D+L+I+ D FIRTT+ H + +++K+ D+GDIY Sbjct: 61 KAEALNTTPKAYVDGMAEDIKKLWDLLEITNDKFIRTTDDYHEKAVQKIFQKLLDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVY+ ADG + N V+ ++EE YFF++S Y D Sbjct: 121 LGEYEGWYSVSDEEYFTESQLAEVYRDADGNVTGGKAPSGNEVELVKEESYFFKMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 LL YY++HP FI P R NE+I+ F+K GL+DL+++R F WG+ I +DP++++YVWID Sbjct: 181 WLLDYYQTHPNFIQPASRMNEMINNFIKPGLEDLAVTRTGFKWGVPIKNDPKHVIYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + DG+ KFWPA++H++GK+I+RFH IYWP L + L P +++ H Sbjct: 241 ALSNYITALGYSSDEDGNFKKFWPANVHMVGKEIVRFHTIYWPIMLHALGLEQPDQIYGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNVI P +++ G+DALRY+L++ + G DG + + ++N D Sbjct: 301 GWLLMKDSKMSKSKGNVIYPETIVKNYGLDALRYYLLKAMPYGNDGNFTPEDFISKINFD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K G+IPT + D + + + ++ + M N Sbjct: 361 LANDLGNLLNRTVAMINKYEGGVIPTFQSGVNDVDVDLETTAATTIKNYEDLMNNLHFAD 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA----STVLYVTVEVIRQLAILLQAFVPK 468 ALA++ LV+ ++Y D PW L + + D + ++V+ E +R +AIL+Q + + Sbjct: 421 ALAEIWKLVARTNKYIDETTPWILARNDDDESKQKLASVMNHLAESLRVIAILIQPMMTQ 480 Query: 469 LANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 KIF L + Q L + + + PIFPR Sbjct: 481 SPAKIFAQLGLDVNQLELQGLKFGEIPADTKVVEKGTPIFPRL 523 >gi|152992719|ref|YP_001358440.1| methionyl-tRNA synthetase [Sulfurovum sp. NBC37-1] gi|151424580|dbj|BAF72083.1| methionyl-tRNA synthetase [Sulfurovum sp. NBC37-1] Length = 649 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 215/514 (41%), Positives = 319/514 (62%), Gaps = 21/514 (4%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I Y N HIGHAY IIAD LAR+ R+ GLD F TGTDEHGQKI ++A+ Sbjct: 7 KAYITTPIYYVNDIAHIGHAYTTIIADTLARYSRMSGLDTFFLTGTDEHGQKIEESAKAR 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T++ + D+ S F+++ D ISYD FIRTT+ H + +K + D GDIYK Y Sbjct: 67 GKTSQEYADEISATFKNLWDDFGISYDKFIRTTDADHMKGVQKAFKVMYDNGDIYKDVYK 126 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y + E ++ + ++ DG++ P +EEE YFF+LSAY+DKLL++Y +P Sbjct: 127 GHYCISCETFFPESQL---VDGEFCPECGKPTTIVEEESYFFKLSAYEDKLLAWYNDNPN 183 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTT 242 ILP +RNEVI FV+ GL DLS++R +FDWG+K+P +DP+++MYVW+DAL NY+T Sbjct: 184 CILPKSKRNEVIRFVEGGLDDLSITRTSFDWGVKLPAELNDPKHVMYVWLDALMNYVTAL 243 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY D +K FWPA +H+IGKDILRFHAIYWPAFL+S L +PK + +HG+ GEK Sbjct: 244 GY--GTDEAKMDFWPARVHLIGKDILRFHAIYWPAFLMSLGLEMPKHIAAHGWWTRDGEK 301 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV++P EV + G+D RYF++RE+ G DG + + L R+N+DL N +GNL+ Sbjct: 302 MSKSKGNVVNPREVADAYGLDNFRYFMLREVPFGGDGDFSQKALIDRINSDLGNDLGNLL 361 Query: 363 SRSVSMILKDYDGMIPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 +R + M K ++G + + TE DE +S L+++ + + IHR L ++ Sbjct: 362 NRLIGMSGKYFEGKVDSANVSKYYQTELDEVDIS-----LEKLEPLLFDMQIHRYLEELW 416 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDIL 477 +S ++ D +PW L K + + L + ++ +++++L +P + KI L Sbjct: 417 RPLSVANKAIDKYQPWTLMKEGKEGEAMALNGLIANILAKVSVMLYPVMPVICPKIATAL 476 Query: 478 FVADENRCFQSL--DQRLKPGFMLHKTFDPIFPR 509 + +N + SL +++L F + K P+FPR Sbjct: 477 SFSIDNASWNSLIKEKQLLETFTIEK-IPPLFPR 509 >gi|288818060|ref|YP_003432408.1| methionyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|288787460|dbj|BAI69207.1| methionyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|308751661|gb|ADO45144.1| methionyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] Length = 490 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 208/472 (44%), Positives = 300/472 (63%), Gaps = 17/472 (3%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I Y N PHIGHAY + ADVLARF+R G V F TGTDEHG KI K+AQ Sbjct: 2 KFYITTPIYYVNDVPHIGHAYTTVAADVLARFYRQRGYSVFFLTGTDEHGLKIQKSAQER 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G++ K DQN+ NF+ + ++ISYD FIRTT++ H + ++ K + GDIYKG Y Sbjct: 62 GISPKELADQNAENFKKLWKFMNISYDRFIRTTDEEHIKFVQEVFVKSYENGDIYKGEYE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY + E + + E+ +G P ++++E YFFRLS Y+++L+ YE H + Sbjct: 122 GWYCVGCEEFKPESEL---LEGNICPVHLKPCEYVKEPSYFFRLSKYEEELIRLYEWHKD 178 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTF--DWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 FI+P RRNEVISFVK GLKDLS++R + WGI++P D + +YVW DAL NY++ Sbjct: 179 FIMPEYRRNEVISFVKQGLKDLSITRPSVRVKWGIEVPFDREQTIYVWFDALFNYISAL- 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 D P +WPADLH++GKDILRFHA+YWPAFL+S +PK +F+HG+ +G+K+ Sbjct: 238 -YDRPH-----YWPADLHLVGKDILRFHAVYWPAFLMSVGYQVPKSIFAHGWWKVEGKKM 291 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNVIDP +++++ G+D +RYFL+RE+ G+DG ++GLK R+ +L+N IGNL S Sbjct: 292 SKSLGNVIDPYKMVQDYGLDEVRYFLLREVPFGQDGDITQEGLKNRLVGELSNQIGNLFS 351 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R SM+++ +G A E D S + C V+++ M+ + AL V+ L + Sbjct: 352 RVSSMVIRYTEG-----KASGEKDRSYEAFCGEVIKDHHHRMEKVDFYNALEAVLKLSNF 406 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 +++Y D + PW L K++ + VLY + + LA LL F+P +F+ Sbjct: 407 LNKYVDEKAPWSLAKSDEKKLKDVLYTLTDGLFVLAYLLYPFMPSKMELVFE 458 >gi|227514298|ref|ZP_03944347.1| methionine--tRNA ligase [Lactobacillus fermentum ATCC 14931] gi|227087346|gb|EEI22658.1| methionine--tRNA ligase [Lactobacillus fermentum ATCC 14931] Length = 666 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 209/520 (40%), Positives = 318/520 (61%), Gaps = 11/520 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG++Y + D ARF RL G DV F TGTDEHG KI + Sbjct: 1 MAEQPTYYITTPIYYPSGRLHIGNSYTTVACDAEARFKRLSGFDVFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G + +VD+ + +++ L+I+ D FIRTT+ H + +++++ D+GDIY Sbjct: 61 KAEKLGKDPQTYVDEMAAGIKELWQKLEITNDKFIRTTDGYHEAAVQKIFQQLLDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 KG Y GWYS+ DE Y+ + EV+K +GQ + VQ ++EE YFF++S Y D Sbjct: 121 KGEYVGWYSVDDEEYFTESQLKEVFKDENGQVTGGIAPSGHEVQLVKEESYFFKMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 L+ YY++HP+FI P R NE++ +F++ GL+DL+++R +F+WG+K+P+DP++++YVWID Sbjct: 181 WLMDYYKAHPDFIQPESRMNEMVKNFLEPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L + LPLPK V H Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHMVGKEIIRFHTIYWPIMLHALGLPLPKHVIGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++ K K+SKS GNV+ P +I+ G+DA RY+L+R + G DG + + ++VN D Sbjct: 301 GWLTMKDGKMSKSKGNVVYPETLIDRYGLDATRYYLLRAMPFGNDGVFSPEDFVEKVNYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+M+ K G ++ PGA T+ D + V L E RE M Sbjct: 361 LANDLGNLLNRTVAMVNKYQAGKLVGQPGATTDFDADLEQVAQDALVEYRELMDQTRFAD 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + L++ ++Y D +PW L K S VL + +R +A +LQ +P Sbjct: 421 ALSAIWKLIARANKYIDETEPWVLAKDEQQAPVLSDVLTHLAKSLRMVAAMLQPIMPTAP 480 Query: 471 NKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPR 509 +I L +A E L P ++ + PIFPR Sbjct: 481 KEILGQLGLAKEAISISDLSFNDFPAEVVVVEKGTPIFPR 520 >gi|161506812|ref|YP_001576766.1| methionyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] gi|160347801|gb|ABX26475.1| Methionyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] Length = 658 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 209/524 (39%), Positives = 321/524 (61%), Gaps = 18/524 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + IG+AY I AD +AR+ R G D F TGTDEHG KI + Sbjct: 1 MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGYDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD+ + +++ + LDISYD FIRTT++ H + +++K+ KGDIY Sbjct: 61 KAEAQGIKPQEFVDKMAASYKKLWKSLDISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVYK +G + + V+ ++E YFF++S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YY+ HPEFILP R E+++ F+K GL+DLS++R T +WGI +P DP++++YVWID Sbjct: 181 RLVEYYKEHPEFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK + H Sbjct: 241 ALSNYITALGYGSDHDELFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P + G+D LRY+L+R + G DG + + +R+N D Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGIDPLRYYLMRALPFGADGIFTPEDFIERINYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+VSMI + DG + P P A + + + + V+ + RE M + + Sbjct: 361 LANDLGNLLNRTVSMINQYQDGQVAPVPVAQDKLGKDLQDTAASVIADYREQMDSLHFSQ 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL + LV+ ++Y D PW L K+ D S V+ E +R +AI++ + + A Sbjct: 421 ALDSIWKLVARANKYIDETTPWVLNKEGKKDELSHVMSNLAESLRLIAIMIYPVMTETAP 480 Query: 472 KIFDILFVA-----DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 K+F+ L + +N F K + + PIFPR Sbjct: 481 KMFEQLGLNWDDEDQKNLAFNDFGWNTK----VVEKPKPIFPRL 520 >gi|297587469|ref|ZP_06946113.1| methionine--tRNA ligase [Finegoldia magna ATCC 53516] gi|297574158|gb|EFH92878.1| methionine--tRNA ligase [Finegoldia magna ATCC 53516] Length = 665 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 203/475 (42%), Positives = 311/475 (65%), Gaps = 8/475 (1%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E++ YI+T I YP++ H+GH Y IIAD L +F ++ G DV TTGTDEHGQK+ + Sbjct: 3 EEKKSYYITTPIYYPSSNLHLGHTYTTIIADTLKKFKKIQGYDVFLTTGTDEHGQKLYEK 62 Query: 62 AQ--NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ N G ++D ++ +D+ LDI D F+R+T+K H + +++K+ DKGDI Sbjct: 63 AKEKNMGDNPLNYIDPIVQSAKDLWKKLDIDIDSFVRSTDKAHEKNVQEIFQKLYDKGDI 122 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 YK Y G Y + EA++ + ++ DG+ + + V + EEE YFFRLS Y+D++L Sbjct: 123 YKSTYKGHYCVDCEAFWTESQL---KDGKCPDCGRD-VHYHEEESYFFRLSKYKDRILQL 178 Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 Y+ +P+F+ P R+NE+++ F+ L+DLS+SR +FDWG+K+P D ++I+YVWIDAL+ Y Sbjct: 179 YKDNPDFLKPESRKNEMVNNFLSGELEDLSVSRTSFDWGVKVPFDDKHIIYVWIDALSCY 238 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 LT GY + + K KFWP D+H++GK+I+RFH I WPA L++ +LPLPK+VF+HG+IL Sbjct: 239 LTGIGYGQDEELFK-KFWPCDIHLVGKEIVRFHTIIWPALLMALDLPLPKRVFAHGWILF 297 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 +K+SKS GNV P +I+ GVDAL+Y+++R+ G DG + + R N+DL N + Sbjct: 298 NEDKMSKSKGNVYYPEPIIDLYGVDALKYYILRDFTFGNDGNFTTERFMNRFNSDLVNDL 357 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNLVSRSVSM+ K +DG+IP P + D+S++SV ++ E ++ AL ++ Sbjct: 358 GNLVSRSVSMVEKYFDGVIPQPNDNNDIDKSLISVVEGCQGKVEELLEELDFSNALEEIW 417 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +V ++Y D PW L K +P+R TVLY ++ IR + IL F+ + +NKI Sbjct: 418 KVVRRANKYIDETTPWILIKEDPERLKTVLYNLMDAIRVICILTSPFITETSNKI 472 >gi|295107808|emb|CBL21761.1| methionyl-tRNA synthetase [Ruminococcus obeum A2-162] Length = 652 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 209/492 (42%), Positives = 314/492 (63%), Gaps = 11/492 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R +G DV F TGTDEHGQKI A Sbjct: 2 DKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRQEGYDVFFQTGTDEHGQKIELKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + AG+T K FVD S + + D+++ SYD FIRTT+ H + ++KK+ KGDIYKG Sbjct: 62 EEAGITPKEFVDNVSGEIKRIWDLMNTSYDKFIRTTDADHEKQVQKIFKKMYAKGDIYKG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y E+++ + ++ DG+ + P +EE YFF++S Y D+L+ Y + Sbjct: 122 HYEGMYCTPCESFFTESQL---VDGKCPDCGR-PCVPAKEEAYFFKMSKYADRLIDYINT 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HP+FI P R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+T Sbjct: 178 HPDFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 237 Query: 242 TGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GY + + S+ K WPADLH+IGKDI+RFH IYWP FL+S +LPLPK+VF H ++L Sbjct: 238 IGYDCDGESSEQFNKLWPADLHLIGKDIIRFHTIYWPIFLMSLDLPLPKQVFGHPWLLQG 297 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GNVI E+++ GVDA+RYF++ E+ DG + + +R+N++LAN +G Sbjct: 298 DGKMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSELANTLG 357 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLV+R++SM K + G++ G DE + + V ++ E M + A+ +V + Sbjct: 358 NLVNRTISMSNKYFGGVVENKGVVEPVDEDLKAFALAVPGKVAEKMDKLRVADAMTEVFT 417 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L +++Y D PW L K +R +TVLY VE I A LL++F+P+ +I L Sbjct: 418 LFKRLNKYIDETMPWALAKDEAKKERLATVLYNLVEGITMGATLLESFMPETTERILAQL 477 Query: 478 FVADENRCFQSL 489 E R + L Sbjct: 478 --NTEKRTLEDL 487 >gi|33303709|gb|AAP22262.1| methionyl-tRNA synthetase [Bacillus cereus] Length = 416 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 192/416 (46%), Positives = 288/416 (69%), Gaps = 10/416 (2%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K A+ +T + +VD Sbjct: 1 HIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNITPQAYVDNIVAGI 60 Query: 81 RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND-- 138 +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Y GWYS++DE +Y + Sbjct: 61 KELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQ 120 Query: 139 --DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193 D + +G G+ ++ H+ V+ + EE YFFR+ Y D+LL +YE +P FI P R+ Sbjct: 121 LVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVDRLLKFYEDNPHFIQPESRK 179 Query: 194 NEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252 NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+DAL+NY+T GY + Sbjct: 180 NEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTANEEKY 239 Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312 KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+HG+IL K K+SKS GNV+D Sbjct: 240 KKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVD 299 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 P+ +I+ G+DALRY+L+RE+ G DG + +G +R+N DLAN +GNL++R+V+MI K Sbjct: 300 PVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKY 359 Query: 373 YDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 + G IP A TE DE++++ L+++ E M+N AL + LVS ++Y Sbjct: 360 FSGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSVALGSIWQLVSRTNKY 415 >gi|260663709|ref|ZP_05864597.1| methionyl-tRNA synthase [Lactobacillus fermentum 28-3-CHN] gi|260551760|gb|EEX24876.1| methionyl-tRNA synthase [Lactobacillus fermentum 28-3-CHN] Length = 666 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 209/520 (40%), Positives = 318/520 (61%), Gaps = 11/520 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG++Y + D ARF RL G DV F TGTDEHG KI + Sbjct: 1 MAEQPTYYITTPIYYPSGRLHIGNSYTTVACDAEARFKRLSGFDVFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G + +VD+ + +++ L+I+ D FIRTT+ H + +++++ D+GDIY Sbjct: 61 KAEKLGKDPQTYVDEMAAGIKELWQKLEITNDKFIRTTDGYHEAAVQKIFQQLLDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 KG Y GWYS+ DE Y+ + EV+K +GQ + VQ ++EE YFF++S Y D Sbjct: 121 KGEYVGWYSVDDEEYFTESQLKEVFKDENGQVTGGIAPSGHEVQLVKEESYFFKMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 L+ YY++HP+FI P R NE++ +F++ GL+DL+++R +F+WG+K+P+DP++++YVWID Sbjct: 181 WLMDYYKAHPDFIQPESRMNEMVKNFLEPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L + LPLPK V H Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILHALGLPLPKHVIGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++ K K+SKS GNV+ P +I+ G+DA RY+L+R + G DG + + ++VN D Sbjct: 301 GWLTMKDGKMSKSKGNVVYPETLIDRYGLDATRYYLLRAMPFGNDGVFSPEDFVEKVNYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+M+ K G ++ PGA T+ D + V L E RE M Sbjct: 361 LANDLGNLLNRTVAMVNKYQAGKLVGQPGATTDFDADLEQVAQDALVEYRELMDQTRFAD 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + L++ ++Y D +PW L K S VL + +R +A +LQ +P Sbjct: 421 ALSAIWKLIARANKYIDETEPWVLAKDEQQAPVLSDVLTHLAKSLRMVAAMLQPIMPTAP 480 Query: 471 NKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPR 509 +I L +A E L P ++ + PIFPR Sbjct: 481 KEILGQLGLAKEAISLSDLSFNDFPAEVVVVEKGTPIFPR 520 >gi|253579415|ref|ZP_04856685.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849513|gb|EES77473.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 652 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 209/486 (43%), Positives = 310/486 (63%), Gaps = 13/486 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI A Sbjct: 2 EKQKYYITTAIAYTSGKPHIGNTYEVVLADAIARYKRQQGYDVFFQTGTDEHGQKIELKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + AG+T K FVD S + + D+++ SYD FIRTT++ H + ++KK+ KGDIYKG Sbjct: 62 EEAGITPKEFVDNVSGEIKRIWDLMNTSYDKFIRTTDEDHEKQVKKIFKKMYAKGDIYKG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y E+++ + ++ DG+ + P +EE YFF++S Y DKL+ Y + Sbjct: 122 HYEGMYCTPCESFFTESQL---VDGKCPDCGR-PCVPAKEEAYFFKMSKYADKLIDYINT 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HP+FI P R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+T Sbjct: 178 HPDFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 237 Query: 242 TGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 GY + DG K WPADLH+IGKDI+RFH IYWP FL+S +LPLPK+VF H ++L Sbjct: 238 IGY--DCDGESTEQFNKLWPADLHLIGKDIIRFHTIYWPIFLMSLDLPLPKQVFGHPWLL 295 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 K+SKS GNVI E+++ GVDA+RYF++ E+ DG + + +R+N++LAN Sbjct: 296 QGDGKMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSELANT 355 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 +GNLV+R++SM K + G++ G D+ + + V ++ E M + A+ +V Sbjct: 356 LGNLVNRTISMSNKYFGGVVENKGVTEPVDDDLKNFILSVPAKVNEKMDKLRVADAMTEV 415 Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 ++ ++Y D PW L K DR +TVLY VE I A+LL++F+P+ +I Sbjct: 416 FTIFKRCNKYIDETMPWALAKDEEKKDRLATVLYNLVEGICIGAVLLKSFMPETTERILA 475 Query: 476 ILFVAD 481 L D Sbjct: 476 QLNAQD 481 >gi|295692078|ref|YP_003600688.1| methionyl-tRNA synthetase [Lactobacillus crispatus ST1] gi|295030184|emb|CBL49663.1| Methionyl-tRNA synthetase [Lactobacillus crispatus ST1] Length = 658 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 210/524 (40%), Positives = 323/524 (61%), Gaps = 18/524 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + IG+AY I AD +AR+ R G D F TGTDEHG KI + Sbjct: 1 MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGYDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD+ + +++ + L+ISYD FIRTT+++H + +++K+ KGDIY Sbjct: 61 KAEAQGIKPQEFVDKMAASYKKLWKSLNISYDKFIRTTDEQHVQAVQKIFEKLLKKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVYK DG + + V+ ++E YFF++S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDDGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YY+ HP+FILP R E+++ F+K GL+DLS++R T +WGI +P DP++++YVWID Sbjct: 181 RLVEYYKEHPDFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK + H Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P + GVD LRY+L+R + G DG + + +R+N D Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGVDPLRYYLMRALPFGDDGIFTPEDFVERINYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+VSMI + G + P A E + + + V+ + RENM + + Sbjct: 361 LANDLGNLLNRTVSMINQYQAGHVDAVPVAQAEFGKDLQDTAASVINDYRENMNSLHFSK 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL + LVS ++Y D PW L K+ + S V+ E +R +AI+++ + + A Sbjct: 421 ALDNIWKLVSRANKYIDETTPWALNKEGKKEELSKVMSNLAESLRLIAIMIEPVMTETAP 480 Query: 472 KIFDILFVADENR-----CFQSLDQRLKPGFMLHKTFDPIFPRF 510 +F L + +N F D +K ++ K PIFPR Sbjct: 481 IMFKQLGLNWDNEDAKHLAFGDFDWDVK---VIEKP-QPIFPRL 520 >gi|299782799|gb|ADJ40797.1| Methionyl-tRNA synthase [Lactobacillus fermentum CECT 5716] Length = 666 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 209/520 (40%), Positives = 318/520 (61%), Gaps = 11/520 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG++Y + D ARF RL G DV F TGTDEHG KI + Sbjct: 1 MAEQPTYYITTPIYYPSGRLHIGNSYTTVACDAEARFKRLSGFDVFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G + +VD+ + +++ L+I+ D FIRTT+ H + +++++ D+GDIY Sbjct: 61 KAEKLGKDPQTYVDEMAAGIKELWQKLEITNDKFIRTTDGYHEAAVQKIFQQLLDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 KG Y GWYS+ DE Y+ + EV+K +GQ + VQ ++EE YFF++S Y D Sbjct: 121 KGEYVGWYSVDDEEYFTESQLKEVFKDENGQVTGGIAPSGHEVQLVKEESYFFKMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 L+ YY++HP+FI P R NE++ +F++ GL+DL+++R +F+WG+K+P+DP++++YVWID Sbjct: 181 WLMDYYKAHPDFIQPESRMNEMVKNFLEPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L + LPLPK V H Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILHALGLPLPKHVIGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++ K K+SKS GNV+ P +I+ G+DA RY+L+R + G DG + + ++VN D Sbjct: 301 GWLTMKDGKMSKSKGNVVYPETLIDRYGLDATRYYLLRAMPFGNDGVFSPEDFVEKVNYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+M+ K G ++ PGA T+ D + V L E RE M Sbjct: 361 LANDLGNLLNRTVAMVNKYQAGKLVGQPGATTDFDADLEQVAQDALVEYRELMDQTRFAD 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL+ + L++ ++Y D +PW L K S VL + +R +A +LQ +P Sbjct: 421 ALSAIWKLIARANKYIDETEPWVLAKDEQQAPVLSDVLTHLAKSLRMVAAMLQPIMPTAP 480 Query: 471 NKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPR 509 +I L +A E L P ++ + PIFPR Sbjct: 481 KEILGQLGLAKEAISLSDLSFNDFPAEVVVVEKGTPIFPR 520 >gi|227431221|ref|ZP_03913275.1| methionyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352983|gb|EEJ43155.1| methionyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 702 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 217/523 (41%), Positives = 322/523 (61%), Gaps = 15/523 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +K+ + YI+T I YP+ + +G+ Y ++AD AR+HRL G DV F TGTDEHG KI + Sbjct: 33 VKKDKTFYITTPIYYPSGKLQLGNTYTTVLADAAARYHRLLGEDVYFLTGTDEHGLKIQQ 92 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG++ F+D ++ +D+ ++DISYDDFIRTTE RH ++ ++ + GDIY Sbjct: 93 KAEAAGISEIDFLDGMAKQIKDLWKLMDISYDDFIRTTEDRHEKAVAKIFTQLLENGDIY 152 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 KG Y GWYS+ DE Y+ + EVY+ G+ + + V+ ++EE YFF++S Y D Sbjct: 153 KGEYEGWYSVSDEEYFTESQLAEVYRDDAGKVIGGKAPSGHEVELVKEEAYFFKMSKYAD 212 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 LL YY++HPEFI P R NE+I+ F+ GL+DL+++R +FDWGI +P D ++++YVWID Sbjct: 213 WLLDYYKTHPEFIQPEARMNEMINNFIAPGLEDLAVTRTSFDWGISVPGDEKHVIYVWID 272 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T GY + KFWPA++ ++GK+I+RFH IYWP L + L LPK V H Sbjct: 273 ALANYITALGYNSDDTTLFDKFWPANVQLVGKEIVRFHTIYWPIMLHALGLELPKSVVGH 332 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 G+++ K K+SKS GNVI P EV+EE G+DA+RY+L+R + G DG + + RVN Sbjct: 333 GWLVMKDGKMSKSKGNVIYP-EVLEERYGLDAVRYYLLRSMPFGNDGVFTPEDFVARVNY 391 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN +GNL++R+V+MI K DG+IP T DE ++ + E +N + Sbjct: 392 DLANDLGNLLNRTVAMINKYVDGVIPELLTGKTSFDEDLVRTVEDAIVEYNKNFKELCTA 451 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469 AL V ++ ++Y D +PW L K ++ S+V+ +R A+LLQ + + Sbjct: 452 DALESVWKIIRRANKYIDETQPWVLAKDENEKEVLSSVMAHLAGALRVTAVLLQPVLTQA 511 Query: 470 ANKIFDILFV--ADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509 KIFD L + +D+ L +L G + K +PIFPR Sbjct: 512 PKKIFDQLGLDYSDKGVAIAGLTFSKLPTGGHVVKKGEPIFPR 554 >gi|225026669|ref|ZP_03715861.1| hypothetical protein EUBHAL_00921 [Eubacterium hallii DSM 3353] gi|224956039|gb|EEG37248.1| hypothetical protein EUBHAL_00921 [Eubacterium hallii DSM 3353] Length = 654 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 207/474 (43%), Positives = 306/474 (64%), Gaps = 13/474 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI A AG+ Sbjct: 7 YITTAIAYTSGKPHIGNTYEIVLADAIARFKRKEGYDVRFQTGTDEHGQKIELKAAEAGI 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + K FVD + + + D+++ SYD FIRTT++ H + ++KK+ DKGDIYKG Y G Sbjct: 67 SPKEFVDNTAGEIKRIWDLMNTSYDKFIRTTDEDHEKQVQKIFKKLYDKGDIYKGHYEGM 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + P Q +EE YFFR+S Y D+L+ Y +P+FI Sbjct: 127 YCTPCESFFTESQL---VDGKCPDCGR-PCQPAKEEAYFFRMSKYADRLIQYINDNPDFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+T GY Sbjct: 183 QPESRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDPKHVVYVWLDALTNYITGLGY-- 240 Query: 247 NPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 + DG K+WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L K Sbjct: 241 DCDGESGELFKKYWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQGDGK 300 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNVI ++++ GVDA+RYF++ E+ DG D L +R+N+DLAN +GNLV Sbjct: 301 MSKSKGNVIYADDLVDLFGVDAVRYFVLHEMPFENDGVITWDLLVERMNSDLANTLGNLV 360 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 +R++SM K + G++ G D++++ V ++ + M + A+ ++ +L Sbjct: 361 NRTISMSNKYFGGVVANSGVTDGFDKNLMDVALDTKHKVIKCMSKLRVADAMTEIFNLFK 420 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 ++Y D PW L K DR +TVLY VE I A LL F+P+ A +IF Sbjct: 421 RCNKYIDETMPWALAKDPAKQDRLATVLYNLVESITIGASLLSPFMPETAERIF 474 >gi|320104232|ref|YP_004179823.1| methionyl-tRNA synthetase [Isosphaera pallida ATCC 43644] gi|319751514|gb|ADV63274.1| methionyl-tRNA synthetase [Isosphaera pallida ATCC 43644] Length = 530 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 212/478 (44%), Positives = 302/478 (63%), Gaps = 5/478 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M+E YI+TAI YPN++PHIG A+E I AD+ AR+ RL G V F G DE+ K+++ Sbjct: 1 MREESWFYITTAIDYPNSRPHIGTAFEKIGADIQARYQRLRGKRVRFQMGNDENTIKVSQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A G+ K +VD +R F+++ LD+SYDDFI+T+E RH CR +++ D GDIY Sbjct: 61 RAAQLGLEPKPYVDDMARQFQEVWRALDLSYDDFIQTSEPRHAAGCRRFIQQVFDNGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y G Y EA+ D EV +G +G+ + ++ +EEE YFF+LS Y D LL +Y Sbjct: 121 KKSYVGLYCDGCEAFKTDKEVAEG-NGRCPLHPNQELRRVEEENYFFKLSKYADALLDFY 179 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 SHP+FI P RRNE+++FV++GL+DLS+SRK F WGIK+P D + +YVW DAL NYLT Sbjct: 180 RSHPDFIQPESRRNEIVNFVEAGLQDLSISRKGFTWGIKVPFDEEQTIYVWFDALLNYLT 239 Query: 241 TTGY--LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 GY D+PD +A +WPAD+HVIGKDI RFH + WPA L+SA + P++VF HGF+ Sbjct: 240 AIGYGDADDPDRWRA-WWPADVHVIGKDITRFHCVIWPAMLMSAGIEPPRRVFGHGFVYV 298 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 KG K SKS GNV+DP E+ + G DA+RY+ RE G DG Y ++ NADLAN + Sbjct: 299 KGAKASKSQGNVVDPHELTQRFGSDAVRYYFARECPFGGDGNYAEERFIDLYNADLANNL 358 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV- 417 GNL SRS+SM +K +DG++ G + R + EI E +++ + AL ++ Sbjct: 359 GNLYSRSLSMCVKYFDGVLEEIGDVDPTAWRAGVDWPRFVAEIGELIESFQTNVALQRIW 418 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + + V++Y A +P+ L KT+P V+ E +R LA+L+ +P+ A ++ Sbjct: 419 LEGLDLVNQYIQATQPFRLVKTDPQATKVVMVNLAEALRALAVLIAPVLPRTARTFYE 476 >gi|313884451|ref|ZP_07818212.1| methionine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8] gi|312620235|gb|EFR31663.1| methionine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8] Length = 675 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 211/523 (40%), Positives = 326/523 (62%), Gaps = 14/523 (2%) Query: 1 MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M EK YI+T I YP+ + HIG++Y +++D +AR+ RL G DV F TGTDEHGQKI Sbjct: 1 MTHTEKTFYITTPIYYPSGRLHIGNSYSTLVSDAMARYKRLMGYDVYFLTGTDEHGQKIE 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 + A + G+ + +VD + + + + + L IS D F+RT++ H + +++++ +GDI Sbjct: 61 QKAADLGIEPQAYVDGMAADIKALWEKLKISNDGFVRTSDDYHQKAVQDIFERLLAQGDI 120 Query: 120 YKGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQ 173 Y G Y GWYS+ DE Y+ + EV+K +G+ N V+ ++EE YFF+LS Y Sbjct: 121 YLGEYEGWYSVSDEEYFTETQLSEVFKDENGKVIGGIAPTGNKVELVKEESYFFKLSNYT 180 Query: 174 DKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 D+LL YY+ HP+FI P R+ E+++ F+K GL+DL++SR +F WGI + +P++++YVWI Sbjct: 181 DRLLEYYDQHPDFITPAFRKTEMVNNFIKPGLEDLAVSRTSFTWGIPVKSNPKHVVYVWI 240 Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 DAL+NY+T GY ++ KFWPAD+ VIGKDI RFH IYWP L++ +LPLPKK+++ Sbjct: 241 DALSNYITKLGYGNDHQDIMDKFWPADVQVIGKDISRFHMIYWPILLMALDLPLPKKIYA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+I+ K K+SKS GNVI P +I+ G+D R++L+RE++ G D + + R N Sbjct: 301 HGWIVMKDGKMSKSRGNVIYPETLIDRYGLDVTRFYLLREMSQGNDTVFTPEDFVNRANF 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 +LAN +GNL++R+V+M+ K +DG +P T+ D+ + + + E+M++ + Sbjct: 361 ELANDLGNLLNRTVAMMNKYFDGQVPQAKVSTDFDQDFEAYLADEMTAYFESMESMTFDQ 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKL 469 AL V+ +VS ++Y D PW L K +P D+ V+Y E +R +A LL+ F+ + Sbjct: 421 ALDHVMHMVSRTNKYIDETTPWVLAK-DPDLKDQLGAVMYHLAEALRLVANLLRPFMLES 479 Query: 470 ANKIFDILFVADE-NRCFQSLDQRLKP-GFMLHKTFDPIFPRF 510 KIF L + E NR L P + K +PIFPR Sbjct: 480 PEKIFQQLGIESETNRQLDDLAWGQFPESAQVVKKGEPIFPRL 522 >gi|210623269|ref|ZP_03293686.1| hypothetical protein CLOHIR_01636 [Clostridium hiranonis DSM 13275] gi|210153670|gb|EEA84676.1| hypothetical protein CLOHIR_01636 [Clostridium hiranonis DSM 13275] Length = 644 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 214/511 (41%), Positives = 311/511 (60%), Gaps = 12/511 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I YP+ + HIGH Y + AD +ARF R G DV F TGTDEHG+KI K A+ AG Sbjct: 6 FYVTTPIYYPSGKLHIGHTYTTVAADAIARFKRFCGYDVKFLTGTDEHGEKIQKKAKEAG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T ++D + + + LDISYDDFIRTTE RH + + ++ K+ ++GDIYKG Y G Sbjct: 66 MTEIEYLDGMIADIKALWKKLDISYDDFIRTTEPRHTEIIQKIFTKLYEQGDIYKGTYEG 125 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y E+++ + ++ DG +EE YFF+LS Y+D+L + S +F Sbjct: 126 RYCTPCESFWTESQL---IDGTKCPDCGRETYVAKEEAYFFKLSKYEDRLKELF-SRDDF 181 Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 LP+ RRNE++S F+ GL+DL ++R TFDWGI +P D ++++YVW+DAL NY+T GY+ Sbjct: 182 CLPVSRRNEMVSNFLDKGLEDLCVTRTTFDWGIPVPFDEKHVIYVWVDALCNYITALGYM 241 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + D K+WPA +H+ K+I RFH I WPA L++ L +PK+V+ HG+IL +K+SK Sbjct: 242 TDNDEEFKKYWPASVHLTAKEITRFHTIIWPAILMALGLEVPKQVYGHGWILFDDDKMSK 301 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S GNV+ P +IE GVDAL+YFL+RE + G+DG Y R+N+DLAN +GNLVSR+ Sbjct: 302 SKGNVVYPGPMIERYGVDALKYFLLREFSFGQDGSYTNRNFINRINSDLANDLGNLVSRT 361 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 V+M+ K +G+IP TE DES+ + ++ M H AL V LV + Sbjct: 362 VAMVEKYNEGLIPEATVATEFDESLKEQAAASAKDFEAQMDALQFHEALESVWKLVRRTN 421 Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +Y D PW L K + +TVLY E IR +A L+ + AN+I+D L +A + Sbjct: 422 KYIDETMPWALAKDEAKKEELNTVLYNLCESIRIIATLINPIMNTTANRIYDQLGIAGQE 481 Query: 484 RC--FQSLDQ--RLKPGFMLHKTFDPIFPRF 510 ++S+ +K G +HK + +FPR Sbjct: 482 DITNWESVKSFGLIKVGTKVHKG-EALFPRL 511 >gi|160916068|ref|ZP_02078275.1| hypothetical protein EUBDOL_02095 [Eubacterium dolichum DSM 3991] gi|158431792|gb|EDP10081.1| hypothetical protein EUBDOL_02095 [Eubacterium dolichum DSM 3991] Length = 651 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 210/512 (41%), Positives = 317/512 (61%), Gaps = 9/512 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K YI+TAIAY + +PHIG+ YE+++ D +AR+ R G DV F TGTDEHGQKI + A+ Sbjct: 6 KGKYYITTAIAYTSGRPHIGNTYEIVLTDAIARYKRQQGYDVFFQTGTDEHGQKIEEKAK 65 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T K FVD + R D+++ SYD F+RTT+ H + ++KK+ ++GDIYK Sbjct: 66 EAGITPKEFVDNIAGIVRKNFDMMNTSYDYFVRTTDDYHEKQVQKIFKKLYEQGDIYKST 125 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ DG+ + PV+ EE YFF L Y +L+ + E+H Sbjct: 126 YEGMYCTPCESFWTESQL---VDGKCPDCGR-PVKKATEEAYFFNLQKYSPRLIEHIETH 181 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEFI P R+NE+I+ F+K GL+DL +SR +F WGI + DP +++YVWIDAL+NY+T+ Sbjct: 182 PEFIQPESRKNEMINNFLKPGLQDLCVSRTSFKWGIPVDFDPDHVVYVWIDALSNYITSL 241 Query: 243 GY-LDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 G+ +D G K+WPAD+H+IGKDILRFH IYWP L++ PLPK+VF H ++L Sbjct: 242 GFDVDGNHGENYKKYWPADVHIIGKDILRFHTIYWPIMLMALGEPLPKQVFGHPWLLVGD 301 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKS GN I E++ GVDA+RYF++ E+ +DG D + +RVN+DLAN +GN Sbjct: 302 GKMSKSKGNAIYADELVHYFGVDAVRYFVLHEMPFAQDGTITWDLMVERVNSDLANVLGN 361 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 LV+R++SM K + G+I P D ++ + + + E M + A+ ++ +L Sbjct: 362 LVNRTISMQNKYFHGVISNPMEGDPLDAELIELAVATVHNVDEKMDQLRVGEAIDEIFTL 421 Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 + ++Y D PW L K T DR +TVLY +E IR A+LL++F+P+ + KI D L Sbjct: 422 LKRCNKYIDETTPWTLGKDETKKDRLATVLYNLLESIRYAAVLLESFMPETSEKILDQLS 481 Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + ++ +L+ G + +F R Sbjct: 482 TSRRDKASLESFGQLECGHTVEAKPSILFQRI 513 >gi|116617428|ref|YP_817799.1| methionyl-tRNA synthetase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096275|gb|ABJ61426.1| methionyl-tRNA synthetase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 702 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 217/523 (41%), Positives = 322/523 (61%), Gaps = 15/523 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +K+ + YI+T I YP+ + +G+ Y ++AD AR+HRL G DV F TGTDEHG KI + Sbjct: 33 VKKDKTFYITTPIYYPSGKLQLGNTYTTVLADAAARYHRLLGEDVYFLTGTDEHGLKIQQ 92 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG++ F+D ++ +D+ ++DISYDDFIRTTE RH ++ ++ + GDIY Sbjct: 93 KAEAAGISEIDFLDGMAKQIKDLWKLMDISYDDFIRTTEDRHEKAVAKIFTQLLENGDIY 152 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 KG Y GWYS+ DE Y+ + EVY+ G+ + + V+ ++EE YFF++S Y D Sbjct: 153 KGEYEGWYSVSDEEYFTESQLAEVYRDDAGKVIGGKAPSGHEVELVKEEAYFFKMSKYAD 212 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 LL YY++HPEFI P R NE+I+ F+ GL+DL+++R +FDWGI +P D ++++YVWID Sbjct: 213 WLLDYYKTHPEFIQPEARMNEMINNFIAPGLEDLAVTRTSFDWGISVPGDEKHVIYVWID 272 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T GY + KFWPA++ ++GK+I+RFH IYWP L + L LPK V H Sbjct: 273 ALANYITALGYNSDDTTLFDKFWPANVQLVGKEIVRFHTIYWPIMLHALGLELPKSVVGH 332 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 G+++ K K+SKS GNVI P EV+EE G+DA+RY+L+R + G DG + + RVN Sbjct: 333 GWLVMKDGKMSKSKGNVIYP-EVLEERYGLDAVRYYLLRSMPFGNDGVFTPEDFVARVNY 391 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN +GNL++R+V+MI K DG+IP T DE ++ + E +N + Sbjct: 392 DLANDLGNLLNRTVAMINKYVDGVIPELLTGKTSFDEDLVRTVEDAIVEYNKNFKELRTA 451 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469 AL V ++ ++Y D +PW L K ++ S+V+ +R A+LLQ + + Sbjct: 452 DALESVWKIIRRANKYIDETQPWVLAKDENEKEVLSSVMAHLAGALRVTAVLLQPVLTQA 511 Query: 470 ANKIFDILFV--ADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509 KIFD L + +D+ L +L G + K +PIFPR Sbjct: 512 PKKIFDQLGLDYSDKGVAIAGLTFSKLPTGGHVVKKGEPIFPR 554 >gi|227544734|ref|ZP_03974783.1| methionine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300909020|ref|ZP_07126483.1| methionine--tRNA ligase [Lactobacillus reuteri SD2112] gi|227185274|gb|EEI65345.1| methionine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300894427|gb|EFK87785.1| methionine--tRNA ligase [Lactobacillus reuteri SD2112] Length = 675 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 211/520 (40%), Positives = 319/520 (61%), Gaps = 11/520 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +++ YI+T I YP+ + HIG++Y I D ARF RL G DV + TGTDEHG KI + Sbjct: 3 EQKPTYYITTPIYYPSGKLHIGNSYTTIACDAEARFKRLRGYDVFYLTGTDEHGLKIEQK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G+ + +VDQ + +++ L+I+ D FIRTT+ H + +++++ D+GDIYK Sbjct: 63 AEKLGMKPQEYVDQMAAQIKELWKKLEITNDKFIRTTDDYHEKAVQKIFQQLLDQGDIYK 122 Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y+GWYS+ DE Y+ + EVY+ DG + + VQ +EEE YFF++S Y D Sbjct: 123 GKYTGWYSVDDEEYFTESQLAEVYRDEDGNVIGGKAPSGHEVQLVEEESYFFKMSKYADW 182 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L++YY+ HP+FI P R NE+I+ F+K GL+DL+++R +F WG+K+P+DP++++YVWIDA Sbjct: 183 LMNYYKEHPDFIEPQSRMNEMINNFLKPGLEDLAVTRTSFAWGVKVPNDPKHVVYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L + LPLPK V HG Sbjct: 243 LSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHVIGHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 ++ + K+SKS GNVI P +++ G+DA RY+L+R + G DG + + +VN DL Sbjct: 303 WLTMRDGKMSKSKGNVIYPETLVDRYGLDATRYYLLRAMPFGNDGVFSPEDFVDKVNYDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +G ++ T A T+ D + S V+ E +E M A Sbjct: 363 ANDLGNLLNRTVAMINKYQNGKLLGTNDATTDFDADLEQTASDVIAEYKELMDKTRFAEA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 LA V LVS ++Y D +PW L K + D S V+ + +R +A L+Q +P Sbjct: 423 LAAVWKLVSRANKYIDETEPWVLAKDDSKKDVLSDVMTHLAKSLRIIAALIQPIMPHAPK 482 Query: 472 KIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 +I + L + + L P + PIFPR Sbjct: 483 QIVEQLGIEGTDLSLTDLQFNDFPAEAQVVAKGTPIFPRL 522 >gi|110803560|ref|YP_699780.1| methionyl-tRNA synthetase [Clostridium perfringens SM101] gi|110684061|gb|ABG87431.1| methionine--tRNA ligase [Clostridium perfringens SM101] Length = 645 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 199/477 (41%), Positives = 303/477 (63%), Gaps = 7/477 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ HIG+ Y + AD +ARF RL G +V+F TGTDEHGQKI + A Sbjct: 3 KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K VD+ +D+ +++ISYD FIRTT+ H + ++KK+ D+GDIYK Sbjct: 63 EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ G PV+ +EE YFF++S Y D+L+ Y E H Sbjct: 123 YEGLYCTPCESFWTETQLVNGNCPDC----GRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI P R+NE+++ F++ GL+DL +SR +F WGI + D ++++YVWIDAL+NY+T Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY KFWPAD+H+IGKDILRFH IYWP L++ L LPK+VF HG++L G K Sbjct: 239 GYGQENQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ ++ G DA+RY+L+REI G DG ++ + K+VN DLAN +GNL+ Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+++M+ K +DG+I P D+ ++++ ++ ++ I AL + +L+S Sbjct: 359 SRTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++Y D PW L K +R TVLY +E +R +++++ F+ + + KI D L Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKINDQL 475 >gi|253581458|ref|ZP_04858683.1| methionine-tRNA ligase [Fusobacterium varium ATCC 27725] gi|251836528|gb|EES65063.1| methionine-tRNA ligase [Fusobacterium varium ATCC 27725] Length = 641 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 213/513 (41%), Positives = 311/513 (60%), Gaps = 11/513 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + Y++T I Y N PH+G AY I ADV+AR+ + G DV F TGTDEHGQK+ + A+ Sbjct: 3 KNFYVTTPIYYVNGDPHVGSAYTTIAADVIARYKKTMGYDVFFLTGTDEHGQKVEETARQ 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G T + + D + F +M L+I Y DFIRTTE RH + + + KK+ D GDIYKG Y Sbjct: 63 KGYTPQEWTDIMAPKFVEMWKALNIEYTDFIRTTEPRHKEAVKKILKKVYDNGDIYKGEY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG Y + E + ++++ +G + ++ + EE YFF++S YQD LL++ +SHP Sbjct: 123 SGKYCVSCETFVPENQI---VNGNHCPDCGKELRVVREESYFFKMSKYQDALLAHIDSHP 179 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FILP R+NEV+SF+K GL+DLS+SR TF+WGI I P +I YVW DALTNYLT GY Sbjct: 180 DFILPRSRKNEVVSFIKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTAVGY 239 Query: 245 LDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 +NP+ KFW +H++GKDI+RFHAI WP LLSA + LP + +HG+ +GEK Sbjct: 240 ENNPELFD-KFWTNGEVMHLLGKDIVRFHAIIWPCMLLSAGVKLPDNIVAHGWWTSEGEK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DPI ++ GVDA RY L+RE+ G DG Y + R+N+DLAN +GNL+ Sbjct: 299 MSKSKGNVVDPIAESKKYGVDAFRYCLLREVQFGNDGDYSTKSVVTRINSDLANDLGNLL 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 +R++ M K ++G+I D+ I ++ + L E+ E M ++L + +S Sbjct: 359 NRTLGMYKKYFNGVIVDGTERDVFDDEIENLWNETLSEVTEQMNIVQFSKSLEAIWKFIS 418 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +++Y D PW L K DR + V+ V + ++A+++ ++P A KI++ L V Sbjct: 419 RLNKYIDETMPWSLAKDENKKDRLAVVMNHLVNGLYKIAVMVYPYMPAAAQKIWNQLGVE 478 Query: 481 DENRCFQSLD---QRLKPGFMLHKTFDPIFPRF 510 R + D L P + +PIFPR Sbjct: 479 KLVRDAKVADITGWNLLPAGHILGNAEPIFPRL 511 >gi|227894430|ref|ZP_04012235.1| methionine--tRNA ligase [Lactobacillus ultunensis DSM 16047] gi|227863800|gb|EEJ71221.1| methionine--tRNA ligase [Lactobacillus ultunensis DSM 16047] Length = 658 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 206/520 (39%), Positives = 321/520 (61%), Gaps = 10/520 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + IG+AY I AD +AR+ R G D F TGTDEHG KI + Sbjct: 1 MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRAQGYDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD+ + +++ + LDISYD FIRTT+++H + +++K+ +GDIY Sbjct: 61 KAEAQGIKPQQFVDKMAASYKKLWKSLDISYDKFIRTTDEQHVKAVQKIFEKLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVYK +G + + V+ ++E YFF++S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YY+ HP+FILP R E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 181 RLVKYYKEHPDFILPHSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L++ LPLPK + H Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKHIIGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P + GVD LRY+L+R + G DG + + +R+N D Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGVDPLRYYLMRALPFGADGIFTPEDFVERINYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+VSMI + DG + P + E + + V+ E R+ M + + Sbjct: 361 LANDLGNLLNRTVSMINQYQDGHVDAVPASQDEFGKDLQDTAVNVISEYRKYMDSLHFSQ 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL + LV+ ++Y D PW L K+ + S V+ E +R +AI+++ + + A Sbjct: 421 ALDSIWKLVARANKYIDETTPWVLNKEGKKEELSHVMSNLAESLRLIAIMIEPVMTETAP 480 Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 K+F+ L ++ ++ + L + + PIFPR Sbjct: 481 KMFEQLGLSWDDEAARKLAFSDFGWNVKVTEKPKPIFPRL 520 >gi|195952737|ref|YP_002121027.1| methionyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] gi|195932349|gb|ACG57049.1| methionyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] Length = 493 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 211/477 (44%), Positives = 302/477 (63%), Gaps = 17/477 (3%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K Y++T I Y N PHIGHAY I AD +AR+ R G DV F TGTDEHG K+ KAA+ Sbjct: 2 KFYVTTPIYYVNDVPHIGHAYTTIAADTIARYKRQKGFDVFFLTGTDEHGLKLQKAAEEK 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T K D+N NF+++ D L ISYD IRTT+ H + + K+ ++GDIYKG Y Sbjct: 62 GMTPKELCDKNFENFKNLWDFLKISYDHIIRTTDDYHKAYVQEVITKVYERGDIYKGYYE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G+Y + E + + E+ D Y H + ++EE YFF+LS YQDKLL YE+ Sbjct: 122 GYYCVGCEEFKPESEI---KDFDYSCPIHKKKCELIKEETYFFKLSKYQDKLLELYET-- 176 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 +FI P R+ EVI+FV+ GLKDLS++R + WGI++P D +++YVW DAL NY++ Sbjct: 177 DFIKPDYRKEEVIAFVRQGLKDLSITRPKERVSWGIELPFDKNHVIYVWFDALFNYISAL 236 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 + +K +FWPAD H++GKDILRFHA+YWPAFL+S ++ LPK V++HG+ +G+K Sbjct: 237 KF-----KNKLEFWPADFHIVGKDILRFHAVYWPAFLMSLDMELPKHVYAHGWWTVEGQK 291 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKSLGNVI+P +V+ E G+D RYFL+RE+A G+DG + K+ +K+R+N +LANGIGNL+ Sbjct: 292 MSKSLGNVINPYDVVNEYGLDETRYFLLREVAFGQDGDFSKEAVKRRINGELANGIGNLI 351 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+ +M +K G+I + DE + VL+ + M H+AL +V+ LV Sbjct: 352 SRTFAMCIK--YGIIKKDD--IKEDEDYKKIAIEVLEAFDKYMNELQFHKALEEVMKLVD 407 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +++Y D + PW L K N VL ++ I +L F+P ++FD L V Sbjct: 408 YLNKYVDEKAPWTLAKNNDPSLKDVLLTLIDGILLSCWMLNPFMPNKMKEVFDALGV 464 >gi|327398216|ref|YP_004339085.1| methionyl-tRNA synthetase [Hippea maritima DSM 10411] gi|327180845|gb|AEA33026.1| Methionyl-tRNA synthetase [Hippea maritima DSM 10411] Length = 621 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 208/474 (43%), Positives = 302/474 (63%), Gaps = 9/474 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I Y N PHIGH+Y + AD LAR+ RL G DV F TGTDEHGQKI KAA++ Sbjct: 2 KKYYITTPIYYVNDVPHIGHSYTTLAADTLARYKRLLGEDVFFLTGTDEHGQKIQKAAKS 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 A T K D+ NF+ + LDI+ + F+RTT+ H + ++ I KGDIYKG Y Sbjct: 62 ANTTPKQLADRVVENFKKLWKKLDITNNFFVRTTDDYHQKCVQEAFEYIYKKGDIYKGEY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY + E+YY++ E+ + + + ++EE YFF+LSAYQD+LL +YE++P Sbjct: 122 EGWYCIPCESYYSEIEI---GENKTCPVCGRKLDLVKEESYFFKLSAYQDRLLEFYENNP 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +F+LP R NE+ SFVK GLKDLS++R +FDWGI +P D ++++YVW DAL NY++ G Sbjct: 179 DFVLPQTRYNEIKSFVKMGLKDLSITRTSFDWGIPVPFDDKHVIYVWFDALLNYVSAIGC 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 G WPAD+H +GKDILRFHA+YWPAFL++ +LPLPK V +HG+ G+K+S Sbjct: 239 RK---GDFDDIWPADVHFVGKDILRFHAVYWPAFLMALDLPLPKHVVAHGWWTVDGKKMS 295 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSLGNV+DP E+IE+ DA RYFL+R + G DG + + L +R+N+DL N GNL++R Sbjct: 296 KSLGNVVDPNEMIEKYPRDAYRYFLLRNVPFGLDGDFSEKELIERINSDLVNDFGNLLNR 355 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 S++M+ K G I P A + SIL+ +++ ++++ AL + + Sbjct: 356 SLTMMEKYSKGNIRRPSAINDDSLSILA--KETFKKVEDSLKVFRFDEALIAIFDFIKSA 413 Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++Y ++PW LKK D VLY ++ ++ ++ F+P ANK+ D+L Sbjct: 414 NKYIAQKEPWSLKKQGKQDELDEVLYNLYASLKFISGIISPFLPDAANKMQDML 467 >gi|169335812|ref|ZP_02863005.1| hypothetical protein ANASTE_02238 [Anaerofustis stercorihominis DSM 17244] gi|169258550|gb|EDS72516.1| hypothetical protein ANASTE_02238 [Anaerofustis stercorihominis DSM 17244] Length = 651 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 208/505 (41%), Positives = 318/505 (62%), Gaps = 17/505 (3%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YISTAIAY + +PHIG+ YE+++AD +AR+ RL G DV F TGTDEHGQKI A AG+ Sbjct: 7 YISTAIAYTSGKPHIGNTYEIVLADSIARYKRLTGYDVYFQTGTDEHGQKIETKANEAGI 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + FVD S + D+++ SYD F+RTT+ H + ++KK+ ++GDIYK Y G Sbjct: 67 TPQKFVDNVSEEIHRIWDIMNTSYDKFVRTTDPYHEKKVQQIFKKLYEQGDIYKDEYEGM 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + V + +EE YFF+LS Y D+L+ Y E+HPEFI Sbjct: 127 YCEPCESFFTESQL---IDGKCPDCGRE-VSYEKEEAYFFKLSKYADRLMEYIETHPEFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R+NE+++ F+K GLKDL +SR +F WGI + DP +++YVWIDAL+NY+T GY Sbjct: 183 QPESRKNEMVNNFLKPGLKDLCVSRTSFKWGIPVDFDPGHVVYVWIDALSNYITFLGY-- 240 Query: 247 NPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 +PDG+ K+WPAD+H+IGKDILRFH +YWP L++ +LPLPK++F H ++L K Sbjct: 241 DPDGNHEENYNKYWPADVHLIGKDILRFHTLYWPIMLMALDLPLPKQIFGHPWLLLGEGK 300 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNVI ++++ GVD++RY+L+RE+ +DG + L R+N +L N +GNLV Sbjct: 301 MSKSKGNVIYADDLVDLFGVDSVRYYLLREMPFAQDGTLTYEQLIDRINGELVNILGNLV 360 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 +R+++M K +D ++ P + D ++ + + + E M + A+ +I+L Sbjct: 361 NRTIAMSKKYFDSIVSNPKDIEDIDNELIELTEKTPLLVEEKMNELKVADAINLIIALAR 420 Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++Y D PW L K DR TVLY +E IR + +L+ F+P+ I +L Sbjct: 421 RSNKYIDETMPWVLAKEEDKQDRLRTVLYNLLESIRVIGVLITPFLPETGENIIKML--N 478 Query: 481 DENRCFQSLDQ--RLKPGFMLHKTF 503 +N ++S+ + L+ G L+K F Sbjct: 479 TKNSSYESILKFGGLEEGITLNKAF 503 >gi|260437842|ref|ZP_05791658.1| methionine--tRNA ligase [Butyrivibrio crossotus DSM 2876] gi|292809867|gb|EFF69072.1| methionine--tRNA ligase [Butyrivibrio crossotus DSM 2876] Length = 655 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 205/476 (43%), Positives = 310/476 (65%), Gaps = 9/476 (1%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E++ YI+TAIAY + +PHIG+ YE+++AD +AR+ R+ G DV F TGTDEHGQKI A Sbjct: 2 EKKPYYITTAIAYTSGKPHIGNTYEIVLADSIARYKRMQGYDVRFQTGTDEHGQKIELKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AGVT K FVD + + + D+++ SYD FIRTT++ H + ++KK+ DKGDIYKG Sbjct: 62 AEAGVTPKQFVDNVAGEIKRIWDLMNTSYDKFIRTTDEYHEKQVQKIFKKLYDKGDIYKG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y E+++ + ++ DG+ + V+ +EE YFF++S Y D+L+ Y Sbjct: 122 HYEGMYCTPCESFWTESQL---VDGKCPDCGRK-VKPAKEEAYFFKMSKYADRLIDYINE 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + D ++++YVW+DALTNY+T Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDRHVVYVWLDALTNYITG 237 Query: 242 TGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GY + D + K+WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L Sbjct: 238 LGYDCDGDNDELFKKYWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQG 297 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G+K+SKS GNVI ++ + GVDA+RYF++ E+ DG + + +R+N++LAN +G Sbjct: 298 GDKMSKSKGNVIYADDMADMFGVDAVRYFVLHEMPFENDGVITWELVVERLNSELANTLG 357 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLV+R++SM K + G++ G E D+ + + ++++ M + + A+ + + Sbjct: 358 NLVNRTISMSNKYFGGVVTDKGVTAEVDDDLKNTILEAVKKVDAKMNDLRVADAITETFN 417 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + ++Y D PW L K T DR STVLY VE I A LL+ F+P+ KI Sbjct: 418 IFKRCNKYIDETMPWALAKDETQADRLSTVLYNLVEGISIGAALLEPFMPETTAKI 473 >gi|269957514|ref|YP_003327303.1| methionyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] gi|269306195|gb|ACZ31745.1| methionyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] Length = 541 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 208/490 (42%), Positives = 298/490 (60%), Gaps = 19/490 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + Y++T I Y N PHIGHAY + ADV+ R+HR DV F TGTDEHG+K+ + A Sbjct: 7 KPFYLTTPIYYVNDAPHIGHAYTTVAADVVTRWHRQRQEDVWFLTGTDEHGEKVLRTATA 66 Query: 65 AGVTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ + + D+ + ++ + + LD+ DDFIRTTE RH + + + DKG+IY+G Sbjct: 67 NGVSPQEWADRLVESAWKPVLETLDVRNDDFIRTTEPRHESAVQAFLQDLHDKGEIYQGS 126 Query: 124 YSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSY 179 Y G Y + E Y ++ G +GQ H PV+ + E+ YFFR+SAY D+LL+ Sbjct: 127 YEGPYCVGCEEYKLPGDLVDGTGEFEGQKVCPIHLKPVEMLAEQNYFFRMSAYADRLLAL 186 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 YE HPEF+ P RNEVI FVK GL+DLS+SR TFDWG+ IP D Q+++YVW DAL NY+ Sbjct: 187 YEEHPEFVQPASARNEVIGFVKQGLQDLSISRSTFDWGVPIPWDSQHVLYVWFDALLNYV 246 Query: 240 TTTGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 T GY + D +A + WPA++H++GKDILRFHA+ WPA L++A LPLP +VF+HG++ Sbjct: 247 TAVGYGSSDDAERAQLDRLWPANVHLVGKDILRFHAVIWPAMLMAAGLPLPHQVFAHGWL 306 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L GEK+SKS I P ++I+ G DA RY+ +R IA G DG + + + R N +LAN Sbjct: 307 LVGGEKMSKSRLTGIAPSDIIDTFGSDAFRYYFMRTIAFGGDGSFSWEDMVARYNGELAN 366 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 G GNL SR +M+ K + G++PT GA T + + +V + + + + IH AL Sbjct: 367 GFGNLASRVAAMVGKYFGGVLPTAGARTGLETDLEAVAATAVADAEAAIDRLAIHDALGA 426 Query: 417 VISLVSEVDRYFDAQKPWELKK-----------TNPDRASTVLYVTVEVIRQLAILLQAF 465 V +LV + Y +PW++ K + R +T L VE +R LA+LL Sbjct: 427 VWTLVDAANLYITETQPWKVAKEPGETDASGAGVDGGRLATSLVTAVEALRSLAVLLHPV 486 Query: 466 VPKLANKIFD 475 PK A +++ Sbjct: 487 TPKAAQALWE 496 >gi|319957076|ref|YP_004168339.1| methionyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511] gi|319419480|gb|ADV46590.1| methionyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511] Length = 651 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 215/512 (41%), Positives = 314/512 (61%), Gaps = 13/512 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I Y N PHIGHAY IIAD LA + R+ GL+ F TGTDEHGQKI +AA+ Sbjct: 6 KKAYITTPIYYVNDIPHIGHAYTTIIADTLAIYSRMAGLETFFLTGTDEHGQKIEEAAKK 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G + K + D+ S F+ + D DISYD FIRTT++ H + +KK+ +KGDIYK Y Sbjct: 66 RGKSPKEYADEISGRFKALWDEFDISYDKFIRTTDEDHKLGVQAAFKKMYEKGDIYKDVY 125 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + EA++ + ++ DG++ P Q +EEE YFFRLS YQDKLL +Y + Sbjct: 126 RGHYCISCEAFFTETQL---VDGEFCPECGKPTQIVEEESYFFRLSKYQDKLLEWYRENE 182 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 + ILP RRNEV+ FV+ GL DLS++R +FDWG+K+P +DP+++MYVW+DAL NYLT Sbjct: 183 KCILPKTRRNEVMRFVEGGLDDLSITRTSFDWGVKLPPEINDPKHVMYVWLDALMNYLTA 242 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY D FWPA +H+IGKDILRFHA+YWPAFL+S ++PLPK + +HG+ GE Sbjct: 243 LGY--GTDEKLLDFWPARVHLIGKDILRFHAVYWPAFLMSLDMPLPKHIAAHGWWTRNGE 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNVI+P EV + G++ RYF++RE+ G DG + + L R+N+DL N +GNL Sbjct: 301 KMSKSKGNVINPKEVADAYGLENFRYFMLREVPFGGDGDFSQKALIDRINSDLGNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K +G + + E L+ L ++ + +HR L ++ + Sbjct: 361 LNRLIGMSGKYSEGSV-SSAKVAELYGDELAEVHDSLDKLEPLLFEMQLHRYLEELWKPL 419 Query: 422 SEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 S ++ D +PW L K+ + A +L + ++ +++++L +PK + I L Sbjct: 420 SIANKSIDKYQPWVLMKEGKTEEALALLGLIANILAKVSVMLHPVMPKTTDTIARALGFT 479 Query: 481 DENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510 ++ L +R L F + K P+FPR Sbjct: 480 INQTAYEDLIKRKDLLSDFTIEKV-PPLFPRI 510 >gi|309809130|ref|ZP_07703003.1| methionine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] gi|308170575|gb|EFO72595.1| methionine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] Length = 659 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 208/522 (39%), Positives = 324/522 (62%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + IG+AY + AD +AR+ R +G D F TGTDEHG KI + Sbjct: 1 MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD + +++ + +LDISYD FIRTT++ H + +++++ +GDIY Sbjct: 61 KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVYK G+ + + V+ ++E YFFR+S Y D Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ +P+FILP R E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY++ GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK++F H Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P ++ G+DALRY+L+R I G DG + + +RVN D Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--ESILSVCSRVLQEIRENMQNQLIH 411 LAN +GNL++R++SMI + DG++ P + TE + + + + + + E M Sbjct: 361 LANDLGNLLNRTISMINQYQDGLV-DPASTTEDEYGKQLKELANNTINLYHEQMDALHFS 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +AL + L+S ++Y D PW L K D+ V+ E +R +A+L++ + + Sbjct: 420 KALDTIWGLISRANKYIDETTPWVLNKEGKVDKLKCVMSNLAESLRLIALLIRPIMTQSP 479 Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510 IF+ L ++ ++ SL G+ + K PIFPR Sbjct: 480 VHIFEQLGLSLDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520 >gi|325913210|ref|ZP_08175579.1| methionine--tRNA ligase [Lactobacillus iners UPII 60-B] gi|325477474|gb|EGC80617.1| methionine--tRNA ligase [Lactobacillus iners UPII 60-B] Length = 659 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 207/521 (39%), Positives = 320/521 (61%), Gaps = 12/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + IG+AY + AD +AR+ R +G D F TGTDEHG KI + Sbjct: 1 MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD + +++ + +LDISYD FIRTT++ H + +++++ +GDIY Sbjct: 61 KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVYK G+ + + V+ ++E YFFR+S Y D Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ +P+FILP R E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY++ GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK++F H Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P ++ G+DALRY+L+R I G DG + + +RVN D Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R++SMI + DG++ P E + + + + + E M + Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQMDALHFSK 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL + L+S ++Y D PW L K D V+ E +R +A+L++ + + Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMTQSPV 480 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510 IF+ L ++ ++ SL G+ + K PIFPR Sbjct: 481 HIFEQLGLSSDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520 >gi|328950695|ref|YP_004368030.1| Methionyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] gi|328451019|gb|AEB11920.1| Methionyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] Length = 632 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 213/480 (44%), Positives = 300/480 (62%), Gaps = 12/480 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y NA+PHIGHAY I+AD LAR+HRLDG D F TGTDEHG+KIA+AAQ AG Sbjct: 5 FYVTTPIYYVNAEPHIGHAYTTIVADYLARWHRLDGYDTYFLTGTDEHGEKIAQAAQKAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + K FVD+ S FR+ L I+YDDFIRTTE+RH R + +K+ D GDIY G Y G Sbjct: 65 LEPKAFVDRVSARFREAWAALGIAYDDFIRTTEERHKAVVRAVLQKVYDAGDIYYGEYEG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y + E + + E+ DG+ + P + +E YFFR+ Y+ L ++ E HPEF Sbjct: 125 LYCVGCERFLTEKEL---VDGRCPD-HGVPPERRQEGNYFFRMEKYRPWLRAFIEQHPEF 180 Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P RNEV++ + + DLS+SR + WGI++P DP ++ YVW DAL NY++ GY Sbjct: 181 IRPERYRNEVLAMLAEPIGDLSISRPKRRVPWGIELPWDPDHVTYVWFDALLNYVSALGY 240 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKI 303 ++P ++WPA H+IGKDIL+ HA++WPA L SA +PL + + G++L G K+ Sbjct: 241 PEDPRFE--RYWPAAQHLIGKDILKPHAVFWPAMLKSAGIPLYRHLNVGGYLLGPDGRKM 298 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNV++P E+ E+ G DA+RY+L+RE+A G+DG + GL R NADLAN +GNLV Sbjct: 299 SKSLGNVVNPFELAEKYGTDAVRYYLLRELAYGQDGAVSESGLVDRYNADLANDLGNLVQ 358 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+ +M+LK G++P E D+ ++ + + +R +Q H+AL +V+ Sbjct: 359 RTRTMLLKYLGGVLPKAEPAPE-DQPVVEAATTLAARVRPLVQELRFHQALEEVLQFTRL 417 Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++RY + KPWEL K R VLY VE IR +ILL+ +P A +I + D Sbjct: 418 LNRYVNEHKPWELAKDPARKPRLEQVLYAVVEGIRIASILLEPAMPTKAREIRAAFALGD 477 >gi|194467624|ref|ZP_03073611.1| methionyl-tRNA synthetase [Lactobacillus reuteri 100-23] gi|194454660|gb|EDX43557.1| methionyl-tRNA synthetase [Lactobacillus reuteri 100-23] Length = 675 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 210/520 (40%), Positives = 318/520 (61%), Gaps = 11/520 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +++ YI+T I YP+ + HIG++Y I D ARF RL G DV + TGTDEHG KI + Sbjct: 3 EQKPTYYITTPIYYPSGKLHIGNSYTTIACDAEARFKRLMGYDVFYLTGTDEHGLKIEQK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G+ + +VDQ + +++ L+I+ D FIRTT+ H + +++++ D+GDIYK Sbjct: 63 AEKLGMKPQEYVDQMAAQIKELWKKLEITNDKFIRTTDDYHEKAVQKIFQQLLDQGDIYK 122 Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y+GWYS+ DE Y+ + EVY+ DG + + VQ +EEE YFF++S Y D Sbjct: 123 GKYTGWYSVDDEEYFTESQLAEVYRDEDGNVIGGKAPSGHEVQLVEEESYFFKMSKYADW 182 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L++YY+ HP+FI P R NE+I+ F+K GL+DL+++R +F WG+K+P DP++++YVWIDA Sbjct: 183 LMNYYKEHPDFIEPQSRMNEMINNFLKPGLEDLAVTRTSFTWGVKVPSDPKHVVYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L + LPLPK + HG Sbjct: 243 LSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHIIGHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 ++ + K+SKS GNVI P +++ G+DA RY+L+R + G DG + + +VN DL Sbjct: 303 WLTMRDGKMSKSKGNVIYPETLVDRYGLDATRYYLLRAMPFGNDGVFSPEDFVDKVNYDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +G ++ T A T+ D + S V+ E +E M A Sbjct: 363 ANDLGNLLNRTVAMINKYQNGKLLGTNDATTDFDADLEQTASDVIAEYKELMDKTRFAEA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 LA V LVS ++Y D +PW L K + D S V+ + +R +A L+Q +P Sbjct: 423 LAAVWKLVSRANKYIDETEPWVLAKDDSKKDVLSDVMTHLAKSLRIIAALIQPIMPNAPK 482 Query: 472 KIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 +I + L + + L P + PIFPR Sbjct: 483 QIVEQLGIEGTDLSLTDLQFNDFPAEAQVVAKGTPIFPRL 522 >gi|284033606|ref|YP_003383537.1| methionyl-tRNA synthetase [Kribbella flavida DSM 17836] gi|283812899|gb|ADB34738.1| methionyl-tRNA synthetase [Kribbella flavida DSM 17836] Length = 523 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 215/523 (41%), Positives = 309/523 (59%), Gaps = 17/523 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + Y++T I Y A PHIG AY + DVL R+H G + TGTDEHG+K+ + Sbjct: 1 MSGEKAYYVTTPIYYVTAAPHIGSAYTTVAGDVLTRWHAQRGERKWYLTGTDEHGEKVLR 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADV-LDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 +AQ G++ + + D+ A V +DI+YDDFIRTTE RH + + + + D+GD+ Sbjct: 61 SAQAQGMSPQEWTDKLVEQAWKPAWVDVDIAYDDFIRTTEPRHTERVQEFVQALYDQGDV 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLS 178 YKG Y G Y + E + ++ DG H ++ + E YFFRLSAY DKLL Sbjct: 121 YKGEYEGLYCVGCEEFKLPADIRTDDDGTQRCMIHGTELETVSETNYFFRLSAYADKLLE 180 Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 YE+HPEF+ P RNEVI+FVK GL+DLS++R TFDWGI +P D +++YVW+DAL NY Sbjct: 181 LYETHPEFVAPSSARNEVIAFVKQGLQDLSITRSTFDWGIPVPWDSDHVLYVWVDALLNY 240 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 T GY +PD A+ WPAD+H++GKDILRFHA+ WPA L++A +P+PK+VF+HG++L Sbjct: 241 ATAAGYGADPD-RFAELWPADVHLVGKDILRFHAVIWPAMLIAAGMPVPKQVFAHGWLLV 299 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 GEK+SKS I P E+ + G DA RY+ +R I G DG + + L ++LANG+ Sbjct: 300 GGEKMSKSKLTAIAPKEITDHFGSDAFRYYFLRTIQFGADGSFSWEHLNAVYTSELANGL 359 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNL SR +M+ K +DG +P P +++++ + + + H ALA V Sbjct: 360 GNLASRIAAMVGKYFDGELPEPTDHGPAEQALADKLAETVAAADRAIDTLAFHDALAAVN 419 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 LV V+ Y Q+PW++ K RA +T+LY + EV+R +A+L +PK A K++ + Sbjct: 420 DLVGAVNGYVSEQEPWKVAKDESQRARLATILYTSAEVLRAVAVLHHPTMPKTATKLWTL 479 Query: 477 LFVADENRCFQSLDQR---------LKPGFMLHKTFDPIFPRF 510 L E + DQR L G L K + +FPR Sbjct: 480 L--GAEAKLGPLADQRIPSAGTWGQLPAGSTLTKG-EALFPRL 519 >gi|255505903|ref|ZP_05348810.3| methionine--tRNA ligase [Bryantella formatexigens DSM 14469] gi|255265208|gb|EET58413.1| methionine--tRNA ligase [Bryantella formatexigens DSM 14469] Length = 661 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 210/496 (42%), Positives = 316/496 (63%), Gaps = 15/496 (3%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E++K Y++TAIAY + +PHIG+ YE+I+AD +ARF R G DV F TGTDEHGQKI A Sbjct: 10 EKKKFYMTTAIAYTSGKPHIGNTYEIILADAIARFKRAQGYDVFFQTGTDEHGQKIELKA 69 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AGVT K +VD+ + + + D+++ SYD FIRTT+ H + ++KK+ ++GDIYKG Sbjct: 70 AEAGVTPKEYVDKVAGEVKRIWDLVNASYDKFIRTTDDYHEKQVQKIFKKLYEQGDIYKG 129 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y E+++ + ++ DG+ + V+ +EE YFFR+S Y D+L+ + + Sbjct: 130 SYEGMYCTPCESFWTESQL---VDGKCPDCGRE-VKPAKEEAYFFRMSKYADRLIEHINT 185 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + D ++++YVW+DALTNY+T Sbjct: 186 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYITG 245 Query: 242 TGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 GY + DG K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L Sbjct: 246 IGY--DCDGESTEQFKKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLL 303 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 K+SKS GNV+ E+++ GVDA+RYF++ E+ DG + L +R+N+DLAN Sbjct: 304 QGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFDNDGVITWELLVERLNSDLANT 363 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 +GNLV+R++SM K + G++ G D + +V +++ E M+ + A++ + Sbjct: 364 LGNLVNRTISMSNKYFGGVVADKGVTEPVDAELEAVALETPKKVTEKMEKLRVADAISDI 423 Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 L ++Y D PW L K T DR +TVLY VE I A LL+ F+P A K+ Sbjct: 424 FVLFKRCNKYIDETMPWALAKDETKQDRLATVLYNLVECISIGAELLEPFMPDTAEKVLA 483 Query: 476 ILFVADENRCFQSLDQ 491 L + R ++++Q Sbjct: 484 QLNA--QKRGMEAMEQ 497 >gi|257468429|ref|ZP_05632523.1| methionyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] gi|317062695|ref|ZP_07927180.1| methionyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] gi|313688371|gb|EFS25206.1| methionyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] Length = 641 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 211/513 (41%), Positives = 311/513 (60%), Gaps = 11/513 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + Y++T I Y N PH+G AY I ADV+AR+ + G DV F TGTDEHGQK+ + A+ Sbjct: 3 KNFYVTTPIYYVNGDPHVGSAYTTIAADVIARYKKTMGYDVFFLTGTDEHGQKVEETAKQ 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G T + + D + F +M L+I Y DFIRTTE RH + + + KK+ + GDIYKG Y Sbjct: 63 KGYTPQEWTDIMAPKFVEMWKALNIEYTDFIRTTEPRHKEAVKKILKKVYENGDIYKGEY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG Y + E + ++++ +G + ++ ++EE YFF++S YQD LL++ +SHP Sbjct: 123 SGKYCVSCETFVPENQI---VNGNHCPDCGKELRVVKEESYFFKMSKYQDALLAHIDSHP 179 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FILP R+NEV+SF+K GL+DLS+SR TF+WGI I P +I YVW DALTNYLT GY Sbjct: 180 DFILPRSRKNEVVSFIKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTAVGY 239 Query: 245 LDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 +NP+ KFW +H++GKDI+RFHAI WP LLSA + LP + +HG+ +GEK Sbjct: 240 ENNPELFD-KFWTNGEVVHLLGKDIVRFHAIIWPCMLLSAGVKLPDNIVAHGWWTSEGEK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ ++ GVDA RY L+RE+ G DG Y + R+N+DLAN +GNL+ Sbjct: 299 MSKSKGNVVDPVAETKKYGVDAFRYCLLREVQFGNDGDYSTKSVVTRINSDLANDLGNLL 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 +R++ M K ++G+I D+ I ++ + L+E+ E M ++L + +S Sbjct: 359 NRTLGMYKKYFNGVIAAGTTRDAFDDEIENLWNETLKEVTEQMNIVQFSKSLEAIWKFIS 418 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +++Y D PW L K DR + V+ V + + A+++ +P A KI+D L V Sbjct: 419 RLNKYIDETMPWALAKDEDKKDRLAVVMNHLVNGLYKTAVMIYPCMPTAAQKIWDQLGVQ 478 Query: 481 DENRCFQSLDQR---LKPGFMLHKTFDPIFPRF 510 R + + L P + +PIFPR Sbjct: 479 KPVRDAKVAEVEGWDLLPAGHVLGNAEPIFPRL 511 >gi|312874747|ref|ZP_07734766.1| methionine--tRNA ligase [Lactobacillus iners LEAF 2053A-b] gi|311089492|gb|EFQ47917.1| methionine--tRNA ligase [Lactobacillus iners LEAF 2053A-b] Length = 659 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 207/521 (39%), Positives = 321/521 (61%), Gaps = 12/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + IG+AY + AD +AR+ R +G D F TGTDEHG KI + Sbjct: 1 MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD + +++ + +LDISYD FIRTT++ H + +++++ +GDIY Sbjct: 61 KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVYK G+ + + V+ ++E YFFR+S Y D Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ +P+FILP R E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY++ GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK++F H Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P ++ G+DALRY+L+R I G DG + + +RVN D Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R++SMI + DG++ P E + + + + + E M + Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANNTINLYHEQMDALHFSK 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL + L+S ++Y D PW L K D+ V+ E +R +A+L++ + + Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDKLKCVMSNLAESLRLIALLIRPIMTQSPV 480 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510 IF+ L ++ ++ SL G+ + K PIFPR Sbjct: 481 HIFEQLGLSLDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520 >gi|168205784|ref|ZP_02631789.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|170662741|gb|EDT15424.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] Length = 645 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 197/473 (41%), Positives = 301/473 (63%), Gaps = 7/473 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ HIG+ Y + AD +ARF RL G +V+F TGTDEHGQKI + A Sbjct: 3 KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K VD+ +D+ +++ISYD FIRTT+ H + ++KK+ D+GDIYK Sbjct: 63 EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ G PV+ +EE YFF++S Y D+L+ Y E H Sbjct: 123 YEGLYCTPCESFWTETQLVNGNCPDC----GRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI P R+NE+++ F++ GL+DL +SR +F WGI + D ++++YVWIDAL+NY+T Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY KFWPAD+H+IGKDILRFH IYWP L++ L LPK+VF HG++L G K Sbjct: 239 GYGQENQELYNKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ ++ G DA+RY+L+REI G DG ++ + K+VN DLAN +GNL+ Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+++M+ K +DG+I P D+ ++++ ++ ++ I AL + +L+S Sbjct: 359 SRTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++Y D PW L K +R TVLY +E +R +++++ F+ + + KI Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKI 471 >gi|312871229|ref|ZP_07731327.1| methionine--tRNA ligase [Lactobacillus iners LEAF 3008A-a] gi|312872811|ref|ZP_07732876.1| methionine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|311091853|gb|EFQ50232.1| methionine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|311093243|gb|EFQ51589.1| methionine--tRNA ligase [Lactobacillus iners LEAF 3008A-a] Length = 659 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 207/521 (39%), Positives = 320/521 (61%), Gaps = 12/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + IG+AY + AD +AR+ R +G D F TGTDEHG KI + Sbjct: 1 MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD + +++ + +LDISYD FIRTT++ H + +++++ +GDIY Sbjct: 61 KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVYK G+ + + V+ ++E YFFR+S Y D Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ +P+FILP R E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY++ GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK++F H Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P ++ G+DALRY+L+R I G DG + + +RVN D Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R++SMI + DG++ P E + + + + + E M + Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSATEDEYGKQLKELANHTINLYHEQMDALHFSK 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL + L+S ++Y D PW L K D V+ E +R +A+L++ + + Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMTQSPV 480 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510 IF+ L ++ ++ SL G+ + K PIFPR Sbjct: 481 HIFEQLGLSLDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520 >gi|309804975|ref|ZP_07699033.1| methionine--tRNA ligase [Lactobacillus iners LactinV 09V1-c] gi|308165735|gb|EFO67960.1| methionine--tRNA ligase [Lactobacillus iners LactinV 09V1-c] Length = 659 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 207/521 (39%), Positives = 321/521 (61%), Gaps = 12/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + IG+AY + AD +AR+ R +G D F TGTDEHG KI + Sbjct: 1 MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD + +++ + +LDISYD FIRTT++ H + +++++ +GDIY Sbjct: 61 KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVYK G+ + + V+ ++E YFFR+S Y D Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ +P+FILP R E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY++ GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK++F H Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P ++ G+DALRY+L+R I G DG + + +RVN D Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R++SMI + DG++ P E + + + + + E M + Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANNTINLYHEQMDALHFSK 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL + L+S ++Y D PW L K D+ V+ E +R +A+L++ + + Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDKLKCVMSNLAESLRLIALLIRPIMTQSPV 480 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510 IF+ L ++ ++ SL G+ + K PIFPR Sbjct: 481 HIFEQLGLSLDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520 >gi|168209762|ref|ZP_02635387.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] gi|168217641|ref|ZP_02643266.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239] gi|170712109|gb|EDT24291.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] gi|182380303|gb|EDT77782.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239] Length = 645 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 197/473 (41%), Positives = 301/473 (63%), Gaps = 7/473 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ HIG+ Y + AD +ARF RL G +V+F TGTDEHGQKI + A Sbjct: 3 KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K VD+ +D+ +++ISYD FIRTT+ H + ++KK+ D+GDIYK Sbjct: 63 EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ G PV+ +EE YFF++S Y D+L+ Y E H Sbjct: 123 YEGLYCTPCESFWTETQLVNGNCPDC----GRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI P R+NE+++ F++ GL+DL +SR +F WGI + D ++++YVWIDAL+NY+T Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY KFWPAD+H+IGKDILRFH IYWP L++ L LPK+VF HG++L G K Sbjct: 239 GYGQEDQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ ++ G DA+RY+L+REI G DG ++ + K+VN DLAN +GNL+ Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+++M+ K +DG+I P D+ ++++ ++ ++ I AL + +L+S Sbjct: 359 SRTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++Y D PW L K +R TVLY +E +R +++++ F+ + + KI Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKI 471 >gi|110801166|ref|YP_697211.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|110675813|gb|ABG84800.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124] Length = 645 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 197/473 (41%), Positives = 301/473 (63%), Gaps = 7/473 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ HIG+ Y + AD +ARF RL G +V+F TGTDEHGQKI + A Sbjct: 3 KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K VD+ +D+ +++ISYD FIRTT+ H + ++KK+ D+GDIYK Sbjct: 63 EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ G PV+ +EE YFF++S Y D+L+ Y E H Sbjct: 123 YEGLYCTPCESFWTETQLVNGNCPDC----GRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI P R+NE+++ F++ GL+DL +SR +F WGI + D ++++YVWIDAL+NY+T Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY KFWPAD+H+IGKDILRFH IYWP L++ L LPK+VF HG++L G K Sbjct: 239 GYGQEDQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ ++ G DA+RY+L+REI G DG ++ + K+VN DLAN +GNL+ Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+++M+ K +DG+I P D+ ++++ ++ ++ I AL + +L+S Sbjct: 359 SRTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++Y D PW L K +R TVLY +E +R +++++ F+ + + KI Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKI 471 >gi|210617035|ref|ZP_03291370.1| hypothetical protein CLONEX_03592 [Clostridium nexile DSM 1787] gi|210149558|gb|EEA80567.1| hypothetical protein CLONEX_03592 [Clostridium nexile DSM 1787] Length = 643 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 203/479 (42%), Positives = 307/479 (64%), Gaps = 13/479 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++K Y++TAIAY + +PHIG+ YE ++AD +AR+ R G DV F TGTDEHGQKI A Sbjct: 14 DKKKFYMTTAIAYTSGKPHIGNTYEFVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKA 73 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + AGV+ K FVD+ + + +AD+++ SYD FIRTT+ H + ++K++ ++GDIYKG Sbjct: 74 EEAGVSPKEFVDKVAGEVKAIADMMNTSYDKFIRTTDDYHEKQVQKIFKRLYEQGDIYKG 133 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y E+++ + ++ DG+ + VQ +EE YFF++S Y D+L+ + + Sbjct: 134 HYEGMYCTPCESFFTESQL---VDGKCPDCGRE-VQPAQEEAYFFKMSKYADRLIEHINT 189 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+T Sbjct: 190 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 249 Query: 242 TGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 GY + DG K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H ++L Sbjct: 250 IGY--DCDGESTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLL 307 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 K+SKS GNVI E++ GVDA+RYF++ E+ DG + + +R+N+DLAN Sbjct: 308 QGDGKMSKSKGNVIYADELVNMFGVDAVRYFVLHEMPFENDGVITWELMVERMNSDLANT 367 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 +GNLV+R+VSM K + G + G + D + +V + E M + A+ ++ Sbjct: 368 LGNLVNRTVSMTNKYFGGSVTDKGVAGDVDADLKAVVDGTPAAVEEKMDKLRVADAITEI 427 Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +L ++Y D PW L K DR TVLY ++ I + A LL +F+P+ A KI Sbjct: 428 FNLFKRCNKYIDETMPWVLAKDEAQKDRLETVLYNLIDSISKGAELLSSFMPETAEKIL 486 >gi|169343256|ref|ZP_02864267.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] gi|182624314|ref|ZP_02952099.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] gi|169298554|gb|EDS80635.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] gi|177910532|gb|EDT72905.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] Length = 645 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 197/473 (41%), Positives = 301/473 (63%), Gaps = 7/473 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ HIG+ Y + AD +ARF RL G +V+F TGTDEHGQKI + A Sbjct: 3 KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K VD+ +D+ +++ISYD FIRTT+ H + ++KK+ D+GDIYK Sbjct: 63 EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ G PV+ +EE YFF++S Y D+L+ Y E H Sbjct: 123 YEGLYCTPCESFWTETQLVNGNCPDC----GRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI P R+NE+++ F++ GL+DL +SR +F WGI + D ++++YVWIDAL+NY+T Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY KFWPAD+H+IGKDILRFH IYWP L++ L LPK+VF HG++L G K Sbjct: 239 GYGQENQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ ++ G DA+RY+L+REI G DG ++ + K+VN DLAN +GNL+ Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+++M+ K +DG+I P D+ ++++ ++ ++ I AL + +L+S Sbjct: 359 SRTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++Y D PW L K +R TVLY +E +R +++++ F+ + + KI Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKI 471 >gi|312874068|ref|ZP_07734103.1| methionine--tRNA ligase [Lactobacillus iners LEAF 2052A-d] gi|311090408|gb|EFQ48817.1| methionine--tRNA ligase [Lactobacillus iners LEAF 2052A-d] Length = 659 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 207/524 (39%), Positives = 320/524 (61%), Gaps = 18/524 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + IG+AY + AD +AR+ R +G D F TGTDEHG KI + Sbjct: 1 MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD + +++ + +LDISYD FIRTT++ H + +++++ +GDIY Sbjct: 61 KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVYK G+ + + V+ ++E YFFR+S Y D Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ +P+FILP R E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY++ GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK++F H Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P ++ G+DALRY+L+R I G DG + + +RVN D Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R++SMI + DG++ P E + + + + + E M + Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQMDALHFSK 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL + L+S ++Y D PW L K D V+ E +R +A+L++ + + Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMTQSPV 480 Query: 472 KIFDILFVA--DENR---CFQSLDQRLKPGFMLHKTFDPIFPRF 510 IF+ L ++ D N C+ + + + K PIFPR Sbjct: 481 HIFEQLGLSLDDANAASLCWGAYGWK----NYVTKNPKPIFPRL 520 >gi|58336554|ref|YP_193139.1| methionyl-tRNA synthetase [Lactobacillus acidophilus NCFM] gi|58253871|gb|AAV42108.1| met-tRNA synthetase [Lactobacillus acidophilus NCFM] Length = 658 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 207/524 (39%), Positives = 322/524 (61%), Gaps = 18/524 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + IG+AY I AD +AR+ R G D F TGTDEHG KI + Sbjct: 1 MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGFDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ K FVD+ + +++ + L+ISYD FIRTT++ H + +++K+ KGDIY Sbjct: 61 KAEAQGIKPKEFVDKMADSYKKLWKSLNISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVYK +G + + V+ ++E YFF++S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YY+ HP+FILP R E+++ F+K GL+DLS++R T +WGI +P DP++++YVWID Sbjct: 181 RLVEYYKEHPDFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK + H Sbjct: 241 ALSNYITALGYGSDNDALFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P + GVD LRY+L+R + G DG + + +R+N D Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGVDPLRYYLMRALPFGADGIFTPEDFVERINYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+VSMI + +G + P P A + + + + V+ + RE M + + Sbjct: 361 LANDLGNLLNRTVSMINQYQNGQVAPVPVAQDKFGKELQDTAASVIADYREYMDSLHFSQ 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL + LV+ ++Y D PW L K + S V+ E +R +A++++ + + A Sbjct: 421 ALDSIWKLVARANKYIDETTPWVLNKEGKIEELSHVMSNLAESLRLIAVMIEPVMTETAP 480 Query: 472 KIFDILFV----ADENR-CFQSLDQRLKPGFMLHKTFDPIFPRF 510 K+F+ L + DE + F K + + PIFPR Sbjct: 481 KMFEQLGLNWNDEDERKLAFNDFGWNTK----VVEKPTPIFPRL 520 >gi|325912366|ref|ZP_08174762.1| methionine--tRNA ligase [Lactobacillus iners UPII 143-D] gi|329920621|ref|ZP_08277308.1| methionine--tRNA ligase [Lactobacillus iners SPIN 1401G] gi|325475837|gb|EGC79007.1| methionine--tRNA ligase [Lactobacillus iners UPII 143-D] gi|328935879|gb|EGG32339.1| methionine--tRNA ligase [Lactobacillus iners SPIN 1401G] Length = 659 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 207/521 (39%), Positives = 320/521 (61%), Gaps = 12/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + IG+AY + AD +AR+ R +G D F TGTDEHG KI + Sbjct: 1 MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD + +++ + +LDISYD FIRTT++ H + +++++ +GDIY Sbjct: 61 KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVYK G+ + + V+ ++E YFFR+S Y D Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ +P+FILP R E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY++ GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK++F H Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P ++ G+DALRY+L+R I G DG + + +RVN D Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R++SMI + DG++ P E + + + + + E M + Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQMDALHFSK 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL + L+S ++Y D PW L K D V+ E +R +A+L++ + + Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMTQSPV 480 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510 IF+ L ++ ++ SL G+ + K PIFPR Sbjct: 481 HIFEQLGLSLDDANAASLCWGAY-GWQNYVTKNPKPIFPRL 520 >gi|227877968|ref|ZP_03995972.1| methionine--tRNA ligase [Lactobacillus crispatus JV-V01] gi|256844348|ref|ZP_05549834.1| methionyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|256849249|ref|ZP_05554682.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|262047264|ref|ZP_06020222.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] gi|293381475|ref|ZP_06627470.1| methionyl-tRNA synthetase, alpha subunit [Lactobacillus crispatus 214-1] gi|312978357|ref|ZP_07790099.1| methionine--tRNA ligase [Lactobacillus crispatus CTV-05] gi|227862438|gb|EEJ69953.1| methionine--tRNA ligase [Lactobacillus crispatus JV-V01] gi|256613426|gb|EEU18629.1| methionyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|256714025|gb|EEU29013.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|260572509|gb|EEX29071.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] gi|290921945|gb|EFD98952.1| methionyl-tRNA synthetase, alpha subunit [Lactobacillus crispatus 214-1] gi|310894700|gb|EFQ43772.1| methionine--tRNA ligase [Lactobacillus crispatus CTV-05] Length = 658 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 211/524 (40%), Positives = 321/524 (61%), Gaps = 18/524 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + IG+AY I AD +AR+ R G D F TGTDEHG KI + Sbjct: 1 MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGYDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD+ + +++ + L+ISYD FIRTT+K H + +++K+ KGDIY Sbjct: 61 KAEAQGIKPQEFVDKMAASYKKLWKSLNISYDKFIRTTDKEHVAAVQKIFEKLLAKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVYK DG + + V+ ++E YFF++S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDDGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YY+ HPEFILP R E+++ F+K GL+DLS++R T +WGI + DP++++YVWID Sbjct: 181 RLVEYYKEHPEFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVLSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK + H Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P + GVD LRY+L+R + G DG + + +R+N D Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGVDPLRYYLMRALPFGDDGIFTPEDFVERINYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+VSMI + G + P A E + + + V+ + RENM + + Sbjct: 361 LANDLGNLLNRTVSMINQYQAGHVDAVPVAQAEFGKDLQDTAASVINDYRENMDSLHFSK 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL + LVS ++Y D PW L K+ + S V+ E +R +AI+++ + + A Sbjct: 421 ALDNIWKLVSRANKYIDETTPWALNKEGKKEELSKVMSNLAESLRLIAIMIEPVMTETAP 480 Query: 472 KIFDILFVADENR-----CFQSLDQRLKPGFMLHKTFDPIFPRF 510 +F L + +N F D +K ++ K PIFPR Sbjct: 481 IMFKQLGLNWDNEDAKHLAFGDFDWDVK---VIEKP-QPIFPRL 520 >gi|186680640|ref|YP_001863836.1| methionyl-tRNA synthetase [Nostoc punctiforme PCC 73102] gi|186463092|gb|ACC78893.1| methionyl-tRNA synthetase [Nostoc punctiforme PCC 73102] Length = 534 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 214/530 (40%), Positives = 313/530 (59%), Gaps = 30/530 (5%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K + ++T + Y N PHIG AY I ADV+ARFHRL G VL TGTDEHGQKI ++ Sbjct: 6 KTEKTFALTTPLYYVNDVPHIGSAYTTIAADVVARFHRLLGHQVLLITGTDEHGQKIQRS 65 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A++ G + F D+ +F + +LDI YD F RTT RH + ++++ + GDIY+ Sbjct: 66 AESLGKAPQEFCDEVVPSFISLWQLLDIKYDRFSRTTAPRHEAIVKEFFERVWESGDIYQ 125 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 G GWY + E + + ++ +G + + V+W +E+ YFFRLS YQ+KL +Y+ Sbjct: 126 GQQQGWYCVSCEEFKEERDLLEGHRCPIHTNKE--VEWRDEQNYFFRLSKYQNKLTEFYQ 183 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 S P FI P RRNEV+SFV GL+D S+SR DWG +P DP++ +YVW DAL Y+T Sbjct: 184 SKPNFIQPESRRNEVLSFVNQGLQDFSISRVNLDWGFPVPVDPKHTLYVWFDALLGYVTA 243 Query: 242 TGYLDNPDGSKA------KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 L PD +WP +LH+IGKDILRFHA+YWPA LLSA LPLP++VF HGF Sbjct: 244 ---LLEPDAEPTLANALETWWPINLHLIGKDILRFHAVYWPAMLLSAGLPLPERVFGHGF 300 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + G+K+ KSLGN +DP+ +++ G DA+RY+ ++EI GKDG +++ +NADLA Sbjct: 301 LTKDGQKMGKSLGNTLDPVSLVQRYGSDAVRYYFLKEIEFGKDGDFNEVRFINVLNADLA 360 Query: 356 NGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESIL-SVCSRVLQEIRENMQNQLIHRA 413 N +GNL++R++SM+ K D +P+ G SDE+ L ++ R+ ++++E + +A Sbjct: 361 NDLGNLLNRTLSMVKKYCVDNNVPSIGNEGISDENPLKTIGLRLGEQVKEAYKELAFSQA 420 Query: 414 LAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 ++SL +++ D Q PW L K+ + VLY +E +R A LL +P +++ Sbjct: 421 CGAILSLAQASNKFIDEQAPWSLYKQGQQESVEKVLYAVLESVRLAAYLLSPIIPNISSD 480 Query: 473 IFDIL-FVADENRCFQSLDQRLKPGFMLHK------------TFDPIFPR 509 I+ L F D N QS + F H TF P+F R Sbjct: 481 IYQQLGFGIDFNDQIQS---SVTAPFATHATWGILSSKQQLGTFQPVFKR 527 >gi|259500883|ref|ZP_05743785.1| methionyl-tRNA synthetase [Lactobacillus iners DSM 13335] gi|302190664|ref|ZP_07266918.1| methionyl-tRNA synthetase [Lactobacillus iners AB-1] gi|259167577|gb|EEW52072.1| methionyl-tRNA synthetase [Lactobacillus iners DSM 13335] Length = 659 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 207/521 (39%), Positives = 320/521 (61%), Gaps = 12/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + IG+AY + AD +AR+ R +G D F TGTDEHG KI + Sbjct: 1 MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD + +++ + +LDISYD FIRTT++ H + +++++ +GDIY Sbjct: 61 KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVYK G+ + + V+ ++E YFFR+S Y D Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ +P+FILP R E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY++ GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK++F H Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P ++ G+DALRY+L+R I G DG + + +RVN D Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R++SMI + DG++ P E + + + + + E M + Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQMDALHFSK 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL + L+S ++Y D PW L K D V+ E +R +A+L++ + + Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMTQSPV 480 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510 IF+ L ++ ++ SL G+ + K PIFPR Sbjct: 481 HIFEQLGLSLDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520 >gi|227903105|ref|ZP_04020910.1| methionyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] gi|227869091|gb|EEJ76512.1| methionyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] Length = 661 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 207/524 (39%), Positives = 322/524 (61%), Gaps = 18/524 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + IG+AY I AD +AR+ R G D F TGTDEHG KI + Sbjct: 4 MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGFDTFFLTGTDEHGLKIEQ 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ K FVD+ + +++ + L+ISYD FIRTT++ H + +++K+ KGDIY Sbjct: 64 KAEAQGIKPKEFVDKMADSYKKLWKSLNISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIY 123 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVYK +G + + V+ ++E YFF++S Y D Sbjct: 124 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 183 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YY+ HP+FILP R E+++ F+K GL+DLS++R T +WGI +P DP++++YVWID Sbjct: 184 RLVEYYKEHPDFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVPSDPKHVVYVWID 243 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK + H Sbjct: 244 ALSNYITALGYGSDNDALFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 303 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P + GVD LRY+L+R + G DG + + +R+N D Sbjct: 304 GWVLMKNGKMSKSKGNAVYPESLTSRYGVDPLRYYLMRALPFGADGIFTPEDFVERINYD 363 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+VSMI + +G + P P A + + + + V+ + RE M + + Sbjct: 364 LANDLGNLLNRTVSMINQYQNGQVAPVPVAQDKFGKELQDTAASVIADYREYMDSLHFSQ 423 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL + LV+ ++Y D PW L K + S V+ E +R +A++++ + + A Sbjct: 424 ALDSIWKLVARANKYIDETTPWVLNKEGKIEELSHVMSNLAESLRLIAVMIEPVMTETAP 483 Query: 472 KIFDILFV----ADENR-CFQSLDQRLKPGFMLHKTFDPIFPRF 510 K+F+ L + DE + F K + + PIFPR Sbjct: 484 KMFEQLGLNWNDEDERKLAFNDFGWNTK----VVEKPTPIFPRL 523 >gi|304438970|ref|ZP_07398893.1| methionine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372636|gb|EFM26219.1| methionine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 664 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 211/509 (41%), Positives = 313/509 (61%), Gaps = 7/509 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K Y++T I YP+ HIGH Y + AD L +F L G DV FTTG+DEHGQK+ + A Sbjct: 3 KKYYLTTPIYYPSDNLHIGHTYCTVAADALKKFKILQGYDVYFTTGSDEHGQKLMQKAHE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ K ++D N + + +DI YD FIR+T++ H + +++K+ DKG+IYK Y Sbjct: 63 YGMEPKEYIDHIVDNIKALWKTMDIDYDYFIRSTDEIHEKNVQNIFQKLYDKGEIYKSEY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G+Y E+++ + ++ +G +EE YFFRLS Y+DKL+ Y HP Sbjct: 123 EGYYCTPCESFWTESQL---GEGHTCPDCGRETHLAKEEAYFFRLSKYRDKLIELYNEHP 179 Query: 185 EFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 EFI+P R+NE++ +F++ GL DLS+SR +F WG+K+P D +I+YVWIDAL+ YLT G Sbjct: 180 EFIVPESRKNEMVKNFLEGGLDDLSVSRSSFKWGVKVPFDDNHIVYVWIDALSCYLTGLG 239 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y N D +FWPAD+H++GK+I+RFH I WPA L++ ++PLPK+VF HG+IL +K+ Sbjct: 240 YGWN-DEQFNEFWPADVHLVGKEIMRFHTIIWPAILMALDMPLPKQVFGHGWILFDNDKM 298 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+ P +I+ GVDAL+YFL+RE + G DG + K+ R+N+DLAN +GNLVS Sbjct: 299 SKSKGNVVYPEPIIKLYGVDALKYFLLREFSFGSDGSFTKEKFMARLNSDLANDLGNLVS 358 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+VSMI+K DG+I A TE D+S++ + + + ++ + M+ AL + +LV Sbjct: 359 RTVSMIIKYNDGVIEKTDAKTEFDDSLIELATSIRSKVEKAMETYQFSDALEAIWTLVRR 418 Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++Y D PW L K D + VLY E +R ++IL+ F+ A +I L + Sbjct: 419 GNKYVDETTPWILAKDEAKKDELNNVLYNLAESLRIVSILISPFLTNTAKEIRRQLGIEG 478 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 E + + + L D IFPR Sbjct: 479 EIKLEDASEFGLLASGAKVTKGDVIFPRL 507 >gi|303234887|ref|ZP_07321512.1| methionine--tRNA ligase [Finegoldia magna BVS033A4] gi|302494005|gb|EFL53786.1| methionine--tRNA ligase [Finegoldia magna BVS033A4] Length = 666 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 203/475 (42%), Positives = 311/475 (65%), Gaps = 8/475 (1%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 KE++ YI+T I YP++ H+GH Y IIAD L +F ++ G DV TTGTDEHGQK+ + Sbjct: 3 KEKKSYYITTPIYYPSSNLHLGHTYTTIIADTLKKFKKIQGYDVFLTTGTDEHGQKLYEK 62 Query: 62 AQ--NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ N G ++D ++ +D+ LDI D F+R+T+K H + +++K+ DKGDI Sbjct: 63 AKEKNMGDNPLNYIDPIVQSAKDLWKKLDIDIDSFVRSTDKVHEKNVQEIFQKLYDKGDI 122 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 YK Y G Y + EA++ + ++ DG+ + + V + EEE YFFRLS Y+D++L Sbjct: 123 YKSTYKGHYCVDCEAFWTESQL---KDGKCPDCGRD-VHYHEEESYFFRLSKYKDRILQL 178 Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 Y+ +P+F+ P R+NE+++ F+ L+DLS+SR +FDWG+K+P D ++I+YVWIDAL+ Y Sbjct: 179 YKDNPDFLKPESRKNEMVNNFLSGELEDLSVSRTSFDWGVKVPFDDKHIIYVWIDALSCY 238 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 LT GY + D KFWP D+H++GK+I+RFH I WPA L++ +LPLPK+VF+HG+IL Sbjct: 239 LTGIGYGQD-DELFNKFWPCDIHLVGKEIVRFHTIIWPALLMALDLPLPKRVFAHGWILF 297 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 +K+SKS GNV P +I+ GVDAL+Y+++R+ G DG + + R N+DL N + Sbjct: 298 NEDKMSKSKGNVYYPEPIIDLYGVDALKYYILRDFTFGNDGNFTTERFMNRFNSDLVNDL 357 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNLVSRSVSM+ K +DG+IP P + D++++SV +++ E ++ AL ++ Sbjct: 358 GNLVSRSVSMVEKYFDGVIPQPNDNNDIDKNLISVVEGCQEKVEELLEELDFSNALEEIW 417 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +V ++Y D PW L K +P+R TVLY ++ IR + IL F+ + +NKI Sbjct: 418 KVVRRANKYIDETTPWILIKEDPERLKTVLYNLMDAIRVICILTSPFITETSNKI 472 >gi|282900792|ref|ZP_06308732.1| Methionyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii CS-505] gi|281194322|gb|EFA69279.1| Methionyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii CS-505] Length = 529 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 202/481 (41%), Positives = 299/481 (62%), Gaps = 7/481 (1%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K + ++T + Y N PHIG AY I AD +ARF RL G +V+F TGTDEHGQKI ++ Sbjct: 6 KTSKTFALTTPLYYVNDVPHIGSAYTTIAADTIARFQRLLGNEVIFITGTDEHGQKIQRS 65 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 AQ+ G + + F DQ +F D+ +L+I YD F RTT+ +H + + ++ ++GDIY+ Sbjct: 66 AQSQGKSPQEFCDQIVPSFIDLWQILNIQYDRFSRTTDLKHQVIVKEFFHRVWEQGDIYR 125 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 G GWY + E + + E+ +G + + V+W +E+ YFFRLS YQ L +Y+ Sbjct: 126 GEQKGWYCVSCEEFKEERELIEGKRCPIHTTKE--VEWRDEQNYFFRLSKYQKPLEEFYQ 183 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 SHP FI P RRNEV+SFV GL+D S+SR DWG +P D Q+ +YVW DAL Y+T Sbjct: 184 SHPNFIQPASRRNEVLSFVSQGLQDFSISRVNLDWGFPVPVDTQHTLYVWFDALLGYITA 243 Query: 242 ---TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 G + + +K+WP +LH+IGKDILRFHA+YWPA L+SANLPLPK+VF HGF+ Sbjct: 244 LLEPGTEPTLENAVSKWWPINLHLIGKDILRFHAVYWPAMLMSANLPLPKQVFGHGFLTK 303 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 G+K+ K+LGN +DP+ ++++ G DA+RY+ ++EI GKDG +++ +NADLAN + Sbjct: 304 DGQKMGKTLGNTVDPVALVKKYGSDAVRYYFLKEIEFGKDGDFNEIRFIHVLNADLANDL 363 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ-V 417 GNL++R+++M+ K G IP+ E+ L L E + + L +AQ V Sbjct: 364 GNLLNRTLNMVKKYCAGEIPSIAPQDIPPENTLKTIGGQLGEKVKQAYSVLAFNEVAQAV 423 Query: 418 ISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 + LV +++ D Q PW L K+ + +TVLY +E +R A LL +P +++ I+ Sbjct: 424 MLLVQASNKFIDEQAPWSLYKQGKQNEVATVLYTVLESVRLTAYLLSPIIPNISSDIYQQ 483 Query: 477 L 477 L Sbjct: 484 L 484 >gi|323690917|ref|ZP_08105209.1| methionine-tRNA ligase [Clostridium symbiosum WAL-14673] gi|323505042|gb|EGB20812.1| methionine-tRNA ligase [Clostridium symbiosum WAL-14673] Length = 657 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 206/478 (43%), Positives = 304/478 (63%), Gaps = 13/478 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+TAIAY + +PHIG+ YE+I+AD +AR+ R G DV F TGTDEHGQKI A+ Sbjct: 6 KKPYYITTAIAYTSGKPHIGNTYEIILADSIARYKREQGFDVRFQTGTDEHGQKIELKAE 65 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AGVT + FVD + + + D+++ SYD FIRTT+K H + + ++KK+ DKGDIYKG Sbjct: 66 EAGVTPQEFVDGVAAQIKSIWDLMNTSYDKFIRTTDKEHEEQVQKIFKKLYDKGDIYKGH 125 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ +V DG+ + PV +EE YFF++S Y +L+ + H Sbjct: 126 YEGLYCTPCESFWTSSQV---TDGKCPDCGR-PVVPAKEEAYFFKMSKYAQQLIDHINEH 181 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP+++ YVW+DALTNY+T Sbjct: 182 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVSFDPKHVTYVWLDALTNYITGL 241 Query: 243 GYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 GY + DG+ K+WPADLH+IGKDI+RFH IYWP FL++ LPLPK+VF H ++L Sbjct: 242 GY--DCDGNHGELFGKYWPADLHLIGKDIIRFHTIYWPIFLMALELPLPKQVFGHPWLLQ 299 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K+SKS GNV+ +++ GVDA+RYF++ E+ DG + + +R+N+DLAN + Sbjct: 300 GDGKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANIL 359 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNLV+R++SM K + G + GA E+D + + ++ + E M + A+ ++ Sbjct: 360 GNLVNRTISMSNKYFGGEVADKGAAGEADADLKATVLEAVKRVDEKMDKLRVADAITEIF 419 Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + ++Y D PW L K DR +TVLY E I A LL +F+P+ A KI Sbjct: 420 GIFRRSNKYIDETMPWTLAKDEAQKDRLATVLYNLTEAITIGASLLYSFMPETAEKIL 477 >gi|295089976|emb|CBK76083.1| methionyl-tRNA synthetase [Clostridium cf. saccharolyticum K10] Length = 661 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 207/491 (42%), Positives = 309/491 (62%), Gaps = 15/491 (3%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI A AGV Sbjct: 10 YITTAIAYTSGKPHIGNTYEIVLADSIARYKREQGYDVRFQTGTDEHGQKIELKAAEAGV 69 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K FVDQ + + + D+++ SYD FIRTT+ H + + ++KK+ D+GDIYKG Y G Sbjct: 70 TPKEFVDQVAGEIKTIWDLMNTSYDKFIRTTDADHEEQVQKIFKKLYDQGDIYKGYYEGM 129 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + PVQ +EE YFFR+S Y +L+ Y HPEFI Sbjct: 130 YCTPCESFFTESQL---VDGKCPDCGR-PVQPAKEEAYFFRMSKYAQRLIDYINEHPEFI 185 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P+ R+NE+++ F+ GL+DL +SR +F WGI + DP+++ YVW+DALTNY+T GY Sbjct: 186 QPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVSFDPKHVTYVWLDALTNYITGLGY-- 243 Query: 247 NPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 N G K+WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L K Sbjct: 244 NCGGENGELFDKYWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQGDGK 303 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+ +++ GVDA+RYF++ E+ DG + + +R+N+DLAN +GNLV Sbjct: 304 MSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVITWELMVERMNSDLANILGNLV 363 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 +R++SM K + G++ G + D + +V +++ E M + A+ ++ + Sbjct: 364 NRTISMTNKYFGGVVEKTGVTEDVDADLKAVVLEAVKKADEKMDRLRVADAITEIFGIFR 423 Query: 423 EVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++Y D PW L K +A S VLY E I A LL +F+P+ + KI L Sbjct: 424 RSNKYIDETTPWALAKDEEKKARLSEVLYNLTEAITIGASLLASFMPETSEKILSQL--N 481 Query: 481 DENRCFQSLDQ 491 + R +S+++ Sbjct: 482 TQKRSLESMNE 492 >gi|229825724|ref|ZP_04451793.1| hypothetical protein GCWU000182_01087 [Abiotrophia defectiva ATCC 49176] gi|229790287|gb|EEP26401.1| hypothetical protein GCWU000182_01087 [Abiotrophia defectiva ATCC 49176] Length = 686 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 209/480 (43%), Positives = 304/480 (63%), Gaps = 13/480 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+TAI Y + +PHIG+ YE+I+AD +ARF R +G DV F TGTDEHGQKI Sbjct: 1 MSEKKPYYITTAITYTSGKPHIGNTYEIILADAIARFKRKEGYDVRFQTGTDEHGQKIET 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A AG T K FVD +R + + D+ + SYD FIRTT++ H + ++KK+ DKGDIY Sbjct: 61 RAIEAGQTPKEFVDSVAREVKRLWDLCNTSYDRFIRTTDEDHEKQVQKIFKKLYDKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y EA+Y + ++ ADG+ H V EEE YFF++S Y D+L+ + Sbjct: 121 KGAYKGMYCTECEAFYTNSQL---ADGKCPEC-HGEVHPAEEEAYFFKMSKYADRLIEHI 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 ++P+FI P+ R+NE+++ F+ GL+DL +SR +F WGI + D ++++YVW+DAL+NY+ Sbjct: 177 NNNPDFIRPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDSKHVVYVWLDALSNYI 236 Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 T GY + DG+ K+WPADLH+IGKDI+RFH IYWP FL++ ++PLPK+VF H + Sbjct: 237 TGLGY--DADGNYGDLYKKYWPADLHLIGKDIIRFHTIYWPIFLMALDVPLPKQVFGHPW 294 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L GEK+SKS GNVI ++ GVDA+RYF++ E+ DG + + +R N+DLA Sbjct: 295 LLQGGEKMSKSKGNVIYADDMASLFGVDAVRYFVLHEMPYENDGVITWELMAERYNSDLA 354 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N +GNLVSR+V+M K + G+I + G D + + L +I M+ A+ Sbjct: 355 NTLGNLVSRTVAMSNKYFGGVIESTGVEEPVDNELKEIAIGCLSKIINKMKELRAADAIT 414 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ +L ++Y D +PW L K R VLY E I A LL +F+P+ + KI Sbjct: 415 EIFTLFKRCNKYIDETEPWLLAKEEDKFPRLKEVLYNLSESIMIGASLLHSFMPETSEKI 474 >gi|33303705|gb|AAP22260.1| methionyl-tRNA synthetase [Bacillus cereus] Length = 411 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 190/411 (46%), Positives = 285/411 (69%), Gaps = 10/411 (2%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K A+ +T + +VD Sbjct: 1 HIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNITPQAYVDNIVAGI 60 Query: 81 RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND-- 138 +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Y GWYS++DE +Y + Sbjct: 61 KELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQ 120 Query: 139 --DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193 D + +G G+ ++ H+ V+ + EE YFFR+ Y D+LL +YE +P FI P R+ Sbjct: 121 LVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVDRLLKFYEDNPHFIQPESRK 179 Query: 194 NEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252 NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+DAL+NY+T GY + Sbjct: 180 NEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTANEEKY 239 Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312 KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+HG+IL K K+SKS GNV+D Sbjct: 240 KKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVD 299 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 P+ +I+ G+DALRY+L+RE+ G DG + +G +R+N DLAN +GNL++R+V+MI K Sbjct: 300 PVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKY 359 Query: 373 YDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 ++G IP TE DE++++ L+++ E M+N AL + LVS Sbjct: 360 FNGEIPAFKENVTEFDETLVAFAQDTLKKVEEAMENMEFSVALGSIWQLVS 410 >gi|282601236|ref|ZP_05981162.2| methionine--tRNA ligase [Subdoligranulum variabile DSM 15176] gi|282569800|gb|EFB75335.1| methionine--tRNA ligase [Subdoligranulum variabile DSM 15176] Length = 676 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 220/518 (42%), Positives = 310/518 (59%), Gaps = 18/518 (3%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E++K YI+T I YP+ + HIGH Y + D +AR+ RL G +V+F TGTDEHGQKI A Sbjct: 8 EQKKFYITTPIYYPSDKLHIGHTYCTVATDAMARYKRLQGYNVMFLTGTDEHGQKIELKA 67 Query: 63 QNAGVTTKVFVD---QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 + AGVT + FVD + + +D+ +++ISYD FIRTT+ H + ++KK+ DKGDI Sbjct: 68 KEAGVTPQQFVDNIVEGPKGVKDLWKLMNISYDRFIRTTDDYHVGAIQKIFKKMYDKGDI 127 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 YKG Y G Y E+++ + ++ G PV EEE YFFRLS Y D++ Sbjct: 128 YKGTYKGKYCTPCESFWTESQLVNGCCPDC----GRPVVDAEEEAYFFRLSKYADRVRDL 183 Query: 180 YESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 + +F+LP R NE++ +F+ GL DL +SR +F WGI + DP++++YVWIDAL NY Sbjct: 184 L-VNTDFLLPRSRVNEMVHNFIDPGLDDLCVSRTSFKWGIPVDFDPKHVVYVWIDALFNY 242 Query: 239 LTTTGYLDN--PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 T G++++ PD FWPAD+H IGK+I+RFH+I WPA L+S +PLPK V+ HG++ Sbjct: 243 TTALGFMNDKYPDSDYETFWPADVHFIGKEIVRFHSIIWPAMLMSMEMPLPKHVYGHGWL 302 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L G K+SKS GNV+DP + E DALRYFL+R+ G DG + + L R+N DLAN Sbjct: 303 LLDGGKMSKSKGNVVDPYLLAERYSADALRYFLLRDFPFGSDGNFSNELLINRINMDLAN 362 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNL+SR+ +M K + G +P A D+++L + +M+ ALA Sbjct: 363 DLGNLLSRTTAMADKYFGGTLPENQAAGPEDDALLEKAKGLRARYEADMEAYAFQNALAD 422 Query: 417 VISLVSEVDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 V ++ ++Y DA PW L K T P R + VLY E +R +LLQ F+P KI Sbjct: 423 VFDVIDAANKYIDATAPWVLAKNEETKP-RLARVLYNLAETLRICTVLLQPFMPDTCVKI 481 Query: 474 FDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPR 509 F L VADE + + S L LHK + IFPR Sbjct: 482 FGQLNVADEGKTWDSAAAFGTLPVTATLHKG-ENIFPR 518 >gi|283797633|ref|ZP_06346786.1| methionine--tRNA ligase [Clostridium sp. M62/1] gi|291074744|gb|EFE12108.1| methionine--tRNA ligase [Clostridium sp. M62/1] Length = 661 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 207/491 (42%), Positives = 309/491 (62%), Gaps = 15/491 (3%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI A AGV Sbjct: 10 YITTAIAYTSGKPHIGNTYEIVLADSIARYKREQGYDVRFQTGTDEHGQKIELKAAEAGV 69 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K FVDQ + + + D+++ SYD FIRTT+ H + + ++KK+ D+GDIYKG Y G Sbjct: 70 TPKEFVDQVAGEIKTIWDLMNTSYDKFIRTTDADHEEQVQKIFKKLYDQGDIYKGYYEGM 129 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + PVQ +EE YFFR+S Y +L+ Y HPEFI Sbjct: 130 YCTPCESFFTESQL---VDGKCPDCGR-PVQPAKEEAYFFRMSKYAQRLIDYINEHPEFI 185 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P+ R+NE+++ F+ GL+DL +SR +F WGI + DP+++ YVW+DALTNY+T GY Sbjct: 186 QPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVSFDPKHVTYVWLDALTNYITGLGY-- 243 Query: 247 NPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 N G K+WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L K Sbjct: 244 NCGGENGELFDKYWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQGDGK 303 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+ +++ GVDA+RYF++ E+ DG + + +R+N+DLAN +GNLV Sbjct: 304 MSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVITWELMVERMNSDLANILGNLV 363 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 +R++SM K + G++ G + D + +V +++ E M + A+ ++ + Sbjct: 364 NRTISMTNKYFGGVVEKTGVTEDVDADLKAVVLEAVKKADEKMDRLRVADAITEIFGIFR 423 Query: 423 EVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++Y D PW L K +A S VLY E I A LL +F+P+ + KI L Sbjct: 424 RSNKYIDETTPWALAKDEEKKARLSEVLYNLTEAITIGASLLASFMPETSEKILSQL--N 481 Query: 481 DENRCFQSLDQ 491 + R +S+++ Sbjct: 482 TQKRSLESMNE 492 >gi|295398235|ref|ZP_06808281.1| methionine--tRNA ligase [Aerococcus viridans ATCC 11563] gi|294973585|gb|EFG49366.1| methionine--tRNA ligase [Aerococcus viridans ATCC 11563] Length = 672 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 201/521 (38%), Positives = 328/521 (62%), Gaps = 12/521 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + +E YI+T I YP+ + HIG+ Y + +D LAR+ R + DV+F TG DEHGQKI + Sbjct: 3 ENKETFYITTPIYYPSGKLHIGNTYTTVASDTLARYKRANDFDVMFLTGADEHGQKIQQK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD + +++ + IS D F+RT+ ++H + + ++ ++ ++GDIY Sbjct: 63 AEEQGISPQEYVDGMAAGMQELWKTMKISNDIFMRTSSQQHIEAIQYIFDRLLEQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE ++ + +EVYK +G+ + + V+ ++EE YFF++S Y D+ Sbjct: 123 GEYEGWYSVSDEEFFTETQLEEVYKDENGKVIGGKAPSGHDVELVKEESYFFKMSKYADR 182 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 LL YYE +P FI P R+NE+I+ F+K GL+DL++SR +F+WG+ + +P++++YVWIDA Sbjct: 183 LLQYYEENPTFIQPETRKNEMINNFIKPGLEDLAVSRTSFNWGVPVKSNPKHVVYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L NY+T GY + + K+WPA++H +GK+I+RFH IYWP L++ +LPLPK++F HG Sbjct: 243 LANYITALGYPNADAENFDKYWPANIHFVGKEIVRFHTIYWPIMLMALDLPLPKQIFGHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 ++L + K+SKS GNV+ P ++E G+DALRY+L+RE+ G DG + D R+N DL Sbjct: 303 WLLMQDGKMSKSKGNVVYPEMLVERYGLDALRYYLMREVKFGHDGIFTPDNFINRINYDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+VSM+ K G + PG T+ D + + + + R++M A Sbjct: 363 ANDLGNLLNRTVSMVNKYLGGQVGAYPGQITDFDAPLEDLITTEVAAYRQSMDALQFSVA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLAN 471 L V ++S ++Y D PW L K + + +V+Y V+ +R +AIL+Q + + Sbjct: 423 LDHVWEIISRTNKYIDETAPWILAKDEAEAGKLQSVMYHLVDSLRVIAILIQPVMVETPA 482 Query: 472 KIFDILFVA-DENRCFQSLDQRLKPGFM-LHKTFDPIFPRF 510 KIF+ L + D + F++ L P + + PIFPR Sbjct: 483 KIFEQLGLDFDADAGFENAKVGLYPETAKVVEKGQPIFPRL 523 >gi|71746704|ref|XP_822407.1| methionyl-tRNA synthetase [Trypanosoma brucei TREU927] gi|70832075|gb|EAN77579.1| methionyl-tRNA synthetase, putative [Trypanosoma brucei] Length = 773 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 213/500 (42%), Positives = 301/500 (60%), Gaps = 28/500 (5%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++++ I Y NA PHIGH Y +I DV+ R+HR+ G V TGTDEHGQK+A+AA+ Sbjct: 242 FFVTSPIYYVNAAPHIGHVYSTLITDVIGRYHRVKGERVFALTGTDEHGQKVAEAAKQKQ 301 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 V+ F + F+ + +D S D FIRTT ++H + LW K+ KGDIY G Y G Sbjct: 302 VSPYDFTAAVAGEFKKCFEQMDYSIDYFIRTTNEQHKAVVKELWTKLEQKGDIYLGRYEG 361 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNP----------VQWMEEEGYFFRLSAYQDKL 176 WYS+ DE++ + G D NP V W+ EE Y FRLSA++++L Sbjct: 362 WYSISDESFLTPQNITDGVD-----KDGNPCKVSLESGHVVTWVSEENYMFRLSAFRERL 416 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIKIPDDPQYIMYVWID 233 L +Y ++P I+P RR EVI V+ GL DLS+SRK +W I +P +P + +YVW+D Sbjct: 417 LEWYHANPGCIVPEFRRREVIRAVEKGLPDLSVSRKKETLHNWAIPVPGNPDHCVYVWLD 476 Query: 234 ALTNYLTTTGYLDNPDG---------SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ALTNYLT + + G S+ + +PAD+HVIGKDIL+FHAIYWPAFLLSA L Sbjct: 477 ALTNYLTGSRLRVDESGKEVSLADDFSELERFPADVHVIGKDILKFHAIYWPAFLLSAGL 536 Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 PLPKK+ +HG+ +KISKSLGNV DP+E EE G DAL+YFL+RE DG Y Sbjct: 537 PLPKKIVAHGWWTKDRKKISKSLGNVFDPVEKAEEFGYDALKYFLLRESGFSDDGDYSDK 596 Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404 + R+N +LA+ +GNLV R S + + +G P+P A+TE DES++ + + Sbjct: 597 NMIARLNGELADTLGNLVMRCTSAKI-NVNGEWPSPAAYTEEDESLIQLIKDLPGTADHY 655 Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 I +A+ V ++ ++ Y PW+L KT+P+R TVLY+T+E +R +LL Sbjct: 656 YLIPDIQKAIIAVFDVLRAINAYVTDMAPWKLVKTDPERLRTVLYITLEGVRVTTLLLSP 715 Query: 465 FVPKLANKIFDILFVADENR 484 +P+ + IFD+L V + +R Sbjct: 716 ILPRKSVVIFDMLGVPEVHR 735 >gi|256027687|ref|ZP_05441521.1| methionyl-tRNA synthetase [Fusobacterium sp. D11] gi|289765647|ref|ZP_06525025.1| methionyl-tRNA synthetase [Fusobacterium sp. D11] gi|289717202|gb|EFD81214.1| methionyl-tRNA synthetase [Fusobacterium sp. D11] Length = 639 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 216/518 (41%), Positives = 321/518 (61%), Gaps = 14/518 (2%) Query: 1 MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 MK+ EK ++ST I Y N PH+G AY I ADV+ R+++ G+D F TG DEHGQK+ Sbjct: 1 MKKNEKEFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTYFMTGLDEHGQKVE 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 +AA+ G T + + D+ + NF++M LDI YDDFIRTTE RH R + ++ KGDI Sbjct: 61 QAAEQNGYTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVRRILDMVNAKGDI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 YKG Y G Y + E ++ ++++ G++ + ++ ++EE YFF++S Y D LL + Sbjct: 121 YKGEYEGKYCISCETFFPENQL-NGSNKCPDCGKE--LRVLKEESYFFKMSKYADALLKH 177 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 E HP+FILP RRNEVISF+K GL+DLS+SR TF WGI I P +I YVW DALTNY+ Sbjct: 178 IEEHPDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYI 237 Query: 240 TTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 T+ G+ +N + KFW +H+IGKDI+RFHAI WP LLSA + LP + +HG+ Sbjct: 238 TSAGF-ENDEKKFDKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWT 296 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 +GEK+SKS GNV++P + I++ GVDA RY+L+RE G DG Y G+ R+N+DLAN Sbjct: 297 SEGEKMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLAND 356 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 +GNL++R++ M K ++G++ D+ I S+ + V++++ + M RAL + Sbjct: 357 LGNLLNRTLGMYKKYFNGVVVASSTAEPIDDEIKSMFNDVIKDVEKYMYLFEFSRALETI 416 Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 +S +++Y D PW L K T R +TV+ + E + ++A L+ ++P+ A KI + Sbjct: 417 WKFISRLNKYIDETMPWSLAKDETKKARLATVMNILCEGLYKIAFLIAPYMPESAQKISN 476 Query: 476 ILFVADENRCFQSLDQR----LKPGFMLHKTFDPIFPR 509 L + + + D + K G L + PIFPR Sbjct: 477 QLGINKDITNVKFDDIKGWDIFKAGHKLGEA-SPIFPR 513 >gi|323483574|ref|ZP_08088959.1| hypothetical protein HMPREF9474_00708 [Clostridium symbiosum WAL-14163] gi|323403130|gb|EGA95443.1| hypothetical protein HMPREF9474_00708 [Clostridium symbiosum WAL-14163] Length = 657 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 205/478 (42%), Positives = 304/478 (63%), Gaps = 13/478 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI A+ Sbjct: 6 KKPYYITTAIAYTSGKPHIGNTYEIVLADSIARYKREQGFDVRFQTGTDEHGQKIELKAE 65 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AGVT + FVD + + + D+++ SYD FIRTT+K H + + ++KK+ DKGDIYKG Sbjct: 66 EAGVTPQEFVDGVAAQIKSIWDLMNTSYDKFIRTTDKEHEEQVQKIFKKLYDKGDIYKGH 125 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ +V DG+ + PV +EE YFF++S Y +L+ + H Sbjct: 126 YEGLYCTPCESFWTSSQV---TDGKCPDCGR-PVVPAKEEAYFFKMSKYAQQLIDHINEH 181 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP+++ YVW+DALTNY+T Sbjct: 182 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVSFDPKHVTYVWLDALTNYITGL 241 Query: 243 GYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 GY + DG+ K+WPADLH+IGKDI+RFH IYWP FL++ LPLPK+VF H ++L Sbjct: 242 GY--DCDGNHGELFGKYWPADLHLIGKDIIRFHTIYWPIFLMALELPLPKQVFGHPWLLQ 299 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K+SKS GNV+ +++ GVDA+RYF++ E+ DG + + +R+N+DLAN + Sbjct: 300 GDGKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANIL 359 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNLV+R++SM K + G + GA E+D + + ++ + E M + A+ ++ Sbjct: 360 GNLVNRTISMSNKYFGGEVADKGAAGEADADLKATVLEAVKRVDEKMDKLRVADAITEIF 419 Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + ++Y D PW L K DR +TVLY E I A LL +F+P+ A KI Sbjct: 420 GIFRRSNKYIDETMPWTLAKDEAQKDRLATVLYNLTEAITIGASLLYSFMPETAEKIL 477 >gi|309803659|ref|ZP_07697749.1| methionine--tRNA ligase [Lactobacillus iners LactinV 11V1-d] gi|308164257|gb|EFO66514.1| methionine--tRNA ligase [Lactobacillus iners LactinV 11V1-d] Length = 675 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 206/519 (39%), Positives = 319/519 (61%), Gaps = 12/519 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E++ YI+T I YP+ + IG+AY + AD +AR+ R +G D F TGTDEHG KI + A Sbjct: 19 EKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQKA 78 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + G+ + FVD + +++ + +LDISYD FIRTT++ H + +++++ +GDIY G Sbjct: 79 EAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIYLG 138 Query: 123 CYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDKL 176 Y GWYS+ DE Y+ + EVYK G+ + + V+ ++E YFFR+S Y D+L Sbjct: 139 EYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYADRL 198 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 L YY+ +P+FILP R E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWIDAL Sbjct: 199 LEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDAL 258 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 +NY++ GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK++F HG+ Sbjct: 259 SNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGHGW 318 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L K K+SKS GN + P ++ G+DALRY+L+R I G DG + + +RVN DLA Sbjct: 319 VLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFDLA 378 Query: 356 NGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R++SMI + DG++ P E + + + + + E M +AL Sbjct: 379 NDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQMDALHFSKAL 438 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + L+S ++Y D PW L K D V+ E +R +A+L++ + + I Sbjct: 439 DTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMTQSPVHI 498 Query: 474 FDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510 F+ L ++ ++ SL G+ + K PIFPR Sbjct: 499 FEQLGLSLDDANAASLCWGAY-GWQNYVTKNPKPIFPRL 536 >gi|167760642|ref|ZP_02432769.1| hypothetical protein CLOSCI_03024 [Clostridium scindens ATCC 35704] gi|167661767|gb|EDS05897.1| hypothetical protein CLOSCI_03024 [Clostridium scindens ATCC 35704] Length = 637 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 205/483 (42%), Positives = 309/483 (63%), Gaps = 16/483 (3%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI A Sbjct: 2 DKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + AGVT K FVD + + + D+++ SYD FIRTT+ H + ++KK+ D+GDIYKG Sbjct: 62 EEAGVTPKEFVDGVAGQIQTIWDLMNTSYDKFIRTTDADHEKQVQKIFKKLYDQGDIYKG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y E+++ + ++ DG+ + VQ +EE YFF++S Y D+L+ + S Sbjct: 122 YYEGMYCTPCESFFTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADRLIEHINS 177 Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEFI P+ R+NE++ +F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+T Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPEHVVYVWLDALTNYITG 237 Query: 242 TGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 GY D S +F WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H ++L Sbjct: 238 IGY-DCGGESTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLLQ 296 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K+SKS GNV+ E+++ GVDA+RYF++ E+ DG + + +R+N+DLAN + Sbjct: 297 GDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTL 356 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE-----IRENMQNQLIHRA 413 GNLV+R++SM K +DG++ + D + R + E + M + A Sbjct: 357 GNLVNRTISMTNKYFDGVVTDKKVADDEDAKAVDADLRAVTENTPKAVEAKMDELRVADA 416 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 + ++ +L ++Y D PW L K DR TVLY +E I+ A+LL++F+P + Sbjct: 417 ITEIFNLFKRCNKYIDETMPWALAKDEDKKDRLETVLYNLLESIKAGAVLLESFMPDTSA 476 Query: 472 KIF 474 KI Sbjct: 477 KIL 479 >gi|169824241|ref|YP_001691852.1| methionyl-tRNA synthetase [Finegoldia magna ATCC 29328] gi|167831046|dbj|BAG07962.1| methionyl-tRNA synthetase [Finegoldia magna ATCC 29328] Length = 666 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 202/475 (42%), Positives = 311/475 (65%), Gaps = 8/475 (1%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E++ YI+T I YP++ H+GH Y IIAD L +F ++ G DV TTGTDEHGQK+ + Sbjct: 3 EEKKSYYITTPIYYPSSNLHLGHTYTTIIADTLKKFKKIQGYDVFLTTGTDEHGQKLYEK 62 Query: 62 AQ--NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ N G ++D ++ +D+ LDI D F+R+T+K H + +++K+ DKGDI Sbjct: 63 AKEKNMGDNPLNYIDPIVQSAKDLWKKLDIDIDSFVRSTDKVHEKNVQEIFQKLYDKGDI 122 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 YK Y G Y + EA++ + ++ DG+ + + V + EEE YFFRLS Y+D++L Sbjct: 123 YKSTYKGHYCVDCEAFWTESQL---KDGKCPDCGRD-VHYHEEESYFFRLSKYKDRILQL 178 Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 Y+ +P+F+ P R+NE+++ F+ L+DLS+SR +FDWG+K+P D ++I+YVWIDAL+ Y Sbjct: 179 YKDNPDFLKPESRKNEMVNNFLSGELEDLSVSRTSFDWGVKVPFDDKHIIYVWIDALSCY 238 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 LT GY + + KFWP D+H++GK+I+RFH I WPA L++ +LPLPK+VF+HG+IL Sbjct: 239 LTGIGYGQDEELFN-KFWPCDIHLVGKEIVRFHTIIWPALLMALDLPLPKRVFAHGWILF 297 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 +K+SKS GNV P +I+ GVDAL+Y+++R+ G DG + + R N+DL N + Sbjct: 298 NEDKMSKSKGNVYYPEPIIDLYGVDALKYYILRDFTFGNDGNFTTERFMNRFNSDLVNDL 357 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNLVSRSVSM+ K +DG+IP P + D+S++SV +++ E ++ AL ++ Sbjct: 358 GNLVSRSVSMVEKYFDGVIPQPNDNNDIDKSLISVVEGCQEKVEELLEELDFSNALEEIW 417 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +V ++Y D PW L K +P+R TVLY ++ IR + IL F+ + +NKI Sbjct: 418 KVVRRANKYIDETTPWILIKEDPERLKTVLYNLMDAIRVICILTSPFITETSNKI 472 >gi|261332101|emb|CBH15094.1| methionyl-tRNA synthetase, putative [Trypanosoma brucei gambiense DAL972] Length = 773 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 212/500 (42%), Positives = 299/500 (59%), Gaps = 28/500 (5%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++++ I Y NA PHIGH Y +I DV+ R+HR+ G V TGTDEHGQK+A+AA+ Sbjct: 242 FFVTSPIYYVNAAPHIGHVYSTLITDVIGRYHRVKGERVFALTGTDEHGQKVAEAAKQKQ 301 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 V+ F + F+ + +D S D FIRTT ++H + LW K+ KGDIY G Y G Sbjct: 302 VSPYDFTAAVAGEFKKCFEQMDYSIDYFIRTTNEQHKAVVKELWTKLEQKGDIYLGRYEG 361 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNP----------VQWMEEEGYFFRLSAYQDKL 176 WYS+ DE++ + G D NP V W+ EE Y FRLSA++++L Sbjct: 362 WYSISDESFLTPQNITDGVD-----KDGNPCKVSLESGHVVTWVSEENYMFRLSAFRERL 416 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIKIPDDPQYIMYVWID 233 L +Y ++P I+P RR EVI V+ GL DLS+SRK +W I +P +P + +YVW+D Sbjct: 417 LEWYHANPGCIVPEFRRREVIRAVEKGLPDLSVSRKKETLHNWAIPVPGNPDHCVYVWLD 476 Query: 234 ALTNYLTTTGYLDNPDGSKAKF---------WPADLHVIGKDILRFHAIYWPAFLLSANL 284 ALTNYLT + + G + +PAD+HVIGKDIL+FHAIYWPAFLLSA L Sbjct: 477 ALTNYLTGSRLRVDESGKEVSLVDDFNELERFPADVHVIGKDILKFHAIYWPAFLLSAGL 536 Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 PLPKK+ +HG+ +KISKSLGNV DP+E EE G DAL+YFL+RE DG Y Sbjct: 537 PLPKKIVAHGWWTKDRKKISKSLGNVFDPVEKAEEFGYDALKYFLLRESGFSDDGDYSDK 596 Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404 + R+N +LA+ +GNLV R S + + +G P+P A+TE DES++ + + Sbjct: 597 NMIARLNGELADTLGNLVMRCTSAKI-NVNGEWPSPAAYTEEDESLIQLIKDLPGTADHY 655 Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 I +A+ V ++ ++ Y PW+L KT+P+R TVLY+T+E +R +LL Sbjct: 656 YLIPDIQKAIIAVFDVLRAINAYVTDMAPWKLVKTDPERLRTVLYITLEGVRVTTLLLSP 715 Query: 465 FVPKLANKIFDILFVADENR 484 +P+ + IFD+L V + +R Sbjct: 716 ILPRKSVVIFDMLGVPEVHR 735 >gi|18311506|ref|NP_563440.1| methionyl-tRNA synthetase [Clostridium perfringens str. 13] gi|25009370|sp|Q8XHG1|SYM_CLOPE RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|18146190|dbj|BAB82230.1| methionine-tRNA ligase [Clostridium perfringens str. 13] Length = 645 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 196/473 (41%), Positives = 300/473 (63%), Gaps = 7/473 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ HIG+ Y + AD +ARF RL G +V+F TGTDEHGQKI + A Sbjct: 3 KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K VD+ +D+ +++ISYD FIRTT+ H + ++KK+ D+GDIYK Sbjct: 63 EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ G PV+ +EE YFF++S Y D+L+ Y E H Sbjct: 123 YEGLYCTPCESFWTETQLVNGNCPDC----GRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI P R+NE+++ F++ GL+DL +SR +F WGI + D ++++YVWIDAL+NY+T Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY KFWPAD+H+IGKDILRFH IYWP L++ L LPK+VF HG++L G K Sbjct: 239 GYGQENQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ ++ G DA+RY+L+REI G DG ++ + K+VN DLAN +GNL+ Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+++M+ K + G+I P D+ ++++ ++ ++ I AL + +L+S Sbjct: 359 SRTIAMVYKYFGGVIQAPTCKEPIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++Y D PW L K +R TVLY +E +R +++++ F+ + + KI Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKI 471 >gi|289547973|ref|YP_003472961.1| methionyl-tRNA synthetase [Thermocrinis albus DSM 14484] gi|289181590|gb|ADC88834.1| methionyl-tRNA synthetase [Thermocrinis albus DSM 14484] Length = 489 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 208/510 (40%), Positives = 307/510 (60%), Gaps = 29/510 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K Y++T I Y N PHIGHAY + AD LARF+R+ G +V F TGTDEHG KI K A+ Sbjct: 2 KFYVTTPIYYVNDVPHIGHAYTTVAADTLARFYRMRGYEVFFLTGTDEHGLKIQKTAEEK 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV K DQN+ NF ++ ++ISYD FIRTT+ H + R +++K ++GDIY G Y Sbjct: 62 GVHPKDLADQNASNFMELWRFMNISYDRFIRTTDPDHQEVVREMFQKSWERGDIYLGEYE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY + E + ++ E+ +G+ P +++ E YFFRLS YQ+ LL YE P+ Sbjct: 122 GWYCVGCEEFKSESEL---LEGKLCPLHLKPCEYVREPSYFFRLSKYQEALLKLYEEMPD 178 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 F+ P R EV+SFV GL+DLS++R WGI++P D ++ +YVW DAL NY++ Sbjct: 179 FVRPEHRLREVVSFVSMGLRDLSVTRPASRVRWGIRVPFDEEHTIYVWFDALFNYVSAVR 238 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 + WPADLH++GKDILRFHA+YWPAFL+S L +P+ VF+HG+ +G+K+ Sbjct: 239 -------ERMHLWPADLHLVGKDILRFHAVYWPAFLMSVGLDIPRTVFAHGWWKVEGQKM 291 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNV+ P+++++E G+D +RYFL+R++ G DG +D + KR+N +LAN IGNLVS Sbjct: 292 SKSLGNVVSPVDLVKEYGLDPVRYFLLRDMPFGDDGDLRRDNILKRINGELANEIGNLVS 351 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R +SM+LK G A D VC ++ E M + AL +V+ S Sbjct: 352 RVLSMVLKYTQG-----KATGGKDAQYEKVCGETIKRYEELMGRVDFYNALEEVLKFSSY 406 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +++Y D++ PW++ K VLY V+ + LL FVP+ K+ + + Sbjct: 407 LNKYVDSKAPWQMAKVGDPSLDDVLYTLVDGCFVVGYLLYPFVPQSMEKLMQAIGI---- 462 Query: 484 RCFQSLDQRLKP----GFMLHKTFDPIFPR 509 + L Q+++P G+ + + + +FPR Sbjct: 463 ---EKLPQQIRPYSFAGYTVREKVN-LFPR 488 >gi|282896532|ref|ZP_06304552.1| Methionyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9] gi|281198638|gb|EFA73519.1| Methionyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9] Length = 533 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 202/484 (41%), Positives = 302/484 (62%), Gaps = 13/484 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K + ++T + Y N PHIG AY I AD +ARF RL G +V+F TGTDEHGQKI ++ Sbjct: 6 KTSKTFALTTPLYYVNDVPHIGSAYTTIAADTMARFQRLLGNEVIFITGTDEHGQKIQRS 65 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 AQ+ G + + F DQ +F D+ +L+I YD F RTT+ +H + + ++ ++GDIY+ Sbjct: 66 AQSQGKSPQEFCDQIVPSFIDLWQILNIQYDRFSRTTDLKHQAIVKEFFNRVWEQGDIYR 125 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 G GWY + E + + E+ +G + + V+W +E+ YFFRLS YQ L +Y+ Sbjct: 126 GEQKGWYCVSCEEFKEERELIEGKRCPIHTTKE--VEWRDEQNYFFRLSKYQKPLEEFYQ 183 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT- 240 SHP FI P RRNEV+SFV GL+D S+SR DWG +P D ++ +YVW DAL Y+T Sbjct: 184 SHPNFIQPASRRNEVLSFVSQGLQDFSISRVNLDWGFPVPVDTEHTLYVWFDALLGYITA 243 Query: 241 -----TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 T L+N + +K+WP +LH+IGKDILRFHA+YWPA L+SANLPLP++VF HGF Sbjct: 244 LLEPGTEATLEN---AVSKWWPINLHLIGKDILRFHAVYWPAMLISANLPLPQQVFGHGF 300 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + G+K+ K+LGN +DP+ ++++ G DA+RY+ ++EI GKDG +++ +NADLA Sbjct: 301 LTKDGQKMGKTLGNTVDPVALVKKYGSDAVRYYFLKEIEFGKDGDFNEIRFIHVLNADLA 360 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N +GNL++R+++M+ K G IP+ E+ L L E + + L +A Sbjct: 361 NDLGNLLNRTLNMVKKYCAGEIPSIAPQDIPPENTLKTIGGQLGEKVKQAYSVLAFNEVA 420 Query: 416 Q-VISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 Q V+ LV +++ D Q PW L K+ ++ +TVLY +E +R A LL +P +++ I Sbjct: 421 QAVMLLVQTSNKFIDEQAPWSLYKQGKQNQVATVLYTVLESVRLAAYLLSPIIPNISSDI 480 Query: 474 FDIL 477 + L Sbjct: 481 YQQL 484 >gi|315654035|ref|ZP_07906951.1| methionine--tRNA ligase [Lactobacillus iners ATCC 55195] gi|315488731|gb|EFU78377.1| methionine--tRNA ligase [Lactobacillus iners ATCC 55195] Length = 659 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 207/521 (39%), Positives = 319/521 (61%), Gaps = 12/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + IG+AY + AD +AR+ R +G D F TGTDEHG KI + Sbjct: 1 MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD + +++ + +LDISYD FIRTT++ H + +++++ +GDIY Sbjct: 61 KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE Y+ + EVYK G+ + + V+ ++E YFFR+S Y D Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YY+ +P+FILP R E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY++ GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK++F H Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P ++ G+DALRY+L+R I G DG + + +RVN D Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R++SMI + DG + P E + + + + + E M + Sbjct: 361 LANDLGNLLNRTISMINQYQDGWVDPVSTTEDEYGKQLKELANHTINLYHEQMDALHFSK 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL + L+S ++Y D PW L K D V+ E +R +A+L++ + + Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAEGLRLIALLIRPIMTQSPV 480 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510 IF+ L ++ ++ SL G+ + K PIFPR Sbjct: 481 HIFEQLGLSLDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520 >gi|168213448|ref|ZP_02639073.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|170715012|gb|EDT27194.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] Length = 645 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 196/473 (41%), Positives = 300/473 (63%), Gaps = 7/473 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ HIG+ Y + AD +ARF RL G +V+F TGTDEHGQKI + A Sbjct: 3 KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K VD+ +D+ +++ISYD FIRTT+ H + ++KK+ D+GDIYK Sbjct: 63 EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ G PV+ +EE YFF++S Y D+L+ Y E H Sbjct: 123 YEGLYCTPCESFWTETQLVNGNCPDC----GRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI P R+NE+++ F++ GL+DL +SR +F WGI + D ++++YVWIDAL+NY+T Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY KFWPAD+H+IGKDILRFH IYWP L++ L LPK+VF HG++L G K Sbjct: 239 GYGQENQELYNKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP+ ++ G DA+RY+L+REI G DG ++ + K+VN DLAN +GNL+ Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+++M+ K + G+I P D+ ++++ ++ ++ I AL + +L+S Sbjct: 359 SRTIAMVYKYFGGVIQAPTCKEPIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++Y D PW L K +R TVLY +E +R +++++ F+ + + KI Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKI 471 >gi|224541065|ref|ZP_03681604.1| hypothetical protein CATMIT_00216 [Catenibacterium mitsuokai DSM 15897] gi|224525989|gb|EEF95094.1| hypothetical protein CATMIT_00216 [Catenibacterium mitsuokai DSM 15897] Length = 642 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 208/487 (42%), Positives = 315/487 (64%), Gaps = 19/487 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 MK+ + Y++TAI Y + +PHIG+ YE++++D + R R G +V F TGTDEHGQKI Sbjct: 1 MKDPKDFYLTTAITYTSGKPHIGNTYEIVLSDAICRAKRQQGYNVRFQTGTDEHGQKIEL 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+ K +VD+ + + + D++D++YD FIRTT++ H + ++KK+ DKGDIY Sbjct: 61 KAKEAGIEPKEYVDKVAAEVKRIWDMMDVTYDKFIRTTDEYHVKQVQKIFKKLHDKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 G Y G Y E+++ + ++ G G+ ++A+ EE YFF+LS YQD+L Sbjct: 121 LGHYEGKYCTACESFFTESQLVDGKCPDCGGEVHDAK--------EEAYFFKLSKYQDRL 172 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 + YY HPEFI P R+NE+++ F+K GL+DL +SR +F W I + DP++++YVWIDAL Sbjct: 173 MQYYNDHPEFIQPESRKNEMVNNFLKPGLQDLCVSRTSFTWSIPVDFDPKHVVYVWIDAL 232 Query: 236 TNYLTTTGY-LD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 NY+T GY LD N D ++WPAD+HVIGKDI+RFH IYWP L++ +LPLPK+VF H Sbjct: 233 VNYITGLGYDLDGNNDELFNRYWPADVHVIGKDIVRFHTIYWPIILMALDLPLPKQVFGH 292 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 ++L K+SK LGNVI ++++ GVDA+RY+L+ EI DG D L +R+N+D Sbjct: 293 PWLLMGDSKMSKHLGNVIYADDLVDLFGVDAVRYYLLHEIPYDNDGSITWDLLVERINSD 352 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHR 412 LAN +GNLV+R+++M K +DG++ D+ + S+ + + E ++N+ + + Sbjct: 353 LANILGNLVNRTIAMCNKYFDGVVTNTNVCEPVDDELKSI-ALAMPEKTIKLENEFKLAK 411 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL ++ L+ ++Y D PW L K T DR +TVLY VE IR AI L+ F+P + Sbjct: 412 ALDEIYVLLRRTNKYIDDTMPWTLAKDETKKDRLATVLYNLVEAIRFSAIALEPFIPGTS 471 Query: 471 NKIFDIL 477 KI D++ Sbjct: 472 KKILDMI 478 >gi|262067595|ref|ZP_06027207.1| methionine--tRNA ligase [Fusobacterium periodonticum ATCC 33693] gi|291378710|gb|EFE86228.1| methionine--tRNA ligase [Fusobacterium periodonticum ATCC 33693] Length = 640 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 212/514 (41%), Positives = 316/514 (61%), Gaps = 13/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++ST I Y N PH+G AY I ADV+ R+++ G+D F TG DEHGQK+ +AA+ Sbjct: 5 KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFVTGLDEHGQKVEQAAE 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + + D+ + NF++M LDI YDDFIRTTE+RH + + + + KGDIYKG Sbjct: 65 QNGFTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEERHKKAVKKILEIVHAKGDIYKGE 124 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + E ++ ++++ G++ + V ++EE YFF++S Y D LL + + H Sbjct: 125 YKGKYCVSCETFFPENQL-NGSNKCPDCGKELTV--LKEESYFFKMSKYADALLKHIDEH 181 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FILP RRNEVISF+K GL+DLS+SR TF WGI I P +I YVW DALTNY+T+ G Sbjct: 182 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIEFAPGHITYVWFDALTNYITSAG 241 Query: 244 YLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 + +N D KFW +H+IGKDI+RFHAI WP LLSA + LP + +HG+ +GE Sbjct: 242 F-ENDDKKFDKFWNDARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP I++ GVDA RY+L+RE G DG Y G+ R+N+DLAN +GNL Sbjct: 301 KMSKSKGNVVDPYNEIKKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLANDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R++ M K ++G++ E D+ I ++ ++++ + M RAL + + Sbjct: 361 LNRTLGMYKKYFNGVVVASSTSEEIDDVIKTMFDETIKDVEKYMYLFEFSRALETIWKFI 420 Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S +++Y D PW L K T R +TV+ + E + ++A L+ ++P+ A KI + L + Sbjct: 421 SRLNKYIDETMPWALAKDETKKARLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 480 Query: 480 ADENRCFQSLDQR----LKPGFMLHKTFDPIFPR 509 + + D + K G L + PIFPR Sbjct: 481 DKDITSLKFDDIKEWNIFKEGHQLGEA-SPIFPR 513 >gi|323465759|gb|ADX69446.1| Methionyl-tRNA synthetase [Lactobacillus helveticus H10] Length = 658 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 208/524 (39%), Positives = 319/524 (60%), Gaps = 18/524 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + IG+AY I AD +AR+ R G D F TGTDEHG KI + Sbjct: 1 MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGYDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD+ + +++ + LDISYD FIRTT++ H + +++K+ KGDIY Sbjct: 61 KAEAQGIKPQEFVDKMAASYKKLWKSLDISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVYK +G + + V+ ++E YFF++S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YY+ HPEFILP R E+++ F+K GL+DLS++R T +WGI +P DP++++YVWID Sbjct: 181 RLVEYYKEHPEFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK + H Sbjct: 241 ALSNYITALGYGSDHDELFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P + G+D LRY+L+R + G DG + + +R+N D Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGIDPLRYYLMRALPFGADGIFTPEDFIERINYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+VSMI + DG P P A + + + + V+ + E M + + Sbjct: 361 LANDLGNLLNRTVSMINQYQDGQGAPVPVAQDKFGKDLQDTAASVIADYCEQMDSLHFSQ 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL + LV+ ++Y D PW L K+ D S V+ E +R +AI++ + + A Sbjct: 421 ALDSIWKLVARANKYIDETTPWVLNKEGKKDELSHVMSNLAESLRLIAIMIYPVMTETAP 480 Query: 472 KIFDILFVA-----DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 K+F+ L + +N F K + + PIFPR Sbjct: 481 KMFEQLGLNWDDEDQKNLAFNDFGWNTK----VVEKPKPIFPRL 520 >gi|166031337|ref|ZP_02234166.1| hypothetical protein DORFOR_01024 [Dorea formicigenerans ATCC 27755] gi|166028742|gb|EDR47499.1| hypothetical protein DORFOR_01024 [Dorea formicigenerans ATCC 27755] Length = 648 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 204/483 (42%), Positives = 309/483 (63%), Gaps = 18/483 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI A Sbjct: 7 KGKYYITTAIAYASGKPHIGNTYEVVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKAD 66 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T K FVD +R + + D+++ SYD FIRTT++ H + ++K++ D+GDIYK Sbjct: 67 EAGITPKQFVDNAAREIKKIWDLMNTSYDKFIRTTDEDHEAQVKKIFKRLYDQGDIYKSS 126 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ DG+ + + +EE YFFR+S Y D+L+ Y +H Sbjct: 127 YEGMYCTPCESFWTESQL---VDGKCPDCGRE-CKPAKEEAYFFRMSKYADRLIDYINTH 182 Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEFI P+ R+NE++ +F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+T Sbjct: 183 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKHVVYVWLDALTNYITGI 242 Query: 243 GYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 GY + DG+ K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L Sbjct: 243 GY--DCDGNSTEQFKKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQ 300 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K+SKS GNV+ E+++ GVDA+RYF++ E+ DG + + +R+N+DLAN + Sbjct: 301 GDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTL 360 Query: 359 GNLVSRSVSMILKDYDGMIPTPG-AFTESDESI----LSVCSRVLQEIRENMQNQLIHRA 413 GNLV+R++SM K + G + G A TE D+++ ++ + + M + A Sbjct: 361 GNLVNRTISMTNKYFGGTVTNKGVAETEEDKAVDADLKAITEDTPKRVEAKMDELRVADA 420 Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 + ++ L ++Y D PW L K DR TVLY +E I+ A LL++F+P+ + Sbjct: 421 ITEIFVLFKRCNKYIDETMPWALAKEEAKKDRLETVLYNLIESIKTGARLLESFMPETSE 480 Query: 472 KIF 474 KI Sbjct: 481 KIL 483 >gi|33303703|gb|AAP22259.1| methionyl-tRNA synthetase [Bacillus cereus] Length = 410 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 190/410 (46%), Positives = 285/410 (69%), Gaps = 10/410 (2%) Query: 22 IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81 IGHAY + D +AR+ R+ G +V + TGTDEHGQKI K A+ VT + +VD + Sbjct: 1 IGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNVTPQAYVDNIVAGIK 60 Query: 82 DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND--- 138 ++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Y GWYS++DE +Y + Sbjct: 61 ELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQL 120 Query: 139 -DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194 D + +G G+ ++ H+ V+ + EE YFFR+ Y D+LL +YE +P FI P R+N Sbjct: 121 VDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVDRLLKFYEENPHFIQPESRKN 179 Query: 195 EVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253 E+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+DAL+NY+T GY + Sbjct: 180 EMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTENEQMYK 239 Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 KFWPAD+H++GK+I+RFH IYWP L++ +LPLPKKVF+HG+IL K K+SKS GNV+DP Sbjct: 240 KFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDP 299 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 + +I+ G+DALRY+L+RE+ G DG + +G +R+N DLAN +GNL++R+V+MI K + Sbjct: 300 VTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYF 359 Query: 374 DGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 +G IP TE DE++++ L+++ E M+N AL+ + LVS Sbjct: 360 NGEIPAFKENVTEFDETLVTFAKDTLKKVEEAMENMEFSVALSSIWQLVS 409 >gi|300173823|ref|YP_003772989.1| methionyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] gi|299888202|emb|CBL92170.1| Methionyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] Length = 703 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 213/523 (40%), Positives = 324/523 (61%), Gaps = 15/523 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +++ + YI+T I YP+ + +G+ Y ++AD AR+HRL G DV F TGTDEHG KI + Sbjct: 33 VQKDKTFYITTPIYYPSGKLQLGNTYTTVLADAAARYHRLLGEDVYFLTGTDEHGLKIQQ 92 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ ++D ++ +D+ ++DISYDDFIRTTE+RH + ++ + + GDIY Sbjct: 93 KAKAEGIPEINYLDGMAKGIKDLWQLMDISYDDFIRTTEERHEKAVQKIFTTLLENGDIY 152 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 KG Y GWYS+ DE Y+ + EVY+ AD + + + V+ ++EE YFF++S Y D Sbjct: 153 KGEYEGWYSVSDEEYFTESQLAEVYRDADDKMIGGKAPSGHDVELVKEEAYFFKMSKYAD 212 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 LL YY++HPEFI P R NE+I+ F+ GL+DL+++R DWGI +P D ++++YVWID Sbjct: 213 WLLDYYKTHPEFIQPEARMNEMINNFIAPGLEDLAVTRTAVDWGISVPGDEKHVIYVWID 272 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY KFWPA++ ++GK+I+RFH IYWP L + + LPK V H Sbjct: 273 ALSNYITALGYDSENTDLFEKFWPANVQLVGKEIVRFHTIYWPIMLHALGIELPKSVIGH 332 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 G+++ K K+SKS GNVI P EV+EE G+DA+RY+L+R + G DG + + RVN Sbjct: 333 GWLVMKDGKMSKSKGNVIYP-EVLEERYGLDAVRYYLLRAMPFGNDGVFTPEDFVARVNF 391 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN +GNL++R+V+MI K +G+IP T+ DE+++ + + +N Q+ Sbjct: 392 DLANDLGNLLNRTVAMINKYENGVIPELRTGKTDFDEALVRTSEDAITDYHKNFQDMRTA 451 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469 AL + +++ ++Y D +PW L K + +A S V+ +R +A+LLQ + K Sbjct: 452 DALENIWTIIRRANKYIDETQPWVLAKDDTQKAVLSNVMAHLAGALRVVAVLLQPVLTKA 511 Query: 470 ANKIFDIL-FVADEN--RCFQSLDQRLKPGFMLHKTFDPIFPR 509 KI++ L F EN R +L G + K +PIFPR Sbjct: 512 PKKIYEQLGFEYPENGVRIAGLTFGKLPTGGTVVKKGEPIFPR 554 >gi|259501900|ref|ZP_05744802.1| methionine-tRNA ligase [Lactobacillus antri DSM 16041] gi|259170077|gb|EEW54572.1| methionine-tRNA ligase [Lactobacillus antri DSM 16041] Length = 674 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 212/519 (40%), Positives = 313/519 (60%), Gaps = 11/519 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ YI+T I YP+ + HIG++Y + D ARF RL G DV F TGTDEHG KI + A Sbjct: 4 QKPTYYITTPIYYPSGKLHIGNSYTTVACDAEARFKRLSGYDVFFLTGTDEHGLKIEQKA 63 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + +VDQ + + + L I+ D FIRTT+ H + +++K D+GDIYKG Sbjct: 64 DKLGMQPQEYVDQMAAGIKQLWQTLKITNDKFIRTTDDYHERAVQKIFQKFLDQGDIYKG 123 Query: 123 CYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDKL 176 Y+GWYS+ DE Y+ + EVY+ +G+ + + VQ ++EE YFF++S Y D L Sbjct: 124 EYTGWYSVDDEEYFTESQLAEVYRDDNGKVIGGKAPSGHEVQLVKEESYFFKMSKYADWL 183 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 + YY+ HP+FI P R NE+++ F+K GL+DL+++R +F+WG+K+P+DPQ+++YVWIDAL Sbjct: 184 MKYYQDHPDFIEPHTRMNEMVNNFLKPGLEDLAVTRTSFNWGVKVPNDPQHVVYVWIDAL 243 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 +NY+T GY D K+WPAD+H++GK+I+RFH IYWP L + LPLPK V HG+ Sbjct: 244 SNYITALGYGSADDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHVIGHGW 303 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNVI P +++ G+DA RY+L+R + G DG + + +VN DLA Sbjct: 304 LTMKDGKMSKSKGNVIYPETLVDRYGLDATRYYLLRAMPFGNDGVFSPEDFVDKVNFDLA 363 Query: 356 NGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K +G I T A T D + ++ + E ++ M AL Sbjct: 364 NDLGNLLNRTVAMINKYQNGRIQGTNDAQTAYDADLEDTAAQAVAEYKQEMDKTHFADAL 423 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 A V LVS ++Y D +PW L K + +A S V+ + +R +A LLQ +P + Sbjct: 424 AAVWKLVSRANKYIDETEPWVLAKDDSKQAELSDVMTHLAKSLRVIAALLQPVMPDAPKE 483 Query: 473 IFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 I L + E LD P + PIFPR Sbjct: 484 ICRQLGLPAEAISLTDLDFNDFPASSQVVAKGTPIFPRL 522 >gi|153854787|ref|ZP_01996021.1| hypothetical protein DORLON_02019 [Dorea longicatena DSM 13814] gi|149752694|gb|EDM62625.1| hypothetical protein DORLON_02019 [Dorea longicatena DSM 13814] Length = 646 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 207/483 (42%), Positives = 310/483 (64%), Gaps = 18/483 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI A Sbjct: 7 KGKYYITTAIAYASGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKAD 66 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AGVT K FVD S + + D+++ SYD FIRTT++ H + ++KK+ D+GDIYKG Sbjct: 67 EAGVTPKEFVDNASGEIKKIWDLMNTSYDKFIRTTDEDHEAQVKKIFKKLYDQGDIYKGA 126 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ DG+ + + +EE YFF++S Y D+L++Y H Sbjct: 127 YEGMYCTPCESFWTESQL---VDGKCPDCGRE-CKPAKEEAYFFKMSKYADRLINYINEH 182 Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEFI P+ R+NE++ +F+ GL+DL +SR +F WGI + DP++I+YVW+DALTNY+T Sbjct: 183 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHIVYVWLDALTNYITGI 242 Query: 243 GYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 GY + DG+ K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L Sbjct: 243 GY--DCDGNSTELFNKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQ 300 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K+SKS GNV+ E+++ GVDA+RYF++ E+ DG + + +R+N+DLAN + Sbjct: 301 GDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTL 360 Query: 359 GNLVSRSVSMILKDYDGMIPTPG-AFTESDESI----LSVCSRVLQEIRENMQNQLIHRA 413 GNLV+R++SM K + G++ G A TE ++++ +V + + M + A Sbjct: 361 GNLVNRTISMTNKYFGGVVTDKGVAETEEEKAVDADLKAVTEDTPKRVDAKMDELRVADA 420 Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 + ++ L ++Y D PW L K DR TVLY +E I+ A LL++F+P+ + Sbjct: 421 ITEIFVLFKRCNKYIDETMPWALAKDEAKKDRLETVLYNLIESIKAGAKLLESFMPETSE 480 Query: 472 KIF 474 KI Sbjct: 481 KIL 483 >gi|255994854|ref|ZP_05427989.1| methionine--tRNA ligase [Eubacterium saphenum ATCC 49989] gi|255993567|gb|EEU03656.1| methionine--tRNA ligase [Eubacterium saphenum ATCC 49989] Length = 614 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 201/452 (44%), Positives = 289/452 (63%), Gaps = 15/452 (3%) Query: 30 IADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI 89 +AD +AR+ RL G DV+F TGTDEHGQK+ A+ AG ++D N D+ + ++I Sbjct: 1 MADAMARYKRLQGFDVMFLTGTDEHGQKLQSVAEAAGKKPLEYIDPIVDNILDLWEKMEI 60 Query: 90 SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149 SYDDFIRTTE RH + + ++ ++ + GDIYKG Y G Y EAY+ D ++ G Sbjct: 61 SYDDFIRTTEPRHEERVKKIFMELYENGDIYKGEYEGMYCKPCEAYWTDSQLEDGCCPDC 120 Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209 PV+ +EE YFF+LS Y D+LLS YE++PE + P RRNE+ISF+K GL DL + Sbjct: 121 ----GRPVESAKEEAYFFKLSNYADRLLSLYENNPEMLQPESRRNEMISFIKQGLDDLCI 176 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDI 267 SR +FDWGIK+P D +++YVW+DALTNY+T GY PD K ++WP D+H++GKDI Sbjct: 177 SRSSFDWGIKVPIDESHVIYVWLDALTNYITALGY---PDDRKLYDRYWPCDVHLVGKDI 233 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 +RFH+I WP+ L+S LPLPKK+ HG++L G K+SKS GNV+DP +IE G DAL+Y Sbjct: 234 IRFHSIIWPSILMSLGLPLPKKILGHGWVLVGGGKMSKSKGNVVDPRVLIERYGTDALKY 293 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PG 381 FL+RE G DG Y+ + L KR+N+DLAN +GNL+SR+VSMI K + IP+ Sbjct: 294 FLLREYTFGNDGPYEDETLIKRINSDLANDLGNLLSRTVSMIEKYKNAKIPSVPTEKLSE 353 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 + + +L++ ++ E M ++AL + +L+S ++Y D +PW L K N Sbjct: 354 NYEAATSELLNLAKGTATKVEEAMDEFAFNKALEAIWTLISRANKYIDQTQPWNLAKDNA 413 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 VL+ EV+R ++IL+ F+ + +I Sbjct: 414 MELDGVLHNLAEVLRMVSILIYPFMHTSSEEI 445 >gi|296273248|ref|YP_003655879.1| methionyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299] gi|296097422|gb|ADG93372.1| methionyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299] Length = 648 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 198/477 (41%), Positives = 313/477 (65%), Gaps = 10/477 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + +YI+T I Y N HIGHAY IIAD+LAR+ RL G F TGTDEHGQKI + Sbjct: 1 MNCHKNVYITTPIYYVNDVAHIGHAYTTIIADMLARYSRLTGKKTFFLTGTDEHGQKIEE 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 +A+ G T+K + D+ S FR + D DI+YD FIRTT++ H + ++K+ +KGDIY Sbjct: 61 SAKLRGKTSKEYADEVSGKFRALWDDFDITYDKFIRTTDEEHKTGVQFAFEKMFNKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G+Y + E ++ + ++ + ++ P ++EE YFF+LSAY+DKLL +Y Sbjct: 121 KGEYEGYYCVSCETFFTEKQL---IEDEFCPDCGKPTNIVKEESYFFKLSAYEDKLLKWY 177 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTN 237 E +P+ ILP ++NE+I+FVKSGL+DLS+SR +FDWG+K+P+ +P+++MYVW+DAL N Sbjct: 178 EENPDCILPRSKKNEIINFVKSGLRDLSISRTSFDWGVKLPESLNEPKHVMYVWLDALLN 237 Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 Y+T GY D ++WPA++ ++GKDILRFHAIYWPAFL+S +LPLPK + +HG+ Sbjct: 238 YITALGY--GNDDKNMEYWPANIQLVGKDILRFHAIYWPAFLMSLDLPLPKHIAAHGWWT 295 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 G+K+SKS GNV++P EV + G+DA RYF++RE+ G+DG + + L R+N+DL N Sbjct: 296 RDGDKMSKSKGNVVNPKEVADAYGLDAFRYFMLREVPFGQDGDFSQKALMDRINSDLGND 355 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 +GNL++R + M K ++ + T + + L + +L I + N ++R L ++ Sbjct: 356 LGNLLNRIIGMSGKYFEYKV-TSKDVVKFHQKELDEVNEILSGIEGYIYNMQLNRYLEEI 414 Query: 418 ISLVSEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++ +PW ++K+ D A ++ + ++ ++A+LL + +P+ +KI Sbjct: 415 WKVLTIANKAIGDYEPWTKMKEGKADEAMALVSLITNIMAKVALLLDSVMPEKISKI 471 >gi|241896681|ref|ZP_04783977.1| methionine--tRNA ligase [Weissella paramesenteroides ATCC 33313] gi|241870162|gb|EER73913.1| methionine--tRNA ligase [Weissella paramesenteroides ATCC 33313] Length = 667 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 205/519 (39%), Positives = 313/519 (60%), Gaps = 11/519 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E++ YI+T I YP+ + HIG+ Y ++AD AR+HRL DV F TGTDEHG KI + Sbjct: 3 EEKKTFYITTPIYYPSGKLHIGNTYTTVLADAAARYHRLLNEDVYFLTGTDEHGLKIEQK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ ++ K +VDQ + + + + L+IS D FIRTT+ H + +++K D+GDIYK Sbjct: 63 AEKLNISPKEYVDQMAADIQKLWSDLEISNDGFIRTTDDYHEKAVQKIFQKFLDQGDIYK 122 Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + EVY+ DG + + V+ ++EE YFF +S Y D Sbjct: 123 GQYEGWYSVDDEEYFTESQLAEVYRDDDGNVIGGKAPSGHEVELVKEESYFFNMSKYADW 182 Query: 176 LLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 LL YY++HP FI P R NE+I +F++ GL+DL+++R F WG+ + DP +++YVWIDA Sbjct: 183 LLDYYKTHPNFIQPSARMNEMIKNFIEPGLEDLAVTRTAFKWGVPVASDPDHVVYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY+ + K+WPA++H++GK+I+RFH IYWP L + L LP+ + HG Sbjct: 243 LSNYITKLGYMSDDTTMFDKYWPANVHLVGKEIVRFHTIYWPIMLHALGLELPETIVGHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 ++ + K+SKS GNV+ P + + G+DA+RY+L+R + G DG + + ++N DL Sbjct: 303 WLTMRDGKMSKSKGNVVYPDTLADRYGIDAVRYYLLRAMPFGNDGIFTPEDFVSKLNYDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K DG+IP T+ D ++ + NMQ+ A Sbjct: 363 ANDLGNLLNRTVAMINKYEDGVIPELNTGLTDFDRELVQTAQDTIATYNANMQSMHTADA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 LA + L+S ++Y D PW L K + D ++V+ +R +AILLQ + + Sbjct: 423 LAAIWQLISRANKYIDETTPWTLAKDDSQADVLASVMAHLAAALRVVAILLQPILTQAPQ 482 Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509 KIF L + D N L + L G + + PIFPR Sbjct: 483 KIFQQLGLQDSNVQISELQFEDLPTGGKVVEKGQPIFPR 521 >gi|307691530|ref|ZP_07633767.1| methionyl-tRNA synthetase [Ruminococcaceae bacterium D16] Length = 655 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 209/493 (42%), Positives = 306/493 (62%), Gaps = 12/493 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ER++ YI+T I YP+ + HIGH Y + D +AR+ RL G DVLF TGTDEHGQKI A Sbjct: 2 ERKRFYITTPIYYPSDKLHIGHTYCTVATDAMARYKRLCGYDVLFLTGTDEHGQKIEDKA 61 Query: 63 QNAGVTTKVFVDQ---NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 + AGV+ K FVD+ R D+ +++IS D FIRTT+ H + ++KK+ +KGDI Sbjct: 62 KEAGVSPKEFVDKIVTGERGVLDLWKLMNISNDRFIRTTDDYHVSAIQKIFKKMYEKGDI 121 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 YKG Y G Y E+++ + ++ DG+ + VQ +EE YFFRLS Y D++ Sbjct: 122 YKGEYVGKYCKPCESFWTESQL---VDGKCPDCGRE-VQDAKEEAYFFRLSKYADRIQHL 177 Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 E +F+ P R NE+++ F+K GL+DL +SR +F WG+ + DP +++YVW+DAL NY Sbjct: 178 LED-TDFLEPRSRVNEMVNNFIKPGLEDLCVSRTSFTWGVPVDFDPGHVVYVWVDALFNY 236 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 T G+L++ KFWPAD+H +GK+I+RFH+I WPA L+S ++PLPKKVF HG++L Sbjct: 237 TTALGFLNDKYDDYEKFWPADVHFVGKEIVRFHSIIWPAMLMSMDMPLPKKVFGHGWLLL 296 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 G K+SKS GNV+DP + E GVDALR+FL+R G DG + + L +N DLAN + Sbjct: 297 DGGKMSKSKGNVVDPYILAERFGVDALRFFLLRTFPFGSDGNFSNEALINTINVDLANDL 356 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNL+SR+VSM+ K ++G +P DE + ++ S + E M++ AL+++ Sbjct: 357 GNLLSRTVSMVGKYFNGTLPKERQSDALDEELTAMVSALRGRYEEQMEHYAFQNALSEIF 416 Query: 419 SLVSEVDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 ++S ++Y D PW L K N R +TV+Y +E +R AILL F+P A +I Sbjct: 417 KVISRANKYIDENAPWVLAKDMEANGVRLATVMYNLLETLRVCAILLTPFIPTSAAEILR 476 Query: 476 ILFVADENRCFQS 488 + D ++S Sbjct: 477 QIGACDACSTWES 489 >gi|139438655|ref|ZP_01772139.1| Hypothetical protein COLAER_01139 [Collinsella aerofaciens ATCC 25986] gi|133775735|gb|EBA39555.1| Hypothetical protein COLAER_01139 [Collinsella aerofaciens ATCC 25986] Length = 533 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 215/534 (40%), Positives = 313/534 (58%), Gaps = 29/534 (5%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + + +I+T I Y NA PH+G AY IIADV AR+ R G +V F TG DEHG+K+A+A Sbjct: 3 QSKPSFFITTPIYYVNADPHLGTAYSTIIADVQARYRRSAGYNVKFLTGMDEHGEKVAEA 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A +T + + D + +F+++ + L+IS DDFIRTTE R H + LW+++ + G +YK Sbjct: 63 AAKHNMTPQEWTDSQAPHFKELWNKLEISNDDFIRTTEPRQHHAVQYLWERMKESGYLYK 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD-----GQYYNAQ-HNPVQWMEEEGYFFRLSAYQDK 175 G Y GWY + DE Y+ D +V KG + GQ+ H P++ ++EE YFF+LSA+QDK Sbjct: 123 GSYDGWYCVPDETYFTDTQVQKGDEEYGSVGQHLCPDCHRPLERVQEESYFFKLSAFQDK 182 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 LL Y+ HP+F+ P R NEV SFV+ GL DLS+SR +FDWGI++P D ++ YVW DAL Sbjct: 183 LLKLYDEHPDFVEPAFRMNEVRSFVEGGLNDLSVSRTSFDWGIQVPFDEGHVTYVWFDAL 242 Query: 236 TNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 NY+T GY + D ++A+ WPA H++GKDI+RFH + WPA L++ LP+ VF+ Sbjct: 243 LNYMTAVGYGVDTDEARAELSYRWPAQFHIVGKDIIRFHCVIWPAMLMAIGEALPEHVFA 302 Query: 293 HGFI------LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 HGF+ K EK+SKS GN I P +VI+ +GV+ RY+ + ++ G DG D + Sbjct: 303 HGFLTVRNAETGKAEKMSKSRGNAIAPQDVIDMLGVEGYRYYFMTDVVPGTDGAISFDRM 362 Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENM 405 ++ NADLAN GNL+SRS++M K +DG P P +F D + + +++ M Sbjct: 363 EQVYNADLANSWGNLISRSLNMSAKYFDGCAPAKPASFDAFDNPLAKIADGLVERYMAKM 422 Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQ 463 A +V+ L+ + Y + +PW L K D + V+Y +E IR A LL Sbjct: 423 DVLDYGGAKDEVMELIHAANHYIEDSEPWALAKDEAKADELAFVIYNLLEAIRIAAHLLM 482 Query: 464 AFVPKLANKIFDILFVADENR-------CFQSLDQRLKPGFMLHKTFDPIFPRF 510 +P+ + + L DE C L L G + K DP+FPR Sbjct: 483 PLMPQTSAEALRRLSCEDEAASDDLKGICAWGL---LAGGQPVEKG-DPLFPRL 532 >gi|294782393|ref|ZP_06747719.1| methionine--tRNA ligase [Fusobacterium sp. 1_1_41FAA] gi|294481034|gb|EFG28809.1| methionine--tRNA ligase [Fusobacterium sp. 1_1_41FAA] Length = 637 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 211/514 (41%), Positives = 316/514 (61%), Gaps = 13/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++ST I Y N PH+G AY I ADV+ R+++ G+D F TG DEHGQK+ +AA+ Sbjct: 2 KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFVTGLDEHGQKVEQAAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + + D+ + NF++M LDI YDDFIRTTE+RH + + + + +KGDIYKG Sbjct: 62 QNGFTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEERHKKAVKKILEIVHEKGDIYKGE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + E ++ ++++ G++ + V ++EE YFF++S Y D LL + + H Sbjct: 122 YEGKYCVSCETFFPENQL-NGSNKCPDCGKELTV--LKEESYFFKMSKYADALLKHIDEH 178 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FILP RRNEVISF+K GL+DLS+SR TF WGI I P +I YVW DALTNY+T+ G Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIEFAPGHITYVWFDALTNYITSAG 238 Query: 244 YLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 + +N D KFW +H+IGKDI+RFHAI WP LLSA + LP + +HG+ +GE Sbjct: 239 F-ENDDKKFDKFWNDARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP I++ GVDA RY+L+RE G DG Y G+ R+N+DLAN +GNL Sbjct: 298 KMSKSKGNVVDPYNEIKKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R++ M K ++G++ A E D+ I ++ ++++ + M RAL + + Sbjct: 358 LNRTLGMYKKYFNGIVVASSASEEIDDVIKAMFDETIKDVEKYMYLFEFSRALETIWRFI 417 Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S +++Y D PW L K T R + V+ + E + ++A L+ ++P+ A KI + L + Sbjct: 418 SRLNKYIDETMPWALAKDETKKARLAAVMNILSEGLYKIAFLIAPYMPESAQKISNQLGI 477 Query: 480 ADENRCFQSLDQR----LKPGFMLHKTFDPIFPR 509 + + + + K G L PIFPR Sbjct: 478 EKDITSLEFDEIKEWNIFKEGHQLGNA-SPIFPR 510 >gi|300814290|ref|ZP_07094562.1| methionine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511557|gb|EFK38785.1| methionine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 653 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 215/513 (41%), Positives = 315/513 (61%), Gaps = 11/513 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ Y++T I YP+ HIGH Y + AD + RF L G +V FTTGTDEHGQKIA AQ Sbjct: 2 KKNFYLTTPIYYPSDNLHIGHTYCTVAADCIKRFKELQGYNVFFTTGTDEHGQKIATKAQ 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+ K +VD+ N + + + LDI YD FIR+T+ +H + L+KK+ DKGDIYKG Sbjct: 62 EAGMEPKAYVDKIVANIKKLWESLDIQYDAFIRSTDAQHEKDVQDLFKKLYDKGDIYKGE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G+Y E+++ +V D Q +EE YFFRLS Y+DKLL ++ Sbjct: 122 YEGYYCTPCESFWTQAQV---GDDHACPDCGRVTQLTKEESYFFRLSKYKDKLLDLLNNN 178 Query: 184 PEFILPIERRNEVI-SFVKS--GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 EF P R+NE+I +F++S GL+DLS+SR + WG+++P D ++++YVWIDAL YL+ Sbjct: 179 EEFTEPAFRKNELIKNFIESAEGLEDLSVSRSSLTWGVQVPFDNKHVIYVWIDALLCYLS 238 Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 + D K +FWPAD+H++GK+I RFHA+ WPA L++ +LPLPKK+F HG+IL Sbjct: 239 AIEF--GTDKEKFNEFWPADVHLVGKEIFRFHALIWPALLMALDLPLPKKIFGHGWILFD 296 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 +K+SKS GNV+ P +I+ GVDAL+YFL+RE + G DG + K+ +R+N+DLAN +G Sbjct: 297 NDKMSKSKGNVVYPEPIIKLYGVDALKYFLLREFSFGSDGSFTKEKFMQRLNSDLANDLG 356 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL+SR+VSMI K DG+I P E D+ + ++ V ++ E M++ + AL ++ Sbjct: 357 NLLSRTVSMITKYNDGIIEKPNREEEIDKDLENMAISVKAKVEEAMEHFKFNVALEEIWK 416 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L+ ++Y D PW L K N DR +TVLY E +R +++L+ F+ + +I L Sbjct: 417 LIRRSNKYVDETTPWILAKDEKNKDRLNTVLYNLAESLRIISVLINPFITNTSKEIIRQL 476 Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + ++ S L P IFPR Sbjct: 477 GLEEKVDWESSQKWGLIPNATKVNKGQIIFPRL 509 >gi|148543447|ref|YP_001270817.1| methionyl-tRNA synthetase [Lactobacillus reuteri DSM 20016] gi|184152856|ref|YP_001841197.1| methionyl-tRNA synthase [Lactobacillus reuteri JCM 1112] gi|227363597|ref|ZP_03847714.1| methionyl-tRNA synthetase [Lactobacillus reuteri MM2-3] gi|325681791|ref|ZP_08161310.1| methionine--tRNA ligase [Lactobacillus reuteri MM4-1A] gi|148530481|gb|ABQ82480.1| methionyl-tRNA synthetase [Lactobacillus reuteri DSM 20016] gi|183224200|dbj|BAG24717.1| methionyl-tRNA synthase [Lactobacillus reuteri JCM 1112] gi|227071393|gb|EEI09699.1| methionyl-tRNA synthetase [Lactobacillus reuteri MM2-3] gi|324978882|gb|EGC15830.1| methionine--tRNA ligase [Lactobacillus reuteri MM4-1A] Length = 675 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 208/520 (40%), Positives = 318/520 (61%), Gaps = 11/520 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +++ YI+T I YP+ + HIG++Y I D ARF RL G DV + TGTDEHG KI + Sbjct: 3 EQKPTYYITTPIYYPSGKLHIGNSYTTIACDAEARFKRLMGYDVFYLTGTDEHGLKIEQK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G+ + +VDQ + +++ L+I+ D FIRTT+ H + +++++ D+GDIYK Sbjct: 63 AEKLGMKPQEYVDQMAAQIKELWKKLEITNDKFIRTTDDYHEKAVQKIFQQLLDQGDIYK 122 Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y+GWYS+ DE Y+ + EVY+ DG + + VQ +EEE YFF++S Y + Sbjct: 123 GKYTGWYSVDDEEYFTESQLAEVYRDEDGNVIGGKAPSGHEVQLVEEESYFFKMSKYANW 182 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L++YY+ HP+FI P R NE+I+ F+K GL+DL+++R +F+WG+K+P DP++++YVWIDA Sbjct: 183 LMNYYKEHPDFIEPQSRMNEMINNFLKPGLEDLAVTRTSFNWGVKVPSDPKHVVYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L + LPLPK + HG Sbjct: 243 LSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHIIGHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 ++ + K+SKS GNVI P +++ G+DA RY+L+R + G DG + + +VN DL Sbjct: 303 WLTMRDGKMSKSKGNVIYPETLVDRYGLDATRYYLLRAMPFGNDGVFSPEDFVDKVNYDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +G ++ T A T+ D + S V+ E +E M A Sbjct: 363 ANDLGNLLNRTVAMINKYQNGKLVGTNDATTDFDADLEQTASDVIAEYKELMDKTRFAEA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 LA V LVS ++Y D +PW L K + D S V+ + + +A L+Q +P Sbjct: 423 LATVWKLVSRANKYIDETEPWVLAKDDSKKDVLSDVMTHLAKSLWIIAALIQPIMPHAPK 482 Query: 472 KIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 +I + L + + L P + PIFPR Sbjct: 483 QIVEQLGIEGTDLSLTDLQFNDFPAEAQVVAKGTPIFPRL 522 >gi|187251862|ref|YP_001876344.1| methionyl-tRNA synthetase [Elusimicrobium minutum Pei191] gi|186972022|gb|ACC99007.1| Methionyl-tRNA synthetase [Elusimicrobium minutum Pei191] Length = 500 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 212/521 (40%), Positives = 311/521 (59%), Gaps = 42/521 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I Y NA PHIGH+Y + D+++R+ R G +V F TGTDEHG I KAA+ Sbjct: 3 KKFYITTPIYYVNAYPHIGHSYTTLACDIVSRYKRSRGEEVHFLTGTDEHGINIEKAAEK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG++ K + DQ ++++ +LDI YDDFIRTT+KRH +T + +++ + KGDIY G Y Sbjct: 63 AGMSPKAWCDQVVDAYKELWKILDIKYDDFIRTTDKRHEETVQQIFEILIAKGDIYLGHY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG Y EAY ++ E +G P+ ++EE YFF+LS YQD LL +YES+P Sbjct: 123 SGMYCNSCEAYMDETEAPEGI----CPIHKKPLTEVKEETYFFKLSKYQDALLKFYESNP 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 F+ P R E+ +FVKSGLKDLS++R WGI + +P++ +YVW DAL NY + G Sbjct: 179 SFLNPKFRSAEITNFVKSGLKDLSVTRTKVAWGIPVKSNPKHTIYVWFDALINYASAAGL 238 Query: 245 LDNPDGSKAKF---------------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289 N K F WPAD+H+IGK+I RFH + WPA L++ +P PKK Sbjct: 239 GLNICEDKEFFKEELKKVGLNSFEDVWPADVHLIGKEIARFHMVIWPAMLMALGIPTPKK 298 Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 VF+HG+ +GEK+SK+LGN++DP +V +E G+D LR+FL RE+ G DG + D KR Sbjct: 299 VFAHGWWTVEGEKMSKTLGNIVDPKKVADEYGLDPLRFFLFREVPFGADGDFSMDSFIKR 358 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 NADLAN +GNL+SR+++M +K G +P G E +L + V + + E+M Sbjct: 359 YNADLANDLGNLLSRTLNMAVK--YGDLPAEG---EYKSPLLVKAANVDKAVEEHMSELA 413 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 + + L V SL+ +++RY D KPW L KT+ A V+ + +R++A+ ++ F+P Sbjct: 414 LDKTLEAVWSLIGDMNRYIDETKPWALAKTDEAAAKNVIIDLIHALRKVAVWVEPFMPAT 473 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + +RL PG + + + P+FPR Sbjct: 474 G----------------AEMKKRLAPGPV--QKYAPLFPRL 496 >gi|310689727|pdb|3KFL|A Chain A, Leishmania Major Methionyl-Trna Synthetase In Complex With Methionyladenylate And Pyrophosphate Length = 564 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 209/500 (41%), Positives = 298/500 (59%), Gaps = 17/500 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 MK+++ + +T I Y NA PHIGH Y +I DVL R+HR+ G +V TGTDEHGQK+A+ Sbjct: 22 MKKQKVFFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHGQKVAE 81 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA GV+ F S F+ ++ + FIRTT H + +WKK++ KGDIY Sbjct: 82 AAAKQGVSPMDFTTSVSSEFKQCFQEMNYDMNYFIRTTNPTHEKLVQDIWKKLAAKGDIY 141 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGAD-----GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE++ V G D + + V W+EEE Y FRLSA++++ Sbjct: 142 LGKYEGWYSVSDESFLTAQNVADGVDRDGKPCKVSLESGHVVTWVEEENYMFRLSAFRER 201 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK---TFDWGIKIPDDPQYIMYVWI 232 LL Y+ HP I+P RR EVI V+ GL DLS+SRK +W I +P D ++ +YVW+ Sbjct: 202 LLKYFHDHPNCIVPEFRRREVIKTVEKGLFDLSISRKRESVMNWSIPVPGDERHCIYVWL 261 Query: 233 DALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 DAL NY T DG++ WPAD+HV+GKDIL+FHAIYWPAFL+SA L Sbjct: 262 DALFNYYTGALTRVATDGTETLDEDHHALNRWPADVHVVGKDILKFHAIYWPAFLMSAEL 321 Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 PLP+++ SHG+ +KISKSLGN DP+E +E G+DAL+YFL+RE DG Y Sbjct: 322 PLPERLVSHGWWTKDHKKISKSLGNAFDPVEKAKEFGIDALKYFLMRESNFQDDGDYSDK 381 Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404 + R+N +LA+ +GNLVSR V+ + + +GM P P ++ESD+++++ + + + Sbjct: 382 NMVARLNGELADTLGNLVSRCVAPKI-NVNGMWPEPAEYSESDKTLIASLNNLAGTVDHY 440 Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 I AL + ++ ++ Y PW+L K + R TVLYVT+E +R + LQ Sbjct: 441 YCLPDIQHALIAIFDVLRSLNAYVTENAPWKLVKMDTARLGTVLYVTMEGLRICTMFLQP 500 Query: 465 FVPKLANKIFDILFVADENR 484 +P+ A +I D L V + R Sbjct: 501 VMPQKAKEIMDALGVPEAAR 520 >gi|167755124|ref|ZP_02427251.1| hypothetical protein CLORAM_00628 [Clostridium ramosum DSM 1402] gi|237733450|ref|ZP_04563931.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|167705174|gb|EDS19753.1| hypothetical protein CLORAM_00628 [Clostridium ramosum DSM 1402] gi|229383485|gb|EEO33576.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 643 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 204/486 (41%), Positives = 311/486 (63%), Gaps = 21/486 (4%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 MK + Y++TAI Y + +PHIG+ YE+I+AD +ARF R +G +V F TGTDEHGQKI Sbjct: 1 MKNEKDYYLTTAITYTSGKPHIGNTYEIILADAIARFKRQEGYNVYFQTGTDEHGQKIEL 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+ K FVD+ + + + D++D +YD F+RTT+ H + ++KK+ D+GDIY Sbjct: 61 KAKEAGIPPKQFVDEKAGEVKRIWDLMDTTYDRFMRTTDDYHKSQVQKIFKKLYDQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 G Y G Y E+++ + ++ G G+ ++A+ EE YFF+LS Y D+L Sbjct: 121 LGHYEGKYCTACESFFTESQLVDGKCPDCGGEVHDAK--------EEAYFFKLSKYADRL 172 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 + + E+HPEFI P+ R+NE+++ F+K GL+DL +SR +F W I + DP++++YVWIDAL Sbjct: 173 IEHIETHPEFIQPVSRKNEMMNNFLKPGLQDLCVSRTSFTWSIPVDFDPKHVVYVWIDAL 232 Query: 236 TNYLTTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291 +NY+T GY + DG+ K+WPADLH+IGKDI+RFH IYWP L++ ++PLPK+VF Sbjct: 233 SNYITGLGY--DVDGNHGELYQKYWPADLHLIGKDIVRFHTIYWPIMLMALDIPLPKQVF 290 Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 H ++L K+SKS GNVI ++++ GVDA+RY+++ EI DG D L +R+N Sbjct: 291 GHPWLLQGESKMSKSKGNVIYADDLVDIFGVDAVRYYVLHEIPYDNDGSITWDLLVERIN 350 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +DLAN +GNLV+R+++M K + G++ P D+ ++ + + +++ M Sbjct: 351 SDLANVLGNLVNRTIAMSNKYFGGIVNNPKVTEAVDDELIEIALAMPKKVIGKMDEFKSS 410 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 AL + +L+ ++Y D PW L K T DR +TVLY +E IR AI L ++P Sbjct: 411 DALDAIFTLLRRTNKYIDETMPWALAKDETKRDRLATVLYNLIESIRFAAIALIPYMPST 470 Query: 470 ANKIFD 475 ANKI D Sbjct: 471 ANKILD 476 >gi|256371339|ref|YP_003109163.1| methionyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331] gi|256007923|gb|ACU53490.1| methionyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331] Length = 503 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 205/467 (43%), Positives = 292/467 (62%), Gaps = 9/467 (1%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + YI+T I Y N PH+G AY +I+AD +AR+HRL G +V F TGTDEHG KIA++A+ Sbjct: 3 RFYITTPIFYVNGDPHLGTAYAVILADAIARWHRLIGDEVRFVTGTDEHGLKIAQSAEAH 62 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV+ + +VD S FR D L++SYDDFIRTTE RHH + + ++I D+GDIY G Y Sbjct: 63 GVSPQAWVDVTSAQFRRAWDALEVSYDDFIRTTEPRHHRSVQRFLERIHDRGDIYLGTYE 122 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y +R EAYY E+ G+ H + M EE YFF LS YQD+LL +YE HPE Sbjct: 123 GLYCVRCEAYYQPGELEP---GELCPVHHVACERMREENYFFALSRYQDRLLEHYERHPE 179 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 I P RRNEV+ F++ GL D+S++R + DWG+++P D +++ YVW DAL NYLT GY Sbjct: 180 AIWPESRRNEVLRFIEGGLTDISITRTSIDWGVRVPWDSRHVFYVWYDALVNYLTAIGYA 239 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 ++ A +WPA H++GKDILRFHA++WPA L+A + P ++ G++L++GEK+SK Sbjct: 240 ED-SAEVAAWWPAAHHLLGKDILRFHAVWWPAMCLAAGIDPPAQLIVTGWLLNEGEKMSK 298 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SL N IDP+ V + DALR++LVR A G D + L NA+LANG GNLV+R Sbjct: 299 SLANQIDPLGVQRALSADALRHYLVRSSAIGPDWDVSLEALVALYNAELANGFGNLVARV 358 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 S+I++ G +P A T DE + + ++ +R + + A+ I LV ++ Sbjct: 359 GSLIVQRLGGHVPDAPA-TPPDELAI---AETIEAVRAGWERWRPNDAMDAAIGLVHRLN 414 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 Y +A +PW L K + + A++VL E R ++LL +P A + Sbjct: 415 AYLEATEPWRLAKGSAE-AASVLGTAREGARLASVLLSPAIPDGAER 460 >gi|260494223|ref|ZP_05814354.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_33] gi|260198369|gb|EEW95885.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_33] Length = 636 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 212/514 (41%), Positives = 318/514 (61%), Gaps = 13/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++ST I Y N PH+G AY I ADV+ R+++ G+D F TG DEHGQK+ +AA+ Sbjct: 2 KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTYFMTGLDEHGQKVEQAAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + + D+ + NF++M LDI YDDFIRTTE RH R + ++ KGDIYKG Sbjct: 62 QNGYTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVRRILDMVNAKGDIYKGE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + E ++ ++++ G++ + ++ ++EE YFF++S Y D LL + E H Sbjct: 122 YEGKYCISCETFFPENQL-NGSNKCPDCGKE--LRVLKEESYFFKMSKYADALLKHIEEH 178 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FILP RRNEVISF+K GL+DLS+SR TF WGI I P +I YVW DALTNY+T+ G Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYITSAG 238 Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 + +N + KFW +H+IGKDI+RFHAI WP LLSA + LP + +HG+ +GE Sbjct: 239 F-ENDEKKFDKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV++P + I++ GVDA RY+L+RE G DG Y G+ R+N+DLAN +GNL Sbjct: 298 KMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R++ M K ++G++ D+ I S+ + V++++ + M RAL + + Sbjct: 358 LNRTLGMYKKYFNGVVVASSTAEPIDDEIKSMFNDVIKDVEKYMYLFEFSRALETIWKFI 417 Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S +++Y D PW L K T R +TV+ + E + ++A L+ ++P+ A KI + L + Sbjct: 418 SRLNKYIDETMPWSLAKDETKKARLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477 Query: 480 ADENRCFQSLDQR----LKPGFMLHKTFDPIFPR 509 + + D + K G L + PIFPR Sbjct: 478 NKDITNVKFDDIKGWDIFKAGHKLGEA-SPIFPR 510 >gi|254977164|ref|ZP_05273636.1| methionyl-tRNA synthetase [Clostridium difficile QCD-66c26] gi|255094494|ref|ZP_05323972.1| methionyl-tRNA synthetase [Clostridium difficile CIP 107932] gi|255316245|ref|ZP_05357828.1| methionyl-tRNA synthetase [Clostridium difficile QCD-76w55] gi|255518906|ref|ZP_05386582.1| methionyl-tRNA synthetase [Clostridium difficile QCD-97b34] gi|255652085|ref|ZP_05398987.1| methionyl-tRNA synthetase [Clostridium difficile QCD-37x79] gi|260685058|ref|YP_003216343.1| methionyl-tRNA synthetase [Clostridium difficile CD196] gi|260688716|ref|YP_003219850.1| methionyl-tRNA synthetase [Clostridium difficile R20291] gi|260211221|emb|CBA66728.1| methionyl-tRNA synthetase [Clostridium difficile CD196] gi|260214733|emb|CBE07412.1| methionyl-tRNA synthetase [Clostridium difficile R20291] Length = 645 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 201/475 (42%), Positives = 293/475 (61%), Gaps = 7/475 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + Y++T I YP+ HIGH Y + AD +ARF R G DV F TGTDEHG+KI K A Sbjct: 3 KPSFYVTTPIYYPSGGLHIGHTYSTVAADTIARFKRFCGYDVKFLTGTDEHGEKIQKKAI 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ ++D ++ + + + +DISYDDFIRTTEKRH D + ++ K+ ++GDIYKG Sbjct: 63 EQGMSEIEYLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ +G + V+ EE YFFRLS Y+D+L ++ Sbjct: 123 YEGRYCTPCESFWTESQLLEGNKCPDCGRETYLVK---EESYFFRLSKYEDRLKELFKDD 179 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 F P R+NE+++ F+ GL+DLS++R TFDWGIK+P D ++++YVW+DAL NY+T Sbjct: 180 -SFCFPAARKNEMVANFLDKGLEDLSVTRTTFDWGIKVPFDEKHVIYVWVDALCNYITAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY+ + D K+WPA++ ++GK+I+RFH I WPA L++ L +PK+VF HG+IL +K Sbjct: 239 GYMTDNDEEFKKYWPANVQIVGKEIVRFHTIIWPALLMALGLEVPKQVFGHGWILFADDK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+ P +IE G+D L+YFL+RE A G+DG Y R+N DLAN +GNL+ Sbjct: 299 MSKSKGNVVYPEPIIERYGIDTLKYFLLREFAFGQDGSYTHRNFVTRINYDLANDLGNLI 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+V+M+ K +G+IPT T+ D + + M H AL V LV Sbjct: 359 SRTVAMVEKYNNGIIPTAKVSTDFDADLKEQAVSTRENFEAEMDKMQFHEALESVWKLVR 418 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 ++Y D PW L K T D TVLY E IR +A L+ + + ANKI++ Sbjct: 419 RTNKYIDETMPWALAKDETKKDELDTVLYNLCESIRIIATLINPIMNETANKIYE 473 >gi|170782642|ref|YP_001710976.1| methionyl-tRNA synthetase [Clavibacter michiganensis subsp. sepedonicus] gi|169157212|emb|CAQ02395.1| putative methionyl tRNA synthetase [Clavibacter michiganensis subsp. sepedonicus] Length = 528 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 207/484 (42%), Positives = 300/484 (61%), Gaps = 9/484 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E YI+T I Y N PHIGHAY + ADVLAR+HR G D F TGTDEHGQKI + Sbjct: 4 MSRGEPFYITTPIFYVNDVPHIGHAYTEVAADVLARWHRQRGDDTWFLTGTDEHGQKILR 63 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A T K + D+ + +++ + + +DIS DDFIRTT+ RH ++ ++ +++ D G I Sbjct: 64 TATANDTTPKAWADRLVTESWQPLLEAVDISNDDFIRTTDARHEESVKVFLQRLHDAGFI 123 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHN-PVQWMEEEGYFFRLSAYQDK 175 Y G Y G+Y + E Y ++ +G +GQ A H+ PV+ +EE+ YFFR+S + ++ Sbjct: 124 YTGEYKGYYCVGCEEYKQPSDLLEGTGPFEGQLVCAIHSKPVELLEEKNYFFRMSDFGER 183 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 LL++YE P+FI P RNE++SFV+ GL+DLS+SR +FDWGI IP D +++YVW +AL Sbjct: 184 LLAFYEERPDFIQPESARNEILSFVRRGLEDLSISRSSFDWGIPIPWDESHVVYVWFEAL 243 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+T GY + D + WPA H++GKDILRFHA+ WPA L++ P++VF HG+ Sbjct: 244 MNYVTAIGYGVDDDAFHRR-WPA-THLVGKDILRFHAVIWPAMLMALGEEPPRRVFGHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L GEK+SKS I P + + G+DA RY+ +R A G+DG + + L R A+LA Sbjct: 302 LLVGGEKMSKSKLTGIVPQTITDTFGIDAFRYYFMRAFAFGQDGSFSWEDLSARYQAELA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 NG GNL SR ++M+ + +DG IP TE+D + SV + ++ IH +LA Sbjct: 362 NGFGNLSSRVIAMVGRYFDGRIPEANELTEADLRVQSVARAAASTADDAIERLAIHESLA 421 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473 V +LV E++ Y +Q+PW L K + DRA TVL+ V + LA+LL +P K+ Sbjct: 422 AVWTLVDELNGYITSQEPWALAKKDEDRARLETVLHTAVRGLGTLAVLLAPVLPGATAKL 481 Query: 474 FDIL 477 + L Sbjct: 482 WTAL 485 >gi|269925297|ref|YP_003321920.1| methionyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798] gi|269788957|gb|ACZ41098.1| methionyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798] Length = 528 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 219/521 (42%), Positives = 320/521 (61%), Gaps = 23/521 (4%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + YI+TAI Y NA+PHIG A E++ DVLAR+HRL G D F TGTD++ K +AA+ Sbjct: 5 RYYITTAIPYVNAKPHIGFALELVQTDVLARYHRLIGDDTRFLTGTDDNALKNVQAAEAE 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDIYKGCY 124 G++TK VD+N+ F+ + + L +S+DDFIRT+ EKRH D + LW+ GDIYK Y Sbjct: 65 GISTKELVDRNAELFKALREPLAVSFDDFIRTSGEKRHIDGVQKLWRACQRSGDIYKRVY 124 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + E +Y+++E+ G ++ + +EEE YFFRLS Y D+L+S ES Sbjct: 125 KGLYCVGCEQFYSEEELVNGLCPEHLTRP----ELVEEENYFFRLSKYTDRLISIIESGE 180 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 ILP RRNEV+SF++ GL+D S+SR + WGI +PDDP +MYVW DAL NY+T Sbjct: 181 LRILPETRRNEVLSFIRRGLEDFSISRASSRARGWGIPVPDDPDQVMYVWFDALGNYITA 240 Query: 242 TGYLDNPDGSKAKFW---PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 Y + + + ++W P HVIGK ILRFHA+YWPA LLSA PLP ++ H ++ Sbjct: 241 LDYAYDGELYR-RYWLENPHRTHVIGKGILRFHAVYWPAMLLSAGEPLPTTIYVHEYLTI 299 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 G+KISKSLGNVIDPI ++E G DALRY+ VRE++ +D + D L R NADLAN + Sbjct: 300 NGQKISKSLGNVIDPISIVERFGTDALRYWFVREVSRTEDTDFTWDRLVTRYNADLANDL 359 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNL++R+VSMI + +G +P+P T+ ++ + + + ++I + + + A+ + Sbjct: 360 GNLLNRTVSMIRRYREGKVPSPSDSTDLEQDLRQIAEGIPEKIYKYLDEFDLRAAITAIW 419 Query: 419 SLVSEVDRYFDAQKPWELKKTNPD-------RASTVLYVTVEVIRQLAILLQAFVPKLAN 471 LV+ +RY + PW L + + R TVLY E +R +A+ L F+P ++ Sbjct: 420 DLVTRANRYVEESAPWLLARQEKNGDGAASSRLDTVLYSLAESLRVIAVHLSPFLPLTSS 479 Query: 472 KIFDILFV-ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPR 509 KI + L + AD + + L+PG ++ + PIFPR Sbjct: 480 KILEQLGIGADSQTKWPDVAAWGGLQPGTLVGEP-KPIFPR 519 >gi|322498828|emb|CBZ33901.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 747 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 209/499 (41%), Positives = 297/499 (59%), Gaps = 17/499 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K+++ + +T I Y NA PHIGH Y +I DVL R+HR+ G +V TGTDEHGQK+A+A Sbjct: 206 KKQKVFFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHGQKVAEA 265 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A GV+ F S F++ ++ + FIRTT H + +WKK+ KGDIY Sbjct: 266 AAKQGVSPMDFTTSVSSEFKECFKEMNYDMNYFIRTTNPTHEKLVQDIWKKLEAKGDIYL 325 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKL 176 G Y GWYS+ DE++ V G D + + V W+EEE Y FRLSA++++L Sbjct: 326 GKYEGWYSVSDESFLTAQNVADGVDKDGKPCKVSLESGHVVTWVEEENYMFRLSAFRERL 385 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK---TFDWGIKIPDDPQYIMYVWID 233 L Y+ HP I+P RR EVI V+ GL DLS+SRK +W I +P D ++ +YVW+D Sbjct: 386 LKYFHDHPNCIVPEFRRREVIKTVEKGLFDLSISRKRESVMNWSIPVPGDERHCIYVWLD 445 Query: 234 ALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285 AL NY T DG++ WPAD+HV+GKDIL+FHAIYWPAFL+SA LP Sbjct: 446 ALFNYYTGALTRVAADGTETLDEDHHTLNRWPADVHVVGKDILKFHAIYWPAFLMSAELP 505 Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345 LP+++ SHG+ KISKSLGN DP+E +E G+DAL+YFL+RE DG Y Sbjct: 506 LPERLVSHGWWTKDRRKISKSLGNAFDPVEKAKEFGIDALKYFLMRESNFQDDGDYSDKN 565 Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405 + R+N +LA+ +GNLVSR V+ + + +GM P P ++ESD+++++ + + + Sbjct: 566 MVARLNGELADTLGNLVSRCVAPKI-NVNGMWPEPAEYSESDKTLIASLNNLAGTVDHYY 624 Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465 I AL + ++ ++ Y PW+L KT+ R TVLYVT+E +R + LQ Sbjct: 625 CLPDIQHALIAIFDVLRSLNAYVTENAPWKLVKTDTARLGTVLYVTMEGLRICTMFLQPV 684 Query: 466 VPKLANKIFDILFVADENR 484 +P+ A +I D L V + R Sbjct: 685 MPQKAKEIMDALGVPEAAR 703 >gi|291545198|emb|CBL18307.1| methionyl-tRNA synthetase [Ruminococcus sp. 18P13] Length = 647 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 207/477 (43%), Positives = 300/477 (62%), Gaps = 12/477 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+TAIAY + +PHIG+ YE++ D +AR+ R+ G DV F TGTDEHG KI + A+ Sbjct: 3 KKPYYITTAIAYASRKPHIGNTYEVVFTDAVARYKRMQGYDVFFLTGTDEHGVKIEELAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 + G+T K VD+ +D+ ++ ISYD FIRTT+ RH + + ++KK+ D+GDIYK Sbjct: 63 SEGITPKEHVDKVVGEIQDICKLMHISYDGFIRTTDPRHEEVVQKIFKKLYDQGDIYKSE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ ++ DG+ + VQ +EE YF RLS YQ L Y E+H Sbjct: 123 YEGMYCTPCESFWTPSQL---VDGKCPDCGRE-VQPAKEEAYFLRLSKYQQWLEEYIETH 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI+P ++ E+++ F+K GL+DL +SR TF WGI + DP++++YVW+DAL+NY+T Sbjct: 179 PDFIVPEGKKKEMMNNFIKPGLQDLCVSRTTFQWGIPVTFDPKHVIYVWVDALSNYITAM 238 Query: 243 GYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GY +PDGS K+WP D HVIGKDI+RFH+IYWP L + L LP+++F H +IL Sbjct: 239 GY--DPDGSSDQFKKYWPCDCHVIGKDIMRFHSIYWPVMLHALGLELPRQLFGHNWILFG 296 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 +K+SKS GNVI +V++ GVDA RY+L+ E+ G DG + L +R N DLAN +G Sbjct: 297 EDKMSKSRGNVIYASDVVDAFGVDAARYYLLSEMPYGSDGSITYESLIERFNTDLANTLG 356 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLV+R+++M K + G+I A D + + + ++E+ M + L VIS Sbjct: 357 NLVNRTIAMAQKYFGGVIQPADAAEPVDADLRATALKTVEEVDRLMNQYRMADTLDAVIS 416 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 L ++Y D PW L K R VLY +E IR LA+LLQ F+P+ A KIF Sbjct: 417 LARRSNKYIDETMPWVLAKDEAQKPRLGAVLYNLLESIRFLAVLLQPFMPETAEKIF 473 >gi|255102750|ref|ZP_05331727.1| methionyl-tRNA synthetase [Clostridium difficile QCD-63q42] gi|255308571|ref|ZP_05352742.1| methionyl-tRNA synthetase [Clostridium difficile ATCC 43255] Length = 645 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 201/475 (42%), Positives = 292/475 (61%), Gaps = 7/475 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + Y++T I YP+ HIGH Y + AD +ARF R G DV F TGTDEHG+KI K A Sbjct: 3 KPSFYVTTPIYYPSGGLHIGHTYSTVAADTIARFKRFCGYDVKFLTGTDEHGEKIQKKAI 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ ++D ++ + + + +DISYDDFIRTTEKRH D + ++ K+ ++GDIYKG Sbjct: 63 EQGMSEIEYLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ +G + V+ EE YFFRLS Y+D+L ++ Sbjct: 123 YEGRYCTPCESFWTESQLLEGNKCPDCGRETYLVK---EESYFFRLSKYEDRLKELFKDD 179 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 F P R+NE+++ F+ GL+DLS++R TFDWGIK+P D ++++YVW+DAL NY+T Sbjct: 180 -SFCFPAARKNEMVANFLDKGLEDLSVTRTTFDWGIKVPFDEKHVIYVWVDALCNYITAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY+ + D K+WPA++ ++GK+I+RFH I WPA L++ L +PK+VF HG+IL +K Sbjct: 239 GYMTDNDEEFKKYWPANVQIVGKEIVRFHTIIWPALLMALGLEVPKQVFGHGWILFADDK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+ P +IE G+D L+YFL+RE A G+DG Y R+N DLAN +GNL+ Sbjct: 299 MSKSKGNVVYPEPIIERYGIDTLKYFLLREFAFGQDGSYTHRNFVTRINYDLANDLGNLI 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+V+M+ K +G+IPT T D + + M H AL V LV Sbjct: 359 SRTVAMVEKYNNGIIPTAKVSTNFDADLKEQAVSTRENFEAEMDKMQFHEALESVWKLVR 418 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 ++Y D PW L K T D TVLY E IR +A L+ + + ANKI++ Sbjct: 419 RTNKYIDETMPWALAKDETKKDELDTVLYNLCESIRIIATLINPIMNETANKIYE 473 >gi|225387105|ref|ZP_03756869.1| hypothetical protein CLOSTASPAR_00855 [Clostridium asparagiforme DSM 15981] gi|225046791|gb|EEG57037.1| hypothetical protein CLOSTASPAR_00855 [Clostridium asparagiforme DSM 15981] Length = 660 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 201/477 (42%), Positives = 306/477 (64%), Gaps = 11/477 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI + AQ Sbjct: 6 KKPYYITTAIAYASGKPHIGNTYEIVLADSIARYKRAQGCDVFFQTGTDEHGQKIEEKAQ 65 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AGV+ K FVD+ + + + D+++ SYD FIRTT+ H + ++K++ D+GDIYKG Sbjct: 66 AAGVSPKEFVDKAAEEIKRIWDLMNTSYDKFIRTTDADHEAQVQKIFKRLYDQGDIYKGY 125 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ DG+ + V+ +EE YFFR+S Y KL+ + +H Sbjct: 126 YEGMYCTPCESFFTESQL---VDGKCPDCGRE-VKPAKEEAYFFRMSKYAPKLIEHINAH 181 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEFI P+ R+NE+++ F+ GL+DL +SR TF WGI + DP+++ YVW+DALTNY+T Sbjct: 182 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTTFSWGIPVTFDPKHVTYVWLDALTNYITGI 241 Query: 243 GYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GY D GS +F WPADLH+IGKDI+RFH IYWP FL++ + LPK+VF H ++L Sbjct: 242 GY-DCDGGSTEQFKKYWPADLHLIGKDIIRFHTIYWPIFLMALGVELPKQVFGHPWLLQG 300 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GNV+ +++ GVDA+RYF++ E+ DG + + +R+N+DLAN +G Sbjct: 301 DGKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVISWELMVERMNSDLANILG 360 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLV+R++SM K + G++ GA DE + + ++++ M+ + A+ ++ + Sbjct: 361 NLVNRTISMSNKYFGGVVADKGAAEAVDEDLKATVLEAVKKVEAKMEQLRVADAITEIFN 420 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + ++Y D PW L K DR +TVLY E I A LL+ F+P+ + KI Sbjct: 421 IFRRSNKYIDETTPWALAKDEAKKDRLATVLYNLSEAIAIGASLLEPFMPETSGKIL 477 >gi|148273554|ref|YP_001223115.1| methionyl-tRNA synthetase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831484|emb|CAN02445.1| metS [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 525 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 209/484 (43%), Positives = 302/484 (62%), Gaps = 9/484 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E YI+T I Y N PHIGHAY + ADVLAR+HR G D F TGTDEHGQKI + Sbjct: 1 MSRGEPFYITTPIFYVNDVPHIGHAYTEVAADVLARWHRQRGDDTWFLTGTDEHGQKILR 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A T + + D+ + +++ + + +DIS DDFIRTT+ RH ++ +I +++ D G I Sbjct: 61 TATAHDTTPQAWADRLVTESWQPLLEAVDISNDDFIRTTDARHEESVKIFLQRLHDAGFI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHN-PVQWMEEEGYFFRLSAYQDK 175 Y G Y G+Y + E Y ++ +G +GQ A H+ PV+ +EE+ YFFR+S + ++ Sbjct: 121 YTGEYKGYYCVGCEEYKQPSDLLEGTGPFEGQLVCAIHSKPVELLEEKNYFFRMSDFGER 180 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 LL++YE P+FI P RNE++SFV+ GL+DLS+SR +FDWGI IP D +++YVW +AL Sbjct: 181 LLAFYEERPDFIQPESARNEILSFVRRGLEDLSISRSSFDWGIPIPWDESHVVYVWFEAL 240 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+T GY + + + + WPA H++GKDILRFHA+ WPA L++ P++VF HG+ Sbjct: 241 MNYVTAIGYGVDDERFRRR-WPA-THLVGKDILRFHAVIWPAMLMALGEEPPRRVFGHGW 298 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L GEK+SKS I P + + G+DA RY +R IA G+DG + + L R A+LA Sbjct: 299 LLVGGEKMSKSKLTGIVPQTITDTFGIDAFRYHFMRSIAFGQDGSFSWEDLSARYQAELA 358 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 NG GNL SR ++M+ + +DG IP TE+DE +L+V + + IH ALA Sbjct: 359 NGFGNLSSRVIAMVGRYFDGRIPAADGLTEADERVLAVARSAAATADQAIDRLAIHEALA 418 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473 V +LV E++ Y +Q+PW L K + DRA TVL+ V + LA+LL +P K+ Sbjct: 419 AVWTLVDELNGYITSQEPWALAKKDEDRARLETVLHTAVRGLGTLAVLLAPVLPGATAKL 478 Query: 474 FDIL 477 + L Sbjct: 479 WTAL 482 >gi|312870209|ref|ZP_07730340.1| methionine--tRNA ligase [Lactobacillus oris PB013-T2-3] gi|311094232|gb|EFQ52545.1| methionine--tRNA ligase [Lactobacillus oris PB013-T2-3] Length = 674 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 211/519 (40%), Positives = 312/519 (60%), Gaps = 11/519 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ YI+T I YP+ + HIG++Y + D ARF RL G DV F TGTDEHG KI + A Sbjct: 4 QKPTYYITTPIYYPSGKLHIGNSYTTVACDAEARFKRLSGYDVFFLTGTDEHGLKIEQKA 63 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + +VDQ + + + L I+ D FIRTT+ H + +++K D+GDIYKG Sbjct: 64 DKLGMQPQEYVDQMADGIKKLWKTLKITNDKFIRTTDDYHEQAVQKIFQKFLDQGDIYKG 123 Query: 123 CYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDKL 176 Y+GWYS+ DE Y+ + EVY+ +G+ + + VQ ++EE YFF++S Y D L Sbjct: 124 EYTGWYSVDDEEYFTESQLAEVYRDDNGKVIGGKAPSGHEVQLVKEESYFFKMSRYADWL 183 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 + YYE HP+FI P R NE+++ F+K GL+DL+++R +F+WG+K+P+DP++++YVWIDAL Sbjct: 184 MKYYEEHPDFIEPHTRMNEMVNNFLKPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWIDAL 243 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 +NY+T GY D K+WPAD+H++GK+I+RFH IYWP L + LPLPK V HG+ Sbjct: 244 SNYITALGYGSADDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHVIGHGW 303 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNVI P +++ G+DA RY+L+R + G DG + + +VN DLA Sbjct: 304 LTMKDGKMSKSKGNVIYPETLVDRYGLDATRYYLLRAMPFGNDGVFSPEDFVDKVNFDLA 363 Query: 356 NGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K G + T A T D + ++ + E +E M AL Sbjct: 364 NDLGNLLNRTVAMINKYQGGQVQGTNDAQTAFDADLEETAAQAIAEYKEEMDKTHFADAL 423 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 A V LVS ++Y D +PW L K + +A S V+ + +R +A LLQ +P + Sbjct: 424 AAVWKLVSRANKYIDETEPWVLAKDDSKKAELSDVMTHLAKSLRVIAALLQPVMPDAPKE 483 Query: 473 IFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 I L + +E L P + PIFPR Sbjct: 484 ICRQLGLPEEAISLTDLAFNDFPASSQVVAKGTPIFPRL 522 >gi|146085927|ref|XP_001465394.1| methionyl-tRNA synthetase [Leishmania infantum JPCM5] gi|134069492|emb|CAM67815.1| putative methionyl-tRNA synthetase [Leishmania infantum JPCM5] Length = 747 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 209/499 (41%), Positives = 296/499 (59%), Gaps = 17/499 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K+++ + +T I Y NA PHIGH Y +I DVL R+HR+ G +V TGTDEHGQK+A+A Sbjct: 206 KKQKVFFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHGQKVAEA 265 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A GV+ F S F+ ++ + FIRTT H + +WKK+ KGDIY Sbjct: 266 AAKQGVSPMDFTTSVSSEFKQCFKEMNYDMNYFIRTTNPTHEKLVQDIWKKLEAKGDIYL 325 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKL 176 G Y GWYS+ DE++ V G D + + V W+EEE Y FRLSA++++L Sbjct: 326 GKYEGWYSVSDESFLTAQNVADGVDKDGKPCKVSLESGHVVTWVEEENYMFRLSAFRERL 385 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK---TFDWGIKIPDDPQYIMYVWID 233 L Y+ HP I+P RR EVI V+ GL DLS+SRK +W I +P D ++ +YVW+D Sbjct: 386 LKYFHDHPNCIVPEFRRREVIKTVEKGLFDLSISRKRESVMNWSIPVPGDERHCIYVWLD 445 Query: 234 ALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285 AL NY T DG++ WPAD+HV+GKDIL+FHAIYWPAFL+SA LP Sbjct: 446 ALFNYYTGALTRVAADGTETLDEDHHTLNRWPADVHVVGKDILKFHAIYWPAFLMSAELP 505 Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345 LP+++ SHG+ KISKSLGN DP+E +E G+DAL+YFL+RE DG Y Sbjct: 506 LPERLVSHGWWTKDRRKISKSLGNAFDPVEKAKEFGIDALKYFLMRESNFQDDGDYSDKN 565 Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405 + R+N +LA+ +GNLVSR V+ + + +GM P P ++ESD+++++ + + + Sbjct: 566 MVARLNGELADTLGNLVSRCVAPKI-NVNGMWPEPAEYSESDKTLIASLNNLAGTVDHYY 624 Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465 I AL + ++ ++ Y PW+L KT+ R TVLYVT+E +R + LQ Sbjct: 625 CLPDIQHALIAIFDVLRSLNAYVTENAPWKLVKTDTARLGTVLYVTMEGLRICTMFLQPV 684 Query: 466 VPKLANKIFDILFVADENR 484 +P+ A +I D L V + R Sbjct: 685 MPQKAKEIMDALGVPEAAR 703 >gi|313898934|ref|ZP_07832461.1| methionine--tRNA ligase [Clostridium sp. HGF2] gi|312956133|gb|EFR37774.1| methionine--tRNA ligase [Clostridium sp. HGF2] Length = 657 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 204/489 (41%), Positives = 313/489 (64%), Gaps = 13/489 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K ++ YI+TAI Y + +PHIG+ YE+I+ D +AR+ R G DV F TGTDEHGQKI + Sbjct: 6 KNKKPYYITTAITYTSGRPHIGNTYEIILTDAIARYKRQQGYDVFFQTGTDEHGQKIEEK 65 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ AGVT K FVD+ + R D+++ SYD FIRTT+ H + ++KK+ ++GDIYK Sbjct: 66 AKEAGVTPKEFVDKVAGIVRKNFDMMNTSYDYFIRTTDDYHEKQVQKIFKKLYEQGDIYK 125 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y G Y E+++ + ++ DG+ + PV+ EE YFF L Y +L+ + E Sbjct: 126 STYEGLYCTPCESFWTESQL---VDGKCPDCGR-PVEKASEEAYFFNLQKYAPRLIKHIE 181 Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 HPEFI P R+NE+I+ F+K GL+DL +SR +F WGI + DP +++YVWIDAL+NY+T Sbjct: 182 DHPEFIQPESRKNEMINNFLKPGLQDLCVSRTSFKWGIPVDFDPGHVVYVWIDALSNYIT 241 Query: 241 TTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 + G+ + DG+ K+WPAD+H+IGKDILRFH IYWP L++ PLPK+VF H ++ Sbjct: 242 SLGF--DADGNHGELYQKYWPADVHIIGKDILRFHTIYWPIMLMALGEPLPKQVFGHPWL 299 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L K+SKS GN I E++ GVDA+RYF++ E+ +DG D + +R+N+DLAN Sbjct: 300 LVGDGKMSKSKGNAIYADELVHYFGVDAVRYFVLHEMPFAQDGTITWDLVVERINSDLAN 359 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNLV+R++SM K ++G+I P + D+ ++++ + + + M+ + A+ + Sbjct: 360 VLGNLVNRTISMQNKYFNGVISNPLEQEDIDKELIALALDTPKRVEKKMETLHVGEAIDE 419 Query: 417 VISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + +L+ ++Y D PW L K DR +TVLY +E IR A+LL +++P+ A KI Sbjct: 420 IFTLLKRCNKYIDETTPWVLGKDEAKKDRLATVLYNLLECIRFSAVLLSSYMPETAEKIL 479 Query: 475 DILFVADEN 483 + L ++ + Sbjct: 480 EELSTSERD 488 >gi|260102231|ref|ZP_05752468.1| methionine-tRNA ligase [Lactobacillus helveticus DSM 20075] gi|260083972|gb|EEW68092.1| methionine-tRNA ligase [Lactobacillus helveticus DSM 20075] gi|328463921|gb|EGF35439.1| methionyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463] Length = 658 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 206/524 (39%), Positives = 318/524 (60%), Gaps = 18/524 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + IG+AY I AD +AR+ R G D F TGTDEHG KI + Sbjct: 1 MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGYDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + FVD+ + +++ + LDISYD FIRTT++ H + +++K+ KGDIY Sbjct: 61 KAEAQGIKPQEFVDKMAASYKKLWKSLDISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE Y+ + EVYK +G + + V+ ++E YFF++S Y D Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ YY+ HPEFILP R E+++ F+K GL+DLS++R T +WGI +P DP++++YVWID Sbjct: 181 RLVEYYKEHPEFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK + H Sbjct: 241 ALSNYITALGYGSDHDELFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GN + P + G+D LRY+L+ + G DG + + +R+N D Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGIDPLRYYLMHALPFGADGIFTPEDFIERINYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+VSMI + DG + P P + + + + V+ + RE M + + Sbjct: 361 LANDLGNLLNRTVSMINQYQDGQVAPVPVTQDKFGKDLQDTAASVIADYREQMDSLHFSQ 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL + LV+ ++ D PW L K+ D S V+ E +R +AI++ + + A Sbjct: 421 ALDSIWKLVARANKCIDETTPWVLNKEGKKDELSHVMSNLAESLRLIAIMIYPVMTETAP 480 Query: 472 KIFDILFVA-----DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 K+F+ L + +N F K + + PIFPR Sbjct: 481 KMFEQLGLNWDDEDQKNLAFNDFGWNTK----VVEKPKPIFPRL 520 >gi|254302880|ref|ZP_04970238.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323072|gb|EDK88322.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 636 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 213/514 (41%), Positives = 317/514 (61%), Gaps = 13/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++ST I Y N PH+G AY I ADV+ R+++ G+D F TG DEHGQK+ +AA+ Sbjct: 2 KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFMTGLDEHGQKVEQAAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + + D+ + NF++M L+I YDDFIRTTE RH + + ++ KGDIYKG Sbjct: 62 QNGYTPQAWTDKMTPNFKNMWAALEIKYDDFIRTTEDRHKKAVKRILDMVNAKGDIYKGE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + E ++ ++++ G++ + + ++EE YFF++S Y D LL + E H Sbjct: 122 YEGKYCVSCETFFPENQL-NGSNKCPDCGKELTI--LKEESYFFKMSKYADALLKHIEEH 178 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FILP RRNEVISF+K GL+DLS+SR TF WGI I P +I YVW DALTNYLT+ G Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAG 238 Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 + +N D KFW +H+IGKDI+RFHAI WP LLSA + LP + +HG+ +GE Sbjct: 239 F-ENNDEKFNKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV++P + I++ GVDA RY+L+RE G DG Y G+ R+N+DLAN +GNL Sbjct: 298 KMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R++ M K ++ +I + A DE I S+ + V++++ + M RAL + + Sbjct: 358 LNRTLGMYKKYFNDVIVSSSASEAIDEEIKSMFNEVIKDVEKYMYLFEFSRALETIWRFI 417 Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S +++Y D PW L K + DR + V+ + E + ++A L+ ++P A KI + L + Sbjct: 418 SRLNKYIDETMPWALAKDESKKDRLAAVMNILCEGLYKIAFLIAPYMPMSAQKISNQLGI 477 Query: 480 ADENRCFQSLDQR----LKPGFMLHKTFDPIFPR 509 + + D + K G L + PIFPR Sbjct: 478 DKDITDVKFDDVKEWNIFKEGHKLGEA-SPIFPR 510 >gi|310778457|ref|YP_003966790.1| methionyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] gi|309747780|gb|ADO82442.1| methionyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] Length = 637 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 217/512 (42%), Positives = 308/512 (60%), Gaps = 13/512 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y N PH+G AY I ADV+AR+ + G DV F TGTDEHGQK+ + A+ G Sbjct: 5 FYVTTPIYYVNGDPHVGSAYTTIAADVIARYKKTMGYDVFFLTGTDEHGQKVEETAREKG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + + D+ + F DM ++L++S+DDFIRTT+ RH + KK+ +KGDIYKG Y G Sbjct: 65 FTPQEWTDKMAPRFEDMWNLLNVSHDDFIRTTQIRHKKAVTKILKKVYEKGDIYKGEYEG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y + E Y ++++ G +G + V ++EE YFF++S YQD LL + E HP+F Sbjct: 125 KYCVSCETYVPENQIV-GENGCPDCGKDLRV--VKEESYFFKMSKYQDALLEHIEKHPDF 181 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 ILP R+NEVISFVK GL+DLS+SR TF+WGI I P +I YVW DALTNYLT GY + Sbjct: 182 ILPHSRKNEVISFVKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTAVGYEN 241 Query: 247 NPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 N D + KFW +H++GKDILRFHAI WP LL+A LP K+ +HG+ +GEK+S Sbjct: 242 NLDMFQ-KFWNDGEVVHLLGKDILRFHAIIWPCMLLAAEEKLPDKIVAHGWWTVEGEKMS 300 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNVIDP E G D RYFL+RE+ G DG Y + R+NADLAN +GNL++R Sbjct: 301 KSKGNVIDPQAETERYGRDPFRYFLMREVHFGNDGDYSTTSMVNRINADLANDLGNLLNR 360 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 ++ M K ++ + D+ I + L+ + ++M +AL + +S + Sbjct: 361 TLGMYKKYFNSTVVKGTGHQIYDDQIKELWKETLESVEKSMSKLEFSKALEAIWKFISRM 420 Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF---- 478 ++Y D PW L K R + V+ VE + ++A+L+ ++P+ A KI++ L Sbjct: 421 NKYIDETMPWALAKDEDKKPRLAVVMNNLVEALYKVAVLVYPYMPESAQKIWEQLGFSED 480 Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + D S + +K G L + PIFPR Sbjct: 481 IKDAKLSVVSPWEVIKEGHNLGEA-KPIFPRI 511 >gi|290891337|ref|ZP_06554398.1| hypothetical protein AWRIB429_1788 [Oenococcus oeni AWRIB429] gi|290478983|gb|EFD87646.1| hypothetical protein AWRIB429_1788 [Oenococcus oeni AWRIB429] Length = 675 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 207/525 (39%), Positives = 315/525 (60%), Gaps = 16/525 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ + YI+T I YP+ + +G+ Y ++AD +ARFHR G DV F TGTDEHG KI + Sbjct: 1 MTKKNRFYITTPIYYPSGKLQLGNTYTTVLADSVARFHRALGEDVFFLTGTDEHGLKIQE 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG + ++D+ + + + + +++ISYD FIRTT+ H + ++KK D+GDIY Sbjct: 61 KAEAAGKSEMEYLDEMAVSIKKLWKLMNISYDKFIRTTDAYHERVVQHIFKKFMDEGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 KG Y+GWYS+ DE Y+ + EVY+ DG+ + + VQ ++EE YFF++S Y D Sbjct: 121 KGNYTGWYSVSDEEYFTESQLAEVYRDKDGKVIGGKAPSGHEVQLVKEETYFFKMSKYSD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 LL YY HPEF+ P R NE+IS F+K GL+DL+L+R +F+WGI +P D ++++YVWID Sbjct: 181 WLLQYYHDHPEFLQPESRMNEMISNFIKPGLEDLALTRTSFNWGIPVPGDEKHVIYVWID 240 Query: 234 ALTNYLTTTGY------LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP 287 AL+NY+T GY D+ KFWPA+L ++GK+I+RFH IYWP L + LPLP Sbjct: 241 ALSNYITALGYDPELGDFDHQPELFKKFWPANLQLVGKEIVRFHTIYWPIMLHALGLPLP 300 Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +V HG+++ K K+SKS GNV+ P + G+DA+RY+L+R + G DG + + Sbjct: 301 GEVLGHGWLVMKNGKMSKSKGNVVYPETLESRYGLDAVRYYLLRSMPFGNDGVFSPEDFV 360 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 RVN DLAN +GNL++R++SMI + +G+IP G D + S+ ++ ++ M+ Sbjct: 361 NRVNFDLANDLGNLLNRTISMINRYDNGLIPKLGKLLPEDRELEETASQAVENFKDEMEK 420 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAF 465 AL V +L+ ++Y D +PW L K N RA + +R + LLQ Sbjct: 421 VHTADALEAVWTLIRRTNKYIDETEPWVLDK-NKQRAELDDAMAHLAASLRVVGSLLQPV 479 Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + KIFD L + + + G + + P+FPR Sbjct: 480 LTQAPKKIFDQLGLPEVEPISNLNFADIPTGVKVVERPTPLFPRL 524 >gi|154149034|ref|YP_001406307.1| methionyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381] gi|153805043|gb|ABS52050.1| methionyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381] Length = 638 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 204/477 (42%), Positives = 302/477 (63%), Gaps = 12/477 (2%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K +I+T I Y N PHIGHAY II D LARF+RL G + F TGTDEHGQKI +AA+ Sbjct: 2 KKFITTPIYYVNDIPHIGHAYTTIICDTLARFYRLQGYETFFLTGTDEHGQKIEEAAKKH 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G + K++ D S FR + D DISYD FIRTT++ H T + ++ + GDIYKG Y Sbjct: 62 GTSPKIYADAVSAKFRSLWDYFDISYDHFIRTTDEYHIKTAQNAFEIMFANGDIYKGEYE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G+Y + E+++ + ++ DG+Y Q ++EE YFFRLS Y D+LL +YE Sbjct: 122 GYYCVSCESFFPETQL---IDGEYCPDCGKKTQIIKEESYFFRLSKYTDRLLKWYEDEEN 178 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTT 242 ILP ++NEVISFVKSGLKDLS++R +FDWGIK+P+ DP+++MYVW+DAL NYL+ Sbjct: 179 CILPRGKKNEVISFVKSGLKDLSITRTSFDWGIKLPEKLNDPKHVMYVWLDALINYLSAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY N G K FW +H++GKDILRFHA+YWPAFL+S LPLPK + +HG+ G+K Sbjct: 239 GYTQN--GEKMDFWNDTIHIVGKDILRFHAVYWPAFLMSLGLPLPKHIAAHGWWTRDGKK 296 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNV++P EV + G++ RYFL+RE+ G+DG + + + R+N++LAN +GNL+ Sbjct: 297 MSKSIGNVVNPKEVADAYGLEQFRYFLLREVPFGQDGDFSQKAIISRINSELANDLGNLL 356 Query: 363 SRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 +R + M K + I + +DE ++ L+ EN++ R L ++ + Sbjct: 357 NRIIGMSEKYSNFKINSKDVLKFYADE--MNETKNYLKNAVENLEEVATSRYLEELFKAL 414 Query: 422 SEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + +PW++ K ++A ++ + ++ ++A+LL +P+ A KI L Sbjct: 415 NLANSSITKYEPWKMIKNGENEKALALVALVANILAKVAVLLSPAMPQTAKKIATAL 471 >gi|322491559|emb|CBZ26831.1| putative methionyl-tRNA synthetase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 747 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 209/500 (41%), Positives = 296/500 (59%), Gaps = 17/500 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K+ + + +T I Y NA PHIGH Y +I DVL R+HR+ G +V TGTDEHGQK+A+A Sbjct: 206 KKGKVFFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHGQKVAEA 265 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A GV+ F S F+ ++ + FIRTT H + +WKK+ KGDIY Sbjct: 266 AAKQGVSPMDFTTSVSSEFKQCFTEMNYDMNYFIRTTNATHEKLVQDIWKKLEAKGDIYL 325 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKL 176 G Y GWYS+ DE++ V G D + + V W+EEE Y FRLSA++++L Sbjct: 326 GKYEGWYSVSDESFLTAQNVADGVDKDGKPCKVSLESGHVVTWVEEENYMFRLSAFRERL 385 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK---TFDWGIKIPDDPQYIMYVWID 233 L Y+ HP I+P RR EVI V+ GL DLS+SRK +W I +P D ++ +YVW+D Sbjct: 386 LKYFHEHPNCIVPEFRRREVIKTVEKGLFDLSISRKRESVMNWSIPVPGDERHCIYVWLD 445 Query: 234 ALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285 AL NY T DG++ WPAD+HV+GKDIL+FHAIYWPAFL+SA LP Sbjct: 446 ALFNYYTGALTRVAADGTETLDEDHHTLNRWPADVHVVGKDILKFHAIYWPAFLMSAELP 505 Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345 LP+++ SHG+ +KISKSLGN DP+E +E G+DAL+YFL+RE DG Y Sbjct: 506 LPERLVSHGWWTKDHKKISKSLGNAFDPVEKAKEFGIDALKYFLMRESNFQDDGDYSDRN 565 Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405 + R+N +LA+ +GNLVSR V+ + + +GM P P ++ESD+++++ + + + Sbjct: 566 MVARLNGELADTLGNLVSRCVAPKI-NVNGMWPEPAEYSESDKTLIASLNNLAGTVDHYY 624 Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465 I AL + ++ ++ Y PW+L KT+ R TVLYVT+E +R + LQ Sbjct: 625 CLPDIQHALIAIFDVLRSLNAYVTENAPWKLVKTDTARLGTVLYVTMEGLRICTMFLQPV 684 Query: 466 VPKLANKIFDILFVADENRC 485 +P+ A +I D L V + R Sbjct: 685 MPQKAKEIMDALGVPEAARA 704 >gi|302380917|ref|ZP_07269379.1| methionine--tRNA ligase [Finegoldia magna ACS-171-V-Col3] gi|302311295|gb|EFK93314.1| methionine--tRNA ligase [Finegoldia magna ACS-171-V-Col3] Length = 666 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 201/475 (42%), Positives = 310/475 (65%), Gaps = 8/475 (1%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E++ YI+T I YP++ H+GH Y IIAD L +F ++ G DV TTGTDEHGQK+ + Sbjct: 3 EEKKSYYITTPIYYPSSNLHLGHTYTTIIADTLKKFKKIQGYDVFLTTGTDEHGQKLYEK 62 Query: 62 AQ--NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ N G ++D ++ +D+ LDI D F+R+T+K H + +++K+ DKGDI Sbjct: 63 AKEKNMGDNPLNYIDPIVQSAKDLWKKLDIDIDSFVRSTDKVHEKNVQEIFQKLYDKGDI 122 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 YK Y G Y + EA++ + ++ DG+ + + V + EEE YFFRLS Y+D++L Sbjct: 123 YKSTYKGHYCVDCEAFWTESQL---KDGKCPDCGRD-VHYHEEESYFFRLSKYKDRILQL 178 Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 Y+ +P+F+ P R+NE+++ F+ L+DLS+SR +FDWG+K+P D ++I+YVWIDAL+ Y Sbjct: 179 YKDNPDFLKPESRKNEMVNNFLSGELEDLSVSRTSFDWGVKVPFDDKHIIYVWIDALSCY 238 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 LT GY + + KFWP D+H++GK+I+RFH I WPA L++ +LPLPK+VF+HG+IL Sbjct: 239 LTGIGYGQDEELFN-KFWPCDIHLVGKEIVRFHTIIWPALLMALDLPLPKRVFAHGWILF 297 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 +K+SKS GNV P +I+ GVDAL+Y+++R+ G DG + + R N+DL N + Sbjct: 298 NEDKMSKSKGNVYYPEPIIDLYGVDALKYYILRDFTFGNDGNFTTERFMNRFNSDLVNDL 357 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNLVSRSVSM+ K +DG+I P + D+S++SV +++ E ++ AL ++ Sbjct: 358 GNLVSRSVSMVEKYFDGVITQPNDNNDIDKSLISVVEGCQEKVEELLEELDFSNALEEIW 417 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +V ++Y D PW L K +P+R TVLY ++ IR + IL F+ + +NKI Sbjct: 418 KVVRRANKYIDETTPWILIKEDPERLKTVLYNLMDAIRVICILTSPFITETSNKI 472 >gi|218132714|ref|ZP_03461518.1| hypothetical protein BACPEC_00575 [Bacteroides pectinophilus ATCC 43243] gi|217992440|gb|EEC58443.1| hypothetical protein BACPEC_00575 [Bacteroides pectinophilus ATCC 43243] Length = 676 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 205/479 (42%), Positives = 310/479 (64%), Gaps = 9/479 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M++++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI Sbjct: 27 MEDKKKYYITTAIAYTSGKPHIGNTYEIVLADSIARYKRQQGYDVFFQTGTDEHGQKIEL 86 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG++ + FVD S + + D++D SY+ FIRTT+K H + ++KK+ D+GDIY Sbjct: 87 KAEEAGISPQEFVDNVSGEIKRIWDLMDTSYNKFIRTTDKYHEKQVQKIFKKLYDQGDIY 146 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y E+++ ++ DG+ + P Q EE YF +L Y +KL+ + Sbjct: 147 KGFYEGMYCTPCESFFTASQL---VDGKCPDCGR-PCQPAREEAYFLKLGKYTNKLIEHI 202 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 ESHPEFI P R+NE+++ F+K+GL+DL +SR +F WGI + D ++++YVW+DALTNY+ Sbjct: 203 ESHPEFIQPESRKNEMMNNFIKAGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYI 262 Query: 240 TTTGY-LD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 T GY +D N D + K+WPADLH+IGKDILRFH IYWP L++ LPLPK++F H ++L Sbjct: 263 TGLGYDVDGNSDENFNKYWPADLHLIGKDILRFHTIYWPIMLMALGLPLPKQIFGHPWLL 322 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 K+SKS GNVI ++++ GVDA+RYF++ E+ DG + + +R+N+DLAN Sbjct: 323 QGDGKMSKSKGNVIYADDLVDMFGVDAVRYFVLHEMPFENDGVITWELMVERMNSDLANT 382 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 +GNLV+R+++M K + G + A T+ DE + V + I ++M + A+ ++ Sbjct: 383 LGNLVNRTIAMSNKYFGGDVNDTSATTDFDEDLKRVVTGTKALIDKDMDKLRVADAITEI 442 Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +L ++Y D PW L K + D + VLY VE I A LL +++P+ A +I Sbjct: 443 FTLFKRCNKYIDETMPWALAKDESKQDELAHVLYNLVESITIGANLLTSYMPQTAGRIL 501 >gi|313893365|ref|ZP_07826939.1| methionine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] gi|313442134|gb|EFR60552.1| methionine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] Length = 484 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 197/464 (42%), Positives = 294/464 (63%), Gaps = 7/464 (1%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 HIGH Y +AD +ARF RL G DV F TG+DEHGQKI +AA G+T + F Sbjct: 2 HIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAAAAEGITPLEYTTNIVNGF 61 Query: 81 RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140 + + + + IS DDFIRTT++RH + L+ K +KGDIYK Y GWY DE ++ + + Sbjct: 62 KALWEKMHISNDDFIRTTDERHEKVVQELFTKAYEKGDIYKAEYEGWYCTPDETFWTEQK 121 Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200 + G + + PV+ ++EE YFF+L Y D+ L + E +P+FI P RRNE+I FV Sbjct: 122 L--GPNHTCPDCGR-PVERVKEESYFFKLGKYTDQWLKFIEENPDFIQPESRRNEMIQFV 178 Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 K GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++ D K+WPADL Sbjct: 179 KQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISALSPFDGDGELYKKYWPADL 238 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 H++GK+I+RFH I WP L+S LPLPKKVF HG+++ G K+SKSLGNVIDPI +I+ Sbjct: 239 HLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTKMSKSLGNVIDPIPLIDTY 298 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 G D+LRY+L+ EI G DG + ++NADL+N +GNL++R+++MI K +DG+I Sbjct: 299 GADSLRYYLLSEITLGNDGNFTLPNFVTKINADLSNDLGNLLNRTIAMIEKYHDGVITKC 358 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439 + D + ++ + +++ M+N +++A+ V + + +++Y D PW L K+ Sbjct: 359 DDMDDLDRDVSALAVQTVKDFEAAMENMELNKAIKSVWAFIGRMNKYIDETMPWVLAKSE 418 Query: 440 ---NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 + R + +Y E +R +AIL+ +P A KI+D L +A Sbjct: 419 DANDKARLQSAMYHLAEALRIIAILVSPVIPVGAPKIWDQLGLA 462 >gi|237740543|ref|ZP_04571024.1| methionyl-tRNA synthetase [Fusobacterium sp. 2_1_31] gi|229422560|gb|EEO37607.1| methionyl-tRNA synthetase [Fusobacterium sp. 2_1_31] Length = 637 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 210/514 (40%), Positives = 316/514 (61%), Gaps = 13/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++ST I Y N PH+G AY I ADV+ R+++ G+D F TG DEHGQK+ +AA+ Sbjct: 2 KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKSMGMDTHFVTGLDEHGQKVEQAAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + + D+ + NF++M L+I YDDFIRTTE+RH + + + + +KGDIYKG Sbjct: 62 QHGFTPQAWTDKMTPNFKNMWAALNIKYDDFIRTTEERHKKAVKKILEIVHEKGDIYKGE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + E ++ ++++ G++ + V ++EE YFF++S Y D LL + + H Sbjct: 122 YEGKYCVSCETFFPENQL-NGSNKCPDCGKELTV--LKEESYFFKMSKYADALLKHIDEH 178 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FILP RRNEVISF+K GL+DLS+SR TF WGI I P +I YVW DALTNY+T+ G Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIEFAPGHITYVWFDALTNYITSAG 238 Query: 244 YLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 + +N D KFW +H+IGKDI+RFHAI WP LLSA + LP + +HG+ +GE Sbjct: 239 F-ENDDKKFDKFWNDARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP I++ GVDA RY+L+RE G DG Y G+ R+N+DLAN +GNL Sbjct: 298 KMSKSKGNVVDPYNEIKKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R++ M K ++G++ E D+ I ++ ++++ + M RAL + + Sbjct: 358 LNRTLGMYKKYFNGVVVASSTSEEIDDVIKAMFDETIKDVEKYMYLFEFSRALETIWKFI 417 Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S +++Y D PW L K T R + V+ + E + ++A L+ ++P+ A KI + L + Sbjct: 418 SRLNKYIDETMPWTLAKDETKKSRLAAVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477 Query: 480 ADENRCFQSLDQR----LKPGFMLHKTFDPIFPR 509 + + D + K G L + PIFPR Sbjct: 478 DKDITSLKFDDIKEWNIFKEGHQLGEA-SPIFPR 510 >gi|157868928|ref|XP_001683016.1| methionyl-tRNA synthetase [Leishmania major strain Friedlin] gi|68223899|emb|CAJ04288.1| putative methionyl-tRNA synthetase [Leishmania major strain Friedlin] Length = 747 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 208/499 (41%), Positives = 297/499 (59%), Gaps = 17/499 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K+++ + +T I Y NA PHIGH Y +I DVL R+HR+ G +V TGTDEHGQK+A+A Sbjct: 206 KKQKVFFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHGQKVAEA 265 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A GV+ F S F+ ++ + FIRTT H + +WKK++ KGDIY Sbjct: 266 AAKQGVSPMDFTTSVSSEFKQCFQEMNYDMNYFIRTTNPTHEKLVQDIWKKLAAKGDIYL 325 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD-----GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 G Y GWYS+ DE++ V G D + + V W+EEE Y FRLSA++++L Sbjct: 326 GKYEGWYSVSDESFLTAQNVADGVDRDGKPCKVSLESGHVVTWVEEENYMFRLSAFRERL 385 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK---TFDWGIKIPDDPQYIMYVWID 233 L Y+ HP I+P RR EVI V+ GL DLS+SRK +W I +P D ++ +YVW+D Sbjct: 386 LKYFHDHPNCIVPEFRRREVIKTVEKGLFDLSISRKRESVMNWSIPVPGDERHCIYVWLD 445 Query: 234 ALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285 AL NY T DG++ WPAD+HV+GKDIL+FHAIYWPAFL+SA LP Sbjct: 446 ALFNYYTGALTRVATDGTETLDEDHHALNRWPADVHVVGKDILKFHAIYWPAFLMSAELP 505 Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345 LP+++ SHG+ +KISKSLGN DP+E +E G+DAL+YFL+RE DG Y Sbjct: 506 LPERLVSHGWWTKDHKKISKSLGNAFDPVEKAKEFGIDALKYFLMRESNFQDDGDYSDKN 565 Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405 + R+N +LA+ +GNLVSR V+ + + +GM P P ++ESD+++++ + + + Sbjct: 566 MVARLNGELADTLGNLVSRCVAPKI-NVNGMWPEPAEYSESDKTLIASLNNLAGTVDHYY 624 Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465 I AL + ++ ++ Y PW+L K + R TVLYVT+E +R + LQ Sbjct: 625 CLPDIQHALIAIFDVLRSLNAYVTENAPWKLVKMDTARLGTVLYVTMEGLRICTMFLQPV 684 Query: 466 VPKLANKIFDILFVADENR 484 +P+ A +I D L V + R Sbjct: 685 MPQKAKEIMDALGVPEAAR 703 >gi|294785169|ref|ZP_06750457.1| methionine--tRNA ligase [Fusobacterium sp. 3_1_27] gi|294486883|gb|EFG34245.1| methionine--tRNA ligase [Fusobacterium sp. 3_1_27] Length = 636 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 212/514 (41%), Positives = 317/514 (61%), Gaps = 13/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++ST I Y N PH+G AY I ADV+ R+++ G+D F TG DEHGQK+ +AA+ Sbjct: 2 KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFMTGLDEHGQKVEQAAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + + D+ + NF++M LDI YDDFIRTTE RH + + ++ KGDIYKG Sbjct: 62 QNGYTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDMVNAKGDIYKGE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + E ++ ++++ G++ + ++ ++EE YFF++S Y D LL + E H Sbjct: 122 YEGKYCISCETFFPENQL-NGSNKCPDCGKE--LRVLKEESYFFKMSKYADALLKHIEEH 178 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FILP RRNEVISF+K GL+DLS+SR TF WGI I P +I YVW DALTNYLT+ G Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAG 238 Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 + +N D KFW +H+IGKDI+RFHAI WP LLSA + LP + +HG+ +GE Sbjct: 239 F-ENDDKKFDKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV++P + I++ GVDA RY+L+RE G DG Y G+ R+N+DLAN +GNL Sbjct: 298 KMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R++ M K ++G+I D+ I ++ +++++ + M RAL + + Sbjct: 358 LNRTLGMYKKYFNGVIVASSTSEPIDDEIKTMFDDIIKDVEKYMYLFEFSRALETIWKFI 417 Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S +++Y D PW L K R +TV+ + E + ++A L+ ++P+ A KI + L + Sbjct: 418 SRLNKYIDETMPWSLAKDEAKKGRLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477 Query: 480 ADE--NRCFQSLDQR--LKPGFMLHKTFDPIFPR 509 + N F + + K G L + PIFPR Sbjct: 478 DKDITNVKFDDIKEWNIFKEGHKLGEA-SPIFPR 510 >gi|282883266|ref|ZP_06291864.1| methionine--tRNA ligase [Peptoniphilus lacrimalis 315-B] gi|281296896|gb|EFA89394.1| methionine--tRNA ligase [Peptoniphilus lacrimalis 315-B] Length = 653 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 214/513 (41%), Positives = 315/513 (61%), Gaps = 11/513 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ Y++T I YP+ HIGH Y + AD + RF L G +V FTTGTDEHGQKIA AQ Sbjct: 2 KKNFYLTTPIYYPSDNLHIGHTYCTVAADCIKRFKELQGYNVFFTTGTDEHGQKIATKAQ 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+ K +VD+ N + + + LDI YD FIR+T+ +H + L+KK+ DKGDIYKG Sbjct: 62 EAGMEPKAYVDKIVANIKKLWESLDIQYDAFIRSTDAQHEKDVQDLFKKLYDKGDIYKGE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G+Y E+++ +V D Q +EE YFFRLS Y+DKLL ++ Sbjct: 122 YEGYYCTPCESFWTQAQV---GDDHACPDCGRVTQLTKEESYFFRLSKYKDKLLDLLNNN 178 Query: 184 PEFILPIERRNEVI-SFVKS--GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 EF P R+NE+I +F++S GL+DLS+SR + WG+++P D ++++YVWIDAL YL+ Sbjct: 179 EEFTEPAFRKNELIKNFIESAEGLEDLSVSRSSLTWGVQVPFDNKHVIYVWIDALLCYLS 238 Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 + D K +FWPAD+H++GK+I RFHA+ WPA L++ +LPLPKK+F HG+IL Sbjct: 239 AIEF--GTDKEKFNEFWPADVHLVGKEIFRFHALIWPALLMALDLPLPKKIFGHGWILFD 296 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 +K+SKS GNV+ P +I+ GVDAL+YFL+RE + G DG + K+ +R+N+DLAN +G Sbjct: 297 NDKMSKSKGNVVYPEPIIKLYGVDALKYFLLREFSFGSDGSFTKEKFMQRLNSDLANDLG 356 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL+SR+VSMI K +G+I P E D+ + ++ V ++ E M++ + AL ++ Sbjct: 357 NLLSRTVSMITKYNNGIIEKPKIEEEIDKDLENMAISVKAKVEEAMEHFKFNVALEEIWK 416 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L+ ++Y D PW L K N DR +TVLY E +R +++L+ F+ + +I L Sbjct: 417 LIRRSNKYVDETTPWILAKDEKNKDRLNTVLYNLAESLRIISVLINPFITNTSKEIIRQL 476 Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + ++ S L P IFPR Sbjct: 477 GLEEKVDWESSQKWGLIPNATKVNKGQIIFPRL 509 >gi|260588948|ref|ZP_05854861.1| methionine--tRNA ligase [Blautia hansenii DSM 20583] gi|260540727|gb|EEX21296.1| methionine--tRNA ligase [Blautia hansenii DSM 20583] Length = 661 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 204/479 (42%), Positives = 304/479 (63%), Gaps = 13/479 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++K YI+TAIAY + +PHIG+ YE I+AD +ARF R G DV F TGTDEHGQKI A Sbjct: 11 DKKKYYITTAIAYTSGKPHIGNTYEAILADSIARFKRQQGYDVFFQTGTDEHGQKIELKA 70 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AGVT K FVD + + + D+++ SYD FIRTT+ H + ++KK+ D+GDIYKG Sbjct: 71 AEAGVTCKEFVDNVAGEIKSIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYKG 130 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y E+++ + ++ DG+ + PV +EE YFFR+S Y +L+ + + Sbjct: 131 YYEGMYCTPCESFFTESQL---VDGKCPDCGR-PVTPAKEEAYFFRMSKYAQRLIDHINT 186 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+T Sbjct: 187 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 246 Query: 242 TGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 GY + DG K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H ++L Sbjct: 247 IGY--DCDGENTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLL 304 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 K+SKS GNV+ ++++ GVDA+RYF++ E+ DG + + +R+N++LAN Sbjct: 305 QGDGKMSKSKGNVLYADQLVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSELANT 364 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 +GNLV+R++SM K + G + DE + +V ++ M+ + A+ ++ Sbjct: 365 LGNLVNRTISMSNKYFGGEVKNTNVCEPVDEELKAVVLGTKAKVAAKMEELRVADAITEI 424 Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +L ++Y D PW L K DR +TVLY VE I A LL++F+P+ KI Sbjct: 425 FTLFKRCNKYIDETMPWALAKDEDKKDRLATVLYNLVEGICIGASLLESFMPETTGKIL 483 >gi|116622455|ref|YP_824611.1| methionyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076] gi|116225617|gb|ABJ84326.1| methionyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076] Length = 641 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 211/512 (41%), Positives = 305/512 (59%), Gaps = 26/512 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K Y++T + Y NA PHIGH Y + A+ +ARF R+ G D + TGTDEHGQK+ ++A+ A Sbjct: 2 KYYLTTPLYYVNAAPHIGHTYTTMAAETIARFKRMQGYDAVMFTGTDEHGQKVERSAEAA 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T + F D +R F+ + L+I D IRTT+ RHH + L++ D G IYKG YS Sbjct: 62 GKTPQEFTDTIAREFQQQWEKLNIRVDRTIRTTDPRHHKVVQRLFQMCMDNGYIYKGSYS 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y + DE Y ND + G + + EE YFF+LSA+ +KLL YES P+ Sbjct: 122 GQYCVYDELYANDAK-----PGDPCPICGRITETVTEENYFFKLSAFTEKLLELYESQPD 176 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RRNEVISFVK GL DLS+SR T WGI +P + ++ YVW DAL Y++ + Sbjct: 177 FIQPEARRNEVISFVKQGLNDLSISRTTIKWGIPLPVEGNHVFYVWFDALIGYMSA---V 233 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D D WPADLH++GK+I RFHA++WPAFL++ +PLPK++ +HG++L + +K+SK Sbjct: 234 DGED-----LWPADLHLMGKEITRFHAVFWPAFLMAGGVPLPKRIVAHGWLLFENDKMSK 288 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S GN++ + + +G DALRYFL+REI G+DG + D L R N+DLANG+GNL SR+ Sbjct: 289 SRGNIVRSEPIRQVMGADALRYFLLREIVFGQDGSFSYDALIGRYNSDLANGLGNLASRT 348 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 ++MI + G +P SD I + ++ ++ ++E + L V L+S VD Sbjct: 349 LTMINQYRGGAVP-----EGSDAEIAGIANQTIRTVQETFDRFEFSKGLEAVWGLISAVD 403 Query: 426 RYFDAQKPWELKKTNPDRA----STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++ PW+L + N + ST LY E +R LL +P+ A KI+ L + + Sbjct: 404 KFIVQNAPWKLARQNDQESQTLLSTTLYTAAEALRVATALLSPVLPQSAPKIWAQLGLPE 463 Query: 482 --ENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 E F +L+ L+PG + + +FPR Sbjct: 464 SIEAVRFATLEWGSLQPGQKIGEIAG-VFPRI 494 >gi|164688857|ref|ZP_02212885.1| hypothetical protein CLOBAR_02505 [Clostridium bartlettii DSM 16795] gi|164602061|gb|EDQ95526.1| hypothetical protein CLOBAR_02505 [Clostridium bartlettii DSM 16795] Length = 648 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 199/482 (41%), Positives = 294/482 (60%), Gaps = 7/482 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+T I YP+ + HIGH Y + D +ARF R G DV F TGTDEHG+KI K A+ Sbjct: 3 KETFYITTPIYYPSGRLHIGHTYTTVATDAIARFKRFCGYDVRFLTGTDEHGEKIQKKAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T ++D + + + +DISYDDFIRTTE RH + ++ K+ ++GDIYKG Sbjct: 63 EAGMTEMEYLDGMIADIKKLWKTMDISYDDFIRTTEPRHTKIIQKIFTKLYEQGDIYKGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ DG +EE YFF+LS Y+D++ ++ + Sbjct: 123 YEGRYCTPCESFWTESQL---VDGDKCPDCGRETYVAKEEAYFFKLSKYEDRIKELFK-N 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P + P R NE+I+ F++ GL+DL ++R TFDWGIK+P D ++++YVW+DAL NY+T Sbjct: 179 PNYCFPEARANEMIANFLEPGLEDLCVTRTTFDWGIKVPFDEKHVIYVWVDALCNYITAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY+ D K+WPA++ V+GK+I+RFH I WPA L++ +LP+ K+VF HG+IL +K Sbjct: 239 GYMSEDDSLFKKYWPANIQVVGKEIIRFHTIIWPALLMALDLPVSKQVFGHGWILFANDK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GN++ P ++IE G+D L+Y+L+RE A G+DG Y R+N DLAN +GNLV Sbjct: 299 MSKSKGNIVYPEQMIERYGIDTLKYYLLREFAFGQDGSYTHRNFITRINTDLANDLGNLV 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+++M+ K G+IP P TE DE++ + + E M H AL V L+ Sbjct: 359 SRTIAMVEKYNGGIIPEPKVATEFDEALKQQAAESRRIFEEQMNKMQFHEALEGVWKLIR 418 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++Y D PW L K + D TVLY E IR + L+ + A KI+ + + Sbjct: 419 RTNKYIDETAPWVLAKDESKKDVLDTVLYNLCESIRIFSTLINPIMNTTAKKIYAQMGIE 478 Query: 481 DE 482 E Sbjct: 479 GE 480 >gi|269928561|ref|YP_003320882.1| methionyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] gi|269787918|gb|ACZ40060.1| methionyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] Length = 525 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 219/524 (41%), Positives = 308/524 (58%), Gaps = 23/524 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R + YI+T+I Y NA PH+GHA E ++AD AR+HRL G D F TGTDE+ AA+ Sbjct: 6 RHRFYITTSIPYVNAAPHLGHALEYVLADAFARYHRLTGDDTRFLTGTDENSLTNVLAAE 65 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDIYKG 122 G+ VD+N+ FR + + LDIS DDFIRT E RH + + LW+ + GDI K Sbjct: 66 REGIPVADLVDRNAEAFRRLTEYLDISNDDFIRTAAEPRHIEGAQKLWEACARAGDIDKR 125 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 YSG Y + E +Y ++E G ++ H P++ +EEE YFFRLS YQD L +S Sbjct: 126 YYSGLYCVLGEQFYTEEEAPDGLCPEH----HIPLELVEEENYFFRLSRYQDALARAIDS 181 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYL 239 I+P RRNEV +F+ GL+D+S+SR + WGI +P DP +MYVW DAL NY+ Sbjct: 182 EALRIIPETRRNEVRAFIARGLEDVSISRTRARARGWGIPVPGDPDQVMYVWFDALANYI 241 Query: 240 TTTGYLDNPDGSKAKFW---PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 T GY + D + ++W P +HVIGK ILRFHA+YWPA L+SA PLP + HG++ Sbjct: 242 TALGYAHDADLYR-RYWVENPHRVHVIGKGILRFHAVYWPAMLMSAGEPLPTTIVVHGYL 300 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 GEK+SKSLGNV+DP E+ G DA+RY+++ E+ +D Y + L++R NADLAN Sbjct: 301 TVGGEKMSKSLGNVVDPAELTARYGADAVRYWMLLEVPPTQDADYTDEKLERRYNADLAN 360 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALA 415 +GNL++R+VSMI + G++P PG +D+ + +V + + I E M QN ALA Sbjct: 361 DLGNLLNRTVSMIRRYRAGLVPAPGEPVTTDQDLEAVAANLPGAIAEAMGQNFDPQTALA 420 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPD-------RASTVLYVTVEVIRQLAILLQAFVPK 468 + LV +RY + PW L + R T LY E +R +A L+ F+P Sbjct: 421 AIWDLVVRANRYVEETAPWSLARAERSGDAAATARLDTALYHLAEALRIIAQALRPFLPD 480 Query: 469 LANKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 A +I + + VA E + + +L PG + + PIFPR Sbjct: 481 TAKRIAEQIGVALETPSWPAALTWGQLPPGTQVSEP-RPIFPRI 523 >gi|255657488|ref|ZP_05402897.1| methionyl-tRNA synthetase [Clostridium difficile QCD-23m63] gi|296449084|ref|ZP_06890874.1| methionine--tRNA ligase [Clostridium difficile NAP08] gi|296879907|ref|ZP_06903880.1| methionine--tRNA ligase [Clostridium difficile NAP07] gi|296262177|gb|EFH08982.1| methionine--tRNA ligase [Clostridium difficile NAP08] gi|296429196|gb|EFH15070.1| methionine--tRNA ligase [Clostridium difficile NAP07] Length = 645 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 200/475 (42%), Positives = 292/475 (61%), Gaps = 7/475 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + Y++T I YP+ HIGH Y + AD +ARF R G DV F TGTDEHG+KI K A Sbjct: 3 KPSFYVTTPIYYPSGGLHIGHTYSTVAADTIARFKRFCGYDVKFLTGTDEHGEKIQKKAI 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ ++D ++ + + + +DISYDDFIRTTEKRH D + ++ K+ ++GDIYKG Sbjct: 63 EQGMSEIEYLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ +G + V+ EE YFFRLS Y+D+L ++ Sbjct: 123 YEGRYCTPCESFWTESQLLEGNKCPDCGRETYLVK---EESYFFRLSKYEDRLKELFKDD 179 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 F P R+NE+++ F+ GL+DLS++R TFDWGIK+P D ++++YVW+DAL NY+T Sbjct: 180 -SFCFPAARKNEMVANFLDKGLEDLSVTRTTFDWGIKVPFDEKHVIYVWVDALCNYITAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY+ + D K+WPA++ ++GK+I+RFH I WPA L++ L +PK+VF HG+IL +K Sbjct: 239 GYMTDNDEEFKKYWPANVQIVGKEIVRFHTIIWPALLMALGLEVPKQVFGHGWILFADDK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+ P +IE G+D L+YFL+RE A G+DG Y R+N DLAN +GNL+ Sbjct: 299 MSKSKGNVVYPEPIIERYGIDTLKYFLLREFAFGQDGSYTHRNFVTRINYDLANDLGNLI 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+V+M+ K +G+IPT T+ D + + M H AL V LV Sbjct: 359 SRTVAMVEKYNNGIIPTAKVSTDFDADLKEQAVSTRENFEAEMDKMQFHEALESVWKLVR 418 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 ++Y D PW L K D TVLY E IR +A L+ + + ANKI++ Sbjct: 419 RTNKYIDETMPWALAKDEAKKDELDTVLYNLCESIRIIATLINPIMNETANKIYE 473 >gi|302384601|ref|YP_003820423.1| methionyl-tRNA synthetase [Clostridium saccharolyticum WM1] gi|302195229|gb|ADL02800.1| methionyl-tRNA synthetase [Clostridium saccharolyticum WM1] Length = 659 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 200/477 (41%), Positives = 309/477 (64%), Gaps = 13/477 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAIAY + +PHIG+ YE ++AD +AR+ R +G DV F TGTDEHGQKI + A+ AG+ Sbjct: 11 YITTAIAYASGKPHIGNTYEAVLADAIARYKRAEGYDVFFQTGTDEHGQKIEEKAEAAGI 70 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K FVD+ + R + D+++ SYD FIRTT+K H + + ++KK+ ++ DIYKG Y G Sbjct: 71 TPKEFVDRAAGEIRKIWDLMNTSYDKFIRTTDKDHEEQVQKIFKKLYEQDDIYKGYYEGL 130 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + V+ +EE YFFR+S Y D+L+ + +P+FI Sbjct: 131 YCTPCESFFTESQL---VDGKCPDCGRE-VKPAKEEAYFFRMSKYADRLIKHINENPDFI 186 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P+ R+NE+++ F+ GL+DL +SR TF WGI + DP+++ YVW+DALTNY+T GY Sbjct: 187 QPVSRKNEMMNNFLLPGLQDLCVSRTTFQWGIPVSFDPRHVTYVWLDALTNYITGIGY-- 244 Query: 247 NPDGSK----AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 + DG +K WPADLH+IGKDI+RFH IYWP FL++ ++PLPK+VF H ++L K Sbjct: 245 DCDGQSREQFSKLWPADLHLIGKDIIRFHTIYWPIFLMALDIPLPKQVFGHPWLLQGDGK 304 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+ +++ GVDA+RYF++ E+ DG + + +R+N+DLAN +GNLV Sbjct: 305 MSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGIISWELMVERMNSDLANILGNLV 364 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 +R++SM K ++G++ A DE + +V +++++E M+ + A+ + ++ Sbjct: 365 NRTISMSNKYFEGIVKDGKAAEAVDEDLKAVVLEEVKKVQEKMEKLRVADAMTSIFNIFR 424 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++Y D PW L K + +R TVLY E I A LL +F+P + KI L Sbjct: 425 RSNKYIDETTPWTLAKDEASKERLETVLYNLTEAIAIGASLLDSFMPDTSKKILSQL 481 >gi|55822425|ref|YP_140866.1| methionyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066] gi|55738410|gb|AAV62051.1| methionyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066] Length = 667 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 212/523 (40%), Positives = 315/523 (60%), Gaps = 23/523 (4%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+ + HIG AY I DVLAR+ R+ DV + TG DEHGQKI + A+ AG Sbjct: 5 FYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQRAEEAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + +VD + +D+ +LDISYD FIRTT+ H +++++ +KGDIY G YSG Sbjct: 65 ITPQEYVDSMAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEKGDIYLGEYSG 124 Query: 127 WYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 WYS+ DE ++ + EVY+ +G + V+ + EE YFF+LS Y D+L ++Y Sbjct: 125 WYSVSDEEFFTESQLAEVYRDEEGNVIGGVAPSGHEVELVSEESYFFKLSNYADRLTAFY 184 Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 + HPEFI P R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL NY+ Sbjct: 185 KEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFSWGVKVPSDPKHVVYVWIDALINYI 244 Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 T GY N G+ FW D +H+IGKDILRFH+IYWP L++ +LPLP ++ +HG Sbjct: 245 TALGYGQNEHGNFDLFWQNDKNHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVAHG 304 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + + K K+SKS GNVI P ++E G+D LRY+L+R + G DG + + R+N +L Sbjct: 305 WFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYLARINYEL 364 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG +P T+ D + V + ++E + M RA Sbjct: 365 ANDLGNLLNRTVAMINKYFDGQVPAYIENVTDYDADLAKVVAENIEEFHKQMNAVDFPRA 424 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLAN 471 L V +++S ++Y D PW L K + D V+ +R +A L+Q F+ +N Sbjct: 425 LDAVWNIISRTNKYIDETAPWVLAKEDGDEEQLRAVMAHLAASLRVVAHLIQPFMMSTSN 484 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510 I + L + L+ GF + T PIFPR Sbjct: 485 AIMEQLGLP----VVFDLENLELSGFPENVTVISKGTPIFPRL 523 >gi|116627343|ref|YP_819962.1| methionyl-tRNA synthetase [Streptococcus thermophilus LMD-9] gi|116100620|gb|ABJ65766.1| methionyl-tRNA synthetase [Streptococcus thermophilus LMD-9] Length = 667 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 212/523 (40%), Positives = 316/523 (60%), Gaps = 23/523 (4%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+ + HIG AY I DVLAR+ R+ DV + TG DEHGQKI + A+ AG Sbjct: 5 FYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQRAEEAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + +VD + + +D+ +LDISYD FIRTT+ H +++++ +KGDIY G YSG Sbjct: 65 ITPQEYVDSMAVDVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEKGDIYLGEYSG 124 Query: 127 WYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 WYS+ DE ++ + EVY+ +G + V+ + EE YFF+LS Y D+L ++Y Sbjct: 125 WYSVSDEEFFTESQLAEVYRDEEGNVIGGVAPSGHEVELVSEESYFFKLSNYADRLTAFY 184 Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 + HPEFI P R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL NY+ Sbjct: 185 KEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDALINYI 244 Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 T GY N G+ FW D +H+IGKDILRFH+IYWP L++ +LPLP ++ +HG Sbjct: 245 TALGYGQNEHGNFDLFWQNDKNHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVAHG 304 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + + K K+SKS GNVI P ++E G+D LRY+L+R + G DG + + R+N +L Sbjct: 305 WFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYLARINYEL 364 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG +P T+ D + V + ++E + M RA Sbjct: 365 ANDLGNLLNRTVAMINKYFDGQVPAYIENVTDFDADLAKVVAENIEEFHKQMNAVDFPRA 424 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLAN 471 L V +++S ++Y D PW L K + D V+ +R +A L+Q F+ +N Sbjct: 425 LDAVWNIISRTNKYIDETAPWVLAKEDGDEEQLRAVMAHLAASLRVVAHLIQPFMMSTSN 484 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510 I + L + L+ GF + T PIFPR Sbjct: 485 AIMEQLGLP----VVFDLENLELSGFPENVTVISKGTPIFPRL 523 >gi|34764087|ref|ZP_00144966.1| Methionyl-tRNA synthetase; PROTEIN SECRETION CHAPERONIN CSAA [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886141|gb|EAA23438.1| Methionyl-tRNA synthetase; PROTEIN SECRETION CHAPERONIN CSAA [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 636 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 211/514 (41%), Positives = 317/514 (61%), Gaps = 13/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++ST I Y N PH+G AY I ADV+ R+++ G+D F TG DEHGQK+ +AA+ Sbjct: 2 KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFMTGLDEHGQKVEQAAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + + D+ + NF++M LDI YDDFIRTTE RH + + ++ KGDIYKG Sbjct: 62 QNGYTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDMVNAKGDIYKGE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + E ++ ++++ G++ + ++ ++EE YFF++S Y D LL + E H Sbjct: 122 YEGKYCISCETFFPENQL-NGSNKCPDCGKE--LRVLKEESYFFKMSKYADALLKHIEEH 178 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FILP RRNEVISF+K GL+DLS+SR TF WGI I P +I YVW DALTNYLT+ G Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAG 238 Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 + +N D KFW +H+IGKDI+RFHAI WP LLSA + LP + +HG+ +GE Sbjct: 239 F-ENDDKKFDKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV++P + I++ GVDA RY+L+RE G DG Y G+ R+N+DLAN +GNL Sbjct: 298 KMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R++ M K ++G+I D+ I ++ +++++ + M RAL + + Sbjct: 358 LNRTLGMYKKYFNGVIVASSTSEPIDDEIKTMFDDIIKDVEKYMYLFEFSRALETIWKFI 417 Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S +++Y D PW L K R +TV+ + E + ++A L+ ++P+ A KI + L + Sbjct: 418 SRLNKYIDETMPWSLAKDEAKKGRLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477 Query: 480 ADE--NRCFQSLDQR--LKPGFMLHKTFDPIFPR 509 + N F + + K G L + P+FPR Sbjct: 478 DKDITNVKFDDIKEWNIFKEGHKLGEA-SPVFPR 510 >gi|307721053|ref|YP_003892193.1| methionyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294] gi|306979146|gb|ADN09181.1| methionyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294] Length = 647 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 210/508 (41%), Positives = 308/508 (60%), Gaps = 13/508 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N + HIGHAY IAD +AR+ RL G D F TGTDEHGQKI ++A+ AG Sbjct: 4 YITTPIYYVNGEAHIGHAYTTFIADTMARYERLKGEDTFFLTGTDEHGQKIEESAEKAGK 63 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T+ F D+ S F+++ D ISYD FIRTT++ H + ++ + KGDIYK Y G Sbjct: 64 PTQEFADEISATFKNLWDEFGISYDKFIRTTDEDHKKGVQKAFEVMYAKGDIYKDFYEGH 123 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E ++ + ++ DG++ ++EE YFF+LS Y+DKLL +Y +HP+FI Sbjct: 124 YCVSCETFFPETQLI---DGEFCPDCGRATSIVKEESYFFKLSNYEDKLLEHYANHPDFI 180 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244 +P R NEV+SFVK GL+DLS++R +F WG+K+P D +++MYVW+DAL NY+T GY Sbjct: 181 MPRSRANEVVSFVKGGLRDLSVTRTSFSWGVKMPKSIGDDKHVMYVWLDALLNYITALGY 240 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D +K +WPAD+H +GKDILRFHAIYWPAFL+S L LPK + +HG+ GEK+S Sbjct: 241 --GSDEAKMNYWPADIHFVGKDILRFHAIYWPAFLMSLGLELPKHIGAHGWWTRDGEKMS 298 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+ P EV + GV+ LRYF++RE+ G+DG + + R+N++L+N +GNL++R Sbjct: 299 KSKGNVVSPKEVADAYGVENLRYFMLREVPFGQDGDFSQRAFIDRINSELSNDLGNLLNR 358 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + M K D I + + I + + VL + M+N HR L ++ L + Sbjct: 359 IIGMSGKYSDFEIDSVDVEKYHAKEITQM-NTVLNSLDSFMENLQTHRYLEELWKLFAIG 417 Query: 425 DRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 + +PW ++K D A + V ++ + A++L +P N I D L N Sbjct: 418 NGVIQEYEPWVKMKNNQKDEALATVAVVANILAKAAVMLHPIMPNTTNIIADALSFEINN 477 Query: 484 RCFQSL--DQRLKPGFMLHKTFDPIFPR 509 ++ L D++L F + K P+FPR Sbjct: 478 ASYKELIIDKKLLKLFNIKKV-PPLFPR 504 >gi|312277854|gb|ADQ62511.1| Methionyl-tRNA synthetase MetG [Streptococcus thermophilus ND03] Length = 667 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 212/523 (40%), Positives = 315/523 (60%), Gaps = 23/523 (4%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+ + HIG AY I DVLAR+ R+ DV + TG DEHGQKI + A+ AG Sbjct: 5 FYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQRAEEAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + +VD + +D+ +LDISYD FIRTT+ H +++++ +KGDIY G YSG Sbjct: 65 ITPQEYVDSMAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEKGDIYLGEYSG 124 Query: 127 WYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 WYS+ DE ++ + EVY+ +G + V+ + EE YFF+LS Y D+L ++Y Sbjct: 125 WYSVSDEEFFTESQLAEVYRDEEGNVIGGVAPSGHEVELVSEESYFFKLSNYADRLTAFY 184 Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 + HPEFI P R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL NY+ Sbjct: 185 KEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFSWGVKVPSDPKHVVYVWIDALINYI 244 Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 T GY N G+ FW D +H+IGKDILRFH+IYWP L++ +LPLP ++ +HG Sbjct: 245 TALGYGQNEHGNFDLFWQNDKNHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVAHG 304 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + + K K+SKS GNVI P ++E G+D LRY+L+R + G DG + + R+N +L Sbjct: 305 WFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYLARINYEL 364 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG +P T+ D + V + ++E + M RA Sbjct: 365 ANDLGNLLNRTVAMINKYFDGQVPAYIENVTDYDADLAKVVAENIEEFHKQMNAVDFPRA 424 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLAN 471 L V +++S ++Y D PW L K + D V+ +R +A L+Q F+ +N Sbjct: 425 LDAVWNIISRTNKYIDETAPWVLAKEDGDEEQLRAVMAHLAASLRVVAHLIQPFMMSTSN 484 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510 I + L + L+ GF + T PIFPR Sbjct: 485 AIMEQLGLP----VVFDLENLELSGFPENVTVISKGTPIFPRL 523 >gi|309775299|ref|ZP_07670308.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] gi|308916962|gb|EFP62693.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] Length = 681 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 203/481 (42%), Positives = 309/481 (64%), Gaps = 13/481 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAI Y + +PHIG+ YE+I+ D +AR+ R G DV F TGTDEHGQKI + A+ AGV Sbjct: 36 YITTAITYTSGRPHIGNTYEIILTDAIARYKRQQGYDVFFQTGTDEHGQKIEEKAKEAGV 95 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K FVD+ + R D+++ SYD FIRTT+ H + ++KK+ ++GDIYK Y G Sbjct: 96 TPKEFVDKVAGIVRKNFDMMNTSYDYFIRTTDDYHEKQVQKIFKKLYEQGDIYKSTYEGL 155 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + PV+ EE YFF L Y +L+ + E HPEFI Sbjct: 156 YCTPCESFWTESQL---VDGKCPDCGR-PVEKASEEAYFFNLQKYAPRLIKHIEDHPEFI 211 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R+NE+I+ F+K GL+DL +SR +F WGI + DP +++YVWIDAL+NY+T+ G+ Sbjct: 212 QPESRKNEMINNFLKPGLQDLCVSRTSFKWGIPVDFDPGHVVYVWIDALSNYITSLGF-- 269 Query: 247 NPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 + DG+ K+WPAD+H+IGKDILRFH IYWP L++ PLPK+VF H ++L K Sbjct: 270 DADGNHGELYKKYWPADVHIIGKDILRFHTIYWPIMLMALGEPLPKQVFGHPWLLVGDGK 329 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GN I E++ GVDA+RYF++ E+ +DG D + +R+N+DLAN +GNLV Sbjct: 330 MSKSKGNAIYADELVHYFGVDAVRYFVLHEMPFAQDGTITWDLVVERINSDLANVLGNLV 389 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 +R++SM K ++G+I P + D+ ++++ + + + M+ + A+ ++ +L+ Sbjct: 390 NRTISMQNKYFNGVISNPLEQEDIDKELIALALDTPKRVEKKMETLHVGEAIDEIFTLLK 449 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++Y D PW L K DR +TVLY +E IR A+LL +++P+ A KI + L + Sbjct: 450 RCNKYIDETTPWVLGKDEAKKDRLATVLYNLLECIRISAVLLSSYMPETAEKILEELSTS 509 Query: 481 D 481 + Sbjct: 510 E 510 >gi|55820534|ref|YP_138976.1| methionyl-tRNA synthetase [Streptococcus thermophilus LMG 18311] gi|55736519|gb|AAV60161.1| methionyl-tRNA synthetase [Streptococcus thermophilus LMG 18311] Length = 667 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 212/523 (40%), Positives = 315/523 (60%), Gaps = 23/523 (4%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+ + HIG AY I DVLAR+ R+ DV + TG DEHGQKI + A+ AG Sbjct: 5 FYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQRAEEAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + +VD + +D+ +LDISYD FIRTT+ H +++++ +KGDIY G YSG Sbjct: 65 ITPQEYVDSMAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEKGDIYLGEYSG 124 Query: 127 WYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 WYS+ DE ++ + EVY+ +G + V+ + EE YFF+LS Y D+L ++Y Sbjct: 125 WYSVSDEEFFTESQLAEVYRDEEGNVIGGVAPSGHEVELVSEESYFFKLSNYADRLTAFY 184 Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 + HPEFI P R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL NY+ Sbjct: 185 KEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDALINYI 244 Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 T GY N G+ FW D +H+IGKDILRFH+IYWP L++ +LPLP ++ +HG Sbjct: 245 TALGYGQNEHGNFDLFWQNDKNHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVAHG 304 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + + K K+SKS GNVI P ++E G+D LRY+L+R + G DG + + R+N +L Sbjct: 305 WFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYLARINYEL 364 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG +P T+ D + V + ++E + M RA Sbjct: 365 ANDLGNLLNRTVAMINKYFDGQVPAYIENVTDYDADLAKVVAENIEEFHKQMNAVDFPRA 424 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLAN 471 L V +++S ++Y D PW L K + D V+ +R +A L+Q F+ +N Sbjct: 425 LDAVWNIISRTNKYIDETAPWVLAKEDGDEEQLRAVMAHLAASLRVVAHLIQPFMMSTSN 484 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510 I + L + L+ GF + T PIFPR Sbjct: 485 AIMEQLGLP----VVFDLENLELSGFPENVTVISKGTPIFPRL 523 >gi|317499441|ref|ZP_07957708.1| methionyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] gi|316893313|gb|EFV15528.1| methionyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] Length = 656 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 202/474 (42%), Positives = 310/474 (65%), Gaps = 13/474 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAI Y + +PHIG+ YE+I+AD +AR+ R++G DV F TGTDEHGQK+ A+ GV Sbjct: 7 YITTAITYTSGKPHIGNTYEIILADSIARYKRMEGYDVFFQTGTDEHGQKVELKAEEKGV 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K FVD + + + D+++ SYD FIRTT++ H + ++KK+ ++GDIYKG Y G Sbjct: 67 TPKEFVDDVAGEIKRIWDLMNTSYDRFIRTTDEDHEKQVQKIFKKLYEQGDIYKGEYEGL 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + PVQ +EE YF +LS Y D+L+ + +HPEFI Sbjct: 127 YCTPCESFFTESQL---VDGKCPDCGR-PVQPAKEEAYFLKLSKYADRLIEHINTHPEFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R+NE+++ F+ GL+DL +SR +F WGI + D +I+YVW+DALTNY+T GY Sbjct: 183 QPESRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDEGHIVYVWLDALTNYITGIGY-- 240 Query: 247 NPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 + DG+ + KFWPADLH+IGKDI+RFH IYWP L++ +LPLPK+VF H ++L K Sbjct: 241 DCDGNSSDKFNKFWPADLHLIGKDIIRFHTIYWPIILMALDLPLPKQVFGHPWLLQGDGK 300 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+ ++++ GVDA+RYF++ E+ +DG + + +R+N+DLAN +GNLV Sbjct: 301 MSKSKGNVLYADDLVDFFGVDAVRYFVLHEMPFERDGVISWELMIERMNSDLANILGNLV 360 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 +R++SM K + G++ G + D+ + +V + ++ E M + + ++ ++ +L Sbjct: 361 NRTISMSNKYFGGIVEDKGVVGDYDDDLKAVVTGTRDKVAEKMADLRVADSMTEIFNLFR 420 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +RY D PW L K + DR +TVLY VE I A LL ++P+ + KIF Sbjct: 421 RCNRYIDETMPWVLAKDEASKDRLATVLYNLVEGITIGASLLSPYMPETSEKIF 474 >gi|126701164|ref|YP_001090061.1| methionyl-tRNA synthetase [Clostridium difficile 630] gi|115252601|emb|CAJ70444.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) [Clostridium difficile] Length = 645 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 200/475 (42%), Positives = 292/475 (61%), Gaps = 7/475 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + Y++T I YP+ HIGH Y + AD +ARF R G DV F TGTDEHG+KI K A Sbjct: 3 KPSFYVTTPIYYPSGGLHIGHTYSTVAADTIARFKRFCGYDVKFLTGTDEHGEKIQKKAI 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ ++D ++ + + + +DISYDDFIRTTEKRH D + ++ K+ ++GDIYKG Sbjct: 63 EQGMSEIEYLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ +G + V+ EE YFFRLS Y+D+L ++ Sbjct: 123 YEGRYCTPCESFWTESQLLEGNKCPDCGRETYLVK---EESYFFRLSKYEDRLKELFKDD 179 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 F P R+NE+++ F+ GL+DLS++R TFDWGIK+P D ++++YVW+DAL NY+T Sbjct: 180 -SFCFPAARKNEMVANFLDKGLEDLSVTRTTFDWGIKVPFDEKHVIYVWVDALCNYITAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY+ + D K+WPA++ ++GK+I+RFH I WPA L++ L +PK+VF HG+IL +K Sbjct: 239 GYMTDNDEEFKKYWPANVQIVGKEIVRFHTIIWPALLMALGLEVPKQVFGHGWILFADDK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+ P +IE G+D L+YFL+RE A G+DG Y R+N DLAN +GNL+ Sbjct: 299 MSKSKGNVVYPEPIIERYGIDTLKYFLLREFAFGQDGSYTHRNFVTRINYDLANDLGNLI 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+V+M+ K +G+IPT T+ D + + M H AL V LV Sbjct: 359 SRTVAMVEKYNNGIIPTAKVSTDFDADLKEQAVSTRENFEAEMDKMQFHEALESVWKLVR 418 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 ++Y D PW L K T TVLY E IR +A L+ + + ANKI++ Sbjct: 419 RTNKYIDETMPWALAKDETKKGELDTVLYNLCESIRIIATLINPIMNETANKIYE 473 >gi|256826934|ref|YP_003150893.1| methionyl-tRNA synthetase [Cryptobacterium curtum DSM 15641] gi|256583077|gb|ACU94211.1| methionyl-tRNA synthetase [Cryptobacterium curtum DSM 15641] Length = 526 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 212/512 (41%), Positives = 300/512 (58%), Gaps = 13/512 (2%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+T I Y NA PH+G AY I ADVL+R+ R+DG DV F G DEHGQK+A A G+T Sbjct: 8 ITTPIYYVNAAPHLGTAYTTIGADVLSRYKRMDGYDVAFVGGMDEHGQKVADTAAKKGMT 67 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + + D F D ++LDI+Y D +RTTE+R T + W + +KG +YK Y GWY Sbjct: 68 PQAWCDSMEPAFLDAWNLLDITYTDIVRTTEERQTRTVQRFWGDLYEKGWLYKDSYDGWY 127 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWME-EEGYFFRLSAYQDKLLSYYESHPEF 186 + +E YY + ++ K DG + + H PVQ EE +FF+LS +QD+LL++Y+ HP+F Sbjct: 128 CVHEETYYAESDLEKDEDGTFVCPECHRPVQKASGEENWFFKLSEFQDRLLAFYDEHPDF 187 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P+ RRNE++SFVK GLKDLS+SR TFDWGI +P D ++ YVW DAL Y T GY D Sbjct: 188 IQPLTRRNEIVSFVKGGLKDLSISRSTFDWGIPLPFDTGHVAYVWADALLAYFTGIGYAD 247 Query: 247 NP-DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 G WP H +GKDI RFH + WPA L++A LP+ KVF HGF+L KGEK+SK Sbjct: 248 EARAGEFEARWPMQYHFVGKDITRFHCVIWPAMLMAAGLPITHKVFGHGFLLTKGEKMSK 307 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S GN + P +++ GVDA RY+ + ++ G DG + + + NADLAN GNLVSR Sbjct: 308 SKGNGVMPADLVRIFGVDAYRYYFMSDVQFGHDGNISMERMVQVYNADLANTWGNLVSRV 367 Query: 366 VSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 +M K +DG +P P + E+ + + + + + M A A V L S V Sbjct: 368 FNMTGKYFDGKVPEAPSSAVEN--PLRELANNLYETYDACMAAVDFTGAAAAVQQLASRV 425 Query: 425 DRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-- 479 + Y + PW L K +P RA + V+Y +E R +A+ + F+P+ ++++F L + Sbjct: 426 NLYVEDSAPWNLAK-DPARADELAAVIYNALEACRIIALFMSPFMPRTSDEVFHRLSLDA 484 Query: 480 -ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 +D L P + +P+FPR Sbjct: 485 ASDSTDIESQSAWGLLPAGNAVEKGEPLFPRL 516 >gi|317054912|ref|YP_004103379.1| methionyl-tRNA synthetase [Ruminococcus albus 7] gi|315447181|gb|ADU20745.1| methionyl-tRNA synthetase [Ruminococcus albus 7] Length = 651 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 202/494 (40%), Positives = 311/494 (62%), Gaps = 14/494 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK YI+TAIAY + +PHIG+ YE++ D +ARF R+ G DV F TGTDEHG KI A+ Sbjct: 3 KEKFYITTAIAYASKKPHIGNTYEVVFTDAIARFKRMQGYDVFFLTGTDEHGMKIEGLAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ K VD+ + +D+ ++ISYD FIRTT+++H + ++ K+ ++GDIYKG Sbjct: 63 EEGISPKEHVDKVAGEIKDICKCMNISYDGFIRTTDEQHEKVVQKIFNKLYEQGDIYKGS 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + E+++ ++ DG+ + V+ EE YF +LS YQ L Y E+H Sbjct: 123 YEGMYCVPCESFWTQSQL---VDGKCPDCGRE-VKPAHEEAYFLKLSKYQQWLEDYIETH 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI+P R+ E+++ F+K GL+DL +SR TF W I + DP++++YVWIDAL+NY+T Sbjct: 179 PDFIVPESRKKEMLNNFIKPGLQDLCVSRTTFTWSIPVTFDPKHVIYVWIDALSNYITAL 238 Query: 243 GYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GY +PDGS +F WP D HVIGKDI+RFH+IYWP L + + +PKK+F H +IL Sbjct: 239 GY--DPDGSSEQFKKYWPCDCHVIGKDIMRFHSIYWPIMLHALGVEIPKKLFGHNWILFG 296 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 +K+SKS GNVI EV++ GVD RY+L+ E+ DG + L +R N+DLAN +G Sbjct: 297 EDKMSKSKGNVIYADEVVDTFGVDGARYYLLSEMGLNGDGSITYESLIERYNSDLANTLG 356 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLV+R+V+M K + G I P D+ ++++ +++ + + + A+ +++ Sbjct: 357 NLVNRTVAMTKKYFGGEIRQPEVKEPVDDELIALAVETPKKVADLIDQYRMADAMEAIMT 416 Query: 420 LVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L ++Y D +PW L K R STVLY +E IR L ++L+AF+P+ + KI + Sbjct: 417 LARRANKYIDETEPWVLGKDEAKFGRLSTVLYNLLETIRFLGVILEAFMPETSEKI--LT 474 Query: 478 FVADENRCFQSLDQ 491 + + + F SL++ Sbjct: 475 QIGTDVKGFDSLNE 488 >gi|167768118|ref|ZP_02440171.1| hypothetical protein CLOSS21_02673 [Clostridium sp. SS2/1] gi|167709642|gb|EDS20221.1| hypothetical protein CLOSS21_02673 [Clostridium sp. SS2/1] gi|291559969|emb|CBL38769.1| methionyl-tRNA synthetase [butyrate-producing bacterium SSC/2] Length = 656 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 202/474 (42%), Positives = 310/474 (65%), Gaps = 13/474 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAI Y + +PHIG+ YE+I+AD +AR+ R++G DV F TGTDEHGQK+ A+ GV Sbjct: 7 YITTAITYTSGKPHIGNTYEIILADSIARYKRMEGYDVFFQTGTDEHGQKVELKAEEKGV 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K FVD + + + D+++ SYD FIRTT++ H + ++KK+ ++GDIYKG Y G Sbjct: 67 TPKEFVDDVAGEIKRIWDLMNTSYDRFIRTTDEDHEKQVQKIFKKLYEQGDIYKGEYEGL 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + PVQ +EE YF +LS Y D+L+ + +HPEFI Sbjct: 127 YCTPCESFFTESQL---VDGKCPDCGR-PVQPAKEEAYFLKLSKYADRLIEHINTHPEFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R+NE+++ F+ GL+DL +SR +F WGI + D +I+YVW+DALTNY+T GY Sbjct: 183 QPESRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDEGHIVYVWLDALTNYITGIGY-- 240 Query: 247 NPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 + DG+ + KFWPADLH+IGKDI+RFH IYWP L++ +LPLPK+VF H ++L K Sbjct: 241 DCDGNSSDKFNKFWPADLHLIGKDIIRFHTIYWPIILMALDLPLPKQVFGHPWLLQGDGK 300 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+ ++++ GVDA+RYF++ E+ +DG + + +R+N+DLAN +GNLV Sbjct: 301 MSKSKGNVLYADDLVDFFGVDAVRYFVLHEMPFERDGVISWELMIERMNSDLANILGNLV 360 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 +R++SM K + G++ G + D+ + +V + ++ E M + + ++ ++ +L Sbjct: 361 NRTISMSNKYFGGIVEDKGVVGDYDDDLKAVVTGTKDKVAEKMADLRVADSMTEIFNLFR 420 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +RY D PW L K + DR +TVLY VE I A LL ++P+ + KIF Sbjct: 421 RCNRYIDETMPWVLAKDEASKDRLATVLYNLVEGITIGASLLSPYMPETSEKIF 474 >gi|256845534|ref|ZP_05550992.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] gi|256719093|gb|EEU32648.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] Length = 636 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 211/514 (41%), Positives = 317/514 (61%), Gaps = 13/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++ST I Y N PH+G AY I ADV+ R+++ G+D F TG DEHGQK+ +AA+ Sbjct: 2 KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFMTGLDEHGQKVEQAAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + + D+ + NF++M LDI YDDFIRTTE RH + + ++ KGDIYKG Sbjct: 62 QNGYTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDTVNAKGDIYKGE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + E ++ ++++ G++ + ++ ++EE YFF++S Y D LL + E H Sbjct: 122 YEGKYCISCETFFPENQL-NGSNKCPDCGKE--LRVLKEESYFFKMSKYADALLKHIEEH 178 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FILP RRNEVISF+K GL+DLS+SR TF WGI I P +I YVW DALTNYLT+ G Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAG 238 Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 + +N D KFW +H+IGKDI+RFHAI WP LLSA + LP + +HG+ +GE Sbjct: 239 F-ENDDKKFDKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV++P + I++ GVDA RY+L+RE+ G DG Y G+ R+N+DLAN +GNL Sbjct: 298 KMSKSRGNVVNPYDEIKKYGVDAFRYYLLREVNFGTDGDYSTKGIIGRLNSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R++ M K ++ +I D+ I ++ +++++ + M RAL + + Sbjct: 358 LNRTLGMYKKYFNSVIVASSTAEPIDDEIKTMFDDIIKDVEKYMYLFEFSRALETIWKFI 417 Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S +++Y D PW L K R +TV+ + E + ++A L+ ++P+ A KI + L + Sbjct: 418 SRLNKYIDETMPWSLAKDEAKKGRLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477 Query: 480 ADE--NRCFQSLDQR--LKPGFMLHKTFDPIFPR 509 + N F + + K G L + PIFPR Sbjct: 478 DKDITNVKFDDIKEWNIFKEGHKLGEA-SPIFPR 510 >gi|331083329|ref|ZP_08332442.1| hypothetical protein HMPREF0992_01366 [Lachnospiraceae bacterium 6_1_63FAA] gi|330404410|gb|EGG83955.1| hypothetical protein HMPREF0992_01366 [Lachnospiraceae bacterium 6_1_63FAA] Length = 652 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 203/479 (42%), Positives = 304/479 (63%), Gaps = 13/479 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++K YI+TAIAY + +PHIG+ YE I+AD +ARF R G DV F TGTDEHGQKI A Sbjct: 2 DKKKYYITTAIAYTSGKPHIGNTYEAILADSIARFKRQQGYDVFFQTGTDEHGQKIELKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AGV+ K FVD + + + D+++ SYD FIRTT+ H + ++KK+ D+GDIYKG Sbjct: 62 AEAGVSCKEFVDNVAGEIKSIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYKG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y E+++ + ++ DG+ + PV +EE YFFR+S Y +L+ + + Sbjct: 122 YYEGMYCTPCESFFTESQL---VDGKCPDCGR-PVTPAKEEAYFFRMSKYAQRLIDHINT 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEFI P+ R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVW+DALTNY+T Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 237 Query: 242 TGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 GY + DG K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H ++L Sbjct: 238 IGY--DCDGENTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLL 295 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 K+SKS GNV+ ++++ GVDA+RYF++ E+ DG + + +R+N++LAN Sbjct: 296 QGDGKMSKSKGNVLYADQLVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSELANT 355 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 +GNLV+R++SM K + G + DE + +V ++ M+ + A+ ++ Sbjct: 356 LGNLVNRTISMSNKYFGGEVKNTNVCEPVDEELKAVVLGTKAKVAAKMEELRVADAITEI 415 Query: 418 ISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +L ++Y D PW L K DR +TVLY VE I A LL++F+P+ KI Sbjct: 416 FTLFKRCNKYIDETMPWALAKEEDKQDRLATVLYNLVEGICIGASLLESFMPETTGKIL 474 >gi|311897996|dbj|BAJ30404.1| putative methionyl-tRNA synthetase [Kitasatospora setae KM-6054] Length = 534 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 209/518 (40%), Positives = 307/518 (59%), Gaps = 17/518 (3%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I Y N +PH+GHAY + DVL R+HR G DV + TGTDEHGQKI + A+ GV Sbjct: 14 YVTTPIYYVNDRPHLGHAYTTVAGDVLTRWHRQRGEDVWYLTGTDEHGQKILRTAEANGV 73 Query: 68 TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + + D+ ++ + + L I+ DDFIRTTE RH D + + + DKG+IY+G Y+G Sbjct: 74 TPQEWCDKLVGEAWKPLWEHLRIANDDFIRTTEARHTDRVQEFVQDLYDKGEIYQGSYTG 133 Query: 127 WYSLRDEAYYNDDEVYKGA--DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 Y + E Y E+ G D + PV+W+EEE YFFRLSAY KLL +Y ++P Sbjct: 134 PYCVGCEEYKLPGELLPGTTEDEKLCPVHKRPVEWLEEENYFFRLSAYGPKLLEFYAANP 193 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RNEV+ FV+ LKDLS+SR TFDWG+ +P D ++++YVW+DAL NY+T GY Sbjct: 194 DFIQPASARNEVLRFVEQDLKDLSISRSTFDWGVPLPWDAKHVLYVWVDALQNYITAAGY 253 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 +P+ A+ WPA +H++GKDILRFHA+ WPA L++A LPLP++V ++G+++ GEK+S Sbjct: 254 GSDPE-RFARLWPASVHLVGKDILRFHAVIWPAMLMAAGLPLPRRVVANGWLMVGGEKMS 312 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS I P ++ GVDA RY+ +R I G DG + + R ++LAN GNL SR Sbjct: 313 KSNLTGIAPTDLTSHFGVDAYRYYFLRAIPFGTDGSFSWEDFTARYTSELANDFGNLASR 372 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSE 423 +M+ K +DG +P A +++++ + E + +L +A V V Sbjct: 373 VAAMVGKYFDGALPAATAHGPAEQALADALVKATAEADRKIGEELDFAGGIAAVFEFVKL 432 Query: 424 VDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-- 477 V+ Y Q+PW++ K R +TVLY E +R A+LL +P A +++D L Sbjct: 433 VNGYLTEQEPWKVAKDTTAEGQARLATVLYTAAEALRATAVLLNPLMPDSAAELWDSLGA 492 Query: 478 -----FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 +AD+ + RL G + K + +FPR Sbjct: 493 EPALGALADQRIATVADWGRLPAGATVTKG-EILFPRL 529 >gi|291460472|ref|ZP_06599862.1| methionine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262] gi|291416844|gb|EFE90563.1| methionine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262] Length = 673 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 209/502 (41%), Positives = 310/502 (61%), Gaps = 21/502 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E++ YI+TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI + A Sbjct: 2 EKKAYYITTAIAYASGKPHIGNTYEIVLADAIARFKRFEGYDVFFQTGTDEHGQKIEQKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + AG+ +VD R + D+++ SYD F+RTT+ H + +++K+ +KGDIYKG Sbjct: 62 REAGMEPGQYVDGVVGEIRAIWDLMNTSYDKFMRTTDPYHEKQVQKMFRKMYEKGDIYKG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY E+++ D ++ DG+ + PV+ E YFFR+S Y D+L+ + E Sbjct: 122 VYEGWYCTPCESFWTDSQL---VDGKCPDCGR-PVERASESSYFFRMSKYADRLMKHIEE 177 Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEFI P+ R+NE++ +F+K GL+DLS+SR F WGI + DP+ ++YVW+DALTNY+T Sbjct: 178 HPEFIQPVSRKNEMVNNFLKPGLQDLSVSRTVFKWGIPVDFDPENVIYVWLDALTNYITG 237 Query: 242 TGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 GY + DG+ + ++WPADLH+IGKDI+RFH +YWP FL+S LPLPK+VF H ++L Sbjct: 238 LGY--DVDGNSSERFHRYWPADLHLIGKDIIRFHTLYWPIFLMSLELPLPKQVFGHPWLL 295 Query: 298 ------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 +G K+SKS GNVI E++ GVDA+R+F++ E+ DG + + +R N Sbjct: 296 TAAGKSEEGVKMSKSRGNVIYADELVRLFGVDAVRFFVIHEMPFENDGVISWELMAERYN 355 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 LAN +GNLV RS++M K + G++ GA DE + + ++ I M I Sbjct: 356 GMLANILGNLVKRSIAMSNKYFGGIVRDSGAAEPVDEDLKETVLKNVRAIVAKMDELRIA 415 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKL 469 AL + + ++Y D +PW L K R TVLY E I A +L++F+P+ Sbjct: 416 DALDLLFDIFRRSNKYIDETEPWLLAKEEGKSARLETVLYNLTEAIVIGASVLESFMPRT 475 Query: 470 ANKIFDILFVADENRCFQSLDQ 491 A +I L E R + +D+ Sbjct: 476 AEEILRQL--NTEARPLEQMDR 495 >gi|218437104|ref|YP_002375433.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7424] gi|218169832|gb|ACK68565.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7424] Length = 530 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 204/489 (41%), Positives = 298/489 (60%), Gaps = 14/489 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++K ++T + Y N PHIG AY +IADV+AR+ RL G VL TGTDEHGQKI + A+ Sbjct: 8 QKKFALTTPLYYVNDIPHIGSAYTTMIADVIARWKRLQGYSVLLITGTDEHGQKIQRTAE 67 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 + G+ + D+ F+ + D L+ISYD F RT+ +RH D + ++++ ++GDIY Sbjct: 68 SKGLNPQAHCDRIVDEFKTLWDKLNISYDRFSRTSSERHQDIVKEFFQRVWEQGDIYLDQ 127 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY + E + E+ + Q + +W +EE YFFRLS YQ+KL +Y + Sbjct: 128 QKGWYCVACEEFKEQRELTEEGYCQIHTNLK--AEWKDEENYFFRLSKYQEKLEEFYRLN 185 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 PEFI P RRNEV++FVK GL+D S+SR DWG +P DP + +YVW DAL Y+T Sbjct: 186 PEFIQPESRRNEVLNFVKQGLQDFSISRVNVDWGFPLPSDPNHTIYVWFDALLGYITP-- 243 Query: 244 YLDNPD------GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 L NPD + + +WP +LH+IGKDILRFHA+YWPA L+SA LPLP +VF HGF+ Sbjct: 244 -LLNPDQEPTLENALSIWWPINLHLIGKDILRFHAVYWPAMLMSAQLPLPDRVFGHGFLT 302 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 G+K+ KSLGN +DP ++I G DA+RY+ V+EI GKDG +++ +NADLAN Sbjct: 303 KDGQKMGKSLGNTLDPFDLIYRYGADAVRYYFVKEIELGKDGDFNETRFVNILNADLAND 362 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE-IRENMQNQLIHRALAQ 416 +GNL++R++ M+ K +G P + + + + L + + L E + E+M++ + A + Sbjct: 363 LGNLLNRTLGMVQKYCNGNGPQLTSDSLDENNPLKIIGQQLSERVSESMESLQFNGACEE 422 Query: 417 VISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + SL+ ++Y D PW L K+ VLY +E +R A LL P L+N+I+ Sbjct: 423 IFSLIRACNKYIDESAPWSLFKQKKQTEVEQVLYGVLESVRLAAYLLSPITPNLSNRIYQ 482 Query: 476 IL-FVADEN 483 L F D N Sbjct: 483 QLGFCVDFN 491 >gi|210629937|ref|ZP_03296184.1| hypothetical protein COLSTE_00068 [Collinsella stercoris DSM 13279] gi|210160754|gb|EEA91725.1| hypothetical protein COLSTE_00068 [Collinsella stercoris DSM 13279] Length = 533 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 212/534 (39%), Positives = 313/534 (58%), Gaps = 26/534 (4%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + YI+T I Y NA PH+G AY IIADV AR+ R G V F TG DEHGQK+A+ Sbjct: 1 MSSKPSYYITTPIYYVNADPHLGTAYSTIIADVQARYRRAAGYSVKFLTGMDEHGQKVAE 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ G+T + + D + +F ++ + L+IS DDFIRTTE R + LW+++ + G IY Sbjct: 61 AAEKHGMTPQEWCDSQAPHFHELWEELEISNDDFIRTTEPRQKRAVQYLWERMQEAGYIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQD 174 KG Y GWY + DE ++ + +V K G +GQ+ H P++ ++EE +FF+LSA+QD Sbjct: 121 KGSYDGWYCVPDETFFTETQVEKADEARGTEGQHLCPDCHRPLERVKEESWFFKLSAFQD 180 Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 KLL+ Y+ HP+F+ P R NEV SFV+ GL DLS+SR +FDWGI++P D +++ YVW DA Sbjct: 181 KLLALYDEHPDFVQPDFRMNEVRSFVEGGLNDLSVSRTSFDWGIQVPFDDEHVTYVWFDA 240 Query: 235 LTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291 LTNY+T GY D + A F WPA H++GKDI+RFH + WPA L++ LP+ VF Sbjct: 241 LTNYMTAVGYGQEGDEAAADFAYRWPAQTHIVGKDIIRFHCVIWPAMLMALGEALPEHVF 300 Query: 292 SHGFI------LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345 +HGF+ K EK+SKS GN I P EVIE++GV+ RY+ + ++ G DG Sbjct: 301 AHGFLTVKNEETGKAEKMSKSRGNAIAPREVIEKLGVEGYRYYFMTDVTPGTDGAISFGR 360 Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403 +++ NADLAN GNL+SRS +M +K ++G P A ++ + +V + + Sbjct: 361 MEQVYNADLANSWGNLISRSTNMCIKYFEGATPERDSSAAGYAENPLAAVADGLFERYAA 420 Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAI 460 M+ A +V+ LV + Y + +PW L K +P + + V++ +E IR A Sbjct: 421 KMEAFAYGDAAKEVMELVHAANLYIENSEPWTLAK-DPAKTGELANVIWNLLECIRITAH 479 Query: 461 LLQAFVPKLANKIFDILFV----ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 LL +P + + + A +N +L G + K + +FPR Sbjct: 480 LLMPLMPSTSAEALRRIGCEGEAATDNMAAACAWGQLAAGLPVEKG-EALFPRL 532 >gi|88856857|ref|ZP_01131510.1| methionyl-tRNA synthetase [marine actinobacterium PHSC20C1] gi|88813927|gb|EAR23796.1| methionyl-tRNA synthetase [marine actinobacterium PHSC20C1] Length = 526 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 207/485 (42%), Positives = 297/485 (61%), Gaps = 10/485 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + YI+T I Y N PHIGHAY + ADVLAR+HR G D TGTDEHGQKI + Sbjct: 1 MSAGDSFYIATPIFYVNDVPHIGHAYTEVAADVLARWHRQRGEDAWLLTGTDEHGQKILR 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A T + + D+ + +++ + + +DI+ DDFIRTT++RH +++ D G I Sbjct: 61 TAVANNTTPQEWADRLVADSWQPLLETIDIANDDFIRTTDERHEKAVATFLQRLYDDGHI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN----AQHN-PVQWMEEEGYFFRLSAYQD 174 Y G Y G+Y + E Y D++ DG+Y A H+ PV+ ++E+ YFFR+S + Sbjct: 121 YAGEYEGYYCVGCEEYKQLDDLVTAPDGEYKGQLVCAIHSRPVEVLKEKNYFFRMSDFGQ 180 Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 KLL YES P+F+ P RNE++ FVK GL DLS+SR +FDWG+K+P D +++YVW DA Sbjct: 181 KLLDLYESQPDFVQPASVRNEIVQFVKQGLDDLSISRSSFDWGVKVPWDETHVVYVWFDA 240 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L NY++ GY + + AK WPA + ++GKDI RFHA+ WPA L++A LP+P+ VF HG Sbjct: 241 LLNYVSAIGYGVDEE-QFAKRWPA-VQLVGKDIARFHAVIWPAMLMAAGLPVPRAVFGHG 298 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 ++L GEK+SKS I P ++ + G DA RY+ + I G+DG + + L R ++L Sbjct: 299 WLLVGGEKMSKSKLTGIAPSQITDTFGSDAFRYYFMSAITFGQDGSFSWEDLSARYQSEL 358 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 ANG GNL SR ++M+ K +DG IPT G T SDE+I++ R ++ + I+ AL Sbjct: 359 ANGFGNLASRVIAMVNKYFDGEIPTLGELTASDEAIIATQKRATEDSNAFIDTFAINEAL 418 Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 A V LV E++ Y Q+PW L K N +R TVL TV + LAILL +PK + Sbjct: 419 ASVWQLVDELNGYITEQEPWALSKDPANRERLGTVLATTVNGLGTLAILLSPVLPKATER 478 Query: 473 IFDIL 477 ++ + Sbjct: 479 LWSAI 483 >gi|257125470|ref|YP_003163584.1| methionyl-tRNA synthetase [Leptotrichia buccalis C-1013-b] gi|257049409|gb|ACV38593.1| methionyl-tRNA synthetase [Leptotrichia buccalis C-1013-b] Length = 633 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 207/476 (43%), Positives = 306/476 (64%), Gaps = 13/476 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YPNA PH+G AY II DV+AR+ RL G +V F TG DEHGQKI +AA+ G Sbjct: 5 FYITTPIYYPNAAPHVGTAYTTIICDVVARYKRLAGEEVGFMTGVDEHGQKIQEAAEKNG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + +VD+ S NF + L+IS DF+RTT++RH T R + KK+ DKGDIY+G Y G Sbjct: 65 FTPQQWVDKMSLNFTTLWGKLNISNTDFLRTTQERHLKTVREIIKKVHDKGDIYRGEYVG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 YS+ +E + ++++ DG+Y + V+ E YFF+LS Y++ LL + E +P+F Sbjct: 125 KYSVSEETFVPENQL---VDGKYMGKEVIDVK---ETSYFFKLSKYENALLEHIEKNPDF 178 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P ++NEVI+F+K GL+DLS+SR TFDWGI + + +I+YVW DAL YLT G+ Sbjct: 179 IKPEGKKNEVIAFIKQGLQDLSISRTTFDWGIPLELEEGHIIYVWFDALNIYLTGAGF-- 236 Query: 247 NPDGSK-AKFWPADL--HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 + D K KFW HV+GKDILRFHAI WPA L+SA + LP + +HG+ +GEK+ Sbjct: 237 STDTEKFDKFWTNGTVNHVVGKDILRFHAIIWPAMLMSAGIKLPDTIAAHGWWTVEGEKM 296 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNV++P E +E+ G+DA RY+L+RE G+D Y K + +R+NADLAN +GNL++ Sbjct: 297 SKSLGNVVNPEEEVEKYGLDAFRYYLMREATFGQDADYSKKAMVQRINADLANDLGNLLN 356 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R++ M K ++ + D + + L ++ +++ N AL + +S Sbjct: 357 RTIGMQKKYFNSEVVLNEVEESFDIEVKELWKITLTDLDKHINNYQFSEALKDIWKFISR 416 Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +++Y D +PW+L K + DR STV+Y V+ + ++A+L+ F+P+ A K+ + L Sbjct: 417 MNKYIDECEPWKLSKDESQKDRLSTVMYNLVDSLYKIAVLISPFMPETAQKMINQL 472 >gi|116491711|ref|YP_811255.1| methionyl-tRNA synthetase [Oenococcus oeni PSU-1] gi|118587385|ref|ZP_01544811.1| methionine-tRNA ligase [Oenococcus oeni ATCC BAA-1163] gi|116092436|gb|ABJ57590.1| methionyl-tRNA synthetase [Oenococcus oeni PSU-1] gi|118432209|gb|EAV38949.1| methionine-tRNA ligase [Oenococcus oeni ATCC BAA-1163] Length = 675 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 210/529 (39%), Positives = 318/529 (60%), Gaps = 24/529 (4%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ + YI+T I YP+ + +G+ Y ++AD +ARFHR G DV F TGTDEHG KI + Sbjct: 1 MTKKNRFYITTPIYYPSGKLQLGNTYTTVLADSVARFHRALGEDVFFLTGTDEHGLKIQE 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG + ++D+ + + + + +++ISYD FIRTT++ H + ++KK D+GDIY Sbjct: 61 KAEAAGKSEMEYLDEMAVSIKKLWKLMNISYDKFIRTTDEYHERVVQHIFKKFMDEGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 KG Y+GWYS+ DE Y+ + EVY+ DG+ + + VQ ++EE YFF++S Y D Sbjct: 121 KGNYTGWYSVSDEEYFTESQLAEVYRDKDGKVIGGKAPSGHEVQLVKEETYFFKMSKYSD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 LL YY HPEF+ P R NE+IS F+K GL+DL+L+R +F+WGI +P D ++++YVWID Sbjct: 181 WLLQYYHDHPEFLQPESRMNEMISNFIKPGLEDLALTRTSFNWGIPVPGDEKHVIYVWID 240 Query: 234 ALTNYLTTTGY------LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP 287 AL+NY+T GY D+ KFWPA+L ++GK+I+RFH IYWP L + LPLP Sbjct: 241 ALSNYITALGYDPELGDFDHQPELFKKFWPANLQLVGKEIVRFHTIYWPIMLHALGLPLP 300 Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +V HG+++ K K+SKS GNV+ P + G+DA+RY+L+R + G DG + + Sbjct: 301 GEVLGHGWLVMKNGKMSKSKGNVVYPETLESRYGLDAVRYYLLRSMPFGNDGVFSPEDFV 360 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 RVN DLAN +GNL++R++SMI + +G IP D + S+ ++ ++ M+ Sbjct: 361 NRVNFDLANDLGNLLNRTISMINRYENGQIPKLDKLLPEDRELEETASQAVENFKDEMEK 420 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAF 465 AL V +L+ ++Y D +PW L K N RA + +R + LLQ Sbjct: 421 VHTADALEAVWTLIRRTNKYIDETEPWVLDK-NKQRAELDDAMAHLAASLRVVGSLLQPV 479 Query: 466 VPKLANKIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + KIFD L + + N F + +K + H T P+FPR Sbjct: 480 LTQAPKKIFDQLGLPEVEPISNLNFADIPSGIK--VVEHPT--PLFPRL 524 >gi|291541997|emb|CBL15107.1| methionyl-tRNA synthetase [Ruminococcus bromii L2-63] Length = 648 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 201/515 (39%), Positives = 315/515 (61%), Gaps = 11/515 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ PHIGH Y + D +AR+ R+ G DV+F TGTDEHG KI + Sbjct: 1 MCQKKPFYITTPIYYPSGNPHIGHCYTTVACDSIARYRRMQGYDVMFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A GVT K +VD+ + F+ + ++ISYD +IRTT+ H +T + ++K++ DKG IY Sbjct: 61 KAAEKGVTPKEYVDEIVKTFKGLWKFMNISYDRYIRTTDDYHIETVQKIFKELYDKGYIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G Y E+++ + ++ G + V +EE YFF++S + D++ Sbjct: 121 KGEYKGKYCTPCESFWTESQLIDGKCPEC----GREVTEAKEEAYFFKMSPFADRIEKLL 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 + +++ P R E+++ F+K GL+DL +SR TF WGI + D ++I+YVW+DAL+NY+ Sbjct: 177 -TETDYLQPKTRAVELVNNFIKPGLEDLCVSRTTFKWGIPVTFDEKHIVYVWVDALSNYI 235 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 + GY + K+WPAD+H++ KDI+RFHAI WPA L++ +LPLPK + HG+I Sbjct: 236 SALGYKNEKFDEFDKYWPADVHMVAKDIMRFHAIIWPAMLMALDLPLPKHLAVHGWITFN 295 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G+K+SKSLGNV+DP + E G DA+RY ++RE+A G D + + + R+N+DLANG+G Sbjct: 296 GQKMSKSLGNVVDPFVLGERYGADAIRYHIMREMALGADSAFSNEIMINRINSDLANGLG 355 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLVSR+V+M+ K + G +PT E D+ ++ + + ++ + M + ALA++ Sbjct: 356 NLVSRTVAMVQKYFGGTLPTERESGEFDDDLIETATSLRAKVDDFMDKTQLQNALAEIFK 415 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 LVS ++Y D PW + K T R +TVLY +E IR LL AF+P K + + Sbjct: 416 LVSRANKYIDETAPWVIAKDETKKARLATVLYNLLEAIRIACTLLSAFMPTTMPKALEQI 475 Query: 478 FVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 ++ +++ D+ L +HK D +FPR Sbjct: 476 GACEKCAGYENCDKFGVLPADVTVHKG-DALFPRI 509 >gi|295094201|emb|CBK83292.1| methionyl-tRNA synthetase [Coprococcus sp. ART55/1] Length = 678 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 204/472 (43%), Positives = 300/472 (63%), Gaps = 9/472 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI A Sbjct: 7 YITTAIAYASGKPHIGNTYEIVLADSIARYKRFAGYDVRFMTGTDEHGQKIENKAFENMQ 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K FVD+ S + + D+++ SYD FIRTT+ H + ++KK+ D+GDIYKG Y G Sbjct: 67 TPKEFVDETSGEIKRIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYKGHYVGK 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ D ++ DG+ + PVQ +EE YFF++S YQDKL+ + E HPEFI Sbjct: 127 YCTPCESFFTDGQL---IDGKCPDCGR-PVQEAKEEAYFFKMSKYQDKLMKHIEQHPEFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-L 245 P RRNE+++ F+K GL+DL +SR +F WGI + DP++++YVW+DAL+NY+T GY + Sbjct: 183 QPESRRNEMVNNFLKPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWVDALSNYITGLGYDV 242 Query: 246 DNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D K K+WPADLH+IGKDILRFH +YWP L++ LPLPK+VF H ++L K+S Sbjct: 243 DGKSDEKFYKYWPADLHLIGKDILRFHTVYWPIMLMALGLPLPKQVFGHPWLLQSDGKMS 302 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+ ++++ GVDA+R+F++ E+ DG + + +R+N++LAN +GNLV+R Sbjct: 303 KSKGNVMYADDMVDIFGVDAVRFFVLHEMPFENDGVISWELMVERLNSELANTLGNLVNR 362 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 ++SM K + G++ DE + V ++ E M + A+ ++ +L Sbjct: 363 TISMSNKYFGGIVTNTNVTEPVDEDLKKVVMDCRYKVAECMDKLKVADAITEIFALFKRC 422 Query: 425 DRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 ++Y D PW L K DR +TVLY VE I A LL+ ++P+ KI Sbjct: 423 NKYIDETMPWALAKEEDKKDRLNTVLYNLVESIIIGATLLEPYMPETTEKIM 474 >gi|19704603|ref|NP_604165.1| methionyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|25009363|sp|Q8RE57|SYM_FUSNN RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|19714899|gb|AAL95464.1| Methionyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 636 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 211/514 (41%), Positives = 317/514 (61%), Gaps = 13/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++ST I Y N PH+G AY I ADV+ R+++ G+D F TG DEHGQK+ +AA+ Sbjct: 2 KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFVTGLDEHGQKVEQAAK 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + + D+ + NF++M LDI YDDFIRTTE RH + + ++ KGDIYKG Sbjct: 62 QNGFTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDIVNAKGDIYKGE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + E ++ ++++ G++ + V ++EE YFF++S Y D LL + + H Sbjct: 122 YEGKYCVSCETFFPENQL-NGSNKCPDCGKDLTV--LKEESYFFKMSKYADALLKHIDEH 178 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FILP RRNEVISF+K GL+DLS+SR TF WGI I P +I YVW DALTNY+T+ G Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIDFAPGHITYVWFDALTNYITSAG 238 Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 + +N + KFW +H+IGKDI+RFHAI WP LLSA + LP + +HG+ +GE Sbjct: 239 F-ENDENKFDKFWNNSRVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV++P + I++ GVDA RY+L+RE G DG Y G+ R+N+DLAN +GNL Sbjct: 298 KMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R++ M K ++G I + D+ I S+ + V++++ + M RAL + + Sbjct: 358 LNRTLGMYKKYFNGTIVSSSTVEPIDDEIKSMFNDVVKDVEKYMYLFEFSRALETIWKFI 417 Query: 422 SEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S +++Y D PW L K +A + V+ + E + ++A L+ ++P+ A KI + L + Sbjct: 418 SRLNKYIDETMPWTLAKNEAKKARLAAVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477 Query: 480 ADE--NRCFQSLDQR--LKPGFMLHKTFDPIFPR 509 + N F + + K G L + PIFPR Sbjct: 478 DKDITNLKFDDIKEWSIFKEGHKLGEA-SPIFPR 510 >gi|296329050|ref|ZP_06871556.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153854|gb|EFG94666.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 636 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 211/514 (41%), Positives = 317/514 (61%), Gaps = 13/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++ST I Y N PH+G AY I ADV+ R+++ G+D F TG DEHGQK+ +AA+ Sbjct: 2 KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFVTGLDEHGQKVEQAAK 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + + D+ + NF++M LDI YDDFIRTTE RH + + ++ KGDIYKG Sbjct: 62 QNGFTPQAWTDKMTPNFKNMWTALDIKYDDFIRTTEDRHKKAVKRILDIVNAKGDIYKGE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + E ++ ++++ G++ + V ++EE YFF++S Y D LL + + H Sbjct: 122 YEGKYCVSCETFFPENQL-NGSNKCPDCGKDLTV--LKEESYFFKMSKYADALLKHIDEH 178 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FILP RRNEVISF+K GL+DLS+SR TF WGI I P +I YVW DALTNY+T+ G Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIDFAPGHITYVWFDALTNYITSAG 238 Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 + +N + KFW +H+IGKDI+RFHAI WP LLSA + LP + +HG+ +GE Sbjct: 239 F-ENDENKFDKFWNNSRVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV++P + I++ GVDA RY+L+RE G DG Y G+ R+N+DLAN +GNL Sbjct: 298 KMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R++ M K ++G I + D+ I S+ + V++++ + M RAL + + Sbjct: 358 LNRTLGMYKKYFNGTIVSSSTAEPIDDEIKSMFNDVVKDVEKYMYLFEFSRALETIWKFI 417 Query: 422 SEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S +++Y D PW L K +A + V+ + E + ++A L+ ++P+ A KI + L + Sbjct: 418 SRLNKYIDETMPWTLAKNEAKKARLAAVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477 Query: 480 ADE--NRCFQSLDQR--LKPGFMLHKTFDPIFPR 509 + N F + + K G L + PIFPR Sbjct: 478 DKDITNLKFDDIKEWSIFKEGHKLGEA-SPIFPR 510 >gi|269796313|ref|YP_003315768.1| methionyl-tRNA synthetase [Sanguibacter keddieii DSM 10542] gi|269098498|gb|ACZ22934.1| methionyl-tRNA synthetase [Sanguibacter keddieii DSM 10542] Length = 546 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 205/493 (41%), Positives = 295/493 (59%), Gaps = 21/493 (4%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + Y++T I Y N PHIGHAY + DVL R+HR V F TGTDEHGQK+ + A+ Sbjct: 13 QSFYLTTPIYYVNDAPHIGHAYTTVAGDVLTRWHRQRQERVWFLTGTDEHGQKVMRTAEA 72 Query: 65 AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT + + D+ ++ + + LD DDFIRTT+ RH + + + + DKG+IY G Sbjct: 73 NGVTPQEWADRLVESSWEPVLETLDARNDDFIRTTQPRHTERVQRFIQDLHDKGEIYAGS 132 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLS 178 Y G Y + E Y E+ G G+Y + PV+ + E+ YFF++SAY D+LL+ Sbjct: 133 YEGPYCVGCEEYKLPGELLDGT-GEYEGLKLCPIHSRPVEMLSEQNYFFKMSAYADRLLA 191 Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 YE HPEF+ P RNEV++FVK GL+DLS+SR TFDWGI IP D +++YVW DAL NY Sbjct: 192 LYEEHPEFVQPASARNEVLAFVKGGLQDLSISRNTFDWGIPIPWDTSHVLYVWFDALLNY 251 Query: 239 LTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 T G + + + +F WPAD+H++GKDILRFHA+ WPA L++A LPLPK VF+HG+ Sbjct: 252 ATAIGLDSDDEAERERFASTWPADVHLVGKDILRFHAVIWPAMLMAAGLPLPKTVFAHGW 311 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L GEK+SKS I P ++ + G DA RY+ +R I G+DG + + L R NA+LA Sbjct: 312 LLVGGEKMSKSKLTGIAPTQITDVFGSDAFRYYFMRAIPFGQDGSFSWEDLSARYNAELA 371 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 NG GNL SR +MI K++ G +P PG+ +++ ++ V ++ + E + + A+ Sbjct: 372 NGFGNLASRVAAMISKNFGGSLPRPGSSGDAETALQQVAAKAVAEAEAAIDRISPNEAIN 431 Query: 416 QVISLVSEVDRYFDAQKPWELKK-----------TNPDRASTVLYVTVEVIRQLAILLQA 464 V +LV + Y Q+PW++ K R +T+L E +R LA+LL Sbjct: 432 AVWALVDATNLYLTEQEPWKVAKLPGETTESGAGVEGGRLATILVTAAEALRTLAVLLNP 491 Query: 465 FVPKLANKIFDIL 477 VPK A ++ L Sbjct: 492 VVPKAAEGLWTAL 504 >gi|260889017|ref|ZP_05900280.1| methionine--tRNA ligase [Leptotrichia hofstadii F0254] gi|260861077|gb|EEX75577.1| methionine--tRNA ligase [Leptotrichia hofstadii F0254] Length = 633 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 213/513 (41%), Positives = 322/513 (62%), Gaps = 18/513 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YPNA PH+G AY II DV+AR+ RL G +V F TG DEHGQKI +AA+ G Sbjct: 5 FYITTPIYYPNAAPHVGTAYTTIICDVVARYKRLTGEEVGFMTGVDEHGQKIQEAAEKNG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + +VD+ S NF + + L+IS DF+RTT++RH T R + K++ DKGDIY+G Y G Sbjct: 65 FTPQQWVDKMSLNFTTLWEKLNISNTDFLRTTQERHLKTVREIIKRVHDKGDIYRGEYVG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 YS+ +E + ++++ DG+Y + V+ E YFF+LS Y++ LL + E +P+F Sbjct: 125 KYSVSEETFVPENQL---VDGKYMGKEVIDVK---ETSYFFKLSKYENALLEHIEKNPDF 178 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P ++NEVI+F++ GL+DLS+SR TFDWGI + + +I+YVW DAL YLT G+ Sbjct: 179 IKPEGKKNEVIAFIRQGLQDLSISRTTFDWGIPLELEEGHIIYVWFDALNIYLTGAGFST 238 Query: 247 NPDGSKAKFWPADL--HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + + KFW HV+GKDILRFHAI WPA L+SA + LP + +HG+ +GEK+S Sbjct: 239 DTEQFD-KFWTNGTVNHVVGKDILRFHAIIWPAMLMSAGIKLPDTIAAHGWWTVEGEKMS 297 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSLGNV++P E +E+ G+DA RY+L+RE G+D Y K + +R+NADLAN +GNL++R Sbjct: 298 KSLGNVVNPEEEVEKYGLDAFRYYLMREATFGQDADYSKKAMVQRINADLANDLGNLLNR 357 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 ++ M K ++ + D I + L ++ +++ N AL + +S + Sbjct: 358 TIGMQKKYFNSEVMLNEVEENFDIEIKELWKNTLVDLDKHVNNYQFSEALKDIWKFISRM 417 Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++Y D +PW+L K + DR STV+Y V+ + ++A+L+ F+P+ A K+ + L + D+ Sbjct: 418 NKYIDECEPWKLSKDESRKDRLSTVMYNLVDSLYKIAVLISPFMPETAQKMINQLGL-DK 476 Query: 483 NRCFQSLD-----QRLKPGFMLHKTFDPIFPRF 510 + LD + G L++ P+FPR Sbjct: 477 DVTKLHLDDIREWKSYPAGNKLNEAV-PLFPRI 508 >gi|160893725|ref|ZP_02074509.1| hypothetical protein CLOL250_01279 [Clostridium sp. L2-50] gi|156864710|gb|EDO58141.1| hypothetical protein CLOL250_01279 [Clostridium sp. L2-50] Length = 678 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 206/478 (43%), Positives = 308/478 (64%), Gaps = 9/478 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI A Sbjct: 7 YITTAIAYASGKPHIGNTYEIVLADSIARYKRFAGYDVRFQTGTDEHGQKIENKAFENMQ 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K FVD+ S +D+ D+++ SYD FIRTT+ H + +++K+ D+GDIYKG Y G Sbjct: 67 TPKEFVDEISGEIKDIWDLMNTSYDKFIRTTDADHERQVQKIFRKLYDQGDIYKGEYVGK 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ D ++ DG+ + PVQ +EE YFF+LS YQD+L+ + E +P+FI Sbjct: 127 YCTPCESFFTDSQL---VDGKCPDCGR-PVQEAKEEAYFFKLSKYQDRLMKHIEQNPDFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-L 245 P R+NE+I+ F+K GL+DL +SR +F WGI + D ++++YVWIDAL+NY+T GY + Sbjct: 183 QPESRKNEMINNFIKPGLQDLCVSRTSFKWGIPVDFDDKHVIYVWIDALSNYITGLGYDV 242 Query: 246 D-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D N D K+WPADLH+IGKDILRFH IYWP L++ +PLPK++F H +++ K+S Sbjct: 243 DGNNDELYKKYWPADLHLIGKDILRFHTIYWPIMLMALGVPLPKQIFGHPWLIQNDGKMS 302 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+ +++ GVDA+R+F++ E+ DG + + +R+N++LAN +GNLV+R Sbjct: 303 KSKGNVMYADDMVRLFGVDAVRFFVLHEMPFENDGIISWELVVERINSELANTLGNLVNR 362 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 ++SM K + G++ G E DE + +V ++ E M + A++++ +L Sbjct: 363 TISMSNKYFGGVVTNTGVTEEVDEDLKNVVLNCRIKVAECMDKLKVADAISEIFTLFKRC 422 Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++Y D PW L K T DR +TVLY VE I A LL+ ++P + KI + L A Sbjct: 423 NKYIDETMPWALAKDETKQDRLNTVLYNLVESIVIGASLLEPYMPDTSVKILNQLNAA 480 >gi|163814866|ref|ZP_02206254.1| hypothetical protein COPEUT_01017 [Coprococcus eutactus ATCC 27759] gi|158449805|gb|EDP26800.1| hypothetical protein COPEUT_01017 [Coprococcus eutactus ATCC 27759] Length = 678 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 204/472 (43%), Positives = 300/472 (63%), Gaps = 9/472 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAIAY + +PHIG+ YE+++AD +AR+ R G DV F TGTDEHGQKI A Sbjct: 7 YITTAIAYASGKPHIGNTYEIVLADSIARYKRFAGYDVRFMTGTDEHGQKIENKAFENMQ 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K FVD+ S + + D+++ SYD FIRTT+ H + ++KK+ D+GDIYKG Y G Sbjct: 67 TPKEFVDETSGEIKRIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYKGHYVGK 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ D ++ DG+ + PVQ +EE YFF++S YQDKL+ + E HPEFI Sbjct: 127 YCTPCESFFTDGQL---IDGKCPDCGR-PVQEAKEEAYFFKMSKYQDKLMKHIEQHPEFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-L 245 P RRNE+++ F+K GL+DL +SR +F WGI + DP++++YVW+DAL+NY+T GY + Sbjct: 183 QPESRRNEMVNNFLKPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWVDALSNYITGLGYDV 242 Query: 246 DNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D K K+WPADLH+IGKDILRFH IYWP L++ LPLPK+VF H +++ K+S Sbjct: 243 DGKSDEKFYKYWPADLHLIGKDILRFHTIYWPIMLMALGLPLPKQVFGHPWLIQSDGKMS 302 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+ ++++ GVDA+R+F++ E+ DG + + +R+N++LAN +GNLV+R Sbjct: 303 KSKGNVMYADDMVDIFGVDAVRFFVLHEMPFENDGVISWELMVERLNSELANTLGNLVNR 362 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 ++SM K + G++ DE + V ++ E M + A+ ++ +L Sbjct: 363 TISMSNKYFGGIVTNTNVTEPVDEDLKKVVMDCRYKVAECMDKLKVADAITEIFALFKRC 422 Query: 425 DRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 ++Y D PW L K DR +TVLY VE I A LL+ ++P+ KI Sbjct: 423 NKYIDETMPWALAKEEDKKDRLNTVLYNLVESIIIGATLLEPYMPETTEKIM 474 >gi|238917941|ref|YP_002931458.1| methionyl-tRNA synthetase [Eubacterium eligens ATCC 27750] gi|238873301|gb|ACR73011.1| methionyl-tRNA synthetase [Eubacterium eligens ATCC 27750] Length = 657 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 204/492 (41%), Positives = 313/492 (63%), Gaps = 14/492 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI A+ AG Sbjct: 8 FYMTTAIAYTSGKPHIGNTYEIVLADSIARFRRQEGYDVFFQTGTDEHGQKIELKAEEAG 67 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T K FVD S + + D+++ SYD FIRTT+ H + ++KK+ D+GDIYKG Y G Sbjct: 68 ITPKEFVDNVSTEIKRIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYKGSYEG 127 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y E+++ + ++ DG+ + V+ +EE YFF++S Y +KL+ + +HPEF Sbjct: 128 MYCTPCESFWTESQL---VDGKCPDCGRE-VKPAKEEAYFFKMSKYANKLIEHINTHPEF 183 Query: 187 ILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 I P+ R+NE++ +F+ GL+DL +SR +F WGI + D ++++YVW+DALTNY+T GY Sbjct: 184 IQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYITGIGY- 242 Query: 246 DNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 + DG+ + KFWPADLH+IGKDI+RFH IYWP FL++ PLPK+VF H ++L Sbjct: 243 -DADGNSSEQYKKFWPADLHLIGKDIIRFHTIYWPIFLMALGEPLPKQVFGHPWLLQNDG 301 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNVI ++++ GVDA+RYF++ E+ DG + + +R+N+DLAN +GNL Sbjct: 302 KMSKSKGNVIYADDLVDLFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTLGNL 361 Query: 362 VSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 V+R+++M K + G++ G + D + +V + +++ M + A+ +V +L Sbjct: 362 VNRTIAMSNKYFGGVVNKTGVEDAAIDGDLKAVVTATRDKVQAKMATLHVADAITEVFTL 421 Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 ++Y D PW L K DR + VLY VE I A LL++F+P+ +KI L+ Sbjct: 422 FKRCNKYIDETMPWALAKDEAQQDRLAEVLYNLVESITIGANLLKSFMPETTDKILAQLY 481 Query: 479 VADENRCFQSLD 490 A+ + D Sbjct: 482 PANPEAGVRDFD 493 >gi|81429270|ref|YP_396271.1| methionyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] gi|78610913|emb|CAI55965.1| Methionyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] Length = 681 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 207/519 (39%), Positives = 318/519 (61%), Gaps = 11/519 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ Y++T I YP+ + IG++Y I ADV+AR+ RL G DV F TGTDEHG K+ + A Sbjct: 4 KKPTFYVTTPIYYPSGKLTIGNSYTTIAADVIARYKRLMGFDVFFLTGTDEHGLKLEQKA 63 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + + +VD + + + L+IS D FIRTT+ H + ++ ++ ++GDIY G Sbjct: 64 AEKNLAPQAYVDGMAEEIQALWKTLEISNDKFIRTTDDYHVKAVQKIFDRLVEQGDIYLG 123 Query: 123 CYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDKL 176 Y GWYS+ DE Y+ + EVYK +G+ + + VQ + EE Y F++S Y D+L Sbjct: 124 QYEGWYSVSDEEYFTESQLTEVYKDENGKVIGGKAPSGHEVQRVAEETYKFKMSKYADRL 183 Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 L+YYE H +FI P R+NE+I+ F+K GL+DLS+SR +FDWGI + +P++++YVW+DAL Sbjct: 184 LAYYEEHADFIEPSSRKNEMINNFIKPGLEDLSVSRISFDWGIHVTGNPKHVVYVWLDAL 243 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 +NY+T GY + D K+WPAD+H++GK+I+RFHAIYWP FL++ LPLPK++F HG+ Sbjct: 244 SNYITALGYGSDDDQLFNKYWPADVHLVGKEIVRFHAIYWPIFLMALGLPLPKQIFGHGW 303 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L K K+SKS GNV+ P ++E G+DALRY+L+R I G DG + + R+N DLA Sbjct: 304 LLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRAIPFGNDGVFTPEDFVSRINYDLA 363 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K DG +P+ A T D + + ++ + + M AL Sbjct: 364 NDLGNLLNRTVAMINKYDDGHVPSYQADVTAFDADLQATATQTIAQYSTLMDQLKFSDAL 423 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472 + L+S ++Y D +PW L K + +A +VL E +R +A+LLQ + + Sbjct: 424 DTIWQLISRANKYIDETEPWVLAKDDSRKAELDSVLAHLAESLRIVALLLQPVMTHAPRE 483 Query: 473 IFDILFVA-DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 +F L + D+ + + R + PIFPR Sbjct: 484 MFAQLGLDFDQEAQREMVYGRFPSDIKVIAKGTPIFPRL 522 >gi|326693554|ref|ZP_08230559.1| methionyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773] Length = 702 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 211/523 (40%), Positives = 320/523 (61%), Gaps = 15/523 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +K+ + YI+T I YP+ + +G+ Y ++AD AR+HRL G DV F TGTDEHG KI + Sbjct: 33 VKKDQTFYITTPIYYPSGKLQLGNTYTTVLADAAARYHRLLGEDVFFLTGTDEHGLKIQQ 92 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AGV+ ++D + + + ++DISYDDFIRTTE RH + ++ + +KGDIY Sbjct: 93 KAKAAGVSEIAYLDGMAEQIKALWQLMDISYDDFIRTTEPRHEKAVQKIFTTLLEKGDIY 152 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 KG Y GWYS+ DE Y+ + EVY+ +GQ + + V+ ++EE YFF++S Y D Sbjct: 153 KGEYEGWYSVSDEEYFTESQLAEVYRDENGQVTGGKAPSGHEVELVKEEAYFFKMSKYAD 212 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 LL YY++HPEFI P R NE+I+ F+ GL+DL+++R DWGI +P D ++++YVWID Sbjct: 213 WLLDYYKTHPEFIQPEARMNEMINNFIAPGLEDLAVTRTAVDWGIPVPGDEKHVIYVWID 272 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + K WPA++ ++GK+I+RFH IYWP L + + LPK + H Sbjct: 273 ALSNYITALGYDTDDTALFDKLWPANVQLVGKEIVRFHTIYWPIMLHALGIDLPKTIIGH 332 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 G+++ K K+SKS GNVI P EV+EE G+DA+RY+L+R + G DG + + RVN Sbjct: 333 GWLVMKDGKMSKSKGNVIYP-EVLEERYGLDAVRYYLLRAMPFGNDGVFTPEDFVARVNF 391 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN +GNL++R+V+MI K +G++P T+ DE ++ + + ++ Q Sbjct: 392 DLANDLGNLLNRTVAMINKYENGIVPELHTGKTDFDEGLVQTIEVAIVDYNKHFQAMRTA 451 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469 AL V +++ ++Y D +PW L K +A S V+ +R A+LLQ + + Sbjct: 452 DALESVWTIIRRANKYIDETQPWVLAKDETQKAVLSNVMAHLAGALRVAAVLLQPVLTQA 511 Query: 470 ANKIFDIL-FVADEN--RCFQSLDQRLKPGFMLHKTFDPIFPR 509 KI++ L F EN + +L G + K +PIFPR Sbjct: 512 PKKIYEQLGFDYPENGVKIAGLTFGKLPTGGQVVKKGEPIFPR 554 >gi|237838135|ref|XP_002368365.1| methionyl-tRNA synthetase, putative [Toxoplasma gondii ME49] gi|211966029|gb|EEB01225.1| methionyl-tRNA synthetase, putative [Toxoplasma gondii ME49] Length = 976 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 203/488 (41%), Positives = 295/488 (60%), Gaps = 20/488 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++REK YI+TAI Y N PH+GH YE++ +D LARFHR+ G DV F TGTDEHGQKIA Sbjct: 273 RQREKFYITTAINYTNGPPHMGHVYEIVTSDALARFHRIAGRDVFFLTGTDEHGQKIANT 332 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G T + D + F+ M L +S D +IRTT+ H C+ LWK++ ++GDIY Sbjct: 333 AERLGKTPQEICDFYAAGFQAMNAKLCVSNDQYIRTTQAAHKAVCQWLWKRVQERGDIYL 392 Query: 122 GCYSGWYSLRDEAYYNDDEV----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY+ R+E + ++ E YK P+Q MEE YFFR+S YQ +L+ Sbjct: 393 DTYVGWYNEREETFVSESEARLTDYKDP------TTGKPLQKMEEPSYFFRMSKYQARLV 446 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237 + +P+FI P ERR ++ ++ L DLS SR TF WG+ +P D +++MYVW DALTN Sbjct: 447 KHINENPDFIRPEERRKNILKRLEEPLLDLSCSRTTFSWGVPVPGDEKHVMYVWFDALTN 506 Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 Y + T + N DG++A FWPAD+H+IGKDI+ FH + WP L++A+LPLPK VF HGF+ Sbjct: 507 YYSAT--VMN-DGARASFWPADVHIIGKDIVWFHTVIWPCMLMAADLPLPKCVFGHGFVT 563 Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 GEK+SKSLGNV+DP ++++ D+ R++LVRE G D +D+D L NA+LA+ Sbjct: 564 AADGEKMSKSLGNVVDPNDILQAHDADSFRFYLVRETKFGSDLRFDEDALTATTNAELAD 623 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415 +GNLV R+ S+ +K +G +P P + ++ S+ V + E + Q + AL Sbjct: 624 TLGNLVHRATSLCVKFCEGKVP-PVSLPAEGKAPFSIPDTVGE--MERLVGQFGLREALE 680 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 ++ E +++ PW L T+ V+ +E + L LL+ F+P A+ IF Sbjct: 681 VAMNACREANKFLTDWAPWSL--TDSTEKQRVVRGALEAVFVLGHLLEPFIPVTADHIFK 738 Query: 476 ILFVADEN 483 L A + Sbjct: 739 KLNTAPKT 746 >gi|221484363|gb|EEE22659.1| methionyl-tRNA synthetase, putative [Toxoplasma gondii GT1] Length = 976 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 203/488 (41%), Positives = 295/488 (60%), Gaps = 20/488 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++REK YI+TAI Y N PH+GH YE++ +D LARFHR+ G DV F TGTDEHGQKIA Sbjct: 273 RQREKFYITTAINYTNGPPHMGHVYEIVTSDALARFHRIAGRDVFFLTGTDEHGQKIANT 332 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G T + D + F+ M L +S D +IRTT+ H C+ LWK++ ++GDIY Sbjct: 333 AERLGKTPQEICDFYAAGFQAMNAKLCVSNDQYIRTTQAAHKAVCQWLWKRVQERGDIYL 392 Query: 122 GCYSGWYSLRDEAYYNDDEV----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY+ R+E + ++ E YK P+Q MEE YFFR+S YQ +L+ Sbjct: 393 DTYVGWYNEREETFVSESEARLTDYKDP------TTGKPLQKMEEPSYFFRMSKYQARLV 446 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237 + +P+FI P ERR ++ ++ L DLS SR TF WG+ +P D +++MYVW DALTN Sbjct: 447 KHINENPDFIRPEERRKNILKRLEEPLLDLSCSRTTFSWGVPVPGDEKHVMYVWFDALTN 506 Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 Y + T + N DG++A FWPAD+H+IGKDI+ FH + WP L++A+LPLPK VF HGF+ Sbjct: 507 YYSAT--VMN-DGARASFWPADVHIIGKDIVWFHTVIWPCMLMAADLPLPKCVFGHGFVT 563 Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 GEK+SKSLGNV+DP ++++ D+ R++LVRE G D +D+D L NA+LA+ Sbjct: 564 AADGEKMSKSLGNVVDPNDILQAHDADSFRFYLVRETKFGSDLRFDEDALTATTNAELAD 623 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415 +GNLV R+ S+ +K +G +P P + ++ S+ V + E + Q + AL Sbjct: 624 TLGNLVHRATSLCVKFCEGKVP-PVSLPAEGKAPFSIPDTVGE--MERLVGQFGLREALE 680 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 ++ E +++ PW L T+ V+ +E + L LL+ F+P A+ IF Sbjct: 681 VAMNACREANKFLTDWAPWSL--TDSTEKQRVVRGALEAVFVLGHLLEPFIPVTADHIFK 738 Query: 476 ILFVADEN 483 L A + Sbjct: 739 KLNTAPKT 746 >gi|221505659|gb|EEE31304.1| methionyl-tRNA synthetase, putative [Toxoplasma gondii VEG] Length = 976 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 203/488 (41%), Positives = 295/488 (60%), Gaps = 20/488 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++REK YI+TAI Y N PH+GH YE++ +D LARFHR+ G DV F TGTDEHGQKIA Sbjct: 273 RQREKFYITTAINYTNGPPHMGHVYEIVTSDALARFHRIAGRDVFFLTGTDEHGQKIANT 332 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G T + D + F+ M L +S D +IRTT+ H C+ LWK++ ++GDIY Sbjct: 333 AERLGKTPQEICDFYAAGFQAMNAKLCVSNDQYIRTTQAAHKAVCQWLWKRVQERGDIYL 392 Query: 122 GCYSGWYSLRDEAYYNDDEV----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY+ R+E + ++ E YK P+Q MEE YFFR+S YQ +L+ Sbjct: 393 DTYIGWYNEREETFVSESEARLTDYKDP------TTGKPLQKMEEPSYFFRMSKYQARLV 446 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237 + +P+FI P ERR ++ ++ L DLS SR TF WG+ +P D +++MYVW DALTN Sbjct: 447 KHINENPDFIRPEERRKNILKRLEEPLLDLSCSRTTFSWGVPVPGDEKHVMYVWFDALTN 506 Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 Y + T + N DG++A FWPAD+H+IGKDI+ FH + WP L++A+LPLPK VF HGF+ Sbjct: 507 YYSAT--VMN-DGARASFWPADVHIIGKDIVWFHTVIWPCMLMAADLPLPKCVFGHGFVT 563 Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 GEK+SKSLGNV+DP ++++ D+ R++LVRE G D +D+D L NA+LA+ Sbjct: 564 AADGEKMSKSLGNVVDPNDILQAHDADSFRFYLVRETKFGSDLRFDEDALTATTNAELAD 623 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415 +GNLV R+ S+ +K +G +P P + ++ S+ V + E + Q + AL Sbjct: 624 TLGNLVHRATSLCVKFCEGKVP-PVSLPAEGKAPFSIPDTVGE--MERLVGQFGLREALE 680 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 ++ E +++ PW L T+ V+ +E + L LL+ F+P A+ IF Sbjct: 681 VAMNACREANKFLTDWAPWSL--TDSTEKQRVVRGALEAVFVLGHLLEPFIPVTADHIFK 738 Query: 476 ILFVADEN 483 L A + Sbjct: 739 KLNTAPKT 746 >gi|295106117|emb|CBL03660.1| methionyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b] Length = 531 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 213/519 (41%), Positives = 294/519 (56%), Gaps = 22/519 (4%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 +T I Y NA PH+G AY I AD +AR+ R++G DV F TG DEHGQK+A A G+T Sbjct: 8 FTTPIYYVNAAPHLGTAYTTIAADTVARYQRMNGYDVAFVTGMDEHGQKVADTAAAKGMT 67 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + + D FRD D+L I+Y DF+RTTE RH + + W+++ DKG YKG Y GWY Sbjct: 68 PQDWCDSMEPAFRDAWDMLGITYTDFVRTTEPRHAKSVQKFWQELYDKGWCYKGSYEGWY 127 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWM-EEEGYFFRLSAYQDKLLSYYESHPEF 186 + +E YY + ++ K +GQ PVQ EE +FF+LS + DKLL++YE +P+F Sbjct: 128 CVHEETYYAESDLEKNDEGQLVCPDCKRPVQKAGGEENWFFKLSEFGDKLLAFYEENPDF 187 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P R+NE++SFVKSGLKDLS+SR TFDWG+ +P D ++ YVW DAL YLT GY D Sbjct: 188 IRPETRKNEIVSFVKSGLKDLSISRSTFDWGVPLPFDEGHVAYVWADALLAYLTGIGYGD 247 Query: 247 NPD--GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + G + WP H +GKDI RFH + WPA LL+A +P+ VF HGF+L KGEK+S Sbjct: 248 EGERAGEFDRRWPMQYHFVGKDITRFHCVIWPAMLLAAGMPITHTVFGHGFLLTKGEKMS 307 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GN + P ++ GVDA RY+ + ++ G DG + + + NADLAN GNL SR Sbjct: 308 KSKGNALKPADLCRVFGVDAYRYYFMSDVQFGADGSISMERMVQVYNADLANTWGNLCSR 367 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL--------IHRALAQ 416 +M K +DG +P A + V + L+EI E + + A A Sbjct: 368 VFNMTKKYFDGQVPEVPA-----SAAALVGANPLREITEELYAEYDRALGDVDFTAAAAT 422 Query: 417 VISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 V L V+ Y + PW L K D + V+Y +E IR +A+ L F+P + ++F Sbjct: 423 VQKLAGRVNLYVEESAPWNLAKNEETADELAAVIYNALEAIRIIALYLAPFMPNTSAEVF 482 Query: 475 DILFVADENRCF---QSLDQRLKPGFMLHKTFDPIFPRF 510 L + D + P + DP+FPR Sbjct: 483 RRLSLGDITAVTDIEAATAWGQLPAGNAVEIGDPLFPRL 521 >gi|91202480|emb|CAJ72119.1| strongly similar to methionyl-tRNA synthetase [Candidatus Kuenenia stuttgartiensis] Length = 520 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 205/510 (40%), Positives = 315/510 (61%), Gaps = 14/510 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+ Y++T I Y N PHIGH+Y I ADVLAR+ RL DV F TG+DEHGQKI KAA+ Sbjct: 3 RQSFYLTTPIYYVNDIPHIGHSYTTIAADVLARYRRLQQYDVFFLTGSDEHGQKIQKAAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 T FVD F+D+ + L+IS DDFIRTT++RH + +++K+ + GDIY G Sbjct: 63 ACNKTPNDFVDMVVGKFKDLWENLNISNDDFIRTTDERHVKRVKKIFQKLFENGDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + E+++ + ++ +G+ + N V+ ++E+ YFFRLS YQ L+ +Y+ H Sbjct: 123 YEGRYCVPCESFWTETQL---DEGRCPECRRN-VEKVKEKNYFFRLSKYQKPLIEHYDKH 178 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 PEFI P RRNE++ + S ++D+S+SR WGI++P D +YVWIDAL NY+T G Sbjct: 179 PEFIQPESRRNEILQRITSHIEDISISRSAVTWGIQVPMDTTQTIYVWIDALLNYITALG 238 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D+ + + K+WPA++H+IGK+IL FH WPA L+S + LP K+F+HG+ +G+KI Sbjct: 239 YDDDMELFQ-KYWPANVHIIGKEILWFHGAIWPAILMSLKIELPFKIFTHGWWTIEGQKI 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGN IDP+ +I+ G DA RYF++RE+ G DG + L R+N+DL N +GNL+ Sbjct: 298 SKSLGNAIDPLNIIQIYGTDAYRYFILREVPFGSDGNFSYTALTNRINSDLGNDLGNLLQ 357 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+++MI K +D +IP ++E D+ + + L +I + + N +AL + V Sbjct: 358 RTLTMIEKYFDAVIP---EYSEKDDVLKEISQNTLSKINKELDNLQFSKALEAIWEFVGS 414 Query: 424 VDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++ + +KPW L KT+ + V+ + I+ ++I++ F+P +I L + + Sbjct: 415 ANKCIEEKKPWVLAKTSAYKPQLKNVISSLAKAIKDISIVIYPFMPNTCIEIQKQLGILE 474 Query: 482 ENR--CFQSLDQRLKPGFMLHKTFDPIFPR 509 N C + Q +K G ++ K P+FPR Sbjct: 475 NNESPCLE-YQQIIKSGVIVKKG-KPLFPR 502 >gi|323351085|ref|ZP_08086742.1| methionine--tRNA ligase [Streptococcus sanguinis VMC66] gi|322122809|gb|EFX94518.1| methionine--tRNA ligase [Streptococcus sanguinis VMC66] Length = 679 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 201/521 (38%), Positives = 319/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 15 MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 74 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG++ + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 75 KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 134 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ +G+ + V+W+ EE YF RLS YQD Sbjct: 135 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 194 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 195 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVIYVWID 254 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 255 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 314 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + R+N Sbjct: 315 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 374 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG +PT T+ D ++ V ++ + + ++M Sbjct: 375 ELANDLGNLLNRTVSMINKYFDGQVPTYEENVTDFDGALAQVAAQSIADYYKHMDAVDYP 434 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K + + V+ V +R +A +++ F+ + Sbjct: 435 RALEAVWTLISRTNKYIDETAPWVLAKDDSKVKELAAVMSHLVASLRVVAHMIEPFMMET 494 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L + +L G + + PIFPR Sbjct: 495 SKAVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 535 >gi|242309749|ref|ZP_04808904.1| methionyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] gi|239523750|gb|EEQ63616.1| methionyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] Length = 643 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 210/477 (44%), Positives = 305/477 (63%), Gaps = 9/477 (1%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I Y N PHIGHAY IIAD LARFHRL G +VLF TGTDEHGQKI ++AQ Sbjct: 4 KFYITTPIYYVNDIPHIGHAYTTIIADTLARFHRLLGDEVLFLTGTDEHGQKIQQSAQKN 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G K +VD+ S FR++ D I YD FIRTT+ H +T + ++ K+ KGDIYKG Y Sbjct: 64 GKNPKEYVDEISSRFRNLWDSFGIGYDWFIRTTDSYHKETAQNVFLKMFQKGDIYKGEYE 123 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y + E+++ ++ + + N ++EE YFFRLSAY D+LL + E +PE Sbjct: 124 GNYCVSCESFFAKSQLIEQKKCPDCGKETN---LLKEESYFFRLSAYGDRLLQWIEQNPE 180 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTT 242 ILP RRNEVI+F+K GL+DLS++R +FDWGIK+P+ D +++MYVW+DAL NYL+ Sbjct: 181 CILPKMRRNEVINFIKEGLEDLSITRTSFDWGIKLPNEIGDSKFVMYVWLDALVNYLSAL 240 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY +N + +K FWPA+ H++GKDILRFHA+YWPAFL+S LPLPK + +HG+ G K Sbjct: 241 GYQNNLE-NKMDFWPANYHLVGKDILRFHAVYWPAFLMSLELPLPKHIAAHGWWTKDGAK 299 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNV++P EV+E G+D RYF++RE+ G+DG + + L +R NADL N +GNL+ Sbjct: 300 MSKSIGNVVNPKEVVESYGIDCFRYFVLREVPFGQDGDFSQKALIERFNADLGNDLGNLL 359 Query: 363 SRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 +R + M K +D + ++ + + + +L + + MQ I+R L ++ L Sbjct: 360 NRLLGMSAKYFDNTLNVDLESYQNAYKMEIEEIKAILGNLNKMMQEVQINRYLEELWRLF 419 Query: 422 SEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + ++PW+L K N + +L ++ + A+ L +P+ A KI + Sbjct: 420 NLANGIIAKKEPWKLIKENKQAEVAELLIFVANLLIKGALCLYPCMPESAKKIMSVF 476 >gi|162447002|ref|YP_001620134.1| methionyl-tRNA synthetase [Acholeplasma laidlawii PG-8A] gi|161985109|gb|ABX80758.1| methionyl-tRNA synthetase [Acholeplasma laidlawii PG-8A] Length = 516 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 209/478 (43%), Positives = 314/478 (65%), Gaps = 8/478 (1%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++K YISTAIAY +A PHIG+ YE+I+AD +ARF RL+G DV F TGTDEHGQKI A Sbjct: 2 DKKKYYISTAIAYASAIPHIGNVYEIILADAIARFKRLEGYDVYFQTGTDEHGQKIENNA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 +N + T +VD S + + +++++ YD FIRTT+ H + + +++K+ ++GDIY G Sbjct: 62 RNQNLETSDYVDMISNEIKRIFELVNVKYDKFIRTTDTYHKEVVQNIFEKLLEQGDIYLG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWYS+ DEA+ N ++ G + PV WM E+ YFF+LS YQD+++ + + Sbjct: 122 KYEGWYSVADEAFLNKADIVDGLAP----SGDIPV-WMSEDTYFFKLSKYQDRIVKHIKD 176 Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +P FI P RRNEV+ SF+ L DLS+SR +F WGI + +P++++YVWIDAL+NY+T Sbjct: 177 NPSFIEPENRRNEVLQSFLSEKLPDLSVSRTSFKWGIPVKSNPEHVIYVWIDALSNYITG 236 Query: 242 TGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY LD+ + FWPADLH+IGKDI+RFHA+YWPA LL+ LPLPKK+F H ++L Sbjct: 237 LGYNLDSNSDAMKDFWPADLHLIGKDIMRFHAVYWPALLLALGLPLPKKIFGHPWVLVDK 296 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKS+GN + +++ GVDALRY+++ EI DG + + +R N+DLAN +GN Sbjct: 297 NKMSKSVGNTLYTDNLVKHFGVDALRYYVLHEIPFAADGNITYELMIERNNSDLANTLGN 356 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 LV+R++ M+ K +G++ D S+ + C +L ++ M + A+ +++ + Sbjct: 357 LVNRTIGMVNKYQNGLVKKVIINEPFDYSLKNKCEALLDKVSTLMNELRVGDAIEELMIV 416 Query: 421 VSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++Y D +PW L K ++ S VLY VE IR LA+ LQ+++P+ A KIF+ L Sbjct: 417 ARAANKYIDLSEPWNLNKNGETEKLSHVLYSLVETIRFLAVFLQSYMPETALKIFEQL 474 >gi|152990541|ref|YP_001356263.1| methionyl-tRNA synthetase [Nitratiruptor sp. SB155-2] gi|151422402|dbj|BAF69906.1| methionyl-tRNA synthetase [Nitratiruptor sp. SB155-2] Length = 632 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 212/518 (40%), Positives = 313/518 (60%), Gaps = 27/518 (5%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I Y N PHIGHAY IIAD AR+ RL+G D F TGTDEHGQKI +AA+ Sbjct: 2 KKRYITTPIYYVNDVPHIGHAYTTIIADSAARYFRLNGYDTFFLTGTDEHGQKIEEAAKK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G T + + D+ S F+ + D +ISYD FIRTT H + ++K+ +KGDIYKG Y Sbjct: 62 RGKTPQEYADEISAKFKALWDEFEISYDKFIRTTNPEHIIGVQKAFEKMYEKGDIYKGEY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + EA++ + ++ D ++ ++EE YFF+LS YQDKLL Y ++ Sbjct: 122 EGHYCISCEAFFPESQL---IDEEFCPDCGKQTSIVKEESYFFKLSKYQDKLLELYRTND 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 F+LP ++NEVI FV+SGL+DLS++R +FDWGIK+P +DP+++MYVW+DAL NY+T Sbjct: 179 AFVLPKNKKNEVIRFVESGLQDLSITRTSFDWGIKLPKSINDPKHVMYVWLDALLNYITA 238 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY D +WPAD H++GKDILRFHA+YWPAFL+S +LP P + +HG+ GE Sbjct: 239 LGY--GSDEKLMYYWPADFHLVGKDILRFHAVYWPAFLMSLDLPQPHHIATHGWWTRNGE 296 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNVIDP +V + G++ RYFL+RE+ G+DG + + L R+N DL N +GNL Sbjct: 297 KMSKSKGNVIDPKKVADAYGLENFRYFLLREVPFGQDGDFSQKALIDRINNDLGNDLGNL 356 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--QLI-----HRAL 414 ++R + M K +D FT + + + LQEI+ + N L+ +R L Sbjct: 357 LNRIIGMSGKYFD--------FTVDSKDVQKFHQKELQEIQSIIANLDSLVDEMKWNRYL 408 Query: 415 AQVISLVSEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ ++ ++ D PW ++K+ D A ++ + ++ ++A+LL +PK KI Sbjct: 409 EEIWKMLHIANKAIDTYAPWAKMKEGKADEAMALVALVSNILAKVALLLHPVMPKTTQKI 468 Query: 474 FDILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPR 509 + L + F + L F + K P+FP+ Sbjct: 469 AEALGFTIDQSSFDTFIHQSNLLDTFTIQK-IPPLFPK 505 >gi|260655495|ref|ZP_05860983.1| methionine--tRNA ligase [Jonquetella anthropi E3_33 E1] gi|260629943|gb|EEX48137.1| methionine--tRNA ligase [Jonquetella anthropi E3_33 E1] Length = 642 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 219/509 (43%), Positives = 312/509 (61%), Gaps = 8/509 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+T I Y N PHIGHAY I ADV+ARF R+ G DV F TGTDEHGQK+A+AA Sbjct: 3 KSFYITTPIYYVNDIPHIGHAYTTIAADVMARFKRMSGYDVFFLTGTDEHGQKVAQAAAA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV + D S FR++ V+ S DDFIRTT++RH T + +++K+ +GDIYKG Y Sbjct: 63 KGVDPQKLTDGLSEKFRELLPVIGASNDDFIRTTQERHIKTVQAIFQKLLAQGDIYKGTY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + EAY + +G+ P+ MEEE YF R SA+ DKLL++YE++P Sbjct: 123 KGLYCVPCEAYVPES---SAGEGRTCPDCGRPLIEMEEESYFLRTSAWADKLLAFYEANP 179 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P +R NEV+SF++ GLKD S+SR T W I +P D ++ +YVW DAL NYLT GY Sbjct: 180 NAIGPQQRYNEVVSFLRGGLKDQSISRTTVKWAIPVPGDERHTIYVWFDALINYLTACGY 239 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + A FWP H++GKDI+RFH I WP L+ L PK+VFSHG+ +GEK+S Sbjct: 240 GTDQKKMDA-FWPEVNHLVGKDIIRFHCIIWPIMLMMLGLTPPKQVFSHGWWTVEGEKMS 298 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GN ++P E+I G DA RYFL R++ G DG + ++ L K++N+DLAN +GNL+SR Sbjct: 299 KSKGNAVNPHEMIGRYGRDAFRYFLFRQMPFGLDGDFSEEALAKQINSDLANDLGNLLSR 358 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 +V+M +K +G++ P DE + ++ ++ +E R M AL + SL+S Sbjct: 359 TVTMAVKYQEGVVAAPQKREALDEEVAALGAKTAEEYRSLMDGYGFEDALKALWSLISRA 418 Query: 425 DRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-- 481 ++Y D PW+L N +R + VLY EV+R A+ + F+P+ AN+I++ L +A Sbjct: 419 NKYIDETMPWKLSGPENAERLNQVLYTLCEVLRLSALGVAPFMPESANRIWEQLGLAGSP 478 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 E+ ++S + H+ D +FPR Sbjct: 479 ESVGWESWKWGGVEEYRTHRG-DALFPRI 506 >gi|307708991|ref|ZP_07645451.1| methionyl-tRNA synthetase [Streptococcus mitis SK564] gi|307620327|gb|EFN99443.1| methionyl-tRNA synthetase [Streptococcus mitis SK564] Length = 665 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 205/521 (39%), Positives = 315/521 (60%), Gaps = 12/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D ++ V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAQVAEQSIADYHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ +R +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L +A+ + G + PIFPR Sbjct: 480 SRAVLTQLGLAEVSSLENLSLADFPAGVTVVAKGTPIFPRL 520 >gi|296111172|ref|YP_003621553.1| methionine--tRNA ligase [Leuconostoc kimchii IMSNU 11154] gi|295832703|gb|ADG40584.1| methionine--tRNA ligase [Leuconostoc kimchii IMSNU 11154] Length = 703 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 212/523 (40%), Positives = 320/523 (61%), Gaps = 15/523 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +K+ + YI+T I YP+ + +G+ Y ++AD AR+HRL G DV F TGTDEHG KI + Sbjct: 33 VKKDKTFYITTPIYYPSGKLQLGNTYTTVLADAAARYHRLLGEDVHFLTGTDEHGLKIQQ 92 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ AG++ ++D +++ + + ++DISYDDFIRTTE RH + ++ + + DIY Sbjct: 93 KAQAAGISEIDYLDGMAKDIKTLWSLMDISYDDFIRTTEDRHEKAVQKIFTTLLENDDIY 152 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 KG Y GWYS+ DE Y+ + EV++ DG + + V+ ++EE YFF++S Y D Sbjct: 153 KGEYEGWYSVSDEEYFTESQLAEVFRDEDGNMIGGKAPSGHEVELVKEEAYFFKMSKYAD 212 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 LL YY+SHPEFI P R NE+I+ F+ GL+DL+++R + DWGI +P D ++++YVWID Sbjct: 213 WLLEYYKSHPEFIQPEARMNEMINNFIAPGLEDLAVTRASVDWGIPVPGDEKHVIYVWID 272 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + + KFWPA++ ++GK+I+RFH IYWP L + L LPK V H Sbjct: 273 ALSNYITALGYDSDNTEAFDKFWPANVQLVGKEIVRFHTIYWPIMLHALGLELPKSVIGH 332 Query: 294 GFILHKGEKISKSLGNVIDPIEVIE-EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 G+++ K K+SKS GNVI P EV+E G+DA+RY+L+R + G DG + + RVN Sbjct: 333 GWLVMKDGKMSKSKGNVIYP-EVLEARYGLDAVRYYLLRAMPFGNDGVFTPEDFVARVNF 391 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN +GNL++R+V+MI K G++P T+ DE ++ + +N + Sbjct: 392 DLANDLGNLLNRTVAMINKYEGGVVPQLQTGQTDFDEDLVRTVEEAIVSYNQNFKALRTA 451 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469 AL V ++ ++Y D +PW L K + +A S V+ +R +A+LLQ + + Sbjct: 452 DALENVWVIIRRANKYIDETQPWVLAKDDTQKAILSNVMAHLAGALRIVAVLLQPVLTQA 511 Query: 470 ANKIFDIL-FVADEN--RCFQSLDQRLKPGFMLHKTFDPIFPR 509 KI++ L F EN R +L G + K +PIFPR Sbjct: 512 PRKIYEQLGFEYPENGVRIAGLTFGQLPTGGKVVKKGEPIFPR 554 >gi|325115535|emb|CBZ51090.1| methionine--tRNAligase, related [Neospora caninum Liverpool] Length = 982 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 200/481 (41%), Positives = 289/481 (60%), Gaps = 18/481 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K RE+ YI+TAI Y N PH+GH YE + +DV+ARFHR+ G +V F TGTDEHGQKIA Sbjct: 271 KTRERFYITTAINYTNGPPHMGHVYEAVTSDVVARFHRIAGKEVFFLTGTDEHGQKIANT 330 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G T + D + F++M L IS D +IRTT+ H C+ LWK++ +KGDIY Sbjct: 331 AERVGKTPQEICDFFAAGFQEMNKKLHISNDQYIRTTQADHKAVCQWLWKRVQEKGDIYL 390 Query: 122 GCYSGWYSLRDEAYYNDDEV----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY+ R+E + ++ E YK P+Q MEE YFFR+S YQ++LL Sbjct: 391 DTYVGWYNEREETFVSEIEARLTDYKDP------TSGKPLQKMEEASYFFRMSKYQERLL 444 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237 + +P+FI P ERR ++ ++ L DLS SR TF WG+ +P D +++MYVW DALTN Sbjct: 445 KHIHDNPDFIRPEERRKNILKRLEEPLLDLSCSRTTFTWGVPVPGDEKHVMYVWFDALTN 504 Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 Y + T DG+++ FWPA++H+IGKDI+ FH + WP L++A LPLPK VF HGF+ Sbjct: 505 YYSATAM---NDGARSAFWPANVHIIGKDIIWFHTVIWPCMLMAAELPLPKCVFGHGFVT 561 Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 GEK+SKSLGNV+DP ++++E D+ R++LVRE G D +D+D L NA+LA+ Sbjct: 562 AADGEKMSKSLGNVVDPNDILKEHDADSFRFYLVRETKYGNDLRFDEDALTATTNAELAD 621 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNLV R+ S+ +K G +P ++ S+ V E+ ++ + AL Sbjct: 622 TLGNLVHRATSLCVKFCGGRVPA-VPLPAGGKAPFSIADTV-GEMERLVEQFALREALEA 679 Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 ++ E +++ PW L +P V+ +E + LA LL+ F+P + IF Sbjct: 680 AMNACREANKFVTDWAPWSLP--DPVEKQRVVRGALEAVFVLAHLLEPFIPVTSAHIFKK 737 Query: 477 L 477 L Sbjct: 738 L 738 >gi|284046700|ref|YP_003397040.1| methionyl-tRNA synthetase [Conexibacter woesei DSM 14684] gi|283950921|gb|ADB53665.1| methionyl-tRNA synthetase [Conexibacter woesei DSM 14684] Length = 501 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 196/473 (41%), Positives = 285/473 (60%), Gaps = 11/473 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I Y NAQPH+GHAY I ADVLAR R G DV F TGTDEHG+ +A AA G+ Sbjct: 4 YVTTPIYYVNAQPHLGHAYTTIAADVLARHMRQRGEDVFFLTGTDEHGEPVALAADRLGL 63 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 K D+N+ F +M L++S D FIRT++ RH + + ++I D G Y G Y GW Sbjct: 64 APKELADRNAARFEEMMPRLNVSNDFFIRTSDPRHVKKVQEVMQRIHDNGHTYLGTYEGW 123 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 + R + ++E+ A+G H P+ +EE +FFRLS +Q+ L Y P++ Sbjct: 124 FCPRCADFKGENEI---AEGNTCPIHHIPLDREKEENWFFRLSTFQEPLERLYAEQPDWA 180 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 P RRNE ++F++SGL+D+SLSR F WG+ + DP ++ YVW DAL NY T + Sbjct: 181 APPTRRNEALAFIRSGLRDVSLSRGKFTWGVPVTWDPSHVFYVWFDALLNYYTALSFARE 240 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307 + +FWPADLHVIGKDIL+FHA+YWPA L++A+LPLP++ HG++L GEK+SKSL Sbjct: 241 GEDLTERFWPADLHVIGKDILKFHAVYWPAMLMAADLPLPRREMIHGYLLMDGEKMSKSL 300 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GNV+DP EVI+ G DALRY+ +RE++ G+DG G + R ++LAN GNL SR+++ Sbjct: 301 GNVLDPFEVIDRFGTDALRYYCLREVSFGQDGSVSTAGFESRYESELANEYGNLASRTLA 360 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 M+ + DG++P VC V + + +Q AL + V ++RY Sbjct: 361 MVARYRDGVVPAVATDAALAADFAGVCDDVAALLDKAEPSQ----ALEAIWQRVRRLNRY 416 Query: 428 FDAQKPWELKKTNPDRASTV---LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + PW+L + +P A + L E +R + +LL ++P+ A+K L Sbjct: 417 VEERAPWKLAR-DPAAAGQLDETLATLAEGLRVVTVLLHPYIPESADKALAAL 468 >gi|50955324|ref|YP_062612.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951806|gb|AAT89507.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 529 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 211/522 (40%), Positives = 301/522 (57%), Gaps = 15/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + YI+T I Y N PHIGHAY + ADVLAR+ R G D TGTDEHGQKI + Sbjct: 1 MSDGSSFYITTPIFYVNDVPHIGHAYTEVAADVLARWRRQAGDDTWLLTGTDEHGQKILR 60 Query: 61 AAQNAGVTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A G T K + D+ R+ + + +DI+ DDFIRTT++RH + +K+ D G I Sbjct: 61 TATANGTTPKEWADRLVRDEWLPLLTTVDIANDDFIRTTDERHEKNVQKFLQKLYDDGFI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175 Y G Y Y + E + E+ G AD + P++ ++E+ YFFR+S + +K Sbjct: 121 YAGEYEALYCVGCEEFKPQSEIVDGTGEYADQKVCAIHSKPLELLQEKNYFFRMSDFAEK 180 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 LL+ YE P+F+ P RNEV+SFV+ GL DLS+SR +FDWGIK+P D +++YVW DAL Sbjct: 181 LLALYEERPDFVQPESARNEVVSFVRQGLSDLSISRSSFDWGIKVPWDESHVVYVWFDAL 240 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+T GY + + + + WPA H++GKDILRFHA+ WPA LL+A L +P +VF HG+ Sbjct: 241 LNYITAVGYGQDEEAFERR-WPA-THLVGKDILRFHAVIWPAMLLAAGLEVPHRVFGHGW 298 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L GEK+SKS I P ++ + G DA RY+ +R I G+DG + + L R A+LA Sbjct: 299 LLVGGEKMSKSKLTGIAPTQITDTFGSDAFRYYFLRAINFGQDGSFSWEDLSARYQAELA 358 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 NG GNL SR V+M+++ + G +P G F E+D + V ++ + M IH +A Sbjct: 359 NGFGNLASRVVAMVMRYFGGEVPAAGEFREADLEVQRVVAQAAADADAAMARLAIHDGIA 418 Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 V ++V +++ Y Q+PW L K +R TVLY VE +R LA+LL +PK + Sbjct: 419 AVWTIVDQLNGYITEQEPWALAKDEAKRERLQTVLYTAVEGLRALAVLLSPVIPKATAAL 478 Query: 474 FDILFVA------DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 + L V D R + D P + +FPR Sbjct: 479 WTALGVEGELGGLDAQRLRSAGDWGQVPAGTAVNGLEALFPR 520 >gi|237742263|ref|ZP_04572744.1| methionyl-tRNA synthetase [Fusobacterium sp. 4_1_13] gi|229429911|gb|EEO40123.1| methionyl-tRNA synthetase [Fusobacterium sp. 4_1_13] Length = 636 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 210/514 (40%), Positives = 315/514 (61%), Gaps = 13/514 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++ST I Y N PH+G AY I ADV+ R+++ G+D F TG DEHGQK+ +AA+ Sbjct: 2 KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFMTGLDEHGQKVEQAAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + + D+ + NF++M LDI YDDFIRTTE RH + + ++ KGDIYKG Sbjct: 62 QNGYTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDMVNAKGDIYKGE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + E ++ ++++ G++ + ++ ++EE YFF++S Y D LL + E H Sbjct: 122 YEGKYCISCETFFPENQL-NGSNKCPDCGKE--LRVLKEESYFFKMSKYADALLKHIEEH 178 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FILP RRNEVISF+K GL+DLS+SR TF WGI I P +I YVW DALTNYLT+ G Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAG 238 Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 + +N D KFW +H+IGKDI+RFHAI WP LLSA + LP + +HG+ +GE Sbjct: 239 F-ENDDKKFDKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV++P + I++ GVDA RY+L+RE G DG Y + R+N+DLAN +GNL Sbjct: 298 KMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKSIIGRLNSDLANDLGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R++ M K ++ +I D+ I ++ +++++ + M RAL + + Sbjct: 358 LNRTLGMYKKYFNSVIVASSTSEPIDDEIKTMFDDIIKDVEKYMYLFEFSRALETIWKFI 417 Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S +++Y D PW L K R +TV+ + E + ++A L+ ++P+ A KI + L + Sbjct: 418 SRLNKYIDETMPWSLAKDEAKKGRLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477 Query: 480 ADE--NRCFQSLDQR--LKPGFMLHKTFDPIFPR 509 + N F + + K G L + PIFPR Sbjct: 478 DKDITNVKFDDIKEWNIFKEGHKLGEA-SPIFPR 510 >gi|324993726|gb|EGC25645.1| methionine--tRNA ligase [Streptococcus sanguinis SK405] Length = 679 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 201/521 (38%), Positives = 316/521 (60%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 15 MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 74 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG++ + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 75 KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 134 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ +G+ + V+W+ EE YF RLS YQD Sbjct: 135 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 194 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 195 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 254 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 255 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 314 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + R+N Sbjct: 315 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINY 374 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG +P T+ D ++ V S + + ++M Sbjct: 375 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGALAQVASESIADYYKHMDAVDYP 434 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K + V+ V +R +A +++ F+ + Sbjct: 435 RALEAVWTLISRTNKYIDETAPWVLAKDEAKVKELAAVMSHLVASLRVVAHMIEPFMMET 494 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L + +L G + + PIFPR Sbjct: 495 SQAVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 535 >gi|257063479|ref|YP_003143151.1| methionyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476] gi|256791132|gb|ACV21802.1| methionyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476] Length = 526 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 205/514 (39%), Positives = 296/514 (57%), Gaps = 14/514 (2%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 +T I Y NA PH+G AY I AD +AR+ R++G DV F TG DEHGQKIA+ A+ G T Sbjct: 8 FTTPIYYVNAAPHLGTAYTTIAADTVARYQRMNGYDVAFVTGLDEHGQKIAETAEKNGTT 67 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + + D F + D+LDI+Y DF+RT+ R T + W I +KG +YK Y GWY Sbjct: 68 PQAWCDSMVPAFDEAWDMLDITYTDFVRTSSDRQTRTVQKFWNDIYEKGYLYKSAYEGWY 127 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWME--EEGYFFRLSAYQDKLLSYYESHPE 185 + +E YY + ++ K DG++ PV+ M EE +FF+LS +Q+ LL +YE HP+ Sbjct: 128 CVHEETYYAESDLEKNEDGEFICPDCKRPVRHMASGEENWFFKLSEFQEPLLKFYEEHPD 187 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RRNEV++FVKSGL+DLS+SR TFDWGI +P D ++ YVW DAL YLT GY Sbjct: 188 FIRPETRRNEVVTFVKSGLQDLSISRSTFDWGIPLPFDEGHVCYVWADALLAYLTGIGYA 247 Query: 246 D-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D +G WP H +GKDI RFH + WPA L++A LP+ VF HGF+L GEK+S Sbjct: 248 DPEREGEFEARWPMQYHFVGKDITRFHCVIWPAMLMAAGLPVTGTVFGHGFLLVGGEKMS 307 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GN I P ++++ G DA RY+ + ++ G DG + + + NADLAN GNL SR Sbjct: 308 KSKGNGIKPADLVKVYGSDAYRYYFMSDVRFGHDGNISIERMTQVYNADLANTWGNLCSR 367 Query: 365 SVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 +M+ K +DG +P P +++ + ++ + ++ M A+A + L Sbjct: 368 VFNMVGKYFDGKVPEVPAELKDAENPLRTIAEGLYAKVDPCMAEVNFTDAVAAIQELAGA 427 Query: 424 VDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIF-----DI 476 + Y + PW L K+ + + VLY +E R +A+ F+P+ + ++F D Sbjct: 428 ANLYVEQSAPWNLAKSEETKGELAAVLYNALEACRIMALFFAPFMPRTSAEVFRRLGLDD 487 Query: 477 LFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + D+ + Q L G + K DP+FPR Sbjct: 488 ITAVDDIEAASAWGQ-LPAGNPVEKG-DPLFPRL 519 >gi|313682539|ref|YP_004060277.1| methionyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994] gi|313155399|gb|ADR34077.1| methionyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994] Length = 649 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 209/510 (40%), Positives = 304/510 (59%), Gaps = 13/510 (2%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I Y N + HIGHAY IAD LAR RL G + F TGTDEHGQKI ++A Sbjct: 2 KNYITTPIYYVNGEAHIGHAYTTFIADTLARHSRLIGNETYFLTGTDEHGQKIEESAVKQ 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 T+ F D+ S FR++ D +ISYD FIRTT+ H + + K+ + GDIYK Y Sbjct: 62 NKPTQQFADEISATFRNLWDEFNISYDQFIRTTDDAHKKGVQAAFLKMFENGDIYKDFYE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y + E ++ + ++ DG ++EE YFFRLS Y+ LL YYE+HPE Sbjct: 122 GNYCVSCETFFPESQLM---DGGCCPDCGRATTIVKEESYFFRLSKYEKPLLDYYEAHPE 178 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTT 242 FILP RRNEVISFVK GL DLS++R +F WG+ +P+ +P+++MYVW+DAL NY+T Sbjct: 179 FILPKSRRNEVISFVKGGLNDLSVTRTSFSWGVHLPESLNEPKHVMYVWLDALMNYVTAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY D SK FWPA++ ++GKDILRFHAIYWPAFL+S LPLPK + +HG+ GEK Sbjct: 239 GY--GSDESKMLFWPANVQLVGKDILRFHAIYWPAFLMSLGLPLPKHIGAHGWWTRDGEK 296 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+DP EV + GV+ RYF++RE+ G+DG + + L R+N+DL+N +GNL+ Sbjct: 297 MSKSKGNVVDPREVSKHYGVENFRYFMMREVPFGQDGDFSQRALIDRMNSDLSNDLGNLL 356 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 +R + M K Y + G + L+ +L + + +HR L ++ + + Sbjct: 357 NRIIGMSEK-YSDFVIDSGNVAQYHAKELNDAHGILDSLETYLDELQLHRYLEELWKVFT 415 Query: 423 EVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++ + PW ++K+ D A + + ++ + +++L A +P I D L Sbjct: 416 IGNKAIEEHAPWVKIKEGRTDEALATVALVANLLAKASVMLNAIMPATTATIADALGFEI 475 Query: 482 ENRCFQSL--DQRLKPGFMLHKTFDPIFPR 509 +++L ++ L F + K P+FPR Sbjct: 476 TTESYRNLIANKALLATFTIKK-IPPLFPR 504 >gi|154499613|ref|ZP_02037651.1| hypothetical protein BACCAP_03269 [Bacteroides capillosus ATCC 29799] gi|150271691|gb|EDM98935.1| hypothetical protein BACCAP_03269 [Bacteroides capillosus ATCC 29799] Length = 656 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 205/481 (42%), Positives = 304/481 (63%), Gaps = 12/481 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + K YI+T I YP+ + HIGHAY + DV+AR+ RL G DV+F TGTDEHGQKI Sbjct: 1 MSNKGKYYITTPIYYPSDKLHIGHAYCTVATDVMARYKRLTGYDVMFLTGTDEHGQKIED 60 Query: 61 AAQNAGVTTKVFVD---QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117 A++AGVT K +VD + R D+ +++IS D FIRTT+ H + ++K++ ++G Sbjct: 61 KAKDAGVTPKQYVDNIVEGERGVLDLWKLMNISNDRFIRTTDDYHEAAVQKIFKQLYEQG 120 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 DIYKG Y G Y E+++ + ++ DG+ + VQ EEE YFFRLS Y D++ Sbjct: 121 DIYKGTYKGKYCKPCESFWTESQL---VDGKCPDCGRE-VQDAEEEAYFFRLSKYADRIQ 176 Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 E + +F+ P R NE+++ F+K GL+DL +SR +F WG+ + DP +++YVWIDAL+ Sbjct: 177 DLLE-NTDFLEPRSRVNEMVNNFIKPGLEDLCVSRTSFTWGVPVDFDPGHVVYVWIDALS 235 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NY+T GY ++ KFWPAD+H +GK+I+RFH+I WPA L++ NLPLPKKVF HG++ Sbjct: 236 NYITALGYDNDKYNDYDKFWPADVHFVGKEIVRFHSIIWPAILMALNLPLPKKVFGHGWL 295 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L G K+SKS GNV+DP + E GVDALR+FL+R G DG + + L +N DLAN Sbjct: 296 LLDGGKMSKSKGNVVDPYLLSERYGVDALRFFLLRTFPFGSDGNFSNEALIGTINTDLAN 355 Query: 357 GIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 +GNL+SR+VSM+ K ++ G +P D+ ++++ S + + M+ AL+ Sbjct: 356 DLGNLLSRTVSMVGKYFEGGTLPAEQTADGLDDELIALASGLRDKYEAAMERFAFQDALS 415 Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +V L+S ++Y D PW L + N R + V+Y +E +R A+LL F+P + +I Sbjct: 416 EVFKLISRANKYIDETAPWVLARDEANKPRLARVMYNLLESLRISAVLLTPFMPDTSAEI 475 Query: 474 F 474 Sbjct: 476 L 476 >gi|227509271|ref|ZP_03939320.1| methionine--tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191269|gb|EEI71336.1| methionine--tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 675 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 207/519 (39%), Positives = 314/519 (60%), Gaps = 12/519 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + + YI+T I YP+ + HIG++Y I D +AR+ R G DV F TGTDEHG KI + Sbjct: 3 ESKPTFYITTPIYYPSGRLHIGNSYTTIACDAVARYKRAMGYDVFFLTGTDEHGLKIEQK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A G+T + +VD+ ++ +++ L+IS FIRTT+ H +++++ D+GDIY Sbjct: 63 ADKLGMTPQAYVDKMAKGIKELWKKLEISNTKFIRTTDDYHERAVADIFQQLQDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y+GWYS+ DE Y+ + EVY+ DG+ + + VQ + E+ YFF++S Y D Sbjct: 123 GEYTGWYSVSDEEYFTESQLAEVYRDDDGKVIGGKAPSGHEVQLVHEQSYFFKMSKYADW 182 Query: 176 LLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L YY+ HP+FI P R NE+I +F+ GL+DL++SR TF WG+ + DP++++YVWIDA Sbjct: 183 LRQYYQDHPDFIQPSTRMNEMIKNFIDPGLEDLAVSRTTFHWGVPVKSDPKHVVYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY D K+WPAD+ ++GK+I+RFH IYWP L + LPLPK V+ HG Sbjct: 243 LSNYITALGYDGKDDSDFKKYWPADVQMVGKEIVRFHTIYWPIILHALGLPLPKTVYGHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 ++L K K+SKS GNVI P +++ G+DALRY+L+R + DG + + RVN DL Sbjct: 303 WLLMKDGKMSKSKGNVIYPETLMDRYGLDALRYYLLRAMPYANDGIFTPEDFVDRVNFDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+VSMI K G+IP E+D+ + V + +++M + A Sbjct: 363 ANDLGNLLNRTVSMINKYEGGIIPEFKAGVNEADKELEEVSKESIAGFKKSMDDLHFSEA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L++V LVS+ ++Y D +PW L K + D+ ++V+ +R +A L+ + Sbjct: 423 LSEVWKLVSQSNKYIDQTEPWVLAKNDADKEKLASVMSHLAASLRVIAELISPIMTHAPK 482 Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509 +IF L + DE ++LD L G PIFPR Sbjct: 483 EIFQQLGL-DEAIDIKNLDISDLPAGAKTVAKGTPIFPR 520 >gi|268679313|ref|YP_003303744.1| methionyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946] gi|268617344|gb|ACZ11709.1| methionyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946] Length = 642 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 206/512 (40%), Positives = 311/512 (60%), Gaps = 13/512 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I Y N PHIGHAY IIAD +AR++RL G + F TGTDEHGQKI +AA++ Sbjct: 3 QKAYITTPIYYVNDVPHIGHAYTTIIADTMARYYRLKGYETFFLTGTDEHGQKIEEAAKS 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G T + + D+ S FR + D +ISYD FIRTT+ H + ++ + DKGDIYKG Y Sbjct: 63 RGKTPQAYADEISGKFRALWDEFEISYDKFIRTTDAEHKAGVQKAFQVMFDKGDIYKGEY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + E ++ D ++ D + ++EE YFF+LS YQ+ L+ +Y S Sbjct: 123 EGHYCVSCETFFTDTQL---VDEDKCPDCGKLTRLVKEESYFFKLSKYQEDLIKWYNSDE 179 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 + +LP ++NEVISFVK GL+DLS++R +FDWG+K+P +D +++MYVW+DAL NY T Sbjct: 180 KCVLPKGKKNEVISFVKQGLRDLSITRTSFDWGVKLPSSMNDDKHVMYVWLDALLNYTTA 239 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY D +FWPA +H++GKDILRFHAIYWPAFL+S L LPK V +HG+ GE Sbjct: 240 LGY--GGDEKNMEFWPATMHLVGKDILRFHAIYWPAFLMSLGLALPKHVAAHGWWTRNGE 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV++P EV + G++ RYF++RE+ G+DG + + L R+N+DL N +GNL Sbjct: 298 KMSKSKGNVVNPKEVADAYGLENFRYFMLREVPFGQDGDFSQKALMDRINSDLGNELGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K +G++ + T ES L +L+ + N+ +R L ++ ++ Sbjct: 358 LNRIIGMSGKYSNGVVNSKDVNT-FHESELDAVEEILKNVENNLLELQTNRYLEELWKVL 416 Query: 422 SEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 S ++ +PW ++K+ ++A ++ + ++ ++++LL +PK I L Sbjct: 417 SIANQAITVHEPWVKIKEGKVEQALALVALVSNILARVSVLLHPIMPKTTTTIAKALGFE 476 Query: 481 DENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510 + L R L F + K P+FPR Sbjct: 477 INTASYDKLVVRKTLLEEFTIEKV-PPLFPRI 507 >gi|228477862|ref|ZP_04062476.1| methionyl-tRNA synthetase [Streptococcus salivarius SK126] gi|228250352|gb|EEK09592.1| methionyl-tRNA synthetase [Streptococcus salivarius SK126] Length = 667 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 206/523 (39%), Positives = 317/523 (60%), Gaps = 23/523 (4%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+ + HIG AY I DVLAR+ R+ DV + TG DEHGQKI + A+ AG Sbjct: 5 FYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEEAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + +VD + +D+ +LDISYD FIRTT+ H +++++ ++GDIY G YSG Sbjct: 65 ITPQEYVDGMAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEQGDIYLGEYSG 124 Query: 127 WYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 WYS+ DE ++ + EVY+ +G + V+ + EE YFF+LS Y D+L +++ Sbjct: 125 WYSVSDEEFFTESQLAEVYRDEEGNVIGGVAPSGHEVELVSEESYFFKLSNYADRLTAFF 184 Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 + HPEFI P R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL NY+ Sbjct: 185 KEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDALINYI 244 Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 T GY + G+ FW D +H+IGKDILRFH+IYWP L++ +LPLP ++ +HG Sbjct: 245 TALGYGQDEHGNFDLFWQNDENHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVAHG 304 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + + K K+SKS GNVI P ++E G+D LRY+L+R + G DG + + R+N +L Sbjct: 305 WFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINYEL 364 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K + G +P T+ D + V + ++E + M RA Sbjct: 365 ANDLGNLLNRTVAMINKYFGGQVPAYVENVTDFDADLAKVVAENIEEFHKQMNAVDFPRA 424 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L V +++S ++Y D PW L K + D+ + V+ +R +A L+Q F+ +N Sbjct: 425 LDAVWNIISRTNKYIDETAPWVLAKEDGDKEQLAAVMAHLAASLRVVAHLIQPFMMTTSN 484 Query: 472 KIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I + L ++ EN + + + + PIFPR Sbjct: 485 AIMEQLGLSGAFDLENLELSAFPENVT----VVSKGTPIFPRL 523 >gi|148992454|ref|ZP_01822149.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|147928771|gb|EDK79784.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] Length = 665 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 207/522 (39%), Positives = 318/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T +V+VD+ + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQVYVDRMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D + V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ IR +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + +E ++L P + PIFPR Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520 >gi|322372362|ref|ZP_08046898.1| methionine--tRNA ligase [Streptococcus sp. C150] gi|321277404|gb|EFX54473.1| methionine--tRNA ligase [Streptococcus sp. C150] Length = 667 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 208/523 (39%), Positives = 320/523 (61%), Gaps = 23/523 (4%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+ + HIG AY I DVLAR+ R+ DV + TG DEHGQKI + A+ AG Sbjct: 5 FYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEEAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + +VD + +D+ +L+ISYD FIRTT+ H +++++ ++GDIY G YSG Sbjct: 65 ITPQAYVDGMAVGVKDLWQLLNISYDKFIRTTDDYHEKVVAQVFERLLEQGDIYLGEYSG 124 Query: 127 WYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 WYS+ DE ++ + EVY+ G+ + V+ + EE YFF+LS Y D+L +++ Sbjct: 125 WYSVSDEEFFTESQLAEVYRDEQGKVIGGVAPSGHEVELVSEESYFFKLSNYADRLAAFF 184 Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 + HPEFI P R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL NY+ Sbjct: 185 KEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDALINYI 244 Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 T GY + G+ FW + +H+IGKDILRFH+IYWP L++ +LPLP ++ +HG Sbjct: 245 TALGYGQDEHGNFDLFWQNNENHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVAHG 304 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + + K K+SKS GNVI P ++E G+D LRY+L+R + G DG + + R+N +L Sbjct: 305 WFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINYEL 364 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K + G +PT T+ D + V + ++E + M RA Sbjct: 365 ANDLGNLLNRTVAMINKYFGGQVPTYVENVTDFDADLSKVVAENIEEFHKQMNAVDFPRA 424 Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 L V +++S ++Y D PW L K +N ++ + V+ +R +A L+Q F+ +N Sbjct: 425 LDAVWNIISRTNKYIDETAPWVLAKEDSNKEQLAAVMAHLAASLRVVAHLIQPFMMTTSN 484 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510 I + L ++ F + L GF + T PIFPR Sbjct: 485 AIMEQLGLSG---TFDLENLELS-GFPENVTVVSKGTPIFPRL 523 >gi|270292555|ref|ZP_06198766.1| methionine--tRNA ligase [Streptococcus sp. M143] gi|270278534|gb|EFA24380.1| methionine--tRNA ligase [Streptococcus sp. M143] Length = 679 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 204/521 (39%), Positives = 315/521 (60%), Gaps = 12/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 15 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 74 KAEEAGITPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 194 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 254 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 313 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 373 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D ++ V + + + +M+ Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAQVAEQSISDYHTHMEAVDYP 433 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ +R +A L++ F+ + Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 493 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L +A+ + G + PIFPR Sbjct: 494 SRAVLAQLGLAEVSSLENLSLTDFPAGVTVVAKGTPIFPRL 534 >gi|325690672|gb|EGD32673.1| methionine--tRNA ligase [Streptococcus sanguinis SK115] Length = 679 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 200/521 (38%), Positives = 316/521 (60%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 15 MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 74 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG++ + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 75 KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 134 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ +G+ + V+W+ EE YF RLS YQD Sbjct: 135 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLSKYQD 194 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 195 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 254 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 255 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 314 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + R+N Sbjct: 315 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 374 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG +P T+ D ++ V S + + ++M Sbjct: 375 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGALAQVASESIADYYKHMDAVDYP 434 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K + + V+ +R +A +++ F+ + Sbjct: 435 RALEAVWTLISRTNKYIDETAPWVLAKDDSKVKELAAVMSHLAASLRVVAHMIEPFMMET 494 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L + +L G + + PIFPR Sbjct: 495 SKSVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 535 >gi|149021655|ref|ZP_01835686.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] gi|147930116|gb|EDK81102.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] Length = 665 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 207/522 (39%), Positives = 318/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T +V+VD+ + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQVYVDRMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D + V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ IR +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWILAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + +E ++L P + PIFPR Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520 >gi|329935921|ref|ZP_08285723.1| methionyl-tRNA synthetase [Streptomyces griseoaurantiacus M045] gi|329304612|gb|EGG48488.1| methionyl-tRNA synthetase [Streptomyces griseoaurantiacus M045] Length = 547 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 207/507 (40%), Positives = 307/507 (60%), Gaps = 24/507 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y+ST I Y N PH+GHAY + DVL R+HR G V + TGTDEHGQKI + A+ GV Sbjct: 15 YVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANGV 74 Query: 68 TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + + D+ + + + + LDI+ DDFIRTT+KRH D + + + DKG+IYKG Y G Sbjct: 75 TPQAWADKLVTEAWEPLWEHLDIANDDFIRTTQKRHTDRVQEFVQDLHDKGEIYKGGYEG 134 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y + E Y E+ G +G++ + PV+ + EE YFFRLS Y DKLL++YE Sbjct: 135 PYCVGCEEYKLPGELLDG-EGEFAGQKLCPIHKKPVEILSEENYFFRLSEYTDKLLAHYE 193 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 ++P+FI P RNEV++FV+ GL+DLS+SR TFDWGI IP D ++++YVWIDAL NY T Sbjct: 194 ANPDFIQPESARNEVVNFVRQGLQDLSISRSTFDWGIPIPWDEKHVIYVWIDALLNYATA 253 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY +N + + F PAD+H++GKDILRFHA+ WPA L++ LPLP KV ++G+++ GE Sbjct: 254 VGYNENQEKFEETF-PADVHLVGKDILRFHAVIWPAMLMAQGLPLPGKVAANGWLMVGGE 312 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS I P ++ GVDA R++ +R IA G+DG + + R ++LAN GNL Sbjct: 313 KMSKSNLTGIKPQDLTTHFGVDAYRWYFLRAIAFGQDGSFSWEDFSARYTSELANDYGNL 372 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420 SR +M+ K +DG +P A E++ ++ + ++ + E + +L + V Sbjct: 373 ASRVAAMVGKYFDGELPASTADGEAEAAVRAGLAKAVAEADRRIGEELDFQGGILAVFDF 432 Query: 421 VSEVDRYFDAQKPWELKKT-------------NPDRASTVLYVTVEVIRQLAILLQAFVP 467 V +V+ Y Q+PW++ KT R +T+LY E +R +A+LL +P Sbjct: 433 VKQVNGYLTEQEPWKVAKTAFSDAAGAAGSEEGRARLATILYTAAEALRAVAVLLNPVMP 492 Query: 468 KLANKIFDILFVADENRCFQSLDQRLK 494 + + K+++ L E DQR++ Sbjct: 493 ETSQKLWESL--GAEPSLGALADQRVQ 517 >gi|325687041|gb|EGD29064.1| methionine--tRNA ligase [Streptococcus sanguinis SK72] Length = 679 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 200/521 (38%), Positives = 318/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 15 MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 74 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG++ + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 75 KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 134 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ +G+ + V+W+ EE YF RLS YQD Sbjct: 135 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 194 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 195 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 254 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 255 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 314 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + R+N Sbjct: 315 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINY 374 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP T+ D ++ V ++ + + ++M Sbjct: 375 ELANDLGNLLNRTVSMINKYFDGQIPAYEEDVTDFDGALAQVAAQSIADYYKHMDAVDYP 434 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V L+S ++Y D PW L K ++ ++V+ +R +A +++ F+ + Sbjct: 435 RALEAVWMLISRTNKYIDETAPWVLAKDEALRNQLASVMSHLAASLRVVAHMIEPFMMET 494 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L + +L G + + PIFPR Sbjct: 495 SKAVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 535 >gi|170016653|ref|YP_001727572.1| methionyl-tRNA synthetase [Leuconostoc citreum KM20] gi|169803510|gb|ACA82128.1| Methionyl-tRNA synthetase [Leuconostoc citreum KM20] Length = 705 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 210/523 (40%), Positives = 318/523 (60%), Gaps = 15/523 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +++ + YI+T I YP+ + +G+ Y ++AD AR+HRL G V F TGTDEHG KI + Sbjct: 33 VQKDKTFYITTPIYYPSGKLQLGNTYTTVLADAAARYHRLLGEQVHFLTGTDEHGLKIQQ 92 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG + ++D ++ +D+ ++DISYDDFIRTTE+RH + ++ + +KGDIY Sbjct: 93 KAEAAGTSEIAYLDGMAKQIKDLWQLMDISYDDFIRTTEERHEKAVQKIFNTLFEKGDIY 152 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 KG Y GWYS+ DE Y+ + EVY G+ + + V+ ++EE YFF++S Y D Sbjct: 153 KGEYEGWYSVSDEEYFTESQLAEVYHDDAGKMIGGKAPSGHEVELVKEEAYFFKMSKYAD 212 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 LL YY++HPEFI P R NE+I+ F+ GL+DL+++R DWGI +P D ++++YVWID Sbjct: 213 WLLDYYKTHPEFIQPEARMNEMINNFIAPGLEDLAVTRTAVDWGIPVPGDEKHVIYVWID 272 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + KFWPA++ ++GK+I+RFH IYWP L + L LPK V H Sbjct: 273 ALSNYITALGYDSDNTDLFDKFWPANVQLVGKEIVRFHTIYWPIMLHALGLELPKSVIGH 332 Query: 294 GFILHKGEKISKSLGNVIDPIEVIE-EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 G+++ K K+SKS GNVI P EV+E G+DA+RY+L+R + G DG + + RVN Sbjct: 333 GWLVMKDGKMSKSKGNVIYP-EVLEARYGLDAVRYYLLRAMPFGNDGVFTPEDFVARVNF 391 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN +GNL++R+V+MI K G++P T+ DE ++ + + Q+ Sbjct: 392 DLANDLGNLLNRTVAMINKYEHGVVPELHTGKTDFDEDLVRTVEDAIADYNRYFQDMRTA 451 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469 AL V +++ ++Y D +PW L K + + S V+ +R +A+LLQ + + Sbjct: 452 DALESVWTIIRRANKYIDETQPWVLAKDDTQKVVLSNVMAHLAAALRVVAVLLQPVLTQA 511 Query: 470 ANKIFDIL-FVADEN--RCFQSLDQRLKPGFMLHKTFDPIFPR 509 KI++ L F EN R +L G + K +PIFPR Sbjct: 512 PKKIYEQLGFTYPENGVRIAGLTFGKLPTGGTVVKKGEPIFPR 554 >gi|218248716|ref|YP_002374087.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8801] gi|257061779|ref|YP_003139667.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8802] gi|218169194|gb|ACK67931.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8801] gi|256591945|gb|ACV02832.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8802] Length = 535 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 197/478 (41%), Positives = 292/478 (61%), Gaps = 9/478 (1%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K ++T + Y N PHIG AY +IADV+ARF RL G VL TGTDEHGQKI + A+ Sbjct: 10 KFALTTPLYYVNDVPHIGSAYTTMIADVIARFKRLQGSSVLLITGTDEHGQKIERTAEAK 69 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ + D+ +F + L+I YD F RTT K H + ++++ ++GDIY Sbjct: 70 GLEPQEHCDRIVESFESLWQKLNIQYDRFSRTTAKNHGAIVKEFFQRVWEQGDIYLAQQQ 129 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY + E + E+ + DG + +W +EE YFFRLS YQ+KL + Y+ HPE Sbjct: 130 GWYCVPCEEFKEKRELLE--DGCCPLHPNKKAEWRDEENYFFRLSNYQEKLETLYQEHPE 187 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RRNEVISFV GL+D S+SR WG +P D + +YVW DAL Y+T Sbjct: 188 FIEPESRRNEVISFVSGGLQDFSISRVNVAWGFPVPGDDNHTIYVWFDALLGYITALLEP 247 Query: 246 DNPDG---SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 D G + +++WP +LH+IGKDILRFHA+YWPA L+SA LPLPK++FSHGF+ G+K Sbjct: 248 DQEAGLENALSQWWPINLHLIGKDILRFHAVYWPAMLMSAKLPLPKQIFSHGFLTKDGQK 307 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKSLGN ++P +++E G DA+RY+ ++EI CG+DG +++ +NADLAN +GNL+ Sbjct: 308 MSKSLGNTVNPFDLVERYGSDAVRYYFLKEIDCGRDGDFNETRFVNVLNADLANDLGNLL 367 Query: 363 SRSVSMILKDYDGMIPTPGAFTE--SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 +R++ MI K G+IP P E + S+ S+ + + + + ++A ++++L Sbjct: 368 NRTLGMIKKYCQGVIP-PLIIEELALEHSLKSIGLELGDRVTQAYETLRFNQACEEILTL 426 Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + +++ D Q PW L K+ ++L +E +R A LL +P L+NK++ L Sbjct: 427 IRASNKFIDEQAPWRLFKQGQQKEVESILAAVLESVRLSAYLLSPIIPNLSNKVYQQL 484 >gi|331002319|ref|ZP_08325837.1| hypothetical protein HMPREF0491_00699 [Lachnospiraceae oral taxon 107 str. F0167] gi|330410135|gb|EGG89569.1| hypothetical protein HMPREF0491_00699 [Lachnospiraceae oral taxon 107 str. F0167] Length = 654 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 202/478 (42%), Positives = 302/478 (63%), Gaps = 14/478 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAIAY + +PHIG+ YE+++AD +ARF R +G +V F TGTDEHGQKI A+ AG+ Sbjct: 7 YITTAIAYASGKPHIGNTYEIVLADAIARFRREEGHEVFFQTGTDEHGQKIENKAKEAGI 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K +VD + R + D+++ SYD FIRTT+ H + ++KK D+GDIYKG Y G Sbjct: 67 TPKEYVDNAAGQIRKIWDMMNTSYDKFIRTTDDDHKKQVQKIFKKFYDQGDIYKGFYEGM 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ D ++ DG+ + H V +E+ YFF++S Y D+L+ + HPEFI Sbjct: 127 YCTACESFFTDSQL---VDGKCPDC-HGDVYPAKEDAYFFKMSKYADRLIKHINEHPEFI 182 Query: 188 LPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P+ R+NE++ +F+ GL+DL +SR +F WGI + DP+++ YVW+DAL+NY+T GY Sbjct: 183 QPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKHVTYVWLDALSNYITGIGYDV 242 Query: 247 NPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + + S+ K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L K+S Sbjct: 243 DGESSERFKKLWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQGDGKMS 302 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+ +++ GVDA+RYF++ E+ DG D + +R N+DLAN +GNLVSR Sbjct: 303 KSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVISWDLMVERFNSDLANVLGNLVSR 362 Query: 365 SVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 ++SM K +DG++ + TE D + V +++ + M + A+ ++ + Sbjct: 363 TISMSNKYFDGVLTDTKDESVAGATEIDTDLKDVVLMSVEKAVKKMSELRVADAITEIWT 422 Query: 420 LVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 L ++Y D PW L K R TVLY E I A LL +F+P+ + KI + Sbjct: 423 LFKRCNKYIDETTPWILAKEEDKKSRLQTVLYNLAESIAIGASLLYSFMPETSGKILE 480 >gi|227512284|ref|ZP_03942333.1| methionine--tRNA ligase [Lactobacillus buchneri ATCC 11577] gi|227084459|gb|EEI19771.1| methionine--tRNA ligase [Lactobacillus buchneri ATCC 11577] Length = 675 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 206/519 (39%), Positives = 313/519 (60%), Gaps = 12/519 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + + YI+T I YP+ + HIG++Y I D +AR+ R G DV F TGTDEHG KI + Sbjct: 3 ESKPTFYITTPIYYPSGRLHIGNSYTTIACDAVARYKRAMGYDVFFLTGTDEHGLKIEQK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A G+ + +VD+ ++ +++ L+IS FIRTT+ H +++++ D+GDIY Sbjct: 63 ADKLGMAPQAYVDKMAKGIKELWKKLEISNTKFIRTTDDYHEKAVADIFQQLQDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y+GWYS+ DE Y+ + EVY+ DG+ + + VQ + E+ YFF++S Y D Sbjct: 123 GEYTGWYSVSDEEYFTESQLAEVYRDDDGKVIGGKAPSGHEVQLVHEQSYFFKMSKYADW 182 Query: 176 LLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L YY+ HP+FI P R NE+I +F+ GL+DL++SR TF WG+ + DP++++YVWIDA Sbjct: 183 LRQYYQDHPDFIQPSTRMNEMIKNFIDPGLEDLAVSRTTFHWGVPVKSDPKHVVYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY D K+WPAD+ ++GK+I+RFH IYWP L + LPLPK V+ HG Sbjct: 243 LSNYITALGYDGKDDSDFKKYWPADVQMVGKEIVRFHTIYWPIILHALGLPLPKTVYGHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 ++L K K+SKS GNVI P +++ G+DALRY+L+R + DG + + RVN DL Sbjct: 303 WLLMKDGKMSKSKGNVIYPETLMDRYGLDALRYYLLRAMPYANDGIFTPEDFVDRVNFDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+VSMI K G+IP E+D+ + V + +++M + A Sbjct: 363 ANDLGNLLNRTVSMINKYEGGIIPGFKAGVNEADKELEEVSKESIASFKKSMDDLHFSEA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L++V LVS+ ++Y D +PW L K + D+ ++V+ +R +A L+ + Sbjct: 423 LSEVWKLVSQSNKYIDQTEPWVLAKNDADKEKLASVMSHLAASLRVIAELISPIMTHAPK 482 Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509 +IF L + DE ++LD L G PIFPR Sbjct: 483 EIFQQLGL-DEAIDIKNLDISDLPTGAKTVAKGTPIFPR 520 >gi|317473421|ref|ZP_07932715.1| methionyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] gi|316899071|gb|EFV21091.1| methionyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] Length = 655 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 204/491 (41%), Positives = 311/491 (63%), Gaps = 11/491 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+TAI Y + +PHIG+ YE+I+AD +AR+ R++G DV F TGTDEHGQK+ A Sbjct: 10 KEPYYITTAITYTSGKPHIGNTYEIILADSIARYKRMEGYDVFFQTGTDEHGQKVELKAA 69 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT K FVD + + + D+++ SYD FIRTT+ H + ++KK+ ++GDIYKG Sbjct: 70 EQGVTPKEFVDDVAGEIKRIWDLMNTSYDKFIRTTDADHEAQVQKIFKKLYEQGDIYKGH 129 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ DG+ + VQ +EE YF +LS Y D+L+ Y +H Sbjct: 130 YEGLYCTPCESFFTESQL---VDGKCPDCGRE-VQPAKEEAYFLKLSKYADRLIEYINTH 185 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEFI P R+NE+++ F+ GL+DL +SR +F WGI + D +++YVW+DALTNY+T Sbjct: 186 PEFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDEGHVVYVWLDALTNYITGI 245 Query: 243 GYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY + D + K WPADLH+IGKDI+RFH IYWP L++ +LPLPK+VF H ++L Sbjct: 246 GYDCDGDSTDQFNKLWPADLHLIGKDIIRFHTIYWPIILMALDLPLPKQVFGHPWLLQGD 305 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKS GNV+ ++ VDA+RYF++ E+ DG + + +R+N+DLAN +GN Sbjct: 306 GKMSKSKGNVLYADDLAGMFSVDAVRYFVLHEMPFEHDGVISWELMVERMNSDLANTLGN 365 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 LV+R++SM K +DG++ GA E D+ + +V + +++++ M + A+ ++ ++ Sbjct: 366 LVNRTISMSNKYFDGIVEDKGAEDEFDDQLKAVVTGAREKVQKKMDVLRVADAMTEIFNV 425 Query: 421 VSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 ++Y D PW L K + DR +TVLY VE I A LL+ ++P+ + KI L Sbjct: 426 FKRCNKYIDETMPWVLAKDDAKKDRLATVLYNLVEGILTGAALLEPYMPETSAKILKQLN 485 Query: 479 VADENRCFQSL 489 E R F+ L Sbjct: 486 A--EPRSFEDL 494 >gi|28377354|ref|NP_784246.1| methionine--tRNA ligase [Lactobacillus plantarum WCFS1] gi|254555549|ref|YP_003061966.1| methionine-tRNA ligase [Lactobacillus plantarum JDM1] gi|308179569|ref|YP_003923697.1| methionine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ST-III] gi|38258344|sp|Q88Z97|SYM_LACPL RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|28270186|emb|CAD63085.1| methionine--tRNA ligase [Lactobacillus plantarum WCFS1] gi|254044476|gb|ACT61269.1| methionine-tRNA ligase [Lactobacillus plantarum JDM1] gi|308045060|gb|ADN97603.1| methionine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 683 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 207/516 (40%), Positives = 309/516 (59%), Gaps = 14/516 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I YP+ + HIG++Y I D LAR+ R G DV F TGTDEHG KI + A+ Sbjct: 9 YITTPIYYPSGKLHIGNSYTTIACDTLARYKRAMGYDVYFLTGTDEHGLKIEEKAEKLNT 68 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 K +VD ++ +D+ +L+IS D FIRTT+ H + ++ ++ GDIY G Y GW Sbjct: 69 DPKSYVDGMAKQIKDLWQLLEISNDKFIRTTDDYHERAVQEIFDRLLKNGDIYLGEYEGW 128 Query: 128 YSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDKLLSYYE 181 YS+ DE Y+ + EV++ +G+ + + V+ ++E+ YFF++S Y D LL YY+ Sbjct: 129 YSVDDEEYFTETQLAEVFRDDNGKVIGGKAPSGHEVELVKEQSYFFKMSKYADWLLDYYQ 188 Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 SHP+FI P R E+I+ F+K GL+DL++SR +F WG+ + DP++++YVWIDALTNY+T Sbjct: 189 SHPDFIEPANRMTEMINNFIKPGLEDLAVSRTSFTWGVPVKSDPKHVVYVWIDALTNYIT 248 Query: 241 TTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GY + + KFWPAD+ ++GK+I+RFH IYWP L + LPLPKKVF HG++L K Sbjct: 249 ALGYATGDSEDLFNKFWPADVQMVGKEIVRFHTIYWPIILHALGLPLPKKVFGHGWLLMK 308 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GNVI P ++E G+DALRY+LV+ + G DG + + RVN DLAN +G Sbjct: 309 DGKMSKSKGNVIYPETLVERYGLDALRYYLVKAMPYGNDGLFTPEDFVARVNYDLANDLG 368 Query: 360 NLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 NL++R+++MI K DG +P TE D + + + ++ M + + ALA+V Sbjct: 369 NLLNRTIAMINKYEDGQLPAFKAGVTEFDADLEATAATTIKNFNACMDSLHLSDALAEVW 428 Query: 419 SLVSEVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 LVS ++Y D PW+L K+ + D+ ++V+ +R +A L+ + +IF Sbjct: 429 KLVSRTNKYIDETAPWQLAKSDDANDADKLASVMAHLAASLRVIASLISPVMTHAPKEIF 488 Query: 475 DILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509 L + L L G + PIFPR Sbjct: 489 TQLGLDPATLAIADLQLADLPAGAQVVAKGTPIFPR 524 >gi|154482623|ref|ZP_02025071.1| hypothetical protein EUBVEN_00290 [Eubacterium ventriosum ATCC 27560] gi|149736523|gb|EDM52409.1| hypothetical protein EUBVEN_00290 [Eubacterium ventriosum ATCC 27560] Length = 648 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 205/472 (43%), Positives = 299/472 (63%), Gaps = 9/472 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++TAIAY + +PHIG+ YE I+AD + RF R G DV F TGTDEHGQKI A AG+ Sbjct: 6 YLTTAIAYTSGKPHIGNTYEAILADSIVRFKRQQGYDVRFQTGTDEHGQKIELKAAEAGI 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K FVD S +++ D+++ SYD FIRTT+ H + ++KK+ D+GDIYKG Y G Sbjct: 66 TPKEFVDNVSGVIKEIWDLMNTSYDKFIRTTDPDHEKQVQKIFKKLYDQGDIYKGHYEGM 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + V +EE YFFR+S Y D+L+ + +HPEFI Sbjct: 126 YCTPCESFFTESQL---VDGKCPDCGRE-VTPAKEEAYFFRMSKYADRLIEHINTHPEFI 181 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-L 245 P R+NE+++ F+ GL+DL +SR +F WGI + DP++++YVWIDAL+NY+T GY + Sbjct: 182 QPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWIDALSNYITGLGYDV 241 Query: 246 D-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D N D K+WPADLH+IGKDILRFH IYWP L++ ++PLPK++F H ++L K+S Sbjct: 242 DGNNDPLYDKYWPADLHLIGKDILRFHTIYWPIMLMALDVPLPKQIFGHPWLLQGDGKMS 301 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNVI ++ GVDA+RYF++ E+ DG + + +R+N+DLAN +GNLV+R Sbjct: 302 KSKGNVIYADDLANLFGVDAVRYFVLHEMPFENDGTITWELMVERMNSDLANTLGNLVNR 361 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 ++SM K +DG++ G E D+ V + E M + A+ ++ +L Sbjct: 362 TISMSNKYFDGVVSNKGVDEEVDDDFKKVILDTPVKAAEKMDKLRVADAITEIFTLFKRC 421 Query: 425 DRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 ++Y D PW L K DR +TVLY +E I A LL+ F+P+ + KI Sbjct: 422 NKYIDETMPWALAKEEDKQDRLATVLYNLIEGITIGASLLEPFMPETSKKIL 473 >gi|21222203|ref|NP_627982.1| methionyl-tRNA synthetase [Streptomyces coelicolor A3(2)] gi|256786707|ref|ZP_05525138.1| methionyl-tRNA synthetase [Streptomyces lividans TK24] gi|289770602|ref|ZP_06529980.1| methionyl-tRNA synthetase [Streptomyces lividans TK24] gi|25009395|sp|Q9F2I9|SYM_STRCO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|10432496|emb|CAC10330.1| putative methionyl tRNA synthetase [Streptomyces coelicolor A3(2)] gi|289700801|gb|EFD68230.1| methionyl-tRNA synthetase [Streptomyces lividans TK24] Length = 538 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 199/481 (41%), Positives = 304/481 (63%), Gaps = 13/481 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y+ST I Y N PH+GHAY + DVL R+HR G V + TGTDEHGQKI + A+ GV Sbjct: 15 YVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANGV 74 Query: 68 TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + + D+ + +++ + + LDI+ DDFIRTT+KRH D + + + DKG+IYKG Y G Sbjct: 75 TPQAWADKLVTESWKPLWEHLDIANDDFIRTTQKRHTDRVQEFVQDLYDKGEIYKGGYEG 134 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y + E Y E+ G +G+Y + PV+ + EE YFF+LS Y +KLL++YE Sbjct: 135 PYCVGCEEYKLPGELLDG-EGEYAGQKLCPIHKKPVEILSEENYFFKLSEYSEKLLAHYE 193 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 ++P F+ P RNEV++FV+ GL+DLS+SR TFDWG+ +P D ++++YVW+DAL NY T Sbjct: 194 ANPGFVQPESARNEVVNFVRQGLQDLSISRSTFDWGVPVPWDDKHVIYVWVDALLNYATA 253 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY +NP+ ++ F PAD+H++GKDILRFHAI WPA L++ LPLP K+ ++G+++ GE Sbjct: 254 VGYNENPEKFESTF-PADVHLVGKDILRFHAIIWPAMLMAQGLPLPGKIAANGWLMVGGE 312 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS I P ++ GVDA R++ +R IA G+DG + + R ++LAN GNL Sbjct: 313 KMSKSNLTGIKPQDLTTHFGVDAYRWYFLRAIAFGQDGSFSWEDFSARYTSELANDYGNL 372 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420 SR +M+ K + G +P A +++++I ++ + E + +L + V Sbjct: 373 ASRVAAMVGKYFGGELPAATADGDAEQAIHDGLTKAVAEADRKIGEELDFQGGILAVFDF 432 Query: 421 VSEVDRYFDAQKPWELKKTN-PD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 V +V+ Y Q+PW++ K + P+ R +T+LY E +R +A+LL +P + K++D Sbjct: 433 VKQVNGYITEQEPWKVAKDDSPEGKARLATILYTAAEALRAVAVLLNPIMPDTSQKLWDS 492 Query: 477 L 477 L Sbjct: 493 L 493 >gi|327462090|gb|EGF08419.1| methionine--tRNA ligase [Streptococcus sanguinis SK1057] Length = 665 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 200/521 (38%), Positives = 316/521 (60%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 61 KAEEAGITPQAYVDGMVVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ +G+ + V+W+ EE YF RLS YQD Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVIYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSM+ K +DG IP T+ D ++ V ++ + + ++M Sbjct: 361 ELANDLGNLLNRTVSMVNKYFDGQIPAYEENVTDFDGALAQVAAQSIADYYKHMDAVDYP 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K + + V+ +R +A +++ F+ + Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDDSKVKELAAVMSHLAASLRVVAHMIKPFMMET 480 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L + +L G + + PIFPR Sbjct: 481 SKSVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 521 >gi|300767096|ref|ZP_07077009.1| methionine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300495634|gb|EFK30789.1| methionine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 689 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 207/516 (40%), Positives = 309/516 (59%), Gaps = 14/516 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I YP+ + HIG++Y I D LAR+ R G DV F TGTDEHG KI + A+ Sbjct: 15 YITTPIYYPSGKLHIGNSYTTIACDTLARYKRAMGYDVYFLTGTDEHGLKIEEKAEKLNT 74 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 K +VD ++ +D+ +L+IS D FIRTT+ H + ++ ++ GDIY G Y GW Sbjct: 75 DPKSYVDGMAKQIKDLWQLLEISNDKFIRTTDDYHERAVQEIFDRLLKNGDIYLGEYEGW 134 Query: 128 YSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDKLLSYYE 181 YS+ DE Y+ + EV++ +G+ + + V+ ++E+ YFF++S Y D LL YY+ Sbjct: 135 YSVDDEEYFTETQLAEVFRDDNGKVIGGKAPSGHEVELVKEQSYFFKMSKYADWLLDYYQ 194 Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 SHP+FI P R E+I+ F+K GL+DL++SR +F WG+ + DP++++YVWIDALTNY+T Sbjct: 195 SHPDFIEPANRMTEMINNFIKPGLEDLAVSRTSFTWGVPVKSDPKHVVYVWIDALTNYIT 254 Query: 241 TTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GY + + KFWPAD+ ++GK+I+RFH IYWP L + LPLPKKVF HG++L K Sbjct: 255 ALGYATGDSEDLFNKFWPADVQMVGKEIVRFHTIYWPIILHALGLPLPKKVFGHGWLLMK 314 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GNVI P ++E G+DALRY+LV+ + G DG + + RVN DLAN +G Sbjct: 315 DGKMSKSKGNVIYPETLVERYGLDALRYYLVKAMPYGNDGLFTPEDFVARVNYDLANDLG 374 Query: 360 NLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 NL++R+++MI K DG +P TE D + + + ++ M + + ALA+V Sbjct: 375 NLLNRTIAMINKYEDGQLPAFKAGVTEFDADLEATAATTIKNFNACMDSLHLSDALAEVW 434 Query: 419 SLVSEVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 LVS ++Y D PW+L K+ + D+ ++V+ +R +A L+ + +IF Sbjct: 435 KLVSRTNKYIDETAPWQLAKSDDANDADKLASVMAHLAASLRVIASLISPVMTHAPKEIF 494 Query: 475 DILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509 L + L L G + PIFPR Sbjct: 495 TQLGLDPATLAIADLQLADLPAGAQVVAKGTPIFPR 530 >gi|227522370|ref|ZP_03952419.1| methionine--tRNA ligase [Lactobacillus hilgardii ATCC 8290] gi|227090428|gb|EEI25740.1| methionine--tRNA ligase [Lactobacillus hilgardii ATCC 8290] Length = 675 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/519 (39%), Positives = 313/519 (60%), Gaps = 12/519 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + + YI+T I YP+ + HIG++Y I D +AR+ R G DV F TGTDEHG KI + Sbjct: 3 ESKPTFYITTPIYYPSGRLHIGNSYTTIACDAVARYKRAMGYDVFFLTGTDEHGLKIEQK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A G+ + +VD+ ++ +++ L+IS FIRTT+ H +++++ D+GDIY Sbjct: 63 ADKLGMAPQAYVDKMAKGIKELWKKLEISNTKFIRTTDDYHEKAVADIFQQLQDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y+GWYS+ DE Y+ + EVY+ DG+ + + VQ + E+ YFF++S Y D Sbjct: 123 GEYTGWYSVSDEEYFTESQLAEVYRDDDGKVIGGKAPSGHEVQLVHEQSYFFKMSKYADW 182 Query: 176 LLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L YY+ HP+FI P R NE+I +F+ GL+DL++SR TF WG+ + DP++++YVWIDA Sbjct: 183 LRQYYQDHPDFIQPSTRMNEMIKNFIDPGLEDLAVSRTTFHWGVPVKSDPKHVVYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY D K+WPAD+ ++GK+I+RFH IYWP L + LPLPK V+ HG Sbjct: 243 LSNYITALGYDGKDDSDFKKYWPADVQMVGKEIVRFHTIYWPIILHALGLPLPKTVYGHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 ++L K K+SKS GNVI P +++ G+DALRY+L+R + DG + + RVN DL Sbjct: 303 WLLMKDGKMSKSKGNVIYPETLMDRYGLDALRYYLLRAMPYANDGIFTPEDFVDRVNFDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+VSMI K G+IP E+D+ + V + +++M + A Sbjct: 363 ANDLGNLLNRTVSMINKYEGGIIPGFKAGVNEADKELEEVSKESIVSFKKSMDDLHFSEA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L++V LVS+ ++Y D +PW L K + D+ ++V+ +R +A L+ + Sbjct: 423 LSEVWKLVSQSNKYIDQTEPWVLAKNDADKEKLASVMSHLAASLRVIAELISPIMTHAPK 482 Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509 +IF L + DE ++LD L G PIFPR Sbjct: 483 EIFQQLGL-DEAIDIKNLDISDLPTGAKTVAKGTPIFPR 520 >gi|302328190|gb|ADL27391.1| methionine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 693 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 180/472 (38%), Positives = 296/472 (62%), Gaps = 8/472 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + + Y++T I Y N PHIGH+Y ++AD+L RFH++ G F TGTDEHGQK+ + Sbjct: 1 MCDMKNFYVTTPIYYVNDAPHIGHSYTTVLADILTRFHKIIGYQTFFLTGTDEHGQKVQR 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA VT + VD+ F D+ ++I D FIRTT H + +K+ DKG+IY Sbjct: 61 AAAKRNVTPQEHVDEYYHRFEDLWKKMNIQNDFFIRTTMPEHKAYVQECLQKLWDKGEIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 Y GWYS+ +E ++++DE+ + + H PV+W++E+ YFF++SAYQ KL+ Y Sbjct: 121 SKEYEGWYSVGEERFFSEDEL---DENKCDPISHRPVEWLKEKNYFFKMSAYQQKLIDYL 177 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238 ESH ++I+P R NE+ F++ L DL +SR WGI +P DP Y+ YVW DAL NY Sbjct: 178 ESHKDWIVPDYRWNEIRGFLRQPLNDLCISRPKIRLSWGIPLPFDPDYVTYVWFDALLNY 237 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG-FIL 297 ++ + WPA H+IGKDIL H++YWP L++ ++PLP+ + +HG +++ Sbjct: 238 VSASTAFHKTYADGTPIWPASYHLIGKDILTTHSVYWPTMLMALDIPLPQHILAHGWWLV 297 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 + GEK+SKS GNV++P++ +E+ G+DA RYFL RE+ G+D + +G +R+N+DLAN Sbjct: 298 NGGEKMSKSAGNVVNPMDYMEKYGIDAFRYFLAREMVVGQDANFTHEGFVRRINSDLAND 357 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 +GN+++R ++L ++ G++P P A ++ ++++ +RV + E + + + + ++ Sbjct: 358 LGNVLNRVHRLVLTNFGGVLPAPNALDDAANEVITIANRVRTNVMEWVPQVKLSQVVEEI 417 Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVP 467 ++LV ++RY + + PW+L K + D +TVLY++ E +R +L +P Sbjct: 418 MTLVRSINRYLEIKAPWKLAKDESKKDELATVLYISAEAVRLSLSMLWPVIP 469 >gi|308234123|ref|ZP_07664860.1| methionyl-tRNA synthetase [Atopobium vaginae DSM 15829] gi|328943653|ref|ZP_08241118.1| methionine--tRNA ligase [Atopobium vaginae DSM 15829] gi|327491622|gb|EGF23396.1| methionine--tRNA ligase [Atopobium vaginae DSM 15829] Length = 542 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 199/486 (40%), Positives = 300/486 (61%), Gaps = 20/486 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +I+T I Y NA PH+G AY I+ADV AR+ R+ G +V F TG DEHGQK+A+AA + Sbjct: 10 FITTPIYYVNAAPHLGTAYCTILADVQARYRRMMGYNVKFLTGMDEHGQKVAEAAAAHNL 69 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + + D + F ++ L+ISYDDFIRTTE R + + LW ++ + G +YKG Y GW Sbjct: 70 SPQAWCDSQAPLFTNLWKKLEISYDDFIRTTEPRQYKAVQELWNRMKETGYLYKGSYDGW 129 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQH------NPVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y +E Y+ + +V K A+ Q ++ P+Q ++EE YFF+LSA+QDKLL+ Y+ Sbjct: 130 YCTPEETYFTETQVSKAAEAQQSEGENLCPDCGRPLQRVKEESYFFKLSAFQDKLLALYD 189 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEF+ P R NEV SFV SGL+DLS+SR +FDWGI +P D +++ YVW DAL NY+T+ Sbjct: 190 EHPEFVQPAFRMNEVRSFVASGLQDLSVSRTSFDWGIPVPFDIKHVTYVWFDALLNYMTS 249 Query: 242 TGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 Y + SK +F WPA HV+GKDI+RFH + WPA L++ LP+ VF+HGF+ Sbjct: 250 VRYGLDDAASKDEFAFRWPAQCHVVGKDIIRFHCVIWPAMLMALGEALPQSVFAHGFLTV 309 Query: 299 K------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 + EK+SKS GN I P EVI+++GV+ RY+ + ++ G+D + +++ NA Sbjct: 310 RNPQTGNAEKMSKSRGNAIAPAEVIDKLGVEGYRYYFMTDVTHGEDSAISFERMEQVYNA 369 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN GNLVSR+++M K +DG P + + + + R+ + ++NM++ Sbjct: 370 DLANSWGNLVSRTITMCDKYFDGKTPVVDDTWKQQTSPLRDIAQRMFEPYQKNMESMNFA 429 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV---TVEVIRQLAILLQAFVPK 468 A V+ LV + Y + PW + K +P RA + ++ +E IR A LL F+P+ Sbjct: 430 AAKDVVMELVHAANHYIEDMAPWNVAK-DPTRAEELRFILLNLLESIRIAAHLLAPFMPE 488 Query: 469 LANKIF 474 ++++ Sbjct: 489 TSHEVL 494 >gi|303261460|ref|ZP_07347408.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|303266261|ref|ZP_07352152.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|303268700|ref|ZP_07354490.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|301801632|emb|CBW34330.1| methionyl-tRNA synthetase [Streptococcus pneumoniae INV200] gi|302637594|gb|EFL68081.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|302641760|gb|EFL72117.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|302644191|gb|EFL74447.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS457] Length = 665 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 207/522 (39%), Positives = 317/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D ++ V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAEVAEQSIADYHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ +R +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + DE ++L P + PIFPR Sbjct: 480 SRAVLTQLGL-DEVASLENLSLADFPADVTVVAKGTPIFPRL 520 >gi|182683707|ref|YP_001835454.1| methionine--tRNA ligase [Streptococcus pneumoniae CGSP14] gi|182629041|gb|ACB89989.1| methionine--tRNA ligase [Streptococcus pneumoniae CGSP14] Length = 679 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 207/522 (39%), Positives = 317/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 15 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 74 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 194 RLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 254 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 313 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 373 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D ++ V + + + +M+ Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAEVAEQSIADYHTHMEAVDYP 433 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ +R +A L++ F+ + Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 493 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + DE ++L P + PIFPR Sbjct: 494 SRAVLTQLGL-DEVASLENLSLADFPADVTVVAKGTPIFPRL 534 >gi|162448397|ref|YP_001610764.1| hypothetical protein sce0127 [Sorangium cellulosum 'So ce 56'] gi|161158979|emb|CAN90284.1| metG1 [Sorangium cellulosum 'So ce 56'] Length = 696 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 209/535 (39%), Positives = 301/535 (56%), Gaps = 43/535 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + Y++T I Y N PH+G AY I ADVL R+HRL G + TGTDEHG KI +AA+ Sbjct: 4 RFYVTTPIYYINDVPHLGTAYTTIAADVLCRYHRLRGHESRMLTGTDEHGLKIQRAAEAR 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV D+ + FR L + DDFIRT+E RH + LW +I +GDIY G Y Sbjct: 64 GVAPGAHADEIAAVFRATWPKLGCAPDDFIRTSEPRHKKAVQELWSRIKARGDIYLGHYE 123 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y + EAYY + ++ + G P + ++EE YFFRLS Y D LL YY+ +P Sbjct: 124 GLYCVGCEAYYTEKDLEQ--PGNVCPLHKKPAESVKEESYFFRLSRYGDALLDYYKRNPT 181 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 F+ P R NEV+SFV+ GL+DLS+SR TF+WGI +PDDP+++MYVW DAL NY+T L Sbjct: 182 FVQPASRLNEVVSFVREGLQDLSVSRTTFEWGIPVPDDPKHVMYVWFDALANYMTA---L 238 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN---LPLPKKVFSHGFILHKGEK 302 P+ +FWPAD+H++GKDILRFHA+YWPAFLLSA LP++VF+HGF+ + G+K Sbjct: 239 REPE-DNTRFWPADVHLVGKDILRFHAVYWPAFLLSAGYGEAELPRQVFAHGFLTYSGQK 297 Query: 303 ISKSLGNVIDPIEV---------------------IEEVGVDALRYFLVREIACGKDGFY 341 +SK+L N I P+EV VGVD +RY L+R I+ G+DG + Sbjct: 298 MSKTLRNTISPVEVATALSEAAAAALPGGPGAAAGAPLVGVDVVRYCLMRAISFGQDGDF 357 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 + R ++L N +GNL++R + + +P GA +E + + Sbjct: 358 SLQDVLSRYGSELGNALGNLLNRVLP-----FAEEVPAKGALGPLEEELAGAQRQAAAAA 412 Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461 RAL + ++++ + Y D PW KKT+P R T++ +E + ++++ Sbjct: 413 ATAFDANQPTRALDAIWTVIAAANLYIDKAAPWVAKKTDPARLGTIIATLIEQLEAISVM 472 Query: 462 LQAFVPKLANKIFD------ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + +P +A ++ + I F +R +L R PG LH+ PIFPR Sbjct: 473 ISPVMPVVAGRMREQLGLPPIAFEEGSDRWPMALPSR-APGEKLHRG-SPIFPRL 525 >gi|328946604|gb|EGG40742.1| methionine--tRNA ligase [Streptococcus sanguinis SK1087] Length = 665 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 200/521 (38%), Positives = 315/521 (60%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI Sbjct: 1 MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQA 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ +G++ + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 61 KAEESGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ +G+ + V+W+ EE YF RLS YQD Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG +P T+ D ++ V S + + ++M Sbjct: 361 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGALAQVASESIADYYKHMDAVDYP 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K + V+ V +R +A +++ F+ + Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDEAKVKELAAVMSHLVASLRVVAHMIEPFMMET 480 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L + +L G + + PIFPR Sbjct: 481 SQAVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 521 >gi|325696277|gb|EGD38168.1| methionine--tRNA ligase [Streptococcus sanguinis SK160] Length = 679 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 200/521 (38%), Positives = 314/521 (60%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI Sbjct: 15 MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQA 74 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG++ + +VD + +++ ++L+ISYD FIRTT+ H +++++ + DIY Sbjct: 75 KAEEAGISPQAYVDGMAVGVKELWNLLNISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 134 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ +G+ + V+W+ EE YF RLS YQD Sbjct: 135 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 194 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 195 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 254 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 255 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 314 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + R+N Sbjct: 315 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINY 374 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG +P T+ D + V S + + ++M Sbjct: 375 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGPLAQVASESIADYYKHMDAVDYP 434 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K T + V+ +R +A ++ F+ + Sbjct: 435 RALEAVWTLISRTNKYIDETAPWVLAKDETKVKELAAVMSHLASSLRVVAHMIDPFMMET 494 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L + +L G + + PIFPR Sbjct: 495 SKAVLSQLGLPQATSLENLAIDQLPSGLTVVEKGTPIFPRL 535 >gi|119512207|ref|ZP_01631297.1| methionine-tRNA ligase [Nodularia spumigena CCY9414] gi|119463173|gb|EAW44120.1| methionine-tRNA ligase [Nodularia spumigena CCY9414] Length = 533 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 201/480 (41%), Positives = 297/480 (61%), Gaps = 11/480 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K ++ ++T + Y N PH+G AY I ADV+ARFHRL G +VL TGTDEHGQKI ++ Sbjct: 6 KTEKRFALTTPLYYVNDVPHVGSAYTTIAADVVARFHRLLGHEVLLITGTDEHGQKIQRS 65 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A++ G + F DQ +F + +L+I YD F RTT RH + + ++ +KGDIY+ Sbjct: 66 AESLGKPPQEFCDQIVPSFIKLWQLLNIQYDRFSRTTASRHEAIVKEFFMRVWEKGDIYQ 125 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 G GWY + E + + ++ +G + + V+W +E+ YFF LS YQ +L +Y+ Sbjct: 126 GKQKGWYCVSCEEFKEERDLLEGKRCPIHTNKE--VEWRDEQNYFFSLSKYQTQLEEFYQ 183 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 S P+FI P RRNEV+SFV GL+D S+SR DWG ++P D Q+ +YVW DAL Y+T Sbjct: 184 SRPDFIQPESRRNEVLSFVSQGLQDFSISRVNLDWGFRVPVDSQHTLYVWFDALLAYVTA 243 Query: 242 TGYLD-NPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 D P + A +WP +LH+IGKDILRFHA+YWPA L+SA LPLP +VF HGF+ Sbjct: 244 LLEADAEPTLANALETWWPINLHLIGKDILRFHAVYWPAMLMSAGLPLPDQVFGHGFLTK 303 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 G+K+ KSLGN +DPI ++E G DA+RY+ ++EI GKDG +++ +NADLAN + Sbjct: 304 DGQKMGKSLGNTLDPIGLVESYGSDAVRYYFLKEIEFGKDGDFNEVRFINVLNADLANDL 363 Query: 359 GNLVSRSVSMILK--DYDGMIPTPGAFTESDESILSVCSRVL-QEIRENMQNQLIHRALA 415 GNL++R+++M+ K DG+ T G +DE+ L L ++++++ Q ++A Sbjct: 364 GNLLNRTLNMVKKYCSNDGL--TIGNEAINDENPLKAIGLGLGEQVKQSYQALAFNQACE 421 Query: 416 QVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + LV +++ D Q PW L K+ TVLY +E +R A LL +P ++N I+ Sbjct: 422 ATLLLVRTCNKFIDEQAPWSLYKQGKQQEVETVLYAVLESVRLAAYLLSPVIPNISNAIY 481 >gi|303255799|ref|ZP_07341840.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|303260254|ref|ZP_07346225.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|303264128|ref|ZP_07350049.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS397] gi|302597183|gb|EFL64288.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|302638578|gb|EFL69042.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|302646533|gb|EFL76759.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS397] Length = 665 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 207/522 (39%), Positives = 317/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D ++ V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAEVAEQSIADYHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ +R +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + DE ++L P + PIFPR Sbjct: 480 SRAVLTQLGL-DEVASLENLSLADFPADVTVVAKGTPIFPRL 520 >gi|324994961|gb|EGC26874.1| methionine--tRNA ligase [Streptococcus sanguinis SK678] gi|327462997|gb|EGF09318.1| methionine--tRNA ligase [Streptococcus sanguinis SK1] Length = 665 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 199/521 (38%), Positives = 316/521 (60%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG++ + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 61 KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ +G+ + V+W+ EE YF RLS YQD Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVIYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 241 ALLNYATALGYGQDNHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K ++G +P T+ D ++ V ++ + + ++M Sbjct: 361 ELANDLGNLLNRTVSMINKYFNGQVPAYEENVTDFDGALAQVAAQSIADYYKHMDAVDYP 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K T + V+ +R +A ++ F+ + Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDETKVKELAAVMSHLASSLRVVAHMIDPFMMET 480 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L + +L G + + PIFPR Sbjct: 481 SKAVLSQLGLPQATSLENLAIDQLPSGLTVVEKGTPIFPRL 521 >gi|227528869|ref|ZP_03958918.1| methionyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540] gi|227351192|gb|EEJ41483.1| methionyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540] Length = 675 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 204/521 (39%), Positives = 313/521 (60%), Gaps = 13/521 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +++ YI+T I YP+ + HIG+ Y + D AR+ RL G DV + TGTDEHG KI + Sbjct: 3 EQKPTYYITTPIYYPSGKLHIGNTYTTVACDAEARYKRLMGYDVFYLTGTDEHGLKIEQK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G + +VD+ + + + ++I+ D FIRTT+ H + +++K D+GDIYK Sbjct: 63 AEKLGKQPQEYVDEMAAGIKKLWKTMEITNDKFIRTTDDYHEKAVQKIFQKFVDQGDIYK 122 Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + EVY+ +G + + VQ +EEE YFF++S Y D Sbjct: 123 GKYKGWYSVDDEEYFTESQLAEVYRDDNGNVIGGKAPSGHEVQLVEEESYFFKMSKYSDW 182 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L++YY+ HP+FI P R NE+++ F+K GL+DL+++R +F+WG+K+P+DP++++YVWIDA Sbjct: 183 LMNYYKEHPDFIEPHTRVNEMVNNFLKPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + D K+WPAD+H++GK+I+RFH IYWP L + LPLPK V HG Sbjct: 243 LSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHVIGHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 ++ K K+SKS GNVI P ++ G+DA RY+L++ + G DG + + +VN DL Sbjct: 303 WLTMKDGKMSKSKGNVIYPETLVNRYGLDATRYYLLKAMPFGNDGVFSPEDFVDKVNYDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K DG ++ A TE D + + + E + M A Sbjct: 363 ANDLGNLLNRTVAMINKYQDGKLVAQNDATTEYDTDLEQTAANAIAEFKAEMDRVHFADA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L+ V LVS ++Y D +PW L K +A S V+ + +R +A L+Q + Sbjct: 423 LSAVWKLVSRANKYIDETEPWVLAKDESKKAELSDVMTHLAKSLRVIAALIQPIMTHAPK 482 Query: 472 KIFDILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 +I L + N +L D + ++ K PIFPR Sbjct: 483 EIITQLGLEGTNLDLTTLQFDDFPETAQVVAKG-TPIFPRL 522 >gi|257460335|ref|ZP_05625436.1| methionyl-tRNA synthetase [Campylobacter gracilis RM3268] gi|257441666|gb|EEV16808.1| methionyl-tRNA synthetase [Campylobacter gracilis RM3268] Length = 665 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 213/514 (41%), Positives = 314/514 (61%), Gaps = 23/514 (4%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI T I Y N PHIGHAY IIAD +ARF+RL G +V F TGTDEHGQKI +AA Sbjct: 2 KKYIMTPIYYVNDVPHIGHAYTTIIADTMARFYRLQGHEVFFKTGTDEHGQKIEEAAAKH 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + K + D S F+D+ D DISYD F RTT+ H + +++K+ +KGDIYKG Y Sbjct: 62 AQSPKQYADGVSAKFKDLWDEFDISYDMFSRTTDAAHEAAVQNVFRKMYEKGDIYKGEYE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y + E+++ ++ DG+Y + ++EE YFFRLSAY ++LL +YE + Sbjct: 122 GNYCVSCESFFPSAQLI---DGEYCPDCGKKTKILKEESYFFRLSAYAERLLKWYEDE-K 177 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTT 242 ILP+ ++NEVISFVKSGLKDLS++R FDWG+KIP +DP++++YVW+DAL +YL++ Sbjct: 178 CILPLGKKNEVISFVKSGLKDLSITRTGFDWGVKIPPELNDPKHVIYVWLDALMDYLSSL 237 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 G+ G + ++W LH++GKDILRFHA+YWPAFL+S L +P+ + +HG+ G+K Sbjct: 238 GFCAG--GERMEYWSDALHIVGKDILRFHAVYWPAFLMSLGLNMPRSIAAHGWWTRDGKK 295 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKSLGNV+DP EV G++ RYFL+RE+ G+DG + + + RVN++LAN +GNL+ Sbjct: 296 MSKSLGNVVDPREVANAYGLEQFRYFLLREVPFGQDGDFSQKAIINRVNSELANELGNLL 355 Query: 363 SRSVSMILKDYDGMIPTP------GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 SR V M K D +I + A + S LS L+E+ N + + RALA Sbjct: 356 SRIVGMSAKYSDYVINSKDVMKFFTAEIKEANSYLSAAISALEEVATNRYLEELWRALAL 415 Query: 417 VISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + +++ + PW L K +A ++ + ++ ++A+LL +PK A +I D Sbjct: 416 ANASIAKYE-------PWNLIKNGEQAKALALVALVANILAKVAVLLSPAMPKTAARIAD 468 Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 L ++ L R + K +P+F + Sbjct: 469 TLGFEISTPLYEKLVLRGEILDFKAKPCEPLFTK 502 >gi|317490262|ref|ZP_07948750.1| methionyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] gi|316910756|gb|EFV32377.1| methionyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] Length = 529 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 201/480 (41%), Positives = 283/480 (58%), Gaps = 7/480 (1%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 +T I Y NA PH+G AY I AD +AR+ R++G DV F TG DEHGQK+A A + G+T Sbjct: 8 FTTPIYYVNAAPHLGTAYTTIAADTVARYQRMNGYDVAFVTGMDEHGQKVADTAADKGMT 67 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + + D FRD D+L I+Y DF+RTTE RH T + W+ + D+G YKG Y GWY Sbjct: 68 PQDWCDSMEPAFRDAWDMLGITYTDFVRTTEPRHARTVQKFWQDLYDRGWCYKGSYEGWY 127 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWM-EEEGYFFRLSAYQDKLLSYYESHPEF 186 + +E YY + ++ K DG+ PVQ EE +FF+LS + DKLL++YE +P+F Sbjct: 128 CVHEETYYAESDLEKNEDGELVCPDCKRPVQKAGGEENWFFKLSEFGDKLLAFYEENPDF 187 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P R+NE++SFVKSGLKDLS+SR TFDWG+ +P D ++ YVW DAL YLT GY D Sbjct: 188 IRPETRKNEIVSFVKSGLKDLSISRSTFDWGVPLPFDEGHVAYVWADALLAYLTGIGYGD 247 Query: 247 NPD--GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + G WP H +GKDI RFH + WPA L++A LP+ VF HGF+L KGEK+S Sbjct: 248 EGERAGEFDARWPMQYHFVGKDITRFHCVIWPAMLMAAGLPITHTVFGHGFLLTKGEKMS 307 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GN + P ++ + GVDA RY+ + ++ G DG + + + NADLAN GNL SR Sbjct: 308 KSKGNALKPADLCKVFGVDAYRYYFMSDVQFGADGSISMERMVQVYNADLANTWGNLCSR 367 Query: 365 SVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 +M K +DG +P P ++ + ++ + E + A A V L Sbjct: 368 VFNMTKKYFDGQVPEVPAEVLANENPLRAITEELYAEYDAALGAVDFTAAAAAVQKLAGR 427 Query: 424 VDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 V+ Y + PW L K+ + V+Y +E IR +A+ + F+P + ++F L + D Sbjct: 428 VNLYVEESAPWNLAKSEETAGELAEVIYNALEAIRIIALYMAPFMPNTSAEVFRRLSLGD 487 >gi|221195624|ref|ZP_03568678.1| methionyl-tRNA synthetase [Atopobium rimae ATCC 49626] gi|221184390|gb|EEE16783.1| methionyl-tRNA synthetase [Atopobium rimae ATCC 49626] Length = 537 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 207/531 (38%), Positives = 316/531 (59%), Gaps = 26/531 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ +I+T I Y NA+PH+G AY ++ DV ARF R G DVLF TG DEHG+K+A+AA Sbjct: 5 KQPYFITTPIYYVNAKPHLGTAYCSLLCDVQARFRRAAGYDVLFLTGMDEHGEKVAQAAA 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + D + F+D+ D L++SYDDFIRTTE R + + LW+++ D G IYKG Sbjct: 65 EHGMEPQAWCDSQAPYFKDLWDELEVSYDDFIRTTEPRQYRAVQYLWERMRDSGYIYKGS 124 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY + +E Y+ + +V K + Q Q H P++ + EE +FF+LS +QD+LL Sbjct: 125 YDGWYCVHEETYFTETQVEKADEEQGTKGQHLCPDCHRPLERVTEESWFFKLSEFQDRLL 184 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237 YE HPEF+ P R NEV SFV+SGL+D+S+SR +FDWGI +P D ++ YVW DAL N Sbjct: 185 KLYEEHPEFVEPDFRLNEVRSFVESGLQDVSVSRTSFDWGIPVPFDEGHVTYVWFDALLN 244 Query: 238 YLTTTGYLDN-PDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 Y T GY D+ P+ + +A+FWPA +HV+GKDI+RFH + WPA L++ +P++VF+HG Sbjct: 245 YYTAVGYGDDSPEAAALRARFWPAQMHVVGKDIIRFHCVIWPAMLMALGESVPERVFAHG 304 Query: 295 FILHKG------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348 F+ + EK+SKS GN I P +V++ +GV+ RY+ + ++ G+D + +++ Sbjct: 305 FLNVRNSETGAIEKMSKSRGNAIAPEDVVKLLGVEGYRYYFMTDVVPGEDSGISFERMEQ 364 Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQN 407 NADLAN GNLVSRS++M K + G P GA + ++ + M + Sbjct: 365 VYNADLANSWGNLVSRSLNMSDKYFAGCTPHVDGALISDKNPLKALADGIYGRYATCMDH 424 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQA 464 A V+ LV + Y + PW + K +P R S ++Y +E IR A LL Sbjct: 425 MNYVGAKDVVMELVHAANHYIEESAPWNVAK-DPARVSELAEIIYSLLEAIRISAHLLMP 483 Query: 465 FVPKLANKIFDILFVADENRCFQSLDQ-----RLKPGFMLHKTFDPIFPRF 510 F+P + ++ + + ++ +L++ +L G + K + +FPR Sbjct: 484 FMPTTSAEVLSRMSLGEDEITSCALEKDCTWGKLSGGLAVTKG-EALFPRL 533 >gi|312864247|ref|ZP_07724481.1| methionine--tRNA ligase [Streptococcus vestibularis F0396] gi|311100248|gb|EFQ58457.1| methionine--tRNA ligase [Streptococcus vestibularis F0396] Length = 667 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 208/523 (39%), Positives = 315/523 (60%), Gaps = 23/523 (4%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+ + HIG AY I DVLAR+ R+ DV + TG DEHGQKI + A+ AG Sbjct: 5 FYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEEAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + +VD + +D+ +LDISYD FIRTT+ H +++++ ++GDIY G YSG Sbjct: 65 ITPQEYVDGMAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEQGDIYLGEYSG 124 Query: 127 WYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 WYS+ DE ++ + EVY+ G + V+ + EE YFF+LS Y D+L +++ Sbjct: 125 WYSVSDEEFFTESQLAEVYRDEQGNVIGGIAPSGHEVELVSEESYFFKLSNYADRLTAFF 184 Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 + HPEFI P R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL NY+ Sbjct: 185 KEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDALINYI 244 Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 T GY + G+ FW D +H+IGKDILRFH+IYWP L++ +LPLP ++ +HG Sbjct: 245 TALGYGQDEHGNFDLFWQNDENHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVAHG 304 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + + K K+SKS GNVI P ++E G+D LRY+L+R + G DG + + R+N +L Sbjct: 305 WFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINYEL 364 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K + G +P T+ D + V + ++E + M RA Sbjct: 365 ANDLGNLLNRTVAMINKYFGGQVPVYVENVTDFDADLAKVVAENIEEFHKQMNAVDFPRA 424 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L V +++S ++Y D PW L K + D+ + V+ +R +A L+Q F+ +N Sbjct: 425 LDAVWNIISRTNKYIDETAPWVLAKEDGDKEQLAAVMAHLAASLRVVAHLVQPFMMTTSN 484 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510 I + L + L+ GF + T PIFPR Sbjct: 485 AIMEQLGLP----VVFDLENLELSGFPENVTVVSKGTPIFPRL 523 >gi|327490158|gb|EGF21946.1| methionine--tRNA ligase [Streptococcus sanguinis SK1058] Length = 665 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 199/521 (38%), Positives = 315/521 (60%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG++ + +VD + + + +LDISYD FIRTT+ H +++++ + DIY Sbjct: 61 KAEEAGISPQAYVDSMAVGVKKLWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ +G+ + V+W+ EE YF RLS YQD Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVIYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 241 ALLNYATALGYGQDNHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K ++G +P T+ D ++ V ++ + + ++M Sbjct: 361 ELANDLGNLLNRTVSMINKYFNGQVPAYEENVTDFDGALAQVAAQSIADYYKHMDAVDYP 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K T + V+ +R +A ++ F+ + Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDETKVKELAAVMSHLASSLRVVAHMIDPFMMET 480 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L + +L G + + PIFPR Sbjct: 481 SKAVLSQLGLPQATSLENLAIDQLPSGLTVVEKGTPIFPRL 521 >gi|229816447|ref|ZP_04446748.1| hypothetical protein COLINT_03500 [Collinsella intestinalis DSM 13280] gi|229807989|gb|EEP43790.1| hypothetical protein COLINT_03500 [Collinsella intestinalis DSM 13280] Length = 548 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 199/490 (40%), Positives = 296/490 (60%), Gaps = 21/490 (4%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + YI+T I Y NA PH+G AY IIADV AR+ R G +V F TG DEHGQK+A+ Sbjct: 16 MSSKPSYYITTPIYYVNADPHLGTAYSTIIADVQARYRRAAGYNVKFLTGMDEHGQKVAE 75 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ G+T + + D + +F ++ + L+IS DDFIRTTE R + LW+++ + G IY Sbjct: 76 AAEKHGMTPQEWCDSQAPHFHELWEELEISNDDFIRTTEPRQKRAVQYLWERMQEAGYIY 135 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH------NPVQWMEEEGYFFRLSAYQD 174 KG Y GWY + DE ++ + +V K + + +H P++ ++EE +FF+LSA+QD Sbjct: 136 KGSYDGWYCVPDETFFTETQVDKADEARGTKGEHLCPDCDRPLERVKEESWFFKLSAFQD 195 Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 KLL+ Y+ HP+F+ P R NEV SFV+ GL DLS+SR +FDWGI++P D +++ YVW DA Sbjct: 196 KLLALYDEHPDFVQPDFRMNEVRSFVEGGLNDLSVSRTSFDWGIEVPFDDEHVTYVWFDA 255 Query: 235 LTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291 L NY+T GY D + A F WPA H++GKDI+RFH + WPA L++ LP+ VF Sbjct: 256 LINYMTAVGYGAEGDEAAADFAYRWPAQTHIVGKDIIRFHCVIWPAMLMALGEALPEHVF 315 Query: 292 SHGFI------LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345 +HGF+ K EK+SKS GN I P EVIE++GV+ RY+ + ++ G DG Sbjct: 316 AHGFLTVKNEETGKAEKMSKSRGNAIAPREVIEKLGVEGYRYYFMTDVTPGTDGAISFGR 375 Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--SDESILSVCSRVLQEIRE 403 +++ NADLAN GNL+SRS +M +K ++G P A ++ + S + + Sbjct: 376 MEQVYNADLANSWGNLISRSTNMCIKYFEGATPERAADAAGYAENPLASAAEGIFERYAA 435 Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAI 460 M+ A +++ L+ + Y + +PW L K +P +A + V++ +E IR A Sbjct: 436 KMEAFAYGDAAKEIMDLIHAANHYIEDSEPWTLAK-DPAKAGELANVIWNLLEAIRISAH 494 Query: 461 LLQAFVPKLA 470 LL +P + Sbjct: 495 LLMPLMPSTS 504 >gi|168488458|ref|ZP_02712657.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|183573094|gb|EDT93622.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|332073087|gb|EGI83566.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA17570] Length = 665 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 207/522 (39%), Positives = 317/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T +V+VD+ + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQVYVDRMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 CLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D + V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ IR +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + +E ++L P + PIFPR Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520 >gi|15606482|ref|NP_213862.1| methionyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5] gi|7388279|sp|O67298|SYM_AQUAE RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|78101749|pdb|2CSX|A Chain A, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna Synthetase Complexed With Trna(Met) gi|78101750|pdb|2CSX|B Chain B, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna Synthetase Complexed With Trna(Met) gi|78101753|pdb|2CT8|A Chain A, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna Synthetase Complexed With Trna(Met) And Methionyl-Adenylate Anologue gi|78101754|pdb|2CT8|B Chain B, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna Synthetase Complexed With Trna(Met) And Methionyl-Adenylate Anologue gi|2983692|gb|AAC07256.1| methionyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5] Length = 497 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 207/498 (41%), Positives = 299/498 (60%), Gaps = 20/498 (4%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K Y++T I Y N PH+GHAY I AD +AR++RL DV F TGTDEHG KI K A+ Sbjct: 5 KKFYVTTPIYYVNDVPHLGHAYTTIAADTIARYYRLRDYDVFFLTGTDEHGLKIQKKAEE 64 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ K VD+N+ F+ + + L I Y FIRTT+ H + ++++ +GDIY G Y Sbjct: 65 LGISPKELVDRNAERFKKLWEFLKIEYTKFIRTTDPYHVKFVQKVFEECYKRGDIYLGEY 124 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY + E + ++ E+ A+ ++++E YFFRLS YQDKLL YE +P Sbjct: 125 EGWYCVGCEEFKSEAEL---AEDHTCPIHQKKCEYIKEPSYFFRLSKYQDKLLELYEKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 EFI P RRNE+ISFVK GLKDLS++R WGI +P DP++ +YVW DAL NY++ Sbjct: 182 EFIQPDYRRNEIISFVKQGLKDLSVTRPRSRVKWGIPVPFDPEHTIYVWFDALFNYISAL 241 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 + +WPADLH++GKDILRFH +YWPAFL+S LPKKVF+HG+ +G+K Sbjct: 242 ------EDKVEIYWPADLHLVGKDILRFHTVYWPAFLMSLGYELPKKVFAHGWWTVEGKK 295 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SK+LGNV+DP EV++E G+D +RYFL+RE+ G+DG + K + R+N +LAN IGNL Sbjct: 296 MSKTLGNVVDPYEVVQEYGLDEVRYFLLREVPFGQDGDFSKKAILNRINGELANEIGNLY 355 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR V+M K G + GA DE + ++ M+ ++A+ +++ S Sbjct: 356 SRVVNMAHKFLGGEV--SGA---RDEEYAKIAQESIKNYENYMEKVNFYKAIEEILKFTS 410 Query: 423 EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 +++Y D ++PW L K+ + VLY V+ + L LL P NK+ + L + Sbjct: 411 YLNKYVDEKQPWALNKERKKEELQKVLYALVDGLFVLTHLLYPITP---NKMKEALQMLG 467 Query: 482 ENRCFQSLDQRLKPGFML 499 E + L K + L Sbjct: 468 EKEFLKELKPYSKNTYKL 485 >gi|71415852|ref|XP_809978.1| methionyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener] gi|70874442|gb|EAN88127.1| methionyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 765 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 207/495 (41%), Positives = 288/495 (58%), Gaps = 18/495 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 +I+T I Y NA PHIGH Y +I DV+ R+H + G V +GTDEHGQK+A+AA+ G Sbjct: 234 FFITTPIYYVNAAPHIGHVYSTLIVDVIGRYHTMKGERVFAMSGTDEHGQKVAEAARQKG 293 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + F Q SR F D + + D FIRTT + H LW K+ KGDIY G Y G Sbjct: 294 MNPYDFTCQVSREFIDCFEQMGYHMDYFIRTTNESHKKVVHELWSKLEAKGDIYLGRYEG 353 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 WYS+ DE++ V G D + + V W+ E+ Y FRLSA++++LL +Y Sbjct: 354 WYSVSDESFLTAQNVTDGVDKDGKPCKVSLESGHVVTWLAEDNYMFRLSAFRERLLEWYN 413 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRK---TFDWGIKIPDDPQYIMYVWIDALTNY 238 ++P I+P RR EVI V+ GL DLS+SR DW I +P +P + +YVW+DAL+NY Sbjct: 414 NNPGCIVPEFRRREVIRTVEKGLNDLSVSRTREAVQDWAIPVPGNPNHCIYVWLDALSNY 473 Query: 239 LTTTGYLDNPDGSKAKF---------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289 T + G + + +PAD+HVIGKDIL+FHAIYWPAFL+SA LPLPK Sbjct: 474 YTASRLRLGKSGEELELVEDHRVLERFPADIHVIGKDILKFHAIYWPAFLISAGLPLPKT 533 Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 + +HG+ +KISKSLGNV DP+E E G DAL+YFL+RE DG Y + R Sbjct: 534 IVAHGWWTKDRKKISKSLGNVFDPVEKAREFGFDALKYFLLRETGFSDDGDYSDRNMISR 593 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 +N +LA+ +GNLV R S + + + PTP A+ DE+++ + + + Sbjct: 594 LNGELADTLGNLVMRCTSAKINVHR-VWPTPDAYNAKDEALIQLIKDLPGVVDHFFLIPD 652 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 + +ALA V L+ ++ Y PW L KT+PDR TVLY+T+E R ++L + + Sbjct: 653 VQKALAAVFDLLRAINSYVTENAPWRLVKTDPDRLRTVLYITMEGTRLATLMLSPVLSQK 712 Query: 470 ANKIFDILFVADENR 484 A IFD+L V + NR Sbjct: 713 APVIFDMLGVPEANR 727 >gi|327470507|gb|EGF15963.1| methionine--tRNA ligase [Streptococcus sanguinis SK330] Length = 665 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 199/521 (38%), Positives = 314/521 (60%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI Sbjct: 1 MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQA 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG++ + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 61 KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ +G+ + V+W+ EE YF RLS YQD Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVIYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSM+ K +DG IP T+ D ++ V + + + ++M Sbjct: 361 ELANDLGNLLNRTVSMVNKYFDGQIPAYEENVTDFDGALAQVAAESIADYYKHMDAVDYP 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K + V+ +R +A +++ F+ + Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDEAKVKELAAVMSHLAASLRVVAHMIEPFMMET 480 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L + +L G + + PIFPR Sbjct: 481 SKAVLSQLGLPQATSLENLAIDQLPAGLTVVEKGTPIFPRL 521 >gi|307151236|ref|YP_003886620.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7822] gi|306981464|gb|ADN13345.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7822] Length = 533 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 200/487 (41%), Positives = 289/487 (59%), Gaps = 12/487 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K ++T + Y N PHIG AY +IADV+AR+ RL G V+F TGTDEHGQKI + A+ Sbjct: 9 KKFALTTPLYYVNDVPHIGSAYTTMIADVIARWKRLQGYSVMFITGTDEHGQKIQRTAEA 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + DQ +F + D L+I YD F RTT K H + ++++ D+GDIY Sbjct: 69 KGLAPQEHCDQIVTSFESLWDKLNIHYDRFSRTTAKPHQSIVKEFFQRVWDQGDIYLDQQ 128 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY + E + + E+ + Q + +W +EE YFFRLS YQ KL +Y P Sbjct: 129 IGWYCVACEEFKEERELTENGSCQIHTNLK--AEWRDEENYFFRLSKYQQKLAEFYAEKP 186 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 EFI P RRNEV+SF+K GL+D S+SR DWG +P DP + +YVW DAL Y+T Sbjct: 187 EFIRPESRRNEVLSFLKQGLQDFSISRVNLDWGFPVPSDPNHTIYVWFDALLGYIT--AL 244 Query: 245 LDNPD-----GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 LD D + +++WP +LH+IGKDILRFHAIYWPA L+SA LPLP++VF HGF+ Sbjct: 245 LDPNDEPTLKNALSRWWPINLHLIGKDILRFHAIYWPAMLMSAGLPLPEQVFGHGFLTKD 304 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+ KSLGN +DP +++ DA+RY+ ++EI GKDG +++ +NADLAN +G Sbjct: 305 GLKMGKSLGNTLDPFDLLNRYSADAVRYYFIKEIEFGKDGDFNETRFVNILNADLANDLG 364 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE-IRENMQNQLIHRALAQVI 418 NL++R++ M+ K G P A + + L + L E +RE ++ ++A ++ Sbjct: 365 NLLNRTLGMVQKYCKGKGPALKATEIDNNNPLKIIGEGLSERVRECLEALKFNQACEEIF 424 Query: 419 SLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 SL+ +++ D PW L K+ +LY +E +R A LL +P L+ +I+ L Sbjct: 425 SLIRACNKFIDESAPWSLYKEKKQAEVEEILYAVLESVRLAAYLLSPIIPNLSTRIYQQL 484 Query: 478 -FVADEN 483 F D N Sbjct: 485 GFSVDFN 491 >gi|261417229|ref|YP_003250912.1| methionyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373685|gb|ACX76430.1| methionyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 690 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 179/468 (38%), Positives = 294/468 (62%), Gaps = 8/468 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + Y++T I Y N PHIGH+Y ++AD+L RFH++ G F TGTDEHGQK+ +AA Sbjct: 2 KNFYVTTPIYYVNDAPHIGHSYTTVLADILTRFHKIIGYQTFFLTGTDEHGQKVQRAAAK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 VT + VD+ F D+ ++I D FIRTT H + +K+ DKG+IY Y Sbjct: 62 RNVTPQEHVDEYYHRFEDLWKKMNIQNDFFIRTTMPEHKAYVQECLQKLWDKGEIYSKEY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWYS+ +E ++++DE+ + + H PV+W++E+ YFF++SAYQ KL+ Y ESH Sbjct: 122 EGWYSVGEERFFSEDEL---DENKCDPISHRPVEWLKEKNYFFKMSAYQQKLIDYLESHK 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 ++I+P R NE+ F++ L DL +SR WGI +P DP Y+ YVW DAL NY++ + Sbjct: 179 DWIVPDYRWNEIRGFLRQPLNDLCISRPKIRLSWGIPLPFDPDYVTYVWFDALLNYVSAS 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG-FILHKGE 301 WPA H+IGKDIL H++YWP L++ ++PLP+ + +HG ++++ GE Sbjct: 239 TAFHKTYADGTPIWPASYHLIGKDILTTHSVYWPTMLMALDIPLPQHILAHGWWLVNGGE 298 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV++P++ +E+ G+DA RYFL RE+ G+D + +G +R+N+DLAN +GN+ Sbjct: 299 KMSKSAGNVVNPMDYMEKYGIDAFRYFLAREMVVGQDANFTHEGFVRRINSDLANDLGNV 358 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R ++L ++ G++P P A ++ ++++ +RV + E + + + + ++++LV Sbjct: 359 LNRVHRLVLTNFGGVLPAPNALDDAANEVITIANRVRTNVMEWVPQVKLSQVVEEIMTLV 418 Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVP 467 ++RY + + PW+L K + D +TVLY++ E +R +L +P Sbjct: 419 RSINRYLEIKAPWKLAKDESKKDELATVLYISAEAVRLSLSMLWPVIP 466 >gi|307706348|ref|ZP_07643160.1| methionyl-tRNA synthetase [Streptococcus mitis SK321] gi|307618266|gb|EFN97421.1| methionyl-tRNA synthetase [Streptococcus mitis SK321] Length = 665 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 205/522 (39%), Positives = 320/522 (61%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP+++ + Sbjct: 240 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D ++ V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHALAEVAEQSIADYHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K ++ ++V+ +R +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRNQLASVMSHLAASLRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + + L +A E ++L+ P + PIFPR Sbjct: 480 SRAVLNQLGLA-EVSSLENLNLADFPADVTVVAKGTPIFPRL 520 >gi|160878187|ref|YP_001557155.1| methionyl-tRNA synthetase [Clostridium phytofermentans ISDg] gi|160426853|gb|ABX40416.1| methionyl-tRNA synthetase [Clostridium phytofermentans ISDg] Length = 664 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 204/491 (41%), Positives = 304/491 (61%), Gaps = 21/491 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAIAY + +PHIG+ YE+++AD +ARF RL+G +V F TGTDEHGQKI + A GV Sbjct: 7 YITTAIAYTSGKPHIGNTYEIVLADSIARFKRLEGYEVFFQTGTDEHGQKIEEKAAEVGV 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + K FVD+ + +D+ D+++ SYD FIRTT+ H + ++KK+ D+GDIYKG Y G Sbjct: 67 SPKEFVDKVAGGIKDIWDLMNSSYDKFIRTTDVDHEKQVQKIFKKLYDQGDIYKGNYEGM 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ ++ G Q +EE YF +LS Y +L+ + +HPEFI Sbjct: 127 YCTPCESFFTASQLVNGKCPDC----GRECQPAKEEAYFLKLSNYTGRLIDHINTHPEFI 182 Query: 188 LPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R+NE++ +F+ GL+DL +SR +F WGI + DP++++YVWIDAL+NY+T GY Sbjct: 183 QPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVIYVWIDALSNYITGIGY-- 240 Query: 247 NPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH---- 298 + DG+ KFWPADLH+IGKDILRFH IYWP L++ +LPLPK+VF H ++L Sbjct: 241 DCDGNSTEQFNKFWPADLHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHPWLLQTDPN 300 Query: 299 ----KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 G K+SKS GNV+ +++E GVDA+RYF++ E+ DG + + + R+N+DL Sbjct: 301 AKDGSGVKMSKSRGNVLYADDLVEFFGVDAVRYFVLHEMPFDNDGVINWELMVDRMNSDL 360 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 AN +GNLV+R++SM K ++G++ D ++ V ++ ++ M N + A+ Sbjct: 361 ANTLGNLVNRTISMSNKYFEGVVNKTDVTEPVDADLIEVVTKTRDKVVAKMANLRVADAI 420 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 +++ +L ++Y D PW L K +A VLY VE I A LL+ F+P+ A K Sbjct: 421 SEIFTLFKRCNKYIDETMPWALAKEEEKKARLENVLYNLVESICIGANLLEPFLPESAEK 480 Query: 473 IFDILFVADEN 483 I L N Sbjct: 481 ILAQLNAKKRN 491 >gi|311743181|ref|ZP_07716989.1| methionine--tRNA ligase [Aeromicrobium marinum DSM 15272] gi|311313861|gb|EFQ83770.1| methionine--tRNA ligase [Aeromicrobium marinum DSM 15272] Length = 529 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 213/528 (40%), Positives = 309/528 (58%), Gaps = 31/528 (5%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y N PHIGH Y I DVLAR+HR G V + TG DEHGQK+ + A AG Sbjct: 6 FYVTTPIYYVNDAPHIGHGYTTTIGDVLARWHRQRGEQVHYLTGVDEHGQKVLRKAAAAG 65 Query: 67 VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 V+ + +VD+ ++ M +D S DDFIRTTE RH + W+++++ G +Y+G +S Sbjct: 66 VSPQDWVDRLVETEWKPMLATIDASNDDFIRTTEPRHARGVQAFWERLNEAGAVYRGEFS 125 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQH-------NPVQWMEEEGYFFRLSAYQDKLLS 178 GWYS+ E + DD+V DG+ +A H + V+ + E YFFRLS +Q +LL Sbjct: 126 GWYSVGSEEFVGDDDVR---DGEGDDAGHRVSVLDGSRVEHVTEANYFFRLSDFQQRLLD 182 Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 +Y++HP+F+ P RNEV+SFV GL DLS+SR TFDWGI +P D +I YVWI+AL NY Sbjct: 183 FYDAHPDFVQPASARNEVVSFVSRGLTDLSISRSTFDWGIPVPWDDDHIFYVWIEALLNY 242 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 +T GY + + + WPADLH++GKDI+RFHAI WPA L++A LP+P +VF+HG+IL Sbjct: 243 VTAVGYGQD-EARFDRLWPADLHIVGKDIVRFHAIIWPAMLMAAGLPVPHRVFAHGWILV 301 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 G+K+SKS N I P ++++ G DA RY+ R + G DG + + R +A+LANG Sbjct: 302 GGQKMSKSKANGIHPDQIVQTFGSDAYRYYFTRALTFGNDGSISWEDIGARYHAELANGF 361 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNL SR +MI K + G++P GA ++ +I+ + + + H A+A V Sbjct: 362 GNLASRVAAMIGKYHGGVLPPAGAGGAAEATIVDGVVGAVADAEAAIDAVAPHDAVAAVW 421 Query: 419 SLVSEVDRYFDAQKPWEL-------KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 +V +++ Y Q PW + + +R +T+L E +R LA+LL +PK Sbjct: 422 RVVDDLNGYVTDQAPWTVAKAAADGDEAAAERLATILVTLAEGLRALAVLLHPVMPKATA 481 Query: 472 KIFDILFVADENRCFQSLDQR---------LKPGFMLHKTFDPIFPRF 510 ++D L D DQR L G + K+ D +FPR Sbjct: 482 VLWDSLGAGDAIGPLA--DQRVADVARWGQLPAGTRVVKS-DALFPRI 526 >gi|301799802|emb|CBW32371.1| methionyl-tRNA synthetase [Streptococcus pneumoniae OXC141] Length = 665 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D + V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEKSIADFHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ IR +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLDKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + +E ++L P + PIFPR Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520 >gi|253827052|ref|ZP_04869937.1| methionyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|253510458|gb|EES89117.1| methionyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] Length = 654 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 205/484 (42%), Positives = 307/484 (63%), Gaps = 21/484 (4%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I Y N PHIGHAY IIAD LAR+HR+ +V F TGTDEHGQKI ++A+ Sbjct: 8 KFYITTPIYYVNDVPHIGHAYTTIIADTLARYHRIQNEEVWFLTGTDEHGQKIQQSAEKN 67 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 K +VD+ S F+++ D ISYD FIRTT+ H ++ R ++ K+ KGDIYKG Y Sbjct: 68 NKNPKEYVDEISAKFKNLWDSFGISYDAFIRTTDSYHKESVRNVFSKMFKKGDIYKGEYE 127 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYY 180 G Y + E+++ A Q N ++ P ++EE YFF+LSAY+D+LL + Sbjct: 128 GNYCISCESFF--------AKSQLINHKNCPDCGKETNLLKEESYFFKLSAYEDRLLQWI 179 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-----DDPQYIMYVWIDAL 235 ES+P+ ILP RRNEVI+F+K GL+DLS++R +FDWGIK+P +D +++MYVW+DAL Sbjct: 180 ESNPDCILPRMRRNEVINFIKEGLEDLSITRTSFDWGIKLPSEIESNDSKFVMYVWLDAL 239 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYL+ GY +N +K +FWPA+ H++GKDILRFHA+YWPAFL+S LPLPK + +HG+ Sbjct: 240 VNYLSALGY-ENSKENKMEFWPANYHLVGKDILRFHAVYWPAFLMSLELPLPKHIAAHGW 298 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +G K+SKS+GNV++P EV++ G+D RYF++RE+ G+DG + + L +R NADL Sbjct: 299 WTKEGAKMSKSIGNVVNPKEVVDLYGIDCFRYFVLREVPFGQDGDFSQKALIERFNADLG 358 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R + M K ++ + ++ +S E+ + +L ++ M IHR L Sbjct: 359 NDLGNLLNRLLGMGAKYFNNSLQVDLKSYKQSFEAESTTIKTILGSLKNFMNEVQIHRYL 418 Query: 415 AQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ + S + ++PW+L K+ + +L ++ + A+ L +P A KI Sbjct: 419 EELWKIFSLGNGIIAKKEPWKLIKEQKEQEVAELLVFIANLLIKGALCLYPCMPDSAKKI 478 Query: 474 FDIL 477 + Sbjct: 479 LSVF 482 >gi|157149888|ref|YP_001450809.1| methionyl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] gi|157074682|gb|ABV09365.1| methionine-tRNA ligase [Streptococcus gordonii str. Challis substr. CH1] Length = 666 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 198/521 (38%), Positives = 318/521 (61%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG++ + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 61 KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ +G+ + V+W+ EE YF RLS YQD Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + + KFW + ++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNGTVFQMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG +PT T+ D ++ V ++ + + ++M Sbjct: 361 ELANDLGNLLNRTVSMINKYFDGQVPTYEENVTDFDGALAQVAAKSIADYYKHMDAVDYP 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K ++ ++V+ +R +A +++ F+ + Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDEALRNQLASVMSHLAASLRVVAHMIEPFMMET 480 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L + +L G + + PIFPR Sbjct: 481 SKAVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 521 >gi|15458285|gb|AAK99500.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae R6] Length = 679 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 15 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 74 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 194 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 254 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 313 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 373 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D + V + + + +M+ Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 433 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ IR +A L++ F+ + Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 493 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + +E ++L P + PIFPR Sbjct: 494 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 534 >gi|327474600|gb|EGF20005.1| methionine--tRNA ligase [Streptococcus sanguinis SK408] Length = 666 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 200/522 (38%), Positives = 319/522 (61%), Gaps = 13/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI Sbjct: 1 MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQA 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ +G++ + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 61 KAEESGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ +G+ + V+W+ EE YF RLS YQD Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINF 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG +P T+ D + V S + + ++M Sbjct: 361 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGPLAQVASESIADYYKHMDAVDYP 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPK 468 RAL V +L+S ++Y D PW L K + A+ + ++T +R +A +++ F+ + Sbjct: 421 RALEVVWTLISRTNKYIDETAPWVLAKDEAKVKELAAVMSHLTAS-LRVVAHMIEPFMME 479 Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L + + +L G ++ + PIFPR Sbjct: 480 TSKAVLSQLGLPQADSLENLAIDQLPAGLIVVEKGTPIFPRL 521 >gi|239930094|ref|ZP_04687047.1| methionyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] gi|291438432|ref|ZP_06577822.1| methionyl tRNA synthetase [Streptomyces ghanaensis ATCC 14672] gi|291341327|gb|EFE68283.1| methionyl tRNA synthetase [Streptomyces ghanaensis ATCC 14672] Length = 538 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 199/481 (41%), Positives = 301/481 (62%), Gaps = 13/481 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y+ST I Y N PH+GHAY + DVL R+HR G V F TGTDEHGQKI + A+ GV Sbjct: 15 YVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWFLTGTDEHGQKIMRTAEANGV 74 Query: 68 TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + + + D+ + ++ + L+I+ DDFIRTT+KRH D + + + DKG+IYKG Y G Sbjct: 75 SPQEWADKLVTESWEPLWAHLEIANDDFIRTTQKRHTDRVQEFVQDLYDKGEIYKGGYEG 134 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y + E Y E+ G +G+Y + PV+ + EE YFF+LS Y DKLL++YE Sbjct: 135 PYCVGCEEYKLPGELLDG-EGEYAGQKLCPIHKKPVEILSEENYFFKLSEYGDKLLAHYE 193 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 ++P FI P RNEV++FV+ GL+DLS+SR TFDWG+ +P D ++++YVW+DAL NY T Sbjct: 194 ANPGFIQPESARNEVVNFVRQGLQDLSISRSTFDWGVPVPWDDKHVIYVWVDALLNYATA 253 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY +NP+ + F PAD+H++GKDILRFHA+ WPA L++ LPLP KV ++G+++ GE Sbjct: 254 VGYNENPEKFEETF-PADVHLVGKDILRFHAVIWPAMLMAQGLPLPGKVAANGWLMVGGE 312 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS I P ++ GVDA R++ +R IA G+DG + + R ++LAN GNL Sbjct: 313 KMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAIAFGQDGSFSWEDFSARYTSELANDYGNL 372 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420 SR +M+ K + G +P A ++++++ ++ + E + ++L + V Sbjct: 373 ASRVAAMVGKYFGGELPEATASGDAEKAVHDGLAKAVAEADRKIGDELDFQGGILAVFDF 432 Query: 421 VSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 V +V+ Y Q+PW++ K D R +T+LY E +R +A+LL +P+ + K++D Sbjct: 433 VKQVNGYITEQEPWKVAKDTSDEGKARLATILYTAAESLRAVAVLLNPVMPETSQKLWDS 492 Query: 477 L 477 L Sbjct: 493 L 493 >gi|225856462|ref|YP_002737973.1| methionyl-tRNA synthetase [Streptococcus pneumoniae P1031] gi|225725786|gb|ACO21638.1| methionyl-tRNA synthetase [Streptococcus pneumoniae P1031] Length = 665 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D + V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ IR +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + +E ++L P + PIFPR Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520 >gi|325478237|gb|EGC81356.1| methionine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13] Length = 647 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 202/492 (41%), Positives = 312/492 (63%), Gaps = 12/492 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YPN+ HIG+ Y +IADVL R+ L G D TTGTDEHGQKI K Sbjct: 1 MTEKKPYYITTPIYYPNSNLHIGNTYTSVIADVLKRYKNLLGYDTYLTTGTDEHGQKIMK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 +A+ AGV + FVD+ + D+ + L+I YD FIR+TE +H ++ K+ ++GDIY Sbjct: 61 SAEAAGVDPQSFVDKIASETIDLWEKLEIDYDTFIRSTESQHEKDVEEIFTKLYEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G+Y E +++ ++ DG+ + + V++ EEE YFFRLS Y D+L + Sbjct: 121 KGEYKGYYCTPCETFWSKSQL---EDGKCPDCGRD-VEYQEEETYFFRLSKYTDRLKELF 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 + HP+F+ P R+ E+++ F+ GL DLS++R TFDWG+ +P D ++++YVWIDAL+ YL Sbjct: 177 KDHPDFLEPAFRQKEMLNNFIDKGLSDLSVTRNTFDWGVDVPFDNEHVVYVWIDALSCYL 236 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 + GY DN + + K+WPA +H+IGKDI+RFH I WPA L++ +LPLP+KVF+HG+IL Sbjct: 237 SAIGYGDNKEKFE-KYWPAGVHLIGKDIVRFHTIIWPALLMALDLPLPEKVFAHGWILFD 295 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 +K+SKS GN++ P +++ GVDAL++F++RE G DG + +R N+DL N +G Sbjct: 296 NDKMSKSKGNIMYPEPLVDLYGVDALKFFMLREFNFGSDGNFSARKFMERYNSDLVNDLG 355 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 NLVSR+ SMI K Y+G + G+ ++ D+ ++++ + M ++AL + Sbjct: 356 NLVSRTTSMIDK-YNGGVVRKGSVADTYDDELIALAEETYTNFNKLMDEFNFNQALEAIW 414 Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 +L+ ++Y D +PW L + N DR VLY E IR +A L++ F+ I + Sbjct: 415 TLIRRANKYVDETEPWILGRDDKNSDRLDRVLYNLAETIRIVAQLIEPFMKNTTKIILEK 474 Query: 477 LFVADENRCFQS 488 + +N+ F+S Sbjct: 475 --IGTDNKGFES 484 >gi|149010582|ref|ZP_01831953.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] gi|168490882|ref|ZP_02715025.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] gi|168492944|ref|ZP_02717087.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] gi|221231586|ref|YP_002510738.1| methionyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] gi|225854300|ref|YP_002735812.1| methionyl-tRNA synthetase [Streptococcus pneumoniae JJA] gi|147765063|gb|EDK71992.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] gi|183574634|gb|EDT95162.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] gi|183577043|gb|EDT97571.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] gi|220674046|emb|CAR68559.1| methionyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] gi|225722945|gb|ACO18798.1| methionyl-tRNA synthetase [Streptococcus pneumoniae JJA] Length = 665 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D + V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ IR +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + +E ++L P + PIFPR Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520 >gi|149003418|ref|ZP_01828307.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] gi|237649434|ref|ZP_04523686.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974] gi|237821933|ref|ZP_04597778.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2] gi|147758601|gb|EDK65599.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] Length = 665 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKAHPEFITPEGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D + V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ IR +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + +E ++L P + PIFPR Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520 >gi|15900681|ref|NP_345285.1| methionyl-tRNA synthetase [Streptococcus pneumoniae TIGR4] gi|116516229|ref|YP_816183.1| methionyl-tRNA synthetase [Streptococcus pneumoniae D39] gi|148989872|ref|ZP_01821166.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] gi|161410751|ref|NP_358290.2| methionyl-tRNA synthetase [Streptococcus pneumoniae R6] gi|168484447|ref|ZP_02709399.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|194397413|ref|YP_002037433.1| methionyl-tRNA synthetase [Streptococcus pneumoniae G54] gi|54039688|sp|P67581|SYM_STRR6 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|54042048|sp|P67580|SYM_STRPN RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|14972263|gb|AAK74925.1| methionyl-tRNA synthetase [Streptococcus pneumoniae TIGR4] gi|116076805|gb|ABJ54525.1| methionyl-tRNA synthetase [Streptococcus pneumoniae D39] gi|147924814|gb|EDK75898.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] gi|172042338|gb|EDT50384.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|194357080|gb|ACF55528.1| methionyl-tRNA synthetase [Streptococcus pneumoniae G54] gi|332076067|gb|EGI86533.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA41301] Length = 665 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D + V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ IR +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + +E ++L P + PIFPR Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520 >gi|306829685|ref|ZP_07462875.1| methionine--tRNA ligase [Streptococcus mitis ATCC 6249] gi|304428771|gb|EFM31861.1| methionine--tRNA ligase [Streptococcus mitis ATCC 6249] Length = 679 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 205/522 (39%), Positives = 318/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 15 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 74 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 194 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 254 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 313 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 373 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP T+ D + +V + + +M+ Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTDFDNELATVAELSIADYHTHMEAVDYP 433 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ +R +A +++ F+ + Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHMIEPFMMET 493 Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 + + L +A E ++L+ L G + PIFPR Sbjct: 494 SRAVLSQLGLA-EVSSLENLNLADLPSGVNVVAKGTPIFPRL 534 >gi|24380018|ref|NP_721973.1| methionyl-tRNA synthetase [Streptococcus mutans UA159] gi|24378007|gb|AAN59279.1|AE014994_9 putative methionyl-tRNA synthetase [Streptococcus mutans UA159] Length = 669 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 202/521 (38%), Positives = 315/521 (60%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ R+ DV + TG DEHGQKI + Sbjct: 1 MTEKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNHDVFYLTGLDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 ++ AG+T + +VD + +++ +LDISYD FIRTT+ H +++K+ +GDIY Sbjct: 61 KSEEAGITPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFEKLLAQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + +E+++ DG+ + V+W+ EE YF RLS Y D Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEIFRDEDGKVIGGIAPSGHEVEWVSEESYFLRLSNYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++ +HP+FI P R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID Sbjct: 181 RLVDFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + + KFW + H++GKDILRFH+IYWP L+ +L +P+++ + Sbjct: 241 ALLNYATALGYGQDAHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLKMPERLIA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+V+MI K + G IP T+ D + +V + L + + M Sbjct: 361 ELANDLGNLLNRTVAMINKYFGGEIPAYVENVTDFDADLAAVVADNLAQYHKQMNAVDYP 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +++S ++Y D PW L K R + V+ +R +A L+Q F+ Sbjct: 421 RALETVWNIISRTNKYIDETTPWVLAKDKAKRDDLAAVMAHLAASLRVVAHLIQPFMMTT 480 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 +N I + L +A + L G + PIFPR Sbjct: 481 SNAIMEQLGLAGQFDLEGLELAGLPTGVKVIAKGTPIFPRL 521 >gi|298503207|ref|YP_003725147.1| methionine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A] gi|298238802|gb|ADI69933.1| methionine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A] Length = 679 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 15 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 74 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 194 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 254 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 313 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 373 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D + V + + + +M+ Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 433 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ IR +A L++ F+ + Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLDKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 493 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + +E ++L P + PIFPR Sbjct: 494 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 534 >gi|225858596|ref|YP_002740106.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 70585] gi|225720402|gb|ACO16256.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 70585] gi|332077203|gb|EGI87665.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA17545] Length = 665 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D + V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ IR +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + +E ++L P + PIFPR Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520 >gi|224417704|ref|ZP_03655710.1| methionyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] Length = 607 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 205/484 (42%), Positives = 307/484 (63%), Gaps = 21/484 (4%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I Y N PHIGHAY IIAD LAR+HR+ +V F TGTDEHGQKI ++A+ Sbjct: 4 KFYITTPIYYVNDVPHIGHAYTTIIADTLARYHRIQNEEVWFLTGTDEHGQKIQQSAEKN 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 K +VD+ S F+++ D ISYD FIRTT+ H ++ R ++ K+ KGDIYKG Y Sbjct: 64 NKNPKEYVDEISAKFKNLWDSFGISYDAFIRTTDSYHKESVRNVFSKMFKKGDIYKGEYE 123 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYY 180 G Y + E+++ A Q N ++ P ++EE YFF+LSAY+D+LL + Sbjct: 124 GNYCISCESFF--------AKSQLINHKNCPDCGKETNLLKEESYFFKLSAYEDRLLQWI 175 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-----DDPQYIMYVWIDAL 235 ES+P+ ILP RRNEVI+F+K GL+DLS++R +FDWGIK+P +D +++MYVW+DAL Sbjct: 176 ESNPDCILPRMRRNEVINFIKEGLEDLSITRTSFDWGIKLPSEIESNDSKFVMYVWLDAL 235 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYL+ GY +N +K +FWPA+ H++GKDILRFHA+YWPAFL+S LPLPK + +HG+ Sbjct: 236 VNYLSALGY-ENSKENKMEFWPANYHLVGKDILRFHAVYWPAFLMSLELPLPKHIAAHGW 294 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +G K+SKS+GNV++P EV++ G+D RYF++RE+ G+DG + + L +R NADL Sbjct: 295 WTKEGAKMSKSIGNVVNPKEVVDLYGIDCFRYFVLREVPFGQDGDFSQKALIERFNADLG 354 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R + M K ++ + ++ +S E+ + +L ++ M IHR L Sbjct: 355 NDLGNLLNRLLGMGAKYFNNSLQVDLKSYKQSFEAESTTIKTILGSLKNFMNEVQIHRYL 414 Query: 415 AQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ + S + ++PW+L K+ + +L ++ + A+ L +P A KI Sbjct: 415 EELWKIFSLGNGIIAKKEPWKLIKEQKEQEVAELLVFIANLLIKGALCLYPCMPDSAKKI 474 Query: 474 FDIL 477 + Sbjct: 475 LSVF 478 >gi|172036861|ref|YP_001803362.1| methionyl-tRNA synthetase [Cyanothece sp. ATCC 51142] gi|171698315|gb|ACB51296.1| methionyl-tRNA synthetase [Cyanothece sp. ATCC 51142] Length = 535 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 202/489 (41%), Positives = 291/489 (59%), Gaps = 14/489 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K ++T + Y N PHIG AY IIADV+AR+ RL G DVLF TGTDEHGQKI + A+ Sbjct: 9 KKFALTTPLYYVNGVPHIGSAYTTIIADVIARYKRLIGEDVLFITGTDEHGQKIQRTAEE 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + DQ +F + LDI YD F RTT RH + ++++ D GDIY Sbjct: 69 KGLLPQDHCDQIVASFEALWQKLDIQYDRFSRTTAPRHQAIVKEFFERVWDNGDIYLAQQ 128 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY ++ E + E+ + DG + +W +EE YFF+LS YQ KL Y+++P Sbjct: 129 QGWYCVQCEEFKEKRELLE--DGCCPLHPNKKAEWRDEENYFFKLSKYQSKLEELYKNNP 186 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RRNE+++F+ GL+D S+SR WG IP DP + +YVW DAL Y+T Sbjct: 187 QFIEPESRRNEILNFINQGLQDFSISRVNLAWGFPIPTDPDHTIYVWFDALLGYVTA--- 243 Query: 245 LDNPD------GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 L +P+ + + +WP +LH+IGKDILRFHAIYWPA L+SA LPLP+K+F HGF+ Sbjct: 244 LLDPEEEPTLNNALSDWWPINLHLIGKDILRFHAIYWPAMLMSAKLPLPQKIFGHGFLTK 303 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 G+K+ KSLGN +DP E++++ G DA+RY+ ++EI CGKDG +++ +NADLAN + Sbjct: 304 DGQKMGKSLGNTLDPFELVDKYGADAVRYYFLKEIECGKDGDFNETRFVNILNADLANDL 363 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417 GNL++R++ M K G +P A E L L E N L + ++ Sbjct: 364 GNLLNRTLGMTQKYCQGSLPKMTATELPQEHSLKTIGLTLGEKVINAYETLKFNEGCEEI 423 Query: 418 ISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 ++L+ +++ D Q PW L K+ +LY +E +R A LL +P L++KI+ Sbjct: 424 LTLIQAGNKFIDEQAPWRLFKEGKQAEVEKILYGVLESVRLAAYLLAPIIPNLSSKIYQQ 483 Query: 477 L-FVADENR 484 L F D N+ Sbjct: 484 LGFSVDFNQ 492 >gi|301793944|emb|CBW36340.1| methionyl-tRNA synthetase [Streptococcus pneumoniae INV104] Length = 665 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D + V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ IR +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + +E ++L P + PIFPR Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520 >gi|307127662|ref|YP_003879693.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 670-6B] gi|306484724|gb|ADM91593.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 670-6B] Length = 665 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D + V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ IR +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + +E ++L P + PIFPR Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520 >gi|148997133|ref|ZP_01824787.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|149007671|ref|ZP_01831288.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] gi|168575450|ref|ZP_02721386.1| methionyl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|307067392|ref|YP_003876358.1| methionyl-tRNA synthetase [Streptococcus pneumoniae AP200] gi|147756833|gb|EDK63873.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|147760826|gb|EDK67797.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] gi|183578466|gb|EDT98994.1| methionyl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|306408929|gb|ADM84356.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae AP200] Length = 665 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D + V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ IR +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + +E ++L P + PIFPR Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520 >gi|322376351|ref|ZP_08050844.1| methionine--tRNA ligase [Streptococcus sp. M334] gi|321282158|gb|EFX59165.1| methionine--tRNA ligase [Streptococcus sp. M334] Length = 665 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 202/521 (38%), Positives = 316/521 (60%), Gaps = 12/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQSYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++++HP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVDFFKAHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG +P TE D ++ +V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQVPAYVEGVTEFDHALANVAEQSIADYHTHMEAIDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ +R +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L +A+ + G + PIFPR Sbjct: 480 SRAVLTQLGLAEVSSLENLSLADFPAGVTVVAKGTPIFPRL 520 >gi|225861309|ref|YP_002742818.1| methionyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|298229840|ref|ZP_06963521.1| methionyl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254148|ref|ZP_06977734.1| methionyl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19A] gi|225726725|gb|ACO22576.1| methionyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|327390144|gb|EGE88487.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA04375] Length = 665 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D + V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ IR +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLDKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + +E ++L P + PIFPR Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520 >gi|315221903|ref|ZP_07863814.1| methionyl-tRNA synthetase [Streptococcus anginosus F0211] gi|315188869|gb|EFU22573.1| methionyl-tRNA synthetase [Streptococcus anginosus F0211] Length = 665 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 203/520 (39%), Positives = 314/520 (60%), Gaps = 14/520 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + A+ Sbjct: 3 EKNFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQKAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T + +VD + +++ ++LDISYD FIRTT+ H +++++ + DIY G Sbjct: 63 EAGITPQAYVDSMAVGVKELWELLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGE 122 Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + +EV++ G+ + V+W+ EE YF RL Y D+L+ Sbjct: 123 YSGWYSVSDEEFFTESQLEEVFRDESGKVIGGIAPSGHEVEWVSEESYFLRLGKYADRLV 182 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++ +HP+FI P R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWIDAL Sbjct: 183 EFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWIDALL 242 Query: 237 NYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 NY T GY + D + KFW H++GKDILRFH+IYWP L+ ++ LP ++ +HG Sbjct: 243 NYATALGYGQDADANFEKFWNNGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPDRLIAHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +L Sbjct: 303 WFVMKDGKMSKSKGNVVYPEILVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYEL 362 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG +P TE D + +V + + + M RA Sbjct: 363 ANDLGNLLNRTVAMINKYFDGQVPIYKENVTEFDADLAAVVAENIAIYHKQMDAVDYPRA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 L V +++S ++Y D PW L K D + V+ V +R +A L+Q F+ +N Sbjct: 423 LEAVWNIISRTNKYIDETAPWVLAKDEAKRDELAAVMAHLVASLRVVAHLIQPFMMTTSN 482 Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 I + L + + ++LD L G + PIFPR Sbjct: 483 AIMEQLGLG-TDFDLENLDLAELPTGLTVVAKGTPIFPRL 521 >gi|169832629|ref|YP_001694248.1| methionyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] gi|168995131|gb|ACA35743.1| methionyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] Length = 665 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPIGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D + V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ IR +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + +E ++L P + PIFPR Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520 >gi|167747813|ref|ZP_02419940.1| hypothetical protein ANACAC_02535 [Anaerostipes caccae DSM 14662] gi|167653175|gb|EDR97304.1| hypothetical protein ANACAC_02535 [Anaerostipes caccae DSM 14662] Length = 648 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 204/493 (41%), Positives = 309/493 (62%), Gaps = 15/493 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E YI+TAI Y + +PHIG+ YE+I+AD +AR+ R++G DV F TGTDEHGQK+ A Sbjct: 3 KEPYYITTAITYTSGKPHIGNTYEIILADSIARYKRMEGYDVFFQTGTDEHGQKVELKAA 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT K FVD + + + D+++ SYD FIRTT+ H + ++K++ ++GDIYKG Sbjct: 63 EKGVTPKEFVDDVAGEIKRIWDLMNTSYDKFIRTTDADHEAQVQKIFKRLYEQGDIYKGH 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y E+++ + ++ DG+ + VQ +EE YF +LS Y D+L+ Y +H Sbjct: 123 YEGLYCTPCESFFTESQL---VDGKCPDCGRE-VQPAKEEAYFLKLSKYADRLIDYINAH 178 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEFI P R+NE+++ F+ GL+DL +SR +F WGI + D +++YVW+DALTNY+T Sbjct: 179 PEFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDEGHVVYVWLDALTNYITGI 238 Query: 243 GYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 GY + DG+ K WPADLH+IGKDI+RFH IYWP L++ +LPLPK+VF H ++L Sbjct: 239 GY--DCDGNSTDQFKKLWPADLHLIGKDIIRFHTIYWPIILMALDLPLPKQVFGHPWLLQ 296 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K+SKS GNV+ ++ E VDA+RYF++ E+ DG + + +R+N+DLAN + Sbjct: 297 GDGKMSKSKGNVLYADDLAEMFSVDAVRYFVLHEMPFEHDGVISWELMVERMNSDLANTL 356 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNLV+R++SM K +DG++ G E D+ + +V + ++++ M + A+ ++ Sbjct: 357 GNLVNRTISMSNKYFDGVVEDKGVEDEFDDQLKAVVTGARDKVQKKMDVLKVADAMTEIF 416 Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 ++ ++Y D PW L K DR +TVLY VE I A LL+ ++P+ KI Sbjct: 417 NVFKRCNKYIDETMPWVLAKDEAKKDRLATVLYNLVEGILTGAALLEPYMPETVEKILKQ 476 Query: 477 LFVADENRCFQSL 489 L E R F+ L Sbjct: 477 LNA--EPRRFEDL 487 >gi|325833648|ref|ZP_08166097.1| methionine--tRNA ligase [Eggerthella sp. HGA1] gi|325485572|gb|EGC88041.1| methionine--tRNA ligase [Eggerthella sp. HGA1] Length = 529 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 201/480 (41%), Positives = 283/480 (58%), Gaps = 7/480 (1%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 +T I Y NA PH+G AY I AD +AR+ R++G DV F TG DEHGQK+A A + G+T Sbjct: 8 FTTPIYYVNAAPHLGTAYTTIAADTVARYQRMNGYDVAFVTGMDEHGQKVADTAADKGMT 67 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + + D FRD D+L I+Y DF+RTTE RH T + W+ + DKG YKG Y GWY Sbjct: 68 PQDWCDSMEPAFRDAWDMLGITYTDFVRTTEPRHAVTVQKFWQDLYDKGWCYKGSYEGWY 127 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWM-EEEGYFFRLSAYQDKLLSYYESHPEF 186 + +E YY + ++ K +G+ PVQ EE +FF+LS + DKLL++YE +P+F Sbjct: 128 CVHEETYYAESDLEKNDEGELVCPDCKRPVQKAGGEENWFFKLSEFGDKLLAFYEENPDF 187 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P R+NE++SFVKSGLKDLS+SR TFDWG+ +P D ++ YVW DAL YLT GY D Sbjct: 188 IRPETRKNEIVSFVKSGLKDLSISRSTFDWGVPLPFDEGHVAYVWADALLAYLTGIGYGD 247 Query: 247 NPD--GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + G WP H +GKDI RFH + WPA L++A LP+ VF HGF+L KGEK+S Sbjct: 248 EGERAGEFDARWPMQYHFVGKDITRFHCVIWPAMLMAAGLPITHTVFGHGFLLTKGEKMS 307 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GN + P ++ + GVDA RY+ + ++ G DG + + + NADLAN GNL SR Sbjct: 308 KSKGNALKPADLCKVFGVDAYRYYFMSDVQFGADGSISMERMVQVYNADLANTWGNLCSR 367 Query: 365 SVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 +M K +DG +P P ++ + ++ + E + A A V L Sbjct: 368 VFNMTKKYFDGQVPEVPAEVLANENPLRAITEELYAEYDAALGAVDFTAAAAAVQKLAGR 427 Query: 424 VDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 V+ Y + PW L K+ + V+Y +E IR +A+ + F+P + ++F L + D Sbjct: 428 VNLYVEESAPWNLAKSEETAGELAEVIYNALEAIRIIALYMAPFMPNTSAEVFRRLSLGD 487 >gi|227501185|ref|ZP_03931234.1| methionine--tRNA ligase [Anaerococcus tetradius ATCC 35098] gi|227216586|gb|EEI81990.1| methionine--tRNA ligase [Anaerococcus tetradius ATCC 35098] Length = 645 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 203/493 (41%), Positives = 316/493 (64%), Gaps = 14/493 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YPN+ HIG+ Y +IADVL R+ L G D TTGTDEHGQKI K Sbjct: 1 MTEKKPYYITTPIYYPNSNLHIGNTYTSVIADVLKRYKNLLGYDTFLTTGTDEHGQKIMK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 +AQ+AGV + FVD+ + ++ L+I YD FIR+TEK+H + + ++ K+ ++GDIY Sbjct: 61 SAQDAGVNPQAFVDKIASETIELWKKLEIDYDRFIRSTEKQHEEDVKNIFTKLYEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G+Y E ++ + ++ DG+ + + V + EEE YFFRLS Y D+L + Sbjct: 121 KGEYKGYYCTPCETFWTEAQL---EDGKCPDCGRD-VDYQEEETYFFRLSKYTDRLKELF 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 + HPEF+ P R+ E+++ F+ GL DLS++R +FDWG+ +P D ++++YVWIDAL+ YL Sbjct: 177 KDHPEFLEPAFRQKEMLNNFIDKGLSDLSVTRNSFDWGVDVPFDNEHVVYVWIDALSCYL 236 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 + G+ D+ + + K+WPA +H+IGKDI+RFH I WPA L++ +LPLP+KVF+HG+IL Sbjct: 237 SAIGFGDDKEKFE-KYWPAGVHLIGKDIVRFHTIIWPALLMALDLPLPEKVFAHGWILFD 295 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 +K+SKS GN++ P +++ GVDAL++F++RE G DG + +R N+DL N +G Sbjct: 296 NDKMSKSKGNIMYPEPLVDLYGVDALKFFMLREFNFGSDGNFSAKKFMERYNSDLVNDLG 355 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 NLVSR+ SMI K Y+G + G ++S D+ ++++ S + + M + A+ + Sbjct: 356 NLVSRTTSMIDK-YNGGVVRKGTVSDSFDDELIALSSETYSKFNKLMNEFNFNAAIEAIW 414 Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 L+ ++Y D +PW L + N +R VLY E IR +A L++ P + N +I Sbjct: 415 VLIRRANKYVDETEPWILGRDEANKERLDRVLYNLAETIRIVAQLIE---PVMKNTTREI 471 Query: 477 L-FVADENRCFQS 488 L + +N+ F+S Sbjct: 472 LEKIGTDNKGFES 484 >gi|307708494|ref|ZP_07644959.1| methionyl-tRNA synthetase [Streptococcus mitis NCTC 12261] gi|307615410|gb|EFN94618.1| methionyl-tRNA synthetase [Streptococcus mitis NCTC 12261] Length = 665 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/522 (39%), Positives = 317/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVW D Sbjct: 180 RLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWFD 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY+T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP+++ Sbjct: 240 ALLNYVTALGYDQDEHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIG 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P +IE G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLIERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D ++ V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHALAQVAEQSIADYHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ +R +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L +A E ++L+ P + PIFPR Sbjct: 480 SRAVLTQLGLA-EVASLENLNLADFPADVTVVAKGTPIFPRL 520 >gi|254390367|ref|ZP_05005584.1| methionyl tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294813846|ref|ZP_06772489.1| Putative methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|326442264|ref|ZP_08216998.1| methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|197704071|gb|EDY49883.1| methionyl tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294326445|gb|EFG08088.1| Putative methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] Length = 537 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 200/485 (41%), Positives = 303/485 (62%), Gaps = 13/485 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K+ Y++T I Y N PH+GHAY + DVL R+HR G V + TGTDEHGQKI + Sbjct: 8 KQGAAYYVTTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRT 67 Query: 62 AQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GVT + + D+ S ++ + + LDI+ DDFIRTTEKRH D + + + DKG+IY Sbjct: 68 AETHGVTPQEWCDKLVSEAWKPLWEHLDIANDDFIRTTEKRHTDRVKEFVQDLYDKGEIY 127 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDK 175 KG Y G Y + E Y ++ G +G+Y + PV+ ++EE YFF+LS Y K Sbjct: 128 KGGYEGPYCVGCEEYKLPGDLIDG-EGEYAGQKLCPIHKKPVELLKEENYFFKLSEYGPK 186 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 LL YES+P FI P RNEV++FVK GL+DLS+SR TFDWG+K+P D ++++YVWIDAL Sbjct: 187 LLELYESNPGFIQPESARNEVVNFVKQGLQDLSISRSTFDWGVKVPWDEKHVIYVWIDAL 246 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY +NP+ + F PA++H++GKDILRFHAI WPA L++ LP+P +V ++G+ Sbjct: 247 LNYATAVGYNENPEKFASTF-PANVHLVGKDILRFHAIIWPAMLMANGLPVPGRVAANGW 305 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 ++ GEK+SKS I P ++ GVDA R++ +R I+ G+DG + + R ++LA Sbjct: 306 LMVGGEKMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAISFGQDGSFSWEDFSVRYTSELA 365 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414 N GNL SR +M+ K + G +P A E++ ++ ++ + E + +++ + Sbjct: 366 NDYGNLASRVAAMVGKYFGGSLPEATAAGEAERAVQEGLAKAVAEADRKIGDEIDFQGGI 425 Query: 415 AQVISLVSEVDRYFDAQKPWELKK-TNPD---RASTVLYVTVEVIRQLAILLQAFVPKLA 470 V V +V+ Y Q+PW++ K T+P+ R +T+LY E +R +A+LL +P+ + Sbjct: 426 LAVFDFVKQVNGYLTEQEPWKVAKDTSPEGQARLATILYTAAEALRGVAVLLNPVMPRTS 485 Query: 471 NKIFD 475 ++D Sbjct: 486 QALWD 490 >gi|262283105|ref|ZP_06060872.1| methionyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] gi|262261357|gb|EEY80056.1| methionyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] Length = 666 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 198/521 (38%), Positives = 316/521 (60%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG++ + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 61 KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ +G+ + V+W+ EE YF RLS YQD Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P +R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVW D Sbjct: 181 RLVEFFKSHPDFITPDDRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWFD 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY+T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP+++ Sbjct: 241 ALLNYVTALGYGQDEHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIG 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P +IE G+D LRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLIERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG +P T+ D ++ V + + + + M Sbjct: 361 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGALAQVAAESIADYYKYMDAVDYP 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K ++ ++V+ +R +A ++ F+ + Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDEALRNQLASVMSHLAASLRVVAHMIDPFMMET 480 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L + +L G + + PIFPR Sbjct: 481 SKAVLSQLDLPQATSLENLAIDQLPAGLTVVEKGTPIFPRL 521 >gi|322815163|gb|EFZ23882.1| methionyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 765 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/495 (41%), Positives = 288/495 (58%), Gaps = 18/495 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 +++T I Y NA PHIGH Y +IADV+ R+H + G V +GTDEHGQK+A+AA+ G Sbjct: 234 FFVTTPIYYVNAAPHIGHVYSTLIADVIGRYHTIKGERVFAMSGTDEHGQKVAEAARQKG 293 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + F Q SR F D + + D FIRTT + H LW K+ KGDIY G Y G Sbjct: 294 MNPYDFTFQVSREFIDCFEQMGYHMDYFIRTTNESHKKVVHELWSKLEAKGDIYLGRYEG 353 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 WYS+ DE++ V G D + + V W+ E+ Y FRLSA++++LL +Y Sbjct: 354 WYSVSDESFLTAQNVTDGVDKDGKPCKVSLESGHVVTWLAEDNYMFRLSAFRERLLEWYN 413 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRK---TFDWGIKIPDDPQYIMYVWIDALTNY 238 ++P I+P RR EVI V+ GL DLS+SR DW I +P +P + +YVW+DAL+NY Sbjct: 414 NNPGCIVPEFRRREVIRTVEKGLNDLSVSRTREAVQDWAIPVPGNPNHCIYVWLDALSNY 473 Query: 239 LTTTGYLDNPDGSKAKF---------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289 T + G + + +PAD+HVIGKDIL+FHAIYWPAFL+SA LPLPK Sbjct: 474 YTGSRLRLGNSGEELELVEDHRVLERFPADIHVIGKDILKFHAIYWPAFLISAGLPLPKT 533 Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 + +HG+ +KISKSLGNV DP+E E G DAL+YFL+RE DG Y + R Sbjct: 534 IVAHGWWTKDRKKISKSLGNVFDPVEKAREFGFDALKYFLLRETGFSDDGDYSDRNMIAR 593 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 +N +LA+ +GNLV R S + + PTP A+ DE+++ + + + Sbjct: 594 LNGELADTLGNLVMRCTSAKINVHREW-PTPDAYNAKDEALIQLIKELPGVVDHFFLIPD 652 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 + +ALA V ++ ++ Y PW L KT+PDR TVLY+T+E R ++L + + Sbjct: 653 VQKALAAVFDVLRAINSYVTENAPWRLVKTDPDRLRTVLYITMEGTRLATLMLSPVLSQK 712 Query: 470 ANKIFDILFVADENR 484 A IFD+L V + NR Sbjct: 713 APVIFDMLGVPEANR 727 >gi|322517312|ref|ZP_08070187.1| methionine--tRNA ligase [Streptococcus vestibularis ATCC 49124] gi|322124009|gb|EFX95562.1| methionine--tRNA ligase [Streptococcus vestibularis ATCC 49124] Length = 667 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 208/523 (39%), Positives = 313/523 (59%), Gaps = 23/523 (4%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YP+ + HIG AY I DVLAR+ R+ DV + TG DEHGQKI + A+ AG Sbjct: 5 FYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEEAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + +VD + +D+ +LDISYD FIRTT+ H +++++ ++GDIY G YSG Sbjct: 65 ITPQEYVDGMAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEQGDIYLGEYSG 124 Query: 127 WYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 WYS+ DE ++ + EVY+ G + V+ + EE YFF+LS Y D L ++ Sbjct: 125 WYSVSDEEFFTESQLAEVYRDEQGNVIGGVAPSGHEVELVSEESYFFKLSNYADHLTDFF 184 Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 + HPEFI P R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL NY+ Sbjct: 185 KEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDALINYI 244 Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 T GY + G+ FW D +H+IGKDILRFH+IYWP L++ +LPLP ++ +HG Sbjct: 245 TALGYGQDEHGNFDLFWQNDENHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVAHG 304 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + + K K+SKS GNVI P ++E G+D LRY+L+R + G DG + + R+N +L Sbjct: 305 WFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINYEL 364 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K + G +P T+ D + V + ++E + M RA Sbjct: 365 ANDLGNLLNRTVAMINKYFGGQVPVYVENVTDFDADLAKVVAENIEEFHKQMNAVDFPRA 424 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 L V +++S ++Y D PW L K + D+ + V+ +R +A L+Q F+ +N Sbjct: 425 LDAVWNIISRTNKYIDETAPWVLAKEDGDKEQLAAVMAHLAASLRVVAHLVQPFMMTTSN 484 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510 I + L + L+ GF + T PIFPR Sbjct: 485 AIMEQLGLP----VVFDLENLELSGFPENVTVVSKGTPIFPRL 523 >gi|212696056|ref|ZP_03304184.1| hypothetical protein ANHYDRO_00592 [Anaerococcus hydrogenalis DSM 7454] gi|212676965|gb|EEB36572.1| hypothetical protein ANHYDRO_00592 [Anaerococcus hydrogenalis DSM 7454] Length = 645 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 207/489 (42%), Positives = 305/489 (62%), Gaps = 11/489 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ YI+T I YPN+ HIG+ Y +IADVL R+ L G D TTGTDEHGQKI AA Sbjct: 2 DKNTYYITTPIYYPNSNLHIGNVYTSVIADVLKRYKTLQGFDSYLTTGTDEHGQKIMNAA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + G + FVD+ + +D+ LDI YD FIR+T+ +H + + +++ + DKGDIYKG Sbjct: 62 LSHGSKPQPFVDKIAAETQDLLKKLDIDYDCFIRSTDPKHEENVKNIFQYLYDKGDIYKG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G+Y E+Y+ + ++ +G A V +EE YFF+LS Y DKL ++ Sbjct: 122 EYDGYYCESCESYFTESQLDEGNCPDCGRA----VDHHKEESYFFKLSKYTDKLKELFKD 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEF+ P R+NE+++ F+ GL+DLS+SR TFDWG+ +P D ++++YVWIDAL+ YLT Sbjct: 178 HPEFLEPKFRQNEMLNNFINKGLEDLSVSRNTFDWGVDVPFDNEHVVYVWIDALSCYLTA 237 Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY D K K+WPA +H+IGKDI+RFH I WPA L++ ++PLP+KVF+HG+IL Sbjct: 238 IGY--GHDMEKFNKYWPAGVHLIGKDIVRFHTIIWPALLMALDIPLPRKVFAHGWILFDN 295 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKS GN++ P ++E G DAL+YFL+RE G DG + R N+DL N +GN Sbjct: 296 DKMSKSKGNIMYPEPLVELYGTDALKYFLLREFNFGSDGNFLSKKFMDRYNSDLVNDLGN 355 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+SR+VSMI K DG+I E DE ++++C + + + M + + AL + +L Sbjct: 356 LLSRTVSMISKYNDGIIKKGSETDEYDEDLINLCHKTYDDFTKLMDDFKFNEALECLWNL 415 Query: 421 VSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 V ++Y D +PW L + +R +TVLY E +R +A +L+ + +I L + Sbjct: 416 VRRSNKYVDQTEPWILGREEKYERLNTVLYNLAESLRIVAQMLEPVMRNTTEEILKQLGL 475 Query: 480 ADENRCFQS 488 EN+ F S Sbjct: 476 --ENKGFAS 482 >gi|146321108|ref|YP_001200819.1| methionyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|253751976|ref|YP_003025117.1| methionyl-tRNA synthetase [Streptococcus suis SC84] gi|145691914|gb|ABP92419.1| Methionyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|251816265|emb|CAZ51893.1| methionyl-tRNA synthetase [Streptococcus suis SC84] Length = 667 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/523 (39%), Positives = 318/523 (60%), Gaps = 21/523 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI + A+ Sbjct: 3 KTPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIEEKAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T + +VD + +++ ++LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 63 EAGLTPQAYVDGMAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122 Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + +EV++ +G+ + V W+ EE YF RLS YQDKL+ Sbjct: 123 YSGWYSVSDEEFFTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKLV 182 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++ +HP+FI P R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL Sbjct: 183 EFFNAHPDFIQPAGRLNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDALL 242 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ +HG+ Sbjct: 243 NYATALGYGQEETVNYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDRLVAHGW 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVDRINYELA 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K + G +PT A T+ D + +V + L + M+ RAL Sbjct: 363 NDLGNLLNRTVAMINKYFGGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPRAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILLQAFVPKLAN 471 V +++S ++Y D PW L K DR A+ + ++T +R +A L+Q F+ +N Sbjct: 423 EAVWNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAG-LRVVAHLIQPFMMTTSN 481 Query: 472 KIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I + L + EN F L G + PIFPR Sbjct: 482 AIMEQLGLGTAFDLENLDFAG----LPAGLTVVAKGTPIFPRL 520 >gi|33303697|gb|AAP22256.1| methionyl-tRNA synthetase [Bacillus cereus] Length = 400 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 184/400 (46%), Positives = 278/400 (69%), Gaps = 10/400 (2%) Query: 31 ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS 90 D +AR+ R+ G +V + TGTDEHGQKI K A+ VT + +VD +++ + +DIS Sbjct: 2 GDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNVTPQAYVDNIVAGIKELWEKMDIS 61 Query: 91 YDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND----DEVYKG-- 144 YDDFIRTTE RH D ++K++ D+GDIY Y GWYS++DE +Y + D + +G Sbjct: 62 YDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDK 121 Query: 145 -ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKS 202 G+ ++ H+ V+ + EE YFFR+ Y D+LL +YE +P FI P R+NE+I+ F+K Sbjct: 122 VVGGKSPDSGHD-VELVREESYFFRMGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKP 180 Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262 GL+DL++SR +FDWG+++P +P++++YVW+DAL+NY+T GY + KFWPAD+H+ Sbjct: 181 GLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHL 240 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 +GK+I+RFH IYWP L++ +LPLPKKVF+HG+IL K K+SKS GNV+DP+ +I+ G+ Sbjct: 241 VGKEIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGL 300 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PG 381 DALRY+L+RE+ G DG + +G +R+N DLAN +GNL++R+V+MI K ++G IP Sbjct: 301 DALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYFNGEIPAFKE 360 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 TE DE++++ L+++ E M+N AL+ + LV Sbjct: 361 NVTEFDETLVTFAKDTLKKVEEAMENMEFSVALSSIWQLV 400 >gi|293365638|ref|ZP_06612347.1| methionine-tRNA ligase [Streptococcus oralis ATCC 35037] gi|291316006|gb|EFE56450.1| methionine-tRNA ligase [Streptococcus oralis ATCC 35037] Length = 679 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 15 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ ++LDISYD FIRTT+ H +++++ + DIY Sbjct: 74 KAEEAGITPQAYVDGMAVGVKELWELLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 194 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 254 ALLNYATALGYGQEDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDMKLPDRLIA 313 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 373 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D S+ V S + + +M+ Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHSLAQVASESIADYHTHMEAVDYP 433 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K + D+ ++V+ +R +A +++ F+ Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEEHRDQLASVMSHLAASLRVVAHMIEPFMMGT 493 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L +A E ++L P + PIFPR Sbjct: 494 SRAVLAQLGLA-EVSSLENLSLADFPADVTVVAKGTPIFPRL 534 >gi|322388105|ref|ZP_08061711.1| methionine--tRNA ligase [Streptococcus infantis ATCC 700779] gi|321141126|gb|EFX36625.1| methionine--tRNA ligase [Streptococcus infantis ATCC 700779] Length = 712 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 203/521 (38%), Positives = 314/521 (60%), Gaps = 12/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 48 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 106 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +D+ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 107 KAEEAGITPQAYVDGMAVGVKDLWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 166 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 167 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 226 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 227 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 286 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 287 ALLNYATALGYGQEDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 346 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 347 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 406 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP T+ D+++ V + + + M+ Sbjct: 407 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTDFDKALADVAEQSIADYNAYMEAVDYP 466 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K + D+ ++V+ +R +A L++ F+ + Sbjct: 467 RALEAVWTLISRTNKYIDETAPWVLAKDEAHRDQLASVMSHLAASLRVVAHLIEPFMMET 526 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L +A+ + G + PIFPR Sbjct: 527 SRAVLTQLGLAEVSSLENLSLADFPAGVTVVAKGTPIFPRL 567 >gi|307703587|ref|ZP_07640529.1| methionyl-tRNA synthetase [Streptococcus oralis ATCC 35037] gi|307622994|gb|EFO01989.1| methionyl-tRNA synthetase [Streptococcus oralis ATCC 35037] Length = 665 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ ++LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWELLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYGQEDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDMKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D S+ V S + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHSLAQVASESIADYHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K + D+ ++V+ +R +A +++ F+ Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEEHRDQLASVMSHLAASLRVVAHMIEPFMMGT 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L +A E ++L P + PIFPR Sbjct: 480 SRAVLAQLGLA-EVSSLENLSLADFPADVTVVAKGTPIFPRL 520 >gi|262037573|ref|ZP_06011029.1| methionine--tRNA ligase [Leptotrichia goodfellowii F0264] gi|261748395|gb|EEY35778.1| methionine--tRNA ligase [Leptotrichia goodfellowii F0264] Length = 633 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 204/511 (39%), Positives = 317/511 (62%), Gaps = 14/511 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI++ I YPNA PH+G AY II DV++R+ R+ G DV F TG DEHGQKI +AA+ G Sbjct: 5 FYITSPIYYPNAAPHVGTAYTTIICDVVSRYKRIKGYDVSFMTGVDEHGQKIQEAAEKNG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + +VD+ S NF + + L+IS D++RTT++RH ++ R + K++++KGDIY+G Y G Sbjct: 65 FTPQQWVDKMSLNFTTLWEKLNISNTDYLRTTQERHIESVREIVKRVNEKGDIYRGEYVG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 YS+ +E + ++++ DG+Y + V+ E YFFRLS Y+D LL + E +P+F Sbjct: 125 KYSVSEETFVPENQL---VDGKYMGKEVIDVK---EVSYFFRLSKYEDALLKHIEENPDF 178 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P ++NEV++F+K GL+DLS+SR TFDWGI + + +++YVW DALT YLT G+ Sbjct: 179 IKPESKKNEVVAFIKQGLQDLSISRTTFDWGIPLELEKGHVIYVWFDALTVYLTGAGFKK 238 Query: 247 NPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + + + W HVIGKDILRFHAI WPA L+SA + LP V +HG+ +GEK+S Sbjct: 239 D-EKEFGEIWSNGKVTHVIGKDILRFHAIIWPAMLMSAGIKLPDTVAAHGWWTVEGEKMS 297 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSLGNV++P E +++ G+DA RY+L+RE G+D Y K + +R+N+DLAN +GNL++R Sbjct: 298 KSLGNVVNPEEEVKKYGLDAFRYYLMREATFGQDADYSKKAMIQRINSDLANDLGNLLNR 357 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 ++ M K ++ + + D I + + ++++ +M AL + + + Sbjct: 358 TIGMQKKYFNSEVILNKVEDKYDIEIKDLWEKTVEDLDIHMNEFQFSEALKDIWKFIGRM 417 Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++Y D +PW L K + DR STV+Y V+ + ++++L+ F+P A KI L + + Sbjct: 418 NKYIDECEPWNLAKDGSKKDRLSTVMYNLVDSLYKISMLIYPFMPDTAEKIVRQLGLNID 477 Query: 483 NRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510 + D R + D P+FPR Sbjct: 478 FNTLKLEDIRKWGSYPAGNKLDEAVPLFPRI 508 >gi|104773496|ref|YP_618476.1| methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422577|emb|CAI97180.1| Methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|325125127|gb|ADY84457.1| Methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 660 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 202/520 (38%), Positives = 308/520 (59%), Gaps = 16/520 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + IG+AY I AD + R+ + G D F TGTDEHG KI + A+ Sbjct: 5 KKTFYITTPIYYPSGRLTIGNAYTTIAADTMTRYKKARGYDTFFLTGTDEHGLKIEQKAE 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ K ++D ++ +++ LDI+YD FIRTT++ H + +++K+ GDIY G Sbjct: 65 KLGMKPKAYLDGMVKDIKELWKKLDINYDKFIRTTDEEHVKAVQKIFEKLKASGDIYLGE 124 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 Y+GWYS+ DE Y+ + EV+K G + VQ ++E YFF++S Y D+LL Sbjct: 125 YTGWYSVEDEEYFTESQLKEVFKDDQGNVVGGIAPSGHEVQLVKEPSYFFKMSKYADRLL 184 Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 YY+ HPEFI P R E+++ F+K GL+DLS++R T DWGI +P DP++++YVWIDAL Sbjct: 185 QYYKDHPEFIQPNSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDALA 244 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NY+T GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK+VF HG++ Sbjct: 245 NYITALGYGSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGWV 304 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L +K+SKS GN + P +I G+D +RY+L+R I G DG + + +R N DLAN Sbjct: 305 LIYKDKMSKSKGNAVYPESLISRYGLDPVRYYLMRAIPFGADGSFTPEDFVERTNFDLAN 364 Query: 357 GIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 +GNL++R+VSMI + G++ P + + + +V ++ + + NM AL Sbjct: 365 DLGNLLNRTVSMINQYQKGLVAPVDQEQDKYGQDLAAVAAKAISDYYGNMDKMHFSNALE 424 Query: 416 QVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 V L+S ++Y D PW L K+ + S V+ E +R +AI++ + + K+F Sbjct: 425 NVWQLISRANKYIDETTPWVLNKEGKTEELSRVMSNLAESLRLVAIMIAPVMTETPGKMF 484 Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510 L + E+ + L GF PIFPR Sbjct: 485 AQLGLDWEDESQKDLQFG---GFAWDVNVVAKPTPIFPRL 521 >gi|257792394|ref|YP_003183000.1| methionyl-tRNA synthetase [Eggerthella lenta DSM 2243] gi|257476291|gb|ACV56611.1| methionyl-tRNA synthetase [Eggerthella lenta DSM 2243] Length = 529 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 203/480 (42%), Positives = 284/480 (59%), Gaps = 7/480 (1%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 +T I Y NA PH+G AY I AD +AR+ R++G DV F TG DEHGQK+A A + G+T Sbjct: 8 FTTPIYYVNAAPHLGTAYTTIAADTVARYQRMNGYDVAFVTGMDEHGQKVADTAADKGMT 67 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + + D FRD D+L I+Y DF+RTTE RH T + W+ + DKG YKG Y GWY Sbjct: 68 PQDWCDSMEPAFRDAWDMLGITYTDFVRTTEPRHAVTVQKFWQDLYDKGWCYKGSYEGWY 127 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWM-EEEGYFFRLSAYQDKLLSYYESHPEF 186 + +E YY + ++ K +G+ PVQ EE +FF+LS + DKLL++YE +P+F Sbjct: 128 CVHEETYYAESDLEKNDEGELVCPDCKRPVQKAGGEENWFFKLSEFGDKLLAFYEENPDF 187 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P R+NE++SFVKSGLKDLS+SR TFDWG+ +P D ++ YVW DAL YLT GY D Sbjct: 188 IRPETRKNEIVSFVKSGLKDLSISRSTFDWGVPLPFDEGHVAYVWADALLAYLTGIGYGD 247 Query: 247 NPD--GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + G WP H +GKDI RFH + WPA L++A LP+ VF HGF+L KGEK+S Sbjct: 248 EGERAGEFDARWPMQYHFVGKDITRFHCVIWPAMLMAAGLPITHTVFGHGFLLTKGEKMS 307 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GN + P ++ + GVDA RY+ + ++ G DG + + + NADLAN GNL SR Sbjct: 308 KSKGNALKPADLCKVFGVDAYRYYFMSDVQFGADGSISMERMVQVYNADLANTWGNLCSR 367 Query: 365 SVSMILKDYDGMIPTPGAFTESDESIL-SVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 +M K +DG +P A + E+ L ++ + E + A A V L Sbjct: 368 VFNMTKKYFDGQVPEVSAGVLAKENPLRAISDELYAEYDAALGAVDFTAAAAAVQKLAGR 427 Query: 424 VDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 V+ Y + PW L K+ + V+Y +E IR +A+ + F+P + ++F L + D Sbjct: 428 VNLYVEESAPWNLAKSEETAGELAEVIYNALEAIRIIALYMAPFMPNTSAEVFRRLSLGD 487 >gi|284052455|ref|ZP_06382665.1| methionyl-tRNA synthetase [Arthrospira platensis str. Paraca] gi|291571486|dbj|BAI93758.1| methionyl-tRNA synthetase [Arthrospira platensis NIES-39] Length = 534 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 200/483 (41%), Positives = 286/483 (59%), Gaps = 15/483 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++T + Y N PHIG AY I AD +AR+ RL G +VL TGTDEHGQKI + A+ Sbjct: 8 KKTFSLTTPLYYVNDVPHIGSAYTTIAADAIARWKRLQGYEVLLITGTDEHGQKIQRTAE 67 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG + +V D+ +F + +L+I YD F RTT RH R ++++ + DIY Sbjct: 68 EAGCSPQVHCDRIVSSFESLWKLLEIQYDRFSRTTSPRHEAIVREFFQRVWENEDIYLSQ 127 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYES 182 GWY + E + E+ D +Y N V+W +E+ YFFRLS YQ +L + Y Sbjct: 128 QQGWYCVSCEEFKEKREL---IDEKYCPIHVNKEVEWRDEQNYFFRLSKYQKQLEALYHD 184 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 HP+FI P RRNEVISFV GL+D S+SR DWG +P DP +YVW DAL Y+T Sbjct: 185 HPDFIGPESRRNEVISFVNQGLQDFSISRVNLDWGFPVPIDPSQTLYVWFDALLGYVTA- 243 Query: 243 GYLDNPDGSK------AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 L +PD AK+WP DLH+IGKDILRFHA+YWPA L+SA+LPLP ++F HGF+ Sbjct: 244 --LVDPDSEPSLSEAIAKWWPIDLHLIGKDILRFHAVYWPAMLMSADLPLPGRIFGHGFL 301 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 G+K+ KSLGN ++P+E++ + G DA+RY+ ++EI G+DG Y++ +NADLAN Sbjct: 302 TKDGKKMGKSLGNTLNPVELVNQYGTDAVRYYFLKEIEFGQDGDYNQTRFINTLNADLAN 361 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 +GNL++R++ M K +DG +P +D + S+ S + + + + + Sbjct: 362 DLGNLLNRTMKMAAKYFDGRVPAIAVDNISADNHLKSIGSSLGNTVSQFYEKLAFSQVCE 421 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIF 474 V+ LV ++Y D Q PW L K A S V+Y +E +R A LL VP L+ ++ Sbjct: 422 AVLVLVQAGNKYVDEQAPWSLYKRGELSALSEVIYSVLESVRLAAYLLAPIVPNLSTAVY 481 Query: 475 DIL 477 L Sbjct: 482 QQL 484 >gi|253755323|ref|YP_003028463.1| methionyl-tRNA synthetase [Streptococcus suis BM407] gi|251817787|emb|CAZ55539.1| methionyl-tRNA synthetase [Streptococcus suis BM407] Length = 667 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 206/523 (39%), Positives = 319/523 (60%), Gaps = 21/523 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI + A+ Sbjct: 3 KTPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIEEKAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T + +VD + +++ ++LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 63 EAGLTPQAYVDGMAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122 Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + +EV++ +G+ + + V W+ EE YF RLS YQDKL+ Sbjct: 123 YSGWYSVSDEEFFTESQLEEVFRDENGKVTSGIAPSGHEVAWVSEESYFLRLSKYQDKLV 182 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++ +HP+FI P R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL Sbjct: 183 EFFNAHPDFIQPDGRLNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDALL 242 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ +HG+ Sbjct: 243 NYATALGYGQEETVNYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDRLVAHGW 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K + G +PT A T+ D + +V + L + M+ RAL Sbjct: 363 NDLGNLLNRTVAMINKYFGGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPRAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILLQAFVPKLAN 471 V +++S ++Y D PW L K DR A+ + ++T +R +A L+Q F+ +N Sbjct: 423 EAVWNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAG-LRVVAHLIQPFMMTTSN 481 Query: 472 KIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I + L + EN F L G + PIFPR Sbjct: 482 AIMEQLGLGTAFDLENLDFAG----LPAGLTVVAKGTPIFPRL 520 >gi|312864508|ref|ZP_07724739.1| methionine--tRNA ligase [Streptococcus downei F0415] gi|311099635|gb|EFQ57848.1| methionine--tRNA ligase [Streptococcus downei F0415] Length = 669 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 202/519 (38%), Positives = 315/519 (60%), Gaps = 15/519 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I YP+ + HIG AY I DVLAR+ R+ DV + TG DEHGQKI + AQ G Sbjct: 6 FYVTTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVRYLTGLDEHGQKIQQKAQEVG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + +VD +++ +++ ++L+ISYD FIRTT+ H + +++K+ +GDIY G Y+G Sbjct: 66 ITPQEYVDGMAKDVKELWELLNISYDQFIRTTDDFHEEVVAKIFEKLLAQGDIYLGEYTG 125 Query: 127 WYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 WYS+ DE ++ + EVY+ G + V+ + EE YFFR+S Y D+L++YY Sbjct: 126 WYSVSDEEFFTESQLAEVYRDDHGNMIGGVAPSGHEVEKVSEESYFFRMSKYADRLIAYY 185 Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 + HPEFI P R NE++ +F++ GL+DL++SR T+ WGIK+P +P++++YVWIDAL NY+ Sbjct: 186 KEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGIKVPSNPKHVIYVWIDALMNYI 245 Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 T GY + KFW D +H+IGKDILRFH+IYWP L++ +LPLP ++ +HG Sbjct: 246 TALGYGQEDHANFDKFWHNDQDHEIIHMIGKDILRFHSIYWPIMLMALDLPLPTRLVAHG 305 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + + + K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +L Sbjct: 306 WFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYEL 365 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG IP+ TE D + +V + L + + M +A Sbjct: 366 ANDLGNLLNRTVAMINKYFDGEIPSYQENVTEFDADLAAVVADNLADYHKQMAAVDFPKA 425 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 L V ++++ ++Y D PW L K D+ + V+ +R +A L+Q F+ ++ Sbjct: 426 LDAVWNIIARTNKYIDETAPWVLAKDEAKRDQLADVMAHLAASLRLVAHLIQPFMMSTSD 485 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I L + + L G + PIFPR Sbjct: 486 AIMTQLGLGQDFDMANLSLAGLPSGIKVVSKGQPIFPRL 524 >gi|255322574|ref|ZP_05363719.1| methionyl-tRNA synthetase [Campylobacter showae RM3277] gi|255300482|gb|EET79754.1| methionyl-tRNA synthetase [Campylobacter showae RM3277] Length = 639 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 199/474 (41%), Positives = 298/474 (62%), Gaps = 10/474 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PHIGHAY +IAD +ARF RL G D F TGTDEHGQKI +AA G Sbjct: 5 YITTPIYYVNDVPHIGHAYTTVIADTVARFARLKGDDTYFMTGTDEHGQKIEQAAAKKGY 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + + D+ S FR++ D +ISYD FIRTT+ H T + + K+ KGDIYKG Y G+ Sbjct: 65 TPQAYADEISAKFRELWDKFEISYDHFIRTTDDYHKLTAQNAFLKMYQKGDIYKGEYEGY 124 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E+++ ++ + + P ++EE YFF+LS YQD LL +YE + + I Sbjct: 125 YCVSCESFFTQTQLL---EDERCPDCGRPTNLVKEESYFFKLSKYQDALLKWYEENEDCI 181 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244 +P ++NEV+SFVK GL+DLS++R +F+WGIK+P ++P+++MYVW+DAL NYL+T GY Sbjct: 182 VPRGKKNEVVSFVKGGLRDLSITRTSFEWGIKLPASLNEPRHVMYVWLDALINYLSTLGY 241 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D K +W H++GKDILRFHA+YWPAFL+S +LPLP+ V +HG+ GEK+S Sbjct: 242 TRGDD--KMNYWKGATHIVGKDILRFHAVYWPAFLMSLDLPLPRCVAAHGWWTRDGEKMS 299 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNVI+P EV + G++ RYF++RE+ G+DG + + + +R+N++L+N +GNL+SR Sbjct: 300 KSKGNVINPSEVADAYGLENFRYFMLREVPFGQDGDFSQKAMIERINSELSNDLGNLLSR 359 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 V M K D I E +L + LQ +N+++ +R L ++ ++ Sbjct: 360 IVGMSEKYSDFEIKGENLRKFYGE-VLDSGNEYLQNAIKNLESFATNRYLEELFKALTLA 418 Query: 425 DRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + +PW L K+ D A+ ++ + ++ ++A+LL +P+ KI L Sbjct: 419 NASIAKFEPWNLMKSGKKDEANALVSLCANLLARVAVLLSPAMPRTCEKIAQTL 472 >gi|290580003|ref|YP_003484395.1| putative methionyl-tRNA synthetase [Streptococcus mutans NN2025] gi|254996902|dbj|BAH87503.1| putative methionyl-tRNA synthetase [Streptococcus mutans NN2025] Length = 669 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 201/521 (38%), Positives = 315/521 (60%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ R+ DV + TG DEHGQKI + Sbjct: 1 MTEKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNHDVFYLTGLDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 ++ AG++ + +VD + +++ +LDISYD FIRTT+ H +++K+ +GDIY Sbjct: 61 KSEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFEKLLAQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + +E+++ DG+ + V+W+ EE YF RLS Y D Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEIFRDEDGKVIGGIAPSGHEVEWVSEESYFLRLSNYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++ +HP+FI P R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID Sbjct: 181 RLVDFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + + KFW + H++GKDILRFH+IYWP L+ +L +P+++ + Sbjct: 241 ALLNYATALGYGQDDHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLKMPERLIA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+V+MI K + G IP T+ D + +V + L + + M Sbjct: 361 ELANDLGNLLNRTVAMINKYFGGEIPAYVENVTDFDADLAAVVADNLAQYHKQMNAVDYP 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +++S ++Y D PW L K R + V+ +R +A L+Q F+ Sbjct: 421 RALETVWNIISRTNKYIDETTPWVLAKDKAKRDDLAAVMAHLAASLRVVAHLIQPFMMTT 480 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 +N I + L +A + L G + PIFPR Sbjct: 481 SNAIMEQLGLAGQFDLEGLELAGLPTGIKVIAKGTPIFPRL 521 >gi|307704594|ref|ZP_07641498.1| methionyl-tRNA ligase [Streptococcus mitis SK597] gi|307621851|gb|EFO00884.1| methionyl-tRNA ligase [Streptococcus mitis SK597] Length = 665 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVW D Sbjct: 180 RLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWFD 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY+T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP+++ Sbjct: 240 ALLNYVTALGYDQDEHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIG 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P +IE G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLIERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D ++ V + + + M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHALAEVAEQSIADYHTYMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ +R +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKP-GFMLHKTFDPIFPRF 510 + + L ++ E ++L P G + PIFPR Sbjct: 480 SRAVLTQLGLS-EVASLENLSLVDFPAGVTVVAKGTPIFPRL 520 >gi|324991378|gb|EGC23311.1| methionine--tRNA ligase [Streptococcus sanguinis SK353] Length = 665 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 198/521 (38%), Positives = 314/521 (60%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI Sbjct: 1 MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQA 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG++ + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 61 KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ +G+ + V+W+ EE YF RLS YQD Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG +P T+ DE + ++ M Sbjct: 361 ELANDLGNLLNRTVSMINKYFDGRVPDYEENVTDFDEDLQDCAKESIRMYHSYMNGVNYP 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 +AL ++ +L+S ++Y D PW L K ++ ++V+ +R +A L++ F+ + Sbjct: 421 KALEEIWTLISRTNKYIDETTPWILAKDEALRNQLASVMSHLAASLRVVAHLIKPFMMET 480 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L + +L G + + PIFPR Sbjct: 481 SKAVLGQLGLPQAASLENLAIDQLPAGMTVVEKGTPIFPRL 521 >gi|116513491|ref|YP_812397.1| methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092806|gb|ABJ57959.1| methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 660 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 201/520 (38%), Positives = 308/520 (59%), Gaps = 16/520 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + IG+AY + AD + R+ + G D F TGTDEHG KI + A+ Sbjct: 5 KKTFYITTPIYYPSGRLTIGNAYTTVAADTMTRYKKARGYDTFFLTGTDEHGLKIEQKAE 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ K ++D ++ +++ LDI+YD FIRTT++ H + +++K+ GDIY G Sbjct: 65 KLGMKPKAYLDGMVKDIKELWKKLDINYDKFIRTTDEEHVKAVQKIFEKLKASGDIYLGE 124 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 Y+GWYS+ DE Y+ + EV+K G + VQ ++E YFF++S Y D+LL Sbjct: 125 YTGWYSVEDEEYFTESQLKEVFKDDQGNVVGGIAPSGHEVQLVKEPSYFFKMSKYADRLL 184 Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 YY+ HPEFI P R E+++ F+K GL+DLS++R T DWGI +P DP++++YVWIDAL Sbjct: 185 QYYKDHPEFIQPNSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDALA 244 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NY+T GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK+VF HG++ Sbjct: 245 NYITALGYGSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGWV 304 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L +K+SKS GN + P +I G+D +RY+L+R I G DG + + +R N DLAN Sbjct: 305 LIYKDKMSKSKGNAVYPESLISRYGLDPVRYYLMRAIPFGADGSFTPEDFVERTNFDLAN 364 Query: 357 GIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 +GNL++R+VSMI + G++ P + + + +V ++ + + NM AL Sbjct: 365 DLGNLLNRTVSMINQYQKGLVAPVDQEQDKYGQDLAAVAAKAISDYYGNMDKMHFSNALE 424 Query: 416 QVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 V L+S ++Y D PW L K+ + S V+ E +R +AI++ + + K+F Sbjct: 425 NVWQLISRANKYIDETTPWVLNKEGKTEELSRVMSNLAESLRLVAIMIAPVMTETPGKMF 484 Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510 L + E+ + L GF PIFPR Sbjct: 485 AQLGLDWEDESQKDLQFG---GFAWDVNVVAKPTPIFPRL 521 >gi|325848878|ref|ZP_08170388.1| methionine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480522|gb|EGC83584.1| methionine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 645 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 206/489 (42%), Positives = 305/489 (62%), Gaps = 11/489 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ YI+T I YPN+ HIG+ Y +IADVL R+ L G D TTGTDEHGQKI AA Sbjct: 2 DKNTYYITTPIYYPNSNLHIGNVYTSVIADVLKRYKTLQGFDSYLTTGTDEHGQKIMNAA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + G + FVD+ + +D+ LDI YD FIR+T+ +H + + +++ + DKGDIYKG Sbjct: 62 LSHGSKPQPFVDKIAAETQDLLKKLDIDYDCFIRSTDPKHEENVKNIFQYLYDKGDIYKG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G+Y E+Y+ + ++ +G A V +EE YFF+LS Y DKL ++ Sbjct: 122 EYDGYYCESCESYFTESQLDEGNCPDCGRA----VDHHKEESYFFKLSKYTDKLKELFKD 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEF+ P R+NE+++ F+ GL+DLS+SR TFDWG+ +P D ++++YVWIDAL+ YLT Sbjct: 178 HPEFLEPKFRQNEMLNNFINKGLEDLSVSRNTFDWGVDVPFDNEHVVYVWIDALSCYLTA 237 Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY D K K+WPA +H+IGKDI+RFH I WPA L++ ++PLP+KVF+HG+IL Sbjct: 238 IGY--GHDMEKFNKYWPAGVHLIGKDIVRFHTIIWPALLMALDIPLPRKVFAHGWILFDN 295 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKS GN++ P ++E G DAL+YFL+RE G DG + R N+DL N +GN Sbjct: 296 DKMSKSKGNIMYPEPLVELYGTDALKYFLLREFNFGSDGNFLSKKFMDRYNSDLVNDLGN 355 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+SR+VSMI K DG+I DE ++++C + ++ + M + + AL + +L Sbjct: 356 LLSRTVSMISKYNDGIIKKGSETDSYDEDLINLCHKTYEDFTKLMDDFKFNEALECLWNL 415 Query: 421 VSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 V ++Y D +PW L + +R +TVLY E +R +A +L+ + +I L + Sbjct: 416 VRRSNKYVDQTEPWILGREEKYERLNTVLYNLAESLRIVAQMLEPVMRNTTEEILKQLGL 475 Query: 480 ADENRCFQS 488 EN+ F S Sbjct: 476 --ENKGFAS 482 >gi|223039853|ref|ZP_03610137.1| methionyl-tRNA synthetase [Campylobacter rectus RM3267] gi|222878862|gb|EEF13959.1| methionyl-tRNA synthetase [Campylobacter rectus RM3267] Length = 639 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 199/474 (41%), Positives = 297/474 (62%), Gaps = 10/474 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PHIGHAY +IAD +ARF RL G D F TGTDEHGQKI +AA G Sbjct: 5 YITTPIYYVNDVPHIGHAYTTVIADTVARFARLKGDDTYFMTGTDEHGQKIEQAAAKKGY 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + + D+ S FR++ D +ISYD FIRTT+ H T + + K+ KGDIYKG Y G+ Sbjct: 65 TPQAYADEISAKFRELWDKFEISYDHFIRTTDDYHKLTAQNAFLKMYQKGDIYKGEYEGY 124 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E+++ ++ + + P ++EE YFF+LS YQD LL +YE + + I Sbjct: 125 YCVSCESFFTQTQLL---EDERCPDCGRPTNLVKEESYFFKLSKYQDALLKWYEENEDCI 181 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244 +P ++NEVISFVK GL+DLS++R +F+WG+K+P ++P+++MYVW+DAL NYL+T GY Sbjct: 182 VPRGKKNEVISFVKGGLRDLSITRTSFEWGVKLPASLNEPKHVMYVWLDALINYLSTLGY 241 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D K +W H++GKDILRFHA+YWPAFL+S +LPLP+ V +HG+ GEK+S Sbjct: 242 TRGDD--KMNYWKGATHIVGKDILRFHAVYWPAFLMSLDLPLPRCVAAHGWWTRDGEKMS 299 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNVI+P EV + G++ RYF++RE+ G+DG + + + +R+N++L+N +GNL+SR Sbjct: 300 KSKGNVINPSEVADAYGLENFRYFMLREVPFGQDGDFSQKAMIERINSELSNDLGNLLSR 359 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 V M K D I E +L + LQ +N+++ +R L ++ ++ Sbjct: 360 IVGMSEKYSDFEIKGENLRKFYGE-VLDSGNEYLQNAIKNLESFATNRYLEELFKALTLA 418 Query: 425 DRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + +PW L K D A+ ++ + ++ ++A+LL +P+ KI L Sbjct: 419 NASIAKFEPWNLMKNGKKDEANALVSLCANLLARVAVLLSPAMPRTCEKIAQTL 472 >gi|168486199|ref|ZP_02710707.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00] gi|183570793|gb|EDT91321.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00] Length = 665 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 205/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G V + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYYVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQTYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D+LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDSLRYYLMRNLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D + V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ IR +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + +E ++L P + PIFPR Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520 >gi|253753801|ref|YP_003026942.1| methionyl-tRNA synthetase [Streptococcus suis P1/7] gi|251820047|emb|CAR46270.1| methionyl-tRNA synthetase [Streptococcus suis P1/7] gi|292558559|gb|ADE31560.1| Methionyl-tRNA synthetase, class Ia [Streptococcus suis GZ1] Length = 667 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 206/523 (39%), Positives = 318/523 (60%), Gaps = 21/523 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI + A+ Sbjct: 3 KTPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIEEKAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T + +VD + +++ ++LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 63 EAGLTPQAYVDGMAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122 Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + +EV++ +G+ + V W+ EE YF RLS YQDKL+ Sbjct: 123 YSGWYSVSDEEFFTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKLV 182 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++ +HP+FI P R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL Sbjct: 183 EFFNAHPDFIQPDGRLNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDALL 242 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ +HG+ Sbjct: 243 NYATALGYGQEETVNYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDRLVAHGW 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K + G +PT A T+ D + +V + L + M+ RAL Sbjct: 363 NDLGNLLNRTVAMINKYFGGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPRAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILLQAFVPKLAN 471 V +++S ++Y D PW L K DR A+ + ++T +R +A L+Q F+ +N Sbjct: 423 EAVWNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAG-LRVVAHLIQPFMMTTSN 481 Query: 472 KIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I + L + EN F L G + PIFPR Sbjct: 482 AIMEQLGLGTAFDLENLDFAG----LPAGLTVVAKGTPIFPRL 520 >gi|301060390|ref|ZP_07201253.1| methionine--tRNA ligase [delta proteobacterium NaphS2] gi|300445586|gb|EFK09488.1| methionine--tRNA ligase [delta proteobacterium NaphS2] Length = 642 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 219/515 (42%), Positives = 310/515 (60%), Gaps = 21/515 (4%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 EK YI+T I Y NA+PHIGHAY I+ADVL RFH+L G D F TGTDEHG KI AA+N Sbjct: 3 EKYYITTPIYYVNAEPHIGHAYTTIVADVLNRFHKLAGFDTFFLTGTDEHGDKIVAAAEN 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG T K + D+ S F+ + L+IS FIRTT+ H +T R + + +K DIY Y Sbjct: 63 AGQTPKQYTDRISAMFQGLWPRLNISNSAFIRTTDAYHQETVRNILSLVKEKDDIYFSEY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y E +Y + E+ DG+ + Q P ++E YFFR+S YQ+ L+ + + +P Sbjct: 123 EGLYCFGCERFYTEKEL---VDGKCPDHQKEP-DVIKEANYFFRMSRYQEWLIEHIKKNP 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 FI P RNEV+SF+ L+DL +SR WGI +P D ++ YVW DAL NY++ Sbjct: 179 SFIRPERYRNEVLSFLSEPLEDLCISRPKSRLKWGITLPFDEDFVTYVWFDALINYVSAL 238 Query: 243 GYLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY P+G+ + FWP HVI KDIL+ H IYWP L SA + + + HG+ Sbjct: 239 GY---PEGADFQDFWPVAQHVIAKDILKPHGIYWPCMLKSAGIEPYQHLNVHGYWNIDAG 295 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS+GNV++P+E+++ G+D RYFL+RE+A G D + +D L +R+NADLAN +GNL Sbjct: 296 KMSKSIGNVVEPLELVDIYGLDPFRYFLMREMAFGLDSEFSEDALVQRLNADLANDLGNL 355 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420 VSRS++M+ K ++G +P G +E DE+ L + +L EI + NQL H+AL V + Sbjct: 356 VSRSLTMVHKYFEGALPGAGPSSEEDEA-LKNNAVLLIEIYQGHMNQLAFHKALMAVWEV 414 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +S+V++Y D PW L K++P+R TV+ E +R +A L+ F+P A KI + L + Sbjct: 415 ISDVNKYIDRMAPWVLAKSDPERLKTVINHIFETLRIVAGLVWPFMPASAEKIQEQLGLT 474 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPI------FPR 509 + + D R + L K PI FPR Sbjct: 475 HKGDQCRLTDLRT---WGLEKPTHPILKAPGLFPR 506 >gi|251771721|gb|EES52296.1| methionyl-tRNA synthetase [Leptospirillum ferrodiazotrophum] Length = 673 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 206/485 (42%), Positives = 297/485 (61%), Gaps = 16/485 (3%) Query: 1 MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M +R Y++T I Y N PHIGHAY + ADVLAR HRL G V F TGTDEHGQK+ Sbjct: 1 MSDRSPWFYLTTPIYYVNDIPHIGHAYTTVAADVLARTHRLLGEPVFFLTGTDEHGQKVW 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 ++A+ G+ +V+VD+ FR++ + L IS DDF+RTT+ RH + R + +KGDI Sbjct: 61 QSAERHGLPPQVYVDRILPRFRELWEKLVISNDDFVRTTQPRHVEGVREALSLLLEKGDI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 Y+G Y GWY L DE ++ D +V +G + PV+ + E YFFR+ YQD L+S+ Sbjct: 121 YEGAYEGWYCLPDERFWTDKDVEEGLCPEC----RRPVERISETNYFFRMGRYQDWLVSH 176 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237 YE+HPE + P R NEV+ F++ L DL +SR WGI +P P Y+ YVW DAL N Sbjct: 177 YEAHPEAVRPESRYNEVMGFLRKPLGDLCISRPKSRVPWGIPLPFAPDYVTYVWFDALLN 236 Query: 238 YLTTTGYL-DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 Y+T L P+ ++ WP H++GKDIL HA+YWP L + LP P+ +F+HG+ Sbjct: 237 YITVPRSLGPTPEEGLSRLWPGT-HIVGKDILTTHAVYWPILLRALELPPPRLIFAHGWW 295 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 G+K+SKS GNV+DP+ ++E G DA RYFL+RE G+D + ++ L R+N DLAN Sbjct: 296 TVDGQKMSKSRGNVVDPVGLVETFGPDATRYFLLREGQFGQDVDFSREALINRINRDLAN 355 Query: 357 GIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 +GNL+SR +M +K + +G IP P E + + +R+L E+ HRALA Sbjct: 356 DLGNLLSRVAAMAVKFFPEGGIPRPAG--EGMREVETFAARLLPEVVSRTVALEFHRALA 413 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANK 472 + V ++R DA+ PW L + +P R+ + VLY +E +R +A+ L ++P A++ Sbjct: 414 TLWEFVGFLNRTVDARAPWVLAR-DPSRSQELAEVLYDLLEGLRLVAVHLTPYLPGTADR 472 Query: 473 IFDIL 477 IF+IL Sbjct: 473 IFEIL 477 >gi|319758341|gb|ADV70283.1| methionyl-tRNA synthetase [Streptococcus suis JS14] Length = 667 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 206/523 (39%), Positives = 318/523 (60%), Gaps = 21/523 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI + A+ Sbjct: 3 KTPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIEEKAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T + +VD + +++ ++LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 63 EAGLTPQAYVDGMAVGVQELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122 Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + +EV++ +G+ + V W+ EE YF RLS YQDKL+ Sbjct: 123 YSGWYSVSDEEFFTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKLV 182 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++ +HP+FI P R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL Sbjct: 183 EFFNAHPDFIQPDGRLNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDALL 242 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ +HG+ Sbjct: 243 NYATALGYGQEETVNYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDRLVAHGW 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K + G +PT A T+ D + +V + L + M+ RAL Sbjct: 363 NDLGNLLNRTVAMINKYFGGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPRAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILLQAFVPKLAN 471 V +++S ++Y D PW L K DR A+ + ++T +R +A L+Q F+ +N Sbjct: 423 EAVWNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAG-LRVVAHLIQPFMMTTSN 481 Query: 472 KIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I + L + EN F L G + PIFPR Sbjct: 482 AIMEQLGLGTAFDLENLDFAG----LPAGLTVVAKGTPIFPRL 520 >gi|56750417|ref|YP_171118.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 6301] gi|81299951|ref|YP_400159.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 7942] gi|56685376|dbj|BAD78598.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 6301] gi|81168832|gb|ABB57172.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 7942] Length = 525 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 201/511 (39%), Positives = 297/511 (58%), Gaps = 15/511 (2%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y N PHIG AY I AD +ARFHRL G VL TG+DEHGQKI + A+ G Sbjct: 7 LTTPLYYVNDVPHIGSAYTTIAADAIARFHRLQGDRVLMITGSDEHGQKIQRTAEKNGKP 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + + F+D+ +L+I YD F RTT+ RH + ++++ +GDIY G GWY Sbjct: 67 PQEHCNAIVARFQDLWQLLNIRYDRFSRTTDPRHQAIVEVFYRRVEAQGDIYVGRQQGWY 126 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + + ++ + + Q V+W +EE YFFRLS YQ+ L ++Y ++P+FI Sbjct: 127 CVACEEFKEERDLLEDKRCPIHTNQ--AVEWRDEENYFFRLSRYQEALEAHYAANPDFIQ 184 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P RRNEV+SFV+ GL+D S+SR +WG +PD+P++ +YVW DAL Y+T L +P Sbjct: 185 PESRRNEVLSFVERGLQDFSISRVNLEWGFAVPDNPKHTLYVWFDALLGYVTA---LLDP 241 Query: 249 DGSK------AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 D +++WP +LH+IGKDILRFHA+YWPA LLSA LPLP +VF HGF+ G K Sbjct: 242 DAEPTLENALSQWWPINLHLIGKDILRFHAVYWPAMLLSAGLPLPDRVFGHGFLTKDGLK 301 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 + KSLGN +DP ++++ G DA+RY+ ++EI G+DG Y + VNADLAN +GNL+ Sbjct: 302 MGKSLGNTLDPFDLVDRFGSDAVRYYFLKEIEFGRDGDYQETRFVNVVNADLANDLGNLL 361 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 +R++SM + IP +D + + ++ A Q+++LV Sbjct: 362 NRTLSMAKRYCQLQIPLGSTAIAADNPLRQQGEALTDSVKSAYDRLAFSEACGQILALVQ 421 Query: 423 EVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVA 480 +RY D + PW K+ + +LY +E +R A L VP ++ +I+ L VA Sbjct: 422 AGNRYLDQEAPWTRFKQGEQAKVEEILYTVLESVRLAAYWLSPLVPGISQEIYRQLGLVA 481 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 D N ++ Q+L P H F P +FL Sbjct: 482 DFND--PAIAQQLDPESHGHWGFLPAAQQFL 510 >gi|322375421|ref|ZP_08049934.1| methionine--tRNA ligase [Streptococcus sp. C300] gi|321279684|gb|EFX56724.1| methionine--tRNA ligase [Streptococcus sp. C300] Length = 665 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 203/521 (38%), Positives = 312/521 (59%), Gaps = 12/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMVVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYGQDDHTNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D ++ V + + + +M Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAEVAEQSIADYHTHMDAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ +R +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L +A+ + G + PIFPR Sbjct: 480 SRAVLTQLGLAEVSSLENLSLADFPAGVTVVAKGTPIFPRL 520 >gi|300812080|ref|ZP_07092528.1| methionine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496919|gb|EFK31993.1| methionine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 660 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 201/520 (38%), Positives = 307/520 (59%), Gaps = 16/520 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + IG+AY + AD + R+ + G D F TGTDEHG KI + A+ Sbjct: 5 KKTFYITTPIYYPSGRLTIGNAYTTVAADTMTRYKKARGYDTFFLTGTDEHGLKIEQKAE 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ K ++D ++ +++ LDI+YD FIRTT++ H + +++K+ GDIY G Sbjct: 65 KLGMKPKAYLDGMVKDIKELWKKLDINYDKFIRTTDEEHVKAVQKIFEKLKASGDIYLGE 124 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 Y+GWYS+ DE Y+ + EV+K G + VQ ++E YFF++S Y D+LL Sbjct: 125 YTGWYSVEDEEYFTESQLKEVFKDDQGNVVGGIAPSGHEVQLVKEPSYFFKMSKYADRLL 184 Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 YY+ HPEFI P R E+++ F+K GL+DLS++R T DWGI +P DP++++YVWIDAL Sbjct: 185 QYYKDHPEFIQPNSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDALA 244 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NY+T GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK+VF HG++ Sbjct: 245 NYITALGYGSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGWV 304 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L +K+SKS GN + P +I G+D +RY+L+R I G DG + + +R N DLAN Sbjct: 305 LIYKDKMSKSKGNAVYPESLISRYGLDPVRYYLMRAIPFGADGSFTPEDFVERTNFDLAN 364 Query: 357 GIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 +GNL++R+VSMI + G++ P + + + +V ++ + + NM AL Sbjct: 365 DLGNLLNRTVSMINQYQKGLVAPVDQDQDKYGQDLAAVAAKAISDYYGNMDKMHFSNALE 424 Query: 416 QVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 V L+S ++Y D PW L K + S V+ E +R +AI++ + + K+F Sbjct: 425 NVWQLISRANKYIDETTPWVLNKEGMTEELSRVMSNLAESLRLVAIMIAPVMTETPGKMF 484 Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510 L + E+ + L GF PIFPR Sbjct: 485 AQLGLDWEDESQKDLQFG---GFAWDVNVVAKPTPIFPRL 521 >gi|225869045|ref|YP_002744993.1| methionyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] gi|225702321|emb|CAX00124.1| methionyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] Length = 667 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 201/522 (38%), Positives = 316/522 (60%), Gaps = 13/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + HIG AY I DVLAR+ R+ G DV + TG DEHGQKI Sbjct: 1 MTKKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGYDVFYLTGLDEHGQKIQD 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ AG++ + +VD + + + +LDISYD FIRTT+ H + +++++ + DIY Sbjct: 61 KAQEAGLSPQAYVDGMAEEVKALWKLLDISYDKFIRTTDDYHEEVVAAVFERLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EVY+ G+ + V+W+ EE YF RLS Y D Sbjct: 121 LGTYSGWYSVSDEEFFTESQLAEVYRDEAGKVIGGVAPSGHEVEWVSEESYFLRLSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L++++++ P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWID Sbjct: 181 RLVAFFKAQPDFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P+++ + Sbjct: 241 ALLNYATALGYGQKDHANFDKFWSGRVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNVI P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+V+MI K +DG +P T D + V + + E + M+ Sbjct: 361 ELANDLGNLLNRTVAMINKYFDGRVPAYVKNVTAFDADLEQVVADHISEYHKQMEAVDYP 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +++S ++Y D PW L K + ++ ++V+ +R +A L+ F+ Sbjct: 421 RALEAVWTIISRTNKYIDETAPWVLAKAADSKEQLASVMAHLAASLRVVAHLIWPFMMTT 480 Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 + + + L + D + LD L G + +PIFPR Sbjct: 481 SAAMMEQLGL-DATYHLEELDLADLPTGVTVVAKGEPIFPRL 521 >gi|313891268|ref|ZP_07824886.1| methionine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] gi|313120335|gb|EFR43456.1| methionine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] Length = 668 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 206/526 (39%), Positives = 315/526 (59%), Gaps = 20/526 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + HIG AY I DVLAR+ RL +V + TG DEHGQKI Sbjct: 1 MTDKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMNHEVFYLTGLDEHGQKIQT 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + + + + +LDISYD FIRTT+ H + +++K+ + DIY Sbjct: 61 KAEEAGITPQTYVDGMASDVKKLWALLDISYDKFIRTTDTYHEEVVAQVFEKLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + +EV+ +G+ + V+W+ EE YF RL Y D Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFHDENGKVIGGTAPSGHKVEWVSEESYFLRLGKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL++Y+ +P+FI P R NE++ +F++ GL+DL++SR TF WG+K+P +P++++YVWID Sbjct: 181 RLLAFYKENPQFIQPNGRLNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSNPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291 AL NY T GY + KFW H++GKDILRFH+IYWP L+ + LP+++ Sbjct: 241 ALLNYATALGYGQKDSHNFEKFWNQGRVFHMVGKDILRFHSIYWPILLMMLEMKLPERLI 300 Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 +HG+ + K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + R+N Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGMFTPEDYIGRIN 360 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLI 410 +LAN +GNL++R+++MI K +DG IP T D + +V + + E M+ Sbjct: 361 YELANDLGNLLNRTIAMINKYFDGQIPDYQAGVTHFDADLEAVVAAQIAEYHVQMEAVDY 420 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPK 468 RAL V +++S ++Y D PW L K N + ++V+ +R +A LLQ F+ + Sbjct: 421 PRALEAVWTIISRANKYIDETAPWLLAKEDGNKEDLASVMAHLAASLRVVAHLLQPFMME 480 Query: 469 LANKIFDIL---FVAD-ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 +N I L VAD EN + P + PIFPR Sbjct: 481 TSNAIMTQLGLEAVADLENLSLAG----IPPQTTVISKGQPIFPRL 522 >gi|223935818|ref|ZP_03627733.1| methionyl-tRNA synthetase [bacterium Ellin514] gi|223895419|gb|EEF61865.1| methionyl-tRNA synthetase [bacterium Ellin514] Length = 517 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 196/484 (40%), Positives = 296/484 (61%), Gaps = 22/484 (4%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+TAI Y N + H+GHAYEM+IADV+AR R G +V F TG DEHGQK+ +AAQ G Sbjct: 5 FYITTAIYYVNGEAHLGHAYEMVIADVIARSRRSLGTEVFFLTGLDEHGQKVQQAAQFKG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 ++ + + D+ S +R MA L+++ DDF+RTTE RH + + + K++++G YK Y G Sbjct: 65 LSPQQYCDELSLIWRTMAQKLELTIDDFVRTTEPRHKEVVQAILSKLNNEGHFYKAAYKG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 +YS R+E + + + + DG + A + V ++EE Y+F+L +Q L+ Y ES P F Sbjct: 125 YYSTREETFLTEKD--RLPDGNF-PASYGEVTELQEENYYFKLKDHQQWLIDYIESTPSF 181 Query: 187 ILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 I P RRNEV+ F+K+ L+DL ++R +WGI +P D ++ YVW DAL NY++ Sbjct: 182 IQPEYRRNEVLGFLKNNTLEDLCITRPINRLNWGIPVPFDTNFVTYVWFDALVNYISIPA 241 Query: 244 YLDNP--------DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 +P G WPAD HVIGKDIL+FH++YWP L + LPLP+++ HG+ Sbjct: 242 AHGDPVVLSALGRTGQGLPLWPADTHVIGKDILKFHSVYWPIMLKAMGLPLPRQLLVHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 G+K+SK+ GNV+DP+ V+ E G+DA R+++VRE+A G DG + G + R A+LA Sbjct: 302 WQKDGQKLSKTTGNVVDPLAVVNEWGIDAFRFYVVRELAIGPDGNWTDGGFQARYQAELA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 NG+GNLV+RS+SM+ + +G++P E + + +V+ E R +++ + AL Sbjct: 362 NGLGNLVNRSLSMLKRYRNGIVP------ERSDELAPEAGKVIAETRAHLEQNGLQAALL 415 Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + LV+ ++Y D P+ L K R VLY E R LAILL F+P + +I Sbjct: 416 SIWELVNRANQYVDQTAPFRLAKDPAQSKRLDEVLYNLAESCRILAILLAPFIPGTSERI 475 Query: 474 FDIL 477 ++ L Sbjct: 476 YNQL 479 >gi|315613349|ref|ZP_07888258.1| methionine--tRNA ligase [Streptococcus sanguinis ATCC 49296] gi|315314584|gb|EFU62627.1| methionine--tRNA ligase [Streptococcus sanguinis ATCC 49296] Length = 679 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 204/522 (39%), Positives = 317/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 15 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 74 KAEEAGITPQAYVDSMAVGVKELWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQ+ Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQN 193 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 194 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 254 ALLNYATALGYGQEDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDMKLPDRLIA 313 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 373 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP TE D ++ V + + + +M+ Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAQVAEQSISDFHTHMEAVDYP 433 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K + D+ ++V+ +R +A L++ F+ + Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEEHRDQLASVMSHLAASLRVVAHLIEPFMMET 493 Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 + + L +A E ++L+ L + PIFPR Sbjct: 494 SRAVLTQLGLA-EVASLENLNLADLPSDVNVVAKGTPIFPRL 534 >gi|34556660|ref|NP_906475.1| methionyl-tRNA synthetase [Wolinella succinogenes DSM 1740] gi|34482374|emb|CAE09375.1| METHIONYL-TRNA SYNTHETASE [Wolinella succinogenes] Length = 649 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 205/509 (40%), Positives = 306/509 (60%), Gaps = 12/509 (2%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K +I+T I Y N PHIGHAY +I D LA ++RL G + F TGTDEHGQKI ++AQ Sbjct: 4 KSFITTPIYYVNDIPHIGHAYTTMIGDSLAHYYRLIGHETFFLTGTDEHGQKIEQSAQKK 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T + + D+ S F+ + D +ISYD FIRTT+ +H + + K+ +KGDIYKG Y Sbjct: 64 GKTPQAYADEISGAFKSLWDRFEISYDHFIRTTDAKHKQGVQKAFLKMFEKGDIYKGEYE 123 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y + E ++ ++ D Y ++EE YFF LS YQ+KLL++Y+ +P+ Sbjct: 124 GHYCVSCETFFTKRQL---VDDLYCPECGKETSLVKEESYFFALSRYQEKLLAWYKENPD 180 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD---PQYIMYVWIDALTNYLTTT 242 ILP ++NEV+ FV+SGL DLS++R +FDWG+K+P + P+++MYVW+DAL NY+T Sbjct: 181 CILPKPKKNEVMRFVESGLDDLSITRTSFDWGVKLPQEMNAPKHVMYVWLDALLNYVTAL 240 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY D D + FWPA +H++GKDILRFHAIYWPAFL+S +LPLPK V +HG+ G K Sbjct: 241 GYGD--DEKRMDFWPARVHLVGKDILRFHAIYWPAFLMSLDLPLPKHVAAHGWWTRNGAK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNVI+P EV + GV+ RYF++RE+ G+DG + + L R+N+DL+N +GNL+ Sbjct: 299 MSKSVGNVINPQEVADAYGVEPFRYFMLREVPFGQDGDFSQKALIDRLNSDLSNDLGNLL 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 +R M K +D I T T L +L + +Q HR L ++ + + Sbjct: 359 NRLGGMSGKYFDYQI-TSKEVTTFHAKELQEAELILDSLHGYIQEMQPHRYLEELWKIFT 417 Query: 423 EVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 + +PW+L K + +A ++ + ++ + ++L +PK A KI L + Sbjct: 418 IANTAIAMHEPWKLMKEGKESQAMALVALIANLLAKATLMLSPIMPKSAAKIAQALNLEI 477 Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 ++ L ++ + TF P P F Sbjct: 478 STASYERL--IIQKALLEEFTFTPTPPLF 504 >gi|325684670|gb|EGD26824.1| methionine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 673 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 199/517 (38%), Positives = 308/517 (59%), Gaps = 10/517 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + IG+AY + AD + R+ + G D F TGTDEHG KI + A+ Sbjct: 18 KKTFYITTPIYYPSGRLTIGNAYTTVAADTMTRYKKSRGYDTFFLTGTDEHGLKIEQKAE 77 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ K ++D ++ +++ LDI+YD FIRTT++ H + +++K+ GDIY G Sbjct: 78 KLGMKPKAYLDGMVKDIKELWKKLDINYDKFIRTTDEEHVKAVQKIFEKLKASGDIYLGE 137 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 Y+GWYS+ DE Y+ + EV+K G + VQ ++E YFF++S Y D+LL Sbjct: 138 YTGWYSVEDEEYFTESQLKEVFKDDQGNVVGGIAPSGHEVQLVKEPSYFFKMSKYADRLL 197 Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 YY+ HPEFI P R E+++ F+K GL+DLS++R T DWGI +P DP++++YVWIDAL Sbjct: 198 QYYKDHPEFIQPNSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDALA 257 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NY+T GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK+VF HG++ Sbjct: 258 NYITALGYGLEDDTLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGWV 317 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L +K+SKS GN + P +I G+D +RY+L+R I G DG + + +R N DLAN Sbjct: 318 LIYKDKMSKSKGNAVYPESLISRYGLDPVRYYLMRAIPFGADGSFTPEDFVERTNFDLAN 377 Query: 357 GIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 +GNL++R+VSMI + G++ P + + + +V ++ + + NM AL Sbjct: 378 DLGNLLNRTVSMINQYQKGLVAPVDQEQDKYGQDLAAVAAKAISDYYGNMDKMHFSNALE 437 Query: 416 QVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 V L+S ++Y D PW L K+ + S V+ E +R +AI++ + + ++F Sbjct: 438 SVWQLISRANKYIDETTPWVLNKEGKTEELSRVMSNLAESLRLVAIMIAPVMTETPGRMF 497 Query: 475 DILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 L + E+ + L G + PIFPR Sbjct: 498 AQLGLDWEDESQKDLQFGGFAWGVNVVAKPTPIFPRL 534 >gi|225869985|ref|YP_002745932.1| methionyl-tRNA synthetase [Streptococcus equi subsp. equi 4047] gi|225699389|emb|CAW92834.1| methionyl-tRNA synthetase [Streptococcus equi subsp. equi 4047] Length = 667 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 199/521 (38%), Positives = 314/521 (60%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + HIG AY I DVLAR+ R+ G DV + TG DEHGQKI Sbjct: 1 MTKKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMLGYDVFYLTGLDEHGQKIQD 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ AG++ + +VD + + + +LDISYD FIRTT H + +++++ + DIY Sbjct: 61 KAQEAGLSPQAYVDGMAEEVKALWKLLDISYDKFIRTTGDYHEEVVAAVFERLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EVY+ G+ + V+W+ EE YF RLS Y D Sbjct: 121 LGTYSGWYSVSDEEFFTESQLAEVYRDEAGKVIGGVAPSGHEVEWVSEESYFLRLSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L++++++ P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 181 RLVAFFKAQPDFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P+++ + Sbjct: 241 ALLNYATALGYGQKDHANFDKFWSGRVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNVI P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+V+MI K +DG +P T D + V + + E + M+ Sbjct: 361 ELANDLGNLLNRTVAMINKYFDGRVPAYVRNVTAFDADLEQVVADHISEYHKQMEAVDYP 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +++S ++Y D PW L K + ++ ++V+ +R +A L+Q F+ Sbjct: 421 RALEAVWTIISRTNKYIDETAPWVLAKAADSKEQLASVMAHLAASLRVVAHLIQPFMMTT 480 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + I + L + + + L G + +PIFPR Sbjct: 481 SAAIMEQLGLGAKYHLEELDLADLPTGVTVVAKGEPIFPRL 521 >gi|313123059|ref|YP_004033318.1| methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279622|gb|ADQ60341.1| Methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 660 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 201/520 (38%), Positives = 308/520 (59%), Gaps = 16/520 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + IG+AY + AD + R+ + G D F TGTDEHG KI + A+ Sbjct: 5 KKTFYITTPIYYPSGRLTIGNAYTTVAADTMTRYKKARGYDTFFLTGTDEHGLKIEQKAE 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ K ++D ++ +++ LDI+YD FIRTT++ H + +++K+ GDIY G Sbjct: 65 KLGMKPKAYLDGMVKDIKELWKKLDINYDKFIRTTDEEHVKAVQKIFEKLKASGDIYLGE 124 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 Y+GWYS+ DE Y+ + EV+K G + VQ ++E YFF++S Y D+LL Sbjct: 125 YTGWYSVEDEEYFTESQLKEVFKDDQGNVVGGIAPSGHEVQLVKEPSYFFKMSKYADRLL 184 Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 YY+ HPEFI P R E+++ F+K GL+DLS++R T DWGI +P DP++++YVWIDAL Sbjct: 185 QYYKDHPEFIQPNSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDALA 244 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NY+T GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK+VF HG++ Sbjct: 245 NYITALGYGLEDDTLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGWV 304 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L +K+SKS GN + P +I G+D +RY+L+R I G DG + + +R N DLAN Sbjct: 305 LIYKDKMSKSKGNAVYPESLISRYGLDPVRYYLMRAIPFGADGSFTPEDFVERTNFDLAN 364 Query: 357 GIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 +GNL++R+VSMI + G++ P + + + +V ++ + + NM AL Sbjct: 365 DLGNLLNRTVSMINQYQKGLVAPVDQEQDKYGQDLAAVAAKAISDYYGNMDKMHFSNALE 424 Query: 416 QVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 V L+S ++Y D PW L K+ + S V+ E +R +AI++ + + K+F Sbjct: 425 NVWQLISRANKYIDETTPWVLNKEGKTEELSRVMSNLAESLRLVAIMIAPVMTETPGKMF 484 Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510 L + E+ + L GF PIFPR Sbjct: 485 AQLGLDWEDESQKDLQFG---GFAWDVNVVAKPTPIFPRL 521 >gi|331701956|ref|YP_004398915.1| methionyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] gi|329129299|gb|AEB73852.1| Methionyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] Length = 675 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 204/519 (39%), Positives = 309/519 (59%), Gaps = 12/519 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + + YI+T I YP+ + HIG++Y I D ARF R G DV F TGTDEHG KI + Sbjct: 3 ESKPTFYITTPIYYPSGKLHIGNSYTTIACDAEARFKRAMGYDVFFLTGTDEHGLKIEQK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ K +VDQ + + + + L+IS FIRTT+ H +++K+ D GDIY Sbjct: 63 AEQLGMSPKDYVDQMAASIKQLWKKLEISNTKFIRTTDDYHEKAVADIFQKLLDNGDIYL 122 Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175 G Y+GWYS+ DE Y+ + EVY+ +G+ + + VQ + E+ YFF++S Y D Sbjct: 123 GEYTGWYSVSDEEYFTESQLAEVYRDKNGKVTGGKAPSGHEVQLVHEQSYFFKMSKYADW 182 Query: 176 LLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 LL YY+ +P FI P R NE+I +F++ GL+DL++SR TF WG+ + DP++++YVWIDA Sbjct: 183 LLRYYKDNPNFIQPATRMNEMIKNFIEPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWIDA 242 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 LTNY+T GY D + K+WPA++ ++GK+I+RFH IYWP L + LPLPK V+ HG Sbjct: 243 LTNYITALGYDGKDDSNFKKYWPANVQMVGKEIVRFHTIYWPIILHALGLPLPKTVYGHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 ++L K K+SKS GNVI P +++ G+DALRY+L+R + DG + + R+N DL Sbjct: 303 WLLMKDGKMSKSKGNVIYPETLVDRYGLDALRYYLLRAMPYANDGLFTPEDFIDRLNFDL 362 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+VSMI K G++P E+D+ + + V+ ++ M + A Sbjct: 363 ANDLGNLLNRTVSMINKYDGGILPAYKAGVNEADKELEETAATVIANYKQLMNDLHFSDA 422 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLA 470 LA+ LVS+ ++Y D +PW L K NP D+ V+ +R +A L+ + Sbjct: 423 LAETWKLVSQTNKYIDQTEPWNLAK-NPDDKDKLDAVMAHLAAGLRVIAELISPVMTHAP 481 Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 +IF L + ++ + + G PIFPR Sbjct: 482 KEIFAQLGITEDIDLEDLKFEDVPAGVKAVAKGTPIFPR 520 >gi|195977657|ref|YP_002122901.1| methionyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974362|gb|ACG61888.1| methionyl-tRNA synthetase MetG [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 672 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 200/522 (38%), Positives = 316/522 (60%), Gaps = 13/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + HIG AY I DVLAR+ R+ G DV + TG DEHGQKI Sbjct: 6 MTKKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGYDVFYLTGLDEHGQKIQD 65 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ AG++ + +VD + + + +LDISYD FIRTT+ H + +++++ + DIY Sbjct: 66 KAQEAGLSPQAYVDGMAEEVKALWKLLDISYDKFIRTTDDYHEEVVAAVFERLLAQDDIY 125 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + E+Y+ G+ + V+W+ EE YF RLS Y D Sbjct: 126 LGTYSGWYSVSDEEFFTESQLAEIYRDEAGKVIGGVAPSGHEVEWVSEESYFLRLSKYAD 185 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L++++++ P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWID Sbjct: 186 RLVAFFKAQPDFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWID 245 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P+++ + Sbjct: 246 ALLNYATALGYGQKDHANFDKFWSGRVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIA 305 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNVI P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 306 HGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 365 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+V+MI K +DG +P T D + V + + E + M+ Sbjct: 366 ELANDLGNLLNRTVAMINKYFDGRVPAYVKNVTAFDADLEQVVADHISEYHKQMEAVDYP 425 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +++S ++Y D PW L K + ++ ++V+ +R +A L+ F+ Sbjct: 426 RALEAVWTIISRTNKYIDETAPWVLAKAADSKEQLASVMAHLAASLRVVAHLIWPFMMTT 485 Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 + + + L + D + LD L G + +PIFPR Sbjct: 486 SAAMMEQLGL-DATYHLEELDLADLPTGVTVVAKGEPIFPRL 526 >gi|223933652|ref|ZP_03625630.1| methionyl-tRNA synthetase [Streptococcus suis 89/1591] gi|330833043|ref|YP_004401868.1| methionyl-tRNA synthetase [Streptococcus suis ST3] gi|223897682|gb|EEF64065.1| methionyl-tRNA synthetase [Streptococcus suis 89/1591] gi|329307266|gb|AEB81682.1| methionyl-tRNA synthetase [Streptococcus suis ST3] Length = 667 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 206/523 (39%), Positives = 317/523 (60%), Gaps = 21/523 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI + A+ Sbjct: 3 KTPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIEEKAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T + +VD + +++ ++LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 63 EAGLTPQAYVDGMAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122 Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + +EV++ +G+ + V W+ EE YF RLS YQDKL+ Sbjct: 123 YSGWYSVSDEEFFTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKLV 182 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++ +HP+FI P R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL Sbjct: 183 EFFNAHPDFIQPDGRMNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDALL 242 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ ++ LP + +HG+ Sbjct: 243 NYATALGYGQEETINYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDLLVAHGW 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K + G +PT A T+ D + +V + L + M+ RAL Sbjct: 363 NDLGNLLNRTVAMINKYFSGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPRAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILLQAFVPKLAN 471 V +++S ++Y D PW L K DR A+ + ++T +R +A L+Q F+ +N Sbjct: 423 EAVWNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAG-LRVVAHLIQPFMMTTSN 481 Query: 472 KIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I + L + EN F L G + PIFPR Sbjct: 482 AIMEQLGLGTAFDLENLDFAG----LPAGLTVVAKGTPIFPRL 520 >gi|220928528|ref|YP_002505437.1| methionyl-tRNA synthetase [Clostridium cellulolyticum H10] gi|219998856|gb|ACL75457.1| methionyl-tRNA synthetase [Clostridium cellulolyticum H10] Length = 654 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 196/471 (41%), Positives = 298/471 (63%), Gaps = 9/471 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++TAIAY +++PHIG+ +E+++AD ARF R+ G DV F TGTDEHGQKI A+ AG+ Sbjct: 7 YLTTAIAYTSSKPHIGNTFEIVLADSFARFKRMQGYDVRFQTGTDEHGQKIELKAKEAGI 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + K +VD ++ + + D+++ SYD FIRTT+ H + ++KK+ ++GDIYKG Y G Sbjct: 67 SPKEYVDGFAKEIQRICDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYEQGDIYKGYYEGM 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y EA++ ++ G H P + EE YF +LS Y D+L+ + HPEFI Sbjct: 127 YCTPCEAFFTSSQLVDGKCPDCGRECH-PAK---EEAYFLKLSKYADRLIQHINEHPEFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL- 245 P R+NE+++ F+ +GL+DL +SR +F WGI + D ++++YVWIDAL+NY+T G+ Sbjct: 183 QPESRKNEMMNNFLLAGLQDLCVSRTSFKWGIPVDFDDKHVVYVWIDALSNYITGLGFDA 242 Query: 246 -DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 N D KFWPADLH+IGKDILRFH IYWP L++ +PLPK+VF H ++L K+S Sbjct: 243 DGNSDEMFNKFWPADLHLIGKDILRFHTIYWPIMLMALEVPLPKQVFGHPWLLMGNGKMS 302 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNVI E+++ GVDA+RY+++ ++ DG + + +R+N+DLAN +GNLV+R Sbjct: 303 KSKGNVIYADELVDIFGVDAVRYYILHDMPFDNDGVISWELITERINSDLANVLGNLVNR 362 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 ++M K + G++ + D ++ + + + + E M + AL+++ +L Sbjct: 363 VIAMTNKYFSGVVNNSNVREDIDNELIELTLKTPETVVEKMDKLRVADALSEIFTLFKRC 422 Query: 425 DRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++Y D PW L K +A TVLY VE I A LL+AF+P+ A KI Sbjct: 423 NKYIDETMPWILAKDEAKKARLETVLYNLVEGIVTGASLLEAFMPETAQKI 473 >gi|33303701|gb|AAP22258.1| methionyl-tRNA synthetase [Bacillus cereus] Length = 397 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 183/397 (46%), Positives = 276/397 (69%), Gaps = 10/397 (2%) Query: 34 LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93 +AR+ R+ G +V + TGTDEHGQKI K A+ VT + +VD +++ + +DISYDD Sbjct: 2 MARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNVTPQAYVDNIVAGIKELWEKMDISYDD 61 Query: 94 FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND----DEVYKG---AD 146 FIRTTE RH D ++K++ D+GDIY Y GWYS++DE +Y + D + +G Sbjct: 62 FIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKVVG 121 Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLK 205 G+ + H+ V+ + EE YFFR+ Y D+LL +YE +P FI P R+NE+I+ F+K GL+ Sbjct: 122 GKSPDRGHD-VELVREESYFFRMGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLE 180 Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265 DL++SR +FDWG+++P +P++++YVW+DAL+NY+T GY + KFWPAD+H++GK Sbjct: 181 DLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGK 240 Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 +I+RFH IYWP L++ +LPLPKKVF+HG+IL K K+SKS GNV+DP+ +I+ G+DAL Sbjct: 241 EIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDAL 300 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFT 384 RY+L+RE+ G DG + +G +R+N DLAN +GNL++R+V+MI K ++G IP T Sbjct: 301 RYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYFNGEIPAFKENVT 360 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 E DE++++ L+++ E M+N AL+ + LV Sbjct: 361 EFDETLVTFAKDTLKKVEEAMENMEFSVALSSIWQLV 397 >gi|220908709|ref|YP_002484020.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7425] gi|219865320|gb|ACL45659.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7425] Length = 531 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 203/505 (40%), Positives = 297/505 (58%), Gaps = 10/505 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 + +R+ ++T + Y N PH+G AY I ADV+ARF+RL G VL TGTDEHGQKI + Sbjct: 3 INKRKTFALTTPLYYVNDLPHMGSAYTTIAADVIARFYRLQGEAVLLITGTDEHGQKIQR 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G T + DQ F ++ L+I+YD F RTT+ RH + + ++ ++GDIY Sbjct: 63 TAERLGRTPQEHCDQVVNGFVELWQKLNITYDRFSRTTDPRHAVIVQEFFHRLWERGDIY 122 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 G GWY + E + + E+ K D H +W +E+ YFFRLS YQD LL YY Sbjct: 123 LGQQQGWYCVDCEEFKEERELLK--DHYCPIHIHRQAEWRDEQNYFFRLSHYQDILLDYY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 HPEFI P RRNEV+SFV+ GLKD S+SR DWG +P DP++ +YVW DAL Y+T Sbjct: 181 NKHPEFIQPESRRNEVLSFVERGLKDFSISRVNMDWGFPVPVDPRHTLYVWFDALLGYVT 240 Query: 241 T---TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 G D + ++WP +LH+IGKDILRFH I WPA LLSA LPLP +VF HGF+ Sbjct: 241 ALLEPGEEPGLDRALQQWWPINLHLIGKDILRFHTISWPAMLLSAGLPLPDRVFVHGFLT 300 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 G+K+ KSLGN +DP+++++ G +A+RY+ ++EI G+DG + + +NADLA+ Sbjct: 301 KDGQKMGKSLGNTLDPVDLVDRFGAEAVRYYFIKEIEFGRDGDFSEPRFINILNADLADD 360 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNL++R++ M K G IPT A + +D + ++ V + + ++ +A Sbjct: 361 LGNLLNRTLKMAFKYCQGQIPTGTADSLPADHPLQALGQSVGERVAQSYAELDFTQACEI 420 Query: 417 VISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + LV + +++ D Q PW L K+ + + +LY +E +R A LL +P +A +I+ Sbjct: 421 ALELVRKGNKFVDEQAPWSLYKQGQYQQVNQILYSVLESVRLAAYLLSPIIPAIATEIYY 480 Query: 476 ILFVADENRCFQSLDQRLKPGFMLH 500 L D F D P + H Sbjct: 481 QLGFDD---SFNHQDYSTLPAYAAH 502 >gi|149195308|ref|ZP_01872396.1| methionyl-tRNA synthetase [Caminibacter mediatlanticus TB-2] gi|149134572|gb|EDM23060.1| methionyl-tRNA synthetase [Caminibacter mediatlanticus TB-2] Length = 634 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 209/515 (40%), Positives = 310/515 (60%), Gaps = 26/515 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I Y N PHIGHAY IIAD +AR+ RL G+D F TGTDEHGQKI +AA+ G Sbjct: 9 YLTTPIYYVNDVPHIGHAYTTIIADTIARYSRLKGIDTFFLTGTDEHGQKIEEAARKKGK 68 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + K + D+ S F+++ D +ISYD FIRTT++ H + + ++ KGDIYK Y G Sbjct: 69 SPKEYADEISAKFKELWDEFEISYDKFIRTTDEAHKRGVQKAFLEMYKKGDIYKDYYEGH 128 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E++ ++ + + P + ++EE YFFRLS YQDK+L + ++ I Sbjct: 129 YCVSCESFIAPSQL---VNDELCPDCGKPTRIIKEESYFFRLSKYQDKILDWLKNKKP-I 184 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244 LP + NEVI FV+ GLKDLS++R +F+WG+K+PD D ++++YVW+DAL NYLT GY Sbjct: 185 LPEAKANEVIRFVEEGLKDLSITRTSFEWGVKLPDEINDKKHVVYVWLDALFNYLTALGY 244 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + K+WPA LH++GKDIL+FHA+YWPAFL+S LPKK+ +HG+ GEK+S Sbjct: 245 GSEDESLVKKYWPAKLHIVGKDILKFHAVYWPAFLMSIGYELPKKIAAHGWWTRDGEKMS 304 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNVIDP EV + G++ RYFL+RE+ G DG + + L R+N DL N +GNL++R Sbjct: 305 KSKGNVIDPKEVADAYGIENFRYFLLREVPFGADGDFSEKALIDRINNDLGNDLGNLLNR 364 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--------QLIHRALAQ 416 + M K +DG + + + S L E RE ++N IH+ L + Sbjct: 365 IIGMAYKYFDGKV--------TSRDVEKYFSSELNEAREIIKNLEETYLWKMQIHKFLEE 416 Query: 417 VISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + ++S ++ D KPWEL K +A+ ++ + ++ +I L A +PK KI Sbjct: 417 LWKVLSIGNKAIDTYKPWELMKNGETQKAAALIGLIANLLALTSINLHAVMPKTTQKIAS 476 Query: 476 IL-FVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 L F + N + ++ +L F++ K P+FP+ Sbjct: 477 SLGFEINPNSFNELMEGKLLDDFVIEK-IPPLFPK 510 >gi|269216114|ref|ZP_06159968.1| methionine--tRNA ligase [Slackia exigua ATCC 700122] gi|269130373|gb|EEZ61451.1| methionine--tRNA ligase [Slackia exigua ATCC 700122] Length = 526 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 205/514 (39%), Positives = 294/514 (57%), Gaps = 14/514 (2%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 +T I Y NA PH+G AY + AD +AR+ R++G DV F TG DEHGQK+A+ A+ G+T Sbjct: 8 FTTPIYYVNAAPHLGTAYTTVAADAVARYQRMNGHDVAFVTGLDEHGQKVAETAEKHGMT 67 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + + D F D +LDI++ DF+RT+ R T + W + +KG +YKG Y GWY Sbjct: 68 PQEWCDSMVPAFMDAWKMLDIAFTDFVRTSSDRQTRTVQTFWNDLYEKGYLYKGAYEGWY 127 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWME--EEGYFFRLSAYQDKLLSYYESHPE 185 + +E YY + ++ G + PV+ M EE +FF+LS +QD+LL +YE+HP+ Sbjct: 128 CVHEETYYAESDLETDDAGAFICPDCKRPVRRMSSGEENWFFKLSEFQDRLLEFYEAHPD 187 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RRNEV++FVK GL+DLS+SR TFDWGI + D ++ YVW DAL YLT GY Sbjct: 188 FIRPETRRNEVVAFVKGGLQDLSISRSTFDWGIPLTFDEGHVCYVWADALLAYLTGIGYA 247 Query: 246 DNPD--GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 D PD G WP H +GKDI RFH + WPA L++A LP+ VF HGF++ GEK+ Sbjct: 248 D-PDRPGEFDARWPMQYHFVGKDITRFHCVIWPAMLMAAGLPVTHTVFGHGFLMVGGEKM 306 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GN I P +++ G DA RY+ + ++ G DG + + + NADLAN GNL S Sbjct: 307 SKSKGNGIRPADLVSVYGSDAYRYYFLSDVRFGADGNVSVERMTQVYNADLANTWGNLCS 366 Query: 364 RSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R +M+ K +DG +P P FT + + + + + M + A A V L S Sbjct: 367 RVFNMVGKYFDGTVPQVPSGFTHVENPLRDIADGLYETFDSCMADVNFTDACAAVQELAS 426 Query: 423 EVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V+ Y + PW L K+ + VLY +E R LA+ F+P+ + ++F L + Sbjct: 427 RVNLYVEQSAPWNLAKSEETAGELAFVLYNALEACRILALYFAPFMPRTSAEVFRRLGLG 486 Query: 481 D----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 D ++ + +L G + K DP+FPR Sbjct: 487 DIAAVDDIEAATAWGQLPAGNEVEKG-DPLFPRL 519 >gi|170079299|ref|YP_001735937.1| methionyl-tRNA synthetase [Synechococcus sp. PCC 7002] gi|169886968|gb|ACB00682.1| methionyl-tRNA synthetase [Synechococcus sp. PCC 7002] Length = 530 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 204/490 (41%), Positives = 284/490 (57%), Gaps = 8/490 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + ++T + Y N PHIG AY ++AD +ARFHRL G DVLF TGTDEHGQKI + Sbjct: 1 MTSPVRFALTTPLYYVNDVPHIGSAYTTMVADAIARFHRLKGDDVLFITGTDEHGQKIQR 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ GV +V D+ +F+D+ +I YD F RTT H ++++ D GDIY Sbjct: 61 TAQEKGVDPQVHCDEIIGSFKDLWQHYNIQYDRFSRTTAPNHAKIVAEFFQRVWDNGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 GWY + E + + ++ K + + +W +EE YFFRLS YQ +L + Y Sbjct: 121 LAQQQGWYCVACEEFKEEKDLIKDHHCAIHTNKQ--AEWRDEENYFFRLSKYQAQLEALY 178 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 +P+FI P RRNEVI+FVK GL+D S+SR DWG +P D + +YVW DAL Y+T Sbjct: 179 SDNPDFIQPASRRNEVINFVKQGLQDFSISRVNLDWGFPVPTDENHTIYVWFDALLGYVT 238 Query: 241 TT---GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 G + + K+WP +LH+IGKDILRFHA+YWPA L+SANLPLP KVF HGF+ Sbjct: 239 ALLEDGEAATLENALKKWWPINLHLIGKDILRFHAVYWPAMLMSANLPLPDKVFGHGFLT 298 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 G K+ KSLGN IDPI ++ + G DALRY+ ++E+ GKDG +++ VNADLAN Sbjct: 299 KNGLKMGKSLGNTIDPIALVNQYGADALRYYFLKEVELGKDGDFNETRFVNVVNADLAND 358 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQ 416 +GNL++R++ M+ K IP T + L L + + L A Q Sbjct: 359 LGNLLNRTLGMLKKYCKSEIPNLDLGTIPVDHPLKALGETLGDRTCAAYDNLNFTAACQQ 418 Query: 417 VISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 V++L+ ++Y D + PW L K + +L +E +R A LL +P L+N+I+ Sbjct: 419 VLALIQASNKYIDDRAPWALFKAGEQAQVEEILLTILESVRLAAYLLSPVIPNLSNQIYR 478 Query: 476 IL-FVADENR 484 L F D NR Sbjct: 479 QLGFPGDFNR 488 >gi|168702118|ref|ZP_02734395.1| Methionyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246] Length = 531 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 192/477 (40%), Positives = 306/477 (64%), Gaps = 7/477 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ + + +TAI YPN++PHIG A+E + ADV AR+ R++G DV F G DE+ K+A Sbjct: 1 MTDKPRWFQTTAIDYPNSRPHIGTAFEKLGADVQARYRRMEGYDVFFLMGNDENTLKVAD 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A++ G + + D +R FR++ D LDISYD F++T+ +RH CR +K+ D G IY Sbjct: 61 RAKSLGQEPQAYCDDMARQFREVWDALDISYDTFVQTSHERHKQCCRKFVQKVYDNGYIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y GWY E + D+V+ + G N + P+ E +FF+LSA++D+LL + Sbjct: 121 KGSYEGWYCPGCEEF-KSDKVHAESGGLCPNHKR-PLVRRSEPCWFFKLSAFKDRLLEHL 178 Query: 181 ESHPEFILPIERRNEVISFVKS-GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 + +PEF+ P RRNE+I F+++ GL+DL++SR +WGIK+P DP++ +YVW DAL Y+ Sbjct: 179 KGNPEFVQPESRRNEMIGFIEAEGLQDLNISRHGEEWGIKLPFDPEFTIYVWFDALLTYI 238 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T GY D+ + + K WPAD+H IGKDI RFH WPA L +A P+KVFSHGF+ + Sbjct: 239 TGIGYGDD-EATFRKHWPADVHFIGKDITRFHTHIWPAMLWAAGEEAPRKVFSHGFVNNN 297 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G+K+ K+LGN++DP+E+I + DA RY+ +RE DG Y ++ N++LAN +G Sbjct: 298 GQKMGKTLGNIVDPMEIIAKSNADAYRYYFMRECPFPSDGDYSGQRYEEVYNSELANNLG 357 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV-LQEIRENMQNQLIHRALAQVI 418 N++SR +++ K+++G+ T A D + + ++ + E+RE+++ + AL +++ Sbjct: 358 NMLSRELTITFKNFEGVF-TGTAGVTPDPVVPGLDLKLFVGEVREHVEACRYNLALQKIV 416 Query: 419 S-LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 ++ ++Y +A PW+L KT+ D A VL+ V+ +R +ILL+ F+PK A I+ Sbjct: 417 QDFLTPTNQYLEANAPWKLVKTDKDAAKKVLFNAVQSLRIASILLKPFIPKSAEAIY 473 >gi|323342276|ref|ZP_08082508.1| methionine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463388|gb|EFY08582.1| methionine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 644 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 196/495 (39%), Positives = 312/495 (63%), Gaps = 15/495 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 MK + YI+TAIAY +A+PHIG+ YE+++AD +ARF R G +V F TGTDEHGQKI Sbjct: 1 MKNNKNYYITTAIAYTSAKPHIGNIYEIVLADSIARFKRAQGYNVRFQTGTDEHGQKIED 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ + K +VD S R + D++++ YD FIRTT+ H + + ++KK+ D+GD+Y Sbjct: 61 NAKEHNMLPKDYVDNISGVIRGLFDLMNVKYDYFIRTTDDYHKEQVQKVFKKLFDQGDLY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y GWY E++Y+D +V + + V +E YFF++S YQ++L+ Y Sbjct: 121 KGNYEGWYCKSCESFYSDSQV----EDETCPECGGKVVRQQESCYFFKMSNYQERLVQYI 176 Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 + +P FI P R+NE++ +F+K L DL++SR +F WGI + DP++++YVWIDAL NY+ Sbjct: 177 KDNPSFIQPESRKNEMLQNFLKEDLYDLAVSRTSFKWGIPVDFDPEHVVYVWIDALINYI 236 Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 T GY + DG+ +FWPAD+H+IGKDILRFH IYWP L++ ++ LPK++F H + Sbjct: 237 TGLGY--DVDGNNGPLFDEFWPADVHLIGKDILRFHTIYWPILLMALDIELPKQIFGHPW 294 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L K+SKS GN + ++ +GVD +RY ++ E+ +DG + + +R+N DLA Sbjct: 295 LLTGDSKMSKSKGNAVYVDDLTSVLGVDPVRYIMLHEMPFERDGHLTYELMIERINTDLA 354 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N IGNLV+R++SM K +DG++ + D+ +++ C ++ + M + A++ Sbjct: 355 NIIGNLVNRTISMTNKYFDGVLTVNHVDDDMDDELIAACKNLIPNVEAKMDTLHVADAIS 414 Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++++L + ++Y D +PW L K T +R TVLY E+IR I L++F+P+ + +I Sbjct: 415 EIVALFRKGNKYIDDTQPWVLAKDETKQERLQTVLYNLTELIRIGGIALESFIPETSQRI 474 Query: 474 FDILFVADENRCFQS 488 L E+ F+S Sbjct: 475 LAQL--QTEHTSFES 487 >gi|302336214|ref|YP_003801421.1| methionyl-tRNA synthetase [Olsenella uli DSM 7084] gi|301320054|gb|ADK68541.1| methionyl-tRNA synthetase [Olsenella uli DSM 7084] Length = 534 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 197/497 (39%), Positives = 295/497 (59%), Gaps = 18/497 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + +I+T I Y NA+PH+G AY ++ DV AR+ R GLDV F TG DEHG+K+ +AA+ Sbjct: 3 KTPFFITTPIYYVNARPHLGTAYTTVLCDVQARYRRATGLDVRFLTGMDEHGEKVEEAAR 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 + G+ + + D + F D+ L+IS DDFIRTTE R + LW+++ + G +YKG Sbjct: 63 SHGMDPQEWCDSQAPFFEDLWQTLEISNDDFIRTTEARQTRAVQYLWERMRESGYLYKGT 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH------NPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY + DE Y+ + +V + + QH P++ ++EE YFFRLSA+QD+LL Sbjct: 123 YDGWYCVPDETYFTETQVSHADEERGTQGQHLCPDCGRPLERVQEESYFFRLSAFQDRLL 182 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237 Y+ HP+F++P R EV SFV+ GL+DLS+SR +FDWGI +P D +++ YVW DAL N Sbjct: 183 RLYDEHPDFVMPDFRMREVRSFVEGGLQDLSVSRTSFDWGIPVPFDDRHVTYVWFDALLN 242 Query: 238 YLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 Y+T G+ D + A+F WPA H++GKDI+RFH + WPA L++ LP+ VF+HG Sbjct: 243 YMTAVGFGQGTDEAAAEFARRWPAQYHMVGKDIIRFHCVIWPAMLMAIGEALPEHVFAHG 302 Query: 295 FILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348 F++ K GEK+SKS GN I P EVI+ +GV+ RY+ + + G+DG +++ Sbjct: 303 FLMVKNEETGQGEKMSKSRGNAIAPEEVIDLLGVEGYRYYFMTDCVPGEDGAISFSRMEQ 362 Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQN 407 NADLAN GNLVSRS++M K +DG P ++E + + + E+M Sbjct: 363 VYNADLANSWGNLVSRSLNMSAKYFDGKTPQLADGWSERPNPLCDIAQGIFGRYAEHMDK 422 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAF 465 A V+ LV + Y + PW + K R + ++ +E IR A LL F Sbjct: 423 IEYVAAKDVVMELVHAANHYIEDSAPWTVAKDPARREELAGIICSLLESIRICAHLLSPF 482 Query: 466 VPKLANKIFDILFVADE 482 +P+ + ++ + + DE Sbjct: 483 MPQTSAEVLRRMSLGDE 499 >gi|94987979|ref|YP_596080.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|94991861|ref|YP_599960.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS2096] gi|94541487|gb|ABF31536.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|94545369|gb|ABF35416.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA [Streptococcus pyogenes MGAS2096] Length = 666 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 198/518 (38%), Positives = 314/518 (60%), Gaps = 11/518 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI A+ Sbjct: 3 KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T + +VD +++ + + +LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 63 EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + EV++ DGQ + V+W+ EE YF RLS Y D+L+ Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++++ P+FI P +R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL Sbjct: 183 AFFKERPDFIQPDDRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P ++ +HG+ Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D+LRY+L+R + G DG + + R+N +LA Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDSLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K +DG +P T D + + L + ++M+ RAL Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 V ++++ ++Y D PW L K + D+A ++V+ +R +A ++Q F+ + + Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482 Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I L +A + + PIFPR Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520 >gi|258614579|ref|ZP_05712349.1| methionyl-tRNA synthetase [Enterococcus faecium DO] Length = 413 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 184/402 (45%), Positives = 269/402 (66%), Gaps = 7/402 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+E YI+T I YP+ + HIG++Y I D +AR+ RL G DV + TG DEHGQKI Sbjct: 1 MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIET 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GV + +VD+ + + + + LDISYD FIRTT+ H + ++ ++ ++GDIY Sbjct: 61 KAEELGVKPQEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS+ DE ++ + EVYK +G + + V+ ++EE YFFR+S Y D Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +LL YYE HPEFI P R+NE+I+ F+K GL+DL++SR TF WG+ + DP++++YVWID Sbjct: 181 RLLEYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL+NY+T GY + K+WPAD+ ++GK+I+RFH IYWP L++ +LPLPKKVF H Sbjct: 241 ALSNYITALGYGSEDESLFEKYWPADVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + RVN D Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAVPFGSDGVFTPEDFVSRVNYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 LAN +GNL++R+++MI K DG++P + +S LS + Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASLVTPFDSELSTTA 402 >gi|222823730|ref|YP_002575304.1| methionyl-tRNA synthetase [Campylobacter lari RM2100] gi|222538952|gb|ACM64053.1| methionyl-tRNA synthetase [Campylobacter lari RM2100] Length = 629 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 207/491 (42%), Positives = 300/491 (61%), Gaps = 21/491 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N HIGHAY IIAD LARF+RL G F TGTDEHGQKI +AA Sbjct: 3 YITTPIYYVNDVAHIGHAYTTIIADTLARFYRLQGEKTFFLTGTDEHGQKIEQAASAKNF 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K + D+ S F+ + D +ISYD FIRTT++ H + + +KK+ DKGDIYKG Y G+ Sbjct: 63 TPKEYADEISTKFKKLWDEFEISYDYFIRTTDENHKLSVQKAFKKMFDKGDIYKGTYEGF 122 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYES 182 Y + E+Y+ Q N H P Q ++EE YFF+LS YQD++L +Y+ Sbjct: 123 YCVSCESYF--------TQTQLINECHCPDCGKKTQLLKEESYFFKLSKYQDQILKWYKE 174 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYL 239 E ILP + NE+I+FV+SGLKDLS++R +F+WGIK+P +D ++++YVW+DAL NY+ Sbjct: 175 K-EPILPKNKANELINFVESGLKDLSITRTSFEWGIKLPKELNDDKHVVYVWLDALMNYV 233 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 + G+ + D + FWPA +H +GKDILRFHA+YWPAFL+S +LPLPK + +HG+ Sbjct: 234 SALGWGN--DEANMDFWPAHIHFVGKDILRFHAVYWPAFLMSLDLPLPKFIAAHGWWTKD 291 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 GEK+SKS GNV+ P EV + G++A RYFL+RE+ G DG + + L R+NA+L+N +G Sbjct: 292 GEKMSKSKGNVVAPKEVADTFGLEAFRYFLLREVPFGNDGDFSQKALIARINAELSNELG 351 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL++R + M K +I ++ L+ C L ++N +R L ++ Sbjct: 352 NLLNRIIGMSAKYSQNIIDCKDVNLYFNQE-LNECKEYLDNAINALENIQPNRYLEELFK 410 Query: 420 LVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 +S + +PW L K + +A+ ++ + ++ ++AILL A +P A KI L Sbjct: 411 ALSLANLSISKYEPWNLIKNDQMQKANALVALCANILAKVAILLSAAMPNTALKIAKALN 470 Query: 479 VADENRCFQSL 489 N +Q L Sbjct: 471 FEISNENYQKL 481 >gi|329115819|ref|ZP_08244536.1| methionine--tRNA ligase [Streptococcus parauberis NCFD 2020] gi|326906224|gb|EGE53138.1| methionine--tRNA ligase [Streptococcus parauberis NCFD 2020] Length = 668 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 198/525 (37%), Positives = 317/525 (60%), Gaps = 19/525 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + HIG AY I DVLAR+ RL +V + TG DEHGQKI Sbjct: 1 MTDKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMNHEVFYLTGLDEHGQKIQT 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H + +++K+ + DIY Sbjct: 61 KAEEAGITPQAYVDGMAEGVKELWSLLDISYDKFIRTTDSYHEEVVAAVFEKLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + +EV++ G + V+W+ EE YF RL Y D Sbjct: 121 LGQYSGWYSVSDEEFFTESQLEEVFRDESGNVTGGIAPSGHEVEWVSEESYFLRLGKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L++++ HPEFI P R NE++ +F++ GL+DL++SR TF WG+++P +P++++YVWID Sbjct: 181 RLVAFFNEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVQVPSNPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + KFW + H++GKDILRFH+IYWP L+ ++PLP+++ + Sbjct: 241 ALLNYATALGYGQENHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDMPLPERLIA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+++MI K + G +P+ TE D + + + + + M Sbjct: 361 ELANDLGNLLNRTIAMINKYFGGQVPSYVENVTEFDLDLAYLVEEKIADYHKQMDAVDYP 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469 RAL V S++S ++Y D PW L K + D+ ++V+ +R +A L+Q F+ + Sbjct: 421 RALDAVWSIISRANKYIDETAPWVLAKEDGDKEQLASVMAHLAASLRVVAHLIQPFMIET 480 Query: 470 ANKIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 +N I L ++ EN ++ + ++ + PIFPR Sbjct: 481 SNAIMTQLGLSIDFDLENLTLANMPENIQ----VITKGQPIFPRL 521 >gi|325695003|gb|EGD36907.1| methionine--tRNA ligase [Streptococcus sanguinis SK150] Length = 664 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 198/521 (38%), Positives = 316/521 (60%), Gaps = 12/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG++ + +V+ + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGISPQAYVNGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ +G+ + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVIYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSM+ K +DG IP T+ D ++ V ++ + + +M Sbjct: 360 ELANDLGNLLNRTVSMVNKYFDGQIPVYEENVTDFDGALAQVAAQSIADYYRHMDAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V L+S ++Y D PW L K ++ ++V+ +R +A +++ F+ + Sbjct: 420 RALEAVWMLISRTNKYIDETAPWVLAKDEALRNQLASVMSHLAASLRVVAHMIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L + +L G + + PIFPR Sbjct: 480 SKAVLSQLGLPQATSLENLAIDQLPAGLTVVEKGTPIFPRL 520 >gi|322392166|ref|ZP_08065628.1| methionine--tRNA ligase [Streptococcus peroris ATCC 700780] gi|321145066|gb|EFX40465.1| methionine--tRNA ligase [Streptococcus peroris ATCC 700780] Length = 665 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 205/525 (39%), Positives = 315/525 (60%), Gaps = 20/525 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQIFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+++P +P++++YVW D Sbjct: 180 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVQVPSNPRHVVYVWFD 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY+T GY + KFW + H++GKDILRFH+IYWP L+ ++ LP+++ Sbjct: 240 ALLNYVTALGYGQEDHENFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIG 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNVI P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVIYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP T+ D + V + + + M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTDFDNELAQVAEQSISDYHTYMEAVNYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ +R +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510 + + L +A+ SL+ F + T PIFPR Sbjct: 480 SRAVLTQLGLAE----VSSLENLSLADFPANVTVVAKGTPIFPRL 520 >gi|289167689|ref|YP_003445958.1| methionyl-tRNA synthetase [Streptococcus mitis B6] gi|288907256|emb|CBJ22091.1| methionyl-tRNA synthetase [Streptococcus mitis B6] Length = 665 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 202/522 (38%), Positives = 317/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVW D Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWFD 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY+T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP+++ + Sbjct: 240 ALLNYVTALGYDQDEHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP T+ D ++ V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTDFDNALAQVAAESIADYHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ +R +A L++ F+ + Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L + +E ++L P + PIFPR Sbjct: 480 SRAVLTQLGL-EEVASLENLKLADFPADVTVVAKGTPIFPRL 520 >gi|282863863|ref|ZP_06272921.1| methionyl-tRNA synthetase [Streptomyces sp. ACTE] gi|282561564|gb|EFB67108.1| methionyl-tRNA synthetase [Streptomyces sp. ACTE] Length = 534 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 197/477 (41%), Positives = 292/477 (61%), Gaps = 8/477 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y+ST I Y N PH+GHAY + DVL R+HR G V + TGTDEHGQKI + A+ V Sbjct: 15 YVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANDV 74 Query: 68 TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + + D+ ++ + + L+I+ DDFIRTTEKRH D + + + DK IYKG Y G Sbjct: 75 TPQAWCDKLVEEAWKPLWEHLNIANDDFIRTTEKRHTDRVQEFVQDLYDKDQIYKGGYEG 134 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 Y + E Y ++ + DG H PV+ ++EE YFF+LS Y KLL +YE++P Sbjct: 135 PYCVGCEEYKLPGDLIEAEDGTKLCPIHKKPVEILKEENYFFKLSEYGPKLLEFYEANPG 194 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RNE+++FVK GL+DLS+SR TFDWG+ +P DP++++YVWIDAL NY T GY Sbjct: 195 FIQPESARNEIVNFVKQGLQDLSISRSTFDWGVPVPWDPKHVIYVWIDALLNYATAVGYG 254 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 N + + F PAD+H+IGKDILRFH++ WPA L++ LPLP KV ++G+++ GEK+SK Sbjct: 255 ANQEKFDSTF-PADVHLIGKDILRFHSVIWPAMLMAQGLPLPGKVVANGWLMVGGEKMSK 313 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S I P ++ GVDA R++ +R IA G DG + + R ++LAN GNL SR Sbjct: 314 SNLTGIKPQDLTSHFGVDAYRWYFLRAIAYGSDGSFSWEDFSARYTSELANDYGNLASRL 373 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424 +M+ K + G +P A E+++++ +R + E + +L + + V +V Sbjct: 374 AAMVGKYFGGALPEATAAGEAEQAVREGLARAVATADEKIGEELDFQGGILAIFDFVKQV 433 Query: 425 DRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + Y Q+PW++ K R +T+LY E +R +A+LL A +P+ + K+++ L Sbjct: 434 NGYITEQEPWKVAKDESSEGQARLATILYTAAEALRGVAVLLNAVMPETSQKLWESL 490 >gi|302552805|ref|ZP_07305147.1| methionyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] gi|302470423|gb|EFL33516.1| methionyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] Length = 538 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 207/524 (39%), Positives = 316/524 (60%), Gaps = 27/524 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y+ST I Y N PH+GHAY + DVL R+HR G V + TGTDEHGQKI + A+ GV Sbjct: 15 YVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANGV 74 Query: 68 TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + + + D+ + ++ + + L+I+ DDFIRTT+KRH D + + + DKG+IYKG Y G Sbjct: 75 SPQEWADKLVTEAWKPLWEHLEIANDDFIRTTQKRHTDRVQEFVQDLYDKGEIYKGGYEG 134 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y + E Y E+ G +G+Y + PV+ + EE YFF+LS Y DKLL++YE Sbjct: 135 PYCVGCEEYKLPGELLDG-EGEYAGQKLCPIHKKPVEILSEENYFFKLSEYGDKLLAHYE 193 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 ++P FI P RNEV++FV+ GL+DLS+SR TFDWG+ +P D ++++YVW+DAL NY T Sbjct: 194 ANPGFIQPESARNEVVNFVRQGLQDLSISRSTFDWGVPVPWDAKHVIYVWVDALLNYATA 253 Query: 242 TGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 GY +N +AKF +PAD+H++GKDILRFHA+ WPA L++ LPLP K+ ++G+++ Sbjct: 254 VGYNEN----QAKFEETFPADVHLVGKDILRFHAVIWPAMLMAQGLPLPGKIAANGWLMV 309 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 GEK+SKS I P ++ GVDA R++ +R IA G+DG + + R ++LAN Sbjct: 310 GGEKMSKSNLTGIKPQDLTTHFGVDAYRWYFLRAIAFGQDGSFSWEDFSARYTSELANDY 369 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417 GNL SR +M+ K + G +P A E++++I ++ + E + + L + + Sbjct: 370 GNLASRVAAMVGKYFGGELPESTADGEAEKAIHEGLAKAVAEADRRIGDDLDFQGGILAI 429 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 V +V+ Y Q+PW++ K + R +T+LY E +R +A+LL +P+ + K+ Sbjct: 430 FDFVKQVNGYITEQEPWKVAKDTSEEGKARLATILYTAAESLRAIAVLLNPVMPETSQKL 489 Query: 474 FDIL-------FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 +D L +AD+ + RL G + K +FPR Sbjct: 490 WDSLGAEASLGALADQTVQQSAEWGRLPAGTTVTKG-AVLFPRL 532 >gi|297193195|ref|ZP_06910593.1| methionyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] gi|197720465|gb|EDY64373.1| methionyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] Length = 525 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 199/478 (41%), Positives = 299/478 (62%), Gaps = 14/478 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y+ST I Y N PH+GHAY + DVL R+HR G V + TGTDEHGQKI + A+ GV Sbjct: 5 YVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANGV 64 Query: 68 TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + + D+ ++ + + L+I+ DDFIRTTEKRH D + + + DKG+IYKG Y G Sbjct: 65 TPQEWCDKLVEEAWKPLWEHLNIANDDFIRTTEKRHTDRVQEFVQDLYDKGEIYKGGYEG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 Y + E Y ++ + DG H PV+ ++EE YFF+LS Y KLL +Y ++P+ Sbjct: 125 PYCVGCEEYKLPGDLIEAEDGTKLCPIHKKPVEILKEENYFFKLSEYGPKLLDFYAANPD 184 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RNEV++FVK GL+DLS+SR TFDWG+ +P D ++++YVWIDAL NY T GY Sbjct: 185 FIQPESARNEVVNFVKQGLQDLSISRSTFDWGVPVPWDEKHVIYVWIDALLNYATAVGYG 244 Query: 246 DNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 N +AKF +PA++H++GKDILRFHAI WPA L++ LP+P KV ++G+++ GEK Sbjct: 245 SN----QAKFDETFPANVHLVGKDILRFHAIIWPAMLMAQGLPVPGKVAANGWLMVGGEK 300 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS I P ++ GVDA R++ +R IA G+DG + + R ++LAN GNL Sbjct: 301 MSKSNLTGIKPQDLTSHFGVDAYRWYFLRAIAFGQDGSFSWEDFTARYTSELANDYGNLA 360 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLV 421 SR +M+ K ++G +P A E+++++ ++ + E + +L + V V Sbjct: 361 SRVAAMVGKYFEGALPAATAAGEAEQAVQDGLAKAVAEADRKIGEELDFQSGILSVFEFV 420 Query: 422 SEVDRYFDAQKPWELKKTN-PD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 +V+ Y Q+PW++ K + P+ R +T+LY E +R +A+LL +P+ + K++D Sbjct: 421 KQVNGYITEQEPWKVAKDDSPEGRARLATILYTAAESLRAVAVLLNPVMPETSQKLWD 478 >gi|254457829|ref|ZP_05071256.1| methionyl-tRNA synthetase [Campylobacterales bacterium GD 1] gi|207085222|gb|EDZ62507.1| methionyl-tRNA synthetase [Campylobacterales bacterium GD 1] Length = 652 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 205/508 (40%), Positives = 303/508 (59%), Gaps = 13/508 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N + HIGHAY IAD + R+ +L G F TGTDEHGQKI ++AQ G Sbjct: 4 YITTPIYYVNGEAHIGHAYTTFIADTMTRYEKLKGNYTYFLTGTDEHGQKIEESAQKHGK 63 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T+ F D+ S F+D+ D +I YD FIRTT+ H + ++ + KGDIYK Y G Sbjct: 64 PTQEFADEISATFKDLWDEFEIGYDKFIRTTDADHKLGVQKAFEVMYAKGDIYKDFYEGH 123 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E ++ + ++ DG++ ++EE YFF+LS Y+D LL +YE +P+FI Sbjct: 124 YCVSCETFFPETQLI---DGEFCPDCGRTTSVVKEESYFFKLSKYEDALLRHYEDNPDFI 180 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244 LP R NEV +FVK GL+DLS++R +F WG+K+P+ D +++MYVW+DAL NY+T GY Sbjct: 181 LPRSRANEVKNFVKGGLRDLSVTRTSFTWGVKLPESMNDDKHVMYVWLDALMNYITALGY 240 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D + FWPA + ++GKDILRFHAIYWPAFL+S +LPLPK + +HG+ GEK+S Sbjct: 241 --GKDDANMDFWPASMQLVGKDILRFHAIYWPAFLMSLDLPLPKHIGAHGWWTRDGEKMS 298 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNVI P EV + GV+ LRYF++RE+ G+DG + + R+N++L+N +GNL++R Sbjct: 299 KSKGNVISPKEVSDAYGVENLRYFMLREVPFGQDGDFSQRAFIDRINSELSNDLGNLLNR 358 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + M K D I + + L + L + MQN HR L ++ L + Sbjct: 359 IIGMSEKYSDFEIDSVDV-EKYHAKELEAMNEALGNLDGFMQNMQTHRYLEELWKLFAIG 417 Query: 425 DRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 ++ + PW ++K+ D A + + ++ + +I+L +P+ I D L +N Sbjct: 418 NKAIEEHAPWVKIKEGKKDEALATVALVANILAKASIMLSPVMPRTTATIADALNFTIDN 477 Query: 484 RCFQSL--DQRLKPGFMLHKTFDPIFPR 509 F L D++L F + K P+FPR Sbjct: 478 ASFNELVIDKKLLKLFNIKKV-PPLFPR 504 >gi|116333117|ref|YP_794644.1| methyonyl-tRNA synthetase [Lactobacillus brevis ATCC 367] gi|116098464|gb|ABJ63613.1| methionyl-tRNA synthetase [Lactobacillus brevis ATCC 367] Length = 677 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 203/521 (38%), Positives = 305/521 (58%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ YI+T I YP+ + HIG++Y I D +AR+ R +G DV F TGTDEHG KI Sbjct: 1 MADKPSFYITTPIYYPSGRLHIGNSYTTIACDTVARYKRSNGYDVFFLTGTDEHGLKIED 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ T + +VD + + + L+IS D FIRTT+ H + ++ ++ +GDIY Sbjct: 61 KAKAQNQTPQEYVDGMATGIKQLWKTLEISNDKFIRTTDHEHVAAVQAIFDRLLKQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174 G Y GWYS DE Y+ + + VY+ ADG+ Q + V ++E+ YFF++S Y D Sbjct: 121 LGEYEGWYSEDDEEYFTETQLAKVYRDADGKMIGGQAPSGHDVSLVKEQSYFFKMSKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 LL +Y SHP FI P R E+I+ F+K GL+DL++SR TF WG+ + DP++++YVWID Sbjct: 181 WLLDFYHSHPHFIQPESRMTEMINNFIKPGLEDLAVSRTTFSWGVPVKSDPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T GY + DG KFWPAD+ ++GK+I+RFH+IYWP L + L +PK++F+H Sbjct: 241 ALLNYITALGYTSDDDGLFKKFWPADVQMVGKEIVRFHSIYWPIVLHALGLEMPKELFAH 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G++L K K+SKS GNVI P +++ G+DALRY+L+R + G DG + + R+N D Sbjct: 301 GWLLMKDGKMSKSKGNVIYPETLVDRYGLDALRYYLMRAMPYGNDGVFSPEDFVDRLNYD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K G +P TE D + + + V+ + M Sbjct: 361 LANDLGNLLNRTVAMINKYEGGQLPQYQAGVTEFDADLEATAAAVITNYHDLMNQMHFAD 420 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 ALA++ LV+ ++Y D +PW+L K + + V+ +R +A L+ + Sbjct: 421 ALAEIWKLVARSNKYIDETEPWKLAKDDSKATELAAVMAHLAASLRVIATLISPVMTHAP 480 Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 +IFD L + L L G + PIFPR Sbjct: 481 KEIFDQLGLDVATLTMTDLALADLPAGKQVVAKGTPIFPRI 521 >gi|125718503|ref|YP_001035636.1| methionyl-tRNA synthetase [Streptococcus sanguinis SK36] gi|125498420|gb|ABN45086.1| Methionyl-tRNA synthetase, putative [Streptococcus sanguinis SK36] Length = 666 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 198/522 (37%), Positives = 312/522 (59%), Gaps = 12/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + HIG+A I DVLAR+ RL G DV + TG DEHGQKI Sbjct: 1 MTEKQSFYITTPIYYPSGKLHIGNATTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQA 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG++ + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 61 KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ +G+ + V+W+ EE YF RLS YQD Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 181 RLVEFFKSHPDFITPNGRLNEMLKNFIEPGLEDLAVSRTTFTWGVAVPSNPKHVIYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL--HVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291 AL NY T GY + + KFW H++ KDILRFH+IYWP L+ ++ LP ++ Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNNGTVYHMVAKDILRFHSIYWPILLMMLDIKLPDRLI 300 Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 +HG+ + K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + R+N Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRIN 360 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLI 410 +LAN +GNL++R+VSMI K +DG +PT T+ D ++ V S + + ++M Sbjct: 361 YELANDLGNLLNRTVSMINKYFDGQVPTYEENVTDFDGALAQVASESIADYYKHMDAVDY 420 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPK 468 RAL V +L+S ++Y D PW L K + V+ + +A +++ F+ + Sbjct: 421 PRALEAVWTLISRTNKYIDETAPWVLAKDEAKVKELAAVMSHLAASLCVVAHMIEPFMME 480 Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L + +L G + + PIFPR Sbjct: 481 TSKAVLSQLGLPQATSLENLAIDQLPAGLTVVEKGTPIFPRL 522 >gi|298492950|ref|YP_003723127.1| methionyl-tRNA synthetase ['Nostoc azollae' 0708] gi|298234868|gb|ADI66004.1| methionyl-tRNA synthetase ['Nostoc azollae' 0708] Length = 533 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 194/484 (40%), Positives = 292/484 (60%), Gaps = 13/484 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K + ++T + Y N PHIG AY + ADV+ARF R G VL TGTDEHGQKI ++ Sbjct: 6 KTSKTFALTTPLYYVNDVPHIGSAYTTMAADVVARFQRSLGHQVLLVTGTDEHGQKIQRS 65 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A + + F DQ +F ++ +VL+I YD F RTT H+ + ++++ + GDIY+ Sbjct: 66 AASLEKPPQEFCDQIVPSFINLWEVLNIQYDRFSRTTALNHYAIVKEFFQRVWENGDIYQ 125 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 G GWY + E + + E+ G + ++ V+W +E+ YFFRLS YQ KL +Y+ Sbjct: 126 GQQKGWYCVSCEEFKEERELLDGKRCPIHTSKE--VEWRDEQNYFFRLSKYQTKLEEFYQ 183 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 S P+FI P RRNEV++FV GL+D S+SR DWG + DP++ +YVW DAL Y+T Sbjct: 184 SSPDFIQPPSRRNEVLNFVGQGLQDFSISRVNLDWGFPVSVDPKHTLYVWFDALLGYVTA 243 Query: 242 TGYLDNPDGSKA------KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 L PD K+WP +LH+IGKDILRFHA+YWPA L+SA LPLP++VF HGF Sbjct: 244 ---LLEPDAEATLANALEKWWPINLHLIGKDILRFHAVYWPAMLMSAGLPLPERVFGHGF 300 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + G+K+ K+LGN +DPI +++ G DA+RY+ ++EI GKDG +++ +NADLA Sbjct: 301 LTKDGQKMGKTLGNTLDPISLVQRYGSDAVRYYFLKEIEFGKDGDFNETRFINVLNADLA 360 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL-QEIRENMQNQLIHRAL 414 N +GNL++R+++M+ K G +P+ +E+ L L +++++ + A Sbjct: 361 NDLGNLLNRTLNMVKKYSTGKVPSIDPEAIPNENALKAIGLGLGEQVKQAYTALAFNEAC 420 Query: 415 AQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 V+SLV +++ D Q PW L K+ + VLY +E +R A LL +P +++ I Sbjct: 421 HSVLSLVQASNKFIDEQAPWSLYKQGKQEEVEVVLYTVLESVRLAAYLLSPIIPNISSDI 480 Query: 474 FDIL 477 + L Sbjct: 481 YQQL 484 >gi|28896469|ref|NP_802819.1| methionyl-tRNA synthetase [Streptococcus pyogenes SSI-1] gi|28811720|dbj|BAC64652.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes SSI-1] Length = 666 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 199/518 (38%), Positives = 312/518 (60%), Gaps = 11/518 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI A+ Sbjct: 3 KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T + +VD +++ + + +LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 63 EAGITPQTYVDNMAKDVKALWQLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + EV++ DGQ + V+W+ EE YF RLS Y D+L+ Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++++ P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P ++ +HG+ Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K +DG +P T D + V L + ++M+ RAL Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQVIDAQLADYHKHMEAVDYPRAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 V ++++ ++Y D PW L K + D+A ++V+ +R +A ++Q F+ + + Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482 Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I L +A + + PIFPR Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520 >gi|322386045|ref|ZP_08059684.1| methionine--tRNA ligase [Streptococcus cristatus ATCC 51100] gi|321269889|gb|EFX52810.1| methionine--tRNA ligase [Streptococcus cristatus ATCC 51100] Length = 665 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 197/521 (37%), Positives = 312/521 (59%), Gaps = 11/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MTTKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG++ + +VD + +++ +LDISYD FIRTT+ H +++K+ + DIY Sbjct: 61 KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFEKLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G Y+GWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 121 LGEYAGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++S P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVW D Sbjct: 181 RLVEFFKSQPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPRHVVYVWFD 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY+T GY + G+ KFW + H++GKDILRFH+IYWP L+ ++ LP+++ Sbjct: 241 ALLNYVTALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPVLLMMLDVKLPERLIG 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+DALRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG +P T+ D ++ V ++ + + ++M Sbjct: 361 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGALAQVAAQSITDYYKHMDAVDYP 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K + V+ +R +A +++ F+ + Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDEAKVKELAAVMSHLAASLRVVAHMIEPFMMET 480 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L + +L G + PIFPR Sbjct: 481 SKAVLSQLGLPQAVSLENLAIDQLPAGLTVVDKGTPIFPRL 521 >gi|237752716|ref|ZP_04583196.1| methionyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430] gi|229376205|gb|EEO26296.1| methionyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430] Length = 657 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 211/499 (42%), Positives = 314/499 (62%), Gaps = 28/499 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI++ I Y N PHIGHAY II D LARFHRL G V TGTDEHGQKI ++A+ Sbjct: 4 KFYITSPIYYVNDIPHIGHAYTTIIVDTLARFHRLKGNSVFCLTGTDEHGQKIEQSAKKM 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G K +VD S+ F+D+ D DI+YD FIRTT+ H + + ++ K+ +KGDIYKG Y Sbjct: 64 GQDPKNYVDSISKRFKDLWDSFDIAYDYFIRTTDSTHLQSAQYVFLKMYEKGDIYKGEYE 123 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYY 180 G Y + E+++ A Q + ++ P ++EE YFF+LSAY ++LL +Y Sbjct: 124 GNYCISCESFF--------AKSQLMSEKNCPDCGKETTLLQEESYFFKLSAYAERLLKFY 175 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------DDPQYIMYVWI 232 + +P+FILP RRNEVISFVKSGL+DLS++R +FDWGIK+P ++ +++MYVW+ Sbjct: 176 DENPDFILPKSRRNEVISFVKSGLEDLSITRTSFDWGIKLPKELLENNPNNQKHVMYVWL 235 Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 DAL NYL+ G+ N +K FWPA+ H++GKDILRFHAIYWPAFL+S +LPLPK + + Sbjct: 236 DALVNYLSALGF-HNDLPNKMDFWPANFHIVGKDILRFHAIYWPAFLMSLDLPLPKHIAA 294 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ G K+SKS+GNV++P EV++ G+D RYF++RE+ G+DG + + L +R+NA Sbjct: 295 HGWWTKDGAKMSKSIGNVVNPKEVVDAYGLDTFRYFILREVPFGQDGDFSQSALIERINA 354 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQL 409 DL N +GNL++R + M K ++ + + +S DE L +L+ + ++ Sbjct: 355 DLGNDLGNLLNRLLGMGAKYFNNKLKADLSELKSTYCDE--LVQIQTILESLESHINEVQ 412 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPK 468 I+R L ++ L S + ++PW+L K N + +L + ++ + A+ L +PK Sbjct: 413 INRYLEELWKLFSLGNGIIAKKEPWQLIKDNKHTEVAQLLLLLANILLKAALFLSPCMPK 472 Query: 469 LANKIFDILFVADENRCFQ 487 A+KI + + CF+ Sbjct: 473 SADKILKVFGLNANTECFK 491 >gi|326201023|ref|ZP_08190895.1| methionyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] gi|325988591|gb|EGD49415.1| methionyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] Length = 654 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 205/513 (39%), Positives = 314/513 (61%), Gaps = 19/513 (3%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++TAIAY +++PHIG+ +E+++AD ARF R+ G DV F TGTDEHGQKI A+ G+ Sbjct: 7 YLTTAIAYTSSKPHIGNTFEIVLADSFARFKRMQGYDVRFQTGTDEHGQKIELKAKEVGI 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + K +VD + + + D+++ +YD FIRTT++ H + ++KK+ ++GDIYKG Y G Sbjct: 67 SPKEYVDNFAVEIKRICDLMNTTYDKFIRTTDEYHEKQVQKIFKKLYEQGDIYKGHYEGM 126 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y EA++ ++ G H P + EE YF +LS Y D+L+ + HPEFI Sbjct: 127 YCTPCEAFFTPSQLVDGKCPDCGRECH-PAK---EEAYFLKLSKYADRLIQHINEHPEFI 182 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-L 245 P R+NE+++ F+ GL+DL +SR +F WGI + D ++++YVW+DAL+NY+T G+ + Sbjct: 183 QPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALSNYITGLGFDV 242 Query: 246 D-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D N D K+WPAD+H+IGKDILRFH IYWP L++ +PLPK+VF H ++L K+S Sbjct: 243 DGNNDEKFNKYWPADMHLIGKDILRFHTIYWPIMLMAMEVPLPKQVFGHPWLLMGNGKMS 302 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNVI E+++ GVDA+RY+++ E+ DG + + +R+N+DLAN +GNLV+R Sbjct: 303 KSKGNVIYADELVDIFGVDAVRYYVLHEMPFDNDGVISWELITERINSDLANVLGNLVNR 362 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 ++M K + G++ E D ++ + + + + E M + AL+++ SL Sbjct: 363 VIAMSNKYFSGVVNNSNVREEIDNELIELTLKTPETVVEKMDKLRVADALSEIFSLFKRC 422 Query: 425 DRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++Y D PW L K R TVLY VE I A LL+AF+P+ A KI VA Sbjct: 423 NKYIDETMPWILAKDEDKKPRLETVLYNLVESIVTGASLLEAFMPETAQKI-----VAQL 477 Query: 483 NRCFQSLDQ-----RLKPGFMLHKTFDPIFPRF 510 N +SL+ + K G + +T + +F R Sbjct: 478 NTSIRSLEDMKVYGQYKSGAKVTETPEILFLRL 510 >gi|21909836|ref|NP_664104.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS315] gi|25009347|sp|P59080|SYM_STRP3 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|21904022|gb|AAM78907.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes MGAS315] Length = 665 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 199/518 (38%), Positives = 312/518 (60%), Gaps = 11/518 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI A+ Sbjct: 2 KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T + +VD +++ + + +LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 62 EAGITPQTYVDNMAKDVKALWQLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 121 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + EV++ DGQ + V+W+ EE YF RLS Y D+L+ Sbjct: 122 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 181 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++++ P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL Sbjct: 182 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 241 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P ++ +HG+ Sbjct: 242 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 302 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K +DG +P T D + V L + ++M+ RAL Sbjct: 362 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQVIDAQLADYHKHMEAVDYPRAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 V ++++ ++Y D PW L K + D+A ++V+ +R +A ++Q F+ + + Sbjct: 422 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 481 Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I L +A + + PIFPR Sbjct: 482 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 519 >gi|323359386|ref|YP_004225782.1| methionyl-tRNA synthetase [Microbacterium testaceum StLB037] gi|323275757|dbj|BAJ75902.1| methionyl-tRNA synthetase [Microbacterium testaceum StLB037] Length = 524 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 206/523 (39%), Positives = 306/523 (58%), Gaps = 17/523 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M YI+T I YP+ PHIGH Y + D LAR+HR G D TGTDEHGQK+ + Sbjct: 1 MTSGRSFYITTPIYYPSDVPHIGHGYTTVAVDTLARWHRQAGDDTWMLTGTDEHGQKMMR 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AA G T + +VD+ ++ + LD++ DDFIRT++ RH + + + D+G I Sbjct: 61 AAAANGATPQEWVDKLVGESWFPLLKTLDVANDDFIRTSQPRHEERVAKFVQALYDRGYI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHN-PVQWMEEEGYFFRLSAYQDK 175 Y G + Y + E + + E+ G +G A H+ P++ ++E+ YFF+LS +Q+ Sbjct: 121 YAGEFEALYCVGCEEFKTEAEIVDGEGPFEGLKVCAIHSKPLELLQEKNYFFKLSEFQEP 180 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 LL Y++ P+F+ P RNEV+SFVK+GLKDLS+SR TFDWGI++P D +++YVW+DAL Sbjct: 181 LLELYKTVPDFVRPESARNEVVSFVKNGLKDLSISRSTFDWGIQVPWDEAHVIYVWVDAL 240 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY +P+ A+ WPA HV+GKDILRFHA+ WPA L++A L +P+ VF+HG+ Sbjct: 241 LNYATAIGYGTDPE-EFARRWPA-YHVVGKDILRFHAVIWPAMLMAAGLEVPRGVFAHGW 298 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L GEK+SKS I P E+ + G DA R++ + IA G+DG + + L R A+LA Sbjct: 299 LLVGGEKMSKSKLTGIAPTEITDVFGSDAYRFYFLSAIAFGQDGSFSWEDLSARYQAELA 358 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 NG GNL SR+++MI + ++G++P G TE D +I + ++ I A+A Sbjct: 359 NGFGNLASRTIAMIERYFEGIVPPSGELTEIDLAIQRTVADAATNADAAIEKFRIDEAIA 418 Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + ++V ++ Y +PW L K +R TVLY E +R LA+LL +P K+ Sbjct: 419 AIWTIVDALNGYITDNEPWALAKGPEKRERLGTVLYTAAEGLRALAVLLSPVMPIATEKL 478 Query: 474 FDILFVADENRCFQSLDQR-------LKPGFMLHKTFDPIFPR 509 + L A+ R L+PG ++ P+FPR Sbjct: 479 WIALGAAESIGRLHDQPLREAGEWGALRPGSSVNG-LSPLFPR 520 >gi|306825043|ref|ZP_07458385.1| methionine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432479|gb|EFM35453.1| methionine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 679 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 201/521 (38%), Positives = 312/521 (59%), Gaps = 12/521 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV TG DEHGQKI + Sbjct: 15 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFCLTGLDEHGQKIQQ 73 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 74 KAEEAGITPQAYVDGMAAGVKELWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQD Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGIVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 194 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP+++ + Sbjct: 254 ALLNYATALGYGQDDHTNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIA 313 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 373 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG +P TE D ++ V + + + +M+ Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGKVPAYVEGVTEFDNALAQVAEQSISDYHTHMEAVDYP 433 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ + +A L++ F+ Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLHIVAHLIEPFMMGT 493 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + L +A+ + G + PIFPR Sbjct: 494 SQAVLTQLGLAEVSSLENLSLADFPAGVTVVAKGTPIFPRL 534 >gi|85057769|ref|YP_456685.1| methionyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma AYWB] gi|84789874|gb|ABC65606.1| methiony-tRNA synthetase [Aster yellows witches'-broom phytoplasma AYWB] Length = 520 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 210/498 (42%), Positives = 307/498 (61%), Gaps = 20/498 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K++ K ++STAIAY + PHIG+ YE I+AD +ARF RL+G DV F TGTDEHGQKIA Sbjct: 6 KQKPKFFLSTAIAYASGIPHIGNVYECILADAIARFKRLEGFDVFFQTGTDEHGQKIAAK 65 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + G + +VDQ S + + D++ +SYD F++TT H T + ++ K+ KGDIY Sbjct: 66 SLQQGKNPQEYVDQISLEIKRIYDLMQVSYDKFVKTTNPNHKQTVQAIFDKLWKKGDIYL 125 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 G Y G YS+ +E+Y ++ DG+ N + P+ + EE YFF++S YQ LL Y E Sbjct: 126 GKYQGLYSVSEESYVAPKDL---IDGKTSNGEI-PI-LISEETYFFKISKYQSHLLKYLE 180 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 ++P I P +R E+++ +K L DLS+SR +F WGI++P DP++++YVWIDAL+NYLT Sbjct: 181 NNPSLIKPDAQRKELLNLLKEPLSDLSVSRTSFKWGIRVPFDPKHVIYVWIDALSNYLTG 240 Query: 242 TGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 GY NP ++F WP D+HVIGKDILRFH IYWP L++ + LPK+ +H +IL Sbjct: 241 LGY--NPTSENSQFNRYWPCDMHVIGKDILRFHLIYWPILLMALEISLPKQFLTHPWILF 298 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K+SKS GNV+ ++++ VD++RYF++ EI +DG + L +R N+DLAN + Sbjct: 299 DKNKMSKSKGNVLYVDDLLKHFPVDSIRYFVLSEIPYAQDGNITYELLVERHNSDLANVL 358 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ---EIRENMQNQLIHRALA 415 GNLV R MI K Y + T + + + + L +R MQ+ + AL Sbjct: 359 GNLVHRVFGMI-KIYRQNNLSKTLITSNLDPKFDLSKQTLATLPSVRLKMQDYKVGDALK 417 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTV---LYVTVEVIRQLAILLQAFVPKLANK 472 ++I+L ++Y D +PW L K NP++ + LY VE +R L +LLQ F+P+ ANK Sbjct: 418 KIINLARFANKYIDLVEPWNLFK-NPEKQQLLDHTLYSLVEALRFLGVLLQPFLPQTANK 476 Query: 473 IFDILFVADENRCFQSLD 490 I L +D F+SLD Sbjct: 477 ILTQLKASD--ITFKSLD 492 >gi|320547307|ref|ZP_08041598.1| methionine--tRNA ligase [Streptococcus equinus ATCC 9812] gi|320448005|gb|EFW88757.1| methionine--tRNA ligase [Streptococcus equinus ATCC 9812] Length = 666 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 200/525 (38%), Positives = 312/525 (59%), Gaps = 19/525 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ YI+T I YP+ + HIG AY I DVLAR+ R+ DV + TG DEHGQKI + Sbjct: 1 MTSKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + + + + +LDISYD FIRTT+ H +++K+ + DIY Sbjct: 61 KAEEAGITPQAYVDGMAADVKKLWKMLDISYDKFIRTTDDYHEKVVAEVFEKLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + +EV++ +G+ + V+W+ EE YF RL Y D Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++ +HP+FI P R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID Sbjct: 181 RLVEFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + KFW + H++GKDILRFH+IYWP L+ ++ LP+++ + Sbjct: 241 ALLNYATALGYGQEDHANFDKFWNGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPERLIA 300 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+V+MI K + G +P TE D + ++ + + E + M Sbjct: 361 ELANDLGNLLNRTVAMINKYFGGEVPAYVENVTEFDADLAALVAEKITEYHKQMNAVDYP 420 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V S++S ++Y D PW L K D + V+ +R +A L+Q F+ Sbjct: 421 RALDAVWSIISRTNKYIDETAPWVLAKDEAKRDELAAVMAHLAASLRVVAHLIQPFMMTT 480 Query: 470 ANKIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 +N I + L + EN + +K + PIFPR Sbjct: 481 SNAIMEQLGLGANFDLENLALSGFPEGVK----VVAKGTPIFPRL 521 >gi|301109886|ref|XP_002904023.1| methionyl-tRNA synthetase, putative [Phytophthora infestans T30-4] gi|262096149|gb|EEY54201.1| methionyl-tRNA synthetase, putative [Phytophthora infestans T30-4] Length = 727 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 199/499 (39%), Positives = 305/499 (61%), Gaps = 23/499 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE Y++TAI Y N PH+GHAYE + +DV+ R+HR+ G DV F TGTDEHGQKIA+ A+ Sbjct: 39 RETFYLTTAIHYTNGLPHMGHAYENVCSDVICRYHRVFGRDVYFLTGTDEHGQKIAQTAE 98 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AGVT + VD+ + F+ + L++S ++FIRTT H + L+++ DKGD+Y G Sbjct: 99 AAGVTPQQLVDKYAGIFQQLTKDLNMSNNNFIRTTSDVHKKFAQWLFQQALDKGDVYLGT 158 Query: 124 YSGWYSLRDEAYYNDDEV----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 Y GWY++R+E + + E YK + M+E+ YFF++S YQD+L+ + Sbjct: 159 YEGWYNVREEMFVTETEAQLTDYKDP------TTGTSFKKMQEQSYFFKMSKYQDRLVKH 212 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 E +P+F+ P RR E++ +K L+DLS SR TF G+ I +DP++++YVW DAL NYL Sbjct: 213 IEENPDFLQPEVRRQELLRRLKEPLQDLSASRNTFAHGVPILNDPKHVLYVWFDALANYL 272 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 + GY PDG +A++WPA++H+IGKDI FH + WP L+S +PLPK+VF+HGF+ K Sbjct: 273 SAIGY---PDGPEARYWPANVHIIGKDITWFHCVIWPCILMSTGIPLPKRVFAHGFVNAK 329 Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 G K+SKS+GNVIDP +IE G+++ RYF+VR G+D + +D L N++LA+ + Sbjct: 330 DGSKMSKSVGNVIDPYAMIERYGLESFRYFIVRSAKFGQDMPFSEDDLINIHNSELADTL 389 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNLV R+V++ K +G++P A D +L+ ++ ++ + A ++ Sbjct: 390 GNLVHRTVNICKKYSNGVVPLAKADKPFD------IYELLKYSEDSYKDFSLQNACIAIV 443 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 + + + ++Y ++PW +K+ P V+ +E I LA L A +P+ A IFD L Sbjct: 444 NTLKDTNKYLTEKEPWHMKENEPRL--VVVRTCLEAIYVLAHYLSAIIPQTAQIIFDKLG 501 Query: 479 VADENRCFQSLD-QRLKPG 496 S + LKPG Sbjct: 502 TPPTTLTALSPEYDNLKPG 520 >gi|306827914|ref|ZP_07461181.1| methionine--tRNA ligase [Streptococcus pyogenes ATCC 10782] gi|304429833|gb|EFM32875.1| methionine--tRNA ligase [Streptococcus pyogenes ATCC 10782] Length = 666 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 197/518 (38%), Positives = 313/518 (60%), Gaps = 11/518 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI A+ Sbjct: 3 KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T + +VD +++ + + +LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 63 EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + EV++ DGQ + V+W+ EE YF RLS Y D+L+ Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++++ P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P+++ +HG+ Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIAHGW 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K +DG +P T D + + L + ++M+ RAL Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 + ++++ ++Y D PW L K + D+A ++V+ +R +A ++Q F+ + + Sbjct: 423 EAIWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482 Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I L +A + + PIFPR Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520 >gi|85859641|ref|YP_461843.1| methionyl-tRNA synthetase [Syntrophus aciditrophicus SB] gi|85722732|gb|ABC77675.1| methionyl-tRNA synthetase / protein secretion chaperonin [Syntrophus aciditrophicus SB] Length = 644 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 209/514 (40%), Positives = 310/514 (60%), Gaps = 20/514 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+T I Y NA PHIGHAY I+ADVLAR+HRL G F TGTDEHG KIA+AA+ Sbjct: 13 KTFYITTPIYYVNASPHIGHAYTTIVADVLARYHRLSGHRTFFLTGTDEHGDKIAEAAEK 72 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ K + D+ S FR++ L +S D FIRTT+ H T + + K+ + GDIY G Y Sbjct: 73 NGISPKAYADRISSQFRNLWPELSVSNDYFIRTTDANHIATVQAILSKVYEAGDIYFGHY 132 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G+Y + E +Y + E+ DG+ + Q P ++ +E YFF++S YQD L+S+ +++P Sbjct: 133 EGFYCVGCERFYTEKEL---IDGKCPDHQMEP-EFRKESNYFFKMSKYQDWLISHIKANP 188 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 +FI P RNEV++F++ L+DL +SR WGI +P D Y+ YVW DAL NY+T Sbjct: 189 DFIRPERYRNEVLAFLREPLEDLCISRPKSRLAWGISLPFDANYVTYVWFDALINYITGL 248 Query: 243 GYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY PDG FWP H+I KDIL+ H IYWP L +A + + + HG+ Sbjct: 249 GY---PDGENFHTFWPVAQHLIAKDILKPHGIYWPTMLKAAGIEPYRHLNVHGYWNVDQS 305 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNVI P+++ ++ G+DA RY+L+RE+ G D + ++G +RVNADLAN +GNL Sbjct: 306 KMSKSLGNVIRPLDLKDKYGLDAFRYYLLREMVFGLDSSFSEEGFVQRVNADLANDLGNL 365 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 VSR +M +K G + P A +E+D + S RV+QE+ + + H+AL + L+ Sbjct: 366 VSRVTAMAVKYCKGSV--PAASSEADTILSSTAVRVIQEVEASFRELTFHKALMSIWDLI 423 Query: 422 SEVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + +RY ++PW L K ++ + V+Y +E +R +++L+ F+P + KI L + Sbjct: 424 NTANRYIVEKEPWNLAKDPANQGTLDDVIYSLLETLRIVSVLIAPFMPGSSVKIMTSLGI 483 Query: 480 ADENRCFQSLDQ-RLKPGFMLHKTF---DPIFPR 509 A N Q+ D R G +T + +FPR Sbjct: 484 A--NPELQNFDMIRTWGGLAAGQTLERGEALFPR 515 >gi|50913716|ref|YP_059688.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10394] gi|50902790|gb|AAT86505.1| Methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10394] Length = 666 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 198/518 (38%), Positives = 312/518 (60%), Gaps = 11/518 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI A+ Sbjct: 3 KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T + +VD +++ + + +LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 63 EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + EV++ DGQ + V+W+ EE YF RLS Y D+L+ Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++++ P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P ++ +HG+ Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K +DG +P T D + + L + ++M+ RAL Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 V ++++ ++Y D PW L K + D+A ++V+ +R +A ++Q F+ + + Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482 Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I L +A + + PIFPR Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520 >gi|78777263|ref|YP_393578.1| methionyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251] gi|78497803|gb|ABB44343.1| methionyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251] Length = 644 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 202/507 (39%), Positives = 306/507 (60%), Gaps = 11/507 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N + HIGHAY IAD LAR+ +L G D F TGTDEHGQKI ++AQ Sbjct: 4 YITTPIYYVNGEAHIGHAYTTFIADTLARYEKLKGEDTYFLTGTDEHGQKIEESAQKNSK 63 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T+ F D+ S +F+++ D DISYD FIRTT+ H + ++ + KGDIYK Y G Sbjct: 64 PTQEFADEISASFKNLWDEFDISYDKFIRTTDAEHKKGVQRAFEVMYAKGDIYKDFYEGH 123 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E ++ + ++ DG++ ++EE YFFRLS Y++ LL +YE +P+FI Sbjct: 124 YCVSCETFFTETQL---VDGEFCPDCGRSTNIVKEESYFFRLSKYENALLKHYEENPDFI 180 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244 LP R NEVI+FVK GL+DLS++R +F WG+ +P+ D +++MYVW+DAL NY+T GY Sbjct: 181 LPRSRANEVINFVKGGLRDLSVTRTSFTWGVGMPNSIKDDKHVMYVWLDALMNYITALGY 240 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + ++WPA + +GKDILRFHAIYWPAFL+S +LPLP+ + +HG+ GEK+S Sbjct: 241 GTTEEN--MRYWPASVQFVGKDILRFHAIYWPAFLMSIDLPLPQHIGAHGWWTRDGEKMS 298 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNVI P +V + GV+ LRYF++RE+ G+DG + + R+N++L+N +GNL++R Sbjct: 299 KSKGNVISPKQVADVYGVENLRYFMLREVPFGQDGDFSQRAFIDRINSELSNDLGNLLNR 358 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + M K D I + + I + VL + M+N HR L ++ L S Sbjct: 359 IIGMSGKYSDFEIESVNVLKYHKKEI-DAMNVVLDSLDIFMKNFQTHRYLEELWKLFSIG 417 Query: 425 DRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 ++ + PW ++K D A + + + ++ + +I+L +P+ + I D L + + Sbjct: 418 NKAIEEHAPWVKMKDGKKDEALSTVALVANILAKASIMLHPVMPRTTDIIADALNFSISH 477 Query: 484 RCFQSLDQRLKPGFMLH-KTFDPIFPR 509 ++ L Q K + + K P+FPR Sbjct: 478 ESYRELVQEKKLLKLFNIKPVPPLFPR 504 >gi|256545789|ref|ZP_05473145.1| methionine--tRNA ligase [Anaerococcus vaginalis ATCC 51170] gi|256398485|gb|EEU12106.1| methionine--tRNA ligase [Anaerococcus vaginalis ATCC 51170] Length = 646 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 208/489 (42%), Positives = 304/489 (62%), Gaps = 11/489 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ YI+T I YPN+ HIG+ Y +IADVL R+ L G D TTGTDEHGQKI AA Sbjct: 2 DKNAYYITTPIYYPNSNLHIGNVYTSVIADVLKRYKALRGFDAYLTTGTDEHGQKIMNAA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + G + FVD+ + + + LDI YD FIR+T+ +H + + +++ + DKGDIYKG Sbjct: 62 LSHGSKPQEFVDRIAGETKVLLKKLDIDYDSFIRSTDPKHEENVKNIFQYLYDKGDIYKG 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G+Y E+Y+ + ++ DG + V +EE YFFRLS Y DKL ++ Sbjct: 122 HYDGYYCESCESYFTESQL---DDGNCPDCGRG-VNHRKEESYFFRLSNYTDKLKELFKD 177 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HPEF+ P R+NE+++ F+ GL+DLS+SR TFDWG+ +P D ++++YVWIDAL+ YLT Sbjct: 178 HPEFLEPKFRQNEMLNNFIDKGLEDLSVSRNTFDWGVDVPFDNEHVVYVWIDALSCYLTA 237 Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY D K K+WPA +H+IGKDI+RFH I WPA L++ ++PLPKKVF+HG+IL Sbjct: 238 IGY--GYDMEKFNKYWPAGVHLIGKDIVRFHTIIWPALLMALDIPLPKKVFAHGWILFDN 295 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKS GN++ P ++E G D+L+YFL+RE G DG + R N+DL N +GN Sbjct: 296 DKMSKSKGNIMYPEPLVELYGTDSLKYFLLREFNFGADGNFLSKKFMDRYNSDLVNDLGN 355 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+SR+VSMI K DG+I E D ++++ + ++ + M + AL + +L Sbjct: 356 LLSRTVSMISKYNDGIIKKGLEEDEIDGELIALAEKTYEDFTKLMDEFKFNEALECLWNL 415 Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 V ++Y D +PW L ++ N DR +TVLY E +R +A +L + +I L V Sbjct: 416 VRRSNKYVDQTEPWILGREENYDRLNTVLYNLAESLRIIAQMLGPVMRNTTEEILRQLGV 475 Query: 480 ADENRCFQS 488 EN+ F+S Sbjct: 476 --ENQGFES 482 >gi|139474323|ref|YP_001129039.1| methionyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo] gi|73919759|sp|Q5XDK8|SYM_STRP6 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|134272570|emb|CAM30836.1| methionyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo] Length = 665 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 198/518 (38%), Positives = 312/518 (60%), Gaps = 11/518 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI A+ Sbjct: 2 KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T + +VD +++ + + +LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 62 EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 121 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + EV++ DGQ + V+W+ EE YF RLS Y D+L+ Sbjct: 122 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 181 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++++ P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL Sbjct: 182 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 241 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P ++ +HG+ Sbjct: 242 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 302 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K +DG +P T D + + L + ++M+ RAL Sbjct: 362 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 V ++++ ++Y D PW L K + D+A ++V+ +R +A ++Q F+ + + Sbjct: 422 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 481 Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I L +A + + PIFPR Sbjct: 482 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 519 >gi|17227729|ref|NP_484277.1| methionyl-tRNA synthetase [Nostoc sp. PCC 7120] gi|25009375|sp|Q8Z068|SYM_ANASP RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|17135211|dbj|BAB77757.1| methionyl-tRNA synthetase [Nostoc sp. PCC 7120] Length = 530 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 197/485 (40%), Positives = 295/485 (60%), Gaps = 15/485 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K + ++T + Y N PHIG AY + AD +ARF +L G DVL TGTDEHGQKI ++ Sbjct: 6 KAEKTFALTTPLYYVNDVPHIGSAYTTMAADAVARFQKLLGRDVLLITGTDEHGQKIQRS 65 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A++ G + F D+ +F + +L+I YD F RTT RH + ++ + GDIY+ Sbjct: 66 AESLGKAPQEFCDEIVPSFMSLWRLLNIQYDRFSRTTAVRHKAIVDEFFARVWEAGDIYQ 125 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 G GWY + E + + E+ +G + + V+W +E+ YFFRLS YQ +L +Y+ Sbjct: 126 GQQKGWYCVSCEEFKEERELLEGNRCPIH--VNKEVEWRDEQNYFFRLSKYQTQLEEFYQ 183 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 SHP+FI P RRNEV++FV GL+D S+SR DWG +P+DP++ +YVW DAL Y+T Sbjct: 184 SHPDFIQPESRRNEVLNFVSQGLQDFSISRVNLDWGFPVPNDPKHTLYVWFDALLAYVT- 242 Query: 242 TGYLDNPD-----GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 LD D + K+WP +LH+IGKDILRFHA+YWPA LLSA LPLP +VF HGF+ Sbjct: 243 -ALLDPEDEPTLENALGKWWPINLHLIGKDILRFHAVYWPAMLLSAGLPLPDRVFGHGFL 301 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 G+K+ KSLGN +DP+ ++++ G DA+RY+ ++EI GKDG +++ +NADLAN Sbjct: 302 TKDGQKMGKSLGNTVDPVGLVQQYGSDAVRYYFLKEIEFGKDGDFNEVRFIHVLNADLAN 361 Query: 357 GIGNLVSRSVSMILK---DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 +GNL++R+++M+ K +Y I E+ L V + ++++ + ++A Sbjct: 362 DLGNLLNRTLNMVKKYCANYALSITNEDIPAENTLKALGV--DLGAKVKQAYEVLAFNQA 419 Query: 414 LAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 V+SLV +++ D Q PW L K+ TVLY +E +R A LL +P +++ Sbjct: 420 CGVVLSLVQASNKFIDDQAPWSLYKQERQQEVETVLYTVLESVRLAAYLLSPVIPNISSN 479 Query: 473 IFDIL 477 I+ L Sbjct: 480 IYQQL 484 >gi|126656215|ref|ZP_01727599.1| methionyl-tRNA synthetase [Cyanothece sp. CCY0110] gi|126622495|gb|EAZ93201.1| methionyl-tRNA synthetase [Cyanothece sp. CCY0110] Length = 535 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 194/492 (39%), Positives = 297/492 (60%), Gaps = 14/492 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K+ +K ++T + Y N PHIG AY IIADV+AR+ RL G +VL TGTDEHGQKI + Sbjct: 6 KKPKKFALTTPLYYVNGVPHIGSAYTTIIADVIARYKRLIGEEVLLITGTDEHGQKIQRT 65 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 AQ G+ + DQ +F+ + LDI YD F RTT +H + + ++ + GDIY Sbjct: 66 AQEKGLLPQDHCDQIVGSFKQLWQKLDIQYDRFSRTTATKHEAIVKEFFGRVWENGDIYL 125 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 GWY ++ E + E+ + DG + +W +EE YFF+LS YQ KL Y Sbjct: 126 AQQQGWYCVQCEEFKEKRELLE--DGCCPLHPNKKAEWRDEENYFFKLSKYQSKLEELYA 183 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +P+FI P RRNE+++F+ GL+D S+SR +WG IP DP + +YVW DAL Y+T Sbjct: 184 KNPQFIEPESRRNEILNFMNQGLQDFSISRVNLEWGFPIPKDPNHTIYVWFDALLGYVTA 243 Query: 242 TGYLDNP------DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 L P D + +++WP +LH+IGKDILRFHAIYWPA L+SANLPLP+++F HGF Sbjct: 244 ---LLEPEEEPTLDNALSEWWPINLHLIGKDILRFHAIYWPAMLMSANLPLPEQIFGHGF 300 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + G+K+ KSLGN +DP +++++ G D++RY+ ++EI CGKDG +++ +NADLA Sbjct: 301 LTKDGQKMGKSLGNTLDPFDLVDKYGSDSVRYYFLKEIECGKDGDFNETRFVNILNADLA 360 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R++ M K G +P A D + ++ + +++ + + + Sbjct: 361 NDLGNLLNRTLGMTQKYCQGSLPEITASELPQDHPLKTIGLSLGEKVIKAYEKLKFNEGC 420 Query: 415 AQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++++L+ +++ D Q PW L K+ +LY +E +R A LL +P L++KI Sbjct: 421 EEILTLIQAGNKFIDEQAPWRLFKEGKQAEVEKILYGVLESVRLAAYLLAPIIPNLSSKI 480 Query: 474 FDIL-FVADENR 484 ++ L F D N+ Sbjct: 481 YEQLGFSVDFNQ 492 >gi|94993743|ref|YP_601841.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10750] gi|94547251|gb|ABF37297.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA [Streptococcus pyogenes MGAS10750] Length = 666 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 197/518 (38%), Positives = 312/518 (60%), Gaps = 11/518 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI A+ Sbjct: 3 KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T + +VD +++ + + +LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 63 EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + EV++ DGQ + V+W+ EE YF RLS Y D+L+ Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++++ P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P ++ +HG+ Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K +DG +P T D + + L + ++M+ RAL Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 + ++++ ++Y D PW L K + D+A ++V+ +R +A ++Q F+ + + Sbjct: 423 EAIWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482 Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I L +A + + PIFPR Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520 >gi|302388627|ref|YP_003824448.1| methionyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] gi|302199255|gb|ADL06825.1| methionyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] Length = 644 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 221/521 (42%), Positives = 310/521 (59%), Gaps = 22/521 (4%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 MK+R YI+T I Y NAQPHIGHAY I+AD LAR+HRL G D F TGTDEHG+KIA+ Sbjct: 1 MKDR-IFYITTPIYYVNAQPHIGHAYTTIVADFLARWHRLAGYDTFFLTGTDEHGEKIAQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AAQ G + FVD+ S FR+ + L I YDDFIRTT++RH + + +K+ D GDIY Sbjct: 60 AAQKNGEEPQAFVDRVSARFREAWEKLCIEYDDFIRTTDERHKKVVQYVLQKVYDAGDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG-YFFRLSAYQDKLLSY 179 G Y G Y + E + + E+ G H V EG YFFR+ Y++ L Y Sbjct: 120 YGEYEGLYCVGCERFLTEKELVDGR-----CPDHGTVPERRREGNYFFRMEKYREWLRDY 174 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLS--RKTFDWGIKIPDDPQYIMYVWIDALTN 237 +++P+FI P RNEV+S + + DLS+S R+ WGI +P D ++ YVW DAL N Sbjct: 175 IQANPDFIRPEGYRNEVLSMLSEPVGDLSISRPRQRVPWGIPLPWDEDHVTYVWFDALLN 234 Query: 238 YLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 Y++ GY PDG K +FW H++GKDIL+ HA++WP L SA +PL + + GF+ Sbjct: 235 YVSALGY---PDGEKYHRFWTHAWHLVGKDILKPHAVFWPTMLKSAGIPLYRHLNVGGFL 291 Query: 297 LHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 L G K+SKSLGNV+DP + E+ G D +RY+L+RE+ G+DG + GL +R NADLA Sbjct: 292 LGPDGRKMSKSLGNVVDPFALAEKYGPDVVRYYLLRELPYGQDGAVGEPGLVERYNADLA 351 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414 N +GNL+SR+V+MI K Y G IP PG +E + L + L + EN+ N L I AL Sbjct: 352 NDLGNLLSRTVTMIEKFYSGYIPAPG-LSEGPDHELIALAEGLPDRLENLINGLEITEAL 410 Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 ++ + ++Y D PW L K +R +TV+Y E +R +++ + +P + + Sbjct: 411 KEIWKFIGRANKYIDETAPWTLAKDPAKKERLATVIYNLAEALRIISVHISPVMPNTSGE 470 Query: 473 IFDILFVADENR-CFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 I L +ADE ++S+ + RL G + IFPR Sbjct: 471 IRRQLGIADEGLFTWESVRKWGRLPAGLKIGGK-RIIFPRI 510 >gi|222152637|ref|YP_002561812.1| methionyl-tRNA synthetase [Streptococcus uberis 0140J] gi|222113448|emb|CAR41140.1| methionyl-tRNA synthetase [Streptococcus uberis 0140J] Length = 668 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 199/529 (37%), Positives = 316/529 (59%), Gaps = 26/529 (4%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I YP+ + HIG AY I DVLAR+ R+ V + TG DEHGQKI Sbjct: 1 MTDKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNHQVFYLTGLDEHGQKIQT 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD ++ +++ ++LDISYD FIRTT+ H + +++K+ + DIY Sbjct: 61 KAEEAGITPQEYVDGMAKGVKELWELLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + +EV++ +G + V+W+ EE YF RL Y D Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFRDENGNVIGGIAPSGHEVEWVSEESYFLRLGKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 KL++++ HPEFI P R NE+I +F++ GL+DL++SR TF WG+K+P +P++++YVWID Sbjct: 181 KLVAFFNEHPEFIQPEGRMNEMIKNFIEPGLEDLAVSRTTFTWGVKVPSNPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291 AL NY T GY + FW H++GKDILRFH+IYWP L+ ++ LP+++ Sbjct: 241 ALLNYATALGYGQEDKANFETFWNNGTVFHMVGKDILRFHSIYWPILLMMLDMKLPERLI 300 Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 +HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRIN 360 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQN 407 +LAN +GNL++R+V+MI K + G IP A+TE+ D + + + + + + M+ Sbjct: 361 YELANDLGNLLNRTVAMINKYFGGKIP---AYTENVTAFDGELQDLVTEKITDYHKQMET 417 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAF 465 RAL + +++S ++Y D PW L K + D+ ++V+ +R +A L+Q F Sbjct: 418 VDYPRALDAIWAIISRANKYIDETAPWVLAKEDGDKEQLASVMAHLAASLRVVAHLIQPF 477 Query: 466 VPKLANKIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + +N I + L + EN + + + PIFPR Sbjct: 478 MMTTSNAIMEQLGLGQSFDLENLSLAGMPSDIT----VISKGQPIFPRL 522 >gi|331266178|ref|YP_004325808.1| methionyl-tRNA synthetase [Streptococcus oralis Uo5] gi|326682850|emb|CBZ00467.1| methionyl-tRNA synthetase [Streptococcus oralis Uo5] Length = 665 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 202/522 (38%), Positives = 314/522 (60%), Gaps = 14/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + Sbjct: 1 MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY Sbjct: 60 KAEEAGITPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119 Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + EV++ G + V+W+ EE YF RLS YQ+ Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQN 179 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ +++SHP+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID Sbjct: 180 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY T GY + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ + Sbjct: 240 ALLNYATALGYGQEDHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDMKLPDRLIA 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +LAN +GNL++R+VSMI K +DG IP T+ D ++ V + + + +M+ Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTDFDNALAQVAEQSISDYHTHMEAVDYP 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469 RAL V +L+S ++Y D PW L K D+ ++V+ +R +A +++ F+ Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHMIEPFMMGT 479 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510 + + L +A E ++L P + PIFPR Sbjct: 480 SRAVLAQLGLA-EVSSLENLSLADFPADVTVVAKGTPIFPRL 520 >gi|320450854|ref|YP_004202950.1| methionyl-tRNA synthetase [Thermus scotoductus SA-01] gi|320151023|gb|ADW22401.1| methionyl-tRNA synthetase [Thermus scotoductus SA-01] Length = 627 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 201/506 (39%), Positives = 302/506 (59%), Gaps = 14/506 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I Y NA+PH+GHAY ++AD LAR+HRLDG F TGTDEHG+ + +AAQ AG Sbjct: 5 FYITTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYQTFFLTGTDEHGETVYRAAQRAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + FVD+ S+ FR ++L I+YDDFIRTTE+RH + + +++ + GDIY G Y G Sbjct: 65 EEPQAFVDRVSQRFRKAWELLGIAYDDFIRTTEERHKRVVQRVLQRVYEAGDIYYGEYEG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y + E +Y + E+ G PV+ E YFFR+ Y++ L+ Y ++HP+ Sbjct: 125 LYCVSCERFYTEKEL----QGDLCPIHGRPVERRREGNYFFRMEKYREWLIDYLQTHPDL 180 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P RNEV+S + + DLS+SR WGI +P D ++ YVW DAL NY++ GY Sbjct: 181 IRPEGYRNEVLSMLSEPIGDLSISRPKARVPWGIPLPWDEVHVTYVWFDALLNYVSALGY 240 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKI 303 D+P A FWP H+IGKDIL+ HA++WP L +A +P+ + + GF+L G K+ Sbjct: 241 PDDP--RFATFWPQAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRKM 298 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SK+LGNV+DP + E+ G DA+RY+L+REI G+D ++ L+ R ADLA+ +GNL+ Sbjct: 299 SKTLGNVVDPFLLTEKYGRDAVRYYLLREIPYGQDTPVSEEALRARYEADLADDLGNLLQ 358 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+ +M+ + DG IP P E +E +R+ +R +++ H AL + ++ V Sbjct: 359 RTRAMLFRFADGRIPEPVPGEELEEG-----TRLAGRLRGLVRDLRFHVALEETMAYVKA 413 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 ++RY + ++PWEL K +P A VLY VE +R +ILL +P ++ L + +E Sbjct: 414 LNRYINEKRPWELFKEDPREAKAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLREEV 473 Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPR 509 R ++ L L + +FP+ Sbjct: 474 RLEEAERWGLAGPLPLPQEAGVLFPK 499 >gi|315637191|ref|ZP_07892413.1| methionine--tRNA ligase [Arcobacter butzleri JV22] gi|315478558|gb|EFU69269.1| methionine--tRNA ligase [Arcobacter butzleri JV22] Length = 650 Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust. Identities = 202/517 (39%), Positives = 319/517 (61%), Gaps = 14/517 (2%) Query: 1 MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M+E K +YI+T I Y N HIGHAY IIAD+LAR+ RL G + TGTDEHGQKIA Sbjct: 1 MQESCKNVYITTPIYYVNDVAHIGHAYTTIIADMLARYSRLTGSNTFLLTGTDEHGQKIA 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 ++A+ T K + D+ S FR + D DI+YD FIRTT++ H + ++ + KGDI Sbjct: 61 QSAEIRNKTPKEYADEISGKFRTLWDDFDITYDKFIRTTDEEHKIGVQKAFEIMYKKGDI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 YKG Y G+Y + E ++ + ++ D Q+ ++EE YFF LS Y++KLL + Sbjct: 121 YKGEYEGFYCVPCETFFPESQL---VDEQFCPDCGRATTLVKEESYFFELSKYEEKLLKW 177 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALT 236 YE + + ILP ++NE+++FVK GLKDLS+SR +F WG+K+P+ +P+++MYVW+DAL Sbjct: 178 YEENEDCILPRSKKNEIVNFVKGGLKDLSISRTSFSWGVKLPESMNEPKHVMYVWLDALL 237 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NY+T GY D FWPA++H++GKDILRFH+IYWPAFL+S +LPLPK + +HG+ Sbjct: 238 NYITALGY--GTDDKNMNFWPANIHLVGKDILRFHSIYWPAFLMSLDLPLPKHIAAHGWW 295 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 GEK+SKS GN+++P EV + G+DA RYF++RE+ G+DG + + L R+N+DL N Sbjct: 296 TRDGEKMSKSKGNIVNPKEVADAYGLDAFRYFMLREVPFGQDGDFSQKALIDRINSDLGN 355 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNL++R M K +D + + + + L + +L + + + N I+R L + Sbjct: 356 DLGNLLNRISGMSGKYFDYKVSSVDV-EKFHKKELDEVNEILDGVEKYIYNMQINRYLEE 414 Query: 417 VISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + +++ ++ + +PW L K + A ++ + ++ ++A+LL + +P+ I Sbjct: 415 IWKVLTIANKAINDYEPWNLMKDGKNAEAMALVALITNIMAKVALLLDSVMPEKIKLIAQ 474 Query: 476 ILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 L + F +L ++ L ++ K + +FPR Sbjct: 475 SLGMNINTETFNNLIINKELLADTVITKV-EQLFPRI 510 >gi|328953224|ref|YP_004370558.1| Methionyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] gi|328453548|gb|AEB09377.1| Methionyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] Length = 638 Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust. Identities = 210/516 (40%), Positives = 307/516 (59%), Gaps = 14/516 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K + LYI+T I Y NA+PHIGHAY ++AD LARFHRL G + F TGTDEHG+K+ +A Sbjct: 3 KPQPPLYITTPIYYVNAEPHIGHAYTTVLADTLARFHRLMGAETRFQTGTDEHGEKVVEA 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G+ K +VDQ S FR D + ISYD FIRTT+ H + + K++ +GDIY Sbjct: 63 ARARGIPVKDYVDQISGRFRGTWDQMQISYDHFIRTTDPLHIQVVQYVLNKVNSQGDIYF 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y+G Y E + + E+ DG+ + Q P +++E YFFR+S YQD L+ Y + Sbjct: 123 SEYAGHYCYGCERFVLEREL---VDGKCPDHQVKPT-YVKEGNYFFRMSRYQDWLIEYIQ 178 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYL 239 +H +FI P RNEV+SF+K L+DL +SR WGI +P D Y+ YVW DAL NYL Sbjct: 179 THTDFIRPERYRNEVLSFLKEPLEDLCISRPRARVQWGIPLPFDDNYVTYVWFDALINYL 238 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T GY D KFWPA H+I KDIL+ H IYWP L + L + HG+ Sbjct: 239 TGLGYPDQ--ALVKKFWPACQHLIAKDILKPHGIYWPTILKATGLEPYHHLNVHGYWQIG 296 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SK+LGNV++P ++++ G+D +RYF +RE+ G D + +D L R+NADLAN +G Sbjct: 297 QGKMSKTLGNVVEPQRLVKQYGLDQVRYFFLREMVYGLDAVFSEDALVGRINADLANDLG 356 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL SRS++M+ K G++P G + +DE + S+ V + + H+AL ++ Sbjct: 357 NLFSRSLAMVFKYRQGVVPEAGPYESADEELRSLAEMVRDDYLGYLPELEFHKALQRLWE 416 Query: 420 LVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 L+ E++RY +PW+L K R +TVLY +E +R + ++L+ +P A+++ + L Sbjct: 417 LIGEINRYIVVMEPWKLFKIQEQQRLNTVLYTILEGLRWVTVMLRPLLPASADRMREQLG 476 Query: 479 VAD---ENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 ++ ++ F+ L RL G L K P+FPR Sbjct: 477 LSPDTWDSGLFELLTWGRLPTGVQLIKG-APLFPRL 511 >gi|269986151|gb|EEZ92464.1| methionyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 483 Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust. Identities = 204/470 (43%), Positives = 302/470 (64%), Gaps = 23/470 (4%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 EK YI+T I Y N +PHIGHAY IIADV AR+HRL+ V F TGTDEHG KI KAA Sbjct: 2 EKFYITTPIYYVNDKPHIGHAYTTIIADVFARWHRLNNEKVFFLTGTDEHGGKIEKAANE 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 T K VD+ S+ ++ + L+ISYD FIRTT+K H +T + KK+ +KGDIYKG Y Sbjct: 62 KNKTPKELVDETSQKYKTTWEKLNISYDKFIRTTDKSHEETVKRFIKKVFEKGDIYKGEY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G+Y L DE Y + E+ G+ + + VQ ++EE YFF+LS Y+D++++ + Sbjct: 122 EGFYCLPDERYITESEL---VGGKCPDCGRD-VQKIKEEAYFFKLSKYKDQIINLI--NK 175 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 ILP + NE+++ +K LKDL +SRK+ WGIK P D + +YVW DAL NYL+ Sbjct: 176 GLILPEKNANEILNRLKGELKDLDISRKSVSWGIKFPLDESHSVYVWFDALLNYLSA--- 232 Query: 245 LDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 L+ PDGS+ K FWPAD+H++GK+I+ FH++ WPA L+SA+LPLPK + +HG+ G+K+ Sbjct: 233 LNWPDGSEFKEFWPADIHLVGKEIVWFHSVIWPAMLMSADLPLPKNILAHGWWTVDGKKM 292 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNV+DPIE+ ++ DA RYFL+RE +DG + + LK+R+N +L + + NLV+ Sbjct: 293 SKSIGNVVDPIEIADKYSADAFRYFLLREKPTWEDGDFSEAALKERINGELMSNLSNLVA 352 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R +++ K ++G I E I + +EI EN + + ++ AL + + + Sbjct: 353 RVLTLAEK-FEGKI-------EGKPEIEDFIRK--EEIIENFEKKDLYSALNLIFEGIRK 402 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++Y + ++PW+L+ N + VLY ++E IR I L+ F+P A KI Sbjct: 403 INKYVNDKEPWKLEGKN---LANVLYNSLEAIRIATIFLKPFMPSTAEKI 449 >gi|19745562|ref|NP_606698.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS8232] gi|25009357|sp|Q8P298|SYM_STRP8 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|19747684|gb|AAL97197.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes MGAS8232] Length = 665 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 197/518 (38%), Positives = 312/518 (60%), Gaps = 11/518 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI A+ Sbjct: 2 KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG++ + +VD +++ + + +LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 62 EAGISPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 121 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + EV++ DGQ + V+W+ EE YF RLS Y D+L+ Sbjct: 122 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 181 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++++ P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL Sbjct: 182 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 241 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P ++ +HG+ Sbjct: 242 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 302 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K +DG +P T D + + L + ++M+ RAL Sbjct: 362 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 V ++++ ++Y D PW L K + D+A ++V+ +R +A ++Q F+ + + Sbjct: 422 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 481 Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I L +A + + PIFPR Sbjct: 482 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 519 >gi|15674551|ref|NP_268725.1| methionyl-tRNA synthetase [Streptococcus pyogenes M1 GAS] gi|13621657|gb|AAK33446.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes M1 GAS] Length = 666 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 191/482 (39%), Positives = 302/482 (62%), Gaps = 11/482 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI A+ Sbjct: 3 KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T + +VD +++ + + +LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 63 EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + EV++ DGQ + V+W+ EE YF RLS Y D+L+ Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYDDRLV 182 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++++ P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P ++ +HG+ Sbjct: 243 NYATALGYRQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K +DG +P T D + + L + ++M+ RAL Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 V ++++ ++Y D PW L K + D+A ++V+ +R +A ++Q F+ + + Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRLVAHVIQPFMMETSAA 482 Query: 473 IF 474 I Sbjct: 483 IM 484 >gi|71910158|ref|YP_281708.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS5005] gi|25009390|sp|Q9A178|SYM_STRP1 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|71852940|gb|AAZ50963.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS5005] Length = 665 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 191/482 (39%), Positives = 302/482 (62%), Gaps = 11/482 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI A+ Sbjct: 2 KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T + +VD +++ + + +LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 62 EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 121 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + EV++ DGQ + V+W+ EE YF RLS Y D+L+ Sbjct: 122 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYDDRLV 181 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++++ P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL Sbjct: 182 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 241 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P ++ +HG+ Sbjct: 242 NYATALGYRQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 302 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K +DG +P T D + + L + ++M+ RAL Sbjct: 362 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 V ++++ ++Y D PW L K + D+A ++V+ +R +A ++Q F+ + + Sbjct: 422 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRLVAHVIQPFMMETSAA 481 Query: 473 IF 474 I Sbjct: 482 IM 483 >gi|269123753|ref|YP_003306330.1| methionyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112] gi|268315079|gb|ACZ01453.1| methionyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112] Length = 624 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 202/508 (39%), Positives = 308/508 (60%), Gaps = 13/508 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YPNA+PHIG AY II DV+AR++ L G +V TG DEHGQKI ++A+ Sbjct: 4 FYITTPIYYPNAKPHIGTAYTTIICDVVARYNNLKGKNVRLITGIDEHGQKIQESAEKNN 63 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT + +VD+ +F ++ D+L+I Y +F+RTT +H T + +K+ + GDIY G Y G Sbjct: 64 VTPQQWVDKMKEDFINLWDILNIDYSEFVRTTSDKHKFTVGDIIRKVYENGDIYSGEYIG 123 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 YS+ +E + + ++ DG Y PV M+E+ +FF+LS Y+DKLL +YE HP F Sbjct: 124 KYSVSEETFVTESQL---VDGLYMGK---PVIDMKEKSFFFKLSKYEDKLLKFYEEHPNF 177 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P R+NEVISF+K GL+DLS+SR TF+WGI + + +I+YVW DAL +YLT GY Sbjct: 178 IRPNNRKNEVISFIKQGLQDLSISRTTFNWGIPLELEKGHIVYVWFDALNSYLTAAGY-- 235 Query: 247 NPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 N + +W +H++GKDILRFHAI WPA L++A + LP + HG+ G+K+S Sbjct: 236 NSEIFDI-YWNNSEVVHMVGKDILRFHAIIWPAMLMAAGIKLPDVLAVHGWWTKDGQKMS 294 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSLGNV+DPI+ + + G+D RYFL+RE G+D Y + +R+N+DLAN +GNL++R Sbjct: 295 KSLGNVVDPIDEVNKYGLDQFRYFLLREATFGQDADYSNMAVIQRINSDLANDLGNLLNR 354 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + M K +D ++ + D I+++ S L+ I L + +S + Sbjct: 355 VIGMQNKYFDSIVYGINELNDLDNEIINLWSETLKNIDIYYSEYNFSEMLKCIWKFISRL 414 Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 ++Y D +PW L K N R TVLY ++ I ++A+L+ +P + KI + L + ++ Sbjct: 415 NKYIDESEPWTLYKNNDMGRLKTVLYNLIDGIYKIAVLISPVMPDSSKKILNQLALEEKE 474 Query: 484 RCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510 +++ + + P + +FPR Sbjct: 475 LSLENIKEWGMYPENNKLNKAEVLFPRI 502 >gi|218295116|ref|ZP_03495952.1| methionyl-tRNA synthetase [Thermus aquaticus Y51MC23] gi|218244319|gb|EED10844.1| methionyl-tRNA synthetase [Thermus aquaticus Y51MC23] Length = 619 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 200/486 (41%), Positives = 297/486 (61%), Gaps = 16/486 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y NA+PH+GHAY ++AD LARFHRLDG F TGTDEHG+ + +AA+ AG Sbjct: 5 FYVTTPIYYVNAEPHLGHAYTTVVADFLARFHRLDGYRTYFLTGTDEHGETVYRAAERAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 K FVD+ S F+ ++L I+YDDFIRTTE+RH +++ KK+ + GDIY G Y G Sbjct: 65 EDPKAFVDRVSERFKKAWELLGIAYDDFIRTTEERHKRVVQLVLKKVYEAGDIYYGEYEG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y + E +Y + E+ +G PV+ E YFFR+ Y++ LL Y ++HP+ Sbjct: 125 LYCVSCERFYTEKELSEG----LCPIHGRPVERRREGNYFFRMEKYREWLLDYLKAHPDL 180 Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P R+EV+S + + DLS+SR WGI +P D +++ YVW DAL NY++ Sbjct: 181 IRPEGYRSEVLSMLSEPIGDLSISRPKSRVPWGIPLPWDEEHVTYVWFDALLNYVSA--- 237 Query: 245 LDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302 LD PDG K + FWP H+IGKDIL+ HA++WP L +A +P+ + + GF+L G K Sbjct: 238 LDYPDGEKYRTFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRK 297 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SK+LGNV+DP + E G DALRY+L+REI G+D ++ L+ R +DLA+ +GNLV Sbjct: 298 MSKTLGNVVDPFSLAERYGRDALRYYLLREIPYGQDTPVSEEALRTRYESDLADDLGNLV 357 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R+ +M+ + +G +P P E +E + + R+ +RE H AL +V++ V Sbjct: 358 QRTRAMLFRFAEGRVPEPVPGEELEEGV-GLPGRLRTLVRELK----FHVALEEVMAYVK 412 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++RY + ++PWEL K +P A VLY VE +R +ILL +P ++ L + +E Sbjct: 413 ALNRYINEKRPWELYKKDPKEAQAVLYRVVEGLRIASILLTPAMPGKMAELRRALGLKEE 472 Query: 483 NRCFQS 488 R ++ Sbjct: 473 VRLEEA 478 >gi|157737467|ref|YP_001490150.1| methionyl-tRNA synthetase [Arcobacter butzleri RM4018] gi|157699321|gb|ABV67481.1| methionyl-tRNA synthetase [Arcobacter butzleri RM4018] Length = 650 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 202/517 (39%), Positives = 320/517 (61%), Gaps = 14/517 (2%) Query: 1 MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M+E K +YI+T I Y N HIGHAY IIAD+LAR+ RL G + TGTDEHGQKIA Sbjct: 1 MQESCKNVYITTPIYYVNDVAHIGHAYTTIIADMLARYSRLTGSNTFLLTGTDEHGQKIA 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 ++A+ T K + D+ S FR + D DI+YD FIRTT++ H + ++ + KGDI Sbjct: 61 QSAEIRNKTPKEYADEISGKFRTLWDDFDITYDKFIRTTDEEHKIGVQKAFEIMYKKGDI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 YKG Y G+Y + E ++ + ++ D Q+ ++EE YFF LS Y++KLL + Sbjct: 121 YKGEYEGFYCVPCETFFPESQL---VDEQFCPDCGRATTLVKEESYFFELSKYEEKLLKW 177 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALT 236 YE + + ILP ++NE+++FVK GLKDLS+SR +F WG+K+P+ +P+++MYVW+DAL Sbjct: 178 YEENEDCILPRSKKNEIVNFVKGGLKDLSISRTSFSWGVKLPESMNEPKHVMYVWLDALL 237 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NY+T GY D FWPA++H++GKDILRFH+IYWPAFL+S +LPLPK + +HG+ Sbjct: 238 NYITALGY--GTDDKNMNFWPANIHLVGKDILRFHSIYWPAFLMSLDLPLPKHIAAHGWW 295 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 GEK+SKS GN+++P EV + G+DA RYF++RE+ G+DG + + L R+N+DL N Sbjct: 296 TRDGEKMSKSKGNIVNPKEVADAYGLDAFRYFMLREVPFGQDGDFSQKALIDRINSDLGN 355 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNL++R M K +D + + + + L + +L +++ + N I+R L + Sbjct: 356 DLGNLLNRISGMSGKYFDYKVSSVDV-EKFHKKELDEVNEILDGVQKYIYNMQINRYLEE 414 Query: 417 VISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + +++ ++ + +PW L K + A ++ + ++ ++A+LL + +P+ I Sbjct: 415 IWKVLTIANKAINDYEPWNLIKDGKNAEAMALVALITNIMAKVALLLDSVMPEKIKLIAQ 474 Query: 476 ILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510 L + F +L ++ L ++ K + +FPR Sbjct: 475 SLGMNINTETFNNLIINKELLADTVITKV-EQLFPRI 510 >gi|158335466|ref|YP_001516638.1| methionyl-tRNA synthetase [Acaryochloris marina MBIC11017] gi|158305707|gb|ABW27324.1| methionyl-tRNA synthetase [Acaryochloris marina MBIC11017] Length = 532 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 190/480 (39%), Positives = 285/480 (59%), Gaps = 8/480 (1%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + ++T + Y N PHIG AY + AD +ARFHRL G +VL TGTDEHGQKI + A Sbjct: 5 QTRRFALTTPLYYVNDLPHIGSAYTTMAADAIARFHRLQGHEVLLITGTDEHGQKIQRTA 64 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + G + D+ ++D+ L+I YD F RTT RH ++++ DKGDI +G Sbjct: 65 EQRGKAPQDHCDEIVAGYKDLWQRLNIQYDRFSRTTSPRHGQIVAEFFQRVWDKGDICQG 124 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 GWY + E + + ++ + + PV+W +E+ YFFRLS YQD LL + Sbjct: 125 HQQGWYCVGCEEFKEERDLL---EDNHCPIHKRPVEWRDEQNYFFRLSKYQDDLLQLFAD 181 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI P RRNEV+SFV+ GL+D S+SR DWG +P D Q+ +YVW DAL Y+T Sbjct: 182 QPDFIQPTSRRNEVLSFVERGLQDFSISRVNLDWGFPVPADDQHTLYVWFDALLGYVTAL 241 Query: 243 GYLDNP---DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 D D + +++WP +LH+IGKDILRFHA+YWPA L+SA+LPLP +VF HGF+ Sbjct: 242 LDEDTEPTLDQALSQWWPINLHLIGKDILRFHAVYWPAMLMSADLPLPDRVFGHGFLTKD 301 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G+K+ KSLGN +DP+E+++ G DA+RY+ ++ + G+DG + + VNADLAN +G Sbjct: 302 GQKMGKSLGNTLDPVELVDRYGTDAVRYYFLKALEFGRDGDFSETRFIDVVNADLANSLG 361 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 NL++R++ M +K +G +P + D + + + ++ + QN +A + Sbjct: 362 NLLNRTLKMAVKYCNGQVPDIDIQSIPEDHPLAQLGRKAGDQVAKAYQNLNFSQACNISL 421 Query: 419 SLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 LV +++ D Q PW L KK + +LY +E +R A LL +P L+ +I+ L Sbjct: 422 GLVKAGNQFIDEQAPWSLYKKGEQGLVNEILYTVLESVRLSAYLLTPVIPNLSTQIYQQL 481 >gi|319939574|ref|ZP_08013933.1| methionyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] gi|319811163|gb|EFW07469.1| methionyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] Length = 679 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 200/520 (38%), Positives = 309/520 (59%), Gaps = 14/520 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + YI+T I YP+ + HIG AY I DVLAR+ RL G DV + TG DEHGQKI + A+ Sbjct: 17 EKNFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQKAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+ + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY G Sbjct: 77 EAGIIPQAYVDSMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGE 136 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + EV++ G+ + V+W+ EE YF RL Y D+L+ Sbjct: 137 YSGWYSVSDEEFFTESQLAEVFRDESGKVIGGIAPSGHEVEWVSEESYFLRLGKYADRLV 196 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++ +HP+FI P R NE+I +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL Sbjct: 197 EFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDALL 256 Query: 237 NYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 NY T GY + + KFW H++GKDILRFH+IYWP L+ ++ LP ++ +HG Sbjct: 257 NYATVLGYGQDDHANFEKFWNNGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPDRLIAHG 316 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +L Sbjct: 317 WFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYEL 376 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 AN +GNL++R+V+MI K +DG +P TE D + +V + + + M RA Sbjct: 377 ANDLGNLLNRTVAMINKYFDGQVPIYKENVTEFDADLAAVVAENIAIYHKQMDAVDYPRA 436 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 L V +++S ++Y D PW L K D + V+ V +R +A L+Q F+ +N Sbjct: 437 LEAVWNIISRTNKYIDETAPWVLAKDEAKRDELAAVMAHLVASLRVVAHLIQPFMMTTSN 496 Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 I + L + + ++LD L G + PIFPR Sbjct: 497 AIMEQLGLG-TDFDLENLDLAELPTGLTVVAKGTPIFPRL 535 >gi|124802884|ref|XP_001347624.1| methionine-tRNA ligase, putative [Plasmodium falciparum 3D7] gi|23495207|gb|AAN35537.1| methionine-tRNA ligase, putative [Plasmodium falciparum 3D7] Length = 889 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 191/478 (39%), Positives = 294/478 (61%), Gaps = 13/478 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + E YI+TAI Y N PHIGHAYE+++AD +AR+H++ G D FTTG DEHG KIA A Sbjct: 221 KNETFYITTAINYVNGDPHIGHAYEIVLADAIARYHKIIGRDTFFTTGADEHGLKIANQA 280 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 +T K D+N F+++ +L + D ++RTT H + +W K GDIY G Sbjct: 281 AKNNMTPKELCDKNVLKFQNLNKLLYVEDDYYVRTTRDSHKKIAQEVWDKCEKNGDIYLG 340 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y GWY++R+E Y ++E Y + +N ++ M+E YFF++S YQDKL+ Y + Sbjct: 341 EYEGWYNVREETYVPENE---AKLMNYIDPLNNIKLEKMKEPSYFFKMSKYQDKLIEYIQ 397 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 S+P++I P ++RNE++ +K L DLS SR F WGI++P+DP+++MYVW+DAL NY ++ Sbjct: 398 SNPDYIQPEQKRNEILQRLKEPLADLSCSRTKFTWGIQVPNDPKHVMYVWMDALINYYSS 457 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-G 300 D K K+WPA++H+IGKDI FH + +P LLSAN+PL K VFSHGF+L G Sbjct: 458 CFI----DEGKKKYWPANVHIIGKDITWFHTVIFPTILLSANIPLSKSVFSHGFVLAADG 513 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKSLGNVI+P+E+I++ G DA RY +++E G D +D D L N+DLA+ IGN Sbjct: 514 KKMSKSLGNVINPLEIIDKYGADAFRYHVIKETKRGCDTRFDVDNLVDMCNSDLADTIGN 573 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVIS 419 LV R++S+ + IP AF E L + + + +M+ + + + + Sbjct: 574 LVQRTLSLCQLCNESKIP---AFYPEYEIHLPIDILHFINRVEYHMKTFCVQKCCEKSVQ 630 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + +++++ PW+ K ++ ++ + +E I +A L F+P L++KIF+ L Sbjct: 631 VCKDLNKFLTDMAPWKYKDDLKNKKLHIIRIMLEAIYFIAHYLDIFIPSLSHKIFEKL 688 >gi|154337126|ref|XP_001564796.1| methionyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134061834|emb|CAM38870.1| putative methionyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 752 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 204/504 (40%), Positives = 291/504 (57%), Gaps = 27/504 (5%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K+++ + ++ I Y NA PHIGH Y +I DVL R+HR+ G +V TGTDEHGQK+A+A Sbjct: 207 KKQKTFFATSPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHGQKVAEA 266 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A GV+T F S F+ ++ + FIRTT H +WKK+ KGDIY Sbjct: 267 AAKQGVSTMDFTTSVSNEFKQCFKEMNYDMNYFIRTTNPMHEKLVGDIWKKLEAKGDIYL 326 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP----------VQWMEEEGYFFRLSA 171 G Y GWYS+ DE++ V D NP V W+ EE Y FRLSA Sbjct: 327 GKYEGWYSVSDESFLTAQNVADSVD-----KDGNPCKISLESGHVVTWVVEENYMFRLSA 381 Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIKIPDDPQYIM 228 ++++LL ++ HP I+P RR EVI V+ GL DLS+SRK +W I +P D ++ + Sbjct: 382 FRERLLKHFHDHPNCIVPEFRRREVIKTVEKGLFDLSISRKCESVMNWSIPVPGDDRHCI 441 Query: 229 YVWIDALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILRFHAIYWPAFLL 280 YVW+DAL +Y + DG++A WPADL V+GKDIL+FHAIYWPAFL+ Sbjct: 442 YVWLDALFSYYVGSIVRVAADGTEALDEDYRTLSRWPADLQVVGKDILKFHAIYWPAFLM 501 Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 SA+LPLP+++ SHG+ +KISKSLGN DP+E E G+DA +YFL+RE DG Sbjct: 502 SADLPLPERLVSHGWWTKDHKKISKSLGNAFDPVEKANEFGIDAFKYFLLRESNFQDDGD 561 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 Y + R+N +LA+ +GNLVSR V+ + + G+ P P + E+D ++++ + + Sbjct: 562 YSDRNMVARLNGELADTLGNLVSRCVTPKI-NVGGVWPEPAEYNETDRTLIASLNNLAGT 620 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460 + I AL + ++ ++ Y PW+L KT+ R TVLYVT+E +R + Sbjct: 621 VDHYYCLPDIQNALIAIFDVLRSLNVYVTDNAPWKLVKTDTARLGTVLYVTMEGLRICNM 680 Query: 461 LLQAFVPKLANKIFDILFVADENR 484 LQ +P+ A +I D L V + R Sbjct: 681 FLQPVMPQKAKEIMDALGVPEGVR 704 >gi|75908935|ref|YP_323231.1| methionyl-tRNA synthetase [Anabaena variabilis ATCC 29413] gi|75702660|gb|ABA22336.1| methionyl-tRNA synthetase [Anabaena variabilis ATCC 29413] Length = 530 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 198/485 (40%), Positives = 293/485 (60%), Gaps = 15/485 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K + ++T + Y N PHIG AY + AD +ARF +L G DVL TGTDEHGQKI ++ Sbjct: 6 KSEKTFALTTPLYYVNDVPHIGSAYTTMAADAVARFQKLLGRDVLLITGTDEHGQKIQRS 65 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A++ G + F D+ +F + +L+I YD F RTT RH + ++ GDIY+ Sbjct: 66 AESLGKAPQEFCDEIVPSFMSLWQLLNIQYDRFSRTTAVRHKAIVDEFFARVWQAGDIYQ 125 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 G GWY + E + + E+ +G + + V+W +E+ YFFRLS YQ +L +Y+ Sbjct: 126 GQQKGWYCVSCEEFKEERELLEGNRCPIH--VNKEVEWRDEQNYFFRLSKYQTQLEEFYK 183 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 SHP+FI P RRNEV++FV GL+D S+SR DWG +P D ++ +YVW DAL Y+T Sbjct: 184 SHPDFIQPESRRNEVLNFVSQGLQDFSISRVNLDWGFPVPTDSKHTLYVWFDALLAYVT- 242 Query: 242 TGYLDNPD-----GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 LD D + AK+WP +LH+IGKDILRFHA+YWPA LLSA LPLP +VF HGF+ Sbjct: 243 -ALLDPQDEPTLENALAKWWPINLHLIGKDILRFHAVYWPAMLLSAGLPLPDRVFGHGFL 301 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 G+K+ KSLGN IDP+ ++++ G DA+RY+ ++EI GKDG +++ +NADLAN Sbjct: 302 TKDGQKMGKSLGNTIDPVGLVQQYGSDAVRYYFLKEIEFGKDGDFNEVRFINVLNADLAN 361 Query: 357 GIGNLVSRSVSMILK---DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 +GNL++R+++M+ K +Y I E+ L V + ++++ + ++A Sbjct: 362 DLGNLLNRTLNMVKKYCANYALSITNEDIPAENTLKALGV--DLGAKVKQAYEVLAFNQA 419 Query: 414 LAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 V+SLV +++ D Q PW L K+ TVLY +E +R A LL +P +++ Sbjct: 420 CGVVLSLVQASNKFIDDQAPWSLYKQGRQQEVETVLYTVLESVRLAAYLLSPVIPNISSS 479 Query: 473 IFDIL 477 I+ L Sbjct: 480 IYQQL 484 >gi|71902998|ref|YP_279801.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS6180] gi|71802093|gb|AAX71446.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS6180] Length = 666 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 196/518 (37%), Positives = 312/518 (60%), Gaps = 11/518 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI A+ Sbjct: 3 KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+T + +VD +++ + + +LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 63 EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122 Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + +EV++ DG+ + V+W+ EE YF RLS Y D+L+ Sbjct: 123 YSGWYSVSDEEFFTESQLEEVFRDEDGKVIGGIAPSGHQVEWVSEESYFLRLSKYADRLV 182 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++++ P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P ++ +HG+ Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K +DG +P T D + L + ++M+ RAL Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADFSQLIDAQLADYHKHMEAVDYPRAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 + ++++ ++Y D PW L K + D+A ++V+ +R +A ++Q F+ + + Sbjct: 423 EAIWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482 Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I L +A + + PIFPR Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520 >gi|322411230|gb|EFY02138.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 665 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 189/482 (39%), Positives = 305/482 (63%), Gaps = 11/482 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI A Sbjct: 2 KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAA 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG++ + +VD +++ +D+ +LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 62 EAGISPQTYVDNMAKDVKDLWQLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 121 Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + +EV++ DG+ + V+W+ EE YF RLS Y D+L+ Sbjct: 122 YSGWYSVSDEEFFTESQLEEVFRDEDGKVIGGIAPSGHQVEWVSEESYFLRLSKYADRLV 181 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++++ P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWIDAL Sbjct: 182 AFFKEQPDFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALL 241 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P+++ +HG+ Sbjct: 242 NYATALGYGQMDHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D+LRY+L+R + G DG + + R+N +LA Sbjct: 302 FVMKDGKMSKSKGNVVYPEMLVERFGLDSLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K +DG +P T D + + L + + M++ RAL Sbjct: 362 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDTELSQLIDAQLVDYHKYMESVDYPRAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 + ++++ ++Y D PW L K + D+A ++V+ +R +A L+Q F+ + + Sbjct: 422 EAIWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHLIQPFMMETSAA 481 Query: 473 IF 474 I Sbjct: 482 IM 483 >gi|154175104|ref|YP_001407916.1| methionyl-tRNA synthetase [Campylobacter curvus 525.92] gi|112803429|gb|EAU00773.1| methionyl-tRNA synthetase [Campylobacter curvus 525.92] Length = 636 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 211/510 (41%), Positives = 310/510 (60%), Gaps = 10/510 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK+YI+T I Y N PHIGHAY IIAD ARF RL G F TGTDEHGQKI +AA+ Sbjct: 2 KEKVYITTPIYYVNDVPHIGHAYTTIIADTFARFKRLQGHPTYFMTGTDEHGQKIEQAAK 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T K + D+ S FR + D +ISYD FIRTT++ H T + ++ K+ GDIYKG Sbjct: 62 ARGKTPKEYADEISAKFRTLWDEFEISYDHFIRTTDEEHKLTAQNVFSKMQANGDIYKGE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G+Y + E ++ ++ D ++EE YFFRLS YQD LL +Y++ Sbjct: 122 YEGFYCVSCETFFTATQLL---DDNCCPDCGRKTSIVKEESYFFRLSKYQDALLKWYKND 178 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLT 240 ++P ++NEV+SFVK GLKDLS++R +FDWG+K+P +DP+++MYVW+DAL NYLT Sbjct: 179 ELCVIPRGKKNEVVSFVKGGLKDLSITRTSFDWGVKLPASANDPKHVMYVWLDALVNYLT 238 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 T GY + D + FW H++GKDILRFHA+YWPAFL+S NL LPK V +HG+ G Sbjct: 239 TLGY--SRDDALMDFWQNTTHIVGKDILRFHAVYWPAFLMSLNLALPKHVAAHGWWTRNG 296 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKS GNVIDP EV + G++ RYF++RE+ G+DG + + L +R+N++L NG+GN Sbjct: 297 EKMSKSKGNVIDPREVAKAYGLENFRYFMLREVPFGQDGDFSQKALIERINSELGNGLGN 356 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L++R + M K + I + + + + I EN++ +R L ++ + Sbjct: 357 LLNRIIGMSGKYSEFKIDASNVAKFYNAELEEAHAHLKSAI-ENLEVLATNRYLEELWKV 415 Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 V+ + +PW + K+ A+ ++ ++ ++ ++A+LL +PK A KI + L Sbjct: 416 VTLANGVIAKYEPWAMIKEGKTTEANALVALSANLLAKVAVLLSPAMPKTAGKIAEALSF 475 Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 R F+ L + K +P+FPR Sbjct: 476 EINERSFKDLVLDNGVQNFISKPTEPLFPR 505 >gi|257066998|ref|YP_003153254.1| methionyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] gi|256798878|gb|ACV29533.1| methionyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] Length = 648 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 205/501 (40%), Positives = 308/501 (61%), Gaps = 30/501 (5%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YPN+ HIG+ Y +IADVL R+ L G D TTGTDEHGQKI + Sbjct: 1 MTEKKAYYITTPIYYPNSNLHIGNTYTSVIADVLKRYKNLKGFDAYLTTGTDEHGQKIMR 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A +AG + + FVD + +++ L+I YD FIR+TE +H ++ K+ +KGDIY Sbjct: 61 TALDAGTSPQKFVDIIAEETKELWKKLEIDYDTFIRSTEDQHEKDVAEIFTKLYEKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175 KG Y G+Y E ++ + ++ G H P V++ EEE YFFRLS Y D+ Sbjct: 121 KGEYKGYYCTPCETFWTESQLEDG---------HCPDCGREVEYQEEETYFFRLSKYTDR 171 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L ++ HPEF+ P R+ E+++ F+ GL DLS++R +FDWG+ +P D ++++YVWIDA Sbjct: 172 LKELFKEHPEFLEPQFRQKEMLNNFIDKGLSDLSVTRNSFDWGVDVPFDNEHVVYVWIDA 231 Query: 235 LTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291 L+ YL+ GY D+ KAKF WPA +H+IGKDI+RFH I WPA L++ +LPLP+KVF Sbjct: 232 LSCYLSAIGYGDD----KAKFERYWPAGVHLIGKDIVRFHTIIWPALLMALDLPLPEKVF 287 Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 +HG+IL +K+SKS GN++ P +++ GVDAL+++++RE G DG + +R N Sbjct: 288 AHGWILFDNDKMSKSKGNIMYPEPLVDLYGVDALKFYMLREFNFGSDGNFSARKYMERYN 347 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLI 410 +DL N +GNLVSR+ SMI K Y+G G ++S D+ ++++ + + M Sbjct: 348 SDLVNDLGNLVSRTTSMIAK-YNGGEVRKGTVSDSFDDELITLAEETYTKFNKLMDEFNF 406 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPK 468 + AL V +L+ ++Y D +PW L + N +R VLY E IR +A L++ P Sbjct: 407 NAALEAVWTLIRRANKYVDETEPWILGRDEANKERLDRVLYNLAETIRIVAQLIE---PV 463 Query: 469 LANKIFDILF-VADENRCFQS 488 + N IL + +N+ F+S Sbjct: 464 MKNTTATILEKIGTDNKGFES 484 >gi|145346067|ref|XP_001417517.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577744|gb|ABO95810.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 573 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 203/480 (42%), Positives = 292/480 (60%), Gaps = 17/480 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E+ ++TAI Y N PH+GHAYE I DVLAR+HR G VLF TG+DEHGQKIA+AA+ Sbjct: 74 ERFSVTTAINYANGAPHMGHAYESISTDVLARYHRAYGRQVLFQTGSDEHGQKIAEAAEE 133 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ FVD + F+++ LD+S D + RTT + H C L+++ D GDIY Y Sbjct: 134 KGMAPLAFVDTHVAEFQNLNKRLDVSNDVYNRTTSEAHKKACAELFRRSRDNGDIYLDTY 193 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY++R+E + + E A G ++ M+EE YFF+ S YQ +L+++ ES+P Sbjct: 194 EGWYNVREETFVTESEAQ--ASGYKDPVSGKDLKKMKEESYFFKQSRYQKQLIAHIESNP 251 Query: 185 EFILPIERRNEVISFVKS-GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 EFI P RRNE+++ +++ L+DLS+SR TFDWGI +PD P+++MYVW DALTNYLT TG Sbjct: 252 EFIQPSSRRNEILARLQNDDLRDLSVSRTTFDWGIPVPDAPKHVMYVWFDALTNYLTGTG 311 Query: 244 YLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGE 301 + P+ ++ K FWPA +H+IGKDI+ FH + WP L SA LPLPK VF HGF+ G+ Sbjct: 312 W---PEETENKDFWPASVHIIGKDIIWFHCVIWPCMLWSAGLPLPKTVFGHGFVTADDGQ 368 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS+GNV+DP +V++ D RY+L+R G D + + + NADLA+ IGNL Sbjct: 369 KMSKSIGNVVDPNDVLKRFSSDTFRYYLMRCGVYGADVPFSEPAMIAIHNADLADVIGNL 428 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420 V R ++ K+ G+IP + E++ SV VL+ E ++ I A I Sbjct: 429 VHRVTNLCKKNCGGIIPDCAS-----ENVFSV--GVLRAKSEAAMSRFNIQGACELAIEA 481 Query: 421 VSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + ++Y PW +K +R S ++ T+E + LQ +VPK +F+ L V Sbjct: 482 IKCTNKYLTDSAPWAVKGEGAEERKSVIIKSTLEAVYVAMHFLQPYVPKACGLVFEKLGV 541 >gi|212702582|ref|ZP_03310710.1| hypothetical protein DESPIG_00606 [Desulfovibrio piger ATCC 29098] gi|212674023|gb|EEB34506.1| hypothetical protein DESPIG_00606 [Desulfovibrio piger ATCC 29098] Length = 654 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 197/478 (41%), Positives = 297/478 (62%), Gaps = 13/478 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+T I Y NA+PH+GHAY I+AD L+RFH+ G + +F TGTDEHG KI KAA+ Sbjct: 2 KNFYITTPIYYVNAKPHLGHAYTTIVADSLSRFHKTLGDNTMFLTGTDEHGDKIVKAAEK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ K FVD S F+ + L I D F+RTT++ H + +++ D GDIY G + Sbjct: 62 QGVSPKEFVDGISGLFQQLWPHLGIENDAFVRTTDEDHKARVQRFLQQVYDAGDIYFGEF 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y E +Y + E+ G Q+ +++ E+ YFFR+S Y L Y ESHP Sbjct: 122 GGHYCYGCERFYTEKELENGLCPQHLTKP----EFISEKNYFFRMSKYLPWLREYIESHP 177 Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +FI P RNEV+S ++SG L+DL +SR WGI++P D Y+ YVW DAL NY++ Sbjct: 178 DFIRPERYRNEVLSMLESGALEDLCISRPKSRLTWGIELPFDKDYVCYVWFDALLNYISA 237 Query: 242 TGYLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 G+ PDG K K FWP + H++ KDIL+ HA++WP L +A LP+ + + HG+ L + Sbjct: 238 LGW---PDGEKYKTFWPGE-HLVAKDILKPHAVFWPTMLKAAGLPMYQHLNVHGYWLVRD 293 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKSLGNV++P+E+ ++ G+DA RYFL+RE+ G D + ++G+ R+NADLAN +GN Sbjct: 294 TKMSKSLGNVVEPLEMRQKYGLDAFRYFLLREMHFGSDASFSEEGMVTRINADLANDLGN 353 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SR +SM K ++ +P PG F+E D++I+ +C+ + + N + L + L Sbjct: 354 LFSRVLSMTAKYFESKVPQPGEFSEDDKAIVELCATAMTNYIQLFGNTQFAQGLDSLWDL 413 Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V +++Y D+Q PW L K+ + R TV+YV + +R++A+ L A +P + + + L Sbjct: 414 VRALNKYVDSQAPWTLFKQGDTMRLGTVMYVLLSAMRKVALCLWAVMPDASRTLLEQL 471 >gi|296271126|ref|YP_003653758.1| methionyl-tRNA synthetase [Thermobispora bispora DSM 43833] gi|296093913|gb|ADG89865.1| methionyl-tRNA synthetase [Thermobispora bispora DSM 43833] Length = 530 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 196/493 (39%), Positives = 297/493 (60%), Gaps = 12/493 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y N PH+GHAY + DVL R+HR G V F TGTDEHGQKI + A+ G Sbjct: 14 FYVTTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGERVWFLTGTDEHGQKIMRTAEANG 73 Query: 67 VTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 T + + D+ ++ + + L+I+ DDFIRTTE RH + + + DKG+IYKG Y Sbjct: 74 TTPQEWCDKLVETAWKPLWEHLEIANDDFIRTTEPRHTKRVQEFVQDLYDKGEIYKGGYE 133 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y + E Y + E+ +G+ P++W++EE YFFRLSAY +LL +YE +P+ Sbjct: 134 GPYCVGCEEYKSPGELL---EGELCPIHKRPIEWLKEENYFFRLSAYGQRLLEHYERNPD 190 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P RNEV+ FV+ GL+DLS+SR TF WGI IP DP++++YVW+DAL NY+T GY Sbjct: 191 FIQPASARNEVVQFVRQGLQDLSISRSTFTWGIPIPWDPKHVIYVWVDALLNYVTAVGYG 250 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + + ++ WPAD+H++GKDILRFHA+ WPA L++ LPLPKK+F++G+++ GEK+SK Sbjct: 251 SDEEKFRST-WPADVHLVGKDILRFHAVIWPAMLMANGLPLPKKIFANGWLMVGGEKMSK 309 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S I P ++ GVDA RY+ +R I G+DG + + R ++LAN GNL SR Sbjct: 310 SNLTGISPRDLTGTFGVDAYRYYFLRAIPFGQDGSFSWEDFAARYTSELANDFGNLASRV 369 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424 +M+ K + G +P ++++I + ++ + + L + + + +V Sbjct: 370 AAMVGKYFGGTLPEATDAGPAEQAIADGLAAAAEQADRMIGDNLDFSGGIGAIFDFIKQV 429 Query: 425 DRYFDAQKPWELKKTN-PD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 + Y Q+PW++ K + P+ R +T+LY E +R +A+LL +P K++ L Sbjct: 430 NGYLTEQQPWKVAKDDSPEARARLATILYTAAEALRGIAVLLNPVMPVACAKLWASL--G 487 Query: 481 DENRCFQSLDQRL 493 E DQR+ Sbjct: 488 AEPHLGPLADQRI 500 >gi|325679112|ref|ZP_08158706.1| methionine--tRNA ligase [Ruminococcus albus 8] gi|324109236|gb|EGC03458.1| methionine--tRNA ligase [Ruminococcus albus 8] Length = 659 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 191/478 (39%), Positives = 301/478 (62%), Gaps = 12/478 (2%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I YP+ PHIGH Y + D +AR+ R+ G DV+F TGTDEHGQKI A++ Sbjct: 3 KFYITTPIYYPSGDPHIGHCYTTVACDSIARYKRMQGYDVMFLTGTDEHGQKIEDKARDK 62 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT + +VD+ F+ + ++ISYD +IRTT+ H ++ + ++K++ DKG IYKG Y+ Sbjct: 63 GVTPQQYVDEVVATFKKLWSYMNISYDRYIRTTDDYHVESVQKIFKELYDKGYIYKGEYT 122 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y E+++ + ++ ADG H PV+ EE YFF++S + D++ + + Sbjct: 123 GKYCTPCESFWTESQL--DADGCCPEC-HRPVKEASEEAYFFKMSPFADRIEKLL-TETD 178 Query: 186 FILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 ++ P R E++ +F+K GL+DL +SR +F WGI + DP++++YVW+DAL+NY T GY Sbjct: 179 YLRPKTRATELVNNFIKPGLEDLCVSRTSFTWGIPVTFDPKHVVYVWVDALSNYCTALGY 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK----- 299 +N K+WPAD+H++ KDI+RFHAI WPA L++ + PLPK + HG+I + Sbjct: 239 KNNKYNDYDKYWPADVHMVAKDIMRFHAIIWPAILMALDEPLPKHLAVHGWITFQNKNGE 298 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 +K+SKSLGNV+DP + E GVDA+RY ++RE+A G D + + + R+N+DLANG G Sbjct: 299 AQKMSKSLGNVVDPFMLGERYGVDAIRYHILREMALGADSAFSNEIMINRINSDLANGFG 358 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLVSR+V+M K + G +P + D+S+ V +++ + + + AL ++ Sbjct: 359 NLVSRTVAMADKYFGGTLPETRLEGDFDQSLKDCLLSVREKVDKCIDETRLKNALEEIFV 418 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 V ++Y D +PW L K + DR ++VLY +E IR ++ LL AF+P ++++ Sbjct: 419 AVDRANKYIDETEPWVLGKDESKYDRLASVLYNLLESIRIISTLLSAFMPTTMPEVWE 476 >gi|268610250|ref|ZP_06143977.1| methionyl-tRNA synthetase [Ruminococcus flavefaciens FD-1] Length = 661 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 200/517 (38%), Positives = 312/517 (60%), Gaps = 15/517 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ PHIGH Y + D +AR+ R+ G DV+F TGTDEHG KI + A Sbjct: 3 KKPFYITTPIYYPSGNPHIGHCYTTVACDSIARYKRMQGYDVMFLTGTDEHGLKIEQKAA 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT K +VD F+++ ++ISYD +IRTT+ H + + ++K + DKG IYKG Sbjct: 63 EQGVTPKEYVDVIVDRFKNLWKYMNISYDRYIRTTDDYHVEAVQKIFKALYDKGYIYKGE 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 YSG Y E+++ D ++ + H PV++ +EE YFF++S + D++ Sbjct: 123 YSGKYCTLCESFWTDSQL---DENGCCPECHRPVKYAKEEAYFFKMSPFADRIEKLL-LE 178 Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 +++ P R E++ +F+K GL+DL +SR TF WG+ + D ++++YVWIDAL+NY+T Sbjct: 179 TDYLRPKTRAVELVNNFIKPGLEDLCVSRTTFKWGVPVSFDDKHVVYVWIDALSNYITAL 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG-- 300 GY ++ K+WPAD+H++ KDI+RFHAI WPA L++ +PLPK + HG+I G Sbjct: 239 GYENSAYNDYEKYWPADVHMVAKDIMRFHAIIWPAMLMALEIPLPKHLAVHGWITMAGKN 298 Query: 301 ---EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 EK+SKSLGNV+DP + E G DA+RY ++RE+A G D + + + R+N+DLANG Sbjct: 299 GESEKMSKSLGNVVDPFVLGERYGQDAIRYHILREMALGADSLFSNEIMINRINSDLANG 358 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 GNLVSR+V+M+ K + G IP+ DE +V +L E+ + + + +AL + Sbjct: 359 FGNLVSRTVAMVDKYFGGTIPSEREDDALDEEFRNVILGLLPEVDKYVDETKLKQALETI 418 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 VS ++Y D +PW+L K +A ++VLY +E IR + LL F+P K+++ Sbjct: 419 FEGVSRANKYIDETEPWKLGKDESKKARLASVLYNLLEAIRITSALLAPFMPTTMPKVWE 478 Query: 476 ILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 + + + + LD+ L +HK + +FPR Sbjct: 479 QIGASGADVEYSKLDKFGVLPENVTVHKG-EILFPRI 514 >gi|322389048|ref|ZP_08062615.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 903] gi|321144247|gb|EFX39658.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 903] Length = 663 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 203/524 (38%), Positives = 314/524 (59%), Gaps = 25/524 (4%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+T I YP+ + HIG AY I DVLAR+ R+ DV + TG DEHGQKI + A+ Sbjct: 3 KSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY G Y Sbjct: 63 AGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEY 122 Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLS 178 SGWYS+ DE ++ + EVY+ +G+ + V+W+ EE YF RLS YQD+L+ Sbjct: 123 SGWYSVSDEEFFTESQLAEVYRDENGKVIGGVAPSGHEVEWVSEESYFLRLSKYQDRLVE 182 Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237 +++S P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWIDAL N Sbjct: 183 FFKSQPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALLN 242 Query: 238 YLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 Y+T GY + KFW + H++GKDILRFH+IYWP L+ ++ LP+++ +HG+ Sbjct: 243 YVTALGYGQEDHENFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIAHGWF 302 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 + K K+SKS GNVI P ++E G+D LRY+L+R + G DG + + R+N +LAN Sbjct: 303 VMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINYELAN 362 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHR 412 +GNL++R+V+MI K Y G +P A+ E+ D + V + E + M R Sbjct: 363 DLGNLLNRTVAMINKYYGGQVP---AYVENVTAFDADLAKVVEENIAEYHKQMNAVDYPR 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL V +++S ++Y D PW L K + D+ + V+ +R +A L+Q F+ + Sbjct: 420 ALEAVWNIISRTNKYIDETAPWVLAKEDGDKDQLAAVMAHLAASLRVVAHLIQPFMMNTS 479 Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510 N I + L + + L+ GF + T PIFPR Sbjct: 480 NAIMEQLGLGLDF----DLENLTLAGFPENVTVVAKGTPIFPRL 519 >gi|251781887|ref|YP_002996189.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390516|dbj|BAH80975.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 666 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 190/485 (39%), Positives = 304/485 (62%), Gaps = 11/485 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI A Sbjct: 3 KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAA 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG++ + +VD +++ +D+ +LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 63 EAGISPQTYVDNMAKDVKDLWQLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122 Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + +EV++ DG+ + V+W+ EE YF RLS Y D+L+ Sbjct: 123 YSGWYSVSDEEFFTESQLEEVFRDEDGKVIGGIAPSGHQVEWVSEESYFLRLSKYADRLV 182 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++++ P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWIDAL Sbjct: 183 AFFKEQPDFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALL 242 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P+++ +HG+ Sbjct: 243 NYATALGYGQMDHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIAHGW 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K +DG +P T D + + L + + M+ RAL Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDTELSQLIDAQLADYHKYMEAVDYPRAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 + ++++ ++Y D PW L K + D+A ++V+ +R +A L+Q F+ + + Sbjct: 423 EAIWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHLIQPFMMETSAA 482 Query: 473 IFDIL 477 I L Sbjct: 483 IMTQL 487 >gi|224373264|ref|YP_002607636.1| methionyl-tRNA synthetase [Nautilia profundicola AmH] gi|223589648|gb|ACM93384.1| methionyl-tRNA synthetase [Nautilia profundicola AmH] Length = 635 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 206/515 (40%), Positives = 311/515 (60%), Gaps = 26/515 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I Y N PHIGHAY IIAD++AR+ RL G+D F TGTDEHGQKI +AA+ G Sbjct: 9 YLTTPIYYVNDIPHIGHAYTTIIADMVARYSRLKGIDTFFLTGTDEHGQKIEEAAKKRGK 68 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + K + D+ S F+ + D +ISYD FIRTT++ H + + + KGDIYK Y G Sbjct: 69 SPKEYADEISGKFKALWDEFEISYDKFIRTTDEAHKKGVQKAFLDMYKKGDIYKDYYEGH 128 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E++ ++ + + P + ++EE YFFRLS YQD+LL + ++ I Sbjct: 129 YCVSCESFVAPSQL---VNDELCPDCGKPTRIIKEESYFFRLSKYQDQLLDWLKNKKP-I 184 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244 LP + NEVI FV+ GLKDLS++R +F+WG+K+P +DP++++YVW+DAL NYLT GY Sbjct: 185 LPEAKANEVIRFVEEGLKDLSITRTSFEWGVKLPPEINDPKHVVYVWLDALFNYLTALGY 244 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D K+WPA LH++GKDIL+FHA+YWPAFL+S LPK + +HG+ GEK+S Sbjct: 245 GSENDELVKKYWPAKLHIVGKDILKFHAVYWPAFLMSIGYELPKVIAAHGWWTRDGEKMS 304 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNVI+P +V + G++ RYF++RE+ G DG + + L R+N DL N +GNL++R Sbjct: 305 KSKGNVINPKDVADAYGLENFRYFMLREVPFGADGDFSEKALIDRINNDLGNDLGNLLNR 364 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--------QLIHRALAQ 416 + M K +DG I + +++ + L E RE ++N IH+ L + Sbjct: 365 IIGMAYKYFDGKI--------TSKNVEKYYANELNEAREIVKNLEETYLWKMQIHKFLEE 416 Query: 417 VISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + +++ ++ D KPWEL K ++A +L + ++ +A+ L A +PK KI Sbjct: 417 LWKVLAIGNKAIDTYKPWELMKNGEEEKAQALLGLISNLLAMVAVNLHAVMPKTTAKIAK 476 Query: 476 ILFVADENRCFQS-LDQRLKPGFMLHKTFDPIFPR 509 L F++ +D +L F++ K P+FP+ Sbjct: 477 SLGFEINQESFKNIMDGKLLDDFVIEK-IPPLFPK 510 >gi|323126698|gb|ADX23995.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 665 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 188/482 (39%), Positives = 303/482 (62%), Gaps = 11/482 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI A Sbjct: 2 KKTFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYEVFYLTGLDEHGQKIQTKAA 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG++ + +VD +++ +D+ +LDISY+ FIRTT+ H + +++K+ + DIY G Sbjct: 62 EAGISPQTYVDNMAKDVKDLWQLLDISYNKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 121 Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + +EV++ DG+ + V+W+ EE YF RLS Y D+L+ Sbjct: 122 YSGWYSVSDEEFFTESQLEEVFRDEDGKVIGGIAPSGHQVEWVSEESYFLRLSKYADRLV 181 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++++ P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWIDAL Sbjct: 182 AFFKEQPDFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALL 241 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P+++ +HG+ Sbjct: 242 NYTTALGYGQTDHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIAHGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 302 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 361 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K +DG +P T D + + L + + M+ RAL Sbjct: 362 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDTELSQLIDAQLADYHKYMEAVDYPRAL 421 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 + ++++ ++Y D PW L K + D+A ++V+ +R +A L+Q F+ + + Sbjct: 422 EAIWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHLIQPFMMETSAA 481 Query: 473 IF 474 I Sbjct: 482 IM 483 >gi|320009832|gb|ADW04682.1| methionyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331] Length = 537 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 198/495 (40%), Positives = 298/495 (60%), Gaps = 10/495 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y+ST I Y N PH+GHAY + DVL R+HR G V + TGTDEHGQKI + A+ Sbjct: 17 FYVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANN 76 Query: 67 VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 VT + + D+ ++ + + L+I+ DDFIRTTEKRH D + + + DK IYKG Y Sbjct: 77 VTPQAWCDKLVEEAWKPLWEHLNIANDDFIRTTEKRHTDRVQEFVQDLFDKDQIYKGGYE 136 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + E Y ++ + DG H PV+ ++EE YFF+LS Y KL+ +Y ++P Sbjct: 137 GPYCVGCEEYKLPGDLIEAEDGTKLCPIHKKPVELLKEENYFFKLSEYGPKLMEFYAANP 196 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RNE+++FVK GL+DLS+SR TFDWG+ +P DP++++YVWIDAL NY T GY Sbjct: 197 DFIQPESARNEIVNFVKQGLQDLSISRSTFDWGVPVPWDPKHVIYVWIDALLNYATAVGY 256 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 N + F PA++H+IGKDILRFH++ WPA L++ LPLP KV ++G+++ GEK+S Sbjct: 257 GANQEKFDGTF-PANVHLIGKDILRFHSVIWPAMLMAQGLPLPGKVVANGWLMVGGEKMS 315 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS I P ++ GVDA R++ +R IA G DG + + R ++LAN GNL SR Sbjct: 316 KSNLTGIKPQDLTSHFGVDAYRWYFLRAIAYGSDGSFSWEDFSARYTSELANDYGNLASR 375 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSE 423 +M+ K +DG +P A +++ ++ +R + + +L + + V + Sbjct: 376 VAAMVGKYFDGALPEATAAGDAERAVQEGLARAVATADARIGEELDFQGGILAIFDFVKQ 435 Query: 424 VDRYFDAQKPWELKK-TNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 V+ Y Q+PW++ K T+P+ R + +LY E +R +A+LL + +P + K++D L Sbjct: 436 VNGYITEQEPWKVAKDTSPEGQARLAAILYTAAESLRGVAVLLNSVMPDTSQKLWDSL-- 493 Query: 480 ADENRCFQSLDQRLK 494 E DQR++ Sbjct: 494 GAEASLGALADQRVQ 508 >gi|291530000|emb|CBK95585.1| methionyl-tRNA synthetase [Eubacterium siraeum 70/3] Length = 642 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 190/485 (39%), Positives = 298/485 (61%), Gaps = 8/485 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I YP+ PHIGH Y + D +ARF R+ G DV+F TGTDEHGQKI A GV Sbjct: 6 YLTTPIYYPSGNPHIGHCYTTVACDTIARFKRMQGYDVMFLTGTDEHGQKIELKAAEKGV 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K +VD+ NF+ + + + ISYD FIRTT+ H +T + +++K+ +KG IYKG Y G Sbjct: 66 TPKEYVDEIVANFKRLWETMHISYDRFIRTTDDYHIETVQKIFRKLYEKGYIYKGTYKGK 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + V+ EE YF RLS + DK+ + + +++ Sbjct: 126 YCTPCESFWTESQL---VDGKCPDCGRE-VKEANEEAYFLRLSDFADKIEKFL-TETDYL 180 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R NE+++ F+K GL+DL +SR +F WGI + D ++++YVW+DAL+NY++ GY + Sbjct: 181 QPKSRVNEMVNNFIKPGLEDLCVSRTSFTWGIPVDFDSKHVVYVWVDALSNYISALGYGN 240 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 K+WPAD+H+ K+I+RFH+I WP L+ +LPLPK ++ HG+I G+K+SKS Sbjct: 241 EKYNDFEKYWPADMHMTAKEIVRFHSIVWPIILMMLDLPLPKHLYGHGWINFNGDKMSKS 300 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNV+DP + E GVDA+RY ++R++ G D + + + R+NADLAN +GNLVSR+V Sbjct: 301 KGNVVDPFVLCERYGVDAVRYQILRDMPYGSDCNFTNELMLTRINADLANDLGNLVSRTV 360 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +M K + G +PT A E D ++ + + + ++ +AL ++ ++S ++ Sbjct: 361 AMADKYFGGTLPTDRASDELDNQLIGMAQSLCDTVTPLIEQAQHSKALEEIFKVISRANK 420 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 Y D PW L K +N R +TVLY +E IR + LL F+P ++++ + E+ Sbjct: 421 YIDETAPWVLAKDESNNARLATVLYNLLETIRICSALLSPFMPATMPEVWEQIGAGAEDT 480 Query: 485 CFQSL 489 F L Sbjct: 481 AFDKL 485 >gi|218461098|ref|ZP_03501189.1| methionyl-tRNA synthetase [Rhizobium etli Kim 5] Length = 272 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 166/272 (61%), Positives = 218/272 (80%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ YI+TAI+YPN +PHIGHAYE+I D +AR+ RLDG DV F TGTDEHGQK+ + Sbjct: 1 MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGKDVFFLTGTDEHGQKMQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ + D+NS F+ MA +L+ S DDFIRTT++RHH+T R +WK ++D GDIY Sbjct: 61 TARAEGIEPQALADRNSGEFQAMATLLNASNDDFIRTTQERHHETSRNIWKLMADNGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y+GWYS+RDEAYY ++E ADG Y Q PV+W+EE YFF+LS YQ+KLL++Y Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQEKLLAHY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T Sbjct: 181 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYIT 240 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHA 272 TGY+++ +G +AK+WPAD+H+IGKDI+RFHA Sbjct: 241 ATGYIEDRNGPRAKYWPADVHIIGKDIIRFHA 272 >gi|320106556|ref|YP_004182146.1| methionyl-tRNA synthetase [Terriglobus saanensis SP1PR4] gi|319925077|gb|ADV82152.1| methionyl-tRNA synthetase [Terriglobus saanensis SP1PR4] Length = 709 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 209/559 (37%), Positives = 309/559 (55%), Gaps = 65/559 (11%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++K Y++T I Y NA+PHIGHAY + AD +AR RL G D F TGTDEHGQKI ++A Sbjct: 4 KKDKFYLTTPIYYVNARPHIGHAYTTLTADTIARRKRLQGFDTYFLTGTDEHGQKIQRSA 63 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + AG+ + F DQ S FR + D + ++YD +IRTT++ H + L+ + ++G I Sbjct: 64 EAAGIPPQQFADQVSEQFRALWDRMGVTYDQYIRTTDEAHKRGAQKLFTTLYERGFIELR 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y+G YS+ +E + G DG+ + + EE +FF+LS +Q +L+ S Sbjct: 124 SYTGQYSIGEEMFVEGPPGTIGPDGKL-------TETVTEENFFFKLSEFQTQLIDLIGS 176 Query: 183 HPEFILPIERRNEVISFVK--------------------SGLKDLSLSRKTFDWGIKIPD 222 + I P R+NEV+SF++ L+DLS+SR +F WGI +P+ Sbjct: 177 NELEITPEARKNEVLSFLRGNVNDTDATAVSAAGHKYIPGALRDLSISRSSFTWGIPVPE 236 Query: 223 ------DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAI 273 + ++++YVW+DAL NY+T GY + AKF WPADLH++GK+I RFH + Sbjct: 237 IVAGLTEQKHVIYVWLDALANYMTAVGYGSDDPADIAKFEKYWPADLHIVGKEITRFHCV 296 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG------------ 321 YWPAFLL+A LPLPKK+ +HG++L + K+SKS GN++ ++E G Sbjct: 297 YWPAFLLAAGLPLPKKIVAHGWLLFEESKMSKSRGNIVRSETILEGFGSIKPDLPKAEQD 356 Query: 322 ---VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 D LRYFL+REI G+DG + D + R NADLANG GNLVSR++SM+ K++ G++P Sbjct: 357 LFAADVLRYFLLREIPFGQDGSFSFDAMVTRYNADLANGYGNLVSRTLSMVEKNFGGVLP 416 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 P SDE + I + Q RA + +++ DR+F PW+L K Sbjct: 417 AP-----SDEIPNGEFETLAALIDADFDTQTFTRATTSIAQMITNADRFFSEAAPWKLAK 471 Query: 439 TNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR---- 492 R VLY + E IR + LL +P +++ L + D + ++ + Sbjct: 472 EEASREKFGDVLYRSAESIRTITALLYPILPYATAQVWRQLGLGDIEQAAKNGELNNLHW 531 Query: 493 --LKPGFMLHKTFDPIFPR 509 LKPG L PIFPR Sbjct: 532 GGLKPGTKLGP-LAPIFPR 549 >gi|291556883|emb|CBL34000.1| methionyl-tRNA synthetase [Eubacterium siraeum V10Sc8a] Length = 642 Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust. Identities = 190/485 (39%), Positives = 298/485 (61%), Gaps = 8/485 (1%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I YP+ PHIGH Y + D +ARF R+ G DV+F TGTDEHGQKI A GV Sbjct: 6 YLTTPIYYPSGNPHIGHCYTTVACDTIARFKRMQGYDVMFLTGTDEHGQKIELKAAEKGV 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K +VD+ NF+ + + + ISYD FIRTT+ H +T + ++KK+ +KG IYKG Y G Sbjct: 66 TPKEYVDEIVANFKRLWETMHISYDRFIRTTDDYHIETVQKIFKKLYEKGYIYKGTYKGK 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E+++ + ++ DG+ + V+ EE YF RLS + DK+ + + +++ Sbjct: 126 YCTPCESFWTESQL---VDGKCPDCGRE-VKEANEEAYFLRLSDFADKIEKFL-TETDYL 180 Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 P R NE+++ F+K GL+DL +SR +F WGI + D ++++YVW+DAL+NY++ GY + Sbjct: 181 QPKSRVNEMVNNFIKPGLEDLCVSRTSFTWGIPVDFDSKHVVYVWVDALSNYISALGYGN 240 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 K+WPAD+H+ K+I+RFH+I WP L+ +LPLPK ++ HG+I G+K+SKS Sbjct: 241 EKYNDFEKYWPADMHMTAKEIVRFHSIVWPIILMMLDLPLPKHLYGHGWINFNGDKMSKS 300 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNV+DP + E GVDA+RY ++R++ G D + + + R+NADLAN +GNLVSR+V Sbjct: 301 KGNVVDPFVLCERYGVDAVRYQILRDMPYGSDCNFTNELMLTRINADLANDLGNLVSRTV 360 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +M K + G +PT E D+ ++ + + + ++ +AL ++ ++S ++ Sbjct: 361 AMADKYFGGTLPTDRVSDELDDQLIGMAQSLCDTVTPLIEQAQHSKALEEIFKVISRANK 420 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 Y D PW L K +N R +TVLY +E IR + LL F+P ++++ + E+ Sbjct: 421 YIDETAPWVLAKDESNNARLATVLYNLLETIRICSALLSPFMPATMPEVWEQIGAGAEDT 480 Query: 485 CFQSL 489 F L Sbjct: 481 AFDKL 485 >gi|325182837|emb|CCA17292.1| methionyltRNA synthetase of possible bacterial origi (ISS) putative [Albugo laibachii Nc14] Length = 741 Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust. Identities = 196/478 (41%), Positives = 302/478 (63%), Gaps = 20/478 (4%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 EK Y++TAI Y N QPH+GHAYE + ADV+AR+HR+ G +V F TGTDEHGQKIA+ A+ Sbjct: 49 EKFYLTTAIHYTNGQPHMGHAYENVTADVIARYHRIFGRNVYFLTGTDEHGQKIAQTAEA 108 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ K D+ + FR + L++S FIRTT ++H + L+++ +KGDIY G Y Sbjct: 109 LGIAPKELCDKYAAIFRQLTLDLNMSNSSFIRTTSEKHKVFAQWLFQRALNKGDIYLGTY 168 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY++R+E + + E + +Y + P++ M EE YFFR+S YQ +L+ ++ +H Sbjct: 169 EGWYNVREEVFVTEVEAQQ---SEYKDPVSGIPLKKMREESYFFRMSKYQQRLVDHFHAH 225 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 PEF+ P RR E++ ++ L+DLS SR TF GI +P+D +++YVW DAL NYL+ G Sbjct: 226 PEFLQPETRRQEIMKRLEEPLQDLSSSRNTFSHGIPLPNDSNHVLYVWFDALANYLSAIG 285 Query: 244 YLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GE 301 + PD +AK +WPA++H+IGKDI FH + WP L+S +PLPK+VF+HGF+ K G Sbjct: 286 F---PDQVEAKTYWPANVHIIGKDITWFHCVIWPCILMSTEIPLPKRVFAHGFVNAKDGM 342 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS+GNV+DP +++ + G+++ RYFLVR G+D + ++ L N++LA+ +GNL Sbjct: 343 KMSKSIGNVVDPYDIMNKFGLESFRYFLVRSARYGQDWPFSENDLINIHNSELADTLGNL 402 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 V R+V++ K DG++P T S + + +L + + ++ + A+ VI + Sbjct: 403 VHRTVNICKKYSDGVVPN----TLSPDRPFDFIT-LLSQSEDAYRDFALQSAVILVIEAL 457 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYV--TVEVIRQLAILLQAFVPKLANKIFDIL 477 +V+RY + PW + D AS ++ V +E I LA L F+PK + IF+ L Sbjct: 458 RDVNRYLTDKAPWHMT----DSASRLIVVRTCLEAIYLLAHFLAPFIPKTSETIFEKL 511 >gi|209558897|ref|YP_002285369.1| methionyl-tRNA synthetase [Streptococcus pyogenes NZ131] gi|209540098|gb|ACI60674.1| Methionyl-tRNA synthetase [Streptococcus pyogenes NZ131] Length = 666 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 196/518 (37%), Positives = 311/518 (60%), Gaps = 11/518 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI A+ Sbjct: 3 KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG++ + +VD +++ + + +LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 63 EAGISPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + EV++ DGQ + V+W+ EE YF RLS Y D+L+ Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++++ +FI P R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL Sbjct: 183 AFFKERSDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P ++ +HG+ Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K +DG +P T D + + L + ++M+ RAL Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 V ++++ ++Y D PW L K + D+A ++V+ +R +A ++Q F+ + + Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482 Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I L +A + + PIFPR Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520 >gi|22298292|ref|NP_681539.1| methionyl-tRNA synthetase [Thermosynechococcus elongatus BP-1] gi|25009348|sp|P59081|SYM_THEEB RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|22294471|dbj|BAC08301.1| methionyl-tRNA synthetase [Thermosynechococcus elongatus BP-1] Length = 529 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 189/474 (39%), Positives = 281/474 (59%), Gaps = 7/474 (1%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y NA PHIG AY I ADVLARF+RL G V F TGTDEHGQKI + AQ G++ Sbjct: 7 LTTPLYYVNALPHIGSAYTTIAADVLARFYRLQGYQVRFITGTDEHGQKIERTAQQRGLS 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D+ + F+ + L+I YD F RTT RHH ++++ D GDIY G GWY Sbjct: 67 PQAHCDEIAAGFQALWQQLNIHYDRFSRTTSPRHHAIVNEFFQRVWDNGDIYLGQQQGWY 126 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + + E+ +G + + V+W +E YFFRLS YQ LL +Y HP+F+ Sbjct: 127 CVECEEFKEERELLEGRRCPIH--VNRTVEWRDERNYFFRLSKYQQALLDHYAEHPDFVQ 184 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT-GYLDN 247 P RRNEV+SF++ GL+D S+SR WG +P DP+ +YVW DAL Y+T D Sbjct: 185 PPSRRNEVLSFIERGLQDFSISRVNLAWGFPVPTDPEQTLYVWFDALLGYVTALLEPEDE 244 Query: 248 PDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 P + A +WP +LH+IGKDILRFH I WPA L+SA LPLP+++F HGF+ G+K+ K Sbjct: 245 PTLANALKTWWPINLHIIGKDILRFHGISWPAMLMSAGLPLPEQIFVHGFLTKDGQKMGK 304 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGN +DP ++ + G DA+RY+ ++E+ G+DG + + +NADLAN +GNL++R+ Sbjct: 305 SLGNTLDPFALVAQYGADAVRYYFMKEVEFGRDGDFSETRFVTILNADLANDLGNLLNRT 364 Query: 366 VSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + M K DG +P GA + + + + Q + + H Q ++L Sbjct: 365 LKMAWKYTDGKVPNVQGAAIPREHPLRQLAEHLSQTYGQGYRQLAFHEVCQQALTLARAG 424 Query: 425 DRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +++ D + PW+ + A + +LY +E +R +A +L +P+L+ I+ L Sbjct: 425 NKFLDEEAPWKRYRAGETAAVAEILYCVLESVRLVAYVLAPIIPQLSEAIYGQL 478 >gi|171780192|ref|ZP_02921096.1| hypothetical protein STRINF_01980 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281540|gb|EDT46975.1| hypothetical protein STRINF_01980 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 667 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 198/522 (37%), Positives = 304/522 (58%), Gaps = 12/522 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ YI+T I YP+ + HIG AY I DVLAR+ R+ DV + TG DEHGQKI + Sbjct: 1 MTSKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + + + + +LDISYD FIRTT+ H +++K+ + DIY Sbjct: 61 KAEEAGITPQAYVDGMAADVKKLWKMLDISYDKFIRTTDDYHEKVVAEVFEKLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + +EV++ +G+ + V+W+ EE YF RL Y D Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++ +HP+FI P R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID Sbjct: 181 RLVEFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291 AL NY T GY + FW H++GKDILRFH+IYWP L+ ++ LP ++ Sbjct: 241 ALLNYATALGYGQEEHANFDNFWNEGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPDRLI 300 Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 +HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRIN 360 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLI 410 +LAN +GNL++R+V+MI K + G +P T D + V L E + M Sbjct: 361 YELANDLGNLLNRTVAMINKYFGGDVPAYVKNVTAFDADLADVVEEKLAEYHKQMNAVDY 420 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPK 468 RAL V S++S ++Y D PW L K + D + V+ +R +A L+Q F+ Sbjct: 421 PRALDAVWSIISRTNKYIDETAPWVLAKDDAKRDELAAVMAHLAASLRVVAHLIQPFMMT 480 Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 +N I + L + + G + PIFPR Sbjct: 481 TSNTIMEQLGLGSDFDLENLTLAGFPEGVKVVAKGTPIFPRL 522 >gi|67921186|ref|ZP_00514705.1| Methionyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501] gi|67857303|gb|EAM52543.1| Methionyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501] Length = 535 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 195/489 (39%), Positives = 287/489 (58%), Gaps = 14/489 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K ++T + Y N PHIG AY IIADV+AR RL G +VL TGTDEHGQKI + A+ Sbjct: 9 KKFALTTPLYYVNGVPHIGSAYTTIIADVIARHKRLIGDEVLLITGTDEHGQKIQRTAEE 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + D+ +F ++ L+I YD F RTT +H + ++++ + GDIY Sbjct: 69 KGLAPQKHCDEIVSSFEELWQKLEIQYDRFSRTTASKHEVIVKEFFERVWENGDIYLAQQ 128 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY + E + E+ + DG + +W +EE YFF+LS YQ KL YE +P Sbjct: 129 QGWYCVACEEFKEKRELLE--DGCCPIHTNKKAEWRDEENYFFKLSKYQTKLEELYEKNP 186 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +FI P RRNE+++FV GL+D S+SR +WG IP DP + +YVW DAL Y+T Sbjct: 187 QFIQPESRRNEILNFVNQGLQDFSISRVNLEWGFPIPKDPSHTIYVWFDALLGYVTA--- 243 Query: 245 LDNPDGSK------AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 L P+ + +WP +LH+IGKDILRFHAIYWPA L+SA LPLP KVF HGF+ Sbjct: 244 LLEPEAEPTLNNALSTWWPINLHLIGKDILRFHAIYWPAMLMSAELPLPDKVFGHGFLTK 303 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 G+K+ K+LGN +DP ++++ G DA+RY+ ++EI CGKDG +++ +NADLAN + Sbjct: 304 DGQKMGKTLGNTLDPFALVDKYGADAVRYYFLKEIECGKDGDFNETRFVNILNADLANDL 363 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE-IRENMQNQLIHRALAQV 417 GNL++R++ M K G +P A E L L E + + + + ++ Sbjct: 364 GNLLNRTLGMTKKYCKGSLPELTAAELPQEHPLKTIGLTLGEKVIKAYETLKFNEGCEEI 423 Query: 418 ISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 ++L+ +++ D Q PW L K+ +LY +E +R A LL +P L++KI++ Sbjct: 424 LTLIRAGNKFIDEQAPWRLFKEGKQAEVEQILYGVLESVRLAAYLLAPIIPNLSSKIYEQ 483 Query: 477 L-FVADENR 484 L F D N+ Sbjct: 484 LGFSVDFNQ 492 >gi|306831942|ref|ZP_07465097.1| methionine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425868|gb|EFM28985.1| methionine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 667 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 198/525 (37%), Positives = 309/525 (58%), Gaps = 18/525 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ YI+T I YP+ + HIG AY I DVLAR+ R+ +V + TG DEHGQKI + Sbjct: 1 MTSKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNHEVFYLTGLDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + + + + ++L+ISYD FIRTT+ H +++K+ + DIY Sbjct: 61 KAEEAGITPQAYVDGMAADVKKLWEMLEISYDKFIRTTDDYHEKVVADVFEKLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + +EV++ +G+ + V+W+ EE YF RL Y D Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++ +HP+FI P R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID Sbjct: 181 RLVEFFHTHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291 AL NY T GY + KFW H++GKDILRFH+IYWP L+ ++ LP ++ Sbjct: 241 ALLNYATALGYGQEEHANFDKFWNEGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPDRLI 300 Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 +HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRIN 360 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQN 407 +LAN +GNL++R+V+MI K + G +P A+ E+ D + V L E + M Sbjct: 361 YELANDLGNLLNRTVAMINKYFGGDVP---AYVENVTAFDADLAGVVEEKLAEYHKQMNA 417 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAF 465 RAL V S++S ++Y D PW L K + D + V+ +R +A L+Q F Sbjct: 418 VDYPRALDAVWSVISRTNKYIDETAPWVLAKDDAKRDELAAVMAHLAASLRVVAHLIQPF 477 Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + +N I + L + + G + PIFPR Sbjct: 478 MMTTSNAIMEQLGLGSDFDLENLTLADFPEGVKVVAKGTPIFPRL 522 >gi|288905923|ref|YP_003431145.1| Methionyl-tRNA synthetase [Streptococcus gallolyticus UCN34] gi|325978889|ref|YP_004288605.1| methionyl-tRNA synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732649|emb|CBI14221.1| Methionyl-tRNA synthetase [Streptococcus gallolyticus UCN34] gi|325178817|emb|CBZ48861.1| Methionyl-tRNA synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 667 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 198/525 (37%), Positives = 309/525 (58%), Gaps = 18/525 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ YI+T I YP+ + HIG AY I DVLAR+ R+ +V + TG DEHGQKI + Sbjct: 1 MTSKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNHEVFYLTGLDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + + + + ++L+ISYD FIRTT+ H +++K+ + DIY Sbjct: 61 KAEEAGITPQAYVDGMAADVKKLWEMLEISYDKFIRTTDDYHEKVVADVFEKLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + +EV++ +G+ + V+W+ EE YF RL Y D Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++ +HP+FI P R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID Sbjct: 181 RLVEFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291 AL NY T GY + KFW H++GKDILRFH+IYWP L+ ++ LP ++ Sbjct: 241 ALLNYATALGYGQEEHANFDKFWNEGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPDRLI 300 Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 +HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRIN 360 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQN 407 +LAN +GNL++R+V+MI K + G +P A+ E+ D + V L E + M Sbjct: 361 YELANDLGNLLNRTVAMINKYFGGDVP---AYVENVTAFDADLAGVVEEKLAEYHKQMNA 417 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAF 465 RAL V S++S ++Y D PW L K + D + V+ +R +A L+Q F Sbjct: 418 VDYPRALDAVWSVISRTNKYIDETAPWVLAKDDAKRDELAAVMAHLAASLRVVAHLIQPF 477 Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + +N I + L + + G + PIFPR Sbjct: 478 MMTTSNAIMEQLGLGSDFDLENLTLADFPEGVKVVAKGTPIFPRL 522 >gi|119487032|ref|ZP_01620904.1| methionine--tRNA ligase [Lyngbya sp. PCC 8106] gi|119455961|gb|EAW37095.1| methionine--tRNA ligase [Lyngbya sp. PCC 8106] Length = 534 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 198/486 (40%), Positives = 286/486 (58%), Gaps = 16/486 (3%) Query: 2 KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ E L+ ++T + Y N PH+G AY + AD +ARF RL G VL TGTDEHGQKI + Sbjct: 4 KKTENLFTLTTPLYYVNDVPHVGSAYTTMAADAVARFQRLQGKSVLLITGTDEHGQKIER 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A++ + + DQ +F + LDI YD F RTT+ RH + + ++ D+ DIY Sbjct: 64 TAESLNRSPQEHCDQIVSSFESLWHKLDIQYDRFSRTTDSRHAAIVKEFFGRVWDQEDIY 123 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSY 179 GWY + E + + E+ D +Y N V+W +E+ YFFRLS YQ +L + Sbjct: 124 LSQQQGWYCVACEEFKEEREL---IDEKYCPIHTNKQVEWRDEQNYFFRLSKYQKQLEAL 180 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 Y+ P+FI P RRNEV++FV GL+D S+SR DWG +P DP +YVW DAL Y+ Sbjct: 181 YQEQPDFIQPESRRNEVLNFVSQGLQDFSISRLNVDWGFPVPVDPNQTIYVWFDALLGYV 240 Query: 240 TTTGYLDNPD------GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 T L +PD + +K WP LH+IGKDILRFHA+YWPA L+SA++PLP ++F H Sbjct: 241 TA---LLDPDREATLENALSKGWPISLHLIGKDILRFHAVYWPAMLMSADIPLPGRIFGH 297 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 GF+ G+K+ KSLGN +DP+E++ + G DA+RY+ ++EI G+DG ++ VNAD Sbjct: 298 GFLTKDGKKMGKSLGNTLDPVELVRQFGSDAVRYYFLKEIEFGQDGDFNLTRFINTVNAD 357 Query: 354 LANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R++ M K ++G IP GA D + S + Q + + + Sbjct: 358 LANDLGNLLNRTLRMAHKYFEGRIPHVSGAVIPEDNPLKSYGVTLGQTVAQGYERLAFSE 417 Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 +++LV ++Y D Q PW L K+ D +VLY +E +R A LL P L+N Sbjct: 418 VCDAILNLVQAGNKYIDEQAPWALYKQEKLDLVESVLYSVLESVRLAAYLLSPITPNLSN 477 Query: 472 KIFDIL 477 I+ L Sbjct: 478 GIYHQL 483 >gi|242279644|ref|YP_002991773.1| methionyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] gi|242122538|gb|ACS80234.1| methionyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] Length = 646 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 210/516 (40%), Positives = 310/516 (60%), Gaps = 20/516 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + +I+T I Y NA+PH+GHAY I+AD + RFH+L G + F TGTDEHG KI +AA+ Sbjct: 2 DSFFITTPIYYVNAKPHLGHAYTTILADSMNRFHKLLGDETFFLTGTDEHGDKIVQAAEK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G T + +VD+ S F + L I DDFIRTT++RH + + +K+ DKGDIY G Y Sbjct: 62 GGQTPREYVDEISSLFSGLWPGLQIENDDFIRTTQERHIKCVQEVLQKVYDKGDIYFGEY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYESH 183 G Y E +Y + E+ G QH V +++ E+ YFF++S YQD L+++ + Sbjct: 122 GGHYCFGCERFYTEKELVDGK-----CPQHETVPEYIAEKNYFFKMSKYQDWLIAHINDN 176 Query: 184 PEFILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 PEFI P RNEV+S +KSG L+DL +SR +WGI++P D +++ YVW DAL NY+T Sbjct: 177 PEFIRPERYRNEVLSLLKSGELEDLCISRPKSRLEWGIELPFDDKFVTYVWFDALINYIT 236 Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 Y PDG K KFWP H++ KDIL+ HAI+WP L +A + + + HG+ L K Sbjct: 237 ALEY---PDGEKYEKFWPKANHLVAKDILKPHAIFWPTMLKAAEIEPYQHLNVHGYWLIK 293 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKSLGNV+ P+E+ E+ GV+A RYFL+RE+ G D + ++ L R+NADLAN +G Sbjct: 294 DTKMSKSLGNVVSPLEMAEKYGVNAFRYFLLREMVFGNDSSFSEEALVGRLNADLANDLG 353 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL SR++SM K ++G +P G + D I S+ + + E + N + R L + Sbjct: 354 NLFSRTLSMTHKYFEGKVPAQGDEADEDCEIKSLGRKAMAEFQNNFIDAKFSRGLEGLWE 413 Query: 420 LVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI---FD 475 LV +++Y D +PW L K+ N R TV+YV +E +R++A+ L +P+ + + Sbjct: 414 LVRGLNKYIDTTQPWTLYKEENMSRLGTVMYVLLENMRKIAVHLWPVMPEASEMMLGQLG 473 Query: 476 ILFVADENRCFQSLD--QRLKPGFMLHKTFDPIFPR 509 I F ++ +D L PG + K + +FPR Sbjct: 474 IQFAPEKVNLQGEIDVWGLLDPGTEVAKKSN-LFPR 508 >gi|118474589|ref|YP_891971.1| methionyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40] gi|118413815|gb|ABK82235.1| methionyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40] Length = 632 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 207/512 (40%), Positives = 315/512 (61%), Gaps = 19/512 (3%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K +I+T I Y N PHIGHAY IIAD +AR++RL G D F TGTDEHGQKI +AA+ Sbjct: 2 KKFITTPIYYVNDVPHIGHAYTTIIADTMARYYRLVGYDTFFLTGTDEHGQKIEEAAKAH 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 T K + D+ S FR + D +ISYD FIRTT+ H T + ++ K+ +KGDIYKG Y Sbjct: 62 CKTPKEYADEVSAKFRSLWDEFEISYDHFIRTTDDYHKFTAQNVFLKMYEKGDIYKGEYE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y + E ++ +++ D ++ + ++EE YFF+LS YQDKLL +YE Sbjct: 122 GNYCVSCETFFPQNQL---IDDEFCPDCGKKTRIVKEESYFFKLSDYQDKLLKWYEKG-N 177 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTT 242 ILP ++NEVISFVK GLKDLS++R +F+WG+K+P ++P+++MYVW+DAL NYL+ Sbjct: 178 CILPKGKKNEVISFVKGGLKDLSITRTSFEWGVKLPSSLNEPRHVMYVWLDALINYLSAL 237 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY D + +W +H++GKDILRFHA+YWPAFL+S LPLP V +HG+ G+K Sbjct: 238 GY--TTDNKRMDYWNDTMHLVGKDILRFHAVYWPAFLMSLELPLPTSVAAHGWWTRDGKK 295 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNV+DP V G++A RYFL+RE+ G+DG + + L R+N++L+N +GNL+ Sbjct: 296 MSKSIGNVVDPRAVANAYGLEAFRYFLLREVPFGQDGDFSQKALIDRINSELSNDLGNLL 355 Query: 363 SRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 SR V M K + I + + ES + + ++ I E N+ + L +V+S Sbjct: 356 SRIVGMSSKYSNYEINSQNVTKLYLNELESAKTHLDQAIEAINEVATNRYLEE-LWKVLS 414 Query: 420 LV-SEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L + V +Y +PW L K+ D A+ ++ + ++ ++A+LL +PK ++KI L Sbjct: 415 LANASVAKY----EPWNLIKEGKTDEANALVALVANLLAKVAVLLSPAMPKSSDKIAKTL 470 Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 + + + + + + + +P+F + Sbjct: 471 GFEINTKTYNDIILKNELLNLKSSSTEPLFTK 502 >gi|94989852|ref|YP_597952.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10270] gi|94543360|gb|ABF33408.1| Methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10270] Length = 666 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 196/518 (37%), Positives = 310/518 (59%), Gaps = 11/518 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI A+ Sbjct: 3 KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+ + +VD +++ + + +LDISYD FIRTT+ H + +++K+ + DIY Sbjct: 63 EAGIKPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLDE 122 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + EV++ DGQ + V+W+ EE YF RLS Y D+L+ Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++++ P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P ++ +HG+ Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K +DG +P T D + + L + ++M+ RAL Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 V ++++ ++Y D PW L K + D+A ++V+ +R +A ++Q F+ + + Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482 Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I L +A + + PIFPR Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520 >gi|303326810|ref|ZP_07357252.1| methionine--tRNA ligase [Desulfovibrio sp. 3_1_syn3] gi|302862798|gb|EFL85730.1| methionine--tRNA ligase [Desulfovibrio sp. 3_1_syn3] Length = 665 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 197/478 (41%), Positives = 294/478 (61%), Gaps = 13/478 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + +I+T I Y NA PH+GHAY I+AD LARFH+L G D LF TGTDEHG KI +AA+ Sbjct: 2 KSFFITTPIYYVNANPHLGHAYTTIVADSLARFHKLLGEDTLFLTGTDEHGDKIVQAAEK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G T K FVD S FR + L I+ D F+RTT++ H T + +K+ D GDIY G + Sbjct: 62 QGQTPKEFVDDISGRFRALWPQLGIANDRFVRTTDEAHKRTVQDFLQKVYDAGDIYFGEF 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y E +Y + E+ G Q+ +++ E+ YFFR+S Y L Y HP Sbjct: 122 GGHYCYGCERFYTEKELENGLCPQHLTKP----EFISEKNYFFRMSKYLPWLREYISQHP 177 Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSR-KT-FDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +FI P R+EV++ ++SG L+DL +SR KT WGI++P D Y+ YVW DAL NY++ Sbjct: 178 DFIRPERYRSEVLAMLESGALEDLCISRPKTRLTWGIELPFDKNYVCYVWFDALINYISA 237 Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 G+ PDG++ ++WP + H++ KDIL+ HA++WP L +A LPL K + HG+ L + Sbjct: 238 LGW---PDGAEYVRYWPGE-HLVAKDILKPHAVFWPTMLKAAGLPLYKHLNVHGYWLSRD 293 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKSLGNV+DP+E G+DA RYFL+RE+ G D + ++ L R+NADLAN +GN Sbjct: 294 TKMSKSLGNVVDPLETGRRFGLDAFRYFLLREMHFGSDASFSEESLIGRINADLANDLGN 353 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SR +SM K + +P P DE+++ +C+ ++ + N +AL + L Sbjct: 354 LFSRVLSMTAKYFGSCVPQPKQREPEDEAMVELCATAMRNFSQLFGNVQFAQALESLWEL 413 Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V +++Y D+Q PW L K+ N +R +TV+Y+ + +R++A+ L +P + ++ + L Sbjct: 414 VRALNKYVDSQAPWALHKQGNMERLATVMYILLAAMRKVALCLWPVMPAASRRMLEQL 471 >gi|78356637|ref|YP_388086.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219042|gb|ABB38391.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 642 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 203/495 (41%), Positives = 293/495 (59%), Gaps = 17/495 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+T I Y NA+PH+GHAY I+AD L RFH L G F TGTDEHG KI +AA+ Sbjct: 2 QPFYITTPIYYVNAKPHLGHAYTTIVADALRRFHTLLGKKTFFLTGTDEHGDKIVQAAEK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G T + +VD S FRD+ + I+YD F+RTT++ H + + +K+ D GDIY G Y Sbjct: 62 NGCTPQEYVDSISATFRDLWPSMGITYDRFVRTTDESHKKCVQAVLQKVYDSGDIYFGEY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y E +Y + E+ G Q+ Q P +++ E+ YFFR+S YQD L Y +P Sbjct: 122 GGHYCYGCERFYTEKELENGLCPQH---QVKP-EYIAEKNYFFRMSKYQDWLRQYILDNP 177 Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +FI P RNEV+S + SG L+DL +SR WG+++P D Y+ YVW DAL NY++ Sbjct: 178 DFIRPERYRNEVLSLLDSGALEDLCISRPKSRLSWGVELPFDTDYVCYVWFDALLNYVSA 237 Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 L+ PDG + FWP H++ KDIL+ HA++WP L +A + HG+ L + Sbjct: 238 ---LNWPDGEEFTTFWPGVQHLVAKDILKPHAVFWPTMLKAAGFEPYNNLNVHGYWLVRD 294 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKSLGNVI+P+E+ G+ A RYFL+RE+ G D + ++ L R+NADLAN +GN Sbjct: 295 TKMSKSLGNVIEPLEMAGRYGLSAFRYFLLREMHFGSDASFSEEALVARLNADLANDLGN 354 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SR +SM K +DG++P+P A+T DE I+++ + + AL + L Sbjct: 355 LFSRVLSMTGKYFDGVVPSPAAYTADDEDIINLAKDACRNYVRLFERVRFSNALESLWEL 414 Query: 421 VSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 V +++Y D+ PW L KT + R TVLYV +E +R++A+ L +P+ + + L V Sbjct: 415 VRALNKYVDSSAPWTLYKTGDTARLGTVLYVLLECMRKVAVNLWPVMPEASEAMLGQLHV 474 Query: 480 ADENRCFQSLDQRLK 494 CF S RL+ Sbjct: 475 -----CFDSAGTRLQ 484 >gi|257784887|ref|YP_003180104.1| methionyl-tRNA synthetase [Atopobium parvulum DSM 20469] gi|257473394|gb|ACV51513.1| methionyl-tRNA synthetase [Atopobium parvulum DSM 20469] Length = 536 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 200/527 (37%), Positives = 313/527 (59%), Gaps = 26/527 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +I+T I Y NA+PH+G AY ++ D+ ARF R G DV F TG DEHG+K+A AA + G+ Sbjct: 9 FITTPIYYVNAKPHLGTAYCTLLCDIQARFRRAAGYDVFFLTGMDEHGEKVALAAADHGL 68 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + + D F+ + + L+ISYDDFIRTT++RH + LW+++ + G IYKG Y GW Sbjct: 69 SPQAWCDSQVPFFKGLYEELNISYDDFIRTTDERHVKAVQYLWERMREAGFIYKGSYDGW 128 Query: 128 YSLRDEAYYNDDEVYK-----GADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y + +E ++ + +V K G G + H ++ + EE +FF+LSA+QDKLL Y Sbjct: 129 YCIHEETFFTETQVEKADEEAGCKGAHLCPDCHRELERVSEESWFFKLSAFQDKLLELYA 188 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HP+FI P R NEV SFV+SGL+D+S+SR +FDWGI +P D ++ YVW DAL NY T Sbjct: 189 EHPDFIEPDFRANEVRSFVESGLQDISVSRTSFDWGIPVPFDESHVTYVWFDALLNYYTA 248 Query: 242 TGYLDN-PDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 GY D+ P+ + + +FWPA +HV+GKDI+RFH + WPA L++ +P+ +F+HGF+ Sbjct: 249 VGYGDDSPEAAAMRKRFWPAQMHVVGKDIIRFHCVIWPAMLMALGEAVPEHIFAHGFLNV 308 Query: 299 KG------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 + EK+SKS GN I P +V++ +GV+ RY+ + ++ G+D + +++ NA Sbjct: 309 RNSETGVVEKMSKSRGNAIAPKDVLDLLGVEGYRYYFMTDVTPGEDSGISFERMEQVYNA 368 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN GNLVSR+++M K ++G+ PT G+ +D + + + M+ Sbjct: 369 DLANSWGNLVSRALNMSDKYFEGVTPTFDGSSVAADHPLRKLAEGIYDRYATCMEKMDYV 428 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPK 468 A ++ LV + Y + PW + K +P+RA + ++Y +E IR A L F+P Sbjct: 429 GAKNIIMELVHAANHYIEDAAPWTVAK-DPERAAELAEIIYTLLESIRICAHLFMPFMPT 487 Query: 469 LANKI-----FDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + ++ D + + + + RL+ G + K D +FPR Sbjct: 488 TSTEVLRRMSLDEVEINSTDARSECTWGRLQGGLAVSKG-DALFPRL 533 >gi|296876924|ref|ZP_06900969.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 15912] gi|296432055|gb|EFH17857.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 15912] Length = 663 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 203/524 (38%), Positives = 314/524 (59%), Gaps = 25/524 (4%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+T I YP+ + HIG AY I DVLAR+ R+ DV + TG DEHGQKI + A+ Sbjct: 3 KSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY G Y Sbjct: 63 AGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEY 122 Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLS 178 SGWYS+ DE ++ + EVY+ +G+ + V+W+ EE YF RLS YQD+L+ Sbjct: 123 SGWYSVSDEEFFTESQLAEVYRDENGKVIGGVAPSGHEVEWVSEESYFLRLSKYQDRLVE 182 Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237 +++S P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWIDAL N Sbjct: 183 FFKSQPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALLN 242 Query: 238 YLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 Y+T GY + + KFW + H++GKDILRFH+IYWP L+ ++ LP+++ +HG+ Sbjct: 243 YVTALGYGQDDHENFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIAHGWF 302 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 + K K+SKS GNVI P ++E G+D LRY+L+R + G DG + + R N +LAN Sbjct: 303 VMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARNNYELAN 362 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHR 412 +GNL++R+V+MI K + G +P A+ E+ D + V + E + M R Sbjct: 363 DLGNLLNRTVAMINKYFGGQVP---AYVENVTAFDADLAKVVEESIAEYHKQMNAVDYPR 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT--VEVIRQLAILLQAFVPKLA 470 AL V +++S ++Y D PW L K + D+ V + +R +A L+Q F+ + Sbjct: 420 ALEAVWNIISRTNKYIDETAPWVLAKEDGDKEQLVAVMAHLAASLRVVAHLIQPFMMNTS 479 Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510 N I + L + + F L+ GF + T PIFPR Sbjct: 480 NAIMEQLGL---DLDF-DLENLTLAGFPENVTVVAKGTPIFPRL 519 >gi|39938719|ref|NP_950485.1| methionyl-tRNA synthetase [Onion yellows phytoplasma OY-M] gi|39721828|dbj|BAD04318.1| methionyl-tRNA synthetase [Onion yellows phytoplasma OY-M] Length = 520 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 206/497 (41%), Positives = 306/497 (61%), Gaps = 20/497 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ K ++STAIAY + PHIG+ YE I+AD +ARF RL+G DVLF TGTDEHGQKIA A Sbjct: 7 QKPKFFLSTAIAYASGIPHIGNVYESILADAIARFKRLEGFDVLFQTGTDEHGQKIAAKA 66 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G + +VDQ S + + D++ +SYD F +TT H T + ++ K+ +GDIY G Sbjct: 67 LQQGKNPQEYVDQISLEIKRIYDLMQVSYDKFAKTTNPHHKQTVQAIFYKLWQQGDIYLG 126 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G YS+ +E+Y ++ DG+ +N + P+ + EE YFF+LS YQ +LL Y E+ Sbjct: 127 KYQGLYSVAEESYVAAKDL---IDGKTFNGE-TPI-LISEETYFFKLSKYQAQLLQYLEN 181 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 +P I P +R E+++ +K L DLS+SR +F WGI +P DP++++YVWIDAL+NYLT Sbjct: 182 NPSLIKPDAQRKELLNLLKEPLADLSVSRTSFKWGIPVPFDPKHVIYVWIDALSNYLTGL 241 Query: 243 GYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 Y NP ++F WP D+HVIGKDILRFH IYWP L++ + LPK+ +H +IL Sbjct: 242 DY--NPTSKNSQFNRYWPCDMHVIGKDILRFHLIYWPILLMALEISLPKQFLTHPWILFD 299 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GNV+ ++++ VD++RYF++ EI +DG + L +R N+DLAN +G Sbjct: 300 KNKMSKSKGNVLYVDDLLKYFPVDSIRYFVLSEIPYAQDGNITYELLVERHNSDLANVLG 359 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE---IRENMQNQLIHRALAQ 416 NLV R M+ K Y + T + + + + L +R MQ+ + +L + Sbjct: 360 NLVHRVFGMV-KSYRQNNLSKTLITTNLDPKFDLSKQALATLPLVRLKMQDCKVGDSLKE 418 Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTV---LYVTVEVIRQLAILLQAFVPKLANKI 473 +++L ++Y D +PW L K NP++ + LY VE +R L +LLQ F+P+ A+KI Sbjct: 419 IMNLARFANKYIDLVEPWNLFK-NPEKQQLLDHTLYSLVETLRFLGVLLQPFLPQTAHKI 477 Query: 474 FDILFVADENRCFQSLD 490 L +D F+SLD Sbjct: 478 LTQLKASD--ITFESLD 492 >gi|312867085|ref|ZP_07727295.1| methionine--tRNA ligase [Streptococcus parasanguinis F0405] gi|311097214|gb|EFQ55448.1| methionine--tRNA ligase [Streptococcus parasanguinis F0405] Length = 663 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 201/524 (38%), Positives = 314/524 (59%), Gaps = 25/524 (4%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+T I YP+ + HIG AY I DVLAR+ R+ DV + TG DEHGQKI + A+ Sbjct: 3 KSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY G Y Sbjct: 63 AGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEY 122 Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLS 178 SGWYS+ DE ++ + EV++ +G+ + V+W+ EE YF RLS YQD+L+ Sbjct: 123 SGWYSVSDEEFFTESQLAEVFRDENGKVIGGVAPSGHEVEWVSEESYFLRLSKYQDRLVE 182 Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237 +++S P+FI P R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWIDAL N Sbjct: 183 FFKSQPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALLN 242 Query: 238 YLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 Y+T GY + KFW + H++GKDILRFH+IYWP L+ ++ LP+++ +HG+ Sbjct: 243 YVTALGYGQEDHENFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPERLIAHGWF 302 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 + K K+SKS GNVI P ++E G+D LRY+L+R + G DG + + R+N +LAN Sbjct: 303 VMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINYELAN 362 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHR 412 +GNL++R+V+MI K + G +P A+ E+ D + V + E + M R Sbjct: 363 DLGNLLNRTVAMINKYFVGQVP---AYVENVTAFDADLAKVVEENIAEYHKQMNAVDYPR 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL V +++S ++Y D PW L K + D+ + V+ +R +A L+Q F+ + Sbjct: 420 ALEAVWNIISRTNKYIDETAPWVLAKEDGDKEQLAAVMAHLAASLRVVAHLIQPFMMNTS 479 Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510 N I + L + + L+ GF + T PIFPR Sbjct: 480 NAIMEQLGLGLDF----DLENLTLAGFPENVTVVAKGTPIFPRL 519 >gi|306834069|ref|ZP_07467189.1| methionine--tRNA ligase [Streptococcus bovis ATCC 700338] gi|304423642|gb|EFM26788.1| methionine--tRNA ligase [Streptococcus bovis ATCC 700338] Length = 667 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 197/525 (37%), Positives = 309/525 (58%), Gaps = 18/525 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ YI+T I YP+ + HIG AY I DVLAR+ R+ +V + TG DEHGQKI + Sbjct: 1 MTSKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNHEVFYLTGLDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ AG+T + +VD + + + + ++LDISYD FIRTT+ H +++K+ + DIY Sbjct: 61 KAEEAGITPQAYVDGMAADVKKLWEMLDISYDKFIRTTDDYHEKVVADVFEKLLAQDDIY 120 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174 G YSGWYS+ DE ++ + +EV++ +G+ + V+W+ EE YF RL Y D Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYAD 180 Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 +L+ ++ ++P+FI P R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID Sbjct: 181 RLVEFFHAYPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291 AL NY T GY + KFW H++GKDILRFH+IYWP L+ ++ LP ++ Sbjct: 241 ALLNYATALGYGQEEHANFDKFWNEGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPDRLI 300 Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 +HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRIN 360 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQN 407 +LAN +GNL++R+V+MI K + G +P A+ E+ D + V L E + M Sbjct: 361 YELANDLGNLLNRTVAMINKYFGGDVP---AYVENVTAFDADLAGVVEEKLAEYHKQMNA 417 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAF 465 RAL V +++S ++Y D PW L K + D + V+ +R +A L+Q F Sbjct: 418 VDYPRALDAVWNIISRTNKYIDETAPWVLAKDDAKRDELAAVMAHLAASLRVVAHLIQPF 477 Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + +N I + L + + G + PIFPR Sbjct: 478 MMTTSNAIMEQLGLGSDFDLENLTLAGFPEGVKVVAEGTPIFPRL 522 >gi|94987625|ref|YP_595558.1| methionyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] gi|94731874|emb|CAJ55237.1| Methionyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] Length = 651 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 207/520 (39%), Positives = 314/520 (60%), Gaps = 28/520 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YIST I Y NA+PH+GHAY I+ADVL RF+ + G F TGTDEHG+KI +AA+ AG Sbjct: 6 YISTPIYYVNARPHLGHAYSTIVADVLQRFYSILGEKTFFLTGTDEHGEKIIQAAEAAGY 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 +T+ FVD SR F+++ L+I+YD FIRTT+ +H + + + I D GDIY G + G+ Sbjct: 66 STQEFVDSISRQFQNLWPQLNITYDAFIRTTDLQHKEAVQKFLQHIYDAGDIYFGEFGGY 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y L E +Y + E+ G + QH +++EE+ YFF++S Y L+ Y + HP Sbjct: 126 YCLGCERFYTEKELEDG-----FCPQHKTKPEFIEEQNYFFKMSKYLSWLIEYLQQHPNL 180 Query: 187 ILPIERRNEVISFVKSG-LKDLSLSR-KT-FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 I P +NEV+S ++SG L+DL +SR KT WGI++P D Y+ YVW DAL +Y++ Sbjct: 181 IRPERYKNEVLSLLESGALEDLCISRPKTRLPWGIELPFDTNYVCYVWFDALISYISA-- 238 Query: 244 YLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 L+ P G K FWP + H+I KDIL+ HA++WP L SA LP+ K + HG+ L++ K Sbjct: 239 -LNWPTGEYYKTFWPGE-HLIAKDILKPHAVFWPTMLKSAGLPMYKHLNVHGYWLNRDTK 296 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKSL N IDPI +I++ G+DA RYFL+RE+ G D + ++ LK R+N+DLAN +GNL Sbjct: 297 MSKSLNNAIDPITLIQQYGLDAFRYFLIREMNFGSDANFSEESLKHRINSDLANDLGNLF 356 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 +R +SM K + ++P +TE D + + + M+N + +A+ + L+ Sbjct: 357 NRVLSMSTKYFKSLLPEAKEYTEPDMQLRQLTENAQYNYIQLMKNMRLSQAVEALWELIR 416 Query: 423 EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 +++Y D Q PW+L K+ DR TV+ +T+E +R++AI L +P++ + L ++ Sbjct: 417 ALNKYIDTQAPWKLFKEGQTDRLKTVIRLTLECMRKVAISLWPIMPEITITMLKQLGIST 476 Query: 482 E---------NRCFQS---LDQRLKPGFMLHKTFDPIFPR 509 C + ++L G ML T + +FPR Sbjct: 477 SKSKKYGNIPTTCINNDIHAWEQLTTGTMLAPTSN-LFPR 515 >gi|113475475|ref|YP_721536.1| methionyl-tRNA synthetase [Trichodesmium erythraeum IMS101] gi|110166523|gb|ABG51063.1| methionyl-tRNA synthetase [Trichodesmium erythraeum IMS101] Length = 530 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 205/525 (39%), Positives = 298/525 (56%), Gaps = 23/525 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ I+T + Y N PHIG AY I AD LARF RL G VL TGTDEHGQKI + A Sbjct: 7 DKNTFAITTPLYYVNDLPHIGSAYTTIAADTLARFQRLQGRSVLMITGTDEHGQKIQRTA 66 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 +N G K D R F + + L+I YD FIRTT H + ++++ +K DIY Sbjct: 67 ENKGRNPKEHCDSVVRGFESLWEQLNIQYDRFIRTTAPNHEKIVKEFFQRVWEKEDIYLS 126 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 GWY + E + + E+ + + Q V+W +E+ YFFRLS YQ++L ++Y+ Sbjct: 127 QQKGWYCVSCEEFKEERELTEDKHCVIHTNQK--VEWRDEQNYFFRLSRYQERLQAFYQD 184 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 EFI P RRNEV+SFV GL+D S+SR DW K+P D + +YVW DAL Y+T Sbjct: 185 RQEFIQPQSRRNEVLSFVNQGLQDFSISRVNVDWAFKLPVDSSHTIYVWFDALLGYVTA- 243 Query: 243 GYLDNPDGSK------AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 L +PD +K+WP +LH+IGKDILRFHA+YWPA L+SA+LPLP++VF HGF+ Sbjct: 244 --LLDPDSEPTLENALSKWWPINLHLIGKDILRFHAVYWPAMLMSADLPLPERVFGHGFL 301 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 G+K+ KSL N +DP E+I++ G DA+RY+ ++EI G DG ++++ +NADLAN Sbjct: 302 TKDGKKMGKSLNNTLDPFELIQKYGSDAVRYYFLKEIEFGVDGDFNENRFINVLNADLAN 361 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHRALA 415 +GNL++R++ M K ++G IP E + + + +++ + + + Sbjct: 362 DLGNLLNRTLKMAHKYFNGQIPKINVQEVEVTHPLKKIGMGLGEKVTQAYTSLDFSQVCE 421 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIF 474 V+ LV ++Y D PW L K A T VLY +E +R +A LL +P ++N I+ Sbjct: 422 AVLILVRTGNKYIDETAPWSLYKQGQLEALTEVLYSVLESVRLVAYLLSPIIPNISNAIY 481 Query: 475 DILFVA---DENRCFQSLDQRLK-------PGFMLHKTFDPIFPR 509 L + ++ S + +K PG L PIF R Sbjct: 482 QQLGFSNNFNDKSAINSSETFVKQVSWGALPGNQLLGQPQPIFQR 526 >gi|319947459|ref|ZP_08021691.1| methionine--tRNA ligase [Streptococcus australis ATCC 700641] gi|319746399|gb|EFV98660.1| methionine--tRNA ligase [Streptococcus australis ATCC 700641] Length = 663 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 200/524 (38%), Positives = 313/524 (59%), Gaps = 25/524 (4%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+T I YP+ + HIG AY I DVLAR+ R+ DV + TG DEHGQKI + A+ Sbjct: 3 KSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG+T + +VD + +++ +LDISYD FIRTT+ H +++++ + DIY G Y Sbjct: 63 AGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEY 122 Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLS 178 SGWYS+ DE ++ + EV++ +G+ + V+W+ EE YF RLS YQD+L+ Sbjct: 123 SGWYSVSDEEFFTESQLAEVFRDENGKVIGGVAPSGHEVEWVSEESYFLRLSKYQDRLVE 182 Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237 +++S P+FI P R NE++ +F++ GL+DL++SR TF WG+++P +P++++YVW DAL N Sbjct: 183 FFKSQPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVQVPSNPRHVVYVWFDALLN 242 Query: 238 YLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 Y+T GY + KFW + H++GKDILRFH+IYWP L+ ++ LP+++ HG+ Sbjct: 243 YVTALGYGQEDHENFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIGHGWF 302 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 + K K+SKS GNVI P ++E G+D LRY+L+R + G DG + + R+N +LAN Sbjct: 303 VMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINYELAN 362 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHR 412 +GNL++R+V+MI K + G +P A+ E+ D + V + E + M R Sbjct: 363 DLGNLLNRTVAMINKYFGGQVP---AYVENVTAFDADLAKVVEENIAEYHKQMNAVDYPR 419 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 AL V +++S ++Y D PW L K + D+ + V+ +R +A L+Q F+ + Sbjct: 420 ALEAVWNIISRTNKYIDETAPWVLAKEDGDKEQLAAVMAHLAASLRVMAHLIQPFMMNTS 479 Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510 N I + L + + L+ GF + T PIFPR Sbjct: 480 NAIMEQLGLGLDF----DLENLNLAGFPENVTVVAKGTPIFPRL 519 >gi|56807711|ref|ZP_00365584.1| COG0143: Methionyl-tRNA synthetase [Streptococcus pyogenes M49 591] Length = 666 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 195/518 (37%), Positives = 310/518 (59%), Gaps = 11/518 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ I+T I YP+ + HIG AY I DVLAR+ RL G +V + TG DEHGQKI A+ Sbjct: 3 KKPFTITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG++ + +VD +++ + + +LDISYD FIRTT+ H + +++K+ + DIY G Sbjct: 63 EAGISPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122 Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177 YSGWYS+ DE ++ + EV++ DGQ + V+W+ EE YF RLS Y D+L+ Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 ++++ +FI P R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL Sbjct: 183 AFFKERSDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242 Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY + KFW + H++GKDILRFH+IYWP L+ +LP+P ++ +HG+ Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LA Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K +DG +P T D + + L + ++M+ RAL Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 V ++++ ++Y D PW L K + D+A ++V+ +R +A ++Q F+ + + Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482 Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 I L +A + + PIFPR Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520 >gi|153952241|ref|YP_001398097.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97] gi|152939687|gb|ABS44428.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97] Length = 628 Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust. Identities = 199/470 (42%), Positives = 294/470 (62%), Gaps = 11/470 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PH+GHAY IIAD LARF+RL G + F TGTDEHGQKI +AA+ Sbjct: 3 YITTPIYYVNDMPHLGHAYTTIIADTLARFYRLQGHETKFLTGTDEHGQKIEEAAKLRNS 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + + ++ S F+ + D L+ISYD + RTT H + + ++ K+ KGDIYK Y G Sbjct: 63 TPQEYANKISFEFKKLWDELEISYDIYARTTNTMHIEFVKAMFLKMWQKGDIYKDEYEGH 122 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E+++ ++ + N ++EE YFFRLS YQDK+L +YE + I Sbjct: 123 YCISCESFFTQSQLINNCSCP--DCGKNTT-ILKEESYFFRLSKYQDKILQWYE-EKDPI 178 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244 LP ++NE+I+FV+SGLKDLS++R +FDWGIK+P +DP++I+YVW+DAL Y+++ + Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEMNDPKHIIYVWLDALFIYISSLDF 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 G KAKFWPA +H+ GKDILRFHAIYWPAFL+S +LPLPK + +HG+ +GEK+S Sbjct: 239 --QSKGEKAKFWPAHVHLAGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+ P EV++ G +A RYFL+RE+ G DG + ++ L R+NA+L+N GNL++R Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + M K + G I G D L+ L E ++N +R L ++ +S Sbjct: 357 IIGMSTKYFQGNISKEGVLKFYDAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415 Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + +PW L K N ++A ++ + ++ + ++LL +PK K+ Sbjct: 416 NIAISKYEPWNLIKENKHEQAHALVALCANILAKTSLLLSPTLPKSCQKV 465 >gi|46199235|ref|YP_004902.1| methionyl-tRNA synthetase [Thermus thermophilus HB27] gi|46196860|gb|AAS81275.1| methionyl-tRNA synthetase [Thermus thermophilus HB27] Length = 618 Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust. Identities = 198/486 (40%), Positives = 295/486 (60%), Gaps = 16/486 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y NA+PH+GHAY ++AD LAR+HRLDG F TGTDEHG+ + +AAQ AG Sbjct: 5 FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 K FVD+ S F+ D+L I+YDDFIRTTE+RH +++ KK+ + GDIY G Y G Sbjct: 65 EDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y + E +Y + E+ +G PV+ +E YFFR+ Y+ L Y + +P+ Sbjct: 125 LYCVSCERFYTEKELVEG----LCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDL 180 Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P RNEV++ + + DLS+SR WGI +P D ++ YVW DAL NY++ Sbjct: 181 IRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTYVWFDALLNYVSA--- 237 Query: 245 LDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302 LD P+G + FWP H+IGKDIL+ HA++WP L +A +P+ + + GF+L G K Sbjct: 238 LDYPEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRK 297 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SK+LGNV+DP ++E+ G DALRY+L+REI G+D ++ L+ R ADLA+ +GNLV Sbjct: 298 MSKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLV 357 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R+ +M+ + +G IP P A E L+ + + + +R ++ H AL + ++ V Sbjct: 358 QRTRAMLFRFAEGRIPEPVAGEE-----LAEGTGLAKRLRPLVRELKFHVALEEAMAYVK 412 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++RY + +KPWEL K P+ A VLY VE +R +ILL +P ++ L + +E Sbjct: 413 ALNRYINEKKPWELFKKEPEEARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEE 472 Query: 483 NRCFQS 488 R ++ Sbjct: 473 VRLEEA 478 >gi|166367026|ref|YP_001659299.1| methionyl-tRNA synthetase [Microcystis aeruginosa NIES-843] gi|166089399|dbj|BAG04107.1| methionyl-tRNA synthetase [Microcystis aeruginosa NIES-843] Length = 537 Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust. Identities = 205/503 (40%), Positives = 291/503 (57%), Gaps = 13/503 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 + ER+ ++T + Y N PHIG AY I+ADV+AR+ RL G VL TGTDEHGQKI + Sbjct: 4 LNERKTFALTTPLYYVNDIPHIGSAYTTIVADVMARWQRLQGNSVLLITGTDEHGQKIER 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A G+ + D+ + +F ++ L I YD F RTT RH ++++ +KGDIY Sbjct: 64 TAAAKGLNPQEHCDRIATSFANLWAKLHIQYDRFSRTTAPRHQAIVNEFFERVWEKGDIY 123 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 GWY + E + E+ + + +W +EE YFFRLS YQ +L +Y Sbjct: 124 LDRQQGWYCVACEEFKEKRELLDNGCCPIHT--NLAAEWRDEENYFFRLSKYQTQLEQFY 181 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 + P+FI P RRNEV++FV GL+D S+SR WG IP D Q+ +YVW DAL Y+T Sbjct: 182 QEQPDFIQPESRRNEVLNFVNQGLQDFSISRVNVAWGFPIPHDGQHTIYVWFDALLGYVT 241 Query: 241 TTGYLDNPD-----GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 LD D + AK+WP DLH+IGKDILRFHAIYWPA L+SA LPLPK+VF HGF Sbjct: 242 --ALLDPEDEPTLENALAKWWPIDLHLIGKDILRFHAIYWPAMLMSAGLPLPKRVFGHGF 299 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + G K+ KSLGN +DP ++++ G DA+RY+ V+EI G+DG + + +NADLA Sbjct: 300 LTKDGRKMGKSLGNTLDPFDLVDRYGADAVRYYFVKEIELGQDGDFQETRFVNILNADLA 359 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414 N +GNL++R++ M+ K + P +++ L L I E + L ++A Sbjct: 360 NDLGNLLNRTLGMVKKYCQNIPPQLTGVDIPNDNRLKNMGINLGGIVEQKYDALQFNQAC 419 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++++L+ +++ D PW L K A VLY +E +R A LL +P L++KI Sbjct: 420 EEILALIRASNKFIDESAPWSLFKQKQQAAVEQVLYAVLESVRLSAYLLSPIIPTLSSKI 479 Query: 474 FDIL-FVADENRCFQSLDQRLKP 495 + L FV D N F+S D P Sbjct: 480 YQQLGFVIDFN-TFRSEDGEDPP 501 >gi|68543|pir||SYTWMT methionine-tRNA ligase (EC 6.1.1.10) - Thermus aquaticus gi|155136|gb|AAA27510.1| transfer RNA-Met synthetase [Thermus thermophilus] Length = 616 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 200/486 (41%), Positives = 293/486 (60%), Gaps = 16/486 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y NA+PH+GHAY ++AD LAR+HRLDG F TGTDEHG+ + +AAQ AG Sbjct: 5 FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 K FVD+ S F+ D+L I+YDDFIRTTE+RH +++ KK+ + GDIY G Y G Sbjct: 65 EDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y + E +Y + E+ +G PV+ +E YFFR+ Y+ L Y + +P+ Sbjct: 125 LYCVSCERFYTEKELVEG----LCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDL 180 Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P RNEV++ + + DLS+SR WGI +P D ++ YVW DAL NY++ Sbjct: 181 IRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTYVWFDALLNYVSA--- 237 Query: 245 LDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302 LD P+G + FWP H+IGKDIL+ HA++WP L +A +P+ + + GF+L G K Sbjct: 238 LDYPEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRK 297 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SK+LGNV+DP ++E+ G DALRY+L+REI G+D ++ L+ R ADLA+ +GNLV Sbjct: 298 MSKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLV 357 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R+ +M+ + +G IP P A E E + R+ +RE H AL + ++ V Sbjct: 358 QRTRAMLFRFAEGRIPEPVAGEELAEGT-GLAGRLRPLVRELK----FHVALEEAMAYVK 412 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++RY + +KPWEL K P+ A VLY VE +R +ILL +P ++ L + +E Sbjct: 413 ALNRYINEKKPWELFKKEPEEARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEE 472 Query: 483 NRCFQS 488 R ++ Sbjct: 473 VRLEEA 478 >gi|255076485|ref|XP_002501917.1| methionyl-tRNA synthetase [Micromonas sp. RCC299] gi|226517181|gb|ACO63175.1| methionyl-tRNA synthetase [Micromonas sp. RCC299] Length = 931 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 194/477 (40%), Positives = 279/477 (58%), Gaps = 15/477 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 EK I+TAI Y N PH+GHAYE I AD +AR+HR G DVLF TG+DEHGQKIA+AA+ Sbjct: 228 EKFCITTAINYANGAPHMGHAYEAISADCIARYHRRYGRDVLFQTGSDEHGQKIAEAAET 287 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG D+ F+ + +S D + RTT + H CR L++ GDIY Y Sbjct: 288 AGCAPIELCDKYVNAFQTLNAKTKVSNDVYNRTTSESHKAACRKLFEMSKANGDIYLDTY 347 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY++R+E + + + A Y + P++ M+EE YFFR S YQ +L+ + E + Sbjct: 348 EGWYNVREETFVTETDA---AAANYLDPVSGKPLKKMKEESYFFRQSRYQSRLIEHIEKN 404 Query: 184 PEFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P FI P RRNE+++ ++ L+DLS+SR TFDWGI +PD P ++MYVW DALTNYLT T Sbjct: 405 PAFIQPTRRRNEILARLREDELRDLSVSRTTFDWGIPVPDAPGHVMYVWFDALTNYLTGT 464 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GE 301 G+ P+G WPA +H+IGKDI+ FH + WP L SA LPLPK VF HGF+ G+ Sbjct: 465 GWPQKPNGD--GMWPASVHIIGKDIIWFHCVIWPCMLWSAGLPLPKTVFGHGFVTAADGQ 522 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS+GNV+DP++ + D RY+L+R G D + + L N+DLA+ +GNL Sbjct: 523 KMSKSIGNVVDPMDQLTRYSSDTFRYYLMRNAVYGSDVPFSESNLVYVHNSDLADVMGNL 582 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 V R+ ++ K+ G++P D ++L V S + M N + R I+ + Sbjct: 583 VHRATNLCNKNCGGVVPDCVPEKVFDVNLLRVQS------EQAMSNLEVQRCCELAINAM 636 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + ++Y PW +K +R + ++ T+E + A L F+P + IF+ L Sbjct: 637 KDTNKYLTDSAPWAVKGDGAAERKAVIIRSTLEAVYAAAHFLAPFIPDACDAIFEKL 693 >gi|328883600|emb|CCA56839.1| Methionyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712] Length = 535 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 194/481 (40%), Positives = 296/481 (61%), Gaps = 14/481 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y N PH+GHAY + DVL R+HR G V + TGTDEHGQKI + A+ Sbjct: 14 FYVTTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEAND 73 Query: 67 VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 VT + + D+ ++ + + L+I+ DDFIRTT+KRH D + + + DK +IYKG Y Sbjct: 74 VTPQAWCDKLVEEAWKPLWEHLNIANDDFIRTTQKRHTDRVQEFVQDLYDKDEIYKGGYE 133 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + E Y ++ + DG A H PV+ ++EE YFF+LSAY KLL +YE++P Sbjct: 134 GPYCVGCEEYKLPGDLIEAEDGTKLCAVHKKPVEILKEENYFFKLSAYGPKLLEFYEANP 193 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 FI P RNEV++FVK GL+DLS+SR TFDWG+ +P D ++++YVWIDAL NY T GY Sbjct: 194 GFIQPESARNEVVNFVKQGLEDLSISRSTFDWGVPVPWDEKHVIYVWIDALLNYATAVGY 253 Query: 245 LDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 +NP AKF +PA++H+IGKDILRFHA+ WPA L++ LP+P +V ++G+++ GE Sbjct: 254 NENP----AKFDETFPANVHLIGKDILRFHAVIWPAMLMAQGLPVPGRVAANGWLMVGGE 309 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS I P ++ GVDA R++ +R IA G+DG + + R ++LAN GNL Sbjct: 310 KMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAIAFGQDGSFSWEDFTARYTSELANDYGNL 369 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420 SR +M+ K + G +P A +++++I ++ + + +L + + Sbjct: 370 ASRVAAMVGKYFGGALPASTADGDAEKAIHEGLAKAVSVADVKIGEELDFQGGILAIFDF 429 Query: 421 VSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 V +V+ Y Q+PW++ K + R +T+LY E +R +A+LL +P+ + +++ Sbjct: 430 VKQVNGYITEQEPWKVAKDESEEGRARLATILYTAAESLRAVAVLLNPIMPETSQALWES 489 Query: 477 L 477 L Sbjct: 490 L 490 >gi|303232822|ref|ZP_07319506.1| methionine--tRNA ligase [Atopobium vaginae PB189-T1-4] gi|302481012|gb|EFL44088.1| methionine--tRNA ligase [Atopobium vaginae PB189-T1-4] Length = 562 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 198/490 (40%), Positives = 287/490 (58%), Gaps = 23/490 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y NA PH+G AY ++ DV AR+ R G +V F TG DEHG+K+A+AAQ G Sbjct: 22 YITTPIYYVNAAPHLGTAYCTLLCDVQARYRRSMGYNVRFLTGMDEHGEKVAQAAQEHGY 81 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + + D + F+D+ L+ISYDDFIRTTE R + + LW ++ + G +YKG Y GW Sbjct: 82 SPQEWCDAQAPLFKDLWKTLNISYDDFIRTTEPRQYKAVQTLWNRMRESGYLYKGTYDGW 141 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQH------NPVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y L E Y+ ++ A +H P++ +EEE YFF+LSA+QD+LL Y Sbjct: 142 YCLPCETYFTPTQLSHAAQEHQRADEHLCPDCQRPLKRVEEESYFFKLSAFQDRLLELYA 201 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 HP+F+ P R NEV SFV+ GL+DLS+SR +FDWGI +P D +++ YVW DAL NY+T+ Sbjct: 202 KHPDFVQPTFRMNEVRSFVEGGLQDLSVSRTSFDWGIPVPFDTKHVTYVWFDALLNYMTS 261 Query: 242 TGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 Y ++ K +F WPA HV+GKDI+RFH I WPA L++ N LP+ VF+HGF+ Sbjct: 262 VFYGEDDPIRKNQFAFRWPAQCHVVGKDIIRFHCIIWPAMLMAINEALPEHVFAHGFLTV 321 Query: 299 K------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 + EK+SKS GN I P EVI+ +G+D RY+ + ++ G+D D +K+ NA Sbjct: 322 RNSETGNAEKMSKSRGNAIAPQEVIDLLGIDGYRYYFMCDVIHGEDSAISFDRMKQVYNA 381 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVLQEIRENMQNQLI 410 DLAN GNLVSR++SM K +DG P + ++L V + + M+ Sbjct: 382 DLANSWGNLVSRTLSMCAKYFDGQTPAIFDGWHDEHNVLRDIVDDGLFADYSAAMEQMRY 441 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKT------NPDRASTVLYVTVEVIRQLAILLQA 464 A V+ L+ + Y + PW L KT + + + V+ +E IR A LL Sbjct: 442 ADAKEAVMKLIHAANHYIEDMAPWTLAKTAATNDKDAQQLARVMLNLLESIRIAAHLLAP 501 Query: 465 FVPKLANKIF 474 +P ++++ Sbjct: 502 IMPHTSHEVL 511 >gi|239980679|ref|ZP_04703203.1| methionyl-tRNA synthetase [Streptomyces albus J1074] gi|291452539|ref|ZP_06591929.1| methionyl-tRNA synthetase [Streptomyces albus J1074] gi|291355488|gb|EFE82390.1| methionyl-tRNA synthetase [Streptomyces albus J1074] Length = 538 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 192/481 (39%), Positives = 292/481 (60%), Gaps = 11/481 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y N PH+GHAY + DVL R+HR G V + TGTDEHGQKI + A G Sbjct: 14 FYVTTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTADANG 73 Query: 67 VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 V+ + + D+ + ++ + + L+I+ DDFIRTTEKRH D + + + DKG+IYKG Y Sbjct: 74 VSPQEWCDKLVTEAWKPLWEHLEIANDDFIRTTEKRHTDRVQEFVQDLWDKGEIYKGGYE 133 Query: 126 GWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 G Y + E Y E+ G A + PV+ ++EE YFF+LS Y +LL +YE Sbjct: 134 GPYCVGCEEYKLPGELLDGEGDFAGEKLCPVHKKPVEILKEENYFFKLSEYAQRLLDFYE 193 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 ++P FI P RNEV++FV+ GL DLS+SR TFDWG+K+P D ++++YVW+DAL NY T Sbjct: 194 ANPGFIQPESARNEVLNFVRQGLTDLSISRSTFDWGVKVPWDDKHVIYVWVDALLNYATA 253 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY + A F PAD+H++GKDILRFHA+ WPA L++ LPLP +V ++G++L GE Sbjct: 254 AGYGADQARFDATF-PADVHLVGKDILRFHAVIWPAMLMAQGLPLPGRVVANGWLLVGGE 312 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS I P ++ GVDA R++ +R I+ G+DG + + R ++LAN GNL Sbjct: 313 KMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAISFGQDGSFSWEDFSARYTSELANDYGNL 372 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420 SR +M+ K + G +P A E+++++ ++ + + +L + + Sbjct: 373 ASRVAAMVNKYFGGELPAATASGEAEKAVQEGLAKAVATADRAIGEELDFQSGILAIFDF 432 Query: 421 VSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 V +V+ Y Q+PW++ K + + R +T+LY E +R +A+LL +P + K++D Sbjct: 433 VKQVNGYITEQEPWKVAKDDSEEGRARLATILYTAAESLRAMAVLLNPVMPDTSQKLWDS 492 Query: 477 L 477 L Sbjct: 493 L 493 >gi|55981267|ref|YP_144564.1| methionyl-tRNA synthetase [Thermus thermophilus HB8] gi|62296622|sp|P23395|SYM_THET8 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|55772680|dbj|BAD71121.1| methionyl-tRNA synthetase [Thermus thermophilus HB8] Length = 618 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 200/486 (41%), Positives = 293/486 (60%), Gaps = 16/486 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y NA+PH+GHAY ++AD LAR+HRLDG F TGTDEHG+ + +AAQ AG Sbjct: 5 FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 K FVD+ S F+ D+L I+YDDFIRTTE+RH +++ KK+ + GDIY G Y G Sbjct: 65 EDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y + E +Y + E+ +G PV+ +E YFFR+ Y+ L Y + +P+ Sbjct: 125 LYCVSCERFYTEKELVEG----LCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDL 180 Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P RNEV++ + + DLS+SR WGI +P D ++ YVW DAL NY++ Sbjct: 181 IRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTYVWFDALLNYVSA--- 237 Query: 245 LDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302 LD P+G + FWP H+IGKDIL+ HA++WP L +A +P+ + + GF+L G K Sbjct: 238 LDYPEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRK 297 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SK+LGNV+DP ++E+ G DALRY+L+REI G+D ++ L+ R ADLA+ +GNLV Sbjct: 298 MSKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLV 357 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R+ +M+ + +G IP P A E E + R+ +RE H AL + ++ V Sbjct: 358 QRTRAMLFRFAEGRIPEPVAGEELAEGT-GLAGRLRPLVRELK----FHVALEEAMAYVK 412 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++RY + +KPWEL K P+ A VLY VE +R +ILL +P ++ L + +E Sbjct: 413 ALNRYINEKKPWELFKKEPEEARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEE 472 Query: 483 NRCFQS 488 R ++ Sbjct: 473 VRLEEA 478 >gi|157829738|pdb|1A8H|A Chain A, Methionyl-Trna Synthetase From Thermus Thermophilus Length = 500 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 200/486 (41%), Positives = 293/486 (60%), Gaps = 16/486 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y NA+PH+GHAY ++AD LAR+HRLDG F TGTDEHG+ + +AAQ AG Sbjct: 5 FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 K FVD+ S F+ D+L I+YDDFIRTTE+RH +++ KK+ + GDIY G Y G Sbjct: 65 EDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y + E +Y + E+ +G PV+ +E YFFR+ Y+ L Y + +P+ Sbjct: 125 LYCVSCERFYTEKELVEG----LCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDL 180 Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P RNEV++ + + DLS+SR WGI +P D ++ YVW DAL NY++ Sbjct: 181 IRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTYVWFDALLNYVSA--- 237 Query: 245 LDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302 LD P+G + FWP H+IGKDIL+ HA++WP L +A +P+ + + GF+L G K Sbjct: 238 LDYPEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRK 297 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SK+LGNV+DP ++E+ G DALRY+L+REI G+D ++ L+ R ADLA+ +GNLV Sbjct: 298 MSKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLV 357 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R+ +M+ + +G IP P A E E + R+ +RE H AL + ++ V Sbjct: 358 QRTRAMLFRFAEGRIPEPVAGEELAEGT-GLAGRLRPLVRELK----FHVALEEAMAYVK 412 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++RY + +KPWEL K P+ A VLY VE +R +ILL +P ++ L + +E Sbjct: 413 ALNRYINEKKPWELFKKEPEEARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEE 472 Query: 483 NRCFQS 488 R ++ Sbjct: 473 VRLEEA 478 >gi|159029236|emb|CAO87596.1| metG [Microcystis aeruginosa PCC 7806] Length = 537 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 205/498 (41%), Positives = 288/498 (57%), Gaps = 13/498 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 + ER+ ++T + Y N PHIG AY I+ADV+AR+ RL G VL TGTDEHGQKI + Sbjct: 4 LNERKTFALTTPLYYVNDIPHIGSAYTTIVADVMARWKRLQGNSVLLITGTDEHGQKIER 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A G+ + D+ + +F ++ L I YD F RTT RH ++K+ +KGDIY Sbjct: 64 TAAAKGLNPQEHCDRIATSFANLWAKLHIQYDRFSRTTAPRHQAIVNEFFEKVWEKGDIY 123 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 GWY + E + E+ + + +W +EE YFFRLS YQ +L Y Sbjct: 124 LDRQQGWYCVACEEFKEKRELLDNGCCPIHT--NLAAEWRDEENYFFRLSKYQAQLEQLY 181 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 + P FI P RRNEV++FV GL+D S+SR WG IP D Q+ +YVW DAL Y+T Sbjct: 182 QEQPNFIQPESRRNEVLNFVNQGLQDFSISRVNVAWGFPIPHDGQHTIYVWFDALLGYVT 241 Query: 241 TTGYLDNPD-----GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 LD D + AK+WP DLH+IGKDILRFHAIYWPA L+SA LPLPK+VF HGF Sbjct: 242 --ALLDPEDEPTLENALAKWWPIDLHLIGKDILRFHAIYWPAMLMSAGLPLPKRVFGHGF 299 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + G K+ KSLGN +DP ++++ G DA+RY+ V+EI G+DG + + +NADLA Sbjct: 300 LTKDGRKMGKSLGNTLDPFDLVDRYGADAVRYYFVKEIELGQDGDFQETRFVNILNADLA 359 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414 N +GNL++R++ M+ K + P +++ L L I E + L ++A Sbjct: 360 NDLGNLLNRTLGMVKKYCQNIPPQLTGVDIPNDNRLKNMGTNLGVIVEQKYDALQFNQAC 419 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++++L+ +++ D PW L K A VLY +E +R A LL +P L++KI Sbjct: 420 EEILALIRASNKFIDESAPWSLFKQKQQAAVEQVLYAVLESVRLSAYLLSPIIPTLSSKI 479 Query: 474 FDIL-FVADENRCFQSLD 490 + L FV D N F+S D Sbjct: 480 YQQLGFVIDFN-TFRSED 496 >gi|46580460|ref|YP_011268.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|46449879|gb|AAS96528.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|311234204|gb|ADP87058.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris RCH1] Length = 663 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 197/478 (41%), Positives = 289/478 (60%), Gaps = 12/478 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ Y++T I Y NA+PH+GHAY I+AD + RF RL G D F TGTDEHG KI +AA+ Sbjct: 2 DRFYVTTPIYYVNAKPHLGHAYTTIVADSMRRFQRLLGKDTYFLTGTDEHGDKIVQAAEK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AGV+ K FVD S FRD+ L + YD FIRTT+ H + +++ D GDIY G Y Sbjct: 62 AGVSPKDFVDGVSGQFRDLWPHLGVEYDQFIRTTDPEHKKVVQAFLQRVYDSGDIYFGEY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y E +Y + E+ G Q+ Q P +++ E+ YFFR+S YQ L + +P Sbjct: 122 GGHYCYGCERFYTEKELENGLCPQH---QVKP-EYIAEKNYFFRMSKYQGWLKQHILDNP 177 Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +FI P RNEV+S + SG L+DL +SR WGI++P D Y+ YVW DAL NY++ Sbjct: 178 DFIRPERYRNEVLSMLDSGALEDLCISRPKSRLTWGIELPFDTDYVCYVWFDALLNYVSA 237 Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 G+ PDG + A +WP H++ KDIL+ HA++WP L +A L + HG+ L + Sbjct: 238 LGW---PDGDRFANYWPGVQHLVAKDILKPHAVFWPTMLKAAGLEPYNNLNVHGYWLVRD 294 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKSLGNV+ P+E+I+ G++A RYFL+RE+ G D + ++ L R+NADLAN +GN Sbjct: 295 TKMSKSLGNVVSPLEMIDRYGLNAFRYFLLREMHFGSDASFSEEALVGRLNADLANDLGN 354 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SR +SM K + G++P PGA+TE DE++ ++ + + AL + L Sbjct: 355 LYSRVLSMTAKYFGGVVPAPGAYTEEDETLRALAAEAQRNFCNLFGRVRFSNALESLWEL 414 Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V +++Y D+ PW L K+ + R TV+Y +E +R++A+ L +P+ A + L Sbjct: 415 VRALNKYVDSAAPWTLFKQGDTKRLGTVMYTLLESMRKVAVHLLPVMPEAATSMLAQL 472 >gi|13357755|ref|NP_078029.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170761906|ref|YP_001752278.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|183508737|ref|ZP_02958215.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701992|ref|ZP_02971615.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|25009406|sp|Q9PQU6|SYM_UREPA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|11356980|pir||C82922 methionyl-tRNA synthetase UU197 [imported] - Ureaplasma urealyticum gi|6899162|gb|AAF30604.1|AE002119_9 methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827483|gb|ACA32745.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|182675666|gb|EDT87571.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700768|gb|EDU19050.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 521 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 200/519 (38%), Positives = 310/519 (59%), Gaps = 10/519 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++K +IST I Y + PHIGHAY IIADVLAR+ RL G DV F TG DEHGQKI + Sbjct: 1 MLKQKKFFISTPIYYSSGNPHIGHAYTTIIADVLARYKRLFGYDVFFLTGMDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A ++ K VD+NS F ++ L+IS+ FIRTT+ H ++ + ++ + +G IY Sbjct: 61 KAFEENISPKALVDRNSIIFLNLWKRLNISFSKFIRTTQMDHEESVQKVFSYLYKQGKIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 G ++G+Y + E YN E+ K D + ++ EE YF+++S L +YY Sbjct: 121 LGQWTGYYCVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 ++HP FI+P ER NE+++ + L+DLS+SR TFDWGI I ++P++++YVW+DAL NYLT Sbjct: 181 QNHPNFIIPNERANEMVNNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLT 240 Query: 241 TTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 TGYL N + K+W + +H++ K+I RFH IYWP FL + P + SHG+I Sbjct: 241 ATGYLSNNEELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLNDLQIRFPSTILSHGWI 300 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 + K K+SKSLGNVIDP +I+ GVDALRY+L+ +++ +D + +D L + N LAN Sbjct: 301 ITKEGKMSKSLGNVIDPNVLIDTYGVDALRYYLMADLSLFRDAIFSEDNLIETYNTQLAN 360 Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 GN++SR++ M+ K + ++P G ++DE + ++ ++ ++ ++EN+ I +AL Sbjct: 361 SYGNMISRTLGMLKKYRNNIVPKYVGCVLKNDEKLENLINKNIELVQENINKYSIDKALN 420 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV-TVEVIRQLAILLQAFVPKLANKIF 474 + ++ E ++Y + KPWEL K ++ L V V+VI+ LL + + + K Sbjct: 421 CIQEILVEANKYIEDNKPWELAKNQQEQELDSLLVHLVKVIQVTTTLLSPILIEGSKKAV 480 Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFD--PIFPRFL 511 + L + SL F HK D PIF R + Sbjct: 481 EQLNFDESFLTLASLASY--DIFNYHKVNDSKPIFARII 517 >gi|171920487|ref|ZP_02931504.2| methionyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171902953|gb|EDT49242.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813] Length = 521 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 200/519 (38%), Positives = 310/519 (59%), Gaps = 10/519 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++K +IST I Y + PHIGHAY IIADVLAR+ RL G DV F TG DEHGQKI + Sbjct: 1 MLKQKKFFISTPIYYSSGNPHIGHAYTTIIADVLARYKRLFGYDVFFLTGMDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A ++ K VD+NS F ++ L+IS+ FIRTT+ H ++ + ++ + +G IY Sbjct: 61 KAFEENISPKALVDRNSIIFLNLWKRLNISFSKFIRTTQMDHEESVQKVFSYLYKQGKIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 G ++G+Y + E YN E+ K D + ++ EE YF+++S L +YY Sbjct: 121 LGQWTGYYCVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 ++HP FI+P ER NE+++ + L+DLS+SR TFDWGI I ++P++++YVW+DAL NYLT Sbjct: 181 QNHPNFIIPNERANEMVNNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLT 240 Query: 241 TTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 TGYL N + K+W + +H++ K+I RFH IYWP FL + P + SHG+I Sbjct: 241 ATGYLSNNEELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLNDLQIRFPSTILSHGWI 300 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 + K K+SKSLGNVIDP +I+ GVDALRY+L+ +++ +D + +D L + N LAN Sbjct: 301 ITKEGKMSKSLGNVIDPNVLIDTYGVDALRYYLMADLSLFRDAIFSEDNLIETYNTQLAN 360 Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 GN++SR++ M+ K + ++P G ++DE + ++ ++ ++ ++EN+ I +AL Sbjct: 361 SYGNMISRTLGMLKKYRNNIVPKYVGCVLKNDEKLENLINKNIELVQENINKYSIDKALN 420 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV-TVEVIRQLAILLQAFVPKLANKIF 474 + ++ E ++Y + KPWEL K ++ L V V+VI+ LL + + + K Sbjct: 421 CIQEILVEANKYVEDNKPWELAKNQQEQELDSLLVHLVKVIQVTTTLLSPILIEGSKKAV 480 Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFD--PIFPRFL 511 + L + SL F HK D PIF R + Sbjct: 481 EQLNFDESFLTLASLASY--DIFNYHKVNDSKPIFARII 517 >gi|218885863|ref|YP_002435184.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756817|gb|ACL07716.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 657 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 199/478 (41%), Positives = 286/478 (59%), Gaps = 12/478 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ YI+T I Y NA+PH+GHAY I+AD L RFHRL G D F TGTDEHG KI +AA+ Sbjct: 2 DRFYITTPIYYVNAKPHLGHAYTTIVADSLRRFHRLLGKDTYFLTGTDEHGDKIVQAAEK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + + FVD S FRD+ L + YD FIRTT+ H + + +K+ D GDIY G Y Sbjct: 62 AGCSPQEFVDGVSTQFRDLWPHLGVEYDQFIRTTDAEHKKCVQDVLQKVYDSGDIYFGEY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y E +Y + E+ G Q+ Q P +++ E+ YFFR+S YQ L Y +P Sbjct: 122 GGHYCYGCERFYTEKELENGLCPQH---QVKP-EYISEKNYFFRMSKYQGWLRQYILDNP 177 Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +FI P R+EV+ + SG L+DL +SR WGI++P D Y+ YVW DAL NY++ Sbjct: 178 DFIRPERYRSEVLGILDSGALEDLCISRPKSRLTWGIELPFDKDYVCYVWFDALINYISA 237 Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 G+ PD K +FWP H++ KDIL+ HA++WP L +A L + HG+ L + Sbjct: 238 LGW---PDDEKFGRFWPGVQHLVAKDILKPHAVFWPTMLKAAGLEPYNNLNVHGYWLVRD 294 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKSLGNV+DP+ +I++ G+ A RYFL+RE+ G D + +D L R+NADLAN +GN Sbjct: 295 TKMSKSLGNVVDPLSMIDKYGLSAFRYFLLREMHFGSDASFSEDALVARLNADLANDLGN 354 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SR +SM K + G++P G TE DE+I ++ + + AL + L Sbjct: 355 LFSRVLSMTAKYFGGVVPAQGPLTEEDEAIRTLAEEAQRNYVRLFERVRFSNALESLWEL 414 Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V ++RY D PW L K+ + +R TV+YV +E +R++A+ L +P+ + + L Sbjct: 415 VRALNRYVDHAAPWTLFKQGDTERLGTVMYVMLECMRKVAVHLWPVMPEASTVLLGQL 472 >gi|78100832|pdb|1WOY|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225f Mutant From Thermus Thermophilus gi|119389107|pdb|2D5B|A Chain A, Crystal Structure Of Thermus Thermophilus Methionyl Trna Synthetase Y225f Mutant Obtained In The Presence Of Peg6000 Length = 500 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 199/486 (40%), Positives = 293/486 (60%), Gaps = 16/486 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y NA+PH+GHAY ++AD LAR+HRLDG F TGTDEHG+ + +AAQ AG Sbjct: 5 FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 K FVD+ S F+ D+L I+YDDFIRTTE+RH +++ KK+ + GDIY G Y G Sbjct: 65 EDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y + E +Y + E+ +G PV+ +E YFFR+ Y+ L Y + +P+ Sbjct: 125 LYCVSCERFYTEKELVEG----LCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDL 180 Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P RNEV++ + + DLS+SR WGI +P D ++ +VW DAL NY++ Sbjct: 181 IRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTFVWFDALLNYVSA--- 237 Query: 245 LDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302 LD P+G + FWP H+IGKDIL+ HA++WP L +A +P+ + + GF+L G K Sbjct: 238 LDYPEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRK 297 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SK+LGNV+DP ++E+ G DALRY+L+REI G+D ++ L+ R ADLA+ +GNLV Sbjct: 298 MSKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLV 357 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R+ +M+ + +G IP P A E E + R+ +RE H AL + ++ V Sbjct: 358 QRTRAMLFRFAEGRIPEPVAGEELAEGT-GLAGRLRPLVRELK----FHVALEEAMAYVK 412 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++RY + +KPWEL K P+ A VLY VE +R +ILL +P ++ L + +E Sbjct: 413 ALNRYINEKKPWELFKKEPEEARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEE 472 Query: 483 NRCFQS 488 R ++ Sbjct: 473 VRLEEA 478 >gi|302341677|ref|YP_003806206.1| methionyl-tRNA synthetase [Desulfarculus baarsii DSM 2075] gi|301638290|gb|ADK83612.1| methionyl-tRNA synthetase [Desulfarculus baarsii DSM 2075] Length = 656 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 196/484 (40%), Positives = 297/484 (61%), Gaps = 15/484 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I Y NA+PH+GHAY I+ADV RFH L G TGTDEHG KIA+AA G Sbjct: 5 FYITTPIYYVNAEPHLGHAYTTIVADVARRFHLLLGQTARMQTGTDEHGDKIAEAAAKNG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 ++ + + D+ S FRD+ L I YD F+RTT+ +H T R L +K+ D+GDIY Y G Sbjct: 65 LSPRQYADRVSGLFRDLWPHLHIQYDRFVRTTDPQHIQTVRALLQKVHDQGDIYFAKYGG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y + E + D E+ +G ++ PV ++EEE YFFR+ YQ L+ + +++P+F Sbjct: 125 NYCVACERFLTDKELVEGKCPDHHT---EPV-YIEEENYFFRMGKYQQALIEHIQANPDF 180 Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P +NEV+S + L DL +SR WG+++P D ++ YVW DAL NY+T Sbjct: 181 IRPERYKNEVLSMLAEPLDDLCISRPKSRLTWGVELPFDQNFVTYVWFDALINYITG--- 237 Query: 245 LDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 LD P+G A+FWP H+I KDIL+ HAI+WP L++ LPL +++ HG+ K+ Sbjct: 238 LDYPNGDDFARFWPGQ-HLIAKDILKPHAIFWPTMLMAMGLPLYQRLNVHGYWNVDQAKM 296 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNV+ P+E+ + GVDA RYFL+RE+A G D + ++ L +R NADLAN +GNL S Sbjct: 297 SKSLGNVVRPLELAQVYGVDAFRYFLLREMAFGLDAGFSEELLIQRYNADLANDLGNLYS 356 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R ++M++K ++G++P PG T +DE + V ++ +R+ + H+ LA++ L+ Sbjct: 357 RVLNMLVKYHNGVVPQPGPLTPADEELAQVAAQARDGLRQGFEAFAFHKGLARLWELIGA 416 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR---QLAILLQAFVPKLANKIFDILFVA 480 ++Y A +PW L P++A + V E++R Q+A+L+ +P++A + + +A Sbjct: 417 ANKYVVANEPWAL-AAQPEQAPRLARVMHELVRTLAQVAVLIWPVMPEMAETMAGHMGLA 475 Query: 481 DENR 484 R Sbjct: 476 HPAR 479 >gi|283957174|ref|ZP_06374638.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336] gi|283791350|gb|EFC30155.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336] Length = 628 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 196/477 (41%), Positives = 300/477 (62%), Gaps = 25/477 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PH+GHAY IIAD LARF+RL G + F TGTDEHGQKI +AA+ Sbjct: 3 YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + + D+ S F+ + D +I+YD + RTT+ RH + + ++ K+ KGDIYK Y G Sbjct: 63 TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E+++ ++ Q + ++EE YFF+LS YQDK+L +YE + I Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQ---TRILKEESYFFKLSKYQDKILQWYE-EKDPI 178 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244 LP ++NE+I+FV+SGLKDLS++R +FDWGIK+P +D ++I+YVW+DAL Y+++ + Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYISSLDF 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 G AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+ +GEK+S Sbjct: 239 --QSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+ P E+++ G +A RYFL+RE+ G DG + ++ L R+NA+L+N GNL++R Sbjct: 297 KSKGNVVKPKEIVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN-------MQNQLIHRALAQV 417 + M K G I S ES+L + L +++E+ ++N +R L ++ Sbjct: 357 IIGMSTKYSQGNI--------SKESVLKFYNAELNQVKEHLNLAVEFLENLQCNRYLEEL 408 Query: 418 ISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +S + +PW L K N ++A+ ++ + ++ + ++LL +PK K+ Sbjct: 409 FKALSVANLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPALPKSCQKV 465 >gi|284929295|ref|YP_003421817.1| methionyl-tRNA synthetase [cyanobacterium UCYN-A] gi|284809739|gb|ADB95436.1| methionyl-tRNA synthetase [cyanobacterium UCYN-A] Length = 536 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 196/523 (37%), Positives = 303/523 (57%), Gaps = 20/523 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K ++T + Y N PH+G AY +IADV++R+ +L G +VLF TGTDEHGQKI + A+ Sbjct: 9 KKFVLTTPLYYANDLPHVGSAYTTMIADVISRYKKLKGEEVLFITGTDEHGQKIERNAEA 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + + D+ +F+ + D LDI YD F RTT+ +H ++++ D GDIY Sbjct: 69 NNLPAQEHCDRIVSSFKLLWDKLDIQYDRFSRTTDTQHQKIVYEFFQRVWDNGDIYLSRQ 128 Query: 125 SGWYSLRDEAYYNDDEVYK-GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY + E + + E+ + G ++N + +W +EE YFF+LS YQ +L Y+++ Sbjct: 129 QGWYCVACEEFKEERELLENGCCPVHFNKK---AEWYDEENYFFKLSKYQSQLEELYKNN 185 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 PEFI P RNE++ FV GLKD S+SR WG +P+DP + +YVW DAL Y+T Sbjct: 186 PEFIKPKSCRNEILKFVNQGLKDFSISRVNVKWGFTVPNDPNHTIYVWFDALLGYITALL 245 Query: 244 YLDNPDGSK----AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 ++ D + ++ WP +LH+IGKDILRFHA+YWPA L+SA L LP+ +F HGF+ Sbjct: 246 ESESKDSTLDNAISQGWPVNLHLIGKDILRFHAVYWPAMLMSAKLSLPEYIFGHGFLTKD 305 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G+K+ KS GN +DP E++ + G D +RY+ ++EI CGKDG +++ VNADLA+ +G Sbjct: 306 GQKMGKSSGNTLDPFELVNKYGPDPIRYYFLKEIECGKDGDFNETRFINTVNADLADDLG 365 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE-IRENMQNQLIHRALAQVI 418 NL++R++ M K +G++P E L L E + + N + ++ Sbjct: 366 NLLNRTLGMTQKYCEGLLPPMSGIDLPKEHPLKKIGLNLGENVIKAYDNLKFNEGCEEIF 425 Query: 419 SLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +L+ +++ D Q PW L KK +LY +E +R +A LL +P L++KI+ L Sbjct: 426 TLIRASNKFIDEQAPWTLFKKGEQKEVEKILYGVLESVRLVAYLLAPIIPNLSSKIYKQL 485 Query: 478 -FVADENR--CFQSL---DQRLKPGFMLHKTF----DPIFPRF 510 F D N+ C + + D+ + G + H F PIF + Sbjct: 486 GFSVDFNQVECLEEVIPFDKHSQWGKLAHNNFLSKPQPIFVKL 528 >gi|120602218|ref|YP_966618.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris DP4] gi|120562447|gb|ABM28191.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris DP4] Length = 663 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 197/478 (41%), Positives = 288/478 (60%), Gaps = 12/478 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ Y++T I Y NA+PH+GHAY I+AD + RF RL G D F TGTDEHG KI +AA+ Sbjct: 2 DRFYVTTPIYYVNAKPHLGHAYTTIVADSMRRFQRLLGKDTYFLTGTDEHGDKIVQAAEK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AGV+ K FVD S FRD+ L + YD FIRTT+ H + +++ D GDIY G Y Sbjct: 62 AGVSPKDFVDGVSGQFRDLWPHLGVEYDQFIRTTDPEHKKVVQAFLQRVYDNGDIYFGEY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y E +Y + E+ G Q+ Q P +++ E+ YFFR+S YQ L + +P Sbjct: 122 GGHYCYGCERFYTEKELENGLCPQH---QVKP-EYIAEKNYFFRMSKYQGWLKQHILDNP 177 Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +FI P RNEV+S + SG L+DL +SR WGI++P D Y+ YVW DAL NY++ Sbjct: 178 DFIRPERYRNEVLSMLDSGALEDLCISRPKSRLTWGIELPFDTDYVCYVWFDALLNYVSA 237 Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 G+ PDG + A +WP H++ KDIL+ HA++WP L +A L + HG+ L + Sbjct: 238 LGW---PDGDRFANYWPGVQHLVAKDILKPHAVFWPTMLKAAGLEPYNNLNVHGYWLVRD 294 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKSLGNV+ P+E+I+ G++A RYFL+RE+ G D + ++ L R+NADLAN +GN Sbjct: 295 TKMSKSLGNVVSPLEMIDRYGLNAFRYFLLREMHFGSDASFSEEALVGRLNADLANDLGN 354 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L SR +SM K + G++P PGA+TE DE++ ++ + AL + L Sbjct: 355 LYSRVLSMTAKYFGGVVPAPGAYTEEDETLRALAVEAQRNFCNLFGRVRFSNALESLWEL 414 Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V +++Y D+ PW L K+ + R TV+Y +E +R++A+ L +P+ A + L Sbjct: 415 VRALNKYVDSAAPWTLFKQGDTKRLGTVMYTLLESMRKVAVHLLPVMPEAATSMLAQL 472 >gi|185178808|ref|ZP_02964601.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024305|ref|ZP_02996992.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|195867767|ref|ZP_03079768.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|225551127|ref|ZP_03772073.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|184209436|gb|EDU06479.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018979|gb|EDU57019.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|195660622|gb|EDX53878.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|225378942|gb|EEH01307.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 521 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 201/519 (38%), Positives = 309/519 (59%), Gaps = 10/519 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++K +IST I Y + PHIGHAY IIADVLAR+ RL G DV F TG DEHGQKI + Sbjct: 1 MLKQKKFFISTPIYYSSGNPHIGHAYTTIIADVLARYKRLFGYDVFFLTGMDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A ++ K VD+NS F ++ L IS+ FIRTT+ H ++ + ++ + +G IY Sbjct: 61 KAFEENISPKALVDRNSIIFLNLWKRLHISFSKFIRTTQMDHEESVQKVFSYLYKQGKIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 G ++G+Y + E YN E+ K D + ++ EE YF+++S L +YY Sbjct: 121 LGQWTGYYCVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 ++HP FI+P ER NE+I+ + L+DLS+SR TFDWGI I ++P++++YVW+DAL NYLT Sbjct: 181 QNHPNFIIPNERANEMINNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLT 240 Query: 241 TTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 TGYL N D K+W + +H++ K+I RFH IYWP FL + P + SHG+I Sbjct: 241 ATGYLSNNDELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLNDLQIRFPSTILSHGWI 300 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 + K K+SKSLGNVIDP +I+ GVDALRY+L+ +++ +D + +D L + N LAN Sbjct: 301 ITKEGKMSKSLGNVIDPNVLIDTYGVDALRYYLMADLSLFRDAIFSEDNLIETYNTQLAN 360 Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 GN++SR++ M+ K + ++P G ++DE + ++ ++ ++ ++EN+ I +AL Sbjct: 361 SYGNMISRTLGMLKKYRNNIVPKYVGCVLKNDEKLENLINKNIELVQENINKYSIDKALN 420 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV-TVEVIRQLAILLQAFVPKLANKIF 474 + ++ E ++Y + KPWEL K ++ L V V+VI+ LL + + + K Sbjct: 421 CIQEILVEANKYVEDNKPWELAKNQQEQELDSLLVHLVKVIQVTTTLLSPILIEGSKKAV 480 Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFD--PIFPRFL 511 + L + SL + HK D PIF R + Sbjct: 481 EQLNFDESFLTLASLASYDILNY--HKVNDSKPIFARII 517 >gi|326778239|ref|ZP_08237504.1| methionyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] gi|326658572|gb|EGE43418.1| methionyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] Length = 537 Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust. Identities = 193/481 (40%), Positives = 295/481 (61%), Gaps = 13/481 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y+ST I Y N PH+GHAY + DVL R+HR G V + TGTDEHGQKI + A+ V Sbjct: 15 YVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANNV 74 Query: 68 TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + + D+ ++ + + LDI+ DDFIRTTEKRH D + + + DKG+IYKG Y G Sbjct: 75 TPQAWCDKLVEEAWKPLWEHLDIANDDFIRTTEKRHTDRVQEFVQDLYDKGEIYKGGYEG 134 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y + E Y ++ G +G++ + PV+ ++EE YFF+LS Y KLL +Y Sbjct: 135 PYCVGCEEYKLPGDLIDG-EGEFAGQKLCPIHKKPVELLKEENYFFKLSEYGPKLLEFYA 193 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 ++P+FI P RNEV++FV+ GL+DLS+SR TFDWG+ +P D ++++YVW+DAL NY T Sbjct: 194 ANPDFIQPESARNEVVNFVEQGLQDLSISRSTFDWGVPVPWDDKHVIYVWVDALLNYATA 253 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY N + F PA++H+IGKDILRFH++ WPA L++ LPLP KV ++G+++ GE Sbjct: 254 VGYGANQEKFDGTF-PANVHLIGKDILRFHSVIWPAMLMAQGLPLPGKVVANGWLMVGGE 312 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS I P ++ GVDA R++ +R I+ G DG + + R ++LAN GNL Sbjct: 313 KMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAISYGSDGSFSWEDFSARYTSELANDYGNL 372 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420 SR +M+ K + G +P A +++ ++ ++ + + +L + V Sbjct: 373 ASRVAAMVGKYFGGALPEATAAGDAELAVREGLAKAVATADRKIGEELDFQGGILAVFDF 432 Query: 421 VSEVDRYFDAQKPWELKK-TNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 V +V+ Y Q+PW++ K T+P+ R +TVLY E +R +A+LL +P+ + K+++ Sbjct: 433 VKQVNGYITEQEPWKVAKDTSPEGQARLATVLYTAAESLRGVAVLLHPVMPETSQKLWES 492 Query: 477 L 477 L Sbjct: 493 L 493 >gi|51244638|ref|YP_064522.1| methionyl-tRNA synthetase [Desulfotalea psychrophila LSv54] gi|50875675|emb|CAG35515.1| probable methionyl-tRNA synthetase [Desulfotalea psychrophila LSv54] Length = 645 Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust. Identities = 204/486 (41%), Positives = 292/486 (60%), Gaps = 11/486 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y NAQPH+GHAY I+AD +RF L G DV F TGTDEHG+KI +AA+ G Sbjct: 4 YITTPIYYVNAQPHLGHAYTTIVADTYSRFRHLCGEDVRFQTGTDEHGEKIVEAAEKNGE 63 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 K +VD+ S FR +L I D++IRTT+ H T + + +++ DKGDIY Y+G Sbjct: 64 APKEYVDRISGMFRQTWPILGIEPDNYIRTTDANHIATVQKVLQQVYDKGDIYFDKYTGL 123 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E + + E+ DG+ + Q P Q + E+ YFF++S YQ +LL + ++ +FI Sbjct: 124 YCRGCERFLTEKEL---VDGKCPDHQTAP-QEIAEQNYFFKMSKYQQQLLDHINANEDFI 179 Query: 188 LPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 P RNE++SF+ L+DL +SR WGI++P D ++ YVW DAL NYLT G+ Sbjct: 180 TPHRYRNEMLSFLSEPLEDLCISRPKSRLTWGIELPFDDNFVTYVWFDALINYLTGLGFP 239 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + D KFWP HVI KDIL+ HAI+WP L++ LPL KK+ HG+ K+SK Sbjct: 240 E--DDKYNKFWPVAEHVIAKDILKPHAIFWPTMLMAMELPLYKKLHVHGYWNVDNTKMSK 297 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S+GNV+ P E+++E G+D LRYF +RE++ G D + D + R N+DLAN +GNL SRS Sbjct: 298 SIGNVVRPKELVDEYGLDTLRYFTLREMSFGLDASFSSDAIVSRKNSDLANDLGNLFSRS 357 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +MI K G +P P A E+D ++++ +V+ +E M HRAL V SLV + Sbjct: 358 TAMIQKYRGGKLPAPIA-CEADSELIALSKQVVATYKEEMGAFRFHRALQAVWSLVGYAN 416 Query: 426 RYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +Y + +PW L K R TVLY E +R LA+L++ +P A+++ L +A + Sbjct: 417 KYIVSNEPWALAKDENAWQRLDTVLYNLAECLRFLALLIRPVMPDTASRMATGLGLATDA 476 Query: 484 RCFQSL 489 SL Sbjct: 477 SILNSL 482 >gi|182437585|ref|YP_001825304.1| methionyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466101|dbj|BAG20621.1| putative methionyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 537 Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust. Identities = 193/481 (40%), Positives = 295/481 (61%), Gaps = 13/481 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y+ST I Y N PH+GHAY + DVL R+HR G V + TGTDEHGQKI + A+ V Sbjct: 15 YVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANNV 74 Query: 68 TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + + D+ ++ + + L+I+ DDFIRTTEKRH D + + + DKG+IYKG Y G Sbjct: 75 TPQAWCDKLVEEAWKPLWEHLNIANDDFIRTTEKRHTDRVQEFVQDLYDKGEIYKGGYEG 134 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y + E Y ++ G +G++ + PV+ ++EE YFF+LS Y KLL +Y Sbjct: 135 PYCVGCEEYKLPGDLIDG-EGEFAGQKLCPIHKKPVELLKEENYFFKLSEYGPKLLEFYA 193 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 ++P+FI P RNEV++FV+ GL+DLS+SR TFDWG+ +P D ++++YVW+DAL NY T Sbjct: 194 ANPDFIQPESARNEVVNFVEQGLQDLSISRSTFDWGVPVPWDDKHVIYVWVDALLNYATA 253 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY N + F PA++H+IGKDILRFH++ WPA L++ LPLP KV ++G+++ GE Sbjct: 254 VGYGANQEKFDGTF-PANVHLIGKDILRFHSVIWPAMLMAQGLPLPGKVVANGWLMVGGE 312 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS I P ++ GVDA R++ +R IA G DG + + R ++LAN GNL Sbjct: 313 KMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAIAYGSDGSFSWEDFSARYTSELANDYGNL 372 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420 SR +M+ K + G +P A +++ ++ ++ + + +L + V Sbjct: 373 ASRVAAMVGKYFGGALPEATAAGDAELAVREGLAKAVATADRKIGEELDFQGGILAVFDF 432 Query: 421 VSEVDRYFDAQKPWELKK-TNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 V +V+ Y Q+PW++ K T+P+ R +TVLY E +R +A+LL +P+ + K+++ Sbjct: 433 VKQVNGYITEQEPWKVAKDTSPEGRARLATVLYTAAESLRGVAVLLHPVMPETSQKLWES 492 Query: 477 L 477 L Sbjct: 493 L 493 >gi|256830947|ref|YP_003159675.1| methionyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] gi|256580123|gb|ACU91259.1| methionyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] Length = 648 Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust. Identities = 198/477 (41%), Positives = 289/477 (60%), Gaps = 11/477 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 +IST I Y NA+PH+GH Y I+AD ++RFHRL G F TGTDEHG KI +AA+ AG Sbjct: 4 FFISTPIYYVNARPHLGHGYTTIVADSVSRFHRLKGDATFFLTGTDEHGDKIVQAAEAAG 63 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 K + D S+ F+D+ VL++S D FIRTT+ RH R + + + DKGDIY Y G Sbjct: 64 QDPKTYSDTISQLFKDLWPVLEVSNDQFIRTTDLRHKACVRHVLQTVFDKGDIYFDEYGG 123 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y E +Y D E+ DG+ + Q P +++E+ YFFR+S Y + L Y E++P+F Sbjct: 124 HYCFGCERFYTDKEL---VDGKCPDHQTVPT-FIKEKNYFFRMSKYLEPLREYIEANPDF 179 Query: 187 ILPIERRNEVISFVKSGLKDLSLSR-KT-FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P RNEV+S +K L DL +SR KT WGI++P D ++ YVW DAL NY++ GY Sbjct: 180 IQPERYRNEVLSMLKEDLGDLCISRPKTRLTWGIELPFDSDFVTYVWFDALINYISALGY 239 Query: 245 LDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 PDG K+W H++ KDIL+ HAI+WP L+SA +PL K + HG+ K+ Sbjct: 240 ---PDGEDFRKYWSGAHHLVAKDILKPHAIFWPTMLMSAEIPLYKGLRVHGYWTVNETKM 296 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS+GNV+ P+++ ++ G+ A RYFL+ E++ G+D + +D L R NADLAN +GNL S Sbjct: 297 SKSIGNVVAPLDMAQKYGLSAFRYFLLSEMSFGQDSSFSEDALVGRFNADLANDLGNLFS 356 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 RS+SM K + G++P G + D +L + + + ++ RAL + LV Sbjct: 357 RSLSMTHKYFGGVVPECGELLDLDREVLELGHNAMSNYQSQFEHFQFSRALKSLWELVRH 416 Query: 424 VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +++Y D+ PW L K + +R TVLYV +E +R++A+ L +P + + L V Sbjct: 417 LNKYIDSSAPWTLYKNKDMNRLGTVLYVILEGMRKVAVHLWPVMPSTSETMLTQLGV 473 >gi|16331573|ref|NP_442301.1| methionyl-tRNA synthetase [Synechocystis sp. PCC 6803] gi|2501033|sp|Q55729|SYM_SYNY3 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|1001640|dbj|BAA10371.1| methionyl-tRNA synthetase [Synechocystis sp. PCC 6803] Length = 532 Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust. Identities = 197/489 (40%), Positives = 284/489 (58%), Gaps = 8/489 (1%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y N PH+G AY ++AD LARF RL G DVL TGTDEHGQKI + A+ + Sbjct: 11 VTTPLYYVNDVPHLGSAYTTVVADTLARFKRLQGYDVLMITGTDEHGQKIQRTAEAQELD 70 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D+ F+++ L+I YD F RTT+ RH + ++++ DKGDIY GWY Sbjct: 71 PQTHCDRTVVKFKELWRSLNILYDRFSRTTDPRHLAIVKDFFQRVWDKGDIYLAQQQGWY 130 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + ++ + D + +W +EE YFFRLS YQ L Y PEFI Sbjct: 131 CVACEEFKEKRDLLE--DNHCPLHPNRKAEWRDEENYFFRLSRYQHPLEELYAQRPEFIQ 188 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD-- 246 P RRNEV++FV GL+D S+SR DWG +P+DP + +YVW DAL Y+T D Sbjct: 189 PSSRRNEVLNFVAQGLQDFSISRVNLDWGFPLPNDPNHTIYVWFDALLGYVTALLDEDEE 248 Query: 247 -NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 N + K+WP +LH+IGKDILRFHA+YWPA L+SA L +P +VF HGF+ G+K+ K Sbjct: 249 PNLTNALVKWWPINLHLIGKDILRFHAVYWPAMLMSAELAIPAQVFGHGFLTKDGQKMGK 308 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGN +DP+++I G DA RY+ ++EI GKDG +++ +NADLAN +GNL++R+ Sbjct: 309 SLGNTVDPLDLINRYGEDAFRYYFLKEIEFGKDGDFNEQRFVNVLNADLANDLGNLLNRT 368 Query: 366 VSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + M+ K G P A D + ++ S + +E+ + A + +LV Sbjct: 369 LGMVKKYCQGQGPQVMATDLAPDNPLKALGSHLGEEVSSAYERLSFTDACEAIFTLVRAG 428 Query: 425 DRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADE 482 ++Y D PW+L K+ + VLY +E IR A LL VP+L+ KI+ L F D Sbjct: 429 NKYIDDMAPWKLFKQGSQKEVEDVLYSVLESIRLSAYLLSPIVPRLSTKIYQQLGFTWDF 488 Query: 483 NRCFQSLDQ 491 ++ L+Q Sbjct: 489 DQWRSPLEQ 497 >gi|171920815|ref|ZP_02931489.2| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|188518520|ref|ZP_03003990.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|198273255|ref|ZP_03205791.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554038|ref|YP_002284592.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550469|ref|ZP_03771418.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|171903582|gb|EDT49871.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|188997923|gb|EDU67020.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|198249775|gb|EDY74555.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541539|gb|ACI59768.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379623|gb|EEH01985.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 521 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 200/519 (38%), Positives = 308/519 (59%), Gaps = 10/519 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++K +IST I Y + PHIGHAY IIADVLAR+ RL G DV F TG DEHGQKI + Sbjct: 1 MLKQKKFFISTPIYYSSGNPHIGHAYTTIIADVLARYKRLFGYDVFFLTGMDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A ++ K VD+NS F ++ L IS+ FIRTT+ H ++ + ++ + +G IY Sbjct: 61 KAFEENISPKALVDRNSIIFLNLWKRLHISFSKFIRTTQMDHEESVQKVFSYLYKQGKIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 G ++G+Y + E YN E+ K D + ++ EE YF+++S L +YY Sbjct: 121 LGQWTGYYCVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 ++HP FI+P ER NE+++ + L+DLS+SR TFDWGI I ++P++++YVW+DAL NYLT Sbjct: 181 QNHPNFIIPNERANEMVNNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLT 240 Query: 241 TTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 TGYL N + K+W + +H++ K+I RFH IYWP FL + P + SHG+I Sbjct: 241 ATGYLSNNEELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLNDLQIRFPSTILSHGWI 300 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 + K K+SKSLGNVIDP +I+ GVDALRY+L+ +++ +D + +D L + N LAN Sbjct: 301 ITKEGKMSKSLGNVIDPNVLIDTYGVDALRYYLMADLSLFRDAIFSEDNLIETYNTQLAN 360 Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 GN++SR++ M+ K + ++P G ++DE + ++ ++ ++ ++EN+ I +AL Sbjct: 361 SYGNMISRTLGMLKKYRNNIVPKYVGCVLKNDEKLENLINKNIELVQENINKYSIDKALN 420 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV-TVEVIRQLAILLQAFVPKLANKIF 474 + ++ E ++Y + KPWEL K + L V V+VI+ LL + + + K Sbjct: 421 CIQEILVEANKYVEDNKPWELAKNQQKQELDSLLVHLVKVIQVTTTLLSPILIEGSKKAV 480 Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFD--PIFPRFL 511 + L + SL F HK D PIF R + Sbjct: 481 EQLNFDESFLTLASLASY--DIFNYHKVNDSKPIFARII 517 >gi|188524069|ref|ZP_03004160.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195659982|gb|EDX53362.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] Length = 521 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 200/519 (38%), Positives = 308/519 (59%), Gaps = 10/519 (1%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++K +IST I Y + PHIGHAY IIADVLAR+ RL G DV F TG DEHGQKI + Sbjct: 1 MLKQKKFFISTPIYYSSGNPHIGHAYTTIIADVLARYKRLFGYDVFFLTGMDEHGQKIQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A ++ K VD+NS F ++ L IS+ FIRTT+ H ++ + ++ + +G IY Sbjct: 61 KAFEENISPKALVDRNSIIFLNLWKRLHISFSKFIRTTQMDHEESVQKVFSYLYKQGKIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 G ++G+Y + E YN E+ K D + ++ EE YF+++S L +YY Sbjct: 121 LGQWTGYYCVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYY 180 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 ++HP FI+P ER NE+++ + L+DLS+SR TFDWGI I ++P++++YVW+DAL NYLT Sbjct: 181 QNHPNFIIPNERANEMVNNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLT 240 Query: 241 TTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 TGYL N + K+W + +H++ K+I RFH IYWP FL + P + SHG+I Sbjct: 241 ATGYLSNNEELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLNDLQIRFPSTILSHGWI 300 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 + K K+SKSLGNVIDP +I+ GVDALRY+L+ +++ +D + +D L + N LAN Sbjct: 301 ITKEGKMSKSLGNVIDPNVLIDTYGVDALRYYLMADLSLFRDAIFSEDNLIETYNTQLAN 360 Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 GN++SR++ M+ K + ++P G ++DE + ++ ++ ++ ++EN+ I +AL Sbjct: 361 SYGNMISRTLGMLKKYRNNIVPKYVGCVLKNDEKLENLINKNIKLVQENINKYSIDKALN 420 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV-TVEVIRQLAILLQAFVPKLANKIF 474 + ++ E ++Y + KPWEL K + L V V+VI+ LL + + + K Sbjct: 421 CIQEILVEANKYVEDNKPWELAKNQQKQELDSLLVHLVKVIQVTTTLLSPILIEGSKKAV 480 Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFD--PIFPRFL 511 + L + SL F HK D PIF R + Sbjct: 481 EQLNFDESFLTLASLASY--DIFNYHKVNDSKPIFARII 517 >gi|317152912|ref|YP_004120960.1| methionyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] gi|316943163|gb|ADU62214.1| methionyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] Length = 658 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 198/481 (41%), Positives = 297/481 (61%), Gaps = 12/481 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E+ YI+T I Y NA+PH+GHAY +AD L RFH L G + F TGTDEHG KI +AA+ Sbjct: 2 ERFYITTPIYYVNAKPHLGHAYTTTVADSLRRFHSLMGEETYFLTGTDEHGDKIVQAAEA 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G + + +VD S F+ + ++IS DDFIRTTE RH + + +K+ D GDIY G Y Sbjct: 62 NGQSPRDYVDAVSGLFKALLPDMNISNDDFIRTTEPRHIKVVQSILQKVHDSGDIYFGEY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y E +Y + E+ DG + Q P +++ E+ YFFR+S YQ L + ++P Sbjct: 122 GGHYCFGCERFYTEKEL---VDGLCPDHQTKP-EYIAEKNYFFRMSKYQGWLKEHIRTNP 177 Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +FI P + RNEV+S ++SG L+DL +SR WGI++P D +++ YVW DAL NYL+ Sbjct: 178 DFIRPEQYRNEVLSLLESGELEDLCISRPKSRLTWGIELPFDSEFVTYVWFDALINYLSA 237 Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY PDG K KFWPA H++ KDIL+ HA++WP L +A + + + HG+ L K Sbjct: 238 LGY---PDGDKFKKFWPAANHLVAKDILKPHAVFWPTMLKAAGIEPYQSLNVHGYWLVKD 294 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKS+GNVI+P+ + ++ G+DA RYFL+RE++ G+D + ++ L R+NADLAN +GN Sbjct: 295 TKMSKSIGNVIEPLAIKDKYGLDAFRYFLLREMSFGQDSSFSEEALVGRLNADLANDLGN 354 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L +R++SM K + G+IP+P A D I + ++ + + + R L + L Sbjct: 355 LFNRTLSMTHKYFGGVIPSPDAEEIMDAEIKKLGQDSMRAFQAHFSDLRFSRGLESLWEL 414 Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 V +++Y D PW L K N R STV+YV +E +R++A+ L +P+ + + L + Sbjct: 415 VRGLNKYIDTSAPWTLFKAGNTGRLSTVIYVLLENMRKIAVHLWPVMPESSESMLKQLGI 474 Query: 480 A 480 + Sbjct: 475 S 475 >gi|122919781|pdb|2D54|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225a Mutant From Thermus Thermophilus Length = 502 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 199/486 (40%), Positives = 292/486 (60%), Gaps = 16/486 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y NA+PH+GHAY ++AD LAR+HRLDG F TGTDEHG+ + +AAQ AG Sbjct: 5 FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 K FVD+ S F+ D+L I+YDDFIRTTE+RH +++ KK+ + GDIY G Y G Sbjct: 65 EDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y + E +Y + E+ +G PV+ +E YFFR+ Y+ L Y + +P+ Sbjct: 125 LYCVSCERFYTEKELVEG----LCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDL 180 Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P RNEV++ + + DLS+SR WGI +P D ++ VW DAL NY++ Sbjct: 181 IRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTAVWFDALLNYVSA--- 237 Query: 245 LDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302 LD P+G + FWP H+IGKDIL+ HA++WP L +A +P+ + + GF+L G K Sbjct: 238 LDYPEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRK 297 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SK+LGNV+DP ++E+ G DALRY+L+REI G+D ++ L+ R ADLA+ +GNLV Sbjct: 298 MSKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLV 357 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R+ +M+ + +G IP P A E E + R+ +RE H AL + ++ V Sbjct: 358 QRTRAMLFRFAEGRIPEPVAGEELAEGT-GLAGRLRPLVRELK----FHVALEEAMAYVK 412 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++RY + +KPWEL K P+ A VLY VE +R +ILL +P ++ L + +E Sbjct: 413 ALNRYINEKKPWELFKKEPEEARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEE 472 Query: 483 NRCFQS 488 R ++ Sbjct: 473 VRLEEA 478 >gi|229823542|ref|ZP_04449611.1| hypothetical protein GCWU000282_00840 [Catonella morbi ATCC 51271] gi|229786986|gb|EEP23100.1| hypothetical protein GCWU000282_00840 [Catonella morbi ATCC 51271] Length = 640 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 196/489 (40%), Positives = 293/489 (59%), Gaps = 12/489 (2%) Query: 34 LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93 + R+ RL G D F TGTDEHGQKI + A+ GV+ K +VD+ + + + +LDI Y Sbjct: 1 MTRYKRLQGFDAFFLTGTDEHGQKIERTAEGLGVSPKQYVDEMADIIKKLWALLDIDYSH 60 Query: 94 FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD---EVYKGADGQYY 150 FIRTT+ H + ++++ + DIY G YSGWYS+ DE ++ ++ EVY+ ADG Sbjct: 61 FIRTTDDYHEKAVQDAFEQLLAQDDIYLGEYSGWYSVSDEEFFTENQLVEVYRDADGNVT 120 Query: 151 NA---QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKD 206 N V ++EE YFFR+S Y D+L+ YYE H +F+ P R+ E+I+ F+K GL+D Sbjct: 121 GGVAPTGNEVTLVKEESYFFRMSKYADRLVQYYEDHADFLEPAFRKTEMINNFIKPGLED 180 Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266 L++SR TF WG+ + +P++++YVWIDAL NY+T GY + K+WPAD HVIGKD Sbjct: 181 LAVSRTTFTWGVPVKSNPKHVIYVWIDALLNYITALGYGSDDTSRYNKYWPADAHVIGKD 240 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I RFH IYWP L++ LPLPKK+F+HG+ L K K+SKS GNVI P ++E G+DA R Sbjct: 241 ISRFHMIYWPTILMALGLPLPKKIFAHGWYLMKEGKMSKSKGNVIYPETLVERYGLDATR 300 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTE 385 ++L+ E+ G D + +G + VN++LAN +GNL++R+V+M+ K + G +PT G T Sbjct: 301 FYLLHEMGVGNDAVFTPEGFVQLVNSELANDLGNLLNRTVAMMNKYFQGQVPTEGLEATA 360 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DR 443 D + + + M + AL+ V+ +VS ++Y D PW L K + Sbjct: 361 VDADYDAYVKEQIAAYYQAMDAMSLSAALSHVMDIVSRTNKYIDETMPWVLVKEEATLGQ 420 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-NRCFQSLDQRLKP-GFMLHK 501 +V+ E +R +A L + F+ + KIF+ L ++D+ + F L P G + Sbjct: 421 LRSVMNHLAEALRLVAHLSRPFMTQAPAKIFEQLGLSDQMDLDFTQLVYGAFPAGASVVA 480 Query: 502 TFDPIFPRF 510 PIFPR Sbjct: 481 KGTPIFPRL 489 >gi|82539458|ref|XP_724116.1| methionyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL] gi|23478651|gb|EAA15681.1| methionyl-tRNA synthetase [Plasmodium yoelii yoelii] Length = 882 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 193/478 (40%), Positives = 295/478 (61%), Gaps = 11/478 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + YI+TAI+Y N +PHIGHAYE+I+AD +AR+HR G D+ FTTG DEHG KIA A Sbjct: 216 KNDNFYITTAISYVNGEPHIGHAYEIILADAIARYHRNLGRDIFFTTGADEHGLKIANQA 275 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 +T + D N F+ + L + D ++RTT H + +W K + GDIY G Sbjct: 276 LRNNMTPQELCDLNVIKFKKLNKDLHTTEDYYVRTTADIHKKIAQSIWMKCVENGDIYLG 335 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y GWY++R+E Y ++E Y + +N ++ M+E YFFR+S YQD+LL Y Sbjct: 336 EYEGWYNVREETYIPENE---AKLMNYIDPLNNVKLEKMKEPSYFFRMSKYQDRLLQYIH 392 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +P+FI P + RNE++ +K L+DLS SR F WGI +P+DP+++MYVW+DAL NY ++ Sbjct: 393 DNPDFIQPEKNRNEILQRLKEPLEDLSCSRTKFTWGIPVPNDPKHVMYVWMDALINYYSS 452 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KG 300 +++N + K K+WPAD+H+IGKDI+ FHA+ +P L+SAN+ LPK VFSHGF+L G Sbjct: 453 C-FINNQE--KVKYWPADIHIIGKDIVWFHAVIFPTILMSANIELPKCVFSHGFVLAGDG 509 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKSL NVIDP E+IE G DA R+ +V+E G D +D D L N+DLA+ IGN Sbjct: 510 KKMSKSLKNVIDPKEIIESYGSDAFRFHVVKESKRGYDMRFDVDNLVDMCNSDLADTIGN 569 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 LV R++S+ + + IP + + D + + I M+N IH+ + +++ Sbjct: 570 LVQRTLSLCILSNNAKIPP--LYDDIDIDLPFCMLHFINRIEYYMKNFHIHKFCEKTVNV 627 Query: 421 VSEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +++++ PW+ K ++ ++ ++ + +E I +A + VP +A+ IF L Sbjct: 628 CKDLNKFLTDLAPWKYKEESEKNKKLHIIRLMLESIYFIAHYIDIVVPMIASNIFSQL 685 >gi|239942576|ref|ZP_04694513.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] gi|239989037|ref|ZP_04709701.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379] gi|291446038|ref|ZP_06585428.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] gi|291348985|gb|EFE75889.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] Length = 537 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 190/481 (39%), Positives = 296/481 (61%), Gaps = 13/481 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y+ST I Y N PH+GHAY + DVL R+HR G V + TGTDEHGQKI + A+ V Sbjct: 15 YVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANDV 74 Query: 68 TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + + D+ ++ + + L+I+ DDFIRTTEKRH D + + + DKG+IYKG Y G Sbjct: 75 TPQAWADKLVEEAWKPLWEHLNIANDDFIRTTEKRHTDRVQEFVQDLYDKGEIYKGGYEG 134 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y + E Y ++ G +G++ + PV+ ++EE YFF+LS Y KLL +Y Sbjct: 135 PYCVGCEEYKLPGDLIDG-EGEFAGQKLCPIHKKPVELLKEENYFFKLSEYGPKLLEFYA 193 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 ++P+FI P RNEV++FV+ GL+DLS+SR TFDWG+ +P D ++++YVW+DAL NY T Sbjct: 194 ANPDFIQPESARNEVVNFVEQGLQDLSISRSTFDWGVPVPWDDKHVIYVWVDALLNYATA 253 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY N + F PA++H+IGKDILRFH++ WPA L++ LPLP KV ++G+++ GE Sbjct: 254 VGYGANQEKFDGTF-PANVHLIGKDILRFHSVIWPAMLMAQGLPLPGKVVANGWLMVGGE 312 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS I P ++ GVDA R++ +R I+ G DG + + R ++LAN GNL Sbjct: 313 KMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAISYGSDGSFSWEDFSARYTSELANDYGNL 372 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420 SR +M+ K + G +P A ++++++ ++ + + +L + + Sbjct: 373 ASRVAAMVGKYFGGALPQDTAAGDAEQAVRDGLAKAVATADRKIGEELDFQGGILAIFDF 432 Query: 421 VSEVDRYFDAQKPWELKK-TNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 V +V+ Y Q+PW++ K T P+ R +T+LY E +R +A+LL + +P+ + K+++ Sbjct: 433 VKQVNGYITEQEPWKVAKDTTPEGQARLATILYTAAESLRGVAVLLNSVMPETSQKLWES 492 Query: 477 L 477 L Sbjct: 493 L 493 >gi|323698358|ref|ZP_08110270.1| methionyl-tRNA synthetase [Desulfovibrio sp. ND132] gi|323458290|gb|EGB14155.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans ND132] Length = 650 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 198/481 (41%), Positives = 296/481 (61%), Gaps = 12/481 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ YI+T I Y NA+PH+GHAY +AD L RFH+L G + F TGTDEHG KI +AA++ Sbjct: 2 QRFYITTPIYYVNAKPHLGHAYTTTVADSLNRFHKLMGEETYFLTGTDEHGDKIVQAAES 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G T + +VD S+ FRD+ ++IS +DFIRTTE RH + + +K+ D GDIY G Y Sbjct: 62 NGQTPQEYVDVISKLFRDLWPNMNISNNDFIRTTEPRHKAVVQQILQKVYDAGDIYFGEY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y E +Y + E+ DG + P +++ E+ YFF++S Y+D LL + HP Sbjct: 122 GGHYCFGCERFYTEKEL---VDGLCPDHLTKP-EYIAEKNYFFKMSKYRDWLLDHINKHP 177 Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +FI P RNEV+S ++SG L+DL +SR WGI++P D Y+ YVW DAL NY+ Sbjct: 178 DFIRPERYRNEVVSLLESGELEDLCISRPKSRLTWGIELPFDADYVTYVWFDALINYVAA 237 Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 G+ PDG K KFWPA H++ KDIL+ HAI+WP L +A + + + HG+ L + Sbjct: 238 LGW---PDGEKFKKFWPAANHMVAKDILKPHAIFWPTMLKAAGIEPYQHLNVHGYWLVED 294 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKS+GNV++P+ + + G+DA RYFL+RE++ G+D + + L R+NADLAN +GN Sbjct: 295 TKMSKSIGNVVEPLAMKDAYGLDAFRYFLLREMSFGQDSSFSEKALVGRLNADLANDLGN 354 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L +R++SM K + G IP P D I + +Q ++ + RAL + L Sbjct: 355 LFNRTLSMTHKYFGGKIPRPDVEDVVDAEIKKIGQDAMQSFQDFFTDLKFSRALEGLWEL 414 Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 V +++Y D PW L K+ N R STV+YV +E +R++A+ L +P+ + ++ + L + Sbjct: 415 VRGLNKYIDETAPWALFKEKNTGRLSTVIYVLLENMRKIAVHLWPVMPEASERMLEQLGI 474 Query: 480 A 480 Sbjct: 475 T 475 >gi|300867846|ref|ZP_07112488.1| methionyl-tRNA synthetase [Oscillatoria sp. PCC 6506] gi|300334177|emb|CBN57664.1| methionyl-tRNA synthetase [Oscillatoria sp. PCC 6506] Length = 535 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 190/489 (38%), Positives = 288/489 (58%), Gaps = 14/489 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++T + Y N PH+G AY + AD ARF RL G VL TGTDEHGQKI + A+ Sbjct: 8 KDTFALTTPLYYVNDLPHVGSAYTTMAADAAARFERLRGKSVLLITGTDEHGQKIQRTAE 67 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 + G + + D + F + + L+I Y+ F RTT RH + ++++ + GDIY Sbjct: 68 SVGRSPQAHCDLIAAGFESLWEQLNIQYNRFSRTTAPRHQFIVKEFFQRVWEAGDIYLSQ 127 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY + E + + ++ G + ++ V+W +EE YFFRLS YQ +L YE Sbjct: 128 QQGWYCVSCEEFKEERDLLPGKRCPIHTSKE--VEWRDEENYFFRLSRYQAQLQELYEQR 185 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P RRNEV+ FV +GL+D S+SR DWG+ +P D ++ +YVW DAL Y+T Sbjct: 186 PDFIQPKSRRNEVLKFVSTGLQDFSISRINLDWGLPVPADDRHTIYVWFDALLGYITA-- 243 Query: 244 YLDNPDGSK------AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 L +PD +K+WP DLH+IGKDILRFHA+YWPA L+SANLP+P ++F HGF+ Sbjct: 244 -LLDPDSEPTLENALSKWWPIDLHLIGKDILRFHAVYWPAMLMSANLPMPGRIFGHGFLT 302 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 G K+ K+ GN+IDP+ ++ + G DA+RY+ ++EI G+DG +++ +NADLAN Sbjct: 303 KDGRKMGKTDGNIIDPVALVNQYGSDAVRYYFLKEIEFGEDGDFNEARFIDTLNADLAND 362 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE-IRENMQNQLIHRALAQ 416 +GNLV+R++SM K G+IP A + ++ L L + + +N +A Sbjct: 363 LGNLVNRTLSMAHKYCGGLIPNVNAEDIAPDNPLKEIGLTLSDRTAQAYENLAFSQACEA 422 Query: 417 VISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 +++LV +++ D PW L K+ + VLY +E +R A LL +P +++ I+ Sbjct: 423 ILALVQAGNKFIDFSAPWSLYKQGKLEAVEKVLYPVLESVRLAAYLLSPIIPNISSAIYQ 482 Query: 476 IL-FVADEN 483 L F D N Sbjct: 483 QLGFAIDFN 491 >gi|290559069|gb|EFD92442.1| methionyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 483 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 198/475 (41%), Positives = 292/475 (61%), Gaps = 23/475 (4%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I Y N +PHIGHAY +ADV AR++RL+G +V F TGTDEHG KI K+A Sbjct: 3 KFYITTPIYYVNDKPHIGHAYTTFVADVFARWYRLNGENVFFLTGTDEHGGKIEKSALEK 62 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T K VD+NS +R + + L+ISY+ FIRTT+ H ++ +K+ D GDIYKG Y+ Sbjct: 63 GKTPKELVDENSDKYRQVWEKLNISYNRFIRTTDYSHEKAVKLFLQKVWDNGDIYKGEYT 122 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G+Y L DE Y + E+ DG+ VQ + EE YFFRLS Y+DK++ + Sbjct: 123 GFYCLPDERYITESEL---LDGKCPTCGRE-VQKISEEAYFFRLSKYKDKIVDAITNG-- 176 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI+P + NE++S + LKDL ++RK WGIK P D + +YVW DAL NYL+ L Sbjct: 177 FIIPEKNANEILSRLNGELKDLDITRKNVSWGIKFPFDESHSVYVWFDALINYLSG---L 233 Query: 246 DNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D PDG K FWPAD+H++GK+I+ FH++ WPA L SA +P+PK++ +H + G+K+S Sbjct: 234 DWPDGENVKTFWPADIHLVGKEIVWFHSVIWPAMLFSAGIPVPKRIVAHAWWTVDGKKMS 293 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS+GNV++PI+++E+ G DA RYFL+RE DG + + LK R+N +L + + NLV+R Sbjct: 294 KSIGNVVNPIDMVEKYGADAFRYFLIREKPVWDDGDFSESALKNRINGELMSDLSNLVAR 353 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 +++ K + P DE +++R N + A+ + + +V Sbjct: 354 VLTLAEKFKGKITGNPDLEGFIDE----------EKVRAAFDNYDPYSAINLIFEGIRKV 403 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 ++YF+ +KPW L+ + S VLY +E IR ++I L F+P+ + KI +L V Sbjct: 404 NKYFNDKKPWTLEGED---LSNVLYNAIEAIRIISIFLSPFMPETSEKIERMLSV 455 >gi|86153308|ref|ZP_01071512.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843034|gb|EAQ60245.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13] Length = 628 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 195/470 (41%), Positives = 294/470 (62%), Gaps = 11/470 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PH+GHAY IIAD LARF+RL G + F TGTDEHGQKI +AA+ Sbjct: 3 YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + + D+ S F+ + D +I+YD + RTT+ RH + + ++ K+ KGDIYK Y G Sbjct: 63 TPQEYADKISFEFKKLWDDFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E+++ ++ Q + ++EE YFF+LS YQDK+L +YE + I Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQ---TRILKEESYFFKLSKYQDKILQWYE-EKDPI 178 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244 LP ++NE+I+FV+SGLKDLS++R +FDWGIK+P +D ++I+YVW+DAL Y+++ + Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYISSLDF 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 G AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+ +GEK+S Sbjct: 239 --QSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+ P EV++ G +A RYFL+RE+ G DG + ++ L R+NA+L+N GNL++R Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + M K G I G + L+ L E ++N +R L ++ +S Sbjct: 357 IIGMSTKYSQGNILKEGVLKFYNTE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415 Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + +PW L K N ++A+ ++ + ++ + ++LL +PK K+ Sbjct: 416 NLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPTLPKSCQKV 465 >gi|86152046|ref|ZP_01070258.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94] gi|315124355|ref|YP_004066359.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85840831|gb|EAQ58081.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94] gi|315018077|gb|ADT66170.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 628 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 195/470 (41%), Positives = 294/470 (62%), Gaps = 11/470 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PH+GHAY IIAD LARF+RL G + F TGTDEHGQKI +AA+ Sbjct: 3 YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + + D+ S F+ + D +I+YD + RTT+ RH + + ++ K+ KGDIYK Y G Sbjct: 63 TPQEYADKISFEFKKLWDDFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E+++ ++ Q + ++EE YFF+LS YQDK+L +YE + I Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQ---TRILKEESYFFKLSKYQDKILQWYE-EKDPI 178 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244 LP ++NE+I+FV+SGLKDLS++R +FDWGIK+P +D ++I+YVW+DAL Y+++ + Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYISSLDF 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 G AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+ +GEK+S Sbjct: 239 --QSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+ P EV++ G +A RYFL+RE+ G DG + ++ L R+NA+L+N GNL++R Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + M K G I G + L+ L E ++N +R L ++ +S Sbjct: 357 IIGMSTKYSQGNILKEGVLKFYNTE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415 Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + +PW L K N ++A+ ++ + ++ + ++LL +PK K+ Sbjct: 416 NLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPTLPKSCQKV 465 >gi|86150271|ref|ZP_01068498.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597490|ref|ZP_01100724.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25] gi|218562466|ref|YP_002344245.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|25009405|sp|Q9PP85|SYM_CAMJE RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|85839387|gb|EAQ56649.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190082|gb|EAQ94057.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25] gi|112360172|emb|CAL34966.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926083|gb|ADC28435.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902] Length = 628 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 194/470 (41%), Positives = 296/470 (62%), Gaps = 11/470 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PH+GHAY IIAD LARF+RL G + F TGTDEHGQKI +AA+ Sbjct: 3 YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + + D+ S F+ + D +I+YD + RTT+ RH + + ++ K+ KGDIYK Y G Sbjct: 63 TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFIKAMFLKMWQKGDIYKDEYEGH 122 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E+++ ++ Q + ++EE YFF+LS YQDK+L +YE + I Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQ---TRILKEESYFFKLSKYQDKILQWYE-EKDPI 178 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244 LP ++NE+I+FV++GLKDLS++R +FDWGIK+P +D ++I+YVW+DAL Y+++ + Sbjct: 179 LPKNKKNELINFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYVSSLDF 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + G AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+ +GEK+S Sbjct: 239 QNK--GENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+ P EV++ G +A RYFL+RE+ G DG + ++ L R+NA+L+N GNL++R Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + M K G I G + L+ L E ++N +R L ++ +S Sbjct: 357 IIGMSTKYSQGNISKEGVLKFYNAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415 Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + +PW L K N ++A+ ++ + ++ + ++LL +PK + K+ Sbjct: 416 NLAISKYEPWSLIKENKHEQANALVALCANILAKTSLLLSPTLPKSSQKV 465 >gi|307747746|gb|ADN91016.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1] Length = 628 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 197/470 (41%), Positives = 295/470 (62%), Gaps = 11/470 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PH+GHAY IIAD LARF+RL G + F TGTDEHGQKI +AA+ Sbjct: 3 YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + + D+ S F+ + D +I+YD + RTT+ RH + + ++ K+ KGDIYK Y G Sbjct: 63 TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E+++ ++ D + N ++EE YFF+LS YQDK+L +YE + I Sbjct: 123 YCISCESFFTQSQLIN--DCSCPDCGKNTT-ILKEESYFFKLSKYQDKILQWYE-EKDPI 178 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244 LP ++NE+I+FV+SGLKDLS++R +FDWGIK+P +D ++I+YVW+DAL Y+++ + Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYISSLDF 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 G AKFWPA +H+IGKDILRFHAIYWPAFL+S +LPLPK + +HG+ +GEK+S Sbjct: 239 --QSKGENAKFWPAHVHLIGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+ P EV++ G +A RYFL+RE+ G DG + ++ L R+NA+L+N GNL++R Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + M K G I G + L+ L E ++N +R L ++ +S Sbjct: 357 IIGMSTKYSQGNILKEGVLKYYNTE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415 Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + +PW L K N ++A+ ++ + ++ + ++LL +PK K+ Sbjct: 416 NLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPTLPKSCEKV 465 >gi|291277617|ref|YP_003517389.1| methionyl-tRNA synthetase [Helicobacter mustelae 12198] gi|290964811|emb|CBG40667.1| methionyl-tRNA synthetase [Helicobacter mustelae 12198] Length = 639 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 203/480 (42%), Positives = 299/480 (62%), Gaps = 19/480 (3%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K +I+T I Y N PHIGHAY I+AD+L +++ L G + TGTDEHGQKI ++AQ Sbjct: 2 KKFITTPIYYVNDVPHIGHAYTNILADMLKKYYTLLGEETFLLTGTDEHGQKIEQSAQKK 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 T K + DQ S+ FR++ D I YD F+RTT+ H + + K+ KGDIYKG Y Sbjct: 62 HQTPKAYADQISQEFRNLWDYFGIDYDHFVRTTDASHIKGVQEAFSKMYQKGDIYKGEYE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y + E+++ ++ DG+ + N ++EE YFF LS YQDKLL +YE + Sbjct: 122 GNYCISCESFFAPSQLL---DGKCPDCGRN-TNLIKEESYFFALSKYQDKLLQWYEKS-D 176 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD---PQYIMYVWIDALTNYLTTT 242 I P R+NEVI+FVK+GL DLS++R +F WGI +P D P++I+YVW+DAL NY+T Sbjct: 177 CIFPRFRKNEVINFVKNGLNDLSITRTSFAWGIPLPKDLQEPRHIIYVWLDALLNYITAL 236 Query: 243 GYLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY PD + K FW + ++GKDILRFHAIYWPAFL+S LPLPK + +HG+ L +G+ Sbjct: 237 GY---PDANFQKDFWENAIQIVGKDILRFHAIYWPAFLMSLELPLPKVICAHGWWLIEGK 293 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV++P EV E+ G++ LRYFL+RE++ G DG + K L +R+N DLAN +GNL Sbjct: 294 KMSKSLGNVVNPKEVGEDYGIEHLRYFLLREVSFGNDGNFAKKSLAQRINTDLANDLGNL 353 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 +SR++ M K + + + E + I + +R L+ + +Q L ++ +L Sbjct: 354 LSRTLGMAEKYFALHLSGEFSLYEEKKQIEQILAR-LEPLMNEIQPSSYLEELWKIFTLA 412 Query: 422 -SEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 S + +Y +PW L K +A+ ++L V ++ + A+ L +P+ A KI + + Sbjct: 413 NSLIPKY----EPWNLMKQGQIKATASLLLVIGNILIKGALCLYPIMPETAQKILSVFGI 468 >gi|157415105|ref|YP_001482361.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116] gi|157386069|gb|ABV52384.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116] Length = 628 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 196/470 (41%), Positives = 295/470 (62%), Gaps = 11/470 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PH+GHAY IIAD LARF+RL G + F TGTDEHGQKI +AA+ Sbjct: 3 YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + + D+ S F+ + D +I+YD + RTT+ RH + + ++ K+ KGDIYK Y G Sbjct: 63 TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E+++ ++ D + N ++EE YFF+LS YQDK+L +YE + I Sbjct: 123 YCISCESFFTQSQLIN--DCSCPDCGKNTT-ILKEESYFFKLSKYQDKILQWYE-EKDPI 178 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244 LP ++NE+I+FV+SGLKDLS++R +FDWGIK+P +D ++I+YVW+DAL Y+++ + Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYISSLDF 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 G AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+ +GEK+S Sbjct: 239 --QSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+ P EV++ G +A RYFL+RE+ G DG + ++ L R+NA+L+N GNL++R Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + M K G I G + L+ L E ++N +R L ++ +S Sbjct: 357 IIGMSTKYSQGNILKEGVLKYYNTE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415 Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + +PW L K N ++A+ ++ + ++ + ++LL +PK K+ Sbjct: 416 NLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPTLPKSCEKV 465 >gi|225620506|ref|YP_002721763.1| methionyl-tRNA synthetase [Brachyspira hyodysenteriae WA1] gi|225215325|gb|ACN84059.1| methionyl-tRNA synthetase [Brachyspira hyodysenteriae WA1] Length = 651 Score = 368 bits (945), Expect = e-99, Method: Compositional matrix adjust. Identities = 206/519 (39%), Positives = 312/519 (60%), Gaps = 18/519 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I YP+ HIGH Y I D +AR+ ++ G DV F TGTDEHG+KIA+ A+ Sbjct: 4 KKFYITTPIYYPSDYLHIGHCYCTIATDTMARYKKIMGYDVYFLTGTDEHGEKIARKAEA 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG T K +VD +++ L I Y +IRTT+ H + ++K + DKG IYKG Y Sbjct: 64 AGTTPKAYVDNIVNATKELWKRLHIDYSHYIRTTDDYHERRVQKIFKILYDKGYIYKGSY 123 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 G Y + DEA++ + +V K DG++Y +++ EEE Y+ +LS Y L+ YY+ H Sbjct: 124 KGLYCVSDEAFFTESQVVKKDDGKFYCPDCEKELEYKEEECYYLKLSEYGQWLIDYYKEH 183 Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEF+ P ER+NE++ +F+ GL+DL++SRK WGI P D ++ +YVWIDAL NY+T Sbjct: 184 PEFLEPKERQNEMLKNFLLPGLEDLAVSRKGLQWGIPCPVDSEHSIYVWIDALANYITAL 243 Query: 243 GY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KG 300 GY + D K+WPAD+H +GK+I+RFHAI WP L ++PLPKKV+ HG++L G Sbjct: 244 GYPEEGQDELYKKYWPADVHFVGKEIVRFHAIIWPIMLKMLDIPLPKKVYGHGWVLFDDG 303 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKS GNV+DP +I++ GVDALRYFL+REI G DG+Y ++ KR+N+DLAN GN Sbjct: 304 KKMSKSSGNVVDPNTLIDKYGVDALRYFLMREINFGSDGYYSQELFLKRINSDLANDYGN 363 Query: 361 LVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 L R +M+ K ++ ++P + + ++ + + + + + + H AL+ + Sbjct: 364 LWHRITTMLGKYFNNILPDEVESVYGDREKELKKMVLTLDANVESALDSYKFHEALSYIW 423 Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 ++ ++Y + PW L K T D + V+Y++ +V + LQ F K+F+ Sbjct: 424 EVIRMTNKYVEESAPWNLAKDETKKDHLANVMYISFQVYYIVTAYLQIFFIDTPKKVFNR 483 Query: 477 LFVADENRCFQSLDQ-----RLKPGFMLHKTFDPIFPRF 510 L + D SLD LK G + K +P+F R+ Sbjct: 484 LGLGDS----VSLDTAKQWGSLKAGIKIEKG-EPLFNRY 517 >gi|258404453|ref|YP_003197195.1| methionyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] gi|257796680|gb|ACV67617.1| methionyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] Length = 648 Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 193/476 (40%), Positives = 286/476 (60%), Gaps = 11/476 (2%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + YI+T I Y NA PH+GHAY I+AD + RFHRL G + F TGTDEHG KI +AA++A Sbjct: 3 RYYITTPIYYVNANPHLGHAYTTIVADCVNRFHRLLGQETFFLTGTDEHGDKIVQAAEDA 62 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G + + +VD+ S F+ L+IS D FIRTT+ H D + +++ D GDIY G Y Sbjct: 63 GQSPQEYVDRISSKFQQQLPDLNISNDRFIRTTDSDHKDCVQRFLQQVYDNGDIYFGEYG 122 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G+Y E +Y + E+ G + P +++EE+ YFFR+ YQD L+ Y + +P Sbjct: 123 GYYCFGCERFYTEKELVDGLCPDHLK----PPKYIEEKNYFFRMQKYQDWLVQYIQDNPG 178 Query: 186 FILPIERRNEVISFVKSGLKDLSLSR-KT-FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 FI P RNEV+ ++ L DL +SR KT WGI++P D +Y+ YVW DAL NY+T G Sbjct: 179 FIQPERYRNEVLGMLREPLDDLCISRPKTRLTWGIELPFDDRYVTYVWFDALINYITALG 238 Query: 244 YLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 + PDG + + FWP H++ KDIL+ HAI+WP L +A L + + HG+ K Sbjct: 239 W---PDGDRYRQFWPVAHHLVAKDILKPHAIFWPTMLKAAGLEPYQGLHVHGYWTVNETK 295 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKSLGNV+ P+ + + G+D RYFL+RE+ G D + ++GL R NADLAN +GNL Sbjct: 296 MSKSLGNVVAPLTMRDTYGLDGFRYFLLREMQFGLDASFSEEGLVARFNADLANDLGNLF 355 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 +R+++M K + G +P+PGA + D +I + R +Q ++ ++ L Q+ LV Sbjct: 356 NRALAMTHKYFGGRVPSPGALEDEDHAIRQLGVRAVQGYVDSGKSFAFAAGLRQLWDLVR 415 Query: 423 EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +++Y DA PW L K +R TV+Y +E +RQ+A+ L +P + + L Sbjct: 416 GLNKYIDATAPWTLYKAGETERLGTVMYTVLEGMRQVALALWPVMPDASGSMLQQL 471 >gi|227486182|ref|ZP_03916498.1| methionine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] gi|227235813|gb|EEI85828.1| methionine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] Length = 650 Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 195/491 (39%), Positives = 301/491 (61%), Gaps = 10/491 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +R+ YI+T I YPN+ HIG+ Y IIADVL R+ L G + TGTDEHGQKI + Sbjct: 1 MTDRKPYYITTPIYYPNSNLHIGNTYTSIIADVLKRYKTLLGYEAYLVTGTDEHGQKIME 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 +A G + FVD+ + + + LDI+YD FIR+T K+H ++ K+ ++GDIY Sbjct: 61 SAHAHGKEPQEFVDKIAAETIKLWEKLDINYDTFIRSTGKQHEKDVVDIFNKLYEQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 KG Y G+Y E ++ + ++ DG+ + + V + EEE YFFRLS Y DKL + Sbjct: 121 KGEYKGYYCTPCETFWTESQL---EDGKCPDCGRD-VNYQEEETYFFRLSKYADKLKELF 176 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 + HPEF+ P R+ E+++ F+ GL+DLS++R +FDWG+ +P D ++++YVWIDAL+ YL Sbjct: 177 KDHPEFLEPAFRQKEMLNNFINKGLEDLSVTRTSFDWGVDVPFDNKHVVYVWIDALSCYL 236 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 + GY D+ + + ++WPA +H+IGKDI+RFH I WPA L++ +LPLP+KVF+HG+IL + Sbjct: 237 SAIGYGDDKEKFE-RYWPASVHLIGKDIVRFHTIIWPALLMALDLPLPEKVFAHGWILFE 295 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 +K+SKS GN++ P ++E G DAL+YF++RE G DG + R N+DL N +G Sbjct: 296 NDKMSKSKGNIMYPEPLVELYGNDALKYFMLREFNFGSDGDFSSKKFMDRYNSDLVNDLG 355 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLVSR+ SMI K G+I + D+ ++++ + M + + AL + Sbjct: 356 NLVSRTTSMISKYNGGVIEKGTEEGKFDDELIALAKETYTRFTDLMDSFKFNEALETIWK 415 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L+ ++Y D +PW L + N R + VLY E +R +A L++ + I + L Sbjct: 416 LIRRANKYVDETEPWILGRDEANLPRLNRVLYNLAETLRIVAQLIEPTMKDTTKLILEKL 475 Query: 478 FVADENRCFQS 488 +N+ F+S Sbjct: 476 --GTDNKGFES 484 >gi|255527796|ref|ZP_05394647.1| methionyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|255508509|gb|EET84898.1| methionyl-tRNA synthetase [Clostridium carboxidivorans P7] Length = 594 Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 177/421 (42%), Positives = 272/421 (64%), Gaps = 7/421 (1%) Query: 56 QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD 115 +K+ + A+ GVT K +VD+ +D+ +++++SYD FIRTT+ H + ++KK+ D Sbjct: 5 KKLQRLAEAKGVTPKAYVDEIVAGIKDLWEIMNVSYDKFIRTTDDYHVKAVQDMFKKLYD 64 Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175 +GDIYKG Y GWY E+++ + + DG+ + PV+ +EE YFF++S Y K Sbjct: 65 QGDIYKGSYEGWYCTPCESFWTETQ---AVDGKCPDCGR-PVEKAKEEAYFFKMSKYAPK 120 Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 L+ Y ESHPEFI P R+NE+I+ F+K GL+DL +SR +FDWGI + D ++++YVW+DA Sbjct: 121 LIEYIESHPEFIQPESRKNEMINNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWVDA 180 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L+NY+T GY + K+WPAD+H++GKDILRFH IYWP L++ LPLPK+VF HG Sbjct: 181 LSNYITALGYGSSNSDLYNKYWPADVHLVGKDILRFHTIYWPIMLMALGLPLPKQVFGHG 240 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 ++L G K+SKS GNV+DP+ ++ G D +RY+L+REI G DG ++ + K++N+DL Sbjct: 241 WLLVDGGKMSKSKGNVVDPVLLVNHFGADPVRYYLLREIPFGADGLFNNEIFIKKINSDL 300 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 AN +GNL+SR+ +M+ K + G IP P A D+ ++ V + + + N I AL Sbjct: 301 ANDLGNLLSRTCAMVEKYFGGTIPAPTAKEAIDDELIKVALNTPKAAEQCIDNLRIPEAL 360 Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + L+ ++Y D PW L K + +R TVLY +E +R +++ L AF+P + K Sbjct: 361 DCIWELIGRANKYIDETTPWILAKDESKKERLGTVLYNLLESLRIVSVCLSAFLPDTSEK 420 Query: 473 I 473 I Sbjct: 421 I 421 >gi|205356336|ref|ZP_03223101.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421] gi|205345721|gb|EDZ32359.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421] Length = 628 Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 193/470 (41%), Positives = 295/470 (62%), Gaps = 11/470 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PH+GHAY IIAD LARF+RL G + F TGTDEHGQKI +AA+ Sbjct: 3 YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + + D+ S F+ + D +I+YD + RTT+ RH + + ++ K+ KGDIYK Y G Sbjct: 63 TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E+++ ++ Q + ++EE YFF+LS YQDK+L +YE + I Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQ---TRILKEESYFFKLSKYQDKILQWYE-EKDPI 178 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244 LP ++NE+I+FV++GLKDLS++R +FDWGIK+P +D ++I+YVW+DAL Y+++ + Sbjct: 179 LPKNKKNELINFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYVSSLDF 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + G AKFWPA +H++GKDILRFH IYWPAFL+S +LPLPK + +HG+ +GEK+S Sbjct: 239 QNK--GENAKFWPAHVHLVGKDILRFHTIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+ P EV++ G +A RYFL+RE+ G DG + ++ L R+NA+L+N GNL++R Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + M K G I G + L+ L E ++N +R L ++ +S Sbjct: 357 IIGMSTKYSQGNISKEGVLKFYNAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415 Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + +PW L K N ++A+ ++ + ++ + ++LL +PK + K+ Sbjct: 416 NLAISKYEPWNLIKENKHEQANALIALCANILAKTSLLLSPTLPKSSQKV 465 >gi|121612346|ref|YP_001000523.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] gi|167005457|ref|ZP_02271215.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] gi|87249443|gb|EAQ72403.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] Length = 628 Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 194/470 (41%), Positives = 294/470 (62%), Gaps = 11/470 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PH+GHAY IIAD LARF+RL G + F TGTDEHGQKI +AA+ Sbjct: 3 YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + + D+ S F+ + D +I+YD + RTT+ RH + + ++ K+ KGDIYK Y G Sbjct: 63 TPQEYADKISFEFKKLWDDFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E+++ ++ Q + ++EE YFF+LS YQDK+L +YE + I Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQ---TRILKEESYFFKLSKYQDKILQWYE-EKDPI 178 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244 LP ++NE+I+FV+SGLKDLS++R +FDWGIK+P +D ++I+YVW+DAL Y+++ + Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYISSLDF 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 G AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLP+ + +HG+ +GEK+S Sbjct: 239 --QSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPEFIGAHGWWTKEGEKMS 296 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+ P EV++ G +A RYFL+RE+ G DG + ++ L R+NA+L+N GNL++R Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + M K G I G + L+ L E ++N +R L ++ +S Sbjct: 357 IIGMSTKYSQGNISKEGVLKFYNVE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415 Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + +PW L K N ++A+ ++ + ++ + ++LL +PK K+ Sbjct: 416 NLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPTLPKSCQKV 465 >gi|206603843|gb|EDZ40323.1| Methionyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG'] Length = 673 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 199/479 (41%), Positives = 288/479 (60%), Gaps = 17/479 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 LY++T I Y N PHIGHAY + DVLAR R+ G V F TGTDEHGQK+ ++AQ A Sbjct: 12 LYLTTPIYYVNDIPHIGHAYTTVACDVLARTGRMSGRPVFFLTGTDEHGQKVWQSAQKAN 71 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 ++ +++VD+ FRD+ L IS DDF+RTT+ RH + + ++ G+IY+G Y G Sbjct: 72 LSPQIYVDRIMPRFRDLWKTLLISNDDFVRTTQPRHIRGVQSVLDRLWKNGEIYEGLYEG 131 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WY L DE ++ + +V +G PV+ + E YFFR+S +QD L+S+Y HPE Sbjct: 132 WYCLYDERFWTEKDVTEGLCPDC----RRPVEQVRETNYFFRMSRHQDWLVSWYREHPEA 187 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P R NE++ F++ L+DL +SR WGI +P D +Y+ YVW DAL NY++ Sbjct: 188 IRPESRYNEIMGFLEKPLEDLCISRPVSRLPWGIPLPFDNRYVTYVWFDALLNYVSVP-- 245 Query: 245 LDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 L PDG A + WPA HV+GKDIL HA+YWP L + L P+ +F+HG+ GEK Sbjct: 246 LSGPDGEAALKRLWPAT-HVVGKDILTTHAVYWPTLLHAMGLEPPRLIFAHGWWTVNGEK 304 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GN +DPI+ + G D LRYFL+RE G+D + L R+NADLAN +GNL+ Sbjct: 305 MSKSRGNAVDPIQYAGKYGPDTLRYFLLREGQFGQDADFSDKALIGRINADLANDLGNLL 364 Query: 363 SRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 SR V+M ++ DG P T S E + + R+L ++ + N H+ALA + S V Sbjct: 365 SRVVAMAIRASKDGQFTRPTGHTLSPE-LAAEAERLLTDVPKFTLNFEFHKALASLWSFV 423 Query: 422 SEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 S ++R+ D++ PW L + +P + TVL +E +R + + L ++P+ + IF L Sbjct: 424 SVLNRHVDSRAPWVLAR-DPQKQGELETVLSDLLEGLRLVGVYLAPYMPETSAAIFTAL 481 >gi|221054251|ref|XP_002261873.1| methionine--trna ligase [Plasmodium knowlesi strain H] gi|193808333|emb|CAQ39036.1| methionine--trna ligase, putative [Plasmodium knowlesi strain H] Length = 885 Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 182/477 (38%), Positives = 286/477 (59%), Gaps = 11/477 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++EK YI+TAI Y N PHIGHAYE+++AD +AR+H+ G V FTTG DEHG KIA A Sbjct: 218 KKEKFYITTAINYVNGDPHIGHAYEIVLADAIARYHKNIGRRVFFTTGADEHGMKIANQA 277 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 +T + DQN F+++ +L + D ++RTT +H + +W K DIY G Sbjct: 278 ARNNLTPQELCDQNVLKFKELNKLLHVDEDYYVRTTCDKHKKIAQEIWTKCEQNEDIYLG 337 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y GWY++R+E Y ++E Y + +N ++ M+E YFF++S YQ++L++Y Sbjct: 338 EYEGWYNVREETYVPENE---AKLMNYRDPLNNIKLEKMKESSYFFKMSKYQERLINYIH 394 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +P FI P ++RNE++ +K L DLS SR F WGI +P D +++MYVW+DAL NY ++ Sbjct: 395 ENPHFIQPEQKRNEILQRLKEPLADLSCSRTKFSWGIPVPSDNKHVMYVWMDALINYYSS 454 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KG 300 +D K +WPAD+H+IGKDI+ FH + +P+ L+S N+ LPK VF HGF+L G Sbjct: 455 CFIMD----GKEDYWPADVHLIGKDIVWFHTVIFPSILMSVNVDLPKSVFCHGFVLAGDG 510 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKSLGNVI+P E+IE G DA R+ +++E G D +D D L N+DLA+ IGN Sbjct: 511 KKMSKSLGNVINPFEIIETYGSDAFRFHVIKETKRGFDMRFDIDNLVDMCNSDLADTIGN 570 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 LV R++S+ + IP F E + + + + +M+ + + +++ Sbjct: 571 LVQRTLSLCQLSNESKIPP--LFEEYNIDLPFSLLHFINSVEFHMKTYCVQVCCEKTVNV 628 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +++++ PW+ K ++ ++ + +E I +A L F+P +A++IF L Sbjct: 629 CKDLNKFLTELAPWKYKNEEQNKKLHIIRIMMEAIYLIAHYLDIFIPSIASQIFKKL 685 >gi|116747604|ref|YP_844291.1| methionyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] gi|116696668|gb|ABK15856.1| methionyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] Length = 636 Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 201/517 (38%), Positives = 304/517 (58%), Gaps = 24/517 (4%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + YI+T I Y NA+PHIGHAY I+ADV+ RFH+L G F TGTDEHG KI +AA +A Sbjct: 3 RFYITTPIYYVNAEPHIGHAYTTIVADVMNRFHKLMGFGTFFLTGTDEHGDKIVQAAADA 62 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G K + D+ S F++ L+IS D FIRTT+ H + + +++ D GDI Y Sbjct: 63 GTAPKEYADRISGMFKEAWSKLNISNDHFIRTTDPEHIRVVQHILQQVYDSGDITFSTYR 122 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y + E +Y + E+ DG+ + P++ EE YFFR+S YQ+ L+ + ES+P+ Sbjct: 123 GLYCVGCERFYTEREL---VDGKCPDHDKEPIE-REEANYFFRMSKYQNWLIEHIESNPD 178 Query: 186 FILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 FI P RNEV++F++ L+DL +SR + WGI +P D +Y+ YVW DAL NY++ G Sbjct: 179 FIRPERYRNEVLAFLREPLEDLCISRPKERLAWGITLPFDERYVTYVWFDALINYVSALG 238 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 Y D P +FWP H I KDIL+ H IYWP + +A P+ + + HG+ K+ Sbjct: 239 YPDGP--LFGEFWPVVQHTIAKDILKPHGIYWPTIIKAAGFPVYRHLNVHGYWKINEGKM 296 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS G V+ P+++I G+DA RYFL+RE+ G D + +D L +R+N+DLAN +GNL S Sbjct: 297 SKSRGTVVRPLDMIPLYGLDAFRYFLLREMVFGLDANFSEDALVQRLNSDLANDLGNLFS 356 Query: 364 RSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R+++M LK +DG +P G+ + D ++S R + E RE + H+AL + ++ Sbjct: 357 RTLAMTLKYFDGKVPPFGSEPDDMDRDLISRVERTVAEFREELPVFCFHKALMSIWECLN 416 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++Y D PW L K + R TV+ + +E+ + +A+L+ F+P + K+ + L V Sbjct: 417 AANKYIDTVGPWGLAKDPSRHGRLETVIRILLELNKTMAVLISPFMPSTSEKMLERLGVV 476 Query: 481 DENRCFQSLDQRL----KPGFMLHKT----FDPIFPR 509 +S+D RL + G ++ T D +FPR Sbjct: 477 K-----RSIDLRLAEDGRWGTLVEGTPVSKGDALFPR 508 >gi|57237679|ref|YP_178927.1| methionyl-tRNA synthetase [Campylobacter jejuni RM1221] gi|57166483|gb|AAW35262.1| methionyl-tRNA synthetase [Campylobacter jejuni RM1221] gi|315058288|gb|ADT72617.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3] Length = 628 Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 193/470 (41%), Positives = 293/470 (62%), Gaps = 11/470 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PH+GHAY IIAD LARF+RL G + F TGTDEHGQKI +AA+ Sbjct: 3 YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + + D+ S F+ + D +I+YD + RTT+ RH + + ++ K+ KGDIYK Y G Sbjct: 63 TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E+++ ++ Q + ++EE YFF+LS YQDK+L +YE + I Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQ---TRILKEESYFFKLSKYQDKILQWYE-EKDPI 178 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244 LP ++NE+I+FV++GLKDLS++R +FDWGIK+P +D ++I+YVW+DAL Y+++ + Sbjct: 179 LPKNKKNELINFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIVYVWLDALFIYVSSLDF 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 G KFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+ +GEK+S Sbjct: 239 --QSKGENTKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+ P EV++ G +A RYFL+RE+ G DG + ++ L R+NA+L+N GNL++R Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + M K G I G + L+ L E ++N +R L ++ +S Sbjct: 357 IIGMSTKYSQGNISKEGVLKFYNAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415 Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + +PW L K N ++A+ ++ + ++ + ++LL +PK K+ Sbjct: 416 NLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPTLPKSCQKV 465 >gi|32266841|ref|NP_860873.1| methionyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449] gi|32262893|gb|AAP77939.1| methionyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449] Length = 643 Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 198/519 (38%), Positives = 314/519 (60%), Gaps = 26/519 (5%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ I++ I Y N PHIGHAY I+ D+L +F++L G DV F TGTDEHGQKI ++AQ Sbjct: 3 QKILITSPIYYVNDIPHIGHAYTTILCDMLKKFYQLQGNDVKFLTGTDEHGQKIEQSAQK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + + + D+ S F+++ + +I YD F+RTT+ H + + ++ + KGDIYKG Y Sbjct: 63 HSLDPQSYADKISIRFKELWNEFNIDYDIFVRTTDNMHCLSVQKAFEIMYAKGDIYKGSY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN---PVQWMEEEGYFFRLSAYQDKLLSYYE 181 G Y + E ++ ++ + NA + P Q ++EE YFF LS YQ+KLL +Y+ Sbjct: 123 EGHYCISCETFFTQKQLNEN------NACPDCGKPTQIVQEESYFFALSKYQNKLLDWYK 176 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------DDPQYIMYVWIDAL 235 SHP+FILP R+NE+I FV GL DLS++R +F+WG+ +P DD +++MYVW+DAL Sbjct: 177 SHPDFILPQFRQNEIIKFVNEGLNDLSITRTSFEWGVPLPHNPVRKDDKKHVMYVWLDAL 236 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 +YL+ GYL D +K +W +H +GKDILRFHA+YW AFL+S LPLP+ +++HG+ Sbjct: 237 LSYLSPLGYLS--DSAKMPYWENAIHFVGKDILRFHAVYWLAFLMSLELPLPQHIYAHGW 294 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 G K+SKS+GNVI+P EV G+++LRYFL+RE+ G+DG + + +R+NA+L Sbjct: 295 WTKDGTKMSKSIGNVINPKEVANAYGIESLRYFLLREMPFGQDGDFSQKAFIERINAELG 354 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQNQLIHRA 413 N +GNL++R + M K + + + F + L+ ++ + +E M + HR Sbjct: 355 NDVGNLLNRLIGMSEKYFALQVDSVQVEMFFAPE---LNELKNIIAQAQEKMLSMQPHRY 411 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + ++ + +PW L K++ D+A +L + ++ Q ++LL +P+ A K Sbjct: 412 VEELWKAFGLGNSVITKYEPWNLIKSHQTDKAMALLGLIANILAQSSLLLYPIMPQSACK 471 Query: 473 IFDILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPR 509 I + L + ++ L +L F L+K P+FPR Sbjct: 472 IANTLNFDINAQNYEKLIKQGQLLASFKLNK-IPPLFPR 509 >gi|57167838|ref|ZP_00366978.1| methionyl-tRNA synthetase [Campylobacter coli RM2228] gi|57020960|gb|EAL57624.1| methionyl-tRNA synthetase [Campylobacter coli RM2228] Length = 628 Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 196/475 (41%), Positives = 290/475 (61%), Gaps = 21/475 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I Y N PH+GHAY IIAD LARF+RL G + TGTDEHGQKI +AA+ Sbjct: 3 YLTTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRLLTGTDEHGQKIEQAAKIRNS 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K + D+ S F+ + D +I+YD + RTT+ RH + + ++ K+ KGDIYK Y G Sbjct: 63 TPKEYADKISSEFKKLWDEFEITYDIYARTTDTRHVEFVKAMFLKMWQKGDIYKDEYEGH 122 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYES 182 Y + E+++ A Q N P ++EE YFF+LS YQDK+L +Y+ Sbjct: 123 YCISCESFF--------AKSQLINECGCPDCGKDTSLLKEESYFFKLSKYQDKILQWYDK 174 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYL 239 + ILP ++NE+I+FV+SGLKDLS++R +FDWGI+IP+ D ++I+YVW+DAL Y+ Sbjct: 175 E-DPILPKNKKNELINFVQSGLKDLSITRTSFDWGIEIPEEIKDDKHIIYVWLDALFIYI 233 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 ++ Y G AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+ + Sbjct: 234 SSLDY--QSQGENAKFWPAHIHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKE 291 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 GEK+SKS GNV+ P EV++ G++A RYFL+RE+ G DG + + L R+N +L N G Sbjct: 292 GEKMSKSKGNVVKPKEVVDAYGLEAFRYFLLREVPFGNDGDFSESVLINRINTELGNEFG 351 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL++R + M +K G I G E ++ L L ++N +R L ++ Sbjct: 352 NLLNRIIGMSIKYNQGNISQEGVL-EFYKNELDTAKEHLNNAINFLENLQCNRYLEELFK 410 Query: 420 LVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +S + +PW L K N A+ ++ + ++ + ++LL +PK K+ Sbjct: 411 ALSVANLAISKYEPWNLIKANKIKEANALIGLCANILAKTSLLLSPTLPKSCQKV 465 >gi|281356569|ref|ZP_06243060.1| methionyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548] gi|281316696|gb|EFB00719.1| methionyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548] Length = 646 Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 184/466 (39%), Positives = 278/466 (59%), Gaps = 9/466 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + Y++T I Y N +PHIGHAY I+ADVLAR++R +D F TGTDEHGQK+ KAA Sbjct: 4 DNFYVTTPIYYVNDKPHIGHAYTTILADVLARYYRSLNVDTFFLTGTDEHGQKVEKAAAK 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ K D+ F+++ L I+ D FIRTT++ H + R + +++ D+ +IYK Y Sbjct: 64 RGVSPKQQADETVVRFQELWKRLGITNDRFIRTTDEYHKEVVREILQELYDRDEIYKAEY 123 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 +GWY + E +Y + ++ +G + V + E YFFR+S YQ L+ Y ++HP Sbjct: 124 TGWYCVGCERFYTEKDLVEGKCPEC----GREVSAIRESNYFFRMSKYQQWLIDYIQTHP 179 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 +FI P R NE + F+K L DL +SR WGI++P D Y+ YVW DAL NY++ Sbjct: 180 DFIQPAFRANETLGFLKRELGDLCISRPKSRLSWGIELPFDADYVCYVWFDALINYISAV 239 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY N K+WPA H+IGKDIL H++YWP L + LP+P+ +F+HG+ L K Sbjct: 240 GYRRN-QAEFEKWWPASYHLIGKDILTTHSVYWPTMLKAIGLPMPRTIFAHGWWLTGNTK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKSLGNV++P+++IE+ GVDA RYFL+ E++ G D + ++ R N+DLAN +GNL+ Sbjct: 299 MSKSLGNVVNPMDMIEKCGVDAFRYFLLSEMSPGNDANFSEESFVARYNSDLANDLGNLL 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR + M L+ G+I P D + + + +++ + L V++ V Sbjct: 359 SRVLKMTLRS-GGVIQPPAELNADDLELNREVETAIAAMETSLKAMKFDQGLNAVMNAVR 417 Query: 423 EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 +RY + PW L KK R +TVLY + +R++++LL +P Sbjct: 418 AGNRYLEKTAPWALAKKGEVARLNTVLYTAADALRRISVLLAPVMP 463 >gi|295672620|ref|XP_002796856.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] gi|226282228|gb|EEH37794.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] Length = 576 Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 197/493 (39%), Positives = 284/493 (57%), Gaps = 13/493 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKA 61 +++ Y++T I Y NA PHIGH Y MI+ DVL R+ L G D TGTDEHG KI +A Sbjct: 50 DKKPFYVTTPIFYVNAAPHIGHLYTMILGDVLKRWQILLGNTDAKLLTGTDEHGLKIQQA 109 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A AG+ + DQN + F+++A +++ D FIRTT+ +H D R W ++ +G IY Sbjct: 110 AAVAGMAPQELCDQNCQTFKNLARTVNVENDHFIRTTDPQHKDAVRHFWDMLNHRGYIYT 169 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD---GQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175 + GWYS+ DEA+Y V D G+ A VQW EE Y FRLSA+++ Sbjct: 170 AKHEGWYSVSDEAFYPPSAVQPILDPSTGRKIIASIETGKEVQWTSEENYHFRLSAFKEP 229 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233 LL YY++HP FI P +++++ V SGL+DLS+SR +WGI +P D ++YVW+D Sbjct: 230 LLEYYKNHPNFITPKRYMDDMVNAVSSGLQDLSISRPASRLNWGIPVPSDESQVIYVWLD 289 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T GY PD WPAD+ V+GKDILRFH IYWPAFL++ LPLP+++ +H Sbjct: 290 ALINYITYAGYPFPPDAKS--IWPADVQVVGKDILRFHCIYWPAFLMALGLPLPRQIMAH 347 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 EK+SKS GNV++P IE GVD +R+FLV + A D YD + +R Sbjct: 348 AHWTINNEKMSKSTGNVVNPYFAIERFGVDTVRFFLVIDGAQVSDSGYDNSYIVERYKKG 407 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 L G+GNL SR + + G + ++ R+ M+ RA Sbjct: 408 LQWGLGNLASRVLRGKKWSVRSSVVMAGEGRFQRTEHQDFLESIPEKARDEMRQLDPRRA 467 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 L ++ ++ + ++YF KPW L +N + ++V+Y T E +R ILLQ F+P+ ++K+ Sbjct: 468 LNSIMEIIIQTNKYFHQMKPWTLVMSNLVQLNSVIYSTAESLRIAGILLQPFMPQKSSKL 527 Query: 474 FDILFV--ADENR 484 D+L V A E R Sbjct: 528 LDMLGVERAAEKR 540 >gi|303276647|ref|XP_003057617.1| methionyl-tRNA synthetase [Micromonas pusilla CCMP1545] gi|226460274|gb|EEH57568.1| methionyl-tRNA synthetase [Micromonas pusilla CCMP1545] Length = 632 Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 194/497 (39%), Positives = 281/497 (56%), Gaps = 16/497 (3%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K I+TAI Y N PH+GHAYE I D +AR+HR G DVL+ TG+DEHGQKIA+AA+ A Sbjct: 7 KFCITTAINYANGAPHMGHAYEAISTDCIARYHRAYGRDVLYQTGSDEHGQKIAEAAETA 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G D+ F+D+ ++ D + RTT HH+ C L+++ D GDIY Y Sbjct: 67 GCEPIELCDKYVAAFQDLNAKTSVANDVYNRTTSPEHHEACGELFRRSRDNGDIYLDTYE 126 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY++R+E + + + A Y + P++ M EE YFFR+S YQ +L+ Y E +P Sbjct: 127 GWYNVREEMFVTETD---AAAADYKDPVSGKPLKKMSEESYFFRMSKYQSRLIEYIEENP 183 Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 EFI P RRNE+++ ++ L+DLS+SR TFDWGI +PD P +++YVW DALTNYLT G Sbjct: 184 EFIQPTRRRNEILARLREDELRDLSVSRTTFDWGIPVPDTPGHVLYVWFDALTNYLTGVG 243 Query: 244 YLDN--PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-G 300 + DG FWP + +IGKDI FH + WP L SA +PLPK VF HGF+ G Sbjct: 244 WPKKEVTDGGN-PFWPPAVQIIGKDITWFHCVIWPCMLFSAKIPLPKTVFGHGFVTASDG 302 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKS+GNV+DP+E + + D+ RY+L+R G D + + L NADLA+ +GN Sbjct: 303 QKMSKSIGNVVDPLEQLAKYPSDSFRYYLMRNGVYGSDIPFSEANLVYVHNADLADVLGN 362 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 LV R+ ++ K+ G++P D L S M+N + I+ Sbjct: 363 LVHRATNLCAKNCAGVVPDVAPERVFDVGALRATS------EHAMKNLETQKCCELAINA 416 Query: 421 VSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + + ++Y PW +K +R + ++ T+E + A L F+P + IF+ L Sbjct: 417 MKDTNKYLTDAAPWAVKGDGAAERKAVIIRSTLEAVYAAAHFLSPFIPAACDHIFEKLGA 476 Query: 480 ADENRCFQSLDQRLKPG 496 + S + L PG Sbjct: 477 PAKPIWRLSRESNLTPG 493 >gi|305432137|ref|ZP_07401303.1| methionine--tRNA ligase [Campylobacter coli JV20] gi|304444802|gb|EFM37449.1| methionine--tRNA ligase [Campylobacter coli JV20] Length = 628 Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 196/475 (41%), Positives = 290/475 (61%), Gaps = 21/475 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I Y N PH+GHAY IIAD LARF+RL G + TGTDEHGQKI +AA+ Sbjct: 3 YLTTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRLLTGTDEHGQKIEQAAKIRNS 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K + D+ S F+ + D +I+YD + RTT+ RH + + ++ K+ KGDIYK Y G Sbjct: 63 TPKEYADKISSEFKKLWDEFEITYDIYARTTDTRHVEFVKAMFLKMWQKGDIYKDEYEGH 122 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYES 182 Y + E+++ A Q N P ++EE YFF+LS YQDK+L +Y+ Sbjct: 123 YCISCESFF--------AKSQLINECGCPDCGKDTSLLKEESYFFKLSKYQDKILQWYDK 174 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYL 239 + ILP ++NE+I+FV+SGLKDLS++R +FDWGI+IP+ D ++I+YVW+DAL Y+ Sbjct: 175 E-DPILPKNKKNELINFVQSGLKDLSITRTSFDWGIEIPEEIKDDKHIIYVWLDALFIYI 233 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 ++ Y G AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+ + Sbjct: 234 SSLDY--QSQGENAKFWPAHIHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKE 291 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 GEK+SKS GNV+ P EV++ G++A RYFL+RE+ G DG + + L R+N +L N G Sbjct: 292 GEKMSKSKGNVVKPKEVVDAYGLEAFRYFLLREVPFGNDGDFSESVLINRINTELGNEFG 351 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL++R + M +K G I G E ++ L L ++N +R L ++ Sbjct: 352 NLLNRIIGMSIKYNQGNISQEGVL-EFYKNELDTAKEHLDNAINFLENLQCNRYLEELFK 410 Query: 420 LVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +S + +PW L K N A+ ++ + ++ + ++LL +PK K+ Sbjct: 411 ALSVANLAISKYEPWNLIKANKIKEANALIGLCANILAKTSLLLSPTLPKSCQKV 465 >gi|220904688|ref|YP_002480000.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868987|gb|ACL49322.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 670 Score = 366 bits (939), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 190/476 (39%), Positives = 288/476 (60%), Gaps = 13/476 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 +I+T I Y NA+PH+GHAY ++AD +AR+H+L G D LF TGTDEHG KI +AA+ G Sbjct: 4 FFITTPIYYVNARPHLGHAYTTVVADAMARYHKLAGQDTLFLTGTDEHGDKIVQAAEKEG 63 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + K FVD S F+ + LD++ D F+RTT+ H + + +K+ D GDIY G + G Sbjct: 64 KSPKEFVDGISARFQALWPRLDVANDRFVRTTDPAHVASVQSFLQKVYDAGDIYFGEFGG 123 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y E +Y + E+ G Q+ + +++ E+ YFFR+S Y L + E +P F Sbjct: 124 HYCYGCERFYTEKELENGLCPQHLSKP----EFISEKNYFFRMSKYLPWLKEHIEQNPTF 179 Query: 187 ILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 I P R EV+S ++SG L+DL +SR WGI++P D Y+ YVW DAL NY++ G Sbjct: 180 IRPERYRTEVLSMLESGALEDLCISRPKSRLTWGIELPFDKDYVCYVWFDALINYISALG 239 Query: 244 YLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 + PDG+ ++WP + H++ KDIL+ HA++WP L SA LP + + HG+ L + K Sbjct: 240 W---PDGADFERYWPGE-HLVAKDILKPHAVFWPTMLKSAGLPQYRHLNVHGYWLVRDTK 295 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKSLGNV++P E+ + G DA RYFL+RE+ G D + + L R+NADLAN +GNL Sbjct: 296 MSKSLGNVVEPEEMAQRFGADAFRYFLLREMHFGSDASFSDEALVGRINADLANDLGNLF 355 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR +SM K + +P P F E+D++I +C+ ++ + N + L + LV Sbjct: 356 SRVLSMTAKYFGSRVPAPKQFDEADKAIEDLCATAMRNFSQLFGNVQFAQGLESLWELVR 415 Query: 423 EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +++Y D+Q PW L K+ N +R +TV+YV + +R+ A+ L +P K+ + L Sbjct: 416 ALNKYVDSQAPWALHKQGNMERLATVMYVLLAAMRKTALCLWPVMPVACGKMLEQL 471 >gi|94263063|ref|ZP_01286882.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1] gi|93456606|gb|EAT06714.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1] Length = 507 Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 194/472 (41%), Positives = 281/472 (59%), Gaps = 12/472 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 LY++T I Y NAQPH+GHAY ++AD +ARF RLDG +V F TGTDEHG KI AA+ A Sbjct: 3 LYLTTPIFYVNAQPHLGHAYTGVVADTVARFARLDGEEVFFQTGTDEHGDKIVGAAKEAE 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 V + +VD+ S FR +L++ D+FIRTT+ H + + + +++ +GDIY Y+G Sbjct: 63 VDLREYVDRISALFRQAWPLLEVEPDNFIRTTDPAHIEVVQHILQQVYQRGDIYFSDYAG 122 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y E + + E+ DG+ + Q P + + E+ YFF++S YQ L+ + + HPEF Sbjct: 123 LYCRGCERFLTEKEL---VDGKCPDHQVAPAE-IREQNYFFKMSRYQQWLIDHIKEHPEF 178 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P RNEV+SF+ L DL +SR +WGI +P D ++ YVW DAL NY++ GY Sbjct: 179 ITPERYRNEVLSFLSEPLDDLCISRPVSRLEWGIPLPFDRNFVTYVWFDALINYISGIGY 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D PD A W A H+I KDIL+ HAI+WP L + LP +++ HG+ K+S Sbjct: 239 PDAPD--FAPRWAAAEHLIAKDILKPHAIFWPTMLRAMGLPPYRRLHVHGYWNVNEAKMS 296 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS+GNV+ P +++E+ G D +RYFL+RE++ G D Y + + R NADLAN +GNL SR Sbjct: 297 KSIGNVVRPQDMVEQFGADTVRYFLLREMSFGLDASYSDEAVLARRNADLANDLGNLFSR 356 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 S++M+ D +PTPG TE D+ + C +L M+ +AL V ++ Sbjct: 357 SLTMVKNFADSRVPTPGTLTEEDQELADACLAMLDSYGRQMREFAFRQALEAVWEVIGRA 416 Query: 425 DRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +RY PWEL K +PD R +TVL +E +R +A L +P A K+ Sbjct: 417 NRYIVTNAPWELAK-DPDQQERLATVLNTLLETLRCIATTLGPVMPGAATKM 467 >gi|296126295|ref|YP_003633547.1| methionyl-tRNA synthetase [Brachyspira murdochii DSM 12563] gi|296018111|gb|ADG71348.1| methionyl-tRNA synthetase [Brachyspira murdochii DSM 12563] Length = 651 Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 203/516 (39%), Positives = 313/516 (60%), Gaps = 12/516 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I YP+ HIGH Y I AD +AR+ ++ G DV F TGTDEHG+KIA+ A+ Sbjct: 4 KKFYITTPIYYPSDYLHIGHCYCTIAADTMARYKKIMGYDVYFLTGTDEHGEKIARKAEA 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 A T K +VD +++ L I Y +IRTT+ H + ++K + DKG IYKG Y Sbjct: 64 ADTTPKAYVDNIVNATKELWKRLHIDYSHYIRTTDDYHERRVQKIFKILYDKGYIYKGAY 123 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 G Y + DEA++ + +V K DG++Y +++ EEE Y+ +LS Y L+ YY+ H Sbjct: 124 KGLYCVSDEAFFTESQVVKKDDGKFYCPDCEKELEYKEEECYYLKLSEYGQWLIDYYKDH 183 Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEF+ P ER+NE++ +F+ GL+DL+++RK WGI P D ++ +YVWIDAL+NY+T Sbjct: 184 PEFLEPKERQNEMLKNFLLPGLEDLAVTRKGLQWGIPCPVDSEHSIYVWIDALSNYITAL 243 Query: 243 GY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KG 300 GY D D K+W D+H +GK+I+RFHA+ WP L ++PLPKKVF HG++L G Sbjct: 244 GYPEDGEDDLYKKYWSCDVHFVGKEIVRFHAVIWPIMLKMLDIPLPKKVFGHGWVLFDDG 303 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKS GNV+DP +I++ GVDALRYFL+REI G DG+Y ++ KR+N+DLAN GN Sbjct: 304 KKMSKSRGNVVDPNTLIDKYGVDALRYFLMREINFGSDGYYSQELFLKRINSDLANDYGN 363 Query: 361 LVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 L R +M+ K ++G++P F + ++ + + + + + + H AL+ + Sbjct: 364 LWHRITTMLGKYFNGVLPDEAESVFGDREKELKKMVLTLDANVESALDSFKFHEALSYIW 423 Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 ++ ++Y + PW L K D + V+Y++ +V + LQ F + K+F+ Sbjct: 424 EVIRMTNKYVEESAPWNLAKDEAKKDHLANVMYISFQVYYIVTAYLQIFFVETPKKVFNR 483 Query: 477 LFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 L + D + +S + LK G + K +P+F R+ Sbjct: 484 LGLGD-SVSLESAKKWGSLKAGTKIEKG-EPLFNRY 517 >gi|310794257|gb|EFQ29718.1| tRNA synthetase class I [Glomerella graminicola M1.001] Length = 545 Score = 365 bits (938), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 189/500 (37%), Positives = 288/500 (57%), Gaps = 20/500 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I Y NA PHIGH Y MI+ADVL R+ L G + TGTDEHG K+ +AA GV Sbjct: 12 YVTTPIFYVNASPHIGHMYSMILADVLKRWQVLKGRPAILCTGTDEHGSKVQQAAARQGV 71 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 K F D + FRD+A + + D FIRTT+ H + + W + KG IY+ + GW Sbjct: 72 EPKDFCDTTAEKFRDLARAIGMDNDHFIRTTDPDHKEAVQHFWHLLKGKGYIYEAKHQGW 131 Query: 128 YSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y + DE +Y DE+ + G N V+W+EE+ Y FR++A +D+LL +Y Sbjct: 132 YCISDECFYAADEIERKVVPRTGRTAMVSIESGNEVEWIEEKTYHFRMTALKDRLLEFYT 191 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYL 239 ++P++I+P R NEVI++V + L+DLS+SR + DWG+++PDDP +YVW+DAL NYL Sbjct: 192 ANPDWIVPRARMNEVIAWVSNNLEDLSISRPVQRLDWGVRVPDDPSQTVYVWVDALINYL 251 Query: 240 TTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 T G+ P WPAD+HVIGKDI+RFH +YWPA L++ +LPLPK++ +H Sbjct: 252 TKAGFPGWQPGREHEGGWPADVHVIGKDIVRFHGVYWPALLMALDLPLPKQLLTHAHWTL 311 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 +K+SKSLGNV++P I+ G+D +RYF++R+ KD Y+ + +R DL + + Sbjct: 312 GRKKMSKSLGNVVNPFFAIDRWGLDTMRYFMMRDGGIEKDADYENSFILERYQKDLQSTL 371 Query: 359 G---NLVSRSVSMILKDYDGMIPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIH 411 G N V++S L++ + G F +++ + + + + E+M + Sbjct: 372 GNSMNRVAKSKVWKLRNSVAWVGQNGIFRGHAVNGSDALKASVNEMAATMSEHMDQLNPN 431 Query: 412 RALAQVISLVSEVDRYFDAQKPWEL----KKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 A+ V+S+++EV++Y PW L K T+ ++Y E +R ILLQ +P Sbjct: 432 AAIRSVLSVLAEVNKYLTDTGPWNLYRSTKATDQAELHEIIYHASEAVRCAGILLQPVMP 491 Query: 468 KLANKIFDILFVADENRCFQ 487 + DIL V + R F+ Sbjct: 492 AKMGTMLDILGVQVDKRGFE 511 >gi|308802976|ref|XP_003078801.1| methionyl-tRNA synthetase of possible bacterial origi (ISS) [Ostreococcus tauri] gi|116057254|emb|CAL51681.1| methionyl-tRNA synthetase of possible bacterial origi (ISS) [Ostreococcus tauri] Length = 700 Score = 365 bits (938), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 200/475 (42%), Positives = 283/475 (59%), Gaps = 13/475 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E ++TAI Y N PH+GHAYE + DVLAR+HR G VLF TG+DEHGQKIA+AA+ Sbjct: 25 ETFSVTTAINYANGAPHMGHAYESVSTDVLARYHRAYGRKVLFQTGSDEHGQKIAEAAEV 84 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AGV FVD + FR + + L +S D + RTT + H C L+++ D GDIY Y Sbjct: 85 AGVAPLAFVDGHVEEFRKLNERLSVSNDVYNRTTSEAHKKACAELFRRSRDNGDIYLDTY 144 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 GWY++R+E + + E A G ++ M+EE YFF+ S YQ +L+++ ESHP Sbjct: 145 EGWYNVREETFVTESEAQ--ASGYKDPVSGKDLKKMKEESYFFKQSRYQAQLIAHIESHP 202 Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 EFI P RRNE+++ +++ L+DLS+SR TFDWGI +PD P+++MYVW DALTNYLT TG Sbjct: 203 EFIQPSSRRNEILARLQNDELRDLSVSRTTFDWGIPVPDAPKHVMYVWFDALTNYLTGTG 262 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302 + + D K FWPA +H+IGKDI+ FH + WP L SA L LPK VF HGF+ + G+K Sbjct: 263 WPEETD--KKDFWPASVHIIGKDIIWFHCVIWPCMLWSAGLQLPKTVFGHGFVTAEDGQK 320 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNV+DP V+E+ D RY+L+R G D + + + NADLA+ IGNLV Sbjct: 321 MSKSIGNVVDPNVVLEKFSSDTFRYYLMRCGVYGSDIPFSEAAMVSIHNADLADVIGNLV 380 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R ++ K G++P TE +L+V +R M I A I V Sbjct: 381 HRVTNLCNKSCGGVVPD--CATEDIFDVLAVRARS----EAAMAKFNIQAACEAAIEAVK 434 Query: 423 EVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 ++Y PW +K +R + ++ T+E + LQ ++P I+++ Sbjct: 435 ATNKYLTDAAPWAVKGEGAEERKAVIIRSTIEAVYVSMHFLQPYIPTACEAIWEL 489 >gi|283954409|ref|ZP_06371929.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414] gi|283794026|gb|EFC32775.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414] Length = 625 Score = 365 bits (938), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 194/478 (40%), Positives = 300/478 (62%), Gaps = 27/478 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PH+GHAY IIAD LARF+RL G + F TGTDEHGQKI +AA+ Sbjct: 3 YITTPIYYVNDMPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNF 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + + D+ S F+ + D +I+YD + RTT+ RH + + ++ K+ KGDIYK Y G Sbjct: 63 TPQEYADKISSEFKKLWDEFEITYDIYARTTDIRHIEFVKAMFLKMWQKGDIYKDEYEGH 122 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY-ESHPEF 186 Y + E+++ ++ Q + ++EE YFF+LS YQDK+L +Y E P Sbjct: 123 YCVSCESFFTQSQLINEYSCPDCGKQ---TRILKEESYFFKLSKYQDKILQWYQEKDP-- 177 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTG 243 ILP ++NE+++FV++GLKDLS++R +FDWGIK+P +D ++I+YVW+DAL Y+++ Sbjct: 178 ILPKNKKNELVNFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIVYVWLDALFIYVSSLD 237 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 + G AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+ +GEK+ Sbjct: 238 F--QCKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKM 295 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+ P E+++ G +A RYFL+RE+ G DG + ++ L R+NA+L+N GNL++ Sbjct: 296 SKSKGNVVKPKEMVDAYGSEAFRYFLLREVPFGIDGDFSENMLINRINAELSNEFGNLLN 355 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN-------MQNQLIHRALAQ 416 R + M +K G I S E++L + L + +E+ ++N +R L + Sbjct: 356 RIIGMSIKYSQGNI--------SKENVLKFYNAELNQTKEHLNLAVEFLENLQCNRYLEE 407 Query: 417 VISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + +S + +PW L K N ++A+ ++ + ++ + ++LL +PK K+ Sbjct: 408 LFKALSVANLAISKYEPWNLIKENKHEQANALIALCANILAKTSLLLSPALPKSCQKV 465 >gi|206895720|ref|YP_002247393.1| methionyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] gi|206738337|gb|ACI17415.1| methionyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] Length = 638 Score = 365 bits (938), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 201/513 (39%), Positives = 289/513 (56%), Gaps = 28/513 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I Y NA+PH G AY + AD LAR+HRL G F TGTDEHGQ I K A G+ Sbjct: 5 YVTTPIYYVNAEPHAGSAYTTVYADALARYHRLIGDRTFFLTGTDEHGQNILKVANEKGI 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + FVDQ ++ F+D + IS DDFIRTTE RH + + + + +KGDIY G Y GW Sbjct: 65 NPQEFVDQMAQKFKDAWRFMRISNDDFIRTTEPRHEKVVQRVIEIMYEKGDIYLGTYQGW 124 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E YY ++E+ G PV+++ EE YFF+ S YQD LL Y ++P+F+ Sbjct: 125 YCPKCETYYGENELENGN----CPIHKTPVEFVSEESYFFKWSKYQDPLLELYRTNPDFV 180 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 +P R NE+ SFV+ GLKD+S+SR + WGI +P D ++ +YVW DAL NY++ GY D+ Sbjct: 181 VPATRLNEIKSFVERGLKDISVSRTSVPWGIPVPFDTKHTVYVWYDALINYISALGYTDS 240 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307 G K +FWP +H+IGKDILR HA WPA L+S LP+PK+V +HG+ L G+K+SKS+ Sbjct: 241 --GEKMEFWPG-VHLIGKDILRHHAALWPAMLMSLELPVPKRVVAHGWWLVSGQKMSKSV 297 Query: 308 GNVIDPIEVI----------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 GN+ P +++ E++ VDALRYF++ D + L NADLAN Sbjct: 298 GNIFSPQDLVSHIENSVGLTEDIAVDALRYFMLAAGPQRDDADLSLEALWGTYNADLAND 357 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 GNL+ R + + K G+ P + + +V LQ+ + + + AL+ Sbjct: 358 YGNLLHRVLGFMKK--KGIDTAPKVTGQRYSRVAAVVEEQLQKYHAAYEKEDVQGALSSA 415 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + L+ ++ + D +KPW L + D + LY +E R +L +P A ++ L Sbjct: 416 LDLIKFLNDFQDKEKPWTL---SGDDLAEFLYSELEAYRVATTMLSPAMPSAAQRVAATL 472 Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + SL GF T P+FPRF Sbjct: 473 ------QTQLSLTFGKVSGFKPDLTQPPLFPRF 499 >gi|124023178|ref|YP_001017485.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303] gi|123963464|gb|ABM78220.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303] Length = 515 Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 193/513 (37%), Positives = 294/513 (57%), Gaps = 20/513 (3%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+T + Y N +PH+G Y + +D LARF RL+G V+F TG DEHGQKI + A+ ++ Sbjct: 6 ITTPLYYVNDKPHLGSLYTTMASDALARFQRLEGKQVMFVTGVDEHGQKIQRTAEVNNIS 65 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + DQ +R+++++ DIS D FIRTT RH ++++ GD+Y G GWY Sbjct: 66 PQQHCDQITRSYQNLWSRWDISNDRFIRTTSHRHQLLVEAFFQRVETSGDVYLGRQQGWY 125 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E Y ++ A P++W +EE FFRLS +Q ++ S P+FI Sbjct: 126 CVDCEEYKDEP---PQAQSPSCPIHQKPLEWRDEENLFFRLSRFQSQIEDLI-SQPDFIW 181 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P+ RRNE+ +FV GL+D S+SR DWG+ +P P++ YVW DAL YL+ LD Sbjct: 182 PVSRRNEIQNFVAQGLRDFSISRIDVDWGLPVPGYPKHTFYVWFDALVGYLS--ALLD-- 237 Query: 249 DGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 DG + + WPA +H+IGKDILRFHA+YWPA L SA LPLPK+VF HGF+ +G+ Sbjct: 238 DGGQVRIERLVECGWPASVHLIGKDILRFHAVYWPAMLSSAGLPLPKQVFGHGFLTREGQ 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+ KSLGNV+DP ++IE G DA+R++L+R+I G DG + + VN DLAN IGNL Sbjct: 298 KMGKSLGNVLDPEKLIEVCGEDAVRWYLLRDIQFGHDGDFQQKRFMDLVNNDLANTIGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R+ +M K ++G +P+ + +++ + +R++M + H A ++ L Sbjct: 358 LNRTSTMARKWFEGSVPSHRNEIDYAHPLVTTAETTITIVRQSMPSMAFHDAAEAILKLA 417 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + Y + PW KT + A LY +E R + +L+ VP L+ ++ + L + Sbjct: 418 IAANVYLNETAPWSRMKTPGNEAEVADDLYSVLEACRLVGLLINPLVPSLSERLLNQLGL 477 Query: 480 A-DENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 + D N SL +L+ G +L + P+ R Sbjct: 478 SIDSNDWSNSLAWGQLQSGALLPPS-QPVMQRL 509 >gi|299137612|ref|ZP_07030793.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8] gi|298600253|gb|EFI56410.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8] Length = 784 Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 227/576 (39%), Positives = 312/576 (54%), Gaps = 80/576 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+K Y++T I Y NA+PHIGHAY I+ADVLAR HRL G D F TGTDEHGQKI ++A Sbjct: 5 RKKFYLTTPIYYVNARPHIGHAYTTIVADVLARRHRLLGDDTFFLTGTDEHGQKIERSAA 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG+ + F DQ S FR++ D + ++YD +IRTT+ +H + L+ + ++G IY Sbjct: 65 VAGIAPQQFADQVSIQFRNLWDRMGLTYDRYIRTTDAKHKRGAQKLFADLYERGQIYLSS 124 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+G YS+ +E + G DG+ P + + EE +FFRLS YQ LL ES Sbjct: 125 YTGQYSVGEEIFVEGPPGTIGPDGK-------PTETVTEENFFFRLSEYQRPLLDLIESD 177 Query: 184 PEFILPIERRNEVISF------------------------VKSGLKDLSLSRKTFDWGIK 219 I P R+NEV+SF VK L+DLS+SR +F WGI Sbjct: 178 TLAITPEARKNEVLSFLRGNVVEGRAAGLEIENSNTGAPYVKGALRDLSVSRSSFTWGIP 237 Query: 220 IPD------DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRF 270 +P+ D +++MYVW+DAL NY+T GY + A+F WPAD+H++ K+I R Sbjct: 238 VPEPAASATDKKHVMYVWLDALANYMTAIGYGSDDPKDTAEFNHYWPADVHIMAKEITRQ 297 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--------- 321 H IYWPAFLL+ANL LPK V +HG++L K+SKS GN++ +++ G Sbjct: 298 HCIYWPAFLLAANLSLPKAVTAHGWLLFDNSKMSKSKGNIVRTETILDAFGDEVYGKQFP 357 Query: 322 -----------VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 D LRYFL+REI G+DG + D L R NADLANG GNLVSR++SMI Sbjct: 358 DSTKAERDLFASDVLRYFLLREIPFGQDGSFSFDALVTRYNADLANGYGNLVSRTLSMIA 417 Query: 371 KDYDGMIPT-------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 K DG+IP P F +D S + E+ ++ +L+++ SLV+ Sbjct: 418 K-RDGIIPEDKDALFDPN-FMGNDVLPYSSIRATVMEVAADLDRSAFSSSLSKLWSLVTL 475 Query: 424 VDRYFDAQKPWEL----KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 VD Y PW+L K + +AS +LY E IR + +L +P K++ L + Sbjct: 476 VDGYITQYAPWKLVTSDDKVDQYKASFILYSAAESIRIVTAILYPTLPTATAKVWAQLGL 535 Query: 480 AD-----ENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509 D N +L LKPG L PIFPR Sbjct: 536 GDIEVAARNGELNNLQWGGLKPGTKLGP-LAPIFPR 570 >gi|197294265|ref|YP_001798806.1| methionyl-tRNA synthetase [Candidatus Phytoplasma australiense] gi|171853592|emb|CAM11463.1| Methionyl-tRNA synthetase [Candidatus Phytoplasma australiense] Length = 517 Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 204/521 (39%), Positives = 312/521 (59%), Gaps = 28/521 (5%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M+ + K Y+ST+IAY + PHIG+ YE+I+AD +ARF RLDG DV F TGTDEHGQKI + Sbjct: 1 MENKTKFYLSTSIAYASGIPHIGNVYEVILADAIARFKRLDGWDVFFQTGTDEHGQKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A + GV + +V+ S + + D++ ISYD FI+TT +H ++++ K+ +GDIY Sbjct: 61 KASSKGVLPQEYVNYISSEIKRIYDLMQISYDRFIKTTNHKHQKAVQVIFTKLLQQGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 G Y G YS+ +E Y ++ ++ DG+ +N + P+ + E+ YFF+L+ YQ++LL Y Sbjct: 121 LGKYQGLYSVTEEVYVSEKDL---VDGKTFNGEI-PI-LISEDTYFFKLAKYQNRLLDYL 175 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E++P I P ++ E+++ +K L DLS+SR +F WGI +P D +++YVWIDAL+NYLT Sbjct: 176 ENNPNLIQPETQKKEILNLLKEPLNDLSISRTSFRWGIPVPCDKNHVIYVWIDALSNYLT 235 Query: 241 TTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 Y N + S ++WP +LHVIGKDILRFH IYWP L++ + LP+K +H +IL Sbjct: 236 GLDYNPNENTSSKFLQYWPCNLHVIGKDILRFHLIYWPILLMALKIELPQKFLAHPWILF 295 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K+SKS GNV+ ++++ +D +RYF++ EI DG + L +R N+ L N Sbjct: 296 DKNKMSKSKGNVLYVDDLLKFFPIDTIRYFVLHEIPYASDGNITYELLVERHNSVLVNLF 355 Query: 359 GNLVSRSVSMILKDYDG-----MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 GN+V R M LK Y ++ P E D S VL +R+ + + A Sbjct: 356 GNVVHRIFGM-LKSYRNYQLTQILDLPENHQEFDLS--QKVLLVLPLMRQKFEECKVGEA 412 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAST---VLYVTVEVIRQLAILLQAFVPKLA 470 L +V L +++Y D+ KPWEL + P++ + VLY E +R L +LL+ F+P+ A Sbjct: 413 LEEVEKLARLMNKYIDSVKPWELAQL-PEKETLLNYVLYSLTEALRFLGVLLKPFLPQTA 471 Query: 471 NKIFDILFVADENRCFQSLD-------QRLKPGFMLHKTFD 504 KI + + E+ F+SL ++L P ML + D Sbjct: 472 EKI--LCQIQAEDVTFESLKTFGLLKTKKLMPDEMLFQRID 510 >gi|94266428|ref|ZP_01290123.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1] gi|93452970|gb|EAT03469.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1] Length = 507 Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 192/471 (40%), Positives = 279/471 (59%), Gaps = 10/471 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 LY++T I Y NAQPH+GHAY ++AD +ARF RLDG +V F TGTDEHG KI AA+ A Sbjct: 3 LYLTTPIFYVNAQPHLGHAYTGVVADTVARFARLDGEEVFFQTGTDEHGDKIVGAAKEAE 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 V + +VD+ S FR +L++ D+FIRTT+ H + + + +++ +GDIY Y+G Sbjct: 63 VDLREYVDRISALFRQAWPLLEVEPDNFIRTTDPAHIEVVQHILQQVYQRGDIYFSDYAG 122 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y E + + E+ DG+ + Q P + + E+ YFF++S YQ L+ + + HPEF Sbjct: 123 LYCRGCERFLTEKEL---VDGKCPDHQVAPAE-IREQNYFFKMSRYQQWLIDHIKEHPEF 178 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P RNEV+SF+ L DL +SR +WGI +P D ++ YVW DAL NY++ GY Sbjct: 179 ITPERYRNEVLSFLSEPLDDLCISRPVSRLEWGIPLPFDRNFVTYVWFDALINYISGIGY 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D PD A W A H+I KDIL+ HAI+WP L + LP +++ HG+ K+S Sbjct: 239 PDAPD--FAPRWAAAEHLIAKDILKPHAIFWPTMLRAMGLPPYRRLHVHGYWNVNEAKMS 296 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS+GNV+ P +++E+ G D +RYFL+RE++ G D Y + + R NADLAN +GNL SR Sbjct: 297 KSIGNVVRPQDMVEQFGADTVRYFLLREMSFGLDASYSDEAVLARRNADLANDLGNLFSR 356 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 S++M+ D +PTPG TE D+ + C +L M+ +AL V ++ Sbjct: 357 SLTMVKNFADSRVPTPGTLTEEDQELADACLAMLDSYGRQMREFAFRQALEAVWEVIGRA 416 Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +RY PWEL K +R +TVL +E +R +A L +P A K+ Sbjct: 417 NRYIVTNAPWELAKDPGQQERLATVLNTLLETLRCIATTLGPVMPGAATKM 467 >gi|124515022|gb|EAY56533.1| Methionyl-tRNA synthetase [Leptospirillum rubarum] Length = 673 Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 198/479 (41%), Positives = 288/479 (60%), Gaps = 17/479 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 LY++T I Y N PHIGHAY + DVLAR R+ G V F TGTDEHGQK+ ++AQ A Sbjct: 12 LYLTTPIYYVNDIPHIGHAYTTVACDVLARTGRMSGRPVFFLTGTDEHGQKVWQSAQKAN 71 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 ++ +++VD+ FRD+ L IS DDF+RTT+ RH + + ++ G+IY+G Y G Sbjct: 72 LSPQIYVDRIMPRFRDLWKTLLISNDDFVRTTQPRHIRGVQSVLDRLWKNGEIYEGLYEG 131 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WY L DE ++ + +V +G PV+ + E YFFR+S +QD L+S+Y HP+ Sbjct: 132 WYCLYDERFWTEKDVTEG----LCPDCRRPVEQVRETNYFFRMSRHQDWLVSWYREHPDA 187 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P R NE++ F++ L+DL +SR WGI +P D +Y+ YVW DAL NY++ Sbjct: 188 IRPESRYNEIMGFLEKPLEDLCISRPVSRLPWGIPLPFDNRYVTYVWFDALLNYVSVP-- 245 Query: 245 LDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 L PDG A + WPA HV+GKDIL HA+YWP L + L P+ +F+HG+ GEK Sbjct: 246 LSGPDGESALKRLWPAT-HVVGKDILTTHAVYWPTLLHAMGLEPPRLIFAHGWWTVNGEK 304 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GN +DPI+ + G D LRYFL+RE G+D + L R+NADLAN +GNL+ Sbjct: 305 MSKSRGNAVDPIQYAGKYGPDTLRYFLLREGQFGQDADFSDKALIGRINADLANDLGNLL 364 Query: 363 SRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 SR V+M ++ DG P T S E + S R+L ++ + N H+ALA + S V Sbjct: 365 SRVVAMAIRASKDGQFIRPTGHTLSSE-LASEAERLLTDVPKLTLNFEFHKALASLWSFV 423 Query: 422 SEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 S ++R+ D++ PW L + +P++ VL +E +R + + L ++P+ + IF L Sbjct: 424 SVLNRHVDSRAPWVLAR-DPEKQGELEIVLSDLLEGLRLVGVYLAPYMPETSVAIFTAL 481 >gi|253743531|gb|EES99896.1| Methionyl-tRNA synthetase [Giardia intestinalis ATCC 50581] Length = 593 Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 197/558 (35%), Positives = 308/558 (55%), Gaps = 53/558 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+Y++T I Y N +PHIGH + ++AD L RF +L G + TGTDEHGQK+ ++A+ Sbjct: 5 KVYLTTPIYYVNGKPHIGHVFTTLLADTLRRFRKLQGFEPYLMTGTDEHGQKVQQSAEKM 64 Query: 66 GVTTKVFVDQNSRNFRD-MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + D ++ F + + D F+RTT H + LWK++ D G IYK Y Sbjct: 65 GLQPQQWCDNMAKTFETYFVESFGLCPDAFMRTTMPEHAEMAIKLWKRLCDAGLIYKDKY 124 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSY 179 GWY + DEA+ + + G D Q + P ++ EE Y F+LS++Q+ LL + Sbjct: 125 EGWYCVADEAFVTETNLKAGVDAQGNPCKISADSGQPCVFLSEENYKFKLSSFQEPLLKF 184 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237 Y +P+ I+P R+ E++SF++SGL D+S+SR WGI +P D ++MYVWIDALT Sbjct: 185 YRDNPDIIIPTFRQAEIVSFIQSGLHDISISRSKDKISWGIPVPGDSDHVMYVWIDALTI 244 Query: 238 YLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 YLT G+ NPDG+ + WPAD+ +GKDI RFH +YW AFL+ A +P P++ F HG+ Sbjct: 245 YLTAAGFTINPDGTFNSGLWPADVQFLGKDIARFHCVYWLAFLMGAGIPCPRRFFIHGWW 304 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 +KI KSLGN +DP+ ++E G+D+++YF++RE + D ++ + RV +DLAN Sbjct: 305 TVNHQKIGKSLGNALDPMSLVEIYGLDSVKYFMLREGSPANDPSITEELISMRVESDLAN 364 Query: 357 GIGNLVSRSVSMIL----------KDYDG--------------------MIPTPGAFTES 386 +GNL R + L K ++G ++PT + E Sbjct: 365 VLGNLTMRCTAESLLPERVWTDPSKLFEGKDFMQIRSCWMSSRMSSIAELLPTDESKREH 424 Query: 387 DESILSV--CSRVL-------QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 S++ + SR+L +E+ + M+N I AL+++ +++ V+ Y PW L Sbjct: 425 ISSVIKMDDVSRLLDKGFTICEEVVKLMENIDIPGALSKIFEILTGVNNYIQLTMPWSLI 484 Query: 438 KTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS---LDQR 492 K ++S V+Y + E++R A LL F+P+ A I D L V E R + Sbjct: 485 KKEGTKSSHEFVMYCSTELLRICATLLLPFIPQKAPLILDQLGVPAECRVIEKDVLTIGY 544 Query: 493 LKPGFMLHKTFDPIFPRF 510 +KPG L + P+FP+ Sbjct: 545 IKPGLALGEKLPPLFPKL 562 >gi|154320610|ref|XP_001559621.1| hypothetical protein BC1G_01777 [Botryotinia fuckeliana B05.10] gi|150853466|gb|EDN28658.1| hypothetical protein BC1G_01777 [Botryotinia fuckeliana B05.10] Length = 579 Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 186/503 (36%), Positives = 290/503 (57%), Gaps = 17/503 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K ++ Y++T I Y NA PH+GH Y M++ADV R+ L G + TGTDEHG KI +A Sbjct: 44 KSKKPFYVTTPIFYVNAAPHVGHLYTMVLADVFKRWQVLKGNTAILCTGTDEHGMKIQRA 103 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A AG K F D + F+++A +S D F+RTT+ H +T +W + ++ IY+ Sbjct: 104 AAQAGALPKEFCDIGAETFKELAKRAGLSNDHFVRTTDPDHKETVEYIWYMLREREYIYE 163 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD---GQYYNAQHNP---VQWMEEEGYFFRLSAYQDK 175 + GWY + DE +Y + + K D G+ + A V+W E+ Y FRLSA++D+ Sbjct: 164 SKHEGWYCVSDETFYPESAIEKRLDPFTGRTFIASQETGKEVEWTSEKNYHFRLSAFKDQ 223 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWID 233 LL +YE +P+F++P+ R +V++ V GL+DLS+SR WGI++PDD +YVW+D Sbjct: 224 LLEFYEKNPDFVVPLTRMKDVVNQVSRGLEDLSISRPYDRLSWGIRVPDDETQTIYVWLD 283 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T GY P A WPAD+ VIGKDI+RFH IYWPAFLL+ NLP PK++ +H Sbjct: 284 ALVNYITKAGYPWAPGKETAGGWPADVQVIGKDIVRFHCIYWPAFLLALNLPPPKQILTH 343 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 +K+SKS+GNV++P+ ++ GVD +RY+L+ + +D Y + + +R Sbjct: 344 AHWTMDNQKMSKSIGNVVNPLFAMDRFGVDVMRYYLIHDGGIKEDSDYGNEYIVERYKKG 403 Query: 354 LANGIGNLVSRSVSMILKDYDGMIP---TPGAFTESDESILSV--CSRVLQEIRENMQNQ 408 L G+GNLVSR + + + + G+ + +I + + V + E MQ Sbjct: 404 LQQGLGNLVSRLTRPKVWNVRSCVEATHSQGSNNSNSTTIRQIDFLNSVRDKANEKMQEL 463 Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTN----PDRASTVLYVTVEVIRQLAILLQA 464 AL ++ V E ++Y + PW L K+ +R + +Y + E IR + ILLQ Sbjct: 464 NAGAALHVIMDTVYETNKYIQHEAPWSLAKSEDPEAKERLISAVYHSAEAIRIVGILLQP 523 Query: 465 FVPKLANKIFDILFVADENRCFQ 487 ++P+ A+ + D++ V E R ++ Sbjct: 524 YMPEKASLLLDMIGVLPERRTYE 546 >gi|33863015|ref|NP_894575.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313] gi|33634932|emb|CAE20918.1| putative methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313] Length = 515 Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 184/478 (38%), Positives = 277/478 (57%), Gaps = 17/478 (3%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+T + Y N +PH+G Y + +D LARF RL+G V+F TG DEHGQKI + A+ ++ Sbjct: 6 ITTPLYYVNDKPHLGSLYTTMASDALARFQRLEGKQVMFVTGVDEHGQKIQRTAEGNNIS 65 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 K DQ +R+++++ IS D FIRTT RH + ++ GD+Y G GWY Sbjct: 66 PKHHCDQITRSYQNLWSRWGISNDRFIRTTSHRHQLLVEAFFHRVETSGDVYLGRQQGWY 125 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E Y ++ A P++W +EE FF+LS +Q K+ S P+FI Sbjct: 126 CVGCEEYKDEP---PQAQSPCCPIHQKPLEWRDEENLFFKLSRFQSKIEDLI-SQPDFIW 181 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P+ RRNE+ +FV GL+D S+SR DWG+ +P P++ YVW DAL YL+ LD Sbjct: 182 PVMRRNEIQNFVAQGLRDFSISRVDVDWGLPVPGYPKHTFYVWFDALVGYLS--ALLD-- 237 Query: 249 DGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 DG + + WPA +H+IGKDILRFHA+YWPA L+SA LPLPK+VF HGF+ +G+ Sbjct: 238 DGGQVRIERLEECGWPASVHLIGKDILRFHAVYWPAMLISAGLPLPKQVFGHGFLTREGQ 297 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+ KSLGNV+DP +++E G DA+R++L+R+I G DG + + VN DLAN IGNL Sbjct: 298 KMGKSLGNVLDPEKLLEICGADAVRWYLLRDIQFGHDGDFQQKRFMDLVNNDLANTIGNL 357 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R+ +M K ++G +PT + +++ + +R++M + H A ++ L Sbjct: 358 LNRTSTMARKWFEGSVPTHRDEIDYAHPLVTTAETTITIVRQSMPSMAFHDAAEAILKLA 417 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + Y + PW KT + A LY +E R + +L+ VP L+ ++ + L Sbjct: 418 IAANVYLNETAPWSRMKTPGNEAEVADDLYSVLEACRLVGLLINPLVPSLSERLLNQL 475 >gi|325190049|emb|CCA24532.1| unnamed protein product [Albugo laibachii Nc14] Length = 589 Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 197/521 (37%), Positives = 302/521 (57%), Gaps = 44/521 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL----DGLDVLFTTGTDEHGQKIAKA 61 ++ I+T I Y N+ PHIGH + ++AD LAR++ + + +D L TTGTDEHG K+ +A Sbjct: 39 RMMITTPIYYVNSSPHIGHLHSSVLADALARWYNMKKGPNSIDALLTTGTDEHGLKVQQA 98 Query: 62 AQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ A F D S FR++ ++ Y +F+RT++ +HH + R W ++ G IY Sbjct: 99 AEKANAADYASFCDAISNQFRELFLHANMDYTEFVRTSDSKHHRSVRAFWNQLYGNGYIY 158 Query: 121 KGCYSGWYSLRDEAYYNDDEV------YKGADGQYYNAQH-------NPVQWMEEEGYFF 167 G + WY DE++ + +V G DG+ N + + V+ ++E Y F Sbjct: 159 LGQHEAWYCQSDESFLTEMQVEDSIRSTAGPDGEIINETYKISKESGHTVEKLKEVNYKF 218 Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISF-----VKSGLKDLSLSR--KTFDWGIKI 220 RLSA+Q LL + ES P+ I+P R NEV + +K+GL+D+S+SR + W I + Sbjct: 219 RLSAFQQPLLEWLESSPDVIVPKTRYNEVNHYTVRATIKAGLRDISVSRLHEKIKWAITV 278 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHAIYWPAFL 279 PDD Q+ +YVW+DALTNYLT GY PD K + WP D H++GKDIL+FHAIYWPAFL Sbjct: 279 PDDSQHCIYVWLDALTNYLTCAGY---PDAEKLDRVWPPDYHIVGKDILKFHAIYWPAFL 335 Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 ++A LPLPK++ +H K K+SKSLGNV++P E+I++ G DA+RY+L+RE G DG Sbjct: 336 MAAGLPLPKRIVAHAHWTVKDIKMSKSLGNVVNPFEIIKKYGTDAVRYYLLREGVLGSDG 395 Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVL 398 + L+ R++++LA+ +GNLVSRS + DG +P P T D ++ + Sbjct: 396 DFKLSLLENRLSSELADTLGNLVSRSTARSFL-VDGSVPRRPITLTPDDLELMKEGDAIA 454 Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK-------------KTNPDRAS 445 ++ + Q H+ L ++I + +++RYF + +PW LK + +R Sbjct: 455 AKVAVDFQIPDFHQGLQRIILYLHKLNRYFSSNEPWVLKTALDSQTLRPAEAEQATERLQ 514 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 +L +T++ R ILLQ +P+ A +I D L V R F Sbjct: 515 GILNITIDATRLCTILLQPAIPEAAERILDYLGVPRNERAF 555 >gi|254431009|ref|ZP_05044712.1| methionyl-tRNA synthetase [Cyanobium sp. PCC 7001] gi|197625462|gb|EDY38021.1| methionyl-tRNA synthetase [Cyanobium sp. PCC 7001] Length = 533 Score = 363 bits (931), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 187/480 (38%), Positives = 275/480 (57%), Gaps = 16/480 (3%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y N + H+G Y + D +AR+ RL G V+F TG DEHGQKI + A+ AGV+ Sbjct: 5 LTTPLYYVNDRAHLGSTYTTLACDAIARYQRLCGEQVVFITGCDEHGQKIQRTAEAAGVS 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D+ S +RD+ D IS+D FIRTT+ RHH+ + ++ +GD+ +G GWY Sbjct: 65 PQDHCDRISAGYRDLWDRWQISHDRFIRTTDPRHHELVAQFFARVEARGDVVEGRQQGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + +D + + + P++W +E FFRLS YQ ++ + + P+FI Sbjct: 125 CVACEEFKDDPHEAQDPECPTHR---RPLEWRDEVNLFFRLSRYQAEIEALI-AQPDFIQ 180 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P RR EV +FV GL+D S+SR WGI +P P + YVW DAL YL+ D Sbjct: 181 PPSRRREVENFVAQGLRDFSISRIDLPWGIPVPGHPGHTFYVWFDALLGYLSALLAADGS 240 Query: 249 --------DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 D + WPA LHVIGKDILRFHA+YWPA LLSA LPLP++VF HGF+ +G Sbjct: 241 GPPGPVDLDALLQRGWPAQLHVIGKDILRFHAVYWPAMLLSAGLPLPRQVFGHGFLTREG 300 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+ KSLGNV+DP ++E G D +R++L+R+I G DG + + VN DLAN IGN Sbjct: 301 QKMGKSLGNVLDPEVLLERCGRDPVRWYLLRDIPFGDDGDFQQQRFTDLVNNDLANTIGN 360 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L++R+ SM K +DG +P G + D + ++ ++ RA V+ L Sbjct: 361 LLNRTSSMARKWFDGAVPPAGEASAGDHPLAQATRLAGEQACAGLERLDFRRAAEAVLQL 420 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTV---LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + Y + Q PW+ K PD+ + V LY +E R +A+LL VP+L+ ++ L Sbjct: 421 ATAANGYLNDQAPWKRMKL-PDQETGVAADLYAVLEATRSVAVLLAPLVPELSARMLHQL 479 >gi|50954430|ref|YP_061718.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950912|gb|AAT88613.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 589 Score = 363 bits (931), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 191/481 (39%), Positives = 290/481 (60%), Gaps = 10/481 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 ++ YI+T I Y N PHIGHAY + ADVL R+HR G DV GTDEHGQKI + Sbjct: 6 LRNASSFYITTPIFYVNDVPHIGHAYTEVAADVLVRWHRQAGEDVWLLAGTDEHGQKILR 65 Query: 61 AAQNAGVTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A ++ + D+ + +R + + L IS DDFIRTTE RH + +KG + Sbjct: 66 TAAAQRLSPAEWTDRLVHDSWRPLLEALRISADDFIRTTEDRHKVVVIAFLTLLREKGLV 125 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGAD---GQYYNAQH-NPVQWMEEEGYFFRLSAYQDK 175 Y+G Y G+Y + E Y + ++ G GQ H V + E+ YFF++SA+QD+ Sbjct: 126 YEGTYEGFYCVGCEEYKQESDIIAGTGAFAGQVLCPVHARSVDVVNEKNYFFKMSAFQDR 185 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 LL + EF+ P RNE+++FV SGLKD+S++R +FDWG+++P +P +++YVW DAL Sbjct: 186 LLEML-ADEEFLRPAAVRNEILAFVGSGLKDISITRSSFDWGVEVPWEPGHVVYVWFDAL 244 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY++ G+ + + + WP D+H+IGKDI R HA+ WPA L++A+LP+PK++ +HG+ Sbjct: 245 LNYISGIGWGSDVEEFDRR-WP-DVHIIGKDIARLHAVLWPAMLMAADLPVPKRIVAHGW 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L GEK+SKS I P ++++ G+DA RY+ VR I G+DG + D + +R NADLA Sbjct: 303 LLVNGEKMSKSNATGIGPEQIVKAFGIDAFRYYFVRSIVFGQDGSFSWDDIHRRYNADLA 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 NG+GNLVSR+++MI K G++P A T +++ + ++ + + AL Sbjct: 363 NGLGNLVSRTIAMITKYRAGIVPEAAAPTAAEDEVRHTITQARANASAAIDRFALSEALG 422 Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 QV ++V ++ Y Q PW L + R TVL E +R+LA+LL+ F+P A I Sbjct: 423 QVWTIVERLNSYITEQTPWSLARDEAQAHRLDTVLNTVAEGLRELAVLLRPFLPDTAQAI 482 Query: 474 F 474 + Sbjct: 483 W 483 >gi|156081857|ref|XP_001608421.1| methionine- tRNA ligase [Plasmodium vivax SaI-1] gi|148800992|gb|EDL42397.1| methionine- tRNA ligase, putative [Plasmodium vivax] Length = 886 Score = 362 bits (929), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 180/477 (37%), Positives = 282/477 (59%), Gaps = 11/477 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + EK YI+TAI Y N PHIGHAYE+++AD +AR+H+ G V FTTG DEHG KIA A Sbjct: 218 KEEKFYITTAINYVNGDPHIGHAYEIVLADAIARYHKNIGRKVFFTTGADEHGLKIANQA 277 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 +T + D+N F+++ +L + D ++RTT ++H + +W K + DIY G Sbjct: 278 ARNNLTPQELCDRNVLKFKELNKLLHVDEDYYVRTTCEQHKKIAQEIWTKCEENKDIYLG 337 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y GWY++R+E Y ++E Y + +N ++ M+E YFF +S YQ +L+ Y Sbjct: 338 EYEGWYNVREETYVPENE---AKLMNYRDPLNNIKLEKMKEPSYFFNMSKYQQRLIDYIM 394 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +P FI P ++RNE++ +K L DLS SR F WGI +P D +++MYVW+DAL NY + Sbjct: 395 ENPHFIQPEQKRNEILQRLKEPLADLSCSRTKFSWGIPVPSDHKHVMYVWMDALINYYSN 454 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KG 300 ++ K +WPAD+H+IGKDI+ FH + +P L+S N+ LPK VF HGF+L G Sbjct: 455 CFIVE----GKEDYWPADVHLIGKDIVWFHTVIFPTILMSVNVALPKSVFCHGFVLAGDG 510 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKSLGNV++P E+IE G DA R+ +++E G D +D D L N+DLA+ IGN Sbjct: 511 KKMSKSLGNVVNPFEIIESYGPDAFRFHVIKETKRGFDMRFDIDNLVDMCNSDLADTIGN 570 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 LV R++S+ + I P F + D + + + +MQ + + +++ Sbjct: 571 LVQRTLSLCQLSNESKI--PPLFEQYDIDLPFSLLHFINRVEFHMQTYCVQVCCEKTVNV 628 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +++++ PW+ K D+ ++ + +E I +A L F+P +A+++F L Sbjct: 629 CKDLNKFLTELAPWKYKNEEKDKKLHIIRIMMEAIYLIAHYLDIFIPSIASQVFQKL 685 >gi|303248590|ref|ZP_07334846.1| methionyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] gi|302490031|gb|EFL49953.1| methionyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] Length = 651 Score = 362 bits (929), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 193/473 (40%), Positives = 283/473 (59%), Gaps = 10/473 (2%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + +I+T I Y NA+PH+GHAY I+ D LARFH L G +V F TGTDEHG KIA+AAQ A Sbjct: 3 RFFITTPIYYVNAKPHLGHAYTTIVVDALARFHALLGEEVFFLTGTDEHGDKIAEAAQKA 62 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T K + D S F + L I+ FIRTT+ H + + + + DKGDIY G Y Sbjct: 63 GQTPKEYADSISGLFSSLWPKLGIAPRRFIRTTDPDHKEAVKKALQLVYDKGDIYFGEYG 122 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y E + + E+ DG + + P +++ E+ YFFR+S YQ LL + +++P+ Sbjct: 123 GHYCKGCERFLTEKEL---VDGLCPDHKVKP-EYIAEKNYFFRMSKYQGALLEHIKANPD 178 Query: 186 FILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 FI P + RNEV+S ++SG L+DL +SR WGI++P D ++ YVW DAL NYLT Sbjct: 179 FIRPRQYRNEVVSLLESGALEDLCISRPKSRLTWGIELPFDDNFVTYVWFDALMNYLTAI 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 G+ D+PD SK +W HV+ KDIL+ HA++WP LL+ LPL K++ HG+ L + K Sbjct: 239 GWPDDPDFSK--WWDVAEHVVAKDILKPHAVFWPTMLLAMGLPLYKRLNVHGYWLVRDTK 296 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKSLGNVI+P+ + E+ G+ +RYFL+RE+ G D + + L R NADLAN +GNL Sbjct: 297 MSKSLGNVIEPLAMAEQAGLSGMRYFLLREMVFGSDASFSDEALIGRFNADLANDLGNLA 356 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 +R+++M K + G +P A +D + + + + RAL + LV Sbjct: 357 NRALAMTTKYFGGTVPASDAPQAADAELARLGREAMANFVQLFGAAQFSRALEALWELVR 416 Query: 423 EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +++Y DA PW L K+ + R TV+ + +RQ+A+ L +P+ A K+ Sbjct: 417 GLNKYIDAMAPWTLFKEGDTARLGTVMATVLGGLRQVAVCLLPVMPEAAEKLL 469 >gi|302038229|ref|YP_003798551.1| methionyl-tRNA synthetase [Candidatus Nitrospira defluvii] gi|300606293|emb|CBK42626.1| Methionyl-tRNA synthetase [Candidatus Nitrospira defluvii] Length = 663 Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 210/526 (39%), Positives = 300/526 (57%), Gaps = 30/526 (5%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +R+ YI+T I Y N PHIGHAY + ADVLAR+ RL G DV F TG DEHGQK+ + Sbjct: 1 MNKRDTFYITTPIYYVNDVPHIGHAYTTVAADVLARYWRLRGRDVFFLTGLDEHGQKVQQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA AGV + D+ + F ++ L+IS D FIRTT+K H + +++ DK IY Sbjct: 61 AAAKAGVAPQAHCDRLAPQFTNLWQRLNISNDAFIRTTDKPHQAVVQRYLQQLYDKQLIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y+GWY DE ++ + +V G P++ + E YFF++ YQ++L+ + Sbjct: 121 KADYTGWYCTYDERFWTEKDVVNGLCPDC----KRPIERLSEHNYFFKMGQYQERLIEHI 176 Query: 181 ESHPEFILPIERRNEVISFVKS-GLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTN 237 +H +FI P+ RRNEV+ F+++ L DLS+SR WGI++P D +Y+ YVW DAL N Sbjct: 177 RTHDDFIRPVSRRNEVLGFLQTQKLGDLSISRPKSRLSWGIELPFDKEYVTYVWFDALVN 236 Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 Y++ Y + +FWPAD H++GKDIL HA+YW L++ PLP +F+HG+ Sbjct: 237 YVSALEYKPGLE----RFWPADAHLVGKDILTTHAVYWSTMLMALERPLPHSIFAHGWWT 292 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 GEK+SKS GNV+DP +I++ G DA RYFL+RE+ G+DG + + + +N+ LANG Sbjct: 293 VDGEKMSKSRGNVVDPNAMIDQFGADAFRYFLLREVPFGQDGDFSRTTMVTTINSALANG 352 Query: 358 IGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 IGNL+SR+++MI + G IP P E ++ I V ++ I L L Sbjct: 353 IGNLLSRTLTMIERSCAGTIPDRGPAVLPELEQRIEDVARQLPGRIEAGYNALLFRDVLL 412 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANK 472 V L S D Y D PW+L K P+ + TVL + +R LAILL F+P A + Sbjct: 413 MVEELNSACDEYIDKSAPWKLAK-QPEAQPQLHTVLNTSARALRLLAILLYPFMPTAAQQ 471 Query: 473 IFDILF--------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + L V+DEN S D+ L G + K +FPR Sbjct: 472 MIHQLGLSLDLSQPVSDEN---SSWDKTLA-GSRIQKGAS-LFPRI 512 >gi|300870561|ref|YP_003785432.1| methionyl-tRNA synthetase [Brachyspira pilosicoli 95/1000] gi|300688260|gb|ADK30931.1| methionyl-tRNA synthetase [Brachyspira pilosicoli 95/1000] Length = 649 Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 209/520 (40%), Positives = 315/520 (60%), Gaps = 22/520 (4%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I YP+ HIGH Y I D +AR+ ++ G DV F TGTDEHG+KI + A+ Sbjct: 4 KKFYITTPIYYPSDYLHIGHCYCTIATDTMARYKKIMGYDVYFLTGTDEHGEKIQRKAEE 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 A T K +VD + + L I Y +IRTT+ H + ++K++ DKG IYKG Y Sbjct: 64 AKTTPKEYVDNIVDATKKLWKRLHIDYSHYIRTTDDYHERRVQNIFKQLYDKGYIYKGSY 123 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNA-QHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 G Y + DEA++ + +V K DG+ Y +++ EEE Y+ +LS + D L++YY+ H Sbjct: 124 KGLYCVSDEAFFTESQVVKKDDGKCYCPDCEKELEYKEEECYYLKLSEFGDWLINYYKEH 183 Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 PEF+ P ER+NE++ +F+ GL+DL+++RK WGI P D ++ +YVWIDAL+NY+T Sbjct: 184 PEFLEPKERQNEMLKNFLLPGLEDLAVTRKGLKWGIPCPIDNEHSIYVWIDALSNYITAL 243 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGE 301 GY + + K K+WP D+H +GK+I+RFHAI WP L ++PLPKKVF HG++L G+ Sbjct: 244 GYSEEDELYK-KYWPCDVHFVGKEIVRFHAIIWPIMLKMLDIPLPKKVFGHGWVLFDDGK 302 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP +I++ GVDALRYFL+REI G DGFY ++ KR+N+DLAN GNL Sbjct: 303 KMSKSRGNVVDPNALIDKYGVDALRYFLMREINFGVDGFYSQEIFLKRINSDLANDYGNL 362 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE----IRENMQNQL----IHRA 413 R +M+ K +DG++P E ES+ S R L++ + N+++ L A Sbjct: 363 WHRITTMLGKYFDGILP------EEVESVYSDRERELKKAVLTLDANVESALDSFKFQEA 416 Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 L + ++ V++Y + PW L K + D + V+Y++ + + LQ F + Sbjct: 417 LFNIWEVIRMVNKYVEESAPWNLAKDESKRDHLANVMYISFQAYYIVTAYLQIFFVETPK 476 Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 K+F+ L + D + LK G + K +P+F R+ Sbjct: 477 KVFNRLGLGDSVPLEDAKKWGSLKAGIKIEKG-EPLFNRY 515 >gi|297566227|ref|YP_003685199.1| methionyl-tRNA synthetase [Meiothermus silvanus DSM 9946] gi|296850676|gb|ADH63691.1| methionyl-tRNA synthetase [Meiothermus silvanus DSM 9946] Length = 642 Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 204/481 (42%), Positives = 289/481 (60%), Gaps = 19/481 (3%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAI Y NA PHIGH YE I+AD LAR+HRLDG F TGTDEHG+KIA+AA AG Sbjct: 6 YITTAIDYANAAPHIGHVYEKILADFLARWHRLDGYQTYFLTGTDEHGEKIARAAAKAGK 65 Query: 68 TTKVFVDQNSR-NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + K FVD+ S +FR + D L ISYDDFIRTT++RH + + +++ + GDIY Y G Sbjct: 66 SPKEFVDELSEGSFRALYDRLQISYDDFIRTTQERHKKYVQQVLQRVYEAGDIYYAEYEG 125 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 YS+ E + + E+ G P E YFFR+ Y+ LL + + +PEF Sbjct: 126 LYSVGAERFVTEKELVDGV----LPGDSEPPVLRREANYFFRMEKYRPWLLEHLQQNPEF 181 Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P+ RNEV+ +K + DLS+SR + WGI IP D ++ YVW DAL NY++ Sbjct: 182 IQPVGYRNEVLEMLKEPIGDLSISRPKERVPWGIPIPWDENHVTYVWFDALLNYVSAL-- 239 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKI 303 G +W HVIGKDIL+ HA++WP L +A LPL +K+ HG IL G K+ Sbjct: 240 --VSKGIFEPYWRHCWHVIGKDILKPHAVFWPTMLKAAGLPLYEKLVVHGHILALDGRKM 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 KSLGN IDP E++E+ GVDAL Y L+R+ D + + + R+N+DLAN +GNL+S Sbjct: 298 GKSLGNAIDPAEMLEKYGVDALHYALLRDTTLAADSPFGEPVIVSRLNSDLANDLGNLLS 357 Query: 364 RSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R +M+LK G++P P GA ++ +S+ ++V IRE N AL +++ V Sbjct: 358 RVRTMLLKYCGGVLPEPSGADSDIAREGVSLAAKVRPLIRELRFNL----ALEEILQYVR 413 Query: 423 EVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +++Y + QKPWEL + + + + VLY VE +R ++LL+A +P A ++ L + Sbjct: 414 SLNKYVNDQKPWELARDDSRKKTLEEVLYTVVEGLRIASVLLEAALPNKAKELRSGLGLG 473 Query: 481 D 481 D Sbjct: 474 D 474 >gi|261204906|ref|XP_002627190.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] gi|239592249|gb|EEQ74830.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] gi|239611595|gb|EEQ88582.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis ER-3] gi|327348391|gb|EGE77248.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188] Length = 580 Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 198/503 (39%), Positives = 290/503 (57%), Gaps = 22/503 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKA 61 +++ Y++T I Y NA PH+GH Y MI+ADVL R+ L G D TGTDEHG KI +A Sbjct: 51 DKKPFYVTTPIFYVNAAPHVGHLYTMIVADVLKRWQILLGNTDAKLLTGTDEHGLKIQQA 110 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A G+T + DQN F+++A ++ YD FIRTT+ H + R W ++ +G IY Sbjct: 111 AAALGMTPQELCDQNCLTFKNLARKGNVEYDHFIRTTDAEHKEAVRYFWDMLNHRGYIYT 170 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDK 175 + GWYS+ DEA+Y V D VQW EE Y FRLSA+++ Sbjct: 171 SKHEGWYSVSDEAFYPPSAVQPTLDPSTGRKIITSVETGKEVQWTSEENYHFRLSAFKEP 230 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233 LL ++ +P FI P + ++S V SGL+DLS+SR WGI +P D ++YVW+D Sbjct: 231 LLEHFRKNPGFITPRNYMDGIVSDVSSGLQDLSISRPASRLKWGIPVPYDESQVIYVWLD 290 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T GY P GSK+ WPA++HV+GKDILRFH IYWPAFL++ +LPLP+++ +H Sbjct: 291 ALVNYITYAGY-PFPHGSKS-IWPANVHVVGKDILRFHCIYWPAFLMALDLPLPRQILAH 348 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G EK+SKS GNV++P IE G+D +R++L + A D Y+ + +R Sbjct: 349 GHWTINHEKMSKSTGNVVNPNFAIERFGIDTMRFYLTIDGAQSSDSDYENSYIIERYKKG 408 Query: 354 LANGIGNLVSRSV---SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410 L GIGNL SR + ++D ++ T G T L + + ++ M+ Sbjct: 409 LQWGIGNLTSRLLRGKKWNVRD-SIVMATEGQLTRDKHHDL--LEMIPERVKAEMEQLDP 465 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFV 466 RAL ++ ++ + ++YF +PW L K NP++ + VLY T E +R ILLQ F+ Sbjct: 466 RRALNSIMEIIYQTNKYFHEMQPWSLVKNPSADNPNQLNDVLYTTAESLRIAGILLQPFM 525 Query: 467 PKLANKIFDILFVAD-ENRCFQS 488 P+ + ++ D+L VA+ E R F + Sbjct: 526 PQKSLELLDMLGVAEVEKRNFNA 548 >gi|116074880|ref|ZP_01472141.1| methionyl-tRNA synthetase [Synechococcus sp. RS9916] gi|116068102|gb|EAU73855.1| methionyl-tRNA synthetase [Synechococcus sp. RS9916] Length = 514 Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 187/474 (39%), Positives = 268/474 (56%), Gaps = 9/474 (1%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y N +PH+G Y + D LARF RL+G DV+F TG DEHGQKI + A + GVT Sbjct: 5 LTTPLYYVNDKPHLGSTYTTLACDALARFQRLEGNDVVFITGVDEHGQKIQRTAADRGVT 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D ++ + + IS D F+RTTE+RH +K+ GDI G +GWY Sbjct: 65 PQEHCDAITKRYISLWSDWGISNDRFVRTTEERHLPLVEAFFKRCEANGDIRIGRQTGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + DE + D Y ++W +EE FF LS +QDK+ S P+FI Sbjct: 125 CVGCEEF--KDEPPEAKD-PYCPIHQKALEWRDEENLFFCLSNFQDKIEQLI-SQPDFIA 180 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT---GYL 245 P RR E+ +FV GL+D S+SR WG+ +P P + YVW DAL YLT G Sbjct: 181 PANRRKEIQNFVAGGLRDFSISRVNVSWGLPVPGHPGHTFYVWFDALLGYLTALLDDGGT 240 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + D + WPA +HVIGKDILRFHA+YWPA L+SA LP+P +VF HGF+ +G+K+ K Sbjct: 241 VDLDRLASVGWPAQMHVIGKDILRFHAVYWPAMLMSAGLPVPARVFGHGFLTREGQKMGK 300 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGNV+DP ++E G DA+R++L+R+I G DG + + VN DLAN IGNL++R+ Sbjct: 301 SLGNVLDPELLLERCGTDAVRWYLLRDIQFGDDGDFQQQRFSDLVNNDLANTIGNLLNRT 360 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 SM K + +P G +D + + ++R+ M + RA V+ L + + Sbjct: 361 ASMARKWFGDAVPQAGTAIATDHPLRQHAEAAIGQVRDAMPDMAFQRASEAVLQLAIQAN 420 Query: 426 RYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y + + PW L K D + LY +E R + +LL VP L+ +I + L Sbjct: 421 GYLNERAPWSLMKQPGQEDAVGSDLYAVLECCRIVGLLLNPLVPDLSERILNQL 474 >gi|224438096|ref|ZP_03659035.1| methionyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] gi|313144540|ref|ZP_07806733.1| methionyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] gi|313129571|gb|EFR47188.1| methionyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] Length = 655 Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 192/518 (37%), Positives = 307/518 (59%), Gaps = 20/518 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++K +I++ I Y N PHIGHAY I+ D+L +F L G DVLF TGTDEHGQKI ++AQ Sbjct: 2 QQKTFITSPIYYVNDIPHIGHAYTTILCDMLKKFRILQGEDVLFLTGTDEHGQKIEQSAQ 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 T + + D S F+++ + + YD F+RTT+ +H + + ++ + +KGDIYKG Sbjct: 62 KHNQTPQAYADSVSVKFKELWNEFQLDYDIFVRTTDSKHCQSVQKAFEIMFEKGDIYKGS 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + E+++ ++ + Q Q ++EE YFF LS YQDKLL +Y+ + Sbjct: 122 YEGNYCVSCESFFTQSQLGENLSCPDCGKQ---TQIVQEESYFFALSKYQDKLLEFYKQN 178 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ------YIMYVWIDALTN 237 P I P R+NEV+ F+ GL DLS++R +F+WGI + ++P+ + +YVW+DAL + Sbjct: 179 PNMIAPAFRQNEVVKFISEGLNDLSITRTSFEWGIPLLENPKRNDNKKHTIYVWLDALLS 238 Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 Y++ GY+ D K ++W LH +GKDILRFHA+YW AFL+S +LPLPK +++HG+ Sbjct: 239 YISPLGYMQ--DSHKMEYWENALHFVGKDILRFHAVYWIAFLMSLDLPLPKHIYAHGWWT 296 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 G K+SKS+GNVIDP V + G+++LRYFL+RE+ G+DG + + L +R+N++L N Sbjct: 297 KDGAKMSKSIGNVIDPKAVAQAYGIESLRYFLMREMPFGQDGDFSQKALIERINSELGND 356 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 +GNL++R + M K + + + F ++ L+ ++ +E MQ R + Sbjct: 357 VGNLLNRLLGMSEKYFSLQVDSKDVKKFYATE---LNELEHIINRTQEKMQTMQPQRYIE 413 Query: 416 QVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 ++ + S + +PW L K D+A +L + ++ + A+LL +P+ A+KI Sbjct: 414 ELWAAFSLGNGVITKYEPWNLMKNAEQDKAMALLGLIANILAKAALLLYPIMPESAHKIA 473 Query: 475 DILFVADENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510 L ++ F L ++ L L K P+FPR Sbjct: 474 KALSLSISPDSFDRLIKQHALLDDLTLTK-IPPLFPRI 510 >gi|58697284|ref|ZP_00372656.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila simulans] gi|58536361|gb|EAL59826.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila simulans] Length = 447 Score = 360 bits (923), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 192/446 (43%), Positives = 267/446 (59%), Gaps = 44/446 (9%) Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161 H LW ++ ++G IY YSGWYS+RDEA+Y + E+ DG+ VQW++ Sbjct: 1 HKKAVIALWNRLEERGQIYLDSYSGWYSVRDEAFYQESELI---DGKAPTGAE--VQWIK 55 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 EE YFFRLS +QDKLL Y++ P FI P RRNEVISFV+SGL DLS+SR +F+WGIK+P Sbjct: 56 EESYFFRLSNWQDKLLELYKNQPSFIFPESRRNEVISFVRSGLIDLSISRTSFNWGIKVP 115 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA----------------------- 258 + ++++YVWIDALTNYLT+ G+ +FW Sbjct: 116 GNDKHVIYVWIDALTNYLTSIGFPSTEGEEYKRFWAEPETQIPVSSTGMTPNQGKTQIPV 175 Query: 259 --------------DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 ++HVIGKDILRFHA+YWPA LL+A+LPLPK++ HG+ L++GEKIS Sbjct: 176 SSTGMTPNLADNSFNVHVIGKDILRFHAVYWPAILLAADLPLPKQIAVHGWWLNEGEKIS 235 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSLGNVIDPI + +E GVD LRYFL+RE + G+DG + K + R+N++LAN IGNLV R Sbjct: 236 KSLGNVIDPIGLAQEFGVDQLRYFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQR 295 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 ++S + K G++PT E L C +L ++ ++ + + +I++ SE Sbjct: 296 TISFLHKQCSGIVPTIDQILLKGEESLPGCKAILDQVMNHLSKYEFNHIILLIINISSEA 355 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + Y D PW L KT+ +R + V+Y +E IR + ILLQ VPK A I + L + E R Sbjct: 356 NAYIDKSAPWTLSKTDRERVNLVIYKLLEYIRIIGILLQPIVPKSAEMILNQLQIPKEQR 415 Query: 485 CFQSL-DQRLKPGFMLHKTFDPIFPR 509 +SL + + G L K P+F R Sbjct: 416 DLKSLCNACVSLGITLPKP-TPVFLR 440 >gi|56417068|ref|YP_154142.1| methionyl-tRNA synthetase [Anaplasma marginale str. St. Maries] gi|56388300|gb|AAV86887.1| methionyl-tRNA synthetase [Anaplasma marginale str. St. Maries] Length = 455 Score = 359 bits (922), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 184/455 (40%), Positives = 283/455 (62%), Gaps = 14/455 (3%) Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ GV FVD+ S FR++ V +DFIRTTE+RH LW+++ IY Sbjct: 2 ARARGVPVHQFVDEISGAFRNLVGVSGFRCNDFIRTTEERHKRAVLALWERLRGNNQIYL 61 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 G Y+G+YS+RDE +Y + ++ DG+ V+W+EE GYFF+LS +Q+ LL +Y Sbjct: 62 GHYAGFYSVRDETFYQERDL---VDGKAPTGAE--VEWLEEPGYFFKLSEWQESLLKFYA 116 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYL 239 +PEF++P + NEVISFV+SGL+DLS+SR K+ WGI++P D +I+Y+W+DAL YL Sbjct: 117 DNPEFVIPEGKFNEVISFVESGLRDLSVSRSKKSLSWGIEVPHDSDHIIYIWVDALCCYL 176 Query: 240 TTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 G+ + +G ++W +D HV+GKDILRFHA+YWPA L++A+LPLPK++ +HG+ Sbjct: 177 ALLGFPET-EGEYKRYWGSDGAVSTHVVGKDILRFHAVYWPALLMAADLPLPKQIVAHGW 235 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 L++G+KISKS+GNVIDP +IE+ G+D RYFL+ E G D + L +R+N DLA Sbjct: 236 WLNEGQKISKSIGNVIDPFALIEQYGLDNCRYFLLSETPVGNDASFSGASLVERINCDLA 295 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N GNLV R+++++ ++ G IP + +E+ ++ + ++Q + E M AL Sbjct: 296 NNFGNLVQRTITLVHRECGGKIPEVEGMMQGEEAPINYEAVLVQYV-EYMAEYRFFEALK 354 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 V++L S + Y + PW+L K + A V++ +E IR + I+LQ FVP A+KI D Sbjct: 355 FVMNLSSVANEYIARRAPWKLFKEDRKSAQAVVFKLLEYIRCIGIMLQPFVPDSASKILD 414 Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + + + R F+ + + G L T P+F + Sbjct: 415 QISLPADRRTFEHFSEFCRGGVSL-GTPTPVFGKL 448 >gi|37522592|ref|NP_925969.1| methionyl-tRNA synthetase [Gloeobacter violaceus PCC 7421] gi|35213593|dbj|BAC90964.1| methionyl-tRNA synthetase [Gloeobacter violaceus PCC 7421] Length = 516 Score = 359 bits (922), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 201/516 (38%), Positives = 293/516 (56%), Gaps = 21/516 (4%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y NA PHIG AY + AD +AR+HRL G V F TGTDE+G KI + A +T Sbjct: 7 LTTPLFYVNALPHIGSAYPTLAADAVARYHRLRGRSVRFVTGTDEYGLKIERQAAERHLT 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + ++ + F + L I YD FIRTT+ RH R +++ GDIYKG Y+G Y Sbjct: 67 PREHCNEIAAGFEKLWRALSIDYDRFIRTTDPRHAAIVREFFERCWQAGDIYKGRYTGLY 126 Query: 129 SLRDEAYYND-DEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 + E + DE Y +G+ H P++ +EE Y F LS YQ KL Y++ HPEF Sbjct: 127 CIDCEEFKKKPDEDYFIENGEPRCKIHLKPLREQDEENYIFALSRYQQKLEQYFDEHPEF 186 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT-GYL 245 + P R +EV +F+ GL+D S+SR WG+ IP D +YVW +AL Y+T Sbjct: 187 VQPDFRAHEVRNFIAGGLEDFSISRANVSWGLPIPVDSSQTIYVWFNALLGYVTALLEPE 246 Query: 246 DNP--DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 D P + + A++WP DLH++GKDILRFHA+YWPA L+SA LPLP +F HGF+ G K+ Sbjct: 247 DEPTLENALARWWPIDLHIVGKDILRFHAVYWPAMLMSAGLPLPGMIFGHGFLTRDGRKM 306 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 K+LGNVIDP ++E+ G DA+RY+ ++ I G+D +++ ++ +NADLAN +GNL++ Sbjct: 307 GKALGNVIDPGVLVEQYGSDAVRYYFLKAIEFGRDNDFNETRFREILNADLANDLGNLLN 366 Query: 364 RSVSMILKDYDGMIPTPG-----AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 R+ +M++K G+IP+ A + + VC+ + +R A + Sbjct: 367 RTGNMVVKYCGGVIPSVAIDPTDALRDKATGLAQVCAEHWEALR-------FSEASGLAL 419 Query: 419 SLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +LV +RY DA+ PW L KK + VLY +E +R A+LL +P LA +I+ L Sbjct: 420 ALVRAGNRYLDARAPWSLYKKGEQVQVEQVLYAVLESVRIAAVLLSPLIPGLAAEIYRQL 479 Query: 478 ---FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 A E+R + PG P+FPR Sbjct: 480 GFSVQAWEDRSWDDALWGGLPGGQPLCLGSPLFPRL 515 >gi|15233258|ref|NP_191100.1| OVA1 (OVULE ABORTION 1); ATP binding / aminoacyl-tRNA ligase/ methionine-tRNA ligase/ nucleotide binding [Arabidopsis thaliana] gi|7076783|emb|CAB75898.1| methionyl-tRNA synthetase (AtcpMetRS) [Arabidopsis thaliana] Length = 616 Score = 359 bits (922), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 197/517 (38%), Positives = 291/517 (56%), Gaps = 14/517 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E E ++T + Y NA PH+G AY I AD +ARF RL G V+F TGTDEHG+KIA +A Sbjct: 67 EGETFVLTTPLYYVNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKIATSA 126 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G D S+++R + LDI+YD FIRTT+ +H + + ++ GDIY+ Sbjct: 127 AANGRNPPEHCDLISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIYRA 186 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y + E Y ++ E+ + P +E+ YFF LS YQ L Sbjct: 187 DYEGLYCVNCEEYKDEKELL---ENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDILAQ 243 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY---L 239 +P F+ P R NEV S++KSGL+D S+SR DWGI +PDD + +YVW DAL Y L Sbjct: 244 NPRFVQPSYRLNEVQSWIKSGLRDFSISRALVDWGIPVPDDDKQTIYVWFDALLGYISAL 303 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T N + + + WPA LH+IGKDILRFHA+YWPA L+SA L LPK VF HGF+ Sbjct: 304 TEDNKQQNLETAVSFGWPASLHLIGKDILRFHAVYWPAMLMSAGLELPKMVFGHGFLTKD 363 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+ KSLGN ++P E++++ G DA+RYF +RE+ G DG Y +D K VNA LAN IG Sbjct: 364 GMKMGKSLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLANTIG 423 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL++R++ ++ K+ + + + +++++ R N +N + A V+ Sbjct: 424 NLLNRTLGLLKKNCESTLVVDSTVAAEGVPLKDTVEKLVEKARTNYENLSLSSACEAVLE 483 Query: 420 LVSEVDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 + + + Y D + PW L K + + A+ L + +EV+R +A+ L P L+ +I+ Sbjct: 484 IGNAGNTYMDQRAPWFLFKQGGVSAEEAAKDLVIILEVMRVIAVALSPVAPCLSLRIYSQ 543 Query: 477 L-FVADENRCFQSLDQR---LKPGFMLHKTFDPIFPR 509 L + D+ D + LK G ++ + P+F R Sbjct: 544 LGYTEDQFNSITWSDTKWGGLKGGQVMEQA-SPVFAR 579 >gi|320037850|gb|EFW19787.1| methionyl-tRNA synthetase [Coccidioides posadasii str. Silveira] Length = 584 Score = 359 bits (921), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 190/509 (37%), Positives = 280/509 (55%), Gaps = 26/509 (5%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61 +R+ Y++T I Y NA PH+GH Y +++AD+L R+ L G D TGTDEHG KI +A Sbjct: 47 QRKPYYVTTPIFYVNASPHVGHLYTLVLADILKRWQVLLGNNDAQLLTGTDEHGIKIQQA 106 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A + G+ DQN + F+D+A ++ +D FIRTT+ H D + W+ + +G IY Sbjct: 107 AASHGLEPIKLCDQNCQTFKDLAQKANVQHDHFIRTTDPEHRDAVQYFWEMLDHRGYIYT 166 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDK 175 + GWYS+ DE +Y + V+ D V+W E Y FRLSA++D+ Sbjct: 167 AKHEGWYSVSDETFYPSNAVHATLDPATGRKIMSTIETGKEVEWFSETNYHFRLSAFKDR 226 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWID 233 LL +Y +P FI P + ++ V SGL DLS+SR + WGI++P D +YVW+D Sbjct: 227 LLDFYRENPTFIRPKRYMDNIVQSVSSGLTDLSISRPVQRLTWGIRVPGDDTQTIYVWLD 286 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NYLT GY P WPA++HV+GKDILRFH +YWPAFL++ +LPLP++V SH Sbjct: 287 ALINYLTYAGYPFTPGKENQSIWPANVHVVGKDILRFHCVYWPAFLMALDLPLPRQVLSH 346 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 EK+SKS GNV++P+ + GVD LR++L + D Y+ + +R Sbjct: 347 AHWTIGREKMSKSTGNVVNPMYALARFGVDPLRFYLAHDGGLSDDADYENAFVTERYKKT 406 Query: 354 LANGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405 L G+GNL SR V I +G P P +E+D + + R M Sbjct: 407 LQWGVGNLTSRLVRSKKWNVRRSIEWGVEGRFPPP---SEADRKHQQLLEGIRDVTRSWM 463 Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAIL 461 + +A V+ ++ E ++YF +PW + + T P S V+Y T E +R IL Sbjct: 464 DDLNPRKAAESVVGIIHETNKYFQEARPWSMAEQSGNTEPTELSRVIYNTAESLRIAGIL 523 Query: 462 LQAFVPKLANKIFDILFVAD--ENRCFQS 488 LQ F+P+ + ++ D+L VA E R F++ Sbjct: 524 LQPFMPEKSARLLDMLGVAGDPEKRSFEA 552 >gi|110004172|emb|CAK98510.1| probable methionyl-trna synthetase transmembrane protein [Spiroplasma citri] Length = 526 Score = 359 bits (921), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 197/496 (39%), Positives = 292/496 (58%), Gaps = 12/496 (2%) Query: 1 MKEREKL-YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M + +KL Y++T I YP+AQ HIGHAY +AD+L R+ ++ G + F TG+DEHG+KI Sbjct: 1 MSQNKKLFYVTTPIYYPSAQLHIGHAYTTTLADILNRYKKMAGYETFFLTGSDEHGEKIE 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 K A+ AG+T F+ NF+ + + L I Y FIRTT+K H + ++ K+ + GDI Sbjct: 61 KKAKTAGITPYQFITMIVDNFKLLWNKLGIEYSKFIRTTDKEHEVGVQKIFSKLYNNGDI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 Y G Y G Y + E + + ++ K + Q + P Q ++EE YFF++S Y L++Y Sbjct: 121 YLGEYEGLYCVSCEEFLTEAQIDKITN-QCLVCGNKP-QKVKEETYFFKVSKYSQFLINY 178 Query: 180 YESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 Y +HP FI P R+NE++ +F+ GL DLS++R TF WGIK ++ ++I+YVWIDAL+NY Sbjct: 179 YNNHPGFIEPEARKNEMLNNFILPGLTDLSVTRTTFSWGIKTLENDKHIIYVWIDALSNY 238 Query: 239 LTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 LT GYL N D KFW L ++GK+I RFH IYWP+ L S L P K+ SHG Sbjct: 239 LTALGYLSNDDALFNKFWNNPDVEILQLLGKEIARFHTIYWPSMLESLGLRQPNKLLSHG 298 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +IL K K+SKS+GNV+DP+ +I++ G D LR++L EI DG + + + NA L Sbjct: 299 WILFKDTKMSKSIGNVVDPLYLIDKYGRDTLRFYLGYEIPTENDGKFSYEMFLESYNAHL 358 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N IGNLVSR +MI K ++G + D ++ C + +Q ++ M I L Sbjct: 359 VNNIGNLVSRVSNMISKYFNGQLVKQQQL---DNVLIESCVQAVQNYQQAMDAYQISEGL 415 Query: 415 AQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + ++ L ++ ++Y + KPWEL+K N ++ L I A LLQ + A KI Sbjct: 416 SMILELCNKANKYIEENKPWELEKNKNMEQLHETLASLAYTIIVSAFLLQPVLVDNAQKI 475 Query: 474 FDILFVADENRCFQSL 489 D V N F+++ Sbjct: 476 ADYFNVNLTNLTFKTI 491 >gi|308271750|emb|CBX28358.1| Methionyl-tRNA synthetase [uncultured Desulfobacterium sp.] Length = 640 Score = 358 bits (920), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 204/517 (39%), Positives = 304/517 (58%), Gaps = 21/517 (4%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+T I Y NA+PH+GHAY IIADV+ R++ + G D TGTDEHG K+ +AA+ Sbjct: 3 DNFYITTPIYYVNAKPHLGHAYTTIIADVVCRYNTMLGKDAFLLTGTDEHGDKVVRAAEK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D+ SR FR++ L+I Y+ FIRTT+ H + + + +KI D GDIY Y Sbjct: 63 ENLNPKEYADKISRLFRNLWPELNIKYNSFIRTTDPSHIEIVKQVLQKIYDSGDIYFSEY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y E +Y + E+ +G+ + + P + ++E YFF++S YQD L+ + HP Sbjct: 123 EGLYCFGCERFYTEREL---VNGKCPDHETEP-ETIKESNYFFKMSRYQDWLIDHIRRHP 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR-KT-FDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 +FI P +NEV+SF+K L+DL +SR KT +WGI +P D +Y+ YVW DAL NY+T Sbjct: 179 DFIRPERYKNEVLSFLKDPLEDLCISRPKTRLEWGISLPFDDKYVTYVWFDALLNYVTAL 238 Query: 243 GYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY PDG K+WP H++ KDIL+ H IYWP L +A +PL K + HG+ Sbjct: 239 GY---PDGEFFKKYWPEAQHIVAKDILKPHGIYWPIILKAAGIPLFKHLNVHGYWNIDQS 295 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV++P+ + G+DA RYFLVRE+ G D ++++ L R+N+DLAN IGNL Sbjct: 296 KMSKSLGNVVEPLSLKNTYGLDAFRYFLVREMVFGLDSGFNEEALVSRINSDLANDIGNL 355 Query: 362 VSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 SR ++M+ K + G+IP P E + S L E ++ M++ H+AL V Sbjct: 356 FSRVITMVHKYFGGVIPEINPETEDEMQGGLKFDASAALSEYKKAMESFSFHKALMSVWE 415 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++++++Y D PWEL K +R V+Y +E +R ++ L+ +P A + L Sbjct: 416 FINQMNKYVDTTAPWELAKKKSERKELEFVIYNLLEGLRIVSGLIYPVMPDTAKTMQQHL 475 Query: 478 FVADENRCFQSLDQR-----LKPGFMLHKTFDPIFPR 509 E+ F L+Q LK G + K+ +FPR Sbjct: 476 GQNPES-IFYDLNQLKSWKVLKAGTSIPKSVT-LFPR 510 >gi|295111687|emb|CBL28437.1| methionyl-tRNA synthetase [Synergistetes bacterium SGP1] Length = 650 Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 199/484 (41%), Positives = 294/484 (60%), Gaps = 9/484 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I Y N PHIGHAY I D ++R+ R+ G DV F TGTDEHGQK+ AA+ G Sbjct: 9 FYITTPIYYVNDVPHIGHAYTTIACDAMSRYKRMKGCDVRFLTGTDEHGQKVQAAAEKRG 68 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 V + VD+ NF+++ VL++S DDFIRTTE RH + ++K++ D+GDIYKG Y G Sbjct: 69 VAPQDLVDRIHLNFKELWRVLNVSNDDFIRTTEPRHVRVVQDMFKRLMDQGDIYKGEYEG 128 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y + EAY + + G G + P+ M+EE YFFR S Y +L+ +YE H + Sbjct: 129 KYCVPCEAYVPESSM--GPGGTCPDCGR-PLTVMKEESYFFRGSRYVPQLIEHYEKHLKG 185 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 ++P R NE++SF+K ++D S+SR T WGI +P D ++++YVW DAL NY + GYLD Sbjct: 186 VMPRIRYNEIMSFLKGEVRDQSVSRTTLKWGIPVPGDEKHVIYVWFDALINYASAIGYLD 245 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 + + ++WP HV+GKDI+RFH + WP LL+ LPLP + +HG+ GEK+SKS Sbjct: 246 D-RSTFDRYWPHVRHVVGKDIIRFHCVIWPLMLLALGLPLPVSIVAHGWWTVDGEKMSKS 304 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNV+DP V+EE G+D RYFL+REI G DG + + L R+N+DLAN +GNL++R++ Sbjct: 305 RGNVVDPCRVVEEYGLDPFRYFLLREIPFGHDGDFSEAALVGRINSDLANDLGNLLNRTL 364 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVC--SRVLQEIRENMQNQLIHRALAQVISLVSEV 424 MI +G +P + E E+ C L+ E M++ AL ++ S + Sbjct: 365 KMIQDYREGTVPAE-SLREMPEARDLQCQAQAALEGTDEAMEDFSFDEALKRIWSFIGRA 423 Query: 425 DRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADE 482 +++ D PW L K+ + D +VL E +R A+++ F+P+ A +I+ L + D Sbjct: 424 NKFIDETMPWRLAKEGSGDALDSVLLNLYEALRLSALMVAPFMPETAQRIWGQLGLEGDP 483 Query: 483 NRCF 486 +C Sbjct: 484 LKCL 487 >gi|297622523|ref|YP_003703957.1| methionyl-tRNA synthetase [Truepera radiovictrix DSM 17093] gi|297163703|gb|ADI13414.1| methionyl-tRNA synthetase [Truepera radiovictrix DSM 17093] Length = 655 Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 196/512 (38%), Positives = 287/512 (56%), Gaps = 13/512 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + R Y +T I Y NA+PHIGHAY + DV+ RFHRL G D LF TGTDEHG+KI KA Sbjct: 25 QTRGVYYATTPIFYVNAEPHIGHAYTTTLVDVVTRFHRLKGDDTLFLTGTDEHGEKIQKA 84 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A AG++ + + D+ ++ F+D + L I+YD+FIRTTE RH + ++ + GDI Sbjct: 85 ADAAGLSPQAYTDRVAKKFQDTWNSLGIAYDEFIRTTEARHQAVVHEVLTRVYEAGDIIF 144 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180 G Y G Y + E YY D E+ G QH+ P+++ EE YFFR+ Y+ L Sbjct: 145 GEYGGLYCVGCERYYTDKELEGGK-----CPQHDIPLEYRSEENYFFRMERYRPWLRETL 199 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238 E +PE I P RNEV+S ++ + DLS+SR WGI +P D ++ YVW DAL NY Sbjct: 200 EENPELIRPERYRNEVLSILREPIGDLSISRPRSRVPWGIPLPWDENHVTYVWFDALINY 259 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 + D + ++WP H I KDIL+ H ++WP L SA LPL + + HG+ L Sbjct: 260 YSALKSRD----AVERYWPFVEHFIAKDILKPHGVFWPTMLKSAGLPLYRHLNVHGYWLV 315 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 G K+SKS GNV+ P+++ ++ G DA RY+L+R++ G D + + GL +R+NADLAN + Sbjct: 316 DGGKMSKSKGNVVRPLDLKDKYGNDAFRYYLLRDMTFGLDASFSEVGLAERINADLANDL 375 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNL++R++ M+ K G++P PG DE++ + + + E RA+ V+ Sbjct: 376 GNLLNRTLGMLGKYRGGVVPAPGPLEPIDEALRDAFVGLPERMTELFDALQFDRAIESVL 435 Query: 419 SLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V + ++Y +PW L K R TVLY VE +R +ILL +P A ++ L Sbjct: 436 EAVRKANKYIAETQPWVLAKEGAAGRLDTVLYGCVEALRCASILLSPVIPTKAAELQQQL 495 Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 + + + L P P+FPR Sbjct: 496 GLKGDYTLQDAATWGLTPAGTPTAPGAPLFPR 527 >gi|68073399|ref|XP_678614.1| methionine--tRNA ligase [Plasmodium berghei strain ANKA] gi|56499140|emb|CAH98022.1| methionine--tRNA ligase, putative [Plasmodium berghei] Length = 885 Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 188/478 (39%), Positives = 290/478 (60%), Gaps = 12/478 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + YI+TAI Y N +PH GHAYE+++AD LAR+HR G DV FTTG DEHG KIA A Sbjct: 219 KNDNFYITTAINYVNGEPH-GHAYEIVLADTLARYHRNLGRDVFFTTGADEHGLKIANQA 277 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 +T + D N F+ + L + D ++RTT H + +W K GDIY G Sbjct: 278 LRNNMTPQELCDLNVIKFKKLNKDLHTTEDYYVRTTADIHKKIAQSIWMKCVKNGDIYLG 337 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y GWY++R+E Y ++E Y + +N ++ M+E YFFR+S YQD+LL + Sbjct: 338 EYEGWYNVREETYIPENE---AKLMNYIDPLNNVKLEKMKEPSYFFRMSKYQDRLLQHIH 394 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +P+FI P + RNE++ +K L+DLS SR F WGI +P+DP+++MYVW+DAL NY + Sbjct: 395 DNPDFIQPEKNRNEILQRLKEPLEDLSCSRTKFSWGIPVPNDPKHVMYVWMDALINYYSN 454 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KG 300 +++ D K K+WPAD+H+IGKDI+ FHA+ +P L+S N+ LPK +FSHGF+L G Sbjct: 455 C-FIN--DQEKIKYWPADIHIIGKDIVWFHAVIFPTILMSINIELPKCIFSHGFVLAGDG 511 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKSL NVIDP E+IE G DA R+ +V+E G D +D D L N+DLA+ IGN Sbjct: 512 KKMSKSLKNVIDPKEIIESYGSDAFRFHVVKESKRGYDMRFDVDNLVDMCNSDLADTIGN 571 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 LV R++S+ + + IP + + D + I M+N +H+ + +++ Sbjct: 572 LVQRTLSLCMLSNNAKIPP--LYDDIDIEFPLCMLHFINRIEYYMKNFHVHKFCEKTVNV 629 Query: 421 VSEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +++++ PW+ K ++ ++ ++ + +E I +A + +P +A++IF+ L Sbjct: 630 CKDLNKFLTDLAPWKYKEESEKNKKLHIIRLMLESIYFIAHYIDIVIPMIASQIFNQL 687 >gi|94984831|ref|YP_604195.1| methionyl-tRNA synthetase [Deinococcus geothermalis DSM 11300] gi|94555112|gb|ABF45026.1| methionyl-tRNA synthetase [Deinococcus geothermalis DSM 11300] Length = 670 Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 201/490 (41%), Positives = 291/490 (59%), Gaps = 11/490 (2%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + +I+TAI Y N PHIGH YE I+AD LAR+HRL G DV F TGTDEHG+KIAKAA A Sbjct: 11 EFFITTAIDYANGAPHIGHVYEKILADALARYHRLAGYDVTFVTGTDEHGEKIAKAAAKA 70 Query: 66 GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G T + FVD S R F+ + D L+ISYDDFIRTTE RH + +++ D GDIY Y Sbjct: 71 GQTPQTFVDDLSLRAFKGLWDRLEISYDDFIRTTEGRHKRFVAEILQRVYDAGDIYFAEY 130 Query: 125 SGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 G YS+ E Y + E+ +G DG + Y +P + E YFFR+ YQD L ++ E + Sbjct: 131 EGLYSVGAERYVTEKELVEGPDGVRRYPGDKDPPELRREANYFFRMEKYQDWLRAHIEQN 190 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 P+FI P RNEV+ ++ + DLS+SR WGI++P DP ++ YVW DAL NY++ Sbjct: 191 PDFIQPAGYRNEVLEMLREPIGDLSISRPKSRVPWGIELPWDPDHVTYVWFDALLNYVSA 250 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-G 300 + + K W HVIGKDIL+ HA++WP L +A LP+ +K+ H IL + G Sbjct: 251 PVSRGLGEETIGKAW----HVIGKDILKPHAVFWPTMLRAAGLPIYRKLVVHSHILAEDG 306 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+ KSLGN IDP +++ E VDA+RY L+RE D Y + L R+N+DLAN +GN Sbjct: 307 RKMGKSLGNAIDPEQLVREYPVDAIRYTLLREATLSADSPYGEGILVSRLNSDLANDLGN 366 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+SR+VSMI K G++P E + + + + E+ +++ ++ A+ ++ Sbjct: 367 LLSRTVSMIQKYRGGVLPQALEVGEREREVEAKALALPSEVMTLVRDLKVNMAIETAMNF 426 Query: 421 VSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 V +++RY +PW L K+ R TVLY E +R ++ L+A +P A ++ L Sbjct: 427 VRDLNRYIAESQPWNLAKSEETARRLDTVLYTAAEGLRVASVALEAVIPGKARELRAQLG 486 Query: 479 VADENRCFQS 488 + ++ + Sbjct: 487 LGGQSYALRG 496 >gi|313679972|ref|YP_004057711.1| methionyl-tRNA synthetase [Oceanithermus profundus DSM 14977] gi|313152687|gb|ADR36538.1| methionyl-tRNA synthetase [Oceanithermus profundus DSM 14977] Length = 626 Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 191/469 (40%), Positives = 285/469 (60%), Gaps = 17/469 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ Y++T I Y NA+PHIGHAY I AD LAR+HRLDG D F TGTDEHG+KIA+AA+ Sbjct: 2 KKTFYVTTPIYYVNARPHIGHAYTTINADFLARWHRLDGYDTFFLTGTDEHGEKIAQAAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG + FVD+ + F+ +VL ISYDDFIRTTE RH + ++I D+GDIY G Sbjct: 62 RAGKPPQQFVDEVAEEFKKAWEVLHISYDDFIRTTEPRHKKVVQRYLQEIYDRGDIYYGE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G Y + E + + E+ DG+ + P + E YFF++ Y+ L + + H Sbjct: 122 YEGLYCVGCERFLTEKEL---VDGKCPDHGVEP-EPRREGNYFFKMEKYRTWLRGHIQKH 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 P F+ P RNEV++ + + DLS+SR WGI++P DP ++ YVW DAL NY++ Sbjct: 178 PGFVRPERYRNEVLAILSEPIGDLSISRPKSRVSWGIELPWDPDHVTYVWFDALLNYISA 237 Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY PDG + K+WPA H+IGKDIL+ HA++WP L + ++ + + + G +L G Sbjct: 238 LGY---PDGERFQKYWPAAQHMIGKDILKTHAVFWPTMLKAGDVAVYRHLNVGGHLLADG 294 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKSLGNVIDP E + G DA+RY+L++E G DG + GL +R NADLAN +GN Sbjct: 295 RKMSKSLGNVIDPFEWARKYGPDAVRYYLLKETPYGLDGAVSEAGLVERYNADLANDLGN 354 Query: 361 LVSRSVSMILKDYDGMI--PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 L+ R +M+LK G + PGA ++ ++ ++ ++R + ++AL +V+ Sbjct: 355 LLQRVRTMVLKYRQGRLRFQQPGA---AEHEVVEAAEALVPKVRGLVGELRFNQALEEVL 411 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 V ++RY + + PW++ + + VLY VE +R ++LL+ +P Sbjct: 412 QFVRSLNRYINERAPWKI--ADAEELDRVLYTAVEGMRVASVLLEPAMP 458 >gi|88808698|ref|ZP_01124208.1| methionine--tRNA ligase [Synechococcus sp. WH 7805] gi|88787686|gb|EAR18843.1| methionine--tRNA ligase [Synechococcus sp. WH 7805] Length = 525 Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 195/514 (37%), Positives = 284/514 (55%), Gaps = 22/514 (4%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y NA+PH+G Y I D LARF RL+G +V+F TG DEHGQKI + A+ ++ Sbjct: 16 LTTPLYYVNAKPHLGSVYTTIACDALARFQRLEGEEVVFITGVDEHGQKIQRTAEAQSIS 75 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 D+ S + D+ DI+ D F+RTT RH + +++ G I G GWY Sbjct: 76 PADHCDRISALYADLWARWDITNDRFVRTTSPRHRPLVQAFFQRCEAAGHIRTGHQEGWY 135 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + +D K D + P++W +EE FF LS +Q+++ S + P+FI Sbjct: 136 CVDCEEFKDDLADAKNPDCAIHR---KPLEWRDEENLFFCLSQFQERIESLI-ADPQFIA 191 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P RR E+ +FV GL+D S+SR WG+ +P + YVW DAL YLT LD Sbjct: 192 PSSRRREIENFVAGGLRDFSISRVNVSWGLPVPGHQGHTFYVWFDALLGYLT--ALLD-- 247 Query: 249 DGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 DG WP D+HVIGKDILRFHA+YWPA L+SA LP+PK+VF HGF+ +G+ Sbjct: 248 DGGPVDLDRLTDVGWPVDVHVIGKDILRFHAVYWPAMLMSAGLPVPKRVFGHGFLTREGQ 307 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+ K+LGNV+DP ++E G DA+R++L+R+I G+DG + + VN DLAN IGNL Sbjct: 308 KMGKALGNVLDPETLLERCGTDAVRWYLLRDIQFGEDGDFQQQRFMDLVNNDLANTIGNL 367 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R+ SM K +D +P A SD + R + +R+++ A V+ L Sbjct: 368 LNRTASMSRKWFDASLPPVSAAVRSDHPLKDTTERTIDRVRQSIPAFAFKDAAEAVLQLA 427 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTV---LYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 E + Y + Q PW L K P V LY +E R + +LLQ VP L+++I L Sbjct: 428 IEANGYLNEQAPWSLMK-QPGHEQKVGDDLYAVLECCRVIGLLLQPLVPGLSSRILAQLD 486 Query: 479 VADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 + + + +L+PG L K +P+ R Sbjct: 487 QSPSEKGWTHALSWGQLEPGASLSKP-EPVMQRL 519 >gi|13605910|gb|AAK32940.1|AF367354_1 AT3g55400/T22E16_60 [Arabidopsis thaliana] gi|22137164|gb|AAM91427.1| AT3g55400/T22E16_60 [Arabidopsis thaliana] Length = 616 Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 196/517 (37%), Positives = 290/517 (56%), Gaps = 14/517 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E E ++T + Y NA PH+G AY I AD +ARF RL G V+F TGTDEHG+KIA +A Sbjct: 67 EGETFVLTTPLYYVNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKIATSA 126 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G D S+++R + LDI+YD FIRTT+ +H + + ++ GDIY+ Sbjct: 127 AANGRNPPEHCDLISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIYRA 186 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y + E Y ++ + + P +E+ YFF LS YQ L Sbjct: 187 DYEGLYCVNCEEYKDEKGLL---ENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDILAQ 243 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY---L 239 +P F+ P R NEV S++KSGL+D S+SR DWGI +PDD + +YVW DAL Y L Sbjct: 244 NPRFVQPSYRLNEVQSWIKSGLRDFSISRALVDWGIPVPDDDKQTIYVWFDALLGYISAL 303 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T N + + + WPA LH+IGKDILRFHA+YWPA L+SA L LPK VF HGF+ Sbjct: 304 TEDNKQQNLETAVSFGWPASLHLIGKDILRFHAVYWPAMLMSAGLELPKMVFGHGFLTKD 363 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+ KSLGN ++P E++++ G DA+RYF +RE+ G DG Y +D K VNA LAN IG Sbjct: 364 GMKMGKSLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLANTIG 423 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL++R++ ++ K+ + + + +++++ R N +N + A V+ Sbjct: 424 NLLNRTLGLLKKNCESTLVVDSTVAAEGVPLKDTVEKLVEKARTNYENLSLSSACEAVLE 483 Query: 420 LVSEVDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 + + + Y D + PW L K + + A+ L + +EV+R +A+ L P L+ +I+ Sbjct: 484 IGNAGNTYMDQRAPWFLFKQGGVSAEEAAKDLVIILEVMRVIAVALSPVAPCLSLRIYSQ 543 Query: 477 L-FVADENRCFQSLDQR---LKPGFMLHKTFDPIFPR 509 L + D+ D + LK G ++ + P+F R Sbjct: 544 LGYTEDQFNSITWSDTKWGGLKGGQVMEQA-SPVFAR 579 >gi|294899809|ref|XP_002776754.1| Methionyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983] gi|239883955|gb|EER08570.1| Methionyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983] Length = 1046 Score = 356 bits (914), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 193/494 (39%), Positives = 297/494 (60%), Gaps = 22/494 (4%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 EK YI+TAI Y N HIGHAYE + AD LAR++R+ G DV F TGTDEHGQKIA+ A++ Sbjct: 162 EKYYITTAINYTNGWAHIGHAYEAVAADALARWNRVYGRDVEFCTGTDEHGQKIAQKAES 221 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G T + D + F+ + L IS D +IRTT++ H TC+ LW+ +S KGDIY Y Sbjct: 222 KGKTPQEICDIYASAFQALNQRLRISNDIYIRTTDEHHMKTCQKLWEIVSSKGDIYLDNY 281 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 +G+Y +R+E Y D E + Y + + P+ M EE YFFR+ YQ +L+ + +SH Sbjct: 282 TGYYLVREERYVTDAE---AKEWDYKDPSTGKPLTEMSEESYFFRMGRYQQRLVDHIKSH 338 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 P+FI P + R ++++ ++ L+DLS SR+TF WGI IP ++MYVW DALTNYL+ Sbjct: 339 PDFIKPEQYRQQILARLEEPLRDLSCSRRTFSWGIPIPGSDDHVMYVWFDALTNYLSAVN 398 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEK 302 LD+ K +WPA+ H+IGKDI+ FH + WP L+SA++PLP+ V HGFI +G+K Sbjct: 399 GLDS---DKPHYWPANAHIIGKDIIWFHCVIWPCMLMSADIPLPESVAVHGFIQDAEGKK 455 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNV+DP +V+++ VD +R++++ + G D + + NADL NG+GNLV Sbjct: 456 MSKSIGNVVDPHDVLDKFPVDTVRWYMLSDAPYGGDLKFSTAAMINTHNADLCNGLGNLV 515 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVISLV 421 +R++++ G +P F+ D + + ++ M+ Q I A + + Sbjct: 516 NRAIAL----SGGCVPE---FSVKDLEKPFDLRKTIDDLDATMRQQDAISEGCAIIRQVT 568 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA- 480 + + +PW++K R + ++ + +E + LA L F+P A+KIF+ L A Sbjct: 569 GATNEWITRVEPWKIKDDKEKRMA-IIRLLMESVYVLAHLWAPFIPMGADKIFEKLATAP 627 Query: 481 ----DENRCFQSLD 490 D + F++L+ Sbjct: 628 RPLKDLSETFENLE 641 >gi|156040341|ref|XP_001587157.1| hypothetical protein SS1G_12187 [Sclerotinia sclerotiorum 1980] gi|154696243|gb|EDN95981.1| hypothetical protein SS1G_12187 [Sclerotinia sclerotiorum 1980 UF-70] Length = 579 Score = 356 bits (913), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 187/530 (35%), Positives = 294/530 (55%), Gaps = 27/530 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ Y++T I Y NA PH+GH Y M++ADV R+ L G + TGTDEHG KI +AA Sbjct: 46 KKPYYVTTPIFYVNAAPHVGHLYTMVLADVFKRWQVLKGETAILCTGTDEHGMKIQRAAA 105 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG K F D + F+ +A +S D F+RTT++ H +T +W + ++ IY+ Sbjct: 106 QAGTLPKEFCDNGAETFKKLAQRAGLSNDHFVRTTDQDHKETVEYVWYMLKEREYIYESK 165 Query: 124 YSGWYSLRDEAYYNDDEVYKGAD---GQYYNAQHNP---VQWMEEEGYFFRLSAYQDKLL 177 + GWY + DE +Y + + K D G+ + A V+W E+ Y FRLSA++D+LL Sbjct: 166 HEGWYCVSDETFYPESVIEKRLDPFTGRTFIASQETGKEVEWTSEKNYHFRLSAFKDQLL 225 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235 +YE +P+F++P+ R +V++ V GL+DLS+SR + WGI++PDD +YVW+DAL Sbjct: 226 EFYERNPDFVVPLTRMKDVVNQVSKGLEDLSISRPSDRLSWGIRVPDDDSQTIYVWLDAL 285 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+T Y P A WPAD+ VIGKDI+RFH IYWPAFLL+ NL PK++ +H Sbjct: 286 VNYITKASYPWAPGNEAAGGWPADVQVIGKDIVRFHCIYWPAFLLALNLQPPKRILTHAH 345 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +K+SKS+GNV++P ++ GVD +RY+L+ + +D Y + + +R L Sbjct: 346 WTMDNQKMSKSVGNVVNPFFAMDRFGVDVMRYYLIHDGGIKEDSSYGNEYIVERYKKGLQ 405 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTE-------SDESILSVCSRVLQEIRENMQNQ 408 G+GNLVSR + + + A +E S +++ + V + + MQ Sbjct: 406 KGLGNLVSRLTRPKVWNVRSCV--EAAHSEGLHNSDISTNQQIALLNNVRPKANDKMQEL 463 Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS----TVLYVTVEVIRQLAILLQA 464 AL ++ V E ++Y + PW L K+ A + +Y + E IR + ILLQ Sbjct: 464 NPAAALHVIMDTVFETNKYLQEEAPWSLAKSEEPNAKEKLISAVYHSAEAIRIVGILLQP 523 Query: 465 FVPKLANKIFDILFVADENRCFQSLDQRLKPGF------MLHKTFDPIFP 508 ++P+ A+ + D++ V E R ++ P + + +D +FP Sbjct: 524 YMPEKASLLLDMIGVIPERRTYEYATLGADPSYGDAQVPLGKCAWDALFP 573 >gi|206889557|ref|YP_002248229.1| methionyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741495|gb|ACI20552.1| methionyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 642 Score = 356 bits (913), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 206/525 (39%), Positives = 304/525 (57%), Gaps = 26/525 (4%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + + YI+T I Y N PHIGHAY I AD+LAR+ RL G V F TGTDEHGQK+ + Sbjct: 1 MNQNKGFYITTPIYYVNDIPHIGHAYTTIAADILARYMRLKGRKVFFLTGTDEHGQKVER 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA G T K D NF+ + L+IS D FIRTT++ H + + +++ DKG+I Sbjct: 61 AALQKGKTPKEHADIMVENFKTLWKGLNISNDAFIRTTDEEHKRIVQEILQRLYDKGEIV 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K YSG Y E ++ + ++ +G+ + + V+++EEE YFF +S YQ L+ + Sbjct: 121 KRKYSGMYCTPCERFWTEKDL---VEGKCPDCGRD-VEFIEEENYFFLMSKYQQALIEHI 176 Query: 181 ESHPEFILPIERRNEVISFVKS-GLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237 E +P +ILP R+NEV+ F+K+ L DL +SR +WGI +P D Y YVW DAL N Sbjct: 177 EKNPSYILPETRKNEVLGFLKNRTLGDLCISRPKHRLEWGIILPFDENYTTYVWFDALVN 236 Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 Y + YL P+ ++WP D H+IGKDIL HA+YW L++ LPLP+ +F+HG+ Sbjct: 237 YYSALKYLA-PEN--VEWWPPDHHLIGKDILTTHAVYWSTMLMALELPLPRNIFAHGWWT 293 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 KG+K+SKSLGNV++P EVI++ GVDA RYFL RE++ G DG + ++ L +R+N DLAN Sbjct: 294 VKGKKMSKSLGNVVNPSEVIKKYGVDAFRYFLFREVSFGLDGDFSEEALIRRINNDLAND 353 Query: 358 IGNLVSRSVSMILKDYDG------MIPTPGAFTE--SDESILSVCSRVLQEIRENM---- 405 GNL++R + M K G +IP A SD LS +++EI + Sbjct: 354 FGNLLNRFLVMNEKYMKGAVKINSIIPRSEATRNLYSDNEFLSSFKSLIEEINNEILWDE 413 Query: 406 -QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 + +I + Q ISL + Y +PW++ K P+R +L+ IR + + L Sbjct: 414 FKFNIILEKIWQAISL---TNNYIAKTEPWKVLKEEPERLPLILFNIWNAIRIITVFLYP 470 Query: 465 FVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 F+P+ ANKI+ L + D ++ L L + + + +FP+ Sbjct: 471 FMPETANKIWYALGLRDYIIDYKMLKWELDIKEVKTEKIEQLFPK 515 >gi|317484604|ref|ZP_07943508.1| methionyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] gi|316924144|gb|EFV45326.1| methionyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] Length = 662 Score = 355 bits (912), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 193/476 (40%), Positives = 283/476 (59%), Gaps = 13/476 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I Y NA+PH+GHAY I+AD L RFH L G D F TGTDEHG KI KAA+ AG Sbjct: 5 FYITTPIYYVNARPHLGHAYTTIVADSLRRFHTLLGEDTWFLTGTDEHGDKIVKAAEAAG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + FVD S F+ + L I +D FIRTT+ H + +K+ D GDIY G + G Sbjct: 65 QTPQEFVDGISGQFQALWPKLGIKHDQFIRTTDADHKARVQAFLQKVYDNGDIYFGEHGG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y E +Y + E+ G Q+ +++E+ YFFR+S Y L + +P+F Sbjct: 125 HYCTGCERFYTEKELENGLCPQHLTKP----DFIQEKNYFFRMSKYLPWLAGHIRENPDF 180 Query: 187 ILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 I P RNEV+S ++SG L+DL +SR +WGI++P D Y+ YVW DAL NY++ G Sbjct: 181 IRPERYRNEVLSMIESGALEDLCISRPKNRLEWGIELPFDKDYVCYVWFDALLNYISALG 240 Query: 244 YLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 + PDG K A +WP + H++ KDIL+ H ++WP L SA +PL K + HG+ L K K Sbjct: 241 W---PDGDKYAAYWPGE-HLVAKDILKPHGVFWPTMLKSAGVPLYKHLNVHGYWLIKDTK 296 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKSLGNV++PI++ E G+DA RYFL+R++ G D + ++ L R NADLAN +GNL Sbjct: 297 MSKSLGNVVEPIKMAEHYGLDAFRYFLLRDMQFGSDASFSEEALITRFNADLANDLGNLF 356 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR +SM K ++ +P G E D++++ + + + N + L + LV Sbjct: 357 SRVLSMNAKYFESKVPPMGELAEDDKALIELAENSRRNYVQLFGNIRFSQGLDALWDLVR 416 Query: 423 EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +++Y D+Q PW L K+ + R TV+ + +E +R++A+ L +P A + + L Sbjct: 417 ALNKYVDSQAPWTLFKQGDTARLGTVIRLLLECMRKVALCLWPVMPGTAAALLEQL 472 >gi|226292612|gb|EEH48032.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18] Length = 552 Score = 355 bits (912), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 204/551 (37%), Positives = 304/551 (55%), Gaps = 52/551 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKA 61 +++ YI+T I Y NA PH+GH Y MI+ DVL R+ L G D TGTDEHG KI +A Sbjct: 9 DKKPFYITTPIFYVNAAPHVGHLYTMILGDVLKRWQILLGDTDAKLLTGTDEHGLKIQQA 68 Query: 62 AQNAGVTTKVFVDQNSRNFR-----------------DMADVLDISYDDFIRTTEKRHHD 104 A AG+ + DQN + F+ ++A ++++YD FIRTT+ +H D Sbjct: 69 AAVAGMAPQELCDQNCQTFKTPCEGTAARILWGDKFKNLARTVNVNYDHFIRTTDPQHKD 128 Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD---GQYYNAQ---HNPVQ 158 R W ++ +G IY + GWYS+ DEA+Y V D G+ A VQ Sbjct: 129 AVRYFWDMLNHRGYIYTAKHEGWYSVSDEAFYPPSAVQPILDPSTGRKIIASIETGKEVQ 188 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216 W EE Y FRLSA+++ LL +Y +HP FI P +++++ + +GL+DLS+SR +W Sbjct: 189 WTSEENYHFRLSAFKEPLLEHYRNHPNFITPKHYMDDMMNAISAGLQDLSISRPASRLNW 248 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276 GI +P D ++YVW+DAL NY+T GY PD WPAD+ V+GKDILRFH IYWP Sbjct: 249 GIPVPYDESQVIYVWLDALVNYITYAGYPFPPDAKS--IWPADVQVVGKDILRFHCIYWP 306 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 AFL++ LPLP+++ +H EK+SKS GNV++P IE GVD +R+FLV + A Sbjct: 307 AFLMALGLPLPRQIMAHAHWTINNEKMSKSTGNVVNPYFAIERFGVDTVRFFLVIDGAQV 366 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDE 388 D Y+ + +R L G+GNL SR + S ++ +G P TE + Sbjct: 367 SDSGYENSYIVERYKKGLQRGLGNLASRVLRGKKWIVRSSVVMAGEGRFPR----TEHQD 422 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 + S+ + R+ M+ +AL ++ ++ + ++YF KPW L +N ++V+ Sbjct: 423 FLESIPEKA----RDEMRQLDPRKALNSIMEIIIQTNKYFHQMKPWILAMSNVVMLNSVI 478 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFV--ADENRCFQS------LDQRLKPGFMLH 500 Y T E +R ILLQ F+P+ ++++ D+L V A E R F + LD + + H Sbjct: 479 YSTAESLRIAGILLQPFMPQKSSELLDMLGVARAAEKRNFDAAKFGRDLDYGVPLVDLKH 538 Query: 501 KTFDPIFPRFL 511 T +FP + Sbjct: 539 GTTGTLFPPLI 549 >gi|87124495|ref|ZP_01080344.1| methionyl-tRNA synthetase [Synechococcus sp. RS9917] gi|86168067|gb|EAQ69325.1| methionyl-tRNA synthetase [Synechococcus sp. RS9917] Length = 514 Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 184/478 (38%), Positives = 271/478 (56%), Gaps = 17/478 (3%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y N +PH+G Y I D LARF RL+G VLF TG DEHGQKI + A G+ Sbjct: 5 LTTPLYYVNDRPHLGSTYTTIACDALARFQRLEGETVLFVTGVDEHGQKIQRTAAEQGIE 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D+ + + + IS D F+RTTE RH + +++ GDI G +GWY Sbjct: 65 PREHCDRITARYLEAWRQWGISNDRFVRTTEPRHRPLVQAFFQRCEAAGDIRSGRQTGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + ++ K + P++W +EE FF LS +Q+++ + + P FI Sbjct: 125 CVGCEEFKDEPAEAKEPCCPLH---QKPLEWRDEENLFFCLSHFQERIETLI-NQPGFIA 180 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P RR E+ +FV GL+D S+SR WG+ +P + YVW DAL YLT LD Sbjct: 181 PASRRKEIQNFVAGGLRDFSISRVNVAWGLPVPGHEGHTFYVWFDALLGYLTA--LLD-- 236 Query: 249 DGS-------KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 DG A WPAD+ VIGKDILRFHA+YWPA L+SA LP+PK+VF HGF+ +G+ Sbjct: 237 DGGDVDLNRLGAAGWPADVQVIGKDILRFHAVYWPAMLMSAGLPVPKRVFGHGFLTREGQ 296 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+ KSLGNV+DP ++E G DA+R++L+R+I G DG + + VN DLAN IGNL Sbjct: 297 KMGKSLGNVLDPEVLLERCGADAVRWYLLRDIQFGDDGDFQQQRFTDLVNNDLANTIGNL 356 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R+ SM K ++ +P + + ++ + + ++ +R+ M +A ++SL Sbjct: 357 LNRTASMARKWFNDAVPPIDSTASAGHALQADAEQTIERVRQAMPELHFQQACEAILSLA 416 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + Y +AQ PW K + AS LY +E R + +LLQ VP L+ +I D L Sbjct: 417 IQANGYLNAQAPWRQMKQPGNEASVASDLYAVLECCRLVGLLLQPLVPDLSQRILDQL 474 >gi|148239464|ref|YP_001224851.1| methionyl-tRNA synthetase [Synechococcus sp. WH 7803] gi|147848003|emb|CAK23554.1| Methionyl-tRNA synthetase [Synechococcus sp. WH 7803] Length = 514 Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 192/513 (37%), Positives = 288/513 (56%), Gaps = 20/513 (3%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y NA+PH+G Y + D LARF RL+G DV+F TG DEHGQKI + A+ ++ Sbjct: 5 LTTPLYYVNAKPHLGSVYTTLACDALARFQRLEGQDVVFITGVDEHGQKIQRTAETQNIS 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 D+ S + D+ IS D F+RTT RH + +++ G I G GWY Sbjct: 65 PIDHCDRISALYSDLWTRWHISNDRFVRTTSPRHLPLVQAFFQRCEAAGHIRTGHQEGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + +D K D + P++W +EE FF LS +Q+++ + + P+FI Sbjct: 125 CVDCEEFKDDPADAKAPDCPIHR---KPLEWRDEENLFFCLSQFQERIETLI-ADPQFIA 180 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P RR E+ +FV GL+D S+SR WG+ +P P + YVW DAL YLT LD Sbjct: 181 PASRRREIENFVAGGLRDFSISRVNVSWGLPVPGHPGHTFYVWFDALLGYLT--ALLD-- 236 Query: 249 DGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 DG WPAD+HVIGKDILRFHA+YWPA L+SA LP+PK+VF HGF+ +G+ Sbjct: 237 DGGAVDLDRLADIGWPADVHVIGKDILRFHAVYWPAMLMSAGLPVPKRVFGHGFLTREGQ 296 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+ K+LGNV+DP ++E G DA+R++L+R+I G+DG + + VN DLAN IGNL Sbjct: 297 KMGKALGNVLDPEILLERCGTDAVRWYLLRDIQFGEDGDFQQQRFMDLVNNDLANTIGNL 356 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R+ SM K ++ +P S+ + + ++ +R+++ A V+ L Sbjct: 357 LNRTASMSRKWFEASLPPVSPDVRSEHPLKQPTEQTIERVRQSIPALAFQDAAEAVLQLA 416 Query: 422 SEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-F 478 E + Y + Q PW L K + ++ LY +E R + +LLQ VP L+++I L Sbjct: 417 IEANGYLNEQAPWSLMKQPGHEEKVGDDLYAVLECCRVIGLLLQPLVPGLSSRILAQLDQ 476 Query: 479 VADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510 ++ Q+L +L+PG L K +P+ R Sbjct: 477 RPSDDGWTQALRWGQLEPGVGLPKP-EPVMQRL 508 >gi|330718103|ref|ZP_08312703.1| methionyl-tRNA synthetase [Leuconostoc fallax KCTC 3537] Length = 625 Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 189/475 (39%), Positives = 287/475 (60%), Gaps = 15/475 (3%) Query: 49 TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108 TGTDEHG KI + AQ AG + ++D ++ +++ ++DISYD FIRTTE +H + Sbjct: 2 TGTDEHGLKIQQKAQAAGQSEIQYLDGMAKQIKELWSLMDISYDQFIRTTEPQHEAAVQN 61 Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEE 162 ++K++ D+GDIYKG Y GWYS+ DE Y+ + EVY +G+ + + V+ ++E Sbjct: 62 IFKQLLDQGDIYKGEYEGWYSVSDEEYFTESQLAEVYHDDNGKVIGGKAPSGHEVELVKE 121 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIP 221 E YFF++S Y D LL YY+ HP FI P R NE+IS F+ GL+DL+++R +FDWG+K+P Sbjct: 122 EAYFFKMSKYADWLLDYYKLHPNFIQPEARMNEMISNFIAPGLEDLAMTRTSFDWGVKVP 181 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281 D ++++YVWIDAL NY+T GY D ++WPA+ ++GK+I+RFH IYWP L + Sbjct: 182 GDEKHVIYVWIDALANYITALGYGSADDTLFQRYWPANAQLVGKEIVRFHTIYWPIILHA 241 Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGF 340 LPLPK V HG+++ K K+SKS GNVI P EV+E+ G+DA+RY+L+R + G DG Sbjct: 242 LGLPLPKSVIGHGWLVMKDGKMSKSKGNVIYP-EVLEQRYGLDAVRYYLLRAMPFGNDGV 300 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQ 399 + + RVN DLAN +GNL++R+++MI K +G+IP S DE ++ + + + Sbjct: 301 FTPEDFVSRVNFDLANDLGNLLNRTIAMINKYEEGIIPKLATGKTSFDEDLIRIINESMV 360 Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQ 457 ++ AL + +++ ++Y D +PW L K D S+V+ +R Sbjct: 361 TYHQHFNKLRTADALESIWTIIRRANKYIDETQPWVLAKDEARADELSSVMAHLAASLRV 420 Query: 458 LAILLQAFVPKLANKIFDIL---FVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 A+LLQ + + KIF+ L + + R L G + K PIFPR Sbjct: 421 TAVLLQPVLTQAPAKIFEQLGLDYPKEGVRIANLSFGGLPTGGKVVKKGQPIFPR 475 >gi|297820298|ref|XP_002878032.1| hypothetical protein ARALYDRAFT_906959 [Arabidopsis lyrata subsp. lyrata] gi|297323870|gb|EFH54291.1| hypothetical protein ARALYDRAFT_906959 [Arabidopsis lyrata subsp. lyrata] Length = 615 Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 194/511 (37%), Positives = 289/511 (56%), Gaps = 14/511 (2%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y NA PH+G AY I AD +ARF RL G V+F TGTDEHG+KIA +A G Sbjct: 72 LTTPLYYVNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKIATSAAANGRN 131 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 D S+++R + LDI+YD FIRTT+ +H + + ++ GDIY+ Y G Y Sbjct: 132 PPEHCDIISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIYRADYEGLY 191 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E Y ++ E+ + P +E+ YFF LS YQ L +P F+ Sbjct: 192 CVNCEEYKDEKELL---ENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDILAQNPRFVQ 248 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY---LTTTGYL 245 P R NEV S++KSGL+D S+SR DWGI +PDD + +YVW DAL Y LT Sbjct: 249 PSYRLNEVQSWIKSGLRDFSISRALVDWGIPVPDDDKQTIYVWFDALLGYISALTEDNKQ 308 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 N + + + WPA LH+IGKDILRFHA+YWPA L+SA L LPK VF HGF+ G K+ K Sbjct: 309 QNLETAVSLGWPASLHLIGKDILRFHAVYWPAMLMSAGLNLPKMVFGHGFLTKDGMKMGK 368 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGN ++P E++++ G DA+RYF +RE+ G DG Y +D K VNA LAN IGNL++R+ Sbjct: 369 SLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLANTIGNLLNRT 428 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 + ++ K+ + + + +++++ + N +N + A V+ + + + Sbjct: 429 LGLLKKNCESTLVEDSTVAAEGVPLKDTVEKLVEKAQTNYENLSLSSACEAVLEIGNAGN 488 Query: 426 RYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVAD 481 Y D + PW L K + + A+ L + +EV+R +A+ L P L+ +I+ L + D Sbjct: 489 TYMDQRAPWFLFKQGGVSAEEAAKDLVIILEVMRVIAVALSPIAPCLSLRIYSQLGYSVD 548 Query: 482 ENRCFQSLDQR---LKPGFMLHKTFDPIFPR 509 + D + LK G ++ + P+F R Sbjct: 549 QFNSITWSDTKWGGLKGGQVMEQA-SPVFAR 578 >gi|322378728|ref|ZP_08053158.1| methionyl-tRNA synthetase [Helicobacter suis HS1] gi|322380011|ref|ZP_08054276.1| methionyl-tRNA synthetase [Helicobacter suis HS5] gi|321147563|gb|EFX42198.1| methionyl-tRNA synthetase [Helicobacter suis HS5] gi|321148846|gb|EFX43316.1| methionyl-tRNA synthetase [Helicobacter suis HS1] Length = 632 Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 189/511 (36%), Positives = 292/511 (57%), Gaps = 29/511 (5%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 IST I Y N +PH+GHAY IAD+L +++ L G +V TGTDEHGQKIA++A ++ Sbjct: 23 ISTPIYYVNDKPHLGHAYTTFIADMLKKYYSLQGEEVFLLTGTDEHGQKIAQSALKHNLS 82 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + SR F++ D I Y+ F+RTT+ +H + + ++K+ KGDIYKG Y G Y Sbjct: 83 PLEYASNVSRLFKNQWDYFKIDYNHFVRTTDSQHKEAVQKAFEKMYQKGDIYKGMYQGSY 142 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYESH 183 + E++ H P +EEE YFF+LS YQD+LL +Y +H Sbjct: 143 CVSCESFVT--------------TTHCPDCNRESTLVEEESYFFKLSNYQDRLLDFYHTH 188 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLT 240 P+ I P+ RRNEV+ F++ GL DLS++R +F+WGI +P + ++++YVW+DAL NY++ Sbjct: 189 PKAIYPLFRRNEVLRFIEQGLYDLSITRTSFEWGIALPSSLKESKHVVYVWLDALLNYVS 248 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY G+ + + +HV+GKDILRFHAIYW AFL+S LPL +++ HG+ G Sbjct: 249 ALGY---GKGANLECFKHTIHVVGKDILRFHAIYWVAFLMSLELPLFERLCVHGWWTIDG 305 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKSLGNV+D ++ + G + LRYFL+RE+ G+DG + L +R NADL+N +GN Sbjct: 306 VKMSKSLGNVLDAQDLAKTYGTETLRYFLLREVPLGQDGDFSLQALIRRSNADLSNTLGN 365 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 LV R + M + + G + + G T + +L + ++MQ HR L + + Sbjct: 366 LVQRVLGMASQYFGGKLESEGVLTHY-AFLYQQLQDLLNSLDQSMQEMQPHRYLEDLWKI 424 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 + ++PW + KT P + +L + ++ + L +P+ A K+ I V Sbjct: 425 FEVCNATIAQEQPWNMVKTQPKKTMALLSLIATILAKSTFYLYPVMPESATKLAAIFGVN 484 Query: 481 DENRCFQSLDQR--LKPGFMLHKTFDPIFPR 509 ++ F + Q L P LHK + +FP+ Sbjct: 485 LNSQNFLTFKQSHYLLPPLTLHK-IEALFPK 514 >gi|301112046|ref|XP_002905102.1| methionyl-tRNA synthetase, putative [Phytophthora infestans T30-4] gi|262095432|gb|EEY53484.1| methionyl-tRNA synthetase, putative [Phytophthora infestans T30-4] Length = 463 Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 178/441 (40%), Positives = 275/441 (62%), Gaps = 20/441 (4%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + +++T I Y NA PHIGH + ++AD L+R+H++ G DVLFTTGTDEHG K+ +AA+ + Sbjct: 30 QTFVTTPIFYVNASPHIGHVHSAVLADALSRWHKVKGSDVLFTTGTDEHGLKVQEAAEKS 89 Query: 66 GVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G T K F D+ S F ++ V ++ Y FIRT+++ HH+ W+ I D G IY G + Sbjct: 90 GTTDYKAFCDEVSSRFNEIFQVANVDYSRFIRTSDEDHHEAVNAFWRTIRDNGYIYLGDH 149 Query: 125 SGWYSLRDEAYYNDDEVYKGADG-----QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 WY DE++ + +V D + +PV+ + EE Y FRLSA+QD+LL + Sbjct: 150 ESWYCKSDESFLTEMQVEDKEDAHGNVVKVSKESGHPVEMLREENYKFRLSAFQDRLLEW 209 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTN 237 +++P+ I+P R NEV + V GL+DLS+SR + W I +PDD ++ +YVW+DALTN Sbjct: 210 LDANPDVIVPKSRYNEVRAAVAGGLRDLSVSRLSEKIKWAIPVPDDDKHCVYVWLDALTN 269 Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 YLT+ GY G+ WPA H++GKDIL+FHAIYWPAFL++A LPLPK+V +H Sbjct: 270 YLTSAGY----PGAIDHAWPAAYHIVGKDILKFHAIYWPAFLMAAGLPLPKRVVAHAHWT 325 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 K+SKSLGNV+DP E++ + G D +R+FL+RE DG ++ + L+ R N++LA+ Sbjct: 326 VGNVKMSKSLGNVVDPHELLSKYGSDFVRFFLLREGVLTNDGDFNAEALEDRANSELADT 385 Query: 358 IGNLVSRSV--SMILKDYDGMIPTPGAF---TESDESILSVCSRVLQEIRENMQNQLIHR 412 GNLVSR ++++K G++P F T D+++++ + ++ + R Sbjct: 386 FGNLVSRCTGKAVLVK---GIVPKRPEFDRLTAEDKTLVAKGQALADKVEQLFDTPDFAR 442 Query: 413 ALAQVISLVSEVDRYFDAQKP 433 L +++ + +V+RYF +P Sbjct: 443 GLKEIVFFLHDVNRYFTIMEP 463 >gi|317969852|ref|ZP_07971242.1| methionyl-tRNA synthetase [Synechococcus sp. CB0205] Length = 522 Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 186/486 (38%), Positives = 272/486 (55%), Gaps = 11/486 (2%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y N +PH+G AY + D LARF RL G +VLF TG DEHGQKI + A+ AG+T Sbjct: 5 LTTPLYYVNDKPHLGSAYTTLACDALARFQRLKGEEVLFITGCDEHGQKIQRTAEAAGLT 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D S +R++ D IS + IRTT+ RH + + ++ GDI +G GWY Sbjct: 65 PQAHCDGVSAQYRELWDRWQISNNRLIRTTDPRHRQVVQQFFARVEASGDIVEGRQQGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + +D + + + P++W +E FFRLS YQ+++ + S P FI Sbjct: 125 CVACEEFKDDPHEAQDPECPIH---RKPLEWRDELNLFFRLSRYQEQIEALI-SQPGFIQ 180 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT---TGYL 245 P+ RR EV +FVK GL+D S+SR WGI +P + YVW DAL Y+T G Sbjct: 181 PVSRRREVENFVKQGLRDFSISRINLPWGIPVPGHEGHTFYVWFDALLGYITALLEEGDA 240 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + D + ++ WPA +HVIGKDILRFHA+YWPA LLSA L LP KVF HGF+ +G+K+ K Sbjct: 241 ADLDTAISRGWPASVHVIGKDILRFHAVYWPAMLLSAGLSLPAKVFGHGFLTREGQKMGK 300 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGNV+DP +++E G DA+R++L+R+I G+DG + + VN DLAN IGNL++R+ Sbjct: 301 SLGNVLDPADLLERCGRDAVRWYLLRDIPFGEDGDFQQQRFSDLVNNDLANTIGNLLNRT 360 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 SM + +D +P S + ++ ++N A + L + Sbjct: 361 SSMARRWFDEAVPPADQARTSTHPLAQAAAQAKDASLAALENLEFRSAAEAALQLAISAN 420 Query: 426 RYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFDILF--VAD 481 Y + Q PW L K R LY +E R +A+L+ +P L+ ++ L + D Sbjct: 421 GYLNDQAPWSLMKKEGTREQVANDLYAVLEAARLVALLMAPLLPDLSGRMLHQLGQPIPD 480 Query: 482 ENRCFQ 487 N Q Sbjct: 481 SNATAQ 486 >gi|237756467|ref|ZP_04585002.1| methionyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691368|gb|EEP60441.1| methionyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] Length = 559 Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 188/441 (42%), Positives = 272/441 (61%), Gaps = 13/441 (2%) Query: 72 FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLR 131 D+ F+++ L+ISYD FIRTT+ H + +++K + GDIY Y +Y + Sbjct: 1 LADKTHLAFKELWRKLNISYDRFIRTTDPDHIKAVQYIFQKCYENGDIYLSEYESYYCVG 60 Query: 132 DEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190 E + + E+ D Y H P + ++EE YFFRLS Y DKLL +YE +PEFI P Sbjct: 61 CEEFKTETEI---KDYDYKCPIHLKPCEKVKEESYFFRLSKYTDKLLEFYEKNPEFIQPD 117 Query: 191 ERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 R+NEV+SFVK GLKDLS+SRK WGI +P DP + +YVW DALTNYLT GY +N Sbjct: 118 FRKNEVVSFVKQGLKDLSVSRKRDRVAWGIPVPFDPSHTIYVWFDALTNYLTAVGYPENL 177 Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308 + +FWPAD+H++GKDILRFHA+YWPAFL+SA L +PKKVF+HG+ +G K+SKSLG Sbjct: 178 N----EFWPADVHIVGKDILRFHAVYWPAFLMSAGLEIPKKVFAHGWWTVEGHKMSKSLG 233 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 NV+DP + +E GVD LRYFL+RE+ G DG + K + R+N+DLAN +GNL+SRS++M Sbjct: 234 NVVDPFKAADEFGVDQLRYFLLREVPFGLDGDFSKSAVINRINSDLANDLGNLISRSLTM 293 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428 I K +G I P F E +E +V S+ L+ + +Q ++L +V + +++Y Sbjct: 294 IHKFQNGKIERPSIFKEIEEEYKNVYSKTLENYKNFIQRLEFSKSLEEVWQFIDWLNKYI 353 Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488 +PW+L K + + T LY V+ I + +L F+P+ K+ + L + + N + Sbjct: 354 VKVEPWKLNKEDKEYLKTTLYTLVDGIYTVVWMLNPFMPQ---KMAEALNMLNINEIKKD 410 Query: 489 LDQRLKPGFMLHKTFDPIFPR 509 + P + P+FPR Sbjct: 411 IKPYSFPAEIAINQVVPLFPR 431 >gi|320334699|ref|YP_004171410.1| methionyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] gi|319755988|gb|ADV67745.1| Methionyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] Length = 657 Score = 353 bits (906), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 197/479 (41%), Positives = 278/479 (58%), Gaps = 15/479 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ER++ +I+TAI Y N PHIGH +E I+ D +AR+HRL G DV F TGTDEHG+KIAK Sbjct: 1 MSERKEFFITTAIDYANGAPHIGHVFEKILTDAIARYHRLAGYDVTFLTGTDEHGEKIAK 60 Query: 61 AAQNAGVTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AA AG T + FVD S F+ + D L I YDDFIRTTE RH + + +++ D GDI Sbjct: 61 AAAKAGQTPQRFVDDLSLGAFKGLWDRLGIGYDDFIRTTEPRHKAYVQDVLQRVYDAGDI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 Y Y G YS+ E Y + E+ G P + E YFFR+ YQ L+ + Sbjct: 121 YYAEYEGLYSVGAERYVTEKELVNGV----LPGDSAPPEVRREANYFFRMEKYQAWLVQH 176 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTN 237 + HPEFI P RNEV+ ++ + DLS+SR WGI++P DP ++ YVW DAL N Sbjct: 177 LQEHPEFIQPSGYRNEVLEMLREPIGDLSISRPKSRVPWGIELPWDPDHVTYVWFDALLN 236 Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 Y + KA + HVIGKDIL+ HA++WP L +A L +++ H IL Sbjct: 237 YQSAPA-----SKGKAALFRHAWHVIGKDILKPHAVFWPTMLKAAGSDLYERLIVHAHIL 291 Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 + G K+ KSLGN IDP +++ G D +RY L+RE G D Y + L R+N+DLAN Sbjct: 292 AEDGRKMGKSLGNAIDPGALVDAYGADTVRYTLLRETTLGADSPYGEGILVSRLNSDLAN 351 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNL+SR+VSM+ K +G++P PG E + I + + + + +++ I+ AL Sbjct: 352 DLGNLLSRTVSMVQKYREGVVPAPGPRAEREAGIEASARALPERVLGLVRDLKINMALEA 411 Query: 417 VISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 V +++RY PW L K +R +TVLY VE +R ++LL+A +P A ++ Sbjct: 412 AFEFVRDLNRYIAESAPWALAKDPAQAERLNTVLYTAVEGLRVASVLLEAAIPTKAREL 470 >gi|148985860|ref|ZP_01818954.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] gi|147922006|gb|EDK73130.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] Length = 626 Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 185/481 (38%), Positives = 290/481 (60%), Gaps = 13/481 (2%) Query: 42 GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101 G DV + TG DEHGQKI + A+ AG+T + +VD + +++ +LDISYD FIRTT+ Sbjct: 2 GYDVFYLTGLDEHGQKIQQKAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDY 61 Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHN 155 H +++++ + DIY G YSGWYS+ DE ++ + EV++ G + Sbjct: 62 HEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGH 121 Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTF 214 V+W+ EE YF RLS YQD+L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF Sbjct: 122 EVEWVSEESYFLRLSKYQDRLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTF 181 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAI 273 WG+ +P +P++++YVWIDAL NY T GY + G+ KFW + H++GKDILRFH+I Sbjct: 182 TWGVPVPSNPKHVVYVWIDALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSI 241 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 YWP L+ ++ LP ++ +HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + Sbjct: 242 YWPILLMMLDVKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNL 301 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392 G DG + + R+N +LAN +GNL++R+VSMI K +DG IP TE D + Sbjct: 302 PVGSDGTFTPEDYVGRINYELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAE 361 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYV 450 V + + + +M+ RAL V +L+S ++Y D PW L K D+ ++V+ Sbjct: 362 VAEKSIADFHTHMEAVDYPRALEAVWTLISRTNKYIDETAPWVLDKDEALRDQLASVMSH 421 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPR 509 IR +A L++ F+ + + + L + +E ++L P + PIFPR Sbjct: 422 LAASIRVVAHLIEPFMMETSRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPR 480 Query: 510 F 510 Sbjct: 481 L 481 >gi|291295734|ref|YP_003507132.1| methionyl-tRNA synthetase [Meiothermus ruber DSM 1279] gi|290470693|gb|ADD28112.1| methionyl-tRNA synthetase [Meiothermus ruber DSM 1279] Length = 628 Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 197/482 (40%), Positives = 279/482 (57%), Gaps = 19/482 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y + AI Y NA PHIGH YE II D LARFHRLDG + F TGTDEHG+KIA+AA+NAG Sbjct: 5 FYETAAIDYANAAPHIGHVYEKIICDFLARFHRLDGYETNFVTGTDEHGEKIARAAKNAG 64 Query: 67 VTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + FVD S F+ L ISYDD+IRTT +RH + + +K+ + GDIY Y Sbjct: 65 QEPQAFVDYVSEQLFQPAYRRLLISYDDYIRTTSERHKRYVQEILRKVYEAGDIYYAEYE 124 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G YS+ E + + E+ G P +E YFFR+ Y+ L+ Y HP+ Sbjct: 125 GLYSVGSERFVTEKELVNGV----LPGDSEPPILRKEANYFFRMEKYRPWLIEYLSEHPD 180 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 I P RNEV+ +K + DLS+SR WGI IP D ++ YVW DAL Y ++ Sbjct: 181 LIQPQAYRNEVLEMLKEPIGDLSISRPKDRVPWGIPIPWDENHVTYVWFDALLAYASSLA 240 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEK 302 G KFWP HVIGKDIL+ HAI+WP L SA LP+ K++ HG IL G K Sbjct: 241 S----RGLFEKFWPHAWHVIGKDILKPHAIFWPTMLKSAGLPIYKRLVVHGHILAMDGRK 296 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 + KSLGN +DP+ ++++ GVDAL Y L+R+ G D + ++ + +R+N+DLAN +GNL+ Sbjct: 297 MGKSLGNAVDPLALLDKYGVDALHYALLRDTTLGSDSPFGEEVVAQRLNSDLANDLGNLL 356 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR +M+LK G+IP P + D + + ++R+ + IH AL +V+ V Sbjct: 357 SRVRTMLLKYCGGIIPAP---SSPDSEVARAGVALAGKVRKEVDALRIHLALEEVLQYVR 413 Query: 423 EVDRYFDAQKPWELKKTNPDRASTV---LYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 ++++ + KPWEL + +P R + LY VE +R ++LL+ +P A ++ L + Sbjct: 414 GLNKFINDVKPWELAR-DPGRQKELEDALYTAVEGLRIASVLLEPALPTKAKELRAALGL 472 Query: 480 AD 481 D Sbjct: 473 GD 474 >gi|111657212|ref|ZP_01407985.1| hypothetical protein SpneT_02001579 [Streptococcus pneumoniae TIGR4] Length = 626 Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 185/481 (38%), Positives = 290/481 (60%), Gaps = 13/481 (2%) Query: 42 GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101 G DV + TG DEHGQKI + A+ AG+T + +VD + +++ +LDISYD FIRTT+ Sbjct: 2 GYDVFYLTGLDEHGQKIQQKAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDY 61 Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHN 155 H +++++ + DIY G YSGWYS+ DE ++ + EV++ G + Sbjct: 62 HEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGH 121 Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTF 214 V+W+ EE YF RLS YQD+L+ ++++HPEFI P R NE++ +F++ GL+DL++SR TF Sbjct: 122 EVEWVSEESYFLRLSKYQDRLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTF 181 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAI 273 WG+ +P +P++++YVWIDAL NY T GY + G+ KFW + H++GKDILRFH+I Sbjct: 182 TWGVPVPSNPKHVVYVWIDALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSI 241 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 YWP L+ ++ LP ++ +HG+ + K K+SKS GNV+ P ++E G+D LRY+L+R + Sbjct: 242 YWPILLMMLDVKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNL 301 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392 G DG + + R+N +LAN +GNL++R+VSMI K +DG IP TE D + Sbjct: 302 PVGSDGTFTPEDYVGRINYELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAE 361 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYV 450 V + + + +M+ RAL V +L+S ++Y D PW L K D+ ++V+ Sbjct: 362 VAEQSIADFHTHMEAVDYPRALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSH 421 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPR 509 IR +A L++ F+ + + + L + +E ++L P + PIFPR Sbjct: 422 LAASIRVVAHLIEPFMMETSRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPR 480 Query: 510 F 510 Sbjct: 481 L 481 >gi|66808845|ref|XP_638145.1| methionyl-tRNA synthetase [Dictyostelium discoideum AX4] gi|74996820|sp|Q54MZ8|SYMM_DICDI RecName: Full=Probable methionyl-tRNA synthetase, mitochondrial; AltName: Full=Mitochondrial methionine--tRNA ligase; Short=MtMetRS; Flags: Precursor gi|60466665|gb|EAL64717.1| methionyl-tRNA synthetase [Dictyostelium discoideum AX4] Length = 575 Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 187/525 (35%), Positives = 291/525 (55%), Gaps = 32/525 (6%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++++K+ I+T I Y N PHIGH Y ++ D L R++R G D LF TGTDEHG K+ +A Sbjct: 40 EDKKKVLITTPIFYVNGPPHIGHLYSALLGDALGRWNRFIGNDTLFMTGTDEHGSKVDEA 99 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G+ T + D+ S FR++ D DI YDDFIRTTE RH + +W ++ ++G IYK Sbjct: 100 AKKNGLKTIDYCDKISNRFRELFDKADIKYDDFIRTTEPRHKEAVTAIWNRLLERGYIYK 159 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP--------------VQWMEEEGYFF 167 G Y GWY DE++ DD+V +G NP V W+EEE Y F Sbjct: 160 GVYKGWYCTSDESFLTDDQVTEGMSPI---TPQNPISKKCMISLESGHEVNWIEEENYMF 216 Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQ 225 +LS + + +++E + I P N + + G+KDLS+SR + WGI++P+DP Sbjct: 217 KLSEFSKTIENWFE-EVKPIFPAIHVNLLRYMLSQGIKDLSISRPSSRIPWGIEVPNDPS 275 Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285 +YVW+DALTNYLT TGY + S W H+IGKDI++FH++YWP+FL++A+ P Sbjct: 276 QTIYVWLDALTNYLTVTGYPNVSPNSSQSHWSNATHIIGKDIIKFHSVYWPSFLIAADYP 335 Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345 LPK + H EK+SKS GNV+DP I+ G++ +RYFL++ DG + + Sbjct: 336 LPKSIICHAHWTVNREKMSKSRGNVVDPFLAIDNHGLELIRYFLLKGGGLENDGDWSEHE 395 Query: 346 LKKRVNADLANGIGNLVSRSVSMILK---DYDGMIPTPGAFTESDESILSVCSRVLQEIR 402 L R +DLA+ GNL+SR L ++ + FT D+ ++ S +++ + Sbjct: 396 LAVRFKSDLADTYGNLISRCTGKALNPSGEWPKSVTDTSLFTMDDQKLIENSSILVKSVS 455 Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL----KKTNPD--RASTVLYVTVEVIR 456 + + ++++ + E + Y Q PW+L + D R +T++Y+ +E+IR Sbjct: 456 THYDRGDFKSGIFEIMTFLYECNLYVQNQAPWKLVPKPNRVGSDLIRLNTIIYIAIEMIR 515 Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501 ++LL +P +N + L + ENR S K G+ H+ Sbjct: 516 ITSLLLSPIIPTSSNLTLNYLSIPLENRSNPS---NFKFGYNYHQ 557 >gi|317177788|dbj|BAJ55577.1| methionyl-tRNA synthetase [Helicobacter pylori F16] Length = 647 Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 197/473 (41%), Positives = 292/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F+D D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + D +EEE YFFRLSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+N D A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNNLDNKMAHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E GV+ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKIAMEYGVEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNHSLKST-KITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + V+ Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANVLLQSSFLLYAFMPKSATKL 472 >gi|239905442|ref|YP_002952181.1| methionyl-tRNA synthetase [Desulfovibrio magneticus RS-1] gi|239795306|dbj|BAH74295.1| methionyl-tRNA synthetase [Desulfovibrio magneticus RS-1] Length = 651 Score = 352 bits (904), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 192/476 (40%), Positives = 278/476 (58%), Gaps = 10/476 (2%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + +I+T I Y NA+PH+GHAY I+AD LARFHRL G DV F TGTDEHG KIA+AA A Sbjct: 3 RFFITTPIYYVNAKPHLGHAYTTIVADALARFHRLCGEDVFFLTGTDEHGDKIAEAAAKA 62 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T K + D S F + L I+ FIRTT+ H D R + + DKGDIY G Y Sbjct: 63 GQTPKEYADAISGLFSSLWPDLGITPTRFIRTTDTDHIDAVRRALQLVYDKGDIYFGEYG 122 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y E + + E+ DG + + P ++ E+ YFFR+S YQ +LL + +++P+ Sbjct: 123 GHYCTGCERFLTEKEL---VDGLCPDHKVKP-DYIAEKNYFFRMSKYQGQLLEHIKANPD 178 Query: 186 FILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 FI P + RNEV+S ++SG L DL +SR WG+++P D ++ YVW DAL NYLT Sbjct: 179 FIRPRQYRNEVVSLLESGALDDLCISRPKSRLTWGVELPFDANFVTYVWFDALINYLTAV 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 G+ D PD +W A H++ KDIL+ HA++WP LL+ +LPL K + HG+ L + K Sbjct: 239 GWPDAPD--FGAWWGAAEHLVAKDILKPHAVFWPTMLLAMDLPLYKHLNVHGYWLVRDTK 296 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKSLGNV++P E+ G+ +RYFL+RE+ G D + ++G R NADLAN +GNL Sbjct: 297 MSKSLGNVVEPREMAGRAGLSGMRYFLLREMVFGADASFTEEGFVGRFNADLANDLGNLA 356 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 +R+++M K + ++P +D + + + + RAL + LV Sbjct: 357 NRTLAMTAKYFGSVLPAGQEADPADGELAQLAETAVANYLALFRQAQFSRALDALWELVR 416 Query: 423 EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++RY DA PW L K+ DR +TV+ + +R +A L +P+ A + L Sbjct: 417 GLNRYVDATAPWTLFKEGRTDRLATVMRSALGGLRTVAACLSPVMPEAAATLLTQL 472 >gi|260817050|ref|XP_002603400.1| hypothetical protein BRAFLDRAFT_80392 [Branchiostoma floridae] gi|229288719|gb|EEN59411.1| hypothetical protein BRAFLDRAFT_80392 [Branchiostoma floridae] Length = 531 Score = 352 bits (903), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 192/491 (39%), Positives = 278/491 (56%), Gaps = 28/491 (5%) Query: 20 PHIGHAYEMIIADVLARFHRLDGLD-VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSR 78 PH+GH Y ++AD + R+ +L G +F+TGTDEHG KI +AA G + F D SR Sbjct: 9 PHLGHLYSAVLADTIHRWQQLKGAGGSVFSTGTDEHGLKIQQAALAHGKDPQQFCDDVSR 68 Query: 79 NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138 +FRD+ + + DFIRTTE RH W+K+ G IY+G Y GWYS DEA+ D Sbjct: 69 HFRDLFSKSHVGHTDFIRTTESRHRKAVEHFWRKLQSAGYIYQGKYEGWYSTSDEAFVPD 128 Query: 139 DEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192 ++V + G D + + V+WM+EE Y FRLS + +LL + +S+P + P + Sbjct: 129 NKVMESVDKATGKDIKVSIETGSQVEWMKEENYMFRLSEFGPRLLEWLDSNPRAVYPDKY 188 Query: 193 RNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250 R V ++ GL+DLS+SR+ WGI +PDDP +YVW+DAL NYLT GY DN Sbjct: 189 RTLVRGWLGEGLEDLSVSRQRDRLPWGIPVPDDPTQTIYVWLDALVNYLTVCGYPDN--- 245 Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310 WPAD HV+GKDI+RFHA+YWPAFL++A L P+ V +H L + +K+SKS GNV Sbjct: 246 -HHAHWPADCHVVGKDIVRFHAVYWPAFLMAAGLDPPRSVVTHSHWLMESQKMSKSKGNV 304 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 +DP + I+ D LRYFL++ DG Y + + K +NADLA IG L++R ++ L Sbjct: 305 VDPFDRIQRYSADGLRYFLLKHGVLEADGDYSDEKVVKVLNADLAGNIGGLLNRCLATSL 364 Query: 371 KDYD-------GMIPT-PGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 M P PG TE D +L + + ++ +N I++ L + Sbjct: 365 NPTQTFPAFSANMFPVHPGTNSNTLATEEDYKLLKTLQELPGSVDQHYKNFHIYKVLEET 424 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + V + + + KPW+L T D+ AST+L+V +E +R ILLQ +P L + + Sbjct: 425 MLCVKQANGFVHRHKPWKLGNTPQDQEWASTILHVAMETLRVSGILLQPVMPDLMSGLLS 484 Query: 476 ILFVADENRCF 486 L V + R + Sbjct: 485 RLGVEETERSW 495 >gi|317182290|dbj|BAJ60074.1| methionyl-tRNA synthetase [Helicobacter pylori F57] Length = 653 Score = 352 bits (903), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 195/473 (41%), Positives = 292/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F+D D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + D +EEE YFFRLSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+N D A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNNLDNKMAHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 420 DFLNKFIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKL 472 >gi|297569842|ref|YP_003691186.1| methionyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] gi|296925757|gb|ADH86567.1| methionyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] Length = 510 Score = 352 bits (903), Expect = 8e-95, Method: Compositional matrix adjust. Identities = 194/507 (38%), Positives = 282/507 (55%), Gaps = 10/507 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 LY++T I Y NAQPH+GHAY ++AD ++RF+RLDG +V TGTDEHG KIA+AA AG Sbjct: 3 LYLTTPIFYVNAQPHLGHAYTAVVADTVSRFNRLDGREVFLQTGTDEHGDKIAQAAATAG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + +VD+ S FR L + D+FIRTT+ H + + +K+ D+GDIY Y G Sbjct: 63 TEARDYVDRISAMFRAAWPPLLVEPDNFIRTTDPHHVAVVQQILQKVYDRGDIYFSDYDG 122 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y E + + E+ G + A P Q + E+ YFF +S YQ L+ + +++PEF Sbjct: 123 LYCKGCERFLTEKELVDGKCPDHLTA---PEQ-VAEQNYFFAMSRYQQWLIDHIKANPEF 178 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P RNEV+SF+ L+DL +SR WGI +P D +++ YVW DAL NY++ GY Sbjct: 179 ITPERYRNEVLSFLSEPLEDLCISRPVSRLAWGIPLPFDQRFVTYVWFDALINYVSGIGY 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D PD A+ W H+I KDIL+ HAI+WP L + L +++ HG+ K+S Sbjct: 239 PDGPD--FARRWAGAEHLIAKDILKPHAIFWPTMLKAMGLEPYRRLHVHGYWNVGETKMS 296 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS+GNV+ P E++ G D +RYFL+RE++ G D Y + + R N+DLAN +GNL +R Sbjct: 297 KSIGNVVRPEEMVAAFGADTIRYFLLREMSFGLDSSYSDEAVLARRNSDLANDLGNLFAR 356 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 S++M+ D +P PG + D + +L E R MQ +AL V ++ Sbjct: 357 SLTMVKNFADSQVPAPGPLNDEDRELRDAALAMLAEYRRQMQAWSFRQALEAVWEVIGRA 416 Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 +RY PWEL K R +TVL +E +R + L+ +P A K+ L + E Sbjct: 417 NRYIVHNAPWELAKDPAQAQRLATVLNTLLETLRCITCALKPVMPAAAGKMSLALGLPPE 476 Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPR 509 R + L P + +FPR Sbjct: 477 GRLAEQQSWGLLPVGNTVTLGENMFPR 503 >gi|315638476|ref|ZP_07893653.1| methionine--tRNA ligase [Campylobacter upsaliensis JV21] gi|315481467|gb|EFU72094.1| methionine--tRNA ligase [Campylobacter upsaliensis JV21] Length = 626 Score = 352 bits (903), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 194/490 (39%), Positives = 298/490 (60%), Gaps = 41/490 (8%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PH+GHAY IIAD LARF+RL G LF TGTDEHGQKI +AA+N Sbjct: 3 YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLSGHKTLFLTGTDEHGQKIEQAAKNKNH 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + K + D+ S F+ + D +ISYD + RTT++RH + ++ K+ +KGDIYKG Y G+ Sbjct: 63 SPKEYADKISLEFKKLWDEFEISYDIYARTTDERHIKFVKQVFLKMWEKGDIYKGEYEGY 122 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYES 182 Y + E+++ Q N + P + ++EE YFFRLS Y+ +L +YES Sbjct: 123 YCVSCESFF--------TQSQLINQKCCPDCGKETRLLKEESYFFRLSKYEKDILKWYES 174 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYL 239 P I+P ++ E+++F+++GLKDLS++R +F+WGIKIP +D ++I+YVW+DAL Y+ Sbjct: 175 EP--IVPKNKKAELVNFIENGLKDLSITRTSFEWGIKIPSNLNDDKHIIYVWLDALFIYI 232 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 ++ + F PA +H++GKDILRFHAIY+PAFL+SA+LPLPK + +HG+ Sbjct: 233 SSLEL--DEKSENLGFLPAFVHLVGKDILRFHAIYFPAFLMSADLPLPKHIAAHGWWTRD 290 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 GEK+SKS GN + P + + G++A RYFL+RE+ G DG + + L R+NA+L+N G Sbjct: 291 GEKMSKSKGNALYPKIIADAYGLEAFRYFLLREVPFGNDGDFSETMLINRINAELSNEFG 350 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-------IHR 412 NL++R + M LK +G I + +L+ L+E ++QN L +R Sbjct: 351 NLLNRIIGMSLKYSNGNI--------LQDEVLNFYKAELKEANLHLQNALEFIENFQFNR 402 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 L ++ +S + +PW L K N +A+ ++ + ++ ++++LL +PK Sbjct: 403 YLEELFKALSVANLSISKYEPWNLIKANETSKANALVSLCANILARVSLLLHPALPKSTQ 462 Query: 472 KI-----FDI 476 K+ FDI Sbjct: 463 KVAKALSFDI 472 >gi|2266985|emb|CAA74281.1| MEtRS [Arabidopsis thaliana] Length = 616 Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 194/517 (37%), Positives = 290/517 (56%), Gaps = 14/517 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E E ++T + Y NA PH+G AY I AD ++RF RL G V+F TGTDEHG+KIA +A Sbjct: 67 EGETFVLTTPLYYVNAPPHMGSAYTTIAADSISRFQRLLGKKVIFITGTDEHGEKIATSA 126 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G D S+++R + LDI+YD FIRTT+ +H + + ++ GDIY+ Sbjct: 127 AANGRNPPEHCDLISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIYRA 186 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y + E Y ++ E+ + P +E+ YFF LS YQ L Sbjct: 187 DYEGLYCVNCEEYKDEKELL---ENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDILAQ 243 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY---L 239 +P F+ P R NEV S++KSGL+D S+SR D GI +PDD + +YVW DAL Y L Sbjct: 244 NPRFVQPSYRLNEVQSWIKSGLRDFSISRALVDXGIPVPDDDKQTIYVWFDALLGYISAL 303 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T N + + + WPA LH+IGKDILRFHA+YWPA L+SA L LPK VF HGF+ Sbjct: 304 TEDNKQQNLETAVSFGWPASLHLIGKDILRFHAVYWPAMLISAGLELPKMVFGHGFLTKD 363 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+ KSLGN ++P E++++ G DA+RYF +RE+ G DG Y +D K VNA LAN IG Sbjct: 364 GMKMGKSLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLANTIG 423 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL++R++ ++ K+ + + + +++++ R N +N + A V+ Sbjct: 424 NLLNRTLGLLKKNCESTLVVDSTVAAEGVPLKDTVEKLVEKARTNYENLSLSSACEAVLE 483 Query: 420 LVSEVDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 + + + Y D + PW L K + + A+ L + +EV+R +A+ L P L+ +++ Sbjct: 484 IGNAGNTYMDQRAPWFLFKQGGVSAEEAAKDLVIILEVMRVIAVALSPVAPCLSLRVYSQ 543 Query: 477 L-FVADENRCFQSLDQR---LKPGFMLHKTFDPIFPR 509 L + D+ D + LK G ++ + P+F R Sbjct: 544 LGYSEDQFNSITWSDTKWGGLKGGQVMEQA-SPVFAR 579 >gi|182415461|ref|YP_001820527.1| methionyl-tRNA synthetase [Opitutus terrae PB90-1] gi|177842675|gb|ACB76927.1| methionyl-tRNA synthetase [Opitutus terrae PB90-1] Length = 517 Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 189/480 (39%), Positives = 282/480 (58%), Gaps = 18/480 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+TAI Y N PH+GHAYE ++ DV+ARF R G V F TGTDEHGQK+ +A+ Sbjct: 2 KSFYITTAIDYVNGSPHLGHAYEKVLTDVIARFRRQMGDRVHFLTGTDEHGQKVQASARK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + F DQ S FR + L+IS DDFIRTTE+RH R + +++ DKG+IYK Y Sbjct: 62 LGIPPQQFADQVSAEFRALLPKLNISNDDFIRTTEERHKRVVRDVLQRLFDKGEIYKAEY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G+YS R E + D + + DG + V + E YFF+L AYQD L+ Y H Sbjct: 122 KGFYSTRQEQFLQDKD--RNPDGSWPEI-FGEVTEITESNYFFKLRAYQDWLIEYLTQHE 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLS--RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 +F+ P R+ +V+ F+K L DL +S R+ +WGI +P D Y+ YVW DAL NY + Sbjct: 179 DFVFPRYRQKQVLEFLKEPLNDLCISRPRERLEWGISLPFDEGYVTYVWFDALLNYYSAV 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDIL-RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 +D P WPA HVIGKDIL HA+YWP L +A + LP+ + +HG+ L +G Sbjct: 239 --VDKPGT-----WPA-YHVIGKDILVPPHAVYWPIMLQAAGIELPRGIIAHGWWLQRGA 290 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GN ++P++++ E G DA RYFL+RE+ G+D + ++ R N++LAN +GNL Sbjct: 291 KMSKSTGNALNPLDLVGEFGADAFRYFLMREMNVGQDSDFTREQFLVRYNSELANNLGNL 350 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 V+R+++M + G++P P A +++ + ++ + E + H AL + ++ V Sbjct: 351 VNRTLNMTTRFAGGVLPAPEAGDDTERELRALWDKTRDECLPLNEEFQFHTALERAMTFV 410 Query: 422 SEVDRYFDAQKPWELKKTNP--DRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + Y + + PW+L K+ D+A T L E +R +Q +P A KI +L Sbjct: 411 TATNAYIEKRAPWKLGKSAEPHDQALLRTSLATMAEALRLAVASVQHVIPAAAEKINGVL 470 >gi|325092268|gb|EGC45578.1| methionine-tRNA synthetase [Ajellomyces capsulatus H88] Length = 586 Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 192/509 (37%), Positives = 283/509 (55%), Gaps = 43/509 (8%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKA 61 +++ Y++T I Y NA PH+GH Y MI+ADVL R+ L G D TGTDEHG KI +A Sbjct: 52 DKKPFYVTTPIFYVNAAPHVGHLYTMILADVLKRWQILLGNTDAKLLTGTDEHGLKIQQA 111 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A G+T + DQN + F+++A ++ YD FIRTT+ H + R W ++ +G IY Sbjct: 112 AAALGMTPQALCDQNCKTFQNLARKGNVGYDHFIRTTDAEHKEAVRYFWDMLNHRGYIYT 171 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDK 175 + GWYS+ DEA+Y V D VQW EE Y FRLSA+Q+ Sbjct: 172 SKHEGWYSVSDEAFYPPSAVQPTLDPSTGRKIITSIETGKEVQWASEENYHFRLSAFQEP 231 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233 LL ++ +P+F+ P + ++S V SGL+DLS+SR WGI +P D ++YVW+D Sbjct: 232 LLEHFRKNPDFVTPRNYMDGIVSAVTSGLQDLSISRPASRLKWGIPVPYDESQVIYVWLD 291 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NY+T GY P G+++ WPAD+ V+GKDILRFH IYWPAFL++ LPLP+++ +H Sbjct: 292 ALVNYITYAGY-PFPPGAQS-IWPADVQVVGKDILRFHCIYWPAFLMAVGLPLPRRILAH 349 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G EK+SKS GNV++P +E GVDA+R++L + A D Y+ + +R Sbjct: 350 GHWTINHEKMSKSTGNVVNPHFAMERFGVDAMRFYLTIDGAQTSDSDYENSYIVERYKKG 409 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE------------I 401 L GIGNL SR +L+ ++ D +L+ R+ ++ + Sbjct: 410 LQWGIGNLASR----LLRGKK--------WSVRDSVVLAAQGRLARDKHHELLEAMPGRV 457 Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--------STVLYVTVE 453 + M+ RAL ++ ++ + ++YF +PW L + S+ LY T E Sbjct: 458 KAEMEQLDPRRALNSIMEIIHQTNKYFHDMQPWSLVNSQTQPQTQPQNPTLSSALYTTAE 517 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADE 482 +R ILLQ F+P A ++ D+L VA E Sbjct: 518 SLRITGILLQPFMPHKAAELLDMLGVARE 546 >gi|242808514|ref|XP_002485180.1| methionyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC 10500] gi|218715805|gb|EED15227.1| methionyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC 10500] Length = 578 Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 188/493 (38%), Positives = 267/493 (54%), Gaps = 21/493 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAA 62 ++ Y++T I Y NA PH+GH Y M++ DV+ R+ +L G D +F TGTDEHG KI +AA Sbjct: 50 QKPFYVTTPIFYVNAAPHVGHLYSMVLGDVIKRWEQLKGNKDAIFLTGTDEHGIKIQQAA 109 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 Q AG+ T+ F D N + F+D+A +IS D FIRTT++ H D R W+ + +G IY Sbjct: 110 QEAGMDTQAFCDMNCKTFKDLARAANISNDHFIRTTDEAHKDAVRYFWEMLQHRGYIYTK 169 Query: 123 CYSGWYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 + GWYS+ DEA+Y +V G V+W E Y FRLSA++D+L Sbjct: 170 KHEGWYSVSDEAFYPQSQVEPSLDPATGRKRMVSTETGKEVEWSSETNYHFRLSAFRDRL 229 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDA 234 L +YE +P+FIL V V+ GL+DLS+SR + WG+++P D +YVW+DA Sbjct: 230 LEFYELNPKFILSKSHMMNVKQAVEEGLQDLSVSRPVERLTWGVRVPGDDSQTIYVWLDA 289 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L NYLT GY P WPADLH++GKDI+RFH IYWPAFL++ +LPLP+ V HG Sbjct: 290 LINYLTKAGYPFTPGKESDLGWPADLHIVGKDIIRFHCIYWPAFLMALDLPLPRHVLVHG 349 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 K+SKS GNV++P I+ VD +R+FL G D YD + L Sbjct: 350 HWTMNKAKMSKSTGNVVNPFFAIDRFSVDIMRFFLTLRGPLGDDSNYDNSNIVNDYKKYL 409 Query: 355 ANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 G+GN+ R + + I G P + E L ++++ NM+ Sbjct: 410 QYGVGNVYQRLMGLTKMQLRPSIEAARSGFTTEPNEYDIEFEQYLHTFPKIVE---RNME 466 Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466 AL +++ + YF PW+ K + R V Y E +R ILLQ FV Sbjct: 467 AFHSKAALREIVDATMKAQNYFHHSAPWQ-HKDDLSRCYRVFYNVSEYLRIAGILLQPFV 525 Query: 467 PKLANKIFDILFV 479 P+ A+++ D + V Sbjct: 526 PQKASEVLDRIGV 538 >gi|57242363|ref|ZP_00370302.1| methionyl-tRNA synthetase [Campylobacter upsaliensis RM3195] gi|57017043|gb|EAL53825.1| methionyl-tRNA synthetase [Campylobacter upsaliensis RM3195] Length = 626 Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 190/485 (39%), Positives = 295/485 (60%), Gaps = 31/485 (6%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PH+GHAY IIAD LARF+RL G LF TGTDEHGQKI +AA+N Sbjct: 3 YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLSGHKTLFLTGTDEHGQKIEQAAKNKNY 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + K + D+ S F+ + D +ISYD + RTT++RH + ++ K+ +KGDIYKG Y G+ Sbjct: 63 SPKEYADKISLEFKKLWDEFEISYDIYARTTDERHIKFVKQVFLKMWEKGDIYKGEYEGY 122 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E+++ ++ + + ++EE YFFRLS Y+ +L +YES P I Sbjct: 123 YCVSCESFFTQSQLISQCGCPDCGKE---TKLLKEESYFFRLSKYEKNILKWYESEP--I 177 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244 +P ++ E+++F+++GLKDLS++R +F+WGIKIP +D ++++YVW+DAL Y+++ Sbjct: 178 VPKNKKAELVNFIENGLKDLSITRTSFEWGIKIPSNLNDDKHVIYVWLDALFIYISSLEL 237 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + F PA +H++GKDILRFHAIY+PAFL+SA+LPLPK + +HG+ G+K+S Sbjct: 238 --DEKSENLGFLPAFVHLVGKDILRFHAIYFPAFLMSADLPLPKYIAAHGWWTRDGKKMS 295 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GN I P + + G++ RYFL+RE+ G DG + + L R+NA+L+N GNL+SR Sbjct: 296 KSKGNAIHPKIIADAYGLEVFRYFLLREVPFGNDGDFSETMLINRINAELSNEFGNLLSR 355 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-------IHRALAQV 417 + M LK +G I +L+ L+E ++QN L +R L ++ Sbjct: 356 IIGMSLKYSNGEI--------LQNEVLNFYKAELKEANLHLQNALEFIENFQFNRYLEEL 407 Query: 418 ISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI--- 473 +S + +PW L K N +A+ ++ + ++ ++++LL +PK K+ Sbjct: 408 FKALSVANLSISKYEPWNLIKANETSKANALVSLCANILAKVSLLLHPALPKSTQKVAKA 467 Query: 474 --FDI 476 FDI Sbjct: 468 LSFDI 472 >gi|283850590|ref|ZP_06367878.1| methionyl-tRNA synthetase [Desulfovibrio sp. FW1012B] gi|283574161|gb|EFC22133.1| methionyl-tRNA synthetase [Desulfovibrio sp. FW1012B] Length = 650 Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 196/477 (41%), Positives = 286/477 (59%), Gaps = 18/477 (3%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + +I+T I Y NA+PH+GHAY +AD LARFH L G DV F TGTDEHG KIA+AA+ A Sbjct: 3 RFFITTPIYYVNAKPHLGHAYTTTVADSLARFHALLGEDVYFLTGTDEHGDKIAEAAKAA 62 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T K + D S F + L I+ FIRTT+ H + R +++ DKGDIY G Y Sbjct: 63 GQTPKEYADAISGLFSSLWPRLGITPSRFIRTTDADHKEAVRRALQQVYDKGDIYFGEYG 122 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y E + D E+ DG + + P +++ E+ YFFR+S YQ LL + ++P+ Sbjct: 123 GHYCKGCERFLTDKEL---VDGLCPDHKVKP-EYIAEKNYFFRMSKYQGALLDHIRANPD 178 Query: 186 FILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 FI P + RNEV+S ++SG L+DL +SR WGI++P D ++ YVW DAL NYLT Sbjct: 179 FIRPRQYRNEVVSLLESGALEDLCISRPKSRLTWGIELPFDANFVTYVWFDALINYLTAI 238 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 G+ D PD S ++W A H++ KDIL+ HAI+WP LL+ +LPL K++ HG+ L + K Sbjct: 239 GWPDAPDFS--QWWGAAEHLVAKDILKPHAIFWPTMLLAMDLPLYKRLNVHGYWLVRDTK 296 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKSLGNV++P+++ + G+ +RYF +RE+ G D Y + R NADLAN +GNL Sbjct: 297 MSKSLGNVVEPLDMAAKAGLSGMRYFFLREMVFGSDASYSDEAFIGRFNADLANDLGNLA 356 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN----MQNQLIHRALAQVI 418 +R+++M K + ++P A TESD + + SR+ + +N RAL + Sbjct: 357 NRTLAMTAKYFGSVVP---AATESDPADGEL-SRLALDATQNFVALFGAAQFSRALKALW 412 Query: 419 SLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 LV +++Y DA PW L K+ +R TV+ + +R+ A L +P+ A K+ Sbjct: 413 ELVRGLNKYVDAMAPWTLFKEGRTERLGTVMATALGGLRRAAACLLPVMPEAAEKLL 469 >gi|255936271|ref|XP_002559162.1| Pc13g07310 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583782|emb|CAP91800.1| Pc13g07310 [Penicillium chrysogenum Wisconsin 54-1255] Length = 570 Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 191/492 (38%), Positives = 269/492 (54%), Gaps = 20/492 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAK 60 + + Y++T I Y NA PH+GH Y M+IAD++ R+ L G D TGTDEHG KI + Sbjct: 47 RSNKPYYVTTPIFYVNAAPHVGHLYTMVIADIMKRWQVLLGNTDAQLLTGTDEHGMKIQQ 106 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA AG+ T+ F D N R F +A +I D FIRTT+ H D + W+ + +G IY Sbjct: 107 AAIQAGMDTQAFCDMNCRTFEALAKAANIDNDHFIRTTDPAHRDAVQYFWEMLQHRGYIY 166 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH------NPVQWMEEEGYFFRLSAYQD 174 + GWYS+ DE +Y +V D + V+W E Y FRLSA++D Sbjct: 167 TSRHEGWYSVSDETFYPQTQVQNSLDPSTGRKRMVSIETGKEVEWSSETNYHFRLSAFKD 226 Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWI 232 +LL Y+ FI P VI+ V++GL+DLS+SR T WGI +P D +YVW+ Sbjct: 227 RLLDLYKREDPFISPTSYTAAVINGVETGLQDLSISRPTERLTWGIPVPGDDTQTIYVWL 286 Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 DAL NYLT GY P WPADLHV+GKDI+RFH +YWPAFL++ +LPLP+ V Sbjct: 287 DALVNYLTKAGYPFPPGQENTSAWPADLHVVGKDIVRFHCVYWPAFLMALDLPLPRNVLV 346 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG EK+SKS GNV++P IE GVD +R+FL D +D + + Sbjct: 347 HGHWTMNHEKMSKSTGNVVNPFFAIERFGVDGMRFFLAYRGGLADDADFDNSFIIRDYKK 406 Query: 353 DLANGIGNLVSRSVSMI---LKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 L GIGNL R++ L+ Y D + A T D + + ++ E M+N Sbjct: 407 LLQGGIGNLALRTIGCARGNLRSYIMDALSNKLPAATPEDLDHQKMLEQTPPKVAEFMEN 466 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 AL + +S++ + ++YF A +PW KT+ RA +Y E +R ILLQ F+P Sbjct: 467 LNPRAALQETMSIIEKTNKYFHAAEPW---KTSNSRA---IYNVAESLRIAGILLQPFMP 520 Query: 468 KLANKIFDILFV 479 ++ + ++L V Sbjct: 521 GKSHDLLELLCV 532 >gi|123507933|ref|XP_001329523.1| hypothetical protein [Trichomonas vaginalis G3] gi|121912479|gb|EAY17300.1| hypothetical protein TVAG_266630 [Trichomonas vaginalis G3] Length = 710 Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 185/513 (36%), Positives = 297/513 (57%), Gaps = 12/513 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + + ++T I Y N PHIGH + + + ++ +++L G+D +++TGTDEHG K+ A Sbjct: 197 EKPMCLTTPIYYVNGVPHIGHVFTTTLVETISNWYKLRGIDCIYSTGTDEHGLKVQTTAA 256 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 + G K + D+ S+ F D + D+ D FIRTT++ H LW + +KG IY+G Sbjct: 257 SKGFLPKEWCDKTSKTFFDAFEQFDLHPDVFIRTTDENHIKVATKLWTILHEKGYIYEGK 316 Query: 124 YSGWYSLRDEAYYNDDE----VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 Y GWYS R+E + +++ V G + + ++W E + F+LSA Q +LL + Sbjct: 317 YEGWYSKREECFVPENQIKVVVENGVEKHINSEDGAELEWSSETNWMFKLSAMQQQLLDW 376 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 Y+++P I P N + V GL DLS+SR+ WGI +P+DP+ MYVWIDAL NYL Sbjct: 377 YDANPTCITPRPYYNLIKLMVSRGLNDLSVSRQNVTWGIPVPNDPKQTMYVWIDALANYL 436 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T G+ + +G+ + WP D+H +GKDI++FHAIYWPAFL++A +P K++ HG+ Sbjct: 437 TVAGW--DGEGNFGR-WPCDIHTVGKDIVKFHAIYWPAFLIAAGIPCYKRLLVHGWWTKN 493 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 EK+SKSLGN +DPI +++ G++A++Y+L+RE D Y + R N DLA+ + Sbjct: 494 EEKMSKSLGNTLDPIVLMKFWGLEAVKYYLLRECTLVSDSDYSDKAMLNRYNNDLADVLW 553 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLV R +S L D ++PTPG + E D+ ++ + + M AL + + Sbjct: 554 NLVIRIISKKLCP-DMVVPTPGEYQEVDKDLIESIVTIPGTVDHFMAFGETRHALDSIFA 612 Query: 420 LVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 + ++++Y +PW+L K+T+ R +TV Y +E +R LA L F+P+ A I + L Sbjct: 613 SIHDLNKYLTDMQPWKLVKETDLSRYNTVFYTLLECLRILATSLYCFMPQTATTILNGLG 672 Query: 479 VADENRCFQSLDQR--LKPGFMLHKTFDPIFPR 509 V +N + + + LKPG L + +FP+ Sbjct: 673 VG-KNFPPEEIFKYGFLKPGTKLMEGMPILFPK 704 >gi|308063822|gb|ADO05709.1| methionyl-tRNA synthetase [Helicobacter pylori Sat464] Length = 650 Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 195/473 (41%), Positives = 291/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F+D D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + D +EEE YFFRLSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+ D A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNGLDNKMAHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + V+ Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANVLLQSSFLLYAFMPKSAAKL 472 >gi|121706923|ref|XP_001271676.1| methionine-tRNA synthetase [Aspergillus clavatus NRRL 1] gi|119399824|gb|EAW10250.1| methionine-tRNA synthetase [Aspergillus clavatus NRRL 1] Length = 574 Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 189/491 (38%), Positives = 271/491 (55%), Gaps = 19/491 (3%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKA 61 ++ Y++T I Y NA PH+GH Y M+IAD+L R+ L G + TGTDEHG KI +A Sbjct: 51 SKKPYYVTTPIFYVNAAPHVGHFYTMVIADILKRWQVLLGNKNAQLLTGTDEHGMKIQQA 110 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A AG+ T+ F D N + F +A +I D FIRTT+ H + + W+ ++ +G IY Sbjct: 111 ALAAGMDTQAFCDMNCKTFEALAKAANIDNDHFIRTTDPAHKEAVQYFWEILNHRGYIYT 170 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQ------YYNAQHNPVQWMEEEGYFFRLSAYQDK 175 + GWYS+ DE +Y +V D V+W E Y FRLSA+QD+ Sbjct: 171 SKHEGWYSVSDETFYPPTQVQNSLDPSTGRKRMVSTETGKEVEWSSETNYHFRLSAFQDR 230 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWID 233 LL +Y S +FI P + +++ V SGL DLS+SR + WGI +P D +YVW+D Sbjct: 231 LLEFYSST-DFIAPGNYKTDIVKSVSSGLSDLSISRPVERLTWGIPVPGDETQTIYVWLD 289 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NYLT GY P WPAD+HV+GKDI+RFH +YWPAFL++ +LPLP++V H Sbjct: 290 ALVNYLTRAGYPFVPGQESRLGWPADVHVVGKDIVRFHCVYWPAFLMALDLPLPRRVLVH 349 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G EK+SKS GNV++P I+ GVD +R+FL + D YD + + Sbjct: 350 GHWTMNREKMSKSTGNVVNPFFAIDRFGVDTMRFFLAYQGGLVGDADYDNSFIIRDYKKM 409 Query: 354 LANGIGNLVSRSVSMI---LKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408 L GIGNL R++ L+ Y D T +D+ S+ ++ E M+ Sbjct: 410 LQWGIGNLAHRTIGCAKGKLRSYIQDAAADKLPPATPADQEHQSLLEHTPGKVAEQMEKL 469 Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468 AL +++++ ++YF A +PW +NP + VLY E +R ILLQ F+P Sbjct: 470 NPRAALQDIMTIIERTNKYFHAAEPW----SNPAESQRVLYNVAESLRISGILLQPFMPS 525 Query: 469 LANKIFDILFV 479 +N++ DIL V Sbjct: 526 KSNELLDILRV 536 >gi|168023212|ref|XP_001764132.1| predicted protein [Physcomitrella patens subsp. patens] gi|162684572|gb|EDQ70973.1| predicted protein [Physcomitrella patens subsp. patens] Length = 640 Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 185/480 (38%), Positives = 277/480 (57%), Gaps = 17/480 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E+ ++T + Y NA PH+G AY I AD LARF RL G DV F TGTDEHG+KIA AA Sbjct: 86 ERFTVTTPLYYVNAAPHMGSAYPTIAADALARFQRLQGRDVNFITGTDEHGEKIALAAAA 145 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G K D + ++ + L I+YD FIRTT+ H +K++ KGDIY+ Y Sbjct: 146 KGRAPKEHCDAVAAEYQLLWKELGIAYDKFIRTTDSHHETLVDEFYKRVEAKGDIYQAKY 205 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + E Y ++DE+ + + P + E+ YFF LS YQ L S+P Sbjct: 206 EGLYCVNCEEYKDEDELIEDLCCPIH---RKPCEARNEDNYFFALSKYQQPLEELLSSNP 262 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 F+ P R NEV +VK GL+D S+SR +WGI +P +P+ +YVW DAL Y++ Sbjct: 263 NFVRPSFRMNEVQGWVKEGLRDFSISRAAVEWGIPVPTNPKQTIYVWFDALLGYISAL-- 320 Query: 245 LDNPDG-------SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 P+G + + WPA +H+IGKDILRFHA+YWPA L+SA+LPLP+ VF HGF+ Sbjct: 321 --LPEGKEPILTNATERGWPASVHIIGKDILRFHAVYWPAMLMSADLPLPEAVFGHGFLT 378 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 G K+ KSLGN I+P E++ + G D++RY+ ++EI GKDG + + + VNA+LAN Sbjct: 379 KDGLKMGKSLGNTIEPRELVSKFGPDSVRYYFLKEIEFGKDGDFSEKRFIEIVNANLANT 438 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 IGNL++R++ ++ K+ D +IP + + I + + + + + + A + Sbjct: 439 IGNLLNRTLGLLKKNCDAVIPVDSSSISEENPIRILAAESVSKAKLHYSELDYSSACDII 498 Query: 418 ISLVSEVDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + + + + Y + PW L K + + A+ L V +E +R +A+ L VP+L N+I+ Sbjct: 499 LGIATAGNLYMSEKAPWSLFKEGGSAAEDAAQELTVILEAVRIIAVALSPVVPELCNRIY 558 >gi|148906837|gb|ABR16564.1| unknown [Picea sitchensis] Length = 704 Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 187/472 (39%), Positives = 269/472 (56%), Gaps = 9/472 (1%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y NA PH+G AY I AD +ARF RL G V+F TGTDEHG+KIA AA G Sbjct: 152 LTTPLYYVNAPPHMGSAYTTIAADAMARFQRLQGKKVVFITGTDEHGEKIAMAAAAKGQN 211 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 K D+ + +++ + LDI+YD FIRTT H + + +I KGDIY Y G Y Sbjct: 212 PKDHCDRIACDYQALWKDLDITYDKFIRTTNPCHEAIVKEFYTRIIAKGDIYHADYEGLY 271 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E Y + E+ + + P + +E+ YFF LS YQ L ++P F+ Sbjct: 272 CVNCEEYKDGKELL---EDECCPIHRKPCELRKEDNYFFSLSKYQKPLEELLTANPNFVQ 328 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P R NEV S+VK GL+D S+SR T +WGI +P+D + +YVW+DA+ Y++ +N Sbjct: 329 PPYRLNEVQSWVKGGLRDFSISRATVEWGIPVPNDSKQTIYVWVDAMLGYVSALLKDENE 388 Query: 249 ---DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D + A WPA LH+IGKDILRFHA+YWPA L+SANL LP VF HGF+ G K+ K Sbjct: 389 PTLDNAVAGGWPASLHLIGKDILRFHAVYWPAMLMSANLKLPATVFGHGFLTKDGLKMGK 448 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGNV++P ++I+ G DA+RYF +REI G DG Y ++ VNA LAN IGNL++R+ Sbjct: 449 SLGNVLEPKDLIDRFGCDAVRYFFLREIEFGNDGDYSEERFTNIVNAHLANTIGNLLNRT 508 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 + ++ + + ++++ R + N + A VI + + + Sbjct: 509 LGLLKRYCQSTLTIDSNSAAEYNPFKEHVMELVEKARLDYMNLSFNSACEAVIDIANAGN 568 Query: 426 RYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 Y D PW L K ++ + A+ L V +E +R A+ L VP+L KI+ Sbjct: 569 VYLDEHTPWSLFKKGDSSAEEAAKDLVVILEAMRITAVALSPIVPRLCRKIY 620 >gi|226226140|ref|YP_002760246.1| methionyl-tRNA synthetase [Gemmatimonas aurantiaca T-27] gi|226089331|dbj|BAH37776.1| methionyl-tRNA synthetase [Gemmatimonas aurantiaca T-27] Length = 515 Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 198/514 (38%), Positives = 286/514 (55%), Gaps = 19/514 (3%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + Y++TAI Y N PH+GHA E I ADV+AR+ RL G DV G DEHGQK+ + A Sbjct: 3 RFYLTTAIDYANGDPHLGHALEKIGADVIARYRRLCGDDVHLLIGMDEHGQKVQQTAAKE 62 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--DIYKGC 123 GV + F D + F+ M L ISYD FIRTTE H + L ++I+++ D Y+ Sbjct: 63 GVAPQAFTDTIAARFQGMWSRLGISYDQFIRTTEAHHKLGVQTLIRRIAERNPDDFYERS 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+G Y + E++ D ++ DG+ ++ +EE +FFRLS YQ L S+ Sbjct: 123 YTGMYCVGCESFKQDADI---VDGKCVLHPTRTLEEVEERNWFFRLSKYQGFLQDLLASN 179 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQYIMYVWIDALTNYL 239 P FI P RRNE++ + GL+D+S SR DW + P + YVW DAL NYL Sbjct: 180 PSFIEPSSRRNEILGLLAQGLEDISASRARLDWAVPFPLVLSNGETQGTYVWFDALPNYL 239 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T TG+ PD + WPADLH+IGKDI RFH + WPA L +A LPLPK+V++HGF+ Sbjct: 240 TATGF---PDEGYDQRWPADLHIIGKDITRFHVVIWPAMLQAAGLPLPKQVWAHGFVQLG 296 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 GE+ SKS G +D E I+ GVDA RY L+RE+ DG + + ++R ADLAN G Sbjct: 297 GERFSKSAGVKLDLGEAIDRFGVDAFRYVLLREVPFDGDGNFSWERFEERYTADLANAFG 356 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL SR+++M+ K +DG++PT A E+++ + + + QL H LA V Sbjct: 357 NLASRAMAMVEKYFDGVVPT-AAMPEAEQGDAEEIAEYHRAMHGENGWQL-HEGLAAVGR 414 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L + + + A PW + K RA +L + I + +LL F+P+ + +++ +L Sbjct: 415 LTARANEFTAATAPWTVAKDESRRAELEVILASLIRRIARQTVLLVPFMPEKSAQLWRML 474 Query: 478 FVADE--NRCFQSLDQRLKPGFMLHKTFDPIFPR 509 E + F L+ + + K DP+FPR Sbjct: 475 GAPGEVSAQRFDQLESLDVSAWQVRKG-DPLFPR 507 >gi|208434910|ref|YP_002266576.1| methionyl-tRNA synthetase [Helicobacter pylori G27] gi|208432839|gb|ACI27710.1| methionyl-tRNA synthetase [Helicobacter pylori G27] Length = 650 Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 200/510 (39%), Positives = 305/510 (59%), Gaps = 6/510 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F+D D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + D +EEE YFFRLSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETALLEEESYFFRLSAYEKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL++ D A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNDLDNKMAHFECAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNYSLKS-AKVTAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNIY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +++ ++PW L K N ++ +L + V+ Q + LL AF+PK A K+ V Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANVLLQSSFLLYAFMPKSAMKLASAFRVE 479 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 ++ + K M+ + +P+F + Sbjct: 480 ITPNNYERFFKAKKLQDMILQDTEPLFSKM 509 >gi|302418792|ref|XP_003007227.1| methionyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] gi|261354829|gb|EEY17257.1| methionyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] Length = 620 Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 187/521 (35%), Positives = 279/521 (53%), Gaps = 41/521 (7%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + Y+++ I Y NA PH+GH Y MI+AD L R+ L G D L+ TGTDEHG K+ +AA Sbjct: 66 KPFYVTSPIFYVNASPHVGHMYTMILADSLKRWQTLRGRDALYCTGTDEHGMKVQRAAAK 125 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ K F D N+ FR +A I D F+RTT+ H D + W + G +Y+ + Sbjct: 126 QGIPPKAFCDNNADKFRQLAAACGIDNDFFVRTTDADHMDAVQHFWHLLRAGGHVYESTH 185 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYN------AQHNPVQWMEEEGYFFRLSAYQDKLLS 178 SGWY + DE +Y +DEV + Q A + V+W EE+ Y FR+ A +D+LL Sbjct: 186 SGWYCVSDECFYAEDEVERAIVPQTGRTIMASIATGSEVEWTEEKNYHFRMKAMRDRLLQ 245 Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALT 236 +Y+ +P++I+P R NEV+S+V+ L+DLS+SR FDWGI++PDDP +YVW+DAL Sbjct: 246 FYDDNPDWIVPRARMNEVVSWVRHNLEDLSISRPVSRFDWGIRVPDDPSQTIYVWVDALI 305 Query: 237 NYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYLT G+ P + WPAD+HVIGKDI+RFH +YWPA LL+ LP PK++ SH Sbjct: 306 NYLTKAGFPAWAPGDEHSGGWPADVHVIGKDIVRFHGVYWPALLLAVGLPPPKQLLSHAH 365 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +K+SKS+GNV++P + IE +D +RYF++R+ D Y+ + R DL Sbjct: 366 WTLGKKKMSKSVGNVVNPFQAIERWDLDTMRYFMLRDGGLENDADYENRFIFARYEKDLQ 425 Query: 356 NGIGNLVS---RSVSMILKD--------------------------YDGMIPTPGAFTES 386 +GN +S RS + D + P + Sbjct: 426 WTLGNALSRITRSTKWNVADAVRWARDHHHQAAAAAAAHGAEVEAEVEASADAPQSRQRR 485 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-S 445 +++ RV+ E N A+ ++L+ E +++ PW+ K D A + Sbjct: 486 LAALVDETPRVMAAAMETDLNP--SAAIKAAMTLLVEANKFIADSAPWDKTKVPSDAARN 543 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 +++ E +R +LLQ F+P ++ DIL V R F Sbjct: 544 AIVFHAAEALRVAGVLLQPFMPGKMGEMLDILGVQPARRTF 584 >gi|312210263|emb|CBX90350.1| similar to methionyl-tRNA synthetase [Leptosphaeria maculans] Length = 585 Score = 349 bits (896), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 190/503 (37%), Positives = 274/503 (54%), Gaps = 20/503 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I Y NA PH+GH Y M++AD+ R+H L G L TGTDEHG KI +AA Sbjct: 49 KKPYYITTPIFYVNAAPHVGHLYTMVLADIHKRWHVLKGEKALLCTGTDEHGLKIQRAAA 108 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AGV K F D+ + F+D+A +I+ D F+RTT++ H D + W + +KG IY+ Sbjct: 109 KAGVDPKTFCDRGAEIFKDLAKKAEIANDHFVRTTDREHKDAVQYAWFLLQEKGLIYEQK 168 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDKLL 177 + GWYS+ DE +Y V D + V+W EE Y FRLS ++DKLL Sbjct: 169 HEGWYSVSDECFYPQSGVQPWLDPVTGRKIITSIETGSEVEWSSEENYHFRLSLFRDKLL 228 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDAL 235 +++ +PE+I P R EVI+ V+SGL+DLS+SR +WGI++P D +YVW+DAL Sbjct: 229 QFFKENPEWITPEHRMKEVIAAVESGLEDLSISRPYDRLNWGIRVPGDDTQTIYVWLDAL 288 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY T GY P A WPAD HVIGKDI+RFH IYWPAFL++ NLPLP+K+ +H Sbjct: 289 LNYATKAGYPWAPGYEHAGGWPADCHVIGKDIVRFHCIYWPAFLMALNLPLPRKIMTHAH 348 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 G+K+SKS G V+DP ++ G D +R++L + DG YD + K L+ Sbjct: 349 WTLFGKKMSKSTGTVVDPFHALDRFGPDVMRFYLATDGGTVDDGNYDNSRIIKLYTTFLS 408 Query: 356 NGIGNLVSR-------SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408 +GN+ SR SV ++ G P A + + V ++ + + Sbjct: 409 QQLGNMASRVMRGKKWSVRGAVQRVGGRSPDEWAEGPGSKFYKNSLCNVAAQMDDAFETY 468 Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPDRAS----TVLYVTVEVIRQLAILLQ 463 RA + V +++F PW+ PD ++++ E +R ILLQ Sbjct: 469 DPRRATLLISEFVRGSNKFFQMSSPWDKCLSYAPDEPGEEVDKIIFLAAESLRIAGILLQ 528 Query: 464 AFVPKLANKIFDILFVADENRCF 486 ++P A ++ D L VA E R F Sbjct: 529 PYMPNKAAELLDQLGVARERRGF 551 >gi|315586930|gb|ADU41311.1| methionine--tRNA ligase [Helicobacter pylori 35A] Length = 650 Score = 349 bits (896), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 194/473 (41%), Positives = 291/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F+D D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y ++ D +EEE YFFRLSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAASKMDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+ D A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNGLDNKMAHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKL 472 >gi|317012812|gb|ADU83420.1| methionyl-tRNA synthetase [Helicobacter pylori Lithuania75] Length = 650 Score = 349 bits (895), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 200/510 (39%), Positives = 302/510 (59%), Gaps = 6/510 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A Sbjct: 2 QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSASL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F+D D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + D +EEE YFFRLSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILPI R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+ D A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNGLDNKMAHFECAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNYSLKST-KITAYYSKELEKAHQILDNANSFVPRMQLHKALEELFNIY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +++ ++PW L K N ++ +L + V+ Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANVLLQSSFLLYAFMPKSAAKLASAFHTE 479 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 ++ + K M+ + +P+F + Sbjct: 480 ITPNNYERFFKAKKLQDMILQDTEPLFSKM 509 >gi|224369775|ref|YP_002603939.1| methionyl-tRNA synthetase [Desulfobacterium autotrophicum HRM2] gi|223692492|gb|ACN15775.1| MetS [Desulfobacterium autotrophicum HRM2] Length = 648 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 199/521 (38%), Positives = 295/521 (56%), Gaps = 21/521 (4%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 MK + Y +T I Y NA+PH+GHAY I DV AR+ R+ F TGTDEHG KI + Sbjct: 1 MKTSDPRYFTTPIYYVNAKPHLGHAYTTIATDVAARYSRMCARPTYFLTGTDEHGDKIVE 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA + K +VD+ S F+++ L+IS D FIRTT+ H L +I + GDIY Sbjct: 61 AATREETSPKAYVDRISALFKNLWPRLNISNDHFIRTTDPDHIKVVENLLTRIHESGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 Y G Y E +Y + E+ DG+ + P + ++E YFF + YQD L+ + Sbjct: 121 FSEYEGIYCFGCERFYQEREL---VDGKCPDHGTVPKK-IKESNYFFAMGKYQDWLIDHI 176 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238 +P+FI P RNEV+SF+K L+DL +SR WGI +P D Y+ YVW DALTNY Sbjct: 177 TRNPDFIRPERYRNEVLSFLKEPLEDLCISRPKSRLTWGITLPFDHDYVTYVWFDALTNY 236 Query: 239 LTTTGYLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 L+ GY PDG + K FWP H + KDI++ H IYWP L +A + + + HGF Sbjct: 237 LSALGY---PDGERFKTFWPHTRHFVAKDIIKPHGIYWPCMLKAAGIDPYQSLNVHGFWN 293 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 G K+SKS+GNV DP+E+I+ GVD RYFL+RE+ G D + +D + +R+N+DLAN Sbjct: 294 VGGSKMSKSIGNVTDPVEIIDTYGVDTFRYFLMREMVFGLDSNFTEDSIVQRINSDLAND 353 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 +GNL SR VSM+ + + G P + D S+ +++ +M+ H+AL V Sbjct: 354 LGNLFSRVVSMVHRYFKGETPGVDKGLDKDLSLEHQAWECVEKFTLHMEETEFHKALISV 413 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +S ++RY D Q PW L K +P++ TV+Y V+ +R ++ L+ +P ++++ Sbjct: 414 WEFISTMNRYIDTQAPWTLSK-DPEKKPALETVMYNLVQGLRTVSCLIYPIMPDTSHRML 472 Query: 475 DILFV-ADENRCFQSLDQ-----RLKPGFMLHKTFDPIFPR 509 IL + +R F ++ + +K G ++ K +FPR Sbjct: 473 TILNIQPPRDRDFYTMAEIFPWHGVKAGTLIQKA-PVLFPR 512 >gi|159107898|ref|XP_001704224.1| Methionyl-tRNA synthetase [Giardia lamblia ATCC 50803] gi|157432280|gb|EDO76550.1| Methionyl-tRNA synthetase [Giardia lamblia ATCC 50803] Length = 582 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 190/560 (33%), Positives = 297/560 (53%), Gaps = 53/560 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E K+Y++T I Y N +PHIGH + ++AD L RF +L G + TGTDEHGQK+ ++A Sbjct: 2 EARKVYLTTPIYYVNGKPHIGHVFTTLLADTLKRFRKLQGFETYLMTGTDEHGQKVQQSA 61 Query: 63 QNAGVTTKVFVDQNSRNFRD-MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + G+ + + D ++ F + + D F+RTT +H + LW+K+ G IYK Sbjct: 62 EKMGLQPQQWCDNMAKTFETYFLENFGLCPDVFMRTTMPKHVEMATKLWEKLRTAGLIYK 121 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKL 176 Y GWY + DEA+ + + G D Q + P ++ EE Y FRLS++Q+ L Sbjct: 122 DKYEGWYCVADEAFVTETNLKDGVDAQGKPCKVSAESGQPCVFLSEENYKFRLSSFQEPL 181 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDA 234 L +Y+ +PE I+P R+ E++SF+ SGL D+S+SR WGI +P D ++MYVWIDA Sbjct: 182 LKFYQDNPEIIIPAFRQAEIVSFIHSGLHDISISRSKDKISWGIPVPGDSDHVMYVWIDA 241 Query: 235 LTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 L YLT NPDG+ ++ WPAD+ +GKDI RFH +YW AFL+ A++P P++ F H Sbjct: 242 LAIYLTAADSTINPDGTFSSRLWPADVQFLGKDIARFHCVYWLAFLMGASIPCPRRFFIH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+ +KI KSLGN +DP+ ++E G+D ++YF++RE + D ++ + R +D Sbjct: 302 GWWTINHQKIGKSLGNALDPMSLVEAYGLDGVKYFMLREGSPANDPGITEELISMRTESD 361 Query: 354 LANGIGNLVSRSVSMIL----------KDYDG--------------------MIPTPGAF 383 LAN +GNL R + L K ++G ++P Sbjct: 362 LANVLGNLTMRCTADSLLPDRAWTDPSKLFEGVSFAQIRSLWMKSRRSSIAELLPADAGE 421 Query: 384 TESDESILSVCS---------RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 E+ SI+ + + +E+ M N I AL+++ ++ ++ Y PW Sbjct: 422 RENISSIIKINDISDLLDKGLAICEEVTNLMDNIDIPGALSKIFEILVGINNYIQLTMPW 481 Query: 435 EL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS---L 489 L K + V+Y E++R A LL F+P+ A I D L V+ E+R + Sbjct: 482 VLIKKAETKNGHEFVMYCANELLRVCATLLLPFIPQKAPLILDQLGVSSEDRVIKREVLT 541 Query: 490 DQRLKPGFMLHKTFDPIFPR 509 + PG L + P+FP+ Sbjct: 542 IGYIAPGLTLGEKLPPLFPK 561 >gi|87303680|ref|ZP_01086455.1| methionine--tRNA ligase [Synechococcus sp. WH 5701] gi|87281785|gb|EAQ73750.1| methionine--tRNA ligase [Synechococcus sp. WH 5701] Length = 529 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 186/471 (39%), Positives = 262/471 (55%), Gaps = 9/471 (1%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y N +PH+G AY + D LARF RL G V+F TG DEHG KI + A+ AG+T Sbjct: 5 LTTPLYYVNDKPHLGSAYTTLACDALARFQRLMGRQVVFITGCDEHGLKIQRTAEAAGLT 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + DQ S +RD+ ISYD FIRT+E RH ++++ GD+ +G GWY Sbjct: 65 PQAHCDQVSDQYRDLWQRWQISYDRFIRTSEPRHRLLVEQFYRRVEAAGDVVEGRQRGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + +D + + P++W +E FFRLS YQ + + P FI Sbjct: 125 CVACEEFKDDPPEARAPQ---CSTHQRPLEWRDELNLFFRLSRYQQAIEELIQ-RPGFIA 180 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT-GYLDN 247 P RR EV +FV GL D S+SR WGI +P + YVW DAL YLT D Sbjct: 181 PASRRREVENFVAQGLHDFSISRLDLPWGIPVPGHEGHTFYVWFDALLGYLTALLEPGDP 240 Query: 248 PDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 PD + + WPA +HVIGKDILRFHA+YWPA LLSA L LP++VF HGF+ +G+K+ K Sbjct: 241 PDLALLSQRGWPASIHVIGKDILRFHAVYWPAMLLSAGLDLPERVFGHGFLTREGQKMGK 300 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGNV+DP E++E G DA+R++L+R+I G DG + VN DLAN IGNL++R+ Sbjct: 301 SLGNVLDPGELLERCGPDAVRWYLLRDIPFGDDGDVQQQRFSDLVNNDLANTIGNLLNRT 360 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 SM + +D +P P S + +++ E M+ +A A + L + Sbjct: 361 SSMARRWFDQAVPAPSEAVGSSHPLAQAALLAREQVIEGMERLDFRQAAAAALQLAISAN 420 Query: 426 RYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIF 474 + + Q PW K R LY +E RQ+A+LL +P L+ ++ Sbjct: 421 GFLNDQAPWSRMKQEGQRQQVADDLYAVLEAARQVALLLAPILPDLSARML 471 >gi|188527820|ref|YP_001910507.1| methionyl-tRNA synthetase [Helicobacter pylori Shi470] gi|188144060|gb|ACD48477.1| methionyl-tRNA synthetase [Helicobacter pylori Shi470] Length = 662 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 194/473 (41%), Positives = 290/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F+D D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + D +EEE YFFRLSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+ D A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNGLDNKMAHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANTLLQSSFLLYAFMPKSAAKL 472 >gi|261838373|gb|ACX98139.1| methionyl-tRNA synthetase [Helicobacter pylori 51] Length = 653 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 194/473 (41%), Positives = 290/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F+D D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + D +EEE YFFRLSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILPI R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL++ D F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNDLDNKMVHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALTERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAVKL 472 >gi|224112799|ref|XP_002316296.1| predicted protein [Populus trichocarpa] gi|222865336|gb|EEF02467.1| predicted protein [Populus trichocarpa] Length = 610 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 186/479 (38%), Positives = 276/479 (57%), Gaps = 9/479 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E ++T + Y NA PH+G AY I AD +ARF RL G V+F TGTDEHG+KIA +A Sbjct: 68 ETFVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLGKKVIFVTGTDEHGEKIAASAAA 127 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG T D S+ ++ + L+I+YD FIRTT+ +H + + ++ KGDIY+ Y Sbjct: 128 AGSTPSEHCDVISQAYKTLWKDLEITYDKFIRTTDPKHEGIVKEFYSRVLAKGDIYRADY 187 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + E Y ++ E+ D + P +E+ YFF LS YQ +L +P Sbjct: 188 EGLYCVNCEEYKDEKELL---DNKCCPTHLKPCIERKEDNYFFALSKYQKQLEENLTQNP 244 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TG 243 +F+ P R NEV S++KSGLKD S+SR + DWGI +P+D + +YVW DAL Y++ + Sbjct: 245 KFVQPPFRLNEVQSWIKSGLKDFSISRASVDWGIPVPNDNKQTIYVWFDALLGYISALSA 304 Query: 244 YLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 + PD A WPA LH+IGKDILRFHA+YWPA L+SA + LPKKVF HGF+ G Sbjct: 305 ENEQPDLQTAVSSGWPASLHLIGKDILRFHAVYWPAMLMSAGVDLPKKVFGHGFLTKDGM 364 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+ KSLGN ++P E++ G DA+RYF +RE+ G DG Y ++ VNA LAN IGNL Sbjct: 365 KMGKSLGNTLEPNELVHNFGSDAVRYFFLREVEFGSDGDYSEERFINIVNAHLANTIGNL 424 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R++ ++ K+ + A ++ +++++ R + +N + A V+ + Sbjct: 425 LNRTLGLLKKNCQSTLAVDSAVAAEGNALKDTIEKLVEKARIHYENLSLSSACEAVLEIG 484 Query: 422 SEVDRYFDAQKPWELKKTN---PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + Y D PW K + A+ L + +E +R +AI L P +I++ L Sbjct: 485 NAGNAYMDENAPWTRFKQGGAASEAAAKDLVIILEAMRIVAIALSPVAPSFCWRIYEQL 543 >gi|317180163|dbj|BAJ57949.1| methionyl-tRNA synthetase [Helicobacter pylori F32] Length = 650 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 194/473 (41%), Positives = 290/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F+D D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + D +EEE YFFRLSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+ D A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNGLDNKMAHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKL 472 >gi|296086256|emb|CBI31697.3| unnamed protein product [Vitis vinifera] Length = 611 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 188/490 (38%), Positives = 274/490 (55%), Gaps = 14/490 (2%) Query: 3 ERE---KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 ERE ++T + Y NA PH+G AY I AD +ARF RL G V+F TGTDEHG+KIA Sbjct: 63 EREVSDSFVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLSGKKVIFITGTDEHGEKIA 122 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AA G + D S+ ++ + LDI+YD FIRTT +H + + ++ GDI Sbjct: 123 TAAAACGSSPSEHCDVISQAYKTLWQDLDIAYDKFIRTTNPKHEAIVKEFYSRVLANGDI 182 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 Y+ Y G Y + E Y ++ E+ + P +E+ YFF LS YQ L Sbjct: 183 YRADYEGLYCINCEEYKDEKELL---ENNCCPMHLKPCVLRKEDNYFFALSKYQKLLEET 239 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 +P+F+ P R NEV S++KSGL+D S+SR + DWGI +P+D + +YVW DAL Y+ Sbjct: 240 LTQNPDFVQPSFRLNEVQSWIKSGLRDFSISRASVDWGIPVPNDNKQTIYVWFDALLGYI 299 Query: 240 TTTGYLDN--PDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 + DN PD A WPA LH+IGKDILRFHA+YWPA LLSA L LPK VF HGF Sbjct: 300 SALSE-DNEQPDLQSAVSSGWPASLHLIGKDILRFHAVYWPAMLLSAGLSLPKMVFGHGF 358 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + G K+ KSLGN ++P ++++ G DA+RYF +RE+ G DG Y +D VNA LA Sbjct: 359 LTKDGMKMGKSLGNTLEPNDLVQRFGSDAVRYFFLREVEFGNDGDYSEDRFINIVNAHLA 418 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N IGNL++R++ ++ K+ + + +++++ + +N + A Sbjct: 419 NTIGNLLNRTLGLLKKNCQSTLAVDSTLAAEGNAFKDTVDKLVEKAKFQYENLSLSSACE 478 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTV---LYVTVEVIRQLAILLQAFVPKLANK 472 V+ + + + Y D + PW L K + L + +E +R +AI L P+L+ + Sbjct: 479 AVLEIGNAGNLYIDERAPWSLFKQGAAASEAAAKDLVIILEAMRIIAIALSPVTPRLSLR 538 Query: 473 IFDILFVADE 482 I++ L E Sbjct: 539 IYEQLGYTKE 548 >gi|297380215|gb|ADI35102.1| methionyl-tRNA synthetase [Helicobacter pylori v225d] Length = 653 Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 193/473 (40%), Positives = 289/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F+D D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + D +EEE YFFRLSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCTISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYKKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+ D A F H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNGLDNKMAHF-ACTRHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKL 472 >gi|108563402|ref|YP_627718.1| methionyl-tRNA synthetase [Helicobacter pylori HPAG1] gi|107837175|gb|ABF85044.1| methionyl-tRNA synthetase [Helicobacter pylori HPAG1] Length = 643 Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 199/510 (39%), Positives = 303/510 (59%), Gaps = 6/510 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F+D D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + D +EEE YFF+LS Y+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFKLSTYEKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILPI R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASM 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+ D A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNGLDNKMAHFECAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNYSLKS-AKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +++ ++PW L K N ++ +L + V+ Q + LL AF+PK A K+ V Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANVLLQSSFLLYAFMPKSATKLASAFRVE 479 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 ++ + K M+ + +P+F + Sbjct: 480 ITPNNYERFFKAKKLQDMILQDTEPLFSKM 509 >gi|318041393|ref|ZP_07973349.1| methionyl-tRNA synthetase [Synechococcus sp. CB0101] Length = 522 Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 178/471 (37%), Positives = 263/471 (55%), Gaps = 9/471 (1%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y N +PH+G AY + D LARF RL G V+F TG DEHGQKI + A+ AG++ Sbjct: 5 LTTPLYYVNDKPHLGSAYTTLACDALARFQRLKGERVVFITGCDEHGQKIQRTAEAAGLS 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D S +R++ D IS++ IRTT+ RH + ++ GDI +G GWY Sbjct: 65 PQAHCDGVSAQYRELWDRWQISHNRLIRTTDPRHQRIVEQFFARVEANGDIVEGRQQGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + +D + + + P++W +E FFRLS YQ+++ + + P FI Sbjct: 125 CVACEEFKDDPHEAQDPECPTH---RRPLEWRDELNLFFRLSRYQEQIEALI-AQPGFIQ 180 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT---TGYL 245 P RRNEV +FVK GL+D S+SR WGI +P + YVW DAL Y+T G Sbjct: 181 PASRRNEVENFVKQGLRDFSISRVNLPWGIPVPGHEGHTFYVWFDALLGYITALLEEGDA 240 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + D + ++ WPA +HVIGKDILRFHA+YWPA LLSA L LP KVF HGF+ +G+K+ K Sbjct: 241 PDLDTAISRGWPASVHVIGKDILRFHAVYWPAMLLSAGLELPAKVFGHGFLTREGQKMGK 300 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGNV+DP E++E G DA+R++L+R+I G DG + + VN DLAN IGNL++R+ Sbjct: 301 SLGNVLDPAELLERCGRDAVRWYLLRDIPFGDDGDFQQQRFSDLVNNDLANTIGNLLNRT 360 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 SM + ++ +P SD + + + ++ A + L + Sbjct: 361 SSMARRWFEECVPPATGAANSDHPLAQAAATARTTVLTALEQLDFRSAAEAALQLAIAAN 420 Query: 426 RYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIF 474 + + Q PW K R LY +E R A+L+ +P L+ ++ Sbjct: 421 GFLNEQAPWSRMKQEGTREQVADDLYAVLEAARITALLMAPLLPDLSERML 471 >gi|210135200|ref|YP_002301639.1| methionyl-tRNA synthetase [Helicobacter pylori P12] gi|210133168|gb|ACJ08159.1| methionyl-tRNA synthetase [Helicobacter pylori P12] Length = 650 Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 193/473 (40%), Positives = 290/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F+D D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + D +EEE YFFRLSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETALLEEESYFFRLSAYEKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL++ D F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNDLDNKMVHFECAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSATKL 472 >gi|317178659|dbj|BAJ56447.1| methionyl-tRNA synthetase [Helicobacter pylori F30] Length = 650 Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 193/473 (40%), Positives = 290/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F+D D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y ++ D +EEE YFFRLSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAASKMDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+ D F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNGLDNKMVHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNHSLKST-KITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKL 472 >gi|15645045|ref|NP_207215.1| methionyl-tRNA synthetase [Helicobacter pylori 26695] gi|2501030|sp|P56127|SYM_HELPY RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|2313521|gb|AAD07483.1| methionyl-tRNA synthetase (metS) [Helicobacter pylori 26695] Length = 650 Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 194/473 (41%), Positives = 291/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F+D D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + D +EEE YFFRLSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL++ D A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNDLDNKMAHFECAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNHSLKST-KITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAVKL 472 >gi|218192309|gb|EEC74736.1| hypothetical protein OsI_10474 [Oryza sativa Indica Group] Length = 602 Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 192/516 (37%), Positives = 290/516 (56%), Gaps = 22/516 (4%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y NA PH+G AY I AD +ARF RL V+F TGTDEHG+KIA +A+ G Sbjct: 65 LTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLDKRVVFITGTDEHGEKIATSAEACGRN 124 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 K D S +++ + LDI YD FIRTT+++H + ++ D GDIY+ Y G Y Sbjct: 125 PKDHCDTISNSYKMLWADLDIEYDKFIRTTDRKHEAVVNDFYSRVLDSGDIYRADYEGLY 184 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E Y ++ E+ + + P +E+ YFF LS YQ +L +P F+ Sbjct: 185 CVSCEEYKDEKEL---GENKCCPVHLKPCVPRKEDNYFFALSKYQHQLEDLLTKNPNFVR 241 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P R NEV +VKSGL+D S+SR + +WGI +P+D + +YVW DAL Y++ LD Sbjct: 242 PSHRLNEVQGWVKSGLRDFSISRASVEWGIPVPNDTKQTIYVWFDALLGYIS--ALLD-- 297 Query: 249 DGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 DG KA WPA LH+IGKDILRFHA+YWPA L+SA + +P VF HGF+ G Sbjct: 298 DGEKASLQQAVERGWPASLHLIGKDILRFHAVYWPAMLMSAGISVPDAVFGHGFLTKDGM 357 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+ KSLGN ++P +++ GVDA+RYF +RE+ G DG Y ++ VNA LAN IGNL Sbjct: 358 KMGKSLGNTLEPKDLVNRFGVDAVRYFFLREVEFGNDGDYSEERFINIVNAHLANTIGNL 417 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R++ ++ K+ + S+ ++ + ++ +N L+ A ++ + Sbjct: 418 LNRTLGLLKKNCKSTLAFDSIAAADGISLKDNVENLVDKAKDQFENLLLSSACETLMEIG 477 Query: 422 SEVDRYFDAQKPWELKKT---NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL- 477 + + Y D Q PW K + ++A+ L + +E +R +AI L P L+ +I+ L Sbjct: 478 NLGNLYIDEQAPWSCFKQGGESAEKAAKDLVIILETMRIIAIALSPITPSLSLRIYTQLG 537 Query: 478 FVADENRCFQSLDQR---LKPGFMLHKTFDPIFPRF 510 F D+ R + D + LK G ++ + P+F R Sbjct: 538 FTEDQFRTLRWEDTKWGGLKAGQVMMEP-KPVFARI 572 >gi|259481569|tpe|CBF75211.1| TPA: methionyl-tRNA synthetase, putative (AFU_orthologue; AFUA_4G07820) [Aspergillus nidulans FGSC A4] Length = 569 Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 183/494 (37%), Positives = 270/494 (54%), Gaps = 27/494 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y NA PH+GH Y M++AD+L R+ L G + TGTDEHG KI +AA AG Sbjct: 56 YVTTPIFYVNAAPHVGHLYTMVLADILKRWRTLTGDNEAQLLTGTDEHGMKIQQAANAAG 115 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + T+ F D+N F+ +A+ ++ Y+ FIRTTE H + + W+ + +G IY + G Sbjct: 116 IDTQAFCDRNCLTFKALAEAANVDYNYFIRTTEPAHKEAVQYFWEMLQHRGYIYTSKHEG 175 Query: 127 WYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 WYS+ DE +Y +V G V+W E Y FRLSA+QD+LL Y Sbjct: 176 WYSVSDETFYPQSQVNLSLDPATGRKRMVSTETGKEVEWSSETNYHFRLSAFQDRLLELY 235 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238 ++ +FI P +V+ V SGL DLS+SR + WGI +P+D +YVW+DAL NY Sbjct: 236 KT--DFITPTHYTEQVVKSVASGLSDLSISRPVERLTWGIPVPNDNTQTIYVWLDALVNY 293 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 LT GY P WPAD+HV+GKDI+RFH +YWPAFL++ +LPLP+ V H Sbjct: 294 LTKAGYPFPPGEGSRLGWPADVHVVGKDIVRFHCVYWPAFLMALDLPLPRNVLVHAHWTM 353 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 EK+SKS GNV++P I+ G+D +R+FL D YD + + L G+ Sbjct: 354 NREKMSKSTGNVVNPFFAIDRFGMDTMRFFLAHRGGLASDSDYDNRYIIRDYKKYLQQGL 413 Query: 359 GNLVSRSVSMI---LKDY-----DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410 GN+ R++ L+DY G P T D++ ++ ++ + M+ Sbjct: 414 GNIAHRTIGCAKGKLRDYIINATSGNSPA----TADDQAYQKTLEQLSHKVAKCMEALDP 469 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL +++ ++ ++YF +PW+ NP+ V++ E +R + ILLQ F+P A Sbjct: 470 RAALEEIVEVILLTNKYFHNSEPWQ----NPEEKQRVIFNAAESMRIMGILLQPFMPNKA 525 Query: 471 NKIFDILFVADENR 484 K+ DIL V R Sbjct: 526 KKLLDILKVDPSKR 539 >gi|261839774|gb|ACX99539.1| methionyl-tRNA synthetase [Helicobacter pylori 52] Length = 653 Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 193/473 (40%), Positives = 290/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F+D D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + D +EEE YFFRLSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL++ D F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNDLDNKMVHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAMKL 472 >gi|308183143|ref|YP_003927270.1| methionyl-tRNA synthetase [Helicobacter pylori PeCan4] gi|308065328|gb|ADO07220.1| methionyl-tRNA synthetase [Helicobacter pylori PeCan4] Length = 653 Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 193/473 (40%), Positives = 291/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F++ D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + D +EEE YFF+LSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILPI R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL++ D A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNDLDNKMAHFERAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALTERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKTHQILDNANSFVPKMQLHKALEELFNVY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKL 472 >gi|309806717|ref|ZP_07700712.1| methionine--tRNA ligase [Lactobacillus iners LactinV 03V1-b] gi|308166897|gb|EFO69081.1| methionine--tRNA ligase [Lactobacillus iners LactinV 03V1-b] Length = 608 Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 180/465 (38%), Positives = 284/465 (61%), Gaps = 12/465 (2%) Query: 57 KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116 K++K A+ G+ + FVD + +++ + +LDISYD FIRTT++ H + +++++ + Sbjct: 6 KLSKKAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQ 65 Query: 117 GDIYKGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLS 170 GDIY G Y GWYS+ DE Y+ + EVYK G+ + + V+ ++E YFFR+S Sbjct: 66 GDIYLGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMS 125 Query: 171 AYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229 Y D+LL YY+ +P+FILP R E+I+ F+K GL+DLS++R T DWGI +P DP++++Y Sbjct: 126 KYADRLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVY 185 Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289 VWIDAL+NY++ GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK+ Sbjct: 186 VWIDALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQ 245 Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 +F HG++L K K+SKS GN + P ++ G+DALRY+L+R I G DG + + +R Sbjct: 246 IFGHGWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVER 305 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQ 408 VN DLAN +GNL++R++SMI + DG++ P E + + + + + E M Sbjct: 306 VNFDLANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQMDAL 365 Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVP 467 +AL + L+S ++Y D PW L K D V+ E +R +A+L++ + Sbjct: 366 HFSKALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMT 425 Query: 468 KLANKIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510 + IF+ L ++ ++ SL G+ + K PIFPR Sbjct: 426 QSPVHIFEQLGLSLDDANAASLCWGAY-GWQNYVTKNPKPIFPRL 469 >gi|145257023|ref|XP_001401591.1| methionyl-tRNA synthetase [Aspergillus niger CBS 513.88] gi|134058501|emb|CAL00710.1| unnamed protein product [Aspergillus niger] Length = 575 Score = 347 bits (889), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 186/490 (37%), Positives = 275/490 (56%), Gaps = 20/490 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAA 62 ++ Y++T I Y NA PH+GH Y M++ADV+ R+ L G D TGTDEHG KI +AA Sbjct: 54 KKPYYVTTPIFYVNAAPHVGHLYTMVLADVIKRWRTLIGDADAQLLTGTDEHGMKIQQAA 113 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 A + T+ F D N + F +A+ ++ Y+ FIRTTE H + + W+ + +G +Y Sbjct: 114 LAAEMDTQAFCDMNYKTFEALANAANMDYNYFIRTTEPAHKEAVQYFWEVLEHRGYVYTA 173 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH------NPVQWMEEEGYFFRLSAYQDKL 176 + GWYS+ DE +Y +V K D + + + V+W E Y FRLSA+Q++L Sbjct: 174 KHEGWYSVSDETFYPQTQVQKSLDPETGHTKMVSIETGKEVEWSSETNYHFRLSAFQERL 233 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDA 234 L Y++ FI P V+ V GL+DLS+SR + WGI +P D +YVW+DA Sbjct: 234 LDLYKT--GFITPTMYTTNVVKSVSEGLQDLSISRPAERLTWGIPVPGDNTQTVYVWLDA 291 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L NYLT GY P WPAD+HV+GKDI+RFH +YWPAFL++ +LPLP+ V HG Sbjct: 292 LVNYLTKAGYPFAPGQGSHLGWPADVHVVGKDIVRFHCVYWPAFLMALDLPLPRNVLVHG 351 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 EK+SKS GNV++P I GVD++R+FL+ + A D YD + + L Sbjct: 352 HWTMNREKMSKSTGNVVNPFFAINRFGVDSMRFFLIHQGALVGDADYDNAYIIRDYQKLL 411 Query: 355 ANGIGNLVSRSVSMI---LKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 G+GNL R++ L+ Y +G T +DE+ ++ V + I E M+N Sbjct: 412 QKGLGNLAHRAIGCAKGNLRTYIENGTCGRLPPATPADEAYETMLKDVPKRIAEQMENLN 471 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 AL ++ +L+ + ++YF +PW K+ DR ++ V E +R ILLQ +P Sbjct: 472 PRAALQEITTLIDQTNKYFHHAEPW---KSPNDRQRSIFNV-AESLRMAGILLQPVMPTK 527 Query: 470 ANKIFDILFV 479 AN++ D+ V Sbjct: 528 ANELLDMFHV 537 >gi|308062316|gb|ADO04204.1| methionyl-tRNA synthetase [Helicobacter pylori Cuz20] Length = 653 Score = 347 bits (889), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 193/473 (40%), Positives = 289/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F+D D ++ YD FIRTT+ H + +K + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFKIMFEKGDIYKGVY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + D +EEE YFFRL+AY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLNAYEKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+ D F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNGLDNKMVHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKL 472 >gi|217034348|ref|ZP_03439764.1| hypothetical protein HP9810_491g41 [Helicobacter pylori 98-10] gi|216943233|gb|EEC22700.1| hypothetical protein HP9810_491g41 [Helicobacter pylori 98-10] Length = 645 Score = 347 bits (889), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 193/473 (40%), Positives = 290/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F+D D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + D +EEE YFFRLSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL++ D F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNDLDNKMVHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITVYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKL 472 >gi|317014423|gb|ADU81859.1| methionyl-tRNA synthetase [Helicobacter pylori Gambia94/24] Length = 650 Score = 347 bits (889), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 194/473 (41%), Positives = 291/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F++ D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + D +EEE YFF+LSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILPI R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+ D A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNGLDNKMAHFERAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNYSLKS-AKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNIY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + V+ Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANVLLQSSFLLYAFMPKSAMKL 472 >gi|308184777|ref|YP_003928910.1| methionyl-tRNA synthetase [Helicobacter pylori SJM180] gi|308060697|gb|ADO02593.1| methionyl-tRNA synthetase [Helicobacter pylori SJM180] Length = 650 Score = 347 bits (889), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 199/517 (38%), Positives = 309/517 (59%), Gaps = 20/517 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F+D D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + D +EEE YFF+LSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILPI R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL++ D A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNDLDNKMAHFERAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-------QLIHRAL 414 ++R + M K ++ ++ + I + + L+++ + + N +H+AL Sbjct: 361 LNRLLGMAKKYFN--------YSLKSDKITAYYPKELEKVHQILDNANSFVPKMQLHKAL 412 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ ++ +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 413 EELFNVYDFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAMKL 472 Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V ++ + K M+ + +P+F + Sbjct: 473 ASAFCVEITPNNYERFFKAKKLQDMILQDTEPLFSKM 509 >gi|158523214|ref|YP_001531084.1| methionyl-tRNA synthetase [Desulfococcus oleovorans Hxd3] gi|158512040|gb|ABW69007.1| methionyl-tRNA synthetase [Desulfococcus oleovorans Hxd3] Length = 640 Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 189/467 (40%), Positives = 264/467 (56%), Gaps = 12/467 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I Y NA+PH+GHAY I+ADV ARFH + G V F TGTDEHG KI KAA G Sbjct: 5 FYITTPIYYVNAKPHLGHAYTTIMADVAARFHAMAGKKVFFLTGTDEHGDKIMKAAAARG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 V+ K + D S FRD+ LDI Y FIRTT++ H + I + GDIY Y G Sbjct: 65 VSPKAYADTISALFRDLWTELDIGYSHFIRTTDENHKQVVSRVLAAIYEAGDIYFSEYEG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y E +Y + E+ G + P + ++E YFF++S YQ L+ + +P+F Sbjct: 125 LYCFGCERFYTERELVNGKCPDH----DTPPERIQEANYFFKMSKYQQWLIDHITDNPDF 180 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P R E++SF+K L DL +SR T DWGI +P D +Y+ YVW DAL NY++ GY Sbjct: 181 IRPEGYRTEILSFLKEPLDDLCISRPTSRLDWGIPLPFDDRYVTYVWFDALLNYVSALGY 240 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D D FWPA H+ KDI++ H IYWP L +A +PL + HGF + K+S Sbjct: 241 PD--DDRYMTFWPAVQHLTAKDIIKPHGIYWPIMLKAAGIPLYNHLNVHGFWQIESCKMS 298 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSLGNV++P+++ G DA RYFL RE++ G D + ++ L +R+NADLAN +GNL SR Sbjct: 299 KSLGNVVNPLDMKNTYGTDAFRYFLCREMSFGLDAGFSEEALVQRINADLANDLGNLFSR 358 Query: 365 SVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 ++M K + +P D I ++ + M ++RALA V L+S Sbjct: 359 VLAMTAKYFKNRVPAADDANLPPCDIDIGALARTTVAAYEAQMATFHMNRALAAVWDLIS 418 Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVP 467 ++R+ D PW L K D + V+Y +E +R +A L+ +P Sbjct: 419 AMNRFIDYSAPWTLAKDPAKADALAAVIYTLLEGLRIVAGLVYPVMP 465 >gi|189485353|ref|YP_001956294.1| methionyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287312|dbj|BAG13833.1| methionyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 512 Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 193/477 (40%), Positives = 284/477 (59%), Gaps = 15/477 (3%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I Y N PHIGH+Y I +D++AR+ RL G DV F TGTDEHG KI AA+ Sbjct: 2 KFYITTPIYYANDIPHIGHSYTTIASDIMARWKRLKGFDVFFLTGTDEHGAKIVAAAKKK 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G + D+ S F++ ++L+ISY DFIRTTE++H + + + DKG I+K Y Sbjct: 62 GEIPQKLCDKMSAKFKEAWELLNISYTDFIRTTERKHFVSVEKILSILFDKGFIFKKKYE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL-----SYY 180 Y + E +Y ++ + ++ + PV EE YFFRLS++Q+ L+ + + Sbjct: 122 ELYCIGCERFYAQKDLDENGCCPFHKTK--PVL-QSEENYFFRLSSFQNALIDRIVDANH 178 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 H E I P ERRNE+I +K GL+D+S SR +WGI +P D YVW+DAL NY+T Sbjct: 179 REHIE-IQPEERRNEIIGKLKLGLEDVSFSRSAVEWGIPLPFDGGQTAYVWVDALINYIT 237 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY +N + K+WPAD+H++ KDIL FH++ WPA L+ A LPLPKK++SHGF G Sbjct: 238 GVGYQEN-ETKFQKYWPADIHLMAKDILWFHSVIWPAILMGAGLPLPKKLYSHGFFTLNG 296 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKSLGNV+ P E++++ GVDA RY I G DG L + N DLAN +GN Sbjct: 297 NKMSKSLGNVVSPRELVDKYGVDAARYLAATIIPFGPDGDISWQRLTLKYNTDLANNLGN 356 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 L+SR++ M K ++ +P T D E + V + + ++ NM N H+A + S Sbjct: 357 LISRTLKMAEKYFNLYVPQ----TIPDLELVRKVVTVLKKKFALNMDNMQFHKAAETLQS 412 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 ++ V+R + PW+L KT+ D+ ++ +Y ++ + + L F+P +A KI+ I Sbjct: 413 AITLVNRQIEIDAPWKLAKTDTDKLASCIYAYLQSADIIIMHLLPFMPTMAEKIWQI 469 >gi|242036539|ref|XP_002465664.1| hypothetical protein SORBIDRAFT_01g043330 [Sorghum bicolor] gi|241919518|gb|EER92662.1| hypothetical protein SORBIDRAFT_01g043330 [Sorghum bicolor] Length = 597 Score = 346 bits (888), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 196/527 (37%), Positives = 298/527 (56%), Gaps = 36/527 (6%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E ++T + Y NA PH+G AY I AD +ARF RL +V+F TGTDEHG+KIA +A+ Sbjct: 59 EPYVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLQEKNVIFITGTDEHGEKIAASAEA 118 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 +G K D S +++ + LDI YD FIRTT+ +H + ++ + GDIY+ Y Sbjct: 119 SGRNPKEHCDAISSSYKTLWADLDIEYDKFIRTTDSKHEAVVNEFYSRVLNSGDIYRADY 178 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + E Y ++ E+ + P +E+ YFF LS YQ KL +P Sbjct: 179 EGLYCVSCEEYKDEKELL---ENNCCPVHLKPCVERKEDNYFFALSKYQHKLEELLTRNP 235 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +F+ P R NEV ++KSGL+D S+SR + +WGI +P+D + +YVW DAL Y++ Sbjct: 236 DFVRPSYRLNEVQGWIKSGLRDFSISRASVEWGIPVPNDTKQTIYVWFDALLGYISA--L 293 Query: 245 LDNPDGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 LD DG +A WPA LH+IGKDILRFHA+YWPA L+SA L +P VF HGF+ Sbjct: 294 LD--DGEQASLQQAVDHGWPASLHLIGKDILRFHAVYWPAMLMSAGLTVPDTVFGHGFLT 351 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 G K+ KSLGN ++P +++E G DA+RYF +RE+ G DG Y ++ VNA LAN Sbjct: 352 KDGMKMGKSLGNTLEPKDLVERFGADAVRYFFLREVEFGNDGDYSEERFINIVNAHLANT 411 Query: 358 IGNLVSRSVSMILKD------YDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLI 410 IGNL++R++ ++ K+ +D + G F ++ E++ + + + + +N L+ Sbjct: 412 IGNLLNRTLGLLKKNCKSKLAFDSIAAADGGLFRDNIENL-------VDKAKHHYENLLL 464 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKT---NPDRASTVLYVTVEVIRQLAILLQAFVP 467 A V+ + + + Y D Q PW K + ++A+ L + +E +R +AI L P Sbjct: 465 SSACETVLEIGNLGNLYIDEQAPWSCFKQGGESAEKAAKDLVLILETMRIIAIALSPITP 524 Query: 468 KLANKIFDIL-FVADENRCFQSLDQR---LKPGFMLHKTFDPIFPRF 510 L+ +I+ L F D+ R + D + LK G ++ + P+F R Sbjct: 525 SLSLRIYTQLGFTEDQFRLLRWEDTKWGGLKAGQVMSEP-KPVFARI 570 >gi|294054396|ref|YP_003548054.1| methionyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221] gi|293613729|gb|ADE53884.1| methionyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221] Length = 511 Score = 346 bits (888), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 190/520 (36%), Positives = 302/520 (58%), Gaps = 30/520 (5%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+TAI Y N PH+GHAYE ++ D++AR+ RL G +V F TG DEHGQK+ +AQ Sbjct: 3 KKFYITTAIDYANGSPHLGHAYEKVLTDIVARYRRLMGDEVKFLTGLDEHGQKVQMSAQK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + D+ + F+ + L IS DD+IRTT+ RH + + + + DKG+IYK Y Sbjct: 63 EGIAPQEICDRLAVEFQGVCGRLHISNDDYIRTTQARHKKVVQEILQTLYDKGEIYKAEY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+YS R E + + E G + + V+ + E YFF+L+ YQ+ L+ + +S+ Sbjct: 123 SGYYSQRQEQFVTEKEKVNGEWPEIFGE----VEEVIETNYFFKLAQYQEWLVDFIQSNE 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 + I P R +V+ F+K L DL +SR +WGI++P D ++ YVW DALTNY+T Sbjct: 179 DLIYPRFRSADVLQFLKEPLNDLCISRPKSRLEWGIELPFDTDFVTYVWFDALTNYITAA 238 Query: 243 GYLDNPDGSK--AKFWPADLHVIGKDIL-RFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GY G++ A+ WPAD HVIGKDIL HA+YWP L + ++ LPK HG+ L Sbjct: 239 GY-----GTEEFAQHWPADYHVIGKDILVPPHAVYWPIMLKALDIELPKHFLVHGWWLSS 293 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKS G+V++P+++IE+ G DA RYF+ RE+ G+D + D R N+DLAN +G Sbjct: 294 GAKMSKSTGDVVNPLDLIEQFGADAFRYFVTREMNVGQDSEFSLDLFMSRYNSDLANDLG 353 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLVSR ++M + + +P ++ + + E++ ++ H+AL ++ Sbjct: 354 NLVSRLLNMGGRYTEAKVPAASVNEAPEQELKKLWEATKDELQPLFESFQFHKALERIFG 413 Query: 420 LVSEVDRYFDAQKPWELKKTNP--DRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 +S +++Y + + PW+L K+ DRA T L E +R ++L +P +++++ Sbjct: 414 FISGINKYAETRAPWKLAKSEAPEDRARLETSLAYMAEALRLGVVMLTPVMPDISDRVRA 473 Query: 476 ILFVADENRCFQSLDQRLKPGFML------HKTFDPIFPR 509 ++ + F+ +D +L+ G L KT +FPR Sbjct: 474 LIGATN----FERIDGQLEWGETLAGQALGEKTI--LFPR 507 >gi|148242327|ref|YP_001227484.1| methionyl-tRNA synthetase [Synechococcus sp. RCC307] gi|147850637|emb|CAK28131.1| Methionyl-tRNA synthetase [Synechococcus sp. RCC307] Length = 510 Score = 346 bits (888), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 185/474 (39%), Positives = 262/474 (55%), Gaps = 10/474 (2%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y N +PHIG Y + D LARF RL G +V+F TG DEHGQKI + A++AG+ Sbjct: 5 LTTPLYYVNDKPHIGSVYTTLAVDTLARFKRLSGENVVFITGCDEHGQKIQRTAESAGID 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + DQ S F + IS D FIRTT+ RH + ++ GDI +G GWY Sbjct: 65 PQQHCDQISSTFASVWSQWQISNDRFIRTTDPRHQSIVEQFFARVEANGDIIEGRQQGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E Y +D K A + P++W +E FFRLS YQD + + FI Sbjct: 125 CVACEEYKDDP---KEAQSPHCPIHQKPLEWRDEANLFFRLSRYQDAIEKLIATE-GFIR 180 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P RR EV +FV +GL+D S+SR+ WG+ +P + YVW DAL Y+T D P Sbjct: 181 PASRRKEVENFVANGLRDFSISRRNVSWGLPVPGHDGHTFYVWFDALLGYITALLEPDQP 240 Query: 249 ---DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D + + WPA LHVIGKDILRFHA+YWPA LSA + LP VF HGF+ +G+K+ K Sbjct: 241 ATLDQALSNGWPAQLHVIGKDILRFHAVYWPAMCLSAGIDLPTGVFGHGFLTREGQKMGK 300 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S+GN IDP ++E G DA+R++L+R+I G DG + L VN DLAN IGNLV+RS Sbjct: 301 SMGNSIDPTRLVELCGRDAVRWYLLRDIQFGDDGDIQQQRLLDLVNNDLANTIGNLVNRS 360 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 +SM K ++G+ P S+ + + ++ + Q H Q + L + Sbjct: 361 ISMARKWFEGVPSLPQELP-SNHPLKQAAQAAVADVASHYQELRFHAVAEQALQLAIAAN 419 Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y Q PW+ K N D+ + LY +E R + ++LQ +P+ + ++ L Sbjct: 420 GYLSDQAPWKAIKDPANRDQVAADLYAVLEASRVVGVVLQPLLPEFSERLLQQL 473 >gi|330799736|ref|XP_003287898.1| hypothetical protein DICPUDRAFT_152073 [Dictyostelium purpureum] gi|325082101|gb|EGC35595.1| hypothetical protein DICPUDRAFT_152073 [Dictyostelium purpureum] Length = 566 Score = 346 bits (887), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 184/516 (35%), Positives = 282/516 (54%), Gaps = 36/516 (6%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++K+ I+T I Y N PHIGH Y ++ D AR++R G D F TGTDEHG K+ +AA+ Sbjct: 33 KKKILITTPIFYVNGPPHIGHLYTALLGDAFARWNRFKGNDTYFMTGTDEHGMKVDEAAK 92 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ T + D S F+++ + +I YDDFIRTTE RH D +W ++ +KG IYKG Sbjct: 93 KKGLKTIDYCDSISNRFKELFKLSEIQYDDFIRTTEPRHRDAVTAMWNRLLEKGYIYKGV 152 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--------------WMEEEGYFFRL 169 Y GWY DE++ DD+V +G N NPV W+EEE Y F+L Sbjct: 153 YKGWYCTSDESFLTDDQVMEGMSPITPN---NPVSKKCMVSKESGHEVTWVEEENYMFKL 209 Query: 170 SAYQDKLLSYYES-HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQY 226 S + K+ ++ + +P I P ++++ + G++DLS+SR + WGI +P+DP Sbjct: 210 SEFASKVENWIQDLNP--IFPATHTKQLLAMISQGVRDLSISRPSSRITWGIPVPNDPSQ 267 Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 +YVW+DALTNYLT TGY + +W H+IGKDI++FH +YWP+FL++A P+ Sbjct: 268 TIYVWLDALTNYLTVTGYPKVDPNDPSSYWSNTHHIIGKDIIKFHCLYWPSFLMAAEYPV 327 Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 K V H EK+SKS GNV+DP E I+ G++ +RYFL++ DG + + Sbjct: 328 QKGVLCHAHWTVNREKMSKSRGNVVDPFESIQNYGLEVIRYFLLKGGGLEDDGDWSDHEI 387 Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIP-------TPGAFTESDESILSVCSRVLQ 399 R+ ADLA+ GNL+SR L G P + TE D +L+ C +++ Sbjct: 388 SVRLKADLADTYGNLLSRCTGKPLHP-SGHWPKSVNLDESSTLLTEKDIQLLNHCKKLIN 446 Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK------KTNPDRASTVLYVTVE 453 N + ++++ + + + Y QKPW L +P R +T++Y+ +E Sbjct: 447 GATVNFDKGDFKNGIYEILAFLYDCNGYIQEQKPWTLAPKPNRPNADPVRLNTIMYIALE 506 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489 +IR ++LL +P A + L + + R Q+L Sbjct: 507 MIRIASLLLLPVIPSSATLALNQLDIPLDQRNHQNL 542 >gi|72382182|ref|YP_291537.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A] gi|72002032|gb|AAZ57834.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A] Length = 516 Score = 346 bits (887), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 188/490 (38%), Positives = 287/490 (58%), Gaps = 16/490 (3%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K I+T + Y N +PH+G +Y I D +ARF RL+G VLF TG DEHGQKI + A++ Sbjct: 4 KYTITTPLYYVNDKPHLGSSYTTIACDAIARFERLNGNTVLFLTGVDEHGQKIERTAESK 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + ++ D+ + ++ + D L+ISYD F+RTT H + K+ D+Y G S Sbjct: 64 NLEPQLHCDEITEKYKYLWDKLNISYDRFVRTTSIEHTSLVHQFYSKVLKSDDVYMGRQS 123 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY + E Y + ++ K + + ++W +EE FF+LS YQD++ Sbjct: 124 GWYCVGCEEYKDVEDKDKSPICSIHKKE---LEWRDEENLFFKLSKYQDQIEKLIHVDG- 179 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P R+NE+I+FV GL+D S+SR WGI +P + + YVW DAL Y++ G L Sbjct: 180 FISPKSRKNEIINFVSKGLRDFSISRVNLKWGINVPGNKDHTFYVWFDALLGYVS--GSL 237 Query: 246 DN---PDGSKAKF--WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 ++ P+ ++ WPA++HVIGKDILRFHA+YWPA LLSA + P+ VF HGF+ +G Sbjct: 238 NDQCSPELTEKSLSNWPANIHVIGKDILRFHAVYWPAMLLSAGMKTPRSVFGHGFLTREG 297 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+ KSLGNV+DPIE++E G+DA+R++L+R+I G+DG + VN+DL N IGN Sbjct: 298 QKMGKSLGNVLDPIELLEYGGIDAMRWYLLRDIEFGEDGDFQMRRFVDIVNSDLCNTIGN 357 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV-LQEIRENMQNQLIHRALAQVIS 419 L++R+++M K + IP T S +S L V S + E E+ ++ + +I Sbjct: 358 LLNRTITMSKKWFKENIPIDN--TLSSDSTLKVKSETKIIEYMESFKDSNFKSSANAIID 415 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L + + Y + + PW+L K +N + + +Y +E R + ILL VP L+N+I L Sbjct: 416 LANSANLYLNDRAPWKLIKDISNKNIVALDIYSVLESCRIIGILLNPIVPNLSNRILKQL 475 Query: 478 FVADENRCFQ 487 + N F+ Sbjct: 476 NIDTSNINFK 485 >gi|115451471|ref|NP_001049336.1| Os03g0209600 [Oryza sativa Japonica Group] gi|108706784|gb|ABF94579.1| Methionyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica Group] gi|113547807|dbj|BAF11250.1| Os03g0209600 [Oryza sativa Japonica Group] gi|215697057|dbj|BAG91051.1| unnamed protein product [Oryza sativa Japonica Group] gi|222624429|gb|EEE58561.1| hypothetical protein OsJ_09866 [Oryza sativa Japonica Group] Length = 602 Score = 346 bits (887), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 191/516 (37%), Positives = 290/516 (56%), Gaps = 22/516 (4%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y NA PH+G AY I AD +ARF RL V+F TGTDEHG+KIA +A+ G Sbjct: 65 LTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLDKRVVFITGTDEHGEKIATSAEACGRN 124 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 K D S +++ + LDI YD FIRTT+++H + ++ D GDIY+ Y G Y Sbjct: 125 PKDHCDTISNSYKMLWADLDIEYDKFIRTTDRKHEAVVNDFYSRVLDSGDIYRADYEGLY 184 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E Y ++ E+ + + P +E+ YFF LS YQ +L +P F+ Sbjct: 185 CVSCEEYKDEKEL---GENKCCPVHLKPCVPRKEDNYFFALSKYQHQLEDLLTKNPNFVR 241 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P R NEV +VKSGL+D S+SR + +WGI +P+D + +YVW DAL Y++ LD Sbjct: 242 PSHRLNEVQGWVKSGLRDFSISRASVEWGIPVPNDTKQTIYVWFDALLGYIS--ALLD-- 297 Query: 249 DGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 DG KA WPA LH+IGKDILRFHA+YWPA L+SA + +P VF HGF+ G Sbjct: 298 DGEKASLQQAVERGWPASLHLIGKDILRFHAVYWPAMLMSAGISVPDAVFGHGFLTKDGM 357 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+ KSLGN ++P +++ GVD++RYF +RE+ G DG Y ++ VNA LAN IGNL Sbjct: 358 KMGKSLGNTLEPKDLVNRFGVDSVRYFFLREVEFGNDGDYSEERFINIVNAHLANTIGNL 417 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R++ ++ K+ + S+ ++ + ++ +N L+ A ++ + Sbjct: 418 LNRTLGLLKKNCKSTLAFDSIAAADGISLKDNVENLVDKAKDQFENLLLSSACETLMEIG 477 Query: 422 SEVDRYFDAQKPWELKKT---NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL- 477 + + Y D Q PW K + ++A+ L + +E +R +AI L P L+ +I+ L Sbjct: 478 NLGNLYIDEQAPWSCFKQGGESAEKAAKDLVIILETMRIIAIALSPITPSLSLRIYTQLG 537 Query: 478 FVADENRCFQSLDQR---LKPGFMLHKTFDPIFPRF 510 F D+ R + D + LK G ++ + P+F R Sbjct: 538 FTEDQFRTLRWEDTKWGGLKAGQVMMEP-KPVFARI 572 >gi|82245502|sp|Q90YI3|SYMM_TAKRU RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName: Full=Methionine--tRNA ligase 2; AltName: Full=Mitochondrial methionine--tRNA ligase; Short=MtMetRS; Flags: Precursor gi|15020809|emb|CAC44631.1| putative methionyl tRNA synthetase [Takifugu rubripes] Length = 590 Score = 346 bits (887), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 189/507 (37%), Positives = 280/507 (55%), Gaps = 23/507 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E YI+T I Y NA PH+GH Y +IAD R +L G + F TGTDEHG KI +AA Sbjct: 40 ENRNYYITTPIFYVNASPHLGHLYSAVIADCFHRHKQLQGFNSRFATGTDEHGLKIQQAA 99 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + AG F S FR + +IS D+IRTTE+RHH + W + KG IYKG Sbjct: 100 EAAGKEPLEFCTTVSERFRHLFSSCNISNTDYIRTTEQRHHRAVQHFWSVLCSKGLIYKG 159 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWYS +DE++ +V D + + V+WM+EE Y FRLS ++ +LL Sbjct: 160 SYEGWYSTQDESFLTPSQVTTALDSTGKEIKVSLESGHKVEWMKEENYMFRLSGFRSQLL 219 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235 + +P I P + V+ +++ L DLS+SR+ WGI +P+D +YVW+DAL Sbjct: 220 DWLRENPRAIQPERFHHSVLQWLQEELPDLSVSRQKSRLQWGIPVPEDDGQTIYVWLDAL 279 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYLT GY +N + ++W H+IGKDIL+FHAIYWP+FLL A LPLP+ + H Sbjct: 280 VNYLTVVGYPNNHE----RWWNVAHHIIGKDILKFHAIYWPSFLLGAGLPLPQTIHVHSH 335 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 G+K+SKSLGNVIDP E + D LRYFL+R+ D Y D + K +NA+LA Sbjct: 336 WTVAGKKMSKSLGNVIDPQERSQLFTTDGLRYFLLRQGVPDTDCDYRDDKVVKLLNAELA 395 Query: 356 NGIGNLVSRSVSMILKD---YDGMIPTP------GAFTESDESILSVCSRVLQEIRENMQ 406 + +G L++R + L Y P G + D +L + + ++ + Sbjct: 396 DALGGLLNRCTATALNPAQVYASFCPDSFPRERGGRADDDDYRMLESVRHLPAVVEQHFE 455 Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA--STVLYVTVEVIRQLAILLQ 463 + +++AL V + V + + + PW+L +K + D+ T+++V++E +R LLQ Sbjct: 456 DMHVYKALEAVSTCVRQTNGFVQRHAPWKLDRKDSADQRWLGTIIHVSLECLRIYGTLLQ 515 Query: 464 AFVPKLANKIFDILFVADENRCFQSLD 490 VP+++NK+ L V R + +L+ Sbjct: 516 PVVPEISNKLLSRLGVQPHERSWTNLN 542 >gi|124025722|ref|YP_001014838.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A] gi|123960790|gb|ABM75573.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A] Length = 516 Score = 345 bits (886), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 188/490 (38%), Positives = 286/490 (58%), Gaps = 16/490 (3%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K I+T + Y N +PH+G +Y I D +ARF RL+G VLF TG DEHGQKI + A++ Sbjct: 4 KYTITTPLYYVNDKPHLGSSYTTIACDAIARFERLNGNTVLFLTGVDEHGQKIERTAESK 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + ++ D+ + ++ + D L+ISYD F+RTT H + K+ D+Y G S Sbjct: 64 NLEPQLHCDEITEKYKYLWDKLNISYDRFVRTTSIEHTSLVHQFYSKVLKSDDVYMGRQS 123 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 GWY + E Y + ++ K + + ++W +EE FF+LS YQD++ Sbjct: 124 GWYCVGCEEYKDVEDKDKSPICSIHKKE---LEWRDEENLFFKLSKYQDQIEKLINVDG- 179 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 FI P R+NE+I+FV GL+D S+SR WGIK+P + + YVW DAL Y++ G L Sbjct: 180 FISPKSRKNEIINFVSKGLRDFSISRVNLKWGIKVPGNKDHTFYVWFDALLGYVS--GSL 237 Query: 246 DN---PDGSKAKF--WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 ++ P+ ++ WPA+ HVIGKDILRFHA+YWPA LLSA + P+ VF HGF+ +G Sbjct: 238 NDQCSPELTEKSLCNWPANRHVIGKDILRFHAVYWPAMLLSAGMKTPRSVFGHGFLTREG 297 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+ KSLGNV+DPIE++E G+DA+R++L+R+I G+DG + VN+DL N IGN Sbjct: 298 QKMGKSLGNVLDPIELLEYGGIDAMRWYLLRDIEFGEDGDFQMRRFVDIVNSDLCNTIGN 357 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV-LQEIRENMQNQLIHRALAQVIS 419 L++R+++M K + IP T S +S L V S + E E+ ++ + +I Sbjct: 358 LLNRTITMSKKWFKENIPIDN--TASSDSTLKVQSETKIIEYMESFKDSNFKSSANAIID 415 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L + + Y + + PW+L K +N + + +Y +E R + ILL VP L+ +I L Sbjct: 416 LANSANLYLNDRAPWKLIKDISNKNVVALDIYSVLESCRIIGILLNPIVPNLSTRILKQL 475 Query: 478 FVADENRCFQ 487 + N F+ Sbjct: 476 NIDTSNINFK 485 >gi|241842777|ref|XP_002415428.1| methionyl-tRNA synthetase, putative [Ixodes scapularis] gi|215509640|gb|EEC19093.1| methionyl-tRNA synthetase, putative [Ixodes scapularis] Length = 522 Score = 345 bits (886), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 189/509 (37%), Positives = 300/509 (58%), Gaps = 27/509 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQ 63 + +I+T I Y NA PH+GH + +++AD L R HRL +F+TGTDEHG KI +AA Sbjct: 5 RYFITTPIFYVNAGPHLGHHHTVVLADSLHRLHRLLAPSSPTIFSTGTDEHGLKIQQAAS 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 A F ++ S+ F+D+ D I+Y D++RTTE+RH R W+ + K IY G Sbjct: 65 KAKQDELSFCNRISKQFKDLFDSTSITYTDYVRTTEERHKACVRHFWEVLQKKEHIYTGT 124 Query: 124 YSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 Y GWYS ++E + +D E+ + G + +PV+WMEE+ Y FRLS +QD L+ Sbjct: 125 YKGWYSTQEELFLSDSEIKEVPKEDGTPQKVSIESGHPVEWMEEKNYVFRLSRFQDDLIH 184 Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALT 236 + +S P + P + ++ ++ ++++GL+DLS+SR++ WGI +P D +YVW+DAL Sbjct: 185 WLKS-PGVVKPAKFQDLLVHWIRAGLQDLSVSRQSSRVKWGIMVPGDETQTIYVWLDALV 243 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NYLT +GY P+ S WP D HVIGKDIL+FH IYWPAFL++A L P+ + H Sbjct: 244 NYLTVSGY-PGPNHS----WPPDCHVIGKDILKFHGIYWPAFLIAAGLEPPRSILCHSHW 298 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 EK+SKS GNV+ P++ +++ D +RYFL+RE DG ++ +++ +NA+LA+ Sbjct: 299 TVNNEKMSKSKGNVLCPVKKVDKYTADGIRYFLLREGVPHSDGNFNSVKVQRLLNAELAD 358 Query: 357 GIGNLVSRSVSMILKDYDGMIPT--PGAFTE--SDESILSVCSRVLQEIRENMQNQLIHR 412 +GNL+SR + ++ + + P +F E + +L + +++ I++ Sbjct: 359 TLGNLLSRCTAPLV-NKQQIFPAYNSKSFEELPDGQKVLVELQGLPDKVKARYLEGNIYQ 417 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKL 469 L +V+ ++ + KPWEL K+ PD R VL++ +EV+R AI+LQ +P L Sbjct: 418 GLDEVMHVLRRTNAVVQDAKPWELAKS-PDAGHRLDAVLHMALEVLRVSAIVLQPVIPVL 476 Query: 470 ANKIFDILFVADENR---CFQSLDQRLKP 495 + +I D L V + R C ++ D R +P Sbjct: 477 STRILDKLQVGGDERTWSCAETPDVRQRP 505 >gi|217032293|ref|ZP_03437790.1| hypothetical protein HPB128_142g41 [Helicobacter pylori B128] gi|298735963|ref|YP_003728488.1| methionyl-tRNA synthetase [Helicobacter pylori B8] gi|216946059|gb|EEC24672.1| hypothetical protein HPB128_142g41 [Helicobacter pylori B128] gi|298355152|emb|CBI66024.1| methionyl-tRNA synthetase [Helicobacter pylori B8] Length = 650 Score = 345 bits (886), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 192/473 (40%), Positives = 291/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F++ D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + +D +EEE YFF+LSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKADNTSDKVLCPDCLRETALLEEESYFFKLSAYEKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILPI R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL++ D A F H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNDLDNKMAHF-ECTRHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNYSLKS-AKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAVKL 472 >gi|254779595|ref|YP_003057701.1| methionyl-tRNA synthetase [Helicobacter pylori B38] gi|254001507|emb|CAX29525.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) [Helicobacter pylori B38] Length = 650 Score = 345 bits (886), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 193/473 (40%), Positives = 290/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F++ D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + D +EEE YFF+LSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILPI R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+ D A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNGLDNKMAHFECAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNYSLKS-AKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKL 472 >gi|317009649|gb|ADU80229.1| methionyl-tRNA synthetase [Helicobacter pylori India7] Length = 650 Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 197/510 (38%), Positives = 304/510 (59%), Gaps = 6/510 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F++ D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + +D +EEE YFF+LSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKTDNTSDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLDFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILPI R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+ D A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNGLDNKMAHFECAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKLAIEYGIEELRYFLLREVPFGQDGDFSKKALTERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNYSLKS-AKITAYYPKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ + Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKLANAFNTE 479 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 ++ + K M+ + +P+F + Sbjct: 480 ITPNNYERFFKAKKLQDMILQDTEPLFSKM 509 >gi|320352452|ref|YP_004193791.1| methionyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] gi|320120954|gb|ADW16500.1| methionyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] Length = 648 Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 202/499 (40%), Positives = 290/499 (58%), Gaps = 16/499 (3%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I Y NA PH+GHAY I+ D +RF RL G V F TGTDEHG+KIA+AA AG Sbjct: 4 YVTTPIYYVNALPHLGHAYTTIVTDTYSRFRRLCGDTVRFQTGTDEHGEKIAEAAAKAGE 63 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + +VD+ S F+D VL I D IRTT+ H T + + +++ GDIY YSG Sbjct: 64 SPREYVDRISAAFKDTWPVLAIQPDKIIRTTDADHVRTVQAILQQVHASGDIYFSEYSGL 123 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E + + E+ DG+ + P + + E+ YFFR+S YQD L+ + + HP+FI Sbjct: 124 YCKGCERFLTEKEL---VDGKCPDHLVEP-KAITEQNYFFRMSKYQDWLIEHIQRHPDFI 179 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 P RNEV+SF+ L+DL +SR T WGI +P D ++ YVW DAL NYLT GY Sbjct: 180 TPERYRNEVLSFLSEPLEDLCISRPTSRLTWGIPLPFDQNFVTYVWFDALINYLTGIGYP 239 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D+P+ A +W HVI KDIL+ HAIYWP L + L +++ HG+ K+SK Sbjct: 240 DSPE--FAMYWAEAEHVIAKDILKPHAIYWPTMLRAMGLEPYRRLHVHGYWNVDATKMSK 297 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGNV+ P E++E GVD +RYF++RE++ G D + D + R NADLAN +GNL SRS Sbjct: 298 SLGNVVRPRELVETYGVDTVRYFVLREMSFGLDSSFSSDAILARHNADLANDLGNLFSRS 357 Query: 366 VSMILKDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 ++MI K G +P P F D ++S + + +ENM H+AL + ++ Sbjct: 358 LTMIDKYAAGRVPEPETAALFAPEDRELMSAIAAMFDHYQENMAAFTFHKALQAIWEVIG 417 Query: 423 EVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 ++RY PWEL K PD+A TVL E + ++A++L +P A+++ L + Sbjct: 418 LLNRYIVTHAPWELAK-QPDQAGRLRTVLAFLAESLWKIALVLGPIMPDTASRMAAALGM 476 Query: 480 ADENRCFQSLDQRLKPGFM 498 E +LD+ K G++ Sbjct: 477 GTEFASV-TLDEARKWGYI 494 >gi|321468691|gb|EFX79675.1| hypothetical protein DAPPUDRAFT_319387 [Daphnia pulex] Length = 558 Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 195/495 (39%), Positives = 274/495 (55%), Gaps = 18/495 (3%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-VLFTTGTDEHGQKIAKA 61 + E +I+T I Y NA+PHIGH Y ++AD ARFHRL G V+F+TGTDEHG KI +A Sbjct: 39 KNEPYFITTPIFYVNAEPHIGHVYTAVLADSSARFHRLIGCSPVVFSTGTDEHGLKIQQA 98 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + A F DQ S F++ D +I Y D+IRTTE RH + W +SDKG IYK Sbjct: 99 SLQANKDPSQFCDQVSVLFKNALDECEIGYTDYIRTTENRHKENVHSFWNILSDKGYIYK 158 Query: 122 GCYSGWYSLRDEAYYNDDE--VYKGADG--QYYNAQHN-PVQWMEEEGYFFRLSAYQDKL 176 G Y GWY DE + +D+ + K DG Q + + N PV+W EE Y F+LS + +L Sbjct: 159 GKYEGWYCTADETFVTEDQTTLLKLPDGREQRVSTESNRPVEWFSEENYLFKLSKLRGEL 218 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDA 234 L + S P + P+ N V S+++ L DLS+SR WGI +P+DP +YVW+DA Sbjct: 219 LKWLISGP-VVRPVRHYNLVKSWLEQDLVDLSVSRPRARLSWGIPVPEDPSQTIYVWLDA 277 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L NY+T + S WP +HVIGKDIL+FH+IYWPAFLL+A PK + HG Sbjct: 278 LLNYMTVAKH----SHSDKNIWPPSVHVIGKDILKFHSIYWPAFLLAAGFDPPKCLLVHG 333 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 L +K+SK+ GNV+ P I+ LRYFL+ E DG + L + N++L Sbjct: 334 HWLADDQKMSKTTGNVVSPQSCIDIATATGLRYFLLHEGVPASDGNFSMTKLVRIANSNL 393 Query: 355 ANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDE---SILSVCSRVLQEIRENMQNQLI 410 A+GIGNLV+R L + +P F +L + R + E Sbjct: 394 ADGIGNLVNRCCGKNLNPSQIRLAVSPSDFEACGSPGLELLDLLQRTPDIVYEEYLQWNF 453 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKL 469 ++ + Q+++LV + +F +PW+LKK D+ + L +T+E R + LLQ VP Sbjct: 454 YKGIDQIMALVRGANGFFQTMEPWKLKKEGKIDKLNASLAITMETARVVGTLLQPIVPSY 513 Query: 470 ANKIFDILFVADENR 484 + ++ D L V ENR Sbjct: 514 SERLLDKLGVPRENR 528 >gi|237751267|ref|ZP_04581747.1| methionyl-tRNA synthetase [Helicobacter bilis ATCC 43879] gi|229372633|gb|EEO23024.1| methionyl-tRNA synthetase [Helicobacter bilis ATCC 43879] Length = 663 Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 207/536 (38%), Positives = 299/536 (55%), Gaps = 45/536 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K ++T I Y N PHIGHAY I+ADV+ ++ L G DV F TGTDEHGQKI +AA+ Sbjct: 2 KKLLTTPIYYVNDVPHIGHAYTTILADVMKKYWTLRGNDVFFLTGTDEHGQKIEEAAKKH 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ T + + S FRD DI YD FIRTT H + + ++ + D+GDIYKG Y Sbjct: 62 GIKTIEYANSISEKFRDTWREYDIDYDKFIRTTYFEHILSVQKAFEIMYDRGDIYKGAYE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYY--NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 G Y + E+++ +V DG Y + + ++EE YFF LS YQDKLL++Y + Sbjct: 122 GMYCVGCESFFTQTQV---IDGIYCPDCSGKKETRLVKEESYFFALSKYQDKLLAWYREN 178 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLT 240 P+ I+P +RNEVI FV+ GL+DLS++R +F+WGIKIP D ++I+YVW+DAL NY + Sbjct: 179 PDCIVPSHKRNEVIKFVEQGLQDLSITRISFEWGIKIPLKLRDSKHIIYVWLDALMNYAS 238 Query: 241 TTGY-LD--------------NPD-GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 GY LD NP SK +++ H++GKDILRFHAIYWPAFL+S +L Sbjct: 239 ALGYGLDYNNAKEQLSYKMEQNPCLESKMEYFNNTTHIVGKDILRFHAIYWPAFLMSLDL 298 Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 PLPK + HG+ G K+SKS+GNVI P+++ D RYFL+RE+ G+DG + + Sbjct: 299 PLPKHILVHGWWTIDGVKMSKSIGNVIHPLDIKNAYPTDIFRYFLLREVPFGQDGDFSQI 358 Query: 345 GLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILSVCSR 396 L R N +L+N +GNL++R + M + K YD A+ E I SR Sbjct: 359 ALINRNNGELSNDLGNLLNRLIGMSEKYFQFDLSKSYD-----ENAYISQKEEI----SR 409 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVI 455 ++ + M + H+ L V L + PWEL K L + ++ Sbjct: 410 IINQSLAYMDSMQPHKFLESVWELFYLANTMITQIAPWELMKQEKSIECKAFLNLIANIL 469 Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPR 509 + A+LL +P +I L ++ +++ F +L Q FM+ K +FP+ Sbjct: 470 AKAALLLYPILPNSCKEISKALNISIDSKQFDTLIIKQGYIQDFMIQKVC-VLFPK 524 >gi|126326777|ref|XP_001379390.1| PREDICTED: similar to methionine-tRNA synthetase 2 [Monodelphis domestica] Length = 605 Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 190/522 (36%), Positives = 283/522 (54%), Gaps = 39/522 (7%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD----------VLFTTGTD 52 E ++ +T I Y NA PHIGH Y ++AD LAR+ RL V F+TGTD Sbjct: 46 ESGRVCFTTPIFYVNAAPHIGHLYSALLADALARYCRLRAAAPPVTSPAAPLVRFSTGTD 105 Query: 53 EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112 EHG KI +AA AG+T D+ S FR + IS DF+RTTE RH W+ Sbjct: 106 EHGLKIQQAATAAGLTPSELCDRVSAQFRALFQEAGISITDFLRTTEARHRRAVHHFWEV 165 Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVY--KGADGQYYNA---QHNPVQWMEEEGYFF 167 + +G +YKG Y GWY +E + D +V G +GQ + +PV WM+EE Y F Sbjct: 166 LHARGLLYKGLYEGWYCASEECFLPDGKVTWRPGPNGQSHPVALDSGHPVCWMKEENYIF 225 Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQ 225 RLS +++ L + + P+ I P R+ V+ +++ L DLS+SR WG+ +P DP Sbjct: 226 RLSQFREPLRQWLQDDPQAITPDPFRSTVLKWLEEDLPDLSVSRSNSHLYWGLPVPGDPT 285 Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285 +YVW+DAL NYLT GY PD + +WPA H+IGKDIL+FHAIYWPA LL A + Sbjct: 286 QTIYVWVDALVNYLTVIGY---PDSEQEAWWPATHHIIGKDILKFHAIYWPALLLGAGMT 342 Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345 P +++ H G+K+SKSLGNV+DP+ +++ VD RYFL+R+ D Y + Sbjct: 343 PPHRIYVHSHWTVHGQKMSKSLGNVVDPLSCLDQFTVDGFRYFLLRQGVPNWDCDYYEKK 402 Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---------------TPGAFTESDESI 390 + K ++A+LA+ +G L++R + L G+ P P D ++ Sbjct: 403 VVKLLDAELADALGGLLNRCTATSLNP-TGIFPVFSTSCFPSMEDIMAAPTKAQPEDYAL 461 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TV 447 + S + ++ +N I++AL V + V + + + PW+L + N A TV Sbjct: 462 VKAVSALPLQVENYYENFQIYKALEAVSTCVRQTNGFVQRNAPWKLNRENLADAQWLDTV 521 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489 L+VT+E +R +LLQ P LA+K+ L +++ R Q++ Sbjct: 522 LHVTLECLRVFGLLLQPVTPALADKLLSRLGISETERGLQNI 563 >gi|226355830|ref|YP_002785570.1| methionine--tRNA ligase [Deinococcus deserti VCD115] gi|226317820|gb|ACO45816.1| putative Methionine--tRNA ligase (Methionyl-tRNA synthetase) (MetRS) [Deinococcus deserti VCD115] Length = 668 Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 185/480 (38%), Positives = 278/480 (57%), Gaps = 11/480 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + +++TAI Y N PHIGH YE I+AD + R+ RL G +V F GTDEHG+KI+K Sbjct: 1 MTANNEFFLTTAIDYANGAPHIGHVYEKILADAIVRYQRLAGKNVTFVMGTDEHGEKISK 60 Query: 61 AAQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AA G+T + VD S R F+ + D L ISY +FIRTTE RH + + +++ D GDI Sbjct: 61 AAAKEGLTPQALVDDLSVRAFKGLWDRLGISYSEFIRTTEGRHKRFVQDVLQRVYDSGDI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 Y Y G YS+ E Y + E+ +G DG + + +P + E YFFR+ YQ+ LL Sbjct: 121 YFAEYEGLYSVGAERYVTEKELVEGPDGVRRFPGDKDPPELRREANYFFRMEKYQEWLLG 180 Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALT 236 + +P+ I P RNEV+ +K + DLS+SR WG+++P D ++ YVW DAL Sbjct: 181 HLRENPDLIQPSGYRNEVLEMLKEPIGDLSISRPKNRVPWGVELPWDADHVTYVWFDALL 240 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 +YLT + W HVIGKDIL+ HA++WP L +A +P+ +K+ H I Sbjct: 241 SYLTPLVTRGVDESVSGLAW----HVIGKDILKPHAVFWPTMLKAAGMPVYRKLVVHSHI 296 Query: 297 LHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 L + G K+ KSLGN IDP +++ + VDA+RY ++RE D + + L R+N+DLA Sbjct: 297 LAEDGRKMGKSLGNAIDPEKLVADYPVDAIRYAMLREATLSADSPFGEGILVSRLNSDLA 356 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N +GNL+SR+VSMI K +G+IP PG + + I + + E+ + + ++ A+ Sbjct: 357 NDLGNLLSRTVSMIQKYREGVIPAPGQPADRERVIEAAAIALPGEVLRLVGDLKVNMAIE 416 Query: 416 QVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ V +++RY PW L K+ R TVLY E +R ++ L+A +P A ++ Sbjct: 417 AAMNFVRDLNRYIAESAPWNLAKSEETQGRLDTVLYTAAEGLRVASVCLEAVIPGKAREL 476 >gi|254443440|ref|ZP_05056916.1| methionyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235] gi|198257748|gb|EDY82056.1| methionyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235] Length = 512 Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 178/478 (37%), Positives = 280/478 (58%), Gaps = 14/478 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+TAI Y N PH+GHAYE ++ DV+ARF RL G +V F TG DEHGQK+ ++A G Sbjct: 4 FYITTAIDYANGSPHLGHAYEKVLTDVVARFRRLMGDEVYFLTGIDEHGQKVQQSAAKRG 63 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + D+ + F+++ + L+IS DDFIRTTE RH D R + + + D+G+IYK Y G Sbjct: 64 IEPIELCDEAAGQFQELCESLEISNDDFIRTTETRHKDVVRSILQDLFDRGEIYKAEYKG 123 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 +YS R E + + ++ G + + V + E YFF+LS YQD L+ + ++H +F Sbjct: 124 FYSARAEQFLQEKDMVDGKWPEIFGE----VNEITESNYFFKLSKYQDWLVEHIKTHEDF 179 Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P R +V+ F+K + DL +SR + +WGI +P D +Y+ YVW DAL NY++ GY Sbjct: 180 IFPRFRAKQVLEFLKEPINDLCISRPKERLEWGIPLPFDEEYVTYVWFDALVNYISAIGY 239 Query: 245 LDNPDGSKAKFWPADLHVIGKDIL-RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 PD K+WP + HVIGKDIL HA+YWP L + + +P + HG+ GEK+ Sbjct: 240 -GTPDFE--KYWPVNYHVIGKDILVPPHAVYWPIMLKAIGIEIPSSLLVHGWWSINGEKM 296 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GN I+P E ++E VDALRYFL+RE++ G+D + + R N+DLAN +GNL++ Sbjct: 297 SKSTGNFIEPSEFVKEYSVDALRYFLIREMSVGQDSDFSDELFTNRYNSDLANDLGNLLN 356 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R ++M + P +E + + + +++ E + H+ L + + + Sbjct: 357 RVLTMTPRYCGETFPARTVSEGPEEELEAAWAETEKKVVELYEEFQFHKGLELTFNFIRQ 416 Query: 424 VDRYFDAQKPWELKKTNPDR----ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++RY + + PW L K+ + +T L + E +R+ LL+ +P +++++L Sbjct: 417 INRYAEQRSPWRLAKSEDPKDKEIVATSLSLMAEALRRAVGLLEPVMPATTTRVYELL 474 >gi|145332859|ref|NP_001078295.1| OVA1 (OVULE ABORTION 1); ATP binding / aminoacyl-tRNA ligase/ methionine-tRNA ligase/ nucleotide binding [Arabidopsis thaliana] Length = 533 Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 181/453 (39%), Positives = 261/453 (57%), Gaps = 9/453 (1%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E E ++T + Y NA PH+G AY I AD +ARF RL G V+F TGTDEHG+KIA +A Sbjct: 67 EGETFVLTTPLYYVNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKIATSA 126 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G D S+++R + LDI+YD FIRTT+ +H + + ++ GDIY+ Sbjct: 127 AANGRNPPEHCDLISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIYRA 186 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y + E Y ++ E+ + P +E+ YFF LS YQ L Sbjct: 187 DYEGLYCVNCEEYKDEKELL---ENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDILAQ 243 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY---L 239 +P F+ P R NEV S++KSGL+D S+SR DWGI +PDD + +YVW DAL Y L Sbjct: 244 NPRFVQPSYRLNEVQSWIKSGLRDFSISRALVDWGIPVPDDDKQTIYVWFDALLGYISAL 303 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T N + + + WPA LH+IGKDILRFHA+YWPA L+SA L LPK VF HGF+ Sbjct: 304 TEDNKQQNLETAVSFGWPASLHLIGKDILRFHAVYWPAMLMSAGLELPKMVFGHGFLTKD 363 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+ KSLGN ++P E++++ G DA+RYF +RE+ G DG Y +D K VNA LAN IG Sbjct: 364 GMKMGKSLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLANTIG 423 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL++R++ ++ K+ + + + +++++ R N +N + A V+ Sbjct: 424 NLLNRTLGLLKKNCESTLVVDSTVAAEGVPLKDTVEKLVEKARTNYENLSLSSACEAVLE 483 Query: 420 LVSEVDRYFDAQKPWELKK---TNPDRASTVLY 449 + + + Y D + PW L K + + A+ VL+ Sbjct: 484 IGNAGNTYMDQRAPWFLFKQGGVSAEEAAKVLF 516 >gi|167957600|ref|ZP_02544674.1| methionyl-tRNA synthetase [candidate division TM7 single-cell isolate TM7c] Length = 493 Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 190/477 (39%), Positives = 281/477 (58%), Gaps = 26/477 (5%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +KLYI+TAI Y N++PHIG+A + ++AD+ AR+HR G +V F GTDEHG KI+ AQ Sbjct: 3 KKLYITTAIPYANSKPHIGNALDYLLADIWARYHRQLGKEVRFQAGTDEHGNKISAKAQA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ +V+Q F+++ + + Y DFIRTT+ H + +WKK+S IYKG Y Sbjct: 63 EGLDPITYVNQTHLYFKEIMNKIGAQYTDFIRTTDSHHIQAVQYIWKKLSPY--IYKGTY 120 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWYS+ +E++ +D +V +G + H P + + EE Y+FRL+ + ++ + E++ Sbjct: 121 EGWYSVGEESFVSD-KVAAANNG--ISPDHGVPYERLSEENYYFRLTHFVPQIRNAIENN 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 I P R+ EV++ + G++DLS+SR K WG+ +P D ++YVWIDAL+NY+T Sbjct: 178 EIKIFPESRKKEVLNLLNDGIEDLSVSRPRKNLAWGVSVPGDDNQVIYVWIDALSNYITV 237 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY D D S +WPA++ V+GKDILRFHAI WPA L++ LPLPK++ HG I G+ Sbjct: 238 LGYPD--DESWRDYWPANVQVVGKDILRFHAIIWPAILMALGLPLPKQILVHGHIGFDGK 295 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+ P EVI+ G DA RY+ R I DG + + +K N +L N +GNL Sbjct: 296 KMSKSLGNVVSPNEVIDTYGADAFRYYFSRHIPTLDDGDFTWEKFEKAYNNELGNDLGNL 355 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 V R M+L+ G++ G + I Q R+ M A+ QV + Sbjct: 356 VQRVAKMVLRYQAGVV---GELNRGEHDI--------QLYRDAMDEMRFSDAIDQVWGKI 404 Query: 422 SEVDRYFDAQKPWELKKTNPDRAST-----VLYVTVEVIRQLAILLQAFVPKLANKI 473 ++Y + KPWE+ K D ST +L V I Q+A LL F+P+ ++KI Sbjct: 405 RATNQYLEQVKPWEVAKNKDDPESTEHLSDILQDAVGSIMQIADLLVPFLPEASSKI 461 >gi|307637700|gb|ADN80150.1| Methionyl-tRNA synthetase [Helicobacter pylori 908] Length = 651 Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 198/510 (38%), Positives = 303/510 (59%), Gaps = 6/510 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F++ D ++ YD FIRTT++ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDREHQKCVQNAFEIMFEKGDIYKGTY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG Y + E+Y + D +EEE YFF+LSAY+ LL +Y +P Sbjct: 122 SGHYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILPI R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+ D A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNGLDNKMAHFERAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNYSLKS-AKITAYYPKELEKAHQILDNANSFVPKMQLHKALEELFNIY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ V Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANTLLQSSFLLYAFMPKSAMKLASAFRVE 479 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 ++ + K M+ + +P+F + Sbjct: 480 ITPNNYERFFKAKKLQDMVLQDTEPLFCKM 509 >gi|325283464|ref|YP_004256005.1| Methionyl-tRNA synthetase [Deinococcus proteolyticus MRP] gi|324315273|gb|ADY26388.1| Methionyl-tRNA synthetase [Deinococcus proteolyticus MRP] Length = 685 Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 188/513 (36%), Positives = 290/513 (56%), Gaps = 12/513 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++L+I+TAI Y N PHIGH +E I+AD +AR+ RL G GTDEHG+KI KAA Sbjct: 8 KQLFITTAIDYANGVPHIGHVFEKILADAIARYQRLSGRPTHLLLGTDEHGEKILKAAAA 67 Query: 65 AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + VD + R FR + + L IS D F+RTT+ +H + + +++ D GDIY Sbjct: 68 QGITAQELVDDLSQRAFRGLWERLGISLDQFVRTTDAQHQQFVQDILQRVYDAGDIYFAE 127 Query: 124 YSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G YS+ E Y + E+ +G DG + P + E YFF++ YQ L Y E+ Sbjct: 128 YEGLYSVGSERYVTEKELVEGPDGIKRVPGDKEPPELRREANYFFKMEKYQPWLREYLEA 187 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 HP+ I P RNEV+ +K L DLS+SR + WG+ IP DP+++ YVW DAL YL+ Sbjct: 188 HPDLIQPAGFRNEVLEMLKEPLGDLSISRPKERIPWGVPIPWDPEHVTYVWFDALLAYLS 247 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK- 299 P+ + W HVIGKDIL+ HAI+WP L SA LP+ ++ H IL + Sbjct: 248 GPVGKGQPENVTGQTW----HVIGKDILKPHAIFWPTMLKSAGLPVYDRLVVHSHILAED 303 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+ KSLGN IDP +++++ +DA+RY L+RE + G D + + L R+N +LAN +G Sbjct: 304 GRKMGKSLGNAIDPEQLVQDFPLDAIRYALLREASMGSDTPFGETILVGRLNGELANDLG 363 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL++RS+SMI K G+IP G ++ I++ + + + + ++ AL + Sbjct: 364 NLLARSLSMIEKYRGGLIPAAGELGVREQKIVADAQSLPGRVMALVNDFKLNMALDAAMG 423 Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V +++RY +PW+L K + TVLY E +R ++ L+ +P A ++ L Sbjct: 424 FVRDLNRYIAESEPWKLAKDEAQAGQLDTVLYTVAEGLRVASVALEGAIPGKAQELRRQL 483 Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + D++ ++ L P ++ + +FP+ Sbjct: 484 GLGDQSYTLEAA-WGLTPAGTRIQSGEVLFPKL 515 >gi|325997892|gb|ADZ50100.1| Methionyl-tRNA synthetase [Helicobacter pylori 2017] Length = 538 Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 193/473 (40%), Positives = 290/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F++ D ++ YD FIRTT++ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDREHQKCVQNAFEIMFEKGDIYKGTY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG Y + E+Y + D +EEE YFF+LSAY+ LL +Y +P Sbjct: 122 SGHYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILPI R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+ D A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNGLDNKMAHFERAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNYSLKS-AKITAYYPKELEKAHQILDNANSFVPKMQLHKALEELFNIY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANTLLQSSFLLYAFMPKSAMKL 472 >gi|325996303|gb|ADZ51708.1| Methionyl-tRNA synthetase [Helicobacter pylori 2018] Length = 538 Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 193/473 (40%), Positives = 290/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F++ D ++ YD FIRTT++ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDREHQKCVQNAFEIMFEKGDIYKGTY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG Y + E+Y + D +EEE YFF+LSAY+ LL +Y +P Sbjct: 122 SGHYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILPI R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+ D A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNGLDNKMAHFERAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNYSLKS-AKITAYYPKELEKAHQILDNANSFVPKMQLHKALEELFNIY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANTLLQSSFLLYAFMPKSAMKL 472 >gi|225166021|ref|ZP_03727769.1| methionyl-tRNA synthetase [Opitutaceae bacterium TAV2] gi|224799733|gb|EEG18214.1| methionyl-tRNA synthetase [Opitutaceae bacterium TAV2] Length = 520 Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 189/490 (38%), Positives = 283/490 (57%), Gaps = 28/490 (5%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++ YI+TAI Y N PH+GHAYE ++ DV+ARF R G DV F TG DEHGQK+ + A Sbjct: 2 KKKTFYITTAIDYVNGSPHLGHAYEKVLTDVIARFRRAMGDDVYFLTGVDEHGQKVQQTA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 Q G+ + F D+ S+ FR + L+IS DDFIRTTE RH + R L +K+ DKG+IYK Sbjct: 62 QKRGIPPQQFCDEISQEFRAVCATLNISNDDFIRTTEPRHKNVVRDLLQKLYDKGEIYKA 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y+G+YS R E + D + + DG + V + E YFF+L AYQD L+ + + Sbjct: 122 EYTGFYSTRQEQFLQDKD--RNPDGTWPEI-FGEVTEITESNYFFKLRAYQDWLIDFLNT 178 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 + F+ P R+ +V+ F+ L DL +SR + +WGI +P D ++ YVW DAL NY + Sbjct: 179 NENFVFPRYRQKQVLEFLSEPLNDLCISRPKERLEWGIPLPFDENFVTYVWFDALVNYYS 238 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDIL-RFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 +D P WPAD HVIGKDIL HA+YWP L + + P+ + +HG+ Sbjct: 239 AV--IDKPG-----VWPADFHVIGKDILVPPHAVYWPIMLKALGIEPPRALLAHGWWSIN 291 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKS GN ++P+ + GVDALRYFL+RE++ G+D + R NA+LAN +G Sbjct: 292 GSKMSKSTGNFVEPVSFAAQYGVDALRYFLIREMSVGQDSDFSLQQFLARYNAELANNLG 351 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI--------H 411 NLV+R+++M + G +P S+ L R L+ + E ++++I H Sbjct: 352 NLVNRTLNMTNRFAGGCVPPLPPSPPSEGGDL---ERELRALWEKTRDEVIELSEGFQFH 408 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV----EVIRQLAILLQAFVP 467 AL + ++ +RY + + PW+L K+ +L V++ E +R A LL A +P Sbjct: 409 IALERTFGFITATNRYVEQRAPWKLGKSAEAADQALLRVSLATMAEALRLGATLLVAVMP 468 Query: 468 KLANKIFDIL 477 + K++ +L Sbjct: 469 ETVEKVYGVL 478 >gi|171914551|ref|ZP_02930021.1| methionyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136] Length = 527 Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 200/522 (38%), Positives = 314/522 (60%), Gaps = 29/522 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAI Y NA PHIGHAYE ++ADV+ARF RL+G +V F TG D+HGQK+ K+A AGV Sbjct: 6 YITTAIDYTNAPPHIGHAYEKVLADVMARFQRLNGREVYFLTGVDQHGQKVQKSADKAGV 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + FVD S+ F ++ L + YD + TT + H R + +K+ D G +YK Y+G+ Sbjct: 66 SPQQFVDDISQKFIELWAKLGVQYDGWAATTAEPHKKVVRAMLQKLHDAGQLYKQSYTGF 125 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 YS+R E + D E +G DG + V+ ++EE ++F+LS + D L +Y +SHP+FI Sbjct: 126 YSVRQEQFLTDKE--RGPDGTFGEEWGEVVE-LQEENWYFKLSEHVDWLRAYIKSHPDFI 182 Query: 188 LPIERRNEVISFVKSGL-KDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 P R N+V++ +++ + +DL +SR + WGI +P D +++ YVW DALTNY++ GY Sbjct: 183 FPAFRTNDVLNALENSVGQDLCISRPQERLSWGIPLPFDERFVNYVWFDALTNYISFAGY 242 Query: 245 LDNPDGSKA-----KFWPADLHVIGKDIL-RFHAIYWPAFLLSANLP---LPKKVFSHGF 295 L + G++ WPAD HVIGKDIL HAIYWP L + P +PK + HG+ Sbjct: 243 LSDEVGNEGLPEFQSIWPADAHVIGKDILVPAHAIYWPIMLHALGFPDDQMPKLIV-HGW 301 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 KG+K+SK+LGNV+DP EV +ALRY+L+R+++ G D ++ ++ N +LA Sbjct: 302 WNIKGQKMSKTLGNVVDPNEVSNVFTPEALRYYLMRDMSTGYDADLSEERMQIAYN-ELA 360 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G+GNL++R+++M K +G++ T G + E + ++ + E M N IH + Sbjct: 361 KGLGNLLNRALNMCQKYREGVLSTGGGYDDEVNLALRQTVAAAPAAYVEEMNNWAIHNGI 420 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLAN 471 A+ +V+ +++ D +P++L K +P++A+ +VLY E + ++ILL +P+ Sbjct: 421 AEAWKIVTHANQFVDMTQPFKLAK-DPEQAARLDSVLYHLAEALAHVSILLSPIMPEACK 479 Query: 472 KI-FDILFVADENRCFQSLDQR---LKPGFMLHKTFDPIFPR 509 K+ F + + E FQ D L G L + P+FPR Sbjct: 480 KLQFQLGWTPAEG--FQVKDLAWGLLSEGHQLGQPV-PLFPR 518 >gi|296807197|ref|XP_002844184.1| methionine-tRNA synthetase [Arthroderma otae CBS 113480] gi|238843667|gb|EEQ33329.1| methionine-tRNA synthetase [Arthroderma otae CBS 113480] Length = 588 Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 189/516 (36%), Positives = 282/516 (54%), Gaps = 28/516 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y NA PHIGH Y ++IAD+L R+ L G D TGTDEHG KI +AA G Sbjct: 52 YVTTPIFYVNAAPHIGHLYTILIADILKRWQVLLGNGDAKLLTGTDEHGMKIQQAALQNG 111 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + + D+N + F+ +A ++S+D FIRTT+ H + W+ ++ +G IY+G + G Sbjct: 112 LEPQALCDRNCKTFKTLAKEANVSHDHFIRTTDSAHKSAVQFFWENLNHRGYIYEGKHEG 171 Query: 127 WYSLRDEAYYNDDEVYKGAD---GQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSYY 180 WYS+ DE +Y V+ D G+ A V++ +E Y F+LSA+QD+LL +Y Sbjct: 172 WYSVSDETFYPASAVHSTLDPATGRKMMASIETGKEVKFTQETNYHFKLSAFQDRLLEHY 231 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238 +P FI P + ++ V SGL+DLS+SR WGI +P D +YVW+DAL NY Sbjct: 232 RKNPTFIQPQVYMDSIVQNVSSGLQDLSISRPVDRLSWGIPVPGDTTQTIYVWLDALVNY 291 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 +T GY P + WPAD+HV+GKDI RFH IYWPAFL++ +LPLP+ + +H Sbjct: 292 ITYAGYPFTPGREEESIWPADVHVVGKDITRFHCIYWPAFLMALDLPLPRTILTHAHWTM 351 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K+SKS GNV++P+ + GVD +R++L D YD + + L G+ Sbjct: 352 NHSKMSKSTGNVVNPMFAMARYGVDPMRFYLAINGGLASDTDYDNSYIVRDYKNILQGGL 411 Query: 359 GNLVSRSV--------SMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQL 409 GNL SR + ++ G P G A +S+ + S+V + + M Sbjct: 412 GNLCSRIMRGKGWNVRESVITATSG--PDRGKAKNKSEYEHMEFLSKVPSLVSKQMNELN 469 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKK---TNP---DRASTVLYVTVEVIRQLAILLQ 463 RAL +++ ++ + +RY PW L K TNP D+ V+Y E +R ILLQ Sbjct: 470 PRRALEEIVKIIDQTNRYVQNTGPWNLAKEAATNPAAHDQLVGVIYNAAESLRITGILLQ 529 Query: 464 AFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGF 497 F+P+ A ++ D+L V D+ R F + + P + Sbjct: 530 PFMPEKAKRLLDMLGVEDDLSKRSFAASSYGVDPDY 565 >gi|15806450|ref|NP_295156.1| methionyl-tRNA synthetase [Deinococcus radiodurans R1] gi|25009407|sp|Q9RUF3|SYM_DEIRA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|6459194|gb|AAF11005.1|AE001988_1 methionyl-tRNA synthetase [Deinococcus radiodurans R1] Length = 681 Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 193/494 (39%), Positives = 279/494 (56%), Gaps = 12/494 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++RE +I+ AI Y N PHIGH YE I+AD +AR+ RL G DV F GTDEHG+KI+KA Sbjct: 16 RDRE-FFITAAIDYANGTPHIGHVYEKILADAIARYQRLAGRDVTFVMGTDEHGEKISKA 74 Query: 62 AQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A GVT + VD + R F+ + L ISYD FIRTT +H + + +++ D GDIY Sbjct: 75 AAKGGVTPQELVDDLSERAFQGLWKKLGISYDFFIRTTSAKHKKYVQDVLQRVYDAGDIY 134 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 Y G YS+ E Y + E+ +G DG + + +P + E YFF + YQ LL Sbjct: 135 FAEYEGLYSVGAERYVTEKELVEGPDGVRRFPGDKDPPELRREANYFFNMQKYQPWLLET 194 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237 + +P+ I P RNEV+ +K + LS+SR WGI++P D ++ YVW DAL + Sbjct: 195 LQQNPDLIQPAGYRNEVLEMLKEDIGPLSISRPKARVPWGIELPWDTDHVTYVWFDALLS 254 Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 YLT K W HVIGKDIL+ HA++WP L +A LPL +++ H IL Sbjct: 255 YLTPLVSQGQDASMSGKAW----HVIGKDILKPHAVFWPTMLRAAGLPLYRRLVVHSHIL 310 Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 + G K+ KSLGN IDP E++ VDA+RY L+RE + G D + + L R+N+DLAN Sbjct: 311 AEDGRKMGKSLGNAIDPEELVAAWPVDAIRYALLREASLGADSPFGEGVLVSRLNSDLAN 370 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNL+SR+VSMI K G+IP T+ + I + + E+ + I+ A+ Sbjct: 371 DLGNLLSRTVSMIQKYRGGVIPAATEPTDREREIEAAARALPDEVLRLVDELKINMAIDA 430 Query: 417 VISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +S V +++RY PW L K+ R TVLY E +R ++ L+A +P A ++ Sbjct: 431 AMSFVRDLNRYIAESTPWTLAKSPETQGRLDTVLYTAAEGLRVASVALEAVIPTKAKELR 490 Query: 475 DILFVADENRCFQS 488 + L + + Q+ Sbjct: 491 EQLGLGRQGYPLQA 504 >gi|171692863|ref|XP_001911356.1| hypothetical protein [Podospora anserina S mat+] gi|170946380|emb|CAP73181.1| unnamed protein product [Podospora anserina S mat+] Length = 637 Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 194/502 (38%), Positives = 293/502 (58%), Gaps = 26/502 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHR-LDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y NA PHIGH Y M +ADVL R+ L + TGTDEHG KI +AA N Sbjct: 70 YVTTPIFYVNAAPHIGHMYSMTLADVLKRYQSVLHSRPAILLTGTDEHGMKIQQAASNKD 129 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + K F D+ + F+++A ISY+ FIRTT+ H W + +KG IY+ + G Sbjct: 130 MHPKQFCDETAEQFKELASTAQISYNRFIRTTDTDHIQAVEHFWFLLQEKGLIYESKHEG 189 Query: 127 WYSLRDEAYYNDDEVYKGAD---GQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSYY 180 WYS+ DEA+Y + ++ K D G+ + A + V+W+EE Y FR++A +++LL +Y Sbjct: 190 WYSVSDEAFYPESQIEKKMDAFTGEVFMASVESGSKVEWVEERNYHFRMTALRERLLGFY 249 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238 +PE+++P +R +V+ +V++ L DLS+SR WG+++P D +YVW+DAL NY Sbjct: 250 GENPEWVVPAKRMGDVVDWVRNHLTDLSISRPASRLSWGVRVPGDASQTIYVWVDALINY 309 Query: 239 LTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 +T G+ + P + WPAD+HVIGKDI+RFH +YWPA LL+ +LP+PKKV +H Sbjct: 310 ITAAGFPNWQPGRREVGGWPADVHVIGKDIVRFHCVYWPALLLALDLPMPKKVLTHAHWT 369 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 K+SKSLGNV++P+ V+ G D LR++L+ E G D Y+ D L + L G Sbjct: 370 MNRTKMSKSLGNVVNPMYVMNVHGADVLRFYLMFEGGIGNDADYNNDNLLVKHKKYLQGG 429 Query: 358 IGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNLVSR L D +I +P E E L+ ++ + EN+ RA+ + Sbjct: 430 VGNLVSRITRSKLWDLKEIISRSPRGRIEFPEDNLATLPAIVDKHMENLDPVSALRAIME 489 Query: 417 VIS----LVSEVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPK 468 V + L+SE++ PW LKK+ + D A ++ + E +R ILLQ F+P Sbjct: 490 VATQANALLSEIE-------PWRLKKSTNQEDHDLADEMVCLAAESLRVCGILLQPFLPT 542 Query: 469 LANKIFDILFVADENRCFQSLD 490 A+++ D+L V ENR F++ + Sbjct: 543 KADQLLDMLGVLPENRTFKNTE 564 >gi|156082730|ref|XP_001608849.1| methionyl-tRNA synthetase [Babesia bovis T2Bo] gi|154796099|gb|EDO05281.1| methionyl-tRNA synthetase, putative [Babesia bovis] Length = 534 Score = 343 bits (879), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 185/474 (39%), Positives = 278/474 (58%), Gaps = 8/474 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+TA++Y N PHIGH YE++ +D+++RF ++ G+ + +GTDEHG K+A A++ Sbjct: 27 KKYYITTALSYTNGPPHIGHTYEIVTSDIISRFFKVFGMVPILLSGTDEHGLKVATTAES 86 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ D S F D L + F+RTTE RH+ + + +W+ + D+GDIY G Y Sbjct: 87 YGMFPIELADYYSAKFHDNNTDLLTATHIFVRTTEPRHYKSAQKIWRILRDRGDIYLGEY 146 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SGWY++R+E + EV A P M+E YFFR+S YQD L+ S P Sbjct: 147 SGWYNVREETFLT--EVEAAATDYKDPLSGKPYTLMKESSYFFRMSKYQDMLIEKLSSDP 204 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 ++ P R E++S +K L+DLS+SR F WGI +PDDP ++MYVW DALT YL+ G+ Sbjct: 205 AYLQPDSARAEILSRLKKPLEDLSVSRCNFKWGIPVPDDPSHVMYVWSDALTGYLSGIGF 264 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKI 303 D D S+ K WP DL VIGKDI+ F A+ W + L+S +PLPK +F+HGFI G K+ Sbjct: 265 GDFDDISQLKLWPPDLQVIGKDIIWFFAVIWTSILMSLEVPLPKTIFAHGFITAADGRKM 324 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNV++ E++++ GVD LRY+++R+ G D +D L N+DL + IGNL+ Sbjct: 325 SKSLGNVVNTKELLDKYGVDTLRYYMIRDSVFGSDVKFDLSSLADLHNSDLTDTIGNLLH 384 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R ++ +K +G IP P A + V V + ++Q + AL VI + Sbjct: 385 RITTLCVKFSNGCIP-PLASKSAPRPFCMV--DVARRTLSHLQRFALQDALVTVIEAYRD 441 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++Y ++PW K + R T+ V +E I L L++ +P ++ +F L Sbjct: 442 TNKYLTDREPWA-KGSVDTRLDTIRNV-LEAIYFLNHLMEPVIPLASSVVFKKL 493 >gi|15612032|ref|NP_223684.1| methionyl-tRNA synthetase [Helicobacter pylori J99] gi|7388283|sp|Q9ZKG9|SYM_HELPJ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|4155547|gb|AAD06543.1| METHIONYL-TRNA SYNTHETASE [Helicobacter pylori J99] Length = 656 Score = 343 bits (879), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 193/473 (40%), Positives = 290/473 (61%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F++ D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y +V +EEE YFF+LSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAVSKVDNTDSKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILPI R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+ D A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNGLDNKMAHFERAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ ++ Sbjct: 361 LNRLLGMAKKYFNYSLKS-TKITAYYPKELEKAHQILDNANSFVPKMQLHKALEELFNIY 419 Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANTLLQSSFLLYAFMPKSAMKL 472 >gi|28572916|ref|NP_789696.1| methionyl-tRNA synthetase [Tropheryma whipplei TW08/27] gi|28411049|emb|CAD67434.1| methionyl-tRNA synthetase [Tropheryma whipplei TW08/27] Length = 583 Score = 342 bits (878), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 195/550 (35%), Positives = 297/550 (54%), Gaps = 77/550 (14%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T + Y N PHIGHAY ++++DV AR+ R G D F +GTDEHG K+ +AA+ Sbjct: 3 FYITTPVFYVNDIPHIGHAYTLVVSDVFARWQRQSGKDTFFLSGTDEHGLKVLRAAEEKN 62 Query: 67 VTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 +T + + D + ++ + D++ IS DDF+RTTE RH + + ++ + IY G YS Sbjct: 63 MTPQGWADLMVKTAWKPLLDLMHISNDDFVRTTESRHRERVKWFINRLRENQYIYSGQYS 122 Query: 126 GWYSLRDE--------AYYNDDEVY-------------KGADGQYYNAQHN-PVQWMEEE 163 G+Y + E A ND+ V +G + Y+ H ++ E+ Sbjct: 123 GYYCVSCEEFKTVSQSALPNDESVNGTLGKDPRTCSLPQGEEQNYFCEVHGCQLEHFTEK 182 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 YFFRLSA+ D+LL Y+ +P+FI P NEV+ FVK+G+ DLS+SR +F WGI++P D Sbjct: 183 NYFFRLSAFTDRLLDLYKKNPDFIEPKSAYNEVVQFVKNGVSDLSISRSSFTWGIEVPWD 242 Query: 224 PQYIMYVWIDALTNYL--------------TTTG---------------YLDNPDGSK-- 252 +++YVW DAL NYL TT G + P GS Sbjct: 243 EGHVVYVWFDALINYLTPVMSAKEELPIDGTTPGGAEFCTHSNLNTLESSIPGPGGSAES 302 Query: 253 --------------------AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 K+WPA H+IGKDILRFHA+ WPA L++A LP+P+K+F+ Sbjct: 303 DRLSHTLSTSADNAALTSPFKKYWPAS-HIIGKDILRFHAVIWPAMLMAAGLPVPEKIFA 361 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG++L G+K+SKS I P ++ + GVDA+RY+ +R+ G+D + + + N+ Sbjct: 362 HGWLLVDGQKMSKSKLTGIKPQDLTDIFGVDAVRYYFLRQPVFGQDYSFSIESIAACYNS 421 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 +LA+G GNL R SM +G + P ++E DES+L C V + + + H Sbjct: 422 ELADGYGNLACRLSSMYTTYLNGRVIVPKIYSEEDESLLQACKDVSDRACKAIDELIPHI 481 Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 A+A++ SL + Y Q+PW L KK + +R + VLY + + + ILL +P++ N Sbjct: 482 AMAEIWSLAVRANTYTTRQQPWSLHKKQDDERLACVLYTALRALSTITILLSPIMPRITN 541 Query: 472 KIFDILFVAD 481 K++ F AD Sbjct: 542 KLWSA-FGAD 550 >gi|317146103|ref|XP_001821294.2| methionyl-tRNA synthetase [Aspergillus oryzae RIB40] Length = 574 Score = 342 bits (877), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 187/495 (37%), Positives = 275/495 (55%), Gaps = 26/495 (5%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAK 60 + ++ Y++T I Y NA PH+GH Y MIIAD+L R+ L G D TGTDEHG KI + Sbjct: 51 EHKKPYYVTTPIFYVNAAPHVGHLYTMIIADILKRWRTLCGETDAQLLTGTDEHGMKIQQ 110 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA A + T+ F D N + F D+A ++ Y+ FIRTTE H + + W+ + +G IY Sbjct: 111 AALAAEMDTQAFCDMNYKTFEDLAKAANMDYNYFIRTTEAAHKKSVQYFWEMLDHRGYIY 170 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGAD-----GQYYNAQHNP-VQWMEEEGYFFRLSAYQD 174 + GWYS+ DE +Y +V+ D + +A+ V+W E Y FRLSA+Q+ Sbjct: 171 TSKHEGWYSVSDETFYPPSQVHNSLDPTTGRKRMVSAETGKEVEWSSETNYHFRLSAFQE 230 Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWI 232 +LL Y++ FI P E++ V SGL+DLS+SR + WGI +P D +YVW+ Sbjct: 231 RLLDLYKTG--FITPSNYTTEIVKSVSSGLQDLSISRPVERLTWGIPVPGDDTQTIYVWL 288 Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 DAL NYLT GY P WPAD+HV+GKDI+RFH +YWPAFL++ +LPLP+ V Sbjct: 289 DALVNYLTKAGYPFPPGQEGGLGWPADVHVVGKDIVRFHCVYWPAFLMALDLPLPRNVLV 348 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG EK+SKS GNV++P ++ GVD +R+FL + D YD + + Sbjct: 349 HGHWTINHEKMSKSTGNVVNPFFSLDRFGVDTMRFFLAYQGGLAGDADYDNSYIIRDYKK 408 Query: 353 DLANGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404 L +GIGNLV R++ S I+ G +P A E D + ++ E Sbjct: 409 LLQSGIGNLVLRTIGSSKGKLHSYIVSGTSGELP---AANEQDLQFEQLLRETPVKVGEQ 465 Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 M++ AL ++ L+ + ++Y +PW+ + +A VL+ E +R ILLQ Sbjct: 466 MESLNPRAALQNIMVLIEQGNKYIHLSEPWK----DAIKAQRVLFNVAESLRIAGILLQP 521 Query: 465 FVPKLANKIFDILFV 479 F+P + ++ D+L V Sbjct: 522 FMPTKSKELLDVLRV 536 >gi|238491664|ref|XP_002377069.1| methionyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357] gi|220697482|gb|EED53823.1| methionyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357] Length = 574 Score = 342 bits (877), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 187/495 (37%), Positives = 275/495 (55%), Gaps = 26/495 (5%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAK 60 + ++ Y++T I Y NA PH+GH Y MIIAD+L R+ L G D TGTDEHG KI + Sbjct: 51 EHKKPYYVTTPIFYVNAAPHVGHLYTMIIADILKRWRTLCGETDAQLLTGTDEHGMKIQQ 110 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA A + T+ F D N + F D+A ++ Y+ FIRTTE H + + W+ + +G IY Sbjct: 111 AALAAEMDTQAFCDMNYKTFEDLAKAANMDYNYFIRTTEAAHKKSVQYFWEMLDHRGYIY 170 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGAD-----GQYYNAQHNP-VQWMEEEGYFFRLSAYQD 174 + GWYS+ DE +Y +V+ D + +A+ V+W E Y FRLSA+Q+ Sbjct: 171 TSKHEGWYSVSDETFYPPSQVHNSLDPTTGRKRMVSAETGKEVEWSSETNYHFRLSAFQE 230 Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWI 232 +LL Y++ FI P E++ V SGL+DLS+SR + WGI +P D +YVW+ Sbjct: 231 RLLDLYKTG--FITPSNYTTEIVKSVSSGLQDLSISRPVERLTWGIPVPGDDTQTIYVWL 288 Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 DAL NYLT GY P WPAD+HV+GKDI+RFH +YWPAFL++ +LPLP+ V Sbjct: 289 DALVNYLTKAGYPFPPGQEGGLGWPADVHVVGKDIVRFHCVYWPAFLMALDLPLPRNVLV 348 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG EK+SKS GNV++P ++ GVD +R+FL + D YD + + Sbjct: 349 HGHWTINHEKMSKSTGNVVNPFFSLDRFGVDTMRFFLAYQGGLAGDADYDNSYIIRDYKK 408 Query: 353 DLANGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404 L +GIGNLV R++ S I+ G +P A E D + ++ E Sbjct: 409 LLQSGIGNLVLRTIGSSKGKLHSYIVSGTSGELP---AANEQDLQFEQLLRETPVKVGEQ 465 Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 M++ AL ++ L+ + ++Y +PW+ + +A VL+ E +R ILLQ Sbjct: 466 MESLNPRAALQNIMVLIEQGNKYIHLSEPWK----DAIKAQRVLFNVAESLRIAGILLQP 521 Query: 465 FVPKLANKIFDILFV 479 F+P + ++ D+L V Sbjct: 522 FMPTKSKELLDVLRV 536 >gi|28493730|ref|NP_787891.1| methionyl-tRNA synthetase [Tropheryma whipplei str. Twist] gi|28476772|gb|AAO44860.1| methionyl-tRNA synthetase [Tropheryma whipplei str. Twist] Length = 583 Score = 342 bits (877), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 195/550 (35%), Positives = 297/550 (54%), Gaps = 77/550 (14%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T + Y N PHIGHAY ++++DV AR+ R G D F +GTDEHG K+ +AA+ Sbjct: 3 FYITTPVFYVNDIPHIGHAYTLVVSDVFARWQRQSGKDTFFLSGTDEHGLKVLRAAEEKN 62 Query: 67 VTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 +T + + D + ++ + D++ IS DDF+RTTE RH + + ++ + IY G YS Sbjct: 63 MTPQGWADLMLKTAWKPLLDLMHISNDDFVRTTESRHRERVKWFINRLRENQYIYSGQYS 122 Query: 126 GWYSLRDE--------AYYNDDEVY-------------KGADGQYYNAQHN-PVQWMEEE 163 G+Y + E A ND+ V +G + Y+ H ++ E+ Sbjct: 123 GYYCVSCEEFKTVSQSALPNDESVNGTLGKDPRTCSLPQGEEQNYFCEVHGCQLEHFTEK 182 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 YFFRLSA+ D+LL Y+ +P+FI P NEV+ FVK+G+ DLS+SR +F WGI++P D Sbjct: 183 NYFFRLSAFTDRLLDLYKKNPDFIEPKSAYNEVVQFVKNGVSDLSISRSSFTWGIEVPWD 242 Query: 224 PQYIMYVWIDALTNYL--------------TTTG---------------YLDNPDGSK-- 252 +++YVW DAL NYL TT G + P GS Sbjct: 243 EGHVVYVWFDALINYLTPVMSAKEELPIDGTTPGGAEFCTHSNLNTLESSIPGPGGSAES 302 Query: 253 --------------------AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 K+WPA H+IGKDILRFHA+ WPA L++A LP+P+K+F+ Sbjct: 303 DRLSHTLSTSADNAALTSPFKKYWPAS-HIIGKDILRFHAVIWPAMLMAAGLPVPEKIFA 361 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 HG++L G+K+SKS I P ++ + GVDA+RY+ +R+ G+D + + + N+ Sbjct: 362 HGWLLVDGQKMSKSKLTGIKPQDLTDIFGVDAVRYYFLRQPVFGQDYSFSIESIAACYNS 421 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 +LA+G GNL R SM +G + P ++E DES+L C V + + + H Sbjct: 422 ELADGYGNLACRLSSMYTTYLNGRVIVPKIYSEEDESLLQACKDVSDRACKAIDELIPHI 481 Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 A+A++ SL + Y Q+PW L KK + +R + VLY + + + ILL +P++ N Sbjct: 482 AMAEIWSLAVRANTYTTRQQPWSLHKKQDDERLACVLYTALRALSTITILLSPIMPRITN 541 Query: 472 KIFDILFVAD 481 K++ F AD Sbjct: 542 KLWSA-FGAD 550 >gi|308163205|gb|EFO65564.1| Methionyl-tRNA synthetase [Giardia lamblia P15] Length = 572 Score = 342 bits (877), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 189/562 (33%), Positives = 292/562 (51%), Gaps = 54/562 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M+ +E +Y++T I Y N +PHIGH + ++AD L RF +L G + TGTDEHGQK+ + Sbjct: 1 MRTKE-VYLTTPIYYVNGKPHIGHVFTTLLADTLKRFRKLQGFETYLMTGTDEHGQKVQQ 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRD-MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 +A+ G+ + + D ++ F + + D F+RTT +H + LW+K+ G I Sbjct: 60 SAEKLGLQPQQWCDNMAKTFETYFLENFGLCPDFFMRTTMSKHVEMATKLWEKLRAVGLI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQ-----YYNAQHNPVQWMEEEGYFFRLSAYQD 174 YK Y GWY + DEA+ + + G D Q P ++ EE Y F+LS++Q+ Sbjct: 120 YKDKYEGWYCIADEAFVTETNLKDGVDAQGKPCKVSTESGQPCVFLSEENYKFKLSSFQE 179 Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWI 232 LL +Y +PE I+P R+ E++SF++SGL D+S+SR WGI +P D ++MYVWI Sbjct: 180 PLLKFYRDNPEIIIPAFRQAEIVSFIQSGLHDISISRSKDKISWGIPVPGDSDHVMYVWI 239 Query: 233 DALTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291 DALT YLT NPDG+ ++ WPAD+ +GKDI RFH +YW AFL+ A +P P++ F Sbjct: 240 DALTIYLTAADSTINPDGTFSSRLWPADVQFLGKDIARFHCVYWLAFLMGAGIPCPRRFF 299 Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 HG+ +KI KSLGN +DP ++E G+D ++YF++RE + D ++ + R Sbjct: 300 IHGWWTINQQKIGKSLGNALDPTSLVETYGLDGIKYFMLREGSPANDPSITEELISMRTE 359 Query: 352 ADLANGIGNLVSRSV--------------------------SMILKDYDGMIP--TPGAF 383 +DLAN +GNL R S+ +K+ I P Sbjct: 360 SDLANVLGNLTMRCTADSLLPDRIWTDPSKLFEGVSFTQIRSLWMKNRKSSIAELMPADV 419 Query: 384 TESDE-----------SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 E + +L + +E+ M N I L+++ ++ ++ Y Sbjct: 420 GERENISSIIRIDDISDLLDKGLVIYEEVTGLMNNVDIPGTLSKIFEILVGINNYIQLTM 479 Query: 433 PWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS-- 488 PW L K+ + V+Y E++R A LL F+P+ A I D L V E+R Q Sbjct: 480 PWVLIKKEETKNGHEFVMYCATELLRICATLLLPFIPQKAPLILDQLGVPSEDRAIQKDV 539 Query: 489 -LDQRLKPGFMLHKTFDPIFPR 509 + PG L + P+FP+ Sbjct: 540 LTIGYVTPGLALGEKLPPLFPK 561 >gi|125834886|ref|XP_694935.2| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like [Danio rerio] Length = 595 Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 197/505 (39%), Positives = 288/505 (57%), Gaps = 27/505 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y NA PHIGH Y + AD L R+ L + TGTDEHG KI +AA +AG Sbjct: 48 YITTPIFYVNAAPHIGHVYSAVTADCLHRYKLLQRYNSRLATGTDEHGLKIQQAAGSAGK 107 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 F + S +F+ + ISY D+IRTTEKRH W + KG IYKG Y GW Sbjct: 108 DPLNFCTEVSESFKHVFQRCGISYTDYIRTTEKRHRQAVEHFWTVLLSKGYIYKGTYEGW 167 Query: 128 YSLRDEAYYNDDEVYKGADGQ-----YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 YS DE++ + +V D + + V+WM E+ Y FRLS ++ +LL + S Sbjct: 168 YSTPDESFLTETQVTDSTDSEGRRIKVSTESGHKVEWMNEDNYMFRLSDFRTQLLHWLRS 227 Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239 +P I P++ ++ V+ +++ + DLS+SR+ WGI +P DP+ +YVW+DAL NYL Sbjct: 228 NPNTIQPVKFQHLVLQWLEDDDIPDLSVSRQKSRLQWGIPVPGDPEQTIYVWLDALVNYL 287 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T GY N +K+W HV+GKDIL+FHAIYWPAFLL+A L LP+K++ H K Sbjct: 288 TVVGYPQN----HSKWWSVVHHVVGKDILKFHAIYWPAFLLAAGLALPQKIYVHSHWTVK 343 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G+K+SKS+GNVI+P+E IE+ VD LRYFL+R+ D Y D + K N++LA+ +G Sbjct: 344 GKKMSKSIGNVINPLESIEKFTVDGLRYFLLRQGVPDSDCDYYDDKVMKMCNSELADALG 403 Query: 360 NLVSRSVSMILKD-----------YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408 L++R + L + + P+ A +E D ++ S + I ++ +N Sbjct: 404 GLLNRCAAPSLNPTQVYPRFSTSCFPAVGPSGKAVSE-DYRMIEAVSALPGIIEQHFENL 462 Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAF 465 +++AL + + V + + PW L + NP+ T+L+V++E +R ILLQ Sbjct: 463 YVYKALEAIGACVRLTNGFVQRHAPWRLDRNNPEEQQWLDTILHVSLECLRIYGILLQPV 522 Query: 466 VPKLANKIFDILFVADENRCFQSLD 490 VP LA+KI L V E R + SL+ Sbjct: 523 VPDLADKILSRLGVTPEERSWNSLN 547 >gi|113953658|ref|YP_730540.1| methionyl-tRNA synthetase [Synechococcus sp. CC9311] gi|113881009|gb|ABI45967.1| methionyl-tRNA synthetase [Synechococcus sp. CC9311] Length = 514 Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 179/474 (37%), Positives = 264/474 (55%), Gaps = 9/474 (1%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y N +PH+G Y I D LARF RL+G +V+F TG DEHGQKI + A + G++ Sbjct: 5 LTTPLYYVNDKPHLGSTYTTIACDALARFQRLEGHEVVFVTGVDEHGQKIQRTAADQGIS 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + ++ + DIS D F+RTT RH + +++ + GDI G +GWY Sbjct: 65 PIDHCNRITASYEKAWNEWDISNDRFVRTTSPRHLPLVQQFFQRCEEAGDIRSGRQTGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + +D A + P++W +EE FF LS YQ+++ + + +FI Sbjct: 125 CVGCEEFKDDP---AEAVNPTCSIHQKPLEWRDEENLFFCLSHYQEQIEAIIK-QSDFIA 180 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT---GYL 245 P RRNE+ +FV GL+D S+SR DWG+ +P + YVW DAL YLT G Sbjct: 181 PASRRNEIQNFVAGGLRDFSISRVNVDWGLPVPGHQGHTFYVWFDALLGYLTALLDDGGT 240 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + D WPA+ HVIGKDILRFHA+YWPA L+SA LPLPKKVF HGF+ +G+K+ K Sbjct: 241 IDLDRLNTIGWPANQHVIGKDILRFHAVYWPAMLMSAGLPLPKKVFGHGFLTREGQKMGK 300 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S+GNV+DP ++ G DA+R++L+R+I G DG + + VN DLAN IGNL++R+ Sbjct: 301 SIGNVLDPELLLNRCGTDAVRWYLLRDIQFGDDGDFQQQRFVDLVNNDLANTIGNLLNRT 360 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 SM K ++ PT + ++ + RE M + +A ++ L + + Sbjct: 361 SSMSRKWFNESTPTVASKDSDQHALRQAAETAIASAREAMPSMAFQKAAESILQLAIQAN 420 Query: 426 RYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y + Q PW K A LY +E R + LL+ VP L+ +I L Sbjct: 421 GYLNDQAPWSKMKKGGQEAQVAVDLYGVLESARLVGWLLKPLVPDLSERILSQL 474 >gi|115398011|ref|XP_001214597.1| hypothetical protein ATEG_05419 [Aspergillus terreus NIH2624] gi|114192788|gb|EAU34488.1| hypothetical protein ATEG_05419 [Aspergillus terreus NIH2624] Length = 578 Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 191/506 (37%), Positives = 277/506 (54%), Gaps = 30/506 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAA 62 ++ Y++T I Y NA PH+GH Y MIIADVL R+ L G D TGTDEHG KI +AA Sbjct: 52 KKPYYVTTPIFYVNAAPHVGHLYTMIIADVLKRWRALAGDTDAQLLTGTDEHGMKIQQAA 111 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ T+ F D N + F +A ++ Y+ FIRTT+ H + + W+ + +G IY Sbjct: 112 AAAGMDTQAFCDMNFKTFEALAKAANMDYNHFIRTTDAAHKEAVQYFWEMLDHRGYIYTS 171 Query: 123 CYSGWYSLRDEAYYNDDEVYKGAD-----GQYYNAQHN-PVQWMEEEGYFFRLSAYQDKL 176 + GWYS+ DE +Y +V D + +A+ V+W E Y FRLSA+Q++L Sbjct: 172 KHEGWYSVSDETFYPQSQVQNSLDPTTGRKRMVSAETGKAVEWSSETNYHFRLSAFQERL 231 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDA 234 L Y++ FI P + +VI V SGL+DLS+SR + +WGI +P D +YVW+DA Sbjct: 232 LELYKT--GFIQPSKYDRDVIRSVSSGLQDLSISRPVERLNWGIPVPGDETQTIYVWLDA 289 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--------RFHAIYWPAFLLSANLPL 286 L NYLT GY P WPAD+HV+GKDI+ RFH +YWPAFL++ +LPL Sbjct: 290 LVNYLTKAGYPFPPGQEGRLGWPADVHVVGKDIIRAMLTGTPRFHCVYWPAFLMALDLPL 349 Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 P+ V HG EK+SKS GN ++P ++ GVD +R+FL + D YD + Sbjct: 350 PRNVLVHGHWTINHEKMSKSTGNTVNPFFALDRFGVDTMRFFLAYQGGLAGDADYDNSFI 409 Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMI--PTPGAFTESDESILSVCSRVLQE---- 400 + L +GIGNL R++ K+ I T G ++E + V +QE Sbjct: 410 IRDYKKLLQSGIGNLTHRAIGCAKKELRTYIVNGTSGGLPPANEDDM-VFEETVQETPAK 468 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460 + ++M+ AL +V++LV + +YF A PW+ NP L+ +E +R I Sbjct: 469 VAKHMEELNPRAALQEVVTLVEKAQKYFHASAPWQ----NPTEHQRALFNIIESLRIAGI 524 Query: 461 LLQAFVPKLANKIFDILFVADENRCF 486 LLQ F+P + ++ D+L V R Sbjct: 525 LLQPFMPTKSKELLDLLRVDLSKRTL 550 >gi|303314943|ref|XP_003067480.1| methionyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240107148|gb|EER25335.1| methionyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] Length = 568 Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 186/505 (36%), Positives = 271/505 (53%), Gaps = 34/505 (6%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61 +R+ Y++T I Y NA PH+GH Y +++AD+L R+ L G D TGTDEHG KI +A Sbjct: 47 QRKPYYVTTPIFYVNASPHVGHLYTLVLADILKRWQVLLGNNDAQLLTGTDEHGIKIQQA 106 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A + G+ DQN + F+D+A ++ +D FIRTT+ H D + W+ + +G IY Sbjct: 107 AASHGLEPIKLCDQNCQTFKDLAQKANVQHDHFIRTTDPEHRDAVQYFWEMLDHRGYIYT 166 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDK 175 + GWYS+ DE +Y + V+ D V+W E Y FRLSA++D+ Sbjct: 167 AKHEGWYSVSDETFYPSNAVHATLDPATGRKIMSTIETGKEVEWFSETNYHFRLSAFKDR 226 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWID 233 LL +Y +P FI P + ++ V SGL DLS+SR + WGI++P D +YVW+D Sbjct: 227 LLDFYRENPTFIRPKRYMDNIVQSVSSGLTDLSISRPVQRLTWGIRVPGDDTQTIYVWLD 286 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NYLT GY P WPA++HV+GKDILRFH +YWPAFL++ +LPLP++V SH Sbjct: 287 ALINYLTYAGYPFTPGKENQSIWPANVHVVGKDILRFHCVYWPAFLMALDLPLPRQVLSH 346 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 EK+SKS GNV++P+ + GVD LR++L + D Y+ + +R Sbjct: 347 AHWTIGREKMSKSTGNVVNPMYALARFGVDPLRFYLAHDGGLSDDADYENAFVTERYKKT 406 Query: 354 LANGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405 L G+GNL SR V I +G P P +E+D + + R M Sbjct: 407 LQWGVGNLTSRLVRSKKWNVRRSIEWGVEGRFPPP---SEADRKHQQLLEGIRDVTRSWM 463 Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465 + +A V+ ++ E T P S V+Y T E +R ILLQ F Sbjct: 464 DDLNPRKAAESVVGIIHESG------------NTEPTELSRVIYNTAESLRIAGILLQPF 511 Query: 466 VPKLANKIFDILFVAD--ENRCFQS 488 +P+ + ++ D+L VA E R F++ Sbjct: 512 MPEKSARLLDMLGVAGDPEKRSFEA 536 >gi|315453125|ref|YP_004073395.1| methionyl-tRNA synthetase [Helicobacter felis ATCC 49179] gi|315132177|emb|CBY82805.1| methionyl-tRNA synthetase [Helicobacter felis ATCC 49179] Length = 615 Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 185/504 (36%), Positives = 291/504 (57%), Gaps = 18/504 (3%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T I Y N PH+GHAY IAD+L +++ L DV TGTDEHGQKIA++A V+ Sbjct: 5 VTTPIYYVNDVPHLGHAYTTFIADMLKKYYALRADDVFLLTGTDEHGQKIAQSALKHQVS 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + + S FRD D I YD FIRTT+ H + ++ + +GDIYKG Y G Y Sbjct: 65 PLEYASKISSKFRDQWDFFGIDYDHFIRTTDDSHMFAVQYAFEAMLARGDIYKGTYKGAY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E++ + + D Q +EEE YFF LS YQD+LL +Y +P+ IL Sbjct: 125 CVSCESFVTGEA--RCPDCQ------RETSILEEESYFFALSKYQDRLLDFYAKNPKTIL 176 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGYL 245 P R +EV+ F++ GL DLS++R +F+WGIK+P +DP++++YVW+DAL NY++ GY Sbjct: 177 PTYRTHEVLRFIEQGLHDLSITRTSFEWGIKLPKNLNDPKHVVYVWLDALLNYVSALGY- 235 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 P+G K ++ +HV+GKDILRFHAIYWPAFL+S LPL K + HG+ +G K+SK Sbjct: 236 --PNGGKMGYFDHAIHVVGKDILRFHAIYWPAFLMSLELPLFKHLCVHGWWTIEGVKMSK 293 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S+GNV+ + + G D LRYFL+RE+ G+DG + ++ L +R NADL+N +GNLV R Sbjct: 294 SIGNVLCAQSIAQTYGRDVLRYFLLREVPLGQDGDFSQEALLRRANADLSNTLGNLVQRL 353 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 M + ++G + + E ++ + + + +M+ H+ L + + + Sbjct: 354 SGMAGRYFEGRVQSTHTLEHYKEDYETLHA-LFAPLDGHMEAMQPHKYLEDLWKVFEGAN 412 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 +PW+++ + + +L + ++ + L +P+ A K+ +L V + Sbjct: 413 ALIARTEPWKMQ--DQTKIMALLGLIATLLVKSVYYLYPIIPESAQKLATLLGVELSPKG 470 Query: 486 FQSLDQRLKPGFMLHKTFDPIFPR 509 F ++ ++ +L KT P+FPR Sbjct: 471 FSAICEQKPLSLVLEKT-PPLFPR 493 >gi|317011232|gb|ADU84979.1| methionyl-tRNA synthetase [Helicobacter pylori SouthAfrica7] Length = 642 Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 192/473 (40%), Positives = 287/473 (60%), Gaps = 6/473 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F+ D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKSQWDFFNLDYDGFIRTTDNEHQKCVQNAFEIMFEKGDIYKGTY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + +EEE YFFRLSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKTDNTEGKILCPDCLRETTLLEEESYFFRLSAYEKPLLEFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILPI R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+ + A F A H++GKDILRFHAIYWPAFL+S NLPL K++ HG+ +G Sbjct: 242 LGYLNGLENRMAHFECAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R + M K ++ + + T L ++L + +H+AL ++ + Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYPKELEKVYQILDNANSFVPKMQLHKALEELFGVY 419 Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 420 DFLNKLIAKEEPWVLHKNNELEKLEALLSLIANALLQSSFLLYAFMPKSAMKL 472 >gi|299116975|emb|CBN75079.1| Methionine--tRNA ligase [Ectocarpus siliculosus] Length = 837 Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 187/481 (38%), Positives = 283/481 (58%), Gaps = 14/481 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +RE+ Y++TAI Y N +PHIGHAYE I +DVL+R+ R+ G V+F TG+DEHGQKIA A Sbjct: 119 KRERFYLTTAINYTNGEPHIGHAYEAIASDVLSRYQRMSGKRVIFQTGSDEHGQKIANTA 178 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ D+ + F+++ L IS D ++RTT H +T + LW+ +D GDI+ G Sbjct: 179 AKLGLQPIDICDKYAGKFQELNKRLLISNDLYMRTTSALHKETSQRLWQICADAGDIFLG 238 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y GWY R+E Y D + + AD + +A +P++ M E YFF++ Y + L+ Y Sbjct: 239 KYEGWYDEREEKYVTDSDA-ELAD--FKDAFGSPLKRMSEASYFFKMGKYIEWLIQYITD 295 Query: 183 HPEFILPIERRNEVISFVKSGLK-DLSLSRKTFDWGIKIPD--DPQYIMYVWIDALTNYL 239 +P FI P R +++ +++G + DLS+SR TF GI +P D ++MYVW DALTNYL Sbjct: 296 NPSFIQPETHRLNILTRLQNGHQNDLSVSRTTFKHGIPVPVGFDQAHVMYVWFDALTNYL 355 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 + LD+ D + FWPA +HVIGKDI FH + WP L SA LPLPK V++HGF+ Sbjct: 356 SGIHALDS-DNPMSAFWPASVHVIGKDITWFHCVIWPCILKSAGLPLPKTVYAHGFVAAA 414 Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 G K+SKSLGNVIDP ++ ++ VD R+++ RE G D + K L N++L N Sbjct: 415 DGRKMSKSLGNVIDPHDICDQYAVDTFRWYICREAIFGCDLSFSKRALVLAHNSELCNTF 474 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNLV RS+S++ K +G +P + + R ++ + N + A A + Sbjct: 475 GNLVHRSLSLMHKYNNGNVPERQVGFDFFPFDFAATRR---DVDAAITNYALQDACAVAM 531 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFDI 476 + E +++ +PW ++K + DR + + V +E + +A LL AF+P ++F+ Sbjct: 532 EALRETNKFLQESEPW-MRKGDEDRPYRLECVRVCLEAVYCVAHLLVAFLPTACTRVFEK 590 Query: 477 L 477 L Sbjct: 591 L 591 >gi|146323739|ref|XP_752043.2| methionyl-tRNA synthetase [Aspergillus fumigatus Af293] gi|129557560|gb|EAL90005.2| methionyl-tRNA synthetase, putative [Aspergillus fumigatus Af293] Length = 574 Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 186/490 (37%), Positives = 267/490 (54%), Gaps = 19/490 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAA 62 ++ Y++T I Y NA PH+GH Y M+I D+L R+ L G D TGTDEHG KI +AA Sbjct: 52 KKPYYVTTPIFYVNAAPHVGHFYTMVITDILKRWRVLLGDKDAQLLTGTDEHGMKIQQAA 111 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ + F D N + F+ +A ++ Y+ FIRTT+ H + + W+ ++ +G IY Sbjct: 112 SAAGMDPQAFCDMNCKTFQALAKAANVDYNHFIRTTDPAHKEAVQYFWEMLNHRGYIYTA 171 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDKL 176 + GWYS+ DE +Y +V D V+W E Y FRLSA+Q++L Sbjct: 172 KHEGWYSVSDETFYPPTQVQNSLDPSTGRKIMVSVETGKEVEWSSETNYHFRLSAFQERL 231 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDA 234 L Y S +FI P +V+ V SGL DLS+SR + WGI +P D +YVW+DA Sbjct: 232 LELYRST-DFITPSNYMADVVKSVSSGLSDLSISRPVERLTWGIPVPGDETQTIYVWLDA 290 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L NYLT GY P WPAD+HVIGKDI+RFH +YWPAFL++ +LPLP++V HG Sbjct: 291 LINYLTKAGYPFPPGQEGRLGWPADVHVIGKDIVRFHCVYWPAFLMALDLPLPRRVLIHG 350 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 EK+SKS GNV++P I+ GVD +R+FL + D YD + + L Sbjct: 351 HWTINREKMSKSTGNVVNPFFAIDRFGVDTMRFFLAFQGGLAGDADYDNSYIIRDYKKLL 410 Query: 355 ANGIGNLVSRSVSMI---LKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 GIGNL R++ L+ Y D A T D S+ + ++ E M+ Sbjct: 411 QWGIGNLTHRTIGCAKGNLRSYIADAAADKLPAPTPEDLEHQSLLEQTPDKVAEQMEKLN 470 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 AL +++++ + ++YF A +PW+ P + LY E +R ILLQ F+P Sbjct: 471 PRAALQDIMAIIEKTNKYFHAAEPWK----TPAGSQRALYNVAESLRISGILLQPFMPSK 526 Query: 470 ANKIFDILFV 479 + ++ DIL V Sbjct: 527 STELLDILRV 536 >gi|159125043|gb|EDP50160.1| methionyl-tRNA synthetase, putative [Aspergillus fumigatus A1163] Length = 574 Score = 339 bits (869), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 185/490 (37%), Positives = 267/490 (54%), Gaps = 19/490 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAA 62 ++ Y++T I Y NA PH+GH Y M+I D+L R+ L G D TGTDEHG KI +AA Sbjct: 52 KKPYYVTTPIFYVNAAPHVGHFYTMVITDILKRWRVLLGDKDAQLLTGTDEHGMKIQQAA 111 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ + F D N + F+ +A ++ Y+ FIRTT+ H + + W+ ++ +G IY Sbjct: 112 SAAGMDPQAFCDMNCKTFQALAKAANVDYNHFIRTTDPAHKEAVQYFWEMLNHRGYIYTA 171 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDKL 176 + GWYS+ DE +Y +V D V+W E Y FRLSA+Q++L Sbjct: 172 KHEGWYSVSDETFYPPTQVQNSLDPSTGRKIMVSVETGKEVEWSSETNYHFRLSAFQERL 231 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDA 234 L Y S +FI P +V+ + SGL DLS+SR + WGI +P D +YVW+DA Sbjct: 232 LELYRST-DFITPSNYMADVVKSISSGLSDLSISRPVERLTWGIPVPGDETQTIYVWLDA 290 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L NYLT GY P WPAD+HVIGKDI+RFH +YWPAFL++ +LPLP++V HG Sbjct: 291 LINYLTKAGYPFPPGQEGRLGWPADVHVIGKDIVRFHCVYWPAFLMALDLPLPRRVLIHG 350 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 EK+SKS GNV++P I+ GVD +R+FL + D YD + + L Sbjct: 351 HWTINREKMSKSTGNVVNPFFAIDRFGVDTMRFFLAFQGGLAGDADYDNSYIIRDYKKLL 410 Query: 355 ANGIGNLVSRSVSMI---LKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 GIGNL R++ L+ Y D A T D S+ + ++ E M+ Sbjct: 411 QWGIGNLTHRTIGCAKGNLRSYIADAAADKLPAPTPEDLEHQSLLEQTPDKVAEQMEKLN 470 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 AL +++++ + ++YF A +PW+ P + LY E +R ILLQ F+P Sbjct: 471 PRAALQDIMAIIEKTNKYFHAAEPWK----TPAGSQRALYNVAESLRISGILLQPFMPSK 526 Query: 470 ANKIFDILFV 479 + ++ DIL V Sbjct: 527 STELLDILRV 536 >gi|109947187|ref|YP_664415.1| methionyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba] gi|109714408|emb|CAJ99416.1| metS [Helicobacter acinonychis str. Sheeba] Length = 643 Score = 339 bits (869), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 191/480 (39%), Positives = 292/480 (60%), Gaps = 20/480 (4%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K I+T I Y N PHIGHAY +IAD L +++ L G +V F TGTDEHGQKI ++A+ Sbjct: 2 QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSAKL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K + D S F++ D ++ YD FIRTT+ H + ++ + +KGDIYKG Y Sbjct: 62 RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDNEHQKCVQNAFEIMFEKGDIYKGTY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 SG+Y + E+Y + + +EEE YFFRLSAY+ LL +Y +P Sbjct: 122 SGYYCVSCESYCAISKADNINNKVLCPDCLRETTLLEEESYFFRLSAYEKPLLEFYAKNP 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241 E ILPI R+NEV SF++ GL DLS++R +F+WGI +P +DP++++YVW+DAL NY + Sbjct: 182 EVILPIYRKNEVTSFIEQGLLDLSITRTSFEWGILLPKKMNDPKHVVYVWLDALLNYASA 241 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GYL+ + F A H++GKDILRFHAIYWPAFL+S LPL K++ HG+ +G Sbjct: 242 LGYLNGLENKMVHFECAR-HIVGKDILRFHAIYWPAFLMSLGLPLFKQLCVHGWWTIEGV 300 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-------QLIHRAL 414 ++R + M K ++ ++ E I + + L+++ + + N +H+AL Sbjct: 361 LNRLLGMAKKYFN--------YSLKSEKITTYYPKELEKVHQILDNANSFVPKMQLHKAL 412 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ + +++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 413 EELFGVYDFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAMKL 472 >gi|195446223|ref|XP_002070684.1| GK10894 [Drosophila willistoni] gi|194166769|gb|EDW81670.1| GK10894 [Drosophila willistoni] Length = 581 Score = 338 bits (868), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 184/502 (36%), Positives = 276/502 (54%), Gaps = 26/502 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQNA 65 Y++T I Y NA PHIGH Y +IAD R+ RL DVL TGTDEHG KI +AA Sbjct: 22 YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRHPNADVLLCTGTDEHGTKIQQAAAGH 81 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 V + D+ S+ +RD+ I DDFIRTTE+RH W+K+ D G IY YS Sbjct: 82 KVPVGQYCDEISQRYRDVFQAAHIQNDDFIRTTEERHKQAVSHFWRKLHDNGHIYSAAYS 141 Query: 126 GWYSLRDEAYYNDDEV-YKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY + DE + D ++ A G Y+ + +PV+W EE Y FRLS +QD + + + Sbjct: 142 GWYCVSDEVFLTDSQLRLDEASGMRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKQE 201 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241 I P + ++ + L D+S+SR + W I +P D +YVW+DAL NYL++ Sbjct: 202 AR-IRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPGDDSQTVYVWLDALVNYLSS 260 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY P+ AK WP +IGKDIL+FH IYWPAFL++A L P++++ H G+ Sbjct: 261 LGY---PNEKFAKHWPPAQQIIGKDILKFHGIYWPAFLMAAGLEPPRQLYVHSHWTVDGQ 317 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS NV+DP++ +E ++ LRYFL+RE DG Y + +N++LA+ +GNL Sbjct: 318 KMSKSKHNVVDPVKAAQEYTMEGLRYFLLREGVAHSDGNYSHVKALRILNSELADTLGNL 377 Query: 362 VSRSVSMIL-----------KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410 +SR+ + L ++ ++ A +ES+L + R Q N Sbjct: 378 LSRACAKSLNPTQIYPALHSEELTELLHNLDAAKRLEESLLQLAERCQQHYECNH----F 433 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 H ++ + + +F++ KPWELK N R T++ +T++V+R I+LQ +P+L Sbjct: 434 HLVADTTMATLHAANNFFESSKPWELKGGINAQRLETIIGMTMDVLRLCGIVLQPIIPQL 493 Query: 470 ANKIFDILFVADENRCFQSLDQ 491 A ++ D L + RC+ L + Sbjct: 494 ATQLLDKLSLPGSQRCWSRLSE 515 >gi|224008408|ref|XP_002293163.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335] gi|220971289|gb|EED89624.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335] Length = 554 Score = 338 bits (868), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 191/495 (38%), Positives = 283/495 (57%), Gaps = 32/495 (6%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL-----DGLDVLFTTGTDEHGQKIAKA 61 YI+TAI Y N H+GHAYE D +ARF RL +G F TG DEHG+KIAK Sbjct: 6 FYITTAINYTNGPAHMGHAYEAATTDAIARFARLKCSPENGDTAYFVTGADEHGEKIAKT 65 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G + F+ + + +S DD++RTT RH T + LW K + DIY Sbjct: 66 AEKEGKEPIDICNTYVTGFQCLNQRILVSNDDYVRTTSDRHKRTAQALWLKCAANDDIYL 125 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYY--NAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 YSGWY++++EA+ D E A+ Y A P+Q ++E YFF++S Y D+L+ + Sbjct: 126 DQYSGWYNVKEEAFVTDSE----AELCNYIDEATGQPLQRVQEASYFFKMSNYHDRLVEH 181 Query: 180 YESHPEFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPD--DPQYIMYVWIDALT 236 ESHPEFI P RN +++ + L+DLS+SR TF GI +P+ + ++MYVW DALT Sbjct: 182 IESHPEFICPESHRNAILARLNGDRLRDLSVSRTTFTHGIPVPEGFEKNHVMYVWFDALT 241 Query: 237 NYLTTTGYLD--NPDGSK----AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV 290 NYL+ L N DGSK K WPAD+H+IGKDIL FH + WP L+SA +PLPK V Sbjct: 242 NYLSGVNALGVCNEDGSKDEELVKLWPADVHIIGKDILWFHTVIWPCILMSAGIPLPKTV 301 Query: 291 FSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 F+HGF+ K G+K+SKS+GNV+DP +++++ VD+ R++L +E G + + +D ++ Sbjct: 302 FAHGFVNDKEGKKMSKSVGNVVDPHDMLDKFDVDSFRWYLCKEAPYGGELSFSEDNMRDM 361 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVCSRVLQEIRENMQ 406 NADL + +GN+V R + K DG+I P+P E+ + V + M+ Sbjct: 362 HNADLCDTLGNMVHRVTKLCGKYCDGVIMDVPSP-------ETAVLDFDAVRKAYVAKME 414 Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAF 465 + I +V+ Y ++PW+LK ++ V+ T+E + +A LL F Sbjct: 415 VMALEGGANIAIQACRDVNGYLTKEEPWKLKGDEFTEKRQVVVRATLEAVYAVAHLLLPF 474 Query: 466 VPKLANKIFDILFVA 480 +PK A++I + A Sbjct: 475 IPKGASEIMKKMNTA 489 >gi|212537687|ref|XP_002148999.1| methionyl-tRNA synthetase, putative [Penicillium marneffei ATCC 18224] gi|210068741|gb|EEA22832.1| methionyl-tRNA synthetase, putative [Penicillium marneffei ATCC 18224] Length = 583 Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 186/492 (37%), Positives = 274/492 (55%), Gaps = 17/492 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAA 62 ++ Y++T I Y NA PH+GH Y M++ DV+ R+ +L G + +F TGTDEHG KI +AA Sbjct: 54 KKPFYVTTPIFYVNAAPHVGHLYSMVLGDVIKRWQQLKGNTNAIFLTGTDEHGIKIQQAA 113 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 Q AG+ T+ F D N + F+D+A IS D FIRTT++ H D R W+ + +G IY Sbjct: 114 QEAGMDTQSFCDMNCKTFKDLARAAKISNDHFIRTTDEAHKDAVRYFWESLQHRGYIYTK 173 Query: 123 CYSGWYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 + GWYS+ DEA+Y +V G V+W E Y FRLSA++D+L Sbjct: 174 KHEGWYSVSDEAFYPQSQVEPSLDPATGRKRMISTETGKEVEWSSEINYHFRLSAFKDRL 233 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDA 234 L +YE +P+FIL + V++ L+DLS+SR + WG+++P D +YVW+DA Sbjct: 234 LEFYEQNPKFILAKNHMRHLKKTVEADLQDLSISRPVERLTWGVRVPGDDSQTIYVWLDA 293 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L NYLT GY P WPADLH++GKDI+RFH IYWPAFL++ +LPLP+ V HG Sbjct: 294 LINYLTKAGYPFTPGKESDLGWPADLHIVGKDIVRFHCIYWPAFLMALDLPLPRHVLVHG 353 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 K+SKS GNV++P I+ VD +R+FL D Y+ + + L Sbjct: 354 HWTMNKAKMSKSTGNVVNPFFAIDRFSVDVMRFFLTLRGPLIDDSNYENNNIVNDYKKYL 413 Query: 355 ANGIGNLVSRSVSMI-LKDYDGMIPTPGAF-TESDESILSVCSRVLQE----IRENMQNQ 408 G+GN+ R + + LK + F TE++E+ + + LQE + M+ Sbjct: 414 QYGVGNVYQRLMGVARLKLRPSIDAAKSGFSTEANENDMEF-EKYLQELPAIVDRFMEAF 472 Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468 AL +++ + YF PWE K + R + VLY E +R ILLQ F+P+ Sbjct: 473 NSKAALRELVDGAMKAQNYFHRSAPWE-HKDDLTRCARVLYNVSEFLRISGILLQPFMPQ 531 Query: 469 LANKIFDILFVA 480 ++++ D + V+ Sbjct: 532 KSSELLDRIGVS 543 >gi|209881209|ref|XP_002142043.1| methionyl-tRNA synthetase family protein [Cryptosporidium muris RN66] gi|209557649|gb|EEA07694.1| methionyl-tRNA synthetase family protein [Cryptosporidium muris RN66] Length = 556 Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 184/474 (38%), Positives = 270/474 (56%), Gaps = 14/474 (2%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++TAI Y N PHIGHAYE+I++D + R R+ G + F TGTDEHG K A A N Sbjct: 32 FYLTTAINYINGVPHIGHAYEIIVSDAIVRIARIFGYNTRFMTGTDEHGLKNATVASNNN 91 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T K D N F++M L+IS D FIRTT+K H+ C +WK+ D GDIY G Y+G Sbjct: 92 MTPKELCDLNVIKFKEMNKKLNISTDRFIRTTDKDHYKACEEIWKRCMDSGDIYLGIYTG 151 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNA-QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 WYS+++E + + E Y ++ P+ M+E YFFRL+ Y + ++ +P Sbjct: 152 WYSIKEETFVTELE---AKMTNYLDSITGTPLVKMDEPSYFFRLTKYLPSVHAHILENPN 208 Query: 186 FILPIERRNEVISFVKS--GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 FI P R+ ++S + + DLS+SR TF WG+ +P+DPQ++MYVW DALTNY+T Sbjct: 209 FIQPEILRDNILSRLDNMQNPADLSISRITFSWGVPVPNDPQHVMYVWFDALTNYITGLN 268 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302 + + + +W +H++GKDI FH I WPA L+SAN+PLPK +F HGF+ G+K Sbjct: 269 WPNEDNELWKTYWSNTIHIVGKDIAWFHCIIWPAMLMSANIPLPKTIFGHGFVTASDGKK 328 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKSL NV+DP+E IE VG D RY++ RE G D ++ + N +LA+ GNLV Sbjct: 329 MSKSLENVVDPLEQIELVGTDTFRYYICREGKFGYDFKFNTTSIVDYHNGELADSFGNLV 388 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV-ISLV 421 SR+ ++ K G++P A S + C + + E N+ AQ+ + Sbjct: 389 SRTTNLAHKFCGGIVP---AKLCSSKISKPFCPKGVLERYGYSWNKYRLEECAQISMHTC 445 Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 EV+++ PW T+ DR ++ + +E I LA L+ F P +I Sbjct: 446 REVNKFLTDNAPWNKSNDLTDEDRIE-IIRIVLESIYYLAHLMAPFTPNACEQI 498 >gi|85101208|ref|XP_961106.1| hypothetical protein NCU03759 [Neurospora crassa OR74A] gi|30580531|sp|Q9C2H9|SYMM_NEUCR RecName: Full=Probable methionyl-tRNA synthetase, mitochondrial; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|12718314|emb|CAC28665.1| probable METHIONYL-TRNA SYNTHETASE, mitochondrial [Neurospora crassa] gi|28922645|gb|EAA31870.1| hypothetical protein NCU03759 [Neurospora crassa OR74A] Length = 622 Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 186/508 (36%), Positives = 293/508 (57%), Gaps = 24/508 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + Y++T I Y NA PH+GH Y M++ DVL R+ L G + TGTDEHG K+ +AA Sbjct: 58 DNKPFYVTTPIFYVNASPHVGHMYSMVLGDVLKRWQTLKGNQAILCTGTDEHGTKVQRAA 117 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + K F D NS F+++A I YD F+RTT++ H + + W + +KG IY+ Sbjct: 118 IANDMDPKQFCDLNSAKFQELAAACRIDYDRFMRTTDQDHVEAVKHFWLLLKEKGLIYEA 177 Query: 123 CYSGWYSLRDEAYYNDDEVYKGAD---GQYYNA---QHNPVQWMEEEGYFFRLSAYQDKL 176 + GWY + DE +Y + ++ K D G+ Y A N V+W+EE+ Y FR++A +D+L Sbjct: 178 KHEGWYCVSDECFYPESQLEKRQDPFTGEVYVASIESGNKVEWIEEKNYHFRMTALKDQL 237 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDA 234 L +Y+++P++I+P R N+V+ +V + L+DLS+SR WGI++PDD +YVW+DA Sbjct: 238 LEFYKNNPDWIVPQTRMNQVVDWVTNNLEDLSISRPVSRLSWGIRVPDDESQTIYVWVDA 297 Query: 235 LTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 L NY+T GY P G + WP D+HVIGKDILRFH IYWPA LL+ +LPLPK++ SH Sbjct: 298 LINYITMAGYPYWPPGREHLGGWPVDVHVIGKDILRFHCIYWPALLLALDLPLPKRILSH 357 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 + +K+SKS+GNV++P +E G+D +R++++ D Y D L Sbjct: 358 AHWTMEKKKMSKSIGNVVNPFYAMERFGIDTMRFYMIHNGGIANDADYSNDWLTVEYKKH 417 Query: 354 LANGIGNLVSR-------SVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENM 405 L NG+GNL +R S+ ++ Y DG + + ++S + +R L ++ + Sbjct: 418 LQNGVGNLSARVTRPKQWSLRRAVQSYQDGNMLLQSTGEQINDSCVEHITR-LDKLASTI 476 Query: 406 QNQLIH----RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLA 459 N+++ AL +++ L+ E + + +PW + K A ++ E +R Sbjct: 477 DNEMLQLNPSHALQKIMGLIGETNAFISNAEPWVIVKKQDSEALVDRIILTAGESLRIAG 536 Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQ 487 ILLQ F+P A ++ D+L V + NR F Sbjct: 537 ILLQPFMPDKAAQLLDLLGVENHNRTFH 564 >gi|328766262|gb|EGF76318.1| hypothetical protein BATDEDRAFT_14978 [Batrachochytrium dendrobatidis JAM81] Length = 554 Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 194/539 (35%), Positives = 299/539 (55%), Gaps = 38/539 (7%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 +YI++ I Y NA PHIGH Y I+AD L R+ G +++TGTDEHG KI +AA+ A Sbjct: 17 VYITSPIFYVNAVPHIGHLYSAILADSLKRWFEFKGQKTMYSTGTDEHGLKIQQAAEAAK 76 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 K F + S+ F+ + DISY FIRTT+ H++ + LW+ + G +YKG + G Sbjct: 77 SDPKEFCNDISKTFKSLFKKSDISYTRFIRTTDSDHYEAVKALWECLERGGFLYKGYHEG 136 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQH------NPVQWMEEEGYFFRLSAYQDKLLSYY 180 WY + DE +Y + ++ A H V+W +EE Y F+LSA++DK + + Sbjct: 137 WYCVSDETFYPESQIEASAADPSIMVCHISKESGKVVEWTKEENYKFKLSAFRDKTIEWL 196 Query: 181 ESHPEFILPIERRNEVISFVKSGLK-DLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTN 237 +++P+ I+P + N V+S +K G + DLS+SR WGI +P+D +++YVW+DAL N Sbjct: 197 KANPKVIVPESQYNFVLSQLKKGEQTDLSVSRLRSRISWGIPVPNDDTHVIYVWLDALVN 256 Query: 238 YLTTTGYLDNPDG-------SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV 290 YLT Y P + WPA +HV+GKDI++FHAIYWPAFL++A LPLP+K+ Sbjct: 257 YLTVAKYPWTPSKDVQMSEIAAQNGWPAHIHVVGKDIIKFHAIYWPAFLMAAGLPLPQKI 316 Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350 SHG L +K+SKS+GNV++P +IE+ GVD +RYFL+R+ D + + R Sbjct: 317 ISHGHWLMNHQKMSKSVGNVVEPNALIEKWGVDPVRYFLMRDGVINNDPEFSDKLIFSRY 376 Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQ 408 DL + +GNLV R VS + G IP T ++ + S + ++ + M Sbjct: 377 KNDLGDQLGNLVMR-VSTPRINQSGEIPLATDEPLDDTGVKKMEQLSTLADQVDQCMIQG 435 Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWEL-------KKTNPDRASTVLYVTVEVIRQLAIL 461 + AL + +++++++Y+ +PW++ K NP + +VL+V E +R A+L Sbjct: 436 NVADALQHIQEMIADLNKYWTDAEPWKMANAARSDSKPNP-KLQSVLFVAYEGLRICALL 494 Query: 462 LQAFVPKLANKIFDILFVADENRCFQSL----------DQRLKPGFMLHKTFDPIFPRF 510 LQ +P + D L V R F + + KP +L K P+FPR Sbjct: 495 LQPVMPTKMTNLLDTLDVDCTERTFFNAYPGKRYYHLKNTFKKPPTLLSKQ-PPLFPRI 552 >gi|328477979|gb|EGF47895.1| methionyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462] Length = 585 Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 172/445 (38%), Positives = 274/445 (61%), Gaps = 11/445 (2%) Query: 77 SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYY 136 + + + +L+I+ D FIRTT+K H + + + +++ +GD+Y G Y+GWYS+ DE Y+ Sbjct: 2 AAQIKQLWKMLEITNDKFIRTTDKEHVEAVQEIVERLIKQGDVYLGEYTGWYSVEDEEYF 61 Query: 137 NDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190 + EVY+ DG+ + + VQ + E YFF++S Y D+LL YY+ HP+F+ P Sbjct: 62 TESQLSEVYRDKDGKVIGGKAPSGHEVQLVHEPSYFFKMSKYTDRLLKYYDEHPDFVQPA 121 Query: 191 ERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD 249 R+ E+I+ F+K GL+DL++SR +F+WG++IP DP++++YVW+DAL NY+T GY N Sbjct: 122 SRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVDALLNYITALGYGSNDH 181 Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309 K+WPA++ +IGK+I+RFH IYWP L++ +LPLPKK+++HG+++ K K+SKS GN Sbjct: 182 ALFDKYWPANVQLIGKEIVRFHIIYWPIILMALDLPLPKKIYAHGWLVMKDGKMSKSKGN 241 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 I P ++E G+DALRY+L+R I G DG + + R+N DLAN +GNL++R+++MI Sbjct: 242 AIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYDLANDLGNLLNRTIAMI 301 Query: 370 LKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428 K DG++P T D+ + V L + + M AL QV +VS ++Y Sbjct: 302 NKYEDGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSDALDQVWKIVSRANKYI 361 Query: 429 DAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 D +PW+L K D+ +V+ E +R +A+L+Q + +IF L + EN Sbjct: 362 DETEPWKLAKDPAKKDQLDSVMAHLAESLRLIALLIQPVMTHAPVQIFGQLGLDHENEDH 421 Query: 487 QSLDQRLKP-GFMLHKTFDPIFPRF 510 + + P G + + PIFPR Sbjct: 422 KVVKWGALPAGAKVVEQGTPIFPRL 446 >gi|167751097|ref|ZP_02423224.1| hypothetical protein EUBSIR_02082 [Eubacterium siraeum DSM 15702] gi|167656015|gb|EDS00145.1| hypothetical protein EUBSIR_02082 [Eubacterium siraeum DSM 15702] Length = 605 Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 173/453 (38%), Positives = 277/453 (61%), Gaps = 8/453 (1%) Query: 40 LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99 + G DV+F TGTDEHGQKI A GVT K +VD+ NF+ + + + ISYD FIRTT+ Sbjct: 1 MQGYDVMFLTGTDEHGQKIELKAAEKGVTPKEYVDEIVANFKRLWETMHISYDRFIRTTD 60 Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159 H +T + ++KK+ +KG IYKG Y G Y E+++ + ++ DG+ + V+ Sbjct: 61 DYHIETVQKIFKKLYEKGYIYKGTYKGKYCTPCESFWTESQL---VDGKCPDCGRE-VKE 116 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGI 218 EE YF RLS + DK+ + + +++ P R NE+++ F+K GL+DL +SR +F WGI Sbjct: 117 ANEEAYFLRLSDFADKIEKFL-TETDYLQPKSRVNEMVNNFIKPGLEDLCVSRTSFTWGI 175 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 + D ++++YVW+DAL+NY++ GY + K+WPAD+H+ K+I+RFH+I WP Sbjct: 176 PVDFDSKHVVYVWVDALSNYISALGYGNEKYNDFEKYWPADMHMTAKEIVRFHSIVWPII 235 Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 L+ +LPLPK ++ HG+I G+K+SKS GNV+DP + E GVDA+RY ++R++ G D Sbjct: 236 LMMLDLPLPKHLYGHGWINFNGDKMSKSKGNVVDPFVLCERYGVDAVRYQILRDMPYGSD 295 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398 + + + R+NADLAN +GNLVSR+V+M K + G +PT + D+ ++ + + Sbjct: 296 CNFTNELMLTRINADLANDLGNLVSRTVAMADKYFGGTLPTDRVSDDLDDQLIGMAQSLC 355 Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIR 456 + ++ +AL ++ ++S ++Y D PW L K +N R +TVLY +E IR Sbjct: 356 DTVTPLIEQAQHSKALEEIFKVISRANKYIDETAPWVLAKDESNNARLATVLYNLLETIR 415 Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSL 489 + LL F+P ++++ + E+ F L Sbjct: 416 ICSALLSPFMPATMPEVWEQIGAGAEDTAFDKL 448 >gi|302833559|ref|XP_002948343.1| hypothetical protein VOLCADRAFT_58186 [Volvox carteri f. nagariensis] gi|300266563|gb|EFJ50750.1| hypothetical protein VOLCADRAFT_58186 [Volvox carteri f. nagariensis] Length = 643 Score = 337 bits (863), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 190/488 (38%), Positives = 276/488 (56%), Gaps = 14/488 (2%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+T + Y NA PH+G AY I ADV +RF RL G V F TGTDEHG+KIA AA G++ Sbjct: 71 ITTPLYYVNAAPHMGSAYPTIAADVASRFQRLLGKRVRFLTGTDEHGEKIAAAASGRGLS 130 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D + D+ D LDI YD F+RTTE R + + + ++GDIY Y GWY Sbjct: 131 PQEHCDDIVAQYTDLWDKLDIQYDRFVRTTESRLAELVVDVLVRCWERGDIYSADYEGWY 190 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + E + + P Q +E YFFRLS Y K + S +F+ Sbjct: 191 CVDCEEFKGQSE----SQPRGCPTHRKPCQHRKEANYFFRLSKY-SKWIEELLSREDFVQ 245 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P RRNE++S+V+ GL+D S+SR DWGI++P DP++ +YVW DAL YL+ D P Sbjct: 246 PASRRNELMSYVREGLRDFSISRAAVDWGIRVPQDPKHTVYVWFDALIGYLSGLLPPDVP 305 Query: 249 DGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + WPA +HVIGKDILRFHAIYWP LLSA LPLP++V+ HGF+ G K+ K Sbjct: 306 ATTSEVPVHGWPASVHVIGKDILRFHAIYWPGMLLSAGLPLPQRVYGHGFLTKDGLKMGK 365 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 +LGN +DP ++ G DA+R + ++EI G+DG + + + VNA LAN +GN ++R+ Sbjct: 366 ALGNTLDPRALVAAYGADAVRLYFMKEIVFGQDGDFSEVRFRDAVNAALANNLGNGLNRT 425 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 ++++ K +D IP + +D + + + L H A V++L S + Sbjct: 426 LNLLAKFHDRTIPVDASSLPADLPLRQMAAERLPAAASAYSALSFHEAAEAVLALASRSN 485 Query: 426 RYFDAQKPWELKKTNPDR----ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 +Y + +PW K D A+ VL +E +R +A+ L A P L+ +I+ L ++ Sbjct: 486 QYLEETQPWTKLKKGSDEEKAEAAAVLVAVLEAVRIVAVGLVALTPGLSRRIYSQLGFSE 545 Query: 482 ENRCFQSL 489 E FQ+L Sbjct: 546 EQ--FQAL 551 >gi|326482096|gb|EGE06106.1| methionine-tRNA synthetase [Trichophyton equinum CBS 127.97] Length = 592 Score = 336 bits (862), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 185/498 (37%), Positives = 276/498 (55%), Gaps = 24/498 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y NA PHIGH Y ++IAD+L R+ L G D TGTDEHG KI +AA G Sbjct: 56 YVTTPIFYVNAAPHIGHLYTILIADILKRWQVLLGNGDAKLLTGTDEHGMKIQQAALQNG 115 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + + D+N F+ +A + SYD FIRTT+ H + W+ ++ +G IY+G + G Sbjct: 116 LEPQALCDRNCETFKLLAREANASYDHFIRTTDSAHKAAVQFFWENLNHRGYIYEGKHEG 175 Query: 127 WYSLRDEAYYNDDEVYKGAD---GQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSYY 180 WYS+ DE +Y V+ D G+ A V++ +E Y F+LSA+QD+LL +Y Sbjct: 176 WYSVSDETFYPASAVHSTLDPATGRKMMASIETGKEVKFSQETNYHFKLSAFQDRLLEHY 235 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238 +P+FI P + ++ V SGL+DLS+SR WGI +P D +YVW+DAL NY Sbjct: 236 RKNPKFIQPKVYMDSIVQNVASGLQDLSISRPVDRLSWGIPVPGDTTQTIYVWLDALVNY 295 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 +T GY P + WPAD+HV+GKDI RFH IYWPAFL++ +LPLP+ + +H Sbjct: 296 ITYAGYPFTPGREQESIWPADIHVVGKDITRFHCIYWPAFLMALDLPLPRTILTHAHWTM 355 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K+SKS GNV++P+ + GVD +R++L D YD + + L G+ Sbjct: 356 NHSKMSKSTGNVVNPMFAMARYGVDPMRFYLAMNGGLASDTDYDNSYIVRDYKNILQGGL 415 Query: 359 GNLVSRSVS----MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----I 410 GNL SR + + + M G+ D S + L+++ + NQ+ Sbjct: 416 GNLCSRVMRGKGWNVRESVVKMANGQGSRRAKDPSEIEHM-EFLEKVPGLVSNQMDELNP 474 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKK---TNP---DRASTVLYVTVEVIRQLAILLQA 464 RAL +++ ++ + +RY + PW L K T+P D+ V+Y E +R ILLQ Sbjct: 475 RRALEEIVKIIDQTNRYVQSTGPWNLAKEASTDPTAHDQLVGVIYNATESLRIAGILLQP 534 Query: 465 FVPKLANKIFDILFVADE 482 F+P+ A K+ D+L V ++ Sbjct: 535 FMPEKAKKLLDMLGVEED 552 >gi|219117325|ref|XP_002179457.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409348|gb|EEC49280.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 643 Score = 335 bits (860), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 184/482 (38%), Positives = 281/482 (58%), Gaps = 22/482 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-VLFTTGTDEHGQKIAKAA 62 + Y++TAI Y N H+GHAYE +DV+ R+ RL G V F TG DEHGQKIA+ A Sbjct: 106 KSSFYLTTAINYTNGPAHMGHAYEAATSDVIVRYQRLLGTHPVYFVTGADEHGQKIAQTA 165 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 +AG DQ F+ + + I+ DD++RTT RH + LW++ +D GDIY Sbjct: 166 ADAGKVPIDICDQYVTGFQVLNQRILIANDDYVRTTSARHKQLAQTLWQRCADAGDIYLD 225 Query: 123 CYSGWYSLRDEAYYNDDEV----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 YSGWY++R+E + D E YK P++ +EEE YFF++S Y +L++ Sbjct: 226 TYSGWYNVREETFVTDMEAQQLDYKDPTSGL------PLKQVEEESYFFKMSKYHAQLVA 279 Query: 179 YYESHPEFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDAL 235 + ES+PEFI P RN++++ + + L+DLS+SR TF WGI +P + ++MYVW+DAL Sbjct: 280 HIESNPEFIQPDAHRNQILARLHTDELRDLSISRTTFSWGIPVPQNFKNNHVMYVWVDAL 339 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 +NYLT Y + FWPA +H+IGKDIL FH + WP LLSA +PL +VF+HGF Sbjct: 340 SNYLTGIDYFGHQGTLLKSFWPASVHIIGKDILWFHTVIWPCLLLSAGIPLAHQVFAHGF 399 Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + + G+K+SKSLGNV+DP +++++ VD R++L +E G + + ++ ++ NADL Sbjct: 400 VNDREGKKMSKSLGNVVDPHDMLDKFDVDTFRWYLCKEAPFGGELSFSEESMRDMHNADL 459 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 + IGNLV R+ ++ K DG++P T ++ S V++ + M + Sbjct: 460 CDTIGNLVHRATNLCQKYCDGVVPDVPPPTNPPINLAS----VIKTFQARMDKLELQAGA 515 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV--TVEVIRQLAILLQAFVPKLANK 472 VI +V+ + + PW LKK + + + V +E I L+ LL F+P+ K Sbjct: 516 TVVIGAFRDVNGFLQEEAPW-LKKGDEHTETRRITVRACLEAIYALSHLLLPFLPQSMLK 574 Query: 473 IF 474 +F Sbjct: 575 VF 576 >gi|50364851|ref|YP_053276.1| methionyl-tRNA synthetase [Mesoplasma florum L1] gi|50363407|gb|AAT75392.1| methionyl-tRNA synthetase [Mesoplasma florum L1] Length = 509 Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 181/478 (37%), Positives = 277/478 (57%), Gaps = 13/478 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K Y++T I YP+ HIGHAY +AD+L R+ + G + F TG+DEHGQKI + A Sbjct: 3 KKFYVTTPIYYPSGNLHIGHAYTTTLADILKRYKDMQGYETFFLTGSDEHGQKIEEKATE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG+T +++ +F+ + L I Y FIRTT+ H +T + ++ + DKG IYKG Y Sbjct: 63 AGLTPIDYLEDKVESFKTLWKALKIDYTKFIRTTDSYHEETVKKIFTLLLDKGFIYKGNY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + E + N D++ + + N + ++ ++EE YF + S +Q+ + Sbjct: 123 EGLYCISCEEFLNADQIDENNMCKISNTK---LELVKEETYFLKTSLFQE-FMENEVLAS 178 Query: 185 EFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 EF++P RRNE++ SFVK LKDLS++R +F WGI I +DP++++YVW+DALTNY+T G Sbjct: 179 EFLIPAYRRNEMLNSFVKPELKDLSVTRTSFSWGIPINEDPKHVVYVWLDALTNYITALG 238 Query: 244 YLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 YL N D + KFW + L + GK+I+RFH+IYWP L S L P + HG+IL K Sbjct: 239 YLQNDDSNFQKFWADENTEILQLAGKEIIRFHSIYWPIILKSLGLRQPTHLLGHGWILSK 298 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKSLGNVIDPIE+I + G DALR+++ E+ KDG + D + NA LAN +G Sbjct: 299 DTKMSKSLGNVIDPIEMINKYGADALRFYIGYELPTEKDGNFTDDLFIESFNAHLANNVG 358 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL+SR MI K +DG I D+++ + + +NM I A+ ++ Sbjct: 359 NLISRINQMITKYFDGFIENDNIV--YDDNLTAKGIETINLYIQNMDQYKISDAIRNILD 416 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L + ++Y + PW L K ++ + V + R ++I++ P L D++ Sbjct: 417 LGNACNKYIEETMPWNLAK--EEKIDELKNVMATLQRNISIMVFLLKPILVENYEDMI 472 >gi|327304271|ref|XP_003236827.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892] gi|326459825|gb|EGD85278.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892] Length = 641 Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 184/498 (36%), Positives = 273/498 (54%), Gaps = 24/498 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y NA PHIGH Y ++IAD+L R+ L G D TGTDEHG KI +AA G Sbjct: 105 YVTTPIFYVNAAPHIGHLYTILIADILKRWQVLLGNGDAKLLTGTDEHGMKIQQAALQNG 164 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + + D+N F+ +A + S+D FIRTT+ H + W+ ++ +G IY+G + G Sbjct: 165 LEPQALCDRNCETFKVLAREANASHDHFIRTTDSAHKAAVQFFWENLNHRGYIYEGKHEG 224 Query: 127 WYSLRDEAYYNDDEVYKGAD---GQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSYY 180 WYS+ DE +Y V+ D G+ A V++ +E Y F+LSA+QD+LL +Y Sbjct: 225 WYSVSDETFYPASAVHSTLDPATGRKLMASIETGKEVKFSQETNYHFKLSAFQDRLLEHY 284 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238 +PEFI P + ++ V SGL+DLS+SR WGI +P D +YVW+DAL NY Sbjct: 285 RKNPEFIQPKVYMDSIVQNVASGLQDLSISRPVDRLSWGIPVPGDTTQTIYVWLDALVNY 344 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 +T GY P + WPAD+HV+GKDI RFH IYWPAFL++ +LPLP+ + +H Sbjct: 345 ITYAGYPFTPGREQESIWPADVHVVGKDITRFHCIYWPAFLMALDLPLPRTILTHAHWTM 404 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K+SKS GNV++P+ + GVD +R++L D YD + + L G+ Sbjct: 405 NHSKMSKSTGNVVNPMFAMARYGVDPMRFYLAMNGGLASDTDYDNSYIVRDYKNILQGGL 464 Query: 359 GNLVSRSV--------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410 GNL SR + ++K DG A +S+ + +V + M Sbjct: 465 GNLCSRVMRGKGWNVRESVVKMTDGQ-GNRRAKDQSEIEHMEFLEKVPGLVSNQMDELNP 523 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKK---TNP---DRASTVLYVTVEVIRQLAILLQA 464 RAL +++ ++ + +RY + PW L K T+P D V+Y E +R ILLQ Sbjct: 524 RRALEEIVKIIDQTNRYVQSTGPWNLAKEAGTDPMAYDLLVGVIYNATESLRIAGILLQP 583 Query: 465 FVPKLANKIFDILFVADE 482 F+P+ A K+ ++L V ++ Sbjct: 584 FMPEKAKKLLNMLGVEED 601 >gi|322434798|ref|YP_004217010.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9] gi|321162525|gb|ADW68230.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9] Length = 848 Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 218/631 (34%), Positives = 306/631 (48%), Gaps = 137/631 (21%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y NA+PHIGHAY I+ADVLAR R G F TGTDEHGQKI ++A AG Sbjct: 8 FYVTTPIYYVNARPHIGHAYTTIVADVLARRARAQGTPTWFLTGTDEHGQKIERSALAAG 67 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + + F DQ S +FRD+ + I+ D +IRTT++ H + L+ + KG IY Y+G Sbjct: 68 IPPQTFTDQVSASFRDLWKRMGITNDQYIRTTDEAHKKGVQKLFADLHAKGQIYLSTYTG 127 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 YS+ +E + G DG+ P + + EE +FFRLS YQ LL+ ES Sbjct: 128 QYSIGEEMFVEGPPGTIGPDGK-------PTETVTEENFFFRLSDYQLPLLNLIESDTLK 180 Query: 187 ILPIERRNEVISFVK------------------------------SGLKDLSLSRKTFDW 216 I P R+NEV+SF++ LKDLS+SR +F W Sbjct: 181 ITPEARKNEVLSFLRGNTSGAPGPDSGTWVSTDLKQSAKGILYLPGALKDLSVSRSSFTW 240 Query: 217 GIKIPDDP------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 GI +P+ ++++YVW+DAL NY+T GY + KFWPAD+H++GK+I+RF Sbjct: 241 GIPVPEPAASEAKEKHVIYVWLDALANYITALGYGSDDTTQFEKFWPADIHLVGKEIIRF 300 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI------------------- 311 H +YWPAFLL+A L LPK V +HG++L K+SKS GN++ Sbjct: 301 HCVYWPAFLLAAGLDLPKAVTAHGWLLFDDSKMSKSKGNIVRTETILDAFGTLLPPPAAL 360 Query: 312 --------------DPIEVIEEVG----------------------VDALRYFLVREIAC 335 P+ E G D LRYFL+REI Sbjct: 361 TSDALALGIRGGLQPPVNGTENEGALAPGSPTPPPEPTKQDQDLFAADVLRYFLLREIPF 420 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES--------- 386 G+DG + + L R NADLANG GNLVSR+++MI K +DG++P + S Sbjct: 421 GQDGSFTFEALITRYNADLANGYGNLVSRTLNMIHKYFDGVVPPSWVSSNSVVLESSVKE 480 Query: 387 ---------DESILSVCSRVLQE-------IRENMQNQLIHRALAQVISLVSEVDRYFDA 430 D S + +R+ E + N Q ++AL L+ +D + Sbjct: 481 SQLFDRFVNDNSSGTWVTRLPSEAVALSLAVGRNTQLLRFNKALEACSELIRLLDSDLTS 540 Query: 431 QKPWEL------KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--- 481 + PW++ + RAS VLY E IR + LL +P K++ L + D Sbjct: 541 KAPWKVIVGLSDDEMQEKRAS-VLYTAAESIRIITALLHPILPYATAKVWHQLGLGDIEL 599 Query: 482 --ENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509 N ++L L+PG L PIFPR Sbjct: 600 AAANGELKNLTWGGLQPGTKLGP-LSPIFPR 629 >gi|323451615|gb|EGB07492.1| hypothetical protein AURANDRAFT_71802 [Aureococcus anophagefferens] Length = 820 Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 172/390 (44%), Positives = 236/390 (60%), Gaps = 20/390 (5%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++TAI Y N PH+GHAYE ++ DV+AR+ RL G + F TG DEHGQKIA A G Sbjct: 105 FYVTTAINYANGSPHMGHAYEALVTDVVARYWRLWGAETHFLTGADEHGQKIANTAAKEG 164 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VD+ F+ + LD+SYDD++RTT +RH CR LW++ S GD++ Y G Sbjct: 165 KRPIELVDECVAKFKALDARLDVSYDDYLRTTSERHKACCRELWRRCSASGDVFLERYDG 224 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYN---AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 WY R E + K +D Q N A P++ EE YFF+L Y + ++ ++ Sbjct: 225 WYDERAECF------VKASDAQLQNFCDADGIPLKRTSEECYFFKLGKYAPAIRAHVLAN 278 Query: 184 PEFILPIERRNEVISFVKSG--LKDLSLSRKTFDWGIKIPD--DPQYIMYVWIDALTNYL 239 P F+ P RR EV+ + ++ LS+SR TFDWG+ +P+ D ++MYVWIDALTNY+ Sbjct: 279 PHFVEPESRRKEVLLMLDDAEDIEKLSISRTTFDWGVGLPEGFDAGHVMYVWIDALTNYV 338 Query: 240 TTTGYL------DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 T G L +P A WPAD+HVIGKDI+RFHAIYWPAFL+SA LPLP+ VF H Sbjct: 339 TGAGGLAEKKAAGDPCLEAAGKWPADIHVIGKDIVRFHAIYWPAFLMSAGLPLPRSVFCH 398 Query: 294 GFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 GF+L G K+SK+LGNV+DP +++ G D+ RYF V++ + G D + + L N Sbjct: 399 GFVLDAAGTKMSKTLGNVLDPNALLDAHGSDSFRYFCVKDASPGADVKFSETSLILAHNN 458 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 +LA+ GNLV R+ + G +P P A Sbjct: 459 ELADAFGNLVHRATAFAQSKCGGKVPAPQA 488 >gi|297669110|ref|XP_002812749.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like isoform 1 [Pongo abelii] Length = 613 Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 188/511 (36%), Positives = 274/511 (53%), Gaps = 30/511 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAA 62 + Y +T I Y NA PHIGH Y ++AD L R RL G F+TGTDEHG KI +AA Sbjct: 64 RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 123 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ DQ S F+ + IS DFIRTTE RH + W + +G +YKG Sbjct: 124 ATAGLAPTELCDQVSEQFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKG 183 Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY DE + + +V + G G + +PV W +EE Y FRLS +++ L Sbjct: 184 VYEGWYCASDECFLPEAKVTQQPGPSGDSFPVSLESGHPVSWTKEENYIFRLSQFREPLQ 243 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235 + +P+ I P + V+ ++ L DLS+SR++ WGI +P D +YVW+DAL Sbjct: 244 RWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 303 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYLT GY P+ +WPA H+IGKDIL+FHAIYWPAFLL A + P++++ H Sbjct: 304 VNYLTVIGY---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSH 360 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 G+K+SKSLGNV+DP + VD RYFL+R+ D Y + + K +N++LA Sbjct: 361 WTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELA 420 Query: 356 NGIGNLVSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILSVCSRVLQEI 401 + +G L++R + + + Y T PG S D +++S + + +++ Sbjct: 421 DALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQV 480 Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458 ++ N I++AL V S V + + + PW+L +P A TVL+V +E +R Sbjct: 481 ADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVF 540 Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489 LLQ P LA+K+ L V+ R L Sbjct: 541 GTLLQPVTPSLADKLLSRLGVSASERSLGEL 571 >gi|258591914|emb|CBE68219.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) [NC10 bacterium 'Dutch sediment'] Length = 646 Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 185/483 (38%), Positives = 281/483 (58%), Gaps = 19/483 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFH--RLDGLDVLFTTGTDEHGQKIAKAA 62 + Y++T I Y NA PH+GHAY I+AD +ARF RL V F TGTDEHG KI +AA Sbjct: 4 QTFYLTTPIYYVNATPHLGHAYTTILADTMARFKKLRLGPEQVYFLTGTDEHGDKIVQAA 63 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G + + + D+ S F++ L ++ + FIRTT + H + ++I D GDIY G Sbjct: 64 AQGGESPQAYADRISGIFQETWKRLGLAPNQFIRTTSEPHKRAVQRFLQQIYDAGDIYFG 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y E +Y + E+ D + + Q P +++E+ YFFR+ YQ+ L+ + Sbjct: 124 EYGGHYCFGCERFYTEKEL---QDSKCPDHQTVPA-FIKEQNYFFRMGKYQEWLIDHIHR 179 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLT 240 H +FI P RNEV+SF+K L+DL +SR + +WGI +P D +Y+ YVW DAL NY++ Sbjct: 180 HADFIRPERFRNEVLSFLKEPLEDLCISRPSTRLEWGIPLPFDDRYVTYVWFDALINYIS 239 Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 LD PDG +FWP+ H+I KDIL+ HAIYWP L +A LP + + HG+ + Sbjct: 240 A---LDWPDGEAFRRFWPSAQHLIAKDILKPHAIYWPTMLKAAGLPPYRHLNVHGYWKIE 296 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS G+V+ P+++ ++ GVDA RYF++RE+ G D + +D L R+NADLAN +G Sbjct: 297 EAKMSKSRGSVVRPLDLADKYGVDAFRYFVLREMTFGLDAGFSEDALVARLNADLANDLG 356 Query: 360 NLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 NL SR + +I + Y G+I TPG D + + ++ M+ ALA + Sbjct: 357 NLYSRVLKLIQRYYGGIITHTPG-----DGDLAEAARVAVTDVMAAMERFAFSEALAAIW 411 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 +LVS ++Y +PW+ +P + +L E +R +A LL F+P+ A+++ L Sbjct: 412 NLVSATNKYLVHNEPWKRDPGDP-QTKAILVTAAETLRTIATLLLPFLPQTADRMLRGLG 470 Query: 479 VAD 481 + + Sbjct: 471 ITE 473 >gi|194246768|ref|YP_002004407.1| methionyl-tRNA synthetase [Candidatus Phytoplasma mali] gi|193807125|emb|CAP18563.1| Methiony-tRNA synthetase [Candidatus Phytoplasma mali] Length = 517 Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 190/491 (38%), Positives = 289/491 (58%), Gaps = 17/491 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 Y++TAIAY + PH+G+ YE+++AD LARF RL+G DV F TGTDEHGQKI + +++ Sbjct: 13 FYLATAIAYASDIPHVGNVYEVVLADFLARFKRLEGYDVYFQTGTDEHGQKIFQKSKSKN 72 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + +VD S+ R + D++++SYD FIRT+++ H + + + K+ K DIY G Y G Sbjct: 73 QKPQTYVDYFSQEIRRIYDLMNVSYDKFIRTSDENHKKSVQSVLDKLYQKKDIYLGKYEG 132 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 +YS+ +E+Y + ++ G + P+ W EE YFF+LS YQ KL + ++ Sbjct: 133 FYSVIEESYVLEKDLVNGLT----KSGEIPI-WNSEEVYFFKLSKYQKKLYDFLKNDSVL 187 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246 I P+ ++ E+++ +K L DL ++R +GI + + Q+ +YVW+DAL NY+T Y Sbjct: 188 IRPVNKKQEILNLLKEPLPDLCITRTFCKYGINLNFNSQHFVYVWVDALLNYITGLNY-- 245 Query: 247 NPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 +PD K+ K+WP D+H+IGKDI+RFH +++ L+S LPLPK F H FIL K Sbjct: 246 HPDLPKSKEFLKYWPCDIHIIGKDIIRFHLVHFLILLISLELPLPKIFFVHPFILFDKNK 305 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GNV+ ++++ VD +RYF++ EI +DG + L++R N DLAN IGNL+ Sbjct: 306 MSKSKGNVLYIDDLLKTFSVDTIRYFMLHEIPYNQDGNITHELLRERHNTDLANTIGNLL 365 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCS-RVLQEIRENMQNQLIHRALAQVISLV 421 +R++ M LK Y E E LS S L I++ + N I A+ +I L Sbjct: 366 NRTLGM-LKAYRNGHLKKVILPEILEIDLSKKSLEALPLIQKKVFNFHISDAIEVIIQLA 424 Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 ++Y D KPW L K + D VLY +E +R + +LLQ F+P A I + Sbjct: 425 RFSNKYIDLAKPWILFKESDKQDVLDHVLYSLIETLRFIGVLLQPFLPTTAKSILKQ--I 482 Query: 480 ADENRCFQSLD 490 EN F SL+ Sbjct: 483 KSENNTFASLE 493 >gi|218777886|ref|YP_002429204.1| methionyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01] gi|218759270|gb|ACL01736.1| Methionyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01] Length = 643 Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 199/516 (38%), Positives = 286/516 (55%), Gaps = 23/516 (4%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I Y NA+PH+GHAY I+AD R+H+L G D F TGTDEHG K+ +AA+ Sbjct: 5 FYITTPIYYVNARPHLGHAYTTIVADTAKRYHQLRGQDAYFLTGTDEHGDKVVEAAEKEN 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + +VD S FR++ L IS D FIRTT+ H + + +KI D GDIY Y G Sbjct: 65 KEVRDYVDMISGLFRNLWPELLISNDQFIRTTDADHIKVVQEVLQKIYDNGDIYFSEYEG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y E +Y + E+ DG+ + + P + ++E YFFR+S YQD L+ + + +P F Sbjct: 125 LYCFGCERFYLEREL---VDGKCPDHEVEPKK-IKESNYFFRMSKYQDWLIDHIKKNPGF 180 Query: 187 ILPIERRNEVISFVKSGLKDLSLSR-KT-FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 I P NEV+SF+K L+DL +SR KT WGI +P D Y+ YVW DAL NY + GY Sbjct: 181 IRPQRYANEVLSFLKEPLEDLCISRPKTRLTWGIDLPFDENYVTYVWFDALLNYASALGY 240 Query: 245 LDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 P+G K K+WP HV+ KDIL+ H IYWP + +A +P+ + HG+ K+ Sbjct: 241 ---PEGEKFQKYWPGVQHVVAKDILKPHGIYWPTMMKAAGIPVYNHLNVHGYWNVADSKM 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGNV++P+E+ ++ G++ RYFL+RE+ G D + ++ L R+N+DLAN +GNL S Sbjct: 298 SKSLGNVVEPLELSKKYGIEQFRYFLMREMTFGLDSSFSEEALVGRINSDLANDLGNLFS 357 Query: 364 RSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 R +SM K G +P P +SD + ++ M H+ LA V + Sbjct: 358 RVISMAHKFCKGTVPENHPDLAFDSDWKLSDAAMEAVEAYDLAMDEFQFHKGLAAVWEFI 417 Query: 422 SEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-- 477 S +++Y D PW L K A V+Y +E +R +A ++ +P A K+ L Sbjct: 418 SRMNKYVDFTSPWVLAKDKAAAAQLEAVMYNLLEGLRLVAGMVWPVLPNAAEKMVGHLGL 477 Query: 478 ----FVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 F+ D + LKPG L K +FPR Sbjct: 478 DKDAFLKDSAALGEW--GVLKPGTQLQKAVT-LFPR 510 >gi|315045362|ref|XP_003172056.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893] gi|311342442|gb|EFR01645.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893] Length = 592 Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 183/497 (36%), Positives = 269/497 (54%), Gaps = 22/497 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y NA PHIGH Y ++IAD+L R+ L G D TGTDEHG KI +AA G Sbjct: 56 YVTTPIFYVNAAPHIGHLYTILIADILKRWQVLIGNGDAKLLTGTDEHGMKIQQAALQNG 115 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + + D+N F+ +A + S+D FIRTT+ H + W+ ++ +G IY+G + G Sbjct: 116 LEPQALCDRNCETFKILAREANASHDHFIRTTDSAHKAAVQFFWENLNHRGYIYEGKHEG 175 Query: 127 WYSLRDEAYYNDDEVYKGAD---GQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSYY 180 WYS+ DE +Y V+ D G+ A V++ +E Y F+LSA+QD+LL +Y Sbjct: 176 WYSVSDETFYPASAVHSTLDPATGRKMMASIETGKEVKFSQETNYHFKLSAFQDRLLEHY 235 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238 +P F+ P + ++ V SGL+DLS+SR WGI +P D +YVW+DAL NY Sbjct: 236 HKNPNFVRPKVYMDSIVQNVASGLQDLSISRPVDRLSWGIPVPGDTTQTIYVWLDALVNY 295 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 +T GY P + WPAD+ V+GKDI RFH IYWPAFL++ +LPLP+ + +H Sbjct: 296 ITYAGYPFTPGREQESIWPADVQVVGKDITRFHCIYWPAFLMALDLPLPRTILTHAHWTM 355 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K+SKS GNV++P+ + GVD +R++L D YD + + L G+ Sbjct: 356 NHSKMSKSTGNVVNPMFAMARYGVDPMRFYLAMNGGLASDTDYDNSYIVRDYKNILQGGL 415 Query: 359 GNLVSR-------SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 GNL SR +V + G + A S+ +V + M Sbjct: 416 GNLCSRVMRGKGWNVRESVARMTGGQRSGNAKDPSEIEHKEFLEKVPALVSNQMDELNPR 475 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK---TNP---DRASTVLYVTVEVIRQLAILLQAF 465 RAL +V+ ++ + +RY + PW L K TNP DR V++ E +R ILLQ F Sbjct: 476 RALEEVVKIIDQTNRYVQSTGPWNLAKDAATNPIAHDRLVGVIFNATESLRIAGILLQPF 535 Query: 466 VPKLANKIFDILFVADE 482 +P+ A K+ D+L V ++ Sbjct: 536 MPEKAKKLLDMLGVEED 552 >gi|119500964|ref|XP_001267239.1| methionine-tRNA synthetase [Neosartorya fischeri NRRL 181] gi|119415404|gb|EAW25342.1| methionine-tRNA synthetase [Neosartorya fischeri NRRL 181] Length = 572 Score = 333 bits (854), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 182/474 (38%), Positives = 260/474 (54%), Gaps = 19/474 (4%) Query: 20 PHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSR 78 PH+GH Y M+I D+L R+ L G D TGTDEHG KI +AA AG+ + F D N + Sbjct: 66 PHVGHFYTMVITDILKRWRVLLGDKDAQLLTGTDEHGMKIQQAASAAGMDPQAFCDMNCK 125 Query: 79 NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138 F+ +A ++ YD FIRTT+ H + + W+ ++ +G IY + GWYS+ DE +Y Sbjct: 126 TFQALAKAANVDYDHFIRTTDPAHKEAVQYFWEMLNHRGYIYTAKHEGWYSVSDETFYPP 185 Query: 139 DEVYKGADGQYYNAQH------NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192 +V D + V+W E Y FRLSA+Q++LL Y+S EF+ P Sbjct: 186 TQVQNSLDPSTGRKRMVSVETGKEVEWSSETNYHFRLSAFQERLLELYKST-EFVTPGNY 244 Query: 193 RNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250 +++ V SGL DLS+SR + WGI +P D +YVW+DAL NYLT GY P Sbjct: 245 MADLVKSVSSGLSDLSISRPVERLTWGIPVPGDETQTIYVWLDALINYLTKAGYPFPPGQ 304 Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310 WPAD+HVIGKDI+RFH +YWPAFL++ +LPLP++V HG EK+SKS GNV Sbjct: 305 EGRLGWPADVHVIGKDIVRFHCVYWPAFLMALDLPLPRRVLIHGHWTINREKMSKSTGNV 364 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI- 369 ++P I+ GVD +R+FL + D YD + + L GIGNL R++ Sbjct: 365 VNPFFAIDRFGVDTMRFFLAFQGGLAGDADYDNSYIIRDYKKLLQWGIGNLTHRTIGCAK 424 Query: 370 --LKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 L+ Y D A T D S+ + + + E M+ AL ++ ++ + + Sbjct: 425 GNLRSYIADAAADKLPAPTPEDLEHQSLLEQTPERVAEQMEKLNPRAALQGIMVIIEKTN 484 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +YF A +PW+ P + VLY E +R ILLQ F+P +N++ DIL V Sbjct: 485 KYFHAAEPWK----TPAESQRVLYNVAESLRISGILLQPFMPSKSNELLDILRV 534 >gi|67624509|ref|XP_668537.1| methionine -- tRNA ligase [Cryptosporidium hominis TU502] gi|54659719|gb|EAL38284.1| methionine -- tRNA ligase [Cryptosporidium hominis] Length = 562 Score = 333 bits (853), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 184/519 (35%), Positives = 289/519 (55%), Gaps = 24/519 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y +TAI Y N PH+GHAYE++ +D+L R RL G + F TGTDEHGQKIA A+ G+ Sbjct: 17 YFTTAINYTNGTPHMGHAYEIVTSDILVRIARLFGFNTRFQTGTDEHGQKIAATAEKKGI 76 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + K D+N + F++M + L IS D FIRTT+ H+++C+ LW++ KGDIY G Y+GW Sbjct: 77 SPKELCDENVKQFKNMNEKLQISTDRFIRTTDTDHYESCKELWRRCEAKGDIYLGKYNGW 136 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHN--PVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 Y++R+E++ + E A Y + P+ MEE YFFR++ Y + + ++ +PE Sbjct: 137 YNVREESFMTELE----AKMLNYTDPISGLPLTKMEEPSYFFRITNYLESIKNHIIDNPE 192 Query: 186 FILPIERRNEVISFVK---SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 FI P R +++ ++ S +DLS+SR +F WG+ +P+D +++MYVW DALTNY+T Sbjct: 193 FIQPESSRESILARLEALGSNSEDLSISRASFSWGVPVPNDQEHVMYVWFDALTNYITGL 252 Query: 243 GYLD-----NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 + D + K+W +H++GKDI FH++ WPA LLS L LPK +F+HGF+ Sbjct: 253 KWADFDNDLEENSLFNKYWENTVHIVGKDITWFHSVIWPAMLLSVGLSLPKTIFAHGFVT 312 Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 G+K+SKSLGNV+DP E I+++G D RY+L RE G D Y + N +LA+ Sbjct: 313 APDGKKMSKSLGNVVDPFEQIDKMGSDPFRYYLAREGRFGNDIKYQPSSVLDYNNGELAD 372 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 GNL+SR ++ K G+ P+ D+ + +V +E I Sbjct: 373 TYGNLISRITNLTHKFCQGVAPSLSQSLLLDKPV--DIDKVFEEYYLAWHCFRIDECTQI 430 Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + L V+++ PW D ++ + +E ++ILL F+ ++F+ Sbjct: 431 AMDLSRNVNKFLTDHAPWNKDNGKSDEERIEIIRIVLEGSYYISILLSPFITLACKEVFN 490 Query: 476 ILFVADENRCFQSLD---QRLKPGFMLHKTFDPIFPRFL 511 L + + +D +KPG + +P+F R + Sbjct: 491 RLGTPE--KIIPEVDINYNNIKPGTPIL-IGEPLFKRIV 526 >gi|297153868|gb|ADI03580.1| methionyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1] Length = 507 Score = 332 bits (852), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 182/482 (37%), Positives = 272/482 (56%), Gaps = 21/482 (4%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + YI+T I Y NA+PH+G A E++ AD LAR HR G V +GTD++ K AA+ A Sbjct: 5 RRYITTTIPYVNARPHLGFALELVQADTLARHHRRRGEQVRLLSGTDDNSLKNVLAAEAA 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDIYKGCY 124 G + FVD+N+ F + L +S+DDFIRT+ + RH LW++ + GD+Y+ Y Sbjct: 65 GTDVQSFVDRNADAFAALRGPLALSFDDFIRTSSDPRHRVGVERLWRRCAASGDLYRREY 124 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + E +Y DE+ G G++ Q + EE +FFRLS Y +L S Sbjct: 125 EGLYCVGCEQFYTPDELVDGRCGEHGTEP----QLVTEENWFFRLSRYAGRLHQLISSGD 180 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 I P+ RRNEV++ V+ GL D S+SR + WGI +P+DP ++YVW DAL NY+T+ Sbjct: 181 LRIEPVARRNEVLALVEGGLHDFSVSRSHSRARGWGIPVPEDPSQVVYVWWDALGNYVTS 240 Query: 242 TGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 GY + D + ++W +H++GK ++RFHA+YWPA LLSA LPLP + H ++ Sbjct: 241 LGYGTD-DTAYDQWWATSERRVHLVGKGVVRFHAVYWPAMLLSAGLPLPTDILVHDYLTV 299 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 G KISKS G +DP + G DA+R++L+R++ D + D L R +AD A G+ Sbjct: 300 DGRKISKSAGTTVDPAALAAAHGTDAVRWWLLRDVPRIGDADFTPDRLTGRADADFAGGL 359 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNL+ R V+M+ + G +P + S +++ VC +V + + + RA+ V Sbjct: 360 GNLIHRIVTMVHRFRGGTVPV--SAPSSGLALVDVCRKVPGLVDAALADFDFRRAIRAVW 417 Query: 419 SLVSEVDRYFDAQKPWELKKTN-------PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 ++V E +R DA +PWEL + R TVL V R LA L++F+P A Sbjct: 418 NIVEEANRCIDATRPWELARAERQGDGEAAKRLDTVLVTLVTACRVLADELRSFIPDAAT 477 Query: 472 KI 473 +I Sbjct: 478 RI 479 >gi|298529104|ref|ZP_07016507.1| methionyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] gi|298510540|gb|EFI34443.1| methionyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] Length = 640 Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 182/516 (35%), Positives = 290/516 (56%), Gaps = 21/516 (4%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E ++ST I Y NA+PH+GHAY I+AD + R HRL D F TGTDEHG KI +AA+ Sbjct: 2 ESFFVSTPIYYVNARPHLGHAYTTIVADSINRLHRLRQKDTFFLTGTDEHGDKIVEAAEK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ K + D+ S F++ L++ FIRTT+ H + + + GDIY G Y Sbjct: 62 NGLAPKEYADRISALFKEAWPWLEVENSAFIRTTDPEHVKCVQRFLNTVYENGDIYFGEY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y E +Y + E+ DG + P ++++EE YFFR++ Y L + +HP Sbjct: 122 GGHYCFGCECFYMEKEL---QDGLCPDHLEKP-RYLKEENYFFRMTRYLPALREHILNHP 177 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 EFI P RNEV+ + L DL +SR WGI++P D ++ YVW DAL NY++ Sbjct: 178 EFIQPERYRNEVLGMLGDELTDLCISRPKSRLTWGIELPFDSNFVTYVWFDALINYISAL 237 Query: 243 GYLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 G+ P G K +WP H++ KDIL+ HA++WP L+SA + L + + HG+ + Sbjct: 238 GW---PHGEAFKRYWPGAYHLVAKDILKPHAVFWPTMLMSAGVDLYQGLRVHGYWTVQEA 294 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+ P++++++ G+ RYFL+RE+ G D + ++ L R+N+DLAN +GNL Sbjct: 295 KMSKSLGNVVQPMDMVDKYGLAPFRYFLLREMQFGLDASFSEEALVNRLNSDLANDLGNL 354 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 SR+++M K + G++P ++ D+ ++ L E + + L+ + + + Sbjct: 355 CSRTLAMTNKYFQGLVPEKSGLSQEDQEVVDAGLTALDEYVRLFGDFQFSKGLSVLWAFI 414 Query: 422 SEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +++Y DA PW L K+ +R V+YV +E +R++A+ L +P + ++ L Sbjct: 415 GRLNKYVDASAPWVLYKEGQTERLQNVMYVLLEGLRKIALHLWPVMPSSSEELLSQLGTG 474 Query: 481 -DENRCFQSLDQR------LKPGFMLHKTFDPIFPR 509 D ++ L+Q LKPG + K + +FPR Sbjct: 475 FDLHKV--DLEQEAGHWSGLKPGVRVAKKSN-LFPR 507 >gi|42560572|ref|NP_975023.1| methionyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492068|emb|CAE76665.1| Methionine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320800|gb|ADK69443.1| methionine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 509 Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 177/478 (37%), Positives = 281/478 (58%), Gaps = 14/478 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I YP+ H+GHAY +AD+L R+ + G + F TG+DEHGQKI A+ Sbjct: 3 KKFYITTPIYYPSGNLHLGHAYTTTLADILNRYKKEQGYETFFLTGSDEHGQKIENKAKE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 A +T +++ + F+D+ L+I YD FIRTT+ H T + ++ + +KG IYKG Y Sbjct: 63 ANLTPLEYLNPKVQAFKDLWTKLNIDYDKFIRTTDDYHEKTVQKIFTILLEKGYIYKGQY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + E + ++++ + + N + Q + E YF ++S +Q+ + + +S Sbjct: 123 EGIYCVSCEEFLTNEQIDENGLCKISNTKP---QLVNENTYFLKVSQFQEFVQNILKS-- 177 Query: 185 EFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 EF++P RRNE++ +FV+ GLKDLS++R F WGI I D ++I+YVW+DAL+NY+T G Sbjct: 178 EFLIPEYRRNEMLKNFVEPGLKDLSITRVNFKWGIPITQDQKHIIYVWLDALSNYITALG 237 Query: 244 YLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 YL D KFW D L + GK+I+RFH+IYWP L + NL P + HG+IL+K Sbjct: 238 YLQEDDSLFKKFWQNDDCEILQLAGKEIIRFHSIYWPVMLETLNLKQPTHLLGHGWILNK 297 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKSLGN+IDP+++IE DALR+++ ++ KDG + + + NA LAN +G Sbjct: 298 NTKMSKSLGNIIDPVKIIELYSADALRFYIANDLPTEKDGNFSLELFIESFNAHLANNVG 357 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL+SR+ +MI K ++G I + D+ ++ + + + NM I A+ V+ Sbjct: 358 NLISRTHNMISKYFNGYIDLNN--IKYDQELIDLGIKTIDNYIFNMDQYKISEAIKVVLE 415 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L + ++Y + + PW L+K N R + V + R +AI+ P L N D++ Sbjct: 416 LSNACNKYIEIKTPWNLEKEN--RIEELKTVLATLQRNIAIISYLLKPVLVNSYTDMI 471 >gi|145346883|ref|XP_001417911.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578139|gb|ABO96204.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 591 Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 191/521 (36%), Positives = 295/521 (56%), Gaps = 28/521 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++T I Y N QPHIGH Y +AD AR+ R G DV F TGTDEHG K+ ++A+ G+ Sbjct: 67 FVTTPIYYVNDQPHIGHVYTSTVADAYARYRRARGEDVFFLTGTDEHGLKVEQSAEKRGI 126 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + D+NS+ FRD+ DIS+D+FIRTT+ H R L K + +K +Y G + GW Sbjct: 127 EPQALADENSQKFRDVMTAYDISFDEFIRTTDDYHERQVRALVKVLQEKDAVYLGRFEGW 186 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E YY + + K D + + + V+ EE Y+FRLS +Q +L + + +P+F+ Sbjct: 187 YDEGQEEYYTESKA-KELDYKSPISGKDMVR-SSEENYYFRLSKFQKELEALHADNPDFL 244 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 P RRNE+I + GL D+ +SR F WGI +PDD ++++YVWIDAL NY+T G D Sbjct: 245 TPSARRNEMIGRLNEGLNDVPISRTNFKWGIPMPDDEKHVIYVWIDALMNYITAIGLGDG 304 Query: 248 PD----GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 D ++K+WPA +H++ K+I FH++ WPA L++ +LPLP++V +H F + +G K+ Sbjct: 305 KDSIVYADRSKYWPASMHIMAKEISWFHSVIWPALLMALDLPLPQRVHAHAFWIREGRKM 364 Query: 304 SKSLGNVIDPI---EVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIG 359 SKSLGN +D E G+DA+RY+L E G +D + + +++ ++DL N +G Sbjct: 365 SKSLGNFVDLACMDRFKEHYGLDAMRYYLAVEGPIGAQDANFSAERVQEIYSSDLVNTMG 424 Query: 360 NLVSRSVSMILKDYDGMIPTPGA----FTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N VSR+ +MI K +DG + + A T + + S +Q+ + RA A Sbjct: 425 NSVSRTTAMINKYFDGEVRSEEANGARVTFDNWDWPARTSAHVQDALTAYDKLDLPRAAA 484 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++V +VD + +P+ + K A + LY +E +R A+LL+ +P NK+ Sbjct: 485 AAKNIVMDVDLFITETEPFRMAKDESKSAELAACLYQCLEALRIAAVLLEPLMP---NKM 541 Query: 474 FDILFVADENRCFQSLDQR-----LKPGFMLHKTFDPIFPR 509 + F A S+ QR LKPG + K +FPR Sbjct: 542 AE--FDAGVGLGEGSIAQRTKWGGLKPGTKVEKL--ALFPR 578 >gi|33240420|ref|NP_875362.1| methionyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237947|gb|AAQ00015.1| Methionyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 507 Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 192/514 (37%), Positives = 281/514 (54%), Gaps = 20/514 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + I+T + Y N +PH+G Y I D AR+ +L+G +V+F TG DEHGQKI + A+ Sbjct: 3 ITITTPLYYVNDKPHLGSTYTTIACDAFARYKKLNGNNVVFITGVDEHGQKIERTAKANN 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 ++ + + + + IS D FIRTT +H + ++ GDI G G Sbjct: 63 ISPSDHCSKIASQYEMLWKKWSISNDKFIRTTSSQHKTLVEKFFHRVDQNGDIRLGRQQG 122 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 WY + E Y +D GA + P++W +EE FF LS YQ K+ + S P F Sbjct: 123 WYCVGCEEYKDDP---PGAKDPICSTHKMPLEWRDEENLFFCLSKYQTKIENLI-SQPNF 178 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT---TTG 243 + PI RRNE+I+FV GLKD S+SR WGI +P + YVW DAL YL+ T G Sbjct: 179 VQPISRRNEIINFVSKGLKDFSISRVNISWGIPVPGFKGHTFYVWFDALLGYLSGLQTKG 238 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 ++ D WPAD+HVIGKDILRFHA+YWPA L+SA L LP +VF HGF+ +G K+ Sbjct: 239 EVE-LDELNNYGWPADVHVIGKDILRFHAVYWPAMLMSAGLDLPHRVFGHGFLTREGNKM 297 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 KSLGNV+DP ++++ G D +R++L+ +I G+DG + + N DLAN IGNL++ Sbjct: 298 GKSLGNVLDPELLLDKYGEDPVRWYLLSDIKFGQDGDFQEKRFIDLTNNDLANTIGNLLN 357 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+ SM K + +P E++E L + S+ + ++ + A ++ L S Sbjct: 358 RTSSMSRKWFSNCVPNIHKENENNELKL-LASKTISDVINYYEQLSFKEACKAILDLASS 416 Query: 424 VDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 + Y + +PW+L K N +R S LY +E R +A L+ +P L+ KI + L D Sbjct: 417 SNLYLNDNEPWKLIKQNSERELVSYHLYNVLESCRIVATLIAPVLPNLSRKILNQLGFFD 476 Query: 482 ENRCFQSLDQRLKPGFMLHKTFD-----PIFPRF 510 QS + +L G +L K + PI PR Sbjct: 477 S---LQSWEHQLVWG-VLEKGQELPEPSPIIPRL 506 >gi|260435477|ref|ZP_05789447.1| methionyl-tRNA synthetase [Synechococcus sp. WH 8109] gi|260413351|gb|EEX06647.1| methionyl-tRNA synthetase [Synechococcus sp. WH 8109] Length = 514 Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 174/454 (38%), Positives = 254/454 (55%), Gaps = 11/454 (2%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y N +PH+G Y + D LARF RL V F TG DEHGQKI + A+ ++ Sbjct: 5 LTTPLYYVNDRPHLGSTYTTLACDALARFERLQLEKVTFVTGVDEHGQKIQRTAERQQLS 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D+ S +RD+ + IS D F+RTT RH + ++++ GDI G +GWY Sbjct: 65 PQDHCDKVSTRYRDLWNQWGISNDRFVRTTNPRHLELVEQFYERVKASGDIVVGKQTGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E Y +D A+ + P++W +EE FFRLS YQ + S +FI Sbjct: 125 CVDCEEYKDDP---AEAESPSCSIHRKPLEWRDEENLFFRLSRYQSAIEELV-SRDDFIA 180 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT---GYL 245 P RR EV +FV GL+D S+SR WG+ +PD P + YVW DAL YLT G Sbjct: 181 PASRRQEVRNFVAQGLRDFSISRVNVSWGLPVPDHPGHTFYVWFDALLGYLTALLDDGES 240 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + D + WPA +HVIGKDILRFHA++WPA +SA LP+P+KVF HGF+ +G+K+ K Sbjct: 241 VSLDRLASCGWPASVHVIGKDILRFHAVFWPAMCMSAGLPVPQKVFGHGFLTREGQKMGK 300 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGNV+DP ++E G DA+R++L+R+I G DG + + VN DLAN IGNL++R+ Sbjct: 301 SLGNVLDPELLLERCGSDAVRWYLLRDIQFGDDGDFQQQRFLDLVNNDLANTIGNLLNRT 360 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 SM K +D ++P GA + +D + + + + E M A ++ L + Sbjct: 361 SSMARKWFDDVVPPAGAASSADHPLALKAAETVSTVIEAMPQLAFKTAAESILQLAIAAN 420 Query: 426 RYFDAQKPWELKKTNPDRASTV---LYVTVEVIR 456 + + PW K P + +V L+ +E R Sbjct: 421 GHLNETAPWSRMK-EPGQEQSVAEDLFAVLETTR 453 >gi|83769155|dbj|BAE59292.1| unnamed protein product [Aspergillus oryzae] Length = 590 Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 187/511 (36%), Positives = 275/511 (53%), Gaps = 42/511 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQK--- 57 + ++ Y++T I Y NA PH+GH Y MIIAD+L R+ L G D TGTDEHG K Sbjct: 51 EHKKPYYVTTPIFYVNAAPHVGHLYTMIIADILKRWRTLCGETDAQLLTGTDEHGMKGYS 110 Query: 58 -------------IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104 I +AA A + T+ F D N + F D+A ++ Y+ FIRTTE H Sbjct: 111 QSKNFHGIDCTVQIQQAALAAEMDTQAFCDMNYKTFEDLAKAANMDYNYFIRTTEAAHKK 170 Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-----GQYYNAQHNP-VQ 158 + + W+ + +G IY + GWYS+ DE +Y +V+ D + +A+ V+ Sbjct: 171 SVQYFWEMLDHRGYIYTSKHEGWYSVSDETFYPPSQVHNSLDPTTGRKRMVSAETGKEVE 230 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDW 216 W E Y FRLSA+Q++LL Y++ FI P E++ V SGL+DLS+SR + W Sbjct: 231 WSSETNYHFRLSAFQERLLDLYKT--GFITPSNYTTEIVKSVSSGLQDLSISRPVERLTW 288 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276 GI +P D +YVW+DAL NYLT GY P WPAD+HV+GKDI+RFH +YWP Sbjct: 289 GIPVPGDDTQTIYVWLDALVNYLTKAGYPFPPGQEGGLGWPADVHVVGKDIVRFHCVYWP 348 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 AFL++ +LPLP+ V HG EK+SKS GNV++P ++ GVD +R+FL + Sbjct: 349 AFLMALDLPLPRNVLVHGHWTINHEKMSKSTGNVVNPFFSLDRFGVDTMRFFLAYQGGLA 408 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDE 388 D YD + + L +GIGNLV R++ S I+ G +P A E D Sbjct: 409 GDADYDNSYIIRDYKKLLQSGIGNLVLRTIGSSKGKLHSYIVSGTSGELP---AANEQDL 465 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 + ++ E M++ AL ++ L+ + ++Y +PW+ + +A VL Sbjct: 466 QFEQLLRETPVKVGEQMESLNPRAALQNIMVLIEQGNKYIHLSEPWK----DAIKAQRVL 521 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + E +R ILLQ F+P + ++ D+L V Sbjct: 522 FNVAESLRIAGILLQPFMPTKSKELLDVLRV 552 >gi|328855021|gb|EGG04150.1| hypothetical protein MELLADRAFT_89644 [Melampsora larici-populina 98AG31] Length = 482 Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 183/457 (40%), Positives = 263/457 (57%), Gaps = 20/457 (4%) Query: 49 TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108 TGTDEHG KI +AA T D S FR++A +I Y DFIRTTE RHH + Sbjct: 3 TGTDEHGIKIERAAIKNHQTPAELCDSVSIRFRELAKAGNIGYGDFIRTTESRHHLAVQT 62 Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFF 167 W ++ + G IYKG YSGWYS+ DE YY ++V G+ + + V +W+EEE Y F Sbjct: 63 FWNRLMENGHIYKGSYSGWYSVSDETYYAPNQVQSRNPGEMVSFETGQVVEWIEEENYMF 122 Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQ 225 +LS +Q +L+ + +P ++ ++ + + L DLS+SR T WGI++P+DP Sbjct: 123 KLSDFQSRLIEWLTQNPTALVSSQKADIINQLQSKELPDLSISRPTDRLKWGIRVPNDPN 182 Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285 I+YVWIDALTNYLT TGY D K + WP ++HVIGKDI RFHAIYWPA L+ A L Sbjct: 183 QIIYVWIDALTNYLTVTGYPWASDQIKNEKWPPNVHVIGKDITRFHAIYWPAMLMGAGLE 242 Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345 LPK + +H K EKISKS GNV+DP+E ++E GVD LRY+L +A + D D Sbjct: 243 LPKSIIAHAHWTMKDEKISKSRGNVVDPVESLKEWGVDGLRYYL---MAAPGSLWNDTDW 299 Query: 346 LKKRVN----ADLANGIGNLVSR--------SVSMILKDYDGMIPTPGAFT-ESDESILS 392 RV+ DLA +GNL+SR + LK G+ P +F E +++ Sbjct: 300 APDRVDEHYRKDLAGQLGNLLSRISNPKLWSRFPVGLKSGTGLFYPPQSFKLERSQALAD 359 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + S++ E+ +M + I +AL + +++E +R PW T + + +Y+ Sbjct: 360 LISKLPDEVDRSMSSFEIPKALKSIFQVLTESNRLISEIAPWH-SSTGSEESHESIYLCA 418 Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489 E IR AILLQ F+P+ +N+I + L ++ +NR + L Sbjct: 419 ESIRFSAILLQPFMPEKSNEILNQLGISVKNRGWTDL 455 >gi|303273506|ref|XP_003056114.1| predicted protein [Micromonas pusilla CCMP1545] gi|226462198|gb|EEH59490.1| predicted protein [Micromonas pusilla CCMP1545] Length = 600 Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 197/548 (35%), Positives = 298/548 (54%), Gaps = 64/548 (11%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 EK +++T I Y N QPHIGH Y IAD ARF R G DV F TGTDEHG K+ ++AQ Sbjct: 61 EKCFVTTPIYYVNDQPHIGHVYTSTIADAYARFQRSRGRDVFFLTGTDEHGLKVEQSAQK 120 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + D+NS FR + D + I++D FIRTTE H + K+ +KGD+Y G + Sbjct: 121 RGISPQELADENSATFRQVLDDMGITFDGFIRTTEPYHKSQVQHFVDKLREKGDVYLGKF 180 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME-----EEGYFFRLSAYQDKLLSY 179 GWY E YY + K + Y +PV + EE Y+F+LSAYQ +L Sbjct: 181 EGWYDEGQEEYYTET---KAKELDY----KSPVSGKDMARSSEENYYFKLSAYQRQLEKL 233 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 +E P+F+ P RRNE++S + GL D+ +SR F WGI +P+D +I+YVWIDAL NY+ Sbjct: 234 HEECPDFLSPPARRNEILSRLSQGLNDVPISRTNFKWGIAMPNDDNHIIYVWIDALLNYI 293 Query: 240 TTTGYLDNPD--------------GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285 T G + P G +WPA LH++ K+I FHA+ WPA L++ +P Sbjct: 294 TALGLAEEPSQPAASAGVATRRLKGELKDYWPASLHIMAKEISWFHAVIWPALLMALEMP 353 Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEV---IEEVGVDALRYF-LVREIACGKDGFY 341 LP++V +HGF + G+K+SKSLGN +D + + G+D+ RYF LV +D + Sbjct: 354 LPERVHAHGFWIRDGKKMSKSLGNFVDLKTITRYTDHYGLDSFRYFLLVDGPIAAQDANF 413 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE- 400 +++ N DL N +GN +SR+ +M+ K Y+G+IPT ++ I + + Sbjct: 414 ASSRVQEVYNTDLVNTLGNSLSRTTAMVNKYYNGIIPT-------EQQIQGIRITFGKRY 466 Query: 401 ----IRENMQNQLIHRALA--------QVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446 + NQ++H A ++LV++VD + + +P+ L K T + Sbjct: 467 DWPVVTAEAANQVMHAVEALEFPKAATAAVALVAKVDHFINELEPFRLAKDETKAEELGA 526 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK-----PGFMLHK 501 VLY +EV+R +LL+ F+P ++ + L + +LD+R+K PG + K Sbjct: 527 VLYQCLEVLRIACVLLEPFLPNKMREVSENLDLG-----HGTLDERVKWGLLQPGSTVKK 581 Query: 502 TFDPIFPR 509 +FPR Sbjct: 582 M--TLFPR 587 >gi|328783339|ref|XP_001120625.2| PREDICTED: methionyl-tRNA synthetase, mitochondrial [Apis mellifera] Length = 645 Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 178/500 (35%), Positives = 287/500 (57%), Gaps = 23/500 (4%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + +YI+T I Y NA PHIGH Y ++AD +ARF+ + G V +TGTDEHG K+ KAA Sbjct: 122 KNIYITTPIFYVNAGPHIGHLYTAVLADTIARFNAMLGHSVFLSTGTDEHGTKVQKAANK 181 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 A ++T + Q S F++M D+ + Y FIRTTE++H + W + G IY+G Y Sbjct: 182 AILSTFEYCTQISHQFQEMCDIFQVKYSKFIRTTEEQHQNAVLHFWNCLEKNGHIYRGKY 241 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDKLLS 178 SGWY++ +E + +D E+ + + ++WMEE+ Y FRL++++D+ L Sbjct: 242 SGWYNISEETFISDKEIIEKNFKNIKIKKGCIIESGDTIEWMEEDSYKFRLTSFKDQ-LK 300 Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALT 236 Y+ + I P R +I +++ L+DLS+SR W I P D + +YVW+DAL Sbjct: 301 YWLKNENVIEPAIYRKILIPWLEE-LQDLSISRPISRVPWAIPTPSDKSHTIYVWLDALV 359 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NYLT+ GY P+ S +FWP + +IGKDIL+FH IYWPAFL++A L PKK+ HG Sbjct: 360 NYLTSVGY---PNNSFKEFWPPTVQIIGKDILKFHGIYWPAFLMAAGLEPPKKLICHGHW 416 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 K +K+SKS GNVI P + + D LRYFL+R+ D Y+K ++K +N++LA+ Sbjct: 417 AVKDKKMSKSKGNVISPFIAMNDFTQDGLRYFLLRQAILDTDANYNKSKVRKILNSELAD 476 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV-----CSRVLQEIRENMQNQLIH 411 +GNLV+R + + DG+I + S L+V + +E R+ + ++ Sbjct: 477 TLGNLVNRCFGKTI-NPDGIIYNSIEYKSILNSELAVKNIKILENLSEEARKCYEKSDLY 535 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVP 467 + V+ ++ ++ F +PW L K+ + + V+ + +E +R A++L +P Sbjct: 536 HVVDHVMDMLRSANQVFAYYEPWNLSKSKDLNSEKQVEAVISLILENLRVAALVLYPIIP 595 Query: 468 KLANKIFDILFVADENRCFQ 487 +L++ + D L V+ +NR ++ Sbjct: 596 QLSSNLLDFLQVSIKNRNWE 615 >gi|159465763|ref|XP_001691092.1| predicted protein [Chlamydomonas reinhardtii] gi|158279778|gb|EDP05538.1| predicted protein [Chlamydomonas reinhardtii] Length = 526 Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 187/480 (38%), Positives = 274/480 (57%), Gaps = 11/480 (2%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+T + Y NA PH+G AY I ADV +RF RL G V F TGTDEHG+KIA AA+ G+T Sbjct: 3 ITTPLYYVNAAPHMGSAYPTIAADVASRFQRLLGKRVRFLTGTDEHGEKIAAAAEKRGMT 62 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D + D+ LDI +D F+RTTE RH + + ++GDIY Y GWY Sbjct: 63 PQAHCDDIVAQYTDLWGKLDIRFDRFVRTTESRHAALVVDVLGRCWERGDIYAADYEGWY 122 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + ++ E+ A + P Q +E YFFRLS Y K + S +F+ Sbjct: 123 CVDCEEFKDEKEM---AQPRGCPTHRKPCQHRKEANYFFRLSKYS-KEIEELLSRDDFVQ 178 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P RRNE++S+V+ GL+D S+SR DWGI++P DP++ +YVW DAL YL+ D Sbjct: 179 PASRRNELMSYVREGLRDFSISRAAVDWGIRVPQDPKHTVYVWFDALIGYLSGLLPEDVA 238 Query: 249 DGSKA---KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + A WPA +HVIGKDILRFHAIYWP LLSA LP+P+KV+ HGF+ G K+ K Sbjct: 239 PATSAVPAHGWPASVHVIGKDILRFHAIYWPGMLLSAGLPVPQKVYGHGFLTKDGLKMGK 298 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 +LGN +DP ++ G DA+R + ++EI G+DG + + + VNA LAN +GN ++R+ Sbjct: 299 ALGNTLDPQALVSTYGSDAVRLYFMKEIIFGQDGDFSEGRFRDVVNAALANNLGNGLNRT 358 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 ++++ K +D +P A +D + + + L + H A V++L S + Sbjct: 359 LNLLAKFHDSAVPLDSASLPADLPLRQLAAEKLPAAAAAYGSLSFHEAAEAVLALASRSN 418 Query: 426 RYFDAQKPWELKKTNPDR----ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 +Y + +PW K D A+ VL +E +R +A+ L P L+ +I+ L +D Sbjct: 419 QYLEETQPWTKLKKGTDEEKAEAAAVLVAVLEAVRCVAVGLAPLTPGLSRRIYAQLGYSD 478 >gi|66360370|ref|XP_627239.1| methionyl-tRNA synthetase of possible bacterial origin [Cryptosporidium parvum Iowa II] gi|46228842|gb|EAK89712.1| methionyl-tRNA synthetase of possible bacterial origin [Cryptosporidium parvum Iowa II] Length = 581 Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 176/482 (36%), Positives = 274/482 (56%), Gaps = 18/482 (3%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y +TAI Y N PH+GHAYE++ +D+L R RL G + F TGTDEHGQKIA A+ G+ Sbjct: 36 YFTTAINYTNGTPHMGHAYEIVTSDILVRIARLFGFNTRFQTGTDEHGQKIAATAEKKGI 95 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + K D+N + F++M + L IS D FIRTT+ H+++C+ LW++ KGDIY G Y+GW Sbjct: 96 SPKELCDENVKQFKNMNEKLQISTDRFIRTTDADHYESCKELWRRCEAKGDIYLGKYNGW 155 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHN--PVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 Y++R+E++ + E A Y + P+ MEE YFFR++ Y + + ++ +PE Sbjct: 156 YNVREESFMTELE----AKMLNYTDPISGLPLTKMEEPSYFFRITNYLESIKNHIIDNPE 211 Query: 186 FILPIERRNEVISFVK---SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 FI P R +++ ++ S +DLS+SR +F WG+ +P+D +++MYVW DALTNY+T Sbjct: 212 FIQPESSRESILARLEALGSDSEDLSISRASFSWGVPVPNDQEHVMYVWFDALTNYITGL 271 Query: 243 GYLD-----NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 + D + K+W +H++GKDI FH++ WPA LLS L LPK +F+HGF+ Sbjct: 272 KWADFDNDLEENSLFNKYWENTVHIVGKDITWFHSVIWPAMLLSVGLSLPKTIFAHGFVT 331 Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 G+K+SKSLGNV+DP E I+++G D RY+L RE G D Y + N +LA+ Sbjct: 332 APDGKKMSKSLGNVVDPFEQIDKIGSDPFRYYLAREGRFGNDIKYQPSSVIDYNNGELAD 391 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 GNL+SR ++ K G+ P+ D+ + V +E I + Sbjct: 392 TYGNLISRITNLTHKFCQGVAPSLSQSLLLDKPV--DIDTVFEEYYLAWNCFRIDECIQI 449 Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + L ++++ PW D ++ + +E ++ILL F+ ++F+ Sbjct: 450 AMDLSRNINKFLTDHAPWNKDNGKSDEERIEIIRIVLEGSYYISILLSPFITLACKEVFN 509 Query: 476 IL 477 L Sbjct: 510 RL 511 >gi|114582400|ref|XP_516010.2| PREDICTED: methionine-tRNA synthetase 2 [Pan troglodytes] Length = 593 Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 187/511 (36%), Positives = 273/511 (53%), Gaps = 30/511 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAA 62 + Y +T I Y NA PHIGH Y ++AD L R RL G F+TGTDEHG KI +AA Sbjct: 44 RTYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 103 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ D+ S F+ + IS DFIRTTE RH + W + +G +YKG Sbjct: 104 ATAGLAPTELCDRVSEQFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKG 163 Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY DE + + +V + G G + +PV W +EE Y FRLS ++ L Sbjct: 164 VYEGWYCASDECFLPEAKVTQQPGPSGDSFPVSLESGHPVSWTKEENYIFRLSQFRKPLQ 223 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235 + +P+ I P + V+ ++ L DLS+SR++ WGI +P D +YVW+DAL Sbjct: 224 RWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 283 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYLT GY P+ +WPA H+IGKDIL+FHAIYWPAFLL A + P++++ H Sbjct: 284 VNYLTVIGY---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSH 340 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 G+K+SKSLGNV+DP + VD RYFL+R+ D Y + + K +N++LA Sbjct: 341 WTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELA 400 Query: 356 NGIGNLVSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILSVCSRVLQEI 401 + +G L++R + + + Y T PG S D +++S + + +++ Sbjct: 401 DALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQV 460 Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458 ++ N I++AL V S V + + + PW+L +P A TVL+V +E +R Sbjct: 461 ADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVF 520 Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489 LLQ P LA+K+ L V+ R L Sbjct: 521 GTLLQPVTPSLADKLLSRLGVSASERSLGEL 551 >gi|297264625|ref|XP_001086799.2| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like isoform 1 [Macaca mulatta] Length = 593 Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 186/504 (36%), Positives = 275/504 (54%), Gaps = 30/504 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAAQN 64 Y +T I Y NA PHIGH Y ++AD L+R RL G F+TGTDEHG KI +AA Sbjct: 46 YFTTPIFYVNAAPHIGHLYSALLADALSRHRRLRGPSTAATRFSTGTDEHGLKIQQAAAT 105 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG+ D+ S++F+ + IS DFIRTTE RH + W + +G +YKG Y Sbjct: 106 AGLAPTELCDRVSKHFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKGVY 165 Query: 125 SGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSY 179 GWY DE + + +V + G G + +PV W +EE Y FRLS +++ L + Sbjct: 166 EGWYCASDECFLPEAKVTRQLGPLGDSFPVSLESGHPVSWTKEENYIFRLSQFREPLQRW 225 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237 +P+ I P + V+ ++ L DLS+SR++ WGI +P D +YVW+DAL N Sbjct: 226 LRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDALVN 285 Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 YLT GY P+ +WPA H+IGKDIL+FHAIYWPAFLL A + P++++ H Sbjct: 286 YLTVIGY---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSHWT 342 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 G+K+SKSLGNV+DP + VD RYFL+R+ D Y + + K +N++LA+ Sbjct: 343 VCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELADA 402 Query: 358 IGNLVSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILSVCSRVLQEIRE 403 +G L++R + + + Y T PG S D +++S + + +++ + Sbjct: 403 LGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSSVATLPKQVAD 462 Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAI 460 + N I++AL V S V + + + PW+L +P A TVL+V +E +R Sbjct: 463 HYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVFGT 522 Query: 461 LLQAFVPKLANKIFDILFVADENR 484 LLQ P LA+K+ L V+ R Sbjct: 523 LLQPVTPSLADKLLSRLGVSASER 546 >gi|307186752|gb|EFN72197.1| Methionyl-tRNA synthetase, mitochondrial [Camponotus floridanus] Length = 540 Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 186/498 (37%), Positives = 277/498 (55%), Gaps = 24/498 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y NA PHIGH Y ++AD +AR++ + G FTTGTDEHG KI AA AG+ Sbjct: 16 YITTPIFYVNAGPHIGHLYSAVLADAVARYNTMLGHKTFFTTGTDEHGNKIKVAAVAAGL 75 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + S+ F++M D ++ Y FIRTTEK+H+D WK++ ++G IY G YSGW Sbjct: 76 PNLEYCTNISQQFKEMCDRFEVDYSRFIRTTEKQHYDAVHHFWKRLEERGHIYLGKYSGW 135 Query: 128 YSLRDEAYYNDDEVYKGADGQ----YYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y + DEA+ +D E+ + D +AQ N V+W EEE Y FRLSA+QD L + + Sbjct: 136 YCVSDEAFLSDTELVEQRDPTGKIIKVSAQSGNTVEWTEEENYKFRLSAFQDDLKHWLKD 195 Query: 183 HPEFILPIERRNEVISFVKSG--LKDLSLS--RKTFDWGIKIPDDPQYIMYVWIDALTNY 238 I P + +++ G L+DLS++ R W + P D + +YVW+DAL NY Sbjct: 196 E-NTIKPALYHKMLSEWIEEGSCLQDLSITRIRSKVPWAMPSPCDESHSIYVWMDALINY 254 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 LT GY PD S +FWP + VIGKDIL+FH +YWPAFL++A L PK + H Sbjct: 255 LTALGY---PDESFKEFWPPTIQVIGKDILKFHGVYWPAFLIAAGLEPPKTLLCHAHWTV 311 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 +K+SKS GNVI P E + D LRYF++RE D Y + +N++LA+ + Sbjct: 312 DHQKMSKSKGNVISPFEAANDYSEDGLRYFILREAVPQNDANYSSKKIVNVLNSELADTL 371 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR-----VLQEIRENMQNQLIHRA 413 GNLV+R + P P + +S ++ +R V ++ RE+ + +H Sbjct: 372 GNLVNRCAGKTINP-SKEFPDPAKYWNVLQSQVADETRKALESVGRKARESYEEYNLHHV 430 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-----TVLYVTVEVIRQLAILLQAFVPK 468 + V++++ +R D +PW+L+K D S V+ + +E R A++L P+ Sbjct: 431 VDAVMNMLHCANRMIDYHEPWQLRKQIDDANSIRELKAVISLALESSRIAALILYPITPR 490 Query: 469 LANKIFDILFVADENRCF 486 L++ + D L + ENR + Sbjct: 491 LSSNLLDFLNIPRENRTW 508 >gi|83320001|ref|YP_424033.1| methionyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283887|gb|ABC01819.1| methionyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 509 Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 176/478 (36%), Positives = 283/478 (59%), Gaps = 14/478 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I YP+ H+GHAY +AD+L R+ + G + F TG+DEHGQKI A+ Sbjct: 3 KKFYITTPIYYPSGNLHLGHAYTTTLADILNRYKKEQGYETFFLTGSDEHGQKIENKAKE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 A +T +++ + F+D+ L+I YD FIRTT+ H +T + ++ + +KG IYKG Y Sbjct: 63 ANLTPLEYLNPKVQAFKDLWTKLNIDYDKFIRTTDDYHQNTVQKIFTILLEKGYIYKGQY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + E + +++V + + N + Q + E+ YF ++S +Q+ + + +S Sbjct: 123 EGIYCVSCEEFLTNEQVDENGLCKISNTKP---QLVNEDTYFLKVSQFQEFVQNILKS-- 177 Query: 185 EFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 +F++P RRNE++ +FV+ GLKDLS++R +F WGI I D ++I+YVW+DAL+NY+T G Sbjct: 178 DFLIPEYRRNEMLKNFVEPGLKDLSVTRVSFKWGIPITQDEKHIIYVWLDALSNYITALG 237 Query: 244 YLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 YL D KFW D L + GK+I+RFH+IYWP L + NL P + HG+IL+K Sbjct: 238 YLQKDDSLFKKFWQNDDCEILQLAGKEIIRFHSIYWPVMLEALNLKQPTHLLGHGWILNK 297 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKSLGNVIDP+++IE DALR+++ ++ KDG + + + NA LAN +G Sbjct: 298 NTKMSKSLGNVIDPVKIIELYSADALRFYIANDLPTEKDGNFSLELFIESFNAHLANNVG 357 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL+SR+ +MI K ++G I D+ ++ + + + NM I A+ V+ Sbjct: 358 NLISRTHNMISKYFNGYIDLNNV--NYDQELIDLGIKTIDNYIFNMDQYKISEAIKAVLE 415 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L + ++Y + + PW L+K N + T++ R +AI+ P L + D++ Sbjct: 416 LSNACNKYIEVKTPWNLEKENKIEELKTVLSTLQ--RNIAIISYLLKPVLVDSYNDMI 471 >gi|330723242|gb|AEC45612.1| methionyl-tRNA synthetase [Mycoplasma hyorhinis MCLD] Length = 510 Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 169/479 (35%), Positives = 271/479 (56%), Gaps = 7/479 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ Y++T I Y + HIGH Y +A V+ R+ +L G D TG+DEHG KI + A+ Sbjct: 2 KKTFYVTTPIYYASGDLHIGHLYTTTLAWVIKRYKQLVGFDTKMLTGSDEHGLKIQQKAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 + ++FVDQ + F ++ LDI YD F RTT +H +++K+ +KG IYKG Sbjct: 62 QNKLDIQIFVDQVVKKFENLWQKLDIDYDFFSRTTSDKHKKIVAQIFEKMLEKGLIYKGK 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 YSGWYS+ DE + + Y+ N +++ E+E YFF + + LLSY++ + Sbjct: 122 YSGWYSISDEEFLTPTQAVLKNGKYYHPVSDNLLEYFEQETYFFNMKKFAPWLLSYWKEN 181 Query: 184 PEFILPIERRNEV-ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P F++ + +NE+ +F++ GL+DLS++R +WGIK+ D ++ +YVW+DAL NYLT Sbjct: 182 PNFVINKKIQNELEKNFLEKGLEDLSVTRTDLEWGIKVISDQKHTIYVWLDALFNYLTAL 241 Query: 243 GYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 + D K+W LH++GK+I RFH IYWP FL S ++ LP + SHG+I+ Sbjct: 242 NFDLENDQDYQKYWKNGDQILHIVGKEITRFHCIYWPIFLKSLDIKLPTSILSHGWIITN 301 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GNV+DPI+++E+ + ++ F +I G DG +D++ L N+ LAN G Sbjct: 302 EGKMSKSKGNVVDPIKLLEQYDKEVIKLFFASQIPVGSDGIFDQENLTLFYNSTLANNFG 361 Query: 360 NLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 NL++R+++MI K++D + E D+ I ++ N + +A +V Sbjct: 362 NLITRTITMIFKNFDRPVRYKKEELLEEDKQIFEAIIETKNNYIKHFDNYELDKAFKEVF 421 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 SL +++ Y D KPW +TN DR +L + I + LL + + K+ IL Sbjct: 422 SLSKKLNGYIDITKPWS--ETNKDRLEVILNTLINGIYAVNTLLSVCLKNTSQKVLKIL 478 >gi|304373127|ref|YP_003856336.1| methionyl tRNA synthetase [Mycoplasma hyorhinis HUB-1] gi|304309318|gb|ADM21798.1| methionyl tRNA synthetase [Mycoplasma hyorhinis HUB-1] Length = 510 Score = 330 bits (846), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 168/479 (35%), Positives = 271/479 (56%), Gaps = 7/479 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ Y++T I Y + HIGH Y +A V+ R+ +L G D TG+DEHG KI + A+ Sbjct: 2 KKTFYVTTPIYYASGDLHIGHLYTTTLAWVIKRYKQLVGFDTKMLTGSDEHGLKIQQKAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 + ++FVDQ + F ++ LDI YD F RTT +H +++K+ +KG IYKG Sbjct: 62 QNKLDIQIFVDQVVKKFENLWQKLDIDYDFFSRTTSDKHKKIVAQIFEKMLEKGLIYKGK 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 YSGWYS+ DE + + Y+ N +++ E+E YFF + + LLSY++ + Sbjct: 122 YSGWYSISDEEFLTPTQAVLKNGKYYHPVSDNLLEYFEQETYFFNMKKFAPWLLSYWKEN 181 Query: 184 PEFILPIERRNEV-ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P F++ + +NE+ +F++ GL+DLS++R +WGIK+ D ++ +YVW+DAL NYLT Sbjct: 182 PIFVINKKIQNELEKNFLEKGLEDLSVTRTDLEWGIKVISDQKHTIYVWLDALFNYLTAL 241 Query: 243 GYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 + D K+W LH++GK+I RFH IYWP FL S ++ LP + SHG+I+ Sbjct: 242 NFDLENDQDYQKYWKNGDQILHIVGKEITRFHCIYWPIFLKSLDIKLPTSILSHGWIITN 301 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GNV+DPI+++E+ + ++ F +I G DG +D++ L N+ LAN G Sbjct: 302 EGKMSKSKGNVVDPIKLLEQYDKEVIKLFFASQIPVGSDGIFDQENLTLFYNSTLANNFG 361 Query: 360 NLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 NL++R+++MI K++D + E D+ I ++ N + +A ++ Sbjct: 362 NLITRTITMIFKNFDRAVRYKKEELLEEDKQIFEAIIETKNNYVKHFDNYELDKAFKEIF 421 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 SL +++ Y D KPW +TN DR +L + I + LL + + K+ IL Sbjct: 422 SLSKKLNGYIDITKPWS--ETNKDRLEVILNTLINGIYAVNTLLSVCLKNTSQKVLKIL 478 >gi|323451800|gb|EGB07676.1| hypothetical protein AURANDRAFT_71793 [Aureococcus anophagefferens] Length = 1349 Score = 330 bits (845), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 171/406 (42%), Positives = 247/406 (60%), Gaps = 10/406 (2%) Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW-MEEEGYFF 167 LWK + G IY G Y GWY +RDE YY + E+ DG+ V+W +E YFF Sbjct: 939 LWKALEANGMIYLGSYEGWYCVRDECYYTESELV---DGKAPTGAD--VEWKAKEPSYFF 993 Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQY 226 +LSA+++KL+ YE + + P RRNEV+SF+K L+DLS+SR TF WG+ +P D + Sbjct: 994 KLSAFREKLIDLYEGDEDALGPKSRRNEVLSFLKGEELRDLSISRTTFKWGLSVPGDDDH 1053 Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++YVW+DAL NYLT GY D+ D + W HV+GKDILRFHA+YWPA LL+A+LP Sbjct: 1054 VIYVWVDALANYLTALGYGDDDDEWR-DMWAGATHVVGKDILRFHAVYWPALLLAADLPP 1112 Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 PKK+F+HG+ G KISKSLGNV+ P E++ + GVDA RYFL+ E+ G DG + + + Sbjct: 1113 PKKIFAHGWWTKDGAKISKSLGNVVVPAELLADYGVDATRYFLLSEVPFGGDGDFSRTAM 1172 Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENM 405 N LAN +GNL R +MI K+ G P P T+ D ++L+ + +R + Sbjct: 1173 LAAANGFLANAVGNLCQRCCAMIAKNCGGAAPALPDEPTDDDAALLAAARGLGDAMRPHA 1232 Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465 + AL++V ++V +RYFD +PW+L+K++P+R VL V++E +R +AI Q F Sbjct: 1233 DALRLDGALSEVEAVVRAANRYFDRAEPWKLRKSDPERMGDVLAVSLETLRCIAIAYQPF 1292 Query: 466 VPKLANKIFDILFVAD-ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 +P A ++ +L VA+ +R +L P P+FPR Sbjct: 1293 MPDAAGRMLALLGVAEGPDRALAALPAGGVPAGAALPKPKPVFPRI 1338 >gi|14318634|gb|AAH09115.1| MARS2 protein [Homo sapiens] Length = 594 Score = 330 bits (845), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 187/511 (36%), Positives = 272/511 (53%), Gaps = 30/511 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAA 62 + Y +T I Y NA PHIGH Y ++AD L R RL G F+TGTDEHG KI +AA Sbjct: 45 RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 104 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ D+ S F+ + IS DFIRTTE RH + W + +G +YKG Sbjct: 105 ATAGLAPTELCDRVSEQFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKG 164 Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY DE + + +V + G G + +PV W +EE Y FRLS ++ L Sbjct: 165 VYEGWYCASDECFLPEAKVTQQPGPSGDSFPVSLESGHPVSWTKEENYIFRLSQFRKPLQ 224 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235 + +P+ I P + V+ ++ L DLS+SR++ WGI +P D +YVW+DAL Sbjct: 225 RWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 284 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYLT GY P+ +WPA H+IGKDIL+FHAIYWPAFLL A + P+++ H Sbjct: 285 VNYLTVIGY---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRICVHSH 341 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 G+K+SKSLGNV+DP + VD RYFL+R+ D Y + + K +N++LA Sbjct: 342 WTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELA 401 Query: 356 NGIGNLVSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILSVCSRVLQEI 401 + +G L++R + + + Y T PG S D +++S + + +++ Sbjct: 402 DALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQV 461 Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458 ++ N I++AL V S V + + + PW+L +P A TVL+V +E +R Sbjct: 462 ADHYDNFRIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVF 521 Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489 LLQ P LA+K+ L V+ R L Sbjct: 522 GTLLQPVTPSLADKLLSRLGVSASERSLGEL 552 >gi|24308436|ref|NP_612404.1| methionyl-tRNA synthetase, mitochondrial precursor [Homo sapiens] gi|85541638|sp|Q96GW9|SYMM_HUMAN RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName: Full=Methionine--tRNA ligase 2; AltName: Full=Mitochondrial methionine--tRNA ligase; Short=MtMetRS; Flags: Precursor gi|21758066|dbj|BAC05238.1| unnamed protein product [Homo sapiens] gi|62702320|gb|AAX93244.1| unknown [Homo sapiens] gi|116497019|gb|AAI26295.1| Methionyl-tRNA synthetase 2, mitochondrial [Homo sapiens] gi|119590576|gb|EAW70170.1| methionine-tRNA synthetase 2 (mitochondrial) [Homo sapiens] gi|313883188|gb|ADR83080.1| methionyl-tRNA synthetase 2, mitochondrial [synthetic construct] Length = 593 Score = 329 bits (844), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 187/511 (36%), Positives = 272/511 (53%), Gaps = 30/511 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAA 62 + Y +T I Y NA PHIGH Y ++AD L R RL G F+TGTDEHG KI +AA Sbjct: 44 RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 103 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ D+ S F+ + IS DFIRTTE RH + W + +G +YKG Sbjct: 104 ATAGLAPTELCDRVSEQFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKG 163 Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY DE + + +V + G G + +PV W +EE Y FRLS ++ L Sbjct: 164 VYEGWYCASDECFLPEAKVTQQPGPSGDSFPVSLESGHPVSWTKEENYIFRLSQFRKPLQ 223 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235 + +P+ I P + V+ ++ L DLS+SR++ WGI +P D +YVW+DAL Sbjct: 224 RWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 283 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYLT GY P+ +WPA H+IGKDIL+FHAIYWPAFLL A + P+++ H Sbjct: 284 VNYLTVIGY---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRICVHSH 340 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 G+K+SKSLGNV+DP + VD RYFL+R+ D Y + + K +N++LA Sbjct: 341 WTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELA 400 Query: 356 NGIGNLVSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILSVCSRVLQEI 401 + +G L++R + + + Y T PG S D +++S + + +++ Sbjct: 401 DALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQV 460 Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458 ++ N I++AL V S V + + + PW+L +P A TVL+V +E +R Sbjct: 461 ADHYDNFRIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVF 520 Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489 LLQ P LA+K+ L V+ R L Sbjct: 521 GTLLQPVTPSLADKLLSRLGVSASERSLGEL 551 >gi|256384330|gb|ACU78900.1| methionine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12] gi|256385163|gb|ACU79732.1| methionine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455562|gb|ADH21797.1| methionine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 509 Score = 329 bits (844), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 173/478 (36%), Positives = 284/478 (59%), Gaps = 14/478 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I YP+ H+GHAY +AD+L R+ + G + F TG+DEHGQKI A+ Sbjct: 3 KKFYITTPIYYPSGNLHLGHAYTTTLADILNRYKKEQGYETFFLTGSDEHGQKIENKAKE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 A +T +++ + F+D+ L+I+YD FIRTT+ H + ++ + +KG IYKG Y Sbjct: 63 ANLTPLEYLNPKVQAFKDLWTKLNINYDKFIRTTDDYHEKAVQKIFTILLEKGYIYKGQY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + E + ++++ + + N + Q + E+ YF ++S +Q+ + + +S Sbjct: 123 EGIYCVSCEEFLTNEQIDENGLCKISNTKP---QLVNEDTYFLKVSQFQEFVQNVLKS-- 177 Query: 185 EFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 +F++P RRNE++ +FV+ GLKDLS++R +F WGI I +D ++I+YVW+DAL+NY+T G Sbjct: 178 DFLIPEYRRNEMLKNFVEPGLKDLSVTRVSFKWGIPITEDQRHIIYVWLDALSNYITALG 237 Query: 244 YLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 YL D KFW D L + GK+I+RFH+IYWP L + NL P + HG+IL+K Sbjct: 238 YLQEDDSLFKKFWQNDDCEILQLAGKEIIRFHSIYWPVMLEALNLKQPTHLLGHGWILNK 297 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKSLGNVIDP+++IE DALR+++ ++ KDG + + + NA LAN +G Sbjct: 298 NTKMSKSLGNVIDPVKIIELYSADALRFYIANDLPTEKDGNFSLELFIESFNAHLANNVG 357 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL+SR+ +MI K ++G I D+ ++++ + + NM I ++ V+ Sbjct: 358 NLISRTHNMISKYFNGYINLSNV--NYDQELINLGIKTIDNYVFNMDQYKISESIKAVLE 415 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L + ++Y + + PW L+K N + T++ R +AI+ P L + D++ Sbjct: 416 LSNACNKYIETKAPWNLEKENKIEELKTVLATLQ--RNIAIISYLLKPVLVDSYKDMI 471 >gi|78212864|ref|YP_381643.1| methionyl-tRNA synthetase [Synechococcus sp. CC9605] gi|78197323|gb|ABB35088.1| methionyl-tRNA synthetase [Synechococcus sp. CC9605] Length = 514 Score = 329 bits (843), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 173/453 (38%), Positives = 250/453 (55%), Gaps = 9/453 (1%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y N +PH+G Y + D LARF RL G V F TG DEHGQKI + A+ ++ Sbjct: 5 LTTPLYYVNDRPHLGSTYTTLACDALARFERLLGEKVTFVTGVDEHGQKIQRTAERQQLS 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D+ S +RD+ + IS D F+RTT RH + ++++ GDI G +GWY Sbjct: 65 PQDHCDRVSSRYRDLWNQWGISDDRFVRTTNPRHLELVGEFYERVKASGDIVVGKQTGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E Y +D A+ P++W +EE FFRLS YQ + + +FI Sbjct: 125 CVDCEEYKDDP---AEAESPSCPIHRKPLEWRDEENLFFRLSRYQSAIEELV-ARDDFIA 180 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT---GYL 245 P+ RR EV +FV GL D S+SR WG+ + D P + YVW DAL YLT G Sbjct: 181 PVSRRQEVRNFVAQGLHDFSISRVNVSWGLPVHDHPGHTFYVWFDALLGYLTALLDDGEA 240 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 + D + WPA +HVIGKDILRFHA++WPA +SA LP+P+KVF HGF+ +G+K+ K Sbjct: 241 VSLDRLASCGWPASVHVIGKDILRFHAVFWPAMCMSAGLPVPQKVFGHGFLTREGQKMGK 300 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGNV+DP ++E G DA+R++L+R+I G DG + + VN DLAN IGNL++R+ Sbjct: 301 SLGNVLDPELLLERCGTDAVRWYLLRDIQFGDDGDFQQQRFVDLVNNDLANTIGNLLNRT 360 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 SM K +D +P GA +E+D + + + + E M A ++ L + Sbjct: 361 SSMARKWFDDGVPPAGAASEADHPLALKAAETISTVMEAMPQLAFKTAAESILQLAIAAN 420 Query: 426 RYFDAQKPWELKKTNPDRASTV--LYVTVEVIR 456 + + PW K A L+ +E R Sbjct: 421 GHLNDTAPWSRMKEPGQEAGVAEDLFAVLETTR 453 >gi|37196758|dbj|BAC92749.1| mitochondrial methionyl-tRNA synthetase [Homo sapiens] Length = 593 Score = 329 bits (843), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 187/511 (36%), Positives = 272/511 (53%), Gaps = 30/511 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAA 62 + Y +T I Y NA PHIGH Y ++AD L R RL G F+TGTDEHG KI +AA Sbjct: 44 RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 103 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ D+ S F+ + IS DFIRTTE RH + W + +G +YKG Sbjct: 104 ATAGLAPTELCDRVSEQFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKG 163 Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY DE + + +V + G G + +PV W +EE Y FRLS ++ L Sbjct: 164 VYEGWYCASDECFLPEAKVTQQPGPSGDSFPVSLESGHPVSWTKEENYIFRLSQFRKPLQ 223 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235 + +P+ I P + V+ ++ L DLS+SR++ WGI +P D +YVW+DAL Sbjct: 224 RWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 283 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYLT GY P+ +WPA H+IGKDIL+FHAIYWPAFLL A + P+++ H Sbjct: 284 VNYLTVIGY---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRICVHSH 340 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 G+K+SKSLGNV+DP + VD RYFL+R+ D Y + + K +N++LA Sbjct: 341 WTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELA 400 Query: 356 NGIGNLVSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILSVCSRVLQEI 401 + +G L++R + + + Y T PG S D +++S + + +++ Sbjct: 401 DALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQV 460 Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458 ++ N I++AL V S V + + + PW+L +P A TVL+V +E +R Sbjct: 461 ADHYDNFRIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVF 520 Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489 LLQ P LA+K+ L V+ R L Sbjct: 521 GTLLQPVTPSLADKMMSRLGVSASERSLGEL 551 >gi|50549799|ref|XP_502371.1| YALI0D03619p [Yarrowia lipolytica] gi|49648239|emb|CAG80559.1| YALI0D03619p [Yarrowia lipolytica] Length = 532 Score = 329 bits (843), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 176/495 (35%), Positives = 277/495 (55%), Gaps = 27/495 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I YPNA+PH+GH Y M++ADV+ R++ L+G D TG DEHG KI AA+ + Sbjct: 23 YVTTPIFYPNAEPHVGHLYSMVLADVIKRYNGLNGKDTYLLTGIDEHGLKIQTAAEKLNL 82 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 K+ DQ + F+ +A+V +I + F+RTT+ H +T +W +++ G IYKG +SG+ Sbjct: 83 QPKILCDQLAEKFKQLAEVGNIDNNRFMRTTDADHVNTVNDMWDRLTKAGYIYKGSHSGY 142 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 Y + DE YY D+ ++ +G+ + + V+W EEE YFFRLSA +DKLL +Y ++PEF Sbjct: 143 YCVSDETYYPRDKCHE-VNGRLVSIETGKEVEWTEEENYFFRLSAMRDKLLEFYNANPEF 201 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 ++P E ++ V L DLS+SR T WGI +P D ++YVW+DAL NY T G+ Sbjct: 202 VMPKEVYRGIVDEVSRDLPDLSISRPTNRLSWGIPVPGDDSQVIYVWLDALVNYATAQGF 261 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + +H++GKDI RFHAIYWPAFLL+A + PK V H + +G+K+S Sbjct: 262 DTVSEA---------VHIVGKDIQRFHAIYWPAFLLAAGIKPPKSVLVHSHWISEGQKMS 312 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS+GNV+DP+ VI + G D++R+ L+ + KD + + + ++ N L N +GNL+ R Sbjct: 313 KSIGNVVDPMHVISKYGSDSVRFLLMCDGHLHKDNDFTETKIAEKHNTMLVNKLGNLLMR 372 Query: 365 SVSMIL-----------KDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 S K + M G FT + ++ + + +M + Sbjct: 373 ITSAKFNLVDSLEQPRQKTVEDMAEFFGPEFTTTRNELIRALKELPDVYKADMARGSTPK 432 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + + +++ +++ + KPW K+ + + +L E R IL+Q F P+ A K Sbjct: 433 TITDLYYVINLANKHVEETKPWSFKEK--EIPAMILREAAETARIALILMQPFTPEFATK 490 Query: 473 IFDILFVADENRCFQ 487 D L V E R + Sbjct: 491 GLDRLGVKKERRTME 505 >gi|302801510|ref|XP_002982511.1| hypothetical protein SELMODRAFT_155208 [Selaginella moellendorffii] gi|300149610|gb|EFJ16264.1| hypothetical protein SELMODRAFT_155208 [Selaginella moellendorffii] Length = 509 Score = 328 bits (842), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 185/498 (37%), Positives = 267/498 (53%), Gaps = 14/498 (2%) Query: 22 IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81 +G AY I AD ARF RL G +V+F TGTDEHG+KIA AA G K D + + Sbjct: 1 MGSAYPTIAADAFARFQRLQGRNVVFVTGTDEHGEKIATAAAAKGRKPKEHCDLIANEYA 60 Query: 82 DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 + L+ISYD FIRTT++ H +K++ DKGDIY Y G Y + E Y + ++ Sbjct: 61 SLWKDLNISYDKFIRTTDEAHERAVEQFYKRVYDKGDIYCANYEGLYCVNCEEYKDAKDL 120 Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201 + Q P +E+ YFF LS YQ +L + P+F+ P R NEV+ +VK Sbjct: 121 I---EEQCCPIHRKPCVERKEKNYFFALSKYQSRLEELLSTRPDFVRPPFRMNEVLGWVK 177 Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT--GYLDNPDGSKAKFWPAD 259 GL D S+SR+ +WGI +P D + +YVW DAL Y++ G P+ + A WPA Sbjct: 178 EGLHDFSISREAVEWGIPVPTDKKQTIYVWFDALLGYISALLDGKEVTPENAAASGWPAS 237 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 +H+IGKDILRFHA+YWPA L SA +P+ VF HGF+ G K+ KSLGN I+P E++ Sbjct: 238 VHIIGKDILRFHAVYWPAMLWSAGFAIPETVFGHGFLTKDGLKMGKSLGNTIEPQELVSR 297 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 GVD++RYF + E+ G+DG Y ++ VNA LAN IGNL++R++ ++ K+ IP Sbjct: 298 FGVDSVRYFFLNEMEFGRDGDYSEERFITIVNAHLANTIGNLLNRTLGLLKKNCASTIPV 357 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE--LK 437 + + + + A ++SL + + Y + + PW + Sbjct: 358 DSESIPEENPVRVFAEAAVALAKRRYSELHFSSACEALLSLANTGNAYLEERAPWTGFKQ 417 Query: 438 KTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR--- 492 K P + L V +E +R L++ L VP L +++ L DE+ S D Sbjct: 418 KGTPAAEAAAKDLAVILESVRILSVALSPVVPDLCRRMWLQLGYQDEHFNQISWDDTRWG 477 Query: 493 -LKPGFMLHKTFDPIFPR 509 LK G L T P+FP+ Sbjct: 478 GLKAG-QLVATPSPVFPK 494 >gi|313664963|ref|YP_004046834.1| methionine--tRNA ligase [Mycoplasma leachii PG50] gi|312949209|gb|ADR23805.1| methionine--tRNA ligase [Mycoplasma leachii PG50] Length = 509 Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 176/478 (36%), Positives = 285/478 (59%), Gaps = 14/478 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I YP+ H+GHAY +AD+L R+ + G + F TG+DEHGQKI A+ Sbjct: 3 KKFYITTPIYYPSGNLHLGHAYTTTLADILNRYKKEQGYETFFLTGSDEHGQKIENKAKE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 A +T +++ + F+D+ L+I+YD FIRTT+ H + + ++ + +KG IYKG Y Sbjct: 63 ANLTPLEYLNPKVQTFKDLWAKLNINYDKFIRTTDDYHEEAVQKIFTILLEKGYIYKGQY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + E + ++++ +G + P Q + E+ YF ++S +Q+ + + +S Sbjct: 123 EGIYCVSCEEFLTNEQI--DENGLCKISSTKP-QLVNEDTYFLKVSQFQEFVQNILKS-- 177 Query: 185 EFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 +F++P RRNE++ +FV+ GLKDLS++R +F WGI I D ++I+YVW+DAL+NY+T G Sbjct: 178 DFLIPEYRRNEMLKNFVEPGLKDLSVTRVSFKWGIPITQDEKHIIYVWLDALSNYITALG 237 Query: 244 YLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 YL D KFW D L + GK+I+RFH+IYWP L + NL P + HG+IL+K Sbjct: 238 YLQEDDSLFKKFWQNDDCEILQLAGKEIIRFHSIYWPVILEALNLKQPTHLLGHGWILNK 297 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKSLGNVIDP+++IE DALR+++ ++ KDG + + + NA LAN +G Sbjct: 298 NTKMSKSLGNVIDPVKIIELYSADALRFYISNDLPTEKDGNFSLELFIESFNAHLANNVG 357 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL+SR+ +MI K ++G I + D+ ++ + + + NM I A+ V+ Sbjct: 358 NLISRTHNMISKYFNGYIDLNNV--KYDQELIDLGIKTIDNYIFNMDQYKISEAIKVVLE 415 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L + ++Y + + PW L+K N R + V + + R +AI+ P L + D++ Sbjct: 416 LSNACNKYIEVKTPWNLEKEN--RIEELKTVLITLQRNIAIISYLLKPILVDSYKDMI 471 >gi|237744196|ref|ZP_04574677.1| methionyl-tRNA synthetase [Fusobacterium sp. 7_1] gi|229431425|gb|EEO41637.1| methionyl-tRNA synthetase [Fusobacterium sp. 7_1] Length = 563 Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 181/440 (41%), Positives = 268/440 (60%), Gaps = 15/440 (3%) Query: 79 NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138 NF++M L+I YDDFIRTTE RH + + ++ KGDIYKG Y G Y + E ++ + Sbjct: 4 NFKNMWAALNIKYDDFIRTTEDRHKKAVKRILDMVNAKGDIYKGEYEGKYCISCETFFPE 63 Query: 139 DEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197 +++ DG ++ ++EE YFF++S Y D LL + E HP+FILP RRNEVI Sbjct: 64 NQL----DGSNKCPDCGKELRVLKEESYFFKMSKYADALLKHIEEHPDFILPHSRRNEVI 119 Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257 SF+K GL+DLS+SR TF WGI I P +I YVW DALTNY+T+ G+ +N + KFW Sbjct: 120 SFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYITSAGF-ENDEKKFDKFWN 178 Query: 258 AD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315 +H+IGKDI+RFHAI WP LLSA + LP + +HG+ +GEK+SKS GNV++P + Sbjct: 179 NARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGEKMSKSRGNVVNPYD 238 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 I++ GVDA RY+L+RE G DG Y G+ R+N+DLAN +GNL++R++ M K ++G Sbjct: 239 EIKKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLANDLGNLLNRTLGMYKKYFNG 298 Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 ++ D I S+ + V++++ + M RAL + +S +++Y D PW Sbjct: 299 VVVASSTTEPIDNEIKSMFNDVIKDVEKYMYLFEFSRALETIWKFISRLNKYIDETMPWS 358 Query: 436 LKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491 L K T R +TV+ + E + ++A L+ ++P+ A KI + L + + N F + + Sbjct: 359 LAKDETKKARLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGIDKDITNIKFDDIKE 418 Query: 492 R--LKPGFMLHKTFDPIFPR 509 K G L + PIFPR Sbjct: 419 WHIFKAGHKLGEA-SPIFPR 437 >gi|111220457|ref|YP_711251.1| methionyl-tRNA synthetase [Frankia alni ACN14a] gi|111147989|emb|CAJ59655.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (partial) [Frankia alni ACN14a] Length = 503 Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 182/482 (37%), Positives = 271/482 (56%), Gaps = 20/482 (4%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + +++TAI Y N +PH+GHA E++ D AR R G +V TGTD++ K + A+ Sbjct: 3 RYFVTTAIPYVNGKPHVGHALELVETDAFARHLRARGDEVRCQTGTDDNALKNVQGAEAE 62 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T +V++ + F + + L +S+DDFI+T T+ RH LW +++GD Y+ Y Sbjct: 63 GITPAEYVERVAARFISLREPLSLSFDDFIKTSTDPRHRPGVEKLWAACAERGDFYRKSY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYESH 183 +G Y + E +Y+ DE+ G +H V +EE +FFRLS YQD+L + Sbjct: 123 AGLYCVGCELFYSPDELVDG-----RCPEHGTVPDLVEESNWFFRLSRYQDQLHELISTD 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 I P R+ EV+SF+++GL+D S SR + WGI +P DP ++YVW DAL NY+T Sbjct: 178 RLRIEPATRKREVLSFIEAGLEDFSASRSMSRARGWGIPVPGDPDQVIYVWFDALGNYIT 237 Query: 241 TTGYLDNPDGSKAKFW---PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 GY + D + +W A +HVIGK I+RFHA+YWPA LLSA + LP +F H ++ Sbjct: 238 APGYGTD-DATFQHWWNDSDARVHVIGKGIIRFHAVYWPAMLLSAGVRLPDTIFVHEYLT 296 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 G+KISKS GN DP +++ DALR++++R++A D Y + L R N DLAN Sbjct: 297 ADGQKISKSAGNAEDPADIVAASNTDALRWWMLRDVARSGDTDYTTERLLARANEDLANN 356 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 IGNLV+R+VSM+ + DG+IP A ++ +V + I RA V Sbjct: 357 IGNLVNRTVSMVKRYRDGVIPPVAADNPGAAALRAVREQAPATIDAAFTAFDFRRAAEAV 416 Query: 418 ISLVSEVDRYFDAQKPWELKK------TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 ++ +E +RY +A +PW+L K P VL V R+LA L F+P A Sbjct: 417 TAIGNEGNRYVEAARPWDLAKAERKEDAGPAALDAVLAELVATCRELAAHLTPFLPDAAP 476 Query: 472 KI 473 +I Sbjct: 477 RI 478 >gi|47226183|emb|CAG08330.1| unnamed protein product [Tetraodon nigroviridis] Length = 492 Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 181/475 (38%), Positives = 263/475 (55%), Gaps = 23/475 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E YI+T I Y NA PH+GH Y ++IAD R +L G + FTTGTDEHG KI +AA Sbjct: 10 ENRNYYITTPIFYVNASPHLGHLYSVVIADCFHRQKQLQGFNSRFTTGTDEHGLKIQQAA 69 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + AG F S FR++ +IS D+IRTTE RHH R W + KG IYKG Sbjct: 70 EAAGRDPLTFCTSVSERFRNLFSSCNISNTDYIRTTEPRHHRAVRHFWSVLYGKGLIYKG 129 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWYS +DE++ +V D + + + V+WM+EE Y FRLS ++ +LL Sbjct: 130 RYEGWYSTQDESFLMPSQVTTAQDSEGKEIKISLESGHKVEWMKEENYMFRLSRFRLQLL 189 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235 + +P I P + V+ ++ L DLS+SR+ WGI +PDDP+ +YVW+DAL Sbjct: 190 DWLRENPRAIQPERFYHSVLQLLQEELPDLSVSRQKSRLQWGIPVPDDPEQTIYVWLDAL 249 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYLT Y N + ++W HVIGKDIL+FHAIYWPAFLL A LPLP+ + H Sbjct: 250 VNYLTVVDYPHNHE----RWWNVAHHVIGKDILKFHAIYWPAFLLGAGLPLPQTIHVHSH 305 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 G+K+SKSLGNV+DP E + D LRYFL+R+ D Y D ++K +N++LA Sbjct: 306 WTVAGKKMSKSLGNVVDPRERSQAFTNDGLRYFLLRQGVPDADCDYRDDKVRKLLNSELA 365 Query: 356 NGIGNLVSRSVSMILKDYDGMIP-TPGAF--------TESDESILSVCSRVLQEIRENMQ 406 + +G L++R + L P P AF + D +L + + ++ + Sbjct: 366 DALGGLLNRCTAPALNPAQVYAPFCPDAFPGQRGGRAVDEDYRMLDSVKHLPAVVEQHFE 425 Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458 N +++AL + + V + + + PW+L + + STV++V+ ++ L Sbjct: 426 NMHVYKALEAIGACVRQTNGFVQRHAPWKLDRGDAGDQRWLSTVIHVSPRMLEDL 480 >gi|307106870|gb|EFN55115.1| hypothetical protein CHLNCDRAFT_31569 [Chlorella variabilis] Length = 598 Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 196/515 (38%), Positives = 284/515 (55%), Gaps = 18/515 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + ++T + Y NA PH+G AY I AD LARF RL G V F TGTDEHG+KIA AA Sbjct: 61 QPFTVTTPLYYVNAAPHMGSAYPTIAADALARFQRLQGRRVTFITGTDEHGEKIALAAAA 120 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ K D +++ + LDI YD FIRTT+ RH + +++ +GDIYK Y Sbjct: 121 RGMAPKEHCDDVVASYKQLWRDLDIGYDSFIRTTDARHEALVVSVLERVWQRGDIYKADY 180 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + E Y DE AD + P +EE YFF LS YQ +L S Sbjct: 181 EGHYCVDCEEY--KDEADMDAD-KNCPVHRKPCVERKEENYFFALSKYQAQLEELCSSPG 237 Query: 185 E-FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 F+ P RRNEV+ +VKSG++D S+SR +WGI IP DP+ +YVW DAL YL+ G Sbjct: 238 TCFVQPESRRNEVLGWVKSGVRDFSISRAAVEWGIPIPRDPKQTVYVWFDALNGYLS--G 295 Query: 244 YLD-------NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 L +P+ A WPA LH+IGKDILRFHA+YWPA LLSA LP P +V+ HGF+ Sbjct: 296 LLPEGAAADASPEALAAAGWPASLHIIGKDILRFHAVYWPAMLLSAGLPPPDRVYGHGFL 355 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 G K+ KSLGNV++P ++ G DA+RY+ +REI G+DG + ++ + VNA LAN Sbjct: 356 TKDGLKMGKSLGNVLEPRALVGAYGADAVRYYFLREIVFGQDGDFSEERFRNIVNASLAN 415 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNL++R+++++ K+ G +P A +D + ++ + + + +A Sbjct: 416 DVGNLLNRTLNLLRKNCGGEVPLDAADVAADHPLRALAAEKAPAVADAFARLRFDQACEA 475 Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDR----ASTVLYVTVEVIRQLAILLQAFVPKLANK 472 +S+ ++Y + PW K + A+ VL +E +R +A+LL P L+ + Sbjct: 476 ALSISGRGNQYLEETAPWTAFKKGSEEQRAEAAAVLAAVLEAVRVVAVLLSPVTPSLSAR 535 Query: 473 IFDIL-FVADENRCFQSLDQRLKPGFMLHKTFDPI 506 I+ L F ++++ D H T P+ Sbjct: 536 IYQQLGFTPEQHQALTWADTEWGALKQGHATPQPV 570 >gi|162287115|ref|NP_001079838.1| methionyl-tRNA synthetase, mitochondrial precursor [Xenopus laevis] gi|82240391|sp|Q7T0Z0|SYMM_XENLA RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName: Full=Methionine--tRNA ligase 2; AltName: Full=Mitochondrial methionine--tRNA ligase; Short=MtMetRS; Flags: Precursor gi|33417075|gb|AAH55977.1| MGC68850 protein [Xenopus laevis] Length = 562 Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 180/505 (35%), Positives = 278/505 (55%), Gaps = 28/505 (5%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 + R LY +T I Y NA PH+GH Y ++ADV R+ + G++ +TGTDEHG K+ + Sbjct: 31 VASRPHLY-TTPIFYVNAAPHLGHVYSALLADVQHRYSAMCGIESKLSTGTDEHGMKVQQ 89 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA G+ + F S FR + D LDISY DF+RTTE RH + W + ++G IY Sbjct: 90 AASALGLDPQTFCSTVSLQFRTIFDALDISYTDFVRTTEPRHIEAVSRFWMTLEEQGYIY 149 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175 KG Y GWY DEA+ ++ + ++G + + V W+ EE Y FRLS+ + Sbjct: 150 KGTYEGWYCTSDEAFLSEGQTAEHTDFEGNKIRVSLESGHQVHWVSEENYMFRLSSLRPA 209 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWID 233 LL++ ++ P + P V +++ L DLS+SR+ WGI +P D +++YVW+D Sbjct: 210 LLNWLQTEP--VHPAPFLKLVHHWLEEELPDLSVSRQRSRLSWGIPVPSDSSHVIYVWLD 267 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 AL NYLT GY NP + W H++GKDILRFHAIYWPAFL++A LP P+K+ H Sbjct: 268 ALVNYLTAAGY-PNPQLAP---WGPSTHLLGKDILRFHAIYWPAFLIAAGLPPPQKLLVH 323 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 +G K+SKSL NV+DP + I D LRY+L+R A +D + + +N++ Sbjct: 324 SHWTSEGTKMSKSLKNVVDPSDCIRRYTTDGLRYYLLRHGAPERDCDFTHRTARMLLNSE 383 Query: 354 LANGIGNLVSRSVSMILK--------DYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405 LA+ +G L++R + + Y+ P A + +L + E+ + + Sbjct: 384 LADALGGLLNRCTAPAINPMQHFPKFQYENF---PVASRDQVHDLLGALQELPVEVDQWI 440 Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILL 462 + +H+AL + + V + +F +Q PW+L++ A+ +V+Y+T+E +R A LL Sbjct: 441 KKFQVHKALECIDACVRRSNAFFQSQAPWKLQRGVEKEAALRDSVIYLTLEALRLYATLL 500 Query: 463 QAFVPKLANKIFDILFVADENRCFQ 487 VP LA + D L V + R + Sbjct: 501 HPAVPGLATVVLDRLGVPHKMRTLK 525 >gi|331703032|ref|YP_004399719.1| methionine tRNA synthetase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801587|emb|CBW53740.1| Methionine tRNA synthetase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 509 Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 173/478 (36%), Positives = 283/478 (59%), Gaps = 14/478 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I YP+ H+GHAY +AD+L R+ + G + F TG+DEHGQKI A+ Sbjct: 3 KKFYITTPIYYPSGNLHLGHAYTTTLADILNRYKKEQGYETFFLTGSDEHGQKIENKAKE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 A +T +++ + F+D+ L+I YD FIRTT+ H + ++ + +KG IYKG Y Sbjct: 63 ANLTPLEYLNPKVQAFKDLWTKLNIDYDKFIRTTDDYHEKAVQRIFTILLEKGYIYKGQY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + E + ++++ + + N + Q + E+ YF ++S +Q+ + + +S Sbjct: 123 EGIYCVSCEEFLTNEQIDENGLCKISNTKP---QLVNEDTYFLKVSQFQEFVQNVLKS-- 177 Query: 185 EFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 +F++P RRNE++ +FV+ GLKDLS++R +F WGI I +D ++I+YVW+DAL+NY+T G Sbjct: 178 DFLIPEYRRNEMLKNFVEPGLKDLSVTRVSFKWGIPITEDQRHIIYVWLDALSNYITALG 237 Query: 244 YLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 YL D KFW D L + GK+I+RFH+IYWP L + NL P + HG+IL+K Sbjct: 238 YLQEDDSLFKKFWQNDECEILQLAGKEIIRFHSIYWPVMLEALNLKQPTHLLGHGWILNK 297 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKSLGNVIDP+++IE D LR+++ ++ KDG + + + NA LAN +G Sbjct: 298 NTKMSKSLGNVIDPVKIIELYSADPLRFYIANDLPTEKDGNFSLELFIESFNAHLANNVG 357 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL+SR+ +MI K ++G I + D+ ++++ + + NM I A+ V+ Sbjct: 358 NLISRTHNMISKYFNGYIDLNNV--KYDQELINLGIKTIDNYVFNMDQYKISEAIKVVLE 415 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L + ++Y + + PW L+K N + T++ R +AI+ P L + D++ Sbjct: 416 LSNACNKYIETKAPWNLEKENKIEELKTVLATLQ--RNIAIISYLLKPILVDSYKDMI 471 >gi|157103464|ref|XP_001647993.1| methionine-tRNA synthetase [Aedes aegypti] gi|108880524|gb|EAT44749.1| methionine-tRNA synthetase [Aedes aegypti] Length = 553 Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 179/500 (35%), Positives = 274/500 (54%), Gaps = 19/500 (3%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARF----HRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++T I Y NA PHIGH Y +I D + RF H +F+TGTDEHG KI +AA + Sbjct: 20 VTTPIFYVNAAPHIGHLYSAVITDAIHRFNNLVHPTAQASSIFSTGTDEHGTKIQQAAAS 79 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 V + Q S +R + +IS+ +IRTT+ H + + W + G IY Y Sbjct: 80 HSVPVDTYCQQISDRYRSLFRNFNISHTRYIRTTDPDHTEAVQCFWNALECSGSIYSAQY 139 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 SGWY + DE + ++++ + G +A+ +PV+W EE+ + FRL YQD +L + + Sbjct: 140 SGWYCIPDETFLTENQLKENNLGVKVSAESGHPVEWTEEKNFMFRLEKYQDDVLYWIKGC 199 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 + I+PI+ R ++ F++ L D+S+SR WGI +P DP +YVW+DAL NYLT Sbjct: 200 EDRIVPIKFRKILLDFLQEKLPDISISRPKSRVSWGIDVPSDPTQTVYVWLDALVNYLTV 259 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 +GY P WP + V+GKDIL+FH IYWPAFL++A L P+K+ H GE Sbjct: 260 SGY---PQEGFVHRWPPTVQVLGKDILKFHGIYWPAFLIAAGLEPPRKLLVHSHWTVDGE 316 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNV+DP E + +RYFL+RE DG Y + + +NA+LA+ GNL Sbjct: 317 KMSKSKGNVVDPNERASLYTHEGIRYFLLREGVAHSDGNYSDTKIMRILNAELADTFGNL 376 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH-------RAL 414 +SR +L + + ++P + S + V ++L+ + E + H + Sbjct: 377 LSRCCGKVL-NPEAVVPVVQQDEFNTLSQMDVTKKMLELLNELPDKCMTHYRQYNFYLVV 435 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKI 473 VI ++ + +F++ PW+LKK + +L VT+EV+RQ I+LQ VP ++ K+ Sbjct: 436 DSVIQVLHATNNFFESTAPWKLKKPEEKQQLQAILGVTMEVLRQAGIILQPIVPIMSGKL 495 Query: 474 FDILFVADENRCFQSLDQRL 493 D L V R + L +L Sbjct: 496 LDKLSVERNRRLWTDLTLQL 515 >gi|291391982|ref|XP_002712314.1| PREDICTED: methionine-tRNA synthetase 2 [Oryctolagus cuniculus] Length = 612 Score = 326 bits (836), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 189/523 (36%), Positives = 274/523 (52%), Gaps = 34/523 (6%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKAA 62 + Y +T I Y NA PHIGH Y ++AD L R RL +TGTDEHG KI +AA Sbjct: 63 RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPSATATRLSTGTDEHGLKIQQAA 122 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ D+ S F+ + +S DFIRTTE RH + W+ + +G +YKG Sbjct: 123 ATAGLAPIELCDRVSSQFQQLFQEAGVSSTDFIRTTEARHRLAVQHFWEVLKARGLLYKG 182 Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY DE + + +V + G G+ +PV W +EE Y FRLS +Q+ L Sbjct: 183 LYEGWYCASDECFLPEAKVTRQPGPSGESCPVSLESGHPVSWTKEENYIFRLSQFQEPLR 242 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235 + +P+ I P + V+ +++ L DLS+SR++ WGI +P D +YVW+DAL Sbjct: 243 QWLRGNPQTITPEPFYHAVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 302 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYLT GY P+ +WPA H+IGKDIL+FHAIYWPA LL A L P ++ H Sbjct: 303 VNYLTVIGY---PNDEFKSWWPATSHIIGKDILKFHAIYWPALLLGAGLSPPHRICVHSH 359 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 G+K+SKSLGNV+DP +E VD RYFL+R+ D Y + + K ++++LA Sbjct: 360 WTVCGQKMSKSLGNVVDPRTCLEHYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELA 419 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT---------PGAFTES------DESILSVCSRVLQE 400 + +G L++R + + G P PG S D +++ + + ++ Sbjct: 420 DALGGLLNRCTANRINP-SGTYPAFCTTCFPSEPGLMGPSVRARAEDYALVRAVATLPKQ 478 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457 + ++ N I++AL V S V + + + PW+L NP A TVL+V +E +R Sbjct: 479 VADHFDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWENPADAPWLGTVLHVALECLRV 538 Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500 LLQ P LA+K+ L V+ R L R P F H Sbjct: 539 FGTLLQPVTPNLADKLLSRLGVSATERSLGKL--RFLPRFYGH 579 >gi|311272846|ref|XP_003133611.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like [Sus scrofa] Length = 593 Score = 326 bits (835), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 185/512 (36%), Positives = 270/512 (52%), Gaps = 32/512 (6%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKAA 62 + Y +T I Y NA PHIGH Y ++AD L R HRL F+TGTDEHG KI +AA Sbjct: 44 RAYFTTPIFYVNAAPHIGHLYSALLADALCRHHRLRVSSAAATRFSTGTDEHGLKIQQAA 103 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ D+ S F+ + DIS DFIRTTE RH + W + +G +YKG Sbjct: 104 ATAGLAPSELCDRVSAQFQQLFREADISSTDFIRTTEARHQLAVQHFWGVLKTRGLLYKG 163 Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY DE + + +V + G G +PV W +EE Y FRLS +++ L Sbjct: 164 LYEGWYCASDECFLPEAKVTRQPGPSGDLCPVSLESGHPVSWTKEENYIFRLSQFREPLQ 223 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235 + P+ I P V+ ++ L DLS+SR+ WGI +P D +YVW+DAL Sbjct: 224 RWLRGDPQAITPEPFHRAVLQWLDEELPDLSVSRRRSHLHWGIPVPGDDSQTIYVWLDAL 283 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYLT GY P+ +WP H+IGKDIL+FHAIYWPA LL A + P +++ H Sbjct: 284 VNYLTVIGY---PNAEFQSWWPTTSHIIGKDILKFHAIYWPALLLGAGMSPPHRIYVHSH 340 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 G+K+SKSLGNV+DP ++ VD RYFL+R+ D Y + + K ++++LA Sbjct: 341 WTVCGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGIPSWDCDYYDEKVVKLLDSELA 400 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT---------PGAFTES------DESILSVCSRVLQE 400 + +G L++R + + G P PG S D +++S + + ++ Sbjct: 401 DALGGLLNRCTAKRINP-SGTYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQ 459 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457 + ++ N I++AL V S V + + + PW+L +P A TVL+V +E +R Sbjct: 460 VADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPIDAPWLGTVLHVALECLRV 519 Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489 LLQ P+LA+K+ L V+ R + L Sbjct: 520 FGTLLQPVTPRLADKLLSRLGVSATERGLREL 551 >gi|187736581|ref|YP_001878693.1| methionyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835] gi|187426633|gb|ACD05912.1| methionyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835] Length = 550 Score = 326 bits (835), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 193/520 (37%), Positives = 290/520 (55%), Gaps = 23/520 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+TAI Y N PHIGHAYE ++ADVLAR+HR+ G +V F TG D+HGQK+ + A+ G+ Sbjct: 18 YITTAIDYTNGPPHIGHAYEKVLADVLARWHRMKGEEVYFLTGVDQHGQKVQQTAEKLGI 77 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + V+ + F + D L IS D + TT+ RH + + + DKG +YK Y G+ Sbjct: 78 TPQEHVNNITGQFLALWDRLGISNDGWASTTDPRHKACVQKILTDLKDKGQLYKKSYKGF 137 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 YS+R E + D E + A+G + + V +EEE ++FRL+ + + + + E +F+ Sbjct: 138 YSVRQEQFLTDKE--RDAEGN-FGPEWGEVVELEEENWYFRLTDHVEWMKQFVEKSSDFV 194 Query: 188 LPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 LP R+ EV++ + DL +SR WGI+ P DP+++ YVW DAL NY++ GYL Sbjct: 195 LPSFRKAEVLNAIDFD-SDLCISRPKSRLSWGIEFPFDPEFVTYVWFDALINYISFAGYL 253 Query: 246 DNPDGSK---AKFWPADLHVIGKDIL-RFHAIYWPAFLLSANLP---LPKKVFSHGFILH 298 PD +K WPAD VIGKDIL H +YWPA L + +P + HG+ Sbjct: 254 AEPDSGLPEFSKLWPADCEVIGKDILVPAHGVYWPAMLHAMGFSDEEMP-TLLVHGWWNI 312 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 GEK+SKS+GNV+DP + E+ G + +RY+LVR+I GKD +D D L N +LAN + Sbjct: 313 NGEKMSKSIGNVVDPNLLAEQFGPEPVRYYLVRDITTGKDANFDADRLVMLYNTELANDL 372 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 GNL +RS++M + D +I A+ E+ +++ S + + + M + + ALA + Sbjct: 373 GNLCNRSINMTRRYCDSVISGAEAYDDEASKALRSTMDQAVTLFSKYMDDNMASDALAAL 432 Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + VS + Y + Q+PW+L K + R VL +E Q L+ +P + +I Sbjct: 433 NAQVSACNAYIEQQQPWQLAKDEASAPRLRCVLRHLLECCAQTGYLIGCVLPDASARILG 492 Query: 476 ILFVADENRCFQSLDQRLKPGFML--HKTFD--PIFPRFL 511 L D R LK G + H+ D P+FPR L Sbjct: 493 QLNAGDLFRGLTP--AALKWGILPAGHRINDPAPVFPRIL 530 >gi|46123063|ref|XP_386085.1| hypothetical protein FG05909.1 [Gibberella zeae PH-1] Length = 784 Score = 326 bits (835), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 184/498 (36%), Positives = 270/498 (54%), Gaps = 42/498 (8%) Query: 28 MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87 M++ DVL R+ ++G + TGTDEHG KI +AA G++ K D NS FRD+A+V Sbjct: 1 MVLTDVLKRWKTINGKEAYLCTGTDEHGMKIQQAALKEGISPKELCDNNSNKFRDLAEVS 60 Query: 88 DISYDDFIRTTEKRHHDTCRILW---KKISDKG-DIYKGCYSGWYSLRDEAYYNDDEV-- 141 +IS+D FIRTT++ H D + W K + +G +YKG + GWY + DE +Y +D V Sbjct: 61 NISHDFFIRTTDQEHKDVVQQFWLLLKARAPEGLGLYKGKHEGWYCVSDECFYPEDLVEP 120 Query: 142 ----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197 G N V+W+ E +FF LS Y+DKLL +Y+ +P++I P R NEV Sbjct: 121 SVVPQTGRKIMASTETGNEVEWIAEHTWFFPLSRYKDKLLRFYDENPDWIQPAHRMNEVR 180 Query: 198 SFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD--NPDGSKA 253 ++V++ L+DLS++R T +WGI+ PDDP +YVW+DAL NYLT G+ + D + Sbjct: 181 NWVENHLEDLSVTRPTSRLNWGIRDPDDPTSTIYVWVDALVNYLTKAGFGTKWHADDADT 240 Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 WPAD+HV+GKDI+RFHA+YWPA L++A LPLPKK+ H K+SKSLGNV++P Sbjct: 241 GIWPADVHVVGKDIIRFHAVYWPALLMAAGLPLPKKILCHNHWTMSNRKMSKSLGNVVNP 300 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +++ +D LRYFL+R + D Y + + +L IGNL +R I ++ Sbjct: 301 FSAVQKWDLDPLRYFLMRNGSLKGDMSYSNESIMVIYEKELQANIGNLFNR----ISRNK 356 Query: 374 DGMIPTPGAFTESDE--------------------SILSVCSRVLQEIRENMQNQLIHRA 413 + T GA + S+ S IR +M + A Sbjct: 357 NFSWSTLGAVQAARNGDFDNIESSVPRGDAAPDFFSLESTLHDAPTTIRRDMDEINLSNA 416 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAST----VLYVTVEVIRQLAILLQAFVPKL 469 L V L+ E +R+ +PW++ K+ A V+Y E +R ILLQ +P Sbjct: 417 LRGVFELLREANRFISDTEPWKMTKSEDPNAKVLINWVIYECAEAVRIAGILLQPIMPTK 476 Query: 470 ANKIFDILFVADENRCFQ 487 A ++ D L V E R + Sbjct: 477 AEELLDNLGVDRERRTVE 494 >gi|159903438|ref|YP_001550782.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] gi|159888614|gb|ABX08828.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] Length = 509 Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 183/461 (39%), Positives = 262/461 (56%), Gaps = 26/461 (5%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+T + Y N +PH+G Y I D +RF RL G V F TG DEHGQKI + AQ+ +T Sbjct: 5 ITTPLYYVNDKPHLGSTYTTIACDAYSRFQRLQGNTVEFVTGVDEHGQKIQRTAQSHQIT 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 +V D+ S N++++ DI+Y FIRTT H + + K+ GDI G GWY Sbjct: 65 PQVHCDKISLNYKELWKKWDITYTSFIRTTSPSHQELVNQFFDKVVKSGDILLGNQQGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E Y +D K + P++W +EE FF LS YQ K+ S + P FI Sbjct: 125 CVGCEEYKDDPPDSKSPCCPIH---LKPLEWRDEENLFFALSKYQSKIESLV-AQPSFIQ 180 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN- 247 P+ RRNE+++FV GL+D S+SRK +WGI +P + YVW DAL YL++ + N Sbjct: 181 PLSRRNEILNFVSKGLRDFSISRKNVEWGIPVPGYKGHTFYVWFDALLGYLSSLLPMQNK 240 Query: 248 ---PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D S WPA +HVIGKDILRFHAIYWPA L+SA L LPKKVF HGF+ +G+K+ Sbjct: 241 INLADLSHYG-WPASVHVIGKDILRFHAIYWPAMLMSAGLELPKKVFGHGFLTREGQKMG 299 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSLGN++DP ++E+ G D +R++L+ +I G+DG + + + VN DLAN IGNL++R Sbjct: 300 KSLGNILDPELLLEQYGKDPIRWYLLSDIRFGQDGDFQQKRFQDLVNNDLANTIGNLLNR 359 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI-------HRALAQV 417 + +M K +D TP ++S L + + +E++ + L+ V Sbjct: 360 TSTMSRKWFDNG--TPDFDINLEDSNLKLLA------QESITSSLLAYEEFDFKTVCETV 411 Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIR 456 I L +E + Y + +PW L K +N + LY +E R Sbjct: 412 IKLATESNVYLNNTQPWTLIKEPSNKELVGYYLYNVLESCR 452 >gi|296205176|ref|XP_002749647.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial isoform 1 [Callithrix jacchus] Length = 593 Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 186/511 (36%), Positives = 271/511 (53%), Gaps = 30/511 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAA 62 + Y +T I Y NA PHIGH Y ++AD L R RL F+TGTDEHG KI +AA Sbjct: 44 RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRSPSTAATRFSTGTDEHGLKIQQAA 103 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ D+ S F+ + IS DFIRTTE RH + W + +G +YKG Sbjct: 104 ATAGLAPTELCDRISEQFQQLFQEAGISCTDFIRTTEARHRVAVQQFWGVLKSRGLLYKG 163 Query: 123 CYSGWYSLRDEAYYNDDEVY--KGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY DE + + +V G G +PV W +EE Y FRLS +++ L Sbjct: 164 LYEGWYCASDECFLPEAKVTWQPGPSGDSLPVSLESGHPVSWTKEENYIFRLSQFREPLQ 223 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235 + +P+ I P + V+ ++ L DLS+SR++ WGI +P D +YVW+DAL Sbjct: 224 RWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 283 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYLT GY P+ +WPA H+IGKDIL+FHAIYWPAFLL A + P++++ H Sbjct: 284 VNYLTVIGY---PNAEFKFWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSH 340 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 G+K+SKSLGNV+DP + VD RYFL+R+ D Y + + K +N++LA Sbjct: 341 WTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELA 400 Query: 356 NGIGNLVSRSVSMILKDYD-------GMIPT-PGAFTES------DESILSVCSRVLQEI 401 + +G L++R + + + P+ PG S D +++S + + + + Sbjct: 401 DALGGLLNRCTAKRINPSETYPAFCTNCFPSEPGLMGPSVRAQAEDYALVSAVATLPKRV 460 Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458 ++ N I++AL V S V + + + PW+L +P A STVL+V +E +R Sbjct: 461 ADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWDSPVDAPWLSTVLHVALECLRVF 520 Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489 LLQ P LA+K+ L V+ R L Sbjct: 521 GTLLQPVTPSLADKLLSRLGVSVSERSLGKL 551 >gi|301622256|ref|XP_002940449.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like [Xenopus (Silurana) tropicalis] Length = 562 Score = 325 bits (832), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 189/534 (35%), Positives = 288/534 (53%), Gaps = 38/534 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R LY +T I Y NA PH+GH Y ++ADV R+ + G++ +TGTDEHG K+ +AA Sbjct: 34 RPHLY-TTPIFYVNASPHLGHVYSALLADVQHRYSAMCGIESRLSTGTDEHGMKVQQAAS 92 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 + F S FR++ D LDISY DF+RTTE RH + W + ++G IYKG Sbjct: 93 ALSLDPHTFCSSVSLQFRNIFDDLDISYTDFVRTTEPRHKEAVSRFWMTLEERGYIYKGT 152 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQ------YYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY DEA+ ++ + + D + + H V W+ EE Y FRLS+ + LL Sbjct: 153 YEGWYCTSDEAFLSEGQTAERIDSEGNKIRVSLESGHQ-VHWVSEENYMFRLSSLRPALL 211 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDAL 235 ++ ++ P P R V +++ L DLS+SR+ WGI +P D +++YVW+DAL Sbjct: 212 NWLQTEPVHPAPFLRL--VHHWLEEELPDLSVSRQRSRLSWGIPVPSDSSHVIYVWLDAL 269 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYLT GY P+ A + P+ H++GKDILRFHAIYWPAFL++A L P K+ H Sbjct: 270 VNYLTAAGY---PNLQLAPWGPST-HLLGKDILRFHAIYWPAFLIAAGLSPPHKLLVHSH 325 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +G K+SKSL NV+DP + I D LRY+L+R A +D + + +N++LA Sbjct: 326 WTSEGTKMSKSLKNVVDPADCIRRYTKDGLRYYLLRHGAPERDCDFTHRTARTLLNSELA 385 Query: 356 NGIGNLVSRSVSMILK--------DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 + +G L++R + + YD P A + + +L+ + E+ + ++ Sbjct: 386 DALGGLLNRCTAPAINPMQHFPKFHYDSF---PSAAHDQLQGVLANLQNLPAEVDQWVKK 442 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQA 464 +H+AL + + V + +F +Q PW+L++ A+ +V+YVT+E +R A LLQ Sbjct: 443 FQVHKALECIDACVRRSNAFFQSQAPWKLQRGVEKEAALRDSVIYVTLESLRLYATLLQP 502 Query: 465 FVPKLANKIFDILFVADENRCFQS----LDQRLKPGFMLHKTFDP----IFPRF 510 VP LA + L V E R + R + + +T P +FPR Sbjct: 503 AVPGLATAALERLGVPLEMRTLKGNTFLAATRGESCYFQGQTLGPEKGLLFPRL 556 >gi|86739206|ref|YP_479606.1| methionyl-tRNA synthetase [Frankia sp. CcI3] gi|86566068|gb|ABD09877.1| methionyl-tRNA synthetase [Frankia sp. CcI3] Length = 521 Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 183/481 (38%), Positives = 270/481 (56%), Gaps = 18/481 (3%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + +++TAI Y N +PH+GHA E+I D AR R G +V F TGTD++ K +AA+ Sbjct: 15 RYFVTTAIPYVNGKPHVGHALELIETDAYARHLRQRGHEVRFQTGTDDNALKNVQAAEAE 74 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T +V++ + F + L +S+DDFI+T T+ RH LW +D+GD Y+ Y Sbjct: 75 GITPAEYVERVATGFVGLRGPLGLSFDDFIKTSTDPRHRPGVEKLWSACADRGDFYRKTY 134 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYESH 183 +G Y + E +Y DE+ G +H V +EE +FFRL YQD+L + + Sbjct: 135 AGLYCVGCELFYQPDELVDG-----RCPEHGTVPDLVEESNWFFRLGRYQDQLHALISTD 189 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 I P R+ EV+SF+++GL+D S SR + WGI +P DP+ ++YVW DAL NY+T Sbjct: 190 RLRIEPAARKREVLSFIEAGLEDFSASRSMSRARGWGIPVPGDPEQVIYVWFDALGNYIT 249 Query: 241 TTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 GY ++ D + + AD +HVIGK I+RFHA+YWPA LLSA + LP +F H ++ Sbjct: 250 APGYGNDDDSFQYWWNDADRRVHVIGKGIIRFHAVYWPAMLLSAGVRLPDTIFVHEYLTA 309 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 KISKS GN DP +++ DALR++++R++A D Y + L R N DLAN I Sbjct: 310 DSMKISKSAGNAEDPADIVAAFNTDALRWWMLRDVARAGDTDYTTERLVTRANEDLANNI 369 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNLV+R+VSM+ + DG+IP + + +V + I + RA + Sbjct: 370 GNLVNRTVSMVKRYRDGLIPPLALDNPAAAKLRAVRDETPRTIDDAFAAFDFRRAAEVIT 429 Query: 419 SLVSEVDRYFDAQKPWELKK------TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + E +RY +A +PWEL K + D VL V R+LA L F+P A + Sbjct: 430 RIGDEGNRYVEAARPWELAKAERKEGASRDALDAVLAELVATCRELAEHLAPFLPDSAPR 489 Query: 473 I 473 I Sbjct: 490 I 490 >gi|194745961|ref|XP_001955453.1| GF18774 [Drosophila ananassae] gi|190628490|gb|EDV44014.1| GF18774 [Drosophila ananassae] Length = 568 Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 178/505 (35%), Positives = 273/505 (54%), Gaps = 29/505 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAAQNA 65 +++T I Y NA PHIGH Y +IAD R+ RL + V TGTDEHG KI +AA Sbjct: 21 FVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLKYPERKVRLCTGTDEHGTKIQQAAALH 80 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 V + DQ S +R++ +I DDFIRTTE+RH W+ ++ +G IY YS Sbjct: 81 KVPVATYCDQISERYREVFQNANILQDDFIRTTEERHKRAVAHFWRTLNSRGHIYSAAYS 140 Query: 126 GWYSLRDEAYYNDDEV-YKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY + DE + D ++ A G Y+ + +PV+W EE Y FRLS +QD ++ + + Sbjct: 141 GWYCVSDETFLTDSQLKLDEATGARYSLESGHPVEWTEETNYMFRLSKFQDDVIHWVKQE 200 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241 I P + ++ + L D+S+SR + W I +PDD +YVW+DAL NYL+ Sbjct: 201 AR-IRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDSSQTVYVWLDALVNYLSA 259 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY PD + FWP +IGKDIL+FH IYWPAFL++A L P +++ H G+ Sbjct: 260 LGY---PDEEYSAFWPPAQQIIGKDILKFHGIYWPAFLIAAGLQPPGQLYVHSHWTVDGQ 316 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS NV++P++ E+ ++ LRYFL+RE DG Y + +N++LA+ +GNL Sbjct: 317 KMSKSKQNVVNPVQAAEQYTMEGLRYFLLREGVAHSDGNYSHVKALRILNSELADTLGNL 376 Query: 362 VSRSVSMIL-----------KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410 +SR+ + L + ++ + A ES+L + R Q N Sbjct: 377 LSRACAKTLNPRQIYPSAQAEHLAEILGSLDAAKRLQESLLQLSERCAQHYESNH----F 432 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFV 466 H ++ + + +F+ +PWELKK +N R T++ +T++ +R I+LQ + Sbjct: 433 HLVADTAMATLHAANNFFETSRPWELKKGAAGSNEPRLETIIAMTMDALRLCGIVLQPII 492 Query: 467 PKLANKIFDILFVADENRCFQSLDQ 491 P+LA ++ D L V R + L + Sbjct: 493 PQLATRLLDKLSVPATQRGWNYLAE 517 >gi|119181183|ref|XP_001241833.1| hypothetical protein CIMG_05729 [Coccidioides immitis RS] Length = 581 Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 183/518 (35%), Positives = 271/518 (52%), Gaps = 47/518 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61 +R+ Y++T I Y NA PH+GH Y +++AD+L R+ L G D TGTDEHG KI +A Sbjct: 47 QRKPYYVTTPIFYVNASPHVGHLYTLVLADILKRWQVLLGNNDAQLLTGTDEHGIKIQQA 106 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A + G+ DQN + F+D+A ++ +D FIRTT+ H D + W+ + +G IY Sbjct: 107 AASHGLEPIKLCDQNCQTFKDLAQKANVQHDHFIRTTDPEHRDAVQYFWEMLDHRGYIYT 166 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDK 175 + GWYS+ DE +Y + V+ D V+W E Y FRLSA++D+ Sbjct: 167 AKHEGWYSVSDETFYPSNAVHATLDPATGRKIMSTIETGKEVEWSSETNYHFRLSAFKDR 226 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWID 233 LL +Y +P FI P + ++ V SGL DLS+SR + WGI++P D +YVW+D Sbjct: 227 LLDFYRENPTFIRPKRYMDNIVQSVSSGLTDLSISRPVQRLTWGIRVPGDDTQTIYVWLD 286 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVI------------GKDI-LRFHAIYWPAFLL 280 AL NYLT GY P WPA++HV+ G D+ RFH +YWPAFL+ Sbjct: 287 ALINYLTYAGYPFTPGKENQSIWPANVHVVFARSSQKADACPGADLDARFHCVYWPAFLM 346 Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + +LPLP++V SH EK+SKS GNV++P+ + GVD LR++L + D Sbjct: 347 ALDLPLPRQVLSHAHWTIGREKMSKSTGNVVNPMYALARFGVDPLRFYLAHDGGLSDDAD 406 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDESILS 392 Y+ + +R L G+GNL SR V I +G P P +E+D Sbjct: 407 YENAFVTERYKKTLQWGVGNLTSRLVRSKKWNVRRSIEWGVEGRFPPP---SEADRKHQQ 463 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + + R M + +A+ V+ ++ E + T P S V+Y T Sbjct: 464 LLEGIRNVTRSWMDDLNPRKAVESVVGIIHESE------------NTEPTELSRVIYNTA 511 Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQS 488 E +R ILLQ F+P+ + ++ D+L VA E R F++ Sbjct: 512 ESLRIAGILLQPFMPEKSARLLDMLGVAGDPEKRSFEA 549 >gi|195570957|ref|XP_002103470.1| GD20436 [Drosophila simulans] gi|194199397|gb|EDX12973.1| GD20436 [Drosophila simulans] Length = 582 Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 189/529 (35%), Positives = 279/529 (52%), Gaps = 42/529 (7%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQNA 65 Y++T I Y NA PHIGH Y +IAD R+ RL LDV TGTDEHG KI +AA Sbjct: 21 YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPELDVRLCTGTDEHGTKIQQAASLH 80 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV + D S+ +R++ I DDFIRTTE RH W+ + +G IY YS Sbjct: 81 GVPVAKYCDDISQRYREVFRSASIQQDDFIRTTEDRHKRAVANFWRTLYTRGHIYSAAYS 140 Query: 126 GWYSLRDEAYYNDDEV-YKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY + DE + D ++ A G Y+ + +PV+W EE Y FRLS +QD + + ++ Sbjct: 141 GWYCVSDETFLTDSQLRLDEATGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKTE 200 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241 I P + ++ + L D+S+SR + W I +PDD +YVW+DAL NYL++ Sbjct: 201 AR-IRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDDSQTVYVWLDALVNYLSS 259 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY PD + WP VIGKDIL+FH IYWPAFLL+A L P +++ H G+ Sbjct: 260 VGY---PDEKFSVHWPPAQQVIGKDILKFHGIYWPAFLLAAGLEPPGQLYVHSHWTVDGQ 316 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS NV+DP++ ++ ++ LRYFL+RE DG Y ++ +N++LA+ +GNL Sbjct: 317 KMSKSKHNVVDPLQAAQQYTMEGLRYFLLREGVAHSDGNYSHVKAQRILNSELADTLGNL 376 Query: 362 VSRSVSMILKDYDGMI-PTPGAFTESD------------ESILSVCSRVLQEIRENMQNQ 408 +SR+ + L G I P+ A +D +S+L + R N Sbjct: 377 LSRASAKSLN--PGQIYPSTSAEHLADLLRSLDAAKRLQDSLLQLSERCASHYECNH--- 431 Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQA 464 H ++ + + +F++ KPW LK PD R T++ +T++ +R I+LQ Sbjct: 432 -FHLVADTTMAALHAANNFFESSKPWTLKAGAPDGNQARLETIIAMTMDALRLSGIVLQP 490 Query: 465 FVPKLANKIFDILFVADENRCFQSLDQRLK---------PGFMLHKTFD 504 +P+LAN++ D L V R + L + PGF + D Sbjct: 491 IIPQLANRLLDKLSVPTAQRGWNYLAESFATSPNSSNSHPGFGESRQLD 539 >gi|195329048|ref|XP_002031223.1| GM25865 [Drosophila sechellia] gi|194120166|gb|EDW42209.1| GM25865 [Drosophila sechellia] Length = 582 Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 189/529 (35%), Positives = 278/529 (52%), Gaps = 42/529 (7%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQNA 65 Y++T I Y NA PHIGH Y +IAD R+ RL LDV TGTDEHG KI +AA Sbjct: 21 YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPELDVRLCTGTDEHGTKIQQAASLH 80 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV + D S+ +R++ I DDFIRTTE RH W+ + +G IY YS Sbjct: 81 GVPVAKYCDDISQRYREVFSSASIQQDDFIRTTEDRHKRAVANFWRTLYTRGHIYSAAYS 140 Query: 126 GWYSLRDEAYYNDDEV-YKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY + DE + D ++ A G Y+ + +PV+W EE Y FRLS +QD + + ++ Sbjct: 141 GWYCVSDETFLTDSQLRLDEATGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKTE 200 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241 I P + ++ + L D+S+SR + W I +PDD +YVW+DAL NYL++ Sbjct: 201 AR-IRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDDSQTVYVWLDALVNYLSS 259 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY PD + WP VIGKDIL+FH IYWPAFLL+A L P +++ H G+ Sbjct: 260 VGY---PDEKFSVHWPPAQQVIGKDILKFHGIYWPAFLLAAGLEPPGQLYVHSHWTVDGQ 316 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS NV+DP++ ++ ++ LRYFL+RE DG Y ++ +N++LA+ +GNL Sbjct: 317 KMSKSKHNVVDPLKAAQQYTMEGLRYFLLREGVAHSDGNYSHVKAQRILNSELADTLGNL 376 Query: 362 VSRSVSMILKDYDGMI-PTPGAFTESD------------ESILSVCSRVLQEIRENMQNQ 408 +SR+ + L G I P+ A +D +S+L + R N Sbjct: 377 LSRASAKSLN--PGQIYPSTSAEHLADLLRSLDAAKRLQDSLLQLSERCASHYECNH--- 431 Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQA 464 H ++ + + +F++ KPW LK PD R T++ +T+ +R I+LQ Sbjct: 432 -FHLVADTTMAALHAANNFFESSKPWTLKAGAPDGNQARLETIIAMTMNALRLSGIVLQP 490 Query: 465 FVPKLANKIFDILFVADENRCFQSLDQRL---------KPGFMLHKTFD 504 +P+LAN++ D L V R + L + PGF + D Sbjct: 491 IIPQLANRLLDKLSVPTAQRGWNYLAESFATSPNSSNSNPGFGESRQLD 539 >gi|198282147|ref|NP_001092441.1| methionyl-tRNA synthetase, mitochondrial precursor [Bos taurus] gi|182689574|sp|A6H7E1|SYMM_BOVIN RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName: Full=Methionine--tRNA ligase 2; AltName: Full=Mitochondrial methionine--tRNA ligase; Short=MtMetRS; Flags: Precursor gi|148878169|gb|AAI46212.1| MARS2 protein [Bos taurus] gi|296490436|gb|DAA32549.1| methionyl-tRNA synthetase, mitochondrial precursor [Bos taurus] Length = 593 Score = 323 bits (828), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 182/512 (35%), Positives = 269/512 (52%), Gaps = 30/512 (5%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKA 61 + Y +T I Y NA PHIGH Y ++AD L R HRL F+TGTDEHG KI +A Sbjct: 43 SRAYFTTPIFYVNAAPHIGHLYSALLADALCRHHRLRVPSDAATGFSTGTDEHGLKIQQA 102 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A AG+ D+ S F+ + DIS DFIRTTE RH + W + +G +YK Sbjct: 103 AAAAGLAPSELCDRVSAQFQQLFREADISSTDFIRTTEARHRIAVQHFWGMLKSRGLLYK 162 Query: 122 GCYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKL 176 G Y GWY DE + + +V + G G +PV W +EE Y FRLS +++ L Sbjct: 163 GLYEGWYCASDECFLPEAKVTRQPGPSGDLCPVSLESGHPVSWTKEENYIFRLSQFREPL 222 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDA 234 + P+ I P + V+ +++ L DLS+SR++ WGI +P D +YVW+DA Sbjct: 223 QQWLRGDPQAITPEPFHHTVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDA 282 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L NYLT GY PD +WP H+IGKDIL+FHAIYWPA LL A + P +++ H Sbjct: 283 LVNYLTVVGY---PDAEFKSWWPNTSHIIGKDILKFHAIYWPALLLGAGMSPPHRIYVHS 339 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 G+K+SKSLGNV+DP ++ VD RYFL+R+ D Y + + K ++++L Sbjct: 340 HWTVCGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPSWDCDYYDEKVVKLLDSEL 399 Query: 355 ANGIGNLVSRS--------------VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 A+ +G L++R + G++ G D +++S + + ++ Sbjct: 400 ADALGGLLNRCTANKINPSGIYPAFCATCFPSEPGLVGPSGRAQAEDYALVSAVATLPKQ 459 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457 + ++ N I++AL V S V + + + PW+L +P A TVL+V +E +R Sbjct: 460 VADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRV 519 Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489 LLQ P LA+++ L V+ R L Sbjct: 520 FGTLLQPVTPSLADRLLSRLGVSSTERSLGEL 551 >gi|110331789|gb|ABG67000.1| methionine-tRNA synthetase 2 precursor [Bos taurus] Length = 589 Score = 323 bits (828), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 182/512 (35%), Positives = 269/512 (52%), Gaps = 30/512 (5%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKA 61 + Y +T I Y NA PHIGH Y ++AD L R HRL F+TGTDEHG KI +A Sbjct: 39 SRAYFTTPIFYVNAAPHIGHLYSALLADALCRHHRLRVPSDAATGFSTGTDEHGLKIQQA 98 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A AG+ D+ S F+ + DIS DFIRTTE RH + W + +G +YK Sbjct: 99 AAAAGLAPSELCDRVSAQFQQLFREADISSTDFIRTTEARHRIAVQHFWGMLKSRGLLYK 158 Query: 122 GCYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKL 176 G Y GWY DE + + +V + G G +PV W +EE Y FRLS +++ L Sbjct: 159 GLYEGWYCASDECFLPEAKVTRQPGPSGDLCPVSLESGHPVSWTKEENYIFRLSQFREPL 218 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDA 234 + P+ I P + V+ +++ L DLS+SR++ WGI +P D +YVW+DA Sbjct: 219 QQWLRGDPQAITPEPFHHTVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDA 278 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L NYLT GY PD +WP H+IGKDIL+FHAIYWPA LL A + P +++ H Sbjct: 279 LVNYLTVVGY---PDAEFKSWWPNTSHIIGKDILKFHAIYWPALLLGAGMSPPHRIYVHS 335 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 G+K+SKSLGNV+DP ++ VD RYFL+R+ D Y + + K ++++L Sbjct: 336 HWTVCGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPSWDCDYYDEKVVKLLDSEL 395 Query: 355 ANGIGNLVSRS--------------VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 A+ +G L++R + G++ G D +++S + + ++ Sbjct: 396 ADALGGLLNRCTANKINPSGIYPAFCATCFPSEPGLVGPSGRAQAEDYALVSAVATLPKQ 455 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457 + ++ N I++AL V S V + + + PW+L +P A TVL+V +E +R Sbjct: 456 VADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRV 515 Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489 LLQ P LA+++ L V+ R L Sbjct: 516 FGTLLQPVTPSLADRLLSRLGVSSTERSLGEL 547 >gi|47459150|ref|YP_016012.1| methionyl-tRNA synthetase [Mycoplasma mobile 163K] gi|47458479|gb|AAT27801.1| methionyl-tRNA synthetase [Mycoplasma mobile 163K] Length = 509 Score = 322 bits (826), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 180/511 (35%), Positives = 289/511 (56%), Gaps = 11/511 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YIST I YPN H+GH Y M IA + + +L G L TG+DEHGQKI ++A+ Sbjct: 2 KKFYISTPIFYPNGDLHLGHLYSMSIAWAIRNYKKLKGYQTLLLTGSDEHGQKIMQSAEK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 ++ K FVDQ + F+ DI YD F+RTT+K+H+ + K+++ IYK Y Sbjct: 62 NNLSPKNFVDQQAEKFKSFWKKFDIEYDVFVRTTDKKHNSVIEKILTKLNENNFIYKSFY 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESH 183 G YS+ DE + + K +G++++ N ++ ++EE YF ++S +Q+ L Y E + Sbjct: 122 EGLYSISDEEFLTKTQA-KEVNGKFFHPVSNHELKIVKEESYFLKISQFQNWLKKYLEDY 180 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P FI + NE+ S F+ L+DLS+SR +FDWGIK D ++I YVW+DAL +YL+ Sbjct: 181 PNFISSQKVINELKSTFLNEKLEDLSISRNSFDWGIKFSFDNKHIAYVWVDALFSYLSPL 240 Query: 243 GYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 N + + W D +HV+GK+I RFH IYWP L NLPLP K+ SHG+++ Sbjct: 241 ELFLNQEKFNSS-WNDDVEKIHVVGKEITRFHGIYWPIMLKMLNLPLPNKILSHGWLITS 299 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GN+++P++++EE + ++ +L+ + +DG +DK+ +K N+ LAN G Sbjct: 300 TGKMSKSKGNIVNPLDLLEEFDSETIKLYLLSAFSINRDGVFDKENIKFFYNSFLANNYG 359 Query: 360 NLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 NL+SR S+ +++ I + + D SIL + ++ N N I +A+ +I Sbjct: 360 NLISRVSSLFSQNFSSKISWDQNSLDKIDYSILDKIEKSKEDFMSNFDNFEIDKAVEILI 419 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 L +E++ Y D K W L K + R +T+L + + I ++ L+ F+P KI F Sbjct: 420 KLGNELNGYVDLTKAW-LLKDDKKRLATILLILINGIYAMSAYLKIFMPLKIEKIERDFF 478 Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 +N ++++ K + K + IF R Sbjct: 479 --QQNASLENIENWKKFDDIFIKKIESIFNR 507 >gi|146318899|ref|YP_001198611.1| methionyl-tRNA synthetase [Streptococcus suis 05ZYH33] gi|145689705|gb|ABP90211.1| Methionyl-tRNA synthetase [Streptococcus suis 05ZYH33] Length = 602 Score = 322 bits (826), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 173/460 (37%), Positives = 276/460 (60%), Gaps = 21/460 (4%) Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + +VD + +++ ++LDISYD FIRTT+ H + +++K+ + DIY G YSG Sbjct: 1 MTPQAYVDGMAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSG 60 Query: 127 WYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 WYS+ DE ++ + +EV++ +G+ + V W+ EE YF RLS YQDKL+ ++ Sbjct: 61 WYSVSDEEFFTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKLVEFF 120 Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 +HP+FI P R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL NY Sbjct: 121 NAHPDFIQPAGRLNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDALLNYA 180 Query: 240 TTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 T GY + KFW + H++GKDILRFH+IYWP L+ ++ LP ++ +HG+ + Sbjct: 181 TALGYGQEETVNYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDRLVAHGWFVM 240 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N +LAN + Sbjct: 241 KDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVDRINYELANDL 300 Query: 359 GNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 GNL++R+V+MI K + G +PT A T+ D + +V + L + M+ RAL V Sbjct: 301 GNLLNRTVAMINKYFGGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPRALEAV 360 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +++S ++Y D PW L K DR A+ + ++T +R +A L+Q F+ +N I Sbjct: 361 WNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAG-LRVVAHLIQPFMMTTSNAIM 419 Query: 475 DILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + L + EN F L G + PIFPR Sbjct: 420 EQLGLGTAFDLENLDFAG----LPAGLTVVAKGTPIFPRL 455 >gi|164663379|ref|XP_001732811.1| hypothetical protein MGL_0586 [Malassezia globosa CBS 7966] gi|159106714|gb|EDP45597.1| hypothetical protein MGL_0586 [Malassezia globosa CBS 7966] Length = 532 Score = 322 bits (825), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 179/514 (34%), Positives = 268/514 (52%), Gaps = 35/514 (6%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--------------DGLDVLFTTG 50 + Y++T I Y NA+PHIGH + ++ADVL R+ L + L TTG Sbjct: 3 KPFYVTTPIFYVNAEPHIGHLHSSVMADVLRRYAELRYRGWSTYGTIPNDETTRALMTTG 62 Query: 51 TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILW 110 TDEHG KI + A+ GV + D+ S+ F +A DI FIRTTE H + +W Sbjct: 63 TDEHGLKIQRVAETMGVEPRALCDRVSQRFEALARAADIEPTRFIRTTEDTHIAAVQHVW 122 Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEV--YKGADGQYYNAQHNP------VQWMEE 162 K++ G IY G + GWY++ DEA+Y + ++ K G + V+W E Sbjct: 123 NKLACHGHIYLGEHQGWYAVSDEAFYPESQICATKQQSGSSSETVYTSIETGQRVEWTTE 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKI 220 Y FRLSA+Q LL + E++ E I P + V++ V+SGL+DLS+SR WGI + Sbjct: 183 TNYKFRLSAFQQPLLDWLENNREVIQPSNMYDHVLAEVRSGLQDLSISRLRSRLTWGIPV 242 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280 P DPQ+ MYVW+DAL NY+T GY G WPAD+H++GKDI+RFHAIYWPAFL+ Sbjct: 243 PGDPQHTMYVWMDALVNYMTALGYPHMQPG-----WPADVHIVGKDIVRFHAIYWPAFLM 297 Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDG 339 +A LPLP+ + +H K+SKS GN I+P + GVD +RY+L+R G D Sbjct: 298 AAGLPLPRTIVAHSHWTVNKAKMSKSKGNAINPFHALHTYGVDTMRYYLMRIGGHIGTDA 357 Query: 340 FYDKDGLKKRVNADLANGIGNLVSR----SVSMILKDYDGMIPTPGAFTESDESILSVCS 395 Y L++ L +GNL+SR + L ++ P + E+++ ++ C+ Sbjct: 358 DYAPALLEEHKRKFLQGQLGNLLSRVLAPKIQARLTGTGLLLARPTHWAEAEKRLIHACT 417 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 + +MQ +A+ V +++ + PW T D ++ + E + Sbjct: 418 HLPPTFDAHMQAYEPSKAIQAVFDVIALTNELVQHSAPWS-TDTPLDAVHRCVFASCEAL 476 Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489 R +LLQ +P+ + + L V R + SL Sbjct: 477 RLCGVLLQPVMPRAMTTLLNELQVPASQRTWDSL 510 >gi|116070585|ref|ZP_01467854.1| methionine--tRNA ligase [Synechococcus sp. BL107] gi|116065990|gb|EAU71747.1| methionine--tRNA ligase [Synechococcus sp. BL107] Length = 514 Score = 322 bits (825), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 182/478 (38%), Positives = 263/478 (55%), Gaps = 17/478 (3%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y N +PH+G Y + D LARF RL DVLF TG DEHGQKI + A+ ++ Sbjct: 5 LTTPLYYVNDKPHLGSTYTTLACDALARFKRLTQNDVLFITGVDEHGQKIQRTAEQKNIS 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 DQ S ++D+ DIS D F+RTT RH + ++++ GDI G +GWY Sbjct: 65 PMAHCDQVSERYQDLWSRWDISQDRFVRTTNPRHLELVEQFYERVKASGDIVTGRQTGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + +D + D Q Q ++W +EE FFRLS YQ ++ ++ +FI Sbjct: 125 CVGCEEFKDDPD--DAVDPQCPIHQKT-LEWRDEENLFFRLSRYQREIEELI-ANDDFIA 180 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P RR EV +FV GL+D S+SR WGI +P P + YVW DAL YLT LD Sbjct: 181 PASRRQEVRNFVARGLRDFSISRVNVSWGIPVPGHPGHTFYVWFDALLGYLT--ALLD-- 236 Query: 249 DGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 DG WPA +HVIGKDILRFHA++WPA L+SA L LPK+VF HGF+ +G+ Sbjct: 237 DGGSVDLDRLADSGWPASVHVIGKDILRFHAVFWPAMLISAGLSLPKRVFGHGFLTREGQ 296 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+ KSLGNV+DP ++E+ G DA+R++L+R+I G DG + + VN DLAN IGNL Sbjct: 297 KMGKSLGNVLDPELLLEKCGTDAVRWYLLRDIQFGDDGDFQQQRFSDLVNNDLANTIGNL 356 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R+ SM K +D +P + + + + + M A ++ L Sbjct: 357 LNRTSSMARKWFDDSVPPHSVESHINHPLALKAQATIATVMRCMPELGFKAASESILQLA 416 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + + PW K + S LYV +E R + +LL +P L+++I + L Sbjct: 417 IAANGHLNDTAPWSRMKQQGEEQSVANDLYVVLESTRIVGLLLAPLLPDLSSRILNQL 474 >gi|33861424|ref|NP_892985.1| methionyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33634001|emb|CAE19326.1| Methionyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 511 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 179/502 (35%), Positives = 285/502 (56%), Gaps = 12/502 (2%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+T + Y N +PH+G Y +I D +AR+ RL G DV+F TG DEHG KI + A+N GV Sbjct: 5 ITTPLYYVNDKPHLGSIYTTLICDSIARYKRLTGADVIFITGVDEHGLKIQRTAKNKGVE 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D+ S F+ DI+++ F+RT+ ++H + + ++ DIY G GWY Sbjct: 65 PQFHCDEISDIFKQNWKNWDITHNKFVRTSSQKHEYIVKEFYNRVKKSDDIYMGVQKGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + ++ + + ++W EE FF+LS YQ ++ + P FI Sbjct: 125 CVGCEEFKDNPD---NSPTHKCPIHQKTLEWKNEENLFFKLSKYQSQIEELIK-EPAFIQ 180 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDN 247 P ERRNE+I+FV GLKD S+SR WGI +PD + YVW DAL Y++ + Sbjct: 181 PKERRNEIINFVSKGLKDFSISRTNVSWGISVPDIDNHTFYVWFDALLGYVSAISLDMKE 240 Query: 248 P--DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 P D S WPAD+H+IGKDILRFHA+YWPA L+SA + +PKKV+ HGF+ +G+K+ K Sbjct: 241 PSLDESIDNGWPADIHLIGKDILRFHAVYWPAMLISAGMKVPKKVYGHGFLTREGQKMGK 300 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGNV+DP ++ + G +A+R++L+++I G+DG + +N DLAN IGNL++R+ Sbjct: 301 SLGNVLDPDILLSKYGKEAVRWYLLKDITLGQDGDFQNKRFVDIINNDLANTIGNLLNRT 360 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 SM K +D +P+ ++ D S+ + ++ + + + A ++SL + Sbjct: 361 SSMSRKWFDNRVPSNEMLSK-DNSLELYAKKTVENYFRHFNSYELDLAANVILSLAINTN 419 Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 Y + ++PW L K N S ++Y +E R + +LL +P L++KI L + Sbjct: 420 LYLNEKQPWTLIKDEKNIPLVSNIIYNVLESTRIVGLLLLPILPNLSSKIDQQLGLLYNE 479 Query: 484 RCFQSLDQRLKPGFMLHKTFDP 505 + S ++L G ++H++ P Sbjct: 480 KG--SWKKQLDWGKLIHESILP 499 >gi|195109831|ref|XP_001999485.1| GI24536 [Drosophila mojavensis] gi|193916079|gb|EDW14946.1| GI24536 [Drosophila mojavensis] Length = 579 Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 180/513 (35%), Positives = 270/513 (52%), Gaps = 31/513 (6%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKI 58 ++ R Y++T I Y NA PHIGH Y +IAD R+HRL D V TGTDEHG KI Sbjct: 14 VRCRSSHYVTTPIFYVNAAPHIGHLYSAVIADAHCRYHRLRYPDTEVRLCTGTDEHGTKI 73 Query: 59 AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 +AA V + D+ S +R++ I YDDFIRTTE+RH W ++ +G Sbjct: 74 QQAAAAHEVPVGQYCDEISARYREVFKAARIEYDDFIRTTEQRHKLAVSDFWHRLQSRGY 133 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY--KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 IY YSGWY + DE + D ++ + + +Y +PV+W EE Y FRLS +QD + Sbjct: 134 IYSAAYSGWYCVSDETFLTDSQLRLDEASGARYSLESGHPVEWTEETNYMFRLSQFQDDV 193 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDA 234 + + I P + ++ + L D+S+SR W I +P+D +YVW+DA Sbjct: 194 RHWVQQEAR-IRPAKFEKILLDTLSEPLPDVSISRPANRVHWAIPVPNDETQTVYVWLDA 252 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L NYL++ GY P+ WP VIGKDIL+FH IYWPAFLL+A L P+++ H Sbjct: 253 LINYLSSLGY---PNEQYLAHWPPAQQVIGKDILKFHGIYWPAFLLAAGLEPPRQLHVHS 309 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 G+K+SKS NV+DP+E ++ ++ LRYFL+RE DG + + +N++L Sbjct: 310 HWTVDGQKMSKSKHNVVDPVEAAKQYTMEGLRYFLLREGVAHSDGNFSHVKALRILNSEL 369 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPG------------AFTESDESILSVCSRVLQEIR 402 A+ +GNL+SR+ + L + M P P A E++ + R Q Sbjct: 370 ADTLGNLLSRACAKSLNPHQ-MYPEPHVEHLSQLLQHLDAGKRLQEALFHLAGRCEQHYE 428 Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK----KTNPDRASTVLYVTVEVIRQL 458 N H I+ + + +F+ KPWELK N R T++ +T++ +R Sbjct: 429 GNH----FHLVADTAIAALHAANNFFECAKPWELKAGGSSPNAQRLQTIIAMTMDALRLC 484 Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491 I+LQ +P+L +++ D L V R ++ L + Sbjct: 485 GIVLQPMMPQLTSRLLDKLNVPIAQRSWRHLGE 517 >gi|330947142|ref|XP_003306845.1| hypothetical protein PTT_20116 [Pyrenophora teres f. teres 0-1] gi|311315437|gb|EFQ85056.1| hypothetical protein PTT_20116 [Pyrenophora teres f. teres 0-1] Length = 513 Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 176/484 (36%), Positives = 259/484 (53%), Gaps = 28/484 (5%) Query: 28 MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87 M++ DV+ R+H L G L TGTDEHG K+ +AA AG+ K F D+ + F+++A Sbjct: 1 MVLTDVVKRWHLLKGEKALLCTGTDEHGLKVQRAAAKAGIDPKSFCDKGAEIFKELARKA 60 Query: 88 DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY----- 142 +I+ D F+RTT++ H + + W + +KG IY+ + GWYS+ DE +Y V Sbjct: 61 EITNDHFVRTTDREHKEAVQYAWFLLQEKGLIYEQKHEGWYSVTDECFYPQSGVQPYLDP 120 Query: 143 -KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201 G + V+W EE Y FRLSA++DKLL +Y+++PE+I+P R N+V+ V+ Sbjct: 121 PTGRKIMTSIETGSEVEWSSEENYHFRLSAFRDKLLEFYKNNPEWIVPETRMNDVVQAVE 180 Query: 202 SGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 SGL+DLS+SR WGI++P D +YVW+DAL NY T GY P + WPAD Sbjct: 181 SGLEDLSISRPYDRLTWGIRVPGDDSQTIYVWLDALMNYATKAGYPWTPGREQEGGWPAD 240 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 HVIGKDI+RFH IYWPAFL++ LPLPKK+ +H G K+SKS G V+DP I+ Sbjct: 241 CHVIGKDIVRFHCIYWPAFLMALGLPLPKKILTHAHWTLGGSKMSKSTGKVVDPFLAIDR 300 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 G D +R+++VRE D YD + + + L +GNL SR V G I Sbjct: 301 FGSDVMRFYMVREGGIRDDASYDNARIIMQYDKFLRQNLGNLASRVVRGKGWSVRGAIER 360 Query: 380 PGAFTESD-----------ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428 G + D S+ ++ S E RA+ + + + +F Sbjct: 361 IGGRSAEDWEEGPGSKFRKNSLATIAS----ETNAAFDAYDPRRAVFGITEFIRGTNAFF 416 Query: 429 DAQKPWE----LKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 PW+ P + ++Y++ E +R ILLQ ++P AN++ D L V + Sbjct: 417 TMSAPWDKILNFGPGEPGEDVDKIIYLSAEALRIAGILLQPYMPNKANRLLDQLGVHRDR 476 Query: 484 RCFQ 487 R F+ Sbjct: 477 RTFE 480 >gi|254525465|ref|ZP_05137517.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202] gi|221536889|gb|EEE39342.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202] Length = 514 Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 179/457 (39%), Positives = 255/457 (55%), Gaps = 18/457 (3%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+T + Y N +PH+G Y II D +AR+ RL G DV+F TG DEHG KI + A G+ Sbjct: 5 ITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEDVIFITGVDEHGLKIQRTANEKGIE 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 K D S+ F + +IS+D FIRT+ K H +K++ DIY G GWY Sbjct: 65 PKSHCDAISKVFNNNWKDWNISFDKFIRTSSKNHEFVVNEFYKRVKASDDIYMGVQKGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 + E + ++ E Y H ++W EE FFRLS YQ K + + P FI Sbjct: 125 CVGCEEFKDNPE----NSSTYKCPIHQKNLEWKNEENLFFRLSKYQ-KEIEKIINEPSFI 179 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT------T 241 PIER+NE+I+FV GLKD S+SR WGI +P + YVW DAL Y++ T Sbjct: 180 EPIERKNEIINFVSRGLKDFSISRTNVTWGIPVPGYDNHTFYVWFDALLGYVSAISSDAT 239 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 L N S K WPAD+H+IGKDILRFHA+YWPA L+SA + +PKKVF HGF+ +G+ Sbjct: 240 EHLLKN---SINKGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQ 296 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+ KSLGNV+DP ++ + G D +R++L+++I+ G DG + +N DLAN IGNL Sbjct: 297 KMGKSLGNVLDPDLLLTKYGNDPVRWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNL 356 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R+ SM K +D +P S+ + + ++ N N + A +V+SL Sbjct: 357 LNRTSSMSRKWFDNKVPNNEKIL-SENKLENFAQIAVKNYIYNFDNYKLDLAANEVLSLA 415 Query: 422 SEVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIR 456 + Y + +PW L +K N ++Y +E R Sbjct: 416 INTNLYLNDNQPWLLIKEKDNLPLVKEIIYNVLESTR 452 >gi|123966181|ref|YP_001011262.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515] gi|123200547|gb|ABM72155.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515] Length = 511 Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 170/453 (37%), Positives = 256/453 (56%), Gaps = 10/453 (2%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+T + Y N +PH+G Y +I D +ARF RL G +V+F TG DEHG KI + A N GV Sbjct: 5 ITTPLYYVNDKPHLGSIYTTLICDSIARFKRLSGDNVIFITGVDEHGLKIQRTASNKGVD 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D+ S F+ DI+ + F+RT+ + H + ++ GDIY G GWY Sbjct: 65 PQSHCDEISDIFKQNWKSWDITNNKFVRTSSQNHESIVNEFYNRVKASGDIYMGVQKGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + + E + Q N ++W EE FFRLS YQ ++ + P FI Sbjct: 125 CVGCEEFKENPENLSSYKCPIH--QKN-LEWKNEENLFFRLSKYQSQIEELI-NEPSFIY 180 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDN 247 P ERRNE+I+FV GLKD S+SR WGI +PD + YVW DAL Y++ + + Sbjct: 181 PKERRNEIINFVSKGLKDFSVSRTNVSWGISVPDTKDHTFYVWFDALLGYVSAICPNMSD 240 Query: 248 P--DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 P + S WPAD+H IGKDILRFHA+YWPA LLSA + +PK+VF HGF+ +G+K+ K Sbjct: 241 PSLESSINNGWPADIHFIGKDILRFHAVYWPAMLLSAGMDVPKRVFGHGFLTREGQKMGK 300 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGNV+DP ++ + G +A+R++L+++I+ G DG + +N DLAN IGNL++R+ Sbjct: 301 SLGNVLDPNLLLSKYGKEAVRWYLLKDISLGSDGDFQNKRFVDIINNDLANTIGNLLNRT 360 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 SM K +D +P D ++ C+ +++ + + A +++L + Sbjct: 361 SSMSRKWFDNKVPDTYELI-IDNTLQLCCNEAVEKFINHFNLYELDLAANVILNLAINTN 419 Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIR 456 Y + ++PW+L K N ++Y +E R Sbjct: 420 LYLNEKQPWKLIKDENNISIVCNIIYDVLESTR 452 >gi|308803669|ref|XP_003079147.1| Methionyl-tRNA synthetase, class Ia (ISS) [Ostreococcus tauri] gi|116057602|emb|CAL53805.1| Methionyl-tRNA synthetase, class Ia (ISS) [Ostreococcus tauri] Length = 577 Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 192/521 (36%), Positives = 298/521 (57%), Gaps = 28/521 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I Y N QPHIGH Y +AD AR+ R G DV F TGTDEHG K+ ++A G+ Sbjct: 53 YVTTPIYYVNDQPHIGHVYTSTVADAYARYARARGADVFFLTGTDEHGLKVEQSADKRGI 112 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + D+NS+ FRD+ DIS+DDFIRTT+ RH R L + + ++ +Y G + GW Sbjct: 113 EPQALADENSQKFRDVMTSYDISFDDFIRTTDARHERQVRALVEALQERDAVYLGQFEGW 172 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y E YY + + K D + + + V+ EE Y+FRLS +Q +L + + +PEF+ Sbjct: 173 YDEGQEEYYTESKA-KELDYKSPISGKDMVR-SSEENYYFRLSKFQKELEALHADNPEFL 230 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 P RRNE+I + GL D+ +SR F WGIK+P+D ++++YVWIDAL NY+T G D Sbjct: 231 TPSARRNEMIQRLNEGLNDVPISRTNFKWGIKMPEDEKHVIYVWIDALMNYITAIGVGDG 290 Query: 248 PD----GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 D ++K+WPA +H++ K+I FH++ WPA L++ +LPLP++V +H F + +G K+ Sbjct: 291 KDDAVYSERSKYWPASVHIMAKEISWFHSVIWPALLMALDLPLPQRVHAHAFWIREGRKM 350 Query: 304 SKSLGNVIDPI---EVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIG 359 SKSLGN +D E G+DA+RY+L E G D + D +++ ++DL N +G Sbjct: 351 SKSLGNFVDLACMDRFKEHYGLDAIRYYLAVEGPIGANDANFSADRVQEIYSSDLVNTLG 410 Query: 360 NLVSRSVSMILKDYDGMIPTP---GA-FTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N VSR+ +M+ K +DG + + GA T + + + S +++ + + RA A Sbjct: 411 NSVSRTTAMVNKYFDGEVQSEELNGARVTFENWDMPARTSACVEDALKAYDKLDLPRAAA 470 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ +VD + +P+ + K RA S LY +E +R +LL+ +P NK+ Sbjct: 471 AAKQIIMDVDVFITETEPFRMAKDASKRAELSACLYQCLESLRIACVLLEPLMP---NKM 527 Query: 474 FDILFVADENRCFQSLDQR-----LKPGFMLHKTFDPIFPR 509 + F A ++D+R LKPG + K +FPR Sbjct: 528 AE--FDAGVGLGEGTMDERTTWGGLKPGTKVQKL--ALFPR 564 >gi|21358483|ref|NP_650348.1| Methionyl-tRNA synthetase [Drosophila melanogaster] gi|75026854|sp|Q9VFL5|SYMM_DROME RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName: Full=Mitochondrial methionine--tRNA ligase; Short=MtMetRS; Flags: Precursor gi|17861592|gb|AAL39273.1| GH13807p [Drosophila melanogaster] gi|23171238|gb|AAF55037.2| Methionyl-tRNA synthetase [Drosophila melanogaster] gi|220945160|gb|ACL85123.1| Aats-met-PA [synthetic construct] gi|220954980|gb|ACL90033.1| Aats-met-PA [synthetic construct] Length = 582 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 184/501 (36%), Positives = 275/501 (54%), Gaps = 25/501 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQNA 65 Y++T I Y NA PHIGH Y +IAD R+ RL DV TGTDEHG KI +AA Sbjct: 21 YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPEQDVRLCTGTDEHGTKIQQAASLH 80 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV + D S+ +R++ I DDFIRTTE RH W+ + +G IY YS Sbjct: 81 GVPVAKYCDDISQRYREVFRSASIQQDDFIRTTEDRHKRAVANFWRTLHTRGHIYSAAYS 140 Query: 126 GWYSLRDEAYYNDDEV-YKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY + DE + D ++ A G Y+ + +PV+W EE Y FRLS +QD + + ++ Sbjct: 141 GWYCVSDETFLTDSQLRLDEATGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKTE 200 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241 + P + ++ + L D+S+SR + W I +PDD +YVW+DAL NYL++ Sbjct: 201 AR-VRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDDSQTVYVWLDALVNYLSS 259 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY PD + WP VIGKDIL+FH IYW AFLL+A L P +++ H G+ Sbjct: 260 VGY---PDEKFSAHWPPAQQVIGKDILKFHGIYWTAFLLAAGLEPPGQLYVHSHWTVDGQ 316 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS NV+DP++ ++ ++ LRYFL+RE DG Y ++ +N++LA+ +GNL Sbjct: 317 KMSKSKHNVVDPLQAAQQYTMEGLRYFLLREGVAHSDGNYSHVKAQRILNSELADTLGNL 376 Query: 362 VSRSVSMILKDYDGMI-PTPGAFTESD-ESILSVCSRV---LQEIRENMQNQL----IHR 412 +SR+ + L G I P+P A +D L V R+ L ++ E ++ H Sbjct: 377 LSRASAKSLN--PGQIYPSPSAEHLADLLRSLDVAKRLQDSLLQLSERCESHYECNHFHL 434 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPK 468 ++ + + +F++ KPW LK PD R T++ +T++ +R I+LQ +P+ Sbjct: 435 VADTTMAALHAANNFFESSKPWTLKAGAPDGNQARLETIIAMTMDALRLSGIVLQPIIPQ 494 Query: 469 LANKIFDILFVADENRCFQSL 489 LAN++ D L V R + L Sbjct: 495 LANRLLDKLSVPTAQRGWNYL 515 >gi|240047446|ref|YP_002960834.1| methionyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581] gi|239985018|emb|CAT05011.1| Methionyl-tRNA synthetase [Mycoplasma conjunctivae] Length = 512 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 168/479 (35%), Positives = 276/479 (57%), Gaps = 8/479 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +++ Y++T I Y + HIGH Y IA V+ + +L G D TG+DEHGQKI + AQ Sbjct: 3 KKRFYVTTPIYYASGNLHIGHLYTTTIAWVIKNYKKLQGYDARLLTGSDEHGQKIFQKAQ 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 + + FVDQ + F+++ ++ +I YD F RTT H + ++ ++ KG I+K Sbjct: 63 ENQLEPQFFVDQVANKFKNLWEIFEIDYDYFSRTTSDFHKEYVSKIFDEMLAKGFIFKDF 122 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G YS+ DE + + K DG Y+ + ++++EEE +FF + Q LL ++++H Sbjct: 123 YKGLYSVSDEEFLTPKQAIKKDDGYYHPVSGSKMEYIEEESFFFDMKKMQSWLLDFWKNH 182 Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 P+FI + NE+I +F++ G+++LS++R + +WGI + P +++YVW+DAL NY++ Sbjct: 183 PQFISEKKIENELIKNFLEKGIENLSVTRTSLEWGIPVKSQPGHVIYVWLDALFNYISAL 242 Query: 243 GYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 LD + FW +HV+GK+I RFH IYWP FL S NL LP + +HG+++ Sbjct: 243 KPLDK-NSDFDTFWNQSEQIVHVVGKEITRFHCIYWPIFLQSLNLRLPSNIITHGWLITP 301 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GNV+DP+E+I++ V+ ++ F +I G+DG +D+ L N+ LAN G Sbjct: 302 EGKMSKSKGNVVDPLELIKKHDVETIKLFFASQIILGQDGIFDEHNLNLFYNSTLANNFG 361 Query: 360 NLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 NL+SR+++MI K++D +I E+D I + + + N + +AL I Sbjct: 362 NLISRTIAMINKNFDTPLIYNKELLDENDVYIYKQIEQTHYQFIDLFDNLEVDKALKLAI 421 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 SL ++ Y D QKPW + + ++ S VL + I + + +PK + KI IL Sbjct: 422 SLSKNLNSYIDIQKPWLI--SQKEKLSVVLLALLNGIYAVNTMFSVVMPKNSKKILAIL 478 >gi|242017977|ref|XP_002429460.1| methionyl-tRNA synthetase, putative [Pediculus humanus corporis] gi|212514392|gb|EEB16722.1| methionyl-tRNA synthetase, putative [Pediculus humanus corporis] Length = 551 Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 177/491 (36%), Positives = 280/491 (57%), Gaps = 21/491 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++T I Y NA+PHIGH Y I D ++R+ +L +V + GTDEHG K++KAA+ + Sbjct: 34 FLTTPIFYVNAEPHIGHLYTTTIGDAISRYKKLKNCNVKYMVGTDEHGLKVSKAAKALNL 93 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F D S ++ + + DI Y+DFIRTTEKRH T LW KIS IYKG YSGW Sbjct: 94 NVETFCDNVSEKYKSLFNAFDIRYNDFIRTTEKRHKKTAIELWDKISSVDLIYKGEYSGW 153 Query: 128 YSLRDEAYYNDDEVYKGADG--QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 Y DE + ++E+ D +Y + V ++ E Y F+LS +Q+ LL + +S E Sbjct: 154 YCEADETFIPENELEPNDDPLVRYTLNEKKIVNYVTELNYKFKLSKFQNDLLHWLDSG-E 212 Query: 186 FILPIERRNEVISFVKSG--LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241 I P + + + ++++ G LKDLS+SR T WGI +P DP YVW DAL++YL+T Sbjct: 213 IIKPNKFQKILRNWIEEGNVLKDLSISRPTERVSWGIPVPKDPTQTFYVWFDALSSYLST 272 Query: 242 TGYLDNPDGSKAKF-WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY + F WP DL +IGKDIL+FH ++WPAFL++A L PK + H + Sbjct: 273 DGY------PYSNFKWPPDLQIIGKDILKFHGVFWPAFLMAAGLEPPKCILCHSHWMKDN 326 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 KISKS GNVI+P E+ D +RY+L++E DG + L +NADLA+ GN Sbjct: 327 MKISKSTGNVINPFSYAEKYSSDGVRYYLLKEGVAHSDGNFTDKKLIAMLNADLADKFGN 386 Query: 361 LVSRSVSMIL---KDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 L+ R S+ + + Y + T E++++ + ++ + ++ ++ + Sbjct: 387 LLLRCTSLTINRNQKYPSFLKGDRKRFHTTDSENLINALQDLPDKVDMHFEDFNFYKGID 446 Query: 416 QVISLVSEVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++I+ +S +++F+++KPW L K D + V+++T+E +R ILLQ +PK++ + Sbjct: 447 EIITTLSLTNKFFESEKPWYLANKSDESDHLNYVIHLTMESLRVCGILLQPIIPKISENL 506 Query: 474 FDILFVADENR 484 + L + R Sbjct: 507 LNKLSIPISKR 517 >gi|254503294|ref|ZP_05115445.1| methionyl-tRNA synthetase [Labrenzia alexandrii DFL-11] gi|222439365|gb|EEE46044.1| methionyl-tRNA synthetase [Labrenzia alexandrii DFL-11] Length = 508 Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 182/509 (35%), Positives = 281/509 (55%), Gaps = 11/509 (2%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I Y N PHIGHA+ I+AD+L R G +++ +TG DEHGQK +AA+ Sbjct: 4 KSYITTPIYYVNGSPHIGHAFTSIMADILKRNREALGYEMMLSTGVDEHGQKNQEAAEAL 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + ++D + FRD+ + + + +D F+RT+ + H + ++I DKG I K Y+ Sbjct: 64 DMPVTDYLDMRCKEFRDVFEKIGVEFDYFVRTSREGHKTAVAEMEQRIFDKGLIVKKQYT 123 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y E + + ++ + DGQ V+ +E YF ++ +++KLL + + +P+ Sbjct: 124 GTYCKGCEEFKKESDLTE--DGQCPLHPTIKVEQTDETNYFLKMEPFREKLLKHIDENPD 181 Query: 186 FILPIERRNEVISFVKSGLKDLSLSR-KT-FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 FI P +NE+ + L+DL +SR KT G+ +P DP ++ YVW DAL NYLT G Sbjct: 182 FIQPEPFKNELKKMLAEPLEDLCISRPKTRVTLGVDLPFDPDFVTYVWFDALANYLTNIG 241 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG-FILHKGEK 302 + PD +W H+IGKDIL+ H +YWP L++A+LPLPKK+ H ++ G K Sbjct: 242 W---PDDGYQDWWAECEHMIGKDILKPHGVYWPLMLMAADLPLPKKLSVHSHWVGAGGVK 298 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNV+DPIEV++++GVDALR++L R + D D + + N++L N IGNL+ Sbjct: 299 MSKSIGNVVDPIEVMDKLGVDALRWYLARHMRADSDSQISVDLITQAYNSELGNKIGNLL 358 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR K++DG +P PGA T DE++ + + Q I A Q++ Sbjct: 359 SRVAKFSNKNFDGKVPMPGALTAEDEALRRTVVEATKAFAGWINLQDIPAATQQIVEAAV 418 Query: 423 EVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++ Y D Q PW L K +R +TVLYVT++ R L L +P A + +L Sbjct: 419 AMNEYIDQQAPWSLFKNEETRERCATVLYVTLDCQRILFEALTQVIPGSATRALGMLNAP 478 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 + +L G L + D +FPR Sbjct: 479 KAATPWAPELDKLAGGTELGE-IDALFPR 506 >gi|332018089|gb|EGI58703.1| Methionyl-tRNA synthetase, mitochondrial [Acromyrmex echinatior] Length = 547 Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 182/502 (36%), Positives = 269/502 (53%), Gaps = 32/502 (6%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y NA PHIGH Y ++AD + R++ + G FTTGTDEHG KI AA AGV Sbjct: 22 YITTPIFYVNAGPHIGHLYSAVLADAIVRYNNMLGHQTFFTTGTDEHGNKIKAAAATAGV 81 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + S+ FR+M D ++ Y FIRTTEK+H D WK++ ++G IY G YSGW Sbjct: 82 PNLEYCTRISQQFREMCDKFEVDYSRFIRTTEKQHCDAVYHFWKQLEERGHIYLGKYSGW 141 Query: 128 YSLRDEAYYNDDEVYKGADG-----QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y + DEA+ D E+ + D + N V+W EEE Y FRLSA+Q+ L Y+ Sbjct: 142 YCVSDEAFLCDTELVEQRDSTGKVIKVSAESGNIVEWTEEENYKFRLSAFQND-LKYWLK 200 Query: 183 HPEFILPIERRNEVISFVKSG--LKDLSLS--RKTFDWGIKIPDDPQYIMYVWIDALTNY 238 + P + ++ G L+DLS++ R W I P D + +YVW+DAL NY Sbjct: 201 DENTVRPALYHKTLSQWIDEGTCLQDLSITRIRNKMPWAIPSPCDESHSIYVWLDALINY 260 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 LT GY P+ S + WP + +IGKDIL+FH IYWPAFL++ L PK + H Sbjct: 261 LTVLGY---PNESYKELWPPTIQIIGKDILKFHGIYWPAFLIAIGLEPPKTLLCHAHWTV 317 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K+SKS GNVI P E + + LRYF++RE D Y + +N++LA+ + Sbjct: 318 DHRKMSKSKGNVISPFEAANDYSEEGLRYFILREAVPQNDANYSPIKIINTLNSELADTL 377 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAF---------TESDESILSVCSRVLQEIRENMQNQL 409 GNLV+R V + P P + E+ ES+ SV + RE+ + Sbjct: 378 GNLVNRCVGKAINP-SKEFPNPARYWNVLQSQVADETRESLKSVGRKA----RESYEEYN 432 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD---RASTVLYVTVEVIRQLAILLQA 464 +H + V++++ ++ +PW+L+K N D V+ + +E R A++L Sbjct: 433 LHHVVDAVMNMLHCANKMVAHHEPWQLRKQVDNADSIEELKAVISLALESSRIGALILYP 492 Query: 465 FVPKLANKIFDILFVADENRCF 486 +P+L++ + D L + ENR + Sbjct: 493 IIPRLSSSLLDFLNIPKENRTW 514 >gi|195064774|ref|XP_001996635.1| GH19679 [Drosophila grimshawi] gi|193892767|gb|EDV91633.1| GH19679 [Drosophila grimshawi] Length = 578 Score = 320 bits (819), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 175/510 (34%), Positives = 269/510 (52%), Gaps = 29/510 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQNA 65 Y++T I Y NA PHIGH Y +IAD R+ RL V TGTDEHG KI +AA Sbjct: 21 YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPTTTVRLCTGTDEHGTKIQQAAAGH 80 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 V + D+ S +RD+ I++DDFIRTTE+RH W ++ +G IY YS Sbjct: 81 KVPVDQYCDEISARYRDVFKAASIAHDDFIRTTEQRHKQAVAHFWHRLKSRGHIYSAAYS 140 Query: 126 GWYSLRDEAYYNDDEVY--KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY + DE + D ++ + + +Y +PV+W EE Y FRLS +QD + + + Sbjct: 141 GWYCVSDETFLTDSQLRLDESSGTRYSLESGHPVEWTEETNYMFRLSNFQDDVRHWVKQE 200 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241 + P + ++ + L D+S+SR W I +P+D +YVW+DAL NYL++ Sbjct: 201 AR-VRPAKFEKILLDTLSEPLPDVSVSRPANRVHWAIPVPNDDSQTVYVWLDALINYLSS 259 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY P+ +WP +IGKDIL+FH IYWPAFLL+A L P++++ H G+ Sbjct: 260 LGY---PNEEYLAYWPPAQQIIGKDILKFHGIYWPAFLLAAGLSPPQQLYVHSHWTVDGQ 316 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS NV+DP+ ++ ++ LRYFL+RE DG + + +N++LA+ +GNL Sbjct: 317 KMSKSKHNVVDPVLAAKQYTMEGLRYFLLREGVAHSDGNFSHVKALRILNSELADTLGNL 376 Query: 362 VSRSVSMILKDYD-----------GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410 +SR+ + L + ++ A E++L + R Q N Sbjct: 377 LSRACAKTLNPHQVYPASHVEHLPQLLQDLDAAKRLQEALLQLAGRCEQHYECNH----F 432 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKT--NPD--RASTVLYVTVEVIRQLAILLQAFV 466 H VI+ + + +F+ KPWELK PD R T++ +T++ +R I+LQ + Sbjct: 433 HLVADTVIATLHAANNFFECAKPWELKANGKTPDAQRLQTIIAMTMDALRLCGIVLQPMM 492 Query: 467 PKLANKIFDILFVADENRCFQSLDQRLKPG 496 P+L +++ D L V R + L+ G Sbjct: 493 PQLTSRLLDKLNVPSSERSWHHLNASFATG 522 >gi|195501663|ref|XP_002097889.1| GE10041 [Drosophila yakuba] gi|194183990|gb|EDW97601.1| GE10041 [Drosophila yakuba] Length = 579 Score = 320 bits (819), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 181/507 (35%), Positives = 274/507 (54%), Gaps = 33/507 (6%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAAQNA 65 Y++T I Y NA PHIGH Y +IAD R+ RL + V TGTDEHG KI +AA Sbjct: 21 YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPEQHVRLCTGTDEHGTKIQQAASLH 80 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ + D S+ +R++ I +DFIRTTE RH W+++ +G IY YS Sbjct: 81 GIPVAKYCDDISQRYREVFRSAGIQPEDFIRTTEDRHKRAVASFWRRLHTRGHIYSAAYS 140 Query: 126 GWYSLRDEAYYNDDEV-YKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY + DE + D ++ A G Y+ + +PV+W EE Y FRLS +QD + + + Sbjct: 141 GWYCVSDETFLTDSQLRLDEASGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKQE 200 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241 I P + ++ + L D+S+SR + W I +PDD +YVW+DAL NYL++ Sbjct: 201 AR-IRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDDSQTVYVWLDALVNYLSS 259 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY PD + WP VIGKDIL+FH IYWPAFLL+A+L P++++ H G+ Sbjct: 260 VGY---PDEEFSAHWPPAQQVIGKDILKFHGIYWPAFLLAADLEPPRQLYVHSHWTVDGQ 316 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS NV+DP++ + ++ LRYFL+RE DG Y ++ +N++LA+ +GNL Sbjct: 317 KMSKSKHNVVDPVQAARQYTMEGLRYFLLREGVAHSDGNYSHVKAQRILNSELADTLGNL 376 Query: 362 VSRSVSMILKDYDGMI-PTPGAFTESD------------ESILSVCSRVLQEIRENMQNQ 408 +SR+ + L G I P+ A +D +S+L + R N Sbjct: 377 LSRASAKSLN--PGQIYPSASAEHLADLLRSLDAAKRLQDSLLQLSERCASHYECNH--- 431 Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQA 464 H ++ + + +F++ KPW LK PD R T++ +T++ +R I+LQ Sbjct: 432 -FHLVADTAMATLHAANNFFESSKPWTLKAGAPDGNQARLETIIAMTMDALRLSGIVLQP 490 Query: 465 FVPKLANKIFDILFVADENRCFQSLDQ 491 +P+LAN++ D L V R + L + Sbjct: 491 IIPQLANRLLDKLSVPTAQRGWHYLAE 517 >gi|218883858|ref|YP_002428240.1| methionyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n] gi|218765474|gb|ACL10873.1| methionyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n] Length = 498 Score = 320 bits (819), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 189/481 (39%), Positives = 279/481 (58%), Gaps = 19/481 (3%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T I YPNA PHIGHAY + ADVLARFHRL G V F TG DEHG KI + A+ AG Sbjct: 1 MTTPIYYPNAPPHIGHAYTTVFADVLARFHRLTGGKVFFLTGNDEHGLKIQRVAEKAGKH 60 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 K +VD+ + +R+ +L+ISYD FIRTT+ H + + I KG IYK YSG Y Sbjct: 61 PKEYVDEMANLYREYWRILNISYDYFIRTTDPYHEKAVKEAFNYIYGKGLIYKAKYSGMY 120 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 + E YY+ E Y +G+ Y HN P++++EEE Y+F+LS ++D LL E+ + + Sbjct: 121 CVDCEKYYSPGE-YTEVEGKPYCPIHNKPLEYLEEETYYFKLSEFKDYLLDVLENQ-DIV 178 Query: 188 LPIERRNEVISFVKS-GLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 P + EV S +++ GL+D+S++R + WGI +P D +Y++YVW DAL NYL+ GY Sbjct: 179 YPSQYAREVASKIRNEGLRDVSVARPVERVWWGIPVPFDDKYVIYVWFDALMNYLSGIGY 238 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 D+ + + +W H+IGKDIL FH W + L + ++P P++V H +++ KG KIS Sbjct: 239 PDDKEKNTL-YWSNVHHIIGKDILWFHTAVWFSMLKALDMPPPRRVIVHSYLISKGLKIS 297 Query: 305 KSLGNVIDPIEVIEEV-GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 KS+GNVI E++E G D +RY L R KD + L N +LA+ GNLV Sbjct: 298 KSIGNVISIEELVERYNGSDGVRYLLSRIFNTDKDSEVSFELLDSIYNTELADTFGNLVR 357 Query: 364 RSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R S+ LK G + + S DE++ V S + + M++ + +AL V+++ Sbjct: 358 RVGSLALKKMGGKV-----YKRSIDENVADVISSGIGAYLDAMRSYEVSKALEHVMNIAR 412 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++Y + KPWE K+NP + LY +E+I+ ILL F P ++K+ E Sbjct: 413 YANQYINETKPWE--KSNPSKE---LYTLLELIKVATILLHPFTPMASSKLASAFGFEIE 467 Query: 483 N 483 N Sbjct: 468 N 468 >gi|30425166|ref|NP_780648.1| methionyl-tRNA synthetase, mitochondrial precursor [Mus musculus] gi|85681906|sp|Q499X9|SYMM_MOUSE RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName: Full=Methionine--tRNA ligase 2; AltName: Full=Mitochondrial methionine--tRNA ligase; Short=MtMetRS; Flags: Precursor gi|26340914|dbj|BAC34119.1| unnamed protein product [Mus musculus] gi|124376036|gb|AAI32344.1| Methionine-tRNA synthetase 2 (mitochondrial) [Mus musculus] gi|148667613|gb|EDL00030.1| methionine-tRNA synthetase 2 (mitochondrial) [Mus musculus] gi|187953681|gb|AAI37740.1| Methionine-tRNA synthetase 2 (mitochondrial) [Mus musculus] Length = 586 Score = 320 bits (819), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 184/512 (35%), Positives = 267/512 (52%), Gaps = 32/512 (6%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKAA 62 + Y +T I Y NA PHIGH Y ++AD L R RL F+TGTDEHG KI +AA Sbjct: 37 RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPGSASTRFSTGTDEHGLKIQQAA 96 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ D+ S F + DIS DFIRTTE RH + W + +G +YKG Sbjct: 97 ATAGLAPIELCDRVSAQFLQLFREADISSTDFIRTTEARHRVAVQHFWGVLEARGLLYKG 156 Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY DE + + +V + G G +PV W +EE Y F+LS +++ L Sbjct: 157 IYEGWYCASDECFLPEAKVTRQVGPSGDPCPVSLESGHPVSWTKEENYIFKLSQFREPLQ 216 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235 + ++P+ I P V+ +++ L DLS+SR++ WGI +P D +YVW+DAL Sbjct: 217 RWLGNNPQAITPEPFHQAVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 276 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYLT GY PD +WPA H+IGKDIL+FHAIYWPA LL A L P +++ H Sbjct: 277 VNYLTVVGY---PDADFKSWWPATSHIIGKDILKFHAIYWPALLLGAGLRPPHRIYVHSH 333 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 G+K+SKSLGNV+DP ++ VD RYFL+R+ D Y + + K ++++LA Sbjct: 334 WTVSGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELA 393 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT--------------PGAFTESDESILSVCSRVLQEI 401 + +G L++R + + G P+ P ++++ L L ++ Sbjct: 394 DALGGLLNRCTAYRINP-SGTYPSFCAACFPSEPGLTGPSVRVQAEDYALVTAVATLPKL 452 Query: 402 RENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457 N I++AL V S V + + + PW+L +P+ A TVL+V +E +R Sbjct: 453 VAGYYNDFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPEDAPWLGTVLHVALECLRV 512 Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489 LLQ P LA+K+ L V+ R L Sbjct: 513 FGTLLQPVTPNLADKLLSRLGVSTTERGLGEL 544 >gi|260948078|ref|XP_002618336.1| hypothetical protein CLUG_01795 [Clavispora lusitaniae ATCC 42720] gi|238848208|gb|EEQ37672.1| hypothetical protein CLUG_01795 [Clavispora lusitaniae ATCC 42720] Length = 569 Score = 320 bits (819), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 190/529 (35%), Positives = 283/529 (53%), Gaps = 54/529 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-GLDVLFTTGTDEHGQKIAK 60 K +Y++T I Y NA+PH+GH Y M++ D R+ L G +F TGTDEHG KI Sbjct: 17 KSNGTVYVTTPIFYVNARPHLGHLYSMLLGDTRVRWENLKPGQKTMFLTGTDEHGLKIQA 76 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ KV VD+ S+NF MA+ +++ YD FIRTT+ H W +KG IY Sbjct: 77 VAEKEGIDPKVLVDRVSQNFVQMAEAVNVKYDRFIRTTDNDHVKAVEHFWNAAMEKGLIY 136 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYFFRLSAYQD 174 KG +SGWYS+ DEA+Y +V D + + N V + EEE YFFRLSA++D Sbjct: 137 KGSHSGWYSVSDEAFYPPSQVEDIIDAKTGQPKKVSIETRNEVVFQEEENYFFRLSAFKD 196 Query: 175 KLLSYYESHPEFILPIERRNEVISFVKS-GLKDLSLSRKTF--DWGIKIPDDPQYIMYVW 231 KL+ + E +P F+ P + +E+++ ++ L DLS+SR ++ WGI +P+D +YVW Sbjct: 197 KLIDFLEKNPSFVQPSRKYHELLTELRQEELSDLSVSRPSWRLKWGITVPNDDSQKIYVW 256 Query: 232 IDALTNYLTTTGY--LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289 DAL NYLT GY D P WP +H++GKDI+RFH IYWP FL++A + LPK+ Sbjct: 257 FDALINYLTAAGYPQQDMP------IWPP-IHIVGKDIMRFHCIYWPIFLMAAGIELPKQ 309 Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 V H L G K+SKSLGNV++PIE+ + + LR +L+ + G D + + L Sbjct: 310 VIVHSHWLCDGFKMSKSLGNVVEPIELAQYYDPEPLRIYLMEQSNLGTDCNFSEAALHNH 369 Query: 350 VNADLANGIGNLVSR------SVSMILKDY--------------DGMIPTPGAFTESDES 389 + L N N+VSR V ++D+ D ++ P + +S Sbjct: 370 -RSKLINKWANIVSRIGGDKFDVEQSVQDFFDGKYSDITEMIKRDAVVEAPDQVLLARDS 428 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW----ELKKTNPDRAS 445 ++S S + E+ +MQ +AL + V + +F +PW +L +T A Sbjct: 429 LVSSISSLFSEMDSSMQEFGQMKALHRWWETVELANVFFQTAQPWVYSKKLTQTQDADAD 488 Query: 446 TV----------LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 V +++T E +R I + F+PK A+ + D L V DE R Sbjct: 489 AVAEQTTLMNYIIFLTAEAVRLSTICVLPFMPKTASGLLDRLGVPDETR 537 >gi|157413361|ref|YP_001484227.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] gi|157387936|gb|ABV50641.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] Length = 514 Score = 319 bits (818), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 179/457 (39%), Positives = 254/457 (55%), Gaps = 18/457 (3%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+T + Y N +PH+G Y II D +AR+ RL G DV+F TG DEHG KI + A G+ Sbjct: 5 ITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEDVMFITGVDEHGLKIQRTANEKGIE 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 K D S F + +IS+D FIRT+ K H +K++ DIY G GWY Sbjct: 65 PKSHCDAISEVFNNNWKDWNISFDKFIRTSSKNHELIVNEFYKRVKASDDIYMGVQKGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 + E + ++ E Y H ++W EE FFRLS YQ K + + P FI Sbjct: 125 CVGCEEFKDNPE----NSSTYKCPIHQKNLEWKNEENLFFRLSKYQ-KEIEKIINEPSFI 179 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT------T 241 PIER+NE+I+FV GLKD S+SR WGI +P + YVW DAL Y++ T Sbjct: 180 EPIERKNEIINFVSRGLKDFSISRTNVTWGIPVPGYDNHTFYVWFDALLGYVSAISSDAT 239 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 L N S K WPAD+H+IGKDILRFHA+YWPA L+SA + +PKKVF HGF+ +G+ Sbjct: 240 EHSLKN---SINKGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQ 296 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+ KSLGNV+DP ++ + G D +R++L+++I+ G DG + +N DLAN IGNL Sbjct: 297 KMGKSLGNVLDPDLLLTKYGNDPVRWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNL 356 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R+ SM K +D +P T + + + ++ N N + A +V+SL Sbjct: 357 LNRTSSMSRKWFDNKVPN-NEKTLIENKLENFAKIAVENYIYNFDNYKLDLAANEVLSLA 415 Query: 422 SEVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIR 456 + Y + +PW L +K N ++Y +E R Sbjct: 416 INTNLYLNDNQPWLLIKEKDNLPLVKEIIYNVLESTR 452 >gi|158291055|ref|XP_312573.4| AGAP002383-PA [Anopheles gambiae str. PEST] gi|157018191|gb|EAA07531.4| AGAP002383-PA [Anopheles gambiae str. PEST] Length = 563 Score = 319 bits (818), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 180/501 (35%), Positives = 276/501 (55%), Gaps = 23/501 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRL----DGLDVLFTTGTDEHGQKIAKAAQ 63 +++T I Y NA PHIGH Y +IAD + RF+++ + D +TGTDEHG KI +AA Sbjct: 19 FVTTPIFYVNAAPHIGHLYSSVIADAIHRFNQITRPAESGDCFLSTGTDEHGLKIQQAAI 78 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 +T+ + D S +R++ D I Y FIRTT+ H + W+ ++ IY Sbjct: 79 KHSTSTEDYCDAISTKYRELFDRFQIDYSRFIRTTDTDHRQAVQAFWRSLAASDSIYSAS 138 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182 YSGWY + DE + D ++ + G+ Y+ + +PV+W EEE Y FRLS YQD + + + Sbjct: 139 YSGWYCVPDETFLTDSQLKENERGEKYSLESGHPVEWTEEENYMFRLSRYQDDVRHWVKG 198 Query: 183 -HPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYL 239 I P + ++ +++ L D+S+SR WG+ +P DP +YVW+DAL NYL Sbjct: 199 LEGRRIQPDKFGRILLDWLEEPLPDISISRPMNRVSWGVPVPSDPSQSVYVWLDALVNYL 258 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T GY P S WP + V+GKDIL+FH IYWPAFLL+A + P+++ H Sbjct: 259 TVAGY---PKESFRTRWPPTVQVLGKDILKFHGIYWPAFLLAAQIEPPRQLLVHSHWTVD 315 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 +K+SKS NV+DP E E + LRYFL+RE DG Y + + +N++LA+ +G Sbjct: 316 NQKMSKSKQNVVDPNERAELYTYEGLRYFLLREGVAHSDGNYSDTKVLRILNSELADTLG 375 Query: 360 NLVSRSVSMILKDYDGMIPTP-----GAFTESDES--ILSVCSRVLQEIRENMQNQLIHR 412 NL+SR L + + + P GA E D + +L + + + +N + Sbjct: 376 NLLSRCCGKAL-NAESIFPAVDREALGALKEIDATKRMLEALEEMPDKASSHYKNYNFYL 434 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT-NP-DRA--STVLYVTVEVIRQLAILLQAFVPK 468 + ++ L+ + +F+ PW+LKK+ NP DRA +T+L VT+EV+RQ I Q VP Sbjct: 435 VVDTIVHLLHTANNFFETTAPWKLKKSDNPADRAKLNTILSVTMEVLRQAGIAAQPIVPG 494 Query: 469 LANKIFDILFVADENRCFQSL 489 L+ ++ D L + R + L Sbjct: 495 LSKQLLDKLQIVPTARRWNDL 515 >gi|26335385|dbj|BAC31393.1| unnamed protein product [Mus musculus] Length = 587 Score = 319 bits (818), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 184/512 (35%), Positives = 267/512 (52%), Gaps = 32/512 (6%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKAA 62 + Y +T I Y NA PHIGH Y ++AD L R RL F+TGTDEHG KI +AA Sbjct: 38 RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPGSASTRFSTGTDEHGLKIQQAA 97 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ D+ S F + DIS DFIRTTE RH + W + +G +YKG Sbjct: 98 ATAGLAPIELCDRVSAQFLQLFREADISSTDFIRTTEARHRVAVQHFWGVLEARGLLYKG 157 Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY DE + + +V + G G +PV W +EE Y F+LS +++ L Sbjct: 158 IYEGWYCASDECFLPEAKVTRQVGPSGDPCPVSLESGHPVSWTKEENYIFKLSQFREPLQ 217 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235 + ++P+ I P V+ +++ L DLS+SR++ WGI +P D +YVW+DAL Sbjct: 218 RWLGNNPQAITPEPFHQAVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 277 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYLT GY PD +WPA H+IGKDIL+FHAIYWPA LL A L P +++ H Sbjct: 278 VNYLTVVGY---PDADFKSWWPATSHIIGKDILKFHAIYWPALLLGAGLRPPHRIYVHSH 334 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 G+K+SKSLGNV+DP ++ VD RYFL+R+ D Y + + K ++++LA Sbjct: 335 WTVSGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELA 394 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT--------------PGAFTESDESILSVCSRVLQEI 401 + +G L++R + + G P+ P ++++ L L ++ Sbjct: 395 DALGGLLNRCTAYRINP-SGTYPSFCAACFPSEPGLTGPSVRVQAEDYALVTAVATLPKL 453 Query: 402 RENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457 N I++AL V S V + + + PW+L +P+ A TVL+V +E +R Sbjct: 454 VAGYYNDFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPEDAPWLGTVLHVALECLRV 513 Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489 LLQ P LA+K+ L V+ R L Sbjct: 514 FGTLLQPVTPNLADKLLSRLGVSTTERGLGEL 545 >gi|307207156|gb|EFN84946.1| Methionyl-tRNA synthetase, mitochondrial [Harpegnathos saltator] Length = 566 Score = 319 bits (817), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 183/497 (36%), Positives = 273/497 (54%), Gaps = 24/497 (4%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+T I Y NA PHIGH Y ++AD +AR+H + G TGTDEHG KI AA AG+ Sbjct: 43 ITTPIFYVNAGPHIGHLYSAVLADAIARYHAMLGHRTFLITGTDEHGNKIKAAAAAAGLP 102 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + + S+ FR++ D ++ Y FIRTTEK+H D WK++ ++G IY G Y+GWY Sbjct: 103 NLEYCTKVSQQFRELCDRFEVDYSRFIRTTEKQHCDAVHHFWKRLEERGHIYLGKYAGWY 162 Query: 129 SLRDEAYYNDDEVYKGADG-----QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 + DEA+ +D E+ + D + N V+W EEE Y FRLSA QD L Y+ Sbjct: 163 CVSDEAFLSDAELVEQKDSTGETIKVSAESGNTVEWTEEENYKFRLSALQDD-LKYWLKD 221 Query: 184 PEFILPIERRNEVISFVKSG--LKDLSLS--RKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 + P + +V+ G L+DLS+S R W + P + + +YVW+DAL NYL Sbjct: 222 ENTVRPALYHKILSEWVEEGTCLRDLSISRTRNKVPWAMLSPCNESHSIYVWMDALVNYL 281 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T GY P+ S +FWP + VIGKDIL+FH +YWPAFL++A L PK + H + Sbjct: 282 TALGY---PNESFKEFWPPAVQVIGKDILKFHGVYWPAFLIAAGLEPPKTLLCHAHWIVD 338 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 +K+SKS GNVI P E + D LRYF++RE D Y + +N++LA+ +G Sbjct: 339 HQKMSKSKGNVISPFEAANDYSEDGLRYFILREAVPQNDTNYSSTKITNVLNSELADTLG 398 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR-VLQEI----RENMQNQLIHRAL 414 NLVSR + + P P + +S ++ +R LQ + R++ + +H + Sbjct: 399 NLVSRCAGKTV-NPSREFPDPAKYWNVLQSEVANETREALQSLGEKTRKSYEEYNLHHVV 457 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS-----TVLYVTVEVIRQLAILLQAFVPKL 469 V+S + ++ +PW L+K D S V+ + +E R A++LQ VP+L Sbjct: 458 DAVMSALHSANKMVAHHEPWHLRKRVDDTDSMRELKAVISLALESSRIAALILQPIVPRL 517 Query: 470 ANKIFDILFVADENRCF 486 ++ + D L ++ ENR + Sbjct: 518 SSSLLDFLNISKENRTW 534 >gi|302798545|ref|XP_002981032.1| hypothetical protein SELMODRAFT_154280 [Selaginella moellendorffii] gi|300151086|gb|EFJ17733.1| hypothetical protein SELMODRAFT_154280 [Selaginella moellendorffii] Length = 496 Score = 319 bits (817), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 182/498 (36%), Positives = 262/498 (52%), Gaps = 14/498 (2%) Query: 22 IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81 +G AY I AD ARF RL G +V+F TGTDEHG+KIA AA G K D + + Sbjct: 1 MGSAYPTIAADAFARFQRLQGRNVVFVTGTDEHGEKIATAAAAKGRKPKEHCDLIANEYA 60 Query: 82 DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 + L+ISYD FIRTT++ H +K++ DK DIY Y G Y + E Y + ++ Sbjct: 61 SLWKDLNISYDKFIRTTDEAHERAVEQFYKRVYDKEDIYCANYEGLYCVNCEEYKDAKDL 120 Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201 + P +E+ YFF LS YQ +L + P F+ P R NEV+ +VK Sbjct: 121 I---EEHCCPIHRKPCVERKEKNYFFALSKYQSRLEELLSTRPAFVRPPFRMNEVLGWVK 177 Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT--GYLDNPDGSKAKFWPAD 259 GL D S+SR+ +WGI +P D + +YVW DAL Y++ G P+ + A WPA Sbjct: 178 EGLHDFSISREAVEWGIPVPTDKKQTIYVWFDALLGYISALLDGKEVTPENAAASGWPAS 237 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 +H+IGKDILRFHA+YWPA L SA +P+ VF HGF+ G K+ KSLGN I+P E++ Sbjct: 238 VHIIGKDILRFHAVYWPAMLWSAGFAIPETVFGHGFLTKDGLKMGKSLGNTIEPQELVSR 297 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 GVD++RYF + E+ G+DG Y ++ VNA LAN IGNL++R++ ++ K+ I Sbjct: 298 FGVDSVRYFFLNEMEFGRDGDYSEERFITIVNAHLANTIGNLLNRTLGLLKKNCASTISV 357 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 + + + + A ++SL + + Y + + PW K Sbjct: 358 DSESIPEENPVRVFAEAAVARAKRRYSELHFSSACEALLSLANTGNAYLEERAPWTGFKQ 417 Query: 440 NPDRASTV----LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR--- 492 A+ L V +E +R L++ L VP L +++ L DE+ S D Sbjct: 418 KATPAAEAAAKDLAVILESVRILSVALSPVVPDLCKRMWLQLGYQDEHFNQISWDDTRWG 477 Query: 493 -LKPGFMLHKTFDPIFPR 509 LK G L T P+FP+ Sbjct: 478 GLKAG-QLVATPSPVFPK 494 >gi|212645096|ref|NP_001129797.1| hypothetical protein Y105E8A.20 [Caenorhabditis elegans] gi|193247911|emb|CAQ76500.1| C. elegans protein Y105E8A.20b, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 524 Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 180/500 (36%), Positives = 280/500 (56%), Gaps = 24/500 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD--GLDVLFTTGTDEHGQKIAKA 61 + ++++ I Y NA+PHIGHAY ++ DV R++RL G F+ GTDEHG KI +A Sbjct: 10 KSSTFVTSPIFYANAEPHIGHAYTAVLCDVAHRWNRLKHPGAQAQFSIGTDEHGSKIFQA 69 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A A T K F D+ S F D+ L++S+ +FIRTT+ H + + W KI D G IYK Sbjct: 70 ALAAKSTPKQFCDRVSSKFSDLFTDLELSHTNFIRTTDPAHLEAVQHFWMKIQDNGYIYK 129 Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 YSG+YS+ DE + +++V K GA+ + PV+W+EEE Y FRLS +++K+ Sbjct: 130 STYSGYYSITDECFIPEEDVVKKIVEGGAEKLTLKSNGTPVEWIEEENYMFRLSEFREKV 189 Query: 177 LSYYESHPEFILPIERRN-EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 + + P + ++ + S S +S SR WGI +P+DP +YVW+DAL Sbjct: 190 AEWINRENIVVHPSKYKSLALTSLEMSEDLSISRSRSRLSWGIPVPNDPTQTIYVWLDAL 249 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYLT TG+ P+ WP VIGKDI +FH YWPAFL++A L LP+KVF HG Sbjct: 250 VNYLTVTGF---PNAQSV--WPPTCQVIGKDITKFHLYYWPAFLMAAGLSLPQKVFIHGH 304 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 L K+SKSLGNV++P E I + + LRYFL++ D ++ + + +N+DL Sbjct: 305 WLIDNVKMSKSLGNVVNPSEAITKFTAEGLRYFLLKHGNPSYDCSFNWNSCLQTINSDLV 364 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL------ 409 N +GNL++RS + + +GM P + + I ++++ + E+ +N + Sbjct: 365 NNVGNLLNRSTVEKI-NKEGMYPK-MEIEDIEAEIRENAKKLMEMVEESRENCVDLYDEM 422 Query: 410 -IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468 + + ++ + E +R F + +PW K+ + R ++L+VT + IR + ILLQ PK Sbjct: 423 SYFKIIENLMLTMKEANRLFQSSQPW--KEIDEKRLKSLLFVTYDTIRVVTILLQPITPK 480 Query: 469 LANKIFDILFVADENRCFQS 488 +A + L V R ++ Sbjct: 481 MAEFCLNRLGVPKNERNLEN 500 >gi|189193705|ref|XP_001933191.1| methionyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187978755|gb|EDU45381.1| methionyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 518 Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 180/486 (37%), Positives = 261/486 (53%), Gaps = 27/486 (5%) Query: 28 MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87 M++ DV+ R+H L G L TGTDEHG K+ +AA AG+ K F D+ + F+++A Sbjct: 1 MVLTDVVKRWHLLKGEKALLCTGTDEHGLKVQRAAAKAGIDPKSFCDKGAEIFKELARKA 60 Query: 88 DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY----- 142 +I+ D F+RTT+ H + + W + +KG IY+ + GWYS+ DE +Y V Sbjct: 61 EITNDHFVRTTDGEHKEAVQYAWFLLQEKGLIYEQKHEGWYSVTDECFYPKSGVQPYLDP 120 Query: 143 -KGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV 196 G Y + V+W EE Y FRLSA++DKLL +Y+++PE+I+P R N+V Sbjct: 121 PTGRKIMVYRLHTSIETGSEVEWSSEENYHFRLSAFRDKLLEFYKNNPEWIVPEARMNDV 180 Query: 197 ISFVKSGLKDLSLSRKTFD---WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253 + V+SGL+DLS+SR FD WGI++P D +YVW+DAL NY T GY P + Sbjct: 181 VQAVESGLEDLSISR-PFDRLTWGIRVPGDDSQTIYVWLDALMNYATKAGYPWTPGREQE 239 Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 WPAD HVIGKDI+RFH IYWPAFL++ LPLPKK+ +H G K+SKS G V+DP Sbjct: 240 GGWPADCHVIGKDIVRFHCIYWPAFLMALGLPLPKKILTHAHWTLGGSKMSKSTGKVVDP 299 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 I+ G D +R+++VRE D YD + + N L +GNL SR V Sbjct: 300 FLAIDRFGSDVMRFYMVREGGIRDDASYDNARIIMQYNKFLRQHLGNLASRVVRGKKWSV 359 Query: 374 DGMIPTPGAFT--ESDESILS-----VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 G I G + E +E S + + E RA+ + + + Sbjct: 360 RGAIERIGGRSAEEWEEGPGSRFRNNSLATIASETDAAFDAYDPRRAVFGITEFIRSTNA 419 Query: 427 YFDAQKPW----ELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 +F PW + P + ++Y++ E +R ILLQ ++P AN++ D L V Sbjct: 420 FFTMSSPWDKILDFGPGEPGEDVDKIIYLSAEALRIAGILLQPYMPNKANQLLDQLGVDR 479 Query: 482 ENRCFQ 487 + R F+ Sbjct: 480 DRRTFE 485 >gi|170029048|ref|XP_001842406.1| methionine-tRNA synthetase [Culex quinquefasciatus] gi|167879456|gb|EDS42839.1| methionine-tRNA synthetase [Culex quinquefasciatus] Length = 553 Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 175/499 (35%), Positives = 276/499 (55%), Gaps = 24/499 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL------DVLFTTGTDEHGQKIAKA 61 +++T I Y NA PHIGH Y +IAD + HR +GL LF+TGTDEHG KI +A Sbjct: 20 FVTTPIFYVNAAPHIGHLYSAVIADAI---HRFNGLLNDPSGPSLFSTGTDEHGTKIQQA 76 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A V + Q S +R + ++ Y FIRTT+ H D + +WK + G IY Sbjct: 77 AAKHSVPVATYCQQISDQYRSLFRDFNVEYSRFIRTTDDDHADAVQSIWKALEASGSIYS 136 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYY 180 YSGWY + DE + D ++ + G + +PV+W EE + FRL +Q +L + Sbjct: 137 AQYSGWYCVPDETFLTDSQLKENDQGVKVSVDSGHPVEWTEERNFMFRLERHQADVLHWI 196 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238 + + ++P + + ++ F++ L D+S+SR WGI++P DP +YVW+DAL NY Sbjct: 197 KGCEDRVVPGKFQKILLDFLEEPLPDISISRPQARVSWGIEVPGDPTQSVYVWLDALVNY 256 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 LT GY P + WP + V+GKDIL+FH IYWPAFL++A L P+++ H Sbjct: 257 LTVAGY---PHPEFGQRWPPTVQVLGKDILKFHGIYWPAFLIAAGLEPPRQLLVHSHWTV 313 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 +K+SKS NV+DP E + LR+FL+RE DG Y + + +NA+LA+ Sbjct: 314 DNQKMSKSKLNVVDPNERASLYTHEGLRFFLLREGVAHSDGNYSDTKVMRILNAELADTF 373 Query: 359 GNLVSRSVSMILKDYDGMIPT--PGAFT-----ESDESILSVCSRVLQEIRENMQNQLIH 411 GNL+SR L + +G++PT P F E + +L + + ++ + +N + Sbjct: 374 GNLLSRCCGKAL-NPEGIVPTINPEVFNELGKLEITKKMLDLLHALPEKCLSHYRNFNFY 432 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLA 470 + VI ++ + +F+ PW+LK ++ +T+L +T+EV+RQ I++Q VP+L+ Sbjct: 433 LVVDSVIQVLHATNNFFETTAPWKLKAPEQRNQLNTILALTMEVLRQTGIIMQPIVPQLS 492 Query: 471 NKIFDILFVADENRCFQSL 489 K+ D L V+ R ++ L Sbjct: 493 GKLLDKLSVSRHRRLWRDL 511 >gi|254568374|ref|XP_002491297.1| Mitochondrial methionyl-tRNA synthetase (MetRS) [Pichia pastoris GS115] gi|238031094|emb|CAY69017.1| Mitochondrial methionyl-tRNA synthetase (MetRS) [Pichia pastoris GS115] gi|328352185|emb|CCA38584.1| methionyl-tRNA synthetase [Pichia pastoris CBS 7435] Length = 547 Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 179/511 (35%), Positives = 282/511 (55%), Gaps = 34/511 (6%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 + K +I+T I Y NA PH+GH Y M++ D R+ L FTTGTDEHG K+ Sbjct: 6 LSSASKYFITTPIFYVNAAPHLGHLYSMLLCDFQKRWLDLKETPNYFTTGTDEHGLKVQI 65 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ ++F D S F+ +A + DI YD FIRTT+ H T R W+ + G IY Sbjct: 66 AAELNKTDPRLFCDNLSNKFKHLAQISDIQYDRFIRTTDADHLATVRQFWETVWKNGYIY 125 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSY 179 KG +SGWYS+ DE +Y + +V + DG+ + + + V + EE YFF+LSA+Q +L+ Sbjct: 126 KGKHSGWYSVSDETFYPESQV-EQRDGKTVSTETGSEVVYESEENYFFKLSAFQSQLIDL 184 Query: 180 YESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALT 236 Y+++P+F++P ++++ + L+DLS+SR + WGI +P+D +YVW DAL Sbjct: 185 YKANPQFVIPANYYSDLLKELEREPLQDLSISRPSSRLQWGISVPNDESQKIYVWFDALV 244 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NYLT+ GY P +FWP H+IGKDI RFH IYWPAFL++A + P+KV HG Sbjct: 245 NYLTSIGY---PSSRYKEFWPG-THLIGKDISRFHCIYWPAFLMAAKVSPPEKVVVHGHW 300 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L G K+SKS GNV DP+ + + GVD+LR FL D + + L + + Sbjct: 301 LMGGSKMSKSKGNVADPLAIGDYYGVDSLRLFLGANSILSNDCDFTERKLNDHRDL-FID 359 Query: 357 GIGNLVSRSVS-----------------------MILKDYDGMIPTPGAFTESDESILSV 393 I N+V+R +S ++ + ++G + +S + I+ Sbjct: 360 KICNVVTRCISKSFDPARSVMSFSNEDMNLVWKRILERGWEGDLEKAAELKKSYDEIVDD 419 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 ++ +I M H+++ ++ L+ +V+++ ++ +PW L K+N ++V ++ Sbjct: 420 AQQLFSKIDVLMSTFTTHKSVGEIFDLMLKVNQFVNSTEPWNL-KSNERLQDLSIFVALD 478 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENR 484 V R ILLQ F+P L+NK+ D++ V R Sbjct: 479 VTRVCLILLQPFIPGLSNKLLDMIKVESSKR 509 >gi|118089314|ref|XP_426247.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 572 Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 179/512 (34%), Positives = 269/512 (52%), Gaps = 33/512 (6%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-VLFTTGTDEHGQKIAKAAQN 64 +L +ST I Y N PHIGH Y ++AD L R L G +TGTDEHG KI +AA Sbjct: 24 RLLLSTPIFYANGPPHIGHVYSALLADALHRHRGLRGAGPSRLSTGTDEHGLKIQQAAAA 83 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + + S F +S+ DFIRT+E RH W + ++G +YKG Y Sbjct: 84 AGTSPPELCARISALFHQAFTQAAVSFTDFIRTSEPRHCQAVCHFWTALQERGALYKGTY 143 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSY 179 GWY +E + + ++ + D Q + + V W +EE Y F+LSA+QD L + Sbjct: 144 EGWYCTAEEGFLPESQLTERVDAQGCTHKVSVESGHEVHWTKEENYMFKLSAFQDPLQKW 203 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237 +P I P V+ ++ L DLS+SR+ WGI +P D +YVW+DAL N Sbjct: 204 LRDNPRAICPEPFYQRVLCWLGEDLPDLSISRERSRLQWGIPVPSDSTQTIYVWVDALVN 263 Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 YL+ GY + + ++WPA HV+GKDIL+FHA+YWPA L++A L P+++F H Sbjct: 264 YLSVLGYPE----THGEWWPAAHHVVGKDILKFHAVYWPALLMAAGLSPPERIFVHSHWT 319 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 +G+K+SKSLGNVIDP E VD RYFL+R+ +D Y + + K VN++L + Sbjct: 320 VRGQKMSKSLGNVIDPFACNERYTVDGFRYFLLRQGVPERDCDYYDEKVVKVVNSELVDA 379 Query: 358 IGNLVSRSVSMILK-----------------DYDGMIPTPGAFTESDESILSVCSRVLQE 400 +G L++RS + + DY A E E ++SV S L+ Sbjct: 380 LGGLLNRSTAPGINPSNTYPCFSETCFPKVVDYRETEALGRAAAEDYEFVVSVASLPLR- 438 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457 + ++ I++AL + V + + +F +PW+L + +P T+++VT+E +R Sbjct: 439 VASYFEDFQIYKALECIALCVRQTNGFFQRHRPWKLDRKDPSEKLWLDTIIHVTLECLRV 498 Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489 LLQ +P A+K+ L V E R +L Sbjct: 499 YGTLLQPVIPHTADKLLSRLAVEPEERLISNL 530 >gi|123968528|ref|YP_001009386.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. AS9601] gi|123198638|gb|ABM70279.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. AS9601] Length = 514 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 175/455 (38%), Positives = 256/455 (56%), Gaps = 14/455 (3%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+T + Y N +PH+G Y II D +AR+ RL G +V+F TG DEHG KI + A G+ Sbjct: 5 ITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEEVIFITGVDEHGLKIQRTANEKGIP 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 K D+ S F + +IS+D FIRT+ K H ++++ DIY G GWY Sbjct: 65 PKSHCDEISEIFNNNWKDWNISFDKFIRTSSKNHEFVVNEFYERVKASDDIYMGVQKGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 + E + ++ E Y H ++W EE FFRLS YQ K + + P FI Sbjct: 125 CVGCEEFKDNPE----NSSTYKCPIHQKNLEWKNEENLFFRLSKYQ-KEIEKIINEPSFI 179 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 PIER+NE+I+FV GLKD S+SR WGI +P + YVW DAL Y++ D Sbjct: 180 EPIERKNEIINFVSRGLKDFSISRTNVTWGIPVPGYDNHTFYVWFDALLGYVSAISS-DA 238 Query: 248 PDGSKAKF----WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 + S K WPAD+H+IGKDILRFHA+YWPA L+SA + +PKKVF HGF+ +G+K+ Sbjct: 239 TEHSLEKSINGGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQKM 298 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 KSLGNV+DP ++++ G D +R++L+++I+ G DG + +N DLAN IGNL++ Sbjct: 299 GKSLGNVLDPDLLLKKYGNDPVRWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNLLN 358 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+ SM K +D +P + S+ + + ++ N N + A +V+SL Sbjct: 359 RTSSMSRKWFDNKVPNNEKIS-SENKLENYAKIAVENYIYNFDNYKLDLAANEVLSLAIN 417 Query: 424 VDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIR 456 + Y + +PW L +K N ++Y +E R Sbjct: 418 TNLYLNDNQPWVLIKEKDNLPLVKEIIYNVLESTR 452 >gi|71119330|gb|AAH99669.1| Methionine-tRNA synthetase 2 (mitochondrial) [Mus musculus] Length = 586 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 183/512 (35%), Positives = 266/512 (51%), Gaps = 32/512 (6%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKAA 62 + Y +T I Y NA PHIGH Y ++AD L R RL F+TGTDEHG KI +AA Sbjct: 37 RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPGSASTRFSTGTDEHGLKIQQAA 96 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ D+ S F + DIS DFIRTTE RH + W + +G +YKG Sbjct: 97 ATAGLAPIELCDRVSAQFLQLFREADISSTDFIRTTEARHRVAVQHFWGVLEARGLLYKG 156 Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY DE + + +V + G G +PV W +EE Y F+LS +++ L Sbjct: 157 IYEGWYCASDECFLPEAKVTRQVGPSGDPCPVSLESGHPVSWTKEENYIFKLSQFREPLQ 216 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235 + ++P+ I P V+ +++ L DLS+SR++ WGI +P D +YVW+DAL Sbjct: 217 RWLGNNPQAITPEPFHQAVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 276 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYLT GY PD +WPA H+IGKDI +FHAIYWPA LL A L P +++ H Sbjct: 277 VNYLTVVGY---PDADFKSWWPATSHIIGKDIFKFHAIYWPALLLGAGLRPPHRIYVHSH 333 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 G+K+SKSLGNV+DP ++ VD RYFL+R+ D Y + + K ++++LA Sbjct: 334 WTVSGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELA 393 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT--------------PGAFTESDESILSVCSRVLQEI 401 + +G L++R + + G P+ P ++++ L L ++ Sbjct: 394 DALGGLLNRCTAYRINP-SGTYPSFCAACFPSEPGLTGPSVRVQAEDYALVTAVATLPKL 452 Query: 402 RENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457 N I++AL V S V + + + PW+L +P+ A TVL+V +E +R Sbjct: 453 VAGYYNDFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPEDAPWLGTVLHVALECLRV 512 Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489 LLQ P LA+K+ L V+ R L Sbjct: 513 FGTLLQPVTPNLADKLLSRLGVSTTERGLGEL 544 >gi|326924254|ref|XP_003208345.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like, partial [Meleagris gallopavo] Length = 569 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 181/511 (35%), Positives = 270/511 (52%), Gaps = 33/511 (6%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-VLFTTGTDEHGQKIAKAAQNA 65 L +ST I Y N PHIGH Y ++AD L R L G +TGTDEHG KI +AA A Sbjct: 22 LLLSTPIFYANGPPHIGHLYSALLADALHRQRGLRGAGPSRLSTGTDEHGLKIQQAAAAA 81 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G + + S F +S+ DFIRT+E RH W + ++G +YKG Y Sbjct: 82 GTSPPELCARISALFHQAFTQAAVSFTDFIRTSEPRHCQAVCHFWAALQERGALYKGTYE 141 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYY 180 GWY +E + + ++ + D Q + + + V W +EE Y F+LSA+QD L + Sbjct: 142 GWYCTAEEGFLPESQLTERVDAQGFTHKVSAESGHEVHWTKEENYMFKLSAFQDPLQKWL 201 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238 +P I P V+ ++ L DLS+SR+ WGI +P D +YVW+DAL NY Sbjct: 202 RDNPRAISPEPFYQRVLCWLGEDLPDLSISRERSRLQWGIPVPSDSTQTIYVWVDALVNY 261 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 L+ GY + G +WPA HV+GKDIL+FHA+YWPA L++A L P+++F H Sbjct: 262 LSVLGYPETHGG----WWPAAHHVVGKDILKFHAVYWPALLMAAGLSPPERIFVHSHWTV 317 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 +G+K+SKSLGNVIDP E VD RYFL+R+ +D Y + + K +N++LA+ + Sbjct: 318 RGQKMSKSLGNVIDPFVCNERYTVDGFRYFLLRQGVPERDCDYYDEKVVKVLNSELADAL 377 Query: 359 GNLVSRSVSMILK-----------------DYDGMIPTPGAFTESDESILSVCSRVLQEI 401 G L++RS + + DY A E E +++V S LQ + Sbjct: 378 GGLLNRSTAPGINPSNTYPCFSETCFPKVVDYMEAEALGRAAAEDYEFVVAVASLPLQ-V 436 Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458 ++ I++AL + V + + +F +PW+L + +P T+++VT+E +R Sbjct: 437 ASYFEDFQIYKALECIALCVRQTNGFFQRHRPWKLDRKDPAEKLWLDTIIHVTLECLRVY 496 Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489 LLQ +P +A+K+ L V E R SL Sbjct: 497 GTLLQPVIPHIADKLLSRLAVEAEERKISSL 527 >gi|150863806|ref|XP_001382407.2| methionyl-tRNA synthetase, mitochondrial [Scheffersomyces stipitis CBS 6054] gi|149385062|gb|ABN64378.2| methionyl-tRNA synthetase, mitochondrial [Scheffersomyces stipitis CBS 6054] Length = 584 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 188/528 (35%), Positives = 284/528 (53%), Gaps = 52/528 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-GLDVLFTTGTDEHGQKIAKAAQNA 65 Y+ST I Y NA PH+GH Y M++AD R+ +LD F TGTDEHG KI AA+ + Sbjct: 25 FYVSTPIFYVNASPHLGHLYSMLLADTRTRWEKLDPKKSAYFLTGTDEHGLKIQTAAEKS 84 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G++ K VD S+NF+ +A+ ++ YD FIRTT+ H + + W + +KG I++G +S Sbjct: 85 GLSPKQLVDSVSQNFKVLAEKFNVDYDRFIRTTDTDHTEVVQFFWNMMMEKGFIHEGSHS 144 Query: 126 GWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 GWYS+ DE +Y + ++ + G + + V + EEE YFF+LS +QD+L+S+ Sbjct: 145 GWYSVSDETFYPETQIEEVVDENGTKKMVSSESRSEVVFQEEENYFFKLSDFQDQLISFL 204 Query: 181 ESHPEFILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237 E +P+FILP R ++++ +K L DLS+SR + W I++P+DP+ +YVW DAL N Sbjct: 205 EKNPKFILPEHRYTQILNILKEAPLPDLSISRPSSRLKWSIEVPNDPEQKIYVWFDALLN 264 Query: 238 YLTTTGYLDNPDGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV 290 YLT TGY +F WPA H++GKDI++FH IYWP FLL+A + LPK+V Sbjct: 265 YLTATGYPQTFPVENNRFVTSPENPWPA-THIVGKDIIKFHTIYWPIFLLAAGIELPKQV 323 Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350 H L G K+SKSLGNV+DP +++E G DA+R+FL+ D Y ++ L + Sbjct: 324 IVHAHWLSDGFKMSKSLGNVVDPFDILEYYGEDAVRFFLMENSNIQDDCKYREELLHQTR 383 Query: 351 NADLANGIGNLVSRSVSMI--------------LKDYDGMIPTPGAFTESDESILSVCSR 396 A + NL+SR + D D +I + +SI+ Sbjct: 384 EA-IIGKYANLMSRCGNSKFDIRQSVEDWRNGRFSDVDTLINEQALNKDQTQSIIEARDN 442 Query: 397 V---LQEIRENMQNQLI----HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--- 446 + L + NM ++L RA+ + V ++ F +PW K D A + Sbjct: 443 LVASLNGLYTNMDSKLADFDHSRAIQNWWTAVYYGNQLFQLSEPWLYTKLLKDTAVSDAD 502 Query: 447 ----------VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 +++ E +R +IL+ VP+L+ KI D L VA R Sbjct: 503 KESYRILQNYFVFLAAETVRITSILITPIVPRLSEKILDRLSVASGAR 550 >gi|71008184|ref|XP_758191.1| hypothetical protein UM02044.1 [Ustilago maydis 521] gi|46097863|gb|EAK83096.1| hypothetical protein UM02044.1 [Ustilago maydis 521] Length = 634 Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 191/534 (35%), Positives = 287/534 (53%), Gaps = 58/534 (10%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFH----------------------RLDGLDV 45 Y++T I Y NA PHIGH Y +IAD LAR+H D + Sbjct: 63 YVTTPIFYVNADPHIGHLYSDVIADALARYHGYMRSGYSTYNHCDGPNPSTNSMTDMVRP 122 Query: 46 LFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105 +F+TGTDEHG K+ K A+ A + D+ S+ F+ +AD +ISY FIRTT+ H Sbjct: 123 MFSTGTDEHGLKMQKVAEAASEDPRALCDRISQRFKHLADAANISYTHFIRTTDTDHKVA 182 Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWM 160 LW+ + DKG IY+G + GWY++ DEA+Y + +V G DG+ V+W Sbjct: 183 VEHLWRTLRDKGHIYQGSHEGWYAVSDEAFYPEGQVKTVVGEDGKEVRQSIETGAKVEWS 242 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218 +E Y FRLS +Q L+ + ++P+ I P ++ EV++ V++GL DLS+SR + WGI Sbjct: 243 QEVNYKFRLSNFQKPLVEWLRANPKAIQPAQKHAEVLAEVEAGLTDLSISRPSSRLSWGI 302 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGY-----LDNPDGSKA--KFWPADLHVIGKDILRFH 271 ++P+D ++ +YVW+DALTNYLT GY +G+ A WPAD+HV+GKDI+RFH Sbjct: 303 RVPEDDEHSIYVWVDALTNYLTAAGYPFAASTGQAEGNVALSSAWPADVHVVGKDIVRFH 362 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 AIYWPA LL+A LPLP+ + +H K+SKS GNV +P E I+ G+DALR+FL+R Sbjct: 363 AIYWPAMLLAAGLPLPRTILAHSHWTMNKAKMSKSRGNVANPFEAIDTFGLDALRFFLLR 422 Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSR----SVSMILKDYDGMIPTPGAFTES 386 G D Y+ L + L +GNLVSR + L D+ T Sbjct: 423 VGGNFGSDSDYNPTVLVEYHRKYLQGQLGNLVSRICAPKIHARLNDFARDAATHVLHRPL 482 Query: 387 DESI--------LSVCSRV---LQEIRENMQNQLIHRALAQVI-----SLVSEVDRYFDA 430 E + LS+C+ + L ++ N+ + +A+V+ S+++ + Sbjct: 483 KEQVELHMDSESLSLCTALETSLTQLPANVDALMSDFEVAKVLELILESVIASTNELIQR 542 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 +PW T+P + + E +R A+LLQ F+P+ + + D L + +R Sbjct: 543 LEPWS-ASTHPVVVLETVVLVTESLRISALLLQPFMPQKMSALLDTLKIPQGSR 595 >gi|19115319|ref|NP_594407.1| mitochondrial methionine-tRNA ligase [Schizosaccharomyces pombe 972h-] gi|74675941|sp|O14000|SYMM_SCHPO RecName: Full=Probable methionyl-tRNA synthetase, mitochondrial; AltName: Full=Mitochondrial methionine--tRNA ligase; Short=MtMetRS; Flags: Precursor gi|2388946|emb|CAB11680.1| mitochondrial methionine-tRNA ligase [Schizosaccharomyces pombe] Length = 539 Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 176/507 (34%), Positives = 271/507 (53%), Gaps = 16/507 (3%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-GLDVLFTTGTDEHGQKIAKAAQNAG 66 +++T I Y NA PH+GH Y +++ D +ARF L + V+ +TGTDEHG K+ AQ G Sbjct: 22 FLTTPIFYVNAAPHLGHLYSLVLTDAIARFQNLKPDVSVISSTGTDEHGLKVQTVAQTEG 81 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 V+ D+NS+ F D+A + + FIRTT +H + + WK I G I + G Sbjct: 82 VSPLQLCDRNSKRFADLAVAANTKFTHFIRTTNPKHQASVQEFWKTIQKAGMISFERHEG 141 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQH------NPVQWMEEEGYFFRLSAYQDKLLSYY 180 WY + DE +Y + + K D + VQW E Y F LS +Q +L+ +Y Sbjct: 142 WYCVSDETFYPESAIQKVVDPATKQEKRVSMETGKEVQWSSEMNYHFLLSKFQSRLIEHY 201 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238 +P F+ P +V+ +K+G+ DLS+SR + WGI +P + Q +YVW+DAL NY Sbjct: 202 NKNPNFVQPSIFHTQVLEELKTGISDLSISRPKQRLSWGIPVPGNSQQTIYVWLDALINY 261 Query: 239 LTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 ++ GY N S + WPA++HVIGKDI+RFH IYWPAFL++A LPLP+K+ H Sbjct: 262 ISVIGYPWLNEKSSLSAGWPANMHVIGKDIIRFHCIYWPAFLMAAGLPLPEKILVHSHWT 321 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 K+SKSLGNV+DP +IE+ GVD +RY+L++ D +D + L+K DL Sbjct: 322 MNKVKMSKSLGNVVDPFWLIEKYGVDTIRYYLLKRGRLTSDSNFDIEELEKDEEHDLRRS 381 Query: 358 IGNLVSRSVS---MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 +G L+SR S I + FTE E I+ + +++ ++ + Sbjct: 382 LGVLLSRLQSKKLFISNEIQKQWHKKDDFTEY-EDIVHELIELPVVCAQSIDGGCVYEVI 440 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 V S++ V + F ++PW+L + ++ T++ V +R ILLQ +P + ++ Sbjct: 441 NLVQSVLRRVTKLFQLKEPWKLSDDSQEKIDTLMLV-AHSLRISGILLQPIMPTKSTELL 499 Query: 475 DILFVADENRCFQSLDQRLKPG-FMLH 500 D L + R Q+ +P F H Sbjct: 500 DQLGIPKNQRSLQNATNVFEPTEFTFH 526 >gi|78184713|ref|YP_377148.1| methionyl-tRNA synthetase [Synechococcus sp. CC9902] gi|78169007|gb|ABB26104.1| methionyl-tRNA synthetase [Synechococcus sp. CC9902] Length = 514 Score = 317 bits (812), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 184/479 (38%), Positives = 272/479 (56%), Gaps = 19/479 (3%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y N +PH+G AY + D LARF RL DV+F TG DEHGQKI + A+ ++ Sbjct: 5 LTTPLYYVNDKPHLGSAYTTLACDALARFKRLTQGDVVFITGVDEHGQKIQRTAELNNIS 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 V D+ S ++D+ +IS D F+RTT RH ++++ GDI G +GWY Sbjct: 65 PIVHCDKISERYQDLWSRWNISQDRFVRTTNPRHLQLVEQFYERVKASGDIVTGRQTGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E Y +D + D Q Q ++W +EE FFRLS YQ + + ++ +FI Sbjct: 125 CVGCEEYKDDPD--DSVDPQCPIHQKT-LEWRDEENLFFRLSRYQ-RDIEELIANDDFIA 180 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P RR EV +FV GL+D S+SR WG+ +P + YVW DAL YLT LD Sbjct: 181 PASRRQEVRNFVARGLRDFSISRVNVSWGLPVPGHSGHTFYVWFDALLGYLT--ALLD-- 236 Query: 249 DGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 DG WPA +HVIGKDILRFHA++WPA L+SA LP+PK+VF HGF+ +G+ Sbjct: 237 DGGSVDLERLADCGWPASVHVIGKDILRFHAVFWPAMLISAGLPVPKRVFGHGFLTREGQ 296 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+ KSLGNV+DP ++E+ G DA+R++L+R+I G DG + + VN DLAN IGNL Sbjct: 297 KMGKSLGNVLDPELLLEKCGADAVRWYLLRDIQFGDDGDFQQQRFSDLVNNDLANTIGNL 356 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ-VISL 420 ++R+ SM K +D +P P L++ ++ EI + +L ++ ++ ++ L Sbjct: 357 LNRTSSMARKWFDNSVP-PHTIDSHKNHPLALKAQATVEIVMSSMPELGFKSASEAILQL 415 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + + PW K + S LYV +E R + +LL +P L+++I D L Sbjct: 416 AIAANGHLNDTAPWSRMKQPGEEHSVANDLYVVLESTRIVGLLLAPLLPDLSSRILDQL 474 >gi|118587914|ref|ZP_01545324.1| methionyl-tRNA synthetase [Stappia aggregata IAM 12614] gi|118439536|gb|EAV46167.1| methionyl-tRNA synthetase [Stappia aggregata IAM 12614] Length = 517 Score = 317 bits (812), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 172/477 (36%), Positives = 268/477 (56%), Gaps = 10/477 (2%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I Y N PHIGHA+ ++AD+L R + G D++ +TG DEHGQK +AA+ Sbjct: 13 KSYITTPIYYVNGSPHIGHAFTSVMADILKRNRQALGYDMMLSTGVDEHGQKNQEAAEKE 72 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G++ + ++D FR + D LD++YD F+RT+ + H + + I DK I K Y+ Sbjct: 73 GMSVEDYLDMRCAEFRAVFDRLDVAYDYFVRTSREGHKTAVAGMEQSIFDKDLIVKKNYT 132 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y E + + ++ + DGQ V+ EE YF ++ ++ +LL + +P+ Sbjct: 133 GTYCKGCEEFKKESDLTE--DGQCPLHPTMKVEQTEETNYFLKMEPFRARLLQHIADNPD 190 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 F+ P +NE+ + L+DL +SR GI++P D +++ YVW DAL NYLT Sbjct: 191 FVQPEAFKNELKQMLSEPLEDLCISRPKARVTLGIELPFDTEFVTYVWFDALANYLTNIN 250 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG-FILHKGEK 302 + P+ +W H+IGKDIL+ H +YWP L++A LPLPKK+ H ++ G K Sbjct: 251 W---PEEGYESWWAECEHLIGKDILKPHGVYWPIMLMAAGLPLPKKLSVHSHWVGAGGVK 307 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNV+DPIEVIE++GVDALR++L R + D D + + N +L N IGNL+ Sbjct: 308 MSKSIGNVVDPIEVIEKLGVDALRWYLARHMRADSDSQISVDFITQSYNTELGNKIGNLL 367 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR+ +DG +P PG + DE+I + + E + I + +I++ Sbjct: 368 SRAAKFSKARFDGKLPAPGPLSPEDEAIRKSVLEATKGMGEWINLAEIPARVQSIITVAD 427 Query: 423 EVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 E++ YF Q PW+L K +R TV+YVT++ +R + L +P A K +L Sbjct: 428 EMNNYFAEQAPWDLIKNEETRERCQTVIYVTLDSLRIVMEALTQVIPASAGKALAML 484 >gi|297526914|ref|YP_003668938.1| methionyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710] gi|297255830|gb|ADI32039.1| methionyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710] Length = 500 Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 184/472 (38%), Positives = 274/472 (58%), Gaps = 17/472 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YPNA PHIGHAY + ADV+AR+HRL G +V F TG DEHG K+ + A+ G Sbjct: 5 FYITTPIYYPNAPPHIGHAYTTVFADVMARYHRLVGDEVFFITGNDEHGLKLQRVAEKKG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + K FVD+ + +R +LDISYD FIRTT++ H T + +K+ DKG IYK Y+G Sbjct: 65 IHPKQFVDEMADVYRKYWGMLDISYDYFIRTTDEYHEKTVKTAIQKLYDKGLIYKASYAG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 WY + E +Y+ E Y DG+ Y H P++W+EEE Y+F+LS ++D ++ ++ + Sbjct: 125 WYCVDCEKFYSPGE-YVEIDGKPYCPIHKKPLEWLEEETYYFKLSEFEDFIIDVLKNK-D 182 Query: 186 FILPIERRNEVISFV-KSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 I P EV+ V K GL+D+S++R + WGI++P D Y +YVW DAL NY++ Sbjct: 183 IIYPRSYALEVLGKVEKEGLRDVSIARPKERVWWGIEVPFDKNYTVYVWFDALLNYISGI 242 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GYL++ D K+WP HVIGKDIL FH + W + L + ++ LPKK+ H F++++G K Sbjct: 243 GYLEDMDRFN-KYWPNVHHVIGKDILWFHTVIWFSILKALDIELPKKLLVHAFLINRGLK 301 Query: 303 ISKSLGNVIDPIEVIEEV-GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 I KS GNVI ++I D +RY L+R KD + N++LA+ +GNL Sbjct: 302 IGKSAGNVIAIEDLINRYQDSDGVRYILMRVFNMDKDVDVSTELFDSIYNSELADTMGNL 361 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 + R + K G++ E SI+ L + E M+ + RA+ V+ L+ Sbjct: 362 IRRIGVLAKKKLGGIVYKREVNKELSTSIME----TLNKYNEYMKTYDVSRAIQTVMDLL 417 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + + Y + +PWE K +P + LY +E +R +L +PK A+KI Sbjct: 418 RKANAYVNMTRPWE--KIDPGKE---LYSLLETVRASTTMLYPIIPKAASKI 464 >gi|58258053|ref|XP_566439.1| methionine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21] gi|57222576|gb|AAW40620.1| methionine-tRNA ligase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 582 Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 190/497 (38%), Positives = 279/497 (56%), Gaps = 27/497 (5%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQN 64 Y++T I Y NA PH+GH + +++ DVLARF RL V+F TGTDEHG KI +AA+ Sbjct: 53 FYVTTPIFYVNASPHVGHLHSLLLTDVLARFSRLRHPQRKVVFATGTDEHGLKIQQAAKA 112 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV + F D S+ FR +A + + S DFIRTTE RH W + GDIYKG + Sbjct: 113 NGVGEQEFCDDVSQRFRKLAKLANASNTDFIRTTELRHVKAVEQFWNTLVASGDIYKGTH 172 Query: 125 SGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182 SGWYS+ DE++Y +V K DG+ + N V W EE + FRL ++ K+L + S Sbjct: 173 SGWYSISDESFYAVSQVTKSPEDGKMIAIETGNEVIWEEETNWKFRLGRHK-KVLEKWLS 231 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLT 240 PE + P R +++ + S L+DLS+SR + W I +P DP+ +YVW+DAL NY+T Sbjct: 232 QPESVHPNTVRLDLLRQL-SSLEDLSVSRPSSRVKWAIPVPGDPEQSIYVWVDALINYIT 290 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY D ++ WPAD+HV+GKDI++FHA++WP+ L SA+LP PK++ +H Sbjct: 291 VLGYPDWEGKGESVGWPADVHVVGKDIIKFHALHWPSLLHSASLPAPKRIIAHAHWTMSH 350 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD---LANG 357 K+SKS GNV+DPI + + G D +R++L+R G D D V LA+ Sbjct: 351 TKMSKSRGNVVDPISAMTQWGEDGVRWYLMR---VGGGLVDDADYNPAEVEVHYRLLADQ 407 Query: 358 IGNLVSR-SVSMILKDYD-----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +GNL+SR S + +LK + G T + DE + + +R+ +E M+ + Sbjct: 408 VGNLLSRISGAKVLKKAEREFDWGNEKTRDRGEDRDEELDGMMARMREEFEGKMEVFGVS 467 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT--VEVIRQLAILLQAFVPKL 469 +A A V+ +V ++ F + PW +P S+V +T +R AILLQ +P Sbjct: 468 QACAGVMDVVMATNKLFTSLAPW-----SPSTPSSVPALTYAYHALRLSAILLQPIIPAK 522 Query: 470 ANKIFDILFVADENRCF 486 A + D L V E R + Sbjct: 523 AGEALDRLGVPAEERSW 539 >gi|301769295|ref|XP_002920066.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like [Ailuropoda melanoleuca] gi|281353829|gb|EFB29413.1| hypothetical protein PANDA_008748 [Ailuropoda melanoleuca] Length = 593 Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 181/508 (35%), Positives = 269/508 (52%), Gaps = 32/508 (6%) Query: 10 STAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKAAQNAG 66 +T I Y NA PHIGH Y ++AD L R RL F+TGTDEHG KI +AA +AG Sbjct: 48 TTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPSAAATRFSTGTDEHGLKIQQAAASAG 107 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + D+ S F+ + IS DFIRTTE RH + W + +G +YKG Y G Sbjct: 108 LAPTELCDRVSAQFQQLFREAGISSTDFIRTTEARHRIAVQHFWGLLKARGLLYKGLYEG 167 Query: 127 WYSLRDEAYYNDDEVYKGADGQ----YYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYE 181 WY +E + + +V + +D Y + + +PV W +EE Y FRLS +++ L + Sbjct: 168 WYCASEECFLPEAKVTRQSDSSGDSCYVSLESGHPVSWTKEENYIFRLSQFREPLQRWLR 227 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239 P+ I P V+ +++ L DLS+SRK+ WGI +P D +YVW+DAL NYL Sbjct: 228 GDPQAITPEPFLRAVLQWLEEELPDLSVSRKSSHLHWGIPVPGDDSQTIYVWLDALVNYL 287 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T GY P+ +WP H+IGKDIL+FHAIYWPA LL A + P +++ H Sbjct: 288 TVIGY---PNAEFKSWWPTTSHIIGKDILKFHAIYWPALLLGAGMSPPHRIYVHSHWTVC 344 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G+K+SKSLGNV+DP ++ VD RYFL+R+ D Y + + K ++++LA+ +G Sbjct: 345 GQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELADALG 404 Query: 360 NLVSRSVSMILKDYDGMIPT---------PGAFTES------DESILSVCSRVLQEIREN 404 L++R + + G P PG S D ++++ + + +++ ++ Sbjct: 405 GLLNRCTAKRINP-SGTYPVFCTTCFPSEPGLVGPSVRAQAEDYALVNAVATLPRQVADH 463 Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAIL 461 N I++AL V S V + + + PW L +P A TVL+V +E +R L Sbjct: 464 YDNFQIYKALEAVSSCVRQTNSFVQRHAPWRLNWESPVDAPWLGTVLHVALECLRVFGTL 523 Query: 462 LQAFVPKLANKIFDILFVADENRCFQSL 489 LQ P LA+K+ L V+ R L Sbjct: 524 LQPVTPSLADKLLSRLGVSATERGLGEL 551 >gi|289621749|emb|CBI51660.1| unnamed protein product [Sordaria macrospora] Length = 613 Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 183/507 (36%), Positives = 291/507 (57%), Gaps = 36/507 (7%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + Y++T I Y NA PH+GH Y M++ADVL R+ +L G + TGTDEHG K+ +AA Sbjct: 60 DNKPFYVTTPIFYVNASPHVGHMYSMVLADVLKRWQKLKGNQAILCTGTDEHGTKVQRAA 119 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + + K F D NS F+++A I +D FIRTT++ H + + W + DKG IY+ Sbjct: 120 MSNDMDPKQFCDLNSAKFQELAAACLIDHDRFIRTTDQDHVEAVKHFWLLLKDKGLIYEA 179 Query: 123 CYSGWYSLRDEAYYNDDEVYKGAD---GQYYNA---QHNPVQWMEEEGYFFRLSAYQDKL 176 + GWY + DE +Y + ++ K D G+ Y A N V+W+EE+ Y FR++A +D+L Sbjct: 180 KHEGWYCVSDECFYPESQLEKRQDPFTGEVYVASIESGNKVEWIEEKNYHFRMTALKDQL 239 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDA 234 L +Y+++P++I+P R N+V+ +V + L+DLS+SR WGI++PDD +YVW+DA Sbjct: 240 LEFYKNNPDWIVPHTRMNQVVDWVTNNLEDLSISRPVSRLSWGIRVPDDESQTIYVWVDA 299 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L NYLT GY P G + W +DILRFH IYWPA LL+ +LPLPK++ SH Sbjct: 300 LINYLTKAGY---PTGLQD--WST------QDILRFHCIYWPALLLALDLPLPKRILSHA 348 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + +K+SKS+GNV++P +E G+D +R+++V D Y L L Sbjct: 349 HWTMEKKKMSKSIGNVVNPFYAMERFGIDTMRFYMVHNGGISNDADYSNGWLTVEYKKHL 408 Query: 355 ANGIGNLVSR-------SVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 NG+GNL +R S+ ++ Y DG + + ++S + +R L ++ + Sbjct: 409 QNGVGNLSARVTRPKQWSLRRAVQSYNDGTMRLQSTGEQINDSCVEHLAR-LDKLASTVD 467 Query: 407 NQLIH----RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV---LYVTVEVIRQLA 459 N+++ AL +++ L+ E + + +PW + K PD + V + E +R Sbjct: 468 NEMLQLNPSHALQKIMGLIGETNAFISNAEPWVVVK-KPDSEALVDRIILTAGESLRIAG 526 Query: 460 ILLQAFVPKLANKIFDILFVADENRCF 486 ILLQ F+P+ A ++ D+L V ++ R F Sbjct: 527 ILLQPFMPEKAAELLDLLGVENDKRTF 553 >gi|302911964|ref|XP_003050609.1| hypothetical protein NECHADRAFT_96414 [Nectria haematococca mpVI 77-13-4] gi|256731546|gb|EEU44896.1| hypothetical protein NECHADRAFT_96414 [Nectria haematococca mpVI 77-13-4] Length = 769 Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 181/495 (36%), Positives = 267/495 (53%), Gaps = 39/495 (7%) Query: 28 MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87 M++ADVL R+ +++G + L TGTDEHG KI +AA G+ K F D N+ FRD+A+V Sbjct: 1 MVLADVLKRWQQINGKEALLCTGTDEHGMKIQQAAAKEGMPPKEFCDNNASKFRDLAEVA 60 Query: 88 DISYDDFIRTTEKRHHDTCRILWKKISDKG----DIYKGCYSGWYSLRDEAYYNDDEVYK 143 +IS+D FIRTT++ H W + + +YKG + GWY + DE +Y +D V Sbjct: 61 NISHDFFIRTTDEDHKLVVEQFWLLLKTRAPEGLGLYKGQHEGWYCVSDECFYPEDLVQP 120 Query: 144 GADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197 Q N V+W+ E+ +FF LS Y++KLL +Y+ +P +I P R NEV Sbjct: 121 SVVPQTGRKIMASIETGNEVEWVTEDTWFFPLSKYKEKLLKFYDENPNWIQPAHRMNEVR 180 Query: 198 SFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD--NPDGSKA 253 ++V+ L+DLS++R WGIK P+DP +YVW+DAL NY+T G+ D + Sbjct: 181 NWVEHHLEDLSITRPASRLSWGIKDPEDPSNTIYVWVDALINYITKAGFGSKWQVDSADK 240 Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 WPAD+ V+GKDI+RFHAIYWPA L++ LPLPKK+ H K+SKSLGNV++P Sbjct: 241 GIWPADVQVVGKDIIRFHAIYWPALLMAVGLPLPKKIVCHNHWTMSNRKMSKSLGNVVNP 300 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++ +D LRYFL+R + D Y D + +L IGNL +R I ++ Sbjct: 301 FFAVQRWNLDPLRYFLMRNGSFKGDMSYANDFIIVAYEKELQANIGNLFNR----ISRNK 356 Query: 374 DGMIPTPGAFTESDE-----------------SILSVCSRVLQEIRENMQNQLIHRALAQ 416 G T A + E S+ ++IR M + + AL + Sbjct: 357 TGRWSTLEATEFAREGKFNDIAGLAAEGPDLLSLEPTLDTAPEKIRNEMDDINLSGALRE 416 Query: 417 VISLVSEVDRYFDAQKPWEL-KKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANK 472 V L+ E +R+ PW + K T+P+ R + V+Y + E +R I+LQ +P A + Sbjct: 417 VFELLRETNRFISDTAPWHMVKDTSPEARVRLNWVIYRSAEALRIAGIMLQPVMPTKAGE 476 Query: 473 IFDILFVADENRCFQ 487 + D L V E R + Sbjct: 477 LLDGLGVKPERRTVE 491 >gi|126696331|ref|YP_001091217.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301] gi|126543374|gb|ABO17616.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301] Length = 514 Score = 316 bits (810), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 182/476 (38%), Positives = 268/476 (56%), Gaps = 14/476 (2%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+T + Y N +PH+G Y II D +AR+ RL G DV+F TG DEHG KI + A G+ Sbjct: 5 ITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEDVIFITGVDEHGLKIQRTANEKGIE 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 K D+ S F + +IS+D FIRT+ K H ++++ DIY G GWY Sbjct: 65 PKSHCDEISEVFNNNWKDWNISFDKFIRTSSKNHEFVVNEFYERVKASDDIYMGVQKGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 + E + ++ E Y H ++W EE FFRLS YQ K + + P FI Sbjct: 125 CVGCEEFKDNPE----NSSTYKCPIHQKNLEWKNEENLFFRLSKYQ-KEIERIINEPSFI 179 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 PIER+NE+I+FV GLKD S+SR WGI +P + YVW DAL Y++ D Sbjct: 180 EPIERKNEIINFVSRGLKDFSISRTNVKWGIPVPGYDNHTFYVWFDALLGYVSAISS-DA 238 Query: 248 PDGSKAKF----WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 + S K WPAD+H+IGKDILRFHA+YWPA L+SA + +PKKVF HGF+ +G+K+ Sbjct: 239 TEHSLEKSINGGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQKM 298 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 KSLGNV+DP ++ + G D +R++L+++I+ G DG + +N DLAN IGNL++ Sbjct: 299 GKSLGNVLDPDLLLTKYGNDPVRWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNLLN 358 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R+ SM K ++ +P +++ + + ++ N N + A +V+SL Sbjct: 359 RTSSMSRKWFNNKVPNKEKIF-NEKKLENFAKIAVENYIYNFDNYKLDLAANEVLSLAIN 417 Query: 424 VDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + Y + +PW L +K N ++Y +E R + +LL +P+L+ KI D L Sbjct: 418 TNLYLNDNQPWLLIKEKDNLPLVKEIIYNVLESTRIIGLLLIPLLPELSTKINDQL 473 >gi|198452215|ref|XP_001358678.2| GA16180 [Drosophila pseudoobscura pseudoobscura] gi|198131835|gb|EAL27820.2| GA16180 [Drosophila pseudoobscura pseudoobscura] Length = 588 Score = 316 bits (810), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 176/506 (34%), Positives = 269/506 (53%), Gaps = 31/506 (6%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQNA 65 Y++T I Y NA PHIGH Y +IAD R+ RL DV TGTDEHG KI +AA N Sbjct: 21 YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPAADVRLCTGTDEHGTKIQQAAANH 80 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 V + + S +R++ I DDFIRTTE+RH W+ + +G IY YS Sbjct: 81 KVPVDQYCQEISSRYREVFQAAHIHNDDFIRTTEERHKQAVAQFWRTLHSRGHIYSAAYS 140 Query: 126 GWYSLRDEAYYNDDEV-YKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY + DE + D ++ A G Y+ + +PV+W EE Y FRLS +QD + + + Sbjct: 141 GWYCVSDEVFLTDSQLRLDEASGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKQE 200 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241 I P + ++ + L D+S+SR + W I +P D +YVW+DAL NYL++ Sbjct: 201 AR-IRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPGDDSQTVYVWLDALVNYLSS 259 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY P+ WP VIGKDIL+FH IYWPAFLL+A L P++++ H G+ Sbjct: 260 LGY---PNEEFLNHWPPAQQVIGKDILKFHGIYWPAFLLAAGLQPPQQLYVHSHWTVDGQ 316 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS NV+DP++ ++ ++ LRYFL+RE DG Y + +N+++A+ +GNL Sbjct: 317 KMSKSKHNVVDPVQAAQQYTMEGLRYFLLREGVAHSDGNYSHVKALRILNSEMADTLGNL 376 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESD------------ESILSVCSRVLQEIRENMQNQL 409 +SR+ + L + P P +D +S+L + R N Sbjct: 377 LSRACAKSLNPRQ-VYPQPHVEHLADLLRSVDAAKRLRDSLLQLSERCEAHYECNH---- 431 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAF 465 H ++ + + +F++ +PWELK N R +T++ +T++ +R I+LQ Sbjct: 432 FHLVADTTMAALHAANNFFESARPWELKTGNEGANEPRLATIIAMTMDALRLCGIVLQPI 491 Query: 466 VPKLANKIFDILFVADENRCFQSLDQ 491 +P+LA ++ D L V R + L++ Sbjct: 492 IPQLATRLLDKLSVPASQRGWDCLNE 517 >gi|134105975|ref|XP_777998.1| hypothetical protein CNBA0050 [Cryptococcus neoformans var. neoformans B-3501A] gi|50260701|gb|EAL23351.1| hypothetical protein CNBA0050 [Cryptococcus neoformans var. neoformans B-3501A] Length = 582 Score = 316 bits (809), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 190/497 (38%), Positives = 278/497 (55%), Gaps = 27/497 (5%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQN 64 Y++T I Y NA PH+GH + +++ DVLARF RL V+F TGTDEHG KI +AA+ Sbjct: 53 FYVTTPIFYVNASPHVGHLHSLLLTDVLARFSRLRHPQRKVVFATGTDEHGLKIQQAAKA 112 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV + F D S+ FR +A + + S DFIRTTE RH W + GDIYKG + Sbjct: 113 NGVGEQEFCDDVSQRFRKLAKLANASNTDFIRTTELRHVKAVEQFWNTLVASGDIYKGTH 172 Query: 125 SGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182 SGWYS+ DE++Y +V K DG+ + N V W EE + FRL ++ K+L + S Sbjct: 173 SGWYSISDESFYAVSQVTKSPEDGKMIAIETGNEVIWEEETNWKFRLGRHK-KVLEKWLS 231 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLT 240 PE + P R +++ + S L+DLS+SR + W I +P DP+ +YVW+DAL NY+T Sbjct: 232 QPESVHPNTVRLDLLRQLSS-LEDLSVSRPSSRVKWAIPVPGDPEQSIYVWVDALINYIT 290 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY D ++ WPAD+HV+GKDI++FHA++WP+ L SA+LP PK++ +H Sbjct: 291 VLGYPDWEGKGESVGWPADVHVVGKDIIKFHALHWPSLLHSASLPAPKRIIAHAHWTMSH 350 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD---LANG 357 K+SKS GNV+DPI + + G D +R++L+R G D D V LA+ Sbjct: 351 TKMSKSRGNVVDPISAMTQWGEDGVRWYLMR---VGGGLVDDADYNPAEVEVHYRLLADQ 407 Query: 358 IGNLVSR-SVSMILKDYD-----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +GNL SR S + +LK + G T + DE + + +R+ +E M+ + Sbjct: 408 VGNLFSRISGAKVLKKAEREFDWGNEKTRDRGEDRDEELDGMMARMREEFEGKMEVFGVS 467 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT--VEVIRQLAILLQAFVPKL 469 +A A V+ +V ++ F + PW +P S+V +T +R AILLQ +P Sbjct: 468 QACAGVMDVVMATNKLFTSLAPW-----SPSTPSSVPALTYAYHALRLSAILLQPIIPAK 522 Query: 470 ANKIFDILFVADENRCF 486 A + D L V E R + Sbjct: 523 AGEALDRLGVPAEERSW 539 >gi|297191075|ref|ZP_06908473.1| methionyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] gi|297150754|gb|EFH30771.1| methionyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] Length = 516 Score = 316 bits (809), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 179/482 (37%), Positives = 266/482 (55%), Gaps = 19/482 (3%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + YI+T + Y NA+PH+G A E++ ADVLAR R G V F TGTD++ K AA+ Sbjct: 17 RTYITTTVPYVNARPHLGFALELVQADVLARHGRRSGEQVRFLTGTDDNSLKNVLAAEAE 76 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDIYKGCY 124 GV + FVD+N+ F + L +S DDFIRT+ + RH LW++ ++ GD+Y+ Y Sbjct: 77 GVGVQEFVDRNAAAFAALRGPLALSSDDFIRTSSDPRHRAGVERLWQRCAEAGDLYRRHY 136 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + E +Y ++ +G+ + P Q + EE +FFRLS + L Sbjct: 137 EGLYCVGCEQFYTPGDL---EEGRCPDHGTEP-QRVSEENWFFRLSRHAGTLRDLITDGT 192 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 I P RRNEV+ ++ GL D S+SR + WGI +P DP ++YVW DAL NY+T+ Sbjct: 193 LRIEPASRRNEVLGLIEGGLHDFSVSRSQSRARGWGIPVPGDPDQVVYVWWDALGNYVTS 252 Query: 242 TGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 GY D + ++W +H+ GK +LRFHA+YWPA LLSA LPLP + H ++ Sbjct: 253 LGY-GTGDDTFDEWWRGSGRRVHLAGKGVLRFHAVYWPAMLLSAGLPLPTDILVHDYLTV 311 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 G KISKS G +DP+E+ + G DA+R++L+R++ D + ++ L R N+DLA G+ Sbjct: 312 DGRKISKSSGTTVDPVELAADAGTDAVRWWLLRDVPRVGDADFTRERLVDRANSDLAGGL 371 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNLV+R V+M+ + DG P + + + C + I + RA A V Sbjct: 372 GNLVNRVVTMVHRYRDGRPPASRPLGLTSKPLAEACDDSPRLIAAALAGFDFRRAAAAVW 431 Query: 419 SLVSEVDRYFDAQKPWELKKT----NPD---RASTVLYVTVEVIRQLAILLQAFVPKLAN 471 ++V E +R DA +PWE K +PD R L ++ LA L+ F+P A Sbjct: 432 TIVEEANRCVDATRPWESAKAERAGDPDAGQRLDRALDALLQACLVLADRLEPFLPGAAA 491 Query: 472 KI 473 +I Sbjct: 492 RI 493 >gi|195392274|ref|XP_002054784.1| GJ22603 [Drosophila virilis] gi|194152870|gb|EDW68304.1| GJ22603 [Drosophila virilis] Length = 583 Score = 315 bits (808), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 177/506 (34%), Positives = 268/506 (52%), Gaps = 31/506 (6%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAAQNA 65 Y++T I Y NA PHIGH Y +IAD R+ RL + V TGTDEHG KI +AA Sbjct: 21 YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRHPERRVRLCTGTDEHGTKIQQAAAAH 80 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 V + D+ S +RD+ I +DDFIRTTE+RH W + +G IY YS Sbjct: 81 KVPVGQYCDEVSARYRDVFGAAGIEHDDFIRTTEQRHKQAVAHFWHSLQSRGHIYSAAYS 140 Query: 126 GWYSLRDEAYYNDDEVYKGA-DGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY + DE + + ++ A G Y+ + +PV+W EE Y FRLS +QD + ++ Sbjct: 141 GWYCVSDETFLTESQLRLDATSGTRYSLESGHPVEWTEETNYMFRLSQFQDDV-QHWVKQ 199 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241 I P + + ++ + L D+S+SR W I +P+D +YVW+DAL NYL++ Sbjct: 200 KACIRPAKFQKILLDTLSEPLPDVSVSRPANRVHWAIPVPNDDTQTIYVWLDALINYLSS 259 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY P+ WP +IGKDIL+FH IYWPAFLL+A L P+++ H G+ Sbjct: 260 LGY---PNEQYRADWPPAQQIIGKDILKFHGIYWPAFLLAAGLAPPQQLHVHSHWTVDGQ 316 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS NV+DP++ ++ ++ LRYFL+RE DG + + +N++LA+ +GNL Sbjct: 317 KMSKSRHNVVDPVQAAQQYTMEGLRYFLLREGVAHSDGNFSHVKALRILNSELADTLGNL 376 Query: 362 VSRSVSMILKDYDGMIPTPG------------AFTESDESILSVCSRVLQEIRENMQNQL 409 +SR+ + L + + P P A ES+L + R Q N Sbjct: 377 LSRACAKSL-NPQQIYPEPHVEHLPHLLHDVDAAKRLQESLLQLQGRCEQHYEGNH---- 431 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELK----KTNPDRASTVLYVTVEVIRQLAILLQAF 465 H I+ + + +F+ KPWELK N R T++ +T++ +R I+LQ Sbjct: 432 FHLVADTAIAALHATNNFFECAKPWELKAGGSSPNAPRLQTIIAMTMDALRLCGIVLQPM 491 Query: 466 VPKLANKIFDILFVADENRCFQSLDQ 491 +P+L +++ D L V R ++ L + Sbjct: 492 IPQLTSRLLDKLNVPTSQRSWRHLQE 517 >gi|194900723|ref|XP_001979905.1| GG21397 [Drosophila erecta] gi|190651608|gb|EDV48863.1| GG21397 [Drosophila erecta] Length = 579 Score = 315 bits (808), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 180/507 (35%), Positives = 272/507 (53%), Gaps = 33/507 (6%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAAQNA 65 Y++T I Y NA PHIGH Y +IAD R+ RL + V TGTDEHG KI +AA Sbjct: 21 YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPEQHVRLCTGTDEHGTKIQQAASLH 80 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ + D S+ +R++ I +DFIRTTE RH W+ + +G IY YS Sbjct: 81 GIPVAKYCDDISQRYREVFRSASIQPEDFIRTTEDRHKRAVANFWRTLYTRGHIYSAAYS 140 Query: 126 GWYSLRDEAYYNDDEV-YKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY + DE + D ++ A G Y+ + +PV+W EE Y FRLS +QD + + ++ Sbjct: 141 GWYCVSDETFLTDSQLRLDEASGTRYSLESGHPVEWTEETNYMFRLSQFQDDVGHWVKAE 200 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241 I P + ++ + L D+S+SR + W I +PDD +YVW+DAL NYL++ Sbjct: 201 AR-IRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDESQTVYVWLDALVNYLSS 259 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY P+ + WP VIGKDIL+FH IYWPAFLL+A L P +++ H G+ Sbjct: 260 VGY---PEEQFSAHWPPAQQVIGKDILKFHGIYWPAFLLAAGLKPPGQLYVHSHWTVDGQ 316 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS NV+DP++ + ++ LRYFL+RE DG Y ++ +N++LA+ +GNL Sbjct: 317 KMSKSKHNVVDPVQAARQYTMEGLRYFLLREGVAHSDGNYSHVKAQRILNSELADTLGNL 376 Query: 362 VSRSVSMILKDYDGMI-PTPGAFTESD------------ESILSVCSRVLQEIRENMQNQ 408 +SR+ + L G I P+ A +D +S+L + R N Sbjct: 377 LSRACAKSLN--PGQIYPSASAEHLADLLRSLDAAKRLQDSLLQLSERCASHYECNH--- 431 Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQA 464 H ++ + + +F++ KPW LK PD R T++ +T++ +R I+LQ Sbjct: 432 -FHLVADTAMAALHAANNFFESSKPWTLKAGAPDGNQARLETIIAMTMDALRLSGIVLQP 490 Query: 465 FVPKLANKIFDILFVADENRCFQSLDQ 491 +P+LAN++ D L V R + L + Sbjct: 491 IIPQLANRLLDKLSVPAAQRGWNYLAE 517 >gi|195145300|ref|XP_002013634.1| GL23293 [Drosophila persimilis] gi|194102577|gb|EDW24620.1| GL23293 [Drosophila persimilis] Length = 592 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 176/506 (34%), Positives = 269/506 (53%), Gaps = 31/506 (6%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQNA 65 Y++T I Y NA PHIGH Y +IAD R+ RL DV TGTDEHG KI +AA N Sbjct: 21 YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPTADVRLCTGTDEHGTKIQQAAANH 80 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 V + + S +R++ I DDFIRTTE+RH W+ + +G IY YS Sbjct: 81 KVPVDQYCQEISSRYREVFQAAHIHNDDFIRTTEERHKQAVAQFWRTLHSRGHIYSAAYS 140 Query: 126 GWYSLRDEAYYNDDEV-YKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY + DE + D ++ A G Y+ + +PV+W EE Y FRLS +QD + + + Sbjct: 141 GWYCVSDEVFLTDSQLRLDEASGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKQE 200 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241 I P + ++ + L D+S+SR + W I +P D +YVW+DAL NYL++ Sbjct: 201 AR-IRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPGDASQTVYVWLDALVNYLSS 259 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY P+ WP VIGKDIL+FH IYWPAFLL+A L P++++ H G+ Sbjct: 260 LGY---PNEEFLDHWPPAQQVIGKDILKFHGIYWPAFLLAAGLQPPQQLYVHSHWTVDGQ 316 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS NV+DP++ ++ ++ LRYFL+RE DG Y + +N+++A+ +GNL Sbjct: 317 KMSKSKHNVVDPVQAAQQYTMEGLRYFLLREGVAHSDGNYSHVKALRILNSEMADTLGNL 376 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESD------------ESILSVCSRVLQEIRENMQNQL 409 +SR+ + L + P P +D +S+L + R N Sbjct: 377 LSRACAKSLNPRQ-VYPQPHVEHLADLLRSVDAAKRLRDSLLQLSERCEAHYECNH---- 431 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAF 465 H ++ + + +F++ +PWELK N R +T++ +T++ +R I+LQ Sbjct: 432 FHLVADTTMAALHAANNFFESARPWELKTGNEGANEPRLATIIAMTMDALRLCGIVLQPI 491 Query: 466 VPKLANKIFDILFVADENRCFQSLDQ 491 +P+LA ++ D L V R + L++ Sbjct: 492 IPQLATRLLDKLSVPASQRGWDCLNE 517 >gi|312882030|ref|ZP_07741784.1| methionyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] gi|309370325|gb|EFP97823.1| methionyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] Length = 499 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 183/477 (38%), Positives = 267/477 (55%), Gaps = 22/477 (4%) Query: 10 STAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69 +T I Y N +PH+GHAY I+AD+ R+ L + TGTDEHG KI +AA + Sbjct: 6 TTPIFYANGEPHLGHAYSGILADIFHRYSLLANSESCLITGTDEHGLKITQAASKSCTEV 65 Query: 70 KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129 + FVD+ S +F ++ L I D FIRTT++ H +WKK+ DKGDIY G Y G Y Sbjct: 66 EDFVDRKSASFAELWSALKIDPDVFIRTTDRFHAQFVEKVWKKLRDKGDIYLGNYQGQYC 125 Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189 + E +YN ++ D +Y VQ EEE Y FRLS Y+++LL +Y S+ +FI+P Sbjct: 126 IGCEQFYNKRDL---VDEKYCAIHKTEVQSFEEETYLFRLSRYREQLLEFYTSNQDFIIP 182 Query: 190 IERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT---TGYL 245 ++ V+ +K L+DLS+SR WGI +P D + +YVWIDAL +YL+ GY Sbjct: 183 TFTQDYVVKQLKEEPLEDLSVSRINHKWGISVPGDENHTIYVWIDALFSYLSAIQKAGY- 241 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 NPD K H++GKDIL+FHAIYWPAFLL+ LPLPK + HG+ +G KISK Sbjct: 242 -NPDQLKKT-----THILGKDILKFHAIYWPAFLLALELPLPKHLIVHGWWKVEGHKISK 295 Query: 306 SL-GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 S+ V+ P E+ D LRY L+++ +DG +D LK +NADL N NLV R Sbjct: 296 SIPETVVHPKAFQTELSNDGLRYALIKQKPLFRDGDLVQDSLKHVINADLVNNFANLVKR 355 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN---QLIHRALAQVISLV 421 + ++ILK G I I++ L ++ Q ++ + L Q++ Sbjct: 356 NNTLILKQLSGEIVGITDLDIECRQIVTEAEVKLDKVINGYQTFDILIVSQLLNQIL--- 412 Query: 422 SEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +E++R+F + PW + K + S+ +V V+R++AIL +P L+ I + L Sbjct: 413 TELNRFFHERSPWLINKGLTREHVSSTCFVVANVVREIAILYSPIIPSLSESILNEL 469 >gi|26006502|gb|AAN77311.1| Putative methionyl-tRNA synthetase [Oryza sativa Japonica Group] Length = 579 Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 176/488 (36%), Positives = 272/488 (55%), Gaps = 22/488 (4%) Query: 37 FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96 ++RL V+F TGTDEHG+KIA +A+ G K D S +++ + LDI YD FIR Sbjct: 70 YYRLLDKRVVFITGTDEHGEKIATSAEACGRNPKDHCDTISNSYKMLWADLDIEYDKFIR 129 Query: 97 TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156 TT+++H + ++ D GDIY+ Y G Y + E Y ++ E+ + + P Sbjct: 130 TTDRKHEAVVNDFYSRVLDSGDIYRADYEGLYCVSCEEYKDEKEL---GENKCCPVHLKP 186 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 +E+ YFF LS YQ +L +P F+ P R NEV +VKSGL+D S+SR + +W Sbjct: 187 CVPRKEDNYFFALSKYQHQLEDLLTKNPNFVRPSHRLNEVQGWVKSGLRDFSISRASVEW 246 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF-------WPADLHVIGKDILR 269 GI +P+D + +YVW DAL Y++ LD DG KA WPA LH+IGKDILR Sbjct: 247 GIPVPNDTKQTIYVWFDALLGYIS--ALLD--DGEKASLQQAVERGWPASLHLIGKDILR 302 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FHA+YWPA L+SA + +P VF HGF+ G K+ KSLGN ++P +++ GVD++RYF Sbjct: 303 FHAVYWPAMLMSAGISVPDAVFGHGFLTKDGMKMGKSLGNTLEPKDLVNRFGVDSVRYFF 362 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +RE+ G DG Y ++ VNA LAN IGNL++R++ ++ K+ + S Sbjct: 363 LREVEFGNDGDYSEERFINIVNAHLANTIGNLLNRTLGLLKKNCKSTLAFDSIAAADGIS 422 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPDRAST 446 + ++ + ++ +N L+ A ++ + + + Y D Q PW K + ++A+ Sbjct: 423 LKDNVENLVDKAKDQFENLLLSSACETLMEIGNLGNLYIDEQAPWSCFKQGGESAEKAAK 482 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQR---LKPGFMLHKT 502 L + +E +R +AI L P L+ +I+ L F D+ R + D + LK G ++ + Sbjct: 483 DLVIILETMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWEDTKWGGLKAGQVMMEP 542 Query: 503 FDPIFPRF 510 P+F R Sbjct: 543 -KPVFARI 549 >gi|255723315|ref|XP_002546591.1| methionyl-tRNA synthetase, mitochondrial [Candida tropicalis MYA-3404] gi|240130722|gb|EER30285.1| methionyl-tRNA synthetase, mitochondrial [Candida tropicalis MYA-3404] Length = 568 Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 193/527 (36%), Positives = 290/527 (55%), Gaps = 45/527 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFT-TGTDEHGQKIAK 60 K + YI+T I Y NA PHIGH Y M+IAD +++ +L+ F TGTDEHG KI Sbjct: 15 KSTKPFYITTPIFYVNAAPHIGHLYSMLIADTRSKWEKLNPNQKSFMLTGTDEHGLKIQA 74 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ K VD+ S+NF +A+ +++YD FIRTT+ H + + W + +KG IY Sbjct: 75 TAEKQGIEPKELVDKVSQNFAYLAEKSNVNYDRFIRTTDPDHIEVVKYFWNLMMEKGYIY 134 Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKL 176 +SGWYS+ DE +Y + ++ + DG+ N V + EE YFF+LS +QD+L Sbjct: 135 TDTHSGWYSVSDETFYPETQIEEVEKDGKMVKISIETKNEVVYQEETNYFFKLSQFQDQL 194 Query: 177 LSYYESHPEFILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233 + Y ESHP+FI P R +++ +K L DLS+SR + W I++P+DP +YVW D Sbjct: 195 IEYLESHPDFIKPYHRYQFILNELKQNKLTDLSISRPSSRLKWSIEVPNDPSQKIYVWFD 254 Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 AL NY+T GY + + ++ + WPA H+IGKDI+RFH IYWP FL++A + LPK+V Sbjct: 255 ALLNYITAAGYPETFNNNELSNMWPA-THIIGKDIIRFHCIYWPIFLMAAGVELPKQVIV 313 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 H L G K+SKSLGNV+DPIE+ E GVD +R+FLV D + D L++ +A Sbjct: 314 HSHWLCDGFKMSKSLGNVVDPIEISEYYGVDPVRFFLVENSNIEDDCKFSVDLLERSRDA 373 Query: 353 DLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCS-------RVLQEIREN 404 L NL+SR + + + T G F ++ I V + + QE+ N Sbjct: 374 VLGK-YCNLISRIGAKNFNIQEAVEYSTSGKFDNIEQIIKDVDNSNGDDLIKASQELIAN 432 Query: 405 MQNQLIH-----------RALAQVISLVSEVDRYFDAQKPWELKK-----TNPDRAST-- 446 + N I +A+ ++++ + F +PW+ K + P+ A + Sbjct: 433 LNNLYITMDTHFKNFEYIKAIQAWWGVINQGNYIFQTSEPWKYSKLLKDESIPEEAKSKY 492 Query: 447 ------VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA--DENRC 485 V Y+ E +R +IL+Q +P+L+NKI + L V D C Sbjct: 493 LTYINYVTYLCAETMRISSILIQPVMPELSNKILNRLQVQSRDSESC 539 >gi|238882840|gb|EEQ46478.1| conserved hypothetical protein [Candida albicans WO-1] Length = 577 Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 194/545 (35%), Positives = 299/545 (54%), Gaps = 53/545 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-GLDVLFTTGTDEHGQKIAK 60 K + YI+T I Y NA PHIGH Y M+IAD ++ +L+ + TGTDEHG KI Sbjct: 15 KSTKPFYITTPIFYVNAAPHIGHLYSMLIADTRNKWEKLNPSKESFMLTGTDEHGLKIQS 74 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ KV VD+ S+NF +A+ D++YD FIRTT+ H + R W + +KG IY Sbjct: 75 TAEKLGLEPKVLVDKVSQNFSKLAEQFDVNYDRFIRTTDNDHIELVRYFWNLMMEKGFIY 134 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKL 176 +SGWYS+ DE ++ + +EV K +++ N V + EE YFF+LS +Q++L Sbjct: 135 TDTHSGWYSISDETFFPETQIEEVVKNGKAVKISSETKNEVVYQEETNYFFKLSMFQEQL 194 Query: 177 LSYYESHPEFILPIERRNEVISFVK-SGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233 + + + +PEFI P R ++ ++ + L DLS+SR + W I++P+D +YVW D Sbjct: 195 IQFLKQNPEFIKPKHRYQFILKELEDTKLPDLSISRPSSRLKWSIEVPNDSTQKIYVWFD 254 Query: 234 ALTNYLTTTGYLDNPDGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 AL NYLT T + + +KF WPA HVIGKDI+RFH IYWP FL++A + L Sbjct: 255 ALLNYLTATKFPHGFEVQDSKFVTPENSIWPAT-HVIGKDIIRFHCIYWPIFLMAAGIEL 313 Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 PK+V H L G K+SKSLGNV+DP+E+ E GVD +R+FLV D + ++ L Sbjct: 314 PKQVIVHSHWLCDGFKMSKSLGNVVDPMEISEYYGVDPVRFFLVENSNIDDDCKFSEELL 373 Query: 347 KKRVNADLANGIGNLVSR------SVSMILKDYDG--------MIPTPGAFTESDESILS 392 ++ +A L NL+SR S+ +K + +I T +S E +LS Sbjct: 374 QRSRDAVLGK-YCNLISRIGGKNFSIEEAVKSFASGEFNNIREIIETYTINKDSVEGLLS 432 Query: 393 VCSRVLQEIRENMQNQLIH--------RALAQVISLVSEVDRYFDAQKPW---------- 434 +++ ++ + + NQ+ H RA+ S++++ ++ F + +PW Sbjct: 433 SLNKLTTDLND-LYNQMDHYFTNFDYIRAIQCWWSVINQANQIFQSAEPWTYVKLINSPE 491 Query: 435 ---ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491 ELK+ + +Y+ E R +IL+Q +P+L+ KI D L V+ F +L Sbjct: 492 TPAELKEKYRILNNYFVYLCAETTRISSILIQPVMPQLSKKILDRLNVSGRTSEFTTLSA 551 Query: 492 RLKPG 496 L+ G Sbjct: 552 DLQYG 556 >gi|328869504|gb|EGG17882.1| methionyl-tRNA synthetase [Dictyostelium fasciculatum] Length = 640 Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 176/500 (35%), Positives = 272/500 (54%), Gaps = 21/500 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y NA PHIGH Y ++AD R+++L G TGTDEHG K+ +AA+ Sbjct: 101 YITTPIFYVNASPHIGHLYTALLADAACRWNKLKGFPTFLVTGTDEHGTKVQEAAKKNNQ 160 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + D S F+ + ++ +I +D+IRTT+ RH + +W ++ G IYKG Y GW Sbjct: 161 NTLQYCDSISSTFKQLFELANIEMNDYIRTTQDRHKKSVHCIWDQLIKSGHIYKGRYEGW 220 Query: 128 YSLRDEAYYNDDEVYKGADGQ-------YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 Y DEA+ ++++ + NPV + EE Y F+LSA+++++ + Sbjct: 221 YCTSDEAFLTEEQIEDKVINEKTKETIKVSKESGNPVVFTVEENYMFKLSAFKEQIKEWL 280 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238 + P I P R ++V++ + GL+DLS+SR + +WGI++P D +YVW+DALTNY Sbjct: 281 VATPNPITPASRVSQVLNAL-DGLRDLSVSRPSSRVEWGIRVPGDDSQTIYVWLDALTNY 339 Query: 239 LTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 LT GY + D W ++ H+IGKDI++FH +YW AFL + LP +V +H Sbjct: 340 LTVAGYPNQTD--PLSVWNYNVEHLIGKDIIKFHTVYWVAFLSAIGAKLPSRVVAHAHWT 397 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 + K+SKSLGNVIDP + IE+ GVD +RYFL+R DG + + ++N DLA+ Sbjct: 398 VERVKMSKSLGNVIDPFKTIEQFGVDPIRYFLLRCGGMENDGDFSTLEVISKLNNDLADT 457 Query: 358 IGNLVSRSVSMILKDYDGMI--PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 GNLVSRS S L + P+ D+ +++ + + I + L Sbjct: 458 YGNLVSRSSSGSLLPTNTFPTRPSDNDLLPIDKDLINSINNLKGHIEDKFDRYDFKGGLE 517 Query: 416 QVISLVSEVDRYFDAQKPWEL------KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 +I + V++YF PW L K + R + V+Y+ E IR +LL + +P+ Sbjct: 518 DIIEFLYTVNKYFVEIAPWTLVPKPGKKAGDLVRLNNVMYIIFESIRVSTLLLSSIIPQS 577 Query: 470 ANKIFDILFVADENRCFQSL 489 A K+ D L + ++R F L Sbjct: 578 AVKVLDHLSIPPKDRSFDQL 597 >gi|26554387|ref|NP_758321.1| methionyl-tRNA synthetase [Mycoplasma penetrans HF-2] gi|26454397|dbj|BAC44725.1| methionyl-tRNA synthetase [Mycoplasma penetrans HF-2] Length = 1087 Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 189/510 (37%), Positives = 282/510 (55%), Gaps = 30/510 (5%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I YP+ PHIGHA+ +IADVL R+ + G + F TG DEHGQKI + A+ Sbjct: 569 KKFYITTPIYYPSGNPHIGHAFTTLIADVLTRYKKKLGYETFFITGMDEHGQKIEEKAKE 628 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + + VD+ ++ F ++ +L I Y FIRTT + H + + + ++ K IY G + Sbjct: 629 LNLKPQELVDKYAKVFDNLWKLLGIEYSHFIRTTAEYHKNVVQETFSELLKKDFIYLGVW 688 Query: 125 SGWYSLR-DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 G Y + +E Y + V K D + Y AQ +P+ EEE YF ++ ++ K +S + Sbjct: 689 KGLYCVSCEENYTKNIAVRKENDDKLYCAQLHPLIQKEEESYFLKIKQFK-KYISSFLKD 747 Query: 184 PEFILPIERRNEVI-SFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 P + PI R NE+ SF+ + DLS+SR F WGI+I ++P++++YVW+DAL NYL+ Sbjct: 748 PNLVYPITRINELFNSFLNNDDFDDLSISRSNFSWGIQIKENPKHVVYVWLDALLNYLSG 807 Query: 242 TGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 GY D + KFW + + ++ K+I RFH IYWP L L P K SHG+I+ Sbjct: 808 LGYRQKDDSNFQKFWNSQDAEIVQLMSKEITRFHCIYWPIMLEMLGLRKPTKYISHGWII 867 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 + K+SKSLGNV+DPI I G DA RY+L++E++ +D + + L N DLAN Sbjct: 868 TEQGKMSKSLGNVLDPIYFINTYGRDAFRYYLLKELSLKEDSVFSEKLLINTFNKDLANN 927 Query: 358 IGNLVSRSVSMILKDYDGMIPTPG----AFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 +GNL +RS+ MI K DG+IP +F E L + I E + I + Sbjct: 928 VGNLFNRSIGMINKYRDGIIPKYSKPKLSFNIEFEKQLKQFDDEITTIIEKLN---IQKI 984 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR-----ASTVLYVTVEVIRQLA-ILLQAFVP 467 L++VI L++E + + + KPW+LKK N ++ S +L VI L +L+ Sbjct: 985 LSRVIDLINECNFFIEQVKPWDLKKENNEKDLDCFLSLILNAVKRVIYYLEPVLIDGSKE 1044 Query: 468 KLA-----NKIFDILFVADENRCFQSLDQR 492 L + FDI FV D F SLD + Sbjct: 1045 ALKQFNIDSSKFDIKFVTD----FSSLDNQ 1070 >gi|293349795|ref|XP_001066991.2| PREDICTED: rCG22562-like [Rattus norvegicus] gi|293361682|ref|XP_237156.4| PREDICTED: rCG22562-like [Rattus norvegicus] gi|149046149|gb|EDL99042.1| rCG22562 [Rattus norvegicus] Length = 586 Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 183/512 (35%), Positives = 267/512 (52%), Gaps = 32/512 (6%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKAA 62 + Y +T I Y NA PHIGH Y ++AD L R RL F+TGTDEHG KI +AA Sbjct: 37 RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPGSGSTRFSTGTDEHGLKIQQAA 96 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ D+ S F + IS DFIRTTE RH + W + +G +YKG Sbjct: 97 ATAGLAPIELCDRVSAQFLQLFREAGISSTDFIRTTEARHRVAVQHFWGVLEARGLLYKG 156 Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY DE + + +V + G G +PV W +EE Y F+LS +++ L Sbjct: 157 IYEGWYCASDECFLPEAKVTRQVGPSGDPCPVSLESGHPVSWTKEENYIFKLSQFREPLQ 216 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235 + ++P+ I P V+ +++ L DLS+SR++ WGI +P D +YVW+DAL Sbjct: 217 RWLRNNPQAITPEPFHQVVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 276 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYLT GY PD +WPA H+IGKDIL+FHAIYWPA LL A L P ++ H Sbjct: 277 VNYLTVVGY---PDADFKSWWPATSHIIGKDILKFHAIYWPALLLGAGLRPPHRICVHSH 333 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 G+K+SKSLGNV+DP ++ VD RYFL+R+ D Y + + K ++++LA Sbjct: 334 WTVSGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELA 393 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT---------PGAFTES------DESILSVCSRVLQE 400 + +G L++R + + G P+ PG S D ++++ + + + Sbjct: 394 DALGGLLNRCTAYRINP-SGTYPSFCAACFPSEPGLMGPSVRVQAEDYALVNAVATLPKL 452 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457 + + I++AL V S V + + + PW+L +P A TVL+V +E +R Sbjct: 453 VAGYYNDFQIYKALEAVSSCVRQTNGFVQRHAPWKLTWESPADAPWLGTVLHVALECLRV 512 Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489 LLQ P LA+K+ L V+ R L Sbjct: 513 FGTLLQPVTPNLADKLLSRLGVSTTERSLGEL 544 >gi|309356566|emb|CAP36935.2| hypothetical protein CBG_19783 [Caenorhabditis briggsae AF16] Length = 1232 Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 185/486 (38%), Positives = 284/486 (58%), Gaps = 18/486 (3%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-----VLFTTGTDEHGQKIAKAA 62 Y+++ I Y NA+PHIGHAY ++ D R+++L LF+ GTDEHG KI +A+ Sbjct: 14 YVTSPIFYANAEPHIGHAYTAVLCDTAHRWNQLKNFKDKESKALFSIGTDEHGSKIFQAS 73 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 Q AG T K F DQ S F + D L+IS+ +FIRTT+ +H ++ + W+ + D+G IYK Sbjct: 74 QLAGTTPKQFCDQVSSKFSTLFDTLNISHTNFIRTTDPKHAESVQHFWRVLQDRGHIYKS 133 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQY-YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 YSG+YS+ +E + ++EV + A+ + V+W+EEE Y FRLS +++K+ + E Sbjct: 134 SYSGYYSISEECFIPENEVEENAENKMVLKTTGTAVEWIEEENYMFRLSEFREKVGEWIE 193 Query: 182 SHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 + + P++ ++ + S G +S +RK WGI +PDDP +YVW+DAL NYLT Sbjct: 194 K-TDVVWPVKYKSLALDSLTLDGDLSISRARKRLSWGISVPDDPSQTIYVWLDALVNYLT 252 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 +GY + WP VIGKDI +FH YWPAFL++A+LPLP++VF HG L Sbjct: 253 VSGYPKD-----RLVWPPTCQVIGKDITKFHLYYWPAFLMAADLPLPQRVFVHGHWLVDN 307 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKSLGNV++P I++ + LRYFL+++ D + + + VN+DL N +GN Sbjct: 308 VKMSKSLGNVVNPKHAIDKFTSEGLRYFLLKQGNPSNDCSFSWNSCLETVNSDLVNNVGN 367 Query: 361 LVSRS-VSMILKD--YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 L++RS V I K Y + E E +L + ++ E + ++ + Q+ Sbjct: 368 LLNRSTVEKINKSGTYPRRVELEKKVKEDTEKLLEMLEESREKCEELYDDMYYYKGIEQL 427 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + E +R F +PW K+T+ +R ++L+VT E IR ++ILLQ PK+AN D L Sbjct: 428 MLTMKEANRVFQLSQPW--KETDSERLESLLFVTYETIRIVSILLQPITPKMANFCLDRL 485 Query: 478 FVADEN 483 V N Sbjct: 486 GVDQRN 491 >gi|6094406|sp|O74634|SYMM_CANAL RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|3641642|dbj|BAA33373.1| mitochondrial methionyl-tRNA synthetase [Candida albicans] Length = 577 Score = 313 bits (802), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 193/545 (35%), Positives = 299/545 (54%), Gaps = 53/545 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-GLDVLFTTGTDEHGQKIAK 60 K + YI+T I Y NA PHIGH Y M+IAD ++ +L+ + TGTDEHG KI Sbjct: 15 KSTKAFYITTPIFYVNAAPHIGHLYSMLIADTRNKWEKLNPSKESFMLTGTDEHGLKIQS 74 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ KV VD+ S+NF +A+ D++YD FIRTT+ H + R W + +KG IY Sbjct: 75 TAEKLGLEPKVLVDKVSQNFSKLAEQFDVNYDRFIRTTDNDHIELVRYFWNLMMEKGFIY 134 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKL 176 +SGWYS+ DE ++ + +EV K +++ N V + EE YFF+LS +Q++L Sbjct: 135 TDTHSGWYSISDETFFPETQIEEVVKNGKAVKISSETKNEVVYQEETNYFFKLSMFQEQL 194 Query: 177 LSYYESHPEFILPIERRNEVISFVK-SGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233 + + + +PEFI P R ++ ++ + L DLS+SR + W I++P+D +YVW D Sbjct: 195 IQFLKQNPEFIKPKHRYQFILKELEDTKLPDLSISRPSSRLKWSIEVPNDSTQKIYVWFD 254 Query: 234 ALTNYLTTTGYLDNPDGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 AL NYLT T + + +KF WPA HVIGKDI+RFH IYWP FL++A + L Sbjct: 255 ALLNYLTATKFPHGFEVQDSKFVTPENSIWPAT-HVIGKDIIRFHCIYWPIFLMAAGIEL 313 Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 PK+V H L G K+SKSLGN++DP+E+ E GVD +R+FLV D + ++ L Sbjct: 314 PKQVIVHSHWLCDGFKMSKSLGNLVDPMEISEYYGVDPVRFFLVENSNIDDDCKFSEELL 373 Query: 347 KKRVNADLANGIGNLVSR------SVSMILKDYDG--------MIPTPGAFTESDESILS 392 ++ +A L NL+SR S+ +K + +I T +S E +LS Sbjct: 374 QRSRDAVLGK-YCNLISRIGGKNFSIEEAVKSFASGEFNNIREIIETYTINKDSVEGLLS 432 Query: 393 VCSRVLQEIRENMQNQLIH--------RALAQVISLVSEVDRYFDAQKPW---------- 434 +++ ++ + + NQ+ H RA+ S++++ ++ F + +PW Sbjct: 433 SLNKLTTDLND-LYNQMDHYFTNFDYIRAIQCWWSVINQANQIFQSAEPWTYVKLINSPE 491 Query: 435 ---ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491 ELK+ + +Y+ E R +IL+Q +P+L+ KI D L V+ F +L Sbjct: 492 TPAELKEKYRILNNYFVYLCAETTRISSILIQPVMPQLSKKILDRLNVSGRTSEFTTLSA 551 Query: 492 RLKPG 496 L+ G Sbjct: 552 DLQYG 556 >gi|194222442|ref|XP_001917887.1| PREDICTED: similar to methionine-tRNA synthetase 2 [Equus caballus] Length = 593 Score = 313 bits (801), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 183/507 (36%), Positives = 268/507 (52%), Gaps = 32/507 (6%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKAA 62 + Y +T I Y NA PHIGH Y ++AD L R+ RL F+TGTDEHG KI +AA Sbjct: 44 RAYFTTPIFYVNAAPHIGHLYSALLADALCRYRRLRVPSAAATRFSTGTDEHGLKIQQAA 103 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ DQ S F+ + IS DFIRTTE RH + W + +G +YKG Sbjct: 104 ATAGLAPAELCDQVSAQFQQLFREASISSTDFIRTTEARHRVAVQHFWGVLKARGLLYKG 163 Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY DE + + +V + G G +PV W +EE Y FRLS +++ L Sbjct: 164 LYEGWYCASDECFLPEAKVTRQPGPSGDLCPVSLESGHPVSWTKEENYIFRLSQFREPLQ 223 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235 + P I P + V+ +++ L DLS+SR++ WGI +P D +YVW+DAL Sbjct: 224 RWLRGDPRAITPEPFHHAVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 283 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYLT GY P+ +WP H+IGKDIL+FHAIYWPA LL A + P +++ H Sbjct: 284 VNYLTVIGY---PNAEFKSWWPTTSHIIGKDILKFHAIYWPALLLGAGMSPPHRIYVHSH 340 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 G+K+SKSLGNV+DP ++ VD RYFL+R+ D Y + + K ++++LA Sbjct: 341 WTVCGQKMSKSLGNVVDPRSCLDRYTVDGFRYFLLRQGVPHWDCDYYDEKVVKLLDSELA 400 Query: 356 NGIGNLVSRSVSMILKDYDGMIPT---------PGAFTES------DESILSVCSRVLQE 400 + +G L++R + + G P PG S D +++S + + ++ Sbjct: 401 DALGGLLNRCTAKRINP-SGTYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQ 459 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457 + ++ N I++AL V S V + + + PW+L +P A TVL+V +E +R Sbjct: 460 VADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWQSPVDAPWLGTVLHVALECLRV 519 Query: 458 LAILLQAFVPKLANKIFDILFVADENR 484 LLQ P LA+K+ L V+ R Sbjct: 520 FGTLLQPVTPSLADKLLSRLGVSATER 546 >gi|68467721|ref|XP_722019.1| likely mitochondrial tRNA methionyl-tRNA synthetase [Candida albicans SC5314] gi|68468040|ref|XP_721859.1| likely mitochondrial tRNA methionyl-tRNA synthetase [Candida albicans SC5314] gi|46443801|gb|EAL03080.1| likely mitochondrial tRNA methionyl-tRNA synthetase [Candida albicans SC5314] gi|46443966|gb|EAL03244.1| likely mitochondrial tRNA methionyl-tRNA synthetase [Candida albicans SC5314] Length = 577 Score = 313 bits (801), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 193/545 (35%), Positives = 296/545 (54%), Gaps = 53/545 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-GLDVLFTTGTDEHGQKIAK 60 K + YI+T I Y NA PHIGH Y M+IAD ++ +L+ + TGTDEHG KI Sbjct: 15 KSTKPFYITTPICYVNAAPHIGHLYSMLIADTRNKWEKLNPSKESFMLTGTDEHGLKIQS 74 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ KV VD+ S+NF +A+ D++YD FIRTT+ H + R W + +KG IY Sbjct: 75 TAEKLGLEPKVLVDKVSQNFSKLAEQFDVNYDRFIRTTDNDHIELVRYFWNLMMEKGFIY 134 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKL 176 +SGWYS+ DE ++ + +EV K +++ N V + +E YFF+LS +Q++L Sbjct: 135 TDTHSGWYSISDETFFPETQIEEVVKNGKAVKISSETKNEVVYQKETNYFFKLSMFQEQL 194 Query: 177 LSYYESHPEFILPIERRNEVISFVK-SGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233 + + + +PEFI P R ++ ++ + L DLS+SR + W I++P+D +YVW D Sbjct: 195 IQFLKQNPEFIKPKHRYQFILKELEDTKLPDLSISRPSSRLKWSIEVPNDSTQKIYVWFD 254 Query: 234 ALTNYLTTTGYLDNPDGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 AL NYLT T + + +KF WPA HVIGKDI+RFH IYWP FL++A + L Sbjct: 255 ALLNYLTATKFPHGFEVQDSKFVTPENSIWPAT-HVIGKDIIRFHCIYWPIFLMAAGIEL 313 Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 PK+V H L G K+SKSLGNV+DP+E+ E GVD +R+FLV D + ++ L Sbjct: 314 PKQVIVHSHWLCDGFKMSKSLGNVVDPMEISEYYGVDPVRFFLVENSNIDDDCKFSEELL 373 Query: 347 KKRVNADLANGIGNLVSR--------------SVSMILKDYDGMIPTPGAFTESDESILS 392 ++ +A L NL+SR S S + +I T +S E +LS Sbjct: 374 QRSRDAVLGK-YCNLISRIGGKNFSIEEAVKSSASGEFNNIREIIETYTINKDSVEGLLS 432 Query: 393 VCSRVLQEIRENMQNQLIH--------RALAQVISLVSEVDRYFDAQKPW---------- 434 S++ ++ + + NQ+ H RA+ S++++ ++ F + +PW Sbjct: 433 SSSKLTTDLND-LYNQMDHYFTNFDYIRAIQCWWSVINQANQIFQSAEPWTYVKLINSPE 491 Query: 435 ---ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491 ELK+ + +Y+ E R +IL+Q +P+L+ KI D L V+ F + Sbjct: 492 TPAELKEKYRILNNYFVYLCAETTRISSILIQPVMPQLSKKILDRLNVSGRTSEFTTFGA 551 Query: 492 RLKPG 496 L+ G Sbjct: 552 DLQYG 556 >gi|322696090|gb|EFY87887.1| methionyl-tRNA synthetase [Metarhizium acridum CQMa 102] Length = 891 Score = 313 bits (801), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 183/526 (34%), Positives = 275/526 (52%), Gaps = 49/526 (9%) Query: 28 MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87 M++ADVL R+ ++ G + F TGTDEHG KI +AA G+ K F D S FR++A Sbjct: 1 MVLADVLKRWQQIKGKETFFLTGTDEHGMKIQRAAAKEGIAPKEFCDNYSNKFRELAAAG 60 Query: 88 DISYDDFIRTTEKRHHDTCRILWKKIS----DKGDIYKGCYSGWYSLRDEAYYNDDEV-- 141 DISYD FIRTT+ H + W ++ + ++YKG + GWY++ DE +Y +D V Sbjct: 61 DISYDAFIRTTDLEHKEAVSEFWLQLKHTLPEHLELYKGTHEGWYAVSDECFYPEDLVRP 120 Query: 142 ----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197 G + + V+W++EE +FF L+ Y+D LL +Y+ +P +I P R NEV Sbjct: 121 DIVPQTGKKIMVSDETGSEVEWVKEETWFFPLTKYKDALLKFYDENPNWITPAHRMNEVR 180 Query: 198 SFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD--NPDGSKA 253 ++V++ L+DLS++R WGI P+D +YVW+DAL NY+T GY + Sbjct: 181 NWVENHLEDLSITRPAARLSWGIPDPEDHNQTIYVWVDALINYITQAGYGRKWHSSSDNT 240 Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 WPAD+ +IGKDILRFHAIYWPA L++ +LPLPK++ H K+SKSLGNV++P Sbjct: 241 GLWPADMQIIGKDILRFHAIYWPALLMALDLPLPKQLLCHNHWTMSNRKMSKSLGNVVNP 300 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR--------- 364 ++ +D LRYFL+R + KD Y + +L IGNL+ R Sbjct: 301 FFAVQRWDIDPLRYFLMRNGSFTKDMSYSNQLIGSVYAKELQANIGNLLYRIARPKVTSK 360 Query: 365 -----SVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +V + G IP + F D+ + + S +E M+ A+ + Sbjct: 361 WSTLEAVGAFRRGAFGEIPGHTSQQLFVSLDDHLEKITSAFFEE----MEKFNTGGAIRE 416 Query: 417 VISLVSEVDRYFDAQKPWELKKT-NPDRA---STVLYVTVEVIRQLAILLQAFVPKLANK 472 V +L+ E +RY +PW L K+ NP + V+Y E +R ILLQ +P A+ Sbjct: 417 VFNLLRETNRYVSDTEPWNLVKSPNPQSRILLNLVIYNCAEALRIAGILLQPIMPTKASL 476 Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLH----------KTFDPIFP 508 + + L V ++ R + + P + K +D IFP Sbjct: 477 LLNELGVREDRRTLEFASKGKDPEYGTEAKTGDSAARLKKWDTIFP 522 >gi|126466399|ref|YP_001041508.1| methionyl-tRNA synthetase [Staphylothermus marinus F1] gi|126015222|gb|ABN70600.1| methionyl-tRNA synthetase [Staphylothermus marinus F1] Length = 500 Score = 313 bits (801), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 181/472 (38%), Positives = 276/472 (58%), Gaps = 17/472 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YPNA PHIGHAY + ADVLAR+HRL G +V F TG DEHG K+ +AA+ G Sbjct: 5 FYITTPIYYPNAPPHIGHAYTTVFADVLARYHRLIGDEVFFMTGNDEHGLKLQRAAEKKG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 V K FVD+ + ++ ++LDISYD FIRTT+ H + +K+ DKG +YK Y+G Sbjct: 65 VHPKQFVDEMADVYKKYWELLDISYDYFIRTTDDYHEKVVKTAIQKLYDKGLVYKASYAG 124 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 WY + E +Y+ E Y +G+ + H P++W+EEE Y+F+LS ++D ++ ++ + Sbjct: 125 WYCVDCEKFYSPGE-YIEINGKPHCPIHKKPLEWLEEETYYFKLSEFEDFIIDVLKNK-D 182 Query: 186 FILPIERRNEVISFV-KSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 + P EV+ V K GL+D+S++R + WGI++P D Y +YVW DAL NY++ Sbjct: 183 IVYPRSYALEVLGKVEKEGLRDVSIARPKERVWWGIEVPFDKNYTVYVWFDALLNYISGI 242 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GYL++ D K+WP HVIGKDIL FH + W + L + ++ LPKK+ H F++++G K Sbjct: 243 GYLEDMDRFN-KYWPNVHHVIGKDILWFHTVVWFSILKALDIELPKKLLVHAFLINRGLK 301 Query: 303 ISKSLGNVIDPIEVIEEV-GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 I KS GNVI ++I+ D +RY L+R KD + N++LA+ +GNL Sbjct: 302 IGKSAGNVIAIEDLIDRYQDSDGVRYILMRVFNMDKDVDVSTELFDSIYNSELADTLGNL 361 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 V R + K G++ E D+ + + L + E M+ + RA+ V+ L+ Sbjct: 362 VRRIGVLAKKKLGGIVYK----REVDKELSTSIVETLNKYNEYMEAYDVSRAIQVVMDLL 417 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + + Y + +PWE K +P + LY +E IR +L +PK A+K+ Sbjct: 418 RKANAYVNLTRPWE--KMDPGKE---LYSLLETIRASTTMLYPIIPKAASKV 464 >gi|189240952|ref|XP_971597.2| PREDICTED: similar to methionine-tRNA synthetase [Tribolium castaneum] Length = 552 Score = 312 bits (800), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 175/506 (34%), Positives = 276/506 (54%), Gaps = 27/506 (5%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL-FTTGTDEHGQKIAK 60 + K +++T I Y NA PHIGH Y +IAD L R+ ++ G F+TGTDEHG KI + Sbjct: 15 QSNSKFFVTTPIYYVNASPHIGHLYSSVIADALYRWQQVLGAGKFKFSTGTDEHGSKIQQ 74 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA + + S +++ +++V ISY DF+RT+++ H W + +KG I+ Sbjct: 75 AAHKNNTNPSDYCTRVSSDYKRLSEVFSISYTDFVRTSDEEHKKCVHKFWNVLKNKGKIF 134 Query: 121 KGCYSGWYSLRDEAYYNDDEVYK--GADGQ---YYNAQHNPVQWMEEEGYFFRLSAYQDK 175 Y+GWY + DE++ + ++ + G DG+ +PV+W+EE Y F L + QD Sbjct: 135 SSKYAGWYCISDESFLTESQLKEKVGPDGRKTIISGESGHPVEWIEEVNYMFPLGSLQDD 194 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWI 232 + Y+ + P + + ++ V G L D+S+SR WGI++PDD +YVW+ Sbjct: 195 V-KYWLRSENAVRPAKFQKILLDMVSKGPLPDISISRPASRVHWGIQVPDDETQTVYVWL 253 Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 DAL NYLT GY S + WP + VIGKDIL+FH IYWP+FL++A L P + Sbjct: 254 DALVNYLTAAGY---SHASLHQIWPPSVQVIGKDILKFHGIYWPSFLIAAGLDPPLSILC 310 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 H GEK+SKS NV+ P + E D LRYFL+RE DG Y + + +N+ Sbjct: 311 HSHWTVDGEKMSKSKNNVVCPFQRSEIYSSDGLRYFLLREGVAHSDGNYSDTKVIRILNS 370 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVLQEIRE------- 403 +LA+ +GNL+SR L + P + ES+ S V ++++++ Sbjct: 371 ELADTLGNLLSRCCGTALNPHQTF---PKIEASAFESVASSDVTKKLIEDVATLPDVCMG 427 Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAIL 461 + N ++A+ +VI+ + + + +F+ KPWELKK + VL++T+E +R IL Sbjct: 428 HYSNFNFYKAVDRVIATLHQANLFFETFKPWELKKESAKTRELDVVLHLTLETLRVCGIL 487 Query: 462 LQAFVPKLANKIFDILFVADENRCFQ 487 LQ +P +A+ + + + VA E R F Sbjct: 488 LQPIIPNIASNLLNKINVARERRTFS 513 >gi|308470944|ref|XP_003097704.1| hypothetical protein CRE_14236 [Caenorhabditis remanei] gi|308239822|gb|EFO83774.1| hypothetical protein CRE_14236 [Caenorhabditis remanei] Length = 539 Score = 312 bits (800), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 183/486 (37%), Positives = 274/486 (56%), Gaps = 23/486 (4%) Query: 14 AYPN----AQPHIGHAYEMIIADVLARFHRLDGLD-------VLFTTGTDEHGQKIAKAA 62 +PN ++PHIGHAY ++ D R++ L + LF+ GTDEHG KI +A+ Sbjct: 34 TFPNLFSISEPHIGHAYTAVLCDTAYRWNVLKNSNNQNSDSRALFSIGTDEHGSKIYQAS 93 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 Q A T K F DQ S F ++ + L++S+ FIRTT+ +H + + WK +S G IYK Sbjct: 94 QLAKKTPKEFCDQVSSKFSNLFENLNLSHTHFIRTTDSKHSEAVQTFWKTLSSNGYIYKS 153 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 YSG+YS+ DE + ++EV K D PV+W+EEE Y FRLS +++K+ + E Sbjct: 154 SYSGYYSITDECFIPENEVEKRNDKMVLKTTSQPVEWIEEENYMFRLSEFREKVKEWIEK 213 Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 + + P++ + + S +S +R WGI +PDDP +YVW+DAL NYLT Sbjct: 214 -TDVVYPVKYKTLALDSLTMEDDLSISRTRSRLSWGIPVPDDPSQTIYVWLDALVNYLTV 272 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 +GY K WP +IGKDI +FH YWPAFL++ANL LPKKVF HG L Sbjct: 273 SGY-----PQKQFVWPPTCQIIGKDITKFHLFYWPAFLMAANLSLPKKVFIHGHWLVDNV 327 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV++P E +++ + LRYFL+++ D + + +N+D+ N +GNL Sbjct: 328 KMSKSLGNVVNPNETMDKFTSEGLRYFLLKQGNPSSDCSFSWSSCLEMINSDMVNNVGNL 387 Query: 362 VSRS-VSMILK--DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 V+RS V+ I K +Y + E E ++ + ++ E + ++ + ++ Sbjct: 388 VNRSTVAKINKSGEYPKVESLESKVKEDTEKLMEMLEESYEKCIELYNEMMYYKVIEHLM 447 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 ++ E +R F +PW K+TN +R +VLYVT E IR ++ILLQ PK+A D L Sbjct: 448 LIMKEANRVFQLSQPW--KETNSERLESVLYVTYETIRVVSILLQPITPKMAAFCLDRLG 505 Query: 479 VADENR 484 V E R Sbjct: 506 VKAEKR 511 >gi|302684835|ref|XP_003032098.1| hypothetical protein SCHCODRAFT_15714 [Schizophyllum commune H4-8] gi|300105791|gb|EFI97195.1| hypothetical protein SCHCODRAFT_15714 [Schizophyllum commune H4-8] Length = 539 Score = 312 bits (800), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 185/509 (36%), Positives = 273/509 (53%), Gaps = 52/509 (10%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAAQNA 65 YI+T I YPNA PHIGH Y ++IAD+ AR+ RL + F GTDEHG KI +AA+ Sbjct: 30 YITTPIFYPNAVPHIGHLYSLVIADIFARYSRLRHPEKPTYFLAGTDEHGIKIQRAAEAR 89 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G F D S FR ++ DISY F+RTT ++HH +WK++ +KG IYK Y+ Sbjct: 90 GEEPLAFCDTLSAQFRRLSQAADISYTVFMRTTSEQHHRAVVDVWKRLDEKGLIYKAAYA 149 Query: 126 GWYSLRDEAYYNDDEVYKGADGQ-------YYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 GWYS+ DE +Y D +V D + N V+W EE Y FRLSA+QD LL Sbjct: 150 GWYSVSDECFYTDAQVESVPDPKDPTKTIMISTETKNAVEWSSEENYMFRLSAFQDALLK 209 Query: 179 YYESH---------PEFILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQY 226 +Y++ P I P + +++ +++ L DLS+SR WG+ +P DP++ Sbjct: 210 HYKNSADANGTRPLPTRIYPPQAHAQIVDILENAPLADLSISRPRSRLSWGVPVPGDPEH 269 Query: 227 IMYVWIDALTNYLTTTGYLDNPD-------GSKAKF-WPADLHVIGKDILRFHAIYWPAF 278 +YVW DAL YL+ GY D G+ A+ WP +L VIGKDILRFHA+Y PA Sbjct: 270 SIYVWFDALLVYLSGVGYPFKQDAAGVFDQGAIARSGWPPNLQVIGKDILRFHALYLPAV 329 Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 L++ N PLP ++ SHG +G K+SKSLGNV DP + +E GVD +RY+L R GK Sbjct: 330 LVALNFPLPGRLLSHGHWTVEGRKMSKSLGNVADPFDAMERHGVDCVRYYLAR--VGGK- 386 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398 F D G + A G + V L D + + ++ + Sbjct: 387 -FRDDVG-------EYAMGYHTALCILVLSALATDDPL-----------RELHTIAKALP 427 Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 +++ E + + + A+ + + +++ F P++ K T+P+ A + V+V+++R + Sbjct: 428 EQVEERLLDMDVAGAITHITEALKLLNKIFGDVAPFQ-KTTSPEAAYNLHVVSVDLLRVV 486 Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQ 487 + LQ F PK A + D L V + R +Q Sbjct: 487 GVCLQPFAPKAAGVLLDALRVPEGKRSWQ 515 >gi|116250771|ref|YP_766609.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] gi|115255419|emb|CAK06495.1| putative methionyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] Length = 514 Score = 312 bits (799), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 174/483 (36%), Positives = 271/483 (56%), Gaps = 27/483 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+YI+T+I Y NA PH+G A E++ AD AR RL G D+ F GTD++ K ++A+ A Sbjct: 3 KIYITTSIPYVNAAPHVGFALELVQADAYARHFRLLGHDIRFQCGTDDNSLKNVRSAEAA 62 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC-RILWKKISDKGDIYKGCY 124 GV K FVD N+ F + +LDIS ++F+RT+ H C LW+ + KGD+Y+ Y Sbjct: 63 GVQVKDFVDANAYRFEHLGGLLDISNEEFVRTSHDPRHIACVHALWRACAGKGDLYRKAY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + E +Y E+ G ++ A ++ + EE +FFRLS Y D+L+ E+ Sbjct: 123 EGLYCVGCEQFYEPSELDDGRCPEHGIA----LETIREENWFFRLSRYGDRLIELIETGE 178 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 I+P RRNE+++ ++ GL D+S+SR + WG+ IPD + ++YVW DAL NYLT Sbjct: 179 LRIVPAHRRNEILALLRRGLTDISVSRSAERARGWGVPIPDGDE-VVYVWFDALANYLTG 237 Query: 242 TGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 G+ + + ++W +HV+GK I +FHAIYWPA LLSA LP P + HG++ Sbjct: 238 LGHGSD-ETLLQRYWNDGQRIHVVGKGISKFHAIYWPAILLSAGLPPPSSILVHGYVTVD 296 Query: 300 GEKISKSLGNVIDPIEVIEEVGV-DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 G KI KS GN IDP +I+ G DALRY+L+R I G DG + + L+ + +LA + Sbjct: 297 GRKIGKSAGNGIDPERIIQTYGTPDALRYYLLRHIRSGDDGDFSAERLEAAWSGELAGQL 356 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNL +R ++++ + G++P D + + +R+ ++ E +H LA + Sbjct: 357 GNLANRVLALLSTSFGGIVP-----PVPDSAFVDEAARLPGKVAEAFDAYELHVGLADIF 411 Query: 419 SLVSEVDRYFDAQKPWELKK------TNPDRASTVLYVTVEVIRQ---LAILLQAFVPKL 469 + + E +R F PW K T DR +T ++ + Q LA++ + +P L Sbjct: 412 AFIGEANRRFTKGAPWADAKALLADLTPEDRRATAARLSACLAEQVYGLAVVARCLLPFL 471 Query: 470 ANK 472 + Sbjct: 472 PSS 474 >gi|78779318|ref|YP_397430.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312] gi|78712817|gb|ABB49994.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312] Length = 511 Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 176/458 (38%), Positives = 256/458 (55%), Gaps = 20/458 (4%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+T + Y N +PH+G Y II D +AR+ RL G DV+F TG DEHG KI + A G+ Sbjct: 5 ITTPLYYVNDKPHLGSVYTTIICDSIARYKRLVGEDVIFITGVDEHGLKIQRTANEKGIE 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 K D+ S F +IS+D FIRT+ K H ++++ DIY G GWY Sbjct: 65 PKSHCDEISEVFNINWKNWNISFDKFIRTSSKNHEFVVNEFYERVKSSDDIYMGVQKGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 + E + ++ E Y H ++W EE FFRLS YQ K + + P FI Sbjct: 125 CVGCEEFKDNPE----NSSTYKCPIHQKNLEWKNEENLFFRLSKYQ-KEIEKIINEPSFI 179 Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 PIER+NE+I+FV GLKD S+SR WGI +P + YVW DAL Y++ D Sbjct: 180 EPIERKNEIINFVSRGLKDFSISRTNVSWGIPVPGYDNHTFYVWFDALLGYVSAISS-DT 238 Query: 248 PDGSKAKF----WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 D S + WPAD+H+IGKDILRFHA+YWPA L+SAN+ +PKKVF HGF+ +G+K+ Sbjct: 239 SDNSLERSINGGWPADVHLIGKDILRFHAVYWPAMLISANMKVPKKVFGHGFLTREGQKM 298 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 KSLGNV+DP ++ + G D +R++L+++I+ G DG + +N DLAN IGNL++ Sbjct: 299 GKSLGNVLDPDLLLSKYGNDPVRWYLIKDISLGNDGDFQHKRFVDIINNDLANTIGNLLN 358 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR---ALAQVISL 420 R+ SM K + +P ++ L +++ ++ + N I++ A +V+SL Sbjct: 359 RTSSMSRKWFGNKVPNNENIINENK--LENYAKI--SVKNYIHNFDIYKLDLAANEVLSL 414 Query: 421 VSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIR 456 + Y + +PW L K N ++Y +E R Sbjct: 415 AINTNLYLNDNQPWMLIKEIDNLPLVKEIIYNVLESTR 452 >gi|254583406|ref|XP_002497271.1| ZYRO0F01716p [Zygosaccharomyces rouxii] gi|238940164|emb|CAR28338.1| ZYRO0F01716p [Zygosaccharomyces rouxii] Length = 552 Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 180/516 (34%), Positives = 283/516 (54%), Gaps = 36/516 (6%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 ++ R +++T I YPNA+PH+GH Y +I DV R+ L G + LFTTGTDEHG KI Sbjct: 8 IQRRLVSHVTTPIFYPNAKPHLGHLYSSLICDVFHRWKTLQGEENLFTTGTDEHGLKIQL 67 Query: 61 AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A++ G K FVD+ +F + ++++ FIRTT+ H + R LW G I Sbjct: 68 ASERNGFQNPKQFVDKLYDDFITLDKAFNVNFTRFIRTTDTDHINNVRKLWNLCDKNGFI 127 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGA--DGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKL 176 Y+G + GWYS+ DE +Y + +V + G+Y N + +N V + E+ +FF+LS + D+L Sbjct: 128 YQGEHKGWYSISDETFYPESKVIEDPVNTGKYLNTETNNEVVYHSEKNHFFKLSHFNDQL 187 Query: 177 LSYYESHPEFILPIERRNEVISFVKSG-LKDLSLSRKTF--DWGIKIPDDPQYIMYVWID 233 + Y ES+P+FI P +R ++++ +++ L+DLS+SR +F WGI +P DP MYVW D Sbjct: 188 IDYIESNPQFIYPEVKRVQILNELRNNRLQDLSISRPSFRLKWGIDVPGDPSQKMYVWFD 247 Query: 234 ALTNYLTTTGYLD-----NPDG----------SKAKFWPADLHVIGKDILRFHAIYWPAF 278 AL NYLT+ G +D P S +W HVIGKDI+RFH IYWP+F Sbjct: 248 ALCNYLTSIGGIDAIMNNEPHTKLLHTRKEIQSPRDWWSNTTHVIGKDIIRFHTIYWPSF 307 Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 L++A LPLP++V H + G K+SKSLGNV+DP+ + + G D +R+FL+ +D Sbjct: 308 LMAAGLPLPRQVVVHSHWICNGMKMSKSLGNVVDPLLMKKHYGEDPMRWFLLENSQLEED 367 Query: 339 GFYDKDGLKKRVNADLANGIGNLVS----------RSVSMILKDYDGMIPTPGAFTESDE 388 G + + L + A+ GNLV+ R+V + ++ Sbjct: 368 GDFQESKLFS-LTEMFASKWGNLVNRCCGPKFNLQRAVQFYSDGRNPLLVNDDNLQAEVN 426 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 +++ S + + + M N AL V S++++ + + +PW P ++ Sbjct: 427 NLVKKLSNIPISMDKKMNNFQTASALRDVWSIINDTNAFMQNAEPW---TKGPAEQDAII 483 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 ++ +E R L+IL Q +P LA K+ D + V +NR Sbjct: 484 FLCMETSRILSILCQPIIPDLAAKLLDRIDVEKDNR 519 >gi|33865756|ref|NP_897315.1| methionyl-tRNA synthetase [Synechococcus sp. WH 8102] gi|33632926|emb|CAE07737.1| putative methionyl-tRNA synthetase [Synechococcus sp. WH 8102] Length = 514 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 172/458 (37%), Positives = 245/458 (53%), Gaps = 19/458 (4%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y N +PH+G Y + D LARF RL+G V+F TG DEHGQKI + A+ ++ Sbjct: 5 LTTPLYYVNDRPHLGSTYTTLACDALARFQRLNGKAVVFITGVDEHGQKIQRTAEARQLS 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D S ++RD+ IS D F+RTT+ RH + ++ GD+ G +GWY Sbjct: 65 PQQHCDAISGSYRDLWSRWGISQDRFVRTTDPRHLQLVDQFFARVKGSGDVISGRQTGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E Y +D A P++W +EE FFRLS YQ ++ + +FI Sbjct: 125 CVGCEEYKDDS---AEAVDPSCPIHQKPLEWRDEENLFFRLSHYQSQIEELV-ARDDFIQ 180 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P RR EV +FV GL+D S+SR WG+ +P + YVW DAL YLT LD Sbjct: 181 PANRRQEVRNFVAQGLRDFSISRVNVSWGLPVPGHEGHTFYVWFDALLGYLTA--LLD-- 236 Query: 249 DGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 DG WPA +HVIGKDILRFHA++WPA L+SA LPLPK VF HGF+ +G Sbjct: 237 DGGPVALERLEQCGWPASVHVIGKDILRFHAVFWPAMLMSAGLPLPKTVFGHGFLTREGL 296 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+ KSLGNV+DP ++E G DA+R++L+R+I G DG + + VN DLAN IGNL Sbjct: 297 KMGKSLGNVLDPERLLERCGSDAVRWYLLRDIQFGDDGDFQQQRFVDLVNNDLANTIGNL 356 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++R+ SM K + +P + + + + +M + A V+ L Sbjct: 357 LNRTSSMARKWFADAVPPHTDAVGPHHPLAVAANTAVTTVLTSMPSLGFKPAAEAVLQLA 416 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTV---LYVTVEVIR 456 + + + PW K P + + V LY +E R Sbjct: 417 IAANGHLNDTAPWSRMK-QPGKEAEVGDDLYAVLEATR 453 >gi|322801003|gb|EFZ21784.1| hypothetical protein SINV_04670 [Solenopsis invicta] Length = 612 Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 185/534 (34%), Positives = 278/534 (52%), Gaps = 60/534 (11%) Query: 8 YISTAIAYPNAQ----------------PHIGHAYEMIIADVLARFHRLDGLDVLFTTGT 51 YI+T I Y NA PHIGH Y ++AD +AR++ + G + FTTGT Sbjct: 53 YITTPIFYVNAGTLSYYNRKVKYIFLLGPHIGHLYSAVLADAVARYNNMLGHKIFFTTGT 112 Query: 52 DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILW- 110 DEHG KI AA AG+ + Q S+ F++M D ++ Y FIRTTEKRH D W Sbjct: 113 DEHGNKIKTAAAAAGLPNLEYCTQISQQFKEMCDRFEVDYSRFIRTTEKRHCDAVYHFWV 172 Query: 111 -------------------KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG---- 147 K++ +KG IY G YSGWY + DEA+ +D ++ + D Sbjct: 173 LRTNLFLTSTSFAISCVTHKRLEEKGHIYLGKYSGWYCVSDEAFLSDADLIEQKDSTGKI 232 Query: 148 -QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--L 204 + N V+W EEE Y FRLSA+QD L Y+ + P + +V+ G L Sbjct: 233 IKVSAESGNTVEWTEEENYKFRLSAFQDDL-KYWLKDENTVKPALYHKTLSQWVEEGVCL 291 Query: 205 KDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262 +DLS++R W + P D + +YVW+DAL NYLT GY P+ S +FWP ++ V Sbjct: 292 QDLSITRLRNKVPWAMPSPCDESHSIYVWMDALINYLTVLGY---PNESYKEFWPPNIQV 348 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 IGKDIL+FH IYWPAFL++A L PK + H +K+SKS+GNVI P + + Sbjct: 349 IGKDILKFHGIYWPAFLIAAGLEPPKTLLCHAHWTVDHKKMSKSIGNVISPFKAANDYSE 408 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 + LRYF++RE D Y + +N++LA+ +GNLVSR + P P Sbjct: 409 EGLRYFILREAVPQNDANYSSKKIVNILNSELADTLGNLVSRCAGKAVNP-SKEFPDPAK 467 Query: 383 FTESDESILSVCSR-----VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 + +S ++ +R V ++ R++ + +H + VIS++ ++ +PW+L+ Sbjct: 468 YWNVLQSQVADETREALKSVGEKARKSYEEYNLHHVVDAVISMLHCANKMVAYHEPWQLR 527 Query: 438 KTNPDRAS-----TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 K D S V+ + +E R A++L +P+L++ + D L + ENR + Sbjct: 528 KQVDDANSIEELKAVISLALESSRIGALILYPIIPRLSSSLLDFLNIPKENRMW 581 >gi|307946518|ref|ZP_07661853.1| methionyl-tRNA synthetase [Roseibium sp. TrichSKD4] gi|307770182|gb|EFO29408.1| methionyl-tRNA synthetase [Roseibium sp. TrichSKD4] Length = 510 Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 178/509 (34%), Positives = 274/509 (53%), Gaps = 11/509 (2%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K YI+T I Y N PHIGHAY I+AD++ R G +++ +TG DEHGQK +AA Sbjct: 2 KSYITTPIYYVNGSPHIGHAYTSIVADIMKRNRTALGYEMMLSTGVDEHGQKNQEAAAAL 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ ++D + FR++ D+ D+ YD F+RT+ H + + I DK I K Y+ Sbjct: 62 GMDAAAYLDMRCKEFREVFDLFDVDYDYFVRTSRDGHKQAVAAMEQTIFDKDLIVKKEYT 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y E + D ++ + DG+ ++ +E YF ++ ++++LL + E +P+ Sbjct: 122 GKYCKGCEEFKRDTDLTE--DGKCALHPTMEIEESKEVNYFLKMEPFRERLLQHIEDNPD 179 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 F+ P RNE+ + L+DL +SR G+ +P DP ++ YVW DAL NYLT Sbjct: 180 FVQPKAFRNELKQMLSEPLEDLCISRPKARVTLGVNLPFDPDFVTYVWFDALANYLTNIN 239 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG-FILHKGEK 302 + PDG + +W H+IGKDIL+ H +YWP L++A LPLPKK+ H + G K Sbjct: 240 W---PDGDYSAWWAECEHLIGKDILKPHGVYWPIMLMAAGLPLPKKLSVHSHWTGEGGVK 296 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS+GNV+DP EV++ +GVDALR++L R + D + +++ N +L N IGNL+ Sbjct: 297 MSKSIGNVVDPNEVMDLMGVDALRWYLARHMRADSDSQISVELIRQTYNGELGNKIGNLL 356 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SR K++DG +PTPGA + DE++ E + I + ++S Sbjct: 357 SRVAKFSNKNFDGKVPTPGALSAEDEALRKQVLEATSGFGEWINMPDIPARIQALVSAAD 416 Query: 423 EVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++ Y D Q PW L K +R +TVLYV ++ R L L +P A K +L V Sbjct: 417 AMNEYIDQQAPWSLFKNEETRERCATVLYVALDCQRILFEALMQVIPASATKALAMLNVP 476 Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 +++ +L PG +FPR Sbjct: 477 APAAPWKAELDKL-PGGNTLGELTSLFPR 504 >gi|74005480|ref|XP_850573.1| PREDICTED: similar to methionine-tRNA synthetase 2 precursor [Canis familiaris] Length = 593 Score = 309 bits (792), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 179/511 (35%), Positives = 270/511 (52%), Gaps = 30/511 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKAA 62 + + +T I Y NA PHIGH Y ++AD L R RL F+TGTDEHG KI +AA Sbjct: 44 RAFFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPSAAATRFSTGTDEHGLKIQQAA 103 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ D+ S F+ + +S DF+RTTE RH + W + +G +YKG Sbjct: 104 AAAGLAPAELCDRVSAQFQQLFREAGVSSTDFVRTTEARHRVAVQHFWGLLEARGLLYKG 163 Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177 Y GWY +E + + +V + G G +PV W +EE Y FRLS +++ L Sbjct: 164 LYEGWYCASEECFLPEAKVTRQPGPSGDACPVSLESGHPVSWTKEENYIFRLSQFREPLR 223 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235 + P+ + P R V+ +++ L DLS+SR++ WGI +P D +YVW+DAL Sbjct: 224 RWLRDDPQAVTPEPFRLAVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 283 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NYLT GY P+ +WPA H+IGKDIL+FHAIYWPA LL A + P +++ H Sbjct: 284 VNYLTVIGY---PNAEFRAWWPATSHIIGKDILKFHAIYWPALLLGAGMSPPHRIYVHSH 340 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 G+K+SKSLGNV+DP ++ VD RYFL+R+ D Y + + K ++++LA Sbjct: 341 WTVCGQKMSKSLGNVVDPKTCLDRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELA 400 Query: 356 NGIGNLVSRSVSMILKD--------YDGMIPTPGAFTES------DESILSVCSRVLQEI 401 + +G L++R + + + P PG S D ++++ + + +++ Sbjct: 401 DALGGLLNRCTANRINPSGTYPVFCANCFPPAPGVAGPSARAQAEDYALVNAVATLPRQV 460 Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458 E+ N I++AL V S V + + + PW+L +P A TVL+V +E +R Sbjct: 461 AEHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLSWESPVDAPWLGTVLHVALECLRVF 520 Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489 LLQ P LA+K+ L V+ R L Sbjct: 521 GTLLQPVTPSLADKLLSRLGVSATERGLGEL 551 >gi|241956003|ref|XP_002420722.1| mitochondrial methionyl-tRNA synthetase, putative [Candida dubliniensis CD36] gi|223644064|emb|CAX41807.1| mitochondrial methionyl-tRNA synthetase, putative [Candida dubliniensis CD36] Length = 577 Score = 309 bits (791), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 194/545 (35%), Positives = 298/545 (54%), Gaps = 53/545 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-GLDVLFTTGTDEHGQKIAK 60 K + YI+T I Y NA PHIGH Y M+IAD ++ +L+ + TGTDEHG KI Sbjct: 15 KSTKPFYITTPIFYVNAAPHIGHLYSMLIADTRNKWEKLNPSKESFMLTGTDEHGLKIQS 74 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+ K VD+ S+NF +A+ +++YD FIRTT+ H D R W + ++G IY Sbjct: 75 TAEKLGLEPKTLVDKVSQNFSKLAEQFNVNYDRFIRTTDDDHIDLVRYFWNLMMERGFIY 134 Query: 121 KGCYSGWYSLRDEAYYND---DEVYK-GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 +SGWYS+ DE ++ + +EV K G + + N V + EE YFF+LS +Q +L Sbjct: 135 TDTHSGWYSISDETFFPETQIEEVVKNGKVVKISSETKNEVVYQEETNYFFKLSLFQKQL 194 Query: 177 LSYYESHPEFILPIERRNEVISFVK-SGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233 + + + +PEFI P R ++ ++ + L DLS+SR + W I++P+D +YVW D Sbjct: 195 IQFLKQNPEFIKPTHRYQFILKELEDTKLPDLSISRPSSRLKWSIEVPNDNTQKIYVWFD 254 Query: 234 ALTNYLTTTGYLDNPDGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 AL NYLT T + + + +K+ WPA HVIGKDI+RFH IYWP FL++A + L Sbjct: 255 ALLNYLTATEFPQDFEVKDSKYITPENSIWPA-THVIGKDIIRFHCIYWPIFLMAAGIEL 313 Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 PK+V H L G K+SKSLGNV+DP+E+ E GVD +R+FLV D + ++ L Sbjct: 314 PKQVIVHSHWLCDGFKMSKSLGNVVDPMEISEYYGVDPVRFFLVENSNIDDDCKFSEELL 373 Query: 347 KKRVNADLANGIGNLVSR------SVSMILKDYDG--------MIPTPGAFTESDESILS 392 ++ +A L NL+SR S+ +K G +I T +S + +LS Sbjct: 374 QRSRDAVLGK-YCNLISRIGGKNFSIEEAVKSCAGGEFNNIREIIETCTINKDSVDGLLS 432 Query: 393 VCSRVLQEIRENMQNQLIH--------RALAQVISLVSEVDRYFDAQKPWELKK--TNPD 442 S++ ++ + + NQ+ H RA+ S++++ ++ F +PW K +PD Sbjct: 433 SSSKLTTDLND-LYNQMDHYFTNFEYIRAIQSWWSVINQANQIFQNAEPWTYVKLINSPD 491 Query: 443 RASTV-----------LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491 + + +Y+ E R +IL+Q +P+L+ KI D L V+ F +L Sbjct: 492 TPAELKEKYRVLTNYFVYLCGETARISSILIQPVMPQLSKKILDRLDVSGRTSDFATLGA 551 Query: 492 RLKPG 496 LK G Sbjct: 552 DLKYG 556 >gi|241203365|ref|YP_002974461.1| tRNA synthetase class I (M) [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857255|gb|ACS54922.1| tRNA synthetase class I (M) [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 514 Score = 309 bits (791), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 176/492 (35%), Positives = 273/492 (55%), Gaps = 30/492 (6%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 +YI+T+I Y NA PH+G A E++ AD AR RL G DV F GTD++ K ++A+ AG Sbjct: 4 IYITTSIPYVNAAPHVGFALELVQADAYARHFRLLGQDVRFQCGTDDNSLKNVRSAEAAG 63 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC-RILWKKISDKGDIYKGCYS 125 + K FVD N+ F + +LDIS ++F+RT+ H C LW+ + GD+Y+ Y Sbjct: 64 LPVKDFVDANADRFERLGGLLDISNEEFVRTSRDPRHIACVHALWRACAGHGDLYRKAYE 123 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G Y + E +Y E+ G ++ A ++ + EE +FFRLS Y D+L+ ES Sbjct: 124 GLYCVGCEQFYEPSELDDGRCPEHGIA----LETIREENWFFRLSRYGDRLIELVESGEL 179 Query: 186 FILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 I+P RRNEV++ ++ GL D+S+SR + WG+ +PD+ + ++YVW DAL NYLT Sbjct: 180 RIVPAHRRNEVLALLRRGLTDISVSRSAERARGWGVPVPDEDE-VVYVWFDALANYLTGL 238 Query: 243 GYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 + + + ++W +HV+GK I +FHAIYWPA LLSA LP P + HG++ G Sbjct: 239 SHGSD-ETLLPRYWNGGQRIHVVGKGISKFHAIYWPAILLSAGLPPPSSILVHGYVTVDG 297 Query: 301 EKISKSLGNVIDPIEVIEEVGV-DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 +KI KS GN IDP +I+ DALRY+L+R I DG + + L+ + +LA +G Sbjct: 298 KKIGKSAGNGIDPERIIQSYATPDALRYYLLRHIRSADDGDFSAERLEAAWSGELAGQLG 357 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL +R ++++ +DG++P D + + +R+ ++ E +H LA + + Sbjct: 358 NLANRVLALLSTSFDGIVP-----PVPDSAFVEEAARLPAKVAEAFDAYELHVGLADIFA 412 Query: 420 LVSEVDRYFDAQKPWELKK------TNPDRASTVLYVTVEVIRQ---LAIL---LQAFVP 467 + E +R F + PW K T DR +T + + Q LAI+ L F+P Sbjct: 413 FIGEANRRFTKRAPWADAKALLADLTPEDRKATAARLGSSLAEQVYGLAIIARCLLPFLP 472 Query: 468 KLANKIFDILFV 479 A K+ L + Sbjct: 473 SSATKLHSRLGI 484 >gi|322706456|gb|EFY98036.1| methionyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23] Length = 589 Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 186/523 (35%), Positives = 274/523 (52%), Gaps = 43/523 (8%) Query: 28 MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87 M++ADVL R+ ++ G + F TGTDEHG KI +AA G+ K F D S FR++A Sbjct: 1 MVLADVLKRWQQIKGKETFFLTGTDEHGMKIQRAAAKEGIAPKEFCDNYSNKFRELAAAG 60 Query: 88 DISYDDFIRTTEKRHHDTCR----ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-- 141 DIS+D FIRTT+ H + L + + +YKG + GWY++ DE +Y +D V Sbjct: 61 DISHDAFIRTTDLEHKEAVSEFLLQLKHTLPEHLGLYKGTHEGWYAVSDECFYPEDLVRP 120 Query: 142 ----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197 G + + V+W++EE +FF L+ Y+D LL +Y+ +P +I P R NEV Sbjct: 121 DIVPQTGKKIMVSDETGSEVEWVKEETWFFPLTKYKDALLKFYDENPNWITPAHRMNEVR 180 Query: 198 SFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KA 253 ++V++ L+DLS++R WGI P+D +YVW+DAL NY+T GY S Sbjct: 181 NWVENHLEDLSITRPAARLSWGIPDPEDRSQTIYVWVDALINYITQAGYGRKWHSSSDNM 240 Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 WPADL +IGKDILRFHAIYWPA L++ NLPLPK++ H K+SKSLGNV++P Sbjct: 241 GLWPADLQIIGKDILRFHAIYWPALLMALNLPLPKQLLCHNHWTMSNRKMSKSLGNVVNP 300 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR----SVSMI 369 ++ +D LRYFL+R + KD Y + +L IGNL+ R V+ Sbjct: 301 FFAVQRWDIDPLRYFLMRNGSFTKDMSYSNQLIGSVYAKELQANIGNLLYRIARPKVTSK 360 Query: 370 LKDYDGMIP-TPGAFTE-----SDESILSV---CSRVLQEIRENMQNQLIHRALAQVISL 420 + + GAF E S + +S+ ++ E M+ A+ +V +L Sbjct: 361 WSTLEAVTAFRQGAFEEIPDHTSQQPFVSLDDHLEKIPSAYYEEMEKYNTGGAIREVFNL 420 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVL-----YVTVEVIRQLAILLQAFVPKLANKIFD 475 + E +RY +PW L K NP+ S +L Y E +R ILLQ +P A+ + + Sbjct: 421 LRETNRYVSDTEPWNLVK-NPNPQSRILLNLVIYNCAEALRIAGILLQPIMPTKASLLLN 479 Query: 476 ILFVADENRCFQSLDQRLKPGFMLH----------KTFDPIFP 508 L V ++ R + + P + K +D IFP Sbjct: 480 ELGVREDRRTLEFASKGKDPEYGTEAQTGDSAARLKKWDTIFP 522 >gi|255711230|ref|XP_002551898.1| KLTH0B02486p [Lachancea thermotolerans] gi|238933276|emb|CAR21460.1| KLTH0B02486p [Lachancea thermotolerans] Length = 621 Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 186/529 (35%), Positives = 285/529 (53%), Gaps = 55/529 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 +I+T I YPNA+PH+GH Y ++ DV R+ + G + LFTTGTDEHG KI A++ G Sbjct: 62 FHITTPIFYPNARPHLGHLYSSLLCDVTKRWRAMQGYNTLFTTGTDEHGLKIQNASEKNG 121 Query: 67 VTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + K FVD R F + + +ISY FIRTT+ H R LW + + G IYKG + Sbjct: 122 YSNPKQFVDVLYREFVKLDQMANISYTRFIRTTDYDHVRAVRELWNRCWESGYIYKGEHE 181 Query: 126 GWYSLRDEAYYNDDEVYK---------------GADGQYYNAQ-HNPVQWMEEEGYFFRL 169 GWYS+ DE +Y + +V + DG++ N + N V + E YFF+L Sbjct: 182 GWYSISDECFYPESKVVQLQGDGQELPFGSPEIRKDGKFINTETRNGVVYHSETNYFFKL 241 Query: 170 SAYQDKLLSYYE-SHPEFILPIERRNEVISFVK-SGLKDLSLSRKT--FDWGIKIPDDPQ 225 S++Q++LL++ E +P FI P RR+++I+ ++ S L+DLS+SR + WGI +P DP Sbjct: 242 SSFQNRLLTFLEKENPHFISPPSRRDQIINELRGSKLRDLSISRPSSRIKWGIDVPQDPS 301 Query: 226 YIMYVWIDALTNYLTTTG----YLDNPDGS-----------KAKFWPADLHVIGKDILRF 270 +YVW DAL NYLT+ G LDN + +W H+IGKDI +F Sbjct: 302 QKIYVWFDALCNYLTSVGGLQAVLDNSPAAVKHTITSQLKMPRNWWVNTTHIIGKDIAKF 361 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 HAIYWP FL++A +PLPK++ HG L G K+SKS+GNV+DP+++I D +R++L+ Sbjct: 362 HAIYWPCFLMAAGIPLPKQIIVHGHWLSGGVKMSKSVGNVVDPLDMILHYECDPVRWYLL 421 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS------MILKDYDGMIPTPG--- 381 DG + ++ L + + GNL++R S ++ + P Sbjct: 422 ENSHIEADGDFREERLHA-TREQIVSKWGNLLNRCCSNKFNIPRAVETFASQAANPENNA 480 Query: 382 ---AFTESDESILSVCS--RVLQEIRENMQNQLIHR-ALAQVISLVSEVDRYFDAQKPWE 435 TE+ ES + + L E+ + QL R AL + ++ + + + PW Sbjct: 481 ATLIGTEAQESYRELIQLLQTLPELFSSHMRQLETRSALKLLWDVIGKANAFVQTSTPW- 539 Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 LK + +++ +EV+R +IL Q +P L+N + D + V ENR Sbjct: 540 LKSG--EEQDLIIFTAIEVVRITSILAQPIMPTLSNALLDRIGVDTENR 586 >gi|45184691|ref|NP_982409.1| AAL133Wp [Ashbya gossypii ATCC 10895] gi|44980037|gb|AAS50233.1| AAL133Wp [Ashbya gossypii ATCC 10895] Length = 567 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 190/533 (35%), Positives = 286/533 (53%), Gaps = 50/533 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 ++ +K +I+T I YPNA+PH+GH Y +I DV AR+ +L +VLFTTGTDEHG KI Sbjct: 9 LRAIQKFHITTPIFYPNAKPHLGHLYSSLICDVQARWQKLRDSEVLFTTGTDEHGLKIQT 68 Query: 61 AAQNAG-VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A++ G + KVFVD+ +F + + +I Y FIRTT+K H LW+ G I Sbjct: 69 ASEQQGYASPKVFVDKLCTHFISLDEQANIGYTRFIRTTDKDHISNVLRLWELCKANGYI 128 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADG---------------QYYNAQ-HNPVQWMEEE 163 YKG +SGWYS+ DE +Y +V + DG +Y N + N V E Sbjct: 129 YKGEHSGWYSVSDETFYPATKVVQVIDGREFPVMDGSTVTEGAEYINTETRNRVIHQTEV 188 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSR-KT-FDWGIKI 220 YFFRLS+++++L+S+ + +P FILP R +++ + K+ L DLS+SR KT WGI + Sbjct: 189 NYFFRLSSFRERLISHLKENPGFILPPSRSAQILDLLLKAELPDLSISRPKTRLKWGISV 248 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLD------------------NPDGSKAKFWPADLHV 262 P D +YVW DAL NY+T+ G +D + GS ++W A H+ Sbjct: 249 PGDESQKIYVWFDALCNYVTSIGGVDAVLEDRPIANLVHSIPQGSVSGSSKEWWNATTHL 308 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 +GKDI++FH IYWPA LL+A LPLP+KV HG L G K+SKSLGNV+ P E+IE+ Sbjct: 309 VGKDIVKFHTIYWPAILLAAGLPLPEKVVVHGHWLSDGVKMSKSLGNVVVPEEMIEKYDT 368 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-----I 377 D +R+F++ D + ++GL + L + GNL+ R + + Sbjct: 369 DPMRWFILEHDTIEHDASFSEEGLCQ-TRELLCSKWGNLLHRCGGPKFNIHRAVQKFHHK 427 Query: 378 PTPGAFTESDE---SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 P + E ++LS + + EI + + AL + S++++ + +PW Sbjct: 428 PITDLTKNNPELYGNLLSRLTTLADEIDQLLSKYDTANALRLIWSIINDANMVVQHGEPW 487 Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487 K + ++Y VE R ++I Q F+P LAN+ D L V + R + Sbjct: 488 ---KKPLEEQDLIIYTAVEAARIVSIAAQPFIPVLANRFLDRLDVHFDKRSLE 537 >gi|30962531|dbj|BAC76732.1| methionyl-tRNA synthetase (mitochondrial) [Caenorhabditis elegans] Length = 500 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 179/486 (36%), Positives = 272/486 (55%), Gaps = 26/486 (5%) Query: 19 QPHIGHAYEMIIADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76 +PHIGHAY ++ DV R++RL G F+ GTDEHG KI +AA A T K F D+ Sbjct: 1 EPHIGHAYTAVLCDVAHRWNRLKHPGAQAQFSIGTDEHGSKIFQAALAAKSTPKQFCDRV 60 Query: 77 SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYY 136 S F D+ L++S+ +FIRTT+ H + + W KI D G IYK YSG+YS+ DE + Sbjct: 61 SSKFSDLFTDLELSHTNFIRTTDPAHLEAVQHFWMKIQDNGYIYKSTYSGYYSITDECFI 120 Query: 137 NDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191 +++V K GA+ + PV+W+EEE Y FRLS +++K+ + + P + Sbjct: 121 PEEDVVKKIVEGGAEKLTLKSNGTPVEWIEEENYMFRLSEFREKVAEWINRENIVVHPSK 180 Query: 192 RRN-EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250 ++ + S S +S SR WGI +P+DP +YVW+DAL NYLT TG+ P+ Sbjct: 181 YKSLALTSLEMSEDLSISRSRSRLSWGIPVPNDPTQTIYVWLDALVNYLTVTGF---PNA 237 Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310 WP VIGKDI +FH YWPAFL++A L LP+KVF HG L K+SKSLGNV Sbjct: 238 QSV--WPPTCQVIGKDITKFHLYYWPAFLMAAGLSLPQKVFIHGHWLIDNVKMSKSLGNV 295 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMI 369 ++P E I + + LRYFL++ D ++ + + +N+DL N +GNL++RS V I Sbjct: 296 VNPSEAITKFTAEGLRYFLLKHGNPSYDCSFNWNSCLQTINSDLVNNVGNLLNRSTVEKI 355 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-------IHRALAQVISLVS 422 K +GM P + + I ++++ + E+ +N + + + ++ + Sbjct: 356 NK--EGMYPK-MEIEDIEAEIRENAKKLMEMVEESRENCVDLYDEMSYFKIIENLMLTMK 412 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 E +R F + +PW K+ + R ++L+VT + IR + ILLQ PK+A + L V Sbjct: 413 EANRLFQSSQPW--KEIDEKRLKSLLFVTYDTIRVVTILLQPITPKMAEFCLNRLGVPKN 470 Query: 483 NRCFQS 488 R ++ Sbjct: 471 ERNLEN 476 >gi|156844126|ref|XP_001645127.1| hypothetical protein Kpol_538p29 [Vanderwaltozyma polyspora DSM 70294] gi|156115784|gb|EDO17269.1| hypothetical protein Kpol_538p29 [Vanderwaltozyma polyspora DSM 70294] Length = 570 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 175/523 (33%), Positives = 294/523 (56%), Gaps = 47/523 (8%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++T I YPNA+PH+GH Y ++ DV R+ G LFTTGTDEHG KI A+Q AG Sbjct: 21 HVTTPIFYPNAKPHLGHLYSSLLCDVQHRWQLAKGNQSLFTTGTDEHGIKIQTASQKAGF 80 Query: 68 T-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + + FV+ F + DI + FIRTT++ H + ++LWK D G IYKG + G Sbjct: 81 SDPREFVNTLYPEFIKLNKNCDIEFTRFIRTTDQDHIENVKVLWKTCWDNGYIYKGEHKG 140 Query: 127 WYSLRDEAYYNDDEVYKGAD--GQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 WYS+ DE +Y + +V K + G+Y N + +N V E YFF+LSA++++L+ Y E H Sbjct: 141 WYSISDETFYPESKVIKDPNNPGKYINTETNNEVVHQSESNYFFKLSAFRERLIDYIEKH 200 Query: 184 PEFILPIERRNEVISFVKS--GLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239 P++I P +++++++ +KS G++DLS+SR +WGI++P+DP +YVW DAL NY+ Sbjct: 201 PQYIYPKSKKDQILNELKSSTGMQDLSISRPVSRLEWGIEVPNDPDQKIYVWFDALCNYM 260 Query: 240 TTTGYLDN-----PDGSK--------------AKFWPADLHVIGKDILRFHAIYWPAFLL 280 ++ G +++ P S+ + W HVIGKDI++FH IYWP+FL+ Sbjct: 261 SSLGNIESIRNNIPVTSQHNLGGVNNVELKEPLELWKNTTHVIGKDIIKFHTIYWPSFLM 320 Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +A+LP+ K+V H L G K+SKSLGNV+DPI+++E G D+LR+FL+ +DG Sbjct: 321 AASLPINKQVIVHSHWLCNGVKMSKSLGNVLDPIQMVEYYGADSLRWFLLENSQLEEDGD 380 Query: 341 YDKDGLKKRVNADLANGIGNLVSR------SVSMILKDYDGMIPTPGAFTE--SDESILS 392 + +D L + + GNL++R ++ + ++ + + DE + Sbjct: 381 FQEDKL-FMIRDMFVSKWGNLINRCCGTKFNIKRAVDEFSSKADVESSILQLFEDEQDMK 439 Query: 393 V-CSRVLQEIRE--NMQNQLIHR-----ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 + + + ++E N+ ++ I++ L + S++S+ + KPW + D Sbjct: 440 IQIENIFKNLKELPNLMDEKINKFEFAQLLRNIWSILSDANTLMQDAKPWTREGIKQD-- 497 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487 +++ E R L+IL +P+L+ + + V E + ++ Sbjct: 498 -AIIFTCTETSRILSILCAPLIPRLSISFLNRIDVPKECQTYK 539 >gi|320100795|ref|YP_004176387.1| methionyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162] gi|319753147|gb|ADV64905.1| methionyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162] Length = 514 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 181/476 (38%), Positives = 272/476 (57%), Gaps = 17/476 (3%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E Y++T I YPNA PHIGHAY + ADVLARF+RL G +V F TG DEHG KI + A Sbjct: 5 EMNVFYVTTPIYYPNAPPHIGHAYTSVFADVLARFNRLIGNNVFFLTGNDEHGLKIQRVA 64 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + AG K FVD+ + +R+ L ISYD FIRTT+ H + + I KG IYK Sbjct: 65 EKAGKHPKEFVDEMASVYREYWRTLGISYDHFIRTTDPYHEKAVKEAFSYIHGKGLIYKA 124 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYE 181 YSG Y + E YY+ E Y DG+ + HN P++++EEE Y+F+LS ++D LL E Sbjct: 125 KYSGMYCVDCEKYYSPGE-YIEVDGKPHCPIHNKPLEYLEEETYYFKLSEFKDYLLDILE 183 Query: 182 SHPEFILPIERRNEVISFVKS-GLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238 + + + P + EV S +++ GL+D+S++R + WGI +P D +Y++YVW DAL NY Sbjct: 184 NK-DVVYPQQYAREVASKIRNEGLRDVSVARPVERVGWGIPVPFDDKYVIYVWFDALMNY 242 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 L+ GY D+ + + +W HVIGKDIL FH W + L + +LP P++V H ++++ Sbjct: 243 LSGVGYPDDKERLQL-YWSNAHHVIGKDILWFHTAVWFSILKALDLPPPRRVIVHSYLIN 301 Query: 299 KGEKISKSLGNVIDPIEVIEEV-GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 +G KI KS GNVI E++ G D +RY L R KD + L N++LA+ Sbjct: 302 RGLKIGKSAGNVISIEELVSRYNGSDGVRYLLARIFNTDKDSEVSFELLDSIYNSELADT 361 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 GNL R ++ +K +G + D+++ + + + ++M+N + +AL Sbjct: 362 YGNLARRVGTLSMKKMNGKVYRRSV----DKAVADLVATHVGAYIDSMKNYEVSKALEHA 417 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + + ++Y + KPWE K NP + LY +E+IR ILL +P + K+ Sbjct: 418 MEIARYANQYVNESKPWE--KPNPSKE---LYTLLELIRAATILLHPVIPSASLKL 468 >gi|309808504|ref|ZP_07702403.1| methionine--tRNA ligase [Lactobacillus iners LactinV 01V1-a] gi|308168332|gb|EFO70451.1| methionine--tRNA ligase [Lactobacillus iners LactinV 01V1-a] Length = 547 Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 161/409 (39%), Positives = 246/409 (60%), Gaps = 18/409 (4%) Query: 116 KGDIYKGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRL 169 +GDIY G Y GWYS+ DE Y+ + EVYK G+ + + V+ ++E YFFR+ Sbjct: 4 QGDIYLGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRM 63 Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228 S Y D+LL YY+ +P+FILP R E+I+ F+K GL+DLS++R T DWGI +P DP++++ Sbjct: 64 SKYADRLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVV 123 Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK 288 YVWIDAL+NY++ GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK Sbjct: 124 YVWIDALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPK 183 Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348 ++F HG++L K K+SKS GN + P ++ G+DALRY+L+R I G DG + + + Sbjct: 184 QIFGHGWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVE 243 Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQN 407 RVN DLAN +GNL++R++SMI + DG++ P E + + + + + E M Sbjct: 244 RVNFDLANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQMDA 303 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFV 466 +AL + L+S ++Y D PW L K D V+ E +R +A+L++ + Sbjct: 304 LHFSKALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIM 363 Query: 467 PKLANKIFDILFVA--DENR---CFQSLDQRLKPGFMLHKTFDPIFPRF 510 + IF+ L ++ D N C+ + + + K PIFPR Sbjct: 364 TQSPVHIFEQLGLSLDDANAASLCWGAYGWK----NYVTKNPKPIFPRL 408 >gi|281207820|gb|EFA82000.1| methionyl-tRNA synthetase [Polysphondylium pallidum PN500] Length = 596 Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 180/531 (33%), Positives = 284/531 (53%), Gaps = 35/531 (6%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+T I Y N PHIGH Y ++ D +AR++R VL+ TGTDEHGQK+ AA+ A Sbjct: 69 ITTPIFYVNGTPHIGHLYTSVLGDAIARWNRFCNDKVLYMTGTDEHGQKVQDAAKKAQKD 128 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 V+ D+ S FR D ISYDD+IRTTE+RH + +W K+ G IYKG Y GWY Sbjct: 129 NIVYCDEISGVFRKSFDQFGISYDDYIRTTEQRHKNVVHDMWNKLDGNGLIYKGSYEGWY 188 Query: 129 SLRDEAYYNDDEVYKGAD-----------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 + DEA+ +D+V G + NP +W+ E Y F+L+ + + Sbjct: 189 CVSDEAFLTNDQVQDGMSPVTPQNPVSKPCKLSIESGNPCEWVSESNYMFKLTDFLKPID 248 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235 ++ +P + P + S++ LKDLS+SR + WGI++P+D +YVW+DAL Sbjct: 249 NWLSKNP--LYPESWNLQARSYLPH-LKDLSVSRPSSRLPWGIRVPNDESQSIYVWLDAL 305 Query: 236 TNYLTTTGYLD--NPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 TNYLT G + DG+ + D+ HVIGKDIL+FH+IYWPAFLL L LP + + Sbjct: 306 TNYLTVAGGFKARSADGTDIAWNHTDVTHVIGKDILKFHSIYWPAFLLGTGLKLPHSIVT 365 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 H + K+SKS GNVI P ++ E+ G++ +RYFL++ DG + ++ R+ A Sbjct: 366 HAHWTVERVKMSKSRGNVISPFDIAEKYGIEGVRYFLLKGGGLENDGDWSDLEVRSRITA 425 Query: 353 DLANGIGNLVSRSVSMIL---KDYDGMIPTPGAFTESDESILSVCSRVLQ---EIRENMQ 406 DLA+ GNLV+R + L + + + A T + + L + ++ Q + ++ + Sbjct: 426 DLADTFGNLVTRCTAKALHPSRAWPTCLSQTFAATAQEPNSLRIIEQMQQLVSLVNQHYK 485 Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWEL------KKTNPDRASTVLYVTVEVIRQLAI 460 I + +VI+ + + + KPW L + + R + ++Y+ +E IR +A+ Sbjct: 486 CGDIKSGIYEVINFTYATNNFVEQTKPWTLVPKPGKQAGDLMRLNDIMYILLECIRTIAL 545 Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511 LL +P+ + K D + V + +R ++ G+ +T P+ P L Sbjct: 546 LLSPVIPESSKKTLDHIGVDETHRNI----NHIQFGYDYPQTLVPMNPLIL 592 >gi|321250978|ref|XP_003191915.1| methionine-tRNA ligase [Cryptococcus gattii WM276] gi|317458383|gb|ADV20128.1| Methionine-tRNA ligase, putative [Cryptococcus gattii WM276] Length = 582 Score = 306 bits (784), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 187/496 (37%), Positives = 280/496 (56%), Gaps = 25/496 (5%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQN 64 Y++T I Y NA PHIGH + +++ DVLARF RL V+F TGTDEHG KI +AA+ Sbjct: 53 FYVTTPIFYVNASPHIGHLHSLLLTDVLARFSRLRCPQRKVVFATGTDEHGLKIQQAAKA 112 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV + F D S+ FR++A + + S DFIRTTE RH W + GDIYKG + Sbjct: 113 NGVGEQEFCDDVSQRFRNLAKLANASNTDFIRTTEPRHVKAVEQFWNTLVGSGDIYKGTH 172 Query: 125 SGWYSLRDEAYYNDDEVYK-GADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182 SGWYS+ DE++Y +V K DG+ + N V W EE + FRL +++ L + S Sbjct: 173 SGWYSISDESFYAASQVTKRPEDGKMIAIETGNEVIWEEETNWKFRLGKHKE-FLEKWLS 231 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLT 240 PE + P R +++ S L+DLS+SR + W I +P DP+ +YVW+DAL NY+T Sbjct: 232 QPESVHPNTVRLDLLRQTSS-LEDLSVSRPSSRVKWAIPVPGDPEQSIYVWVDALINYIT 290 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY D + WPAD+HV+GKDI++FHA++WP+ L SA+L PK++ +H Sbjct: 291 VLGYPDWQGKGERVGWPADVHVVGKDIIKFHALHWPSLLHSASLAAPKRIIAHAHWTMSH 350 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG--KDGFYDKDGLKKRVNADLANGI 358 K+SKS GNV+DPI + + G D +R++L+R I G D Y+ ++ + LA+ + Sbjct: 351 AKMSKSRGNVVDPIAAMTQWGEDGVRWYLMR-IGGGLVDDADYNPAEVEVQYRL-LADQM 408 Query: 359 GNLVSR-SVSMILK----DYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 GNL+SR S + +LK ++D G T + DE + + + + +E M+ + + Sbjct: 409 GNLLSRISGAKLLKKAKREFDWGDEKTGEKGKDRDEELDRMMAGMREEFEGKMEVFGVSQ 468 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT--VEVIRQLAILLQAFVPKLA 470 A V+ ++ ++ F + PW +P S+V +T +R AILLQ +P A Sbjct: 469 ACGGVMDVIMATNKLFTSLAPW-----SPSTPSSVPALTYAYHALRLSAILLQPIIPAKA 523 Query: 471 NKIFDILFVADENRCF 486 + D L V E R + Sbjct: 524 EEALDRLGVPAEERSW 539 >gi|269114911|ref|YP_003302674.1| methionyl-tRNA synthetase [Mycoplasma hominis] gi|268322536|emb|CAX37271.1| Methionyl-tRNA synthetase (Methionine-tRNAligase, MetRS) [Mycoplasma hominis ATCC 23114] Length = 521 Score = 305 bits (782), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 173/472 (36%), Positives = 269/472 (56%), Gaps = 14/472 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+ HIGH +A V + + G + LF TG DEHGQKI K A Sbjct: 5 KKTFYITTPIYYPSGNLHIGHLLTTTLASVYRNYKKQQGYETLFITGIDEHGQKIQKKAL 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 +T K +VD S+ F D+ +L I YD +IRTT+ H +T + ++ + KG IYK Sbjct: 65 EQNITPKEYVDIQSQKFVDLWKLLKIDYDKYIRTTDDYHIETIQKVFYLMEQKGYIYKSK 124 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNA-QHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G YS+ DE + + DG++Y+ + +Q ++EE YFF +S + + SY+E Sbjct: 125 YEGLYSISDEEFLTKTQAI-SKDGKFYHPISGHELQEVKEESYFFNMSKFTPWIKSYFEQ 183 Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNY 238 +P+FI E++ +F+ GL+DLS++R +FDWGIKI + Q+I+YVW+DAL NY Sbjct: 184 NPDFITNKATYKELMNNFINKGLEDLSITRVSFDWGIKIETKDAEKQHIIYVWLDALFNY 243 Query: 239 LTTTGYLDNPDGSK--AKFW---PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 L+ GY +N G + KFW +H++ K+I RFHAIYWP FL S +L LP K+ H Sbjct: 244 LSALGY-NNYLGQELYNKFWVNGNERVHLLAKEISRFHAIYWPIFLKSLDLNLPTKLVIH 302 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 +I+ K+SKS GNVI+PI +IE+ G + ++YF +I D + ++ L +NAD Sbjct: 303 SWIVTPEGKMSKSKGNVIEPIPLIEKYGAEPVKYFFASQINIDNDFSFSEELLINVLNAD 362 Query: 354 LANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN GNL +R+ M++ ++ +G P D+++ S + ++ N + Sbjct: 363 LANNFGNLANRTFKMVMLNFENGTTYCPNQLNSLDKNVYSEIENAYNDYKKYFDNFNADK 422 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 AL + I L ++ Y D +PW+LK+ P R + VL + I + ++L Sbjct: 423 ALKRAIELSKFLNEYIDKNEPWKLKENLP-RLNVVLNTLLNGIYAVNMMLSV 473 >gi|328718436|ref|XP_001949836.2| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like [Acyrthosiphon pisum] Length = 527 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 174/493 (35%), Positives = 276/493 (55%), Gaps = 20/493 (4%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKI 58 + ++ +I+T I Y NA PHIGH Y +IAD ARF +L L+++F+TGTDEHG K+ Sbjct: 11 VTKKTSYFITTPIFYVNASPHIGHLYSALIADASARFQKLLNPSLNIIFSTGTDEHGLKV 70 Query: 59 AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 KAA+N ++ K + + S +++ D DIS+ FIRTT + H + W K+ + Sbjct: 71 QKAAENCKISVKNYCTKISSSYQTTFDKFDISHTSFIRTTAENHKNCVHYFWSKL--QPH 128 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 I KG YSGWY DE + + D++ + + V+W EE+ Y F L ++ L Sbjct: 129 IRKGKYSGWYCTADETFLSQDQIELVNNVRVSKESGRQVEWAEEDNYKFDLRPFKHDLQC 188 Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALT 236 + S P+ I P + +E+++ + L D+SLSR WGI +P D +YVW+DAL Sbjct: 189 WL-SKPDRIKP-KVFHEILNREVNDLYDISLSRPKSRVSWGIPVPRDDTQTVYVWLDALV 246 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 NYLT +GY D +K WP ++ V GKDIL+FH I WP FL++A L LPK++F H Sbjct: 247 NYLTVSGYPD------SKIWPPNVQVCGKDILKFHGILWPIFLIAAGLELPKQIFVHSHW 300 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 EK+SK+ GNV+DPI + LRYFL+RE DG Y +K+ +NA+LA+ Sbjct: 301 KVNDEKMSKTKGNVVDPINAGCQYTESGLRYFLLREGTAHSDGNYSDLKIKRILNAELAD 360 Query: 357 GIGNLVSRSVSMILKDYDG-----MIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-I 410 +GNL++R + ++ +S LS VL +I + +L Sbjct: 361 TLGNLLNRCCGKAINPNLSYPKLDLLQIERLLADSYFIELSKKLEVLADIVGSHYEELNF 420 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 ++ + ++I+ + +R+F+ KPWEL K + ++ +L++T+E +R + LQ VP LA Sbjct: 421 YKGIDEIIATLQCCNRFFEYNKPWELAKQDVNKLKCILHITMETLRISGLALQPIVPVLA 480 Query: 471 NKIFDILFVADEN 483 +++ + L + + + Sbjct: 481 DQLLNKLNINNRD 493 >gi|146418705|ref|XP_001485318.1| hypothetical protein PGUG_03047 [Meyerozyma guilliermondii ATCC 6260] Length = 565 Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 179/520 (34%), Positives = 282/520 (54%), Gaps = 43/520 (8%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI++ I Y NA+PH+GH Y M + D +R+ +L + F TGTDEHG KI A+ G+ Sbjct: 17 YITSPIFYVNAKPHLGHLYSMHLCDTRSRWEKLKNKESFFVTGTDEHGLKIQAVAEKRGI 76 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + K VD+ S NF+ +A+ DI YD FIRTT+ H ++ + WK ++++G IYKG +SGW Sbjct: 77 SPKTLVDEVSLNFKHLAEKFDIQYDRFIRTTDGDHIESVKHFWKTMNERGLIYKGTHSGW 136 Query: 128 YSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y++ DE +Y + ++ K G N V + EE YFFRLS ++D+L++Y + Sbjct: 137 YAVSDETFYPESQIEKVTDSNGISKMISKETKNEVIFHEESNYFFRLSKFRDRLINYLKE 196 Query: 183 HPEFILPIERRNEVISFVKS-GLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239 +P+ I P + + +++ ++ L+DLS+SR + WGI++P D +YVW DAL NY+ Sbjct: 197 NPQLITPKNKYDSILAELEGEKLEDLSISRPSSRLLWGIEVPGDDTQRIYVWFDALINYI 256 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T GY + + + WPA +HVIGKDI RFH IYWP FL++A+LPLPK++ H L Sbjct: 257 TAAGYPKSLNAPTSP-WPA-VHVIGKDIARFHCIYWPIFLMAADLPLPKQIVIHSHWLCD 314 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKSLGNV+DP++ ++ G DA R+FL D Y + +L Sbjct: 315 GFKMSKSLGNVVDPLDTLDYYGQDACRFFLSEYSNIESDSNYSEREF-HFTRENLIGKYA 373 Query: 360 NLVSR----------SVSMILKDY---------DGMIPTPGAFTESDESILSVCSRVLQE 400 NLV+R SV+M+ + D P A ++ + + + Sbjct: 374 NLVTRCGGPSFDIEESVAMLKEGSFDKIESFWEDCPYENPAAVKDAAGKLRACLDNLYPA 433 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW----ELKKTN--PDRAST-------V 447 + +++N +A + ++ F +PW E+K N P++ T + Sbjct: 434 MDTHLENFDHMKATQVWWEAIEAGNQLFQLGQPWIFTKEMKNENLQPEKRETSKLVQSFL 493 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487 +Y+ E R +IL+ +P L++KI D L V+ + R Q Sbjct: 494 VYMAAETCRIGSILMGPIMPHLSHKILDRLGVSMQKRTAQ 533 >gi|190346781|gb|EDK38949.2| hypothetical protein PGUG_03047 [Meyerozyma guilliermondii ATCC 6260] Length = 565 Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 179/520 (34%), Positives = 281/520 (54%), Gaps = 43/520 (8%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI++ I Y NA+PH+GH Y M + D +R+ +L + F TGTDEHG KI A+ G+ Sbjct: 17 YITSPIFYVNAKPHLGHLYSMHLCDTRSRWEKLKNKESFFVTGTDEHGLKIQAVAEKRGI 76 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + K VD+ S NF+ +A+ DI YD FIRTT+ H ++ + WK ++++G IYKG +SGW Sbjct: 77 SPKTLVDEVSLNFKHLAEKFDIQYDRFIRTTDGDHIESVKHFWKTMNERGLIYKGTHSGW 136 Query: 128 YSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y++ DE +Y + ++ K G N V + EE YFFRLS ++D+L++Y + Sbjct: 137 YAVSDETFYPESQIEKVTDSNGISKMISKETKNEVIFHEESNYFFRLSKFRDRLINYLKE 196 Query: 183 HPEFILPIERRNEVISFVKS-GLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239 +P+ I P + + +++ ++ L+DLS+SR + WGI++P D +YVW DAL NY+ Sbjct: 197 NPQLITPKNKYDSILAELEGEKLEDLSISRPSSRLSWGIEVPGDDTQRIYVWFDALINYI 256 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T GY + + + WPA +HVIGKDI RFH IYWP FL++A+LPLPK++ H L Sbjct: 257 TAAGYPKSLNAPTSP-WPA-VHVIGKDIARFHCIYWPIFLMAADLPLPKQIVIHSHWLCD 314 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKSLGNV+DP++ ++ G DA R+FL D Y + +L Sbjct: 315 GFKMSKSLGNVVDPLDTLDYYGQDACRFFLSEYSNIESDSNYSEREF-HFTRENLIGKYA 373 Query: 360 NLVSR----------SVSMILKDY---------DGMIPTPGAFTESDESILSVCSRVLQE 400 NLV+R SV+M + D P A ++ + + + Sbjct: 374 NLVTRCGGPSFDIEESVAMSKEGSFDKIESFWEDCPYENPAAVKDAAGKLRACLDNLYPA 433 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW----ELKKTN--PDRAST-------V 447 + +++N +A + ++ F +PW E+K N P++ T + Sbjct: 434 MDTHLENFDHMKATQVWWEAIEAGNQLFQLGQPWIFTKEMKNENLQPEKRETSKLVQSFL 493 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487 +Y+ E R +IL+ +P L++KI D L V+ + R Q Sbjct: 494 VYMAAETCRIGSILMGPIMPHLSHKILDRLGVSMQKRTAQ 533 >gi|194476532|ref|YP_002048711.1| methionine--tRNA ligase [Paulinella chromatophora] gi|171191539|gb|ACB42501.1| methionine--tRNA ligase [Paulinella chromatophora] Length = 524 Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 169/454 (37%), Positives = 250/454 (55%), Gaps = 10/454 (2%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y N +PH+G AY + D LAR+ RL G V+F TG DEHGQKI + A+ A + Sbjct: 5 VTTPLYYVNDRPHLGSAYTTLACDALARYQRLIGKSVVFITGCDEHGQKIQRTAEAASLK 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + +Q S + + IS D FIRTT+ RH + + ++ GDI +G GWY Sbjct: 65 PQESCNQVSEEYHHLWSRWQISNDRFIRTTDLRHQAIVKEFFLRVEKAGDILEGQQQGWY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 + E + D+ V D Q Q ++W +E FF LS YQ ++ + P FIL Sbjct: 125 CVACEEF-KDEPVDAEGDNQCAIHQRR-LEWRDEPNLFFNLSRYQKQIEELIQK-PGFIL 181 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248 P+ RR E+ + V GL + S+SR WGI +P + YVW DAL YLT +P Sbjct: 182 PVSRRREIENLVAQGLHNFSISRINLPWGIPVPGHTDHTFYVWFDALIGYLTALLEPSDP 241 Query: 249 ---DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 D + WPA++HVIGKDILRFHA+YWPA L+SA L +P VF HGF+ +G+K+ K Sbjct: 242 PELDIILRRGWPANVHVIGKDILRFHAVYWPAMLMSAGLEVPDMVFGHGFLTREGKKMGK 301 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SLGN++DP ++EE G D++R++L+R+I G+DG + K +N DL+N IGNL++R+ Sbjct: 302 SLGNILDPELLLEEYGRDSVRWYLLRDIPFGEDGDFQKKRFIDLINNDLSNTIGNLLNRT 361 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424 +SM + + +P +D+ L+ S+ I ++L RA + L ++ Sbjct: 362 LSMARRWFANAVPDCREAV-TDQHSLAKASQSAILINITALDKLEFRRAAEATLDLAAQA 420 Query: 425 DRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIR 456 + + Q PW K R LY +E R Sbjct: 421 NTFLSEQAPWSRIKQEGGREQVGADLYAVLETTR 454 >gi|193216594|ref|YP_001999836.1| methionyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1] gi|193001917|gb|ACF07132.1| methionyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1] Length = 517 Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 166/476 (34%), Positives = 272/476 (57%), Gaps = 11/476 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M+ ++ YIST I YP+ + HIGH +A V F R +G D F TG DEHGQKIA+ Sbjct: 1 METKKTFYISTPIYYPSGKLHIGHLLTTTLAWVYRNFKRNEGYDTFFVTGIDEHGQKIAQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ A ++ + + D+ ++ F ++ D L I YD F RTT +H + ++ + KG IY Sbjct: 61 KAKLANLSDQAYADEQAKIFLELWDDLKIDYDFFSRTTSPKHEVIVKKVFDALLKKGFIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 KG Y G YS+ DE + + + +G+YY+ + + + EE YFF++S++ + Y Sbjct: 121 KGKYEGLYSVEDEEFLTKSQAFL-INGEYYHPTSKHKLNVVSEESYFFKMSSFGPWIKDY 179 Query: 180 YESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDAL 235 +E++P+F+ NE++ +F+ GL+DLS++R +FDWGIK+ D +++YVW+DAL Sbjct: 180 FENNPDFVSSKATINEMLNNFINPGLEDLSVTRVSFDWGIKLDQYQDKKTHVIYVWLDAL 239 Query: 236 TNYLTTTGYLDNPDGSKAKFW---PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 NYLT + + D + KFW +H++GK+I RFH IYWP FL + +L LP K Sbjct: 240 FNYLTALNFWEEDDENYQKFWVNGTERVHILGKEISRFHCIYWPIFLQALDLKLPTKEIV 299 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 H +I+ K+SKS GNVIDP+ ++++ G++ ++YF ++ D + + L +NA Sbjct: 300 HSWIVTPEGKMSKSKGNVIDPLPLVKKYGIEEVKYFFSSQVNIDSDFAFSESLLINVLNA 359 Query: 353 DLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 DLAN GNLV+R++ M+ + + +G D+ + ++ Q E+ N Sbjct: 360 DLANNFGNLVNRTIKMVNQSFKEGTTYQEKDLLALDKELYLKIEQLYQSYCEHFNNFYAD 419 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 +AL + + L S ++ Y D +PW+LK N +R + VL + I + +L P Sbjct: 420 KALKKAVELSSFLNEYIDRNEPWKLKD-NLERLNVVLNTLLNGIYVVNYMLSVAFP 474 >gi|268570204|ref|XP_002640717.1| Hypothetical protein CBG19784 [Caenorhabditis briggsae] Length = 474 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 182/486 (37%), Positives = 280/486 (57%), Gaps = 23/486 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-----VLFTTGTDEHGQKIAKAA 62 Y+++ I Y NA+PHIGHAY ++ D R+++L LF+ GTDEHG + Sbjct: 1 YVTSPIFYANAEPHIGHAYTAVLCDTAHRWNQLKNFKDKESKALFSIGTDEHG-----TS 55 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 Q AG T K F DQ S F + D L+IS+ +FIRTT+ +H ++ + W+ + D+G IYK Sbjct: 56 QLAGTTPKQFCDQVSSKFSTLFDTLNISHTNFIRTTDPKHAESVQHFWRVLQDRGHIYKS 115 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQY-YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 YSG+YS+ +E + ++EV + A+ + V+W+EEE Y FRLS +++K+ + E Sbjct: 116 SYSGYYSISEECFIPENEVEENAENKMVLKTTGTAVEWIEEENYMFRLSEFREKVGEWIE 175 Query: 182 SHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 + + P++ ++ + S G +S +RK WGI +PDDP +YVW+DAL NYLT Sbjct: 176 K-TDVVWPVKYKSLALDSLTLDGDLSISRARKRLSWGISVPDDPSQTIYVWLDALVNYLT 234 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 +GY + WP VIGKDI +FH YWPAFL++A+LPLP++VF HG L Sbjct: 235 VSGYPKD-----RLVWPPTCQVIGKDITKFHLYYWPAFLMAADLPLPQRVFVHGHWLVDN 289 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKSLGNV++P I++ + LRYFL+++ D + + + VN+DL N +GN Sbjct: 290 VKMSKSLGNVVNPKHAIDKFTSEGLRYFLLKQGNPSNDCSFSWNSCLETVNSDLVNNVGN 349 Query: 361 LVSRS-VSMILKD--YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 L++RS V I K Y + E E +L + ++ E + ++ + Q+ Sbjct: 350 LLNRSTVEKINKSGTYPRRVELEKKVKEDTEKLLEMLEESREKCEELYDDMYYYKGIEQL 409 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + E +R F +PW K+T+ +R ++L+VT E IR ++ILLQ PK+AN D L Sbjct: 410 MLTMKEANRVFQLSQPW--KETDSERLESLLFVTYETIRIVSILLQPITPKMANFCLDRL 467 Query: 478 FVADEN 483 V N Sbjct: 468 GVDQRN 473 >gi|31544361|ref|NP_852939.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)] gi|31541205|gb|AAP56507.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)] gi|284930403|gb|ADC30342.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)] Length = 590 Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 172/511 (33%), Positives = 275/511 (53%), Gaps = 21/511 (4%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + +K YIST I Y + PHIGHAY I+ D LARF + G DV F +GTDE G+KI Sbjct: 11 MLKNKKCYISTPIYYASGNPHIGHAYTTILGDFLARFKKQRGYDVFFLSGTDEFGKKIET 70 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A++ +T + VDQ S F+++ D+L+I F+RTTE +H + + ++ K IY Sbjct: 71 KAKSLNLTPQKMVDQYSSKFKELFDLLNIELTRFVRTTEPKHQEVVKKIFGLFYLKKYIY 130 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGA--------------DGQYYNAQHNPVQWMEEEGYF 166 + G Y + E Y V K A D Q Y + + + E YF Sbjct: 131 LDQWQGLYCVDCEENYTTSSVLKKADLVEKTNLDLSMDPDDQLYCHVGHKISSINEPSYF 190 Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQ 225 +LS + D + + + P R E++ +FV GLKDLS+SR + WGI+ P + Sbjct: 191 IKLSEFSDFIKESLTDNVPSVFPTSRNKEMLNNFVNVGLKDLSISRTSISWGIETPLNKS 250 Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLS 281 + +YVW+DAL +YLT+ G+ D +FW D +H+I K+I RFH IYW FL Sbjct: 251 HRIYVWLDALFSYLTSMGFGSEDDKLYQEFWNNDSSERIHLIAKEITRFHRIYWVIFLKM 310 Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + P ++ SHG+IL G K+SKSL N+IDPIE+ E GVD LRY+L++E++ +DG Sbjct: 311 LGIKQPTRMISHGWILDENGNKMSKSLNNIIDPIELAELFGVDQLRYYLLKELSLSEDGK 370 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 K +++ +N+DL N +GNLV R + M+ + I A E ++ L+ ++ E Sbjct: 371 VGKRLIQETINSDLINNLGNLVHRLIPMLESRQESTILPYLAGNEVEDKYLADLQKLPAE 430 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLA 459 + ++ I A+ V+++ E + +KPWEL K N + + +L+ IR + Sbjct: 431 FEKLVEENDIRSAIKLVLNISKEYSSVIEVRKPWELYKNNKTQELANILFAGACAIRTVF 490 Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLD 490 +LL+ + + ++++ + E ++++ Sbjct: 491 VLLEPILTTKSKEVYEQMNFTPEQTQLKNIN 521 >gi|50311457|ref|XP_455753.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644889|emb|CAG98461.1| KLLA0F14971p [Kluyveromyces lactis] Length = 568 Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 181/529 (34%), Positives = 284/529 (53%), Gaps = 53/529 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K +I+T I YPNA+PH+GH Y ++ DV R+ +L G D FTTG DEHG KI AAQ Sbjct: 11 KFHITTPIFYPNAKPHLGHLYSSLLCDVQNRWKKLAGQDTCFTTGVDEHGLKIQLAAQQK 70 Query: 66 GVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G + K FVD+ +F + +I + FIRTT+ H + + LW + G IYKG + Sbjct: 71 GYSNPKAFVDELCEHFVHLDKDANIKFTRFIRTTDPDHVNNVKKLWNLCYNNGYIYKGEH 130 Query: 125 SGWYSLRDEAYYNDDEV-----------YKGA---DGQYYNAQ-HNPVQWMEEEGYFFRL 169 GWYS+ DE +Y D ++ Y G+ D +Y N++ N V + E YFF+L Sbjct: 131 KGWYSVSDETFYPDTKILKLTIDGPPIPYDGSFDPDAKYINSESRNEVTYQSELNYFFKL 190 Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQY 226 SA+Q+ L+ +P FI P R ++++ ++S L+D+S+SR WGI +P+D Sbjct: 191 SAFQEPLIKLLRENPTFIYPPLRHSQILRELESNELRDISVSRPATRLQWGIPVPEDESQ 250 Query: 227 IMYVWIDALTNYLTTTGYLD----NPDGSKA------------KFWPADLHVIGKDILRF 270 +YVW DAL NYLT+ G +D + D ++ ++W HVIGKDI++F Sbjct: 251 KVYVWFDALCNYLTSIGGIDAIRNDVDSTQVLHNNRSFIEKPKEWWENTEHVIGKDIIKF 310 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H +YWPAFLL+A LPLP +V HG L G K+SKSLGNV+DPI++I G D R++L+ Sbjct: 311 HTVYWPAFLLAAKLPLPNRVVVHGHWLSGGVKMSKSLGNVVDPIQIISYYGADTTRWYLL 370 Query: 331 REIACGKDG-FYDKDGLKKRVNADLANGIGNLVSR------SVSMILKDYDG--MIPTPG 381 DG F +K+ + R L + +GNL++R S++ ++ + G + Sbjct: 371 ENSNIESDGNFIEKNLWETR--ELLCSKLGNLINRCGGKKFSLASGVELFSGKPIEELSS 428 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFDAQKPWELK 437 F + ++ + + L E++ N I A + ++++E + + + +PW K Sbjct: 429 VFPKESQAEFTALLKSLDNCTESVNNCFQQYDITGAQKILWNIINEANSFIQSTEPWSKK 488 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 D ++Y +E R I Q +P +A ++ + L V+ + R Sbjct: 489 GLEKD---LIVYSAMEAARISLIFSQPIIPNIAERLLNRLDVSSDRRTL 534 >gi|296242227|ref|YP_003649714.1| methionyl-tRNA synthetase [Thermosphaera aggregans DSM 11486] gi|296094811|gb|ADG90762.1| methionyl-tRNA synthetase [Thermosphaera aggregans DSM 11486] Length = 503 Score = 300 bits (767), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 188/482 (39%), Positives = 269/482 (55%), Gaps = 17/482 (3%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 YI+T I YPN PHIGHAY + ADVLARF RL DV F TG DEHG KI + A+ G Sbjct: 4 FYITTPIYYPNGPPHIGHAYTTVYADVLARFARLIEKDVFFLTGNDEHGLKIQRFAEKLG 63 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T K VD+ + +RD L+ISYD FIRTT+ H ++K+ KG +YK Y G Sbjct: 64 KTPKEVVDEMAVIYRDYWLRLNISYDYFIRTTDSVHEKVVMSSFEKLYRKGYVYKDKYGG 123 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 Y + E YY E Y +G+ Y HN P++++EEE Y+F+LS ++D LL ++ + Sbjct: 124 LYCVDCEKYYLPGE-YVEVEGKPYCPIHNKPLEYLEEETYYFKLSEFKDYLLEVLRNN-K 181 Query: 186 FILPIERRNEVISFV-KSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 + P E EVIS + K GL+DLS++R + WG+K+P DP Y++YVW DAL NY+T Sbjct: 182 IVYPEEYSLEVISRIEKEGLRDLSIARPVERVSWGVKVPFDPNYVIYVWFDALLNYITGA 241 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY + + + K+W HV+GKDIL FH W + L ++P PKKV H F+++KG K Sbjct: 242 GYATDLERFE-KYWANVHHVVGKDILWFHTAIWFSILKGLDIPPPKKVIVHAFLINKGLK 300 Query: 303 ISKSLGNVIDPIEVIEEV-GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 I KS GNVI +++ G D +RY L R KD + + N +LA+ GNL Sbjct: 301 IGKSAGNVISIDDLLARYNGPDGVRYILSRVFNMSKDSEVSFELMDAIYNDELADTYGNL 360 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 + R ++ +K G I + E I+ L E M+N + A+ +++ L+ Sbjct: 361 IRRVGALAIKKLRGKIYRREVDKKLSEQIMVKMGNYL----ERMKNYDVPGAIIEIMDLL 416 Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 E + Y + +PWE K +P + LY +E+IR I L +P +A+K+ D Sbjct: 417 REGNAYVNNTRPWE--KEDPSKE---LYGLLELIRVSTIALAPVIPSVASKVADEFGFKI 471 Query: 482 EN 483 EN Sbjct: 472 EN 473 >gi|284931170|gb|ADC31108.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. F] Length = 597 Score = 299 bits (766), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 172/511 (33%), Positives = 275/511 (53%), Gaps = 21/511 (4%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + +K YIST I Y + PHIGHAY I+ D LARF + G DV F +GTDE G+KI Sbjct: 11 MLKNKKCYISTPIYYASGNPHIGHAYTTILGDFLARFKKQRGYDVFFLSGTDEFGKKIET 70 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A++ +T + VDQ S F+++ D+L+I F+RTTE +H + + ++ K IY Sbjct: 71 KAKSLNLTPQKMVDQYSSKFKELFDLLNIELTRFVRTTEPKHQEVVKKIFGLFYLKKYIY 130 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGA--------------DGQYYNAQHNPVQWMEEEGYF 166 + G Y + E Y V K A D Q Y + + + E YF Sbjct: 131 LDQWQGLYCVDCEENYTTSSVLKKADLVEKTNLDLSMDPDDQLYCHVGHKISSINEPSYF 190 Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQ 225 +LS + + + + + P R E++ +FV GLKDLS+SR + WGI+ P + Sbjct: 191 IKLSEFSNFIKESLTDNVPSVFPTSRNKEMLNNFVNVGLKDLSISRTSISWGIETPLNKS 250 Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLS 281 + +YVW+DAL +YLT+ G+ D +FW D +H+I K+I RFH IYW FL Sbjct: 251 HRIYVWLDALFSYLTSMGFGSEDDKLYQEFWNNDSSERIHLIAKEITRFHRIYWVIFLKM 310 Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + P ++ SHG+IL G K+SKSL N+IDPIE+ E GVD LRY+L++E++ +DG Sbjct: 311 LGIKQPTRMISHGWILDENGNKMSKSLNNIIDPIELAELFGVDQLRYYLLKELSLSEDGK 370 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 K +++ +N+DL N +GNLV R + M+ + I A E ++ L+ ++ E Sbjct: 371 VGKRLIQETINSDLINNLGNLVHRLIPMLESRQESTILPYLAGNEVEDKYLADLQKLPAE 430 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLA 459 + ++ I A+ V+++ E + +KPWEL K N + + VL+ IR + Sbjct: 431 FEKLVEENDIRSAIKLVLNISKEYSSVIEVRKPWELYKNNKTQELANVLFAGACAIRTVF 490 Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLD 490 +LL+ + + ++++ + E ++++ Sbjct: 491 VLLEPILTTKSKEVYEQMNFTPEQTQLKNIN 521 >gi|326472661|gb|EGD96670.1| methionine-tRNA synthetase [Trichophyton tonsurans CBS 112818] Length = 559 Score = 299 bits (765), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 172/501 (34%), Positives = 260/501 (51%), Gaps = 63/501 (12%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I Y NA PHIGH Y ++IAD+L R+ R Sbjct: 56 YVTTPIFYVNAAPHIGHLYTILIADILKRWQR---------------------------- 87 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 F N F+ +A + SYD FIRTT+ H + W+ ++ +G IY+G + GW Sbjct: 88 ----FAIGNCETFKLLAREANASYDHFIRTTDSAHKAAVQFFWENLNHRGYIYEGKHEGW 143 Query: 128 YSLRDEAYYNDDEVYKGAD---GQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 YS+ DE +Y V+ D G+ A V++ +E Y F+LSA+QD+LL +Y Sbjct: 144 YSVSDETFYPASAVHSTLDPATGRKMMASIETGKEVKFSQETNYHFKLSAFQDRLLEHYR 203 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239 +P+FI P + ++ V SGL+DLS+SR WGI +P D +YVW+DAL NY+ Sbjct: 204 KNPKFIQPKVYMDSIVQNVASGLQDLSISRPVDRLSWGIPVPGDTTQTIYVWLDALVNYI 263 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T GY P + WPAD+HV+GKDI RFH IYWPAFL++ +LPLP+ + +H Sbjct: 264 TYAGYPFTPGREQESIWPADIHVVGKDITRFHCIYWPAFLMALDLPLPRTILTHAHWTMN 323 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GNV++P+ + GVD +R++L D YD + + L G+G Sbjct: 324 HSKMSKSTGNVVNPMFAMARYGVDPMRFYLAMNGGLASDTDYDNSYIVRDYKNILQGGLG 383 Query: 360 NLVSRSV--------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-- 409 NL SR + ++K +G G+ D S + L+++ + NQ+ Sbjct: 384 NLCSRVMRGKGWNVRESVVKMANGQ----GSRRAKDPSEIEHM-EFLEKVPGLVSNQMDE 438 Query: 410 --IHRALAQVISLVSEVDRYFDAQKPWELKK---TNP---DRASTVLYVTVEVIRQLAIL 461 RAL +++ ++ + +RY + PW L K T+P D+ V+Y E +R IL Sbjct: 439 LNPRRALEEIVKIIDQTNRYVQSTGPWNLAKEASTDPTAHDQLVGVIYNATESLRIAGIL 498 Query: 462 LQAFVPKLANKIFDILFVADE 482 LQ F+P+ A K+ D+L V ++ Sbjct: 499 LQPFMPEKAKKLLDMLGVEED 519 >gi|293364032|ref|ZP_06610768.1| methionine--tRNA ligase [Mycoplasma alligatoris A21JP2] gi|292552522|gb|EFF41296.1| methionine--tRNA ligase [Mycoplasma alligatoris A21JP2] Length = 515 Score = 299 bits (765), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 169/505 (33%), Positives = 278/505 (55%), Gaps = 19/505 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K ++ YI+T I Y + HIGH Y +A +A + + G DV F TG+DEHGQKI Sbjct: 3 KNKKTFYITTPIYYASGNLHIGHLYTTTLAWTIANYKKSRGYDVKFLTGSDEHGQKIFLK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 AQ A ++ + +VD +N++ M I YD F RTT + H +T + +++ KG IY Sbjct: 63 AQEANISAQKYVDDLVKNYKKMWSDFGIDYDYFSRTTNQNHKETIQQIFELFLKKGIIYN 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180 G Y G YS+ DE ++ + KG DG YY+ N + ++EE YFF++S +Q+ L Sbjct: 123 GNYEGLYSVSDEEFFTKTQAVKGQDGNYYHPLSNHKLSVVKEESYFFKMSEFQEWLKLEI 182 Query: 181 ESHPEFILPIERRNEV-ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 ++P ++ P + NE+ +F+ GL+DLS++R WGIK DP++ +YVW+DAL NY+ Sbjct: 183 LNNPTWLNPQKVINELNNNFISKGLEDLSVTRSNVSWGIKTLSDPKHTIYVWLDALCNYI 242 Query: 240 TTTGY--LDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 + G+ N + K+W +H++GK+I RFH IYWP FL + ++ +P K+ SHG Sbjct: 243 SALGFNLKSNTNTDFEKYWQNGDEIVHLLGKEISRFHFIYWPIFLKALDIKMPSKMISHG 302 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +I+ K+SKS NVIDP +++ + + ++YF V +I G+DG +D + +N++L Sbjct: 303 WIITPTGKMSKSKNNVIDPYDLLAKYHPEMIKYFFVSKINLGEDGVFDIKLFEDTINSEL 362 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----I 410 N GNLVSR++ MI +D I +SD++I + E +E + Sbjct: 363 INNYGNLVSRTLKMISNSFDNGIKHK----KSDDNIHKNIDTAILESKEKFIKYFDEFNL 418 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 L I L + +++Y D PW+L D +L + I ++ L+ +P+ Sbjct: 419 STGLKVAIDLGNTLNKYIDETTPWKLTD-RLDELELILSRLLNGIYAMSTYLKVVMPQKM 477 Query: 471 NKI---FDILFVADENRCFQSLDQR 492 N++ +I F ++ + F+ D + Sbjct: 478 NEVSKALNIEFDLEQVQNFEKFDNK 502 >gi|255070991|ref|XP_002507577.1| predicted protein [Micromonas sp. RCC299] gi|226522852|gb|ACO68835.1| predicted protein [Micromonas sp. RCC299] Length = 509 Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 184/514 (35%), Positives = 290/514 (56%), Gaps = 34/514 (6%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y N +PHIGH Y +ADV AR R G DV F TGTDEHG K+ ++A+ G+ Sbjct: 1 VTTPVYYVNDKPHIGHVYTSTVADVYARLQRNMGKDVFFLTGTDEHGLKVEQSAEKRGIG 60 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 T+ D+NS FR++ D ++ISY FIRTT+ H + L + + KG IY G + GWY Sbjct: 61 TQQLADENSALFREVMDDMNISYTSFIRTTDTSHQVQVQRLVEILLQKGFIYLGKFEGWY 120 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 E YY E+ G + EE Y+F+LSA+Q++LL ++E +P F+ Sbjct: 121 DEGQEEYYTAKEI-----GYKSLISGKDLTRSSEENYYFKLSAFQEQLLRFHEDNPYFLT 175 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT----TTGY 244 P RRNE+I+ ++ GL D+ +SR F WGI +P D +++YVWIDAL NY+T G Sbjct: 176 PPARRNEIINRLQEGLNDIPVSRTNFTWGITMPGDDSHVIYVWIDALLNYITALNLAEGL 235 Query: 245 LDNPDGSKAK-------FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 + D S FWPA LHV+ K+I FHA+ WPA LL+ LPLP++V +HGF + Sbjct: 236 GKDADESICHSEEGLKDFWPASLHVMAKEISWFHAVIWPALLLALELPLPERVHAHGFWI 295 Query: 298 HKGEKISKSLGNVIDPIEVIEEV----GVDALRYFLVREIACG-KDGFYDKDGLKKRVNA 352 +G+K+SKSLGN +D +EV++ G+D LRY+L+ E G +D + + + + Sbjct: 296 REGKKMSKSLGNFVD-LEVMKRFSDHYGLDGLRYYLLTEGPVGSQDANFSAGRVHEVYST 354 Query: 353 DLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESIL-------SVCSRVLQEIREN 404 DLAN +GN +SR+ +MI K Y +G +P+ + + I ++ + ++ + Sbjct: 355 DLANTLGNSLSRTTAMINKYYSEGGLPSE--ISSAGNRITWERFDWPTLTAEAAADVVRH 412 Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILL 462 ++ + +A I LV+ VD + +P+ + K + + VLY +E +R +LL Sbjct: 413 VEALELPKATNAAIGLVARVDLFISETEPFRMAKDESKAEELGAVLYQCLEALRIACVLL 472 Query: 463 QAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496 + F+P+ +++ + + + N + LKPG Sbjct: 473 EPFLPQKIDEVGKHMDLGNGNFKERVRWGSLKPG 506 >gi|198431365|ref|XP_002126600.1| PREDICTED: similar to putative methionyl tRNA synthetase [Ciona intestinalis] Length = 567 Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 172/511 (33%), Positives = 273/511 (53%), Gaps = 30/511 (5%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL-DGLDVLFTTGTDEHGQKIAK 60 K + Y +T I Y N+ PHIGH Y +AD R+ +L + TGTDE+G K+ K Sbjct: 26 KRCKTYYATTPIYYVNSVPHIGHLYTTTLADTACRWKQLVTDTECRLATGTDEYGSKVMK 85 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA + T + ++ S F++M D +SY DFIRTTE+RH +T + W+ + G IY Sbjct: 86 AAAINDMETIEYCNKISSRFKEMCDEFGLSYHDFIRTTEERHKETVQHFWEVVQSNGYIY 145 Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADG--QYYNAQH-NPVQWMEEEGYFFRLSAYQD 174 KG Y GWY DE + +EV+ + G +Y + + + V+W +E Y F+LS + D Sbjct: 146 KGIYEGWYCTSDETFLTQSQVEEVHNKSTGKSEYVSIESGHAVEWTKETNYMFQLSFFTD 205 Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWI 232 + S P+F+ P + RN V+ + + DLS+SR+ WGI +P D +YVW+ Sbjct: 206 IIREKILSDPDFVYPSKARNAVLKLLDEQIGDLSISRERSRVPWGIPVPRDSSQTIYVWM 265 Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 DAL NYLT +GY P S + WPAD+H IG DIL+FHAI+WPAFL++A + LPK++ + Sbjct: 266 DALVNYLTVSGY---PRSSYTEMWPADVHFIGVDILKFHAIFWPAFLMAAGIELPKQIVA 322 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 K+SKS GNV+DP ++ +V + +YFL+R+ D Y + + + +NA Sbjct: 323 SSHWTIDYSKMSKSKGNVVDPFDIAGKVTAEGFKYFLLRQGVLEHDCNYTESLVYEVINA 382 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV-------LQEIR--- 402 DL N +GN ++R+ + L + P DE + R+ +Q+++ Sbjct: 383 DLVNVLGNCLNRAGAKKLNPQNHYPPFHKEIFSKDELGNYIEKRITDLDMNYIQQVKNLP 442 Query: 403 ----ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVI 455 + + A+ ++IS+ E + + W+L + +PD ++++ E + Sbjct: 443 AVADSHCSKFHFYNAIHEIISIAREANMMVHRHQAWKLDE-HPDDLKLLESIVHSVFEGL 501 Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCF 486 R ILLQ +P LA K+ D L + R + Sbjct: 502 RVAGILLQPMIPTLATKLLDKLNIPLNERTW 532 >gi|313678697|ref|YP_004056437.1| methionine--tRNA ligase [Mycoplasma bovis PG45] gi|312950304|gb|ADR24899.1| methionine--tRNA ligase [Mycoplasma bovis PG45] Length = 516 Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 175/484 (36%), Positives = 281/484 (58%), Gaps = 16/484 (3%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + YI+T I Y + HIGH Y +A ++A + R+ G DV F TG+DEHGQKI + A Sbjct: 2 KNKTFYITTPIYYTSGPLHIGHLYCTTVAWIIANYKRVLGYDVKFLTGSDEHGQKIEQKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG +V+V++ +++ M +I+YD F RTT+ +H + ++ K G IYKG Sbjct: 62 ALAGKEPQVYVNELVDSYKKMWQQYNINYDYFSRTTDPKHMKMVQTIFTKFLQLGLIYKG 121 Query: 123 CYSGWYSLRDEAYYNDDE-VYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 Y G YS+ DE + ++ V+K +G+YY+ + + M EE YFF++ +Q+ L+ Sbjct: 122 KYDGLYSVNDEEFLTKNQAVFK--NGEYYHPTSGHKLVLMSEESYFFKMKEFQNWWLNEV 179 Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 ++PE++LP + NE+IS FV GL+DLS++R +WGIK +DP++ +YVW+DAL NY+ Sbjct: 180 NNNPEWLLPSKMTNEMISNFVSEGLEDLSVTRVNINWGIKTNEDPKHTLYVWLDALFNYV 239 Query: 240 TTTGY-LDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 + G+ LDNP K+W +H+IGK+I RFH IYW F + + +P K+++HG Sbjct: 240 SALGFDLDNPGDDYLKYWENGDEIVHIIGKEISRFHFIYWTIFTKALGIKVPNKIYAHGL 299 Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + K G K+SKSL NVI+P + + + ++Y+ I G+DG + ++ L VNADL Sbjct: 300 LRDKDGRKMSKSLNNVIEPEYLFSKYHDEMIKYYFASAITFGEDGNFSEEKLIDIVNADL 359 Query: 355 ANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 N GNLVSR++ MI + +G+ + +E E + S V + I E M N + +A Sbjct: 360 VNNYGNLVSRTLKMISNSFPEGLFYRQSSQSEHLEIEGKINSFVPKFI-ELMDNFKLDKA 418 Query: 414 LAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 L ++L +++Y D +PW L + N +L + I ++ LQ +P NK Sbjct: 419 LEHTMNLSDSLNKYIDTLRPWTLTSEENKAELENILIRLLNGIYAVSWSLQIVMP---NK 475 Query: 473 IFDI 476 I ++ Sbjct: 476 ITEV 479 >gi|15828961|ref|NP_326321.1| methionyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP] gi|14424467|sp|Q50319|SYM_MYCPU RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|14089904|emb|CAC13663.1| METHIONYL-TRNA SYNTHETASE (METHIONINE--TRNA LIGASE) (METRS) [Mycoplasma pulmonis] Length = 509 Score = 296 bits (758), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 165/474 (34%), Positives = 260/474 (54%), Gaps = 7/474 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ +YI+T I YP+ H+GH Y IA VL + ++ G + F+TG+DEHGQKI AQ Sbjct: 2 KKTIYITTPIYYPSGDLHLGHIYSTNIAWVLRNYKKIQGYETFFSTGSDEHGQKIFNKAQ 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 + T+ +VD+ + F D +I YD F RTT K H + R ++ K+ +K IY Sbjct: 62 ELKLETQDYVDRQANKFIDFWKKANIDYDFFARTTNKEHKEVVREIFHKLKEKNIIYLDK 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G YS+ DE + + + K + ++ ++ + +EEE YFF L+ + D + + + Sbjct: 122 YVGLYSVSDEEFLTETQALKKDNKFFHPVSNHELIKIEEESYFFNLNLFIDWIKEFLDQ- 180 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 + I NE+ S F+ GL++LS++R DWGIKI ++++YVW+DAL YLT Sbjct: 181 -DIISSKAIVNELKSNFINKGLENLSVTRIKLDWGIKIDQSSKHVIYVWLDALFQYLTNL 239 Query: 243 GYLDNPDGSKAKFWP---ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GY KFW +HV+GK+I RFH IYWP FL S N+ +P K+ SHG+I+ Sbjct: 240 GYGSKNQSLYEKFWKNGDERVHVVGKEITRFHCIYWPIFLKSLNVKMPTKIISHGWIVTP 299 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K+SKS GNV+DP+ +IE+ G + L+YFL+ +++ KDG + ++ L N DL N Sbjct: 300 EGKMSKSKGNVVDPVVLIEKYGSEVLKYFLIAKLSIKKDGVFSEELLVSAYNNDLVNTFS 359 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NL+SR+V MIL +YD + + + D I + + +A I+ Sbjct: 360 NLISRTVKMILNNYDRPLSFILSKDQEDLEIEKDIKNSFETFCSFAEEYEFDKAFESTIN 419 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 L +++ Y D +PW L K + + VL + I +A L +P+ + K+ Sbjct: 420 LGKKLNLYIDKTRPWLLTKED-QKLEIVLNRLLNGIYAMAFELSIVMPQTSQKL 472 >gi|294155450|ref|YP_003559834.1| methionine--tRNA ligase [Mycoplasma crocodyli MP145] gi|291600499|gb|ADE19995.1| methionine--tRNA ligase [Mycoplasma crocodyli MP145] Length = 517 Score = 295 bits (756), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 169/512 (33%), Positives = 277/512 (54%), Gaps = 17/512 (3%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +++ YI+T I Y + HIGH Y +A +A + +L+G DV F TG+DEHGQKI Sbjct: 5 MNKKKTFYITTPIYYASGNLHIGHLYTTTLAWSIANYKKLNGYDVKFLTGSDEHGQKIFL 64 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A A V + +VD+ ++ M I YD F RTT K H T + ++ ++G IY Sbjct: 65 KANEANVKPQKYVDELVETYKKMWTDFGIDYDFFSRTTNKNHVKTIQEIFDFFLNEGIIY 124 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSY 179 KG Y G YS+ DE + + G Y++ N ++ ++EE YFF++S + + L+ Sbjct: 125 KGNYEGLYSISDEEFLTKSQAICDESGNYFHPTSNHKLELVKEESYFFKMSKFSEWLIEQ 184 Query: 180 YESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238 +++P ++ P + NE++ +F+ GL+DLS++R +WGIK +D ++ +YVW+DAL NY Sbjct: 185 IKNNPTWLNPQKTVNEIMNNFLLKGLEDLSVTRTNVEWGIKTLNDDKHTIYVWLDALCNY 244 Query: 239 LTTTGY-LDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 ++ G+ + K+W +H++GK+I RFH IYWP FL + N+ P K+ SHG Sbjct: 245 ISALGFDIKESSTDFVKYWQNGDEIVHLLGKEIARFHFIYWPIFLKALNIKQPTKLISHG 304 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 +I+ K+SKS NVIDP +++++ + ++YF V +I G DG +D + + +N++L Sbjct: 305 WIITPTGKMSKSKNNVIDPYDLLKKYHPEMIKYFFVSKINIGDDGVFDIENFENIINSEL 364 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N GNLVSR++ MI + I + ++I +E M N + L Sbjct: 365 INNYGNLVSRTLKMISNSFSNGINFHKSIKTIHKNIEQEIINSKEEFINKMDNYELSEGL 424 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 I+L S +++Y D PW+L + N + VL + I ++ L +P+ KI Sbjct: 425 KIAINLSSNLNKYIDETTPWKLTE-NKEELELVLSRLLNGIYAVSSYLSIVMPQ---KIL 480 Query: 475 DILFVADENRCFQSLDQRLK-------PGFML 499 D+ + N F ++ K P FML Sbjct: 481 DVSKALNINLSFDKIENFNKFDGVISAPKFML 512 >gi|116198129|ref|XP_001224876.1| hypothetical protein CHGG_07220 [Chaetomium globosum CBS 148.51] gi|88178499|gb|EAQ85967.1| hypothetical protein CHGG_07220 [Chaetomium globosum CBS 148.51] Length = 797 Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 173/512 (33%), Positives = 260/512 (50%), Gaps = 54/512 (10%) Query: 3 EREKLYISTAIAYPNA----QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58 E + Y++T I Y NA +PHIGH Y M++ADV R+ L G F TGTDEHG K+ Sbjct: 37 EDKPFYVTTPIFYVNAVRLVEPHIGHMYSMVLADVFKRWQTLIGKKAFFVTGTDEHGMKV 96 Query: 59 AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 +AA A K D+N+ F ++A + I YD F+RTT++ H W + K Sbjct: 97 QQAAALADKEPKQLCDENAEKFEELARMARIDYDRFMRTTDRDHVQAVEHFWSSSTRKP- 155 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 + GA N V+W+EE+ Y FR++ +D+LL Sbjct: 156 -----------------------FTGAVYMASAETKNKVEWVEEKNYCFRMTELKDRLLD 192 Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALT 236 +YE +P +I P R NEV+ +VK+ +DLS+SR + WGI++P+DP +YVW+DAL Sbjct: 193 FYEKNPGWIEPASRMNEVVDWVKNHFEDLSISRPVQRLSWGIRVPEDPSQTIYVWVDALI 252 Query: 237 NYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+T G+ D P S WPAD+HVIGKDILRFH +YWPA L++ ++PLPKKV H Sbjct: 253 NYITAAGFPDWTPGESHKGGWPADVHVIGKDILRFHCVYWPALLMALDIPLPKKVLVHSH 312 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL--------- 346 +K+SKS+GNV++P+ + GVDA RY+L+ + D Y D L Sbjct: 313 WTLNNKKMSKSVGNVVNPLYAMNRWGVDATRYYLLAQGGIADDANYANDHLVIKYKKYLQ 372 Query: 347 ------KKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVL 398 R+ A + ++V+RS D+D M+ + P + + Sbjct: 373 GGLGNLLGRLTRPKAWNVRDIVTRSPPD--HDFDVMMHSFMPKEIRLDLHATEQMLKGAA 430 Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR----ASTVLYVTVEV 454 + M+ A+ ++ + + ++ ++PW L K+ A L++ E Sbjct: 431 PIVASRMEKHEPKEAIRKIFKISTTLNELLSRREPWALVKSEDAADHAVADKTLFLVAEG 490 Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCF 486 +R ILLQ F+P A ++ D L VA + R F Sbjct: 491 LRISGILLQPFLPDKAAQLLDTLGVARDKRTF 522 >gi|222083048|ref|YP_002542413.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84] gi|221727727|gb|ACM30816.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84] Length = 521 Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 177/523 (33%), Positives = 283/523 (54%), Gaps = 37/523 (7%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T+I Y NA PH+G A E++ AD AR RL G DV F GTD++ K +AA+ AG Sbjct: 7 YITTSIPYVNAAPHVGFALELVQADAYARHSRLLGRDVRFQCGTDDNSLKNVRAAEAAGR 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC-RILWKKISDKGDIYKGCYSG 126 FV +N+ F + L+IS D F+RT+ H TC LW + GD+Y+ Y G Sbjct: 67 PVADFVGENADRFEKLGRRLNISNDAFVRTSTDPRHITCVHSLWNACAKNGDLYRKSYEG 126 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 +Y + E +Y E+ DG+ +H P++ ++EE +FFRLS Y D+L E+ Sbjct: 127 FYCVGCEQFY---ELPDLDDGRC--PEHGIPLEIVKEENWFFRLSRYGDRLRHLIETEEL 181 Query: 186 FILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 ++P+ RRNE+++ ++ GL+D+S+SR + WG+ +P + ++YVW DAL NYLT Sbjct: 182 KVVPVHRRNEILALLRRGLEDISVSRSAERARGWGVPVPGTDE-VIYVWFDALANYLTGL 240 Query: 243 GYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 GY + + ++W H +GK I +FHAIYWPA LLSA +PLP +F HG++ Sbjct: 241 GYGSDETLFR-QYWAQQGERTHFVGKGISKFHAIYWPAVLLSAGVPLPSSIFVHGYLTVD 299 Query: 300 GEKISKSLGNVIDPIEVIEEVGV-DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 G KI KS GN IDP ++E DALRY+L+R I DG + ++ L+ + +L + Sbjct: 300 GRKIGKSAGNGIDPDGLVEYYQTPDALRYYLLRHIRSADDGDFSEERLEAAWSGELGGQL 359 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 GNLV+R ++++ + G+ P T D +++ + + ++I + + +H L ++ Sbjct: 360 GNLVNRVLTLLASSFSGVTP-----TVPDSALVREATGLPEKISKAFDDYELHLGLTEIF 414 Query: 419 SLVSEVDRYFDAQKPW--------ELKKTN----PDRASTVLYVTVEVIRQLAILLQAFV 466 S + +R F + PW EL + DR L V + +A L F+ Sbjct: 415 SYLGSANREFTRKAPWSDAKALAGELGRAERQIISDRLGATLAEQVYGLAIVARCLLPFL 474 Query: 467 PKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 P+ A+++ L ++ C + D + M + + +FPR Sbjct: 475 PESASRLHTKLGIS----CPERYDVPVAVNGMETSSGEVLFPR 513 >gi|156538451|ref|XP_001606422.1| PREDICTED: similar to GH13807p [Nasonia vitripennis] Length = 522 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 165/466 (35%), Positives = 255/466 (54%), Gaps = 26/466 (5%) Query: 42 GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101 G + TGTDEHG K+ +AA++ V T + S+ FRDM D D+ Y FIRTT+ Sbjct: 30 GHVTVLNTGTDEHGNKVQQAAKSFNVPTDQYCKITSQKFRDMCDTFDVDYATFIRTTDPA 89 Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY--KGADGQYYNAQHNP--- 156 H +T + W+ + ++ IYKG Y+GWY + +EA+ ++ ++ K A G+ Sbjct: 90 HQETVQNFWRLLEERNHIYKGKYAGWYCVSEEAFLSNQDLIEKKTASGETIRVSAESGHV 149 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--LKDLSLSRKT- 213 V+W EEE Y FRLSA+QD L + + + + P ++ +V+ G + DLS+SR Sbjct: 150 VEWAEEENYKFRLSAFQDDLKHWLKDE-KVVQPSTFHKILLQWVEEGSCMADLSISRPAN 208 Query: 214 -FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA 272 WGI P DP +YVW+DAL NYLT GY PD +FWP + VIGKDIL+FH Sbjct: 209 RSPWGIPTPSDPNQTIYVWLDALVNYLTALGY---PDQKFKEFWPPTVQVIGKDILKFHG 265 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 IYWPAFL++A L PK +F H GEK+SKS GNV+ P + ++ + LRYFL+R+ Sbjct: 266 IYWPAFLIAAGLEPPKTLFCHSHWTVDGEKMSKSRGNVVSPFDAAQQFTTEGLRYFLLRD 325 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-----TESD 387 D Y + + +N++LA+ +GNLVSR ++ + IP+ + +E Sbjct: 326 SVPHNDSNYSTERVLNILNSELADTLGNLVSRCTGKVV-NPKSEIPSAAIYAKELKSEPA 384 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--- 444 E++ + + +++ ++ +H A+ V+S + + + KPW L+K PD Sbjct: 385 ETLRKSMESLGEITKQHYESFYVHHAIDAVMSTLRSANIMIEHHKPWVLRK-EPDNEIAI 443 Query: 445 ---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487 +V+ + +E R AI L VPKL+ + D L V + R ++ Sbjct: 444 TELKSVIALALEATRISAIALYPVVPKLSCNLLDFLNVPNNARLWK 489 >gi|196228014|ref|ZP_03126881.1| methionyl-tRNA synthetase [Chthoniobacter flavus Ellin428] gi|196227417|gb|EDY21920.1| methionyl-tRNA synthetase [Chthoniobacter flavus Ellin428] Length = 545 Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 181/503 (35%), Positives = 280/503 (55%), Gaps = 34/503 (6%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E +I+TAI Y N PHIGHAYE ++ADVLARFHRL G DV F TG D+HGQK+ ++A+ Sbjct: 3 ETFFITTAIDYTNGAPHIGHAYEKVLADVLARFHRLKGEDVFFLTGVDQHGQKVQQSAEK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI-SDKGD----- 118 V + FVD + F + L++ YD + TT+ +H R + +++ DKG+ Sbjct: 63 QSVEPQQFVDGITAKFLALWKKLEVEYDGWAATTDPKHKQCVRAILQRLWDDKGEDGQSK 122 Query: 119 -IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 +YK G+YS+R E + D E +G DG+ + + V++ EEE ++FRL ++ LL Sbjct: 123 WLYKKSAGGYYSVRQEQFLTDKE--RGPDGE-FGPEWGQVEFREEENFYFRLLPHKQWLL 179 Query: 178 SYYESHPE----FILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDD--PQYIMY 229 ++ + ++P R E+ + V+ DL +SR WGI P+ ++ + Sbjct: 180 DLIDARSKAGQPLVVPDFRVAELRNAVEKLEGDLCISRPDTRLKWGIPFPESFGAGFVTF 239 Query: 230 VWIDALTNYLTTTGYLD----NPDGSKAKFWPADLHVIGKDIL-RFHAIYWPAFLLS--- 281 VW DAL NY++ D P ++W +HVIGKDIL H +YWP L + Sbjct: 240 VWFDALVNYISFAPDYDPTAARPSEKFLQYWRNIVHVIGKDILIPAHGVYWPIMLKAIGF 299 Query: 282 ANLPLPKKVFSHGFILHKG-----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 A+ +P + HG+ KG EK+SK+LGNV+DP + ++ G +A+RY+L+ +IA G Sbjct: 300 ADEEIP-TLLVHGWWNIKGKGGESEKMSKTLGNVVDPDLLADKYGAEAVRYYLMSDIATG 358 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396 KD + ++ L +R N DLAN +GNL++R+++M+ K +G++ A +S E Sbjct: 359 KDSDFSEERLIQRFNTDLANSLGNLLNRTLNMVAKYREGILKRTDADAQSPEFAREGVEA 418 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEV 454 + I L+H A+ + I++ ++ DA+KPW L K T +R VLY E Sbjct: 419 YVSNINPANAEPLLHHAIDRAINIAVACNQSIDAEKPWALAKDATQAERLDAVLYRLAES 478 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 +R AILL +PK A+ IFD L Sbjct: 479 LRITAILLSPVLPKSAHGIFDQL 501 >gi|320592228|gb|EFX04667.1| methionyl-tRNA synthetase [Grosmannia clavigera kw1407] Length = 630 Score = 293 bits (749), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 187/556 (33%), Positives = 286/556 (51%), Gaps = 72/556 (12%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 Y++T I Y N+ PH+GH Y M++ADVL R+ L G L TGTDEHG K+ +AA AGV Sbjct: 48 YVTTPIFYVNSDPHVGHMYSMVLADVLKRWQTLQGRRALLCTGTDEHGMKVQQAATRAGV 107 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 K F D+N+ F D+A ++ D FIRTT+ H R +W+++ +G +Y+ + GW Sbjct: 108 APKQFCDENAAVFADLARRAQLANDFFIRTTDSDHVAAVRAIWRRLRRRGYVYQTKHQGW 167 Query: 128 YSLRDEAYYNDDEVYK---GADGQ---YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y + DE +Y + V K A G+ V+W EE Y FR++A +D+LL Y Sbjct: 168 YCVSDETFYPEALVEKRIAAATGRVEMVSTETGKTVEWTEEINYHFRMTAVRDRLLQLYA 227 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239 + P+F++P R EV+ +V + L+DLS+SR WG+ +P+D +YVW+DAL NYL Sbjct: 228 ARPDFVVPAARMAEVVHWVTNQLEDLSISRPASRLTWGVAVPEDASQTIYVWVDALVNYL 287 Query: 240 TTTGYLDNPDGS---------------------------------------KAKFWPADL 260 T GY D +G +A WPAD+ Sbjct: 288 TKAGYPDRWEGGEEGDADQGQVRAVASSNSSSYPQAVSSSSVPTPEQRQRQEAGGWPADV 347 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 V+GKDI+RFHA+YWPA LL+ +LP+P+++ SH +K+SKS GNV++P ++ Sbjct: 348 QVMGKDIVRFHAVYWPALLLALDLPVPRQLLSHAHWTLGRKKMSKSDGNVVNPFYAMDRF 407 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-----DG 375 GVDA+RY+LV + +D Y + + +R L G+GNL+ R + + + Sbjct: 408 GVDAMRYYLVYDGGVEQDADYGNEHIVERYKKGLQGGLGNLLGRIMRTTRWNVREAVEEA 467 Query: 376 MIPTPGAFTESDESILSVCSRV--LQEIRENMQNQLIHR-ALAQVISLVSEVDRYFDAQK 432 + S+ + S + + + ++L R AL V+ LV + +R+ Sbjct: 468 TAAGKAGMAAPEPSLETQASAIDGIAAVAAGHMDRLDARGALRAVMGLVYQTNRFVHENA 527 Query: 433 PWELKKTNPD---------------RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 PW L +T R V+++ E +R ++ILLQ +P A ++ D+L Sbjct: 528 PWTLARTADVADEAGAVDVAAADRLRMRQVVFLAAEALRVVSILLQPVMPAKAAEVLDVL 587 Query: 478 FVADENRCFQSLDQRL 493 VA R FQ D RL Sbjct: 588 GVASGRRTFQ--DARL 601 >gi|170595342|ref|XP_001902341.1| methionyl-tRNA synthetase [Brugia malayi] gi|158590031|gb|EDP28810.1| methionyl-tRNA synthetase, putative [Brugia malayi] Length = 468 Score = 293 bits (749), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 167/448 (37%), Positives = 246/448 (54%), Gaps = 24/448 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDV-----LFTTGTDEHGQKI 58 R K +I+T I Y N PHIGH Y ++ADV R+ L G DV LFTTGTDEHG KI Sbjct: 20 RLKHFITTPIFYANGPPHIGHLYTALLADVSNRWKLLKGGDVDLNNSLFTTGTDEHGLKI 79 Query: 59 AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 + A AG + + D S F+D+ I +DFIRTTE RH + + +WK++ +G Sbjct: 80 QQTATTAGCDPQRYCDDISDKFKDLFRAFGIQPNDFIRTTETRHKEVVKHVWKELDKRGL 139 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 I +G + GWYS DE +Y +DEV K G + + V+W++EE Y F L Y + Sbjct: 140 IQRGKHEGWYSTVDECFYANDEVEKLDGQTSAVSKSTGSVVEWVQEENYIFPLFKYLGAV 199 Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDA 234 ++ S+ + I P E + S +DLSLSR K WGI +P+D +YVW DA Sbjct: 200 RNWL-SNCDVIRPKVYFPEALQHA-SVERDLSLSRDRKRVTWGIAVPNDESQTIYVWFDA 257 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L NYLT +G N K+ WP ++GKDIL+FHA+ WPAFLL+ +LPLPK++F H Sbjct: 258 LVNYLTVSGVFSN---KKSSIWPPTCQIVGKDILKFHAVIWPAFLLALDLPLPKRIFVHS 314 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 L G K+SKS+GNV+DP + + + LRYFL+R+ D + VN DL Sbjct: 315 HWLVDGVKMSKSIGNVVDPFTASKSLSEEGLRYFLLRQGTPQNDANFTMLKAVNVVNTDL 374 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI-------RENMQN 407 N +GNL+ RS + + P ++S ++L + +++ I E Sbjct: 375 INNVGNLLQRST---IGKLNPSQTYPAFHSDSFRNLLELGEPLIESINCLTEVYEEQFDE 431 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWE 435 +I++AL ++ ++ + + +F +PW+ Sbjct: 432 LMIYKALELLMDVMRQTNGFFQFYEPWK 459 >gi|294659967|ref|XP_462418.2| DEHA2G20130p [Debaryomyces hansenii CBS767] gi|199434368|emb|CAG90928.2| DEHA2G20130p [Debaryomyces hansenii] Length = 589 Score = 292 bits (748), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 178/532 (33%), Positives = 272/532 (51%), Gaps = 56/532 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-GLDVLFTTGTDEHGQKIAKAAQNA 65 YI++ I Y NA+PH+GH Y M++ D R+ +LD F TGTDEHG KI AA+ Sbjct: 25 FYITSPIFYVNARPHLGHLYSMLLCDTRNRWEKLDPNKSSFFLTGTDEHGLKIQTAAEKL 84 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T K DQ S NF+++ ++I+YD FIRTT++ H T + W + +KG +Y+G +S Sbjct: 85 GMTPKDLTDQVSTNFKNLGQKVNIAYDRFIRTTDEDHVKTVQYFWSVMEEKGFLYQGSHS 144 Query: 126 GWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 GWY++ DE +Y ++ + G N V + EE YFFRLS +QD+L+++ Sbjct: 145 GWYAVSDETFYPATQIEEMVDPTTGEKKMISKETKNEVVYQEETNYFFRLSHFQDRLIAF 204 Query: 180 YESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALT 236 ES+P+FI P + E++ ++ L DLS+SR + WGI++P D +YVW DAL Sbjct: 205 LESNPDFIKPKSKYTELLRELTENKLTDLSVSRPSSRLTWGIEVPGDSSQKIYVWFDALL 264 Query: 237 NYLTTTGYLDNPDGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289 NY+T G+ + K+ WPA H+IGKDI+RFH IYWP FL++A + +P++ Sbjct: 265 NYITACGFPEKFPIVNEKYQTEPSNMWPA-THIIGKDIIRFHCIYWPIFLMAAGIDMPRQ 323 Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 V H L G K+SKSLGNV+DP+E ++ G DALR+FL D Y++ Sbjct: 324 VVVHSHWLCDGFKMSKSLGNVVDPLETLDYYGEDALRFFLTEYSNIESDCNYNEQYF-YL 382 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVC-------------- 394 +L NL++R + + G F D I C Sbjct: 383 TRENLIGKYANLITRCGGNAFNILESVKSFQAGEFDNIDVLIRDHCLNNEKTNESKQIIA 442 Query: 395 -SRVLQEIRENMQNQL--------IHRALAQVISLVSEVDRYFDAQKPWELKKT-NPDRA 444 L EI N+ + R + + + + + ++ F +PW K+ D Sbjct: 443 LKNELSEILNNLYTSMDMSMSSFDQMRTIQKWWAPLEKANQLFQLGQPWLYTKSLKSDTV 502 Query: 445 ST------------VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 S +++ E R +IL+ +P L++KI D L V+ +NR Sbjct: 503 SDDDKEIHKLIQNYYVFMAAETSRICSILINPIIPNLSSKILDRLAVSPQNR 554 >gi|3998|emb|CAA32778.1| unnamed protein product [Saccharomyces cerevisiae] Length = 575 Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 176/522 (33%), Positives = 276/522 (52%), Gaps = 49/522 (9%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++T I YPNA+PH+GH Y +++DV R+ G FTTGTDEHG KI A+++ G Sbjct: 16 HVTTPIFYPNAKPHLGHLYSSLLSDVYHRWQLFKGNLSFFTTGTDEHGLKIQCASESNGF 75 Query: 68 -TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 K FVD+ F + + I+Y FIRTT+ H + LW+ G IY G + G Sbjct: 76 DQPKKFVDKLYPEFVQLDKIYGINYTRFIRTTDPDHIENVMKLWELCLKNGYIYMGEHKG 135 Query: 127 WYSLRDEAYYNDDEVYKGA--DGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 WYS+ DE +Y + +V K DG+Y N + N V + E YFFRLS + K++ + + Sbjct: 136 WYSISDETFYPESKVIKDPKNDGKYLNTESKNEVVYQSETNYFFRLSLFNKKIVDHIRKN 195 Query: 184 PEFILPIERRNEVISFVKSG--LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239 P+FI P +R++++ +++G L DLS+SR + WGI P+DP +YVW DAL NYL Sbjct: 196 PDFIFPASKRDQILKELETGGTLPDLSISRPSARLKWGIPTPNDPSQKVYVWFDALCNYL 255 Query: 240 TTTG----------------YLD--NPDGSKAKFWPAD-----LHVIGKDILRFHAIYWP 276 ++ G Y D N G +P + +HVIGKDI +FH +YWP Sbjct: 256 SSIGGIPSILSNATEVVSRHYSDKSNVKGQLLIPYPKEVQRNTIHVIGKDIAKFHTVYWP 315 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 +FLL+A LPLP+++ HG L G K+SKSLGNV+DPI++ G D +R+FL+ Sbjct: 316 SFLLAAGLPLPRQIVVHGHWLCNGMKMSKSLGNVVDPIDMARYYGADIVRWFLLENSKLE 375 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVS---------MILKD-----YDGMIPTPGA 382 +DG + + L + L + GNL++R M D + + Sbjct: 376 EDGDFQEAKLYE-TRELLVSKWGNLINRCCGSKFNIERAVMKFSDKANFQFQEIFQNEPI 434 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 +E E++ + ++ + E + + L V S++++ + KPWE + D Sbjct: 435 VSERIENLAKLLNKSQEVFDEKIAIFQYPQLLRHVWSIINDANTLVQNSKPWEREL---D 491 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + ++++ +E R L+IL Q+ +P L+ D + V+ E R Sbjct: 492 QQDNIIFLAMETSRILSILCQSIIPSLSQSFLDRIDVSKEKR 533 >gi|6321610|ref|NP_011687.1| Msm1p [Saccharomyces cerevisiae S288c] gi|1711640|sp|P22438|SYMM_YEAST RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|1323302|emb|CAA97197.1| MSM1 [Saccharomyces cerevisiae] gi|285812366|tpg|DAA08266.1| TPA: Msm1p [Saccharomyces cerevisiae S288c] Length = 575 Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 176/522 (33%), Positives = 276/522 (52%), Gaps = 49/522 (9%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++T I YPNA+PH+GH Y +++DV R+ G FTTGTDEHG KI A+++ G Sbjct: 16 HVTTPIFYPNAKPHLGHLYSSLLSDVYHRWQLFKGNLSFFTTGTDEHGLKIQCASESNGF 75 Query: 68 -TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 K FVD+ F + + I+Y FIRTT+ H + LW+ G IY G + G Sbjct: 76 DQPKKFVDKLYPEFVQLDKIYGINYTRFIRTTDPDHIENVMKLWELCLKNGYIYMGEHKG 135 Query: 127 WYSLRDEAYYNDDEVYKGA--DGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 WYS+ DE +Y + +V K DG+Y N + N V + E YFFRLS + K++ + + Sbjct: 136 WYSISDETFYPESKVIKDPKNDGKYLNTESKNEVVYQSETNYFFRLSLFNKKIVDHIRKN 195 Query: 184 PEFILPIERRNEVISFVKSG--LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239 P+FI P +R++++ +++G L DLS+SR + WGI P+DP +YVW DAL NYL Sbjct: 196 PDFIFPASKRDQILKELETGGTLPDLSISRPSARLKWGIPTPNDPSQKVYVWFDALCNYL 255 Query: 240 TTTG----------------YLD--NPDGSKAKFWPAD-----LHVIGKDILRFHAIYWP 276 ++ G Y D N G +P + +HVIGKDI +FH +YWP Sbjct: 256 SSIGGIPSILSNATEVVSRHYSDKSNVKGQLLIPYPKEVQRNTIHVIGKDIAKFHTVYWP 315 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 +FLL+A LPLP+++ HG L G K+SKSLGNV+DPI++ G D +R+FL+ Sbjct: 316 SFLLAAGLPLPRQIVVHGHWLCNGMKMSKSLGNVVDPIDMARYYGADIVRWFLLENSKLE 375 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVS---------MILKD-----YDGMIPTPGA 382 +DG + + L + L + GNL++R M D + + Sbjct: 376 EDGDFQEAKLYE-TRELLVSKWGNLINRCCGSKFNIERAVMKFSDKANFQFQEIFQNEPI 434 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 +E E++ + ++ + E + + L V S++++ + KPWE + D Sbjct: 435 VSERIENLAKLLNKSQEVFDEKIAIFQYPQLLRHVWSIINDANTLVQNSKPWEREL---D 491 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + ++++ +E R L+IL Q+ +P L+ D + V+ E R Sbjct: 492 QQDNIIFLAMETSRILSILCQSIIPSLSQSFLDRIDVSKEKR 533 >gi|50290389|ref|XP_447626.1| hypothetical protein [Candida glabrata CBS 138] gi|49526936|emb|CAG60563.1| unnamed protein product [Candida glabrata] Length = 584 Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 172/524 (32%), Positives = 281/524 (53%), Gaps = 54/524 (10%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQ-NA 65 +++T I YPNA+PH+GH Y ++ D+ R+ L+G LFTTGTDEHG KI AA+ N Sbjct: 32 HVTTPIFYPNAKPHLGHLYSSLLCDIYHRWQVLNGDSAALFTTGTDEHGLKIQLAAEKNN 91 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + K FVD+ F ++ DISY FIRTT+ H + ++LW + G IYKG + Sbjct: 92 CESPKAFVDKLYPEFVELDKTYDISYTRFIRTTDPDHIENVKLLWNLCLENGYIYKGKHE 151 Query: 126 GWYSLRDEAYYNDDEVYKGADG--QYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182 GWYS+ DE +Y +V K + +Y N + N V EE Y+F+LS++++KL+++ Sbjct: 152 GWYSISDETFYPSSKVIKDPNNPNKYINTESLNEVIHQSEENYYFKLSSFKEKLINHITE 211 Query: 183 HPEFILPIERRNEVISFVKSG---LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237 P+F+ P +R++++ +K+ KD+S+SR WGI++P+DP +YVW DAL N Sbjct: 212 FPDFVHPPSKRDQILRDLKNDPNITKDISISRPATRLQWGIEVPNDPSQKVYVWFDALCN 271 Query: 238 YLTTTGYLDNPDGSK------------------AKFWPADLHVIGKDILRFHAIYWPAFL 279 Y+++ G ++ +K W +HVIGKDI +FH I+WP+FL Sbjct: 272 YISSIGGIEAVKQNKRALSNHILGNSDITVYQPTNVWKDTVHVIGKDIEKFHIIFWPSFL 331 Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 L+ANLPLPK++ H L G K+SKSLGNV++P+++ G D +R+FL+ +DG Sbjct: 332 LAANLPLPKQIVVHSHWLCNGFKMSKSLGNVVEPMKISSHYGTDMVRWFLMENSKVEEDG 391 Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSM-----------------ILKDYDGMIPTPGA 382 + ++ L + GNL++R +L D++ + Sbjct: 392 DFQEEKLFATTEL-FVSKWGNLINRCCGAKFNIERSVHKYARNSEEVLADFEKIYIDNDM 450 Query: 383 FTESDESILSVCSRVLQEIR--ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 ++ I V +L + E Q L+ + + +++ + F +PW K Sbjct: 451 IIQARSLIQDVDQLILNAGKYYEKFQYNLL---IKDIWKIINSTNSLFQYAEPW---KKL 504 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 ++ ++++ ++ R LAIL Q +P+L++K+ D L V E R Sbjct: 505 GEQQDIIIFLCADISRVLAILTQPIIPQLSHKLLDHLKVDQERR 548 >gi|151943449|gb|EDN61760.1| mitochondrial methionyl-tRNA synthetase [Saccharomyces cerevisiae YJM789] gi|190406813|gb|EDV10080.1| methionine-tRNA ligase [Saccharomyces cerevisiae RM11-1a] gi|207345027|gb|EDZ71977.1| YGR171Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256272049|gb|EEU07062.1| Msm1p [Saccharomyces cerevisiae JAY291] gi|259146676|emb|CAY79933.1| Msm1p [Saccharomyces cerevisiae EC1118] gi|323337473|gb|EGA78721.1| Msm1p [Saccharomyces cerevisiae Vin13] gi|323348442|gb|EGA82687.1| Msm1p [Saccharomyces cerevisiae Lalvin QA23] gi|323354852|gb|EGA86685.1| Msm1p [Saccharomyces cerevisiae VL3] Length = 575 Score = 290 bits (741), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 176/522 (33%), Positives = 276/522 (52%), Gaps = 49/522 (9%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++T I YPNA+PH+GH Y +++DV R+ G FTTGTDEHG KI A+++ G Sbjct: 16 HVTTPIFYPNAKPHLGHLYSSLLSDVYHRWQLFKGNLSFFTTGTDEHGLKIQCASESNGF 75 Query: 68 -TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 K FVD+ F + + I+Y FIRTT+ H + LW+ G IY G + G Sbjct: 76 DQPKKFVDKLYPEFVQLDKIYGINYTRFIRTTDPDHIENVVKLWELCLKNGYIYMGEHKG 135 Query: 127 WYSLRDEAYYNDDEVYKGA--DGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 WYS+ DE +Y + +V K DG+Y N + N V + E YFFRLS + K++ + + Sbjct: 136 WYSISDETFYPESKVIKDPKNDGKYLNTESKNEVVYQSETNYFFRLSLFNKKIVDHIRKN 195 Query: 184 PEFILPIERRNEVISFVKSG--LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239 P+FI P +R++++ +++G L DLS+SR + WGI P+DP +YVW DAL NYL Sbjct: 196 PDFIFPASKRDQILKELETGGTLPDLSISRPSARLKWGIPTPNDPSQKVYVWFDALCNYL 255 Query: 240 TTTG----------------YLD--NPDGSKAKFWPAD-----LHVIGKDILRFHAIYWP 276 ++ G Y D N G +P + +HVIGKDI +FH +YWP Sbjct: 256 SSIGGIPSILSNATEVVSRHYSDKSNVKGQLLIPYPKEVQRNTIHVIGKDIAKFHTVYWP 315 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 +FLL+A LPLP+++ HG L G K+SKSLGNV+DPI++ G D +R+FL+ Sbjct: 316 SFLLAAGLPLPRQIVVHGHWLCNGMKMSKSLGNVVDPIDMARYYGADIVRWFLLENSKLE 375 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVS---------MILKD-----YDGMIPTPGA 382 +DG + + L + L + GNL++R M D + + Sbjct: 376 EDGDFQEAKLYE-TRELLVSKWGNLINRCCGSKFNIERAVMKFSDKANFQFQEIFQNEPI 434 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 +E E++ + ++ + E + + L V S++++ + KPWE + D Sbjct: 435 VSERIENLAKLLNKSQEVFDEKIAIFQYPQLLRHVWSIINDANTLVQNSKPWEREL---D 491 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + ++++ +E R L+IL Q+ +P L+ D + V+ E R Sbjct: 492 QQDNIIFLAMETSRILSILCQSIIPSLSQSFLDRIDVSKEKR 533 >gi|238809991|dbj|BAH69781.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 516 Score = 289 bits (739), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 172/492 (34%), Positives = 271/492 (55%), Gaps = 21/492 (4%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 MK+++ YI+T I Y + HIGH Y I+A V+ + R+ G D TG+DEHGQKI + Sbjct: 3 MKKQKTFYITTPIYYASGPLHIGHLYCTIMAWVIRNYKRVLGYDAKLLTGSDEHGQKIQE 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A A K +VD +++++M +I YD F RTTE H + ++ KG IY Sbjct: 63 KALVAKKEPKQYVDDLVKSYKEMWAKWEIDYDYFSRTTESFHEQAVQKIFSYFLQKGLIY 122 Query: 121 KGCYSGWYSLRDEAYYNDDE-VYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDKLL 177 KG Y G YS++DE + ++ VYK DG+YY+ ++H + MEEE YFF+++ Q Sbjct: 123 KGSYQGLYSVQDEEFLTKNQAVYK--DGKYYHPSSKHELIN-MEEESYFFKMNEVQKWWS 179 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 Y + HP+F+LP + NE+ +FVK GL+DLS++R W I DDP++ +YVW DAL Sbjct: 180 KYNKKHPDFLLPKKVVNEMTNNFVKEGLEDLSVTRTNVKWAIPTIDDPKHTIYVWFDALF 239 Query: 237 NYLTTTGY-LDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 NY+T G+ + P K+W +H++GK+I RFH IYWP L + LP + S Sbjct: 240 NYITKLGFDFNKPKDDFVKYWKNGDEIVHILGKEIARFHFIYWPIVLNCLGIKLPNHIVS 299 Query: 293 HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 HG + K G K+SKSL NVI P + ++ + ++Y+ +I G+DG + ++ LK+ VN Sbjct: 300 HGLLRDKDGLKMSKSLNNVIAPDYLFDKYHHEMIKYYFATQIIFGEDGNFSEEKLKEVVN 359 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-- 409 ADL N GNLVSR++ MI + P ++ + + I + ++ Q + Sbjct: 360 ADLINNYGNLVSRTLKMIHNSF----PKGLLYSVNSKKIHKDIEKEIKNFSAQFQKHMDA 415 Query: 410 --IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 I + + I L +++++Y D PW+L + +L + I ++ LQ +P Sbjct: 416 FEIDKGFKKAIELSAKLNKYIDETTPWKL-TDKLEELEPILVRLLNGIYAVSCALQIVLP 474 Query: 468 KLANKIFDILFV 479 ++ +L V Sbjct: 475 TKIKEVASVLKV 486 >gi|153005950|ref|YP_001380275.1| tRNA synthetase class I (M) [Anaeromyxobacter sp. Fw109-5] gi|152029523|gb|ABS27291.1| tRNA synthetase class I (M) [Anaeromyxobacter sp. Fw109-5] Length = 524 Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 164/439 (37%), Positives = 246/439 (56%), Gaps = 12/439 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y++T+I Y NA PH+G A E+ +AD AR R G V F TGTD+H K AA+ Sbjct: 6 QETSYVTTSIPYVNANPHLGFALELCVADAFARHRRARGRRVRFVTGTDDHSLKNVIAAE 65 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDIYKG 122 AGV T +V ++ F + L IS ++F RT+ H R LW+ + +GD+Y+ Sbjct: 66 RAGVPTAQWVADHAAAFEALNGALGISANEFQRTSASPAHGPAVRALWEACARRGDLYRR 125 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G Y + E +Y +E+ G ++ P++ +EE +FFRLS + D + ES Sbjct: 126 PYRGQYCVGCERFYEPEELANGRCPEH----DAPLETIEETNWFFRLSRHADVVREAIES 181 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYL 239 I+ R E ++F++ ++D+S+SR + WG+ +P DP +++VW DAL YL Sbjct: 182 GRLRIVHEGAREETLAFLRGPVRDISVSRSAARARGWGLPVPADPSQVVWVWFDALCGYL 241 Query: 240 TTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 GY G FW D +HVIGK I RFHA+YWPAFL SA LP P + HG++ Sbjct: 242 AALGYGGIDAGLLDAFWCGDGERVHVIGKGIARFHAVYWPAFLESAGLPWPTDLLVHGYV 301 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 +GEKISKS G IDP +I E G DA+RYFL+R I +DG + ++ +A+LAN Sbjct: 302 TVEGEKISKS-GRTIDPAPLIAEYGADAVRYFLLRHIRTARDGDFSIARFRQAHDAELAN 360 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 G+GNL SR ++++ K +G++P PG DE + ++ E+ + + + AL+ Sbjct: 361 GLGNLASRILALVAKLTNGLVPAPGVELARDEDLRREALKLPSEVDDAVDRLSLDGALSA 420 Query: 417 VISLVSEVDRYFDAQKPWE 435 + LV +R+ PWE Sbjct: 421 IFRLVDATNRFLTIAAPWE 439 >gi|319777619|ref|YP_004137270.1| methionyl-tRNA synthetase [Mycoplasma fermentans M64] gi|318038694|gb|ADV34893.1| Methionyl-tRNA synthetase [Mycoplasma fermentans M64] Length = 514 Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 172/492 (34%), Positives = 271/492 (55%), Gaps = 21/492 (4%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 MK+++ YI+T I Y + HIGH Y I+A V+ + R+ G D TG+DEHGQKI + Sbjct: 1 MKKQKTFYITTPIYYASGPLHIGHLYCTIMAWVIRNYKRVLGYDAKLLTGSDEHGQKIQE 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A A K +VD +++++M +I YD F RTTE H + ++ KG IY Sbjct: 61 KALVAKKEPKQYVDDLVKSYKEMWAKWEIDYDYFSRTTESFHEQAVQKIFSYFLQKGLIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDE-VYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDKLL 177 KG Y G YS++DE + ++ VYK DG+YY+ ++H + MEEE YFF+++ Q Sbjct: 121 KGSYQGLYSVQDEEFLTKNQAVYK--DGKYYHPSSKHELIN-MEEESYFFKMNEVQKWWS 177 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 Y + HP+F+LP + NE+ +FVK GL+DLS++R W I DDP++ +YVW DAL Sbjct: 178 KYNKKHPDFLLPKKVVNEMTNNFVKEGLEDLSVTRTNVKWAIPTIDDPKHTIYVWFDALF 237 Query: 237 NYLTTTGY-LDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 NY+T G+ + P K+W +H++GK+I RFH IYWP L + LP + S Sbjct: 238 NYITKLGFDFNKPKDDFVKYWKNGDEIVHILGKEIARFHFIYWPIVLNCLGIKLPNHIVS 297 Query: 293 HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 HG + K G K+SKSL NVI P + ++ + ++Y+ +I G+DG + ++ LK+ VN Sbjct: 298 HGLLRDKDGLKMSKSLNNVIAPDYLFDKYHHEMIKYYFATQIIFGEDGNFSEEKLKEVVN 357 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-- 409 ADL N GNLVSR++ MI + P ++ + + I + ++ Q + Sbjct: 358 ADLINNYGNLVSRTLKMIHNSF----PKGLLYSVNSKKIHKDIEKEIKNFSAQFQKHMDA 413 Query: 410 --IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 I + + I L +++++Y D PW+L + +L + I ++ LQ +P Sbjct: 414 FEIDKGFKKAIELSAKLNKYIDETTPWKL-TDKLEELEPILVRLLNGIYAVSCALQIVLP 472 Query: 468 KLANKIFDILFV 479 ++ +L V Sbjct: 473 TKIKEVASVLKV 484 >gi|145605679|ref|XP_370452.2| hypothetical protein MGG_06949 [Magnaporthe oryzae 70-15] gi|145013476|gb|EDJ98117.1| hypothetical protein MGG_06949 [Magnaporthe oryzae 70-15] Length = 748 Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 158/440 (35%), Positives = 249/440 (56%), Gaps = 22/440 (5%) Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T K D NS F D+A+ I D FIRTT+ H + + W ++ D+G IY+ + G Sbjct: 1 MTPKQLCDANSEVFLDLAEKAGIDNDFFIRTTDPDHKEAVQYFWDRLWDRGYIYEATHKG 60 Query: 127 WYSLRDEAYYNDDEVYKGAD---GQYYNAQH---NPVQWMEEEGYFFRLSAYQDKLLSYY 180 WY + DE +Y + + K D G+ + A N V+WMEE+ Y FRL+A +D+LL ++ Sbjct: 61 WYCVSDETFYPESTIEKRKDPMTGEVFLASKETGNAVEWMEEKTYHFRLTALKDRLLKFF 120 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238 E +PE+I+P R EV+ +V++ L+DLS+SR T DWGI++P+D +YVWIDAL NY Sbjct: 121 EENPEWIVPAPRMKEVVDWVENSLEDLSVSRPTSRLDWGIRVPNDESQTIYVWIDALVNY 180 Query: 239 LTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 +T GY P+ + WPAD+H+IGKDI+RFH +YWPA L++ +LPLP+++ +H Sbjct: 181 VTKAGYPYWTPETVQKDGWPADIHIIGKDIVRFHCVYWPALLMALDLPLPRRILTHSHWT 240 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 G+K+SKSLGNV++P ++ GV+ +RYFL+ +D YD L L G Sbjct: 241 LGGKKMSKSLGNVVNPFLAMDRFGVEVIRYFLISNGRLLQDASYDNKILVDIYKRQLQGG 300 Query: 358 IGNL---VSRSVSMILKDYDGMIPTPGAFTESD-ESILSVCSRVLQEIRENMQNQLIH-- 411 +GNL V RS +++ G T S+ E S + L ++ + + Sbjct: 301 VGNLLGRVMRSKKWNVREIVERCSKEGRPTNSNVEPKYSSFEQRLFQLPGTVVDAFGELD 360 Query: 412 --RALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-----TVLYVTVEVIRQLAILLQA 464 AL + + +E +++ PW + N A+ + +Y+ E +R + ILLQ Sbjct: 361 PGAALRSIADMATETNKFITDCAPWSVTNENDADAAELNVRSCIYLCAESLRIMGILLQP 420 Query: 465 FVPKLANKIFDILFVADENR 484 FVP ++++ D+L V + +R Sbjct: 421 FVPNKSSELLDMLGVKETHR 440 >gi|323308936|gb|EGA62167.1| Msm1p [Saccharomyces cerevisiae FostersO] Length = 575 Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 173/522 (33%), Positives = 274/522 (52%), Gaps = 49/522 (9%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++T I YPNA+PH+GH Y +++DV R+ G FTTGTDEHG KI A+++ G Sbjct: 16 HVTTPIFYPNAKPHLGHLYSSLLSDVYHRWQLFKGNLSFFTTGTDEHGLKIQCASESNGF 75 Query: 68 -TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 K FVD+ F + + I+Y FIRTT+ H + LW+ G IY G + G Sbjct: 76 DQPKKFVDKLYPEFVQLDKIYGINYTRFIRTTDPDHVENVVKLWELCLKNGYIYMGEHKG 135 Query: 127 WYSLRDEAYYNDDEVYKGA--DGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 WYS+ DE +Y + +V K D +Y N + N V + E YFFRLS + K++ + + Sbjct: 136 WYSISDETFYPESKVIKDPKNDDKYLNTESKNEVVYQSETNYFFRLSLFNKKIVDHIRKN 195 Query: 184 PEFILPIERRNEVISFVKSG--LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239 P+FI P +R++++ +++G L DLS+SR + WGI P+DP +YVW DAL NYL Sbjct: 196 PDFIFPASKRDQILKELETGGTLPDLSISRPSARLKWGIPTPNDPSQKVYVWFDALCNYL 255 Query: 240 TTTGYL------------------DNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWP 276 ++ G + N G +P + +HVIGKDI +FH +YWP Sbjct: 256 SSIGGIPSILSNATEVVSRHHSDKSNVKGQLLIPYPKEVQRNTIHVIGKDIAKFHTVYWP 315 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 +FLL+ LPLP+++ HG L G K+SKSLGNV+DPI++ G D +R+FL+ Sbjct: 316 SFLLATGLPLPRQIVVHGHWLCNGMKMSKSLGNVVDPIDMARYYGADIVRWFLLENSKLE 375 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVS---------MILKD-----YDGMIPTPGA 382 +DG + + L + L + GNL++R M D + + Sbjct: 376 EDGDFQEAKLYE-TRELLVSKWGNLINRCCGSKFNIERAVMKFSDKANFQFQEIFQNEPT 434 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 +E E++ + ++ + E + + L V S++++ + KPWE + D Sbjct: 435 VSERIENLAKLLNKSQEVFDEKIAIFQYPQLLRHVWSIINDANTLVQNSKPWEREL---D 491 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + T++++ +E R L+IL Q+ +P L+ D + V+ E R Sbjct: 492 QQDTIIFLAMETSRILSILCQSIIPSLSQSFLDRIDVSKEKR 533 >gi|71894319|ref|YP_278427.1| methionyl-tRNA synthetase [Mycoplasma synoviae 53] gi|71851107|gb|AAZ43716.1| methionyl-tRNA synthetase [Mycoplasma synoviae 53] Length = 518 Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 153/448 (34%), Positives = 253/448 (56%), Gaps = 18/448 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I Y + HIGH Y +A V+ + +L G + F TG+DEHG KIA+ A+ Sbjct: 2 KKNFYITTPIYYASGNLHIGHLYTTTLAWVIRNYQKLLGNETKFLTGSDEHGSKIAQKAK 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 ++ FV+ + F+++ + DI+YD FIRTT + H T + ++ IYK Sbjct: 62 ENNLSEIEFVNSVAAKFKELWNSYDINYDIFIRTTSENHKKTAQKIFSYFYKNNYIYKNN 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+G YS+ E + + + Y+ H+ + + EE YFF++S + L Y+ + Sbjct: 122 YTGLYSVSAEEFLTKSQALEKNGKYYHPVSHDELIEVSEESYFFKMSEFSPWLKKYFAEN 181 Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 F+ P + NE++ +F+K+GL+DLS++R W I I +D + +YVW+DAL+NY++ Sbjct: 182 SNFLFPKKIENEILNNFIKNGLQDLSVTRTNVSWAIPIKEDLNHTLYVWVDALSNYISAL 241 Query: 243 GY---LDNPDGSK--AKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 GY LD S+ FW +H+IGK+I RFH IYWP FL + NL P + +H Sbjct: 242 GYNPELDYDSQSEDFKNFWENPNSKVVHLIGKEIARFHMIYWPIFLKALNLKQPTNIVAH 301 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+IL K+SKS GNV+DP E++ + + ++YFL +I G DG +D+ L +NA+ Sbjct: 302 GWILANDGKMSKSKGNVVDPNELLLKFDKEQIKYFLASQIPMGNDGVFDEKLLVDSINAN 361 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES-ILSVCSRVLQ---EIRENMQNQL 409 + N GNL+SRS+ M Y P ++++ E L + ++L+ + +++M L Sbjct: 362 IINSYGNLISRSLKM----YANSFSVPLKYSKNTEKDFLEIEEKILKSKVDFKKHMDLYL 417 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELK 437 + +A L S+++++ D + PW LK Sbjct: 418 VDKAFEVARELASDLNKFIDIKMPWTLK 445 >gi|148377472|ref|YP_001256348.1| methionyl-tRNA synthetase [Mycoplasma agalactiae PG2] gi|148291518|emb|CAL58904.1| Methionyl tRNA synthetase (Methionine tRNAligase) [Mycoplasma agalactiae PG2] Length = 515 Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 167/485 (34%), Positives = 275/485 (56%), Gaps = 20/485 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I Y + HIGH Y + ++A + ++ G DV F TG+DEHGQKI + A Sbjct: 2 KKTFYITTPIYYTSGPLHIGHLYCTTVTWIIANYKKILGFDVKFLTGSDEHGQKIEQKAA 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 A + + D+ +++ M +I+YD F RT++ +H + ++ K + G IYKG Sbjct: 62 AANKDPQTYADELVDSYKKMWQKYNINYDYFSRTSDPKHMKMVQAIFSKFLELGFIYKGK 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G YS+ DE + ++ DG+YY+ + + M EE YFF++ +Q+ L E+ Sbjct: 122 YDGLYSVNDEEFLTKNQAVL-KDGEYYHPVSGHKLVLMSEESYFFKMKEFQNWWLKEVEN 180 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +PE++LP + NE+I+ FV GL+DLS++R +WGIK +DP++ +YVW+DAL NY++ Sbjct: 181 NPEWLLPAKMTNEMITNFVSEGLEDLSVTRTNINWGIKTNEDPKHTLYVWLDALFNYVSA 240 Query: 242 TGY-LDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 G+ L+NP K+W +H+IGK+I RFH IYW F + + +P K+++HG + Sbjct: 241 LGFDLENPSDEYLKYWQNGDEIVHIIGKEISRFHFIYWTIFTKALGIRIPTKIYAHGLLR 300 Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 K G K+SKSL NVI+P + + + ++Y+ I+ G+DG + +D L +N++L N Sbjct: 301 DKNGRKMSKSLNNVIEPEYLFSKYDDEMIKYYFASAISFGEDGNFSEDKLIDIINSELVN 360 Query: 357 GIGNLVSRSVSMILKDY-DGMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHR 412 GNLVSR+V MI +G+I + E +E I S S+ + E M + + Sbjct: 361 NYGNLVSRTVKMISNSSPEGLIYRQSSKIEHLEIEEKINSFSSKFI----ELMDEFRLDK 416 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL ++L +++Y D KPW L + + +L + I ++ LQ +P N Sbjct: 417 ALEYSMNLSDALNKYIDMLKPWTLTAHEHKEELENILVRLLNGIYAVSWSLQIVMP---N 473 Query: 472 KIFDI 476 KI ++ Sbjct: 474 KITEV 478 >gi|305663645|ref|YP_003859933.1| methionyl-tRNA synthetase [Ignisphaera aggregans DSM 17230] gi|304378214|gb|ADM28053.1| methionyl-tRNA synthetase [Ignisphaera aggregans DSM 17230] Length = 501 Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 172/496 (34%), Positives = 261/496 (52%), Gaps = 26/496 (5%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +Y++T I YPN +PH+GHAY I+AD++AR+ L G + TGTDEHG K+ + Sbjct: 1 MNRNRYVYVTTPIYYPNDKPHLGHAYTTILADIIARWFYLQGYNTFLLTGTDEHGLKLQR 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G K FVD+ S FR DVL I Y+ FIRTT+K H + + + K+ +KG IY Sbjct: 61 EAEKRGKDPKTFVDEMSSIFRSYWDVLGIGYNRFIRTTDKDHEELVKYVLNKLLEKGYIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 +G YSGWY E +Y++ E + P++++EE+ YF R+S ++D +L Sbjct: 121 RGRYSGWYCSGCEKFYSEKEYIIENNTPICPIHKRPLEFIEEDTYFLRISEFRDYVLKIL 180 Query: 181 ESHPEFILPIERRNEVISFVK-SGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTN 237 + + + P + E+ S ++ GL+D+S++R WGI++P DP Y +YVWIDAL N Sbjct: 181 KEG-DVVYPKQYAIEIASKIELEGLQDISIARPKSRVYWGIELPFDPNYTLYVWIDALLN 239 Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 YLT GYL N + +W + +IGKDIL FH W + L +P P+K+ H ++ Sbjct: 240 YLTGIGYLKNIE-EFTNYWSGAIQLIGKDILWFHTAIWFSILAMLGIPPPRKLLVHAYLT 298 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG------LKKRVN 351 KG K+ KSLGNVI + I+ G + F++ IA YDKD N Sbjct: 299 VKGHKMGKSLGNVISIEDTIKRYGNPEVVRFIIARIAN-----YDKDTEVSWEIYDSIYN 353 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 DL N GNLV R + + +G + + DE + + + EN N I Sbjct: 354 NDLLNNYGNLVRRVAVLAKRYINGNVE-----RDLDEQFVRDIDELKNKAIENYNNLNIS 408 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 A+ + + + Y + ++PW K+ NP + +Y +E IR ++LLQ +P Sbjct: 409 EAIKYTLDIAHNTNSYLNRREPW--KEANPMKT---IYTALEAIRITSLLLQPVMPNTIK 463 Query: 472 KIFDILFVADENRCFQ 487 I ++L V E Q Sbjct: 464 TILNMLGVEIERNIKQ 479 >gi|291320134|ref|YP_003515392.1| methionyl tRNA synthetase [Mycoplasma agalactiae] gi|290752463|emb|CBH40435.1| Methionyl tRNA synthetase (Methionine tRNAligase) [Mycoplasma agalactiae] Length = 530 Score = 287 bits (734), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 168/485 (34%), Positives = 276/485 (56%), Gaps = 20/485 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I Y + HIGH Y +A + A + ++ G DV F TG+DEHGQKI + A Sbjct: 2 KKTFYITTPIYYTSGPLHIGHLYCTTVAWIFANYKKILGYDVKFLTGSDEHGQKIEQKAA 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 A + +VD+ +++ M +I+YD F RT++ +H + ++ K + G IYKG Sbjct: 62 AANKDPQTYVDELVDSYKKMWQRYNINYDYFSRTSDPKHMKMVQSIFTKFLELGFIYKGK 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G YS+ DE + ++ DG+YY+ + + M EE YFF++ +Q+ L E+ Sbjct: 122 YDGLYSVNDEEFLTKNQAVL-KDGEYYHPVSGHKLILMSEESYFFKMKEFQNWWLKEVEN 180 Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 +P+++LP + NE+I+ FV GL+DLS++R +WGIK +DP++ +YVW+DAL NY++ Sbjct: 181 NPQWLLPAKMTNEMITNFVSEGLEDLSVTRTNINWGIKTNEDPKHTLYVWLDALFNYVSA 240 Query: 242 TGY-LDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 + L+NP K+W +H+IGK+I RFH IYW F + + +P K+++HG + Sbjct: 241 LDFDLENPSDEYLKYWQNGDEIVHIIGKEISRFHFIYWTIFTKALGIKIPTKIYAHGLLR 300 Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 K G K+SKSL NVI+P + + + ++Y+ I+ G+DG + +D L VN++L N Sbjct: 301 DKDGRKMSKSLNNVIEPEYLFSKYDDEMIKYYFASAISFGEDGNFSEDKLIDIVNSELVN 360 Query: 357 GIGNLVSRSVSMILKDY-DGMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHR 412 GNLVSR+V MI + +G+I + E +E I S S+ + E M + + Sbjct: 361 NYGNLVSRTVKMISNSFPEGLIYRQSSKIEHLEIEEKINSFSSKFI----ELMDEFKLDK 416 Query: 413 ALAQVISLVSEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 AL ++L +++Y D KPW L + + +L + I ++ LQ +P N Sbjct: 417 ALEYSMNLSDALNKYIDILKPWTLTAHEHKEELENILVRLLNGIYAVSWSLQIVMP---N 473 Query: 472 KIFDI 476 KI ++ Sbjct: 474 KIAEV 478 >gi|225449565|ref|XP_002279143.1| PREDICTED: similar to AT3g55400/T22E16_60 [Vitis vinifera] Length = 555 Score = 286 bits (732), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 174/522 (33%), Positives = 260/522 (49%), Gaps = 75/522 (14%) Query: 3 ERE---KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 ERE ++T + Y NA PH+G AY I AD +ARF RL G V+F TGTDEHG+KIA Sbjct: 63 EREVSDSFVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLSGKKVIFITGTDEHGEKIA 122 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AA G + D S+ ++ + LDI+YD FIRTT +H + + ++ Sbjct: 123 TAAAACGSSPSEHCDVISQAYKTLWQDLDIAYDKFIRTTNPKHEAIVKEFYSRVL----- 177 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 A+G Y A + + + E Y Sbjct: 178 -------------------------ANGDIYRADYEGLYCINCEEY-------------- 198 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 +V S++KSGL+D S+SR + DWGI +P+D + +YVW DAL Y+ Sbjct: 199 ---------------KVQSWIKSGLRDFSISRASVDWGIPVPNDNKQTIYVWFDALLGYI 243 Query: 240 TTTGYLDN--PDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 + DN PD A WPA LH+IGKDILRFHA+YWPA LLSA L LPK VF HGF Sbjct: 244 SALSE-DNEQPDLQSAVSSGWPASLHLIGKDILRFHAVYWPAMLLSAGLSLPKMVFGHGF 302 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 + G K+ KSLGN ++P ++++ G DA+RYF +RE+ G DG Y +D VNA LA Sbjct: 303 LTKDGMKMGKSLGNTLEPNDLVQRFGSDAVRYFFLREVEFGNDGDYSEDRFINIVNAHLA 362 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N IGNL++R++ ++ K+ + + +++++ + +N + A Sbjct: 363 NTIGNLLNRTLGLLKKNCQSTLAVDSTLAAEGNAFKDTVDKLVEKAKFQYENLSLSSACE 422 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTV---LYVTVEVIRQLAILLQAFVPKLANK 472 V+ + + + Y D + PW L K + L + +E +R +AI L P+L+ + Sbjct: 423 AVLEIGNAGNLYIDERAPWSLFKQGAAASEAAAKDLVIILEAMRIIAIALSPVTPRLSLR 482 Query: 473 IFDILFVADENRCFQSLDQR----LKPGFMLHKTFDPIFPRF 510 I++ L E + + LK G ++ + P+F R Sbjct: 483 IYEQLGYTKEQFNATTWSETEWGGLKSGQVMAQP-KPVFARI 523 >gi|308190251|ref|YP_003923182.1| methionine--tRNA ligase methionyl-tRNA synthetase [Mycoplasma fermentans JER] gi|307624993|gb|ADN69298.1| methionine--tRNA ligase methionyl-tRNA synthetase [Mycoplasma fermentans JER] Length = 514 Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 171/492 (34%), Positives = 268/492 (54%), Gaps = 21/492 (4%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 MK+++ YI+T I Y + HIGH Y I+A V+ + + G D TG+DEHGQKI + Sbjct: 1 MKKQKTFYITTPIYYASGPLHIGHLYCTIMAWVIRNYKKALGYDAKLLTGSDEHGQKIQE 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A A K +VD +++++M +I YD F RTTE H + ++ KG IY Sbjct: 61 KALVAKKEPKQYVDDLVKSYKEMWAKWEIDYDYFSRTTESFHEQAVQKIFSYFLQKGLIY 120 Query: 121 KGCYSGWYSLRDEAYYN-DDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDKLL 177 KG Y G YS++DE + + VYK DG+YY+ ++H + MEEE YFF++ Q Sbjct: 121 KGSYQGLYSVQDEEFLTINQAVYK--DGKYYHPSSKHELIN-MEEESYFFKMKEVQKWWS 177 Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 Y + HP+F+LP + NE+ +FVK GL+DLS++R W I DDP++ +YVW DAL Sbjct: 178 EYNKKHPDFLLPKKVVNEMTNNFVKEGLEDLSVTRTNVKWAIPTIDDPKHTIYVWFDALF 237 Query: 237 NYLTTTGY-LDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 NY+T G+ + P K+W +H++GK+I RFH IYWP L + LP + S Sbjct: 238 NYITKLGFDFNKPKDDFVKYWKNGDEIVHILGKEIARFHFIYWPIVLNCLGIKLPNHIVS 297 Query: 293 HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 HG + K G K+SKSL NVI P + ++ + ++Y+ +I G+DG + ++ LK+ VN Sbjct: 298 HGLLRDKDGLKMSKSLNNVIAPDYLFDKYHHEMIKYYFATQIIFGEDGNFSEEKLKEVVN 357 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-- 409 ADL N GNLVSR++ MI + P ++ + + I + ++ Q + Sbjct: 358 ADLINNYGNLVSRTLKMIHNSF----PKGLFYSVNSKKIHKDIEKEIKNFSAQFQKHMDA 413 Query: 410 --IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 I + + I L +++++Y D PW+L + +L + I ++ LQ +P Sbjct: 414 FEIDKGFKKAIELSAKLNKYIDETTPWKL-TDKLEELEPILVRLLNGIYAVSCALQIVLP 472 Query: 468 KLANKIFDILFV 479 ++ +L V Sbjct: 473 TKIKEVASVLKV 484 >gi|224098226|ref|XP_002194925.1| PREDICTED: similar to rCG22562 [Taeniopygia guttata] Length = 706 Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 160/470 (34%), Positives = 247/470 (52%), Gaps = 30/470 (6%) Query: 46 LFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105 L +GTDEHG KI +AA AG ++ S FR ++Y DF RT+E RH Sbjct: 127 LSVSGTDEHGLKIQQAAAAAGTEPAELCERVSGLFRQALTQAGVAYTDFTRTSEPRHRRA 186 Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWM 160 W + D G +YKG Y GWY +E++ + ++ +G D Q + + V W Sbjct: 187 VGHFWGALRDGGVLYKGSYEGWYCTPEESFLPESQLAEGTDAQGRPCKVSLETGHEVHWT 246 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218 +EE Y FRLSA++D L ++ +P I P V+ ++ L DLS+SR+ WGI Sbjct: 247 KEENYMFRLSAFRDPLQNWLRDNPRAIFPDPFYQCVLRWLDEDLPDLSVSRERNRLQWGI 306 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 +P+DP +YVW+DAL NYL+ GY + S + +WPA HV+GKDIL+FHA+YWPA Sbjct: 307 PVPNDPTQTIYVWVDALVNYLSVVGYPE----SHSAWWPAVHHVVGKDILKFHALYWPAL 362 Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 LL+A L P+++ H +G+K+SKSLGNV+DP + + GVD RYFL+R+ +D Sbjct: 363 LLAAGLEPPERILVHSHWTVRGQKMSKSLGNVVDPSVCVGQYGVDGFRYFLLRQGVPERD 422 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-------YDGMIPT---------PGA 382 Y + + K VN++LA+ +G L++RS + + + P G Sbjct: 423 CDYYDEKVMKLVNSELADALGGLLNRSTASSINPSNTYPRFSEPCFPKVLDSREARGTGR 482 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 D +++ + + ++ + I++AL + V + + +F KPW+L + + Sbjct: 483 ACVEDYKLVAAVASLPAQVDSYFEGFQIYKALECIAQCVRQTNGFFQRHKPWKLDRRDAA 542 Query: 443 RA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489 T+L+VT+E +R LLQ VP A+K+ L V R L Sbjct: 543 EQLWLDTILHVTLECLRVYGTLLQPVVPHTADKLLSRLAVGPGERDLSGL 592 >gi|170103074|ref|XP_001882752.1| predicted protein [Laccaria bicolor S238N-H82] gi|164642123|gb|EDR06380.1| predicted protein [Laccaria bicolor S238N-H82] Length = 588 Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 181/542 (33%), Positives = 270/542 (49%), Gaps = 66/542 (12%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKA 61 ++ Y++T I YPNA PHIGH Y +++ D+ AR+ R+ V F GTDEHG KI +A Sbjct: 38 KKPYYLTTPIFYPNAVPHIGHLYTLVLGDIFARYQRILDPTRPVHFLAGTDEHGLKIQQA 97 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ AGV K F D S FR++AD ISY ++RTT+++H +W + KG IYK Sbjct: 98 AEKAGVEPKSFCDSLSGKFRELADRARISYTVYMRTTQEQHKKAVEHVWLTLDRKGFIYK 157 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----------HNPVQWMEEEGYFFRLS 170 G Y GWYS+ DE +Y D +V +++ +PV+W E+ Y FRLS Sbjct: 158 GQYEGWYSITDECFYADAQVMPATLPSSSSSRGEKPAMISIETSSPVEWTTEQNYMFRLS 217 Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------------LKDLSLS--RKTF 214 A+++ L +Y + P + V+ + S L+D+S+S R Sbjct: 218 AFREALEEHYREQKTEVHPPPYHSAVLKMLGSASSSTSSSADAPEPILQDISISRPRSRL 277 Query: 215 DWGIKIPDDP-QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273 WG+ +P DP + MYVW DAL YL+ GY + G WPADL +IGKDILRFHA+ Sbjct: 278 SWGVPVPTDPLNHTMYVWFDALLVYLSGVGYPWSHLGPSIP-WPADLQIIGKDILRFHAL 336 Query: 274 YWPAFLLS---------------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 Y PA L++ LPL K+ SH +K+SKSLGNV DP+ + Sbjct: 337 YLPAILMALSSPSPPSSSPSPPPQKLPLSSKILSHAHWTVSRQKMSKSLGNVADPLAAMS 396 Query: 319 EVGVDALRYFLVREIACGK---DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 GVD +RY+L I G+ D + + L K + +L + +GN R S + Sbjct: 397 TYGVDIVRYYLA--IVGGRFRDDVDWSPEQLTKH-SKELQSLLGNYFLRVTS----ERIS 449 Query: 376 MIPTPGAFTESDESI--------LSVCSRVL-QEIRENMQNQLIHRALAQVISLVSEVDR 426 + P + + E+I L + +R L ++++ + N + AL ++I+L+ ++ Sbjct: 450 AVAQPATESNASETIEEPNPNRSLLLSARALPTQVQKALDNLEVGEALEEIIALLRLANK 509 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 PW P V +E +R I LQ F+P +A K+ D L V R + Sbjct: 510 TVTTIAPWS-ASCPPTNVYVTQLVALETLRITGICLQPFIPDVAEKLLDGLGVPAGERDW 568 Query: 487 QS 488 S Sbjct: 569 AS 570 >gi|12044871|ref|NP_072681.1| methionyl-tRNA synthetase [Mycoplasma genitalium G37] gi|255660383|ref|ZP_05405792.1| methionyl-tRNA synthetase [Mycoplasma genitalium G37] gi|1351165|sp|P47267|SYM_MYCGE RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|3844630|gb|AAC71237.1| methionyl-tRNA synthetase [Mycoplasma genitalium G37] gi|166079081|gb|ABY79699.1| methionyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0] Length = 512 Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 171/515 (33%), Positives = 274/515 (53%), Gaps = 16/515 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ YI+T I Y + +PHIGHA+ I+ADV+ RF +G + G+DEHG KI A++ Sbjct: 2 KRCYITTPIYYASGKPHIGHAFTTILADVIKRFKIQNGYEAFLLVGSDEHGNKIESKAKS 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + K FVD N++ F+ M L+IS+D FIRTT++ H + ++ + DK IY+ + Sbjct: 62 LNLDPKTFVDINAQAFKLMWKTLNISFDHFIRTTDEIHKQQVQKTFQDLYDKKLIYQSEW 121 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + E Y HN + ++E +F S+ ++ + + + Sbjct: 122 KGAYCVECEQNY----FTFNKQTMLCEIGHN-LSLVQEPCWFISFSSTKNWIETTIGKNQ 176 Query: 185 EFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 I+P R +E+ +F+ +GL DL+L+RK WGIK+P DP +YVW DAL +Y+T G Sbjct: 177 LNIIPKSRASELKNNFINNGLNDLALTRKNVTWGIKVPFDPNQTIYVWFDALFSYITNLG 236 Query: 244 YLDNPDGSKAKFWPAD------LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 + N D + K+W D +H+I ++I RFH IYWP FL ++ LP + SHG+I+ Sbjct: 237 F-RNGDPNFIKWWNNDNKEREVIHLISREITRFHCIYWPIFLHLLDIKLPTQFLSHGWIV 295 Query: 298 H-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 +G K+SKSL NVI P ++I++ GVD RY L++E+ KD LK+ NADLAN Sbjct: 296 DGEGRKMSKSLNNVISPEQLIDQFGVDGTRYCLLKEMRLDKDNRCSVSILKEIYNADLAN 355 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 GN VSR+ MI K +G + + + I+ + + + + +RA+ Sbjct: 356 SFGNHVSRTFGMIKKYLNGKLEYQIITDNALQKIMILIDESIVQFDHYFNSYEFYRAINL 415 Query: 417 VISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 ++ +V E+ + D KPWEL K +L+ V ++ +LL + A+K+F Sbjct: 416 LLKIVFELSKLIDDFKPWELFKNQEFSLLKQLLFTCVRCVQVCYVLLTPILVNTASKVFH 475 Query: 476 IL-FVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 + F D R Q D L ++ + + +F R Sbjct: 476 LFNFADDACRKDQLRDATLLKKIIISNSMEVLFKR 510 >gi|67526815|ref|XP_661469.1| hypothetical protein AN3865.2 [Aspergillus nidulans FGSC A4] gi|40739940|gb|EAA59130.1| hypothetical protein AN3865.2 [Aspergillus nidulans FGSC A4] Length = 528 Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 167/494 (33%), Positives = 246/494 (49%), Gaps = 68/494 (13%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQNAG 66 Y++T I Y NA PH+GH Y M++AD+L R+ L G + TGTDEHG K G Sbjct: 56 YVTTPIFYVNAAPHVGHLYTMVLADILKRWRTLTGDNEAQLLTGTDEHGMK--------G 107 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + ++ ++Y + E H +G IY + G Sbjct: 108 LLGEI-----------------VTYAE----QEMLQH------------RGYIYTSKHEG 134 Query: 127 WYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 WYS+ DE +Y +V G V+W E Y FRLSA+QD+LL Y Sbjct: 135 WYSVSDETFYPQSQVNLSLDPATGRKRMVSTETGKEVEWSSETNYHFRLSAFQDRLLELY 194 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238 ++ +FI P +V+ V SGL DLS+SR + WGI +P+D +YVW+DAL NY Sbjct: 195 KT--DFITPTHYTEQVVKSVASGLSDLSISRPVERLTWGIPVPNDNTQTIYVWLDALVNY 252 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 LT GY P WPAD+HV+GKDI+RFH +YWPAFL++ +LPLP+ V H Sbjct: 253 LTKAGYPFPPGEGSRLGWPADVHVVGKDIVRFHCVYWPAFLMALDLPLPRNVLVHAHWTM 312 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 EK+SKS GNV++P I+ G+D +R+FL D YD + + L G+ Sbjct: 313 NREKMSKSTGNVVNPFFAIDRFGMDTMRFFLAHRGGLASDSDYDNRYIIRDYKKYLQQGL 372 Query: 359 GNLVSRSVSMI---LKDY-----DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410 GN+ R++ L+DY G P T D++ ++ ++ + M+ Sbjct: 373 GNIAHRTIGCAKGKLRDYIINATSGNSPA----TADDQAYQKTLEQLSHKVAKCMEALDP 428 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL +++ ++ ++YF +PW+ NP+ V++ E +R + ILLQ F+P A Sbjct: 429 RAALEEIVEVILLTNKYFHNSEPWQ----NPEEKQRVIFNAAESMRIMGILLQPFMPNKA 484 Query: 471 NKIFDILFVADENR 484 K+ DIL V R Sbjct: 485 KKLLDILKVDPSKR 498 >gi|320167707|gb|EFW44606.1| methionyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864] Length = 583 Score = 280 bits (715), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 177/528 (33%), Positives = 260/528 (49%), Gaps = 82/528 (15%) Query: 42 GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101 G +F+TGTDEHG KI +AA G+T D+ S FR++ D+ DI Y DF+RTTE+R Sbjct: 3 GHQTVFSTGTDEHGMKIQQAAAAEGLTPLELCDRTSTRFRELFDLCDIGYTDFVRTTEER 62 Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN 155 H R +W K++ + IY G Y+GWYS+ DE + + + G A + + Sbjct: 63 HKAVARAVWTKLASEQLIYLGNYAGWYSVPDETFVPEAQTVAGVRKRDGAPCKLSLESGH 122 Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-----KSGLKDLSLS 210 ++W+E+ Y F+L +++KLL + +S P + P R + V S DLS+S Sbjct: 123 ELEWVEQPNYKFKLPLFKEKLLQWLDSQPATVAPQNRLAWTVQEVGQMKATSDADDLSVS 182 Query: 211 RKT--FDWGIKIPDDPQYIMYVWIDALTNYLT--------------TTGYLDNP--DGSK 252 R T WGI P+DP ++MYVW+DALTNYLT T + P DG Sbjct: 183 RLTQYLQWGIPTPNDPSHVMYVWLDALTNYLTVSQVPVHKLSEVKKTGAKPEFPALDGQV 242 Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312 WPAD H+IGKDIL+FHAIYWPAFLL A L PK+V +HG G+K+SKS GN +D Sbjct: 243 FSAWPADYHIIGKDILKFHAIYWPAFLLGAGLAPPKRVIAHGHWTVNGQKMSKSKGNGVD 302 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-- 370 P + + GVDA+RYFL R+ D Y + N +LA GNL+SR + L Sbjct: 303 PFDRVAVHGVDAVRYFLFRDSQLDSDCDYSDTRVTDLFNGELAAAFGNLLSRVFARALLQ 362 Query: 371 ----------------KDYDGM-----IPTP---GAFTESDESILSVCSRVLQEIRENMQ 406 + D + +P+ A+T SD + V + QE+ + + Sbjct: 363 PANQPSATLSSSPSSAQTADDLAAWAFVPSKLDGTAWTRSDA--IQVLPPIAQELHDKLN 420 Query: 407 N--QLIH---------RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA----------- 444 L+H R + V+ + +R F +PW L KT + A Sbjct: 421 QLPSLVHEAYTDAQFARGITAVLFSIQCCNRAFTIVEPWTLAKTIREGALKNEPVNETAL 480 Query: 445 ---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489 +LY+T+E +R ++ L +P+ + L + + R Q + Sbjct: 481 TQLRAMLYLTLETLRIASLCLLPVLPRSMTAALNHLSIPADQRLAQHI 528 >gi|269796329|ref|YP_003315784.1| methionyl-tRNA synthetase [Sanguibacter keddieii DSM 10542] gi|269098514|gb|ACZ22950.1| methionyl-tRNA synthetase [Sanguibacter keddieii DSM 10542] Length = 536 Score = 280 bits (715), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 172/522 (32%), Positives = 254/522 (48%), Gaps = 60/522 (11%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + LYI+T+I Y N +PH+GHA E++ DVLAR RL G V +GTD+H K AA Sbjct: 2 DDLYITTSIPYVNGRPHLGHALELVHVDVLARHRRLRGAQVRVQSGTDDHALKNVSAASL 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKGC 123 AGV V N F ++ D L + D+F+RT ++ RH LW+ GD+Y+ Sbjct: 62 AGVPVADLVAANGDRFVELVDALGVRTDEFVRTSSDPRHAPGVVALWEACRAAGDLYQKD 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y+G Y E +Y DE+ G G++ PVQ + E +FFRLS Y+D++ + S Sbjct: 122 YTGLYCPGCEQFYAADELVDGLCGEH----GTPVQEVTETNWFFRLSRYRDQVAALVASG 177 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 + P +RRNEV+ F+ + D+S+SR + WG+ +P DP ++YVW DAL NYLT Sbjct: 178 EVAVEPRQRRNEVLGFLAGEVHDISVSRPADRAGGWGVPVPGDPGQVVYVWFDALVNYLT 237 Query: 241 TTGY-------------LDNPDGSK--------------------------AKFWPAD-- 259 GY D G + A++W Sbjct: 238 GLGYGSETGRGAAVGREADAVRGGRESVGAAGEAVEVSVAVDVGVGVEEPFARWWGGGAE 297 Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 HV+GK I RFHA+YW AFLLSA LPLP +V H ++ G KI+KS DP V+ Sbjct: 298 RTHVLGKGIARFHAVYWVAFLLSAGLPLPTRVLVHDYLTVDGAKIAKSGSQAADPATVVA 357 Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 G DALR++L R+ A + + L + DLANG+GNLVSR++++ +D P Sbjct: 358 TYGPDALRWWLARDPAPVGTTDFTVERLVGCYDRDLANGLGNLVSRTLTLARRDRSWSAP 417 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 E + + + + + + A + LV +R+ + + PW L + Sbjct: 418 P---TAEVGVEVRAAARALPDAVDAALARYDLRSACEAITGLVEHGNRFIEGEAPWRLAR 474 Query: 439 T-------NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 R V+ VE+ R L+ FVP+ A ++ Sbjct: 475 AADAGDLEAAARFEGVVDALVELCRVATHELEPFVPEGAARL 516 >gi|149238235|ref|XP_001524994.1| methionyl-tRNA synthetase, mitochondrial [Lodderomyces elongisporus NRRL YB-4239] gi|146451591|gb|EDK45847.1| methionyl-tRNA synthetase, mitochondrial [Lodderomyces elongisporus NRRL YB-4239] Length = 608 Score = 280 bits (715), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 187/565 (33%), Positives = 283/565 (50%), Gaps = 83/565 (14%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFT-TGTDEHGQKIAKAAQNA 65 LY++T I Y NA PHIGH Y M+IAD ++ +LD + TGTDEHG KI AA Sbjct: 21 LYVTTPIFYVNAAPHIGHLYSMLIADTRCKWEKLDPKKSSYMLTGTDEHGLKIQVAAAKQ 80 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ K VD+ S NF+D+ D++YD FIRTT+ H + WK + +KG IYKG +S Sbjct: 81 GIDPKQLVDKVSGNFKDLCANSDVTYDRFIRTTDDDHVKVTKYFWKLMEEKGYIYKGSHS 140 Query: 126 GWYSLRDEAYYND---DEVYK-GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 GWY + DE +Y + +EV + G + N V + EE YFF+LSA+QD+L+ + + Sbjct: 141 GWYCVSDETFYPETAIEEVERDGKIIKISTETKNEVVFEEETNYFFKLSAFQDQLIQFLK 200 Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238 +P +I P R + +++ + S L+DLS+SR W I +P+D +YVW DAL NY Sbjct: 201 ENPNWIKPKHRYDFIMNELLNSPLEDLSISRPASRLSWSIAVPNDESQKIYVWFDALLNY 260 Query: 239 LTTTGYLD--NPDG----------------------------SKAKF-------WPADLH 261 LT TG+ DG S F WPA H Sbjct: 261 LTATGFPKQFQSDGVTKVGTSNNNGGSNNNENNENNENNENISSQSFQTPPLNIWPA-TH 319 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321 +IGKDI+RFH IYWP FL++A + LPK+V H L G K+SKSLGNVI P ++++ G Sbjct: 320 IIGKDIIRFHCIYWPIFLIAAGIELPKEVIVHSHWLSDGVKMSKSLGNVIKPKDILDYYG 379 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-- 379 +D +R+F + D Y D L + L N NL++R +S D G + Sbjct: 380 IDPVRFFFMENSNISDDCKYS-DELIHQSRGLLINKYCNLINR-ISSTRFDIRGGVEMYH 437 Query: 380 PGAFTESDE---------------SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 G F + +E S++S +++ + + ++ +RA+ S +++ Sbjct: 438 QGKFEDINEFVKQEAGNEVAAEIQSLISNLNQLYSVMNDEIKEYRYNRAIQAWWSAINQA 497 Query: 425 DRYFDAQKPW-------------ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 ++ F PW E +++ + ++ E +R +IL+Q + +L+ Sbjct: 498 NQIFQLSHPWSYVSAIADEQTPQETRESYQKLINYYTFICSECVRIASILIQPVMHELSG 557 Query: 472 KIFDILFVADENR-----CFQSLDQ 491 I D + V R CF + DQ Sbjct: 558 IILDRMNVDKTKRTSEFACFGADDQ 582 >gi|71893760|ref|YP_279206.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae J] gi|71851887|gb|AAZ44495.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae J] Length = 513 Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 163/515 (31%), Positives = 280/515 (54%), Gaps = 16/515 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I Y + + HIGH Y ++A V+ F ++ G + TG+DEHGQKI++ A Sbjct: 3 KKCYITTPIYYASGRLHIGHLYTTVLAWVIRNFKKMSGFEARLFTGSDEHGQKISQLAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 A + + FVD+N NF+ + + +I YD F RTT H + + ++ K+ + I+ G Y Sbjct: 63 ANLEPQEFVDKNVENFKFLWEKFEIDYDYFQRTTNLNHKNFIKKIFLKMYEDNHIFNGEY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G YS+ DE + + + ++ ++ + E+ YFF + +Q L + +P Sbjct: 123 QGLYSISDEEFLSQSQAVYQNGSYFHPVSGAKMELISEKSYFFPIKKFQKWLEDFLLENP 182 Query: 185 EFILPIERRNEV-ISFVKSGLKDLSLSRKTFDWGIKIPDD-PQYIMYVWIDALTNYLTT- 241 +FI + NE+ +F++ GL+DLS++RK WGI + +YVW+DAL +YL+ Sbjct: 183 KFIFDSKIANELRQNFLQKGLEDLSVTRKNLKWGIFLDQKFENQTIYVWLDALFSYLSVF 242 Query: 242 TGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 +D + K+ FW + V+GK+I RFH IYWP FL S N PLP + +HG+++ Sbjct: 243 KDQIDLENPKKSNFWTDSAQIIQVVGKEIARFHCIYWPIFLKSLNFPLPSIILTHGWLIT 302 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K+SKS GNVI+P++++++ + ++++ V +I D +D++ L+ N+ N Sbjct: 303 PEGKMSKSKGNVINPLDLLKKFDPEIIKFYFVSQINTKNDSVFDENLLENFYNSFFVNTF 362 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--QL-IHRALA 415 GNL+SR++++I+K +D P + D + +S ++L + E N QL I +A Sbjct: 363 GNLISRTIALIVKKFDQ--PLLFEIADLDWTDISFYEKILLSLDEFCDNFDQLEIEKAFK 420 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 VI L ++ +FD ++ W K N + + L + + I + + L +PK N+I + Sbjct: 421 TVIELTKNLNGFFDIKQLWNQK--NLKKLAQGLILVLNGIYAITVFLSIAMPKKTNEILE 478 Query: 476 ILFVADENRCF-QSLDQRLKPGFMLHKTFDPIFPR 509 L + ++N LD+ K F K P FPR Sbjct: 479 FLGINEKNFLLITKLDKFDKINF--KKLEKPFFPR 511 >gi|23012796|ref|ZP_00052797.1| COG0143: Methionyl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 297 Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 132/294 (44%), Positives = 192/294 (65%), Gaps = 4/294 (1%) Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279 +P D +IMYVW+DALTNY+T GY D G A++WP +H++GKDI+RFHA+YWPAFL Sbjct: 1 MPGDDAHIMYVWLDALTNYITAVGYPDT-TGDFARYWPNVIHMVGKDIVRFHAVYWPAFL 59 Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 ++A+LP P++VF+HG+ ++G+KISKS+GNVIDP+ +IE G+D +RYFL+RE+ G DG Sbjct: 60 MAADLPAPRRVFAHGWWTNEGQKISKSVGNVIDPLSLIETYGLDQVRYFLLREVPFGNDG 119 Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399 + + R+N++LAN GNLV RS+SMI K+ G+ P T+ D+ +L +L Sbjct: 120 DFSHRAMMGRMNSELANDYGNLVQRSLSMIGKNCSGVTPAHSPDTDDDKEMLGAAYAMLA 179 Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459 ++R++M Q+ H A+ + ++ + Y D Q PW LKKT+P R TVL+V E IR L Sbjct: 180 KVRDSMDRQMYHEAIEAIWVVIRAANGYVDKQAPWALKKTDPARMGTVLWVLAETIRCLG 239 Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLKPGFMLHKTFDPIFPRFL 511 +L Q F+P + +I D L V + R F LK G L T +FPR++ Sbjct: 240 LLTQPFMPAASARILDQLMVPEAERSFAFFGPAHALKAGITL-PTPQGVFPRYV 292 >gi|54020190|ref|YP_115920.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 232] gi|53987363|gb|AAV27564.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 232] Length = 520 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 163/518 (31%), Positives = 280/518 (54%), Gaps = 16/518 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K +K YI+T I Y + + HIGH Y ++A V+ F ++ G + TG+DEHGQKI++ Sbjct: 7 KMTKKCYITTPIYYASGRLHIGHLYTTVLAWVIRNFKKMSGFEARLFTGSDEHGQKISQL 66 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A A + + FVD+N NF+ + + +I YD F RTT H + + ++ K+ + I+ Sbjct: 67 AAKANLEPQEFVDKNVENFKFLWEKFEIDYDYFQRTTNLNHKNFIKKIFLKMYEDNHIFN 126 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 G Y G YS+ DE + + + ++ ++ + E+ YFF + +Q L + Sbjct: 127 GEYQGLYSISDEEFLSQSQAVYQNRNYFHPVSGAKMELISEKSYFFPIKKFQKWLEDFLL 186 Query: 182 SHPEFILPIERRNEV-ISFVKSGLKDLSLSRKTFDWGIKIPDD-PQYIMYVWIDALTNYL 239 +P+FI + NE+ +F++ GL+DLS++RK WGI + +YVW+DAL +YL Sbjct: 187 ENPKFIFDSKIANELRQNFLQKGLEDLSVTRKNLKWGIFLDQKFENQTIYVWLDALFSYL 246 Query: 240 TT-TGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 + +D + K+ FW + V+GK+I RFH IYWP FL S N LP + +HG+ Sbjct: 247 SVFKDQIDLENPKKSNFWTDSAQIIQVVGKEIARFHCIYWPIFLKSLNFRLPSIILTHGW 306 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 ++ K+SKS GNVI+P++++++ + ++++ V +I D +D++ L+ N+ Sbjct: 307 LITPEGKMSKSKGNVINPLDLLKKFDPEIIKFYFVSQINTKNDSVFDENLLENFYNSFFV 366 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--QL-IHR 412 N GNL+SR++++I+K +D P + D + +S ++L + E N QL I + Sbjct: 367 NTFGNLISRTIALIVKKFDQ--PLLFEIADLDWTDISFYEKILLSLDEFCDNFDQLEIEK 424 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 A VI L ++ +FD ++ W K N + + L + + I + + L +PK N+ Sbjct: 425 AFKTVIELTKNLNGFFDIKQLWNQK--NLKKLAQGLILVLNGIYAITVFLSIAMPKKTNE 482 Query: 473 IFDILFVADENRCF-QSLDQRLKPGFMLHKTFDPIFPR 509 I + L + ++N LD+ K F K P FPR Sbjct: 483 ILEFLGINEKNFLLITKLDKFDKINF--KKLEKPFFPR 518 >gi|312601349|gb|ADQ90604.1| Methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 168] Length = 513 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 166/517 (32%), Positives = 284/517 (54%), Gaps = 20/517 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I Y + + HIGH Y ++A V+ F ++ G + TG+DEHGQKI++ A Sbjct: 3 KKCYITTPIYYASGRLHIGHLYTTVLAWVIRNFKKMSGFEARLFTGSDEHGQKISQLAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 A + + FVD+N NF+ + + +I YD F RTT H + + ++ K+ + I+ G Y Sbjct: 63 ANLEPQEFVDKNVENFKFLWEKFEIDYDYFQRTTNLNHKNFIKKIFLKMYEDNHIFNGEY 122 Query: 125 SGWYSLRDEAYYNDDE-VYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 G YS+ DE + + + VY+ +G Y++ ++ + E+ YFF + +Q L + Sbjct: 123 QGLYSISDEEFLSQSQAVYQ--NGNYFHPVSGAKMELISEKSYFFPIKKFQKWLEDFLLE 180 Query: 183 HPEFILPIERRNEV-ISFVKSGLKDLSLSRKTFDWGIKIPDD-PQYIMYVWIDALTNYLT 240 +P+FI + NE+ +F++ GL+DLS++RK WGI + +YVW+DAL +YL+ Sbjct: 181 NPKFIFDSKIANELRQNFLQKGLEDLSVTRKNLKWGIFLDQKFENQTIYVWLDALFSYLS 240 Query: 241 T-TGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 +D + K+ FW + V+GK+I RFH IYWP FL S N LP + +HG++ Sbjct: 241 VFKDQIDLENPKKSNFWTDSAQIIQVVGKEIARFHCIYWPIFLKSLNFRLPSIILTHGWL 300 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 + K+SKS GNVI+P++++++ + ++++ V +I D +D++ L+ N+ N Sbjct: 301 ITPEGKMSKSKGNVINPLDLLKKFDPEIIKFYFVSQINTKNDSVFDENLLENFYNSFFVN 360 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--QL-IHRA 413 GNL+SR++++I+K +D P + D + +S ++L + E N QL I +A Sbjct: 361 TFGNLISRTIALIVKKFDQ--PLLFEIADLDWTDISFYEKILLSLDEFCDNFDQLEIEKA 418 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 VI L ++ +FD ++ W K N + + L + + I + + L +PK N+I Sbjct: 419 FKTVIELTKNLNGFFDIKQLWNQK--NLKKLAQGLILVLNGIYAITVFLSIAMPKKTNEI 476 Query: 474 FDILFVADENRCF-QSLDQRLKPGFMLHKTFDPIFPR 509 + L + +N LD+ K F K P FPR Sbjct: 477 LEFLGIRQKNFLLITKLDKFDKINF--KKLEKPFFPR 511 >gi|72080730|ref|YP_287788.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448] gi|71913854|gb|AAZ53765.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448] Length = 513 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 162/515 (31%), Positives = 278/515 (53%), Gaps = 16/515 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K YI+T I Y + + HIGH Y ++A V+ F ++ G + TG+DEHGQKI++ A Sbjct: 3 KKCYITTPIYYASGRLHIGHLYTTVLAWVIRNFKKMSGFEARLFTGSDEHGQKISQLAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 A + + FVD+N NF+ + + +I YD F RTT H + + ++ K+ + I+ G Y Sbjct: 63 ANLEPQEFVDKNVENFKFLWEKFEIDYDYFQRTTNLNHKNFIKKIFLKMYEDNHIFNGEY 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G YS+ DE + + + ++ ++ + E+ YFF + +Q L + +P Sbjct: 123 QGLYSISDEEFLSQSQAVYQNGSYFHPVSGAKMELISEKSYFFPIKKFQKWLEDFLLENP 182 Query: 185 EFILPIERRNEV-ISFVKSGLKDLSLSRKTFDWGIKIPDD-PQYIMYVWIDALTNYLTT- 241 +FI + NE+ +F++ GL+DLS++RK WGI + +YVW+DAL +YL+ Sbjct: 183 KFIFDSKIANELRQNFLQRGLEDLSVTRKNLKWGIFLDQKFENQTIYVWLDALFSYLSVF 242 Query: 242 TGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 +D + K+ FW + V+GK+I RFH IYWP FL S N LP + +HG+++ Sbjct: 243 KDQIDLENPKKSNFWTDSAQIIQVVGKEIARFHCIYWPIFLKSLNFRLPSIILTHGWLIT 302 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K+SKS GNVI+P++++++ + ++++ V +I D +D++ L+ N+ N Sbjct: 303 PEGKMSKSKGNVINPLDLLKKFDPEIIKFYFVSQINTKNDSVFDENLLENFYNSFFVNTF 362 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--QL-IHRALA 415 GNL+SR++++I+K +D P + D + +S ++L + E N QL I +A Sbjct: 363 GNLISRTIALIVKKFDQ--PLLFEIADLDWTDISFYEKILLSLDEFCDNFDQLEIEKAFK 420 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 VI L ++ +FD ++ W K N + + L + + I + + L +PK N+I + Sbjct: 421 TVIELTKNLNGFFDIKQLWNQK--NLKKLAQGLILVLNGIYAITVFLSIAMPKKTNEILE 478 Query: 476 ILFVADENRCF-QSLDQRLKPGFMLHKTFDPIFPR 509 L + +N LD+ K F K P FPR Sbjct: 479 FLGIRQKNFLLITKLDKFDKINF--KKLEKPFFPR 511 >gi|290992262|ref|XP_002678753.1| methionyl-tRNA synthetase [Naegleria gruberi] gi|284092367|gb|EFC46009.1| methionyl-tRNA synthetase [Naegleria gruberi] Length = 636 Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 166/511 (32%), Positives = 266/511 (52%), Gaps = 53/511 (10%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAA---- 62 I+T I Y N PHIGH + I++D + +H+ + D++F+TGTDEHG K+ + A Sbjct: 71 ITTPIYYVNGPPHIGHLFTTILSDSIYLYHKQLKNRHDMIFSTGTDEHGSKVQRTAIKNL 130 Query: 63 --QNA------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH-DTCRILWKKI 113 QN + F ++ S F+ M +I Y ++RT+ R H +T +WK++ Sbjct: 131 PNQNTLDDETINKSCVEFCEKISETFKTMMKDFNIQYTHYLRTSATREHRETVERVWKEL 190 Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ-------YYNAQHNPVQWMEEEGYF 166 +GDIY G Y GWY DEA+ D E K + + A N +++ E+ Y Sbjct: 191 EKRGDIYLGEYQGWYCTTDEAFTTDIEQVKITNEKGEEELVTLSKASGNRCEFVTEKNYK 250 Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK------DLSLSRKT--FDWGI 218 FRLS Y D++ + E +P + P ER NE++ +K + DLS+SR WGI Sbjct: 251 FRLSKYMDRIQQWLEENPNTVKPKERYNELMELIKKEKERSPESLDLSISRTRDRVQWGI 310 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 +PDD ++ +YVW+DALTNYLT L N ++ WP + +IGKDIL+FH IYWPAF Sbjct: 311 PVPDDSEHTIYVWLDALTNYLTAGSTLAN----ESLNWPPTVQIIGKDILKFHGIYWPAF 366 Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIACG 336 L++ LP+ + H + L K+SKSLGNV+ P +++ + GV D LRY+L+ E Sbjct: 367 LMALGKELPETILVHSYWLVNDVKMSKSLGNVVSPYDLLNQTGVEHDLLRYYLLSEAVLS 426 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-------TPGAFTESDES 389 D + +VN +LA+ GNL++R+ + +G I P A +++ Sbjct: 427 NDSSFSMVRFPVKVN-ELADIFGNLLTRAFNKKFHAEEGEIQYRNLQFDCPNAEQNPNQT 485 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-----EVDRYFDAQKPWELKK---TNP 441 + +L +++E ++N R + +L + + ++ FD KPW L K N Sbjct: 486 AQELI-ELLNDLQEQVRNAYEERCEVRFANLAATKILKKCNQLFDEVKPWILVKDAVANA 544 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + ++++ E +R +I L +P N+ Sbjct: 545 QQIEELMFLVAETLRNCSIALYPVLPHKMNQ 575 >gi|166157037|emb|CAO79494.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) [uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11] Length = 471 Score = 273 bits (697), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 168/481 (34%), Positives = 268/481 (55%), Gaps = 33/481 (6%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKA 61 ++K+ I+TAI Y N HIGHAY+ I+AD +ARF R+ +V F TGTDEHGQK+ Sbjct: 2 KKKILITTAIDYVNDVIHIGHAYQKILADCVARFERIRRGSENVFFVTGTDEHGQKVYNV 61 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ GV K FVD+ S+ ++ D + ISYD FIRTT+ H T ++K+ + G IYK Sbjct: 62 AKERGVDVKEFVDEISKKDQEQQDSIQISYDRFIRTTDGDHKKTAEDFFRKVYNAGYIYK 121 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y G Y E+Y + ++ G + + +Q +EEE YFF+ S+++D L + YE Sbjct: 122 DNYKGLYCEGCESYKTEKDLINGRCALHPGLE---IQVVEEENYFFKFSSFKDFLRTLYE 178 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239 +P+F+LP R E+ +F+ + ++D+ ++R+ WGI+ P D ++++VW DAL NYL Sbjct: 179 KNPDFVLPNSRYREMYAFIDT-IEDIPITRRKEKLPWGIECPIDKNHVIWVWFDALINYL 237 Query: 240 TTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 T G + W D +H +GKD R HA+ WP L +A +P V+ + F+ Sbjct: 238 TF--------GLQVNSWDEDTEIVHFLGKDNARMHALLWPCMLKAAGYSMPTHVYVNAFL 289 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 G+KISKSLGN++ P +++E G D +RY+ +R +D + + ++ NADLAN Sbjct: 290 SMNGKKISKSLGNIVAPKDLVERYGADPVRYYFLRYGPIIEDSDFSESHFQEVYNADLAN 349 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 G+GN V+R + K + A E ++ L + S+ E R ++ AL + Sbjct: 350 GLGNTVARLAKLAEKSDFSLT----AEKEKKDTFLEL-SQYFDEFRVDL-------ALQK 397 Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 + S ++ +D++ + PW +K N D+ VL + + +A L + FVP + KI I Sbjct: 398 IWSKLANLDKHINENAPWSIK--NNDKLKEVLEYEIGELCNIAELCKPFVPGTSEKILKI 455 Query: 477 L 477 Sbjct: 456 F 456 >gi|13507762|ref|NP_109711.1| methionyl-tRNA synthetase [Mycoplasma pneumoniae M129] gi|2501031|sp|P75091|SYM_MYCPN RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|1673790|gb|AAB95779.1| methionyl-tRNA synthetase [Mycoplasma pneumoniae M129] Length = 512 Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 169/518 (32%), Positives = 262/518 (50%), Gaps = 20/518 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ YI+T I Y + +PHIGHA+ I+ADV+ R+ + +G + F TGTDEHG KI A++ Sbjct: 2 KRCYITTPIYYASGKPHIGHAFTTILADVIKRYKQQNGYEAYFLTGTDEHGNKIESKAKS 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + FVDQN F+ M LDI++D FIRTT+ H + ++ + DKG IY+ + Sbjct: 62 LGLDPQTFVDQNVAYFQQMWKQLDINFDHFIRTTDLSHKAQVQHAFQLLYDKGLIYQSNW 121 Query: 125 SGWYSLRDEAYY--NDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 G Y + E Y D + G + + ++E F +D + + Sbjct: 122 EGAYCVECEQNYFTYDKQTMLCEIG-------HQLTLVQEPSLFIAFKDSKDWIGEMIAT 174 Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 + I P R E+ +F+ GL DL+L+R+ WGI +P D + +YVW DAL NY+T Sbjct: 175 NKLNITPESRAAELKNNFLDGGLNDLALTRQNVTWGIPVPFDNKQTIYVWFDALFNYITN 234 Query: 242 TGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 G+ N D K+W + +H+I ++I RFH IYWP FL LP + SHG+ Sbjct: 235 LGFAHN-DPKFNKWWNNNDEEHEVIHLISREITRFHCIYWPIFLHQLGFKLPTQFLSHGW 293 Query: 296 ILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 I+ G K+SKSLGNVI P E++ + GVD RY L++E+ KD K NADL Sbjct: 294 IVDGNGHKMSKSLGNVISPEELLAQFGVDGTRYCLLKEMRLDKDNRCSMAIFKDIYNADL 353 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 AN GN SR+ MI K G + + ++ ++ + + N ++ + Sbjct: 354 ANSFGNHASRTFGMIKKYLGGQLDFIEVQDPQVKQLMDQANQAMVQFDTAWNNFQFYKGI 413 Query: 415 AQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ LV + + D KPWEL K+T+ +L+ V + +LL + + +I Sbjct: 414 NGLLQLVFQASKLIDQLKPWELVKQTDYTLLKQLLFACVRCTQVCFVLLAPILVHTSTQI 473 Query: 474 FDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510 FD+ + + R L D + L P+F R Sbjct: 474 FDLFNFSAQARSKTHLADPQQLQKISLAPVIQPLFKRL 511 >gi|301633711|gb|ADK87265.1| methionine--tRNA ligase [Mycoplasma pneumoniae FH] Length = 512 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 163/491 (33%), Positives = 253/491 (51%), Gaps = 19/491 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ YI+T I Y + +PHIGHA+ I+ADV+ R+ + +G + F TGTDEHG KI A++ Sbjct: 2 KRCYITTPIYYASGKPHIGHAFTTILADVIKRYKQQNGYEAYFLTGTDEHGNKIESKAKS 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + FVDQN F+ M LDI++D FIRTT+ H + ++ + DKG IY+ + Sbjct: 62 LGLDPQTFVDQNVAYFQQMWKQLDINFDHFIRTTDLSHKAQVQQAFQLLYDKGLIYQSNW 121 Query: 125 SGWYSLRDEAYY--NDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 G Y + E Y D + G + + ++E F +D + + Sbjct: 122 EGAYCVECEQNYFTYDKQTMLCEIG-------HQLTLVQEPSLFIAFKDSKDWIGEMIAT 174 Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 + I P R E+ +F+ GL DL+L+R+ WGI +P D + +YVW DAL NY+T Sbjct: 175 NKLNITPESRAAELKNNFLDGGLNDLALTRQNVTWGIPVPFDNKQTIYVWFDALFNYITN 234 Query: 242 TGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 G+ N D K+W + +H+I ++I RFH IYWP FL LP + SHG+ Sbjct: 235 LGFAHN-DPKFNKWWNNNDEEHEVIHLISREITRFHCIYWPIFLHQLGFKLPTQFLSHGW 293 Query: 296 ILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 I+ G K+SKSLGNVI P E++ + GVD RY L++E+ KD K NADL Sbjct: 294 IVDGNGHKMSKSLGNVISPEELLAQFGVDGTRYCLLKEMRLDKDNRCSMAIFKDIYNADL 353 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 AN GN SR+ MI K G + + ++ + + + N ++ + Sbjct: 354 ANSFGNHASRTFGMIKKYLGGQLDFIEVQDPQVKQLMDQADQAMVQFDTAWNNFQFYKGI 413 Query: 415 AQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ LV + + D KPWEL K+T+ +L+ V + +LL + + +I Sbjct: 414 NGLLQLVFQASKLIDQLKPWELVKQTDYTLLKQLLFACVRCTQVCFVLLAPILVHTSTQI 473 Query: 474 FDILFVADENR 484 FD+ + + R Sbjct: 474 FDLFNFSAQAR 484 >gi|258566610|ref|XP_002584049.1| methionine-tRNA ligase [Uncinocarpus reesii 1704] gi|237905495|gb|EEP79896.1| methionine-tRNA ligase [Uncinocarpus reesii 1704] Length = 445 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 147/395 (37%), Positives = 212/395 (53%), Gaps = 25/395 (6%) Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRL 169 +G IY + GWYS+ DE +Y V+ D V+W E Y FRL Sbjct: 22 RGHIYTAKHEGWYSVSDETFYPSSAVHATLDPATGRKIMSAIETGKEVEWSSETNYHFRL 81 Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYI 227 SA++D+LL +Y +P+FI P ++V+ V SGL DLS+SR + WGI++P D Sbjct: 82 SAFKDQLLDFYNENPKFIRPQRYMDDVVETVSSGLSDLSISRPVQRLTWGIRVPGDETQT 141 Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP 287 +YVW+DAL NYLT GY P WPADLHV+GKDILRFH +YWPAFL++ +LPLP Sbjct: 142 IYVWLDALVNYLTYAGYPFTPGKENKSIWPADLHVVGKDILRFHGVYWPAFLMALDLPLP 201 Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ SH EK+SKS GNV++PI I GVD LR++L R+ D Y+ + Sbjct: 202 RQILSHAHWTIGREKMSKSTGNVVNPIYAITRFGVDPLRFYLARDGGLSDDADYENAFVT 261 Query: 348 KRVNADLANGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399 +R L +GNL SR V I + + G + P +E+D + V Sbjct: 262 ERYKKTLQWALGNLASRLVRSKKWSVRQSIERSFGGELSKP---SEADRKHQELLEEVRD 318 Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL----KKTNPDRASTVLYVTVEVI 455 + M + +A V+ ++ E ++YF PW L + +P+R V+Y T E + Sbjct: 319 VTKTWMDDVNPRKAAESVVGIIYETNKYFQDSSPWSLATQSEMGSPNRLDRVVYNTAESL 378 Query: 456 RQLAILLQAFVPKLANKIFDILFVADE--NRCFQS 488 R ILLQ F+P+ A ++ D+L VA + R F + Sbjct: 379 RIAGILLQPFMPEKAARLLDMLGVAGDPAKRSFNA 413 >gi|316976357|gb|EFV59666.1| tRNA synthetase class I family protein [Trichinella spiralis] Length = 988 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 167/498 (33%), Positives = 259/498 (52%), Gaps = 55/498 (11%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAAQNA 65 +++ I Y N+ PH+GH Y +IAD R+ +L LF++GTDEHG K+ AA A Sbjct: 11 FVTAPIYYANSGPHLGHLYSSLIADAAHRWFKLKNPHQLTLFSSGTDEHGSKVENAALKA 70 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 +N ++ I DFIRT E RHH + + W+ + IYKG YS Sbjct: 71 -----------EKNVDELFSKFGIETTDFIRTVEARHHQSVQQFWEVLRKNNFIYKGKYS 119 Query: 126 GWYSLRDEAYYNDDEVY--KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 GWY DE +YN+ ++ + + A H V+W+ EE Y F+LS + ++ + ++ Sbjct: 120 GWYCSADECFYNESDLCDDETKSCKTTTAGHT-VEWVVEENYLFKLSEFLPEIQHWLQTS 178 Query: 184 P---EFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238 + + P + VI+ +K L D+S+SR + WGI +PDD +YVW DAL NY Sbjct: 179 GMSDDVVQPAQYLPFVINQLKQ-LSDVSISRDRQRLSWGIPVPDDCSQTIYVWFDALVNY 237 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 LT GY G + WP D H+IGKDIL+FHAI WPA LL+AN PLPK++F HG L Sbjct: 238 LTVAGY----PGQLCR-WPPDCHIIGKDILKFHAILWPAMLLAANFPLPKQIFCHGHWLS 292 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 G K+SKSLGNV+DP +++ + LR+ + Y +N +LAN I Sbjct: 293 DGVKMSKSLGNVVDPTLEAQKLTCEGLRFQKLLPD-------YSTPLAISVLNDELANSI 345 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS-RVLQEIRENMQN---------- 407 GNL++R+ S + D FT+ DES+++ S R ++ ++ N Sbjct: 346 GNLINRTTSSRVLRGD-------CFTDFDESVINGPSIRQGPDLMTDLDNLPSIVGQQYD 398 Query: 408 -QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQA 464 + ++++V + + + PW L K + TVL++ + +R ILL+ Sbjct: 399 KMQFSNGINSIVTVVKKANAFVQHFSPWHLAKDKNANSLLDTVLHLAHQTLRTCGILLKP 458 Query: 465 FVPKLANKIFDILFVADE 482 VP +A+++ + L V+ + Sbjct: 459 VVPNIADEMLNRLSVSSD 476 >gi|313217418|emb|CBY38518.1| unnamed protein product [Oikopleura dioica] Length = 568 Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 174/502 (34%), Positives = 270/502 (53%), Gaps = 29/502 (5%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++ I Y + PHIGH + +I D R+++++ + F+ GTDEHGQKI ++A G Sbjct: 43 FVTCPIYYATSSPHIGHIHSSVIGDFYHRWNKINDVASKFSLGTDEHGQKIIRSAAQQGY 102 Query: 68 T-TKVFVDQNSRNFRDMADVLDIS---YDD--FIRTTEKRHHDTCRILWKKISDKGDIYK 121 ++ V+ S +R IS DD F+RTT HH + LW ++ KG I Sbjct: 103 DHPEILVNNISDLYRRTFKKFSISVASLDDAIFMRTTTSEHHQAAQKLWTRLRSKGFIKM 162 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYY 180 Y GWYS DEA+ E+ + DG++++A + + ++W+ EE Y F + +++ S+ Sbjct: 163 QNYEGWYSTPDEAFVGAKEIIE-KDGKHFSAVNGHKLEWVSEENYIFEFEPFLNEIQSWI 221 Query: 181 ESHPEFILPIERR---NEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDAL 235 + + P + +E+ K+G LS+SR WG+ +P+D + MYVW +AL Sbjct: 222 V---KAVAPDAAKILIDELKDRRKTGNMSLSISRPRNRVPWGVAVPNDANHTMYVWFEAL 278 Query: 236 TNYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 NYLT GY G+ A +FWP L VIG DI RFH I+WPA LL+A LPLPKKVF HG Sbjct: 279 INYLTAAGY--GKHGNNALEFWPPQLQVIGIDIARFHCIFWPAMLLAAELPLPKKVFVHG 336 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 G K+SKSL N + P E++E VG DA+R+F ++ F D + L+ + +A Sbjct: 337 HWTRDGMKMSKSLDNFVTPKELLELVGNQSDAVRWFCLKHATLKNVDFQD-ELLRIQSDA 395 Query: 353 DLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ- 408 DLAN I NL+SR+ S L Y + P E L + L E+ + N Sbjct: 396 DLANKIANLLSRTTSKNLNPSGAYPTLFPDSLLNAPDGEKYLIETVQELPELYASFVNAG 455 Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELK---KTNPDRASTVLYVTVEVIRQLAILLQAF 465 + A+ VI + E ++ +K ++L K+ + + L+ E++R AILLQ Sbjct: 456 QLPNAMNCVIRAIEEGLQFMTNEKIFKLDRDIKSERMKKDSALHACYELLRVSAILLQPA 515 Query: 466 VPKLANKIFDILFVADENRCFQ 487 +P++++KI + L + ENR F+ Sbjct: 516 IPQISSKILNRLGIPLENRYFE 537 >gi|312377089|gb|EFR24006.1| hypothetical protein AND_11736 [Anopheles darlingi] Length = 495 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 132/339 (38%), Positives = 193/339 (56%), Gaps = 10/339 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRL----DGLDVLFTTGTDEHGQKIAKAAQ 63 +++T I Y NA PHIGH Y +IAD + RF+R+ +TGTDEHG KI +AA Sbjct: 18 FVTTPIFYVNAAPHIGHLYSAVIADAVHRFNRIATPEKSRSCFLSTGTDEHGMKIQQAAV 77 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 +T+ + + S +R++ + Y FIRTTE H + W+ + G IY Sbjct: 78 LHSTSTEDYCNSISARYRELFRQFRVDYSRFIRTTETDHRRAVQTFWRTLEASGSIYSAN 137 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y+GWY + DE + + ++ + G+ + + +PV+W EE+ Y FRLS YQD++ + +S Sbjct: 138 YAGWYCVPDETFLTESQLKENERGEKCSLESGHPVEWTEEQNYMFRLSQYQDEVRYWVKS 197 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLT 240 + + P + R ++ ++ L D+S+SR WGI +P DP +YVW+DAL NYLT Sbjct: 198 SEDRVQPEKFRRILLDYLDEPLPDISISRPIGRVSWGIPVPTDPSQSVYVWLDALVNYLT 257 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 GY P A WP + V+GKDIL+FH IYWPAFLL+A L P+++ H Sbjct: 258 VVGY---PKEGFAAQWPPSVQVLGKDILKFHGIYWPAFLLAAKLEPPRQLLVHSHWTVDN 314 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 +K+SKS NV+DP E E + LRYFL+RE DG Sbjct: 315 QKMSKSKFNVVDPAERAELYTHEGLRYFLLREGVAHSDG 353 Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 4/60 (6%) Query: 433 PWELKKTNP--DRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488 PW+LKK+ DRA + +L +T+EV+RQ AI++Q +P L ++ D L + R +++ Sbjct: 388 PWKLKKSESPDDRAMLNAILTITMEVLRQTAIVMQPIIPVLTERLLDKLNIPTSARTWEN 447 >gi|218678320|ref|ZP_03526217.1| methionyl-tRNA synthetase [Rhizobium etli CIAT 894] Length = 229 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 113/201 (56%), Positives = 160/201 (79%) Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302 GY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KGEK Sbjct: 1 GYIEDKNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKGEK 60 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKSLGNV+DP+ ++ G+D +RYF +RE++ G+DG Y ++ + R+N+DLANGIGNL Sbjct: 61 MSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIGIRINSDLANGIGNLA 120 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 SRS+SMI+K+ DG IP G ++ D+++L+ + E+M Q IHRALA +I++VS Sbjct: 121 SRSLSMIVKNCDGKIPECGPLSDEDKAMLAQADALHASTCEDMGKQQIHRALASIIAVVS 180 Query: 423 EVDRYFDAQKPWELKKTNPDR 443 E DRYF Q PW LKKT+P+R Sbjct: 181 ETDRYFAGQAPWALKKTDPER 201 >gi|118399643|ref|XP_001032146.1| methionyl-tRNA synthetase [Tetrahymena thermophila] gi|89286484|gb|EAR84483.1| methionyl-tRNA synthetase [Tetrahymena thermophila SB210] Length = 540 Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 153/499 (30%), Positives = 258/499 (51%), Gaps = 47/499 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +++ I+T I Y N+QPHIGH Y +I++D ++ +D + F TGTDEHGQKI +A+ Sbjct: 16 NKQISITTPIFYVNSQPHIGHLYTLILSDAYHKWKLIDNYESYFQTGTDEHGQKIQNSAK 75 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 A + FVDQ S+ F D+A ISYD F RT++++ Sbjct: 76 QAQKDPQQFVDQVSQKFVDLASQYSISYDKFNRTSDEK---------------------- 113 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y GWY DE + + ++ K + G++ PV W+ EE + F L ++ ++ Y E+ Sbjct: 114 YEGWYHTSDETFVGEKDLVKDSSGKFVTQSGQPVDWVSEETHIFVLDKIREAVIKYLENE 173 Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 + P N +I ++ LKD+S+SR WGI +P + +Y +YVW+DALTNYLT Sbjct: 174 KP-VYPEHYNNSMIKQLEE-LKDISISRPKSRLTWGITVPSNEKYTIYVWLDALTNYLTG 231 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY +N + +K H++GKDIL+FH+I+WPAFLL+A P+K+ H + + Sbjct: 232 LGYPNN-NINKIHLSNNFFHIMGKDILKFHSIFWPAFLLAAGYSTPQKILIHHHWIKDNQ 290 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+DP+E+ + G+D++R + + E D +D+ L K N G NL Sbjct: 291 KMSKSLGNVVDPVELGNKYGIDSVRLYFLSEGPQDFDANFDEVDLTKTYNL-FIEGFSNL 349 Query: 362 VSRS-----------VSMILKDYDGMIPTPGAFT-------ESDESILSVCSRVLQEIRE 403 S V+++ + ++ I G T E D +S + + +I+E Sbjct: 350 NSIKIINAKHNIQFLVNLMSRVFNKKIIKDGKITEISWVLNEQDLEYISKFTTISNKIQE 409 Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463 ++ R + L ++ PW+ + ++ + Y+ +E +R L+I L Sbjct: 410 HLDKCDFRRGYFAMSELWGMTNKLMTDHAPWQKDISEVEKQKSS-YLILESVRVLSIFLY 468 Query: 464 AFVPKLANKIFDILFVADE 482 F+P+ ++ ++ + ++ Sbjct: 469 PFIPQYIQNVYQLMNIKND 487 >gi|256071351|ref|XP_002572004.1| methionine-tRNA synthetase [Schistosoma mansoni] gi|238657154|emb|CAZ28234.1| methionine-tRNA synthetase, putative [Schistosoma mansoni] Length = 589 Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 166/542 (30%), Positives = 253/542 (46%), Gaps = 104/542 (19%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL--------------- 46 + + +I+ I Y NA+PH+GHAY +AD AR+ L +L Sbjct: 52 RSEKPFFITCPIFYVNAKPHLGHAYTTCLADAWARYSCLRNQPILKPFQQDYIASTYSPV 111 Query: 47 ----------FTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96 + GTDEHG K + + Y+DFIR Sbjct: 112 FDYCNLNKTFLSCGTDEHGSKT------------------------LCHATHVKYNDFIR 147 Query: 97 TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-- 154 TTE RH W +++ G++Y+ YSGWY + DEA+Y E+ + + ++ Sbjct: 148 TTETRHVKAVHEFWNRLNASGNVYRSKYSGWYCVSDEAFYTPWEIDETSLSGVPVSKETG 207 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL----KDLSLS 210 NPV+W+EEE Y F+LS++++ L + +S + P V + + +D+S+S Sbjct: 208 NPVEWIEEENYMFKLSSFKNDLHKWLDSG---VFPKSSNQSVWCNMAHNMVGNSQDISIS 264 Query: 211 R--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY--LDNPDGS-KAKFWPADLHVIGK 265 R DWGI +P D + I+YVW DAL NYLT TG+ + DGS K WP D+ +GK Sbjct: 265 RPKSRSDWGIHVPGDNEQIVYVWFDALINYLTVTGFPWSNVNDGSFKQSLWPPDVQFLGK 324 Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI----------- 314 DI+RFHA+ WPA L++ NLPLP+ + H +L K+SKS GN +DPI Sbjct: 325 DIIRFHAVLWPALLMAVNLPLPRLLICHHHVLVDNVKMSKSRGNQVDPIVEQSALLSDEL 384 Query: 315 --EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 VI D LRY L+R DG Y ++ +K +N +L N IGNL+SR +S L Sbjct: 385 NSNVITPAESDLLRYVLLRLPLLTYDGTYSREMARKMINTELVNWIGNLLSRIISESLNP 444 Query: 373 YDGMI-----PTPGAFTESDESILSVCSRVLQEIRENMQN------------QLIHRALA 415 +I F D + E +N+ N H+A+ Sbjct: 445 EQSIIQINRQQVDDMFYNDDSDM---------EFFDNLDNISHHFDKLWWYEAQPHKAIE 495 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 +V+ ++ + + + PW ++ R +L V E +R A+LLQ +P L+ ++ Sbjct: 496 EVLGIIRQTNEFITRHSPWTEREL--LRRQFILSVVSESLRICALLLQPVIPNLSIRLLH 553 Query: 476 IL 477 L Sbjct: 554 RL 555 >gi|189218093|ref|YP_001938735.1| Methionyl-tRNA synthetase [Methylacidiphilum infernorum V4] gi|189184951|gb|ACD82136.1| Methionyl-tRNA synthetase [Methylacidiphilum infernorum V4] Length = 444 Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 149/417 (35%), Positives = 228/417 (54%), Gaps = 15/417 (3%) Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + K F D + F + + L I YD F RTT+ H R +K++DKG IY + G Sbjct: 1 MEVKKFCDIQAEKFLQLWEKLQIHYDAFARTTQPSHVQYVRHALQKLADKGLIYFKEHEG 60 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186 +YSLR E + + ++ G + Y V +E YFFRLSA+ + L SY + + Sbjct: 61 YYSLRQEQFVTEKDLVDGKWPEIYGE----VIKTKEPNYFFRLSAFSEWLKSYVRDNENW 116 Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 +P +R E++ ++ L DL +SR WGI +P D Y+ YVW DAL NY++ Sbjct: 117 FIPQSKRKELLGALERPLADLCISRPVSRLSWGIPLPFDENYVTYVWFDALLNYVSFA-- 174 Query: 245 LDNPDGSKAKFWPADLHVIGKDI-LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 +G +WPA LHVIGKDI + HAIYWP L + L P+ HG+ ++KG K+ Sbjct: 175 --RKEGDNQGWWPAQLHVIGKDIFIPAHAIYWPIILKALELEQPRHFLIHGWWMNKGAKM 232 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGN IDP+ +E G DALRY+L+RE+A G+D + D + R N+DL N +GNLV Sbjct: 233 SKSLGNFIDPLPYLEIFGADALRYYLLREMAFGQDADFADDKIWARYNSDLCNDLGNLVQ 292 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSR-VLQEIRENMQNQLIHRALAQVISLVS 422 R MI K G+IP+ T +E+ + R + ++ + + I +AL ++ + Sbjct: 293 RITVMIHKYRSGVIPSCSE-TMMEENEKELLDRDLFEKYCLSFEKYDIAQALQEIWQHIK 351 Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +++RY + PW L K + R +L + +++ A+L+ +P+ ANKI +L Sbjct: 352 KLNRYIENNAPWSLAKNSKQSQRLDCILLASSICLKRYALLIDPVMPQTANKILSLL 408 >gi|225680905|gb|EEH19189.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03] Length = 487 Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 142/383 (37%), Positives = 217/383 (56%), Gaps = 28/383 (7%) Query: 124 YSGWYSLRDEAYYNDDEVYKGAD---GQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177 + GW+S+ + A+Y V D G+ A VQW EE Y FRLSA+++ LL Sbjct: 68 HEGWFSVSERAFYPPSAVQPILDPSTGRKIIASIETGKEVQWTSEENYHFRLSAFKEPLL 127 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235 +Y +HP FI P +++++ + +GL+DLS+SR +WGI +P D ++YVW+DAL Sbjct: 128 EHYRNHPNFITPKHYMDDMMNAISAGLQDLSISRPASRLNWGIPVPYDESQVIYVWLDAL 187 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 NY+T GY PD WPAD+ V+GKDILRFH IYWPAFL++ LPLP+++ +H Sbjct: 188 VNYITYAGYPFPPDAKS--IWPADVQVVGKDILRFHCIYWPAFLMALGLPLPRQIMAHAH 245 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 EK+SKS GNV++P IE GVD +R+FLV + A D Y+ + +R L Sbjct: 246 WTINNEKMSKSTGNVVNPYFAIERFGVDTVRFFLVIDGAQVSDSGYENSYIVERYKKGLQ 305 Query: 356 NGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 G+GNL SR + S ++ +G P TE + + S+ + R+ M+ Sbjct: 306 RGLGNLASRVLRGKKWIVRSSVVMAGEGRFPR----TEHQDFLESIPEKA----RDEMRQ 357 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 +AL ++ ++ + ++YF KPW L +N ++V+Y T E +R ILLQ F+P Sbjct: 358 LDPRKALNSIMEIIIQTNKYFHQMKPWILAMSNVVMLNSVIYSTAESLRIAGILLQPFMP 417 Query: 468 KLANKIFDILFVAD--ENRCFQS 488 + ++++ D+L VA E R F + Sbjct: 418 QKSSELLDMLGVARAAEKRNFDA 440 >gi|255575064|ref|XP_002528437.1| methionine-tRNA synthetase, putative [Ricinus communis] gi|223532113|gb|EEF33920.1| methionine-tRNA synthetase, putative [Ricinus communis] Length = 523 Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 131/295 (44%), Positives = 174/295 (58%), Gaps = 6/295 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E ++T + Y NA PH+G AY I AD +ARF RL G V+F TGTDEHG+KIA AA Sbjct: 79 ETFVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLGKKVIFVTGTDEHGEKIAAAAAA 138 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G + D S+++R + L+ISYD FIRTT+ +H + + ++ GDIY+ Y Sbjct: 139 CGSSPSEHCDVISQDYRTLWKDLEISYDKFIRTTDPKHEAIVKEFYSRVLANGDIYRADY 198 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G Y + E Y + E+ D P +E+ YFF LS YQ L +P Sbjct: 199 EGLYCVNCEEYKDAKELL---DNNCCPMHLKPCIERKEDNYFFALSKYQKLLEETLTENP 255 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG- 243 F+ P R NEV S++KSGLKD S+SR + DWGI +P+D + +YVW DAL Y++ Sbjct: 256 NFVQPSFRLNEVQSWIKSGLKDFSISRASVDWGIPVPNDNKQTIYVWFDALLGYISALSE 315 Query: 244 --YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 N + + WPA LH+IGKDILRFHA+YWPA L+SA L LPK VF HGF+ Sbjct: 316 DKEQPNLQNAVSSGWPASLHLIGKDILRFHAVYWPAMLMSAGLGLPKMVFGHGFL 370 >gi|304314728|ref|YP_003849875.1| methionyl-tRNA synthetase [Methanothermobacter marburgensis str. Marburg] gi|302588187|gb|ADL58562.1| methionyl-tRNA synthetase [Methanothermobacter marburgensis str. Marburg] Length = 652 Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 162/528 (30%), Positives = 266/528 (50%), Gaps = 41/528 (7%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K++I+ A+ Y N H+GH I AD+ AR+ RL G DVLF TDEHG IA A++ Sbjct: 3 KVFITCALPYANGPTHLGHLRSTYIPADIYARYRRLRGDDVLFVCATDEHGTPIAVKAES 62 Query: 65 AGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ +V N RD+ + DIS+D F RTT+ H++ + + K+ +KG IY+ Sbjct: 63 EGLKPIEVATRYNEMIKRDLEEC-DISFDSFTRTTDDLHYEIAQNFFLKLYEKGYIYEKD 121 Query: 124 YSGWYSLRDEAYYNDDEVY--------KGADGQYYNAQHNPVQWMEEEG----------- 164 Y + + D V +GA G + + ++ ++ E Sbjct: 122 IKQLYCNSCQRFLPDRYVEGICPHCGGEGARGDHCESCGRHLEPLQLEDPVCMVCGSEPV 181 Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 YFFRLS +QDKL+ + E +P +N + +++ GL+D L+R DWG+ Sbjct: 182 VRDSRHYFFRLSQFQDKLMEWI---GESDMPSNVKNYALQWLREGLRDWILTRD-MDWGV 237 Query: 219 KIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD-LHVIGKDILRFHAIY 274 +P + I+YVW +A Y+++ G + +W A +H IGKDI+ HAI+ Sbjct: 238 PVPLEGNDGKIIYVWGEAFLGYISSAAAWSRKTGKPWREYWDAGAVHFIGKDIIYHHAIF 297 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L++ +P+ + + ++ +G K+S S V+ + +E D LRY+L Sbjct: 298 WPALLMAYGCRIPENIIAGEYLSLEGRKMSTSKNWVVWTSDFLERFHKDLLRYYLTVNAP 357 Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 +D + D ++RVN +LA+ +GN + R+ S + +DG +P P T DE L+ Sbjct: 358 LTRDTDFSWDDFQRRVNDELADVLGNFLHRTFSFTGRFFDGRVPEPSELTAEDEEFLNSI 417 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 R + E ++N A+ VI L + ++YF+ Q+PW K +P+RAST L++ + Sbjct: 418 RRAPDTVGELLENFQFRDAMMSVIKLAKKGNKYFNDQEPWRAIKESPERASTCLHLCNLL 477 Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD-----QRLKPGF 497 L LL F+P A ++ I+ + DE F L+ +R +P F Sbjct: 478 AANLGKLLMPFMPSSAGRVLSIMNMEDEPWGFHELEAGRVIERARPLF 525 >gi|115625231|ref|XP_001204341.1| PREDICTED: similar to putative methionyl tRNA synthetase, partial [Strongylocentrotus purpuratus] gi|115634863|ref|XP_782491.2| PREDICTED: similar to putative methionyl tRNA synthetase, partial [Strongylocentrotus purpuratus] Length = 305 Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 122/285 (42%), Positives = 172/285 (60%), Gaps = 14/285 (4%) Query: 18 AQPHIGHAYEMIIADVLARFHR-LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76 ++PHIGH Y +AD R+ R L D +F TGTDEHG K+ KAA+ AG F ++ Sbjct: 19 SEPHIGHLYSACLADAAHRWQRILKAPDSIFATGTDEHGLKVQKAARTAGKEPLTFCNEV 78 Query: 77 SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYY 136 S FR + ++ +I Y DFIRTTE+RHH W + +KG IYKG Y GWYS+ DE++ Sbjct: 79 SHEFRRLFEMCNIGYTDFIRTTEERHHTAVHEFWTSLREKGFIYKGEYEGWYSVTDESFL 138 Query: 137 NDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191 ++ + G + N V+W E Y FRLSA++DKLL + + +P + P + Sbjct: 139 TTSQIQEIDRGDGTTIKVSLESGNVVEWTSETNYMFRLSAFRDKLLRWLDDNPSAVQPAK 198 Query: 192 RRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD 249 + V ++ G++DLS+SR+ WGI +PDDP +YVW+DAL NYLT +GY D Sbjct: 199 FHSIVRHWLNEGIQDLSVSRQRDRLGWGIPVPDDPSQTIYVWMDALVNYLTVSGYPD--- 255 Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 + WP H++GKDIL+FHAIYWPAFL++A++ P V H Sbjct: 256 --RTHLWPP-THIVGKDILKFHAIYWPAFLMAADISPPASVICHS 297 >gi|326437155|gb|EGD82725.1| hypothetical protein PTSG_03376 [Salpingoeca sp. ATCC 50818] Length = 436 Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 152/438 (34%), Positives = 230/438 (52%), Gaps = 34/438 (7%) Query: 83 MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY 142 M V ++ FIRTT H W+ I KG I G Y GWYS+ DEA+Y+ +V Sbjct: 1 MNGVCNVQPSRFIRTTSPEHKRAVDQFWRTIESKGHIRLGKYKGWYSVVDEAFYSAHQV- 59 Query: 143 KGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198 + G N + + V+ E+ Y F L+A + K+ + S P + P R++V+S Sbjct: 60 EPDPGNPANMRAVETGSAVEEYTEDNYMFNLNAMKGKVREWLLSSPTTVYPSVYRHQVLS 119 Query: 199 FVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255 F+ L DLS+SR + WGI +P + + +YVW+DAL NYLT GY D G+ Sbjct: 120 FLDDADLPDLSVSRLRSSLAWGIPVPTNENHTIYVWMDALVNYLTALGYPDQLTGT---- 175 Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315 D HVIGKDIL+FHA+YWPAFLL+A L P+++ HG G K+SKS+GNV+DP+ Sbjct: 176 --LDTHVIGKDILKFHAVYWPAFLLAAGLNPPRRILVHGHWTVAGAKMSKSVGNVVDPLV 233 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDY 373 ++VG D LR++L++E G D + K+R A +LAN GNL+SRS + Sbjct: 234 EADDVGSDLLRFYLLKEARLGSDADFSH---KRRDAAISELANNFGNLLSRSTGKRVNPT 290 Query: 374 DGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 + P T+ ++ + V + + ++E + + + +++ + E ++YF + Sbjct: 291 NTYPPLADVKLTQREQHVADVINNTQRRVQELYASGDVGLGIEEILHCLREGNKYFQEME 350 Query: 433 PWELKKTNPDRAS-----TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC-- 485 PW+L K D A+ LY T E++R +++LL P ++ D L VA N Sbjct: 351 PWKLAKLKDDAAAQHRRLACLYTTYELLRVVSLLLCPVTPAISAACLDKLAVAPSNGSAF 410 Query: 486 FQSL-------DQRLKPG 496 QSL LKPG Sbjct: 411 CQSLAFSYNKGGHALKPG 428 >gi|313611386|gb|EFR86080.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL F2-208] Length = 242 Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 113/242 (46%), Positives = 171/242 (70%), Gaps = 7/242 (2%) Query: 34 LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93 +AR+ RL G DV + TGTDEHGQKI A+ G++ + +VD+ + F+++ L+IS D Sbjct: 1 MARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDEIAEGFQELWKKLEISNTD 60 Query: 94 FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND---DEVYKGADGQYY 150 FIRTT+ RH + +++++ ++GDIY G Y GWYS+ DE Y+ + +EVYK +G+ Sbjct: 61 FIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEYFTETQLEEVYKDENGKVI 120 Query: 151 NAQH---NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKD 206 + N V+ ++EE FR+S Y D+L+ YY SHPEFILP R+NE+I +F+K GL+D Sbjct: 121 GGKAPSGNEVELVKEESXXFRMSKYADRLVEYYNSHPEFILPESRKNEMINNFIKPGLED 180 Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266 L++SR TFDWGIK+P +P++++YVWIDAL+NY+T GY + D K+WPAD+ ++GK+ Sbjct: 181 LAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITALGYNTDNDTKFQKYWPADVQIVGKE 240 Query: 267 IL 268 I+ Sbjct: 241 IV 242 >gi|321309548|ref|YP_004191877.1| methionyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1] gi|319801392|emb|CBY92038.1| methionyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1] Length = 519 Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 151/524 (28%), Positives = 271/524 (51%), Gaps = 25/524 (4%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + +YI+T + YP+ +PH+GHA+ +++ADVL ++ G GTDEHG+K+ Sbjct: 1 MAKDRSVYITTPLFYPSDKPHLGHAFTVVLADVLKLSYKQLGYGGYLVVGTDEHGEKMLA 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA A + FV+ N +F+ + + L I YD F+RT++ H + ++ ++ I+ Sbjct: 61 AADAAQTPVERFVESNVLHFKSLWETLGIKYDRFVRTSDHAHRALVKQVFLQLLSDNQIF 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 + GWY E ++D + K + +P+ E+ YF R++++++ L + Sbjct: 121 IDEWRGWYCTSCEESFSDRFIGKKSTCPI----GHPLTLRAEKTYFLRVTSFRNWLRREF 176 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 E++ + I P + + E+++ + L DLS++R+ DWGIK+P+D + +YVW DAL YLT Sbjct: 177 EANKDLIYPDKYKTELMNNFINDLDDLSITREGLDWGIKVPEDEDHTIYVWFDALIAYLT 236 Query: 241 -----------TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289 TT + + + SK K + +IGK++ RFHAIYWP L + + L Sbjct: 237 ALNFGNYGRTNTTTFKNYWESSKCKV----IQIIGKEVCRFHAIYWPIMLKNLKVRLFDN 292 Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 + HG++L EK+SKS NVIDP E++ + + LR++L R I+ D + D + Sbjct: 293 LLVHGWLLMNNEKMSKSKKNVIDPKEILNLMPREGLRFYLAR-ISILGDANVNVDDIFSV 351 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPT---PGAFTESDESILSVCSRVLQEIRENMQ 406 N+ L N GNL+SR ++ + Y+ +P P +F E D+ + + + + + Sbjct: 352 YNSYLVNTYGNLISRFYGIMGRKYENTLPNQWDPESFIEIDQLNIELDEFLNNGYEKEVL 411 Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466 N I + +V + + + K WEL+K + T++ +++ L + Sbjct: 412 NNTISPIIEKVFEIFRSAGKLIEKNKAWELEKGDL-LLDTLMVFIYKLLCIGTWFLHPIL 470 Query: 467 PKLANKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPR 509 A K++DIL ++ + + L QRL ++ + +FPR Sbjct: 471 IDTAPKLYDILNISPKKVGIEYLQQQRLYFKKKINDLPENLFPR 514 >gi|15678615|ref|NP_275730.1| methionyl-tRNA synthetase [Methanothermobacter thermautotrophicus str. Delta H] gi|3122905|sp|O26687|SYM_METTH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|2621666|gb|AAB85093.1| methionyl-tRNA synthetase [Methanothermobacter thermautotrophicus str. Delta H] Length = 651 Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 160/527 (30%), Positives = 256/527 (48%), Gaps = 39/527 (7%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K++I+ A+ Y N H+GH I AD+ AR+ RL G DVLF TDEHG IA A+ Sbjct: 3 KVFITCALPYANGPTHLGHLRSTYIPADIYARYRRLRGDDVLFVCATDEHGTPIAVKAEA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G T + R + DIS+D F RTT++ HH+ + + K+ +KG IY+ Sbjct: 63 EGRTPLEVATRYHEMIRGDLERCDISFDSFTRTTDELHHEIAQKFFLKLYEKGFIYEKDI 122 Query: 125 SGWYSLRDEAYYNDDEV-----YKGADGQYYN-----AQH-NPVQW-------------- 159 Y + + D V Y G++G + +H P+Q Sbjct: 123 KQLYCGDCQRFLPDRYVEGTCPYCGSEGARGDHCEGCGRHLEPLQLEDPRCMVCGSEPEV 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + YFFRL+ +QD++ + E +P RN I +++ GLKD L+R +WG++ Sbjct: 183 RDSRHYFFRLNQFQDEIREWIEGSE---MPSNVRNYAIQWLREGLKDWILTRD-MEWGVQ 238 Query: 220 IP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD-LHVIGKDILRFHAIYW 275 +P + I+YVW +A Y+++ G + +W + +H IGKDI+ HAI+W Sbjct: 239 VPLEGNEGKIIYVWGEAFLGYISSAAAWSKKTGRDWREYWDSGAIHFIGKDIIYHHAIFW 298 Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 PA L++ P + + ++ +G+K+S S V+ + +E D LRY+L Sbjct: 299 PALLMAYGCRTPANIIAGEYLSLEGQKMSTSKNWVVWTSDFLERFDRDLLRYYLTVNAPL 358 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 +D + D ++RVN +LA+ +GN + R+ S + +DG +P G T D L Sbjct: 359 TRDTDFSWDDFQRRVNDELADVLGNFLHRTFSFTGRFFDGRVPAAGELTAEDLEFLESIR 418 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 + E + AL +I L ++YF+ Q+PW+ K +P RAST L++ + Sbjct: 419 AAHDTVAELLDKFQFRDALMHIIKLAKRGNKYFNDQEPWKAVKESPARASTCLHLCNLLA 478 Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLD-----QRLKPGF 497 L LL+ F+P A +I I+ + DE F L +R KP F Sbjct: 479 ANLGKLLRPFMPSAAGRILSIMNLEDEAWGFHELREGQVIERAKPLF 525 >gi|302023995|ref|ZP_07249206.1| methionyl-tRNA synthetase [Streptococcus suis 05HAS68] Length = 487 Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 130/345 (37%), Positives = 205/345 (59%), Gaps = 15/345 (4%) Query: 176 LLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 ++ Y+ +HP+FI P R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDA Sbjct: 1 MVEYFNAHPDFIQPDGRMNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDA 60 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 L NY T GY + KFW + H++GKDILRFH+IYWP L+ ++ LP +F+H Sbjct: 61 LLNYATALGYGQEETINYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDLLFAH 120 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G+ + K K+SKS GNV+ P ++E G+D LRY+L+R + G DG + + R+N + Sbjct: 121 GWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYE 180 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412 LAN +GNL++R+V+MI K + G +PT A T+ D + +V + L + M+ R Sbjct: 181 LANDLGNLLNRTVAMINKYFSGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPR 240 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILLQAFVPKL 469 AL V +++S ++Y D PW L K DR A+ + ++T +R +A L+Q F+ Sbjct: 241 ALEAVWNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAG-LRVVAHLIQPFMMTT 299 Query: 470 ANKIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 +N I + L + EN F L G + PIFPR Sbjct: 300 SNAIMEQLGLGTAFDLENLDFAG----LPAGLTVVAKGTPIFPRL 340 >gi|76664782|emb|CAJ17829.1| methionyl-tRNA synthetase [Candidatus Phytoplasma solani] Length = 280 Score = 236 bits (601), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 120/283 (42%), Positives = 182/283 (64%), Gaps = 6/283 (2%) Query: 74 DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133 + NS + + D++ +SYD FI+TT+K H + + ++ K+ +GDIY G Y G YS+ +E Sbjct: 2 NHNSSEIKRIYDLMQVSYDYFIKTTDKAHQASVQAIFDKLHQQGDIYLGRYQGLYSVAEE 61 Query: 134 AYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193 AY ++ ++ DG+ +N + P+ + E+ YFF+LS YQ KLL Y ES+P+ I P +R Sbjct: 62 AYISEKDL---VDGKTFNGE-TPI-LITEKTYFFKLSKYQSKLLDYLESNPDLIKPKTQR 116 Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK- 252 E+++ +K L DLS+SR +F WGI + + ++++YVWIDAL+NYLT GY N + Sbjct: 117 KELLNLLKEPLDDLSISRTSFKWGIPVSFEQKHVIYVWIDALSNYLTGLGYHPNETSQQF 176 Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312 +WP DLHVIGKDILRFH IYWP L++ + LPK+ H +IL K+SKS GNV+ Sbjct: 177 LHYWPCDLHVIGKDILRFHLIYWPILLMALKIKLPKQFLIHPWILFDKNKMSKSKGNVLY 236 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 ++++ VD +RYF++ EI DG + L +R N+DL Sbjct: 237 VDDLLKIFSVDTIRYFVLHEIPYANDGNITYELLAERHNSDLV 279 >gi|299748517|ref|XP_001839197.2| methionine-tRNA synthetase [Coprinopsis cinerea okayama7#130] gi|298408008|gb|EAU82630.2| methionine-tRNA synthetase [Coprinopsis cinerea okayama7#130] Length = 516 Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 149/486 (30%), Positives = 243/486 (50%), Gaps = 48/486 (9%) Query: 45 VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104 V GTDEHG KI +AA A F ++ S+ F+D++ +ISY F RTT H + Sbjct: 15 VKLLVGTDEHGLKIQQAAAKASTEVLTFCNELSQVFKDLSKKANISYTTFSRTTGDNHKE 74 Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH------NPVQ 158 +W+ + DKG IYKG Y GWYS+ DE +Y ++ + N ++ + V+ Sbjct: 75 LVAQVWRTLLDKGYIYKGEYEGWYSITDECFYTSAQIVQSPTSTAENPEYVSKETGSKVE 134 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-----KSG--LKDLSLS- 210 W +E Y FRLS ++D L+ +Y S + P + + V+ + SG L D+S+S Sbjct: 135 WSKEYNYMFRLSMFRDALVKHY-SDRSVVQPSQYNSVVLQMLGATEDSSGVELADISISR 193 Query: 211 -RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDIL 268 R WGI +P+DP++ +YVW DAL YL+ GY + P WP +L VIGKDIL Sbjct: 194 PRSRLTWGIPVPNDPEHTVYVWFDALLIYLSGVGYQVSGPPAVTG--WPPNLQVIGKDIL 251 Query: 269 RFHAIYWPAFLLSANLP-------------------LPKKVFSHGFILHKGEKISKSLGN 309 RFHA+Y PA L++ P LPK + +H +K+SKS+GN Sbjct: 252 RFHALYLPAILMALGAPSHAALKDLSATQILEKSVGLPKTLLTHAHWTVSQQKMSKSVGN 311 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKD----GFYDKDGLKKRVNADLANGIGNLVS-R 364 V+DP++ +++ G+D +R++L R +D F + K + + L N + + S R Sbjct: 312 VVDPMQSVDKYGLDIVRFYLARVGGRFRDDVDWSFEQLEKHSKELQSLLGNYLLRITSAR 371 Query: 365 SVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 + Y+ +P A + R +QE+ N++ + AL+ ++ ++ Sbjct: 372 ITAAAAAGYEQQSEASPHALNLELAREVDALPRRVQELMNNLE---VADALSSILDVLKL 428 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 ++ PW K +P ++ +R I LQ FVP+ + ++ D L +A E+ Sbjct: 429 ANKVITDIAPWS-KTCSPALVYETRRTALDTLRVTGICLQPFVPETSERLLDALGLAPED 487 Query: 484 RCFQSL 489 R ++S+ Sbjct: 488 RTWRSI 493 >gi|297669112|ref|XP_002812750.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like isoform 2 [Pongo abelii] Length = 542 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 158/507 (31%), Positives = 231/507 (45%), Gaps = 93/507 (18%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAA 62 + Y +T I Y NA PHIGH Y ++AD L R RL G F+TGTDEHG KI +AA Sbjct: 64 RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 123 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ DQ S F+ + IS+ W K + Sbjct: 124 ATAGLAPTELCDQVSEQFQQLFQEAGISFS-----------------WTKEEN------- 159 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSY 179 Y R + + + + Q + H +QW++EE D +S Sbjct: 160 -----YIFRLSQFREPLQRWLRGNPQAITPEPFHHVVLQWLDEE--------LPDLSVSR 206 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 SH WGI +P D +YVW+DAL NYL Sbjct: 207 RSSH------------------------------LHWGIPVPGDDSQTIYVWLDALVNYL 236 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T GY P+ +WPA H+IGKDIL+FHAIYWPAFLL A + P++++ H Sbjct: 237 TVIGY---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSHWTVC 293 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G+K+SKSLGNV+DP + VD RYFL+R+ D Y + + K +N++LA+ +G Sbjct: 294 GQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELADALG 353 Query: 360 NLVSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILSVCSRVLQEIRENM 405 L++R + + + Y T PG S D +++S + + +++ ++ Sbjct: 354 GLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQVADHY 413 Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILL 462 N I++AL V S V + + + PW+L +P A TVL+V +E +R LL Sbjct: 414 DNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVFGTLL 473 Query: 463 QAFVPKLANKIFDILFVADENRCFQSL 489 Q P LA+K+ L V+ R L Sbjct: 474 QPVTPSLADKLLSRLGVSASERSLGEL 500 >gi|297264627|ref|XP_002799060.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like isoform 2 [Macaca mulatta] Length = 522 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 156/500 (31%), Positives = 232/500 (46%), Gaps = 93/500 (18%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAAQN 64 Y +T I Y NA PHIGH Y ++AD L+R RL G F+TGTDEHG KI +AA Sbjct: 46 YFTTPIFYVNAAPHIGHLYSALLADALSRHRRLRGPSTAATRFSTGTDEHGLKIQQAAAT 105 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG+ D+ S++F+ + IS+ W K + Sbjct: 106 AGLAPTELCDRVSKHFQQLFQEAGISFS-----------------WTKEEN--------- 139 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 Y R + + + + Q + H +QW++EE D +S Sbjct: 140 ---YIFRLSQFREPLQRWLRGNPQAITPEPFHHVVLQWLDEE--------LPDLSVSRRS 188 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 SH WGI +P D +YVW+DAL NYLT Sbjct: 189 SH------------------------------LHWGIPVPGDDSQTIYVWLDALVNYLTV 218 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301 GY P+ +WPA H+IGKDIL+FHAIYWPAFLL A + P++++ H G+ Sbjct: 219 IGY---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSHWTVCGQ 275 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGNV+DP + VD RYFL+R+ D Y + + K +N++LA+ +G L Sbjct: 276 KMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELADALGGL 335 Query: 362 VSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILSVCSRVLQEIRENMQN 407 ++R + + + Y T PG S D +++S + + +++ ++ N Sbjct: 336 LNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSSVATLPKQVADHYDN 395 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQA 464 I++AL V S V + + + PW+L +P A TVL+V +E +R LLQ Sbjct: 396 FQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVFGTLLQP 455 Query: 465 FVPKLANKIFDILFVADENR 484 P LA+K+ L V+ R Sbjct: 456 VTPSLADKLLSRLGVSASER 475 >gi|71992781|ref|NP_740948.2| hypothetical protein Y105E8A.20 [Caenorhabditis elegans] gi|31442025|emb|CAD21672.2| C. elegans protein Y105E8A.20a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 406 Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 139/401 (34%), Positives = 213/401 (53%), Gaps = 44/401 (10%) Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYF 166 KI D G IYK YSG+YS+ DE + +++V K GA+ + PV+W+EEE Y Sbjct: 2 KIQDNGYIYKSTYSGYYSITDECFIPEEDVVKKIVEGGAEKLTLKSNGTPVEWIEEENYM 61 Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSR--------KTFD 215 FRLS +++K+ + I R N V+ + L L +S Sbjct: 62 FRLSEFREKVAEW----------INRENIVVHPSKYKSLALTSLEMSEDLSISRSRSRLS 111 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275 WGI +P+DP +YVW+DAL NYLT TG+ P+ WP VIGKDI +FH YW Sbjct: 112 WGIPVPNDPTQTIYVWLDALVNYLTVTGF---PNAQSV--WPPTCQVIGKDITKFHLYYW 166 Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 PAFL++A L LP+KVF HG L K+SKSLGNV++P E I + + LRYFL++ Sbjct: 167 PAFLMAAGLSLPQKVFIHGHWLIDNVKMSKSLGNVVNPSEAITKFTAEGLRYFLLKHGNP 226 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTESDESILSVC 394 D ++ + + +N+DL N +GNL++RS V I K +GM P + + I Sbjct: 227 SYDCSFNWNSCLQTINSDLVNNVGNLLNRSTVEKINK--EGMYPK-MEIEDIEAEIRENA 283 Query: 395 SRVLQEIRENMQNQL-------IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 ++++ + E+ +N + + + ++ + E +R F + +PW K+ + R ++ Sbjct: 284 KKLMEMVEESRENCVDLYDEMSYFKIIENLMLTMKEANRLFQSSQPW--KEIDEKRLKSL 341 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488 L+VT + IR + ILLQ PK+A + L V R ++ Sbjct: 342 LFVTYDTIRVVTILLQPITPKMAEFCLNRLGVPKNERNLEN 382 >gi|71034183|ref|XP_766733.1| methionyl-tRNA synthetase [Theileria parva strain Muguga] gi|68353690|gb|EAN34450.1| methionyl-tRNA synthetase, putative [Theileria parva] Length = 563 Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 142/469 (30%), Positives = 236/469 (50%), Gaps = 18/469 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K I+T + Y N PH+GHAY ++ +DVL RF L G D GTDEHG KI A N Sbjct: 71 NKYLITTPLFYLNGPPHLGHAYTLVSSDVLKRFLILSGHDCKLLAGTDEHGSKIKTTAAN 130 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G + K +V F + DI+ + + T+E H + ++ + G IY+G + Sbjct: 131 FGYSPKEYVISMRNQFFKLYKAYDITPEIVVHTSENEHKSKVKRVFDNFLESGHIYRGLH 190 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 G++S +++ YY + ++ G ++ V ++E YFF+L ++ KL+ +++ Sbjct: 191 RGYFSPKEDLYYTESKLINGKSPLGFD-----VTLVDEPAYFFKLDIWKRKLVEFFKD-S 244 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244 E ILP NEV ++S + D++++R DWGI I + +YVW DAL YLT Sbjct: 245 EVILPQHSLNEVRKLLQSEINDIAITRSNCDWGIPITNSGNETVYVWFDALLGYLTHLHS 304 Query: 245 LDNPDGSKAKFWPAD-LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 + S + +HVIGKDIL FH I WPA L++ L + + HG++L+KGEKI Sbjct: 305 FPPLEQSNSNLNGLKIIHVIGKDILTFHTILWPAILMALKLDIKLRFLVHGWLLNKGEKI 364 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSL N I P+ V D R+ L+ D +D + L N N Sbjct: 365 SKSLNNSISPLNT--SVPSDVSRFALMNLGDFSYDFEFDPSMFDNALKT-LRNKFANTFY 421 Query: 364 RSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 R S++ + D + P + D +L ++ +EIR ++Q+ + R + ++ + S Sbjct: 422 RVTSILQMNKVDTVQP-----CDCDHKLLEKFNKYSEEIRNSVQSFRLDRYIQILVEMSS 476 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 EV+++ + + W + + ++ ++ ++ ++I L PKLAN Sbjct: 477 EVNKFIELTQFWTMSSQSELLNTS--WICCTLLLYISIYLAPITPKLAN 523 >gi|240281239|gb|EER44742.1| methionine-tRNA synthetase [Ajellomyces capsulatus H143] Length = 325 Score = 229 bits (585), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 118/276 (42%), Positives = 165/276 (59%), Gaps = 11/276 (3%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKA 61 +++ Y++T I Y NA PH+GH Y MI+ADVL R+ L G D TGTDEHG KI +A Sbjct: 52 DKKPFYVTTPIFYVNAAPHVGHLYTMILADVLKRWQILLGNTDAKLLTGTDEHGLKIQQA 111 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A G+T + DQN + F+++A ++ YD FIRTT+ H + R W ++ +G IY Sbjct: 112 AAALGMTPQALCDQNCKTFQNLARKGNVGYDHFIRTTDAEHKEAVRYFWDMLNHRGYIYT 171 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDK 175 + GWYS+ DEA+Y V D VQW EE Y FRLSA+Q+ Sbjct: 172 SKHEGWYSVSDEAFYPPSAVQPTLDPSTGRKIITSIETGKEVQWASEENYHFRLSAFQEP 231 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233 LL ++ +P+F+ P + ++S V SGL+DLS+SR WGI +P D ++YVW+D Sbjct: 232 LLEHFRKNPDFVTPRNYMDGIVSAVTSGLQDLSISRPASRLKWGIPVPYDESQVIYVWLD 291 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269 AL NY+T GY P G+++ WPAD+ V+GKDILR Sbjct: 292 ALVNYITYAGY-PFPPGAQS-IWPADVQVVGKDILR 325 >gi|302662778|ref|XP_003023040.1| hypothetical protein TRV_02862 [Trichophyton verrucosum HKI 0517] gi|291187016|gb|EFE42422.1| hypothetical protein TRV_02862 [Trichophyton verrucosum HKI 0517] Length = 474 Score = 229 bits (584), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 125/342 (36%), Positives = 187/342 (54%), Gaps = 16/342 (4%) Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--F 214 V++ +E Y F+LSA+QD+LL +Y +P+FI P + ++ V SGL+DLS+SR Sbjct: 94 VKFSQETNYHFKLSAFQDRLLEHYRKNPKFIQPKVYMDSIVQNVASGLQDLSISRPVDRL 153 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274 WGI +P D +YVW+DAL NY+T GY P + WPAD+HV+GKDI RFH IY Sbjct: 154 SWGIPVPGDTTQTIYVWLDALVNYITYAGYPFTPGREQESIWPADVHVVGKDITRFHCIY 213 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPAFL++ +LPLP+ + +H K+SKS GNV++P+ + GVD +R++L Sbjct: 214 WPAFLMALDLPLPRTILTHAHWTMNHSKMSKSTGNVVNPMFAMARYGVDPMRFYLAMNGG 273 Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS----MILKDYDGMIPTPGAFTESDESI 390 D YD + + L G+GNL SR + + + M G+ D S Sbjct: 274 LASDTDYDNSYIVRDYKNILQGGLGNLCSRVMRGKGWNVRESVVKMTNGQGSRRAKDPSE 333 Query: 391 ---LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNP--- 441 + +V + M RAL +++ ++ + +RY + PW L K T+P Sbjct: 334 IEHMEFLEKVPGLVSNQMNELNPRRALEEIVKIIDQTNRYVQSTGPWNLAKEAGTDPTAH 393 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 D+ V+Y E +R ILLQ F+P+ A K+ D+L V +EN Sbjct: 394 DQLVGVIYNATESLRIAGILLQPFMPEKAKKLLDMLGV-EEN 434 >gi|70941249|ref|XP_740936.1| methionine--tRNA ligase [Plasmodium chabaudi chabaudi] gi|56518992|emb|CAH87109.1| methionine--tRNA ligase, putative [Plasmodium chabaudi chabaudi] Length = 504 Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 118/311 (37%), Positives = 191/311 (61%), Gaps = 7/311 (2%) Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228 +S YQD+LL + +P++I P + RNE++ +K L+DLS SR F WGI +P+DP+++M Sbjct: 1 MSKYQDRLLQHIHDNPDYIQPEKNRNEILQRLKEPLEDLSCSRTKFSWGIPVPNDPKHVM 60 Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK 288 YVW+DAL NY + +++ D K K+WP D+ +IGKDI+ FHA+ +P L+S N+ LPK Sbjct: 61 YVWMDALINYYSNC-FIN--DQEKMKYWPPDIQIIGKDIVWFHAVIFPTILMSVNIELPK 117 Query: 289 KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 VFSHGF+L G+K+SKSL NVIDP E+IE G DA R+ +V+E G D +D D L Sbjct: 118 CVFSHGFVLASDGKKMSKSLKNVIDPKEIIEAYGSDAFRFHVVKESKTGYDMRFDIDNLV 177 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 N+DLA+ IGNLV R++S+ + I P + + D + + I M+N Sbjct: 178 DMCNSDLADTIGNLVQRTLSLCFLSNNAKI--PPLYDDIDIELPFCMLHFINRIEYYMKN 235 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFV 466 +H+ + +++ +++++ PW+ K+ + ++ ++ + +E I +A + V Sbjct: 236 FRVHKFCEKTVNVCKDLNKFLTDLAPWKYKQESEQNKKLHIIRLMLESIYFIAHYIDIVV 295 Query: 467 PKLANKIFDIL 477 P +A++IF L Sbjct: 296 PTIASQIFSQL 306 >gi|325959090|ref|YP_004290556.1| methionyl-tRNA synthetase [Methanobacterium sp. AL-21] gi|325330522|gb|ADZ09584.1| Methionyl-tRNA synthetase [Methanobacterium sp. AL-21] Length = 658 Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 152/502 (30%), Positives = 250/502 (49%), Gaps = 33/502 (6%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K+ IS+A+ Y N H+GH I AD+ AR++R+ G DVLF TDEHG IA A+ Sbjct: 3 KVLISSALPYANGPCHLGHLRSTYIPADIYARYNRMKGNDVLFVCATDEHGTPIAVKAEK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G K + + + +IS D F RTT+ +H++ + + K+ +KG IY+ Sbjct: 63 EGKPPKEVAGRYHEMIKTDLESCNISLDSFTRTTDPKHYEISQNFFLKLYEKGYIYEKVI 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNA--QH-NPVQWMEEEG--------- 164 Y + D V +GA G + + +H P Q +E + Sbjct: 123 KQPYCEECGRFLPDRYVEGTCPFCETEGARGDHCESCGRHLEPTQLLEPQCQICGSTPEI 182 Query: 165 -----YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 YFF+LS +QD+L + E + E LP RN + ++K GLKD L+R +WGI Sbjct: 183 RESKQYFFKLSHFQDQLQEWIEGNHE--LPPNVRNYALQWLKEGLKDWILTRD-MEWGIP 239 Query: 220 IPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW-PADLHVIGKDILRFHAIYW 275 +P + I+YVW +A Y+++ G ++W LH IGKDI+ H+I+W Sbjct: 240 VPLEGAEGKIIYVWGEAFLGYISSAAQWSEKTGKPWEEYWNDRPLHFIGKDIIYHHSIFW 299 Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 PA L++ LP V + ++ +G K+S S VI + I+ D LRY+LV Sbjct: 300 PALLMAYGCKLPYTVIAGEYLSLEGSKMSTSKNWVIWVSDFIKNFDSDILRYYLVANAPL 359 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 KD + D ++RVN +LA+ IGN + R+ + + +DG +P PG F + D + Sbjct: 360 SKDTDFSWDDFQRRVNDELADVIGNFLHRTFTFTNRFFDGKLPAPGEFDDYDREFETKIK 419 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 + + + ++ + ++I L ++YF+ ++PW+ KT+ A+ LY+ ++ Sbjct: 420 ALPKLVGGLIEEFKFREGMMEIIKLSKYGNKYFNDKEPWKAVKTDKAGAANCLYLANQLA 479 Query: 456 RQLAILLQAFVPKLANKIFDIL 477 + LA+ L ++P +IF L Sbjct: 480 KTLAVSLTPYLPVKTLEIFKTL 501 >gi|312069747|ref|XP_003137826.1| methionyl-tRNA synthetase [Loa loa] gi|307767008|gb|EFO26242.1| methionyl-tRNA synthetase [Loa loa] Length = 500 Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 156/492 (31%), Positives = 232/492 (47%), Gaps = 81/492 (16%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL-----DGLDVLFTTGTDEHGQKI 58 R K +I+T I Y N PHIGH Y ++AD R+ L D D LFTTGTDEHG KI Sbjct: 14 RLKHFITTPIFYANGPPHIGHLYTALLADASNRWRLLRDGNADLDDSLFTTGTDEHGLKI 73 Query: 59 AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 + A AG + + D S F+D+ I +DFIRTTE RH + +++ +G Sbjct: 74 QQTATAAGCDPQSYCDNMSDKFKDLFCAFGIQPNDFIRTTETRHKE------EELDKRGQ 127 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADG----------QYYNAQHN--------PVQWM 160 I +G + GWYS DE +Y DEV K ++ Y N V+W+ Sbjct: 128 IQQGKHEGWYSTTDECFYASDEVEKLSEQNSMIKMNRYVHYIVEDKNLVSKITGSVVEWV 187 Query: 161 EEEGYFFRLSAYQDKLLSYYES----HPEFILPIERRNEVISFVKSGLKDLSLS--RKTF 214 +EE Y F LS Y K+ S+ S P+ P + I ++LS+S RK Sbjct: 188 QEENYVFPLSKYLGKVRSWLSSCDIIRPKVYFPEAFQQASIE------RNLSMSRDRKRV 241 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274 WGI +P+D +YVW DAL +YLT + + Sbjct: 242 TWGIAVPNDESQTIYVWFDALISYLTVS------------------------------VI 271 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPAFL++ +LPLPK++F H L G K+SKS+GNV+DP + + + LRYFL+R+ Sbjct: 272 WPAFLIALDLPLPKRIFVHSHWLVNGAKMSKSVGNVVDPFIASKSLSEEGLRYFLLRQGT 331 Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL---KDYDGMIPTP--GAFTESDES 389 D + +N DL N +GNL+ RS L + Y P + E E Sbjct: 332 PQNDANFTMLKAINVINTDLINNVGNLLQRSTIEKLNPSQRYPAFYPDSFHNSLLELGEP 391 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKTNPDRASTVL 448 ++ + + + E +I++AL ++ ++ + + +F +PW EL DR V Sbjct: 392 LVHSVNSLAELYEEQFDELMIYKALELLMEVMRQANGFFQFYEPWNELD----DRKPAVP 447 Query: 449 YVTVEVIRQLAI 460 + ++ +L I Sbjct: 448 HYADHLLNRLGI 459 >gi|70949093|ref|XP_743989.1| tRNA ligase [Plasmodium chabaudi chabaudi] gi|56523747|emb|CAH77597.1| tRNA ligase, putative [Plasmodium chabaudi chabaudi] Length = 559 Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 141/526 (26%), Positives = 253/526 (48%), Gaps = 67/526 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL----DGLDVLFTTGTDEHGQKIAKAA 62 L I+T I Y N +PHIGHAY ++ DV+ RF ++ + ++F +G DEHG KI Sbjct: 1 LVITTPIYYGNDKPHIGHAYCNVLVDVIYRFEKIKDNENKKKIIFFSGMDEHGLKIDSKT 60 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + + +++ S ++ M +L + + F RT+ H + +WK + KG IYK Sbjct: 61 KKLNMDKTNYLNNISEYYKKMNKMLSVDINLFYRTSNVFHKTFVQHVWKYLLSKGYIYKD 120 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G+YS+ +E Y +D EV K + A + + EE YFF ++ ++D L+++Y++ Sbjct: 121 VYKGYYSISEERYLSDREVEKMKSEENNTAANRIIYIEEENSYFFDVNKFKDFLINFYKT 180 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 + I P + E+ +++ K++ +SR +WGIKIP + + +YVW +AL +Y+++ Sbjct: 181 NESIIFPSYLKKEIEYHIENDFKNVCISRYNTEWGIKIPGEEKGTIYVWFEALLSYISSI 240 Query: 243 --------------------------------------------------GYLDNPDGSK 252 YL+NP Sbjct: 241 LYVIKKYESSKISSTLPQSKTQEEDNIVCSYEDVLSLVNSCTSVDSRENDAYLENPIMDD 300 Query: 253 A--------KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 K W + VIGKDIL+FH I + L S + +P+ + HG I + KIS Sbjct: 301 KICSRKLFEKLWNPYIQVIGKDILKFHGILYICLLNSLGIKIPEHILCHGLIKIENIKIS 360 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSL N++ P ++E+ D +R + + +D + + L + L N +GNL+ R Sbjct: 361 KSLNNIVSPFTLLEKYDKDVIRLYFIGSGNIYEDKNFKESNL-ETFELFLRNSVGNLLYR 419 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 +VS+ +++ +I F + + L ++ ENM+ L+ L +++ LV ++ Sbjct: 420 TVSLCIENNYKIIKKHYLFNFTILNEFKSDKTNLIKLFENMEYPLL---LEKLMILVKKI 476 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 ++YF +PW K + + ++Y T E I+ +I + F+P ++ Sbjct: 477 NKYFVHNEPWN-KLNDSKNFNLIIYETFECIKFFSIFMYPFIPNIS 521 >gi|167933048|ref|ZP_02520135.1| methionyl-tRNA synthetase [candidate division TM7 single-cell isolate TM7b] Length = 336 Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 124/316 (39%), Positives = 182/316 (57%), Gaps = 20/316 (6%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPD 222 Y+FRL+ + ++ + E++ I P R+ EV++ + G++DLS+SR K WG+ +P Sbjct: 2 YYFRLTHFVPQIRNAIENNEIKIFPESRKKEVLNLLNDGIEDLSVSRPRKNLAWGVSVPG 61 Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 D ++YVWIDAL+NY+T GY D D S +WPA++ V+GKDILRFHAI WPA L++ Sbjct: 62 DDNQVIYVWIDALSNYITVLGYPD--DESWRDYWPANVQVVGKDILRFHAIIWPAILMAL 119 Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 LPLPK++ HG I G+K+SKSLGNV+ P EVI+ G DA RY+ R+I DG + Sbjct: 120 GLPLPKQILVHGHIGFDGKKMSKSLGNVVSPNEVIDTYGADAFRYYFRRQIPTLDDGDFT 179 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402 + +K N +L N +GNLV R M+L+ G++ G + I Q R Sbjct: 180 WEKFEKAYNNELGNDLGNLVQRVAKMVLRYQAGVV---GELNRGEHDI--------QLYR 228 Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST-----VLYVTVEVIRQ 457 + M A+ QV + ++Y + KPWE+ K D ST +L V I Q Sbjct: 229 DAMDEMRFSDAIDQVWGKIRATNQYLEQVKPWEVAKNKDDPESTEHLSDILQDAVGSIMQ 288 Query: 458 LAILLQAFVPKLANKI 473 +A LL F+P+ ++KI Sbjct: 289 IADLLVPFLPEASSKI 304 >gi|57640984|ref|YP_183462.1| methionyl-tRNA synthetase [Thermococcus kodakarensis KOD1] gi|68749280|sp|Q5JDZ7|SYM_PYRKO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|57159308|dbj|BAD85238.1| methionyl-tRNA synthetase [Thermococcus kodakarensis KOD1] Length = 741 Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 155/549 (28%), Positives = 266/549 (48%), Gaps = 56/549 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++A+ Y N H GH A + AD+ R+ RL G +VLF GTDEHG I A G Sbjct: 6 VTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEEVLFICGTDEHGTPITFRALKEGR 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + VD+ + + + IS+D F RT H+ + + K + G + K Sbjct: 66 SPREIVDEFHEHIKTTFERAKISFDFFGRTELPVHYRLSQEFFLKALENGHLVKKVTKQA 125 Query: 128 YSLRDEAYYNDDEV-----YKGADGQY--------------------YNAQHNPVQWMEE 162 Y D+ + D V Y GA+ Q N NP+ + + Sbjct: 126 YCEHDKMFLPDRYVIGTCPYCGAENQRGDQCEVCGHPLTPEILINPRCNICGNPITFKDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222 Y+ R+ ++++L + ES + + RN V+ ++ GL++ +++R DWGI +P Sbjct: 186 AHYYIRMQDFEERLKKWVESQEHWKPNV--RNTVLGWINEGLEERAITR-DLDWGIPVPL 242 Query: 223 DPQ----YIMYVWIDALTNYLTTTGYLDNPDGSK---AKFW------PADLHVIGKDILR 269 D + ++YVW +A Y++ T +G + KFW +H IGKD + Sbjct: 243 DDEDVKGKVLYVWFEAPIGYISITIEHLKREGKENEWKKFWLNLDGETKVIHFIGKDNIP 302 Query: 270 FHAIYWPAFLLS----------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 FHAI+WPAFL++ A LP + ++ ++ +G+K S S I E ++ Sbjct: 303 FHAIFWPAFLMAYGKYRDEEVEAEWNLPYDIPANEYLNLEGKKFSTSRNWAIWVHEFLDV 362 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 D LRY+L + +D + + KK++N +L N +GN V R+++ + + +DG++P Sbjct: 363 WPADYLRYYLTAIMPETRDSDFSFEDFKKKINEELVNNLGNFVHRAMTFVNRYFDGVVPE 422 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 G + D L + +E E + N AL +V+ L +RYFD QKPW+ K Sbjct: 423 RGELNDLDRQALEEIEKAFKETGELISNYRFKDALKRVMELAIFGNRYFDYQKPWKTAKE 482 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-CFQSL--DQRLKPG 496 N +R +T + V++++++ L ILL+ F+P + KI+ +L + + + F+ L R++ Sbjct: 483 NRERTATTVNVSLQIVKALGILLEPFLPDASEKIWHLLNLEEVKKWSFEELPAGHRVRKA 542 Query: 497 F-MLHKTFD 504 F M K D Sbjct: 543 FPMFRKVTD 551 >gi|312136830|ref|YP_004004167.1| methionyl-tRNA synthetase [Methanothermus fervidus DSM 2088] gi|311224549|gb|ADP77405.1| methionyl-tRNA synthetase [Methanothermus fervidus DSM 2088] Length = 550 Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 144/537 (26%), Positives = 267/537 (49%), Gaps = 41/537 (7%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K++++ A+ Y N H+GH I AD+ +R+ R+ G DVLF TDEHG IA A+ Sbjct: 2 KIFVTCALPYANGPLHLGHLRSTYIPADIYSRYQRMVGNDVLFVCATDEHGTPIAVKAEK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G + + + D DIS+D+F RT+ H+ + + K+ KG IY+ Sbjct: 62 EGKDPLEITTKYYKKIKSDLDKCDISFDNFSRTSSDIHYKVAQNFFLKLYKKGYIYEKEI 121 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME--------------- 161 +Y + + D V +GA G + ++ +E Sbjct: 122 KQFYCTNCKRFLPDRYVEGICPYCDSEGARGDHCEVCGRHLEVLELIKPRCILCSGEPEI 181 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + YFF+LS +Q KL + E++ E LP +N + ++K GL D ++R WG+ Sbjct: 182 RKSKHYFFKLSKFQKKLKEWVENNEE--LPSNVKNYTLEWLKEGLNDWIMTR-DMKWGVP 238 Query: 220 IP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD-LHVIGKDILRFHAIYW 275 +P D ++YVW +A Y+++ + K +W + +H IGKDI+ H I+W Sbjct: 239 VPLEDAEGKVIYVWGEAFLGYISSAIEWSKKNKKDWKEYWDSGAIHFIGKDIIYHHTIFW 298 Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 PA L++ LP+ V + ++ +G+K+S S V+ + ++ D LRY+L Sbjct: 299 PAMLMAYGCKLPRTVIAGEYLSLEGKKMSTSKNWVVWVSDFLKRFDSDLLRYYLTINAPL 358 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD---ESILS 392 +D + D ++RVN +LA+ +GN + R++ + +D IP P F E D E + Sbjct: 359 TRDTDFSWDDFQRRVNDELADILGNFIHRALMFTYRFFDAKIPEPSEFGEKDIEFEERIK 418 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 +++ EN + L +++ L + ++YF+ Q+PW+ K N +A+T +Y+ Sbjct: 419 ESPKIVGNFIENFK---FRDGLIEIMKLARDGNKYFNDQEPWKTFKENKYKAATCIYLCD 475 Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 + ++ + +L++ ++PK ++ I +L + D R ++ ++ ++P ++K P+F + Sbjct: 476 QAVKAIGVLIKPYLPKTSSNILSMLNLDDNVR-WEDANEFIEPNHKINKP-KPLFSK 530 >gi|194376120|dbj|BAG62819.1| unnamed protein product [Homo sapiens] Length = 520 Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 155/507 (30%), Positives = 229/507 (45%), Gaps = 95/507 (18%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAA 62 + Y +T I Y NA PHIGH Y ++AD L R RL G F+TGTDEHG KI +AA Sbjct: 44 RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 103 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ D+ S F+ + IS W K + Sbjct: 104 ATAGLAPTELCDRVSEQFQQLFQEAGIS-------------------WTKEEN------- 137 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSY 179 Y R + + + + Q + H +QW++EE D +S Sbjct: 138 -----YIFRLSQFRKPLQRWLRGNPQAITPEPFHHVVLQWLDEE--------LPDLSVSR 184 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 SH + +P+ P D +YVW+DAL NYL Sbjct: 185 RSSHLHWGIPV------------------------------PGDDSQTIYVWLDALVNYL 214 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T GY P+ +WPA H+IGKDIL+FHAIYWPAFLL A + P+++ H Sbjct: 215 TVIGY---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRICVHSHWTVC 271 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G+K+SKSLGNV+DP + VD RYFL+R+ D Y + + K +N++LA+ +G Sbjct: 272 GQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELADALG 331 Query: 360 NLVSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILSVCSRVLQEIRENM 405 L++R + + + Y T PG S D +++S + + +++ ++ Sbjct: 332 GLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQVADHY 391 Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILL 462 N I++AL V S V + + + PW+L +P A TVL+V +E +R LL Sbjct: 392 DNFRIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVFGTLL 451 Query: 463 QAFVPKLANKIFDILFVADENRCFQSL 489 Q P LA+K+ L V+ R L Sbjct: 452 QPVTPSLADKLLSRLGVSASERSLGEL 478 >gi|325990111|ref|YP_004249810.1| methionyl-tRNA synthetase [Mycoplasma suis KI3806] gi|323575196|emb|CBZ40861.1| Methionyl-tRNA synthetase [Mycoplasma suis] Length = 507 Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 141/484 (29%), Positives = 251/484 (51%), Gaps = 38/484 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ + I+T + Y + PHIGHAY +II D++ ++H L + G DEHG+KI A Sbjct: 2 KKDVLITTPLFYSSGDPHIGHAYTLIIGDLIKKYHELVNIKANLLAGVDEHGEKILTKAT 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + FV++NS F++++ L+IS D F+RTT H + + ++K++ + G IYK Sbjct: 62 EVGLTVEEFVEKNSSKFKNLSSTLEISPDYFVRTTNDFHKEYAKKVFKELLELGKIYKSS 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW------MEEEGYFFRLSAYQDKLL 177 +SG+ + E Y++ +YY +Q N + EE+ YFF+++ + L Sbjct: 122 WSGYKCINCETNYSN---------KYY-SQKNKCELGHELIKKEEDTYFFKITEFVSWLK 171 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237 +Y ++ I P ++ L+DLS++R DWGIK+ D P++ +YVW +AL Sbjct: 172 EHY-ANKNIIFPARYLKDLHEGFFPSLEDLSITRSKLDWGIKLDDSPEFTLYVWFEALLG 230 Query: 238 YLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 Y++T D + K W + +IGK+I RFH+IY+PA L L P K+ Sbjct: 231 YIST-------DSVREKHWLTSSDTKIIQIIGKEIFRFHSIYYPAILSLKKLKTPDKLLV 283 Query: 293 HGFILHKGEKISKSLGN--VIDPI-EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 HG++L+ KISKS N I P+ +IE+ +++++++ + + +D + +D LK+ Sbjct: 284 HGWLLNDNRKISKSDPNSKAIPPLNSLIEQYNLESIKWYFLS-LNWEEDHPFSEDLLKQS 342 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQ 408 N L N +GNL++R +I K F E + + + + L ++ + + N Sbjct: 343 YNKYLVNLLGNLINRFKGIISKQEYITSSINSEFKNEQIKKEIELSNEFLTKLTDLVINI 402 Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468 I +++ L++ + + +PW+L K + D + V + RQL ++ P Sbjct: 403 KIPEIISRAKQLLNSANFLLNHLEPWKLPKDSQDYKE----INVFLYRQLILISFLLSPI 458 Query: 469 LANK 472 K Sbjct: 459 FTEK 462 >gi|325973668|ref|YP_004250732.1| methionyl-tRNA synthetase [Mycoplasma suis str. Illinois] gi|323652270|gb|ADX98352.1| methionyl-tRNA synthetase [Mycoplasma suis str. Illinois] Length = 507 Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 141/484 (29%), Positives = 251/484 (51%), Gaps = 38/484 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ + I+T + Y + PHIGHAY +II D++ ++H L + G DEHG+KI A Sbjct: 2 KKDVLITTPLFYSSGDPHIGHAYTLIIGDLIKKYHELVNIKANLLAGVDEHGEKILTKAT 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + FV+QNS F++++ L+IS D F+RTT H + + ++K++ + G IYK Sbjct: 62 EVGLTVEEFVEQNSSKFKNLSSTLEISPDYFVRTTNDFHKEYAKKVFKELLELGKIYKSS 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW------MEEEGYFFRLSAYQDKLL 177 +SG+ + E Y++ +YY +Q N + EE+ YFF+++ + L Sbjct: 122 WSGYKCINCETNYSN---------KYY-SQKNKCELGHELIKKEEDTYFFKITEFVSWLK 171 Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237 +Y+ + + I P ++ L+DLS++R DWGIK+ D P++ +YVW +AL Sbjct: 172 EHYK-NKDIIFPARYLKDLHEGFFPSLEDLSITRSKLDWGIKLDDSPEFTLYVWFEALLG 230 Query: 238 YLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 Y++T D + K W + +IGK+I RFH+IY PA L L P K+ Sbjct: 231 YIST-------DSVREKHWLTSSDTKIIQIIGKEIFRFHSIYCPAILSLKKLKTPDKLLV 283 Query: 293 HGFILHKGEKISKSLGN--VIDPI-EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 HG++L+ KISKS N I P+ +I++ +++++++ + + +D + +D LK+ Sbjct: 284 HGWLLNDNRKISKSDPNSKAIPPLNSLIKQYNLESIKWYFLS-LNWEEDHPFSEDLLKQS 342 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQ 408 N L N +GNL++R +I K F E + + + + L + + + N Sbjct: 343 YNKYLVNLLGNLINRFKGIISKQEYITSSINSEFKNEQIKKEVELSNEFLTKFTDLVINI 402 Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468 I +++ L++ + + + +PW+L K + D + V + RQL ++ P Sbjct: 403 KIPEIISRAKQLLNSANFFLNHLEPWKLPKDSQDYKE----INVFLYRQLILISFLLSPI 458 Query: 469 LANK 472 K Sbjct: 459 FTEK 462 >gi|296205178|ref|XP_002749648.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial isoform 2 [Callithrix jacchus] Length = 522 Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 154/507 (30%), Positives = 230/507 (45%), Gaps = 93/507 (18%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAA 62 + Y +T I Y NA PHIGH Y ++AD L R RL F+TGTDEHG KI +AA Sbjct: 44 RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRSPSTAATRFSTGTDEHGLKIQQAA 103 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 AG+ D+ S F+ + IS+ W K + Sbjct: 104 ATAGLAPTELCDRISEQFQQLFQEAGISFS-----------------WTKEEN------- 139 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSY 179 Y R + + + + Q + H +QW++EE D +S Sbjct: 140 -----YIFRLSQFREPLQRWLRGNPQAITPEPFHHVVLQWLDEE--------LPDLSVSR 186 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 SH + +P +P D +YVW+DAL NYL Sbjct: 187 RSSHLHWGIP------------------------------VPGDDSQTIYVWLDALVNYL 216 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299 T GY P+ +WPA H+IGKDIL+FHAIYWPAFLL A + P++++ H Sbjct: 217 TVIGY---PNAEFKFWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSHWTVC 273 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G+K+SKSLGNV+DP + VD RYFL+R+ D Y + + K +N++LA+ +G Sbjct: 274 GQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELADALG 333 Query: 360 NLVSRSVSMILKDYD-------GMIPT-PGAFTES------DESILSVCSRVLQEIRENM 405 L++R + + + P+ PG S D +++S + + + + ++ Sbjct: 334 GLLNRCTAKRINPSETYPAFCTNCFPSEPGLMGPSVRAQAEDYALVSAVATLPKRVADHY 393 Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILL 462 N I++AL V S V + + + PW+L +P A STVL+V +E +R LL Sbjct: 394 DNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWDSPVDAPWLSTVLHVALECLRVFGTLL 453 Query: 463 QAFVPKLANKIFDILFVADENRCFQSL 489 Q P LA+K+ L V+ R L Sbjct: 454 QPVTPSLADKLLSRLGVSVSERSLGKL 480 >gi|288560216|ref|YP_003423702.1| methionyl-tRNA synthetase MetG [Methanobrevibacter ruminantium M1] gi|288542926|gb|ADC46810.1| methionyl-tRNA synthetase MetG [Methanobrevibacter ruminantium M1] Length = 691 Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 146/511 (28%), Positives = 250/511 (48%), Gaps = 40/511 (7%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K++IS A+ Y N H+GH I AD+ AR++R+ G DVL TDEHG IA A Sbjct: 3 KIFISCALPYANGPCHLGHLRSTYIPADIYARYNRMAGNDVLMVCATDEHGTPIAVKADA 62 Query: 65 AGV----TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 G K + D +R+ + DIS D+F RT+++ H+ + + + +KG IY Sbjct: 63 EGKKPIEVAKRYHDMIARDI----ESCDISLDNFARTSDELHYKISQDFFLYLYEKGLIY 118 Query: 121 KGCYSGWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWMEEEG------ 164 + Y E + D V +G + P + +E Sbjct: 119 EEAIQQLYCENCEKFLPDRYVEGICPVCGAEARGDHCESCGRALEPTELLEPHCLTCGNT 178 Query: 165 --------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 YFF+LS +Q++L Y ++ LP RN +++K GL+D ++R W Sbjct: 179 PVIRDSTQYFFKLSHFQNQLEEYITTNE--YLPPNVRNYAQNWLKEGLEDWIMTRD-MKW 235 Query: 217 GIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD-LHVIGKDILRFHA 272 GI +P + ++YVW +A Y+++ G + +W +H IGKDI+ H+ Sbjct: 236 GIPVPLEGAKGKVIYVWGEAFIGYISSAAAWSRRTGIPWEDYWDGHVVHFIGKDIIYHHS 295 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L+ + LP +F+ F+ +G K+S S V+ + +++ D LR++L Sbjct: 296 LFWPAMLMGHDCKLPDDIFAGEFLSLEGRKMSTSKNWVVWVSDFVKDFESDLLRFYLTIS 355 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 KD + D +RVN +LA+ IGN + R+ + K +DG +P +E D + Sbjct: 356 APLNKDTDFSWDDFGRRVNDELADIIGNFLHRTFTFTHKFFDGKVPEYANPSEEDLEFEA 415 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + ++ E + + L +++ ++YF+ Q+PW+ K NP +AS LY++ Sbjct: 416 EIKELPAKVGELISSMKFREGLVEILKTAKSANKYFNDQEPWKAVKENPQKASNCLYLSN 475 Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADEN 483 + + LAILL+ ++P A+ I DI+ ++ EN Sbjct: 476 QFCKSLAILLKPYIPNKADAICDIINISKEN 506 >gi|154279182|ref|XP_001540404.1| hypothetical protein HCAG_04244 [Ajellomyces capsulatus NAm1] gi|150412347|gb|EDN07734.1| hypothetical protein HCAG_04244 [Ajellomyces capsulatus NAm1] Length = 324 Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 117/276 (42%), Positives = 162/276 (58%), Gaps = 16/276 (5%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKA 61 +++ Y++T I Y NA PH+GH Y MI+ADVL R+ L G D TGTDEHG KI +A Sbjct: 56 DKKPFYVTTPIFYVNAAPHVGHLYTMILADVLKRWQILLGNTDAKLLTGTDEHGLKIQQA 115 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A G+T + DQN + F+++A ++ YD FIRTT+ H + ++ +G IY Sbjct: 116 AAALGMTPQALCDQNCKTFQNLARKGNVGYDHFIRTTDAEHKEA-----DMLNHRGYIYT 170 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDK 175 + GWYS+ DEA+Y V D VQW EE Y FRLS +Q+ Sbjct: 171 SKHEGWYSVSDEAFYPPSAVQPTLDPSTGRKIITSIETGKEVQWASEENYHFRLSTFQEP 230 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233 LL ++ +P FI P + ++S V SGL+DLS+SR WGI +P D ++YVW+D Sbjct: 231 LLEHFRKNPNFITPRNYMDGIVSAVTSGLQDLSISRPASRLKWGIPVPYDESQVIYVWLD 290 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269 AL NY+T GY P G+++ WPAD+HV+GKDILR Sbjct: 291 ALVNYITYAGY-PFPPGAQS-IWPADVHVVGKDILR 324 >gi|240103568|ref|YP_002959877.1| methionyl-tRNA synthetase [Thermococcus gammatolerans EJ3] gi|239911122|gb|ACS34013.1| Methionyl-tRNA synthetase (metG) [Thermococcus gammatolerans EJ3] Length = 739 Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 146/525 (27%), Positives = 253/525 (48%), Gaps = 53/525 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++A+ Y N H GH A + AD+ R+ RL G +VLF GTDEHG I A G Sbjct: 6 VTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEEVLFICGTDEHGTPITFRALKEGR 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + VD+ + + + IS+D F RT H+ + + K + G + K Sbjct: 66 SPREIVDEFHEHIKTTFERAKISFDYFGRTELPVHYRISQEFFLKALENGHLVKKVTKQA 125 Query: 128 YSLRDEAYYNDDEV-----YKGADGQY--------------------YNAQHNPVQWMEE 162 Y D+ + D V Y GA+ Q N NP+ + + Sbjct: 126 YCEHDKMFLPDRYVIGTCPYCGAENQRGDQCEVCGRPLTPEILINPRCNICGNPITFKDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222 Y+ ++ ++++L + ES P +N V+ ++ GL++ +++R DWGI +P Sbjct: 186 AHYYIKMQDFEERLKKWIESRP---WKPNVKNTVLGWINEGLEERAITR-DLDWGIPVPL 241 Query: 223 DPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW------PADLHVIGKDILR 269 D + ++YVW +A Y++ T G + KFW +H IGKD + Sbjct: 242 DDEDMRGKVLYVWFEAPIGYISITIEALKRAGKEKEWKKFWLNLEGETRVIHFIGKDNIP 301 Query: 270 FHAIYWPAFLLS----------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 FHAI+WPAFL++ A+ LP + ++ ++ +G+K S S I E ++ Sbjct: 302 FHAIFWPAFLMAYGKYKDEEVEADWNLPYDIPANEYLNLEGKKFSTSRNWAIWVHEFLDA 361 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 D LRY+L + +D + K ++N +L N +GN V R+++ + + +DG++P Sbjct: 362 FPADYLRYYLTAIMPETRDSDFSFADFKVKINEELVNNLGNFVHRALTFVNRYFDGIVPE 421 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 G E D+ R +E+ E + AL +V+ L +RYFD Q+PW+ KT Sbjct: 422 RGELNELDKQAFEEIERAFEEVGELISQYRFKDALRRVMELAIFGNRYFDHQRPWKTAKT 481 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + R +T + V++++++ L ILL+ F+P + KI+ +L + + R Sbjct: 482 DRKRTATTVNVSLQIVKALGILLEPFLPDASEKIWHLLNLEELKR 526 >gi|315927239|gb|EFV06585.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 249 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 109/252 (43%), Positives = 165/252 (65%), Gaps = 6/252 (2%) Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244 +P ++NE+I+FV++GLKDLS++R +FDWGIK+P +D ++I+YVW+DAL Y+++ + Sbjct: 1 MPKNKKNELINFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYVSSLDF 60 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304 + G AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+ +GEK+S Sbjct: 61 QN--KGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 118 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+ P EV++ G +A RYFL+RE+ G DG + ++ L R+NA+L+N GNL++R Sbjct: 119 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 178 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + M K G I G + L+ L E ++N +R L ++ +S Sbjct: 179 IIGMSTKYSQGNISKEGVLKFYNAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 237 Query: 425 DRYFDAQKPWEL 436 + +PW L Sbjct: 238 NLAISKYEPWSL 249 >gi|302501698|ref|XP_003012841.1| hypothetical protein ARB_01092 [Arthroderma benhamiae CBS 112371] gi|291176401|gb|EFE32201.1| hypothetical protein ARB_01092 [Arthroderma benhamiae CBS 112371] Length = 418 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 123/360 (34%), Positives = 186/360 (51%), Gaps = 34/360 (9%) Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--F 214 V++ +E Y F+LSA+QD+LL +Y +P+FI P + ++ V SGL+DLS+SR Sbjct: 19 VKFSQETNYHFKLSAFQDRLLEHYRKNPKFIQPKVYMDSIVQNVASGLQDLSISRPVDRL 78 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI------- 267 WGI +P D +YVW+DAL NY+T GY P + WPAD+HV+GKDI Sbjct: 79 SWGIPVPGDTTQTIYVWLDALVNYITYAGYPFTPGREQESIWPADVHVVGKDITRCAIRM 138 Query: 268 ------------LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315 RFH IYWPAFL++ +LPLP+ + +H K+SKS GNV++P+ Sbjct: 139 KAFNTHRYQLIPFRFHCIYWPAFLMALDLPLPRTILTHAHWTMNHSKMSKSTGNVVNPMF 198 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS----MILK 371 + GVD +R++L D YD + + L G+GNL SR + + + Sbjct: 199 AMARYGVDPMRFYLAMNGGLASDTDYDNSYIVRDYKNVLQGGLGNLCSRVMRGKGWNVRE 258 Query: 372 DYDGMIPTPGAFTESDESI---LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428 M G+ D S + +V + M RAL +++ ++ + +RY Sbjct: 259 SVVKMTNGQGSRRAKDPSEIEHMEFLEKVPGLVSNQMDELNPRRALEEIVKIIDQTNRYV 318 Query: 429 DAQKPWELKK---TNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + PW L K T+P D+ V+Y E +R ILLQ F+P+ A K+ D+L V ++ Sbjct: 319 QSTGPWNLAKEAGTDPTAHDQLVGVIYNATESLRIAGILLQPFMPEKAKKLLDMLGVEED 378 >gi|74186218|dbj|BAE42903.1| unnamed protein product [Mus musculus] Length = 394 Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 123/355 (34%), Positives = 189/355 (53%), Gaps = 24/355 (6%) Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213 +PV W +EE Y F+LS +++ L + ++P+ I P V+ +++ L DLS+SR++ Sbjct: 2 HPVSWTKEENYIFKLSQFREPLQRWLGNNPQAITPEPFHQAVLQWLEEELPDLSVSRRSS 61 Query: 214 -FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA 272 WGI +P D +YVW+DAL NYLT GY PD +WPA H+IGKDIL+FHA Sbjct: 62 HLHWGIPVPGDDSQTIYVWLDALVNYLTVVGY---PDADFKSWWPATSHIIGKDILKFHA 118 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 IYWPA LL A L P +++ H G+K+SKSLGNV+DP ++ VD RYFL+R+ Sbjct: 119 IYWPALLLGAGLRPPHRIYVHSHWTVSGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQ 178 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT------------- 379 D Y + + K ++++LA+ +G L++R + + G P+ Sbjct: 179 GVPNWDCDYYDEKVVKLLDSELADALGGLLNRCTAYRINP-SGTYPSFCAACFPSEPGLT 237 Query: 380 -PGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELK 437 P ++++ L L ++ N I++AL V S V + + + PW+L Sbjct: 238 GPSVRVQAEDYALVTAVATLPKLVAGYYNDFQIYKALEAVSSCVRQTNGFVQRHAPWKLN 297 Query: 438 KTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489 +P+ A TVL+V +E +R LLQ P LA+K+ L V+ R L Sbjct: 298 WESPEDAPWLGTVLHVALECLRVFGTLLQPVTPNLADKLLSRLGVSTTERGLGEL 352 >gi|313235831|emb|CBY19815.1| unnamed protein product [Oikopleura dioica] Length = 479 Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 138/389 (35%), Positives = 202/389 (51%), Gaps = 50/389 (12%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++ I Y + PHIGH + +I D R+++++ + F+ GTDEHGQKI ++A G Sbjct: 43 FVTCPIYYATSSPHIGHIHSSVIGDFYHRWNKINDVASKFSLGTDEHGQKIIRSAAQQGY 102 Query: 68 T-TKVFVDQNSRNFRDMADVLDIS---YDD--FIRTTEKRHHDTCRILWKKISDKGDI-- 119 ++ V+ S +R IS DD F+RTT HH + LW ++ KG I Sbjct: 103 DHPEILVNNISDLYRRTFKKFSISVASLDDAIFMRTTTSEHHQAAQKLWTRLRSKGFIKM 162 Query: 120 --YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y+GC + L +W+ EE Y F + +++ Sbjct: 163 QNYEGCAVNGHKL---------------------------EWVSEENYIFEFEPFLNEIE 195 Query: 178 SYYESHPEFILPIERR---NEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWI 232 S+ + + P + +E+ K+G LS+SR WG+ +P+D + MYVW Sbjct: 196 SWIV---KAVAPDAAKILIDELKDRRKTGNMSLSISRPRNRVPWGVAVPNDANHTMYVWF 252 Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 +AL NYLT GY + D + +FWP L VIG DI RFH I+WPA LL+A LPLPKKVF Sbjct: 253 EALINYLTAAGYGKH-DNNALEFWPPQLQVIGIDIARFHCIFWPAMLLAAELPLPKKVFV 311 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYFLVREIACGKDGFYDKDGLKKRV 350 HG G K+SKSL N + P E++E VG DA+R+F ++ F D + L+ + Sbjct: 312 HGHWTRDGMKMSKSLDNFVTPKELLELVGNQSDAVRWFCLKHATLKNVDFQD-ELLRIQS 370 Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPT 379 +ADLAN I NL+SR+ S L + G PT Sbjct: 371 DADLANKIANLLSRTTSKNL-NPSGAYPT 398 >gi|225562391|gb|EEH10670.1| methionine-tRNA synthetase [Ajellomyces capsulatus G186AR] Length = 355 Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 120/302 (39%), Positives = 165/302 (54%), Gaps = 37/302 (12%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKA 61 +++ Y++T I Y NA PH+GH Y MI+ADVL R+ L G D TGTDEHG KI +A Sbjct: 56 DKKPFYVTTPIFYVNAAPHVGHLYTMILADVLKRWQILLGNTDAKLLTGTDEHGLKIQQA 115 Query: 62 AQNAGVTTKVFVDQNSRNF--------------------------RDMADVLDISYDDFI 95 A GVT + DQN + F +++A ++ YD FI Sbjct: 116 AAALGVTPQALCDQNCKTFQVCVIRRSGDGLLWQLGRADAQDLDLKNLARKGNVGYDHFI 175 Query: 96 RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA--- 152 RTT+ H + R W ++ +G IY + GWYS+ DEA+Y V D Sbjct: 176 RTTDAEHKEAVRYFWDMLNHRGYIYTSKHEGWYSVSDEAFYPPSAVQPTLDPSTGRKIIT 235 Query: 153 ---QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209 VQW EE Y FRLSA+Q+ LL ++ +P+FI P + ++S V SGL+DLS+ Sbjct: 236 SIETGKEVQWASEENYHFRLSAFQEPLLEHFRKNPDFITPRNYMDGIVSAVTSGLQDLSI 295 Query: 210 SRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267 SR WGI +P D ++YVW+DAL NY+T GY P G+++ WPAD+ V+GKDI Sbjct: 296 SRPASRLKWGIPVPYDESQVIYVWLDALVNYITYAGY-PFPPGAQS-IWPADVQVVGKDI 353 Query: 268 LR 269 LR Sbjct: 354 LR 355 >gi|256374791|ref|YP_003098451.1| methionyl-tRNA synthetase [Actinosynnema mirum DSM 43827] gi|255919094|gb|ACU34605.1| methionyl-tRNA synthetase [Actinosynnema mirum DSM 43827] Length = 596 Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 157/525 (29%), Positives = 246/525 (46%), Gaps = 65/525 (12%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + TA+A+P N HIGH + +DV +R+ R+ G VL +GTDEHG I+ A+ Sbjct: 5 VLTAVAWPYANGPRHIGHVSGFGVPSDVFSRYMRMSGHRVLMVSGTDEHGTPISVQAEKE 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G++ + D+ +R + L +SYD F RTT H++ + L+ + G + Sbjct: 65 GLSVRALADKYNRVIAEDLQGLGLSYDLFTRTTTGNHYNVTQELFLAMWRNGYVVAKTGK 124 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNA---QHNPV--------------QWM 160 G S D + Y GA G ++ Q +PV +++ Sbjct: 125 GAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDSCGNQLDPVDLKNPKSRINGETPKFV 184 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218 E E + L + D L ++ ++ E+ R V+ F ++ + DL T DWGI Sbjct: 185 ETEHLYLDLPQFIDSLGTWLQTRSEW------RPNVLKFSQNLIGDLRPRAITRDLDWGI 238 Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADLHV---IGKD 266 IP D YVW DA+ Y + + NPD + +FW D +GKD Sbjct: 239 PIPLDGWRDQSMKRFYVWFDAVIGYFSASVEWARRSGNPDAWR-EFWTGDAQAYYFMGKD 297 Query: 267 ILRFHAIYWPAFLLSA--------------NLPLPKKVFSHGFILHKGEKISKSLGNVID 312 + FH++ WP+ LL L LP +V S F+ G K S S GNVI Sbjct: 298 NIVFHSLIWPSLLLGNNGEGAGGGEPGGFGKLNLPTEVVSSEFLTMSGSKFSTSRGNVIY 357 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 + + + G DALRYF+ +D + + +R N +LAN GNLV+RS+SM K+ Sbjct: 358 VTDFLRDFGPDALRYFIAAAGPENQDTDFTWEEFVRRTNFELANEWGNLVNRSISMAHKN 417 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 G +PTP A T +D +L R + EN++ A ++ + +V +RY Q+ Sbjct: 418 V-GAVPTPTAPTAADHELLETSRRAFGVVGENLRRSRFKAASSEAMRVVGAANRYLSDQE 476 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 PW+LK +P R TVL+ ++V++ LL F+P A K+ ++L Sbjct: 477 PWKLKD-DPARRDTVLHTALQVVQDANTLLTPFLPHSAQKVHELL 520 >gi|156086356|ref|XP_001610587.1| methionyl-tRNA synthetase [Babesia bovis T2Bo] gi|154797840|gb|EDO07019.1| methionyl-tRNA synthetase, putative [Babesia bovis] Length = 522 Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 131/435 (30%), Positives = 232/435 (53%), Gaps = 31/435 (7%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++T + Y N H+GHAY ++ AD + ++++L G +L +GTDEHG KIA AAQ G Sbjct: 38 LTTPLFYLNDPLHVGHAYTLVSADAIKKYYKLLGRTILILSGTDEHGTKIANAAQTNGEK 97 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++F+++ +++ D+ + D+S D + T+ ++H + + + + +KGDIY+G + G++ Sbjct: 98 PEIFIERMRQHYTDVYEAYDVSVDINVHTSLEQHKEKVKKTFGYLLEKGDIYEGVHKGYF 157 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 S +E YY + ++ G ++ V + E+ YFFRLS Y+D LL + FI+ Sbjct: 158 SPTEETYYTEFQLINGKSPLGFD-----VYPVAEKAYFFRLSKYKDALLQLIKRE-GFIV 211 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKI--PDDPQYIMYVWIDALTNYLTTTGYLD 246 P ER+NE I + L D++++R WG+ + P + +YVW+DAL Y Sbjct: 212 PKERQNEAIGLLSGNLPDIAITRSNTTWGVPVGQPGFEGHTIYVWLDALLGYCI------ 265 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 D ++ L + GKDILRF + WPA L++ +P+P+++ HG+++ EKISKS Sbjct: 266 --DRNQYGVGTETLMLFGKDILRFMTLVWPALLMALEMPMPQQMVCHGWLMSNDEKISKS 323 Query: 307 LGNVIDPIEVIEEVGV-DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI----GNL 361 G D + + +G D R+ L+ A G+D Y+ KRV D+ N + NL Sbjct: 324 KG---DKVFALPPIGTSDVSRFVLMNLGAFGEDIQYN----PKRVE-DMKNIVRDKYANL 375 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 R MI D G++ TE + ++ + ++ M++ I + + +V + Sbjct: 376 TYRLTGMI--DKRGILEINHRDTECINHFVEGITKKWECLQNIMEHHRIDKYVNEVTEVA 433 Query: 422 SEVDRYFDAQKPWEL 436 ++ Y ++ W+L Sbjct: 434 GCINSYITHKQVWDL 448 >gi|254172601|ref|ZP_04879276.1| methionyl-tRNA synthetase [Thermococcus sp. AM4] gi|214033530|gb|EEB74357.1| methionyl-tRNA synthetase [Thermococcus sp. AM4] Length = 739 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 146/528 (27%), Positives = 252/528 (47%), Gaps = 59/528 (11%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++A+ Y N H GH A + AD+ R+ RL G +VLF GTDEHG I A G Sbjct: 6 VTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEEVLFICGTDEHGTPITFRALKEGR 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + VD+ + + + IS+D F RT H+ + + K + G + K Sbjct: 66 SPREIVDEFHEHIKTTFERAKISFDYFGRTELPVHYRISQEFFLKALENGHLVKKVTKQA 125 Query: 128 YSLRDEAYYNDDEV-----YKGADGQY--------------------YNAQHNPVQWMEE 162 Y D+ + D V Y GA+ Q N NP+ + + Sbjct: 126 YCEHDKMFLPDRYVIGTCPYCGAENQRGDQCEVCGRPLTPEILINPRCNICGNPITFKDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESH---PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 Y+ ++ ++++L + ES P +N V+ ++ GL++ +++R DWGI Sbjct: 186 AHYYIKMQDFEERLKKWVESQHWKPNV------KNTVLGWINEGLEERAITR-DLDWGIP 238 Query: 220 IPDDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW------PADLHVIGKD 266 +P D + ++YVW +A Y++ T G + KFW H IGKD Sbjct: 239 VPLDDEDVKGKVLYVWFEAPIGYISITIEALKRAGKEKEWKKFWLNLDGETKVTHFIGKD 298 Query: 267 ILRFHAIYWPAFLLS----------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316 + FHAI+WPAFL++ A LP + ++ ++ +G+K S S I E Sbjct: 299 NIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLNLEGKKFSTSRNWAIWVHEF 358 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 ++ D LRY+L + +D + K ++N +L N +GN V R+++ + + +DG+ Sbjct: 359 LDAFPADYLRYYLTAIMPETRDSDFSFADFKVKINEELVNNLGNFVHRALTFVNRYFDGI 418 Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 +P G E D+ R +E+ E + AL +V+ L +RYFD Q+PW+ Sbjct: 419 VPERGELNELDKQAFEEIERAFEEVGELISQYRFKDALRRVMELAIFGNRYFDHQRPWKT 478 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 KT+ +R +T + V++++++ L ILL+ F+P + KI+ +L + + R Sbjct: 479 AKTDRERTATTVNVSLQIVKALGILLEPFLPDASEKIWHLLNLEELKR 526 >gi|289432281|ref|YP_003462154.1| methionyl-tRNA synthetase [Dehalococcoides sp. GT] gi|288946001|gb|ADC73698.1| methionyl-tRNA synthetase [Dehalococcoides sp. GT] Length = 553 Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 147/514 (28%), Positives = 244/514 (47%), Gaps = 40/514 (7%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E+++I A Y N+Q H+GH A + AD+ AR+HR G +VL +G+D HG I A+ Sbjct: 3 ERIFIGVAWPYANSQLHLGHVAGAYLPADIFARYHRTRGDEVLMVSGSDMHGTPITIRAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T ++ + F L IS+D + T H T + ++ + +KG IYK Sbjct: 63 QEGITAAEVAERYHQRFMASWPKLGISWDFYTSTATANHARTAQEMFLSLYEKGYIYKNT 122 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-------QYYNAQH----------NPVQ 158 + + D V Y+GA G + NA NP + Sbjct: 123 VCQPFCSHCNRFLPDRYVEGTCPHCKYEGARGDQCDNCGKPLNAAELLNFRCKNCGNPPE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E E +F +LSA++++L+ + E+ + + N + ++K GLKD +++R DWG+ Sbjct: 183 FRETEHFFLKLSAFEEELIRWVETKTHWRTNV--LNFTLRYLKEGLKDRAITRD-LDWGV 239 Query: 219 KIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADL---HVIGKDILR 269 +P P Y +YVW +A+T YL+ + G K+W D + IGKD + Sbjct: 240 PLPL-PGYEGKRLYVWFEAVTGYLSASKEWAASKGQPNAWQKYWGVDTKSYYFIGKDNIP 298 Query: 270 FHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH I WPA L+ L LP V S+ ++ + +K SKS N I +V+ GVD LRY Sbjct: 299 FHTIIWPAMLMGKGGLNLPYDVPSNEYLTTESQKFSKSRNNAIWVDDVLSRYGVDTLRYL 358 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L + D + +R N +L GNL R ++M+ ++YD +P G E Sbjct: 359 LSANMPESSDTDFSWREFVRRNNDELVATYGNLAQRVLTMVCRNYDNKVPEYGELDERSL 418 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 +++ + +L E + + N A+ ++L E +RY D + PW+ K + A+ L Sbjct: 419 TLIEKTAAMLCETDKALYNCNFREAIRLAMALAQEANRYLDEKAPWKEIKVDKAAAARSL 478 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 YV + + L + F+P+ + ++ L E Sbjct: 479 YVAMVALSGLRVAFYPFLPESSGRLSTYLGFGSE 512 >gi|300858095|ref|YP_003783078.1| methionyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41] gi|300685549|gb|ADK28471.1| Methionyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41] gi|302330378|gb|ADL20572.1| methionyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002] Length = 610 Score = 213 bits (541), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 167/530 (31%), Positives = 256/530 (48%), Gaps = 67/530 (12%) Query: 6 KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ +S A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG + A Sbjct: 4 RVLVSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMAGADVLMVSGTDEHGTPLLVQADK 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ K D+ +R + L +SYD F RTT + H+ + L+K + + G + K Sbjct: 64 EGVSVKELADRYNRQIVEDLAGLGLSYDLFTRTTTRNHYSVVQELFKGLYENGYMIKETT 123 Query: 125 SGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------QW 159 G S + Y GADG Q N + NPV Q+ Sbjct: 124 MGAVSPSTGRTLPDRYIEGTCPICGADGARGDQCDNCGNQLDPADLINPVSKINGGTPQF 183 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDW 216 +E E + L A D L + + ++ R V+ F + L+DL ++SR DW Sbjct: 184 IETEHFLLDLPALADALADWLKERQDW------RPNVLKFSLNLLEDLRPRAMSRD-IDW 236 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT---GY-LDNPDGSKAKFW--PA--DLHVI 263 GI IP D+ +YVW DA+ YL+ + Y + PD K ++W PA + + Sbjct: 237 GIPIPVEGWEDNGAKKLYVWFDAVVGYLSASIEWAYRIGKPDAWK-EWWTDPAASSYYFM 295 Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WPA LL L LP +V S F+ G K S S G Sbjct: 296 GKDNITFHSQIWPAELLGYQGKGARAGKLHTFGELNLPTEVVSSEFLTMSGSKFSSSKGI 355 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI + + E G D LRYF+ D + D +RVN +LANG GNLV+R+VSM Sbjct: 356 VIYVKDFLREFGPDPLRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMA 415 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 K++ G +PTPG TESD+ IL + + + + + + + + + + +V E + Y Sbjct: 416 YKNF-GEVPTPGELTESDQRILKLSAEAFEVVGDALAHSRFKQGITHAMHVVGEANAYIA 474 Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Q+PW+L K T +R +TVL+ ++V+ +LL ++P ++ ++ + L Sbjct: 475 EQEPWKLAKDETQRERLATVLWTALQVVSDCNVLLTPYLPHISQQVHETL 524 >gi|302205819|gb|ADL10161.1| methionyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231] gi|308276054|gb|ADO25953.1| methionyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19] Length = 610 Score = 213 bits (541), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 167/530 (31%), Positives = 256/530 (48%), Gaps = 67/530 (12%) Query: 6 KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ +S A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG + A Sbjct: 4 RVLVSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMAGADVLMVSGTDEHGTPLLVQADK 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ K D+ +R + L +SYD F RTT + H+ + L+K + + G + K Sbjct: 64 EGVSVKELADRYNRQIVEDLAGLGLSYDLFTRTTTRNHYSVVQELFKGLYENGYMIKETT 123 Query: 125 SGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------QW 159 G S + Y GADG Q N + NPV Q+ Sbjct: 124 MGAVSPSTGRTLPDRYIEGTCPICGADGARGDQCDNCGNQLDPADLINPVSKINGETPQF 183 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDW 216 +E E + L A D L + + ++ R V+ F + L+DL ++SR DW Sbjct: 184 IETEHFLLDLPALADALADWLKERQDW------RPNVLKFSLNLLEDLRPRAMSRD-IDW 236 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT---GY-LDNPDGSKAKFW--PA--DLHVI 263 GI IP D+ +YVW DA+ YL+ + Y + PD K ++W PA + + Sbjct: 237 GIPIPVEGWEDNGAKKLYVWFDAVVGYLSASIEWAYRIGKPDAWK-EWWTDPAASSYYFM 295 Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WPA LL L LP +V S F+ G K S S G Sbjct: 296 GKDNITFHSQIWPAELLGYQGKGARAGKLHTFGELNLPTEVVSSEFLTMSGSKFSSSKGI 355 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI + + E G D LRYF+ D + D +RVN +LANG GNLV+R+VSM Sbjct: 356 VIYVKDFLREFGPDPLRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMA 415 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 K++ G +PTPG TESD+ IL + + + + + + + + + + +V E + Y Sbjct: 416 YKNF-GEVPTPGELTESDQRILKLSAEAFEVVGDALAHSRFKQGITHAMHVVGEANAYIA 474 Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Q+PW+L K T +R +TVL+ ++V+ +LL ++P ++ ++ + L Sbjct: 475 EQEPWKLAKDETQRERLATVLWTALQVVSDCNVLLTPYLPHISQQVHETL 524 >gi|304391147|ref|ZP_07373099.1| methionine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326030|gb|EFL93276.1| methionine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 605 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 161/525 (30%), Positives = 253/525 (48%), Gaps = 59/525 (11%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +I +A+A+P N HIGH I +DV +R+ R+ G DVL +GTDEHG I AA+ Sbjct: 3 HILSAVAWPYANGPRHIGHVAGFGIPSDVFSRYMRMRGHDVLMVSGTDEHGTPILVAAEA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG+T + ++N+R + L +SYD F RTT H+DT R ++K + D G + Sbjct: 63 AGLTPRELANRNNRAIVEDLCQLGLSYDLFTRTTTGNHYDTVRAMFKVVRDNGYMKVQTT 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159 G S D + +GA G +A N + ++ Sbjct: 123 RGAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDACGNQLDPTDLIRPRSKINGETPEF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 +E + YF L A L + + + R VI F K+ LKD+ T DWG Sbjct: 183 VETDHYFLDLPALARALNEWLDDREKNG---NWRPNVIKFSKNFLKDIKPRAMTRDIDWG 239 Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADL--HVIGKDI 267 I IP +D +YVW DA+ YL+ + G + W P L + +GKD Sbjct: 240 IPIPGWEDQPKRLYVWFDAVIGYLSASIEWARRFGQSPEDWRQWWNDPESLSYYFMGKDN 299 Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 + FH+ WPA +L N L LP +V S F+ +G+K + S G VI Sbjct: 300 IVFHSQIWPAEMLGYNGRGDFGGKPGDLGVLNLPTEVVSSEFLTMEGKKFASSRGIVIYV 359 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +++ VDALRYF+ +D + +R N++L GNLV+R+ SMI K + Sbjct: 360 RDMLSRYQVDALRYFISAAGPENQDSDFTWSEFVRRTNSELVAAWGNLVNRTASMIAKKF 419 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 G IP G FT D+++L + + + + +++ ALA+++ LV E +RY +P Sbjct: 420 -GEIPPAGDFTAEDQALLDAVNAGFETVGDLIESHHQKAALAEIMRLVGEANRYVTTTEP 478 Query: 434 WELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++LK ++ DR T+L+V +V+ L +++ F+P +N I +L Sbjct: 479 FKLKDESQRDRLGTILHVLAQVVTDLNLMMSPFLPTSSNAIDKVL 523 >gi|315656075|ref|ZP_07908966.1| methionine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315493077|gb|EFU82677.1| methionine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 605 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 161/525 (30%), Positives = 253/525 (48%), Gaps = 59/525 (11%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +I +A+A+P N HIGH I +DV +R+ R+ G DVL +GTDEHG I AA+ Sbjct: 3 HILSAVAWPYANGPRHIGHVAGFGIPSDVFSRYMRMRGHDVLMVSGTDEHGTPILVAAEA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG+T + ++N+R + L +SYD F RTT H+DT R ++K + D G + Sbjct: 63 AGLTPRELANRNNRAIVEDLCQLGLSYDLFTRTTTGNHYDTVRAMFKVVRDNGYMKVQTT 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159 G S D + +GA G +A N + ++ Sbjct: 123 RGAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDACGNQLDPTDLIRPRSKINGETPEF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 +E + YF L A L + + + R VI F K+ LKD+ T DWG Sbjct: 183 VETDHYFLDLPALARALNEWLDDREKNG---NWRPNVIKFSKNFLKDIKPRAMTRDIDWG 239 Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADL--HVIGKDI 267 I IP +D +YVW DA+ YL+ + G + W P L + +GKD Sbjct: 240 IPIPGWEDQPKRLYVWFDAVIGYLSASIEWARRFGQSPEDWRQWWNDPESLSYYFMGKDN 299 Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 + FH+ WPA +L N L LP +V S F+ +G+K + S G VI Sbjct: 300 IVFHSQIWPAEMLGYNGRGDFGGKPGDLGVLNLPTEVVSSEFLTMEGKKFASSRGIVIYV 359 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +++ VDALRYF+ +D + +R N++L GNLV+R+ SMI K + Sbjct: 360 RDMLSRYQVDALRYFISAAGPENQDSDFTWSEFVRRTNSELVAAWGNLVNRTASMIAKKF 419 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 G IP G FT D+++L + + + + +++ ALA+++ LV E +RY +P Sbjct: 420 -GEIPPAGDFTAEDQALLDAVNAGFETVGDLIESHHQKAALAEIMRLVGEANRYVTTTEP 478 Query: 434 WELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++LK ++ DR T+L+V +V+ L +++ F+P +N I +L Sbjct: 479 FKLKDESQRDRLGTILHVLAQVVTDLNLMMSPFLPTSSNAIDKVL 523 >gi|20094286|ref|NP_614133.1| methionyl-tRNA synthetase [Methanopyrus kandleri AV19] gi|25009365|sp|Q8TX28|SYM_METKA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|19887329|gb|AAM02063.1| Methionyl-tRNA synthetase [Methanopyrus kandleri AV19] Length = 668 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 151/512 (29%), Positives = 242/512 (47%), Gaps = 43/512 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K+ ++TA+AY N HIGH + ADV RF ++ G+D + GTD HG IA A+ Sbjct: 3 KVLVTTALAYTNGPLHIGHVRSTYLPADVYTRFLKMRGIDAIHIGGTDNHGVPIALQAEL 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDF---IRTTEKRHHDTCRILWKKISDKGDIYK 121 G + V++ ++ + L+I +D+F R H D + +K++ + G I + Sbjct: 63 EGKDPEEIVEKYHEMIKEDLERLNIHFDEFSCTCREFNPDHVDMTQWFFKRLYEAGYIEE 122 Query: 122 GCYSGWYSLRDEAYYNDDEV-----YKGADG------QYYNAQHNPVQWMEEEG------ 164 Y E D V Y GA+G + PVQ E Sbjct: 123 REVEQLYCPECERPLPDRYVEGVCPYCGAEGARGDHCEACGRYLEPVQLEEPRCVICGSK 182 Query: 165 --------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 FF+LS +++ L + ES+ LP RN I +V+ GLKD + R DW Sbjct: 183 PEVRRTMHLFFKLSEFEEDLKKWLESNDN--LPKNVRNYAIQWVREGLKDWDIVRD-LDW 239 Query: 217 GIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD----LHVIGKDILR 269 G+ +P + + YVW DA Y+T T Y D +W ++ +H IGKDI+ Sbjct: 240 GVPVPLEGYEDKVFYVWFDAPIGYVTFTKQYCDRVGQDWKDYWFSEDTKIVHFIGKDIIV 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 HA++WPA L+ LP + + ++ +GEK+S S G V+ + + D LRY+L Sbjct: 300 HHALFWPAMLMGVGATLPYTIVAGEYLTLEGEKMSTSRGWVVWVKDFTKLFPADLLRYYL 359 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 + +D + + RVN +L +GN V R++S I + DG +P E+D+ Sbjct: 360 IVVSPLTRDADFSWGDFRDRVNNELVANLGNFVYRTLSFIYRFLDGNVPE----AETDQE 415 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 I+ Q + E+++ AL +V+ L + YF +PW+LK +P+R + VL Sbjct: 416 IVDKIKETHQRVTEHLEKFRFREALTEVLRLSKFGNEYFQEHEPWKLKDEDPERCAEVLR 475 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 +++ LA++L F+P A KI+ L D Sbjct: 476 GCARIVKALAVMLAPFLPDSAEKIWQSLGYED 507 >gi|15217129|gb|AAK92522.1|AF401043_1 methyonyl-tRNA synthetase [Lactobacillus sakei] Length = 395 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 112/295 (37%), Positives = 176/295 (59%), Gaps = 4/295 (1%) Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279 + +P++++YVW+DAL+NY+T GY + D K+WPAD+H++GK+I+RFHAIYWP FL Sbjct: 1 VTGNPKHVVYVWLDALSNYITALGYGSDDDQLFNKYWPADVHLVGKEIVRFHAIYWPIFL 60 Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 ++ LPLPK++F HG++L K K+SKS GNV+ P ++E G+DALRY+L+R I G DG Sbjct: 61 MALGLPLPKQIFGHGWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRAIPFGNDG 120 Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVL 398 + + R+N DLAN +GNL++R+V+MI K DG +P+ A T D + + ++ + Sbjct: 121 VFTPEDFVSRINYDLANDLGNLLNRTVAMINKYDDGHVPSYQADVTAFDADLQATATQTI 180 Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIR 456 + M AL + L+S ++Y D +PW L K + +A +VL E +R Sbjct: 181 AQYSTLMDQLKFSDALDTIWQLISRANKYIDETEPWVLAKDDSRKAELDSVLAHLAESLR 240 Query: 457 QLAILLQAFVPKLANKIFDILFVA-DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 +A+LLQ + ++F L + D+ + + R + PIFPR Sbjct: 241 IVALLLQPVMTHAPREMFAQLGLDFDQEAQREMVYGRFPSDIKVIAKGTPIFPRL 295 >gi|72160793|ref|YP_288450.1| methionyl-tRNA synthetase [Thermobifida fusca YX] gi|123760895|sp|Q47SZ0|SYM_THEFY RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|71914525|gb|AAZ54427.1| methionyl-tRNA synthetase [Thermobifida fusca YX] Length = 606 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 158/529 (29%), Positives = 245/529 (46%), Gaps = 64/529 (12%) Query: 6 KLYISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 K +I TA+A+P N HIGH + +DV ARF R+ G +VL +GTDEHG I A Sbjct: 4 KRHILTAVAWPYANGPRHIGHVSGFGVPSDVFARFQRMSGNNVLMVSGTDEHGTPIQVLA 63 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GV+ + D+ +R + L +SYD F RTT H+ + L+ + G I+ Sbjct: 64 DQEGVSARELADRYNRIIAEDLVALGLSYDLFTRTTTANHYAVVQELFTGLYRNGYIFSK 123 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYN---AQHNPV-------------- 157 G S D V Y GA G + Q +P Sbjct: 124 TTKGAISPSTGRTLPDRYVEGTCPICGYDGARGDQCDNCGKQLDPTDLINPRSKINGETP 183 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215 ++++ E + L A+ ++L + +S E R V+ F + L +L T D Sbjct: 184 EFVDTEHFMLDLPAFAEQLSEWLKSKGG-----EWRPNVLKFSLNLLDELQPRAITRDLD 238 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262 WG+ IP D P +YVW DA+ YL+ + +P+ + K+W + Sbjct: 239 WGVPIPLEGWRDQPNKRLYVWFDAVIGYLSASIEWAKRTGDPEAWR-KWWQNSDAESFYF 297 Query: 263 IGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLG 308 +GKD + FH+ WPA LL L LP +V S F+ +G K S S Sbjct: 298 MGKDNIVFHSEIWPAMLLGYSGKGSKGGEPGSLGALNLPTEVVSSEFLTMEGRKFSSSRR 357 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 VI + +E DALRY+++ +D + +R N +L GNLV+RS+SM Sbjct: 358 VVIYVRDFLERYDADALRYYIIAAGPETQDTDFTWAEFVRRNNDELVATWGNLVNRSISM 417 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428 K+ G IP G T++D ++L + E + AL + + +V+E ++YF Sbjct: 418 AAKNI-GHIPEAGELTDADRAVLDASKAAFATVGERLNRAQFKAALQEAMRVVAEANKYF 476 Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Q PW+LKKT+P R TVL+V ++++ LL F+P +NK++++L Sbjct: 477 SEQAPWKLKKTDPKRMETVLHVALQLVSDAKTLLTPFLPASSNKVYEML 525 >gi|73748231|ref|YP_307470.1| methionyl-tRNA synthetase [Dehalococcoides sp. CBDB1] gi|123732537|sp|Q3ZZB2|SYM_DEHSC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|73659947|emb|CAI82554.1| methionyl-tRNA synthetase [Dehalococcoides sp. CBDB1] Length = 553 Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 146/514 (28%), Positives = 243/514 (47%), Gaps = 40/514 (7%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E+++I A Y N+Q H+GH A + AD+ AR+HR G +VL +G+D HG I A+ Sbjct: 3 ERIFIGVAWPYANSQLHLGHVAGAYLPADIFARYHRTRGDEVLMVSGSDMHGTPITIRAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T ++ + F L IS+D + T H T + ++ + +KG IYK Sbjct: 63 QEGITAAEVAERYHQRFMASWPKLGISWDFYTSTATANHARTAQEMFLSLYEKGYIYKNT 122 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-------QYYNAQH----------NPVQ 158 + + D V Y+GA G + NA NP + Sbjct: 123 VCQPFCSHCNRFLPDRYVEGTCPHCKYEGARGDQCDNCGKPLNAAELLNFRCKNCGNPPE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E E +F +LSA++++L+ + E+ + + N + ++K GLKD +++R DWG+ Sbjct: 183 FRETEHFFLKLSAFEEELIRWVETKTHWRTNV--LNFTLRYLKEGLKDRAITRD-LDWGV 239 Query: 219 KIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADL---HVIGKDILR 269 +P P Y +YVW +A+ YL+ + G K+W D + IGKD + Sbjct: 240 PLPL-PGYEGKRLYVWFEAVIGYLSASKEWAASKGQPNAWQKYWGGDTKSYYFIGKDNIP 298 Query: 270 FHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH I WPA L+ L LP V S+ ++ + +K SKS N I +V+ GVD LRY Sbjct: 299 FHTIIWPAMLMGKGGLNLPYDVPSNEYLTTESQKFSKSRNNAIWVDDVLSRYGVDTLRYL 358 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L + D + +R N +L GNL R ++M+ ++YD +P G E Sbjct: 359 LSANMPESSDTDFSWREFVRRNNDELVATYGNLAQRVLTMVCRNYDNKVPEYGELDERSL 418 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 +++ + +L E + + N A+ ++L E +RY D + PW+ K + A+ L Sbjct: 419 TLIEKTAAMLCETDKALYNCNFREAIRLAMALAQEANRYLDEKAPWKEIKVDKAAAARSL 478 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 YV + + L + F+P+ + ++ L E Sbjct: 479 YVAMVALSGLRVAFYPFLPESSGRLSTYLGFGSE 512 >gi|147669013|ref|YP_001213831.1| methionyl-tRNA synthetase [Dehalococcoides sp. BAV1] gi|187647716|sp|A5FS74|SYM_DEHSB RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|146269961|gb|ABQ16953.1| methionyl-tRNA synthetase [Dehalococcoides sp. BAV1] Length = 553 Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 146/514 (28%), Positives = 243/514 (47%), Gaps = 40/514 (7%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E+++I A Y N+Q H+GH A + AD+ AR+HR G +VL +G+D HG I A+ Sbjct: 3 ERIFIGVAWPYANSQLHLGHVAGAYLPADIFARYHRTRGDEVLMVSGSDMHGTPITIRAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T ++ + F L IS+D + T H T + ++ + +KG IYK Sbjct: 63 QEGITAAEVAERYHQRFMASWPKLGISWDFYTSTATANHARTAQEMFLSLYEKGYIYKNT 122 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-------QYYNAQH----------NPVQ 158 + + D V Y+GA G + NA NP + Sbjct: 123 VCQPFCSHCNRFLPDRYVEGTCPHCKYEGARGDQCDNCGKPLNAAELLNFRCKNCGNPPE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E E +F +LSA++++L+ + E+ + + N + ++K GLKD +++R DWG+ Sbjct: 183 FRETEHFFLKLSAFEEELIRWVETKTHWRTNV--LNFTLRYLKEGLKDRAITRD-LDWGV 239 Query: 219 KIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADL---HVIGKDILR 269 +P P Y +YVW +A+ YL+ + G K+W D + IGKD + Sbjct: 240 PLPL-PGYEGKRLYVWFEAVIGYLSASKEWAASKGQPNAWQKYWGVDTKSYYFIGKDNIP 298 Query: 270 FHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH I WPA L+ L LP V S+ ++ + +K SKS N I +V+ GVD LRY Sbjct: 299 FHTIIWPAMLMGKGGLNLPYDVPSNEYLTTESQKFSKSRNNAIWVDDVLSRYGVDTLRYL 358 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L + D + +R N +L GNL R ++M+ ++YD +P G E Sbjct: 359 LSANMPESSDTDFSWREFVRRNNDELVATYGNLAQRVLTMVCRNYDNKVPEYGELDERSL 418 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 +++ + +L E + + N A+ ++L E +RY D + PW+ K + A+ L Sbjct: 419 TLIEKTAAMLCETDKALYNCNFREAIRLAMALAQEANRYLDEKAPWKEIKVDKAAAARSL 478 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 YV + + L + F+P+ + ++ L E Sbjct: 479 YVAMVALSGLRVAFYPFLPESSGRLSTYLGFGSE 512 >gi|315230502|ref|YP_004070938.1| methionyl-tRNA synthetase [Thermococcus barophilus MP] gi|315183530|gb|ADT83715.1| methionyl-tRNA synthetase [Thermococcus barophilus MP] Length = 731 Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 143/531 (26%), Positives = 255/531 (48%), Gaps = 62/531 (11%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++A+ Y N H GH A + AD+ R+ RL G DV++ GTDEHG I A G Sbjct: 6 VTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVIYICGTDEHGTPITFRALKEGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + VD + + + IS+D F RT H+ + + + G + K Sbjct: 66 SPREIVDYYYEHIKTTFERAKISFDYFGRTELPVHYKVSQDFFLRALKNGHLVKKVTKQA 125 Query: 128 YSLRDEAYYNDDEV-----YKGADGQY--------------------YNAQHNPVQWMEE 162 Y D+ + D V Y GA+ Q N NP+ + + Sbjct: 126 YCEHDKMFLPDRYVIGTCPYCGAEEQRGDQCEVCGRPLTPEILINPRCNICGNPITFKDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 Y+ ++ +Q+KL + ES+ + + RN V+ ++K GL++ +++R +WGI +P Sbjct: 186 AHYYIKMQDFQEKLRKWIESNEHWKPNV--RNTVLGWIKEGLEERAITR-DLNWGIPVPL 242 Query: 222 DDPQY---IMYVWIDALTNYLTTT---------------GYLDNPDGSKAKFWPADLHVI 263 +D + ++YVW +A Y++ T +L N DG + + +H I Sbjct: 243 EDKEMSGKVLYVWFEAPIGYISITIEYFKRIGKEEEWKKYWLANYDGEETRI----IHFI 298 Query: 264 GKDILRFHAIYWPAFLLSAN----------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 GKD + FHAI+WPAFL+S LP + ++ ++ +G+K S S I Sbjct: 299 GKDNIPFHAIFWPAFLMSYGKFEDKNGEFKWLLPYDIPANEYLNLEGKKFSTSRNWAIWV 358 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 E ++E D LRY+L + +D ++ K ++N +L N +GN V R+++ + + + Sbjct: 359 HEFLDEFPADYLRYYLTAIMPETRDSDFNFKDFKAKINEELVNILGNFVHRALTFVNRYF 418 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 DG +P G E D + +E+ E + AL + ++L + +RYFD Q+P Sbjct: 419 DGKVPERGELDELDRQAFEEIEKAFEEVGELIAKYRFKDALKRAMALATFGNRYFDYQQP 478 Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 W+ KT+ R +T + V++++++ L I+++ F+P KI+ +L + + R Sbjct: 479 WKTAKTDKLRTATTVNVSLQIVKALGIIIEPFLPDAGEKIWHLLNLEELKR 529 >gi|14521189|ref|NP_126664.1| methionyl-tRNA synthetase [Pyrococcus abyssi GE5] gi|14548275|sp|Q9V011|SYM_PYRAB RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|49258778|pdb|1RQG|A Chain A, Methionyl-Trna Synthetase From Pyrococcus Abyssi gi|5458407|emb|CAB49895.1| metS methionyl-tRNA synthetase [Pyrococcus abyssi GE5] Length = 722 Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 143/519 (27%), Positives = 250/519 (48%), Gaps = 55/519 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++A+ Y N H GH A + AD+ R+ RL G DV+F GTDEHG I+ A G Sbjct: 6 VTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKEGR 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + VD+ + IS+D F RT H+ + + K + G + K Sbjct: 66 SPREIVDEFHEQIKITFQRAKISFDFFGRTELPIHYKLSQEFFLKAYENGHLVKKVTKQA 125 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQH--------------------NPVQWMEE 162 Y D+ + D V Y GA+ Q + P+ + + Sbjct: 126 YCEHDKMFLPDRFVIGTCPYCGAEDQKGDQCEVCGRPLTPEILINPRCAICGRPISFRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222 Y+ ++ + ++L + E P +N V+S+++ GL++ +++R +WGI +P Sbjct: 186 AHYYIKMQDFAERLKRWIEKQP---WKPNVKNMVLSWIEEGLEERAITR-DLNWGIPVPL 241 Query: 223 DPQ----YIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW------PADLHVIGKDIL 268 D + ++YVW +A Y++ T + P+ K K+W +H IGKD + Sbjct: 242 DEEDMKGKVLYVWFEAPIGYISITIEHFKRIGKPNEWK-KYWLNIDGQTRVIHFIGKDNI 300 Query: 269 RFHAIYWPAFLLS----------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 FHAI+WPAFL++ A LP + ++ ++ +G+K S S I E ++ Sbjct: 301 PFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWVHEFLD 360 Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 D LRY+L + +D + K R+N +L N +GN V R+++ + + +DG++P Sbjct: 361 VFPADYLRYYLTTIMPETRDSDFSFSDFKVRINEELVNNLGNFVHRALTFVNRYFDGVVP 420 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 G E D L + +E+ E + N AL +V+SL S +RYFD ++PW+ K Sbjct: 421 ERGELDELDREALEEIEKAFKEVGELIMNYRFKDALKRVMSLASFGNRYFDHKQPWKTAK 480 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + R T + +++++++ L ILL+ F+P + KI+ +L Sbjct: 481 EDKVRTGTTVNISLQIVKALGILLEPFLPDASEKIWHLL 519 >gi|14590837|ref|NP_142909.1| methionyl-tRNA synthetase [Pyrococcus horikoshii OT3] gi|7388278|sp|O58721|SYM_PYRHO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|3257407|dbj|BAA30090.1| 723aa long hypothetical methionyl-tRNA synthetase [Pyrococcus horikoshii OT3] Length = 723 Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 142/519 (27%), Positives = 250/519 (48%), Gaps = 55/519 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++A+ Y N H GH A + AD+ R+ RL G DV+F GTDEHG I+ A G Sbjct: 6 VTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKEGR 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + VD+ + + IS+D F RT H+ + + K + G + K Sbjct: 66 SPREIVDEFHEHIKITFQRAKISFDFFGRTELPIHYKLSQQFFLKAYENGHLVKKVTKQA 125 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQH--------------------NPVQWMEE 162 Y D+ + D V + GA+ Q + P+ + E Sbjct: 126 YCEHDKMFLPDRFVIGTCPFCGAENQRGDQCEVCGRPLTPEILINPRCALCGRPISFRES 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222 Y+ ++ + +KL + E+ P +N V+ +++ GL++ +++R +WGI +P Sbjct: 186 AHYYIKMQDFAEKLKRWIENQP---WKPNVKNMVLKWIEEGLEERAITR-DLNWGIPVPL 241 Query: 223 DPQ----YIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW------PADLHVIGKDIL 268 D + ++YVW +A Y++ T L P+ K K+W +H IGKD + Sbjct: 242 DEEDMKNKVLYVWFEAPIGYISITMEYFKRLGKPNEWK-KYWLNIDSETRVIHFIGKDNI 300 Query: 269 RFHAIYWPAFLLS----------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 FHAI+WPAFL++ A LP + ++ ++ +G+K S S I E ++ Sbjct: 301 PFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWVHEFLD 360 Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 D LRY+L + +D + K R+N +L N +GN V R+++ + + +DG++P Sbjct: 361 VFPADYLRYYLTTIMPETRDSDFSFAEFKTRINEELVNNLGNFVHRAMTFVNRYFDGIVP 420 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 G E D L + +E+ E + N AL +V+ L S ++YFD ++PW+ K Sbjct: 421 ERGELDELDRQALEEIEKAFEEVGELIMNYRFKDALKRVMELASFGNKYFDHKQPWKTAK 480 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + R T + +++++++ L ILL+ F+P + KI+ +L Sbjct: 481 EDRARTGTTVNISLQIVKALGILLEPFLPDASEKIWHLL 519 >gi|134097405|ref|YP_001103066.1| methionyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] gi|187647765|sp|A4F7W6|SYM_SACEN RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|133910028|emb|CAM00140.1| methionyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 593 Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 157/525 (29%), Positives = 249/525 (47%), Gaps = 68/525 (12%) Query: 11 TAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 TA+A+P N HIGH + +DV +R+ R+ G VL +GTDEHG I+ A G+ Sbjct: 2 TAVAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNRVLMVSGTDEHGTPISVQADKEGL 61 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 +T+ D+ +R + L +SYD F RTT H++ + ++ + G I +G Sbjct: 62 STRELADKYNRVITEDLQGLGLSYDLFTRTTTGNHYEVVQQIFLALHRNGYIIPKTTTGA 121 Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQ--------WMEE 162 S D + Y GA G Q N + NPV ++E Sbjct: 122 ISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPAELINPVSRINGEKPDFVET 181 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDWGIK 219 E F LSA+ + L + + + R+ V+ F ++ ++D+ ++SR DWG+ Sbjct: 182 EHLFLDLSAFTESLGKWLSTRTGW------RSNVLKFTQNLVEDMRPRAISRD-LDWGVP 234 Query: 220 IP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIGKD 266 IP D +YVW DA+ Y + + +PD K +FW + +GKD Sbjct: 235 IPLDGWRDQSMKRLYVWFDAVIGYFSASVEWARRTGDPDAWK-QFWTDPSAQGYYFMGKD 293 Query: 267 ILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312 + FHA WPA L+ N L LP ++ S F+ G K S S G VI Sbjct: 294 NITFHAQIWPALLMGHNGQGDKGGEVGPYGQLNLPDEIVSSEFLTMSGSKFSTSRGTVIY 353 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 + + E G D LRYF+ +D + D +RVN +LAN GNLV+RSVSM K+ Sbjct: 354 VRDFLREFGPDTLRYFISVAGPENQDTDFTWDEFVRRVNFELANEWGNLVNRSVSMAAKN 413 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 +G +P P + +DE + ++ + + ++Q A + + +VS ++Y Q+ Sbjct: 414 -NGAVPAPTSPRAADEELKTLSRNAFETVGGHLQRSRFKAAAQEAMRVVSAANKYLSDQE 472 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 PW+LK+ +PDR VL+ ++V+ LL F+P A K+ ++L Sbjct: 473 PWKLKE-DPDRRDAVLHTALQVVSDANTLLTPFLPHSAQKVHELL 516 >gi|291004605|ref|ZP_06562578.1| methionyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 598 Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 157/527 (29%), Positives = 250/527 (47%), Gaps = 68/527 (12%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + TA+A+P N HIGH + +DV +R+ R+ G VL +GTDEHG I+ A Sbjct: 5 VLTAVAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNRVLMVSGTDEHGTPISVQADKE 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G++T+ D+ +R + L +SYD F RTT H++ + ++ + G I + Sbjct: 65 GLSTRELADKYNRVITEDLQGLGLSYDLFTRTTTGNHYEVVQQIFLALHRNGYIIPKTTT 124 Query: 126 GWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQ--------WM 160 G S D + Y GA G Q N + NPV ++ Sbjct: 125 GAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPAELINPVSRINGEKPDFV 184 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDWG 217 E E F LSA+ + L + + + R+ V+ F ++ ++D+ ++SR DWG Sbjct: 185 ETEHLFLDLSAFTESLGKWLSTRTGW------RSNVLKFTQNLVEDMRPRAISRD-LDWG 237 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIG 264 + IP D +YVW DA+ Y + + +PD K +FW + +G Sbjct: 238 VPIPLDGWRDQSMKRLYVWFDAVIGYFSASVEWARRTGDPDAWK-QFWTDPSAQGYYFMG 296 Query: 265 KDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNV 310 KD + FHA WPA L+ N L LP ++ S F+ G K S S G V Sbjct: 297 KDNITFHAQIWPALLMGHNGQGDKGGEVGPYGQLNLPDEIVSSEFLTMSGSKFSTSRGTV 356 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 I + + E G D LRYF+ +D + D +RVN +LAN GNLV+RSVSM Sbjct: 357 IYVRDFLREFGPDTLRYFISVAGPENQDTDFTWDEFVRRVNFELANEWGNLVNRSVSMAA 416 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 K+ +G +P P + +DE + ++ + + ++Q A + + +VS ++Y Sbjct: 417 KN-NGAVPAPTSPRAADEELKTLSRNAFETVGGHLQRSRFKAAAQEAMRVVSAANKYLSD 475 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Q+PW+LK+ +PDR VL+ ++V+ LL F+P A K+ ++L Sbjct: 476 QEPWKLKE-DPDRRDAVLHTALQVVSDANTLLTPFLPHSAQKVHELL 521 >gi|152979917|ref|YP_001352802.1| methionyl-tRNA synthetase [Janthinobacterium sp. Marseille] gi|187647729|sp|A6SX05|SYM_JANMA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|151279994|gb|ABR88404.1| Methionyl-tRNA synthetase [Janthinobacterium sp. Marseille] Length = 700 Score = 209 bits (533), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 163/519 (31%), Positives = 245/519 (47%), Gaps = 53/519 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL+++TA+ Y N H+GH E I AD+ RF R+ G +V F D HG I AA+ A Sbjct: 8 KLFVTTALPYANGAFHVGHIMEYIQADIWVRFQRMQGNEVHFVGADDAHGAPIMIAAEKA 67 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD-IYKGCY 124 G+T + FV + + D I +D++ T +H+ R +++++ D I Sbjct: 68 GLTPQQFVANIAAGRKQYLDGFHIEFDNWSSTDSPENHELSREIYRRLRDDAKLITTKSV 127 Query: 125 SGWYSLRDEAYYND----DEVYK-GADGQYYNAQHN---------------------PVQ 158 +Y E + D E K G QY ++ N PV+ Sbjct: 128 EQFYDPVKEMFLPDRYIKGECPKCGTKDQYGDSCENCSAVYAPTDLKHPYSTLTGATPVR 187 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER-RNEVISFVK------SGLKDLSLSR 211 + +FFRLS K +++ E+ L +R ++EV + K GL D +SR Sbjct: 188 -KSSDHFFFRLS--DPKCVAFLR---EWALDGQRLQSEVANKAKEWLEGEGGLGDWDISR 241 Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNP----DGSKAKFWPADLHVIGKD 266 +GI+IPD P YVW+DA YL T Y D D A H IGKD Sbjct: 242 DAPYFGIEIPDAPGKYFYVWLDAPVGYLATLKNYFDKTGRDFDAFMADPSTEQYHFIGKD 301 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA-- 324 I FH ++WPA L A++ +P VF HGFI GEK+SKS G I P+ + E+G++ Sbjct: 302 ITYFHTLFWPAMLKFADMKVPNNVFVHGFITVSGEKMSKSRGTGISPLRYL-EIGMNPEW 360 Query: 325 LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 LRY++ +++ +D + D RVN+DL N+ SR+ I K +DG + T + Sbjct: 361 LRYYIAAKLSSKVEDIDFTSDDFIARVNSDLIGKYINIASRAAGFITKKFDGRVAT--DW 418 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 SD++ LS V EI+ + +AL ++ ++ Y DA KPWEL K Sbjct: 419 ATSDDAFLSRLRNVASEIQALYDQREYGKALRAIMEQADAINAYVDANKPWELAKDPAKE 478 Query: 444 AS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 A+ V +E R L I L+ +P LA ++ L +A Sbjct: 479 AALQEVCSRLLEAFRILTIYLKPVLPALAKQVEAQLNIA 517 >gi|315656049|ref|ZP_07908947.1| methionine--tRNA ligase [Mobiluncus curtisii ATCC 51333] gi|315490113|gb|EFU79740.1| methionine--tRNA ligase [Mobiluncus curtisii ATCC 51333] Length = 605 Score = 209 bits (532), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 160/525 (30%), Positives = 252/525 (48%), Gaps = 59/525 (11%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +I +A+A+P N HIGH I +DV +R+ R+ G DVL +GTDEHG I AA+ Sbjct: 3 HILSAVAWPYANGPRHIGHVAGFGIPSDVFSRYMRMRGHDVLMVSGTDEHGTPILVAAEA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG+T + ++N+R + L +SYD F RTT H++T R ++K + D G + Sbjct: 63 AGLTPRELANRNNRAIVEDLCQLGLSYDLFTRTTTGNHYETVRAMFKVVRDNGYMKVQTT 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159 G S D + +GA G +A N + ++ Sbjct: 123 RGAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDACGNQLDPTDLIRPRSKINGETPEF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 +E + YF L A L + + + R VI F K+ LKD+ T DWG Sbjct: 183 VETDHYFLDLPALARALNEWLDDREKNG---NWRPNVIKFSKNFLKDIKPRAMTRDIDWG 239 Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADL--HVIGKDI 267 I IP +D +YVW DA+ YL+ + G + W P L + +GKD Sbjct: 240 IPIPGWEDQPKRLYVWFDAVIGYLSASIEWARRFGQSPEDWRQWWNDPEALSYYFMGKDN 299 Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 + FH+ WPA +L N L LP +V S F+ +G+K + S G VI Sbjct: 300 IVFHSQIWPAEMLGYNGRGDFGGKPGDLGVLNLPTEVVSSEFLTMEGKKFASSRGIVIYV 359 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +++ VDALRYF+ +D + +R N++L GNLV+R+ SMI K + Sbjct: 360 RDMLSRYQVDALRYFISAAGPENQDSDFTWSEFVRRTNSELVAAWGNLVNRTASMIAKKF 419 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 G IP G FT D+ +L + + + + +++ ALA+++ LV E +RY +P Sbjct: 420 -GEIPPAGDFTAEDQELLDAVNAGFETVGDLIESHHQKAALAEIMRLVGEANRYVTTTEP 478 Query: 434 WELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++LK ++ DR T+L+V +V+ L +++ F+P +N I +L Sbjct: 479 FKLKDESQRDRLGTILHVLAQVVTDLNLMMSPFLPTSSNAIDKVL 523 >gi|300781666|ref|ZP_07091520.1| methionine--tRNA ligase [Corynebacterium genitalium ATCC 33030] gi|300533373|gb|EFK54434.1| methionine--tRNA ligase [Corynebacterium genitalium ATCC 33030] Length = 626 Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 167/534 (31%), Positives = 251/534 (47%), Gaps = 73/534 (13%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E + + A Y N HIGH + +DV AR+ R+ G +VL +GTDEHG + A Sbjct: 15 ENVLVCVAWPYANGPRHIGHVAGFGVPSDVFARYQRMAGNNVLMVSGTDEHGTPLLVQAD 74 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT K D+ +R + L +SYD F RTT + H+ + L+K + D G + K Sbjct: 75 KEGVTVKELADRYNRQIVEDLAGLGLSYDLFTRTTTRNHYAVVQELFKGLYDNGYMIKET 134 Query: 124 YSGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------Q 158 G S + Y GAD Q N + NPV + Sbjct: 135 TKGAISPSTGRTLPDRYIEGTCPICGADDARGDQCDNCGNQLDPVDLINPVSKINGETPE 194 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFD 215 ++E E + L + D L + E+ ++ R V+ F + L+D+ S++R D Sbjct: 195 FVETEHFMLDLPSLGDALKEWLEARQDW------RPNVLKFSLNLLEDMRPRSMTRD-ID 247 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT-------GYLDNPDGSKAKFW--PA--D 259 WGI +P +DP +YVW DA+ YL+ + G LD + FW PA Sbjct: 248 WGIPVPVEGWENDPGKKLYVWFDAVIGYLSASIEWAARSGNLD----AWKDFWQDPATRG 303 Query: 260 LHVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISK 305 + +GKD + FH+ WP LL L LP +V S F+ G K S Sbjct: 304 YYFMGKDNITFHSQIWPGELLGYAGKGTKGGQEHRLGTLNLPTEVVSSEFLTMSGSKFSS 363 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S G VI + + E G D LRYF+ D + D +R+N +LANG GNLV+R+ Sbjct: 364 SKGVVIYVKDFLAEFGPDPLRYFIAVAGPENNDTDFTWDEFVRRINNELANGWGNLVNRT 423 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 VSM K++ G +P PGA+ ESD+ IL + +R E + A+ +++ +V E + Sbjct: 424 VSMAHKNF-GEVPQPGAWNESDQRILDLAARTFGEAGAELGEAHFKNAITKIMHVVGEAN 482 Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y Q+PW+L K + +R STVL+ ++V+ +L F+P A K+ + L Sbjct: 483 AYIAEQEPWKLAKDESQRERLSTVLWTALQVVSDCNAMLTPFLPHTAQKVHETL 536 >gi|84488913|ref|YP_447145.1| methionyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091] gi|121725522|sp|Q2NI31|SYM_METST RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|84372232|gb|ABC56502.1| MetG [Methanosphaera stadtmanae DSM 3091] Length = 676 Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 142/508 (27%), Positives = 241/508 (47%), Gaps = 33/508 (6%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 KL+IS A+ Y N H+GH I AD+ AR++R+ G+D L TDEHG IA A+ Sbjct: 3 KLFISCALPYANGPCHLGHLRSTYIPADIYARYNRMTGVDTLMVCSTDEHGTPIAVRAEQ 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 K D + +IS D F RTT++ H+ + + + +KG IY+ Sbjct: 63 EKKNPKDITDIYHEIIGNDLKSCNISLDSFRRTTDEIHYKMAQDFFLDLYNKGYIYEKVI 122 Query: 125 SGWY------SLRDE-----AYYNDDEVYKGADGQYYNAQHNPVQWME------------ 161 Y SL D Y + E +G + NP +E Sbjct: 123 DQLYCDECKRSLPDRYVEGTCPYCESEGARGDQCEVCGRHLNPTDLVEPHCLICDSTPHI 182 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + Y+F+L ++ L + S+ LP +N ++ GLKD ++R +WGI Sbjct: 183 EQSKQYYFKLHEFEQPLKEWINSNEH--LPKNVKNFAKEWLNDGLKDWIMTRD-MNWGIP 239 Query: 220 IP--DDPQYIMYVWIDALTNYLTTTGYLDNP-DGSKAKFWP-ADLHVIGKDILRFHAIYW 275 +P D ++YVW +A Y ++ N D ++W +H IGKDI+ H ++W Sbjct: 240 VPLNDAEGKVLYVWAEAFEGYQSSAASWANKHDLDWKEYWDDKTVHFIGKDIIYHHTLFW 299 Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 P+ L+ LP V G++ +G K+S S G VI + +++ D LRY++V Sbjct: 300 PSMLMGRGWNLPYSVVGGGYLSLEGRKMSTSKGWVIWVEDFLKKFDSDLLRYYMVINAPL 359 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 KD + D ++RVN +L + +GN + R+ + K +DG IP G++T+ D+ Sbjct: 360 NKDTDFSWDDFQRRVNNELTDNLGNFIHRTFTFTNKFFDGKIPEMGSYTDEDKEFEEKIK 419 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 + + + N L ++SL E ++YF+ +KPW+ K + + A T + ++ +++ Sbjct: 420 ALPDVVANYIDNFQFREGLQGIMSLTKEANKYFNDKKPWKGVKEDIESAKTCINLSNQLV 479 Query: 456 RQLAILLQAFVPKLANKIFDILFVADEN 483 L+I+L ++P KI +L + E+ Sbjct: 480 HVLSIVLTPYIPISVQKIRKVLNMPTEH 507 >gi|284989481|ref|YP_003408035.1| methionyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] gi|284062726|gb|ADB73664.1| methionyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] Length = 597 Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 160/526 (30%), Positives = 242/526 (46%), Gaps = 64/526 (12%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +I TA+A+P N HIGH + +DV +R+HR+ G VL +GTDEHG I AA Sbjct: 5 HILTAVAWPYANGPRHIGHVSGFGVPSDVFSRYHRMVGDRVLMVSGTDEHGTPITVAADA 64 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ + D+N+R L +SYD F RTT H + ++ + G ++ Sbjct: 65 EGVSPREIADRNNRVIVGDLQSLGLSYDLFTRTTTGNHAAISQEIFLGLLKNGYVFPKTT 124 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNA---QHNPV--------------QW 159 G S D + Y GA G + Q +PV ++ Sbjct: 125 LGAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPVDLINPRSRINGETPKF 184 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 +EEE YF L A+ L + +S + R V++F K+ L DL T DWG Sbjct: 185 VEEEHYFLDLPAFTRSLGDWLDSRKGW------RPNVLNFAKNLLTDLKPRSYTRDIDWG 238 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW----PADLHVIGK 265 + +P D P +YVW DA+ YL+ + D + ++W + + +GK Sbjct: 239 VPVPLEGWRDRPDKRIYVWFDAVVGYLSASIEWARRSGDDDAWRQWWQTPDASAYYFMGK 298 Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FHA WPA LL N L LP +V S F+ +G K S S VI Sbjct: 299 DNIVFHAEIWPAQLLGYNGEGDKGGTPGSLGRLNLPTEVVSSEFLTMEGRKFSSSRQVVI 358 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 + + DALRYF+ +D + +R N +L G GNLV+R+VSM K Sbjct: 359 YVRDFLARYDADALRYFIAAAGPESQDTDFTWAEFLRRNNDELVAGWGNLVNRTVSMAAK 418 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 + G +PTPG T++D ++L S + E + A A+ + +V E ++Y Q Sbjct: 419 NV-GAVPTPGELTDADRALLGTTSGAFGPVGELLSRNRQKAAAAEAMRVVGEANKYLSDQ 477 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 PW+LK+ +P R TVL+ ++ + LL F+P A K+ ++L Sbjct: 478 APWKLKE-DPARRDTVLHTALQAVSDCNALLTPFLPHSAQKVHELL 522 >gi|212223727|ref|YP_002306963.1| methionyl-tRNA synthetase [Thermococcus onnurineus NA1] gi|229558528|sp|B6YUN0|SYM_THEON RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|212008684|gb|ACJ16066.1| methionyl-tRNA synthetase [Thermococcus onnurineus NA1] Length = 733 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 141/525 (26%), Positives = 252/525 (48%), Gaps = 52/525 (9%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++A+ Y N H GH A + AD+ R+ RL G +V+F +GTDEHG I A G Sbjct: 6 VTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEEVIFISGTDEHGTPITFRALKEGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + VD + + + IS+D F RT H+ + + K + + K Sbjct: 66 SPREIVDYYHEHIKTTFERAKISFDYFGRTELPVHYRISQDFFLKALENDHLIKKVSKQA 125 Query: 128 YSLRDEAYYNDDEV-----YKGADGQY--------------------YNAQHNPVQWMEE 162 Y D+ + D V Y GA+ Q N NP+ + + Sbjct: 126 YCEHDKMFLPDRYVIGTCPYCGAENQRGDQCEVCGHPLTPEELINPRCNICGNPITFRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222 Y+ ++ + +KL + +S + + +N V+ +++ GL++ +++R +WGI +P Sbjct: 186 AHYYIKMQDFAEKLKEWVQSQEHWKPNV--KNTVLGWIEEGLEERAITR-DLNWGIPVPL 242 Query: 223 DPQ----YIMYVWIDALTNYLTTTGYLDNPDGSK---AKFW------PADLHVIGKDILR 269 D + ++YVW +A Y++ T +G + KFW +H IGKD + Sbjct: 243 DDEDVKGKVLYVWFEAPIGYISITVEHLKREGKENEWKKFWLNLDGGTKVIHFIGKDNIP 302 Query: 270 FHAIYWPAFLLS----------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 FHAI+WPAFL++ A LP + ++ ++ +G+K S S I E ++ Sbjct: 303 FHAIFWPAFLMAYGKYKEEETEAEWLLPYDIPANEYLNLEGKKFSTSRNWAIWVHEFLDA 362 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 D LRY+L + +D + K ++N +L N +GN V R+++ + + +DG++P Sbjct: 363 FPADYLRYYLTAIMPETRDSDFSFADFKTKINEELVNNLGNFVHRALTFVNRYFDGVVPE 422 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 G + D + L+E E + AL +V+ L +RYFD QKPW+ K Sbjct: 423 RGELDDLDRQAFEEIEKALKETGELISTYRFKDALRRVMELAIFGNRYFDYQKPWKTAKE 482 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 N +R +T + V++++++ L +LL+ F+P + KI+ +L + + R Sbjct: 483 NRERTATTVNVSLQIVKVLGVLLEPFLPDASEKIWHLLNLEETKR 527 >gi|124027978|ref|YP_001013298.1| methionyl-tRNA synthetase [Hyperthermus butylicus DSM 5456] gi|187647727|sp|A2BLU2|SYM_HYPBU RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|123978672|gb|ABM80953.1| Methionyl-tRNA synthetase [Hyperthermus butylicus DSM 5456] Length = 572 Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 154/536 (28%), Positives = 255/536 (47%), Gaps = 49/536 (9%) Query: 9 ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++A Y N+ PH+G+ I+ ADV AR+ RL G DV+F +G+DEHG I A GV Sbjct: 6 VASAWPYVNSIPHLGNLIGSILSADVFARYLRLKGEDVVFVSGSDEHGTPIEVEAIRRGV 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 K DQ + + + IS+D++ RT H + R K+ G I++ Sbjct: 66 HPKQLTDQAHEYVKKLFEEFRISFDNYTRTENPVHKEFVREFMMKLYQNGYIFEQDDVLP 125 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQHN--------------------PVQWMEE 162 Y RD+ + D V Y G + Y + N PV++ + Sbjct: 126 YCPRDKMFLPDRFVVGTCPYCGFEKAYGDQCDNCGRLLHPTELKNPRCSICGGPVEFRKS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK--I 220 + +FF L Q+K+ + E LP +N ++ +K GLK S++R WGI Sbjct: 186 KHWFFNLPKLQEKVEKWLR---ESNLPPNVKNYSLNMLKEGLKPRSVTRDN-KWGIPAPF 241 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFW----PADLHVIGKDILRFHAI 273 P +YVW DAL Y++ T G K+W ++ IGKD + FHAI Sbjct: 242 PGAEGKTIYVWFDALLGYISATKEYGLKKGDPELWKKYWFNPETKTVYFIGKDNIPFHAI 301 Query: 274 YWPAFLLSANLP--LPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDALRYFL 329 PA L+ + P LP + + +++++GE+ SKS G ID E +E + D R+ L Sbjct: 302 ILPAMLIGSGDPYVLPSYISATEYLMYEGEQFSKSRRWGIWID--EALEILPADYWRFAL 359 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +R KD + + VN ++ + IGN V R + I + ++P PG+++++D+ Sbjct: 360 IRMRPEAKDTNFTWSEFLRIVNTEMNDDIGNYVHRVLRFIESKFGSVVPEPGSYSDADKE 419 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 + + + + +AL +VI L + ++Y + + PW+ KT+P A+T +Y Sbjct: 420 FEKAIRETPRRAEKYFEEVRLKQALGEVIELARKGNQYLNTKAPWDKIKTDPKDAATTMY 479 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQRLKPGFMLHK 501 + V + LAILL F P A +++ +L V + R Q+ + +KPG + K Sbjct: 480 LAVNSVATLAILLAPFTPDSAERLWKMLNLPGSVHEPGRWKQAGEMIIKPGHRIGK 535 >gi|169601246|ref|XP_001794045.1| hypothetical protein SNOG_03483 [Phaeosphaeria nodorum SN15] gi|160705892|gb|EAT88688.2| hypothetical protein SNOG_03483 [Phaeosphaeria nodorum SN15] Length = 1177 Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 118/344 (34%), Positives = 182/344 (52%), Gaps = 34/344 (9%) Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTF 214 V+W E Y FRLS ++DKLL +Y+++P +I P R EV+ V++GL+DLS+SR + Sbjct: 11 VEWSSETNYHFRLSFFRDKLLDFYKANPTWIAPEHRMKEVVQAVEAGLEDLSISRPYERL 70 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274 WGI++P D +YVW+DAL NY+T GY P WPAD VIGKDI+RFH IY Sbjct: 71 SWGIRVPSDDTQTIYVWLDALVNYITAAGYPWAPGRETVGGWPADCQVIGKDIVRFHCIY 130 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPAFL++ +LPLPK + +H G K+SKS G V+DP I+ G D +R+++ E Sbjct: 131 WPAFLMALSLPLPKHILTHAHWTLGGSKMSKSTGRVVDPFHAIDRFGPDVMRFYMGHEGG 190 Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 D YD + + N L N +GN+ SR +L++ + ++ V Sbjct: 191 IQDDASYDNIRIIQLYNKFLLNQLGNMASR----VLRNKKWSVKG---------AVERVG 237 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK--------------PW-ELKKT 439 +R +E +E ++ +L + S V + + D +K PW ++ Sbjct: 238 NRPAEEWQEGPGSRFWKNSLTTIASNVDQAFQLNDPRKAVRILADFVRGTSSPWAKILPF 297 Query: 440 NP----DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 P + +++ E +R + ILLQ ++P AN + D L + Sbjct: 298 GPGEPGEDVDKIIFEAAEALRMVGILLQPWMPNKANLLLDQLGI 341 >gi|256389800|ref|YP_003111364.1| methionyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] gi|256356026|gb|ACU69523.1| methionyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] Length = 605 Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 157/531 (29%), Positives = 244/531 (45%), Gaps = 71/531 (13%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 I TA+A+P N HIGH + +DV +R+ R+ G VL +GTDEHG I A Sbjct: 8 ILTAVAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNRVLMVSGTDEHGTPILVQADKE 67 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT + D+ +R + L ++YD F RTT + H+ + ++K + D G I+ Sbjct: 68 GVTARELADRYNRVIAEDLQSLGLAYDLFTRTTTRNHYAVVQEIFKGLYDNGYIFPKTTM 127 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QWM 160 G S D + Y GA G + N + +++ Sbjct: 128 GAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPDRLIDPRSRINGETPKFI 187 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDWG 217 E E +F L A+ L + + + R V+ F + L DL ++SR DWG Sbjct: 188 ETEQFFLDLPAFASVLGGWLQQQKTW------RPNVLKFSLNLLDDLQPRAISRD-LDWG 240 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--------PADL 260 + +P D P +YVW DA+ YL+ + +PD +A FW P Sbjct: 241 VPVPLEGWVDRPDKKLYVWFDAVVGYLSASVEWARRTGDPDAWRA-FWQTGPNGEAPDAY 299 Query: 261 HVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKS 306 + +GKD + FH+ WPA LL L LP +V S F+ +G K S S Sbjct: 300 YFMGKDNIVFHSEIWPAMLLGYDGRGEKNGKPGSLGALNLPHEVVSSEFLTMEGRKFSSS 359 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 VI + + DALRY++ +D + +R N +L G GNLV+R++ Sbjct: 360 RAVVIYVRDFLSRYDADALRYYITAAGPETQDTDFTWSEFLRRNNDELVAGWGNLVNRAI 419 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 SM K+ G IP T DE++L+ + + + ALA+ + LV+E ++ Sbjct: 420 SMAAKNL-GQIPAAKDLTAEDEALLATSRGAFAVVGDLLDRCRFKAALAEAMRLVAEANK 478 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y +PW+L KT+P+R +TVL+VT++V+ LL F+P + K+F +L Sbjct: 479 YVSDHEPWKLAKTDPERMATVLHVTLQVVDDAKTLLTPFLPFSSEKVFHLL 529 >gi|300088361|ref|YP_003758883.1| methionyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299528094|gb|ADJ26562.1| methionyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 556 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 149/511 (29%), Positives = 236/511 (46%), Gaps = 43/511 (8%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E++YI A Y N + H+GH A + AD+ AR+HR G +VL TG+D HG + A+ Sbjct: 3 ERIYIGAAWPYANNRLHLGHVAGAYLPADIFARYHRTRGSEVLMVTGSDRHGTPVTIRAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G + D F + L I++D + T H + + ++ K+ +K +YK Sbjct: 63 AEGKSPAEVADYYHAKFVENWSALGITFDLYTHTGTDNHREVVQDIFLKLLEKDHLYKET 122 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------Q 158 S Y + D V GA G +A P+ + Sbjct: 123 VSQPYCASCRRFLPDRYVEGTCPACGADGARGDQCDACGKPMNPSDLINIRCKLCGASPE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E E +F RLSA++ LL + E+ + P RR ++K GL+D +++R WGI Sbjct: 183 FRETEHFFLRLSAFEKPLLDWIETQADHWRPSVRRF-TYQYLKDGLRDRAITRD-ITWGI 240 Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPADL---HVIGKDI 267 +P DD + +YVW +A+ YL+ + NP+ + KFW D + IGKD Sbjct: 241 PVPLDGYDDKR--IYVWFEAVIGYLSASKEWAQRSGNPEAWR-KFWQEDCKTYYFIGKDN 297 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 + FH I WPA L+ L LP V ++ F+ + +K+SKS I + + DALR Sbjct: 298 IPFHTIIWPAILMGYGGLNLPYDVPANEFLTVEAQKLSKSRNIAIWLEDFLSRYQADALR 357 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 Y L + D + +R N +L GNLV+R +SMI K + G +P PG E Sbjct: 358 YVLSVNMPDTSDTDFSWREFVRRNNDELVATWGNLVNRVLSMIQKHFAGRVPEPGELDER 417 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 ++++ L + E + A+ ++L +E +RY D + PW+ KT+ A+ Sbjct: 418 SNAVIARAEATLNTMDEMLHACRFREAIKTAMALAAEANRYLDEKSPWKTVKTDKAAAAQ 477 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 LY + VI L F+P + K+ L Sbjct: 478 ALYTALTVISGLRTAFYPFLPFSSEKLHGFL 508 >gi|169837595|ref|ZP_02870783.1| Methionyl-tRNA synthetase [candidate division TM7 single-cell isolate TM7a] Length = 257 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 103/246 (41%), Positives = 154/246 (62%), Gaps = 8/246 (3%) Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255 +++F+K GL+DLS+SR TFDWGI + + +++YVW DALTNYLT G+ +P+ A Sbjct: 1 MVAFIKQGLQDLSISRTTFDWGIPLELEEGHVIYVWFDALTNYLTGAGFAKDPE-EFANV 59 Query: 256 WPADL--HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 W HV+GKDILRFHAI WPA L+SA + LP + +HG+ +GEK+SKSLGNV++P Sbjct: 60 WTNGTVNHVVGKDILRFHAIIWPAMLMSAGIKLPDTIAAHGWWTVEGEKMSKSLGNVVNP 119 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 E +E+ G+DA RY+L+RE G+D Y K + +R+NADLAN +GNL++R++ M K + Sbjct: 120 EEEVEKYGLDAFRYYLMREATFGQDADYSKKAMIQRINADLANDLGNLLNRTIGMQKKYF 179 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 + + D I L ++ +++ N L + +S +++Y D Sbjct: 180 NSEVVLNETEESFDAEIKEFWENTLADLDKHINNYQFSEGLKDIWKFISRMNKYID---- 235 Query: 434 WELKKT 439 ELKKT Sbjct: 236 -ELKKT 240 >gi|329915423|ref|ZP_08276269.1| Methionyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] gi|327544901|gb|EGF30259.1| Methionyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 731 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 161/518 (31%), Positives = 242/518 (46%), Gaps = 47/518 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 +L+++TA+ Y NA HIGH E I AD+ RF R+ G +V F D HG I AA NA Sbjct: 43 QLFVTTALPYANAAFHIGHIMEYIQADIWVRFQRMQGHEVHFVCADDAHGAPIMIAADNA 102 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD-IYKGCY 124 GVT + FV + + + D I +D++ T + +H + +++ + D I Sbjct: 103 GVTPQEFVARIAAGRQAPLDGFHIGFDNWHSTDGEENHALSKEIYRSLRDNAQLITTKTI 162 Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQY-------------------YNAQHNPVQWM 160 ++ + D + GA QY Y+A V M Sbjct: 163 EQFFDPVKNMFLADRYIKGECPKCGAKDQYGDSCEVCGAVYAPTELKNPYSALSGAVPVM 222 Query: 161 EE-EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK------SGLKDLSLSRKT 213 + E +FF+LS ++ + E L E N+ +++ SGL D +SR Sbjct: 223 KSSEHFFFKLSDHKCVEFLREWAFTEGRLQPEVANKAREWLEGKDDKESGLGDWDISRDA 282 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNP----DGSKAKFWPADLHVIGKDIL 268 +GI+IPD P YVW+DA YL + Y DN D A H IGKDI Sbjct: 283 PYFGIEIPDAPGKYFYVWLDAPIGYLASLKNYFDNTGRDFDAFMANPATEQYHFIGKDIT 342 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LR 326 FH ++WPA L A +P VF HGFI GEK+SKS G I P+ + ++G++ +R Sbjct: 343 YFHTLFWPAMLHFAGRKVPNNVFVHGFITVSGEKMSKSRGTGISPLRYL-DIGMNPEWMR 401 Query: 327 YFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y++ +++ +D ++ D RVN+DL N+ SRS I K +DG + T A T Sbjct: 402 YYIAAKLSAKVEDVDFNPDDFVARVNSDLIGKYVNIASRSAGFIAKRFDGHVVTDWATTS 461 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--- 442 ++ L V +I + +AL ++ V+ Y DA KPWEL K NPD Sbjct: 462 --DTFLFGLRDVANDIHALYDGREYGKALRLIMEQADRVNAYVDANKPWELAK-NPDNDA 518 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 R V +E R L + L+ +P LA ++ +L +A Sbjct: 519 RLQEVCSRLLEAFRILTLYLKPVLPALAQQVETMLAIA 556 >gi|227504173|ref|ZP_03934222.1| methionine--tRNA ligase [Corynebacterium striatum ATCC 6940] gi|227199217|gb|EEI79265.1| methionine--tRNA ligase [Corynebacterium striatum ATCC 6940] Length = 631 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 158/530 (29%), Positives = 249/530 (46%), Gaps = 65/530 (12%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E + ++ A Y N HIGH + +DV ARF R+ G +VL +GTDEHG + A Sbjct: 24 ESVVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGRNVLMVSGTDEHGTPLLVQAD 83 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT + D+ +R L +SYD F RTT + H+ + L+K + + G + K Sbjct: 84 KEGVTVRELADRYNRQIVTDLAGLGLSYDMFTRTTTRNHYSVVQELFKGLYENGYMLKET 143 Query: 124 YSGWYSLRD-----EAYYNDDEVYKGADGQYYNA------QHNPV--------------Q 158 G S + Y GADG + Q +PV + Sbjct: 144 TQGAISPSTGRTLPDRYIEGTCPICGADGARGDQCDECGNQLDPVDLINPVSKINGETPE 203 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216 ++E E + L + +D L ++ ++ ++ R V+ F + L+D+ T DW Sbjct: 204 FIETEHFLLDLPSVKDALEAWLKTREDW------RPNVLKFSLNLLEDMRPRTMTRDIDW 257 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVI 263 GI IP ++ +YVW DA+ YL+++ NPD K FW D + Sbjct: 258 GIPIPVEGWEENSAKKLYVWFDAVIGYLSSSIEWAHRTGNPDAWK-DFWQNDNARHYYFQ 316 Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WPA LL L LP ++ S ++ G K S S G Sbjct: 317 GKDNITFHSQIWPAQLLGYAGKGAKGGDLHKYGELNLPTEIVSSEYLTMSGSKFSSSKGV 376 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI + + E G DALRYF+ D + D +R+N +LANG GNLV+R+VSM Sbjct: 377 VIYVKDFLAEFGPDALRYFIAVAGPENNDTDFTWDEFVRRINNELANGWGNLVNRTVSMA 436 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 K++ G +P P A ++D++IL + N++ +A+ ++ +V E + Y Sbjct: 437 HKNF-GEVPAPAALEDADKAILQLAEDTFAAAAANLEQSKFKQAITAIMHVVGEANAYIA 495 Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A +PW+L K T +R +TVL+ ++V+ ++L F+P A K+ + L Sbjct: 496 AMEPWKLAKDETQRERLATVLWTALQVVSDCNVMLTPFLPFTAQKVHETL 545 >gi|82753356|ref|XP_727645.1| methionyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL] gi|23483588|gb|EAA19210.1| methionyl-tRNA synthetase [Plasmodium yoelii yoelii] Length = 655 Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 140/568 (24%), Positives = 265/568 (46%), Gaps = 94/568 (16%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL----FTTGTDEHGQK 57 + ++ + I+T I Y N +PHIGHAY ++ D + RF ++ + F +G DEHG K Sbjct: 80 ENKKGIIITTPIYYGNDKPHIGHAYCNVLVDTIYRFEKIKNEENKKKIIFFSGMDEHGLK 139 Query: 58 IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117 I + + +++ S ++ M ++L++ + F RT+ H + +WK + +KG Sbjct: 140 IDNKTKELNMDKNKYLNNISNFYKKMNEMLNVDINLFYRTSNLFHKTFVQNIWKYLLNKG 199 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN-----------AQHNPVQWMEEEGYF 166 IYK Y G+YS+ +E Y ++ EV K + + A N + EE YF Sbjct: 200 YIYKDVYRGYYSINEERYLSEMEVEKMENQKKEKKEKGEKDEKNIATSNIIYIEEENSYF 259 Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226 F ++ ++ L+++Y+S+ I P + E++ +++ K++ +SR +WGI IPD+ + Sbjct: 260 FNINKFKGFLINFYKSNENIISPSYLKKEIMYHIQNDFKNICISRYNTEWGIPIPDEQKG 319 Query: 227 IMYVWIDALT-----------------------------------------NYLTTTGYL 245 +YVW +AL N + T L Sbjct: 320 TIYVWFEALLSYISSIAYVIKLYYNSKDENFDLKNITQNEEGILCTYNDILNLVDTYNDL 379 Query: 246 DNPDGSK------------------AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP 287 +N + +K K W + VIGKDIL+FH I + L S + +P Sbjct: 380 NNFENNKINLSNSKMDDKNNIRNLFKKIWNPYIQVIGKDILKFHGILYICLLNSLGIKIP 439 Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 + + HG I ++ +K+SKSL N+I P ++E+ D +R + + G YD K Sbjct: 440 ENILCHGLIKNENKKMSKSLNNIISPFTLLEKYNKDVIRLYFI-----GSGNIYDDRNFK 494 Query: 348 KRVNAD----LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 ++ + L N +GNL+ R VS+ +++ +I + + + L ++ Sbjct: 495 EKNLENFEFFLRNSVGNLLYRIVSLCIENNYKIIKKNNLYNFTILNEFKNSKTYLIKLFN 554 Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463 NM+ L+ L ++I + ++++++ +PW++ N + + ++Y E I+ +I + Sbjct: 555 NMEYPLL---LEKLIMFIKKINKFYTYNEPWKI-INNSTKFNFIIYEIFESIKFFSIFMY 610 Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQ 491 F+P ++ I +N F+S+D Sbjct: 611 PFIPNISLSIL-------KNIGFESIDN 631 >gi|257057215|ref|YP_003135047.1| methionyl-tRNA synthetase [Saccharomonospora viridis DSM 43017] gi|256587087|gb|ACU98220.1| methionyl-tRNA synthetase [Saccharomonospora viridis DSM 43017] Length = 595 Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 152/524 (29%), Positives = 242/524 (46%), Gaps = 66/524 (12%) Query: 11 TAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 TA+A+P N HIGH + +DV +R+ R+ G VL +GTDEHG I A+ G+ Sbjct: 3 TAVAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNKVLMVSGTDEHGTPIQVQAEKEGL 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + D+ +R + L +SYD F RT+ H + ++ + G + +G Sbjct: 63 TPQQAADKYTRQITEDLQGLGMSYDLFTRTSTGNHAKVVQEIFLALYRNGYVVPMTTTGA 122 Query: 128 YSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QWMEE 162 S D + Y GA G + N + +++E Sbjct: 123 ISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDATELRNPRSRINGETPKFVET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKI 220 E F L A+ + L + + E+ R V++F ++ ++D+ T DWG+KI Sbjct: 183 EHLFLDLPAFTETLGRWLSTKTEW------RPNVLNFTRNLVEDMRPRPITRDLDWGVKI 236 Query: 221 P-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIGKDI 267 P D P YVW DA+ Y + + L +PD + ++W + +GKD Sbjct: 237 PLDGWRDQPMKRFYVWFDAVIGYFSASVEWARRLGDPDAWQ-QWWNNPDARGYYFMGKDN 295 Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 + FHA WPA LL N L LP ++ S F+ G K S S G VI Sbjct: 296 ITFHAQIWPALLLGHNGEGDKGGGPGPYGKLRLPDEIVSSEFLTMSGSKFSTSRGTVIYV 355 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 + + E G D LRYF+ +D + D +R+N +LAN GNLV+RS+SM K+ Sbjct: 356 HDFLREFGPDTLRYFISVAGPETQDTDFTWDEFVRRINFELANEWGNLVNRSISMAHKN- 414 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 +G IP PG T++DE + ++ + ++ A + + +VS ++Y Q+P Sbjct: 415 NGGIPRPGTPTQADEDLKALAKAAFDTVGGHLSRSRFKLAAQEAMRVVSAANKYLSDQQP 474 Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 W+LK +P+R TVL+ ++V+ LL F+P A K+ + L Sbjct: 475 WKLKD-DPERRDTVLHTALQVVSDANTLLTPFLPHAAQKVHEAL 517 >gi|227548250|ref|ZP_03978299.1| methionyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291] gi|227079673|gb|EEI17636.1| methionyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291] Length = 611 Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 165/535 (30%), Positives = 245/535 (45%), Gaps = 67/535 (12%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M + + + A Y N HIGH + +DV AR+ R+ G +VL +GTDEHG + Sbjct: 1 MTSHDNVLVCVAWPYANGPRHIGHVAGFGVPSDVFARYLRMTGHNVLMVSGTDEHGTPLL 60 Query: 60 KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 A GVT K D+ N++ D+A L +SYD F RTT + H+ + L+K + G Sbjct: 61 VQADKEGVTVKELADRYNAQIVEDLAG-LGLSYDLFTRTTTRNHYAVVQELFKGLYANGY 119 Query: 119 IYKGCYSGWYS------LRDEAYYNDDEVYKGADGQYYNAQH-----------NPV---- 157 + K G S L D + D + NPV Sbjct: 120 MVKETTRGAISPSTGRTLPDRYIEGTCPICGATDARGDQCDTCGNQLDPADLINPVSKIN 179 Query: 158 ----QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 ++++ E + L A D L + E+ ++ R V+ F + L+D+ T Sbjct: 180 GETPEFVDTEHFMLDLPALHDALKDWLETREDW------RPNVLKFSLNLLEDMRPRAMT 233 Query: 214 --FDWGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PA-- 258 DWGI IP D+P +YVW DA+ YL+ + PD KA FW PA Sbjct: 234 RDIDWGIPIPVEGWQDNPSKKLYVWFDAVVGYLSASIEWAARSGEPDAWKA-FWQDPATE 292 Query: 259 DLHVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKIS 304 + +GKD + FH+ WPA LL L LP +V S F+ G K S Sbjct: 293 GFYFMGKDNITFHSQIWPAELLGYAGKGAAGGEPGELGELNLPTEVVSSEFLTMSGSKFS 352 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 S G VI + + E G D LRYF+ D + D +RVN +LANG GNLV+R Sbjct: 353 SSKGVVIYVKDFLAEFGPDPLRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNR 412 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 +VSM K++ G +P PG +SD+ IL + R E ++ A+ +V+ +V E Sbjct: 413 TVSMAHKNF-GEVPAPGVLEDSDQRILELAERTFVEAGADLGEAKFKNAITKVMHVVGEA 471 Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + Y +PW+L K DR +TVL+ ++V+ +L F+P A ++ + L Sbjct: 472 NAYIAENEPWKLAKDPAQRDRLATVLWTALQVVSDCNAMLTPFIPHTAQRVHETL 526 >gi|306835647|ref|ZP_07468656.1| methionine--tRNA ligase [Corynebacterium accolens ATCC 49726] gi|304568491|gb|EFM44047.1| methionine--tRNA ligase [Corynebacterium accolens ATCC 49726] Length = 610 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 161/530 (30%), Positives = 248/530 (46%), Gaps = 65/530 (12%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E L ++ A Y N HIGH + +DV ARF R+ G +VL +GTDEHG + A Sbjct: 3 ESLVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGRNVLMVSGTDEHGTPLLVQAD 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ + D+ +R + L +SYD F RTT + H+ + L+K +++ G + K Sbjct: 63 KEGVSVRELADRYNRQIVNDLANLGLSYDLFTRTTTRNHYSVVQELFKGLNENGYMLKET 122 Query: 124 YSGWYSLRD-----EAYYNDDEVYKGADG----QYYNA--QHNPV--------------Q 158 G S + Y GADG Q N Q +PV Q Sbjct: 123 TKGAISPSTGRTLPDRYIEGTCPICGADGARGDQCDNCGNQLDPVDLIDPVSKINGETPQ 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216 ++E E + L + +D+L + + ++ R V+ F + L+D+ T DW Sbjct: 183 FVETEHFLLDLPSLKDELQKWLSTREDW------RPNVLKFSLNLLEDMRPRTMTRDIDW 236 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADLHVI-- 263 GI IP D+ +YVW DA+ YL+ + P+ K +FW P H Sbjct: 237 GIPIPVDGWQDNNAKKLYVWFDAVVGYLSASIEWAHRTGQPEAWK-EFWQDPETRHYYFQ 295 Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WPA LL L LP ++ S ++ G K S S G Sbjct: 296 GKDNITFHSQIWPAELLGYAGKGSKGGELHQYGELDLPTEIVSSEYLTMSGSKFSSSKGV 355 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI + + E G D LRYF+ D + D +R+N +LANG GNLV+R+VSM Sbjct: 356 VIYVKDFLAEFGPDPLRYFIAVAGPENNDADFTWDEFVRRINNELANGWGNLVNRTVSMA 415 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 K++ G +P P A E DE+IL + ++ +A+ ++ +V E + Y Sbjct: 416 HKNF-GEVPVPAALEERDEAILQLAEETFTTAGNLLEQSKFKQAIVSIMHVVGEANAYIA 474 Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +Q+PW+L K T +R +TVL+ ++V+ ++L F+P A K+ + L Sbjct: 475 SQEPWKLAKDETQRERLATVLWTALQVVSDCNVMLTPFLPFTAQKVHETL 524 >gi|296118240|ref|ZP_06836821.1| methionine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306] gi|295968798|gb|EFG82042.1| methionine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306] Length = 628 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 164/530 (30%), Positives = 248/530 (46%), Gaps = 65/530 (12%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E L ++ A Y N HIGH + +DV ARF R+ G +VL +GTDEHG + A Sbjct: 17 ESLVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGRNVLMVSGTDEHGTPLLVQAD 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ + D+ +R + L +SYD F RTT + H+ + L+ + D G + K Sbjct: 77 KEGISVRELADRYNRQIVEDLAGLGLSYDMFTRTTTRNHYAVAQELFTGLYDNGYMIKET 136 Query: 124 YSGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------Q 158 G S + Y + ADG Q N + NPV + Sbjct: 137 MQGAISPSTGRTLPDRYIEGECPICHADGARGDQCDNCGNQLDPIDLINPVSKINGETPE 196 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216 ++E E + L A D L + ++ ++ R + F + +KD+ T DW Sbjct: 197 FVETEHFLLDLPALADVLTEWLKTREDW------RPNTLKFSLNLIKDMRPRAMTRDIDW 250 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT---GYLD-NPDGSKAKFW--PADLH--VI 263 GI IP ++ +YVW DA+ YL+++ Y NPD K FW P H + Sbjct: 251 GIPIPIEGWENNDAKKLYVWFDAVIGYLSSSIEWAYRSGNPDAWK-DFWQDPEVRHYYFM 309 Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WPA LL L LP ++ S F+ G K S S G Sbjct: 310 GKDNITFHSQIWPAELLGYAGKGAKGGELHKYGELNLPTEIVSSEFLTMSGSKFSSSKGV 369 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI + ++E G DALRYF+ D + D +R+N +LANG GNLV+R+VSM Sbjct: 370 VIYVKDFLKEFGPDALRYFIAVAGPENTDTDFTWDEFVRRINNELANGWGNLVNRTVSMA 429 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 K++ G +P P TE+D ILS+ L E ++ A+ + +V E + Y Sbjct: 430 NKNF-GEVPVPATLTEADTKILSLAEETLATAAEYLEASKFKAAITAAMHVVGETNAYIA 488 Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Q+PW+L K T +R +TVL+ ++V+ ++L F+P A K+ + L Sbjct: 489 DQEPWKLAKDETQRERLATVLWTALQVVSDCNVMLTPFLPHTAQKVHETL 538 >gi|332159155|ref|YP_004424434.1| methionyl-tRNA synthetase [Pyrococcus sp. NA2] gi|331034618|gb|AEC52430.1| methionyl-tRNA synthetase [Pyrococcus sp. NA2] Length = 718 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 141/527 (26%), Positives = 257/527 (48%), Gaps = 59/527 (11%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++A+ Y N H GH A + AD+ R+ RL G DV+F GTDEHG I+ A G Sbjct: 6 VTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKEGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + VD+ + + IS+D F RT H+ + + K + G + K Sbjct: 66 SPREIVDEFHEHIKITFQRAKISFDFFGRTELPIHYKLSQEFFLKALENGHLVKKVTKQA 125 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQH--------------------NPVQWMEE 162 Y D+ + D V Y GA+ Q + P+ + + Sbjct: 126 YCEHDKMFLPDRFVIGTCPYCGAEDQKGDQCEVCGRPLTPEILINPRCAICGRPISFRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESH---PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 Y+ ++ + ++L + E+ P +N V+S+++ GL++ +++R +WGI Sbjct: 186 AHYYIKMQDFAERLKRWIENQHWKPNV------KNMVLSWIEEGLEERAITR-DLNWGIP 238 Query: 220 IP--DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW------PADLHVIGKDI 267 +P + ++YVW +A Y++ T + P+ K K+W +H IGKD Sbjct: 239 VPLEEMKDKVLYVWFEAPIGYISITIEYFRRIGKPNEWK-KYWLNLDGQTRVIHFIGKDN 297 Query: 268 LRFHAIYWPAFLLS----------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 + FHAI+WPAFL++ A LP + ++ ++ +G K S S I E + Sbjct: 298 IPFHAIFWPAFLMAYGKYKDNEVEAEWNLPYDIPANEYLTLEGRKFSTSRNWAIWVHEFL 357 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E D LRY+L + +D + K R+N +L N +GN V R+++ + + +DG++ Sbjct: 358 EVWPADYLRYYLTTIMPETRDSDFSFADFKVRINEELVNNLGNFVHRAMTFVNRYFDGVV 417 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G E D+ L+ + +E+ E + N AL +V++L S ++YFD ++PW+ Sbjct: 418 PERGELDELDKEALNEIKKTFEEVGELIMNYRFKDALKKVMNLASFGNKYFDHKQPWKTA 477 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 K + ++ +T + +++++++ L ILL+ F+P + KI+ +L + + R Sbjct: 478 KEDREKTATTVNISLQIVKALGILLEPFLPDASEKIWHLLNLEEVKR 524 >gi|19552118|ref|NP_600120.1| methionyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|62389783|ref|YP_225185.1| methionyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|25009354|sp|Q8NRZ4|SYM_CORGL RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|21323659|dbj|BAB98286.1| Methionyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|41325118|emb|CAF19599.1| METHIONYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032] Length = 610 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 161/530 (30%), Positives = 247/530 (46%), Gaps = 65/530 (12%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + + +S A Y N HIGH + +DV ARF R+ G +VL +GTDEHG + A Sbjct: 3 KNVLVSVAWPYANGPRHIGHVAGFGVPSDVFARFQRMSGNNVLMVSGTDEHGTPLLVQAD 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT + D+ +R + L +SYD F RTT H+ + L++ + D G + K Sbjct: 63 KEGVTVQDLADKYNRQIVEDLTGLGLSYDLFTRTTTSNHYAVVQELFRGLYDNGYMIKET 122 Query: 124 YSGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------Q 158 G S + Y G DG Q N + NPV + Sbjct: 123 TLGAISPSTGRTLPDRYIEGTCPICGTDGARGDQCDNCGNQLDPADLINPVSKINGETPE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFD 215 ++E E + L A + L + + ++ R V+ F + L D+ ++SR D Sbjct: 183 FVETEHFLLDLPALAEALTEWLKGREDW------RPNVLKFSLNLLDDIRPRAMSRD-ID 235 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW----PADLHVI 263 WGI IP D+ +YVW DA+ YL+ + Y + FW + + Sbjct: 236 WGIPIPVEGWQDNNAKKLYVWFDAVVGYLSASIEWAYRSGDPEAWRTFWNDPETKSYYFM 295 Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WPA LL L LP +V S F+ G K S S G Sbjct: 296 GKDNITFHSQIWPAELLGYAGKGSRGGEIGDLGVLNLPTEVVSSEFLTMSGSKFSSSKGV 355 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI + ++E G DALRYF+ D + D +RVN +LANG GNLV+R+VSM Sbjct: 356 VIYVKDFLKEFGPDALRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMA 415 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 K++ G +P PGA ESD+ IL + + + + N+ +++++ +V E + Y Sbjct: 416 HKNF-GEVPVPGALEESDKKILDLATAAFESVAANLDQSKFKAGISEIMHVVGEANAYIA 474 Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Q+PW+L K T +R +TVL+ ++V+ +L ++P A K+ + L Sbjct: 475 EQEPWKLAKDDTKRERLATVLWTALQVVSDCNTMLTPYLPHTAQKVHETL 524 >gi|297562998|ref|YP_003681972.1| methionyl-tRNA synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847446|gb|ADH69466.1| methionyl-tRNA synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 605 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 151/527 (28%), Positives = 247/527 (46%), Gaps = 64/527 (12%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +I TA+A+P N HIGH + +DV +RF R+ G VL +GTDEHG + A Sbjct: 6 HILTAVAWPYANGPRHIGHVSGFGVPSDVFSRFQRMSGNHVLMVSGTDEHGTPVQVLADQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GVT + D+ +R + L +SYD F RTT H+ + L+ + + G ++ Sbjct: 66 EGVTPRELADRYNRIIAEDLVGLGLSYDLFTRTTTGNHYAVAQQLFTALHENGYVFAHTT 125 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNA--QHNPV--------------QW 159 G S D + Y GA G Q N Q +P+ ++ Sbjct: 126 KGAVSPSTGRTLPDRYIEGICPICGYDGARGDQCDNCGNQLDPIDLISPRSRINGEKPEF 185 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WG 217 ++ E + L A+ D L ++ + + R V+ F + ++DL T D WG Sbjct: 186 VDTEHFMLDLPAFADALTTWLKGKEG-----QWRPNVLKFSLNLVEDLQPRAVTRDLNWG 240 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIG 264 + +P D+ +YVW DA+ YL+ + + P+ + ++W D + +G Sbjct: 241 VPVPLEGWSDNANKRLYVWFDAVIGYLSASVEWARRIGEPEAWR-RWWQGDEARSYYFMG 299 Query: 265 KDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNV 310 KD + FH++ WPA LL N L +P +V S F+ +G K S S V Sbjct: 300 KDNIVFHSVVWPAILLGHNGEGDRGGEPGPLGELKVPTEVVSSEFLTMEGRKFSSSRRVV 359 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 I + +E DALRY+++ +D + +R N +L GNLV+RS+SM Sbjct: 360 IYVRDFLERYSADALRYYIMAAGPETQDTDFTWAEFVRRNNDELVAAWGNLVNRSISMAA 419 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 K+ G IP G T+ D +L + E ++ L + + V+E ++Y Sbjct: 420 KNL-GEIPAAGELTDEDRRVLEDSRAAFARVGERLERSQFKAGLQEAMRTVAEANKYISD 478 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Q PW LKKT+P+R +TVL+V +++++ LL ++P+ ANK++ +L Sbjct: 479 QAPWALKKTDPERMATVLHVALQLVQDANTLLTPYLPESANKVYAML 525 >gi|145295063|ref|YP_001137884.1| methionyl-tRNA synthetase [Corynebacterium glutamicum R] gi|187647715|sp|A4QCN5|SYM_CORGB RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|140844983|dbj|BAF53982.1| hypothetical protein [Corynebacterium glutamicum R] Length = 610 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 161/530 (30%), Positives = 247/530 (46%), Gaps = 65/530 (12%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + + +S A Y N HIGH + +DV ARF R+ G +VL +GTDEHG + A Sbjct: 3 KNVLVSVAWPYANGPRHIGHVAGFGVPSDVFARFQRMSGNNVLMVSGTDEHGTPLLVQAD 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT + D+ +R + L +SYD F RTT H+ + L++ + D G + K Sbjct: 63 KEGVTVQDLADKYNRQIVEDLTGLGLSYDLFTRTTTSNHYAVVQELFRGLYDNGYMIKET 122 Query: 124 YSGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------Q 158 G S + Y G DG Q N + NPV + Sbjct: 123 TLGAISPSTGRTLPDRYIEGTCPICGTDGARGDQCDNCGNQLDPADLINPVSKINGETPE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFD 215 ++E E + L A + L + + ++ R V+ F + L D+ ++SR D Sbjct: 183 FVETEHFLLDLPALAEALTEWLKGREDW------RPNVLKFSLNLLDDIRPRAMSRD-ID 235 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW----PADLHVI 263 WGI IP D+ +YVW DA+ YL+ + Y + FW + + Sbjct: 236 WGIPIPVEGWQDNNAKKLYVWFDAVVGYLSASIEWAYRSGDPEAWRTFWNDPETKSYYFM 295 Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WPA LL L LP +V S F+ G K S S G Sbjct: 296 GKDNITFHSQIWPAELLGYAGKGSRGGEIGDLGVLNLPTEVVSSEFLTMSGSKFSSSKGV 355 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI + ++E G DALRYF+ D + D +RVN +LANG GNLV+R+VSM Sbjct: 356 VIYVKDFLKEFGPDALRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMA 415 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 K++ G +P PGA ESD+ IL + + + + N+ +++++ +V E + Y Sbjct: 416 HKNF-GEVPVPGALEESDKKILDLATAAFESVAANLDQSKFKAGISEIMHVVGEANAYIA 474 Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Q+PW+L K T +R +TVL+ ++V+ +L ++P A K+ + L Sbjct: 475 EQEPWKLAKDDTKRERLATVLWTALQVVSDCNTMLTPYLPHTAQKVHETL 524 >gi|270307759|ref|YP_003329817.1| methionyl-tRNA synthetase [Dehalococcoides sp. VS] gi|270153651|gb|ACZ61489.1| methionyl-tRNA synthetase [Dehalococcoides sp. VS] Length = 553 Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 143/514 (27%), Positives = 240/514 (46%), Gaps = 40/514 (7%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E+++I A Y N+Q H+GH A + AD+ AR+HR G +VL +G+D HG I A+ Sbjct: 3 ERIFIGVAWPYANSQLHLGHVAGAYLPADIFARYHRTRGDEVLMVSGSDMHGTPITIRAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T ++ R F L IS+D + T H T + ++ + +KG IYK Sbjct: 63 QEGITAAEVAERYHRLFMASWPKLGISWDCYTSTATANHARTAQEMFLSLYEKGYIYKDT 122 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-------QYYNAQH----------NPVQ 158 + + D V Y+GA G + NA NP + Sbjct: 123 VCQPFCPHCNRFLPDRYVEGTCPHCKYEGARGDQCDNCGKPLNAAELLNFRCKNCGNPPE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E E +F +LSA++++LL + E+ + + N + ++K GLKD +++R DWG+ Sbjct: 183 FKETEHFFLKLSAFEEELLRWVENKTHWRTNV--LNFTLRYLKEGLKDRAITRD-LDWGV 239 Query: 219 KIPDDPQY---IMYVWIDALTNYLTTT---GYLDNPDGSKAKFWPADL---HVIGKDILR 269 +P P Y +YVW +A+ YL+ + G K+W D + IGKD + Sbjct: 240 PLPL-PGYEGKRLYVWFEAVIGYLSASIEWAVAKGQPGEWQKYWGGDTKSYYFIGKDNIP 298 Query: 270 FHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH I WPA L+ + L LP V S+ ++ + +K SKS + +V+ VD LRY Sbjct: 299 FHTIIWPAMLMGKSGLNLPYDVPSNEYLTIEAQKFSKSRNKAVWVDDVLSRYSVDTLRYL 358 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L + D + +R N +L GNL R ++M+ +++ +P G E Sbjct: 359 LSANMPESSDMDFSWREFVRRNNDELVATYGNLAQRVLTMVCRNFGNKVPEYGELDERSL 418 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 +++ +L E + + A+ +SL E +RY D + PW+ K + A+ L Sbjct: 419 NLIEKTGAMLSETDKALHGCNFREAVKLAMSLAQEANRYLDEKAPWKEIKVDKAAAARSL 478 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 YV + + L + F+P+ ++++ L E Sbjct: 479 YVAMAALSGLRVAFYPFLPESSSRLSTYLGFGSE 512 >gi|84997678|ref|XP_953560.1| methionyl-tRNA synthetase [Theileria annulata] gi|65304557|emb|CAI72882.1| methionyl-tRNA synthetase, putative [Theileria annulata] Length = 573 Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 139/492 (28%), Positives = 240/492 (48%), Gaps = 43/492 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K ++ I++ + Y N PH+GHAY ++ +DVL RF L G + GTDEHG KI Sbjct: 64 KTDQRYLITSPLFYLNGPPHLGHAYTLVSSDVLKRFLILSGYECKLLVGTDEHGSKIKLT 123 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + N G + K +V+ ++ ++ DIS D + T+E H + ++ G IY+ Sbjct: 124 SSNLGYSPKQYVNLMRNHYYELYKQYDISPDIVVHTSENDHKSKVKDVFNSFVRSGFIYR 183 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 G + G++S +++ YY + ++ G + V + E YFF+LS++++KL+ +++ Sbjct: 184 GLHKGYFSPKEDLYYTESKLIDGKSPLGFE-----VSQVNEPAYFFKLSSWREKLIDFFK 238 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI-------PDDPQYI------- 227 I P EV ++S L D+++SR DWGI I D + + Sbjct: 239 E--SVIKPNHSLIEVRKSLESDLNDIAISRSNCDWGIPINIMNNGETDQNETVCNETVCN 296 Query: 228 -------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280 +YVW DAL YLT + K +HVIGKDIL FH++ WP+ L+ Sbjct: 297 ETVSNETVYVWFDALLGYLTHFNSFPQLQDQELKNLKL-IHVIGKDILTFHSLLWPSILM 355 Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + ++ +P K+ HG++L+KGEKISKSLGNV + +E D R+ L+ D Sbjct: 356 ALDIQVPIKLLVHGWLLNKGEKISKSLGNVSN----LEPQLSDVSRFALMSLGDFSSDFE 411 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQ 399 +D + L N N R S++ D ++P T +D +++ Sbjct: 412 FDSSIFDNSIKI-LRNKFANTFYRITSLLHNHKLDSVLP-----TNTDHELINKFHLYTV 465 Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459 I + M++ I + + ++ + SEV+R+ + + W + + S +L ++ ++ Sbjct: 466 NITKYMESFRIDKYIQVLMEMSSEVNRFIELNQIWTMGTCELLQISWLL---CTLLFYIS 522 Query: 460 ILLQAFVPKLAN 471 + L PKL+N Sbjct: 523 VYLSPITPKLSN 534 >gi|57234814|ref|YP_181133.1| methionyl-tRNA synthetase [Dehalococcoides ethenogenes 195] gi|123773627|sp|Q3Z9G6|SYM_DEHE1 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|57225262|gb|AAW40319.1| methionyl-tRNA synthetase [Dehalococcoides ethenogenes 195] Length = 553 Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 146/515 (28%), Positives = 242/515 (46%), Gaps = 42/515 (8%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E+++I A Y N+Q H+GH A + AD+ AR+HR G +VL +G+D HG I A+ Sbjct: 3 ERIFIGVAWPYANSQLHLGHVAGAYLPADIFARYHRTRGDEVLMVSGSDMHGTPITIRAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T ++ R F L IS+D + T H T + ++ + +KG IYK Sbjct: 63 QEGITAAEVAERYHRLFMASWPKLGISWDCYTSTATANHARTAQQMFLSLYEKGYIYKDT 122 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-------QYYNAQH----------NPVQ 158 + + D V Y+GA G + NA NP + Sbjct: 123 VCQPFCPHCNRFLPDRYVEGTCPHCKYEGARGDQCDNCGKPLNAAELLNFRCKNCGNPPE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E E +F +LSA++++L + E+ + + N + ++K GLKD +++R DWG+ Sbjct: 183 FRETEHFFLKLSAFEEELTHWVETKTYWRTNV--LNFTLRYLKEGLKDRAITRD-LDWGV 239 Query: 219 KIPDDPQY---IMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL---HVIGKDIL 268 +P P Y +YVW +A+ YL+ + PD + K+W D + IGKD + Sbjct: 240 PLPL-PGYEGKRLYVWFEAVIGYLSASIEWAASKGQPDEWQ-KYWGGDTKSYYFIGKDNI 297 Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 FH I WPA L+ L LP V S+ ++ + +K SKS I +V+ VD LRY Sbjct: 298 PFHTIIWPAMLMGRGGLDLPYDVPSNEYLTIEAQKFSKSRNKAIWVDDVLSRYSVDTLRY 357 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L + D + +R N +L GNL R ++M+ +++D +P G E Sbjct: 358 LLSANMPESSDMDFSWREFVRRNNDELVATYGNLAQRVLTMVCRNFDNKVPEYGELDERS 417 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 +++ S +L E + + A+ +SL E +RY D + PW+ K + A+ Sbjct: 418 LNLIEKTSAMLFETDKALHGCNFREAIKLAMSLAQEANRYLDEKAPWKEIKVDKAAAARS 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 LYV + + L + F+P+ ++++ L E Sbjct: 478 LYVAMAALSGLRVAFYPFLPESSSRLSTYLGFGSE 512 >gi|262182843|ref|ZP_06042264.1| methionyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] Length = 610 Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 162/530 (30%), Positives = 249/530 (46%), Gaps = 65/530 (12%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E + ++ A Y N HIGH + +DV ARF R+ G DVL +GTDEHG + A Sbjct: 3 ETVVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGNDVLMVSGTDEHGTPLLVQAD 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT + D+ +R L +SYD F RTT + H+ + L+K + + G + K Sbjct: 63 KEGVTVRELADRYNRQIVTDLAGLGLSYDLFTRTTTRNHYAVVQELFKGLYENGYMIKET 122 Query: 124 YSGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------Q 158 G S + Y GADG Q N + NPV + Sbjct: 123 TQGAISPSTGRTLPDRYIEGTCPLCGADGARGDQCDNCGNQLDPVDLINPVSKINGETPK 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216 +++ E + L A +D L + ++ ++ R V+ F + L+D+ T DW Sbjct: 183 FIDTEHFLLDLPAVKDVLEEWLKTREDW------RPNVLKFSLNLLEDMRPRTMTRDIDW 236 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADLHVI-- 263 GI IP D+ +YVW DA+ YL+++ NPD K +W P H Sbjct: 237 GIPIPVEGWEDNGAKKLYVWFDAVIGYLSSSIEWAHRTGNPDAWK-DYWQNPQARHYYFQ 295 Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WPA LL L LP ++ S ++ G K S S G Sbjct: 296 GKDNITFHSQIWPAELLGYAGKGSKGGELHTYGELNLPTEIVSSEYLTMSGSKFSSSKGV 355 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI + + E G DALRYF+ D + D +R+N +LANG GNLV+R+VSM Sbjct: 356 VIYVKDFLAEFGPDALRYFIAVAGPENNDTDFTWDEFVRRINNELANGWGNLVNRTVSMA 415 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 K++ G +P P A ++D+ IL++ E ++ +A+ ++ +V E + Y Sbjct: 416 HKNF-GEVPAPAALEQADKDILALAEETFTTAAEFLEQSKFKQAMTAIMHVVGEANAYVA 474 Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A +PW+L K T +R +TVL+ ++V+ ++L F+P A K+ + L Sbjct: 475 AMEPWKLAKDETQRERLATVLWTALQVVSDCNVMLTPFLPFTAQKVHETL 524 >gi|227832672|ref|YP_002834379.1| Methionyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] gi|227453688|gb|ACP32441.1| Methionyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] Length = 617 Score = 202 bits (515), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 162/530 (30%), Positives = 249/530 (46%), Gaps = 65/530 (12%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E + ++ A Y N HIGH + +DV ARF R+ G DVL +GTDEHG + A Sbjct: 10 ETVVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGNDVLMVSGTDEHGTPLLVQAD 69 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT + D+ +R L +SYD F RTT + H+ + L+K + + G + K Sbjct: 70 KEGVTVRELADRYNRQIVTDLAGLGLSYDLFTRTTTRNHYAVVQELFKGLYENGYMIKET 129 Query: 124 YSGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------Q 158 G S + Y GADG Q N + NPV + Sbjct: 130 TQGAISPSTGRTLPDRYIEGTCPLCGADGARGDQCDNCGNQLDPVDLINPVSKINGETPK 189 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216 +++ E + L A +D L + ++ ++ R V+ F + L+D+ T DW Sbjct: 190 FIDTEHFLLDLPAVKDVLEEWLKTREDW------RPNVLKFSLNLLEDMRPRTMTRDIDW 243 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADLHVI-- 263 GI IP D+ +YVW DA+ YL+++ NPD K +W P H Sbjct: 244 GIPIPVEGWEDNGAKKLYVWFDAVIGYLSSSIEWAHRTGNPDAWK-DYWQNPQARHYYFQ 302 Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WPA LL L LP ++ S ++ G K S S G Sbjct: 303 GKDNITFHSQIWPAELLGYAGKGSKGGELHTYGELNLPTEIVSSEYLTMSGSKFSSSKGV 362 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI + + E G DALRYF+ D + D +R+N +LANG GNLV+R+VSM Sbjct: 363 VIYVKDFLAEFGPDALRYFIAVAGPENNDTDFTWDEFVRRINNELANGWGNLVNRTVSMA 422 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 K++ G +P P A ++D+ IL++ E ++ +A+ ++ +V E + Y Sbjct: 423 HKNF-GEVPAPAALEQADKDILALAEETFTTAAEFLEQSKFKQAMTAIMHVVGEANAYVA 481 Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A +PW+L K T +R +TVL+ ++V+ ++L F+P A K+ + L Sbjct: 482 AMEPWKLAKDETQRERLATVLWTALQVVSDCNVMLTPFLPFTAQKVHETL 531 >gi|284033605|ref|YP_003383536.1| methionyl-tRNA synthetase [Kribbella flavida DSM 17836] gi|283812898|gb|ADB34737.1| methionyl-tRNA synthetase [Kribbella flavida DSM 17836] Length = 585 Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 156/524 (29%), Positives = 245/524 (46%), Gaps = 64/524 (12%) Query: 7 LYISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++I A+A+P N HIGH + ADV +R+ R+ G DVL +GTDEHG I A+ Sbjct: 2 VHILAAVAWPYANGPRHIGHVSGFGVPADVFSRYQRMAGNDVLMVSGTDEHGTPILVQAE 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ + D+ +R + L +SYD F RTT H+ + L++ + G + Sbjct: 62 REGVSPRELADRYNRMIVEDLHGLGLSYDLFTRTTTGNHYAVAQELFRTVHRNGYLVPRT 121 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN------------------PV 157 G S D + Y A G + N PV Sbjct: 122 AMGAISPSTGRTLPDRYIEGTCPICGYDAARGDQCDNCGNQLDAIDLREPRSRINGETPV 181 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215 ++E E +F L A D L S+ ++ ++ R V+ F + L D+ T D Sbjct: 182 -FVETEHFFLDLPALADALGSWLQTRTDW------RPNVLKFALNLLDDVRPRAITRDID 234 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HV 262 WGI +P ++P +YVW DA+ YL+ + +PD +A +W P L + Sbjct: 235 WGIPVPLPGWQENPAKRLYVWFDAVIGYLSASIEWARRTGDPDAWRA-WWCDPTALSYYF 293 Query: 263 IGKDILRFHAIYWPAFLLSANLP---------LPKKVFSHGFILHKGEKISKSLGNVIDP 313 +GKD + FHA WPA LL N P LP +V S F+ +G K S S VI Sbjct: 294 MGKDNITFHAQIWPAELLGYNTPNPGRYGALNLPTEVVSSEFLTMEGRKFSSSRSVVISV 353 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 V+E G DALRYF+ +D + +R N +L GNLV+R+ SMI K++ Sbjct: 354 RHVLERYGPDALRYFVAAAGPESQDTDFTWAEFVRRTNDELVGTWGNLVNRTASMIAKNF 413 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 G IP G T +D +L+ + E++++ + +A+ + + +E ++Y Q P Sbjct: 414 -GAIPAAGELTTADHELLARSRAAFGTVGEHLEHHRLRQAVGAALRVATEANQYLSQQAP 472 Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 W K+++P R T+L+V +V+ +LL F+P A ++ + L Sbjct: 473 W--KQSDPVRQGTILHVAAQVVADSNVLLTPFLPHSAQQVHETL 514 >gi|18977402|ref|NP_578759.1| methionyl-tRNA synthetase [Pyrococcus furiosus DSM 3638] gi|25009366|sp|Q8U221|SYM_PYRFU RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|18893089|gb|AAL81154.1| methionyl-tRNA synthetase [Pyrococcus furiosus DSM 3638] Length = 724 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 140/519 (26%), Positives = 250/519 (48%), Gaps = 55/519 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 ++ A+ Y N H GH A + AD+ R+ RL G DV+F GTDEHG I+ A N Sbjct: 6 VTAALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALNEKR 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + VD+ + + + IS+D F RT H+ + + K + G + K Sbjct: 66 SPREIVDEFHEHIKTAFQRVKISFDYFGRTELPVHYRLSQEFFLKALENGYLVKKVTKQA 125 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQH--------------------NPVQWMEE 162 Y D+ + D V Y GA+ Q + NP+ + E Sbjct: 126 YCEHDKRFLPDRFVIGTCPYCGAENQRGDQCEVCGRPLTPEILIEPRCAFCKNPITFRES 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222 Y+ ++ +++KL + + E +N V+ +++ GL++ +++R DWGI +P Sbjct: 186 THYYIKMQEFEEKLKEWIK---EKDWKPNVKNMVLGWIEEGLEERAITR-DLDWGIPVPL 241 Query: 223 DPQ----YIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW------PADLHVIGKDIL 268 D + ++YVW +A Y++ T + P+ K K+W +H IGKD + Sbjct: 242 DEEDMKNKVLYVWFEAPIGYISLTIEYFKRIGKPNEWK-KYWLNLDGQTRVIHFIGKDNI 300 Query: 269 RFHAIYWPAFLLS----------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 FHAI+WPAFL++ A LP + ++ ++ +G+K S S I E ++ Sbjct: 301 PFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWIHEFLD 360 Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 D LRY+L + +D + K ++N +L N +GN V R+++ + + +DG++P Sbjct: 361 VFPADYLRYYLTSIMPETRDSDFSFAEFKTKINEELVNVLGNFVYRALTFVNRYFDGIVP 420 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 G E D L + +E+ + ++ AL +V++L +RYFD ++PW+ K Sbjct: 421 ERGELDELDRQALEEIEKTFEEVGKLIREYRFKDALKKVMNLAGFGNRYFDYKEPWKTIK 480 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + R T + +++++++ L ILL+ F+P + KI+ L Sbjct: 481 EDKTRTGTTINISLQIVKALGILLEPFLPDASEKIWHFL 519 >gi|146298619|ref|YP_001193210.1| methionyl-tRNA synthetase [Flavobacterium johnsoniae UW101] gi|187647752|sp|A5FLM7|SYM_FLAJO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|146153037|gb|ABQ03891.1| methionyl-tRNA synthetase [Flavobacterium johnsoniae UW101] Length = 711 Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 159/534 (29%), Positives = 250/534 (46%), Gaps = 44/534 (8%) Query: 1 MKEREKLY-ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58 M + K Y I+ A+ Y N HIGH A + AD+ +R+ RL G DV F G+DEHG I Sbjct: 1 MTQNPKRYTITAALPYTNGPIHIGHLAGVYVPADIYSRYLRLQGKDVAFICGSDEHGVAI 60 Query: 59 AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 + A+ GVT + +D+ R IS++++ RT+ K HHDT ++ + DKGD Sbjct: 61 SMKAKKEGVTPQEVIDKYDGIIRKSFADFGISFNNYSRTSAKIHHDTASEFFRTLYDKGD 120 Query: 119 IYKGCYSGWYSLRDEAYYND-----------------DEVYKGADGQYYNAQH--NPVQW 159 + Y + + D D+ K G NA NP Sbjct: 121 FIEEVTEQLYDAKANQFLADRFVVGTCPKCDNPEAYGDQCEKC--GSTLNATDLINPKST 178 Query: 160 M--------EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLS 210 + E + +F L Y D L + E H P +V S++ GL+ +++ Sbjct: 179 ITGETPILKETKHWFLPLDRYSDFLTKWILEGHKNDWKP-NVYGQVKSWIDGGLEPRAVT 237 Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVI 263 R DWGI +P + +YVW DA Y+++T +G +W + +H I Sbjct: 238 RD-LDWGIDVPVEGAEGKKLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDEETKLVHFI 296 Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320 GKD + FH I +PA L + + LP V ++ F+ +G K+S S + E +EE Sbjct: 297 GKDNIVFHCIIFPAMLKAEGSYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEEFPD 356 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D LRY L KD + + R N +L GN V+R V + K YDG+IPTP Sbjct: 357 KQDVLRYALTSNAPETKDNDFTWKDFQARNNNELVAIFGNFVNRVVVLTNKYYDGVIPTP 416 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 FTE DE L+ I +++ AL +++++ ++Y ++PW++ K N Sbjct: 417 NEFTEIDEQTLAELKAYPAVISSSVERYRFREALGELMNVARLGNKYLADEEPWKVMKDN 476 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494 P+R T +YV +++ L++L + F+P A K+ IL + D F+ + LK Sbjct: 477 PERVKTQMYVALQIAAALSVLAEPFLPFTAAKLSKILNLGDLKEHFEGFSKFLK 530 >gi|331694702|ref|YP_004330941.1| methionyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] gi|326949391|gb|AEA23088.1| Methionyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] Length = 597 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 155/526 (29%), Positives = 241/526 (45%), Gaps = 66/526 (12%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + TA+A+P N HIGH + +DV +R+ R+ G VL +GTDEHG I A Sbjct: 5 VLTAVAWPYANGPRHIGHVSGFGVPSDVFSRYRRMVGDQVLMVSGTDEHGTPIQVQADAE 64 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + D+ N RD+ L +SYD F RTT H++ + L+ + G + Sbjct: 65 GLTPRQLADKYNEVITRDLQG-LGLSYDLFTRTTTSNHYEVVQNLFLALHKNGYVVSKTA 123 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159 G S D V Y GA G + N + Q+ Sbjct: 124 MGAISPSTGRTLPDRYVEGTCPICGYDGARGDQCDNCGNQLDPADLINPRSKINGEVPQF 183 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 +E E +F L A+ + L + + ++ R V+ F + ++DL T DWG Sbjct: 184 VETEHFFLDLPAFAESLGQWLSTRTDW------RPNVLKFSANLVEDLKPRAITRDLDWG 237 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT--GYLDNPDGSKAKFWPAD-----LHVIGK 265 + IP D P +YVW DA+ YL+ + +PD K W D + +GK Sbjct: 238 VPIPLDGWRDQPMKRLYVWFDAVIGYLSASVEWARRSPDPDAWKQWWTDPSAEGYYFMGK 297 Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FH++ WPA LL N L LP ++ S ++ G K S S G VI Sbjct: 298 DNIVFHSVIWPALLLGQNGAGDRGGEPGVFGTLNLPSEIVSSEYLTMSGSKFSTSRGRVI 357 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 + + E G DALRYF+ +D + D +R N +LAN GNLV+RS+SM K Sbjct: 358 YVGDFLREFGPDALRYFIAVAGPENQDTDFTWDEFVRRTNFELANEWGNLVNRSISMAHK 417 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 + G IP P A +D +L+V + + +A + + +V+ +RY Q Sbjct: 418 NV-GAIPKPLAPEAADAELLAVSRAGFDTVGGLLARNRFKQAAGEAMRVVTAANRYLSDQ 476 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +PW+ +K +P+R T+L+ ++V++ LL F+P A ++ + L Sbjct: 477 EPWK-RKDDPERRDTILHTALQVVQDANTLLTPFLPHAAQQVHEAL 521 >gi|148642131|ref|YP_001272644.1| methionyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061] gi|222444690|ref|ZP_03607205.1| hypothetical protein METSMIALI_00303 [Methanobrevibacter smithii DSM 2375] gi|261350771|ref|ZP_05976188.1| methionine--tRNA ligase [Methanobrevibacter smithii DSM 2374] gi|187647750|sp|A5UJ98|SYM_METS3 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|148551148|gb|ABQ86276.1| methionyl-tRNA synthetase, MetG [Methanobrevibacter smithii ATCC 35061] gi|222434255|gb|EEE41420.1| hypothetical protein METSMIALI_00303 [Methanobrevibacter smithii DSM 2375] gi|288860526|gb|EFC92824.1| methionine--tRNA ligase [Methanobrevibacter smithii DSM 2374] Length = 660 Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 139/502 (27%), Positives = 245/502 (48%), Gaps = 34/502 (6%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQ 63 K++IS A+ Y N H+GH + AD+ AR++R+ DVL TDEHG IA KA + Sbjct: 3 KIFISCALPYANGPCHLGHIRSTYLPADIYARYNRMIDNDVLLVCATDEHGTPIAVKADK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 ++ + RD+ + ++IS D+F RTT+ H++ + + ++ +KG IYK Sbjct: 63 ENKKPIEIAKRYHDMIVRDV-ESMNISLDNFTRTTDDLHYEIAQNFFLELYNKGLIYKKD 121 Query: 124 YSGWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWMEEEG--------- 164 Y + + D V +G + P + E + Sbjct: 122 IQQLYCEKCNKFLPDRYVEGICPVCGSEARGDHCEKCGRALEPTELDEPKCLTCGSTPVI 181 Query: 165 -----YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 YFF+LS ++D L Y +++ LP RN +++K GL D L+R DWGI Sbjct: 182 KDTYQYFFKLSEFEDDLKDYIDNNEN--LPANVRNYAKNWLKEGLNDWVLTR-DMDWGIP 238 Query: 220 IPDDPQY--IMYVWIDALTNYLTTTGYLDNPDGSK-AKFW-PADLHVIGKDILRFHAIYW 275 +P D ++YVW++A Y+++ G K +W +H IGKDI+ H+I+W Sbjct: 239 LPLDEAKGKVLYVWVEAFLGYISSAAQWSRETGIKWEDYWNDTAIHFIGKDIIYHHSIFW 298 Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 P L + LP +++ F+ +GEK+S S V+ + +++ D LRY+L Sbjct: 299 PGLLKAYGCKLPDNIYAGEFLSLEGEKMSTSKNWVVWIADFVDKFDPDLLRYYLTINAPL 358 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 KD + D ++R N +LA+ IGN + R+ + K +DG IP + D + Sbjct: 359 NKDTDFSWDDFQRRNNDELADVIGNFLHRTFTFTHKFFDGEIPEYKNPSAEDNKFKEIIE 418 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 ++ + E + + L ++ + ++YF+ Q+PW+ K + +A+ LY++ ++ Sbjct: 419 KLPDTVGEYISDFEFRDGLLEIYRVAKIGNKYFNDQEPWKAVKEDMQKAANCLYLSNQLA 478 Query: 456 RQLAILLQAFVPKLANKIFDIL 477 + LA +L+ ++P A+ I I+ Sbjct: 479 KTLAYVLKPYIPNKADAIAKII 500 >gi|91786826|ref|YP_547778.1| methionyl-tRNA synthetase [Polaromonas sp. JS666] gi|123060257|sp|Q12F12|SYM_POLSJ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|91696051|gb|ABE42880.1| methionyl-tRNA synthetase [Polaromonas sp. JS666] Length = 689 Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 161/526 (30%), Positives = 242/526 (46%), Gaps = 58/526 (11%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +R +L+++TA+ Y N HIGH E I AD+ R+ R+ G +V F D HG I Sbjct: 1 MSQR-RLFVTTALPYANGNFHIGHIMEYIQADIWVRYQRMQGHEVNFVGADDAHGAPIMI 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ AG T + FV + + D IS+D++ T +H + ++ + G I Sbjct: 60 AAEKAGKTPQQFVADIAAGRKPYLDGFHISFDNWHSTDGPENHQLAQQIYLDLKKAGLIE 119 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM-------- 160 ++ D+ + D KG A QY A + P + Sbjct: 120 TKTVEQFFD-PDKNMFLPDRFIKGQCPKCGAKDQYGDNCEVCGAVYAPTDLINPYSALSG 178 Query: 161 ------EEEGYFFRLSA----------YQDKLLSYYESHP--EFILPIERRNEVISFVKS 202 E +FFRLS QD +L ++ E+ P R V Sbjct: 179 ATPVLKSSEHFFFRLSDPRCVAFLEQWTQDGMLQTEVANKVKEWFSP---RQNVDGTTSE 235 Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--- 259 GL D +SR +GI+IPD P YVW+DA YL + L + G + AD Sbjct: 236 GLDDWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDKKGLDYDAYMADPGL 295 Query: 260 --LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEV 316 H IGKDI+ FH ++WPA L + P VF HGF+ ++ GEK+SKS G +DP++ Sbjct: 296 EQYHFIGKDIITFHTLFWPAMLHFSGRKTPDNVFVHGFLTVNNGEKMSKSRGTGLDPLKY 355 Query: 317 IEEVGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 + +G++ LRY+L ++ A +D ++ + RVNADL N+ SR+ I K + Sbjct: 356 L-NLGMNPEWLRYYLAAKLNARNEDIDFNPEDFMARVNADLVGKYINIASRAAGFISKRF 414 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 DG + P A ++ +L S +QE+ + +AL +V+ L V+ Y D KP Sbjct: 415 DGRLGEPSADGDALLEVLRGASPAIQELYAERE---YGKALREVMQLADRVNGYVDQNKP 471 Query: 434 WELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 WEL K A V V +E R L I L+ +P L ++ D L Sbjct: 472 WELAKQPGMEARLLDVCTVCIEAFRLLTIYLKPVLPALGTQVEDFL 517 >gi|213966064|ref|ZP_03394252.1| methionyl-tRNA synthetase [Corynebacterium amycolatum SK46] gi|213951262|gb|EEB62656.1| methionyl-tRNA synthetase [Corynebacterium amycolatum SK46] Length = 608 Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 161/530 (30%), Positives = 257/530 (48%), Gaps = 71/530 (13%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 I TA+A+P N HIGH + +DV AR+ R+ G DVL +GTDEHG + A+ Sbjct: 4 IFTAVAWPYANGPRHIGHVAGFGVPSDVFARYQRMVGNDVLMVSGTDEHGTPLLVQAEKE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ + D+ +R +D+A L +SYD F RTT + H+ + L++ + + G + K Sbjct: 64 GVSVQELADRYNRQIVKDLAG-LGLSYDLFTRTTTRNHYVVVQELFRGLYENGYMVKQTT 122 Query: 125 SGWYSLRD-----EAYYNDDEVYKGADGQYYNAQHN------------PV--------QW 159 G S + Y GA G + N PV ++ Sbjct: 123 MGAISPSTGRTLPDRYIEGTCPICGASGARGDQCDNCGNQLDPADLIDPVSKINGETPKF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDW 216 +E E + L A + L + + ++ R V+ F + LKD+ ++SR DW Sbjct: 183 VETEHFLLDLPALAEALTEWLQERKDW------RPNVLKFSLNILKDIRPRAMSRD-IDW 235 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HVI 263 G+ IP ++ +YVW DA+ YL+ + + +P+ + K+W P L + + Sbjct: 236 GVPIPLEGWSENGTKKLYVWFDAVVGYLSASIEWAWRIGDPEAWR-KWWNDPEALSYYFM 294 Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WPA LL L LP +V S ++ G K S S G Sbjct: 295 GKDNITFHSQIWPAELLGYRGEGSRGGEVGQLGELNLPTEVVSSEYLTMSGSKFSSSKGV 354 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI + + E G D LRYF+ +D + D +RVN +LAN GNLV+R+VSM Sbjct: 355 VIYVKDFLAEFGPDPLRYFIAMAGPENQDTDFTWDEFVRRVNNELANSWGNLVNRTVSMA 414 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 K++ G +PTPG T++D +L + R E+ + + + + LV E + Y Sbjct: 415 FKNF-GEVPTPGELTDADRELLDLAERSFAEVGDALALSRFRAGITAAMHLVGEANAYIA 473 Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 AQ+PW+L K + +R +TVL+ ++V+ +LL ++P+ A K+F+ L Sbjct: 474 AQEPWKLAKDESQRERLATVLWTALQVVSDANVLLTPYLPESAQKVFETL 523 >gi|229819468|ref|YP_002880994.1| methionyl-tRNA synthetase [Beutenbergia cavernae DSM 12333] gi|259511556|sp|C5C046|SYM_BEUC1 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|229565381|gb|ACQ79232.1| methionyl-tRNA synthetase [Beutenbergia cavernae DSM 12333] Length = 614 Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 151/538 (28%), Positives = 243/538 (45%), Gaps = 76/538 (14%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +I +A+A+P N HIGH + +DV +R+ R+ G DVL +GTDEHG I A+ Sbjct: 3 HILSAVAWPYTNGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVLAEQ 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GVT + D+ +R D L +SYD F RTT + H+ + +++ + G + + Sbjct: 63 EGVTPQELTDRYNRVIVDDLANLGLSYDLFTRTTTRNHYAVVQEMFRTVHKNGYMVEQTT 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159 G S D + Y GA G + N + + Sbjct: 123 MGAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDAVDLINPRSRINGEKPTF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 +E + +F L A D L ++ + + R V++F + L DL T DWG Sbjct: 183 IETQHFFLDLPALADALGAWLRTRTHW------RPNVLNFSLNLLDDLRPRAMTRDIDWG 236 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT-----------GYLDNPDGSKAKFW----P 257 I +P D+P +YVW DA+ YL+ + G PD + W P Sbjct: 237 IPVPLPGWEDNPAKRLYVWFDAVIGYLSASIEWARRQELAAGGAGTPDAEAWRAWWNPTP 296 Query: 258 A----DLHVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHK 299 + +GKD + FH+ WPA LL L LP +V S F+ + Sbjct: 297 GLDQQSYYFMGKDNITFHSQIWPAELLGYAGKGSRGGEPGIYGELNLPTEVVSSEFLTTE 356 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G++ S S G V+ +++ DALRYF+ D + K+R N +L G G Sbjct: 357 GKQFSTSRGVVVYVRDMLARYQPDALRYFIAVAGPESSDSDFTWSEFKRRTNDELVAGWG 416 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 NLV+R+ +M+ K++ G +P PG DE++L+ ++ ++ Q A+ + + Sbjct: 417 NLVNRTATMVHKNF-GAVPEPGERLAVDEAVLATTRAGFAQVGRLLETQRQRAAVTEAMR 475 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +V EV++Y +PW+L KT+ DR +TVL+ + + +LL F+P A +I L Sbjct: 476 VVGEVNKYVSETEPWKL-KTDRDRLATVLHTATQAVADCNVLLAPFLPHAAQEIHSAL 532 >gi|134094215|ref|YP_001099290.1| methionyl-tRNA synthetase [Herminiimonas arsenicoxydans] gi|187647726|sp|A4G3S6|SYM_HERAR RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|133738118|emb|CAL61163.1| methionine tRNA synthetase (Methionine--tRNA ligase) (MetRS) [Herminiimonas arsenicoxydans] Length = 710 Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 151/526 (28%), Positives = 248/526 (47%), Gaps = 54/526 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL+++TA+ Y N HIGH E I AD+ RF R+ G V F D HG I AA+ A Sbjct: 8 KLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGNQVDFVGADDAHGAPIMIAAEKA 67 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + FV + + D I++D++ T +H + ++ + G I Sbjct: 68 GLTPQQFVSNIAAGRKQYLDGFHIAFDNWSSTDSPENHQLAQQIYLDLKKAGLIASKTVE 127 Query: 126 GWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME------------- 161 ++ + D E K G + + A ++P + Sbjct: 128 QFFDPEKNMFLPDRYIKGECPKCHTKDQYGDNCEVCAAVYSPTDLINPYSALTGATPVLK 187 Query: 162 -EEGYFFRLS-----AYQDKLLSYYESHPEFILPIERRNEVISF----------VKSGLK 205 E +FF LS A+ ++ +S ++ + L E N+V + + GL Sbjct: 188 HSEHFFFTLSDPRCVAFLEEWVSGLDTDGKTHLQAEVANKVKEWFSARTNPDGTISEGLN 247 Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL-----DNPDGSKAKFWPADL 260 D +SR +GI+IPD P YVW+DA YL + L +N D A+ + Sbjct: 248 DWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDKRGENFDAYMAEPALEQI 307 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEE 319 H IGKDI+ FH ++WPA L + P KVF HGF+ ++ GEK+SKS G +DP++ + Sbjct: 308 HFIGKDIVNFHTLFWPAMLKFSGRKTPNKVFVHGFLTVNNGEKMSKSRGTGLDPLKYL-S 366 Query: 320 VGVDA--LRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 +G++ LRY+L +++ +D ++ + RVN+DL N+ SR+ I K +DG Sbjct: 367 LGMNPEWLRYYLANKLSARNEDIDFNPEDFIARVNSDLIGKYVNIASRAAGFIAKKFDGR 426 Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 + + + +D+ +S V EI+ + +AL ++ ++ Y DA KPWEL Sbjct: 427 VVS--DWATADDVFISKLRNVASEIQALYDQREYGKALRTIMEQADAINAYVDANKPWEL 484 Query: 437 KKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 K + A+ V +E R L I L+ +P+LA ++ +L +A Sbjct: 485 AKKPENSAALQEVCSRLLEAFRILTIYLKPVLPELAKQVEALLNIA 530 >gi|242398126|ref|YP_002993550.1| Methionyl-tRNA synthetase [Thermococcus sibiricus MM 739] gi|242264519|gb|ACS89201.1| Methionyl-tRNA synthetase [Thermococcus sibiricus MM 739] Length = 732 Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 142/530 (26%), Positives = 246/530 (46%), Gaps = 52/530 (9%) Query: 4 REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + +++A+ Y N H GH A + AD+ R+ RL G DV+F GTDEHG I A Sbjct: 5 RMRFTVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPITFRA 64 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G + + VD + + + IS+D F RT H+ + + K + + K Sbjct: 65 LKEGKSPREIVDYYHEHIKTTFERAKISFDYFGRTELPVHYRISQEFFLKALENEYLIKK 124 Query: 123 CYSGWYSLRDEAYYNDDEV-----YKGADGQY--------------------YNAQHNPV 157 Y D+ + D V Y GA+ Q N N + Sbjct: 125 VEKQAYCEHDKMFLPDRYVIGTCPYCGAEEQRGDQCEVCGHPLTPEKLINPKCNICGNSI 184 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + + Y+ R+ +Q+KL + + + RN V+ ++ GL++ +++R WG Sbjct: 185 TFRDSAHYYIRMQEFQEKLKDWVLRQEHWKSNV--RNTVLGWINEGLEERAITR-DLGWG 241 Query: 218 IKIP----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD-----LHVIG 264 I +P D ++YVW +A Y++ T L D K ++ D +H IG Sbjct: 242 IPVPLEDEDVKGKVLYVWFEAPIGYISITIEHFKKLGKEDEWKKYWFNIDGETRVIHFIG 301 Query: 265 KDILRFHAIYWPAFLLSAN----------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 KD + FHAI+WPAFL++ LP + ++ ++ +G K S S I Sbjct: 302 KDNVPFHAIFWPAFLMAYGKYKDEKGEFEWNLPYDIPANEYLNLEGRKFSTSRNWAIWVH 361 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374 E ++ D LRY+L + +D + KK++N +L N +GN V R+++ + + +D Sbjct: 362 EFLDAFPADYLRYYLTAIMPETRDSDFSLGDFKKKINEELVNNLGNFVHRALTFVNRYFD 421 Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 G +P G + D L + +E+ + AL +V++L ++YFD Q+PW Sbjct: 422 GKVPETGELDDLDRKALKEIEKTFEEVNRLISRYQFKEALKRVMALAIFGNQYFDYQRPW 481 Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + KT+ R T + V++++++ L ILL+ F+P + KI+ +L + + R Sbjct: 482 KTAKTDKVRTGTTINVSLQIVKALGILLEPFLPDASEKIWHLLNIEEVKR 531 >gi|305681838|ref|ZP_07404642.1| methionine--tRNA ligase [Corynebacterium matruchotii ATCC 14266] gi|305658311|gb|EFM47814.1| methionine--tRNA ligase [Corynebacterium matruchotii ATCC 14266] Length = 630 Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 163/549 (29%), Positives = 254/549 (46%), Gaps = 86/549 (15%) Query: 6 KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + ++ A Y N HIGH + +DV AR+ R+ G +VL +GTDEHG + A Sbjct: 3 NVLVNVAWPYANGPRHIGHVAGFGVPSDVFARYQRMTGANVLMVSGTDEHGTPLLVQADK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ D+ +R + L +SYD F RTT + H+ + L++ + D G + K Sbjct: 63 EGVSVTELADRYNRQIVEDLAGLGLSYDLFTRTTTRNHYAIVQELFRGLYDNGYMLKETT 122 Query: 125 SGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------QW 159 G S + Y GADG Q N + NPV ++ Sbjct: 123 MGAISPSTGRTLPDRYIEGTCPICGADGARGDQCDNCGNQLDPADLINPVSKINGETPKF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDW 216 +E E + L A ++L ++ ++ ++ R V+ F + L D+ ++SR DW Sbjct: 183 VETEHFLLDLPALAEELTAWLQTRNDW------RPNVLKFSLNLLSDIRPRAMSRD-IDW 235 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PA--DLHVI 263 GI IP D+P +YVW DA+ YL+ + NPD + FW PA + + Sbjct: 236 GIPIPVEGWEDNPGKKLYVWFDAVVGYLSASIEWAHRSGNPDAWR-DFWTDPAATSYYFM 294 Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WP LL L LP +V S F+ G K S S G Sbjct: 295 GKDNITFHSQIWPGELLGYQGKGAKGGTLHRLGALNLPTEVVSSEFLTMSGSKFSSSKGV 354 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI + ++E G D LRYF+ +D + D +R+N +LANG GNLV+R VSM Sbjct: 355 VIYVKDFLKEFGPDPLRYFIAVAGPENQDTDFTWDEFVRRINNELANGWGNLVNRVVSMA 414 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 ++ G +PTPG TE+D+ IL + + + E +Q+ + + + +V E + Y Sbjct: 415 ANNF-GKVPTPGELTEADQKILDLAEQAFDVVGEALQHSRFKQGITHAMHVVGEANAYVA 473 Query: 430 AQKPWELKK--------------TNP-------DRASTVLYVTVEVIRQLAILLQAFVPK 468 +PW+L K TN DR +TVL+V ++V+ LL ++P Sbjct: 474 EMQPWKLAKAIKTAKAGVETDSATNAADVAALEDRLATVLWVALQVVSDANTLLTPYIPN 533 Query: 469 LANKIFDIL 477 +A ++ + L Sbjct: 534 IAQQVHETL 542 >gi|256824214|ref|YP_003148174.1| methionyl-tRNA synthetase [Kytococcus sedentarius DSM 20547] gi|256687607|gb|ACV05409.1| methionyl-tRNA synthetase [Kytococcus sedentarius DSM 20547] Length = 600 Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 154/529 (29%), Positives = 239/529 (45%), Gaps = 72/529 (13%) Query: 6 KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K+ + A Y N H+GH + +DV +R+ R+ G DVL +GTDEHG I A+ Sbjct: 3 KVLSAVAWPYANGPRHLGHVAGFGVPSDVYSRYMRMAGHDVLMVSGTDEHGTPILVQAEA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG T + FVD+N+R + L +SYD F RTT HH R ++ + G + Sbjct: 63 AGKTPREFVDENNRAICEDLTALGLSYDLFTRTTTVNHHTVVREMFTAVHRNGYFVEQTQ 122 Query: 125 SGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPV--------------QW 159 G S D D+ +G Q +P ++ Sbjct: 123 LGAISPSTGRTLPDRYIEGTCPICGDDSARGDQCDNCGNQLDPADLIDPRSKINGETPEF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 +E + L A D L + E R VI+F ++ L+++ T DWG Sbjct: 183 IETNHFLLDLPALADALGEWLA---ERDASGAWRPNVIAFSRNILEEIRPRAMTRDIDWG 239 Query: 218 IKIP----DDPQYIMYVWIDALTNYLTTT--------------GYLDNPDGSKAKFWPAD 259 IK+P +D +YVW DA+ YL+ + + ++P+ A F Sbjct: 240 IKVPLPDWEDAPKRLYVWFDAVIGYLSASIEWARRSGDPEAWRSWWNDPETLSAYF---- 295 Query: 260 LHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISK 305 +GKD + FH+ WPA LL+ N L LP V S F+ +G++ S Sbjct: 296 ---MGKDNIVFHSQIWPAELLAHNGQGSRGGEPGPFGELVLPTTVVSSEFMTLEGKQFST 352 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S G+VI +V+E DA+RY+L D + + +R+N +L G GNLV+R+ Sbjct: 353 SRGHVIYVRDVMERQQPDAVRYYLSAVAPETSDADFSWEEFARRINGELVAGWGNLVNRT 412 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 SMI K + G IP PG E D ++L + ++ +ALA+ + LVSE + Sbjct: 413 ASMIAKSF-GEIPQPGELQEVDRALLEAVRGGYATVGGLLERFRNRQALAEAMRLVSEAN 471 Query: 426 RYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 Y +P++LK N +R +TVL+ + + +L LL F+P AN++ Sbjct: 472 AYISTTEPFKLKGAENAERLATVLWTCAQAVTELNTLLSPFLPHTANEV 520 >gi|160872857|ref|ZP_02062989.1| methionyl-tRNA synthetase [Rickettsiella grylli] gi|159121656|gb|EDP46994.1| methionyl-tRNA synthetase [Rickettsiella grylli] Length = 553 Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 154/544 (28%), Positives = 254/544 (46%), Gaps = 55/544 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL +++A+ Y N HIGH E I AD+ RF ++ G +F +G D HG I AAQ Sbjct: 7 KLLVTSALPYANGPLHIGHLLEHIQADIWVRFQKIRGHHCIFISGEDAHGTPIMLAAQQR 66 Query: 66 GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 ++ + V + + + D+ D I +D+F T + R +++++ +KG+IYK Sbjct: 67 NISPEALVREIADAHQHDLTDFF-IEFDNFYTTHSPENEALTRFIYQRMKEKGNIYKKRI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160 Y + + D V KGA + + + ++P+ + Sbjct: 126 KQAYDPSAKMFLPDRYV-KGACPCCKALDQYGDNCEVCGSTYSPLDLLDPKSIITGTSPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E YFFRLS Y + L + E L E N+++ + K GL DL +SR +G Sbjct: 185 VKESEHYFFRLSDYTEFLHQWITQ--EDHLADEISNKLLEWFKEGLHDLDISRDAPYFGF 242 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKDILRFH 271 KIP YVWIDA Y+ + L + D ++W H IGKDI+ FH Sbjct: 243 KIPGTENKFFYVWIDAPIGYMASFKNLCSRHSDLHFDEYWSCPTTTELYHFIGKDIINFH 302 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 AI+WPA L SAN P +F HG++ G+K+SKS G I + + + LRY+ Sbjct: 303 AIFWPAILKSANFRSPTAIFVHGYVTVNGQKMSKSRGTFISARHYLNHLDPEYLRYYYAT 362 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ + ++ +++N+DL + N+ SR S I K + + + ++ Sbjct: 363 KLSRKTEDIDFNLHDFIQKINSDLIGKLVNIASRCASFINKKFAHQLSK----NLLNPAL 418 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP---DRASTV 447 + R EI + + +RA+ ++ L + ++ DA+KPW L K NP +RA V Sbjct: 419 METFIRQGDEISSHYEALNYNRAMKLIMELADKANQMIDAEKPWLLIK-NPNSVERAHAV 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--TFDP 505 + + + R L + L+ +P A K+ L + + +QR K G H+ TF P Sbjct: 478 CSLGLNLFRILILYLKPVLPMTAKKVERFLNIPT-----LTWNQREK-GLFDHRINTFTP 531 Query: 506 IFPR 509 + R Sbjct: 532 LLQR 535 >gi|171059439|ref|YP_001791788.1| methionyl-tRNA synthetase [Leptothrix cholodnii SP-6] gi|226710910|sp|B1XWM2|SYM_LEPCP RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|170776884|gb|ACB35023.1| methionyl-tRNA synthetase [Leptothrix cholodnii SP-6] Length = 689 Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 171/567 (30%), Positives = 260/567 (45%), Gaps = 75/567 (13%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 +L+++TA+ Y N + HIGH E I AD+ RF RL G V F D HG I AA+ A Sbjct: 4 QLFVTTALPYANGKFHIGHIMEYIQADIWVRFQRLMGHQVHFVGADDAHGAPIMIAAEKA 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T + FV + R+ D IS+D++ T +H+ + +++ + D G I Sbjct: 64 GKTPQQFVADIAAGRREYLDGFHISFDNWHSTDGPENHELAQSIYRALRDNGLIEVRSIE 123 Query: 126 GWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME------- 161 ++ + D E K GA QY ++ NP + Sbjct: 124 QFFDPEKGMFLPDRFIKGECPKCGAKDQYGDSCEVCGAVYTPTEVRNPYSALSGATPVLK 183 Query: 162 -EEGYFFRLSAYQDKLLSYYE--SHPEFILPIERRNEVISFV------KSGLKDLSLSRK 212 + YFF+LS + +Y E +H L E N+V + K GL D +SR Sbjct: 184 SSDHYFFKLS--DPRCAAYLEQWTHEGGKLQQEVINKVKEWFTKDDEGKGGLGDWDISRD 241 Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA-------------D 259 +GI+IPD P YVW+DA YL + + G +AK+ A Sbjct: 242 APYFGIEIPDAPGKYFYVWLDAPIGYLASLKNYFDKGGPRAKYGEARSFDEFIADPAVEQ 301 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIE 318 H IGKDI FH ++WPA L + P VF HGF+ ++ GEK+SKS G +DP++ + Sbjct: 302 YHFIGKDITYFHTLFWPATLHFSGRKTPNNVFVHGFMTVNNGEKMSKSRGTGLDPLKYL- 360 Query: 319 EVGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 +G++A LRY++ ++ A +D ++ D RVNADL N+ SR+ + K + G Sbjct: 361 SLGMNAEWLRYYIAAKLNAHVEDVDFNPDDFVSRVNADLVGKYINIASRAAGFLAKRFGG 420 Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 + + S+L + + + +AL +V+ L V+ Y DA KPWE Sbjct: 421 RLSSD--LGVDGMSLLETLRAHRDTLTGLYEAREFGKALREVMGLADRVNEYVDANKPWE 478 Query: 436 LKKTNPDRASTVLY----VTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADENRC- 485 L K + A VL+ V +E R L I L+ +P LA ++ L V A +R Sbjct: 479 LAKK--EGADAVLHDVCSVCIEAFRLLTIYLKPVLPALAAQVESFLQVEPLTFAQAHRAL 536 Query: 486 -------FQSLDQRLKPGFMLHKTFDP 505 +Q L QR+ P +L F+P Sbjct: 537 GAHTIGSYQHLMQRVDPK-LLDALFEP 562 >gi|68566009|sp|Q8FR00|SYM_COREF RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|23492805|dbj|BAC17777.1| putative methionyl-tRNA synthetase [Corynebacterium efficiens YS-314] Length = 613 Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 159/534 (29%), Positives = 248/534 (46%), Gaps = 65/534 (12%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 ++ + + +S A Y N HIGH + +DV ARF R+ G +VL +GTDEHG + Sbjct: 2 VRMTKNVLVSVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGNNVLMVSGTDEHGTPLL 61 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A GV+ + D+ +R + L +SYD F RTT H+ + L++ + D G + Sbjct: 62 VQADKEGVSVQELADKYNRQIVEDLTGLGLSYDLFTRTTTSNHYAVVQELFRGLHDNGYM 121 Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPV----- 157 K G S D + GA G Q N + NPV Sbjct: 122 IKETTLGAISPSTGRTLPDRYIEGTCPICHADGARGDQCDNCGNQLDPADLINPVSKING 181 Query: 158 ---QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213 +++E E + L A D L ++ + ++ R V+ F + L+D+ T Sbjct: 182 ETPEFVETEHFLLDLPALADSLTAWLKGREDW------RPNVLKFSLNLLEDIRPRAMTR 235 Query: 214 -FDWGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PAD 259 DWGI IP D+ +YVW DA+ YL+ + +P+ + FW + Sbjct: 236 DIDWGIPIPVEGWQDNNAKKLYVWFDAVVGYLSASIEWAWRTGDPEAWRT-FWNDPETSS 294 Query: 260 LHVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISK 305 + +GKD + FH+ WPA LL L LP +V S F+ G K S Sbjct: 295 YYFMGKDNITFHSQIWPAELLGYAGRGSRGGEVGDLGELNLPTEVVSSEFLTMSGSKFSS 354 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S G VI + + E G D LRYF+ D + D +RVN +LANG GNLV+R+ Sbjct: 355 SKGVVIYVKDFLAEFGPDPLRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRT 414 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 VSM K++ G +P P A T+SD+ IL + + +++ A+ Q++ +V E + Sbjct: 415 VSMAHKNF-GEVPVPSALTDSDQRILDLAASTFDSAGADLELSKFKNAITQIMHVVGEAN 473 Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y Q+PW+L K T +R +TVL+ ++V+ +L ++P A K+ + L Sbjct: 474 AYIAEQEPWKLAKDETQRERLATVLWTALQVVSDCNTMLTPYLPHTAQKVHETL 527 >gi|161485986|ref|NP_737577.2| methionyl-tRNA synthetase [Corynebacterium efficiens YS-314] gi|259507069|ref|ZP_05749969.1| methionine--tRNA ligase [Corynebacterium efficiens YS-314] gi|259165347|gb|EEW49901.1| methionine--tRNA ligase [Corynebacterium efficiens YS-314] Length = 610 Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 159/530 (30%), Positives = 246/530 (46%), Gaps = 65/530 (12%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + + +S A Y N HIGH + +DV ARF R+ G +VL +GTDEHG + A Sbjct: 3 KNVLVSVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGNNVLMVSGTDEHGTPLLVQAD 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ + D+ +R + L +SYD F RTT H+ + L++ + D G + K Sbjct: 63 KEGVSVQELADKYNRQIVEDLTGLGLSYDLFTRTTTSNHYAVVQELFRGLHDNGYMIKET 122 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPV--------Q 158 G S D + GA G Q N + NPV + Sbjct: 123 TLGAISPSTGRTLPDRYIEGTCPICHADGARGDQCDNCGNQLDPADLINPVSKINGETPE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216 ++E E + L A D L ++ + ++ R V+ F + L+D+ T DW Sbjct: 183 FVETEHFLLDLPALADSLTAWLKGREDW------RPNVLKFSLNLLEDIRPRAMTRDIDW 236 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVI 263 GI IP D+ +YVW DA+ YL+ + +P+ + FW + + + Sbjct: 237 GIPIPVEGWQDNNAKKLYVWFDAVVGYLSASIEWAWRTGDPEAWRT-FWNDPETSSYYFM 295 Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WPA LL L LP +V S F+ G K S S G Sbjct: 296 GKDNITFHSQIWPAELLGYAGRGSRGGEVGDLGELNLPTEVVSSEFLTMSGSKFSSSKGV 355 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI + + E G D LRYF+ D + D +RVN +LANG GNLV+R+VSM Sbjct: 356 VIYVKDFLAEFGPDPLRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMA 415 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 K++ G +P P A T+SD+ IL + + +++ A+ Q++ +V E + Y Sbjct: 416 HKNF-GEVPVPSALTDSDQRILDLAASTFDSAGADLELSKFKNAITQIMHVVGEANAYIA 474 Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Q+PW+L K T +R +TVL+ ++V+ +L ++P A K+ + L Sbjct: 475 EQEPWKLAKDETQRERLATVLWTALQVVSDCNTMLTPYLPHTAQKVHETL 524 >gi|77360260|ref|YP_339835.1| methionyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125] gi|123589440|sp|Q3IL10|SYM_PSEHT RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|76875171|emb|CAI86392.1| methionyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125] Length = 673 Score = 199 bits (506), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 137/505 (27%), Positives = 235/505 (46%), Gaps = 43/505 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ I++A+ Y N H+GH E I D+ +RF +L G + + D HG I AQ Sbjct: 3 QRKILITSALPYANGPTHLGHLLEYIQTDIWSRFQKLQGHEAYYVCADDAHGTPIMLNAQ 62 Query: 64 NAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+T + V++ S RD AD +I +D++ T + + + +++ +++D G I + Sbjct: 63 KQGITPEEAVEKVSIERQRDFAD-FNIKFDNYHSTHSQENKELSELIYNRLNDAGHIKRH 121 Query: 123 CYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM----------- 160 S + + D E G + A ++P + Sbjct: 122 TISQLFDPEKGIFLPDRFVTGTCPTCKSENQNGDNCDSCGATYSPTDLINPRSVMSGAEP 181 Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + E YFF L A++ L + S + E N++ + GL+ +SR +G Sbjct: 182 ILKDSEHYFFDLPAFEGMLKEWLHSG---TIQQEMANKLDEWFTDGLQQWDISRDAPYFG 238 Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFH 271 +IP+ P YVW+DA Y+ + L + G FW AD H IGKDI+ FH Sbjct: 239 FEIPNAPGKYFYVWLDAPIGYMASFKNLCDKKGIDFDAFWAADSDAELYHFIGKDIIYFH 298 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L AN P VF+HGF+ GEK+SKS G I ++ + + LRY+ Sbjct: 299 SLFWPAMLEGANFRKPTNVFAHGFVTVNGEKMSKSKGTFIKARTYLDNLNPEYLRYYYAA 358 Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ G D + + +RVN+DL + N+ SR I K +DG + + T + Sbjct: 359 KLSGGIVDLDLNLEDFAQRVNSDLVGKVVNIASRCAGFITKKFDGKL----SATVMQPQL 414 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVL 448 L I + +N+ RA+ ++++L + +++ DA PW L K T A V Sbjct: 415 LKEFQAAAPSITAHYENREFSRAIREIMALADKANQFIDAAAPWVLIKDETKQQEAHEVC 474 Query: 449 YVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P++A+ + Sbjct: 475 SLGLNLFRVLITYLKPVLPEMADNV 499 >gi|73668089|ref|YP_304104.1| methionyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro] gi|121729563|sp|Q46F18|SYM_METBF RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|72395251|gb|AAZ69524.1| methionyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro] Length = 710 Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 134/490 (27%), Positives = 228/490 (46%), Gaps = 39/490 (7%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N + HIGH + AD+ AR R +G DV F G+D HG I A+ G+T Sbjct: 11 VTCGLPYANGKAHIGHLRTYVPADIYARSLRKEGRDVTFVCGSDTHGTPIVVNAEELGIT 70 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 K V+ ++F + L + +D F T + +H+ + ++ +KG +Y Y Sbjct: 71 PKELVEVYHKHFDETFKQLGVYFDAFGTTDDPENHNRTLDIVNRLIEKGYVYPKTIEIAY 130 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQH---------------NPVQWMEEE 163 + + D E+ +G + +H P ++ ++E Sbjct: 131 CPKCNRFLPDRYVEGSCPHCGEIARGDECDQGCGKHLEPGELLNPVCTICGGPAEYRQQE 190 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 +FF+LS + D L+ Y + + I RN + +VK GL D ++R +WG+K P Sbjct: 191 HFFFKLSEFSDYLMDYLSN--DLGGTINARNYALGWVKQGLTDWCITR-NLEWGVKFPGH 247 Query: 224 PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFL 279 ++YVW+DA Y+ T + S KFW D +H IG DI H I+WPA L Sbjct: 248 DDLVVYVWVDAPIGYIAFTEEWAAKAGDSWEKFWKNDGEIVHFIGGDITYHHCIFWPAML 307 Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIACGK 337 A+ +P V + G + + +K SKS GNV+ E G D LRY+L + K Sbjct: 308 KGADYSVPTAVVASGMVKIEDKKFSKSRGNVVWVGEDYLSHGFHPDLLRYYLASYTSHTK 367 Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397 + + L++++N +L + +GN + R++ K+Y G +P+ E E I + Sbjct: 368 ELNFSWRVLQEKINTELVSVLGNFLYRTMLFAFKNY-GEVPSGELEPEVREEI----EKA 422 Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 L+E++ M +A+ +SL S + YF + +PW L K + VLY + + + Sbjct: 423 LKEVKAAMAEYEFKKAVDSAMSLASFGNTYFQSHEPWNLIKQDKAACGQVLYNCLHLAKA 482 Query: 458 LAILLQAFVP 467 L ++ + P Sbjct: 483 LCLIFEPVTP 492 >gi|152965010|ref|YP_001360794.1| methionyl-tRNA synthetase [Kineococcus radiotolerans SRS30216] gi|187647730|sp|A6W6U1|SYM_KINRD RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|151359527|gb|ABS02530.1| methionyl-tRNA synthetase [Kineococcus radiotolerans SRS30216] Length = 600 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 149/523 (28%), Positives = 242/523 (46%), Gaps = 62/523 (11%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ +A+A+P N HIGH + +DV +R+ R+ G DVL +GTDEHG I A+ Sbjct: 3 HVLSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVQAEQ 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + D+ +R + L +SYD F RTT H+ + +++ + G + Sbjct: 63 EGLTPQQLADRYNRVIAEDLHGLGLSYDLFTRTTTANHYAVVQEMFRTVHRNGYMVARKG 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN------------------PVQ 158 G S D V Y GA G + N PV Sbjct: 123 MGAISPSTGRTLPDRYVEGTCPICGYDGARGDQCDNCGNQLDAIELKNPRSRINGETPV- 181 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216 ++E E ++ L A + L S+ ++ + R V+ F ++ L D+ T DW Sbjct: 182 FVETEHFYLDLPALAEALGSWLQTRADTG---RWRPNVLKFSQNLLADMKPRAMTRDIDW 238 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW--PA--DLHVIG 264 GI +P D+P +YVW DA+ YL+ + D + +W PA + +G Sbjct: 239 GIPVPLEGWEDNPAKRLYVWFDAVIGYLSASVEWARRSGDDDAWKAWWTDPAAESYYFMG 298 Query: 265 KDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNV 310 KD + FH+ WPA LL+ NL LP +V + F+ +G++ S S G V Sbjct: 299 KDNITFHSQIWPAELLAYDGRGSAGGQPGPFGNLNLPTEVVASEFLTMEGKQFSSSRGVV 358 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 I +V+ DALRYF+ D + R N++L G GNLV+R+ S+I Sbjct: 359 IYVRDVLARYQPDALRYFISAAGPENNDSDFTWQEFATRTNSELVAGWGNLVNRTASLIA 418 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 K+ G IP G T++D +L+ S + ++ + + + +V EV++Y Sbjct: 419 KNV-GEIPAAGELTDADRDLLATTSGGFSTVGGFIEAHRQRAGIGEAMRVVGEVNKYLTE 477 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 Q+PW++K ++P+R +VL+VT + + LL F+P A K+ Sbjct: 478 QEPWKIKNSDPERMKSVLHVTAQAVSDCRTLLSPFLPHSAQKV 520 >gi|315605052|ref|ZP_07880105.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313239|gb|EFU61303.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] Length = 613 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 162/525 (30%), Positives = 243/525 (46%), Gaps = 61/525 (11%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 I +A+A+P N HIGH + +DV +R+ R+ G DVL +GTDEHG I AA +A Sbjct: 4 ILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADSA 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY- 124 GV+ + DQN+R + L +SYD F RTT H+ + ++ + D G + + Sbjct: 64 GVSARELADQNNRLIVEDLVALGLSYDLFTRTTAGNHYRVVQDMFATVRDNGYMIEQVTR 123 Query: 125 -----SGWYSLRDEAYYNDDEVYKGADG----QYYNA--QHNPV--------------QW 159 S +L D Y GA+G Q N Q +P Q+ Sbjct: 124 AAISPSTGRTLPDR-YIEGTCPICGAEGARGDQCDNCGNQMDPTELINPHSRINGETPQF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 +E YF L A L + + + R VI F K+ L D+ T DWG Sbjct: 183 VESTHYFLDLPALAQALSDWLDEREKSGT---WRPNVIKFSKNFLGDIRPRAMTRDIDWG 239 Query: 218 IKIP---DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW--PADL--HVIGKDI 267 I +P D P +YVW DA+ YL+ + G ++W P L + +GKD Sbjct: 240 IPVPGWEDQPTKRLYVWFDAVIGYLSASIEWARRSGDPEAWRRWWNDPEALSYYFMGKDN 299 Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 + FH+ WPA LL N L LP +V S F+ +G+K S S G VI Sbjct: 300 IVFHSQIWPAELLGYNGQGAKGGKPGDLGVLNLPTEVVSSEFLTMEGKKFSSSHGIVIYV 359 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 + +E DALRYF+ D + +R N +L G GNLV+R+ SMI K + Sbjct: 360 RDFLERYQADALRYFISAAGPETSDSDFTWAEFVRRTNGELVAGWGNLVNRTASMIAKKF 419 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 G IPTPG E D ++L + +++ AL++ + LV E ++Y +P Sbjct: 420 -GQIPTPGELEEIDRALLDAVEAGFATVGNLIRHHRQKAALSEAMRLVGEANKYVTDTEP 478 Query: 434 WELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++LK +R +TVL+ +V+ L ++L F+P AN + ++ Sbjct: 479 FKLKAPEQRERLATVLWTLAQVVADLNLMLSPFLPHAANDVDRVM 523 >gi|52550379|gb|AAU84228.1| methionyl-tRNA synthetase [uncultured archaeon GZfos3D4] Length = 541 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 137/504 (27%), Positives = 240/504 (47%), Gaps = 44/504 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 +++A+ Y N + HIGH + AD+ R R G DV+F +G+D HG I +A+ G+T Sbjct: 11 VTSALPYVNGECHIGHLRTYVPADIYVRMLRKMGYDVIFISGSDTHGTPIVLSAEAQGIT 70 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG------ 122 + V + +F+ M L++++D + RT + +H + KK+ + G ++K Sbjct: 71 PEEVVKKYHEHFKRMFQALNVNFDYYGRTDSESNHRRTTEIVKKLIENGYVHKKETKQAF 130 Query: 123 CYSGWYSLRDE----------AYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEE 163 C + L D A DE +G + + + ++E Sbjct: 131 CNTCGRFLPDRYVEGKCPYCGAVARGDECDQGCGKHLEPGEIIEPRCKLCGSKADFKQQE 190 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 +FF LS++ D L++Y ++ + RN +VK L+D ++R +WG+K P Sbjct: 191 HFFFNLSSFADFLIAYLDN---IGGTLNARNYAKEWVKKELRDWCVTR-NLEWGVKFPGR 246 Query: 224 PQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHAIYWP 276 + ++YVW+DA Y++ T L N + K+W + +H IG DI+ H I+WP Sbjct: 247 DELVVYVWVDAPIGYISFTEELLNYTTDENDWRKYWKGNEATIVHFIGTDIIYHHCIFWP 306 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 A L A LP V + G + G SKS GNVI E +E D LRY+LV + + Sbjct: 307 AMLKGAGYSLPDAVVASGMVKINGGTFSKSRGNVIWVKEFLERFHPDTLRYYLVAQSSHT 366 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396 K+ + D RVN +L +GNLV R VS K++ ++P + DE + + +R Sbjct: 367 KELNFSWDSFSMRVNNELVAILGNLVHRVVSFAYKNFR-VVPE----GDVDEDVFAAIAR 421 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRASTVLYVTVE 453 QE+ ++ + + + L + +F ++PW L K +R ++ ++ Sbjct: 422 TKQEMISAVEEYEFKKLVDSAMKLADFGNSFFQREEPWHLIKKGDAGRERCGEIVRNVLQ 481 Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477 +I+ + I L+A +P +++ L Sbjct: 482 LIKAVCIGLEAVMPAKMAEVWSQL 505 >gi|300312383|ref|YP_003776475.1| methionyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gi|300075168|gb|ADJ64567.1| methionyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1] Length = 690 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 158/520 (30%), Positives = 242/520 (46%), Gaps = 57/520 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 +L+++TA+ Y N HIGH E I AD+ RF R+ G +V F D HG I AA+ A Sbjct: 8 QLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGNEVHFVGADDAHGAPIMIAAEKA 67 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD-IYKGCY 124 G+T + FV + + D I++D++ T +H+ + +++ + D+ I Sbjct: 68 GITPQQFVANIAAGRKQYLDGFHIAFDNWSSTDSPENHELSQEIYRALRDEAKLISTKTI 127 Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHN---------------------PVQ 158 +Y + D + G QY ++ N PV Sbjct: 128 DQFYDPVKNMFLPDRYIKGECPKCGTKDQYGDSCENCSAVYSPTDLKNPYSTLSGATPVM 187 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER-RNEVISFVK------SGLKDLSLSR 211 E +FF+LS K +++ E+ L R + EV + K GL D +SR Sbjct: 188 -KSSEHFFFKLS--DPKCVAFLR---EWALDSNRLQPEVANKAKEWLDGEGGLGDWDISR 241 Query: 212 KTFDWGIKIPDDPQYIMYVWIDA-------LTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264 +GI+IPD P YVW+DA L NY TG + D A H IG Sbjct: 242 DAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNYFAKTGR--DFDAFMADDKTEQYHFIG 299 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324 KDI FH ++WPA L A P VF+HGFI GEK+SKS G I P+ + ++G++ Sbjct: 300 KDITYFHTLFWPAMLKFAGRKTPNNVFAHGFITVSGEKMSKSRGTGISPLRYL-DIGMNP 358 Query: 325 --LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 LRY++ ++ A +D ++ D RVNADL N+ SR+ I K ++G + T Sbjct: 359 EWLRYYIAAKLNAKVEDVDFNPDDFVARVNADLIGKYVNIASRAAGFIAKRFEGRVST-- 416 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 + +D++ L+ V EIR + + +AL V+ ++ Y DA KPWEL K + Sbjct: 417 QWATADDAFLAKLRGVADEIRSLYEQREYGKALRLVMEQADAINAYVDANKPWELAKDSA 476 Query: 442 DRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 A V +E R L + L+ +P+LA ++ L V Sbjct: 477 RDAQLHEVCSRLLEAFRILTVYLKPVLPQLAAQVEAFLQV 516 >gi|255325447|ref|ZP_05366551.1| methionine--tRNA ligase [Corynebacterium tuberculostearicum SK141] gi|255297533|gb|EET76846.1| methionine--tRNA ligase [Corynebacterium tuberculostearicum SK141] Length = 627 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 157/530 (29%), Positives = 247/530 (46%), Gaps = 65/530 (12%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E + ++ A Y N HIGH + +DV ARF R+ G +VL +GTDEHG + A Sbjct: 20 ESVVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGRNVLMVSGTDEHGTPLLVQAD 79 Query: 64 NAGVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GV+ + D+ +R D+A+ L +SYD F RTT + H+ + L+K + G + K Sbjct: 80 KEGVSVRELADRYNRQIVTDLAN-LGLSYDLFTRTTTRNHYSVVQELFKGLYANGYMLKE 138 Query: 123 CYSGWYSLRD-----EAYYNDDEVYKGADGQYYNA------QHNPV-------------- 157 G S + Y GADG + Q +PV Sbjct: 139 TTQGAISPSTGRTLPDRYIEGTCPICGADGARGDQCDECGNQLDPVDLINPVSKINGETP 198 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215 +++E E + L + +D+L + + ++ R V+ F + L+D+ T D Sbjct: 199 KFIETEHFLLDLPSIKDELQKWLSTREDW------RPNVLKFSLNLLEDMRPRTMTRDID 252 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW--PADLHVI-- 263 WGI IP D+ +YVW DA+ YL+++ Y + FW P H Sbjct: 253 WGIPIPVEGWQDNNAKKLYVWFDAVIGYLSSSIEWAYRTGQPEAWKDFWQNPEARHYYFQ 312 Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WPA LL L LP ++ S ++ G K S S G Sbjct: 313 GKDNITFHSQIWPAELLGYAGKGNKGGELHQYGELNLPTEIVSSEYLTMSGSKFSSSKGV 372 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI + + E G DALRYF+ D + D +R+N +LANG GNLV+R+VSM Sbjct: 373 VIYVKDFLAEFGPDALRYFIAVAGPENNDTDFTWDEFVRRINNELANGWGNLVNRTVSMA 432 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 K++ G +P P A E D+ IL + + ++ +A+ ++ +V E + Y Sbjct: 433 FKNF-GEVPAPAALEEKDKEILQLAEETFETAGSLLEQSKFKQAITAIMHVVGEANAYIA 491 Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Q+PW+L K T +R +TVL+ ++V+ ++L ++P A K+ + L Sbjct: 492 DQEPWKLAKDETQRERLATVLWTALQVVSDCNVMLTPYLPFTAQKVHETL 541 >gi|324998150|ref|ZP_08119262.1| methionyl-tRNA synthetase [Pseudonocardia sp. P1] Length = 596 Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 155/527 (29%), Positives = 242/527 (45%), Gaps = 68/527 (12%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + TA+A+P N HIGH + +DV AR+ R+ G VL +GTDEHG I A Sbjct: 5 VLTAVAWPYANGPRHIGHVSGFGVPSDVFARYRRMAGDRVLMVSGTDEHGTPIQVQADAE 64 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + D+ N RD+ L +SYD F RTT H++ + ++ + G I Sbjct: 65 GLTPRQLADKYNDVITRDLQG-LGLSYDLFTRTTTSNHYEVVQHMFTALYKNGYIVPRTQ 123 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159 S D + Y GA G + N + + Sbjct: 124 LAAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPADLKNPRSKINGETPSF 183 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF---VKSGLKDLSLSRKTFDW 216 +E E +F L A+ + L S+ + ++ R V+ F + LK +++R +W Sbjct: 184 VETEHFFLDLPAFSEALGSWLSTRTDW------RPNVLKFSANLAENLKPRAITRD-LEW 236 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT--GYLDNPDGSKAKFWPAD-----LHVIG 264 G+ +P D+P +YVW DA+ YL+ + PD K W D + +G Sbjct: 237 GVPVPLDGWSDNPMKKIYVWFDAVIGYLSASVEWARRGPDPDAWKQWWTDPEAQAFYFMG 296 Query: 265 KDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNV 310 KD + FH++ WPA LL N L LP +V S ++ G K S S G V Sbjct: 297 KDNITFHSVMWPAILLGHNGQGDRGGDPGRYGKLDLPSEVVSSEYLTMLGSKFSTSRGTV 356 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 I + + E G DALRY + +D + D +RVN +LAN GNLV+RSVSM Sbjct: 357 IYVGDFLREFGPDALRYHIAVAGPENQDVDFTWDEFVRRVNFELANEWGNLVNRSVSMAH 416 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 K+ G IP P A ++D +L+V + + +A + + +V+ +RY Sbjct: 417 KNV-GAIPAPTAPQQADAELLAVSRAGFDTVGGLLARNRFKQAAGEAMRVVTAANRYLSD 475 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Q+PW+ +K +P+R T+L+ ++V++ LL F+P A K+ + L Sbjct: 476 QEPWK-RKDDPERRDTILHTALQVVQDANTLLTPFLPHSAQKVHEAL 521 >gi|114319978|ref|YP_741661.1| methionyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1] gi|122312171|sp|Q0AAG6|SYM_ALHEH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|114226372|gb|ABI56171.1| methionyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1] Length = 675 Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 141/500 (28%), Positives = 232/500 (46%), Gaps = 43/500 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ ARF RL G D + D HG I A+ Sbjct: 4 KILVTSALPYANGPIHLGHLVEYIQTDIWARFQRLRGHDCHYVCADDAHGTPIMLKARER 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + RD AD L I +D++ T + +++ +++ G I + Sbjct: 64 GITPEALIAEVGEEHQRDFADFL-IEFDNYHTTHSDENRYFAELIYSRLNQAGHIDRKVI 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQW-------------- 159 Y + E + D + GA+ QY A + P + Sbjct: 123 KQAYDPKLEMFLPDRYIKGECPRCGAEDQYGDSCEACGATYTPAELKNAVSVVSGERPVE 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E YFFRL ++ L + + PE L E N++ + K GL+ +SR +G + Sbjct: 183 RESEHYFFRLQDFEAMLREW--ASPEH-LQAEVANKLAEWFKEGLRSWDISRDAPYFGFR 239 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-----PADL-HVIGKDILRFHAI 273 IPD YVW+DA Y+ + +L G W A+L H IGKDI+ FHA+ Sbjct: 240 IPDTEDKYFYVWLDAPIGYMASFKHLCERKGLDFDDWWGPDSTAELYHFIGKDIIYFHAL 299 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L A P ++ +HGF+ G+K+SKS G I ++ + + LRY+ ++ Sbjct: 300 FWPAMLHGAGFRKPTEICAHGFLTVNGQKMSKSRGTFIMARTWLDHLNPEYLRYYFAAKL 359 Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 + D D +RVNADL + N+ SR I K ++G + T D ++ Sbjct: 360 SASVHDLDLSLDDFTQRVNADLVGKLVNIASRCAGFIHKRFEGRL----GETLDDPALYR 415 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYV 450 + + I E + + RA+ ++++L + ++Y D QKPW L K DR + Sbjct: 416 QFTAAGEHIAELYEKREFSRAMREIMALADQANQYVDEQKPWVLAKQEDQADRVQDICTQ 475 Query: 451 TVEVIRQLAILLQAFVPKLA 470 + + R L + L+ +P+LA Sbjct: 476 GLNLFRVLVVYLKPVLPRLA 495 >gi|326333771|ref|ZP_08200004.1| methionine--tRNA ligase [Nocardioidaceae bacterium Broad-1] gi|325948353|gb|EGD40460.1| methionine--tRNA ligase [Nocardioidaceae bacterium Broad-1] Length = 601 Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 157/524 (29%), Positives = 248/524 (47%), Gaps = 64/524 (12%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + +A+A+P N HIGH + +DV +R+ R+ G DVL +G+DEHG I AA A Sbjct: 4 VLSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGSDEHGTPILIAADEA 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + VD+N R + L ++YD + RTT HH + L+ + + G + Sbjct: 64 GMTPQELVDKNHRIIVEDLTSLGLTYDLYTRTTSANHHSVVQELFLGVYNNGYFVEQTSK 123 Query: 126 GWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPV--------QWM 160 G S D + Y GA G Q N + NPV +++ Sbjct: 124 GAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPDQLINPVSKINGETPEFI 183 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218 E + +F L A D L ++ + + L R VI F ++ LK++ T DWGI Sbjct: 184 ETQHFFLDLPALADALHAFLDDREQTGL---WRPNVIRFSQNILKEIRPRAMTRDIDWGI 240 Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HVIGK 265 K+P D+P MYVW DA+ YL+ + NP+ + +W P L + +GK Sbjct: 241 KVPLDGWRDNPTKRMYVWFDAVIGYLSASIEWARRSGNPEAWR-DWWNDPEALSYYFMGK 299 Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FH+ WPA LL+ N L LP +V S ++ +G+K S S VI Sbjct: 300 DNIVFHSQIWPAELLAYNGQGSKGGQPGAYDTLNLPTEVVSSEYLTMEGKKFSSSKKIVI 359 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 +++ DA RYF+ D + +R N +L G GNLV+R+ ++I K Sbjct: 360 YVRDLLSRYQPDAFRYFVAAAGPESNDSDFTWAEFVRRTNDELVAGWGNLVNRTATLIAK 419 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 ++ G +P G TE+D++IL + + + +A+ + + V EV++Y Sbjct: 420 NF-GELPPAGTLTEADKAILDTVGGAFATVGDLIGRHRQKQAIGEAMRAVGEVNKYVTDL 478 Query: 432 KPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473 +PW+L K DR TVL+V + + L ++L F+P AN+I Sbjct: 479 EPWKLAKDPSDRERLGTVLHVMAQCVADLNLILSPFLPFSANEI 522 >gi|300790060|ref|YP_003770351.1| methionyl-tRNA synthetase [Amycolatopsis mediterranei U32] gi|299799574|gb|ADJ49949.1| methionyl-tRNA synthetase [Amycolatopsis mediterranei U32] Length = 594 Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 153/523 (29%), Positives = 234/523 (44%), Gaps = 64/523 (12%) Query: 11 TAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 TA+A+P N HIGH + +DV +R+ R+ G VL +GTDEHG I A N Sbjct: 3 TAVAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNRVLMVSGTDEHGTPITVQADNENS 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + D+ +R + L +SYD F RTT H + + ++ + G + G Sbjct: 63 TPQETADKYTRQIGNDLQGLGLSYDLFTRTTTGNHAEVTQQIFLALHRNGYVVPKTTRGA 122 Query: 128 YSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QWMEE 162 S D V + GA G + N + +++E Sbjct: 123 ISPSTGRTLPDRYVEGTCPICGFDGARGDQCDNCGNQLDAAELINPKSRINGETPKFVET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKI 220 E YF L A+ L + + ++ R V++F K+ + D+ T DWG+KI Sbjct: 183 EHYFLDLPAFTKTLGDWLSTKTDW------RPNVLNFTKNLIDDMRPRPITRDLDWGVKI 236 Query: 221 P-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL---HVIGKDIL 268 P D P YVW DA+ Y + + NPD + + AD + +GKD + Sbjct: 237 PLEGWRDQPLKRFYVWFDAVIGYFSASVEWARRSGNPDAWQEWWNNADARSYYFMGKDNI 296 Query: 269 RFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 FHA WPA L N L LP ++ S F+ G K S S G VI Sbjct: 297 TFHAQIWPALLFGHNGEGDKGGEPGKYGKLHLPDEIVSSEFLTMSGSKFSTSRGRVIYVE 356 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374 + + + G D LRYF+ +D + D +R N +LAN GNLV+RS+SM K+ Sbjct: 357 DFLRDFGPDTLRYFISVAGPETQDTDFTWDEFVRRTNFELANEWGNLVNRSISMAHKNV- 415 Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 G IP P A T +DE + ++ + ++ A A+ + +V+ ++Y Q+PW Sbjct: 416 GAIPRPEAPTAADEDLKALSRKAFDTAGAHLARSRFKLAAAEAMKVVTAANKYLSDQEPW 475 Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +LK +P R TVL+ ++V+ LL F+P A K+ + L Sbjct: 476 KLKD-DPTRRDTVLHTALQVVSDANTLLTPFLPHSAQKVHEAL 517 >gi|38233469|ref|NP_939236.1| methionyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129] gi|68565986|sp|Q6NIA5|SYM_CORDI RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|38199729|emb|CAE49389.1| methionyl-tRNA synthetase [Corynebacterium diphtheriae] Length = 610 Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 161/529 (30%), Positives = 251/529 (47%), Gaps = 65/529 (12%) Query: 6 KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ +S A Y N HIGH + +DV AR+ R+ G +VL +GTDEHG + A Sbjct: 4 RVLVSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMSGAEVLMVSGTDEHGTPLLVQADK 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ K D+ +R + L +SYD F RTT + H+ + L+K + + G + K Sbjct: 64 EGVSVKELADRYNRQIVEDLAGLGLSYDLFTRTTTRNHYAVVQDLFKGLYENGYMIKETT 123 Query: 125 SGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------QW 159 G S + Y GA G Q N + NPV ++ Sbjct: 124 MGAVSPSTGRTLPDRYIEGTCPICGASGARGDQCDNCGNQLDPADLINPVSKINGETPKF 183 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDW 216 +E E + L A D L ++ + ++ R V+ F + L+DL ++SR DW Sbjct: 184 IETEHFLLDLPALADALAAWLKDRKDW------RPNVLKFSLNLLEDLRPRAMSRD-IDW 236 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW----PADLHVIG 264 GI IP D+ +YVW DA+ YL+ + Y + K+W + + +G Sbjct: 237 GIPIPVEGWQDNGAKKLYVWFDAVVGYLSASIEWAYRTGDPEAWKKWWNDPESSGYYFMG 296 Query: 265 KDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNV 310 KD + FH+ WPA LL L LP +V S F+ G K S S G V Sbjct: 297 KDNITFHSQIWPAELLGYQGKGAKAGSVHSLGELNLPTEVVSSEFLTMSGSKFSSSKGIV 356 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 I + ++E G D LRYF+ D + D +RVN +LANG GNLV+R+VSM Sbjct: 357 IYVKDFLKEFGADPLRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMAY 416 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 K++ G +PTPG TESD+ IL+ + E + + + + + +V E + Y Sbjct: 417 KNF-GEVPTPGELTESDKKILAQAEEAFGVVGEALAHSRFKQGITHAMHIVGEANAYIAE 475 Query: 431 QKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Q+PW+L K + +R +TVL+ ++V+ +LL ++P +A ++ + L Sbjct: 476 QEPWKLAKDESQRERLATVLWTALQVVSDCNVLLTPYLPHIAQQVHETL 524 >gi|156742957|ref|YP_001433086.1| methionyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941] gi|187647762|sp|A7NND5|SYM_ROSCS RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|156234285|gb|ABU59068.1| methionyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941] Length = 592 Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 144/523 (27%), Positives = 252/523 (48%), Gaps = 59/523 (11%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + + ++ A Y N H+GH A + ADV AR+HRL G L +G+D HG I AA+ Sbjct: 3 DTILVAVAWPYANGPFHVGHIAGAYLPADVFARYHRLRGHRTLMVSGSDCHGTPITIAAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + + + F L IS+D F +T H+ ++ ++ + G +YK Sbjct: 63 REGITPQDVIRRYHPTFLKTFQALGISFDLFTQTYTDNHYRVTTDMFLRLLENGYLYKET 122 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH----------------NPVQ 158 G YS + D V Y A G Q + H PV Sbjct: 123 MVGSYSETLGRFLPDRFVEGTCPNCGYPRARGDQCDSCGHLHDPQDLIAPRSVLDGAPVT 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFD 215 + E E +F L+ + +L ++ ES R N ++ ++++ GL+ +++R + Sbjct: 183 FRETEHFFLDLAKLEPQLRAWIESVDRSYW---RANTLLFTQNWLREGLRGRAITRD-LE 238 Query: 216 WGIKIP-DDPQYI---MYVWIDALTNYLTT-------TGYLDN--------PDGSKAKFW 256 WG+ +P DDP + +YVW DA+ Y + TG D PDGS Sbjct: 239 WGVPVPVDDPAFKDKRIYVWFDAVIGYYSASVEWAERTGAPDAWKDWWVCLPDGSA---- 294 Query: 257 PA-DLHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 PA + IGKD + FH I WPA L+ NL LP V ++ F+ +G+K+S S + Sbjct: 295 PARSYYFIGKDNIPFHTIIWPAMLIGYGNLALPYDVPANEFLNLEGDKMSTSRNWALWAP 354 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374 E+ + DA+RY+L+ +D + +RVN++L GNL +R +S+ +++ Sbjct: 355 EIEDRYQPDAIRYYLIANGPETRDSNWSWADFVQRVNSELVATWGNLANRVLSITHRNF- 413 Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 G +P PG T++D +++ + + + + + AL++ ++L ++Y Q+PW Sbjct: 414 GAVPQPGELTDADRQLIAATQQTFESVTALLDGVKLRAALSEAMALAQTANQYLSEQEPW 473 Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +L + + +RA+TVL+V + + L +L F+P + ++ ++L Sbjct: 474 KLVRHDQERAATVLFVALRTVDTLKVLFCPFLPFSSQRLHELL 516 >gi|225023038|ref|ZP_03712230.1| hypothetical protein CORMATOL_03086 [Corynebacterium matruchotii ATCC 33806] gi|224944261|gb|EEG25470.1| hypothetical protein CORMATOL_03086 [Corynebacterium matruchotii ATCC 33806] Length = 633 Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 160/552 (28%), Positives = 253/552 (45%), Gaps = 89/552 (16%) Query: 6 KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + ++ A Y N HIGH + +DV AR+ R+ G +VL +GTDEHG + A Sbjct: 3 NVLVNVAWPYANGPRHIGHVAGFGVPSDVFARYQRMTGANVLMVSGTDEHGTPLLVQADK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ D+ +R + L +SYD F RTT + H+ + L++ + D G + K Sbjct: 63 EGVSVTELADRYNRQIVEDLAGLGLSYDLFTRTTTRNHYAIVQELFRGLYDNGYMLKETT 122 Query: 125 SGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------QW 159 G S + Y GADG Q N + NPV ++ Sbjct: 123 MGAISPSTGRTLPDRYIEGTCPICGADGARGDQCDNCGNQLDPADLINPVSKINGETPKF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDW 216 +E E + L A ++L ++ ++ ++ R V+ F + L D+ ++SR DW Sbjct: 183 VETEHFLLDLPALAEELTAWLQTRNDW------RPNVLKFSLNLLSDIRPRAMSRD-IDW 235 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PA--DLHVI 263 GI IP D+P +YVW DA+ YL+ + + NPD + FW PA + + Sbjct: 236 GIPIPVEGWEDNPGKKLYVWFDAVVGYLSASIEWAYHSGNPDAWR-DFWTDPAATSYYFM 294 Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WP LL L LP +V S F+ G K S S G Sbjct: 295 GKDNITFHSQIWPGELLGYQGKGAKGGTLHRLGELNLPTEVVSSEFLTMSGSKFSSSKGV 354 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI + ++E G D LRYF+ +D + D +R+N +LANG GNLV+R VSM Sbjct: 355 VIYVKDFLKEFGPDPLRYFIAVAGPENQDTDFTWDEFVRRINNELANGWGNLVNRVVSMA 414 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 +++ +PTPG TE+D+ IL + + + E +Q+ + + + +V E + Y Sbjct: 415 ANNFE-KVPTPGELTEADQKILDLAEQAFDVVGEALQHSRFKQGITHAMHVVGEANAYVA 473 Query: 430 AQKPWELKKTN------------------------PDRASTVLYVTVEVIRQLAILLQAF 465 +PW+L K DR +TVL+V ++V+ LL + Sbjct: 474 EMQPWKLAKAIKTAKAGAAGAGADSATDAADVAALEDRLATVLWVALQVVSDANTLLTPY 533 Query: 466 VPKLANKIFDIL 477 +P +A ++ + L Sbjct: 534 IPNIAQQVHETL 545 >gi|298345592|ref|YP_003718279.1| methionine--tRNA ligase [Mobiluncus curtisii ATCC 43063] gi|298235653|gb|ADI66785.1| methionine--tRNA ligase [Mobiluncus curtisii ATCC 43063] Length = 570 Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 150/492 (30%), Positives = 239/492 (48%), Gaps = 58/492 (11%) Query: 39 RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98 R+ G DVL +GTDEHG I AA+ AG+T + ++N+R + L +SYD F RTT Sbjct: 2 RMRGHDVLMVSGTDEHGTPILVAAEAAGLTPRELANRNNRAIVEDLCQLGLSYDLFTRTT 61 Query: 99 EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYY 150 H+DT R ++K + D G + G S D + +GA G Sbjct: 62 TGNHYDTVRAMFKVVRDNGYMKVQTTRGAISPSTGRTLPDRYIEGTCPICGAEGARGDQC 121 Query: 151 NAQHNPV-----------------QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193 +A N + +++E + YF L A L + + + R Sbjct: 122 DACGNQLDPTDLIRPRSKINGETPEFVETDHYFLDLPALARALNEWLDDREKNG---NWR 178 Query: 194 NEVISFVKSGLKDLSLSRKT--FDWGIKIP--DDPQYIMYVWIDALTNYLTTT-----GY 244 VI F K+ LKD+ T DWGI IP +D +YVW DA+ YL+ + + Sbjct: 179 PNVIKFSKNFLKDIKPRAMTRDIDWGIPIPGWEDQPKRLYVWFDAVIGYLSASIEWARRF 238 Query: 245 LDNPDGSKAKFW--PADL--HVIGKDILRFHAIYWPAFLLSAN--------------LPL 286 +P+G + ++W P L + +GKD + FH+ WPA +L N L L Sbjct: 239 GQSPEGWR-QWWNNPESLSYYFMGKDNIVFHSQIWPAEMLGYNGRGDFGGKPGDLGVLNL 297 Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 P +V S F+ +G+K + S G VI +++ VDALRYF+ +D + Sbjct: 298 PTEVVSSEFLTMEGKKFASSRGIVIYVRDMLSRYQVDALRYFISAAGPENQDSDFTWSEF 357 Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 +R N++L GNLV+R+ SMI K + G IP G FT D+++L + + + + ++ Sbjct: 358 VRRTNSELVAAWGNLVNRTASMIAKKF-GEIPPAGDFTAEDQALLDAVNAGFETVGDLIE 416 Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAF 465 + ALA+++ LV E +RY +P++LK ++ DR T+L+V +V+ L +++ F Sbjct: 417 SHHQKAALAEIMRLVGEANRYVTTTEPFKLKDESQRDRLGTILHVLAQVVTDLNLMMSPF 476 Query: 466 VPKLANKIFDIL 477 +P AN I +L Sbjct: 477 LPTSANAIDKVL 488 >gi|167523457|ref|XP_001746065.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775336|gb|EDQ88960.1| predicted protein [Monosiga brevicollis MX1] Length = 445 Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 131/403 (32%), Positives = 203/403 (50%), Gaps = 58/403 (14%) Query: 115 DKGDIYKGCYSGWYSLRDEAYYNDDEVYK--GADG---QYYNAQHNPVQWMEEEGYFFRL 169 ++G IYKG Y+GWY DEAY ++ G DG + + +PV+ +EEE Y F+L Sbjct: 3 ERGYIYKGSYAGWYCRSDEAYLTSTQIEDRIGPDGTLVKVSSESGHPVELVEEENYMFKL 62 Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYI 227 A + + E+ I P R+ E+++ + S L DLS+SR + WGI +P DP+ Sbjct: 63 GALVPDVRRWVETS-NVIWPPNRKAEILNMLDSKLPDLSISRPRRKLQWGIPVPHDPEQT 121 Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP 287 +YVW+DALTNYLT G+ A P LHVIGKDI++FH +YWPAFLL+A L LP Sbjct: 122 IYVWVDALTNYLTAQGF----PTQGAPTHPM-LHVIGKDIVKFHCVYWPAFLLAAGLELP 176 Query: 288 KKVFSHGFILHKGEK---------------------------ISKSLGNVIDPIEVIEEV 320 ++V HG G K +SKSLGNV+DP++++++ Sbjct: 177 QQVLVHGHWTMDGRKYSLRPPLVCPALQPTALPIHAIVALDPMSKSLGNVVDPVQLLDQA 236 Query: 321 -GV-DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK---DYDG 375 GV D +RY+L++E DG + L V +LA+ +GNL+SR + + ++ G Sbjct: 237 DGVPDLVRYYLLKESRLDTDGDFSYRRLNA-VTKELADTVGNLLSRISNQRVNSALEFPG 295 Query: 376 M----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 + P P E ++++ S V +E+R + ++ L + + Sbjct: 296 LSVDDAPPPSPCQE----LITLGSSVAEEVRACYDRHDFGAGIEALLPLARRCNALINEL 351 Query: 432 KPWELKKTNPDRASTVLYVTV----EVIRQLAILLQAFVPKLA 470 +PW+L + + A L + E +R A LL P L+ Sbjct: 352 EPWKLARDDSPAAQATLKSLLGGAFESLRVTAALLYPVTPALS 394 >gi|268324999|emb|CBH38587.1| putitive methionyl-tRNA synthetase, partial sequence [uncultured archaeon] Length = 539 Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 141/506 (27%), Positives = 241/506 (47%), Gaps = 46/506 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + +++A+ Y N + HIGH + AD+ R R G DV+F +G+D HG I +A+ G Sbjct: 9 VLVTSALPYVNGECHIGHLRTYVPADIYVRMLRKMGHDVIFISGSDTHGTPIVLSAEAEG 68 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG---- 122 + + V + +F+ + L++ +D + +T + +H + KK+ D G +Y Sbjct: 69 IAPEAVVARFHDHFKRIFKALNVDFDYYGQTNSECNHKRTGEIVKKLIDSGYVYMEETKQ 128 Query: 123 --CYSGWYSLRDE----------AYYNDDEVYKGADGQYYNAQ---------HNPVQWME 161 C + L D A DE +G + N + E Sbjct: 129 AFCDTCGRFLPDRYVEGECPYCGASARGDECDQGCGKHLEPGEIIAPKCKICGNEAVFKE 188 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIER--RNEVISFVKSGLKDLSLSRKTFDWGIK 219 +E +FF LS + D L SY ++ L R RN +VK L+D ++RK DWG+K Sbjct: 189 QEHFFFHLSRFADFLASYLDN-----LGGTRNARNYAREWVKKELRDWCITRK-LDWGVK 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRFHAIY 274 P ++YVW+DA Y++ T L D K + +W D +H IG DI+ H I+ Sbjct: 243 FPGREDLVVYVWVDAPIGYISFTEELMGGDERKWREYWKEDGATIVHFIGTDIIYHHCIF 302 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L A LP V + G + G SKS G+V+ + +E D LRY+LV + + Sbjct: 303 WPAMLKGAGYSLPDAVVASGMVKIDGRTFSKSRGDVVWTSDFLERFHPDTLRYYLVAQSS 362 Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 K+ + + RVN +L +GNLV R VS K++ G++P E DE++++ Sbjct: 363 HTKELNFSWNSFFLRVNNELVGILGNLVHRVVSFAYKNF-GVVPE----GEIDEAVITKI 417 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVT 451 + +E ++ + + V+ L + YF ++PW L K +R ++ Sbjct: 418 TETREEAINAVEEYEFKKLVDAVMKLADFGNGYFQREEPWHLIKKGDKERERGGEIIKNV 477 Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477 +++++ + ILL+A +P+ +++ L Sbjct: 478 LQILKAVCILLEAVMPEKMAEVWSQL 503 >gi|311740856|ref|ZP_07714683.1| methionine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304376|gb|EFQ80452.1| methionine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035] Length = 627 Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 156/530 (29%), Positives = 246/530 (46%), Gaps = 65/530 (12%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E + ++ A Y N HIGH + +DV ARF R+ G +VL +GTDEHG + A Sbjct: 20 ESVVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGRNVLMVSGTDEHGTPLLVQAD 79 Query: 64 NAGVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GV+ + D+ +R D+A+ L +SYD F RTT + H+ + L+K + G + K Sbjct: 80 KEGVSVRELADRYNRQIVTDLAN-LGLSYDLFTRTTTRNHYSVVQELFKGLYANGYMLKE 138 Query: 123 CYSGWYSLRD-----EAYYNDDEVYKGADGQYYNA------QHNPV-------------- 157 G S + Y GADG + Q +PV Sbjct: 139 TTQGAISPSTGRTLPDRYIEGTCPICGADGARGDQCDECGNQLDPVDLINPVSKINGETP 198 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215 +++E E + L + +D+L + + ++ R V+ F + L+D+ T D Sbjct: 199 KFIETEHFLLDLPSIKDELQKWLSTREDW------RPNVLKFSLNLLEDMRPRTMTRDID 252 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW--PADLHVI-- 263 WGI IP D+ +YVW DA+ YL+++ Y + FW P H Sbjct: 253 WGIPIPVEGWQDNNAKKLYVWFDAVIGYLSSSIEWAYRTGQPEAWKDFWQNPEARHYYFQ 312 Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WPA LL L LP ++ S ++ G K S S G Sbjct: 313 GKDNITFHSQIWPAELLGYAGKGNKGGELHQYGELNLPTEIVSSEYLTMSGSKFSSSKGV 372 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI + + E G DALRYF+ D + D +R+N +LANG GNLV+R+VSM Sbjct: 373 VIYVKDFLAEFGPDALRYFIAVAGPENNDTDFTWDEFVRRINNELANGWGNLVNRTVSMA 432 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 K++ G +P P A E D+ IL + + ++ +A+ ++ +V E + Y Sbjct: 433 FKNF-GEVPAPAALEEKDKEILQLAEETFETAGSLLEQSKFKQAITAIMHVVGEANAYIA 491 Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Q+PW+L K +R +TVL+ ++V+ ++L ++P A K+ + L Sbjct: 492 DQEPWKLAKDEAQRERLATVLWTALQVVSDCNVMLTPYLPFTAQKVHETL 541 >gi|88859987|ref|ZP_01134626.1| methionyl-tRNA synthetase [Pseudoalteromonas tunicata D2] gi|88817981|gb|EAR27797.1| methionyl-tRNA synthetase [Pseudoalteromonas tunicata D2] Length = 673 Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 139/505 (27%), Positives = 236/505 (46%), Gaps = 43/505 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ I++A+ Y N H+GH E I D+ ARF +L G + D HG I AQ Sbjct: 3 QRKILITSALPYANGPTHLGHLLEYIQTDIWARFQKLRGHQAYYVCADDAHGTPIMLNAQ 62 Query: 64 NAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+T + V + S RD AD +I +D++ T + +++ +++DKG I K Sbjct: 63 KQGITPEEMVARVSVERQRDFAD-FNILFDNYHSTHSPENKVLSELIYNRLNDKGHIKKR 121 Query: 123 CYSGWYSLRDEAYYND----------DEVYKGADG-QYYNAQHNPVQWME---------- 161 S + + D D V + D A ++P + + Sbjct: 122 TISQLFDPEKGIFLPDRFVTGTCPSCDAVDQNGDSCDVCGATYSPTELKDPRSVMSGATP 181 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 E +FF L A++ L ++ S + E N++ + GL+ +SR +G Sbjct: 182 VLKDSEHFFFDLPAFEGMLKTWLRSGS---IQSEMANKLEEWFADGLQQWDISRDAPYFG 238 Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFH 271 +IP+ P YVW+DA Y+ + L + G +FW D H IGKDI+ FH Sbjct: 239 FEIPNAPGKYFYVWLDAPIGYMASFKNLCDKTGLNFDEFWSKDSDAELYHFIGKDIIYFH 298 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L A+ P VF+HGF+ G K+SKS G I ++ + + LRY+ Sbjct: 299 SLFWPAMLEGADFRKPTNVFAHGFVTVNGAKMSKSKGTFIKARTYLDHLNPEYLRYYFAA 358 Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ G D + + +RVNADL + N+ SR S I K +DG + D ++ Sbjct: 359 KLNSGITDLDLNLEDFAQRVNADLVGKVVNIASRCASFITKKFDGTLSE----VILDPAL 414 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVL 448 +S + I + + + RA+ ++++L + +++ DAQ PW L K + + A V Sbjct: 415 ISEFQNASESIANHFEGRDYSRAIREIMALADKANQFIDAQAPWVLIKDESKQELAHQVC 474 Query: 449 YVTVEVIRQLAILLQAFVPKLANKI 473 + + R L + L+ +PK+A+ + Sbjct: 475 TQGLNMFRLLMVYLKPVLPKMASDV 499 >gi|309791194|ref|ZP_07685726.1| methionyl-tRNA synthetase [Oscillochloris trichoides DG6] gi|308226756|gb|EFO80452.1| methionyl-tRNA synthetase [Oscillochloris trichoides DG6] Length = 597 Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 152/527 (28%), Positives = 249/527 (47%), Gaps = 64/527 (12%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E + ++ A Y N H+GH + +D+ ARF RL G VL +GTDEHG I AA Sbjct: 10 EHILVAVAWPYANGPRHVGHVAGFGVPSDIFARFQRLRGNHVLMVSGTDEHGTPITLAAD 69 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT + D+ + D L +SYD F RTT + H+ + L++ + KG I + Sbjct: 70 KEGVTPRDIADRYNEVIGDDLRNLGLSYDTFTRTTTQNHYHVTQDLFQTLYHKGYILRQE 129 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYNA---QHNPVQWME----------- 161 G +S D V YK A G + Q +P+ +E Sbjct: 130 TLGAFSATTGRTLPDRYVEGTCPICGYKDARGDQCDQCGNQLDPIDLIEPRSKVDGSTPI 189 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFD 215 E + L A+ ++L ++ E+ + R V SF + +KDL S++R D Sbjct: 190 FKKTEHFLLDLPAFGEQLRTWIEAQEHW------RPNVRSFSLNFIKDLKPRSITRD-LD 242 Query: 216 WGIKIPDDPQYI------MYVWIDALTNYLTTT-GYLDN---PDGSKAKFW--PADLH-- 261 WG+ IP P+Y +YVW DA+ YL+ + + +N PD + ++W P H Sbjct: 243 WGVPIP-LPEYADRDDKRIYVWFDAVIGYLSASIEWAENRGTPDAWR-EWWQNPQARHYY 300 Query: 262 VIGKDILRFHAIYWPAFLLS-----------ANLPLPKKVFSHGFILHKGEKISKSLGNV 310 +GKD + FH + WP LL A L LP V S F+ +G+K S S G V Sbjct: 301 FMGKDNIVFHTVIWPGMLLGYGAGGHYGAGRAKLELPYNVVSSEFLTMEGKKFSSSRGVV 360 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 I +V+ DALRYFL +D + +R N +L GNLV+R+++ + Sbjct: 361 IYVNDVLSRYDADALRYFLAIAGPENQDTDFTWAEFVRRNNDELVATWGNLVNRTLTNVY 420 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 K++ G +P PG + +D+++++ ++ + + + L++ + L +V+ Y Sbjct: 421 KNF-GSVPQPGDLSSADQALIAQVEAGIETVGKELDAARFKAGLSEAMRLAGQVNIYLSD 479 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Q+PW++ K + +RA+T+ Y + + L IL F+P + + + L Sbjct: 480 QEPWKVIKQDRERAATIWYTALRCVDTLKILFTPFLPFSSQHLHEYL 526 >gi|298242482|ref|ZP_06966289.1| methionyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] gi|297555536|gb|EFH89400.1| methionyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] Length = 558 Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 145/555 (26%), Positives = 250/555 (45%), Gaps = 58/555 (10%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E + + A Y H+G + AD AR+HR+ G VL +G+DEHG I A+ Sbjct: 3 EHILVCVAWPYAKTSTHVGQVVGAYLPADTFARYHRMAGNQVLMVSGSDEHGTPILVDAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ + FV + + ++ + L IS+D + T + H+ + + + DKG I+K Sbjct: 63 RQGISPREFVARYHQQICEVWERLGISWDLYTETGTENHYRITQDFFLTLYDKGYIFKDT 122 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG--------------------QYYNAQHN 155 Y D + D + Y A G + ++ + Sbjct: 123 MQSPYCPTDRRFLPDRYIEGTCPHCGYDSARGDQCDNCGKTLDPVDLIRPRCRLCGSKTS 182 Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 ++ + E +F L Q+ L + E P ++++K GL+ +++R D Sbjct: 183 TLEMRQTEHFFLDLPKLQEPLAEWLNQGKEHWRP-NTLAFALNWIKEGLRARAITRD-LD 240 Query: 216 WGIKIP----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL------- 260 WG+ IP +D + +YVW DA+ Y + + P+ K + P Sbjct: 241 WGVPIPIEGYEDKR--IYVWFDAVIGYFSASVEWAEKQGKPEAWKTWWVPGQTDPAVKAY 298 Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 + IGKD + FH I WPA LL N LP V ++ F+ G K S S GNVI +V+E Sbjct: 299 YFIGKDNIPFHTIIWPAMLLGYGNRNLPYDVPANEFMTMSGAKASSSRGNVIWTRDVLER 358 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 D LRY+L G+D + D + +R N +L GN V R+++ + + G++P Sbjct: 359 YSADTLRYYLSATAPEGRDTDFTFDEMLRRNNDELVATYGNAVHRTLTFLQSKFGGVVPE 418 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 P E+D +IL+ R +++ +++ + L + + +RY D Q PW+ K Sbjct: 419 PRELNEADRAILAEVERGYKQVAHSIEQCHLKDGLQAAMVVARAANRYLDEQAPWKQIKV 478 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLKPGFM 498 + + A T +YV ++V+ L IL ++P + K+ + L F D ++ Q+ Q G Sbjct: 479 DREAAGTTIYVMLQVLSALRILFCPYLPFSSQKLHEYLGFTGDVSK--QAWRQE---GVA 533 Query: 499 LHKTFD---PIFPRF 510 + T P+FP+ Sbjct: 534 ANATLPKPAPLFPKL 548 >gi|42523229|ref|NP_968609.1| methionyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100] gi|68565985|sp|Q6MMA3|SYM_BDEBA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|39575434|emb|CAE79602.1| metG [Bdellovibrio bacteriovorus HD100] Length = 687 Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 138/510 (27%), Positives = 233/510 (45%), Gaps = 41/510 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ K+ I+ A+ Y N H+GH E + AD ARF + G + +F D HG I Sbjct: 1 MNDKRKILITCALPYANGYIHLGHLVEYLQADFWARFQNMRGNECVFICADDTHGTPIMV 60 Query: 61 AAQNAGVTTKVFVDQNSR-NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + + Q+ + + +D AD + + F T + + C +KK+ + Sbjct: 61 KARELGITPEALIAQSYKEHTQDFAD-FQVQFSHFGSTNSEENRLLCEYFYKKMQEGNHT 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQYYN------AQHNPVQ---------- 158 Y D+ + D V GA QY + + ++P Sbjct: 120 RSQPIQQMYCNHDKMFLPDRFVKGTCPKCGAKEQYGDSCDVCASTYSPSDMKDVHCSLCG 179 Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + E FF+L+ ++ L + H E +++ + LKDL +SR Sbjct: 180 TAPVMKDSESIFFKLNDFKQYLEEWIPKH----CSPEISKKMLEWFNEDLKDLDISRDEP 235 Query: 215 DWGIKIPD-DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FW--PAD--LHVIGKDIL 268 +G IP + + YVW+DA Y++TT G K W P+ H IGKDI Sbjct: 236 YFGFAIPGTNNKKFFYVWVDAPMGYMSTTEQWAKSQGKTLKDIWQDPSREIYHFIGKDIA 295 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 RFH I+WPAFL +A P +VF HG ++ GEK+SKS G I + + + LRY+ Sbjct: 296 RFHTIFWPAFLKAAEFRSPNQVFVHGHLMVNGEKMSKSKGTFIAARTYLNHLNPEYLRYY 355 Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 +++ D + + RVN++L I NL SR M+ K DG + P A Sbjct: 356 YSTKLSSSVDDIDLNLEDFTNRVNSELVGKITNLGSRGGQMLKKKMDGKMSVPDA---EG 412 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 + ++ + + I + + + +AL ++ L + ++YFD + PW+ + +P+ V Sbjct: 413 KKLIEHAQKTAESIAAHYEARDFAKALGEIRGLADDANKYFDEKAPWKTLEADPEGTKQV 472 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + T+ + R LAI L+ +P + K+ +L Sbjct: 473 ITTTLNMFRMLAIYLKPVLPFYSQKVAKLL 502 >gi|324114469|gb|EGC08438.1| methionyl-tRNA synthetase [Escherichia fergusonii B253] Length = 677 Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 133/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + +EI E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEEIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|148656167|ref|YP_001276372.1| methionyl-tRNA synthetase [Roseiflexus sp. RS-1] gi|187647763|sp|A5UUW9|SYM_ROSS1 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|148568277|gb|ABQ90422.1| methionyl-tRNA synthetase [Roseiflexus sp. RS-1] Length = 592 Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 141/526 (26%), Positives = 252/526 (47%), Gaps = 65/526 (12%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + + ++ A Y N H+GH A + ADV AR+ RL G VL +G+D HG I AA+ Sbjct: 3 DNILVAVAWPYANGPFHVGHIAGAYLPADVFARYQRLRGNRVLMVSGSDCHGTPITIAAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + + + F L IS+D F +T H+ ++ ++ + G +YK Sbjct: 63 REGITPQDVIRRYHPTFLKTFQTLGISFDLFTQTYTDNHYRVTTDIFLRLLENGYLYKET 122 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH----------------NPVQ 158 G YS + D V Y A G Q H PV Sbjct: 123 MVGSYSETLGRFLPDRFVEGTCPNCGYPRARGDQCDGCGHLHDPQDLIAPRSVLDGAPVT 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYES------HPEFILPIERRNEVISFVKSGLKDLSLSRK 212 + E E +F L+ + +L ++ +S P +L + ++++ GL+ +++R Sbjct: 183 FRETEHFFLDLAKLEPQLRAWLDSVDRSYWRPNTLLFTQ------NWLREGLRGRAITRD 236 Query: 213 TFDWGIKIP-DDPQYI---MYVWIDALTNYLTTT---------------GYLDNPDGSKA 253 +WG+ +P DDP + +YVW DA+ Y + + ++ PDGS Sbjct: 237 -LEWGVPVPVDDPTFKDKRIYVWFDAVIGYYSASIEWAQRSGAPDAWQEWWVCRPDGSS- 294 Query: 254 KFWPA-DLHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVI 311 PA + IGKD + FH I WPA L+ +L LP V ++ F+ +G+K+S S + Sbjct: 295 ---PARSYYFIGKDNIPFHTIIWPAILIGYGDLALPYDVPANEFLNLEGDKMSTSRNWAL 351 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 E+ E DA+RY+L+ +D + +RVN++L GNL +R +S+ + Sbjct: 352 WAPEIEERYQSDAIRYYLIANGPETRDSNWSWADFVQRVNSELVATWGNLANRVISLTHR 411 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 ++ G +P PGA ++D +++ + +++ ++ + AL + ++L ++Y Q Sbjct: 412 NF-GAVPQPGALIDADRQLIAATQQAFEQVTTLLEGVKLRAALQEAMALAQTANQYLSDQ 470 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +PW+L K++ +RA+TVL+V + + L L F+P + ++ ++L Sbjct: 471 EPWKLVKSDQERAATVLFVALRTVDTLKTLFCPFLPFSSQRLHELL 516 >gi|271969811|ref|YP_003344007.1| tRNA synthetase class I (I, L, M and V) [Streptosporangium roseum DSM 43021] gi|270512986|gb|ACZ91264.1| tRNA synthetase class I (I, L, M and V) [Streptosporangium roseum DSM 43021] Length = 593 Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 154/528 (29%), Positives = 243/528 (46%), Gaps = 67/528 (12%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +I TA+A+P N HIGH + +D+ +R+ R+ G VL +GTDEHG I A Sbjct: 4 HILTAVAWPYANGPRHIGHVSGFGVPSDMFSRYQRMVGNKVLMVSGTDEHGTPIQVQADK 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ + D+ +R + L +SYD F RTT H+ + ++K + + G I+ Sbjct: 64 EGVSARELADRYNRVIVEDLQALGLSYDLFTRTTTDNHYAVVQEIFKGLYENGYIFPKTT 123 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNA--QHNPVQ--------------W 159 G S D + Y A G Q N Q +P+Q + Sbjct: 124 MGAISPSTARTLPDRYIEGTCPICHYDSARGDQCDNCGNQLDPIQLINPVSKINGETPIF 183 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDW 216 +E E + L A+ + L S+ +S E R V+ F + L DL ++SR DW Sbjct: 184 VETEHFMLDLPAFAEVLGSWLQSKQG-----EWRPNVLKFALNLLGDLQPRAMSRD-LDW 237 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPA----DLHVI 263 G+ IP D P +YVW DA+ YL+ + +PD + ++W + + + Sbjct: 238 GVPIPLEGWSDQPNKRLYVWFDAVVGYLSASIEWARRSGDPDAWR-QWWQSPDARGYYFM 296 Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FHA WPA LL N L LP +V S F+ +G K S S Sbjct: 297 GKDNIVFHAEIWPALLLGYNGQGSRDGKPGALGTLNLPSEVVSSEFLTMEGRKFSSSRQV 356 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI + + DALRY++ +D + R N +L GNLV+RS+SM Sbjct: 357 VIYVRDFLARYDADALRYYIAVAGPESQDTDFTWSEFLNRNNGELVAAWGNLVNRSISMA 416 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 K++ G+IP G T++D ++L + + A + ++ E +RY Sbjct: 417 AKNF-GVIPEAGELTDADRAMLERSRAAFAKAGAEFEASRFKNATNEAFEVIREANRYLA 475 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Q+PW++K NP+R ++L+V ++V+ LL +P +NKI+ +L Sbjct: 476 EQEPWKIKD-NPERVKSILHVALQVVDDAKTLLTPVLPGSSNKIYAML 522 >gi|220980038|emb|CAP72230.1| Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) [Escherichia coli LF82] Length = 677 Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 136/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161 S Y ++ + D KG A QY A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IPD P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|283785919|ref|YP_003365784.1| Methionyl-tRNA synthetase [Citrobacter rodentium ICC168] gi|282949373|emb|CBG88984.1| Methionyl-tRNA synthetase [Citrobacter rodentium ICC168] Length = 677 Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 133/506 (26%), Positives = 235/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 VT + + + S+ + +ISYD++ T + + + +++ ++ + G I Sbjct: 66 LSVTPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRELSALIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IPD P YVW+DA Y+ + L + G A F W D H IGKDI+ F Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTASFDEYWKKDSSAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPE 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L + +RY D Q PW + K A + Sbjct: 418 LYKTFTDAATVIGEAWESREFGKAIREIMALADQANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503 >gi|1000351|gb|AAC44094.1| methionyl-tRNA synthetase [Mycoplasma pulmonis] Length = 281 Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 105/282 (37%), Positives = 160/282 (56%), Gaps = 6/282 (2%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ +YI+T I YP+ H+GH Y IA VL + ++ G + F+TG+DEHGQKI AQ Sbjct: 2 KKTIYITTPIYYPSGDLHLGHIYSTNIAWVLRNYKKIQGYETFFSTGSDEHGQKIFNKAQ 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 + T+ +VD+ + F D +I YD F RTT K H + R ++ K+ +K IY Sbjct: 62 ELKLETQDYVDRQANKFIDFWKKANIDYDFFARTTNKEHKEVVREIFHKLKEKNIIYLDK 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y G YS+ DE + + + K + ++ ++ + +EEE YFF L+ + D + + + Sbjct: 122 YVGLYSVSDEEFLTETQALKKDNKFFHPVSNHELIKIEEESYFFNLNLFIDWIKEFLDQ- 180 Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 + I NE+ S F+ GL++LS++R DWG+KI ++++YVW+DAL YLT Sbjct: 181 -DIISSKAIVNELKSNFINKGLENLSVTRIKLDWGMKIDQSSKHVIYVWLDALFQYLTNL 239 Query: 243 GYLDNPDGSKAKFWP---ADLHVIGKDILRFHAIYWPAFLLS 281 GY KFW +HV+GK+I RFH IYWP FL S Sbjct: 240 GYGSKNQSLYEKFWKNGDERVHVVGKEITRFHCIYWPIFLKS 281 >gi|160897286|ref|YP_001562868.1| methionyl-tRNA synthetase [Delftia acidovorans SPH-1] gi|160362870|gb|ABX34483.1| methionyl-tRNA synthetase [Delftia acidovorans SPH-1] Length = 717 Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 145/521 (27%), Positives = 240/521 (46%), Gaps = 50/521 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL+++TA+ Y N HIGH E I AD R R+ G V F D HG I AA+ A Sbjct: 34 KLFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVNFVGADDAHGAPIMIAAEKA 93 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T + FV + + D I++D++ T +H + +++ + G I Sbjct: 94 GKTPQQFVADIAAGRKQYLDGFHIAFDNWHNTDAPENHVLAQQIYRDLKAAGFIETRTIE 153 Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM-------------- 160 ++ + D + G + + +A + P + Sbjct: 154 QFFDTEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCSAVYAPTDLINPYSALSGAKPVLK 213 Query: 161 EEEGYFFRLSAYQD-KLLSYYESHPEFILPIERRNEVISF----------VKSGLKDLSL 209 E +FF+LS + + L+ + + + P E N++ + GL D + Sbjct: 214 SSEHFFFKLSDPRCVEFLTEWTQDGQHVQP-EVANKIKEWFGVRTNPDGTTSEGLGDWDI 272 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264 SR +GI+IPD P YVW+DA YL + L + G + + AD H IG Sbjct: 273 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDRRGEDYEAYMADPTLEQYHFIG 332 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIE-EVGV 322 KDI+ FH ++WPA L + P K+ HGF+ ++ GEK+SKS G +DP++ + ++ Sbjct: 333 KDIITFHTLFWPAMLKFSGRKTPTKICVHGFMTVNNGEKMSKSRGTGLDPLKYLGLQMNP 392 Query: 323 DALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + LRY+L ++ +D ++ D RVN+DL N+ SR+ I K +DG + G Sbjct: 393 EWLRYYLGAKLNGKNEDIDFNPDDFMARVNSDLIGKYVNIASRAAGFIAKRFDGKL---G 449 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 +E +++L+ + + + +N+ RA+ +++ L V+ Y DA KPWEL K Sbjct: 450 TVSEDGQALLAQLRGQSEAVVQAFENRDTARAVREIMQLCDRVNEYVDANKPWELAKQEG 509 Query: 442 --DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 R V +E R L I L+ +P +A ++ L VA Sbjct: 510 MDARLQDVCTTCIEAFRLLTIYLKPILPAVAEQVEGFLNVA 550 >gi|150024169|ref|YP_001294995.1| methionyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86] gi|187647753|sp|A6GVQ2|SYM_FLAPJ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|149770710|emb|CAL42174.1| Methionine--tRNA ligase [Flavobacterium psychrophilum JIP02/86] Length = 686 Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 147/506 (29%), Positives = 241/506 (47%), Gaps = 39/506 (7%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I+ A+ Y N HIGH A + +D+ +R+ RL G DV F G+DEHG I+ A+ G+ Sbjct: 10 ITAALPYTNGPIHIGHLAGVYMPSDIYSRYLRLQGKDVAFMCGSDEHGVAISMKAKKEGI 69 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + +D+ R IS+D++ RT+ K HHDT +KK+ DKGD + Sbjct: 70 TPQEVIDKYDGIIRKSFVDFGISFDNYSRTSAKIHHDTASEFFKKLYDKGDFIEEVTEQL 129 Query: 128 YSLRDEAYYNDDEVY----KGADGQYYNAQH-------------NPVQWMEEEG------ 164 Y + + + D V K + + Y Q NP + E Sbjct: 130 YDAKADQFLADRFVVGTCPKCGNEEAYGDQCEKCGSTLNATDLINPKSTITGETPIMKST 189 Query: 165 --YFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 +F L Y D L + E H P +V S++ GL+ +++R DWGI +P Sbjct: 190 KHWFLPLDRYSDFLTKWILEGHKSDWKP-NVYGQVKSWIDGGLEPRAVTRD-LDWGIDVP 247 Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRFHAIY 274 +YVW DA Y++ T +G + +W + +H IGKD + FH I Sbjct: 248 VAGAEGKKLYVWFDAPIGYISATKEWAAREGKDWELYWKNEDTKLVHFIGKDNIVFHCII 307 Query: 275 WPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLVR 331 +PA L + + LP V ++ F+ +G K+S S + E +E+ D LRY L Sbjct: 308 FPAMLKAEGSYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEDFPNQQDVLRYALTA 367 Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 KD + + R N +LA GN ++R V + K Y+G++PTP F+E DE+ L Sbjct: 368 NAPESKDNDFTWKDFQARNNNELAAIFGNFINRVVVLTNKYYEGVVPTPNKFSEVDEATL 427 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451 + I +++ AL +++++ ++Y ++PW++ KT+P+R T +YV Sbjct: 428 TELKAYPAVISSSIERYRFREALGELMNVARLGNKYLADEEPWKMVKTDPERVKTQMYVA 487 Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477 +++ L +L + F+P A K+ +L Sbjct: 488 LQIATALRVLCEPFLPFTAEKLNKML 513 >gi|283832453|ref|ZP_06352194.1| methionine--tRNA ligase [Citrobacter youngae ATCC 29220] gi|291072113|gb|EFE10222.1| methionine--tRNA ligase [Citrobacter youngae ATCC 29220] Length = 677 Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 132/506 (26%), Positives = 235/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHQVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + DISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + ++GL+ +SR + +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFEAGLQQWDISRDSPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D + Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVL----AAELADPA 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P LA ++ Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLAERV 503 >gi|116754198|ref|YP_843316.1| methionyl-tRNA synthetase [Methanosaeta thermophila PT] gi|121694646|sp|A0B7K2|SYM_METTP RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|116665649|gb|ABK14676.1| methionyl-tRNA synthetase [Methanosaeta thermophila PT] Length = 669 Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 130/496 (26%), Positives = 237/496 (47%), Gaps = 39/496 (7%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + + ++ + Y N HIGH + AD+ R R G DVLF G+D HG I A Sbjct: 4 DNDPILVTCGLPYANGPAHIGHLRTYVPADIFVRALRRMGHDVLFICGSDAHGTPIVVNA 63 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 ++ G++ + V+ ++F D+ +++ +D F T + +H + + + + ++G +Y Sbjct: 64 ESRGMSPRELVEFYHKHFEDVFRSINVRFDYFGCTDDPSNHHRTQEIVRALMERGHVYPK 123 Query: 123 CYSGWYSLRDEAYYND----------------DEVYKGAD-----GQYYNA----QHNPV 157 Y R E + D DE +G G+ +A Sbjct: 124 EIELAYCPRCERFLPDRYVEGICPYCGVPARGDECDQGCGRHLEPGEIKDAVCKVCGTRA 183 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 ++ ++ YFFRLSA+++ LL Y + RN + +V+ LKD ++R WG Sbjct: 184 EYRKQTHYFFRLSAFREFLLDYLQ---RLGGTASARNYALEWVRQELKDWCITR-NMSWG 239 Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD---LHVIGKDILRFHAI 273 +K P ++YVW+DA Y++ T G ++W +H IG DI+ H I Sbjct: 240 VKFPGSEDLVVYVWVDAPIGYISFTEEWCKAHGVPWERYWRGKSRIIHFIGGDIVYHHCI 299 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVR 331 +WPA L A LP V + G + +K SKS G V+ + + G+ D LRY+L Sbjct: 300 FWPAMLEGAGYTLPSDVVASGMLKIDDKKFSKSRGYVVWVKDDYLDQGLEPDYLRYYLAS 359 Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + K+ + L+++VN +L GN ++R+V+ +K++DG +P E D ++ Sbjct: 360 YTSHTKEVNFSWKILQEKVNTELVGAFGNFLNRAVTFAVKNFDGKVPE----GELDPEVM 415 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451 + ++ ++ RA V+SL + YF + +PW+L +++ A +VL Sbjct: 416 KRIEMSVGDVSSSLMEYEFKRASDAVLSLADYANTYFQSHEPWKLIRSDRRAAGSVLRNC 475 Query: 452 VEVIRQLAILLQAFVP 467 +++++ + IL++ F+P Sbjct: 476 LQMVKAMIILMEPFMP 491 >gi|332092688|gb|EGI97758.1| methionyl-tRNA synthetase [Shigella boydii 5216-82] Length = 677 Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 133/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPE 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L I L+ +PKL + Sbjct: 478 CSMGINLFRVLMIYLKPVLPKLTER 502 >gi|45357889|ref|NP_987446.1| methionyl-tRNA synthetase [Methanococcus maripaludis S2] gi|68565983|sp|Q6M0E5|SYM_METMP RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|45047449|emb|CAF29882.1| Methionyl-tRNA synthetase [Methanococcus maripaludis S2] Length = 663 Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 141/497 (28%), Positives = 227/497 (45%), Gaps = 50/497 (10%) Query: 9 ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 ++TA+AY N H+GHA I AD+ R+ +L G +V+ GTD HG I A+ GV Sbjct: 5 VTTALAYTNGPLHLGHARSTYIPADIFTRYLKLKGEEVIHVGGTDNHGVPITLTAEKEGV 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 VD+ + D L+I +D+F RT H +T + + K+ + G IY+ + Sbjct: 65 KPIDIVDRYHNAIKADLDSLNICFDNFGRTHSDIHIETAQEFYSKLKENGYIYEKEIEQF 124 Query: 128 YSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME--------------EE 163 Y + + Y D V +G + P + + Sbjct: 125 YCEKCDMYLADRYVEGICPFCEGEARGDHCEVCGRHLEPTELVNPYCIHCNSKPEIKRTT 184 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 YFF+LSA QD L Y E+ PE +P +N + +++ L D +SR WG+ IP Sbjct: 185 HYFFKLSAMQDSLKEYIENSPE--MPEHVKNMALRWIEE-LHDWDVSR-NIKWGVPIPGC 240 Query: 224 PQYIMYVWIDALTNYLTTTG---------YLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274 +MYVWI+A Y++ T +L+N D SK H IGKDI HA++ Sbjct: 241 DDQVMYVWIEAPIGYVSFTKQLGDIWKSYWLENTDDSKIS------HFIGKDITVHHAVF 294 Query: 275 WPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 WP L +P V S G++ + +K+S S V+ + +E D LRYF + Sbjct: 295 WPGILKGIGGYKMPNAVVSGGYLTLENKKMSTSKNWVVWVKDFVENFSSDYLRYFFMINA 354 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESIL 391 +D + D +KR+N +L + IGN R++ + + G P + D+ ++ Sbjct: 355 PLNRDTDFSWDDFQKRINTELIDIIGNFTHRTLVFTERKF-GSTPIVDLNQLKDEDKKLI 413 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451 S C + + ++ AL ++I L E + YF PW +K N +R V+Y Sbjct: 414 SKCDDTEKLVDSLIREYNFKDALMEIIHLAKEGNGYFQGMAPWAIK--NEERLKEVMYTC 471 Query: 452 VEVIRQLAILLQAFVPK 468 V++ + LL +F+P+ Sbjct: 472 SVVLKYIIYLLSSFMPE 488 >gi|150401049|ref|YP_001324815.1| methionyl-tRNA synthetase [Methanococcus aeolicus Nankai-3] gi|187647735|sp|A6UUN1|SYM_META3 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|150013752|gb|ABR56203.1| methionyl-tRNA synthetase [Methanococcus aeolicus Nankai-3] Length = 672 Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 140/515 (27%), Positives = 234/515 (45%), Gaps = 55/515 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K ++TA+AY N H+GHA I AD++ R+ +L G DV+ GTD HG I A+ Sbjct: 4 KYLLTTALAYTNGPLHLGHARSTYIPADIIKRYLKLKGNDVIHVGGTDNHGVPITLTAEK 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV + V++ + D L + +D + +T H + +KK+ + G IY+ Sbjct: 64 EGVKPEDIVNKYHNEIKRDLDNLSVEFDSYGKTHSDTHIQNAQEFYKKLKENGYIYEKEI 123 Query: 125 SGWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPV--------------QWM 160 +Y + + D V +G + P Q Sbjct: 124 EQFYCPDCDKFLADRYVEGSCPFCEGEARGDHCEVCGRHLEPTELVNPYCVICNATPQLK 183 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + YFF+LSA D L +Y ++ +P +N S+++ L D +SR WG+ I Sbjct: 184 KTTHYFFKLSALSDNLDNYVKNSN---MPDHIKNMAYSWIRE-LHDWDISR-GIKWGVPI 238 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDN-------------PDGSKAKFWPADLHVIGKDI 267 PDD +MYVW++A Y++ T + + + K W H IGKDI Sbjct: 239 PDDENQVMYVWLEAPIGYISFTKMMGDIWKEYWLKNNDNNTENQNTKIW----HFIGKDI 294 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 HA++WP LL LP +FS G++ +G+K+S S V+ + I+ D LR Sbjct: 295 TVHHAVFWPGMLLGHGEYNLPNSIFSGGYLTLEGKKMSTSKKWVVWVDDFIKYFDSDYLR 354 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGA 382 YFL+ +D + D +KR+N +L I N R++ + + G +P Sbjct: 355 YFLMANAPLNRDCDFSFDEFQKRINTELIAIIANFTHRALVFSHRKF-GALPVIDKPEEE 413 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 + D ++L CS +++ +NM + + AL +I L E + YF +PW + N Sbjct: 414 LNKEDLALLDKCSETIEKYNKNMMDCNLKDALVDIIHLAKEGNNYFQKMEPWTVDDEN-- 471 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 R +++V + + +A LL F+P N++ D++ Sbjct: 472 RLKQIMFVCGVITKHIAYLLYPFMPNKTNELLDLM 506 >gi|91775274|ref|YP_545030.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT] gi|91775418|ref|YP_545174.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT] gi|123451971|sp|Q1H2F4|SYM_METFK RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|91709261|gb|ABE49189.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT] gi|91709405|gb|ABE49333.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT] Length = 692 Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 148/541 (27%), Positives = 250/541 (46%), Gaps = 61/541 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL +++A+ Y N H+GH E + +D+ RF ++ G V + D HG I A+ Sbjct: 18 KLLVTSALPYANGSIHLGHMVEYVQSDIWVRFQKMQGHTVHYVCADDTHGTPIMLRAEKE 77 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + ++ ++ D +D L +++D++ T + + + +++ + G I Sbjct: 78 GITPEELIRRVHAEHYADFSDFL-VAFDNYYSTNSEENRELASQIYRALKANGKIATRTI 136 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWM------------ 160 +Y + D KG A QY ++ ++P + + Sbjct: 137 EQYYDPVKHMFL-PDRFIKGECPKCHAKDQYGDSCESCGTTYSPTELIAPYSAVSGAAPV 195 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E YFF+LS +D L + S L E N++ + SGL D +SR +G Sbjct: 196 RKETEHYFFKLSECEDFLRQWTRSG---TLQPEAANKMGEWFASGLSDWDISRDAPYFGF 252 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHA 272 +IPD P YVW+DA Y+ + L +G ++W D H IGKDIL FHA Sbjct: 253 EIPDAPGKYFYVWLDAPIGYMASFKDLATREGLDFDEYWKPDSQAELYHFIGKDILYFHA 312 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-GVDALRYFLVR 331 ++WPA L + P KVF+HGF+ GEK+SKS G I ++ V + LRY+ Sbjct: 313 LFWPATLKFSGYRQPTKVFAHGFLTVNGEKMSKSRGTFITARSYLDHVKNPEYLRYYYAA 372 Query: 332 EI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ +D + + RVN+DL N+ SR+ I K +DG + T G + ++ Sbjct: 373 KLNGSMEDIDLNLEDFVARVNSDLVGKYVNIASRTAGFIAKRFDGKLGTVG-----ENAV 427 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448 ++ IRE+ +N+ RA+ +++L + + Y PW++ K A+ V Sbjct: 428 IAELRAAADSIRESFENRDTARAVRDIMALADKANAYVAEHAPWDMAKQPEQTAALHAVC 487 Query: 449 YVTVEVIRQLAILLQAFVPKLANKI-----FDILFVADENR---------CFQSLDQRLK 494 V +E+ R L + L+ +P LA + D L AD +R +Q L R+ Sbjct: 488 SVALEMFRLLTLYLKPVLPGLAQAVEKFLKIDPLTWADIDRPLPAGHQIQAYQHLITRID 547 Query: 495 P 495 P Sbjct: 548 P 548 >gi|300114645|ref|YP_003761220.1| methionyl-tRNA synthetase [Nitrosococcus watsonii C-113] gi|299540582|gb|ADJ28899.1| methionyl-tRNA synthetase [Nitrosococcus watsonii C-113] Length = 674 Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 138/507 (27%), Positives = 233/507 (45%), Gaps = 53/507 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N H+GH E I D+ RF R+ G + + D HG I AQ Sbjct: 4 RILVTSALPYANGPIHLGHLVEYIQTDIWVRFQRMRGHECYYVCADDAHGTPIMLRAQQE 63 Query: 66 GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++Q S+ + D AD IS+D + T + ++ + DKG I Sbjct: 64 GITPETLIEQCSQEHQADFAD-FAISFDSYYSTHSAENRALSETIYLRNRDKGHITTRIV 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQW-------------- 159 Y E + D + G + + A ++P + Sbjct: 123 RQAYDPIREMFLPDRFIRGTCPRCNALDQYGDNCEVCGATYSPTELKEAISVLSGTPPIE 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E YFF+LS ++ L + + L E N++ + ++GL+D +SR +G Sbjct: 183 RESEHYFFKLSDFEPLLKRWTQGGH---LQSEMANKLNEWFEAGLQDWDISRDAPYFGFP 239 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG----------SKAKFWPADLHVIGKDILR 269 IPD YVW+DA YL + +L + +G S A+ + H IGKDIL Sbjct: 240 IPDSTDKYFYVWLDAPIGYLASFKHLCDREGLDFDAFMAPDSTAELY----HFIGKDILY 295 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FHA++WPA L A LP +F+HGF+ G+K+SKS G I + + + LRY+ Sbjct: 296 FHALFWPAMLHGAGFRLPTAIFAHGFLTVNGQKMSKSRGTFIKARTYLNHLNPEYLRYYF 355 Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 ++ G +D + D R+NADL + N+ SR I K + + A ++E Sbjct: 356 AAKLGSGIEDLDLNFDDFMARINADLVGKVVNIASRCAGFINKHFQNRL----ADRLAEE 411 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR---AS 445 S+ + + + ++ +++ A+ ++++L + +RY D Q+PW K +P R Sbjct: 412 SLFQKFAAASEHLAQHYESREFGHAMREIMALADQANRYIDEQQPWVAIK-DPARKLEVQ 470 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472 V + + + RQL I L+ +P A K Sbjct: 471 EVCTLGLNLFRQLIIYLKPVLPVTAEK 497 >gi|315109299|gb|EFT81275.1| methionyl-tRNA synthetase [Propionibacterium acnes HL030PA2] Length = 601 Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 147/530 (27%), Positives = 243/530 (45%), Gaps = 73/530 (13%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + A+A+P N HIGH + +DV AR+ R+ G VL +G+D HG I+ A Sbjct: 14 VLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 73 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT + ++ R L +SYD + T H D + ++ ++ + G + K Sbjct: 74 GVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLTDNHADVTQEIFTRLHENGYVVKRSEM 133 Query: 126 GWY------SLRDE--------AYYNDDEVYKGADGQYYNAQHNPV-------------- 157 G + +L D Y+D +G Q +P Sbjct: 134 GAFEPSTGRTLPDRYIEGTCPVCGYDD---ARGDQCDNCGRQLDPADLIDPRSKTTGAAP 190 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215 ++ E E +F L A + L S+ ++ ++ R V+ F + L++L T D Sbjct: 191 EFRETEHFFLDLPALAESLASWIDTRTDW------RPNVLKFSHNLLEELRPRAITRDLD 244 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262 WGI++P D+P +YVW DA+ YL+ + + PD + +FW + Sbjct: 245 WGIRVPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYF 303 Query: 263 IGKDILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSL 307 +GKD + FH++ WP LL N L LP ++ S F+ G K+S S Sbjct: 304 MGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSR 363 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 G I + + E G DALRYF+ +D + + +RVN +LAN GNLV+RS+S Sbjct: 364 GATIFVGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSIS 423 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 M K+ IP G T++D +L + + + + A+ + + +V + Y Sbjct: 424 MAFKNCH-EIPAAGELTDADRELLDAAATGFDTVGGLLAHARFKAAITEAMRIVGLANAY 482 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A++PW+LK NP+R TVL+V ++V+ + ++ F+P A KI++ L Sbjct: 483 ISAEEPWKLKD-NPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEAL 531 >gi|293411862|ref|ZP_06654587.1| methionyl-tRNA synthetase [Escherichia coli B354] gi|291469417|gb|EFF11906.1| methionyl-tRNA synthetase [Escherichia coli B354] Length = 616 Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 135/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 28 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 87 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 88 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 147 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161 S Y ++ + D KG A QY A ++P + +E Sbjct: 148 SQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 206 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 207 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 263 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 264 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 323 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 324 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 383 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 384 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 439 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 440 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 499 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 500 CSMGINLFRVLMTYLKPVLPKLTER 524 >gi|32491285|ref|NP_871539.1| methionyl-tRNA synthetase [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|68566006|sp|Q8D219|SYM_WIGBR RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|25166492|dbj|BAC24682.1| metG [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 550 Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 136/516 (26%), Positives = 248/516 (48%), Gaps = 43/516 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M+ R+K+ + A Y N HIGH E I AD+ RF+R+ G ++ F D HG I Sbjct: 1 MQNRKKILTTCAFPYANGSLHIGHILEHIQADIWVRFNRMIGNEIYFICADDSHGTPIMI 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ ++ + V + ++ +ISYD++ T K ++ C++++K + K I+ Sbjct: 61 KAKKNKISPEKMVFLFYKEHKNDLSKFNISYDNYYLTHSKENYRFCKLIYKLLKRKKLIF 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQH------------NPVQWMEE- 162 S +Y + + +D + ++ QY + + NP+ + + Sbjct: 121 SKYISQFYDCKINMFLSDRLIQGKCPECNSEKQYSDNCNICGANYCSTDVINPISILSKS 180 Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 + FF L ++ L + S +L E +V + K+GLK +SR Sbjct: 181 VPIIKKSKHLFFDLPKFEKFLKKWIHSG---VLKKENLRKVSEWFKNGLKPWDISRDAPY 237 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDIL 268 +G KIP++ + YVW+DA YL+T L + ++FW + IGKD++ Sbjct: 238 FGFKIPNEKEKYFYVWLDAPIGYLSTFKNLCDKKEKIFFSEFWDVNSKSEIYQFIGKDVI 297 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH+++WPA L NL P K+F HG + GEK+SKS G VI ++ D LRY+ Sbjct: 298 YFHSLFWPAILHGINLKKPTKLFVHGHVTLNGEKMSKSNGFVIKAKTYLKYCDSDFLRYY 357 Query: 329 LVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 +I +C KD + +VN+++ N I NL SRS S I K ++G + ++ + Sbjct: 358 FSMKISSCAKDIDFSLSDFMNKVNSNIINKIVNLASRSSSFIDKYFEGYL----SYKIEN 413 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 + + + ++I + Q+ I + ++I L ++YF+ + PW+L + + D+ + + Sbjct: 414 YELYCKFTSLKEKINKYFQSNNISFIIYEIIKLAELANQYFNKKSPWKLTEESKDKRNKL 473 Query: 448 LYVT---VEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++ + + + I L+ +P L+ K D L ++ Sbjct: 474 HEISSMGINMFYIIMIYLKPILPNLSKKTEDFLNIS 509 >gi|289424927|ref|ZP_06426706.1| methionine--tRNA ligase [Propionibacterium acnes SK187] gi|289427634|ref|ZP_06429346.1| methionine--tRNA ligase [Propionibacterium acnes J165] gi|295131252|ref|YP_003581915.1| methionine--tRNA ligase [Propionibacterium acnes SK137] gi|289154626|gb|EFD03312.1| methionine--tRNA ligase [Propionibacterium acnes SK187] gi|289159125|gb|EFD07317.1| methionine--tRNA ligase [Propionibacterium acnes J165] gi|291377079|gb|ADE00934.1| methionine--tRNA ligase [Propionibacterium acnes SK137] gi|313763264|gb|EFS34628.1| methionyl-tRNA synthetase [Propionibacterium acnes HL013PA1] gi|313773242|gb|EFS39208.1| methionyl-tRNA synthetase [Propionibacterium acnes HL074PA1] gi|313801126|gb|EFS42392.1| methionyl-tRNA synthetase [Propionibacterium acnes HL110PA2] gi|313808697|gb|EFS47151.1| methionyl-tRNA synthetase [Propionibacterium acnes HL087PA2] gi|313812158|gb|EFS49872.1| methionyl-tRNA synthetase [Propionibacterium acnes HL025PA1] gi|313817877|gb|EFS55591.1| methionyl-tRNA synthetase [Propionibacterium acnes HL046PA2] gi|313819790|gb|EFS57504.1| methionyl-tRNA synthetase [Propionibacterium acnes HL036PA1] gi|313823448|gb|EFS61162.1| methionyl-tRNA synthetase [Propionibacterium acnes HL036PA2] gi|313824921|gb|EFS62635.1| methionyl-tRNA synthetase [Propionibacterium acnes HL063PA1] gi|313830175|gb|EFS67889.1| methionyl-tRNA synthetase [Propionibacterium acnes HL007PA1] gi|313833098|gb|EFS70812.1| methionyl-tRNA synthetase [Propionibacterium acnes HL056PA1] gi|314919474|gb|EFS83305.1| methionyl-tRNA synthetase [Propionibacterium acnes HL050PA3] gi|314925899|gb|EFS89730.1| methionyl-tRNA synthetase [Propionibacterium acnes HL036PA3] gi|314960728|gb|EFT04829.1| methionyl-tRNA synthetase [Propionibacterium acnes HL002PA2] gi|314963400|gb|EFT07500.1| methionyl-tRNA synthetase [Propionibacterium acnes HL082PA1] gi|314968947|gb|EFT13045.1| methionyl-tRNA synthetase [Propionibacterium acnes HL037PA1] gi|314979438|gb|EFT23532.1| methionyl-tRNA synthetase [Propionibacterium acnes HL072PA2] gi|314984228|gb|EFT28320.1| methionyl-tRNA synthetase [Propionibacterium acnes HL005PA1] gi|315077250|gb|EFT49312.1| methionyl-tRNA synthetase [Propionibacterium acnes HL053PA2] gi|315083259|gb|EFT55235.1| methionyl-tRNA synthetase [Propionibacterium acnes HL027PA2] gi|315096776|gb|EFT68752.1| methionyl-tRNA synthetase [Propionibacterium acnes HL038PA1] gi|315097846|gb|EFT69822.1| methionyl-tRNA synthetase [Propionibacterium acnes HL059PA2] gi|315100751|gb|EFT72727.1| methionyl-tRNA synthetase [Propionibacterium acnes HL046PA1] gi|327325498|gb|EGE67301.1| methionine--tRNA ligase [Propionibacterium acnes HL096PA3] gi|327449504|gb|EGE96158.1| methionyl-tRNA synthetase [Propionibacterium acnes HL013PA2] gi|327451674|gb|EGE98328.1| methionyl-tRNA synthetase [Propionibacterium acnes HL092PA1] gi|327452137|gb|EGE98791.1| methionyl-tRNA synthetase [Propionibacterium acnes HL083PA2] gi|328752392|gb|EGF66008.1| methionyl-tRNA synthetase [Propionibacterium acnes HL087PA1] Length = 601 Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 147/530 (27%), Positives = 243/530 (45%), Gaps = 73/530 (13%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + A+A+P N HIGH + +DV AR+ R+ G VL +G+D HG I+ A Sbjct: 14 VLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 73 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT + ++ R L +SYD + T H D + ++ ++ + G + K Sbjct: 74 GVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLTDNHADVTQEIFTRLHENGYVVKRSEM 133 Query: 126 GWY------SLRDE--------AYYNDDEVYKGADGQYYNAQHNPV-------------- 157 G + +L D Y+D +G Q +P Sbjct: 134 GAFEPSTGRTLPDRYIEGTCPVCGYDD---ARGDQCDNCGRQLDPADLIDPRSKTTGAAP 190 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215 ++ E E +F L A + L S+ ++ ++ R V+ F + L++L T D Sbjct: 191 EFRETEHFFLDLPALAESLASWIDTRTDW------RPNVLKFSHNLLEELRPRAITRDLD 244 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262 WGI++P D+P +YVW DA+ YL+ + + PD + +FW + Sbjct: 245 WGIRVPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYF 303 Query: 263 IGKDILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSL 307 +GKD + FH++ WP LL N L LP ++ S F+ G K+S S Sbjct: 304 MGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSR 363 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 G I + + E G DALRYF+ +D + + +RVN +LAN GNLV+RS+S Sbjct: 364 GATIFVGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSIS 423 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 M K+ IP G T++D +L + + + + A+ + + +V + Y Sbjct: 424 MAFKNCH-EIPAAGELTDADRELLDAAATGFDTVGGLLAHARFKAAITEAMRIVGLANAY 482 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A++PW+LK NP+R TVL+V ++V+ + ++ F+P A KI++ L Sbjct: 483 ISAEEPWKLKD-NPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEAL 531 >gi|314930233|gb|EFS94064.1| methionyl-tRNA synthetase [Propionibacterium acnes HL067PA1] Length = 601 Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 147/530 (27%), Positives = 243/530 (45%), Gaps = 73/530 (13%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + A+A+P N HIGH + +DV AR+ R+ G VL +G+D HG I+ A Sbjct: 14 VLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 73 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT + ++ R L +SYD + T H D + ++ ++ + G + K Sbjct: 74 GVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLTDNHADVTQEIFTRLHENGYVVKRSEM 133 Query: 126 GWY------SLRDE--------AYYNDDEVYKGADGQYYNAQHNPV-------------- 157 G + +L D Y+D +G Q +P Sbjct: 134 GAFEPSTGRTLPDRYIEGTCPVCGYDD---ARGDQCDNCGRQLDPADLIDPRSKTTGAAP 190 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215 ++ E E +F L A + L S+ ++ ++ R V+ F + L++L T D Sbjct: 191 EFRETEHFFLDLPALAESLASWIDTRTDW------RPNVLKFSHNLLEELRPRAITRDLD 244 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262 WGI++P D+P +YVW DA+ YL+ + + PD + +FW + Sbjct: 245 WGIRVPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYF 303 Query: 263 IGKDILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSL 307 +GKD + FH++ WP LL N L LP ++ S F+ G K+S S Sbjct: 304 MGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSR 363 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 G I + + E G DALRYF+ +D + + +RVN +LAN GNLV+RS+S Sbjct: 364 GATIFVGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSIS 423 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 M K+ IP G T++D +L + + + + A+ + + +V + Y Sbjct: 424 MAFKNCH-EIPAAGELTDADRELLDTAATGFDTVGGLLAHARFKAAITEAMRIVGLANAY 482 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A++PW+LK NP+R TVL+V ++V+ + ++ F+P A KI++ L Sbjct: 483 ISAEEPWKLKD-NPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEAL 531 >gi|159036379|ref|YP_001535632.1| methionyl-tRNA synthetase [Salinispora arenicola CNS-205] gi|187647766|sp|A8M218|SYM_SALAI RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|157915214|gb|ABV96641.1| methionyl-tRNA synthetase [Salinispora arenicola CNS-205] Length = 600 Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 154/532 (28%), Positives = 240/532 (45%), Gaps = 68/532 (12%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ A+A+P N HIGH + +DV AR+ R+ G DVL +GTDEHG I A Sbjct: 3 HVLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMTGHDVLMVSGTDEHGTPIQVQADA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GVT + D+ +R L +SYD F RTT + H+ + L++ + G I Sbjct: 63 EGVTPRELADRYNRVIVADLHGLGLSYDLFTRTTTRNHYAVVQELFEGMYRNGYIVPKTT 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNA---QHNPV--------------QW 159 G S D + Y+ A G ++ Q +P+ ++ Sbjct: 123 MGAISPSTGRTLPDRYIEGTCPICGYESARGDQCDSCGNQLDPIDLRNPKSKINGETPEF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WG 217 +E E +F L A L + ++ + R V+ F K+ L DL T D WG Sbjct: 183 IETEHFFLDLPALAGVLRQWLDTREGW------RPNVLRFSKNLLDDLQPRAITRDLEWG 236 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD--------LH 261 + IP D +YVW DA+ YL+ + G ++W AD + Sbjct: 237 VPIPLEGWRDRGDKRIYVWFDAVIGYLSASIEWARRSGDPEAWRRWWSADGQGKDAPGYY 296 Query: 262 VIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSL 307 +GKD + FH++ WPA L + LP +V S F+ +G K S S Sbjct: 297 FMGKDNIVFHSVIWPALLAGYSGEGSRDGQPGELGRMNLPTEVVSSEFLTMEGRKFSSSR 356 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 VI + +E DALRYF+ D + +R N +L G GNLV+RS+S Sbjct: 357 RVVIYVRDFLERYDADALRYFIAVAGPESNDTDFTWAEFLRRNNDELVAGWGNLVNRSIS 416 Query: 368 MILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 M K++ + P P TE+DE++L+V + E + +A+ + + +V+E +R Sbjct: 417 MAAKNFGAIPPVDPAGLTEADEALLAVARAGFGAVGELIGRHRQKQAIGEAMKVVAEANR 476 Query: 427 YFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y Q PW+LK + + R T+L+V ++V+ LL F+P A KI ++L Sbjct: 477 YLSEQAPWKLKSEADRPRMGTILHVALQVVSDANTLLTPFLPHSAQKIHELL 528 >gi|302865243|ref|YP_003833880.1| methionyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] gi|302568102|gb|ADL44304.1| methionyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] Length = 600 Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 153/533 (28%), Positives = 242/533 (45%), Gaps = 70/533 (13%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ A+A+P N HIGH + +DV +R+ R+ G DVL +GTDEHG I A Sbjct: 3 HVLAAVAWPYANGPRHIGHVSGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPIQVQADA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GVT + D+ +R + L +SYD F RTT + H+ + L+ + G I Sbjct: 63 EGVTPRELADRYNRVIAEDLRALGLSYDLFTRTTTRNHYAVVQELFTGLHRNGYIVPKVT 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNA---QHNPV--------------QW 159 +G S D + Y A G + Q +P+ ++ Sbjct: 123 TGAISPSTGRTLPDRYIEGTCPICGYDSARGDQCDNCGNQLDPIDLIDPKSKINGETPEF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WG 217 +E E +F L A D L + ++ + R V+ F ++ L DL T D WG Sbjct: 183 VETEHFFLDLPALADALRQWLDTRDGW------RPNVLRFSRNLLDDLQPRAITRDLEWG 236 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD--------L 260 + IP D P +YVW DA+ YL+ + +P+ + K+W AD Sbjct: 237 VPIPLDDWRDRPDKRIYVWFDAVIGYLSASIEWARRTGDPEAWR-KWWSADGEGKDARSY 295 Query: 261 HVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKS 306 + +GKD + FH++ WPA L L LP +V S ++ +G K S S Sbjct: 296 YFMGKDNIVFHSVIWPALLGGYSGEGARDGEPGELGRLNLPTEVVSSEYLTMEGRKFSSS 355 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 VI + +E DALRYF+ D + +R N +L G GNLV+RSV Sbjct: 356 RKVVIYVRDFLERYDADALRYFIAVAGPESNDTDFTWAEFLRRNNDELVAGWGNLVNRSV 415 Query: 367 SMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 SM K++ + P P TE+D+++L+ + + + +A+ + + +V+E + Sbjct: 416 SMAAKNFGAIPPVDPAGLTEADQALLATAKAGFGVVGDLIARHRQKQAIGEAMKVVAEAN 475 Query: 426 RYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +Y Q PW+LK + R TVL+V ++V+ LL F+P A KI ++L Sbjct: 476 KYLSEQAPWKLKGEDEKPRMGTVLHVALQVVSDANTLLTPFLPHSAQKIHELL 528 >gi|149371072|ref|ZP_01890667.1| methionyl-tRNA synthetase [unidentified eubacterium SCB49] gi|149355858|gb|EDM44416.1| methionyl-tRNA synthetase [unidentified eubacterium SCB49] Length = 690 Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 138/516 (26%), Positives = 239/516 (46%), Gaps = 37/516 (7%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M++ ++ I+ A+ Y N HIGH A + AD+ ARF RL G DV F G+DEHG I Sbjct: 1 MQDPKRYTITAALPYTNGPVHIGHLAGVYVPADIYARFQRLQGKDVAFVCGSDEHGVPIT 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + VD+ + + +S+D++ RT+ K HHDT +KK+ D+G Sbjct: 61 IKAKKEGITPQQVVDKYHAIIKQSFEDFGVSFDNYSRTSAKVHHDTASDFFKKLYDEGKF 120 Query: 120 YKGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM-------- 160 + Y + + D +E G + HN + Sbjct: 121 IEEVTEQLYDAEADQFLADRFVIGTCPKCGNEESYGDQCEACGTSHNATDLINPKSAITG 180 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + +F L Y+ L + + + S++ GL+ +++R Sbjct: 181 AVPTLKETKHWFLPLDQYEPFLKEWILKEHKKDWKTNVYGQCKSWIDDGLRPRAVTRD-L 239 Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDI 267 DWGI +P + ++YVW DA Y++ T +G +W +D LH IGKD Sbjct: 240 DWGIPVPVEGADGKVLYVWFDAPIGYISATKEWAEKEGKDWEPYWKSDDTKLLHFIGKDN 299 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324 + FH I +P+ L + +P V ++ F+ +G KIS S + E +E+ D Sbjct: 300 IVFHCIIFPSMLKADGTYIMPDNVPANEFLNLEGNKISTSKNWAVWLHEYLEDFPGQQDV 359 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N +L GN ++R + K YDG++P P AF+ Sbjct: 360 LRYTLTANAPETKDNDFTWADFQARNNNELVAIFGNFINRVTVLTHKYYDGVVPAPAAFS 419 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 + DE L+ I +++ A +++++ ++Y ++PW+ K + +R Sbjct: 420 DVDEQTLTELKTYPAVIESSIERYRFREAQQELMNVARLGNKYLADEEPWKTIKVDEERT 479 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 T++YV +++ LA+L + F+P + K+ ++L V+ Sbjct: 480 KTIMYVALQIANALAVLSEPFLPFTSTKLKNMLNVS 515 >gi|326798841|ref|YP_004316660.1| methionyl-tRNA synthetase [Sphingobacterium sp. 21] gi|326549605|gb|ADZ77990.1| Methionyl-tRNA synthetase [Sphingobacterium sp. 21] Length = 688 Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 144/527 (27%), Positives = 248/527 (47%), Gaps = 48/527 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 MK+ ++ I++A+ Y N HIGH A I AD+ RF R++ +V F G+DEHG I Sbjct: 1 MKDFKRYTITSALPYANGPLHIGHLAGAYIPADIFVRFLRMNNKEVAFVCGSDEHGAAIT 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +D+ + ++ + IS+D + RT+ K HH+ + + + DKG+ Sbjct: 61 IKAKKEGITPQQIIDKYNAQIKESFEQFGISFDIYHRTSSKIHHELSQEFFLNLYDKGEF 120 Query: 120 YKGCYSGWYSLRDEAYYN--------------------DDEVYKGADGQYYNAQHNPVQW 159 + +Y DE Y+ D+ K NP Sbjct: 121 VEKYSEQYY---DEEYHQFLADRYIVGTCPNCHNEGAYGDQCEKCGTSLSPTDLINPKST 177 Query: 160 M--------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211 + E + ++ L YQ L + + IL + S++KSGL+ S++R Sbjct: 178 LSGKTPVLRETKHWYLPLDKYQAWLEKWLLEGKKDILKSNVYGQCSSWLKSGLQARSMTR 237 Query: 212 KTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW-----PAD---- 259 DWG+ +P + +YVW+DA Y++ T G K+W PAD Sbjct: 238 D-LDWGVDVPLEEAKGKKLYVWLDAPIGYISATKQWALDTGKDWEKYWKKQENPADDACL 296 Query: 260 LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 +H IGKD + FH I +P+ L + LP+ + ++ F+ +G+K+S S + + E + Sbjct: 297 IHFIGKDNIVFHCIIFPSILHAHGEYVLPENIPANEFLNLEGDKLSTSRNHAVWLHEYLA 356 Query: 319 EV--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 + D LRY L + D + + RVN +L GN ++R + + K +DG Sbjct: 357 DFPGKQDELRYVLTSILPETSDSEFTWKDFQARVNNELVAIFGNFINRVLVLSHKYFDGK 416 Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 + G ++ D+ +LS R + I ++ ALA +++ ++Y ++PW+L Sbjct: 417 VKAAGELSDKDKLVLSELERYPKTISSSLSQYRFREALAHFMNVARLGNKYLADEEPWKL 476 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 KT+ DR TVL + +++ LA+L Q F+P A K+F +L D + Sbjct: 477 IKTDEDRVKTVLNIGLQIAANLAVLAQPFLPHTAEKLFQMLNFQDRD 523 >gi|270346539|pdb|3H9C|A Chain A, Structure Of Methionyl-Trna Synthetase: Crystal Form 2 Length = 547 Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 5 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 64 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 65 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 124 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 125 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 183 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 184 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 240 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 241 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 300 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 301 HSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 360 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 361 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 417 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 476 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 477 CSMGINLFRVLMTYLKPVLPKLTER 501 >gi|315501788|ref|YP_004080675.1| methionyl-tRNA synthetase [Micromonospora sp. L5] gi|315408407|gb|ADU06524.1| methionyl-tRNA synthetase [Micromonospora sp. L5] Length = 600 Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 153/533 (28%), Positives = 241/533 (45%), Gaps = 70/533 (13%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ A+A+P N HIGH + +DV +R+ R+ G DVL +GTDEHG I A Sbjct: 3 HVLAAVAWPYANGPRHIGHVSGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPIQVQADA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GVT + D+ +R + L +SYD F RTT + H+ + L+ + G I Sbjct: 63 EGVTPRELADRYNRVIAEDLRALGLSYDLFTRTTTRNHYAVVQELFTGLHRNGYIVPKVT 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNA---QHNPV--------------QW 159 G S D + Y A G + Q +P+ ++ Sbjct: 123 IGAISPSTGRTLPDRYIEGTCPICGYDSARGDQCDNCGNQLDPIDLIDPKSKINGETPEF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WG 217 +E E +F L A D L + ++ + R V+ F ++ L DL T D WG Sbjct: 183 VETEHFFLDLPALADALRQWLDTRDGW------RPNVLRFSRNLLDDLQPRAITRDLEWG 236 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD--------L 260 + IP D P +YVW DA+ YL+ + +P+ + K+W AD Sbjct: 237 VPIPLDDWRDRPDKRIYVWFDAVIGYLSASIEWARRTGDPEAWR-KWWSADGEGKDARSY 295 Query: 261 HVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKS 306 + +GKD + FH++ WPA L L LP +V S ++ +G K S S Sbjct: 296 YFMGKDNIVFHSVIWPALLGGYSGEGARDGEPGELGRLNLPTEVVSSEYLTMEGRKFSSS 355 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 VI + +E DALRYF+ D + +R N +L G GNLV+RSV Sbjct: 356 RKVVIYVRDFLERYDADALRYFIAVAGPESNDTDFTWAEFLRRNNDELVAGWGNLVNRSV 415 Query: 367 SMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 SM K++ + P P TE+D+++L + + + + +A+ + + +V+E + Sbjct: 416 SMAAKNFGAIPPVDPAGLTEADQALLDIAKAGFATVGDLIARHRQKQAIGEAMKVVAEAN 475 Query: 426 RYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +Y Q PW+LK + R TVL+V ++V+ LL F+P A KI ++L Sbjct: 476 KYLSEQAPWKLKGEDEKPRMGTVLHVALQVVSDANTLLTPFLPHSAQKIHELL 528 >gi|323187874|gb|EFZ73170.1| methionyl-tRNA synthetase [Escherichia coli RN587/1] Length = 677 Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 135/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161 S Y ++ + D KG A QY A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|6730520|pdb|1QQT|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Length = 551 Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 5 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 64 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 65 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 124 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 125 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 183 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 184 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 240 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 241 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 300 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 301 HSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 360 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D + Sbjct: 361 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPA 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 417 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQAGRDADLQAI 476 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 477 CSMGINLFRVLMTYLKPVLPKLTER 501 >gi|319795385|ref|YP_004157025.1| methionyL-tRNA synthetase [Variovorax paradoxus EPS] gi|315597848|gb|ADU38914.1| methionyl-tRNA synthetase [Variovorax paradoxus EPS] Length = 700 Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 147/526 (27%), Positives = 241/526 (45%), Gaps = 68/526 (12%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M KL+++TA+ Y N + HIGH E I AD+ R R++G +V F D HG I Sbjct: 1 MSAPRKLFVTTALPYANGKFHIGHMMEYIQADIWVRNQRMNGAEVNFVCADDAHGAAITI 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--- 117 AA AGVT + FV + + + D IS+D++ T +H + +++ + G Sbjct: 61 AADKAGVTPQAFVAEIAAGRKPYLDGYYISFDNWHSTDAPENHQLAQDIYRDLRANGLIE 120 Query: 118 --------DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------- 160 D KG + ++ E + G + + A + P + + Sbjct: 121 TKSVEQFYDPEKGMFLADRFIKGECPNCHSKDQYGDNCEVCGAVYAPTELINPYSALSGA 180 Query: 161 -----EEEGYFFRLSAYQ-DKLLSYYESHPEFILPIERRNEVISFV------KSGLKDLS 208 + +FF+LS + + L + + P + E +N++ ++ K GL D Sbjct: 181 KPELRSSDHFFFKLSDPRCEAYLKEWTAAPGHVQS-EVQNKIREWLYKDDEGKGGLGDWD 239 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT-------------------TGYLDNPD 249 +SR +GI+IPD P YVW+DA YL + T Y+ +PD Sbjct: 240 ISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDKRCIELGGDGISYTEYMADPD 299 Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309 + +H IGKDI+ FH ++WPA L + P V+ HG + GEK+SKS G Sbjct: 300 LEQ-------VHFIGKDIITFHTLFWPAMLHFSGRKAPDAVYVHGHLTVSGEKMSKSRGT 352 Query: 310 VIDPIEVIEEVGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 IDP++ + +G+D LRY++ ++ +D ++ + RVN+DL N+ SR+ Sbjct: 353 GIDPLKYL-SIGLDPEWLRYYIAAKLNGRNEDIDFNPEDFVARVNSDLVGKYINIASRAA 411 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 I K + G + G + +++L +I + RAL +V++L +V+ Sbjct: 412 GFIGKRFGGKL---GEVSADGDALLFALREAAGQIHSLYDGRDYARALREVMALADKVNE 468 Query: 427 YFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 Y D KPWEL K+ R V V +E R L + L+ +P LA Sbjct: 469 YVDQNKPWELAKKEGAEARLHDVCTVCIEAFRLLTLYLKPVLPALA 514 >gi|13786940|pdb|1F4L|A Chain A, Crystal Structure Of The E.Coli Methionyl-Trna Synthetase Complexed With Methionine Length = 551 Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|319442718|ref|ZP_07991874.1| methionyl-tRNA synthetase [Corynebacterium variabile DSM 44702] Length = 621 Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 158/539 (29%), Positives = 256/539 (47%), Gaps = 77/539 (14%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ T++A+P N HIGH + +DV AR+ R+ G +VL +GTDEHG + AQ Sbjct: 4 HVLTSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMSGNEVLMVSGTDEHGTPLLVQAQK 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV + D+ +R + L +SYD F RTT + H+ + L++ ++D G + + Sbjct: 64 EGVPVQELADRYNRIIVEDLAGLGLSYDLFTRTTTRNHYAVVQELFRGLNDNGYMIRQTT 123 Query: 125 SG------WYSLRDEAYYNDDEVYKGADGQ-----YYNAQHNPVQ--------------W 159 G +L D + D + Q +P + Sbjct: 124 VGAIDPKTGRTLPDRFIEGTCPICGATDARGDQCDNCGNQLDPADLIDPRSKIDGATPDF 183 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDW 216 +E E + L A+ + L + + + R V++F + LKD+ ++SR DW Sbjct: 184 VETEHFMLDLPAFAEALEKWLSTREGW------RPNVLNFSLNLLKDMRPRAMSRD-IDW 236 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFW--PADL--HVIG 264 G+ +P D+ +YVW DA+ YL+ + G K K+W P L + +G Sbjct: 237 GVPVPIEGWQDNEAKKLYVWFDAVVGYLSASIEWAWRTGDKDAWKKWWSDPEALSYYFMG 296 Query: 265 KDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNV 310 KD + FH+ WPA LL L LP +V S F+ G K S S G V Sbjct: 297 KDNITFHSQIWPAELLGYAGNGAKGGEAGEYGELNLPTEVVSSEFLTMSGSKFSSSKGVV 356 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 I + ++E G DALRYF+ D + D +R+N +LAN GNLV+R+VSM Sbjct: 357 IYVRDFLQEFGPDALRYFIAVAGPENMDTDFTWDEFVRRINTELANEWGNLVNRTVSMAH 416 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 K++ G IPTPG FT D+++L + + E +++ +++ + +V+ ++Y A Sbjct: 417 KNF-GEIPTPGEFTAEDQALLDESAAAFGIVGEYLEHSRFKAGISEAMRIVARANQYIAA 475 Query: 431 QKPWELKK---------TNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Q+PW+L K +P +R STVL+ ++V+ LL ++P A KIF++L Sbjct: 476 QEPWKLAKAAKGTEDTAADPAARERLSTVLFTALQVVADANTLLTPYLPFSAQKIFELL 534 >gi|330013408|ref|ZP_08307631.1| methionine--tRNA ligase [Klebsiella sp. MS 92-3] gi|328533523|gb|EGF60248.1| methionine--tRNA ligase [Klebsiella sp. MS 92-3] Length = 670 Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + DISYD++ T + + +++ ++ + G I Sbjct: 69 LGITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160 S Y ++ + D KG + + A ++P + + Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPV 187 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D + Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGVL----AAELADPA 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E ++ +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYKTFTDAAESIGEAWDSREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P+LA + Sbjct: 481 CTMGLNMFRVLMTWLKPVLPQLAAR 505 >gi|46015192|pdb|1P7P|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed With Methionine Phosphonate gi|46015201|pdb|1PFU|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed With Methionine Phosphinate gi|46015202|pdb|1PFV|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed With Difluoromethionine gi|46015203|pdb|1PFW|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed With Trifluoromethionine gi|46015204|pdb|1PFY|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed With Methionyl Sulphamoyl Adenosine gi|46015205|pdb|1PG0|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed With Methioninyl Adenylate gi|46015206|pdb|1PG2|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed With Methionine And Adenosine Length = 551 Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 5 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 64 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 65 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 124 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 125 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 183 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 184 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 240 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 241 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 300 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 301 HSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 360 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 361 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 417 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 476 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 477 CSMGINLFRVLMTYLKPVLPKLTER 501 >gi|262040134|ref|ZP_06013387.1| methionine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042487|gb|EEW43505.1| methionine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 680 Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 235/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + DISYD++ T + + +++ ++ + G I Sbjct: 69 LGITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160 S Y ++ + D KG + + +A ++P + + Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCSATYSPTELIDPKSVVSGATPV 187 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D + Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGVL----AAELADPA 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E ++ +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYKTFTDAAESIGEAWDSREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P+LA + Sbjct: 481 CTMGLNMFRVLMTWLKPVLPQLAAR 505 >gi|191169956|ref|ZP_03031510.1| methionyl tRNA synthetase [Escherichia coli F11] gi|187649788|sp|Q0TFX8|SYM_ECOL5 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|190909472|gb|EDV69057.1| methionyl tRNA synthetase [Escherichia coli F11] Length = 677 Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G K+W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDKYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|82543475|ref|YP_407422.1| methionyl-tRNA synthetase [Shigella boydii Sb227] gi|123728409|sp|Q323B4|SYM_SHIBS RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|81244886|gb|ABB65594.1| methionine tRNA synthetase [Shigella boydii Sb227] gi|332097116|gb|EGJ02099.1| methionyl-tRNA synthetase [Shigella boydii 3594-74] Length = 677 Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQESRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|218559033|ref|YP_002391946.1| methionyl-tRNA synthetase [Escherichia coli S88] gi|30173163|sp|Q8FFX8|SYM_ECOL6 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|187649787|sp|A1ACX8|SYM_ECOK1 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|187649789|sp|Q1R9V8|SYM_ECOUT RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|226695277|sp|B7MEG9|SYM_ECO45 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|218365802|emb|CAR03542.1| methionyl-tRNA synthetase [Escherichia coli S88] gi|294491472|gb|ADE90228.1| methionyl-tRNA synthetase [Escherichia coli IHE3034] gi|307626341|gb|ADN70645.1| methionyl-tRNA synthetase [Escherichia coli UM146] gi|323951909|gb|EGB47783.1| methionyl-tRNA synthetase [Escherichia coli H252] gi|323956148|gb|EGB51900.1| methionyl-tRNA synthetase [Escherichia coli H263] Length = 677 Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G K+W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDKYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|238062568|ref|ZP_04607277.1| methionyl-tRNA synthetase [Micromonospora sp. ATCC 39149] gi|237884379|gb|EEP73207.1| methionyl-tRNA synthetase [Micromonospora sp. ATCC 39149] Length = 603 Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 154/533 (28%), Positives = 242/533 (45%), Gaps = 70/533 (13%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ A+A+P N HIGH + +DV AR+ R+ G DVL +GTDEHG I A Sbjct: 6 HVLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMAGHDVLMVSGTDEHGTPIQVQADA 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GVT + D+ +R + L +SYD F RTT + H+ + L+ + G I Sbjct: 66 EGVTPRELADRYNRVIAEDLRALGLSYDLFTRTTTRNHYAVVQELFSGLHRNGYIVPKVT 125 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNA--QHNPV--------------QW 159 +G S D + Y A G Q N Q +PV ++ Sbjct: 126 TGAISPSTGRTLPDRYIEGTCPICGYDSARGDQCDNCGNQLDPVDLINPKSKINGETPEF 185 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WG 217 +E E +F L A D L + + + R V+ F ++ L DL T D WG Sbjct: 186 VETEHFFLDLPALADALRRWLDGREGW------RPNVLRFSRNLLDDLQPRAITRDLEWG 239 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL-------- 260 + IP D P +YVW DA+ YL+ + +P+ + ++W D Sbjct: 240 VPIPLDGWRDRPDKRIYVWFDAVIGYLSASIEWARRTGDPEAWR-RWWSVDAEGKDALSY 298 Query: 261 HVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKS 306 + +GKD + FH++ WPA L L LP +V S ++ +G K S S Sbjct: 299 YFMGKDNIVFHSVIWPALLGGYSGAGDRDGEPGALGRLNLPTEVVSSEYLTMEGRKFSSS 358 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 VI + +E DALRYF+ D + +R N +L G GNLV+RSV Sbjct: 359 RKVVIYVRDFLERYDADALRYFIAVAGPESNDTDFTWAEFLRRNNDELVAGWGNLVNRSV 418 Query: 367 SMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 SM K++ + P P TE+DE++L+ + + + +A+ + + +V+E + Sbjct: 419 SMAAKNFGAIPPVDPAGLTEADEALLATARVGFDTVGDLIGRHRQKQAIGEAMRVVAEAN 478 Query: 426 RYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +Y Q PW+LK+ + R T+L+V ++V+ LL F+P A +I ++L Sbjct: 479 KYLSEQAPWKLKEPADKPRMGTILHVALQVVSDANTLLTPFLPHSAQQIHELL 531 >gi|237748784|ref|ZP_04579264.1| methionyl-tRNA synthetase [Oxalobacter formigenes OXCC13] gi|229380146|gb|EEO30237.1| methionyl-tRNA synthetase [Oxalobacter formigenes OXCC13] Length = 695 Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 161/528 (30%), Positives = 248/528 (46%), Gaps = 73/528 (13%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DG--LDVLFTTGTDEHGQKIAK 60 KL+++TA+ Y NA HIGH E I AD+ RF R+ DG +V F D HG I Sbjct: 4 KLFVTTALPYANAPFHIGHIMEYIQADIWVRFQRMQKDDGKQREVHFVGADDVHGAPIMI 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ AG T + FV + + + + IS+D++ T +++ R +++++ KG I Sbjct: 64 AAEKAGKTPQEFVAEIAAGRKAPLNGFLISFDNWHSTDGPENYELSREIYRRLKAKGLIV 123 Query: 121 KGCYSGWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWM--- 160 ++ E + D E K GA QY + NP + Sbjct: 124 SRTIEQFFDPVKEMFLPDRYIKGECPKCGAKDQYGDTCEVCSTVYAPTELKNPYSILTGA 183 Query: 161 -----EEEGYFFRLSAYQ------DKLLSYYESHPEFILPIERRNEVISFVK------SG 203 + E +FFRLS Q + L HP L E N+ +++ + Sbjct: 184 TPVMKQSEHFFFRLSDPQCTEFLKEWTLGKVNGHPR--LQPEVANKAREWLQGKDGEENA 241 Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA-------LTNYLTTTG-----YLDNPDGS 251 L D +SR +GI+IPD P YVW+DA L NY + TG ++ +P+ Sbjct: 242 LSDWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNYFSKTGGDYDAFMADPETE 301 Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311 + H IGKDI+ FH ++WPA L A++ +P V+ HGFI GEK+SKS G I Sbjct: 302 Q-------YHFIGKDIIYFHTLFWPAMLHFADMRVPNNVYVHGFITVGGEKMSKSRGTGI 354 Query: 312 DPIEVIEEVGVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 P+ + ++G++ LRY+L +++ +D + + RVNADL N+ SR+ Sbjct: 355 SPLRYL-DIGMNPEWLRYYLAAKLSDRVEDLDFTGEDFIARVNADLIGKYVNIASRAAGF 413 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428 I K + G + A D IL EI E + + +AL Q++ L EV+ Y Sbjct: 414 ITKRFGGKLAAGWAL--KDTPILDNLRAAAPEIAELYEAREFGKALRQIMHLADEVNAYV 471 Query: 429 DAQKPWELKKTNPDRASTVLYVT---VEVIRQLAILLQAFVPKLANKI 473 D KPW L K +P++ + V +E R L I L+ +P +A K+ Sbjct: 472 DEHKPWVLAK-DPEKTEELHQVCTRLLEAFRLLTIYLKPVLPAVAEKV 518 >gi|323934275|gb|EGB30697.1| methionyl-tRNA synthetase [Escherichia coli E1520] Length = 677 Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 135/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161 S Y ++ + D KG A QY A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|26248490|ref|NP_754530.1| methionyl-tRNA synthetase [Escherichia coli CFT073] gi|91211401|ref|YP_541387.1| methionyl-tRNA synthetase [Escherichia coli UTI89] gi|117624319|ref|YP_853232.1| methionyl-tRNA synthetase [Escherichia coli APEC O1] gi|227887166|ref|ZP_04004971.1| methionyl-tRNA synthetase [Escherichia coli 83972] gi|237704573|ref|ZP_04535054.1| methionyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] gi|300978881|ref|ZP_07174394.1| methionyl-tRNA synthetase [Escherichia coli MS 45-1] gi|301048843|ref|ZP_07195839.1| methionyl-tRNA synthetase [Escherichia coli MS 185-1] gi|26108895|gb|AAN81098.1|AE016763_57 Methionyl-tRNA synthetase [Escherichia coli CFT073] gi|91072975|gb|ABE07856.1| methionyl-tRNA synthetase [Escherichia coli UTI89] gi|115513443|gb|ABJ01518.1| methionyl-tRNA synthetase [Escherichia coli APEC O1] gi|226900939|gb|EEH87198.1| methionyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] gi|227835516|gb|EEJ45982.1| methionyl-tRNA synthetase [Escherichia coli 83972] gi|300299357|gb|EFJ55742.1| methionyl-tRNA synthetase [Escherichia coli MS 185-1] gi|300409514|gb|EFJ93052.1| methionyl-tRNA synthetase [Escherichia coli MS 45-1] gi|307554183|gb|ADN46958.1| methionyl-tRNA synthetase [Escherichia coli ABU 83972] gi|315285705|gb|EFU45145.1| methionyl-tRNA synthetase [Escherichia coli MS 110-3] gi|315294365|gb|EFU53713.1| methionyl-tRNA synthetase [Escherichia coli MS 153-1] Length = 680 Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 69 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G K+W D H IGKDI+ F Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDKYWKKDSTAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505 >gi|215487336|ref|YP_002329767.1| methionyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69] gi|312968928|ref|ZP_07783135.1| methionyl-tRNA synthetase [Escherichia coli 2362-75] gi|254782861|sp|B7UFD1|SYM_ECO27 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|215265408|emb|CAS09808.1| methionyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69] gi|312286330|gb|EFR14243.1| methionyl-tRNA synthetase [Escherichia coli 2362-75] Length = 677 Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 135/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161 S Y ++ + D KG A QY A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|153207562|ref|ZP_01946245.1| methionyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|212217981|ref|YP_002304768.1| methionyl-tRNA synthetase [Coxiella burnetii CbuK_Q154] gi|238064875|sp|B6J4V8|SYM_COXB1 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|120576530|gb|EAX33154.1| methionyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|212012243|gb|ACJ19623.1| methionyl-tRNA synthetase [Coxiella burnetii CbuK_Q154] Length = 546 Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 150/547 (27%), Positives = 243/547 (44%), Gaps = 52/547 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E+ ++ ++ A+ Y N H+GH E I AD+ RF RL G D LF G D HG I A Sbjct: 4 EKRQILVTAALPYANGPIHLGHMVEHIQADIWVRFQRLKGNDCLFICGEDAHGTAIMITA 63 Query: 63 QNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 Q G+ + V + + + RD+ L I YD+F T + + +++ ++ DKGDI+ Sbjct: 64 QKQGLPPEALVAKMHKEHARDLGGFL-IEYDNFYTTHSPENRELAELIYTRLKDKGDIFA 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------- 161 S Y E + D + GA QY A ++P + ++ Sbjct: 123 KTISQAYDPVKEIFLPDRFIRGTCPRCGAKDQYGDVCEVCGATYSPTELIDPVSALSGAK 182 Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 E +FF L+ Y L + ++ L + N++ + LK +SR + Sbjct: 183 PIEKNSEHFFFSLNRYTQLLKKWIDAGH---LQPQVANKLKEWFSEDLKPWDISRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILR 269 G +IP YVW+DA Y+ + L P + +W H +GKDI+ Sbjct: 240 GFEIPHAANKYFYVWLDAPIGYMASLKNLSKQRPSVNFDAYWKEGSQTELYHFVGKDIVY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FHA++WPA L SA LP ++ HG++ G+K+SKS G I ++ + + LRY+ Sbjct: 300 FHALFWPAMLSSAGFRLPTAIYVHGYLTVNGQKMSKSRGTFITAHHYLDHLSPEYLRYYY 359 Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ +D + D +RVNADL NL SR I K++ G + + E Sbjct: 360 AAKLSAQVEDIDLNLDDFIQRVNADLIGKYVNLASRCAGFITKNFGGKLANELPEPDLYE 419 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 S L + Q I + ++ +A+ ++SL ++Y DA+KPW L K A Sbjct: 420 SFL----QTEQTITDYYESLNYSKAVRVIMSLADRANQYIDAKKPWALAKEINQEAQVQA 475 Query: 449 YVT--VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT--FD 504 T + + + L L+ +P A K+ L C + LK + H F+ Sbjct: 476 VCTQGLNLFKILTTYLKPILPVTAKKVEQFL------NCDELNFANLKTPLLDHSVNPFE 529 Query: 505 PIFPRFL 511 P+ R L Sbjct: 530 PLMQRLL 536 >gi|324013836|gb|EGB83055.1| methionyl-tRNA synthetase [Escherichia coli MS 60-1] Length = 676 Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 69 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G K+W D H IGKDI+ F Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDKYWKKDSTAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505 >gi|124266353|ref|YP_001020357.1| methionyl-tRNA synthetase [Methylibium petroleiphilum PM1] gi|187647749|sp|A2SEY3|SYM_METPP RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|124259128|gb|ABM94122.1| methionyl-tRNA synthetase [Methylibium petroleiphilum PM1] Length = 697 Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 162/562 (28%), Positives = 251/562 (44%), Gaps = 68/562 (12%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 +L+++TA+ Y N HIGH E I AD+ RF R+ G V F D HG I AA+ A Sbjct: 4 QLFVTTALPYANGHFHIGHIMEYIQADIWVRFQRMQGHAVHFVGADDAHGAPIMIAAEKA 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T + FV + + D I++D++ T +H + ++ + G I+ Sbjct: 64 GKTPQQFVADIAAGRKPYLDGFHIAFDNWHSTDGPENHQLAQDTYRALRRNGLIFTREIE 123 Query: 126 GWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME------- 161 ++ + D E K GA QY ++ NP + Sbjct: 124 QFFDPVKAMFLPDRYIKGECPKCGAKDQYGDSCEVCGAVYAPTELKNPYSTLTGATPVMK 183 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERR----NEVISFVK----------SGLKD 206 E +FF+LS+ + L + + PI + EV++ +K GL D Sbjct: 184 TSEHHFFQLSS--PRCLDFLKDWTHGSAPISGQPRLQAEVLNKIKEWFATDEQGHGGLAD 241 Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LH 261 +SR +GI+IPD P YVW+DA YL + + G + + AD +H Sbjct: 242 WDISRDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNYFDKQGLDFEAFMADPKTEQVH 301 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321 IGKDI FH ++WPA L + P VF HGFI GEK+SKS G I P+ + E+G Sbjct: 302 FIGKDITYFHTLFWPAMLHFSGRRTPDHVFVHGFITVSGEKMSKSRGTGISPLRYL-EIG 360 Query: 322 VDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 ++A LRY++ ++ +D ++ D RVN+DL N+ SR+ + K +DG + Sbjct: 361 MNAEWLRYYIAAKLNGRVEDVDFNPDDFVARVNSDLVGKYINIASRAAGFLSKRFDGRLT 420 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 ++L +I +++ +AL + ++L V+ Y DA KPWEL K Sbjct: 421 A--ELPAESRTLLEGLQAARDDIARLYEDREYAKALREAMALADRVNEYVDANKPWELAK 478 Query: 439 TNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADENRC------ 485 R V +E R L I L+ +P LA ++ L V AD R Sbjct: 479 QAGQDARLQQVCSTCIEAFRLLTIYLKPVLPALAAQVEGFLKVEPMRFADAGRLLGAHAI 538 Query: 486 --FQSLDQRLKPGFMLHKTFDP 505 ++ L QR+ P +L F+P Sbjct: 539 SEYKHLMQRVDPK-LLDALFEP 559 >gi|110642322|ref|YP_670052.1| methionyl-tRNA synthetase [Escherichia coli 536] gi|300981629|ref|ZP_07175615.1| methionyl-tRNA synthetase [Escherichia coli MS 200-1] gi|110343914|gb|ABG70151.1| methionyl-tRNA synthetase [Escherichia coli 536] gi|300307430|gb|EFJ61950.1| methionyl-tRNA synthetase [Escherichia coli MS 200-1] Length = 680 Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 69 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G K+W D H IGKDI+ F Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDKYWKKDSTAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505 >gi|300948209|ref|ZP_07162332.1| methionyl-tRNA synthetase [Escherichia coli MS 116-1] gi|300955139|ref|ZP_07167541.1| methionyl-tRNA synthetase [Escherichia coli MS 175-1] gi|331653541|ref|ZP_08354542.1| methionine--tRNA ligase [Escherichia coli M718] gi|405895|gb|AAA60526.1| methionyl-tRNA synthetase [Escherichia coli] gi|300317934|gb|EFJ67718.1| methionyl-tRNA synthetase [Escherichia coli MS 175-1] gi|300452257|gb|EFK15877.1| methionyl-tRNA synthetase [Escherichia coli MS 116-1] gi|315136745|dbj|BAJ43904.1| methionyl-tRNA synthetase [Escherichia coli DH1] gi|323936728|gb|EGB33013.1| methionyl-tRNA synthetase [Escherichia coli E1520] gi|331048390|gb|EGI20466.1| methionine--tRNA ligase [Escherichia coli M718] gi|744213|prf||2014253G Met-tRNA synthetase Length = 680 Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 69 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505 >gi|16130052|ref|NP_416617.1| methionyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|89108932|ref|AP_002712.1| methionyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110] gi|170081738|ref|YP_001731058.1| methionyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|238901300|ref|YP_002927096.1| methionyl-tRNA synthetase [Escherichia coli BW2952] gi|135149|sp|P00959|SYM_ECOLI RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|226710904|sp|B1X7K4|SYM_ECODH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|259511558|sp|C4ZSJ8|SYM_ECOBW RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|42016|emb|CAA39315.1| methionine-tRNA ligase [Escherichia coli K-12] gi|146829|gb|AAA24161.1| methionyl-tRNA synthetase (metG) [Escherichia coli] gi|1788432|gb|AAC75175.1| methionyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|85675229|dbj|BAE76592.1| methionyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110] gi|169889573|gb|ACB03280.1| methionyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|238861758|gb|ACR63756.1| methionyl-tRNA synthetase [Escherichia coli BW2952] gi|260448789|gb|ACX39211.1| methionyl-tRNA synthetase [Escherichia coli DH1] gi|323940818|gb|EGB37006.1| methionyl-tRNA synthetase [Escherichia coli E482] Length = 677 Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|238895686|ref|YP_002920421.1| methionyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044] gi|288934383|ref|YP_003438442.1| methionyl-tRNA synthetase [Klebsiella variicola At-22] gi|238548003|dbj|BAH64354.1| methionyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288889112|gb|ADC57430.1| methionyl-tRNA synthetase [Klebsiella variicola At-22] Length = 680 Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + DISYD++ T + + +++ ++ + G I Sbjct: 69 LGITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160 S Y ++ + D KG + + A ++P + + Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPV 187 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D + Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGVL----AAELADPA 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E ++ +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYKTFTDAAESIGEAWDSREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P+LA + Sbjct: 481 CTMGLNMFRVLMTWLKPVLPQLAAR 505 >gi|293410473|ref|ZP_06654049.1| methionyl-tRNA synthetase [Escherichia coli B354] gi|291470941|gb|EFF13425.1| methionyl-tRNA synthetase [Escherichia coli B354] Length = 591 Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 69 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKARTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505 >gi|152971099|ref|YP_001336208.1| methionyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|290508587|ref|ZP_06547958.1| methionyl-tRNA synthetase [Klebsiella sp. 1_1_55] gi|187647731|sp|A6TBK7|SYM_KLEP7 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|150955948|gb|ABR77978.1| methionyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|289777981|gb|EFD85978.1| methionyl-tRNA synthetase [Klebsiella sp. 1_1_55] Length = 677 Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + DISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160 S Y ++ + D KG + + A ++P + + Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D + Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGVL----AAELADPA 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E ++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAESIGEAWDSREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P+LA + Sbjct: 478 CTMGLNMFRVLMTWLKPVLPQLAAR 502 >gi|220935785|ref|YP_002514684.1| methionyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7] gi|219997095|gb|ACL73697.1| methionyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7] Length = 680 Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 138/509 (27%), Positives = 224/509 (44%), Gaps = 41/509 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N H+GH E I D+ RF R+ G ++ D HG I A+ Sbjct: 13 QILVTSALPYANGPIHLGHLVEYIQTDIWVRFQRMGGHRCIYVCADDAHGTPIMLKARAE 72 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ + +++ R +++D + T + +++ ++ D G I + Sbjct: 73 GIEPEELIERIGHEHRADFAGFHVAFDQYHSTHSPENQHFAELIYTRLRDGGHIARRTIR 132 Query: 126 GWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWM-------- 160 Y + + D E K GA QY ++ NPV + Sbjct: 133 QAYDPKAGMFLPDRFIKGECPKCGAADQYGDSCEACGATYAPTDLKNPVSAISGATPVEK 192 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E E YFF+L+ ++ L + S L E RN++ + K+GL D +SR WG +I Sbjct: 193 ESEHYFFKLADFEQFLREWTGSGS---LQPEIRNKLNEWFKAGLTDWDISRDAPYWGFEI 249 Query: 221 PDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274 PD P YVW+DA Y+ + Y + +W D H IGKDI FH ++ Sbjct: 250 PDAPGKYFYVWLDAPIGYMASFKRYCEGHGLDFDAWWSPDSQAELYHFIGKDIAYFHTLF 309 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L A P VF HGF+ G+K+SKS G I ++ + + LRY+ ++ Sbjct: 310 WPAMLTGAGFRAPTAVFCHGFLTVNGQKMSKSRGTFIKARTYLDHLNPEYLRYYFAAKLG 369 Query: 335 CGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 G D D RVN+DL + N+ SR I K ++G + A + D + Sbjct: 370 SGVDDIDLSLDDFIARVNSDLVGKVVNIASRCAGFIHKRFNGQL----ADSLPDADLYQR 425 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVT 451 +R EI + + + +A+ ++++L ++Y D KPW L K DR V Sbjct: 426 FARSRDEIAKLFEAREFGQAMREIMALADVANQYIDEHKPWVLAKQEGMEDRVQAVCTQG 485 Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVA 480 + + R L L+ +P +A K L VA Sbjct: 486 LNLFRVLMTYLKPVLPAMAEKAEGFLNVA 514 >gi|301021168|ref|ZP_07185205.1| methionyl-tRNA synthetase [Escherichia coli MS 69-1] gi|300398256|gb|EFJ81794.1| methionyl-tRNA synthetase [Escherichia coli MS 69-1] Length = 680 Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 69 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505 >gi|218690179|ref|YP_002398391.1| methionyl-tRNA synthetase [Escherichia coli ED1a] gi|331658191|ref|ZP_08359153.1| methionine--tRNA ligase [Escherichia coli TA206] gi|254782866|sp|B7MX36|SYM_ECO81 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|218427743|emb|CAR08652.2| methionyl-tRNA synthetase [Escherichia coli ED1a] gi|222033877|emb|CAP76618.1| Methionyl-tRNA synthetase [Escherichia coli LF82] gi|281179206|dbj|BAI55536.1| methionyl-tRNA synthetase [Escherichia coli SE15] gi|312946734|gb|ADR27561.1| methionyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C] gi|315299519|gb|EFU58770.1| methionyl-tRNA synthetase [Escherichia coli MS 16-3] gi|330911946|gb|EGH40456.1| methionyl-tRNA synthetase [Escherichia coli AA86] gi|331056439|gb|EGI28448.1| methionine--tRNA ligase [Escherichia coli TA206] Length = 677 Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|134046374|ref|YP_001097859.1| methionyl-tRNA synthetase [Methanococcus maripaludis C5] gi|187647746|sp|A4FZL1|SYM_METM5 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|132663999|gb|ABO35645.1| methionyl-tRNA synthetase [Methanococcus maripaludis C5] Length = 663 Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 142/500 (28%), Positives = 226/500 (45%), Gaps = 50/500 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K ++TA+AY N H+GHA I AD+ R+ RL G +V+ GTD HG I A+ Sbjct: 2 KHLVTTALAYTNGPLHLGHARSTYIPADIYTRYLRLKGEEVIHVGGTDNHGVPITLTAER 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV VD+ + D L++S+D F RT H +T + + K+ + G IY+ Sbjct: 62 EGVKPIDIVDRYHNAIKADLDSLNVSFDTFGRTHSDIHIETAQEFYSKLKENGYIYEKEI 121 Query: 125 SGWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWM-------------- 160 +Y + + Y D V +G + P + + Sbjct: 122 EQFYCEKCDMYLADRYVEGICPFCEGEARGDHCEVCGRHLEPTELVNPYCIHCNSKPEIK 181 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 YFF+LSA QD L Y E+ PE +P +N + +++ L D +SR WG+ I Sbjct: 182 RTTHYFFKLSAMQDVLKEYIENSPE--MPEHVKNMALRWIEE-LHDWDVSR-NIKWGVPI 237 Query: 221 PDDPQYIMYVWIDALTNYLTTTG---------YLDNPDGSKAKFWPADLHVIGKDILRFH 271 P +MYVWI+A Y++ T +L+N SK H IGKDI H Sbjct: 238 PGCDDQVMYVWIEAPIGYVSFTKQLGDLWKDYWLENTGDSKIS------HFIGKDITVHH 291 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 A++WP L +P V S G++ + +K+S S V+ + IE D LRYF + Sbjct: 292 AVFWPGILKGIGGYKMPNAVVSGGYLTLENKKMSTSKNWVVWVKDFIENFSSDYLRYFFM 351 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDE 388 +D + D +KR+N +L + IGN R++ + + G P + D+ Sbjct: 352 INAPLNRDTDFSWDDFQKRINTELIDIIGNFTHRTLVFTERKF-GSTPVVDLNQLKDEDK 410 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 ++S C L + ++ AL ++I L E + YF PW +K + +R V+ Sbjct: 411 KLISKCEDTLNRVDSLIREYNFKDALMEIIHLAKEGNGYFQGMAPWAIK--DEERLKEVM 468 Query: 449 YVTVEVIRQLAILLQAFVPK 468 Y ++ + LL +F+P+ Sbjct: 469 YTCSVALKYIVYLLSSFMPE 488 >gi|206581116|ref|YP_002237459.1| methionyl-tRNA synthetase [Klebsiella pneumoniae 342] gi|226710907|sp|B5XP89|SYM_KLEP3 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|206570174|gb|ACI11950.1| methionyl-tRNA synthetase [Klebsiella pneumoniae 342] Length = 677 Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 132/504 (26%), Positives = 232/504 (46%), Gaps = 43/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + DISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 S Y + D V G + + A ++P + + Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPVM 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G + Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRFH 271 IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ FH Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSSAELYHFIGKDIVYFH 302 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D ++ Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGVL----AAELADPAL 418 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 + + I E ++ +A+ ++++L +RY D Q PW + K A + Sbjct: 419 YKTFTDAAESIGEAWDSREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P+LA + Sbjct: 479 TMGLNMFRVLMTWLKPVLPQLAAR 502 >gi|157157217|ref|YP_001463462.1| methionyl-tRNA synthetase [Escherichia coli E24377A] gi|170681859|ref|YP_001743009.1| methionyl-tRNA synthetase [Escherichia coli SMS-3-5] gi|191165345|ref|ZP_03027187.1| methionyl tRNA synthetase [Escherichia coli B7A] gi|193062824|ref|ZP_03043917.1| methionyl tRNA synthetase [Escherichia coli E22] gi|193069312|ref|ZP_03050268.1| methionyl tRNA synthetase [Escherichia coli E110019] gi|194428871|ref|ZP_03061405.1| methionyl tRNA synthetase [Escherichia coli B171] gi|209919574|ref|YP_002293658.1| methionyl-tRNA synthetase [Escherichia coli SE11] gi|218554679|ref|YP_002387592.1| methionyl-tRNA synthetase [Escherichia coli IAI1] gi|218695732|ref|YP_002403399.1| methionyl-tRNA synthetase [Escherichia coli 55989] gi|218699295|ref|YP_002406924.1| methionyl-tRNA synthetase [Escherichia coli IAI39] gi|256017717|ref|ZP_05431582.1| methionyl-tRNA synthetase [Shigella sp. D9] gi|260844721|ref|YP_003222499.1| methionyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009] gi|260856089|ref|YP_003229980.1| methionyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368] gi|260868819|ref|YP_003235221.1| methionyl-tRNA synthetase [Escherichia coli O111:H- str. 11128] gi|293446466|ref|ZP_06662888.1| methionyl-tRNA synthetase [Escherichia coli B088] gi|300902240|ref|ZP_07120238.1| methionyl-tRNA synthetase [Escherichia coli MS 84-1] gi|300917049|ref|ZP_07133742.1| methionyl-tRNA synthetase [Escherichia coli MS 115-1] gi|300924516|ref|ZP_07140483.1| methionyl-tRNA synthetase [Escherichia coli MS 182-1] gi|306814769|ref|ZP_07448931.1| methionyl-tRNA synthetase [Escherichia coli NC101] gi|307314906|ref|ZP_07594496.1| methionyl-tRNA synthetase [Escherichia coli W] gi|331668809|ref|ZP_08369657.1| methionine--tRNA ligase [Escherichia coli TA271] gi|187647719|sp|A7ZNT3|SYM_ECO24 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|226695278|sp|B7NPL8|SYM_ECO7I RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|226695279|sp|B7M4V9|SYM_ECO8A RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|226695281|sp|B1LN54|SYM_ECOSM RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|226710905|sp|B6HYV5|SYM_ECOSE RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|254782865|sp|B7L9Y6|SYM_ECO55 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|157079247|gb|ABV18955.1| methionyl-tRNA synthetase [Escherichia coli E24377A] gi|170519577|gb|ACB17755.1| methionyl tRNA synthetase [Escherichia coli SMS-3-5] gi|190904508|gb|EDV64215.1| methionyl tRNA synthetase [Escherichia coli B7A] gi|192931467|gb|EDV84068.1| methionyl tRNA synthetase [Escherichia coli E22] gi|192957445|gb|EDV87892.1| methionyl tRNA synthetase [Escherichia coli E110019] gi|194413039|gb|EDX29327.1| methionyl tRNA synthetase [Escherichia coli B171] gi|209912833|dbj|BAG77907.1| methionyl-tRNA synthase [Escherichia coli SE11] gi|218352464|emb|CAU98240.1| methionyl-tRNA synthetase [Escherichia coli 55989] gi|218361447|emb|CAQ99034.1| methionyl-tRNA synthetase [Escherichia coli IAI1] gi|218369281|emb|CAR17039.1| methionyl-tRNA synthetase [Escherichia coli IAI39] gi|257754738|dbj|BAI26240.1| methionyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368] gi|257759868|dbj|BAI31365.1| methionyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009] gi|257765175|dbj|BAI36670.1| methionyl-tRNA synthetase [Escherichia coli O111:H- str. 11128] gi|291323296|gb|EFE62724.1| methionyl-tRNA synthetase [Escherichia coli B088] gi|300405645|gb|EFJ89183.1| methionyl-tRNA synthetase [Escherichia coli MS 84-1] gi|300415685|gb|EFJ98995.1| methionyl-tRNA synthetase [Escherichia coli MS 115-1] gi|300419282|gb|EFK02593.1| methionyl-tRNA synthetase [Escherichia coli MS 182-1] gi|305852163|gb|EFM52615.1| methionyl-tRNA synthetase [Escherichia coli NC101] gi|306905612|gb|EFN36142.1| methionyl-tRNA synthetase [Escherichia coli W] gi|315061427|gb|ADT75754.1| methionyl-tRNA synthetase [Escherichia coli W] gi|315255375|gb|EFU35343.1| methionyl-tRNA synthetase [Escherichia coli MS 85-1] gi|320199178|gb|EFW73771.1| Methionyl-tRNA synthetase [Escherichia coli EC4100B] gi|323152334|gb|EFZ38623.1| methionyl-tRNA synthetase [Escherichia coli EPECa14] gi|323161833|gb|EFZ47712.1| methionyl-tRNA synthetase [Escherichia coli E128010] gi|323172706|gb|EFZ58340.1| methionyl-tRNA synthetase [Escherichia coli LT-68] gi|323176992|gb|EFZ62582.1| methionyl-tRNA synthetase [Escherichia coli 1180] gi|323183730|gb|EFZ69122.1| methionyl-tRNA synthetase [Escherichia coli 1357] gi|323377994|gb|ADX50262.1| methionyl-tRNA synthetase [Escherichia coli KO11] gi|323944929|gb|EGB40994.1| methionyl-tRNA synthetase [Escherichia coli H120] gi|324015992|gb|EGB85211.1| methionyl-tRNA synthetase [Escherichia coli MS 117-3] gi|324118043|gb|EGC11942.1| methionyl-tRNA synthetase [Escherichia coli E1167] gi|331064003|gb|EGI35914.1| methionine--tRNA ligase [Escherichia coli TA271] Length = 677 Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|319950591|ref|ZP_08024499.1| methionyl-tRNA synthetase [Dietzia cinnamea P4] gi|319435730|gb|EFV90942.1| methionyl-tRNA synthetase [Dietzia cinnamea P4] Length = 617 Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 149/524 (28%), Positives = 235/524 (44%), Gaps = 67/524 (12%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + TA+A+P N HIGH + +DV +R+ R+ G DVL +GTDEHG + A+ Sbjct: 5 VLTAVAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNDVLMVSGTDEHGTPLLVQAEKE 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV + D+ +R D L +SYD F RTT + H+ + L++ + G + + Sbjct: 65 GVPVQELADRYNRVIVDDLAGLGLSYDLFTRTTTRNHYAVVQELFRGLHRNGYMVAKTTT 124 Query: 126 GWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPV--------------QWM 160 G S D D+ +G Q +P +++ Sbjct: 125 GAVSPSTGRTLPDRYIEGTCPICGDDGARGDQCDNCGNQLDPADLKNPRSRINGETPKFI 184 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDWG 217 E E +F L A D L + + ++ R V+ F + L+DL ++SR DWG Sbjct: 185 ETEHWFLDLPALADSLGDWLKGRKDW------RPNVLKFSLNLLEDLRPRAMSRD-IDWG 237 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW----PADLHVIGK 265 I IP D +YVW DA+ YL+ + + + ++W + +GK Sbjct: 238 IPIPVDGWADRGDKKLYVWFDAVVGYLSASIEWAWRTGEPEAWRRWWTDPEAVSHYFMGK 297 Query: 266 DILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FH+ WPA L+ L LP +V S F+ G K S S G VI Sbjct: 298 DNITFHSQIWPAELIGYDGRGAHGGEPGPLGALTLPTEVVSSEFLTMSGSKFSSSRGVVI 357 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 + + E G DALRYF+ +D + D +R NA+L G GNLV+R+VSM K Sbjct: 358 YVRDFLAEFGPDALRYFIAVAGPENQDTDFTWDEYVRRTNAELVGGWGNLVNRTVSMAHK 417 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 ++ G IP PG T+ D +L + +++ + + + +V +RY A Sbjct: 418 NF-GEIPRPGTLTDLDAELLRDAESAFATVGAHLERSRFKAGVTEAMRIVGAANRYIAAT 476 Query: 432 KPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +PW+L K +R TVL+ ++V+ LL ++P A +I Sbjct: 477 EPWKLAKEPEQRERLGTVLHTALQVVSDANTLLTPYLPSAAQQI 520 >gi|218705643|ref|YP_002413162.1| methionyl-tRNA synthetase [Escherichia coli UMN026] gi|293405583|ref|ZP_06649575.1| metG [Escherichia coli FVEC1412] gi|298381264|ref|ZP_06990863.1| methionyl-tRNA synthetase [Escherichia coli FVEC1302] gi|300901272|ref|ZP_07119370.1| methionyl-tRNA synthetase [Escherichia coli MS 198-1] gi|226695280|sp|B7NCE4|SYM_ECOLU RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|218432740|emb|CAR13634.1| methionyl-tRNA synthetase [Escherichia coli UMN026] gi|284922102|emb|CBG35181.1| Methionyl-tRNA synthetase [Escherichia coli 042] gi|291427791|gb|EFF00818.1| metG [Escherichia coli FVEC1412] gi|298278706|gb|EFI20220.1| methionyl-tRNA synthetase [Escherichia coli FVEC1302] gi|300355269|gb|EFJ71139.1| methionyl-tRNA synthetase [Escherichia coli MS 198-1] Length = 677 Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|320195981|gb|EFW70605.1| Methionyl-tRNA synthetase [Escherichia coli WV_060327] gi|324006407|gb|EGB75626.1| methionyl-tRNA synthetase [Escherichia coli MS 57-2] Length = 677 Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|315079929|gb|EFT51905.1| methionyl-tRNA synthetase [Propionibacterium acnes HL078PA1] Length = 601 Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 147/530 (27%), Positives = 242/530 (45%), Gaps = 73/530 (13%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + A+A+P N HIGH + +DV AR+ R+ G VL +G+D HG I+ A Sbjct: 14 VLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 73 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT + ++ R L +SYD + T H D + ++ ++ + G + K Sbjct: 74 GVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLTDNHADVTQEIFTRLHENGYVVKRSEM 133 Query: 126 GWY------SLRDE--------AYYNDDEVYKGADGQYYNAQHNPV-------------- 157 G + +L D Y+D +G Q +P Sbjct: 134 GAFEPSTGRTLPDRYIEGTCPVCGYDD---ARGDQCDNCGRQLDPADLIDPRSKTTGAAP 190 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215 ++ E E +F L A L S+ ++ ++ R V+ F + L++L T D Sbjct: 191 EFRETEHFFLDLPALAGSLASWIDTRTDW------RPNVLKFSHNLLEELRPRAITRDLD 244 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262 WGI++P D+P +YVW DA+ YL+ + + PD + +FW + Sbjct: 245 WGIRVPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYF 303 Query: 263 IGKDILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSL 307 +GKD + FH++ WP LL N L LP ++ S F+ G K+S S Sbjct: 304 MGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSR 363 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 G I + + E G DALRYF+ +D + + +RVN +LAN GNLV+RS+S Sbjct: 364 GATIFVGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSIS 423 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 M K+ IP G T++D +L + + + + A+ + + +V + Y Sbjct: 424 MAFKNCH-EIPAAGELTDADRELLDAAATGFDTVGGLLAHARFKAAITEAMRIVGLANAY 482 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A++PW+LK NP+R TVL+V ++V+ + ++ F+P A KI++ L Sbjct: 483 ISAEEPWKLKD-NPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEAL 531 >gi|30063551|ref|NP_837722.1| methionyl-tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|56480038|ref|NP_708001.2| methionyl-tRNA synthetase [Shigella flexneri 2a str. 301] gi|110806076|ref|YP_689596.1| methionyl-tRNA synthetase [Shigella flexneri 5 str. 8401] gi|71153570|sp|Q83KH0|SYM_SHIFL RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|123048090|sp|Q0T324|SYM_SHIF8 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|30041804|gb|AAP17531.1| methionine tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|56383589|gb|AAN43708.2| methionine tRNA synthetase [Shigella flexneri 2a str. 301] gi|110615624|gb|ABF04291.1| methionine tRNA synthetase [Shigella flexneri 5 str. 8401] gi|281601555|gb|ADA74539.1| Methionyl-tRNA synthetase [Shigella flexneri 2002017] gi|313649839|gb|EFS14259.1| methionyl-tRNA synthetase [Shigella flexneri 2a str. 2457T] Length = 677 Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPE 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|218549528|ref|YP_002383319.1| methionyl-tRNA synthetase [Escherichia fergusonii ATCC 35469] gi|226695282|sp|B7LV75|SYM_ESCF3 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|218357069|emb|CAQ89701.1| methionyl-tRNA synthetase [Escherichia fergusonii ATCC 35469] Length = 677 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|331647762|ref|ZP_08348854.1| methionine--tRNA ligase [Escherichia coli M605] gi|331043486|gb|EGI15624.1| methionine--tRNA ligase [Escherichia coli M605] Length = 680 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 69 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505 >gi|323977697|gb|EGB72783.1| methionyl-tRNA synthetase [Escherichia coli TW10509] Length = 680 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 69 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505 >gi|301305156|ref|ZP_07211255.1| methionyl-tRNA synthetase [Escherichia coli MS 124-1] gi|301329302|ref|ZP_07222270.1| methionyl-tRNA synthetase [Escherichia coli MS 78-1] gi|301644128|ref|ZP_07244138.1| methionyl-tRNA synthetase [Escherichia coli MS 146-1] gi|309792992|ref|ZP_07687420.1| methionyl-tRNA synthetase [Escherichia coli MS 145-7] gi|331678063|ref|ZP_08378738.1| methionine--tRNA ligase [Escherichia coli H591] gi|331683792|ref|ZP_08384388.1| methionine--tRNA ligase [Escherichia coli H299] gi|300839560|gb|EFK67320.1| methionyl-tRNA synthetase [Escherichia coli MS 124-1] gi|300844392|gb|EFK72152.1| methionyl-tRNA synthetase [Escherichia coli MS 78-1] gi|301077528|gb|EFK92334.1| methionyl-tRNA synthetase [Escherichia coli MS 146-1] gi|308123278|gb|EFO60540.1| methionyl-tRNA synthetase [Escherichia coli MS 145-7] gi|331074523|gb|EGI45843.1| methionine--tRNA ligase [Escherichia coli H591] gi|331078744|gb|EGI49946.1| methionine--tRNA ligase [Escherichia coli H299] gi|332101085|gb|EGJ04431.1| methionyl-tRNA synthetase [Shigella sp. D9] Length = 680 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 69 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505 >gi|300818887|ref|ZP_07099092.1| methionyl-tRNA synthetase [Escherichia coli MS 107-1] gi|300528506|gb|EFK49568.1| methionyl-tRNA synthetase [Escherichia coli MS 107-1] Length = 677 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|320173698|gb|EFW48886.1| Methionyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112] Length = 677 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTHSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYRTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|312973641|ref|ZP_07787813.1| methionyl-tRNA synthetase [Escherichia coli 1827-70] gi|310332236|gb|EFP99471.1| methionyl-tRNA synthetase [Escherichia coli 1827-70] Length = 677 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPE 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|300936576|ref|ZP_07151483.1| methionyl-tRNA synthetase [Escherichia coli MS 21-1] gi|300458296|gb|EFK21789.1| methionyl-tRNA synthetase [Escherichia coli MS 21-1] Length = 658 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 69 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505 >gi|320178044|gb|EFW53025.1| Methionyl-tRNA synthetase [Shigella boydii ATCC 9905] Length = 677 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPE 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|194431555|ref|ZP_03063847.1| methionyl tRNA synthetase [Shigella dysenteriae 1012] gi|194420380|gb|EDX36457.1| methionyl tRNA synthetase [Shigella dysenteriae 1012] gi|332091488|gb|EGI96572.1| methionyl-tRNA synthetase [Shigella dysenteriae 155-74] Length = 677 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPE 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|187732521|ref|YP_001879553.1| methionyl-tRNA synthetase [Shigella boydii CDC 3083-94] gi|226710924|sp|B2TVX7|SYM_SHIB3 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|187429513|gb|ACD08787.1| methionyl tRNA synthetase [Shigella boydii CDC 3083-94] Length = 677 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYRTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|307138768|ref|ZP_07498124.1| methionyl-tRNA synthetase [Escherichia coli H736] gi|315618108|gb|EFU98699.1| methionyl-tRNA synthetase [Escherichia coli 3431] Length = 677 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYRTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINMFRVLMTYLKPVLPKLTER 502 >gi|331673641|ref|ZP_08374404.1| methionine--tRNA ligase [Escherichia coli TA280] gi|331068914|gb|EGI40306.1| methionine--tRNA ligase [Escherichia coli TA280] Length = 680 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 69 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEDRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505 >gi|300821783|ref|ZP_07101928.1| methionyl-tRNA synthetase [Escherichia coli MS 119-7] gi|300525625|gb|EFK46694.1| methionyl-tRNA synthetase [Escherichia coli MS 119-7] Length = 677 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLTSELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|15802593|ref|NP_288620.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 EDL933] gi|15832174|ref|NP_310947.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|168750112|ref|ZP_02775134.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4113] gi|168756378|ref|ZP_02781385.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4401] gi|168761860|ref|ZP_02786867.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4501] gi|168770093|ref|ZP_02795100.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4486] gi|168775929|ref|ZP_02800936.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4196] gi|168783890|ref|ZP_02808897.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4076] gi|168789082|ref|ZP_02814089.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC869] gi|195937886|ref|ZP_03083268.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024] gi|208806897|ref|ZP_03249234.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4206] gi|208814010|ref|ZP_03255339.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4045] gi|208820874|ref|ZP_03261194.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4042] gi|209397521|ref|YP_002271396.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4115] gi|217329495|ref|ZP_03445574.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. TW14588] gi|254793941|ref|YP_003078778.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359] gi|261224994|ref|ZP_05939275.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000] gi|261257658|ref|ZP_05950191.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966] gi|291283362|ref|YP_003500180.1| Methionyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|25009369|sp|Q8X7E7|SYM_ECO57 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|226710903|sp|B5YV64|SYM_ECO5E RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|12516327|gb|AAG57175.1|AE005437_10 methionine tRNA synthetase [Escherichia coli O157:H7 str. EDL933] gi|13362389|dbj|BAB36343.1| methionine tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|187768610|gb|EDU32454.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4196] gi|188015612|gb|EDU53734.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4113] gi|188998822|gb|EDU67808.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4076] gi|189356515|gb|EDU74934.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4401] gi|189360933|gb|EDU79352.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4486] gi|189367747|gb|EDU86163.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4501] gi|189371227|gb|EDU89643.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC869] gi|208726698|gb|EDZ76299.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4206] gi|208735287|gb|EDZ83974.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4045] gi|208740997|gb|EDZ88679.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4042] gi|209158921|gb|ACI36354.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4115] gi|209747798|gb|ACI72206.1| methionine tRNA synthetase [Escherichia coli] gi|209747800|gb|ACI72207.1| methionine tRNA synthetase [Escherichia coli] gi|209747802|gb|ACI72208.1| methionine tRNA synthetase [Escherichia coli] gi|217317263|gb|EEC25692.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. TW14588] gi|226237469|dbj|BAH46991.1| methionyl-tRNA synthetase [Escherichia coli O55:H7] gi|254593341|gb|ACT72702.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359] gi|290763235|gb|ADD57196.1| Methionyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|320191722|gb|EFW66370.1| Methionyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212] gi|320641295|gb|EFX10768.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101] gi|320646659|gb|EFX15563.1| methionyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89] gi|320651946|gb|EFX20314.1| methionyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687] gi|320657546|gb|EFX25344.1| methionyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663153|gb|EFX30462.1| methionyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905] gi|320668028|gb|EFX34924.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61] gi|326338468|gb|EGD62296.1| Methionyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044] gi|326347009|gb|EGD70742.1| Methionyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125] Length = 677 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|124003887|ref|ZP_01688735.1| methionyl-tRNA synthetase [Microscilla marina ATCC 23134] gi|123990942|gb|EAY30409.1| methionyl-tRNA synthetase [Microscilla marina ATCC 23134] Length = 707 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 148/523 (28%), Positives = 252/523 (48%), Gaps = 48/523 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ I+ A+ Y N HIGH A I AD+ AR+ RL G DV+F +G+DEHG + Sbjct: 4 KKHKRHIITAALPYANGAAHIGHLAGVYIPADIYARYLRLKGEDVMFVSGSDEHGVPVTI 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GVT + VD+ + RD ++D + RT+ + HH+T + + K+ +G + Sbjct: 64 RAEKEGVTVQQVVDKYDQVIRDSFKEFGFTFDVYSRTSRQIHHETSQEFFLKLHAEGKLQ 123 Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHN-------------------- 155 K ++ + + D + G D Y + N Sbjct: 124 KKVSQQFFDPTAQRFLADRLIIGTCPKCGNDNAYGDQCENCGSTLSPDELIDPRSTLSNA 183 Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 ++ E E ++ L Y+D L + + + S++ SGL +++R D Sbjct: 184 ALEKKETEHWYIPLDQYEDWLKDWILDSHKDDWKTNVYGQCKSWLDSGLHPRAVTRD-LD 242 Query: 216 WGIKIP--DDPQYIMYVWIDALTNYLTTTG-YLDN--PDGSK----AKFWPAD----LHV 262 WGI++P + +MYVW DA Y++ T Y PDGS K+W ++ +H Sbjct: 243 WGIQVPLPNSEGKVMYVWFDAPIGYISATKEYFKEKAPDGSLDEEWKKYWQSEDSKLVHF 302 Query: 263 IGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV- 320 IGKD + FH I +P+ L + LP+ V ++ F+ + EKIS S + E + E Sbjct: 303 IGKDNIVFHCIMFPSMLKAHGEYVLPENVPANEFMNLEDEKISTSRNWAVWLHEYLREFE 362 Query: 321 -GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 D LRY L + D + +G +KR N +LA+ +GN V R V++ K Y G++P Sbjct: 363 GKQDVLRYALTADAPETSDSNFTWEGFQKRNNNELADNLGNFVRRPVALTHKYYGGVVPP 422 Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW---- 434 TE D++++ + ++I + ++ ALAQV+ L ++Y PW Sbjct: 423 LNDNLTEDDQALIDALAAYPKKIGKAIEEYKFREALAQVMDLSRMGNQYLQKTSPWLLYK 482 Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 E K+ + R T+L+++++V LA+L + F+P A K+ ++L Sbjct: 483 EDKEKHAQRIETILHLSLQVAANLALLCEPFLPFTAEKLRNML 525 >gi|331642730|ref|ZP_08343865.1| methionine--tRNA ligase [Escherichia coli H736] gi|331039528|gb|EGI11748.1| methionine--tRNA ligase [Escherichia coli H736] Length = 680 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 69 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYRTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 481 CSMGINMFRVLMTYLKPVLPKLTER 505 >gi|327332352|gb|EGE74088.1| methionine--tRNA ligase [Propionibacterium acnes HL097PA1] Length = 601 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 147/530 (27%), Positives = 243/530 (45%), Gaps = 73/530 (13%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + A+A+P N HIGH + +DV AR+ R+ G VL +G+D HG I+ A Sbjct: 14 VLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 73 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT + ++ R L +SYD + T H D + ++ ++ + G + K Sbjct: 74 GVTAQECAEKYHRIIAADLQGLGLSYDLYTSTLTDNHADVTQEIFTRLHENGYVVKRSEM 133 Query: 126 GWY------SLRDE--------AYYNDDEVYKGADGQYYNAQHNPV-------------- 157 G + +L D Y+D +G Q +P Sbjct: 134 GAFEPSTGRTLPDRYIEGTCPVCGYDD---ARGDQCDNCGRQLDPADLIDPRSKTTGAAP 190 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215 ++ E E +F L A + L S+ ++ ++ R V+ F + L++L T D Sbjct: 191 EFRETEHFFLDLPALAESLASWIDTRTDW------RPNVLKFSHNLLEELRPRAITRDLD 244 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262 WGI++P D+P +YVW DA+ YL+ + + PD + +FW + Sbjct: 245 WGIRVPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYF 303 Query: 263 IGKDILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSL 307 +GKD + FH++ WP LL N L LP ++ S F+ G K+S S Sbjct: 304 MGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSR 363 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 G I + + E G DALRYF+ +D + + +RVN +LAN GNLV+RS+S Sbjct: 364 GATIFVGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSIS 423 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 M K+ IP G T++D +L + + + + A+ + + +V + Y Sbjct: 424 MAFKNCH-EIPAVGELTDADRELLDAAAAGFDTVGGLLAHARFKAAITEAMRIVGLANAY 482 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A++PW+LK NP+R TVL+V ++V+ + ++ F+P A KI++ L Sbjct: 483 ISAEEPWKLKD-NPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEAL 531 >gi|327253241|gb|EGE64895.1| methionyl-tRNA synthetase [Escherichia coli STEC_7v] Length = 677 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|194436183|ref|ZP_03068285.1| methionyl tRNA synthetase [Escherichia coli 101-1] gi|253772958|ref|YP_003035789.1| methionyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162129|ref|YP_003045237.1| methionyl-tRNA synthetase [Escherichia coli B str. REL606] gi|300930934|ref|ZP_07146296.1| methionyl-tRNA synthetase [Escherichia coli MS 187-1] gi|194424911|gb|EDX40896.1| methionyl tRNA synthetase [Escherichia coli 101-1] gi|242377757|emb|CAQ32519.1| methionyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|253324002|gb|ACT28604.1| methionyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974030|gb|ACT39701.1| methionyl-tRNA synthetase [Escherichia coli B str. REL606] gi|253978198|gb|ACT43868.1| methionyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|300461223|gb|EFK24716.1| methionyl-tRNA synthetase [Escherichia coli MS 187-1] gi|323961710|gb|EGB57314.1| methionyl-tRNA synthetase [Escherichia coli H489] Length = 677 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ANELADPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|323968243|gb|EGB63652.1| methionyl-tRNA synthetase [Escherichia coli M863] Length = 680 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 69 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505 >gi|108762836|ref|YP_631021.1| methionyl-tRNA synthetase [Myxococcus xanthus DK 1622] gi|123374596|sp|Q1D8K2|SYM_MYXXD RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|108466716|gb|ABF91901.1| methionyl-tRNA synthetase [Myxococcus xanthus DK 1622] Length = 703 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 152/549 (27%), Positives = 253/549 (46%), Gaps = 54/549 (9%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E+ +++A+ Y N HIGHA E + D+ RF R G DV++ D HG I A Sbjct: 3 ERTLVTSALPYANGPLHIGHAVEYVQTDIYVRFLRSCGRDVVYFCADDTHGTPIELNAAK 62 Query: 65 AGVTTKVFV----DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 G+ + F+ +++ R+F D LD+ +D F T + +++ ++ +KGDI Sbjct: 63 QGLKPEEFIARFHEEHQRDFHD----LDVRFDYFHSTNSPENRQYAELIYGRLKEKGDIE 118 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME------- 161 + Y D + D KG A QY +A ++P ++ Sbjct: 119 RRNIEQTYCENDRRFL-PDRFIKGTCPNCKASDQYGDACEKCGKAYDPTDLIDARCALCG 177 Query: 162 -------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E FF+LS ++D L P FI P ++ F + GL D +SR Sbjct: 178 TPPVRKHSEHLFFKLSRHED-FLQDVLRKPGFIHP-GLATQLQGFFEKGLSDWDISRDGP 235 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFWPAD-----LHVIGKD 266 +G IP + YVW+DA Y+ TT G S +W AD +H IGKD Sbjct: 236 YFGFAIPGETDKYFYVWLDAPIGYIATTEKWAKETGKAKSALDYWSADADTRIIHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A +P ++ HG ++ GEK+SK+ G ++ + ++++ LR Sbjct: 296 IVYFHALFWPAVLNVAGFHIPSEIKVHGHLMLNGEKMSKTRGTMVPVRDYLDQLDPSYLR 355 Query: 327 YFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 YF + G +D + ++RVN +L N +GNL +R++S++ + + A Sbjct: 356 YFYAANLGPGVEDLDLNLKDFRQRVNGELVNNVGNLANRALSLLAGPLEKRLAPGRAEGP 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYFDAQKPWELKKTNPDRA 444 E + + +RV E+R+ ++L +R+ +VI+ + S + + PW K + + A Sbjct: 416 GRELVEAALARV-PEVRDAF-DKLEYRSAIRVITEIASAANGFLQTAAPWAQVKKDAEVA 473 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--- 501 L +V L LL P+L+ K+F L E FQ+L+ P + Sbjct: 474 RADLSDAADVAYLLGALLAPVTPRLSEKLFAQL--GAEPLTFQALEGAKYPLLDRSRPIG 531 Query: 502 TFDPIFPRF 510 T +P+ PR Sbjct: 532 TPEPLLPRL 540 >gi|157161597|ref|YP_001458915.1| methionyl-tRNA synthetase [Escherichia coli HS] gi|170019566|ref|YP_001724520.1| methionyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|188496162|ref|ZP_03003432.1| methionyl tRNA synthetase [Escherichia coli 53638] gi|256022200|ref|ZP_05436065.1| methionyl-tRNA synthetase [Escherichia sp. 4_1_40B] gi|187647720|sp|A8A1X8|SYM_ECOHS RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|189083260|sp|B1IYW7|SYM_ECOLC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|157067277|gb|ABV06532.1| methionyl tRNA synthetase [Escherichia coli HS] gi|169754494|gb|ACA77193.1| methionyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|188491361|gb|EDU66464.1| methionyl tRNA synthetase [Escherichia coli 53638] gi|309702432|emb|CBJ01756.1| Methionyl-tRNA synthetase [Escherichia coli ETEC H10407] Length = 677 Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ANELADPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|293415399|ref|ZP_06658042.1| methionyl-tRNA synthetase [Escherichia coli B185] gi|291433047|gb|EFF06026.1| methionyl-tRNA synthetase [Escherichia coli B185] Length = 677 Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|126179956|ref|YP_001047921.1| methionyl-tRNA synthetase [Methanoculleus marisnigri JR1] gi|187647748|sp|A3CX39|SYM_METMJ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|125862750|gb|ABN57939.1| methionyl-tRNA synthetase [Methanoculleus marisnigri JR1] Length = 664 Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 137/508 (26%), Positives = 233/508 (45%), Gaps = 41/508 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 L ++ + Y N HIGH + AD R+ R G +V+F G+D HG I +A+ G Sbjct: 6 LLVTCGLPYTNGPCHIGHLRTYVPADFYVRYMRRSGEEVVFVCGSDNHGTPIVISAEQEG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T +V ++ +F + +D+ +D F T + +H+T R + +++ + G +Y S Sbjct: 66 STPRVLSERYHEHFYETFRRMDVVFDRFGMTDDAMNHETTRSIVERLIENGYVYAETVSQ 125 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQH---------------NPVQWME 161 Y E + D V +G + QH ++ E Sbjct: 126 SYCPDCERFLPDRYVEGICPHCGAVARGDECDQGCGQHLEPGEIKDAICKVCGGKAEYRE 185 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 +E YFFRLSA+++ LL Y P RN + +VK L D ++R T DWG+K P Sbjct: 186 QEHYFFRLSAFREFLLDYL---PALGGTSTARNYALGWVKELLHDWCITR-TLDWGVKFP 241 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRFHAIYWP 276 ++YVW+DA Y++ T G+ K +W D H IG DI+ H I+WP Sbjct: 242 GRDDLVVYVWVDAPIGYISFTKEWAQKAGADWKDYWCGDETGVTHFIGGDIIYHHCIFWP 301 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIA 334 A L A LP V + G + +G+K SKS G V+ + + G+ D LRY+L+ Sbjct: 302 ALLKGAGYGLPSAVVASGMVTIEGKKFSKSRGYVVWTNDDYLDQGLPADYLRYYLLSYTN 361 Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 K+ + +RVN ++ +GN + R++ K++ G +P E E I Sbjct: 362 HTKELDFSWKVYGERVNNEIVGTLGNFIYRTMYFAEKEFSG-VPDLAPRLEVIEEI---- 416 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 R L + M++ A+ +++L S + Y PW+L K + A V+ +++ Sbjct: 417 ERSLAAVDGLMRDYDFKNAVDAMMTLASFGNGYIQNNAPWKLIKEDRAAAEQVIADCLQI 476 Query: 455 IRQLAILLQAFVPKLANKIFDILFVADE 482 ++ L ++ + +P + + +L D+ Sbjct: 477 VKALVLVFEPLMPDAMQRAWTMLGYGDD 504 >gi|150403248|ref|YP_001330542.1| methionyl-tRNA synthetase [Methanococcus maripaludis C7] gi|187647747|sp|A6VIW5|SYM_METM7 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|150034278|gb|ABR66391.1| methionyl-tRNA synthetase [Methanococcus maripaludis C7] Length = 663 Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 141/499 (28%), Positives = 225/499 (45%), Gaps = 48/499 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K ++TA+AY N H+GHA I AD+ R+ RL G +V+ GTD HG I A+ Sbjct: 2 KHLVTTALAYTNGPLHLGHARSTYIPADIYTRYLRLKGEEVVHVGGTDNHGVPITLTAER 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV VD+ + D L++S+D F RT H +T + + K+ + G IY+ Sbjct: 62 EGVKPIDIVDRYHNAIKADLDSLNVSFDTFGRTHSDIHIETAQEFYSKLKENGYIYEKEI 121 Query: 125 SGWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME------------- 161 +Y + + Y D V +G + P + + Sbjct: 122 EQFYCEKCDMYLADRYVEGICPFCEGEARGDHCEVCGRHLEPTELVNPYCIHCNSKPEIK 181 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 YFF+LSA QD L Y E+ PE +P +N + +++ L D +SR WG+ I Sbjct: 182 RTTHYFFKLSAMQDVLKEYIENSPE--MPEHVKNMALRWIEE-LHDWDVSR-NIKWGVPI 237 Query: 221 PDDPQYIMYVWIDALTNYLTTTG---------YLDNPDGSKAKFWPADLHVIGKDILRFH 271 P +MYVWI+A Y++ T +L+N SK H IGKDI H Sbjct: 238 PGCDDQVMYVWIEAPIGYVSFTKQLGGIWEDYWLENTGDSKIS------HFIGKDITVHH 291 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 A++WP L +P V S G++ + +K+S S V+ + IE D LRYF + Sbjct: 292 AVFWPGILKGIGGYKMPNAVVSGGYLTLENKKMSTSKNWVVWVKDFIENFSSDYLRYFFM 351 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDES 389 +D + D +KR+N +L + IGN R++ + + I + D+ Sbjct: 352 INAPLNRDTDFSWDDFQKRINTELIDIIGNFTHRTLVFTERKFGSTPIVDSNQLIDEDKK 411 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 ++S C L + ++ AL ++I L E + YF PW +K + +R V+Y Sbjct: 412 LISKCESTLNRVDSLIREYNFKDALMEIILLAKEGNAYFQGMAPWAIK--DDERLKEVMY 469 Query: 450 VTVEVIRQLAILLQAFVPK 468 ++ + LL +F+P+ Sbjct: 470 TCSVALKYIIYLLSSFMPE 488 >gi|323972901|gb|EGB68099.1| methionyl-tRNA synthetase [Escherichia coli TA007] Length = 680 Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 69 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ANELADPQ 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505 >gi|325497930|gb|EGC95789.1| methionyl-tRNA synthetase [Escherichia fergusonii ECD227] Length = 677 Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|326318528|ref|YP_004236200.1| methionyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375364|gb|ADX47633.1| methionyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 697 Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 146/519 (28%), Positives = 233/519 (44%), Gaps = 49/519 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K++++TA+ Y N HIGH E I AD+ RF R+ G +V F D HG I AA+ A Sbjct: 5 KIFVTTALPYANGNFHIGHIMEYIQADIWVRFQRMQGAEVNFVGADDTHGAPIMIAAEKA 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T + FV + + + I +D++ T +H+ R +++ + G I Sbjct: 65 GKTPQQFVADIAAGRKPYLEGFHIRFDNWHSTDAPENHELARQIYRDLQAAGLIETRTIE 124 Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWME------------- 161 ++ + D + G + + A + P +E Sbjct: 125 QFFDPEKNMFLPDRFIKGECPRCHARDQYGDNCENCGAVYAPTDLIEPYSALSGAKPVLK 184 Query: 162 -EEGYFFRLS-----AYQDKLLSYYESHPEFILPIER----RNEVISFVKSGLKDLSLSR 211 + +FF+LS A+ + PE ++ R GL D +SR Sbjct: 185 SSDHFFFQLSDPRCVAFLQEWTQDGRLQPEVANKVKEWFSVRTNPDGTTSEGLGDWDISR 244 Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKD 266 +GI+IPD P YVW+DA YL + L G + AD H IGKD Sbjct: 245 DAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLEKRGQSYDDYVADPQLEQYHFIGKD 304 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDA- 324 I+ FH ++WPA L + P VF HGF+ ++ GEK+SKS G +DP++ + +G++A Sbjct: 305 IVTFHTLFWPAMLKFSGRKTPDAVFVHGFLTVNNGEKMSKSRGTGLDPLKYL-GLGMNAE 363 Query: 325 -LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+L ++ +D ++ + RVN+DL N+ SR+ + K + G + TP A Sbjct: 364 WLRYYLAAKLNGRNEDIDFNAEDFMARVNSDLIGKFVNIASRAAGFLTKRFGGRLGTPDA 423 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 ++L I E + + RA+ + + L V+ Y DA+KPWEL K Sbjct: 424 ---DGAALLEALRAQAGAIAEAYERRDTARAVRETMLLADRVNEYVDARKPWELAKQEGQ 480 Query: 443 RASTVLYVT--VEVIRQLAILLQAFVPKLANKIFDILFV 479 A+ T +E R L + L+ +P LA ++ L V Sbjct: 481 EAALQAACTTCIEAFRLLTLYLKPVLPALAAQVEAFLNV 519 >gi|261402933|ref|YP_003247157.1| methionyl-tRNA synthetase [Methanocaldococcus vulcanius M7] gi|261369926|gb|ACX72675.1| methionyl-tRNA synthetase [Methanocaldococcus vulcanius M7] Length = 655 Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 134/500 (26%), Positives = 246/500 (49%), Gaps = 41/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I+TA+AY N H+GHA I AD++ ++ +L G DV+ GTD HG I A+ G Sbjct: 5 ITTALAYTNGPLHLGHARSTYIPADIMYKYLKLRGEDVIHVGGTDNHGVPITLTAEKEGK 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + V++ ++ D+L++ +D F +T + H +T + + K+ + G IY+ + Sbjct: 65 SPEEIVEKYHNEIKEDLDLLNVEFDAFGKTHSQIHIETAQEFYLKLKENGYIYEKEIEQF 124 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQ-----------HNPV--------QWMEEE 163 Y + + + D V Y G + + + + NP + + + Sbjct: 125 YCPKCKKFLPDRYVEGICPYCGGEARGDHCEVCGRHLEPFELKNPYCVICKGTPEIRKTK 184 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 YFF+LSA +++L Y ++ E +P +N ++++K L D +SR WG+ IP Sbjct: 185 HYFFKLSALKNELEEYIKNAEE--MPEHVKNMALNWIKE-LHDWDISR-DISWGVPIPGT 240 Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFL 279 Q +MYVW++A Y++ + L + K+W H IGKDI HA++WP L Sbjct: 241 NQ-VMYVWLEAPIGYISFSKMLGD---IWKKYWLEKGTKIYHFIGKDITVHHAVFWPGML 296 Query: 280 LS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 ++ LP V S G++ +G K+S S V+ + ++ D LRY+L+ KD Sbjct: 297 IAHKGFNLPAAVVSGGYLTLEGRKMSTSKKWVVWVKDFVKNFDADYLRYYLIMSAPLFKD 356 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRV 397 + D K ++N +L N IGN R ++ + + + I E D+++L C Sbjct: 357 CDFSFDDFKNKINNELINIIGNFTHRVLTFTHRKFKKVPIVDENRLKEEDKALLKKCEET 416 Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 ++ + +N+++ AL ++ L + + YF +PW +K + +R +LY + ++ Sbjct: 417 IKAVDKNIRSFKFRDALVNILHLAIDGNAYFQKMEPWAVK--DEERLKEILYTCCKTVKT 474 Query: 458 LAILLQAFVPKLANKIFDIL 477 L LL ++PK A + +++ Sbjct: 475 LIYLLYPYMPKKALALLELM 494 >gi|332036949|gb|EGI73408.1| methionyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505] Length = 673 Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 139/509 (27%), Positives = 234/509 (45%), Gaps = 51/509 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ I++A+ Y N H+GH E I D+ +RF +L G + + D HG I AQ Sbjct: 3 QRKILITSALPYANGPTHLGHLLEYIQTDIWSRFQKLQGHEAYYVCADDAHGTPIMLNAQ 62 Query: 64 NAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+T + V Q S RD AD +I +D++ T + + + +++ +++D G I K Sbjct: 63 KQGITPEEAVKQVSIERQRDFAD-FNIKFDNYHSTHSQENKELSELIYNRLNDAGHIKKH 121 Query: 123 CYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM----------- 160 S + + D E G A ++P + Sbjct: 122 TISQLFDPEKGIFLPDRFVTGTCPTCKSENQNGDSCDSCGATYSPTDLINPRSVMSGAEP 181 Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + E YFF L A++ L + S + E N++ + GL+ +SR +G Sbjct: 182 VLKDSEHYFFDLPAFEGMLKEWLHSG---TIQQEMANKLDEWFTDGLQQWDISRDAPYFG 238 Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFH 271 +IP+ P YVW+DA Y+ + L + G FW A+L H IGKDI+ FH Sbjct: 239 FEIPNAPGKYFYVWLDAPIGYMASFKNLCDKTGIDFDAFWAEGSDAELYHFIGKDIIYFH 298 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L AN P VF+HGF+ GEK+SKS G I ++ + + LRY+ Sbjct: 299 SLFWPAMLEGANFRKPTNVFAHGFVTVNGEKMSKSKGTFIKARTYLDNLNPEYLRYYYAA 358 Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG----MIPTPGAFTES 386 +++ G D + + +RVN+DL + N+ SR I K +DG +I P E Sbjct: 359 KLSSGIVDLDLNLEDFAQRVNSDLVGKVVNIASRCAGFITKKFDGKLSNIIMQPELLAEF 418 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444 + S+ + + +N+ RA+ ++++L + +++ D PW L K T A Sbjct: 419 QAAAPSITT--------HYENRDYSRAIREIMALADKANQFIDGAAPWVLIKDETKQQEA 470 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKI 473 V + + + R L L+ +P +A+ + Sbjct: 471 HEVCSLGLNLFRVLITYLKPVLPGMADNV 499 >gi|307701515|ref|ZP_07638533.1| methionine--tRNA ligase [Mobiluncus mulieris FB024-16] gi|307613307|gb|EFN92558.1| methionine--tRNA ligase [Mobiluncus mulieris FB024-16] Length = 604 Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 156/524 (29%), Positives = 243/524 (46%), Gaps = 58/524 (11%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +I +A+A+P N HIGH I +DV +R+ R+ G +VL +GTDEHG I A+ Sbjct: 3 HILSAVAWPYANGPRHIGHVAGFGIPSDVFSRYMRMKGHEVLMVSGTDEHGTPILVEAEK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + D+N+R + L +SYD F RTT H+ T R +++ + D G + Sbjct: 63 EGLTPRQLADKNNRLIVEDLVQLGLSYDLFTRTTTGNHYQTVRAMFEVVRDNGYMLVQTT 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159 S D + +GA G +A N + ++ Sbjct: 123 RAAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDACGNQLDPTDLVKPRSKINGETPKF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 +E E YF L A + L + + E R VI F K+ LK++ T DWG Sbjct: 183 VETEHYFLDLPALAEALTKWLD---EREATGTWRPNVIKFSKNFLKEIKPRAMTRDIDWG 239 Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW--PADL--HVIGKDIL 268 I IP +D +YVW DA+ YL+ + G K+W P L + +GKD + Sbjct: 240 IPIPGWEDQPKRLYVWFDAVVGYLSASIEWARRSGDPEAWRKWWNSPEALSYYFMGKDNI 299 Query: 269 RFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 FH+ WPA LL N L LP +V S F+ +G+K + S G VI Sbjct: 300 VFHSQIWPAELLGYNGEGSRGGDPGNLGHLNLPTEVVSSEFLTMEGKKFATSKGIVIYVR 359 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374 +++E VDALRYF+ +D + +R N +L GNLV+R+ +MI K + Sbjct: 360 DMLERYQVDALRYFISAAGPENQDADFTWAEFVRRTNGELVAAWGNLVNRTAAMISKRF- 418 Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 G IP G D+ +L + + + ++ AL +V+ LV E +RY +P+ Sbjct: 419 GEIPPAGKLEGIDQELLDMVATGFDTVGGLIEAHHQKAALGEVMRLVGEANRYVAQTEPF 478 Query: 435 ELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +LK ++ +R T+L+V +V+ L ++ F+P N I +L Sbjct: 479 KLKDESQRNRLGTILHVLAQVVTDLNCMMSPFLPTSCNTIDRVL 522 >gi|227876335|ref|ZP_03994448.1| methionine--tRNA ligase [Mobiluncus mulieris ATCC 35243] gi|269976089|ref|ZP_06183088.1| methionyl-tRNA synthetase [Mobiluncus mulieris 28-1] gi|227843108|gb|EEJ53304.1| methionine--tRNA ligase [Mobiluncus mulieris ATCC 35243] gi|269935682|gb|EEZ92217.1| methionyl-tRNA synthetase [Mobiluncus mulieris 28-1] Length = 604 Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 156/524 (29%), Positives = 243/524 (46%), Gaps = 58/524 (11%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +I +A+A+P N HIGH I +DV +R+ R+ G +VL +GTDEHG I A+ Sbjct: 3 HILSAVAWPYANGPRHIGHVAGFGIPSDVFSRYMRMKGHEVLMVSGTDEHGTPILVEAEK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + D+N+R + L +SYD F RTT H+ T R +++ + D G + Sbjct: 63 EGLTPRQLADKNNRLIVEDLVQLGLSYDLFTRTTTGNHYQTVRAMFEVVRDNGYMLVQTT 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159 S D + +GA G +A N + ++ Sbjct: 123 RAAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDACGNQLDPTDLVKPRSKINGETPKF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 +E E YF L A + L + + E R VI F K+ LK++ T DWG Sbjct: 183 VETEHYFLDLPALAEALTKWLD---EREATGTWRPNVIKFSKNFLKEIKPRAMTRDIDWG 239 Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW--PADL--HVIGKDIL 268 I IP +D +YVW DA+ YL+ + G K+W P L + +GKD + Sbjct: 240 IPIPGWEDQPKRLYVWFDAVVGYLSASIEWARRSGDPEAWRKWWNSPEALSYYFMGKDNI 299 Query: 269 RFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 FH+ WPA LL N L LP +V S F+ +G+K + S G VI Sbjct: 300 VFHSQIWPAELLGYNGEGSRGGDPGNLGHLNLPTEVVSSEFLTMEGKKFATSKGIVIYVR 359 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374 +++E VDALRYF+ +D + +R N +L GNLV+R+ +MI K + Sbjct: 360 DMLERYQVDALRYFISAAGPENQDADFTWAEFVRRTNGELVAAWGNLVNRTAAMISKRF- 418 Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 G IP G D+ +L + + + ++ AL +V+ LV E +RY +P+ Sbjct: 419 GEIPPAGKLEGIDQELLDMVATGFDTVGGLIEAHHQKAALGEVMRLVGEANRYVAQTEPF 478 Query: 435 ELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +LK ++ +R T+L+V +V+ L ++ F+P N I +L Sbjct: 479 KLKDESQRNRLGTILHVLAQVVTDLNCMMSPFLPTSCNTIDRVL 522 >gi|85712085|ref|ZP_01043138.1| Methionyl-tRNA synthetase [Idiomarina baltica OS145] gi|85694075|gb|EAQ32020.1| Methionyl-tRNA synthetase [Idiomarina baltica OS145] Length = 680 Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 137/504 (27%), Positives = 227/504 (45%), Gaps = 44/504 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N HIGH I AD+ RF +L G + + D HG I AQ Sbjct: 7 KILVTNALPYANGPIHIGHLLGYIQADIWVRFQKLRGHECHYMCADDAHGTPIMLKAQQL 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + R+ +I +DD+ T + + +++++ D G I Sbjct: 67 GITPEQMIGDMQRSHEADFAGFNIGFDDYYTTHSEENKALAETIYQRLDDAGHIKTEVIE 126 Query: 126 GWYSLRDEAYYND-----DEVYKGADGQY------YNAQHNPV--------------QWM 160 Y + + D D GA+ QY A + P + Sbjct: 127 QLYDPEKKMFLPDRFVKGDCPECGAEDQYGDNCDVCGATYAPTDLKNPRSVVSGATPELR 186 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + E YFF L A+ D L S+ S L E N++ + + GL+ +SR +G KI Sbjct: 187 QSEHYFFDLPAFGDMLKSWTRSGS---LQGEMANKLNEWFEQGLQRWDISRDAPYFGFKI 243 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHAI 273 P YVW+DA Y+++ + + G+ +W AD H IGKDI+ FH++ Sbjct: 244 PGTEDKYFYVWLDAPIGYMSSFKHYCDTTGNANWDDYWQADSTAEVYHFIGKDIIYFHSL 303 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L A P V++HGFI G K+SKS G I ++ + + LRY+ ++ Sbjct: 304 FWPAMLKGAQFRQPTNVWAHGFITVNGTKMSKSKGTFIKARTYLDHLNPEYLRYYFAAKL 363 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + +RVN+DL + N+ SR I K +DG + + +D ++L Sbjct: 364 TSRIDDLDLNLTDFAQRVNSDLVGKVINIASRCAGFITKKFDGKLSA----SVADSALLE 419 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV---LY 449 EI E + + +A+ ++++L ++Y ++PW+L K NPD AS V Sbjct: 420 DFQNAGTEIAELYEQREFSKAMREIMTLADRANQYIADKEPWQLIK-NPDAASEVHDTCS 478 Query: 450 VTVEVIRQLAILLQAFVPKLANKI 473 + + + R L + L VP+L+ + Sbjct: 479 LGINLFRILMVYLTPVVPELSKSV 502 >gi|163848994|ref|YP_001637038.1| methionyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl] gi|222526954|ref|YP_002571425.1| methionyl-tRNA synthetase [Chloroflexus sp. Y-400-fl] gi|187647712|sp|A9WKM1|SYM_CHLAA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|254782859|sp|B9LDY3|SYM_CHLSY RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|163670283|gb|ABY36649.1| methionyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl] gi|222450833|gb|ACM55099.1| methionyl-tRNA synthetase [Chloroflexus sp. Y-400-fl] Length = 600 Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 148/531 (27%), Positives = 250/531 (47%), Gaps = 66/531 (12%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E + ++ A Y N HIGH + AD+ AR+HRL G VL +GTDEHG I A Sbjct: 3 EHILVAVAWPYANGPRHIGHVAGFGVPADIFARYHRLRGNHVLMISGTDEHGTPITLVAD 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + D+ ++ D L +SYD F RTT H+ + +++ + ++G I + Sbjct: 63 KEGTTPQAIADRYNKIIGDDLYNLGLSYDIFTRTTTANHYAVTQDIFRTLYERGYIIRQE 122 Query: 124 YSGWYSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWME---------- 161 G +S D DE +G +Q +P + Sbjct: 123 TLGAFSATTGRTLPDRYIEGTCPICGYDEA-RGDQCDNCGSQLDPTDLINPRSKVDGQPP 181 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 E +F L A+ ++L ++ + + + RN ++F+K LK +++R +WG Sbjct: 182 VFKPTEHFFLDLPAFAEQLHAWIDRQTHWRPNV--RNFSLNFLKE-LKPRAITRD-LEWG 237 Query: 218 IKIPDDPQYI------MYVWIDALTNYLTTT-GYLDN---PDGSKAKFW--PADLHV--I 263 + IP P+Y+ +YVW DA+ YL+ + + N PD + +W PA H + Sbjct: 238 VPIPL-PEYVHRDDKKIYVWFDAVIGYLSASIEWARNSGQPDAWRT-WWQNPAARHFYFM 295 Query: 264 GKDILRFHAIYWPAFLLS-----------------ANLPLPKKVFSHGFILHKGEKISKS 306 GKD + FH + WPA LL L LP V S F+ +G+K S S Sbjct: 296 GKDNIVFHTVIWPAMLLGYGAGGDFGTDPSGTYQGVPLQLPYNVVSSEFLTMEGKKFSSS 355 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 G VI + + DALRYFL +D + +R N +L GNLV+R++ Sbjct: 356 RGIVIYVNDFLSRYDADALRYFLTIAGPENQDTDFTWAEFVRRNNDELVATWGNLVNRTL 415 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 + + K++ G +P PG T +DE ++ + L+ + + + AL++ + L ++V+ Sbjct: 416 TNVYKNF-GSVPQPGPLTATDEQLIQEVNGGLETVGDLLATARFKAALSEAMRLAAQVNI 474 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y Q+PW++ K++ +RA+T+ YV + + L I+ F+P + ++ + L Sbjct: 475 YLSEQEPWKVIKSDRERAATIWYVALRCVDTLKIIFTPFLPFSSQRLHEYL 525 >gi|237746649|ref|ZP_04577129.1| methionyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] gi|229378000|gb|EEO28091.1| methionyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] Length = 695 Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 157/521 (30%), Positives = 244/521 (46%), Gaps = 59/521 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-----GLDVLFTTGTDEHGQKIAK 60 KL+++TA+ Y NA HIGH E I AD+ RF R+ +V F D HG I Sbjct: 4 KLFVTTALPYANAPFHIGHIMEYIQADIWVRFQRMQQDNGKQREVHFVGADDVHGAPIMI 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ AG T + FV + + + IS+D++ T +++ R +++++ KG I Sbjct: 64 AAEKAGKTPQEFVAEIAAGRAAPLNGFLISFDNWHSTDGSENYELSREIYRRLKAKGLIE 123 Query: 121 KGCYSGWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWM--- 160 ++ E + D E K GA QY + NP + Sbjct: 124 SKTIEQFFDPVKEMFLPDRYIKGECPKCGAKDQYGDTCESCSSVYTPTELKNPYSILTGA 183 Query: 161 -----EEEGYFFRLSAYQ------DKLLSYYESHPEFILPIERRNEVISFV------KSG 203 + E +FF+LS Q + L + P L E N+ ++ ++ Sbjct: 184 TPVMKQSEHFFFKLSDPQCTAFLKEWTLGNVDGEPR--LQPEVANKAREWLEGKEGEENA 241 Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---- 259 L D +SR +GI+IPD P YVW+DA YL + N G + AD Sbjct: 242 LSDWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNYFNKTGGDYDAFMADPETE 301 Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 H IGKDI+ FH ++WPA L A++ +P V+ HGFI GEK+SKS G I P+ + Sbjct: 302 QYHFIGKDIIYFHTLFWPAMLHFADMRVPDNVYVHGFITVGGEKMSKSRGTGISPLRYL- 360 Query: 319 EVGVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 E+G++ LRY+L +++ +D + D RVNADL N+ SR+ I K + G Sbjct: 361 EIGMNPEWLRYYLAAKLSDRVEDIDFTGDDFIARVNADLVGKYVNIASRAAGFITKRFGG 420 Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 + + D +L EI E + + +AL Q++ L EV+ Y DA KPW Sbjct: 421 KLAK--DWKTEDTPVLDTLRAASGEIAELYEKREFGKALRQIMHLADEVNAYVDANKPWV 478 Query: 436 LKKTNPDRASTVLYVT---VEVIRQLAILLQAFVPKLANKI 473 L K +P+++ + V +E R L+I L+ +P ++ K+ Sbjct: 479 LAK-DPEKSEALHQVCTRLLEAFRILSIYLKPVLPAVSEKV 518 >gi|238898868|ref|YP_002924550.1| methionine tRNA synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259511559|sp|C4K759|SYM_HAMD5 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|229466628|gb|ACQ68402.1| methionine tRNA synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 545 Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 140/506 (27%), Positives = 239/506 (47%), Gaps = 48/506 (9%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I AD+ R+ R+ G +V F D HG I A+ Sbjct: 6 KKILVTCALPYANGPIHLGHMLEHIQADIWVRYQRMRGHEVYFICADDAHGTAIMLKAEK 65 Query: 65 AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 +G+ + +++ N ++ D + L ISYD + T + + +++++ KG I K Sbjct: 66 SGINPEKMIEEINQQHQNDFSGFL-ISYDHYYSTHSDENRELSVAIYQRLKAKGHIKKRA 124 Query: 124 YSGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH-----------NP 156 S Y + + D V KG A G Y++ P Sbjct: 125 ISQLYDPEKKLFLPDRFV-KGTCPKCQAPNQYGDNCEACGSTYSSTELIAPKSEVSGATP 183 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 V E E +FF L A+ L + S L + N++ +++ SGL+ ++R T + Sbjct: 184 V-IRESEHFFFDLPAFTGMLTQWIHSGA---LQEQVANKMQTWLTSGLRQWDITRDTPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDG-SKAKFWPADL-----HVIGKDILR 269 G +IPD P YVW+DA Y+ + + D + S +FW D H IGKDI+ Sbjct: 240 GFEIPDAPDKYFYVWLDAPIGYMGSFKNFCDKKENVSFDEFWQTDTKTELYHFIGKDIVY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH+++WPA L ++ P +F HG+I G K+SKS G I+ + ++ + D LRY+ Sbjct: 300 FHSLFWPAVLEGSDFRKPTNLFVHGYITVNGAKMSKSRGTFIEASDYLKHLDPDCLRYYY 359 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +RVNADL N + NL +R+ S I K + G++ A +E Sbjct: 360 AAKLSSHIDDIDLNLEDFVQRVNADLVNKVVNLAARNASFINKKFAGILSKELADSELYF 419 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--ST 446 + + R+ + +A+ ++++L +RY D Q PW L K D A + Sbjct: 420 TFVQAGLRIANAYHARETS----KAIREIMALADLANRYVDEQAPWVLAKKEVDEAKLQS 475 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472 V + + + R L L+ +P L+ + Sbjct: 476 VCSMGIHLFRILMTYLKPVLPALSER 501 >gi|29654984|ref|NP_820676.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 493] gi|161830148|ref|YP_001597519.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 331] gi|68566002|sp|Q83B24|SYM_COXBU RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|189083259|sp|A9NA60|SYM_COXBR RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|29542253|gb|AAO91190.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 493] gi|161762015|gb|ABX77657.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 331] Length = 546 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 149/547 (27%), Positives = 242/547 (44%), Gaps = 52/547 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E+ ++ ++ A+ Y N H+GH E I AD+ RF RL G D LF G D HG I A Sbjct: 4 EKRQILVTAALPYANGPIHLGHMVEHIQADIWVRFQRLKGNDCLFICGEDAHGTAIMITA 63 Query: 63 QNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 Q G+ + V + + + RD+ L I YD+F T + + +++ ++ DKGDI+ Sbjct: 64 QKQGLPPEALVAKMHKEHARDLGGFL-IEYDNFYTTHSPENRELAELIYTRLKDKGDIFA 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------- 161 S Y E + D + GA QY A ++P + ++ Sbjct: 123 KTISQAYDPVKEIFLPDRFIRGTCPRCGAKDQYGDVCEVCGATYSPTELIDPVSALSGAK 182 Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 E +FF L+ Y L + ++ L + N++ + LK +SR + Sbjct: 183 PIEKNSEHFFFSLNRYTQLLKKWIDAGH---LQPQVANKLKEWFSEDLKPWDISRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILR 269 G +IP YVW+DA Y+ + L P + +W H +GKDI+ Sbjct: 240 GFEIPHAANKYFYVWLDAPIGYMASLKNLSKQRPSVNFDAYWKEGSQTELYHFVGKDIVY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FHA++WPA L A LP ++ HG++ G+K+SKS G I ++ + + LRY+ Sbjct: 300 FHALFWPAMLSGAGFRLPTTIYVHGYLTVNGQKMSKSRGTFITAHHYLDHLSPEYLRYYY 359 Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ +D + D +RVNADL NL SR I K++ G + + E Sbjct: 360 AAKLSAQVEDIDLNLDDFIQRVNADLIGKYVNLASRCAGFITKNFGGKLANELPEPDLYE 419 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 S L + Q I + ++ +A+ ++SL ++Y DA+KPW L K A Sbjct: 420 SFL----QTEQTITDYYESLNYSKAVRVIMSLADRANQYIDAKKPWALAKEINQEAQVQA 475 Query: 449 YVT--VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT--FD 504 T + + + L L+ +P A K+ L C + LK + H F+ Sbjct: 476 VCTQGLNLFKILTTYLKPILPVTAKKVEQFL------NCDELNFANLKTPLLDHSVNPFE 529 Query: 505 PIFPRFL 511 P+ R L Sbjct: 530 PLMQRLL 536 >gi|154706261|ref|YP_001423731.1| methionyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] gi|165918316|ref|ZP_02218402.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 334] gi|189083258|sp|A9KDF8|SYM_COXBN RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|154355547|gb|ABS77009.1| methionyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] gi|165917966|gb|EDR36570.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 334] Length = 546 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 149/547 (27%), Positives = 242/547 (44%), Gaps = 52/547 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E+ ++ ++ A+ Y N H+GH E I AD+ RF RL G D LF G D HG I A Sbjct: 4 EKRQILVTAALPYANGPIHLGHMVEHIQADIWVRFQRLKGNDCLFICGEDAHGTAIMITA 63 Query: 63 QNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 Q G+ + V + + + RD+ L I YD+F T + + +++ ++ DKGDI+ Sbjct: 64 QKQGLPPEALVAKMHKEHARDLGGFL-IEYDNFYTTHSPENRELAELIYTRLKDKGDIFA 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------- 161 S Y E + D + GA QY A ++P + ++ Sbjct: 123 KTISQAYDPVKEIFLPDRFIRGTCPRCGAKDQYGDVCEVCGATYSPTELIDPVSALSGAK 182 Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 E +FF L+ Y L + ++ L + N++ + LK +SR + Sbjct: 183 PIEKNSEHFFFSLNRYTQLLKKWIDAGH---LQPQVANKLKEWFSEDLKPWDISRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILR 269 G +IP YVW+DA Y+ + L P + +W H +GKDI+ Sbjct: 240 GFEIPHAANKYFYVWLDAPIGYMASLKNLSKQRPSVNFDAYWKEGSQTELYHFVGKDIVY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FHA++WPA L A LP ++ HG++ G+K+SKS G I ++ + + LRY+ Sbjct: 300 FHALFWPAMLSGAGFRLPTAIYVHGYLTVNGQKMSKSRGTFITAHHYLDHLSPEYLRYYY 359 Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ +D + D +RVNADL NL SR I K++ G + + E Sbjct: 360 AAKLSAQVEDIDLNLDDFIQRVNADLIGKYVNLASRCAGFITKNFGGKLANELPEPDLYE 419 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 S L + Q I + ++ +A+ ++SL ++Y DA+KPW L K A Sbjct: 420 SFL----QTEQTITDYYESLNYSKAVRVIMSLADRANQYIDAKKPWALAKEINQEAQVQA 475 Query: 449 YVT--VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT--FD 504 T + + + L L+ +P A K+ L C + LK + H F+ Sbjct: 476 VCTQGLNLFKILTTYLKPILPVTAKKVEQFL------NCDELNFANLKTPLLDHSVNPFE 529 Query: 505 PIFPRFL 511 P+ R L Sbjct: 530 PLMQRLL 536 >gi|212211972|ref|YP_002302908.1| methionyl-tRNA synthetase [Coxiella burnetii CbuG_Q212] gi|238064876|sp|B6J3N7|SYM_COXB2 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|212010382|gb|ACJ17763.1| methionyl-tRNA synthetase [Coxiella burnetii CbuG_Q212] Length = 546 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 149/547 (27%), Positives = 242/547 (44%), Gaps = 52/547 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E+ ++ ++ A+ Y N H+GH E I AD+ RF RL G D LF G D HG I A Sbjct: 4 EKRQILVTAALPYANGPIHLGHMVEHIQADIWVRFQRLKGNDCLFICGEDAHGTAIMITA 63 Query: 63 QNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 Q G+ + V + + + RD+ L I YD+F T + + +++ ++ DKGDI+ Sbjct: 64 QKQGLPPEALVAKMHKEHARDLGGFL-IEYDNFYTTHSPENRELAELIYTRLKDKGDIFA 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------- 161 S Y E + D + GA QY A ++P + ++ Sbjct: 123 KTISQAYDPVKEIFLPDRFIRGTCPRCGAKDQYGDVCEVCGATYSPTELIDPVSALSGAK 182 Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 E +FF L+ Y L + ++ L + N++ + LK +SR + Sbjct: 183 PIEKNSEHFFFSLNRYTQLLKKWIDAGH---LQPQVANKLKEWFSEDLKPWDISRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILR 269 G +IP YVW+DA Y+ + L P + +W H +GKDI+ Sbjct: 240 GFEIPHAANKYFYVWLDAPIGYMASLKNLSKQRPSVNFDAYWKEGSQTELYHFVGKDIVY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FHA++WPA L A LP ++ HG++ G+K+SKS G I ++ + + LRY+ Sbjct: 300 FHALFWPAMLSGAGFRLPTAIYVHGYLTVNGQKMSKSRGTFITAHHYLDHLSPEYLRYYY 359 Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ +D + D +RVNADL NL SR I K++ G + + E Sbjct: 360 AAKLSAQVEDIDLNLDDFIQRVNADLIGKYVNLASRCAGFITKNFGGKLANELPELDLYE 419 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 S L + Q I + ++ +A+ ++SL ++Y DA+KPW L K A Sbjct: 420 SFL----QTEQTITDYYESLNYSKAVRVIMSLADRANQYIDAKKPWALAKEINQEAQVQA 475 Query: 449 YVT--VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT--FD 504 T + + + L L+ +P A K+ L C + LK + H F+ Sbjct: 476 VCTQGLNLFKILTTYLKPILPVTAKKVEQFL------NCDELNFANLKTPLLDHSVNPFE 529 Query: 505 PIFPRFL 511 P+ R L Sbjct: 530 PLMQRLL 536 >gi|157144942|ref|YP_001452261.1| methionyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895] gi|187647714|sp|A8AEB2|SYM_CITK8 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|157082147|gb|ABV11825.1| hypothetical protein CKO_00671 [Citrobacter koseri ATCC BAA-895] Length = 677 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 131/506 (25%), Positives = 233/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHQVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L N G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKFFYVWLDAPIGYMGSFKNLCNKRGDLTSFDDYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L + P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D + Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPA 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADMANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503 >gi|256810012|ref|YP_003127381.1| methionyl-tRNA synthetase [Methanocaldococcus fervens AG86] gi|256793212|gb|ACV23881.1| methionyl-tRNA synthetase [Methanocaldococcus fervens AG86] Length = 650 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 134/500 (26%), Positives = 240/500 (48%), Gaps = 41/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I+TA+AY N H+GHA I AD++ ++ +L G + + GTD HG I A+ G Sbjct: 5 ITTALAYTNGPLHLGHARSTYIPADIMCKYLKLRGEEAIHVGGTDNHGVPITLTAEKEGK 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + V++ ++ D+L + +D F +T + H +T + + K+ + G IY+ + Sbjct: 65 SPEEIVEKYHNEIKEDLDLLGVEFDAFGKTHSQIHIETAQEFYLKLKENGYIYEKEIEQF 124 Query: 128 YSLRDEAYYNDDEV-----YKGADGQ-------------------YYNAQHNPVQWMEEE 163 Y + + + D V Y G + + Y + + + Sbjct: 125 YCPKCKKFLPDRYVEGICPYCGGEARGDHCEVCGRHLEPFELKDPYCVICKGKPEIRKTK 184 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 YFF+LSA +++L Y ++ E +P +N ++++K L D +SR WG+ IP Sbjct: 185 HYFFKLSALKEELEEYIKNAEE--MPEHVKNMALNWIKE-LHDWDISR-DISWGVPIPGT 240 Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFL 279 Q +MYVW++A Y++ T L + K+W H IGKDI HA++WP L Sbjct: 241 NQ-VMYVWLEAPIGYISFTKMLGD---VWKKYWLEKDTKIYHFIGKDITVHHAVFWPGML 296 Query: 280 LS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 ++ + LP V S G++ +G K+S S V+ + ++ D LRY+LV KD Sbjct: 297 IAHGDYNLPTAVVSGGYLTLEGRKMSTSKRWVVWVKDFVKNFDADYLRYYLVMSAPLYKD 356 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRV 397 + D K ++N +L N IGN R ++ + + + I E D+++L C Sbjct: 357 CDFSFDDFKNKINNELINIIGNFTHRVLTFTHRKFKKVPIVDESRLKEEDKNLLKKCEET 416 Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 ++ + +N+++ AL ++ L E + YF +PW + N R +LY + ++ Sbjct: 417 IEAVDKNIRSFKFRDALVNILHLAIEGNSYFQKMEPWAVDDEN--RLEEILYTCCKTVKT 474 Query: 458 LAILLQAFVPKLANKIFDIL 477 L LL ++PK + + D++ Sbjct: 475 LVYLLYPYMPKKSLALLDLM 494 >gi|120612475|ref|YP_972153.1| methionyl-tRNA synthetase [Acidovorax citrulli AAC00-1] gi|187645701|sp|A1TTU1|SYM_ACIAC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|120590939|gb|ABM34379.1| methionyl-tRNA synthetase [Acidovorax citrulli AAC00-1] Length = 706 Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 145/519 (27%), Positives = 233/519 (44%), Gaps = 49/519 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K++++TA+ Y N HIGH E I AD+ RF R+ G +V F D HG I AA+ A Sbjct: 5 KIFVTTALPYANGNFHIGHIMEYIQADIWVRFQRMQGAEVNFVGADDTHGAPIMIAAEKA 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T + FV + + + I +D++ T +H+ R +++ + G I Sbjct: 65 GKTPQQFVADIAAGRKPYLEGFHIRFDNWHSTDAPENHELARQIYRDLQAAGLIETRTIE 124 Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWME------------- 161 ++ + D + G + + A + P +E Sbjct: 125 QFFDPEKNMFLPDRFIKGECPRCHARDQYGDNCENCGAVYAPTDLIEPYSALSGAKPVLK 184 Query: 162 -EEGYFFRLS-----AYQDKLLSYYESHPEFILPIER----RNEVISFVKSGLKDLSLSR 211 + +FF+LS A+ + PE ++ R GL D +SR Sbjct: 185 SSDHFFFQLSDPRCVAFLQEWTQDGRLQPEVANKVKEWFSVRTNPDGTTSEGLGDWDISR 244 Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKD 266 +GI+IPD P YVW+DA YL + L G + AD +H IGKD Sbjct: 245 DAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLEKRGQSYDDYVADPQLEQVHFIGKD 304 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDA- 324 I+ FH ++WPA L + P VF HGF+ ++ GEK+SKS G +DP++ + +G++A Sbjct: 305 IVTFHTLFWPAMLKFSGRKTPDAVFVHGFLTVNNGEKMSKSRGTGLDPLKYL-GLGMNAE 363 Query: 325 -LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+L ++ +D ++ + RVN+DL N+ SR+ + K + G + P A Sbjct: 364 WLRYYLAAKLNGRNEDIDFNAEDFMARVNSDLIGKFVNIASRAAGFLTKRFGGRLGAPDA 423 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 ++L I E + + RA+ + + L V+ Y DA+KPWEL K Sbjct: 424 ---DGAALLEALRAQAGAIAEAYERRDTARAVRETMLLADRVNEYVDARKPWELAKQEGQ 480 Query: 443 RASTVLYVT--VEVIRQLAILLQAFVPKLANKIFDILFV 479 A+ T +E R L + L+ +P LA ++ L V Sbjct: 481 EAALQAACTTCIEAFRLLTLYLKPVLPALAAQVEAFLNV 519 >gi|68565977|sp|Q6A707|SYM_PROAC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|50840790|gb|AAT83457.1| methionyl-tRNA synthetase [Propionibacterium acnes KPA171202] gi|314924211|gb|EFS88042.1| methionyl-tRNA synthetase [Propionibacterium acnes HL001PA1] gi|314965000|gb|EFT09099.1| methionyl-tRNA synthetase [Propionibacterium acnes HL082PA2] gi|315093650|gb|EFT65626.1| methionyl-tRNA synthetase [Propionibacterium acnes HL060PA1] gi|315103869|gb|EFT75845.1| methionyl-tRNA synthetase [Propionibacterium acnes HL050PA2] gi|315106150|gb|EFT78126.1| methionyl-tRNA synthetase [Propionibacterium acnes HL030PA1] gi|327325414|gb|EGE67218.1| methionine--tRNA ligase [Propionibacterium acnes HL103PA1] Length = 601 Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 145/527 (27%), Positives = 239/527 (45%), Gaps = 67/527 (12%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + A+A+P N HIGH + +DV AR+ R+ G VL +G+D HG I+ A Sbjct: 14 VLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 73 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK---- 121 GVT + ++ R L +SYD + T H + ++ ++ + G + K Sbjct: 74 GVTAQECAEKYHRIIAADLQGLGLSYDLYTSTLTDNHAHVTQEIFTRLHENGYVVKRSEM 133 Query: 122 GCY-------------------SGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWM 160 G + G+ R + N AD G ++ Sbjct: 134 GAFEPSTGRTLPDRYIEGTCPVCGYDDARGDQCDNCGRQLDPADLIGPRSKTTGAAPEFR 193 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218 E E +F L A + L S+ ++ ++ R V+ F + L++L T DWGI Sbjct: 194 ETEHFFLDLPALAESLASWIDTRTDW------RPNVLKFSHNLLEELRPRAITRDLDWGI 247 Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIGK 265 ++P D+P +YVW DA+ YL+ + + PD + +FW + +GK Sbjct: 248 RVPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYFMGK 306 Query: 266 DILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSLGNV 310 D + FH++ WP LL N L LP ++ S F+ G K+S S G Sbjct: 307 DNIVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSRGAT 366 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 I + + E G DALRYF+ +D + + +RVN +LAN GNLV+RS+SM Sbjct: 367 IFVGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSISMAF 426 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 K+ IP G T++D +L + + + + A+ + + +V + Y A Sbjct: 427 KNCH-EIPAAGELTDADRELLDAAAAGFDTVGGLLAHARFKAAITEAMRIVGLANAYISA 485 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++PW+LK NP+R TVL+V ++V+ + ++ F+P A KI++ L Sbjct: 486 EEPWKLKD-NPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEAL 531 >gi|328906096|gb|EGG25871.1| methionine--tRNA ligase [Propionibacterium sp. P08] Length = 601 Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 147/530 (27%), Positives = 242/530 (45%), Gaps = 73/530 (13%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 I A+A+P N HIGH + +DV AR+ R+ G VL +G+D HG I+ A Sbjct: 14 ILAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 73 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + ++ R L +SYD + T H + ++ ++ + G + K Sbjct: 74 GLTAQECAEKYHRVIAADLQGLGLSYDLYTSTMTDNHAHVTQEIFTRLHENGYVVKKSEM 133 Query: 126 GWY------SLRDE--------AYYNDDEVYKGADGQYYNAQHNPV-------------- 157 G + +L D Y+D +G Q +P Sbjct: 134 GAFEPSTGRTLPDRYIEGTCPVCGYDD---ARGDQCDNCGRQLDPADLINPKSKTTGAAP 190 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215 ++ E E +F L A + L S+ ++ ++ R ++ F + L++L T D Sbjct: 191 EFRETEHFFLDLPAVAESLTSWIDTRTDW------RPNILKFSHNLLEELRPRAITRDLD 244 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262 WGI++P D+P +YVW DA+ YL+ + + PD + +FW + Sbjct: 245 WGIRVPVEGWRDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYF 303 Query: 263 IGKDILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSL 307 +GKD + FH++ WP LL N L LP ++ S F+ G K+S S Sbjct: 304 MGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEKLGILDLPTEIVSSEFLTMSGSKVSNSR 363 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 G I + + E G DALRYF+ +D + + +RVN +LAN GNLV+R +S Sbjct: 364 GATIFVGDFLREFGPDALRYFIAIAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRLIS 423 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 M K+ G IP G T++D +L + E + + A+ + + +V + Y Sbjct: 424 MAFKNCHG-IPAAGELTDADRQLLDASVAGFDVVGELLAHAKFKAAITEAMRIVGLANAY 482 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A++PW+LK NP+R TVL+V ++V+ + +L F+P A KI++ L Sbjct: 483 ISAEEPWKLKD-NPERRDTVLHVALQVVSDVNTMLTPFMPHSAQKIYEAL 531 >gi|282855068|ref|ZP_06264400.1| methionine--tRNA ligase [Propionibacterium acnes J139] gi|282581656|gb|EFB87041.1| methionine--tRNA ligase [Propionibacterium acnes J139] gi|314982128|gb|EFT26221.1| methionyl-tRNA synthetase [Propionibacterium acnes HL110PA3] gi|315090367|gb|EFT62343.1| methionyl-tRNA synthetase [Propionibacterium acnes HL110PA4] Length = 601 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 145/527 (27%), Positives = 239/527 (45%), Gaps = 67/527 (12%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + A+A+P N HIGH + +DV AR+ R+ G VL +G+D HG I+ A Sbjct: 14 VLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 73 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK---- 121 GVT + ++ R L +SYD + T H + ++ ++ + G + K Sbjct: 74 GVTAQECAEKYHRIIAADLQGLGLSYDLYTSTLTDNHAHVTQEIFTRLHENGYVVKRSEM 133 Query: 122 GCY-------------------SGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWM 160 G + G+ R + N AD G ++ Sbjct: 134 GAFESSTGRTLPDRYIEGTCPVCGYDDARGDQCDNCGRQLDPADLIGPRSKTTGAAPEFR 193 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218 E E +F L A + L S+ ++ ++ R V+ F + L++L T DWGI Sbjct: 194 ETEHFFLDLPALAESLASWIDTRTDW------RPNVLKFSHNLLEELRPRAITRDLDWGI 247 Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIGK 265 ++P D+P +YVW DA+ YL+ + + PD + +FW + +GK Sbjct: 248 RVPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYFMGK 306 Query: 266 DILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSLGNV 310 D + FH++ WP LL N L LP ++ S F+ G K+S S G Sbjct: 307 DNIVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSRGAT 366 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 I + + E G DALRYF+ +D + + +RVN +LAN GNLV+RS+SM Sbjct: 367 IFVGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSISMAF 426 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 K+ IP G T++D +L + + + + A+ + + +V + Y A Sbjct: 427 KNCH-EIPAAGELTDADRELLDAAAAGFDTVGGLLAHARFKAAITEAMRIVGLANAYISA 485 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++PW+LK NP+R TVL+V ++V+ + ++ F+P A KI++ L Sbjct: 486 EEPWKLKD-NPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEAL 531 >gi|284036390|ref|YP_003386320.1| methionyl-tRNA synthetase [Spirosoma linguale DSM 74] gi|283815683|gb|ADB37521.1| methionyl-tRNA synthetase [Spirosoma linguale DSM 74] Length = 682 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 141/517 (27%), Positives = 240/517 (46%), Gaps = 39/517 (7%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 ++ ++ ++ A+ Y N HIGH A + AD+ R+ R G DV F +GTDEHG I Sbjct: 2 LENPQRYTVTAALIYANGPIHIGHIAGCYLPADIYVRYLRSTGKDVAFISGTDEHGVPIT 61 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + VD+ + IS+D + RT+ HH+T + + + +KGD Sbjct: 62 IKAKKEGITPQEVVDKYYGQIKQAFSDFGISFDIYSRTSNAIHHETSQEFFTNLYNKGDF 121 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWME------- 161 + +Y + D + G + +P + +E Sbjct: 122 DEEVTEQYYDEVAGQFLADRYIVGTCPVCGNPNAYGDQCERCGTALSPTELIEPHSTLSG 181 Query: 162 -------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + +F L Q K+ Y SHPE+ + + S++K GL+ +++R Sbjct: 182 SKPVLRSTKNWFLPLDRMQPKIEEYVNSHPEWKTNVA--GQCQSWLKEGLRPRAMTRD-L 238 Query: 215 DWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267 DWGIK+P D ++YVW DA Y++ T G + + D +H IGKD Sbjct: 239 DWGIKVPLPDADGKVLYVWFDAPIGYISMTKEWAAEQGRDWELYWRDEHTKLVHFIGKDN 298 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324 + FH I +PA L++ + L V ++ F+ +G+KIS S + E +EE+ D Sbjct: 299 IVFHCIIFPAMLMAEGSFILADNVPANEFMNLEGDKISTSRNWAVWLHEYLEELPGKQDV 358 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R NA+L GN V+R+V + K DG +P G T Sbjct: 359 LRYVLAANAPETKDSEFTWKDFQTRNNAELVGIFGNFVNRAVVLTQKFCDGKVPAIGELT 418 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 D+ IL + I + + AL ++ L ++Y +PW++ KT+P RA Sbjct: 419 AYDQQILDELALFPDRIGQAIGAYKFREALGHLMDLARLGNKYLAETEPWKVVKTDPLRA 478 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 +T+L + +++ L+I+ + F+P + K+ + L + + Sbjct: 479 NTILNIALQISANLSIVCEPFLPFTSQKLRNQLNITE 515 >gi|302530295|ref|ZP_07282637.1| methionyl-tRNA synthetase [Streptomyces sp. AA4] gi|302439190|gb|EFL11006.1| methionyl-tRNA synthetase [Streptomyces sp. AA4] Length = 594 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 154/523 (29%), Positives = 238/523 (45%), Gaps = 64/523 (12%) Query: 11 TAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 TA+A+P N HIGH + +DV +R+ R+ G VL +GTDEHG I A G+ Sbjct: 3 TAVAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNRVLMVSGTDEHGTPITVQADKEGM 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + D+ +R + L +SYD F RTT H + ++ ++ G + G Sbjct: 63 TPQQTADKYTRQIDEDLRGLGLSYDLFTRTTTGNHAAVTQEIFLALNRNGYVVPKTTRGA 122 Query: 128 YSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QWMEE 162 S D + Y GA G + N + +++E Sbjct: 123 ISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDAAELINPKSRINGETPKFVET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKI 220 E YF L A+ L + + ++ R V++F K+ + D+ T DWG+KI Sbjct: 183 EHYFLDLPAFTQTLGDWLGTKTDW------RPNVLNFTKNLIDDMRPRPITRDLDWGVKI 236 Query: 221 P-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGKDIL 268 P D P YVW DA+ Y + + +G+ + W A+ + +GKD + Sbjct: 237 PLDGWRDQPLKRFYVWFDAVIGYFSASVEWARRNGTPDAWQEWWANPDARAYYFMGKDNI 296 Query: 269 RFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 FHA WPA LL N L LP ++ S F+ G K S S G VI Sbjct: 297 TFHAQIWPALLLGQNGAGDRGGEPGKYGKLHLPDEIVSSEFLTMSGSKFSTSRGTVIYVH 356 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374 + + E G DALRYF+ +D + D +R N +LAN GNLV+RS+SM K+ + Sbjct: 357 DFLREFGPDALRYFISVAGPETQDTDFTWDEFVRRTNFELANEWGNLVNRSISMAHKN-N 415 Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 G IP P A +DE + ++ + + ++ A A+ + +V+ +RY Q+PW Sbjct: 416 GAIPAPTAPAPADEELKALSRQAFETAGGHLARSRFKLAAAEAMRVVTAANRYLSDQEPW 475 Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +LK +PDR VL+ ++V+ LL F+P A K+ + L Sbjct: 476 KLKD-DPDRRDAVLHTALQVVSDANTLLTPFLPHSAQKVHEAL 517 >gi|167551107|ref|ZP_02344862.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205324014|gb|EDZ11853.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 673 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 131/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ T A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLATELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503 >gi|295098166|emb|CBK87256.1| methionyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 677 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 131/505 (25%), Positives = 232/505 (45%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + + + S+ + DISYD++ T + + +++ ++ + G I Sbjct: 66 LGISPEQMIAEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLKAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVLSAELA----DPE 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAAAVGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P+LA + Sbjct: 478 CTMGLNMFRVLMTWLKPVLPQLAAR 502 >gi|161621793|ref|YP_056415.2| methionyl-tRNA synthetase [Propionibacterium acnes KPA171202] Length = 592 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 145/527 (27%), Positives = 239/527 (45%), Gaps = 67/527 (12%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + A+A+P N HIGH + +DV AR+ R+ G VL +G+D HG I+ A Sbjct: 5 VLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK---- 121 GVT + ++ R L +SYD + T H + ++ ++ + G + K Sbjct: 65 GVTAQECAEKYHRIIAADLQGLGLSYDLYTSTLTDNHAHVTQEIFTRLHENGYVVKRSEM 124 Query: 122 GCY-------------------SGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWM 160 G + G+ R + N AD G ++ Sbjct: 125 GAFEPSTGRTLPDRYIEGTCPVCGYDDARGDQCDNCGRQLDPADLIGPRSKTTGAAPEFR 184 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218 E E +F L A + L S+ ++ ++ R V+ F + L++L T DWGI Sbjct: 185 ETEHFFLDLPALAESLASWIDTRTDW------RPNVLKFSHNLLEELRPRAITRDLDWGI 238 Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIGK 265 ++P D+P +YVW DA+ YL+ + + PD + +FW + +GK Sbjct: 239 RVPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYFMGK 297 Query: 266 DILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSLGNV 310 D + FH++ WP LL N L LP ++ S F+ G K+S S G Sbjct: 298 DNIVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSRGAT 357 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 I + + E G DALRYF+ +D + + +RVN +LAN GNLV+RS+SM Sbjct: 358 IFVGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSISMAF 417 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 K+ IP G T++D +L + + + + A+ + + +V + Y A Sbjct: 418 KNCH-EIPAAGELTDADRELLDAAAAGFDTVGGLLAHARFKAAITEAMRIVGLANAYISA 476 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++PW+LK NP+R TVL+V ++V+ + ++ F+P A KI++ L Sbjct: 477 EEPWKLKD-NPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEAL 522 >gi|313835960|gb|EFS73674.1| methionyl-tRNA synthetase [Propionibacterium acnes HL037PA2] gi|314927197|gb|EFS91028.1| methionyl-tRNA synthetase [Propionibacterium acnes HL044PA1] gi|314970728|gb|EFT14826.1| methionyl-tRNA synthetase [Propionibacterium acnes HL037PA3] Length = 592 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 147/530 (27%), Positives = 242/530 (45%), Gaps = 73/530 (13%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 I A+A+P N HIGH + +DV AR+ R+ G VL +G+D HG I+ A Sbjct: 5 ILAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + ++ R L +SYD + T H + ++ ++ + G + K Sbjct: 65 GLTAQECAEKYHRVIAADLQGLGLSYDLYTSTMTDNHAHVTQEIFTRLHENGYVVKKSEM 124 Query: 126 GWY------SLRDE--------AYYNDDEVYKGADGQYYNAQHNPV-------------- 157 G + +L D Y+D +G Q +P Sbjct: 125 GAFEPSTGRTLPDRYIEGTCPVCGYDD---ARGDQCDNCGRQLDPADLINPKSKTTGAAP 181 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215 ++ E E +F L A + L S+ ++ ++ R ++ F + L++L T D Sbjct: 182 EFRETEHFFLDLPAVAESLTSWIDTRTDW------RPNILKFSHNLLEELRPRAITRDLD 235 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262 WGI++P D+P +YVW DA+ YL+ + + PD + +FW + Sbjct: 236 WGIRVPVEGWRDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYF 294 Query: 263 IGKDILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSL 307 +GKD + FH++ WP LL N L LP ++ S F+ G K+S S Sbjct: 295 MGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEKLGILDLPTEIVSSEFLTMSGSKVSNSR 354 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 G I + + E G DALRYF+ +D + + +RVN +LAN GNLV+R +S Sbjct: 355 GATIFVGDFLREFGPDALRYFIAIAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRLIS 414 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 M K+ G IP G T++D +L + E + + A+ + + +V + Y Sbjct: 415 MAFKNCHG-IPAAGELTDADRQLLDASVAGFDVVGELLAHAKFKAAITEAMRIVGLANAY 473 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A++PW+LK NP+R TVL+V ++V+ + +L F+P A KI++ L Sbjct: 474 ISAEEPWKLKD-NPERRDTVLHVALQVVSDVNTMLTPFMPHSAQKIYEAL 522 >gi|295136393|ref|YP_003587069.1| methionyl-tRNA synthetase [Zunongwangia profunda SM-A87] gi|294984408|gb|ADF54873.1| methionyl-tRNA synthetase [Zunongwangia profunda SM-A87] Length = 695 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 145/513 (28%), Positives = 245/513 (47%), Gaps = 39/513 (7%) Query: 9 ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I+ A+ Y N HIGH + + AD+ +RF R+ G DV F G+DEHG I A+ GV Sbjct: 10 ITAALPYTNGPIHIGHLSGVYVPADIYSRFLRMQGHDVAFVCGSDEHGVPITIKAKKEGV 69 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + VD+ +D + IS+D++ RT+ + HH T +KK+ D G + Sbjct: 70 TPQDIVDKYDEIIKDSFNNFGISFDNYSRTSAEIHHKTASAFFKKLYDDGKFIEETTEQL 129 Query: 128 YSLRDEAYYND------------DEVYKG---ADGQYYNAQH--NPVQWM--------EE 162 Y + + D +E Y + G NA NP + E Sbjct: 130 YDAEAKQFLADRFVTGTCPKCGNEEAYGDQCESCGTSLNATDLINPKSAITGATPTLKET 189 Query: 163 EGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 + +F L Y+ L + E H P +V S++ GL+ +++R DWGI +P Sbjct: 190 KHWFLPLDQYESWLKEWILEGHKSDWKP-NVYGQVKSWIDDGLRARAVTRD-LDWGIPVP 247 Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274 + ++YVW DA Y+++T +G + + D +H IGKD + FH I Sbjct: 248 VEGGEGKVLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDQDTKMVHFIGKDNIVFHCII 307 Query: 275 WPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLVR 331 +P L + + LP+ V ++ F+ +G+K+S S + E +E+ D LRY L Sbjct: 308 FPVMLKAHGDYILPENVPANEFLNLEGKKLSTSKNWAVWLHEYLEDFPGQQDVLRYALTA 367 Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 KD + + R N +L GN ++R V + K Y+G +PTP +++ DE + Sbjct: 368 NAPETKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKYYNGEVPTPAEYSKVDEETI 427 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451 + I +++ A A++++L ++Y ++PW+L KT+ +R T++YV Sbjct: 428 AALKAYPAVIASSIEKYRFREAQAELMNLARLGNKYLADEEPWKLVKTDEERTKTIMYVA 487 Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 +++ LA L + F+P +NK+ +IL + E R Sbjct: 488 LQIASALATLSEPFLPFTSNKLKEILKFSAEER 520 >gi|126662871|ref|ZP_01733870.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Flavobacteria bacterium BAL38] gi|126626250|gb|EAZ96939.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Flavobacteria bacterium BAL38] Length = 695 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 149/515 (28%), Positives = 247/515 (47%), Gaps = 41/515 (7%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 + E ++ I+ A+ Y N HIGH A + +D+ AR+ RL G DV F G+DEHG I+ Sbjct: 12 LSEAKRYTITAALPYTNGPIHIGHLAGVYVPSDIYARYLRLQGKDVAFVCGSDEHGVAIS 71 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +D+ R IS+D++ RT+ + HH T +KK+ D GD Sbjct: 72 MKARKEGITPQQVIDKYDGIIRQSFLDFGISFDNYSRTSSEIHHKTASEFFKKLYDNGDF 131 Query: 120 YKGCYSGWYSLRDEAYYND-----------------DEVYKGADGQYYNAQH--NPVQWM 160 + Y + + + D D+ K G NA NP + Sbjct: 132 IEETTEQLYDAKADQFLADRFVTGTCPKCDNPEAYGDQCEKC--GSTLNATDLINPKSTI 189 Query: 161 EEEGYFFRLSAYQDKLLSYYESH-PEFILPIERRN-------EVISFVKSGLKDLSLSRK 212 E + + + L+ YES E+IL + + +V S+V GL+ +++R Sbjct: 190 TGETPILKSTKHWFLPLNRYESFLREWILEGHKNDWKPNVYGQVKSWVDGGLEPRAVTRD 249 Query: 213 TFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP-AD---LHVIGK 265 DWGI +P + +YVW DA Y+++T +G +W AD +H IGK Sbjct: 250 -LDWGIDVPVEGAEGKKLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDADTKLVHFIGK 308 Query: 266 DILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GV 322 D + FH I +PA L + + LP V ++ F+ +G K+S S + E + + Sbjct: 309 DNIVFHCIIFPAMLKAEGSYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLLDFPEKQ 368 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D+LRY L KD + + R N +LA GN ++R V + K Y+G++P P Sbjct: 369 DSLRYALTANAPETKDNDFTWKDFQARNNNELAAIFGNFINRVVVLTNKYYNGIVPAPNE 428 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 F+E DE L+ I +++ AL +++++ ++Y ++PW++ K NP Sbjct: 429 FSEVDEQTLAELKAYPAVISSSIERYRFREALGELMNVARLGNKYLADEEPWKMVKENPA 488 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 R T +YV +++ LA+L + F+P A K+ +IL Sbjct: 489 RVQTQMYVALQIASALAVLSEPFLPFTAKKLSNIL 523 >gi|241765107|ref|ZP_04763097.1| methionyl-tRNA synthetase [Acidovorax delafieldii 2AN] gi|241365258|gb|EER60093.1| methionyl-tRNA synthetase [Acidovorax delafieldii 2AN] Length = 694 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 154/543 (28%), Positives = 235/543 (43%), Gaps = 49/543 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M KL+++TA+ Y N HIGH E I AD+ R RL G +V F D HG I Sbjct: 1 MSSARKLFVTTALPYANGNFHIGHIMEYIQADIWVRTQRLLGNEVNFVGADDTHGAPIMI 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ AG T + FV + + D I +D++ T +H + ++ + G I Sbjct: 61 AAEKAGKTPQQFVADIAAGRKQYLDGFHIQFDNWHSTDAPENHQLAQQIYLDLKANGLIE 120 Query: 121 KGCYSGWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWM--------- 160 ++ + D E K G + + A + P + Sbjct: 121 TRTIEQFFDPEKNMFLPDRFIKGECPKCHAKDQYGDNCEVCGAVYAPTDLINPYSALSGA 180 Query: 161 -----EEEGYFFRLS-----AYQDKLLSYYESHPEFILPIER----RNEVISFVKSGLKD 206 E +FF+LS A+ + PE + R GL D Sbjct: 181 TPVLKSSEHFFFKLSDPRCVAFLEDWTQNGRLQPEVANKVREWFTVRTNPDGSTSEGLGD 240 Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LH 261 +SR +GI+IPD P YVW+DA YL + L G + AD H Sbjct: 241 WDISRDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNLLEKRGQNYDAYMADPQLEQYH 300 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIE-E 319 IGKDI+ FH ++WPA L + +P VF HGF+ ++ GEK+SKS G +DP++ + Sbjct: 301 FIGKDIVTFHTLFWPATLKFSGRKVPDSVFVHGFLTVNNGEKMSKSRGTGLDPLKYLGLS 360 Query: 320 VGVDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 + + LRY+L +++ +D ++ D RVN+DL N+ SR+ I K + G + Sbjct: 361 MNAEWLRYYLATKLSSRNEDIDFNADDFMARVNSDLVGKYINIASRAAGFISKRFGGQL- 419 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 G + +++L V + E + + +AL + + L V+ Y D KPWEL K Sbjct: 420 --GEVSADGDALLDHLRTVAPSVIELLAEREYGKALRETMLLTDRVNAYVDQNKPWELAK 477 Query: 439 TN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496 R V +E R L ILL+ +P LA ++ L V E F S L G Sbjct: 478 QEGMEGRLQDVCTTCIEAFRVLTILLKPVLPALAAQVEAFLKV--EPFTFASAQTALGKG 535 Query: 497 FML 499 ++ Sbjct: 536 HVI 538 >gi|197262435|ref|ZP_03162509.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197240690|gb|EDY23310.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 704 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 131/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 33 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 92 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 93 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 152 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 153 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 211 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 212 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 268 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 269 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 328 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 329 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 388 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ T A D Sbjct: 389 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLATELA----DPQ 444 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 445 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 504 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 505 CSMGINLFRVLMTYLKPVLPTLSERV 530 >gi|124485549|ref|YP_001030165.1| methionyl-tRNA synthetase [Methanocorpusculum labreanum Z] gi|187647745|sp|A2SRE2|SYM_METLZ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|124363090|gb|ABN06898.1| methionyl-tRNA synthetase [Methanocorpusculum labreanum Z] Length = 673 Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 239/505 (47%), Gaps = 41/505 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N H+GH I D R+ R G D++F G+D HG I A+ T Sbjct: 8 VTCGLPYTNGFCHLGHLRTYIPGDFYVRYLRRLGDDIVFICGSDNHGTPIVVTAEAEKTT 67 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTE-KRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + +F ++ + I++D F T + HH T IL + + D+G +Y+ Sbjct: 68 PRAVSETYHAHFDNVFKSMGIAFDRFGMTDDPTNHHRTVSIL-QTLIDRGYVYEQTIQQS 126 Query: 128 YSLRDEAYYNDDEV----------YKGADGQYYNAQH-------NPV--------QWMEE 162 Y + + + D V +G + +H +PV + E+ Sbjct: 127 YCPKCKRFLPDRYVEGTCPYCGKHARGDECDSGCGRHLEPGEILDPVCATCGTKAELREQ 186 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222 + Y+F+LS+++D LL Y P + +N I +V++ LKD ++R DWG+K P Sbjct: 187 KHYYFKLSSFRDYLLEYL---PTLGGTLNAKNYAIGWVENELKDWCITR-MMDWGVKFPG 242 Query: 223 DPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFL 279 + YVW+DA Y++ T + + S K+W +H IG DI+ H ++WPA L Sbjct: 243 SDDLVCYVWVDAPIGYISFTEEWAKATNNSWQKYWCEGDRVHFIGSDIIYHHCVFWPAML 302 Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIACGK 337 A P V + G + GEK SKS GNV+ E + G+ D LRY+L+ + + Sbjct: 303 HGAGYQPPTAVVASGMVTIDGEKFSKSKGNVVWTKEDYLDKGLPADYLRYYLLAYTSHTR 362 Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397 + + + R+N +L N GN +RS+S++ + + P + I + R Sbjct: 363 ELDFSWKEFQARINNELVNTFGNFANRSMSLVKTKFGDVPQVP-----VEAEIFAEIERS 417 Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 L I E+++ A+ ++ L + + Y PW+L K +P A+ +L +++++ Sbjct: 418 LAAIEESVRAYEFKAAVDGILLLAAYGNSYISNAAPWKLIKEDPQAAAQILKNCLQIVKA 477 Query: 458 LAILLQAFVPKLANKIFDILFVADE 482 A+++Q +P+ + K++++L D+ Sbjct: 478 CALIMQPVMPESSQKLWEMLGYTDK 502 >gi|329947575|ref|ZP_08294734.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386] gi|328523890|gb|EGF50970.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386] Length = 615 Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 154/528 (29%), Positives = 242/528 (45%), Gaps = 63/528 (11%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +I +A+A+P N HIGH + +DV +R+ R+ G DVL +GTDEHG I AA Sbjct: 3 HILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ + D+N+R + L +SYD F RTT H+ + ++ + D G + + Sbjct: 63 EGVSARELADRNNRLIVEDLVALGLSYDLFTRTTAGNHYHVVQDMFTTVRDNGYMAQQVT 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159 S D + +GA G + N + ++ Sbjct: 123 RSAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDTCGNQLDPTDLIGPRSRINGETPEF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 +E +F L A L ++ + E R VI F ++ L D+ T DWG Sbjct: 183 VETTHWFLDLPALAQALGAWLD---EREASGTWRPNVIKFSQNLLGDIRPRAMTRDIDWG 239 Query: 218 IKIP---DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HVIGKD 266 I +P D P +YVW DA+ YL+ + +P+ +A +W P L + +GKD Sbjct: 240 IPVPGWEDQPTKRLYVWFDAVIGYLSASVEWARRSGDPEAWRA-WWNDPQALSYYFMGKD 298 Query: 267 ILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312 + FH+ WPA LL N L LP +V S F+ +G+K S S G VI Sbjct: 299 NIVFHSQIWPAELLGYNGQGESGGEPGRLGVLNLPTEVVSSEFLTMEGKKFSSSHGIVIY 358 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 + +E DALRYF+ D + +R N +L G GNLV+R+ SMI K Sbjct: 359 VRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGELVAGWGNLVNRTASMIHKR 418 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 + G IP PG ++D ++L + + + AL + + LV E ++Y + Sbjct: 419 F-GQIPEPGEPQDTDRALLDAVEAGFTSVGDLIAQHRQKAALGEAMRLVGEANKYVADTQ 477 Query: 433 PWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P++LK +P+ R +TVL+ +V+ L ++L F+P AN + +L Sbjct: 478 PFKLKGDDPETQARLATVLHTLAQVVADLNLMLSPFLPHAANDVDRVL 525 >gi|284007101|emb|CBA72376.1| methionyl-tRNA synthetase [Arsenophonus nasoniae] Length = 675 Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 136/505 (26%), Positives = 230/505 (45%), Gaps = 46/505 (9%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +KL ++ A+ Y N H+GH E I AD+ R+ R+ G V F D HG I AQ Sbjct: 6 KKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGKQVYFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + + + N + D+AD ISYD++ T + ++ + G I Sbjct: 66 LGITPEEMISKVNQEHQHDLAD-FAISYDNYHSTHSVENKTLSEQIYLTLKKNGFIQSKT 124 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 S Y + E + D V G + + A +NP + + Sbjct: 125 ISQLYDPKQEMFLPDRFVKGSCPKCQAADQYGDNCEVCGATYNPTELINPHSVISGATPE 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A+ L ++ S L + N++ + ++GL+ ++R +G Sbjct: 185 MRETEHFFFDLPAFSKMLQTWTRSGA---LQPQVANKMQEWFEAGLQQWDITRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKDILRFH 271 +IP++P YVW+DA Y+ T L PD A FW D H IGKDI+ FH Sbjct: 242 EIPNEPGKYFYVWLDAPIGYMGTFKNLCEKQPDIDFASFWQQDFTADLYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P +F HG+I G K+SKS G I ++++ D LRY+ Sbjct: 302 SLFWPAILEGSGYRKPTNIFVHGYITVNGAKMSKSRGTFITARAYLDQLDADCLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVN+D+ N + NL +R+ I K + + + A E + Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNSDIVNKVVNLAARNAGFINKRFHNKLSSRLAAPELYQQF 421 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TV 447 ++ +++ QE + N +A+ +++ L +RY D Q PW + K DR + Sbjct: 422 IAAANKIGQEFCQREYN----KAIREIMLLADLANRYIDEQAPWVVAKQE-DREQDLHDI 476 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 477 CSMGINLFRVLMTYLKPILPGLTGR 501 >gi|168229505|ref|ZP_02654563.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472636|ref|ZP_03078620.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194459000|gb|EDX47839.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205335754|gb|EDZ22518.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 677 Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 131/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ T A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLATELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADIANRYVDEQAPWVVAKQEDRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503 >gi|296103770|ref|YP_003613916.1| methionyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058229|gb|ADF62967.1| methionyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 677 Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 131/505 (25%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ + + + S+ + DISYD++ T + + + +++ ++ + G I Sbjct: 66 LGVSPEQMIAEMSQEHQTDFAGFDISYDNYHSTHSEENRELSTLIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160 S Y ++ + D KG + + A ++P + + Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYA 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVLSAELA----DPE 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAAAVGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P+LA + Sbjct: 478 CTMGLNMFRVLMTWLKPVLPQLAAR 502 >gi|89092515|ref|ZP_01165468.1| methionyl-tRNA synthetase [Oceanospirillum sp. MED92] gi|89083027|gb|EAR62246.1| methionyl-tRNA synthetase [Oceanospirillum sp. MED92] Length = 679 Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 143/545 (26%), Positives = 251/545 (46%), Gaps = 60/545 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ RF + G + D HG I A Sbjct: 7 KILVTSALPYANGPIHLGHLVEYIQTDIWVRFQKQRGHQCTYVCADDAHGTPIMLKADQM 66 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + +D+ S+ RD + + + +D++ T + + +++ + D G I K Sbjct: 67 GISPQELIDKVSQEHQRDFSGFM-VGFDNYYSTHSEENQHFASLIYTALRDGGHIAKKTI 125 Query: 125 SGWYSLRDEAYYND----DEVYKGADGQYYN-------AQHNPVQWM------------- 160 + Y E + D E K + Y A ++PV+ Sbjct: 126 TQAYDPEKEMFLPDRFVKGECPKCGEPDQYGDSCEKCGATYSPVELKNAYSAVSGAKPIE 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E YFF+L ++ L ++ ++H + + I + NE + ++GL++ +SR WG + Sbjct: 186 KESEHYFFKLGDFEGFLRNWVDNHVQEQM-IHKLNE---WFEAGLQNWDISRDAPYWGFE 241 Query: 220 IPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWP----ADL-HVIGKDILRFHAI 273 IPD P YVW+DA Y+ + + D + ++W A+L H IGKDI FH + Sbjct: 242 IPDAPGKYFYVWLDAPIGYMASFKNWCDKNGANFDEYWSESSNAELYHFIGKDIAYFHTL 301 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L A P VF HGF+ G+K+SKS G I + + + LRY+ ++ Sbjct: 302 FWPAMLEGAGFRKPNGVFCHGFLTVDGQKMSKSRGTFIMAETYLNHLRPEYLRYYFAAKL 361 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDE 388 + G D + + + RVNADL N + N+ SR I K +DG + + P +TE+ Sbjct: 362 SSGIDDIDLNLEDFRMRVNADLVNKVINIASRCAGFIKKKFDGELASQLVEPELYTEAVA 421 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446 + S+ S +N+ +A+ +++++ + ++Y DA +PW L K Sbjct: 422 AGESIASA--------YENREYGKAMREIMAIADKANQYIDAAEPWVLAKQEGKEQEVQD 473 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--TFD 504 + + + R + L +PK+A F+A ++ + S+ Q L + HK F Sbjct: 474 CCTMGINLFRVILTYLAPVLPKVAEDA--QAFLAVDDLAWNSIQQPL----LSHKINKFK 527 Query: 505 PIFPR 509 P+ R Sbjct: 528 PLMQR 532 >gi|315126748|ref|YP_004068751.1| methionyl-tRNA synthetase [Pseudoalteromonas sp. SM9913] gi|315015262|gb|ADT68600.1| methionyl-tRNA synthetase [Pseudoalteromonas sp. SM9913] Length = 674 Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 136/505 (26%), Positives = 231/505 (45%), Gaps = 43/505 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ I++A+ Y N H+GH E I D+ +RF +L G + + D HG I AQ Sbjct: 3 QRKILITSALPYANGPTHLGHLLEYIQTDIWSRFQKLQGHEAYYVCADDAHGTPIMLNAQ 62 Query: 64 NAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+T + V S RD AD +I +D++ T + + + +++ +++D G I K Sbjct: 63 KQGITPEEMVKNVSIERQRDFAD-FNIKFDNYHSTHSQENKEFSELIYNRLNDAGHIKKH 121 Query: 123 CYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM----------- 160 S + + D E G A ++P + + Sbjct: 122 TISQLFDPEKGIFLPDRFVTGTCPTCKSEDQNGDSCDACGATYSPTELINPRSVMSGAEP 181 Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + E YFF L A++D L + S + E N++ + GL+ +SR +G Sbjct: 182 ILKDSEHYFFDLPAFEDMLKEWLHSG---TIQQEMANKLDEWFADGLQQWDISRDAPYFG 238 Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFH 271 +IP+ P YVW+DA Y+ + L + G FW A+L H IGKDI+ FH Sbjct: 239 FEIPNAPGKYFYVWLDAPIGYMASFKNLCDKQGIDFDAFWQEGSDAELYHFIGKDIIYFH 298 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L A P VF+HGF+ G K+SKS G I ++ + + LRY+ Sbjct: 299 SLFWPAMLEGAQFRKPTNVFAHGFVTVNGAKMSKSKGTFIKARTYLDNLDPEFLRYYYAA 358 Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ G D + + +RVN+DL + N+ SR I K +DG + T + Sbjct: 359 KLNSGITDLDLNLEDFAQRVNSDLVGKVVNIASRCAGFITKKFDGKLSN----TVMQPQL 414 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVL 448 L+ I E +N+ RA+ ++++L + +++ D PW L K + + A V Sbjct: 415 LAEFQNASATITEYYENREYSRAIREIMALADKANQFIDNAAPWVLIKDESKQEEAHQVC 474 Query: 449 YVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P +A+ + Sbjct: 475 SLGLNLFRVLITYLKPVLPGMASNV 499 >gi|238912598|ref|ZP_04656435.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 677 Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 131/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ T A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLATELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503 >gi|170767164|ref|ZP_02901617.1| methionyl tRNA synthetase [Escherichia albertii TW07627] gi|170123498|gb|EDS92429.1| methionyl tRNA synthetase [Escherichia albertii TW07627] Length = 677 Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 134/505 (26%), Positives = 232/505 (45%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161 S Y ++ + D KG A QY A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR I K +DG++ A +D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRCAGFINKRFDGVL----AGELADPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 478 CSMGINLFRVLMTYLKPVLPNLTER 502 >gi|238583385|ref|XP_002390224.1| hypothetical protein MPER_10534 [Moniliophthora perniciosa FA553] gi|215453394|gb|EEB91154.1| hypothetical protein MPER_10534 [Moniliophthora perniciosa FA553] Length = 282 Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 104/251 (41%), Positives = 148/251 (58%), Gaps = 14/251 (5%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD--GLDVLFTTGTDEHGQKIAK 60 E + Y +T I YPNA PHIGH Y ++ ADV AR+ RL G+ V F TGTDEHG KI K Sbjct: 22 EVKPWYTTTPIFYPNAVPHIGHLYSLVTADVFARYQRLKNPGIPVRFVTGTDEHGLKIQK 81 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA G+ K F DQ S FR ++ V D++Y F+RT+++ H+ + + +W+++ +G IY Sbjct: 82 AATAKGMQPKEFCDQTSEKFRRLSSVADVTYTTFVRTSDEVHYKSVQQIWRELDAQGLIY 141 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQY----YNAQHN-PVQWMEEE---GYFFRLSAY 172 KG YSGWYS+ DE +Y D ++ + Y Y+ Q N W + F L + Sbjct: 142 KGSYSGWYSVTDECFYTDSQITRSPGNTYLSVTYDIQRNRRYCWNTAQRPTTCFASLPSE 201 Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKS-GLKDLSLS--RKTFDWGIKIPDDPQYIMY 229 +D LL +Y S I P R VI +++ L+D+S+S R WGI +P DP + +Y Sbjct: 202 KD-LLEHYRSDENSIFPQSYRLNVIRTLETETLEDISISRPRSRLTWGIPVPGDPDHTVY 260 Query: 230 VWIDALTNYLT 240 VW+DAL +YLT Sbjct: 261 VWVDALISYLT 271 >gi|119715622|ref|YP_922587.1| methionyl-tRNA synthetase [Nocardioides sp. JS614] gi|187647738|sp|A1SGG5|SYM_NOCSJ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|119536283|gb|ABL80900.1| methionyl-tRNA synthetase [Nocardioides sp. JS614] Length = 595 Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 145/523 (27%), Positives = 244/523 (46%), Gaps = 65/523 (12%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + +A+A+P N HIGH + +DV +R+ R+ G DVL +G+DEHG I AA A Sbjct: 4 VLSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGSDEHGTPILIAADEA 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G++ + D+N R + L ++YD + RTT + HH + L+ + + G + Sbjct: 64 GLSPQELADRNHRIIAEDLASLGLTYDLYTRTTTRNHHAVVQELFLGVYENGYFVEQTTY 123 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QWM 160 G S D + Y GA G + N + +++ Sbjct: 124 GAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPHDLIDPRSKINGETPEFI 183 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218 E + +F L A + L + + L R VI F ++ LK++ T DWGI Sbjct: 184 ETQHFFLDLPALAEALGEWLDGREATGL---WRPNVIRFSQNILKEIRPRAMTRDIDWGI 240 Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD-----LHVIG 264 +P ++P +YVW DA+ YL+ + LD PD + + W D + +G Sbjct: 241 AVPLDGWRENPTKRLYVWFDAVIGYLSASIEWARRLDEPD--RWRDWWNDPDALSYYFMG 298 Query: 265 KDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNV 310 KD + FH+ WPA LL+ L LP +V S F+ +G K S S V Sbjct: 299 KDNITFHSQIWPAELLAYSGKGAKGGTPRQYGELNLPTEVVSSEFLTMEGRKFSSSKRVV 358 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 I +++ DA RYF+ +D + +R N +L G GNLV+R+ ++I Sbjct: 359 IYVRDLLSRYQPDAFRYFVAAAGPENQDSDFTWSEFVRRTNDELVAGWGNLVNRTANLIA 418 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 K++ G IP G T +D+++L + + + + +A+ + + V+EV++Y Sbjct: 419 KNF-GEIPKAGELTAADQALLDSVASAFGVVGDLIGRHRQKQAIGEAMRAVAEVNKYVSD 477 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +PW++K +PDR T+L+V + + L ++L F+P AN++ Sbjct: 478 TEPWKIKD-DPDRLGTILHVVAQCVADLNLILSPFLPFAANEV 519 >gi|74312632|ref|YP_311051.1| methionyl-tRNA synthetase [Shigella sonnei Ss046] gi|123745978|sp|Q3Z096|SYM_SHISS RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|73856109|gb|AAZ88816.1| methionine tRNA synthetase [Shigella sonnei Ss046] gi|323168762|gb|EFZ54442.1| methionyl-tRNA synthetase [Shigella sonnei 53G] Length = 677 Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 131/505 (25%), Positives = 232/505 (45%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRSDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|323144943|ref|ZP_08079504.1| methionine--tRNA ligase [Succinatimonas hippei YIT 12066] gi|322415282|gb|EFY06055.1| methionine--tRNA ligase [Succinatimonas hippei YIT 12066] Length = 674 Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 139/505 (27%), Positives = 227/505 (44%), Gaps = 41/505 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + +++A+ Y N H+GH E I +D+ RF R G +V + D HG + A G Sbjct: 1 MLVTSALPYANGPIHLGHMLEHIQSDIFVRFQRAVGNNVYYVCADDCHGTPVMIKAGQMG 60 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + + Q + + D I+YD++ RT + + + ++KK+ DKG I S Sbjct: 61 ITPEELILQVGKEHKQDFDDFLINYDNYYRTHSEENRIFSQSIYKKLRDKGFITTKTISQ 120 Query: 127 WYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQ--------------WME 161 Y + D V GA QY +A +NP E Sbjct: 121 LYDPEKNMFLPDRFVKGTCPKCGAPDQYGDNCEVCSATYNPTDLKNPYSTISGATPVLKE 180 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 YFF L ++D L Y S +LP E N++ + GLKD +SR +G +IP Sbjct: 181 SLHYFFDLPKFKDFLHDYINSG---VLPKEMANKLEEWFAQGLKDWDISRDAPYFGFEIP 237 Query: 222 DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYW 275 D YVW+DA Y+ + + D FW D H IGKDIL FH+++W Sbjct: 238 DAENKYFYVWLDAPIGYMASFKNFCDKNGIDFDAFWNKDSDKELYHFIGKDILYFHSLFW 297 Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 PA L ++ LP +F HG++ G K+SKS G I ++ + + LRY+ ++ Sbjct: 298 PATLKGSDHRLPTGIFVHGYVTVNGAKMSKSKGTFIKASTYLKHLKPECLRYYFASKMNN 357 Query: 336 -GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 D D +VN+D+ + NL SR+ I K ++GM+ A +D +++ Sbjct: 358 QAVDLDLALDDFVAKVNSDIVGKVVNLASRTAGFINKRFNGML----ADKPNDPALMEKF 413 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTV 452 + + EI++ + A+ ++SL E +RY DA PW + K ++ V + Sbjct: 414 AAAMPEIKQAYDCRNYSDAVRAIMSLADEANRYIDAMAPWVIAKQEGQDEKLQAVCTDGI 473 Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477 + L L +P++ K ++L Sbjct: 474 NCFKALITYLSPILPEVYLKAKELL 498 >gi|170289693|ref|YP_001736509.1| methionyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8] gi|229558153|sp|B1L7J9|SYM_KORCO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|170173773|gb|ACB06826.1| methionyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8] Length = 559 Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 140/513 (27%), Positives = 244/513 (47%), Gaps = 46/513 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 +++A Y NA PH+G +++ +DV ARF R G +V+F +G+DEHG I A G+ Sbjct: 5 VASAWPYINAVPHLGTLVQVLSSDVFARFLRKMGEEVVFVSGSDEHGTPIEIEAIRKGIA 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D+ + + ISYD++ RT H + R + K+ ++G I++ Y Sbjct: 65 PRDLTDKMHAYITWLFESFGISYDNYTRTESDVHKEFVRDFYLKVYNEGHIFERETEQLY 124 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQH-----------NPVQWMEEEG------------- 164 +DE + D V Y H NP ++ + Sbjct: 125 CPKDEMFLPDRFVTGTCPYCGYERAHGDQCDRCGRLLNPTDLIDPKCSICGSVPEMRRTK 184 Query: 165 -YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI--KIP 221 +FF L + ++L Y E + LP + +S ++ GL+ SL+R WGI P Sbjct: 185 HWFFDLPKFSERLRKYIEENEN--LPENAKTLSLSMIEEGLRPRSLTRDN-KWGIPAPFP 241 Query: 222 DDPQYIMYVWIDALTNYLTTTG--YLDNPDGSK-AKFWPA----DLHVIGKDILRFHAIY 274 +YVW++A+ Y++ +L + + +FW + ++ IGKD + FH I Sbjct: 242 GSEGKTIYVWMEAVLGYVSAVKEYFLKRGEAERFEEFWKSGDTRSVYFIGKDNIPFHTII 301 Query: 275 WPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 +PA L+++ LP V S F+L++GEK SKS I E ++ + D R++++ Sbjct: 302 FPALLMASGEGYALPFSVASTEFLLYEGEKFSKSERRGIWMDEALQLLPADYWRFYMIYM 361 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 KD + + + +VN +L + IGNLV R +S I Y G IP+ E DE Sbjct: 362 RPELKDASFSWEDFESKVNDELNDTIGNLVHRILSFIASRYSGQIPS----VELDEEASG 417 Query: 393 VCSRVLQ---EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 RV + EI EN+ + AL +I + +++F+ ++PW+ ++N RA + + Sbjct: 418 FLMRVREIGREIEENLMKIKLRDALRSLIEMARLGNKFFNNREPWKDFESNRGRADSTIL 477 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + +++ LA + F+P A K++ +L + E Sbjct: 478 ASYILLKILAFYMHIFMPSSAEKLWKMLGLEGE 510 >gi|289192151|ref|YP_003458092.1| methionyl-tRNA synthetase [Methanocaldococcus sp. FS406-22] gi|288938601|gb|ADC69356.1| methionyl-tRNA synthetase [Methanocaldococcus sp. FS406-22] Length = 650 Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 133/500 (26%), Positives = 244/500 (48%), Gaps = 41/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I+TA+AY N H+GHA I AD++ ++ +L G DV+ GTD HG I A+ G Sbjct: 5 ITTALAYTNGPLHLGHARSTYIPADIMYKYLKLKGEDVIHVGGTDNHGVPITLTAEKEGK 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + V++ ++ D+L I +D F +T + H +T + + K+ + G IY+ + Sbjct: 65 SPEEIVEKYHNEIKEDLDLLGIEFDAFGKTHSQIHIETAQEFYLKLKENGYIYEKEIEQF 124 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQ-----------HNPV--------QWMEEE 163 Y + + + D V Y G + + + + NP + + + Sbjct: 125 YCPKCKKFLPDRYVEGICPYCGGEARGDHCEVCGRHLEPFELKNPYCVICKGKPEIRKTK 184 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 YFF+LSA + +L Y ++ E +P +N ++++K L D +SR WG+ IP Sbjct: 185 HYFFKLSALKKELEEYIKNAEE--MPEHVKNMALNWIKE-LHDWDISR-DISWGVPIPGT 240 Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFL 279 Q +MYVW++A Y++ T L + K+W H IGKDI HA++WP L Sbjct: 241 NQ-VMYVWLEAPIGYISFTKMLGD---VWKKYWLEKDTKIYHFIGKDITVHHAVFWPGML 296 Query: 280 LS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 ++ + LP V S G++ +G K+S S V+ + ++ D LRY+L+ KD Sbjct: 297 IAHGSFNLPTAVVSGGYLTLEGRKMSTSKKWVVWVKDFVKNFDADYLRYYLIMSAPLFKD 356 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRV 397 + D K ++N +L N IGN R ++ + + + I + D+++L C Sbjct: 357 CDFSFDDFKNKINNELINIIGNFTHRVLTFTHRKFKKVPIVDENRLKDEDKALLKKCEET 416 Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 ++ + +N+++ AL ++ L E + YF +PW + + R +LY + ++ Sbjct: 417 IEAVDKNIRSFKFRDALVNILHLAIEGNSYFQKMEPWAV--NDEKRLEEILYTCCKAVKT 474 Query: 458 LAILLQAFVPKLANKIFDIL 477 + LL ++PK + ++ +++ Sbjct: 475 IIYLLYPYMPKKSLELLNLM 494 >gi|254168303|ref|ZP_04875149.1| methionyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|197622812|gb|EDY35381.1| methionyl-tRNA synthetase [Aciduliprofundum boonei T469] Length = 750 Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 137/522 (26%), Positives = 255/522 (48%), Gaps = 52/522 (9%) Query: 6 KLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++I A Y N H+GH AY + AD+ AR+ R+ G +VL +G+DEHG I A Sbjct: 18 RIFIGVAWPYANGPIHLGHIVGAY--LPADIFARYQRMQGNEVLMVSGSDEHGTPITITA 75 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + G + + D+ + ++ + L IS+D + RT+ H + + ++ + G +YK Sbjct: 76 EKEGKSPQEIADRYHKINSEVMEKLGISFDLYFRTSHPNHEKIVKDFFLRLWENGYLYKK 135 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH----------------NPV 157 Y + + + D V Y+ A G Q N P Sbjct: 136 KMLLPYCPQCKRFLPDRYVVGTCPYCGYENAHGDQCDNCGRMLDPKDLINPRCVICGTPT 195 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI----SFVKSGLKDLSLSRKT 213 ++ E E FF LS + +L + E + R+ VI +FVK GLKD +++R Sbjct: 196 EFRETEHIFFALSKLEGTILKWLEDKTYW------RDNVIKFTRNFVKGGLKDRAITR-D 248 Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD----LHVIGKD 266 +WG+++P + +YVW DA+ YL+ + + + FW + + +GKD Sbjct: 249 LEWGVEVPLEGFENKRIYVWFDAVIGYLSASIEWAKRNNKDWEVFWKDENTRHYYFLGKD 308 Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 + FH I WPA L++ L LP V ++ ++ GEK SKS G + E++E D + Sbjct: 309 NIPFHTIIWPAMLMAHEGLNLPYNVVANEYLRFSGEKFSKSRGIGVWMPELLENFHPDII 368 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 R++ + +D + D ++VN +L + N V R++ +++ G +P G E Sbjct: 369 RFYGTVNMPESRDSDFTWDDFVQKVNEELIDKFANFVHRALIFAYRNF-GEVPPRGDIDE 427 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 D + + + ++++ E M++ + +A + ++L + YFD + PW L K + ++ + Sbjct: 428 VDREAIKLIMQTMKKMNEYMESVELKKAFKEWLNLARYGNVYFDRKAPWALCKEDREKCA 487 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487 T + +++++++ LAIL F+P + +I+ F+ +E+ FQ Sbjct: 488 TAINISLQIVQALAILGAPFLPFTSERIWK--FLGNEDSIFQ 527 >gi|227538486|ref|ZP_03968535.1| methionine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300] gi|227241672|gb|EEI91687.1| methionine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300] Length = 689 Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 143/540 (26%), Positives = 259/540 (47%), Gaps = 42/540 (7%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 + ++++ I++A+ Y N HIGH A I D+ R+ RL+ DV++ G+DEHG I Sbjct: 3 ITDKKRYTITSALPYANGPLHIGHLAGAYIPGDIFVRYLRLNQKDVVYVCGSDEHGAAIT 62 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +D+ ++ ++ + IS+D + RT+E HH + + + KG+ Sbjct: 63 IKAKKEGITPREIIDKYNQQIKESFEEFGISFDIYHRTSEPIHHQLSQEFFLNLYHKGEF 122 Query: 120 YKGCYSGWYSLRDEAYYND-----------------DEVYKGADGQYYNAQHNPVQWM-- 160 + +Y + D D+ K NP+ + Sbjct: 123 IERFSEQYYDEEFHQFLADRYIVGTCPNCHSEGAYGDQCEKCGTSLSPTDLINPISTLSG 182 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + ++ L YQ L + + L + +S++KSGL+ S++R Sbjct: 183 KTPVLKETKHWYLPLDKYQPWLEKWLIEGKKDELKSNVYGQCLSWLKSGLQPRSMTRD-L 241 Query: 215 DWGIKIP--DDPQYIMYVWIDALTNYLTTTGY--LDN----PDGSKAKFWPAD----LHV 262 DWG+ +P + +YVW+DA Y++ T LDN D K + P D +H Sbjct: 242 DWGVDVPLEEAEGKKLYVWLDAPIGYISATKQWALDNGKNWEDYWKEQPDPEDNSCLIHF 301 Query: 263 IGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV- 320 IGKD + FH I +PA L + + LP+ + ++ F+ +G+K+S S + + E +EE Sbjct: 302 IGKDNIVFHCIIFPAILHAHGDYILPENIPANEFLNLEGDKLSTSRNHAVWLHEYLEEFP 361 Query: 321 -GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 D LRY L + D + + R+N +L +GN ++R + + K +DG I + Sbjct: 362 GKQDELRYVLTSILPETSDSEFTWKDFQARINNELVAILGNFINRVMVLSHKYFDGKILS 421 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 E D+ + + + ++I +++ ALAQ +++ ++Y +PW++ KT Sbjct: 422 GSDLQEEDQQVFAELKKYPEQITQSINQYRFREALAQFMNVARLGNKYLADAEPWKVIKT 481 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499 + +R TVL V++++ LAIL Q F+PK A K+F++L + ++ + LK G L Sbjct: 482 DEERVKTVLNVSLQIAANLAILAQPFLPKTATKLFEMLNLPQQDWKGAGQEDLLKDGHEL 541 >gi|220931388|ref|YP_002508296.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168] gi|254782868|sp|B8D274|SYM_HALOH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|219992698|gb|ACL69301.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168] Length = 540 Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 136/506 (26%), Positives = 242/506 (47%), Gaps = 46/506 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR+ RL G VL+ +G+D HG IA A+ G Sbjct: 3 VFIGGAWPYANGSLHLGHIASLLPGDILARYFRLKGEKVLYVSGSDCHGTPIALRAKREG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + ++ ++ + F+ L SYD++ +T HH + + KK+ +KG IYK Sbjct: 63 ESPRIIAERYHQEFKKTFTKLGFSYDNYTKTDNPFHHQVVQSIIKKLFEKGYIYKKQTKQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + + + D +V +G Y ++ P E+ Sbjct: 123 LYCSKCQQFLPDRYVEGICPVCGKVVRGDQCDYCSSLIEPTDLEEKRCKICGSSPVIKNT 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV---ISFVKSGLKDLSLSRKTFDWGIK 219 E ++ LS + D+L +++ + R N + +++ GL+D +++R +WG+ Sbjct: 183 EHFYLALSEFSDELKRLLDNNRGW-----RDNAIKLSTRYIEEGLQDRAITR-DLNWGVS 236 Query: 220 IPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADL---HVIGKDILRFHAI 273 IP + + +YVWIDA+ YL+ + G FW D +V GKD + FH + Sbjct: 237 IPFEGYEEKRIYVWIDAVLGYLSASKEWSRHTGEPWQNFWSEDTKTYYVHGKDNIPFHTL 296 Query: 274 YWPAFLLSANLP-LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 PA L A + +P+K+ S ++ +G+K+S S + ++++ D++RYFL+ Sbjct: 297 ILPALLRGAGIKQIPEKIVSSEYLTIEGKKLSTSRNWAVWLPDMLKNYQPDSIRYFLIIN 356 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 KD + + N +L GN V+R++ I K Y+G+IP + E I + Sbjct: 357 GPEKKDSNFSWEEFIHSHNGELLGAYGNFVNRTLVFIEKYYNGLIPDGKLNEKIKEKIET 416 Query: 393 VCSRVLQEI-RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451 + RV +I + N++N AL + + V E ++YFD+++PW K + +Y Sbjct: 417 LYHRVGNKIEKTNLKN-----ALEVIFNFVREANKYFDSEEPWITVKEDKGTCKDTIYTC 471 Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477 V++I L LL F+P + K+ L Sbjct: 472 VQIIANLTNLLSPFLPFSSKKVRGFL 497 >gi|331663606|ref|ZP_08364516.1| methionine--tRNA ligase [Escherichia coli TA143] gi|331059405|gb|EGI31382.1| methionine--tRNA ligase [Escherichia coli TA143] Length = 680 Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 131/505 (25%), Positives = 232/505 (45%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 69 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + F W D H IGKDI+ F Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRSDSVSFDEYWKKDSTAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505 >gi|300123023|emb|CBK24030.2| Methionyl-tRNA synthetase [Blastocystis hominis] Length = 358 Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 107/317 (33%), Positives = 166/317 (52%), Gaps = 21/317 (6%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 +ST I Y N +PH+GH Y +AD + R+ ++ G TTGTDEHGQK+ K A+ + Sbjct: 32 VSTPIYYVNGEPHLGHIYSTALADAICRWEQMKGKSTFLTTGTDEHGQKVQKEAEKKHME 91 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 K + D + F+ D+ FIRTT+ H D +W ++ GD+Y+ Y G+Y Sbjct: 92 VKNYCDSIASVFQSELSHYDLQLGRFIRTTDPDHVDLVHQVWNELQRNGDLYEASYRGYY 151 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR------LSAYQDKLLSYYES 182 DEA+ + ++Y+ ++ NPV+ +EE + FR + S S Sbjct: 152 CRSDEAFLTESQIYEENGQKFSKESRNPVELVEERNWMFRRLYWRFCAPIATGWSSARSS 211 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 H + I+P N +I ++ +DLS+SR W I + D + +YVWIDALTNYLT Sbjct: 212 HAQ-IVPSSCFNSMIRTIEESAQDLSVSRPLSRVPWAIDV--DGRDGVYVWIDALTNYLT 268 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 T S+ + + + LHV GKDI +FH ++P LL+ + LP ++ H G Sbjct: 269 T---------SETRSFDSVLHVFGKDIAKFHCYFYPCLLLALHRKLPDRMICHSHWTVNG 319 Query: 301 EKISKSLGNVIDPIEVI 317 K+SKS GN + P++ + Sbjct: 320 TKMSKSKGNYV-PLQAL 335 >gi|77164486|ref|YP_343011.1| methionyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707] gi|254433423|ref|ZP_05046931.1| methionyl-tRNA synthetase [Nitrosococcus oceani AFC27] gi|123594665|sp|Q3JCG5|SYM_NITOC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|76882800|gb|ABA57481.1| methionyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707] gi|207089756|gb|EDZ67027.1| methionyl-tRNA synthetase [Nitrosococcus oceani AFC27] Length = 674 Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 139/507 (27%), Positives = 232/507 (45%), Gaps = 53/507 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N H+GH E I D+ RF R+ G + + D HG I AQ Sbjct: 4 RILVTSALPYANGPIHLGHLVEYIQTDIWVRFQRMRGHECYYVCADDAHGTPIMLRAQQE 63 Query: 66 GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI----- 119 GVT + +DQ S+ + D AD IS+D + T + ++ + DKG I Sbjct: 64 GVTPETLIDQCSQEHQADFAD-FAISFDSYHSTHSAENRTLSETIYLRNRDKGHITTRIV 122 Query: 120 ------YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW-------------- 159 KG + +R D G + + A ++P + Sbjct: 123 RQAYDPVKGMFLPDRFIRGTCPRCDALDQYGDNCEVCGATYSPTELKEAISVLSGTPPIE 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E YFF+L+ ++ L + + L E N++ + ++GL+D +SR +G Sbjct: 183 RESEHYFFKLNDFEPLLKRWTQGGH---LQPEMANKLNEWFEAGLQDWDISRDAPYFGFP 239 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG----------SKAKFWPADLHVIGKDILR 269 IP+ YVW+DA YL + +L + +G S A+ + H IGKDIL Sbjct: 240 IPESTDKYFYVWLDAPIGYLASFKHLCDREGLDFDSFMTPHSTAELY----HFIGKDILY 295 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FHA++WPA L A LP +F+HGF+ G+K+SKS G I ++ + + LRY+ Sbjct: 296 FHALFWPAMLHGAGFRLPTAIFAHGFLTVNGQKMSKSRGTFIKARTYLKHLNPEYLRYYF 355 Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 ++ G +D + D RVNADL + N+ SR I K + + A ++ Sbjct: 356 AAKLGSGIEDLDLNFDDFMSRVNADLVGKVINIASRCAGFINKHFQNRL----ADRLVEK 411 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 S+ + + ++ + + A+ ++++L + +RY D Q+PW K +P+R V Sbjct: 412 SLFQKFVAASEHLAQHYEAREFGHAMREIMALADQANRYIDEQQPWVAIK-DPERKQEVQ 470 Query: 449 YVT---VEVIRQLAILLQAFVPKLANK 472 V + + RQL I L+ +P K Sbjct: 471 EVCTLGLNLFRQLMIYLKPVLPMTTEK 497 >gi|159905012|ref|YP_001548674.1| methionyl-tRNA synthetase [Methanococcus maripaludis C6] gi|159886505|gb|ABX01442.1| methionyl-tRNA synthetase [Methanococcus maripaludis C6] Length = 663 Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 141/500 (28%), Positives = 225/500 (45%), Gaps = 50/500 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K ++TA+AY N H+GHA I AD+ R+ RL G +V+ GTD HG I A+ Sbjct: 2 KHLVTTALAYTNGPLHLGHARSTYIPADIYTRYLRLKGEEVVHVGGTDNHGVPITLTAER 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV VD+ + D L++S+D F RT H T + + K+ + G IY+ Sbjct: 62 EGVKPIDIVDRYHNAIKADLDSLNVSFDTFGRTHSDIHIKTAQEFYSKLKENGYIYEKEI 121 Query: 125 SGWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWM-------------- 160 +Y + + Y D V +G + P + + Sbjct: 122 EQFYCEKCDMYLADRYVEGICPFCEGEARGDHCEVCGRHLEPTELVNPYCIHCNSKPEIK 181 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 YFF+LSA QD L Y E+ PE +P +N + +++ L D +SR WG+ I Sbjct: 182 RTTHYFFKLSAMQDVLKEYIENSPE--MPEHVKNMALRWIEE-LHDWDVSR-NIKWGVPI 237 Query: 221 PDDPQYIMYVWIDALTNYLTTTG---------YLDNPDGSKAKFWPADLHVIGKDILRFH 271 P +MYVWI+A Y++ T +L+N D SK H IGKDI H Sbjct: 238 PGCDDQVMYVWIEAPIGYVSFTKQLGDVWKSYWLENTDNSKIS------HFIGKDITVHH 291 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 A++WP L +P V S G++ + +K+S S V+ + IE D LRYF + Sbjct: 292 AVFWPGILKGIGGYKMPNAVVSGGYLTLENKKMSTSKNWVVWVKDFIENFSSDYLRYFFM 351 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDE 388 +D + D +KR+N +L + IGN R++ + + G P + D+ Sbjct: 352 INAPLNRDTDFSWDDFQKRINTELIDIIGNFTHRTLVFTERKF-GSTPVVDLNQLKDEDK 410 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 ++S C + ++ AL ++I L + + YF PW +K + +R V+ Sbjct: 411 KLISKCEDTSNRVDSLIREYNFKDALMEIILLAKDGNAYFQGMAPWAIK--DEERLKEVM 468 Query: 449 YVTVEVIRQLAILLQAFVPK 468 Y ++ + LL +F+P+ Sbjct: 469 YTCSVALKYIIYLLSSFMPE 488 >gi|145593338|ref|YP_001157635.1| methionyl-tRNA synthetase [Salinispora tropica CNB-440] gi|187647767|sp|A4X307|SYM_SALTO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|145302675|gb|ABP53257.1| methionyl-tRNA synthetase [Salinispora tropica CNB-440] Length = 603 Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 155/532 (29%), Positives = 238/532 (44%), Gaps = 68/532 (12%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ A+A+P N HIGH + +DV AR+ R+ G DVL +GTDEHG I A Sbjct: 6 HVLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMAGHDVLMVSGTDEHGTPIQVQADA 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GVT + D+ +R L ++YD F RTT H+ + L++ + G I Sbjct: 66 EGVTPRELADRYNRVIVADLHGLGLTYDLFTRTTTGNHYAVVQELFEGMYRNGYIVSKTT 125 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNA---QHNPV--------------QW 159 G S D + Y+ A G ++ Q +P+ ++ Sbjct: 126 MGAISPSTGRTLPDRYIEGTCPICGYESARGDQCDSCGNQLDPIDLRNPKSKINGETPKF 185 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WG 217 +E E +F L A L + ++ + R V+ F K+ L DL T D WG Sbjct: 186 VETEHFFLDLPALAGVLGQWLDTREGW------RPNVLRFSKNLLDDLQPRAITRDLEWG 239 Query: 218 IKIPDDP-----QYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPADL--------H 261 + IP D +YVW DA+ YL+ + G ++W AD + Sbjct: 240 VPIPLDGWRERGDKRIYVWFDAVIGYLSASIEWARRSGDPQAWRRWWSADGPGKDAPSHY 299 Query: 262 VIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSL 307 +GKD + FH++ WPA L L LP +V S F+ +G K S S Sbjct: 300 FMGKDNIVFHSVIWPALLAGYSGEGSHDGQPGELGRLNLPTEVVSSEFLTMEGRKFSSSR 359 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 VI + +E DALRYF+ D + +R N +L G GNLV+RS+S Sbjct: 360 RVVIYVRDFLERYDADALRYFIAVAGPESNDTDFTWAEFLRRNNDELVAGWGNLVNRSIS 419 Query: 368 MILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 M K++ + P P TE+DE++L+V + E + +A+ + + +V+E +R Sbjct: 420 MAAKNFGAIPPVDPAGLTEADETLLAVARAGFDTVGELIGRHRQKQAIGEAMKVVAEANR 479 Query: 427 YFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y Q PW+LK + + R TVL+V ++V+ LL F+P A KI +L Sbjct: 480 YLSEQAPWKLKGEADRPRMGTVLHVALQVVSDANTLLTPFLPHSAQKIHQLL 531 >gi|120437425|ref|YP_863111.1| methionyl-tRNA synthetase [Gramella forsetii KT0803] gi|187647722|sp|A0M5Z9|SYM_GRAFK RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|117579575|emb|CAL68044.1| methionyl-tRNA synthetase [Gramella forsetii KT0803] Length = 691 Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 143/518 (27%), Positives = 247/518 (47%), Gaps = 37/518 (7%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K ++ I+ A+ Y N HIGH A + AD+ +RF R+ G DV F G+DEHG I Sbjct: 3 KNPQRFTITAALPYTNGPIHIGHLAGVYVPADIYSRFLRMQGYDVAFVCGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GVT + VD+ + + + I++D++ RT+ K HHDT +KK+ + G Sbjct: 63 KAKKEGVTPQDVVDKYNGIIKKSFEDFGITFDNYSRTSGKTHHDTASAFFKKMYEDGKFI 122 Query: 121 KGCYSGWYSLRDEAYYND------------DEVYKG---ADGQYYNAQH--NPVQWM--- 160 + Y + D +E Y + G NA NP + Sbjct: 123 EESTEQLYDEEAGQFLADRFVTGTCPKCGNEEAYGDQCESCGTSLNATDLINPKSAITGA 182 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 E +F L Y+D L + + +V S++ GL+ +++R D Sbjct: 183 VPTLKETRHWFLPLDQYEDFLKEWILKGHKSDWKSNVYGQVKSWIDDGLRARAVTRD-LD 241 Query: 216 WGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDIL 268 WGI +P + ++YVW DA Y+++T +G + +W + +H IGKD + Sbjct: 242 WGIPVPVEGGDGKVLYVWFDAPIGYISSTKEWAEREGKDWEPYWKDENTKLVHFIGKDNI 301 Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDAL 325 FH I +P L + + LP+ V ++ F+ +G+K+S S + E +EE D L Sbjct: 302 VFHCIIFPVMLKAHGDYILPENVPANEFLNLEGKKLSTSKNWAVWLHEYLEEFPDQQDVL 361 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 RY L KD + + R N +L GN ++R V + K Y+G++P PGA++E Sbjct: 362 RYVLTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKYYNGIVPEPGAYSE 421 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 DE ++ I +++ A ++++L ++Y ++PW+L KT+ +R Sbjct: 422 IDEKTIAELKAYPSVIASSIERYRFREAQGELMNLARLGNKYLADEEPWKLIKTDEERVK 481 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 T++YV +++ L+I+ + F+P + K+ +L DE+ Sbjct: 482 TIMYVALQIASALSIISEPFLPFTSAKLKKMLNHVDES 519 >gi|299531413|ref|ZP_07044821.1| methionyl-tRNA synthetase [Comamonas testosteroni S44] gi|298720576|gb|EFI61525.1| methionyl-tRNA synthetase [Comamonas testosteroni S44] Length = 715 Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 152/524 (29%), Positives = 238/524 (45%), Gaps = 50/524 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL+++TA+ Y N HIGH E I AD R R+ G V F D HG I AA+ A Sbjct: 5 KLFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVNFVGADDAHGAPIMIAAEKA 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T + FV + + D I++D++ T +H+ + ++ + G I Sbjct: 65 GKTPQQFVADIAAGRKQYLDGFHIAFDNWSNTDSAENHELSKQIYLDLKKAGFIETRTIE 124 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161 ++ ++ + D KG A QY + NP + Sbjct: 125 QFFD-PEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCSSVYAPTDLINPFSALSGATPVM 183 Query: 162 --EEGYFFRLSAYQD-KLLSYYESH-----PEFILPIER----RNEVISFVKSGLKDLSL 209 E +FF+LS + + L+ + + PE I+ R GL D + Sbjct: 184 KSSEHFFFKLSDPRAVEFLTEWTQNGKHVQPEVAAKIKEWFGVRTNPDGSTSEGLDDWDI 243 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264 SR +GI+IPD P YVW+DA YL + L N G + AD H IG Sbjct: 244 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKELLNRRGEDYDAYMADPDLEQYHFIG 303 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIE-EVGV 322 KDI+ FH ++WPA L + P ++ HGF+ ++ GEK+SKS G +DP++ + ++ Sbjct: 304 KDIITFHTLFWPAMLKFSGRKTPTRICVHGFMTVNNGEKMSKSRGTGLDPLKYLSLKMNP 363 Query: 323 DALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + LRY+L ++ +D ++ + RVN+DL N+ SR+ I K +DG + G Sbjct: 364 EWLRYYLGAKLNGKNEDIDFNPEDFMLRVNSDLIGKYVNIASRAAGFISKRFDGRL---G 420 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTN 440 +E +++L+ I + + RA +++ L +V+ Y DA KPWEL KK Sbjct: 421 VVSEDGQTLLAALREQQAAIVAAYEGRDSARAAREIMLLCDKVNSYVDANKPWELAKKEG 480 Query: 441 PD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 D R V +E R L I L +P +A ++ L V EN Sbjct: 481 MDARLHDVCTTCIEAFRILTIYLSPILPGVAAEVASFLIVPPEN 524 >gi|306817226|ref|ZP_07450973.1| methionine--tRNA ligase [Mobiluncus mulieris ATCC 35239] gi|304650028|gb|EFM47306.1| methionine--tRNA ligase [Mobiluncus mulieris ATCC 35239] Length = 604 Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 155/524 (29%), Positives = 242/524 (46%), Gaps = 58/524 (11%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +I +A+A+P N HIGH I +DV +R+ R+ G +VL +GTDEHG I A+ Sbjct: 3 HILSAVAWPYANGPRHIGHVAGFGIPSDVFSRYMRMKGHEVLMVSGTDEHGTPILVEAEK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + D+N+R + L +SYD F RTT H+ R +++ + D G + Sbjct: 63 EGLTPRQLADKNNRLIVEDLVQLGLSYDLFTRTTTGNHYQIVRAMFEVVRDNGYMLVQTT 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159 S D + +GA G +A N + ++ Sbjct: 123 RAAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDACGNQLDPTDLVKPRSKINGETPKF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 +E E YF L A + L + + E R VI F K+ LK++ T DWG Sbjct: 183 VETEHYFLDLPALAEALTKWLD---EREATGTWRPNVIKFSKNFLKEIKPRAMTRDIDWG 239 Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW--PADL--HVIGKDIL 268 I IP +D +YVW DA+ YL+ + G K+W P L + +GKD + Sbjct: 240 IPIPGWEDQPKRLYVWFDAVVGYLSASIEWARRSGDPEAWRKWWNSPEALSYYFMGKDNI 299 Query: 269 RFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 FH+ WPA LL N L LP +V S F+ +G+K + S G VI Sbjct: 300 VFHSQIWPAELLGYNGEGSRGGDPGNLGHLNLPTEVVSSEFLTMEGKKFATSKGIVIYVR 359 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374 +++E VDALRYF+ +D + +R N +L GNLV+R+ +MI K + Sbjct: 360 DMLERYQVDALRYFISAAGPENQDADFTWAEFVRRTNGELVAAWGNLVNRTAAMISKRF- 418 Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 G IP G D+ +L + + + ++ AL +V+ LV E +RY +P+ Sbjct: 419 GEIPPAGKLEGIDQELLDMVATGFDTVGGLIEAHHQKAALGEVMRLVGEANRYVAQTEPF 478 Query: 435 ELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +LK ++ +R T+L+V +V+ L ++ F+P N I +L Sbjct: 479 KLKDESQRNRLGTILHVLAQVVTDLNCMMSPFLPTSCNTIDRVL 522 >gi|62128373|gb|AAX66076.1| methionine tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715215|gb|EFZ06786.1| methionine tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|326628382|gb|EGE34725.1| methionine tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 704 Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 33 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 92 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 93 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 152 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 153 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 211 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 212 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 268 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 269 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 328 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 329 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 388 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 389 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 444 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 445 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 504 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 505 CSMGINLFRVLMTYLKPVLPTLSERV 530 >gi|296128709|ref|YP_003635959.1| methionyl-tRNA synthetase [Cellulomonas flavigena DSM 20109] gi|296020524|gb|ADG73760.1| methionyl-tRNA synthetase [Cellulomonas flavigena DSM 20109] Length = 595 Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 152/526 (28%), Positives = 244/526 (46%), Gaps = 66/526 (12%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 I +A+A+P N HIGH I +DV +R+ R+ G DVL +GTDEHG I A Sbjct: 4 ILSAVAWPYANGPRHIGHVAGFGIPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVQADKE 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV+ + D+ +R + L +SYD F RTT + H+ + +++ + G + + Sbjct: 64 GVSAQELADRYNRVIVEDLTQLGLSYDLFTRTTTRNHYAVVQEMFRTVHRNGYMVERTTM 123 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QWM 160 G S D + Y GA G + N + +++ Sbjct: 124 GAVSPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDAIELKNPRSRINGETPRFV 183 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218 E +F L A+ D L + + + R V+ F + L D+ T DWGI Sbjct: 184 ESNHFFLDLPAFVDALGDWLRARDGW------RPNVLKFSLNLLDDVRPRAMTRDIDWGI 237 Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HVIGK 265 +P D+P +YVW DA+ YL+ + +PD + ++W P L + +GK Sbjct: 238 PVPLEGWEDNPSKRLYVWFDAVIGYLSASIEWARRSGDPDAWR-QWWNDPEALSYYFMGK 296 Query: 266 DILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FH+ WPA LL +L LP +V S F+ +G++ S S G VI Sbjct: 297 DNITFHSQIWPAELLGYDGKGARGGEPGAFGSLNLPTEVVSSEFLNVEGKQFSTSRGVVI 356 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 +++ DALRY++ +D + K+R N +L G GNLV+R+ SM+ K Sbjct: 357 LVRDMLARYQPDALRYYISVAGPETQDVDFTWAEFKRRTNDELVAGWGNLVNRTASMVHK 416 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 ++ G IPTPG D + + + + E + +AL + + +V+E +RY Sbjct: 417 NF-GEIPTPGELQPVDVELNAQVAAAFGRVGELVGAHRQRQALQEAMRVVTEANRYVSET 475 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +PW+L KT+ DR +TVL+ T + + L LL F+P A + + L Sbjct: 476 EPWKL-KTDRDRLATVLHTTTQAVSDLNTLLAPFLPHSAQAVHEAL 520 >gi|187649780|sp|A9MKV0|SYM_SALAR RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS Length = 677 Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 231/506 (45%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMRHEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFEEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAAAIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503 >gi|86130965|ref|ZP_01049564.1| Methionyl-tRNA synthetase [Dokdonia donghaensis MED134] gi|85818376|gb|EAQ39536.1| Methionyl-tRNA synthetase [Dokdonia donghaensis MED134] Length = 695 Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 144/519 (27%), Positives = 235/519 (45%), Gaps = 42/519 (8%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ I+ A+ Y N HIGH A + AD+ AR+ R+ G DV F G+DEHG I A+ Sbjct: 6 QRYTITAALPYTNGPIHIGHLAGVYVPADIYARYQRMQGADVAFICGSDEHGVPITIKAK 65 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT + VD+ + + + I++D++ RT+ K HHDT +K + D+G + Sbjct: 66 KEGVTPQDVVDKYNAIIKKSFEDFGITFDNYSRTSAKIHHDTASEFFKNMYDQGKFIEET 125 Query: 124 YSGWYSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWM----------- 160 Y + D +E Y G + HN + Sbjct: 126 NEQLYDAEANQFLADRFVTGTCPKCGYEEAY-GDQCESCGTSHNATDLINPKSAITGAVP 184 Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 E + +F L Y D + + + S++ GL+ +++R DWG Sbjct: 185 TLKETKHWFLPLDQYNDFFKEWIIKGHKKDWKTNVYGQCKSWIDDGLRPRAVTRD-LDWG 243 Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRF 270 I IP + ++YVW DA Y+++T +G + +W + LH IGKD + F Sbjct: 244 IPIPVEGADGKVLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDENTKLLHFIGKDNIVF 303 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327 H + +PA L LP V ++ F+ +G K+S S + E +EE D LRY Sbjct: 304 HCLIFPAMLKGHGEYILPDNVPANEFLNLEGRKLSTSKNWAVWLHEYLEEFPDQQDVLRY 363 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L KD + + R N++L GN ++R + K YDG IP PGAF D Sbjct: 364 VLTANAPESKDNDFTWKDFQTRNNSELVAIFGNFINRVTVLTHKYYDGAIPEPGAFNALD 423 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 +L I +++ + + ++L ++Y ++PW+ KT+ +R TV Sbjct: 424 TEVLDAIKAYPAVIGSSIEKYRFRESQTEFMNLARLGNKYLADEEPWKTIKTDVERTKTV 483 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFV---ADEN 483 +YV +++ L++L + +P + K+ DIL V ADEN Sbjct: 484 MYVALQIAAALSVLSEPLLPHTSGKLKDILNVNSSADEN 522 >gi|311278894|ref|YP_003941125.1| methionyl-tRNA synthetase [Enterobacter cloacae SCF1] gi|308748089|gb|ADO47841.1| methionyl-tRNA synthetase [Enterobacter cloacae SCF1] Length = 677 Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 131/505 (25%), Positives = 232/505 (45%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHQVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + DISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIAEMSQEHQADFAGFDISYDNYHSTHSDENRELSELIYGRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160 S Y ++ + D KG + + A ++P + + Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L ++ + L ++ S L + N++ + + GL+ +SR +G Sbjct: 185 MRESEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFEHGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDVTSFDEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L + P +F HG++ G K+SKS G I + + D+LRY+ Sbjct: 302 HSLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHLDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D + Sbjct: 362 AKLSSRIDDIDLNLEDFIQRVNADIVNKVVNLASRNAGFIAKRFDGVL----AAELADPA 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYQTFTDAAGAIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P+LA + Sbjct: 478 CSMGINLFRVLMTYLKPVLPQLAER 502 >gi|238753408|ref|ZP_04614771.1| Methionyl-tRNA synthetase [Yersinia ruckeri ATCC 29473] gi|238708361|gb|EEQ00716.1| Methionyl-tRNA synthetase [Yersinia ruckeri ATCC 29473] Length = 675 Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 136/504 (26%), Positives = 230/504 (45%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +KL ++ A+ Y N H+GH E I AD+ RF R+ G +V F D HG I AQ Sbjct: 6 KKLLVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNEVHFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV + + + S+ + ISYD++ T + + +++ ++ + G I Sbjct: 66 LGVEPEQMIAEMSQEHQQDFAGFGISYDNYHSTHSDENRELSSLIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160 S Y ++ + D KG A QY A ++P + + Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAADQYGDNCEVCGATYSPTELIDPKSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A+ + L ++ S L + N++ + SGL+ +SR +G Sbjct: 185 MRESEHFFFDLPAFSEMLQAWTRSG---ALQEQVANKMQEWFDSGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271 ++PD P YVW+DA Y+ + L + G +FW D H IGKDI+ FH Sbjct: 242 EVPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLDFDEFWREDSTTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L ++ P +F HG++ G K+SKS G I ++ + D LRY+ Sbjct: 302 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTYLQHLDADCLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K +DG + A +D ++ Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGKL----ADKLADPAL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 + I E ++ RA+ ++++L +RY D Q PW + K A + Sbjct: 418 YKTFTDAATSIAEAYNSRESGRAIREIMALADVANRYVDEQAPWVVAKQEGREADLQAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 478 SMGINLFRVLMTYLKPVLPALTER 501 >gi|258654673|ref|YP_003203829.1| methionyl-tRNA synthetase [Nakamurella multipartita DSM 44233] gi|258557898|gb|ACV80840.1| methionyl-tRNA synthetase [Nakamurella multipartita DSM 44233] Length = 611 Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 152/532 (28%), Positives = 233/532 (43%), Gaps = 71/532 (13%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + TA+A+P N HIGH + ADV +R+ R+ G DVL +GTDEHG I A Sbjct: 5 VLTAVAWPYANGPRHIGHVSGFGVPADVFSRYQRMAGNDVLMVSGTDEHGTPILVQADQE 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV+ + D+ +R + L +SYD F RT+ + H+ + L++ + G Sbjct: 65 GVSARELADRYNRVIVEDLHGLGLSYDLFTRTSTRNHYAVVQELFRTVHRNGYFVAKTTM 124 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNA---QHNPVQ--------------WM 160 S D + Y GA G + Q +P+ + Sbjct: 125 SAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPIDLINPRSRINGETPVFT 184 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218 E E +F L A D L + + ++ R V+ F + L DL T DWGI Sbjct: 185 ESEHFFLDLPALADALGGWLRTRTDW------RPNVLRFSLNLLDDLKPRAMTRDIDWGI 238 Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT-------GYLDNPDGSKAKFW-------PAD 259 +P D P +YVW DA+ YL+ + G PD + W Sbjct: 239 PVPLDGWRDRPDKKLYVWFDAVIGYLSASIEWARRFGKNGEPDPDAWQRWWHGGDEQARA 298 Query: 260 LHVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISK 305 + +GKD + FH+ WPA LL+ L LP +V S F+ G K S Sbjct: 299 YYFMGKDNITFHSQIWPAELLAYDGRGEHGGSAGSFGTLNLPTEVVSSEFLTMSGSKFST 358 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S VI + + E G D+LRYF+ +D + + +R N +LAN GNLV+RS Sbjct: 359 SRRTVIYVGDFLREFGPDSLRYFIAAAGPENQDADFTWEEFVRRNNFELANEWGNLVNRS 418 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 VSM K++ G IP A T++D +L + + + A A+ + +V + Sbjct: 419 VSMAHKNFGG-IPAGTARTDADVELLRASEAAFATVGDLLSRSRFKAASAEAMRVVGLAN 477 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +Y +PW+LK +P+R TVL+ ++V+ LL F+P + +F+ L Sbjct: 478 KYISESEPWKLKD-DPERQGTVLHTALQVVDDAKTLLTPFLPHSSQAVFEAL 528 >gi|224583343|ref|YP_002637141.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254782871|sp|C0Q0Y1|SYM_SALPC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|224467870|gb|ACN45700.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 677 Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503 >gi|159899304|ref|YP_001545551.1| methionyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] gi|159892343|gb|ABX05423.1| methionyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] Length = 574 Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 148/517 (28%), Positives = 240/517 (46%), Gaps = 51/517 (9%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + + ++ A Y + H+GH + +DV AR+ RL G +VL +GTD+HG I A Sbjct: 3 KNILVAVAWPYASGARHLGHVAGFGVPSDVFARYQRLVGNNVLMVSGTDDHGTPITVRAD 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + D + R+ L +SYD F RT+ + H+ + + ++ +KG I+ Sbjct: 63 REGKTPREVTDFYNAEIRNNLRDLGLSYDLFTRTSTENHYQITQAFFTRLQEKGYIFAQE 122 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYN---AQHNPVQWMEEEG-------- 164 G YS D+ + D V Y A G + Q +PV +E Sbjct: 123 MIGTYSEADKRFLPDRYVEGTCPHCGYTKARGDQCDNCGKQLDPVDLIEPRSTLSGATPV 182 Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--W 216 +F L A+ ++L + ES + R V F L D+ T D W Sbjct: 183 FKPTTHFFLNLPAFVERLREWIESQNHW------RPNVKRFSLGLLDDVPARAITRDLTW 236 Query: 217 GIKIPDDPQYI----MYVWIDALTNYLTT----TGYLDNPDGSKAKFWPADL---HVIGK 265 G+ IP + +YVW DA+ YL+ + + P+ + + +D + +GK Sbjct: 237 GVPIPVEGDEFDSKRIYVWFDAVIGYLSAAVEWSIKVGRPEAWRDWWLNSDARHYYFMGK 296 Query: 266 DILRFHAIYWPAFLLS-ANLPLPKKVFSHGFI-LHKGEKISKSL--GNVIDPI-EVIEEV 320 D + FH++ WPA L+ L LP +V S F+ L GEKIS S GN I + E + + Sbjct: 297 DNIVFHSVIWPAMLIGHGELELPYEVVSSEFLTLAGGEKISSSRAEGNSIPFVGEFLAQY 356 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D LRYFLV D + +R N +L GNLV+R +S+ K++ G +PTP Sbjct: 357 DPDPLRYFLVIAGPETSDTEWSLGEFIRRNNEELVATWGNLVNRVLSITHKNF-GHVPTP 415 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 A T DE+ L+ + + + ++ L ++ V+ Y +Q+PW++ KT+ Sbjct: 416 QALTAEDEAALATVRAAFETVGKELEQAHFKAGLIATMAAARSVNEYLASQEPWKVLKTD 475 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +R T+LYV ++ I L L F+P + K+ ++L Sbjct: 476 RERGGTILYVALQAINNLRTLFTPFLPFTSQKLHELL 512 >gi|161502696|ref|YP_001569808.1| methionyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864043|gb|ABX20666.1| hypothetical protein SARI_00743 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 696 Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 231/506 (45%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 25 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 84 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + +ISYD++ T + + +++ ++ + G I Sbjct: 85 LGITPEQMIGEMRHEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 144 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 145 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 203 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 204 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 260 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 261 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFEEYWKKDSDAELYHFIGKDIVYF 320 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 321 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 380 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 381 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 436 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 437 LYKTFTDAAAAIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 496 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 497 CSMGINLFRVLMTYLKPVLPTLSERV 522 >gi|16761097|ref|NP_456714.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|213428244|ref|ZP_03360994.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213586109|ref|ZP_03367935.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213650020|ref|ZP_03380073.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213864934|ref|ZP_03387053.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25009376|sp|Q8Z5C3|SYM_SALTI RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|25293137|pir||AH0776 methionine-tRNA ligase (EC 6.1.1.10) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503395|emb|CAD02534.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi] Length = 677 Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503 >gi|161613158|ref|YP_001587123.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161362522|gb|ABX66290.1| hypothetical protein SPAB_00866 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|320086592|emb|CBY96363.1| Methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 704 Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 33 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 92 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 93 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 152 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 153 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 211 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 212 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 268 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 269 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 328 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 329 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 388 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 389 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 444 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 445 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 504 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 505 CSMGINLFRVLMTYLKPVLPTLSERV 530 >gi|162139570|ref|YP_217157.2| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|205353293|ref|YP_002227094.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857589|ref|YP_002244240.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|68565956|sp|Q57MI5|SYM_SALCH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|226710917|sp|B5R0E7|SYM_SALEP RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|226710918|sp|B5RBZ5|SYM_SALG2 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|205273074|emb|CAR38026.1| Methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206709392|emb|CAR33733.1| Methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 677 Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503 >gi|56412932|ref|YP_150007.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361863|ref|YP_002141499.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|68565964|sp|Q5PJ43|SYM_SALPA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|226710921|sp|B5BE81|SYM_SALPK RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|56127189|gb|AAV76695.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093339|emb|CAR58787.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 677 Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503 >gi|29141207|ref|NP_804549.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|29136833|gb|AAO68398.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 677 Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503 >gi|204929214|ref|ZP_03220357.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321758|gb|EDZ06957.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 677 Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFEEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503 >gi|71281104|ref|YP_269544.1| methionyl-tRNA synthetase [Colwellia psychrerythraea 34H] gi|123733733|sp|Q480H5|SYM_COLP3 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|71146844|gb|AAZ27317.1| methionyl-tRNA synthetase, beta subunit [Colwellia psychrerythraea 34H] Length = 713 Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 138/518 (26%), Positives = 234/518 (45%), Gaps = 46/518 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 + E+ K+ ++ A+ Y N H+GH E I D+ RF R+ G + F D HG I Sbjct: 18 LAEKRKILVTCALPYANGSIHLGHMLEHIQTDIWVRFQRMRGHETYFVCADDAHGTPIML 77 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AQ G+T + ++ ++ +D IS+D++ T + + ++ + KG I Sbjct: 78 KAQELGITPEEMINGVREERIKEFSD-FHISFDNYHTTHSDENKEYSEKIYNALHAKGHI 136 Query: 120 YKGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM-------- 160 S Y + D E G A ++P + + Sbjct: 137 KTRIISQLYDPEKGMFLADRFVKGTCPKCKSEDENGDSCDNCGATYSPTEVLNPRSAISG 196 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + E YFF L A++ L + S L E N++ + + GLK +SR Sbjct: 197 ATPILKDSEHYFFDLPAFETMLSDWIRSGA---LQEEVANKLTEWFEQGLKQWDISRDAP 253 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFW----PADL-HVIGKDI 267 +G +IP+ P YVW+DA Y+ + L + D + FW A+L H IGKDI Sbjct: 254 YFGFEIPNAPGKFFYVWLDAPIGYMGSFKNLCDKDSTIDFDSFWNKNSDAELYHFIGKDI 313 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FH+++WPA L A+ P VF+HGF+ GEK+SKS G I ++ + + LRY Sbjct: 314 INFHSLFWPAMLEGADFRKPTAVFAHGFVTVNGEKMSKSKGTFIKGRTYLDHLNPEYLRY 373 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ D + + +RVN+DL + N+ SR S I K +DGM+ T Sbjct: 374 YYATKLTHKIDDLDLNLEDFVQRVNSDLVGKVVNIASRCASFITKRFDGMLST----NID 429 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444 D+++ I + +++ R + ++++L +V+ Y ++PW+L K T Sbjct: 430 DQALADEVMAAGDSIAAHYESRDFGRGMREIMALADKVNEYIAIKEPWQLVKDETKQQEV 489 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + + + + R L I L+ +P LA+ F+ DE Sbjct: 490 QDICSLGINMFRTLMIYLKPVLPVLADST--AAFLNDE 525 >gi|117925153|ref|YP_865770.1| methionyl-tRNA synthetase [Magnetococcus sp. MC-1] gi|187647733|sp|A0L8S1|SYM_MAGSM RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|117608909|gb|ABK44364.1| methionyl-tRNA synthetase [Magnetococcus sp. MC-1] Length = 686 Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 136/502 (27%), Positives = 225/502 (44%), Gaps = 40/502 (7%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N H+GH E I D+ RFH+L G + ++ D HG I AQ Sbjct: 3 RILVTSALPYANGHIHLGHLVEYIQTDIWVRFHKLRGEECIYMCADDTHGTPIMLRAQKE 62 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + V+Q + + +D++ T + + ++ K D G I Sbjct: 63 GITPEQLVNQMHKEHAQDFAAFFVQFDEYYTTNSEENRLLSEEIYLKNRDGGHIEVDTIQ 122 Query: 126 GWYSLRDEAYYNDDEV-----YKGADGQY------YNAQHNPVQWME------------- 161 Y D + D + + GA QY +A + P + E Sbjct: 123 QAYCEHDAMFLPDRFIRGTCPHCGAVDQYGDSCEVCSATYRPTELKEAKCAVCGSQPVEK 182 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E YFF+L + D L + +S L E ++ + + GLK +SR +G +I Sbjct: 183 SSEHYFFKLQDFSDYLKEWIQSG---TLQPEMAAKLNEWFEQGLKHWDISRDGPYFGFEI 239 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAIY 274 PD P YVW+DA T Y+ TT + G +W D H IGKDIL FH ++ Sbjct: 240 PDAPGKYFYVWLDAPTGYMATTWHHCKKQGINFDDYWRRDDKAEVYHFIGKDILYFHTLF 299 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L + P VF+HGF+ G+K+SKS G I+ + + + LRY+ ++ Sbjct: 300 WPAMLHGSGFRTPTAVFAHGFLTVNGQKMSKSRGTFINARQYSAFLNPEYLRYYYAAKLT 359 Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + D +RVN+DL + NL SR+ I+K ++G + A D+ + Sbjct: 360 SRVDDLDLNLDDFVQRVNSDLVGKVVNLASRTAGFIVKRFEGQL---CADYPEDDGLFQQ 416 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVT 451 + +EI + + +A+ ++ L ++Y + PW L K R V VT Sbjct: 417 FHQAGEEIAALYEKREFAKAMQAIMRLADSANQYVENHAPWVLAKDPLQSQRLQQVCSVT 476 Query: 452 VEVIRQLAILLQAFVPKLANKI 473 + + R L I L+ +P ++N++ Sbjct: 477 LNLFRTLMIFLKPVLPYMSNQV 498 >gi|119469304|ref|ZP_01612243.1| methionyl-tRNA synthetase [Alteromonadales bacterium TW-7] gi|119447168|gb|EAW28437.1| methionyl-tRNA synthetase [Alteromonadales bacterium TW-7] Length = 673 Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 136/505 (26%), Positives = 229/505 (45%), Gaps = 43/505 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ I++A+ Y N H+GH E I D+ +RF +L G + + D HG I AQ Sbjct: 3 QRKILITSALPYANGPTHLGHLLEYIQTDIWSRFQKLQGHETYYVCADDAHGTPIMLNAQ 62 Query: 64 NAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+T + V S RD AD +I +D++ T + + + +++ +++D G I K Sbjct: 63 KQGITPEEMVKNVSIERQRDFAD-FNIKFDNYHSTHSQENKEFSELIYNRLNDAGHIKKH 121 Query: 123 CYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM----------- 160 S + + D E G A ++P + + Sbjct: 122 TISQLFDPEKGIFLPDRFVTGTCPTCKSEDQNGDSCDSCGATYSPTELINPRSVMSGAEP 181 Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + E YFF L A++ L + S + E N++ + GL+ +SR +G Sbjct: 182 ILKDSEHYFFDLPAFEGMLKEWLHSG---TIQQEMANKLDEWFTDGLQQWDISRDAPYFG 238 Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFH 271 +IP+ P YVW+DA Y+ + L + G FW A+L H IGKDI+ FH Sbjct: 239 FEIPNAPGKYFYVWLDAPIGYMASFKNLCDKKGIDFDAFWAEGSEAELYHFIGKDIIYFH 298 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L A P VF+HGF+ GEK+SKS G I ++ + + LRY+ Sbjct: 299 SLFWPAMLEGAKFRKPTNVFAHGFVTVNGEKMSKSKGTFIKARTYLDNLNPEYLRYYYAA 358 Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ G D + + +RVN+DL + N+ SR I K +DG + + T + Sbjct: 359 KLNSGIIDLDLNLEDFAQRVNSDLVGKVVNIASRCAGFITKKFDGKL----SATIMQPEL 414 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVL 448 L I + +N+ RA+ ++++L + +++ D PW L K T A V Sbjct: 415 LEDFQAAAPSITTHFENREYSRAIREIMALADKANQFIDGAAPWVLIKDETKQQEAHDVC 474 Query: 449 YVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P +A + Sbjct: 475 SLGLNLFRVLITYLKPVLPAMAQNV 499 >gi|322615182|gb|EFY12104.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617773|gb|EFY14669.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624633|gb|EFY21464.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626916|gb|EFY23712.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634102|gb|EFY30838.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635707|gb|EFY32417.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640158|gb|EFY36822.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646419|gb|EFY42931.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649387|gb|EFY45823.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656507|gb|EFY52796.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661483|gb|EFY57707.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665629|gb|EFY61813.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667153|gb|EFY63320.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671159|gb|EFY67287.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675200|gb|EFY71277.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680809|gb|EFY76844.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686984|gb|EFY82961.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192748|gb|EFZ77975.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198820|gb|EFZ83919.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323205170|gb|EFZ90148.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208213|gb|EFZ93157.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210977|gb|EFZ95838.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215762|gb|EGA00505.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220692|gb|EGA05138.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224686|gb|EGA08958.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231207|gb|EGA15322.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233642|gb|EGA17734.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237712|gb|EGA21772.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245695|gb|EGA29689.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248941|gb|EGA32865.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252988|gb|EGA36821.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258664|gb|EGA42326.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259496|gb|EGA43131.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323268279|gb|EGA51754.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271931|gb|EGA55347.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 677 Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503 >gi|168818140|ref|ZP_02830140.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|200387153|ref|ZP_03213765.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|187649781|sp|A9N7I2|SYM_SALPB RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|199604251|gb|EDZ02796.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205345163|gb|EDZ31927.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] Length = 677 Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503 >gi|85058948|ref|YP_454650.1| methionyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans'] gi|123725420|sp|Q2NUD0|SYM_SODGM RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|84779468|dbj|BAE74245.1| methionyl-tRNA synthase [Sodalis glossinidius str. 'morsitans'] Length = 679 Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 231/506 (45%), Gaps = 48/506 (9%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I AD+ R+ R+ G + F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHQIYFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + + N N D ISYD++ T + + ++++++ + G I Sbjct: 66 LGIAPEEMI--NEMNLEHQTDFAGFGISYDNYHSTHSEENQQLSTLIYQRLKENGFIKSR 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM---------- 160 S + ++ + D KG+ + + A +NP + Sbjct: 124 TISQLFD-PEKVMFLPDRFVKGSCPKCHSPDQYGDNCEVCGATYNPTDLINPKSAVSGTT 182 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 E E +FF L A+ + + ++ S L + N++ + +SGL++ +SR + Sbjct: 183 PVMRESEHFFFDLPAFSEMMRAWTRSG---ALQEQVANKMQEWFESGLQEWDISRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269 G ++PD P YVW+DA Y++ L D +FW D H IGKDI+ Sbjct: 240 GFEVPDAPGKYFYVWLDAPIGYMSAFQNLCQKRSDLRFDEFWDVDSKADLYHFIGKDIVY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH+++WPA L ++ P +F HG++ G K+SKS G I + + + LRY+ Sbjct: 300 FHSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTYLAHLDAECLRYYY 359 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +RVNAD+ N + NL SR+ I K +DG + A T +D Sbjct: 360 AAKLSSRIDDIDLNLEDFIQRVNADIVNKVVNLASRNAGFINKRFDGQL----AATVADP 415 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--ST 446 ++ + I + ++ RA+ ++++L +RY D Q PW + K A Sbjct: 416 ALYATFVNAATSIGDAFSSRETSRAIREIMALADLANRYVDEQAPWVVAKQEGREADLQA 475 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472 + + +++ R L L+ +P LA + Sbjct: 476 ICSMGIQLFRVLMTYLKPVLPSLAER 501 >gi|254168412|ref|ZP_04875257.1| methionyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|289595772|ref|YP_003482468.1| methionyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|197622693|gb|EDY35263.1| methionyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|289533559|gb|ADD07906.1| methionyl-tRNA synthetase [Aciduliprofundum boonei T469] Length = 734 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 138/524 (26%), Positives = 256/524 (48%), Gaps = 56/524 (10%) Query: 6 KLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++I A Y N H+GH AY + AD+ AR+ R+ G +VL +G+DEHG I A Sbjct: 2 RIFIGVAWPYANGPIHLGHIVGAY--LPADIFARYQRMQGNEVLMVSGSDEHGTPITITA 59 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + G + + D+ + ++ + L IS+D + RT+ H + + ++ + G +YK Sbjct: 60 EKEGKSPQEIADRYHKINSEVMEKLGISFDLYFRTSHPNHEKIVKDFFLRLWENGYLYKK 119 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH----------------NPV 157 Y + + + D V Y+ A G Q N P Sbjct: 120 KMLLPYCPQCKRFLPDRYVVGTCPYCGYENAHGDQCDNCGRMLDPKDLINPRCVICGTPT 179 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI----SFVKSGLKDLSLSRKT 213 ++ E E FF LS + +L + E + R+ VI +FVK GLKD +++R Sbjct: 180 EFRETEHIFFALSKLEGTILKWLEDKTYW------RDNVIKFTRNFVKGGLKDRAITR-D 232 Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFWPAD----LHVIG 264 +WG+++P + +YVW DA+ YL+ + +N D FW + + +G Sbjct: 233 LEWGVEVPLEGFENKKIYVWFDAVIGYLSASIEWARRNNKDWEA--FWKDENTRHYYFLG 290 Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323 KD + FH I WPA L++ L LP V ++ ++ GEK SKS G + E++E D Sbjct: 291 KDNIPFHTIIWPAMLMAHKGLNLPYNVVANEYLRFSGEKFSKSRGIGVWMPELLENFHPD 350 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 +R++ + +D + D ++VN +L + N V R++ +++ G +P G Sbjct: 351 IIRFYGTVNMPESRDSDFTWDDFVQKVNEELIDKFANFVHRALIFAYRNF-GEVPPRGEV 409 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 E D + + + ++++ + M++ + +A + ++L + YFD + PW L K + ++ Sbjct: 410 DEVDREAIKLIMQTIKKMNKYMESVELKKAFKEWLNLARYGNVYFDRKAPWALCKEDREK 469 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487 +T + +++++++ LAIL F+P + +I+ F+ +E+ FQ Sbjct: 470 CATAINISLQIVQALAILGAPFLPFTSERIWK--FLGNEDSIFQ 511 >gi|168242236|ref|ZP_02667168.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168466170|ref|ZP_02700040.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194442893|ref|YP_002041426.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448741|ref|YP_002046208.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197248289|ref|YP_002147126.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|226710915|sp|B5EXZ5|SYM_SALA4 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|226710919|sp|B4T9X0|SYM_SALHS RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|226710920|sp|B4SXY7|SYM_SALNS RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|194401556|gb|ACF61778.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407045|gb|ACF67264.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195631196|gb|EDX49756.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197211992|gb|ACH49389.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205338339|gb|EDZ25103.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 677 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADIANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503 >gi|292492766|ref|YP_003528205.1| methionyl-tRNA synthetase [Nitrosococcus halophilus Nc4] gi|291581361|gb|ADE15818.1| methionyl-tRNA synthetase [Nitrosococcus halophilus Nc4] Length = 674 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 138/508 (27%), Positives = 229/508 (45%), Gaps = 45/508 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N H+GH E I D+ RF R+ + + D HG I AQ Sbjct: 4 RILVTSALPYANGPLHLGHLVEYIQTDIWVRFQRIRSHECYYVCADDAHGTPIMLRAQQE 63 Query: 66 GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++Q R R D AD +S+D++ T + ++ + DKG I Sbjct: 64 GITPEALIEQCGREHRADFAD-FAVSFDNYYSTHSPENRALSETIYLRNRDKGHITTRTV 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQW-------------- 159 Y + D + GA QY A + P + Sbjct: 123 RQAYDPIKGMFLPDRFIRGTCPRCGAPDQYGDSCEACGATYTPTELKDAISVLSGTPPVE 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E YFF+L ++ L ++ + L E N++ + ++GL+D +SR +G Sbjct: 183 RESEHYFFKLKDFEPLLKAWTQGGH---LQHEMANKLNEWFEAGLQDWDISRDAPYFGFP 239 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAI 273 IPD YVW+DA YL + YL + +G + A H IGKDIL FHA+ Sbjct: 240 IPDATDKYFYVWLDAPIGYLASFKYLCDRNGLDFDAFMAPDSTTELYHFIGKDILYFHAL 299 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L A+ LP +F+HGF+ G+K+SKS G I + + + LRY+ ++ Sbjct: 300 FWPAMLHGADFRLPTAIFAHGFLTVNGQKMSKSRGTFIKAHTYLNHLNPEYLRYYFAAKL 359 Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 G +D + + RVNADL + N+ SR I K + + A + E++ Sbjct: 360 GSGIEDLDLNFEDFTARVNADLVGKVVNIASRCAGFINKHFHSRL----ANHLTKEALFQ 415 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT- 451 + + + +N+ A+ ++++L + +RY D ++PW K P R V V Sbjct: 416 EFAAAADRLAQYYENREFGHAMREIMALADQANRYIDDRQPWVAIK-EPGREQEVQEVCT 474 Query: 452 --VEVIRQLAILLQAFVPKLANKIFDIL 477 + + RQL + L+ +P +A K + L Sbjct: 475 LGLNLFRQLMVYLKPVLPMMAEKAEEFL 502 >gi|16765484|ref|NP_461099.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167991077|ref|ZP_02572176.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|198241850|ref|YP_002216239.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|25009378|sp|Q8ZNN4|SYM_SALTY RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|226710916|sp|B5FMX1|SYM_SALDC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|16420690|gb|AAL21058.1| methionine tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197936366|gb|ACH73699.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205330481|gb|EDZ17245.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261247369|emb|CBG25194.1| MetRS [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994216|gb|ACY89101.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158716|emb|CBW18228.1| Methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913145|dbj|BAJ37119.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224806|gb|EFX49869.1| Methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|326623989|gb|EGE30334.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 677 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADIANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503 >gi|323130480|gb|ADX17910.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 704 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 33 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 92 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 93 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 152 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 153 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 211 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 212 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 268 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 269 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 328 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 329 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 388 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 389 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 444 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 445 LYKTFTDAAAVIGEAWESREFGKAIREIMALADIANRYVDEQAPWVVAKQEGRDADLQAI 504 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 505 CSMGINLFRVLMTYLKPVLPTLSERV 530 >gi|168259509|ref|ZP_02681482.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205351288|gb|EDZ37919.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 677 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADIANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503 >gi|288549857|ref|ZP_05968413.2| methionine--tRNA ligase [Enterobacter cancerogenus ATCC 35316] gi|288317653|gb|EFC56591.1| methionine--tRNA ligase [Enterobacter cancerogenus ATCC 35316] Length = 680 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 130/505 (25%), Positives = 232/505 (45%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNEVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + + + S+ + DISYD++ T + + +++ ++ + G I Sbjct: 69 LGISPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A D Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVLSAELA----DPE 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I + +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYKTFTDAAAAIGDAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P+L+ + Sbjct: 481 CTMGLNMFRVLMTWLKPVLPQLSAR 505 >gi|239817050|ref|YP_002945960.1| methionyl-tRNA synthetase [Variovorax paradoxus S110] gi|239803627|gb|ACS20694.1| methionyl-tRNA synthetase [Variovorax paradoxus S110] Length = 704 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 147/529 (27%), Positives = 239/529 (45%), Gaps = 68/529 (12%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M KL+++TA+ Y N + HIGH E I AD+ R R++G +V F D HG I Sbjct: 1 MSAPRKLFVTTALPYANGKFHIGHMMEYIQADIWVRNQRMNGAEVNFVCADDAHGAAITI 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA AGVT + FV + + + D IS+D++ T +H + +++ + G I Sbjct: 61 AADKAGVTPQAFVAEIAAGRKPYLDGYYISFDNWHSTDAPENHQLAQDIYRDLRANGLIE 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM-------- 160 +Y ++ + D KG A QY A + P + + Sbjct: 121 TKSVEQFYD-PEKGMFLADRFIKGECPNCHAKDQYGDNCEVCGAVYAPTELINPYSALSG 179 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV------KSGLKDLS 208 + +FF+LS + + + + E +N++ ++ K GL D Sbjct: 180 AKPELRSSDHFFFKLSDPRCEAYLKEWTAAAGHVQSEVQNKIREWLYKDDEGKGGLGDWD 239 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT-------------------TGYLDNPD 249 +SR +GI+IPD P YVW+DA YL + T Y+ +PD Sbjct: 240 ISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDKRCIELGGDGISYTEYMADPD 299 Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309 + +H IGKDI+ FH ++WPA L + P V+ HG + GEK+SKS G Sbjct: 300 LEQ-------VHFIGKDIITFHTLFWPAMLHFSGRKAPDAVYVHGHLTVSGEKMSKSRGT 352 Query: 310 VIDPIEVIEEVGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 IDP+ + +G+D LRY++ ++ +D ++ + RVN+DL N+ SR+ Sbjct: 353 GIDPLRYL-SIGLDPEWLRYYIAAKLNGRNEDIDFNPEDFVARVNSDLVGKYINIASRAA 411 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 I K + G + G + +++L ++ + RAL +V++L +V+ Sbjct: 412 GFIGKRFGGKL---GEVSADGDALLFALRDAAPQLHSLYDGRDYARALREVMALADKVNE 468 Query: 427 YFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 Y D KPWEL K+ R V V +E R L + L+ +P LA + Sbjct: 469 YVDQNKPWELAKKEGQEARLHDVCTVCIEAFRLLTLYLKPVLPALAANV 517 >gi|150400079|ref|YP_001323846.1| methionyl-tRNA synthetase [Methanococcus vannielii SB] gi|187647751|sp|A6URW2|SYM_METVS RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|150012782|gb|ABR55234.1| methionyl-tRNA synthetase [Methanococcus vannielii SB] Length = 663 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 143/508 (28%), Positives = 237/508 (46%), Gaps = 48/508 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K ++TA+AY N H+GHA I AD+ R+ RL +V GTD HG I A+ Sbjct: 2 KHLVTTALAYTNGPLHLGHARSTYIPADIFTRYLRLKRENVFHVGGTDNHGVPITLKAEK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG-- 122 GVT VD+ ++ D L++S+D F RT H +T + +K + + G IY+ Sbjct: 62 EGVTPLDIVDRYHNAIKEDLDSLNVSFDSFGRTHSDIHIETAQEFYKTLKENGYIYEKEI 121 Query: 123 ----CYSGWYSLRD-----EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG--------- 164 C SL D + + + E +G + P + +E Sbjct: 122 EQFYCEKCSMSLADRYVEGKCPFCEGEA-RGDHCEVCGRHLEPTELLEPYCIHCNSKPEI 180 Query: 165 -----YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 YFF+LSA +++L Y + E +P +N + +++ L D +SR WG+ Sbjct: 181 KKSIHYFFKLSAMKEELTEYITNAKE--MPEHVKNMALRWIEE-LHDWDVSR-NLTWGVP 236 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD------LHVIGKDILRFHA 272 IP +MYVWI+A Y++ T L G K +W + H IGKDI HA Sbjct: 237 IPKSNGQVMYVWIEAPIGYVSFTKEL----GEIWKDYWISKDVQSKITHFIGKDITVHHA 292 Query: 273 IYWPAFLLSA-NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 ++WP L N +P V S G++ + +K+S S V+ + +E+ D LRYFL+ Sbjct: 293 VFWPGILKGVKNYKMPDSVVSGGYLTLENKKMSTSKNWVVWVKDFVEKFSPDYLRYFLMV 352 Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 +D + D +KR+N +L + IGN R++ + + G IP T +E +L Sbjct: 353 NAPLNRDTDFSWDDFQKRINTELIDIIGNFSHRTLVFTERKF-GKIPNVQKDTLKEEDLL 411 Query: 392 SV--CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 + C + + + ++ A+ ++I L E + YF A +PW + T+ +R V+Y Sbjct: 412 LIRKCEKTTETFDKLIREYNFKDAIMEIILLSKEGNAYFQAMQPWAI--TDEERLKEVMY 469 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++ + LL F+P ++ D++ Sbjct: 470 TCCTTLKYIVYLLSPFMPVKTGELLDLM 497 >gi|221065401|ref|ZP_03541506.1| methionyl-tRNA synthetase [Comamonas testosteroni KF-1] gi|220710424|gb|EED65792.1| methionyl-tRNA synthetase [Comamonas testosteroni KF-1] Length = 719 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 152/523 (29%), Positives = 238/523 (45%), Gaps = 50/523 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL+++TA+ Y N HIGH E I AD R R+ G V F D HG I AA+ A Sbjct: 5 KLFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVNFVGADDAHGAPIMIAAEKA 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T + FV + + D I++D++ T +H+ + ++ + G I Sbjct: 65 GKTPQQFVADIAAGRKQYLDGFHIAFDNWSNTDSAENHELSKQIYLDLKAAGFIETRTIE 124 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161 ++ ++ + D KG A QY + NP + Sbjct: 125 QFFD-PEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCSSVYAPTDLINPFSALSGATPVM 183 Query: 162 --EEGYFFRLSAYQ--DKLLSYYES----HPEFILPIER----RNEVISFVKSGLKDLSL 209 E +FF+LS + + L + +S PE I+ R GL D + Sbjct: 184 KSSEHFFFKLSDPRAVEFLTEWTQSGQHVQPEVAAKIKEWFGVRTNPDGSTSEGLDDWDI 243 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264 SR +GI+IPD P YVW+DA YL + L N G + AD H IG Sbjct: 244 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKELLNRRGEDYDAYMADPALEQYHFIG 303 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIE-EVGV 322 KDI+ FH ++WPA L + P ++ HGF+ ++ GEK+SKS G +DP++ + ++ Sbjct: 304 KDIITFHTLFWPAMLKFSGRKTPTRICVHGFMTVNNGEKMSKSRGTGLDPLKYLSLKMNP 363 Query: 323 DALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + LRY+L ++ +D ++ + RVN+DL N+ SR+ I K +DG + G Sbjct: 364 EWLRYYLGAKLNGKNEDIDFNPEDFMLRVNSDLIGKYVNIASRAAGFISKRFDGRL---G 420 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTN 440 +E +++L+ I + + RA +++ L +V+ Y DA KPWEL KK Sbjct: 421 VVSEDGQTLLAALREQQAAIVAAYEGRDSARAAREIMLLCDKVNSYVDANKPWELAKKEG 480 Query: 441 PD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 D R V +E R L I L +P +A ++ + L V E Sbjct: 481 MDARLHDVCTTCIEAFRILTIYLSPILPGVAAEVANFLIVPPE 523 >gi|82777409|ref|YP_403758.1| methionyl-tRNA synthetase [Shigella dysenteriae Sd197] gi|123769585|sp|Q32EI8|SYM_SHIDS RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|81241557|gb|ABB62267.1| methionine tRNA synthetase [Shigella dysenteriae Sd197] Length = 677 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 130/505 (25%), Positives = 232/505 (45%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +++ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KQILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNSAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPE 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502 >gi|68536602|ref|YP_251307.1| methionyl-tRNA synthetase [Corynebacterium jeikeium K411] gi|123775680|sp|Q4JU18|SYM_CORJK RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|68264201|emb|CAI37689.1| metS [Corynebacterium jeikeium K411] Length = 612 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 152/533 (28%), Positives = 250/533 (46%), Gaps = 69/533 (12%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +++ S A Y N HIGH + +DV AR+ R+ G +VL +GTDEHG + A+ Sbjct: 3 KRVLTSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMAGNEVLMVSGTDEHGTPLLVQAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + D+ +R + L +SYD F RTT + H+ + L+ + + G + Sbjct: 63 KEGTTVQELADRYNRIIVEDLAGLGLSYDLFTRTTTRNHYAVVQELFTGLYNNGYMVTQT 122 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------Q 158 G S D + K A G + N + + Sbjct: 123 TRGAISPSTGRTLPDRYIEGTCPICGAKDARGDQCDNCGNQLDPEDLIDPRSKINGETPE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFD 215 +++ E + L A + L ++ + ++ R V+ F + L+D+ ++SR D Sbjct: 183 FIDTEHFMLDLPALAEALTTWLKGRTDW------RPNVLKFSLNLLEDIRPRAMSRD-ID 235 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HV 262 WG+ IP D+ +YVW DA+ YL+ + + +PD + K+W P L + Sbjct: 236 WGVPIPVEGWQDNNAKKLYVWFDAVVGYLSASIEWAWRIGDPDAWR-KWWNDPEALSYYF 294 Query: 263 IGKDILRFHAIYWPAFLLSAN----------------LPLPKKVFSHGFILHKGEKISKS 306 +GKD + FH+ WPA LL L LP +V S F+ G K S S Sbjct: 295 MGKDNITFHSQIWPAELLGYGGQGSKGGEAGDLADPALNLPTEVVSSEFLTMSGSKFSSS 354 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 G VI + ++E G DALRYF+ D + D +R+N++LAN GNLV+R+V Sbjct: 355 KGVVIYVRDFLKEFGPDALRYFIATAGPETTDTDFTWDEFVRRINSELANEWGNLVNRTV 414 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 SM K++ G +PTPG T DE++L+ ++ + +N+ + + + + ++ Sbjct: 415 SMAYKNF-GEVPTPGPLTAEDEALLAESAKAFDVVGDNINLSRFKAGITEAMRIAGRANQ 473 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y A +PW+L K +R +TVLY ++V+ + LL ++P A KIF+ L Sbjct: 474 YIAAMEPWKLAKDENQRERLATVLYTALQVVSDVNTLLTPYLPFSAQKIFETL 526 >gi|303244973|ref|ZP_07331297.1| methionyl-tRNA synthetase [Methanothermococcus okinawensis IH1] gi|302484684|gb|EFL47624.1| methionyl-tRNA synthetase [Methanothermococcus okinawensis IH1] Length = 691 Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 141/515 (27%), Positives = 238/515 (46%), Gaps = 53/515 (10%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 EK I+TA+AY N H+GHA I AD++ R+ +L+ DV+ GTD HG I A+ Sbjct: 3 EKYLITTALAYTNGPLHLGHARSTYIPADIMRRYLKLNKKDVIHVGGTDNHGVPITITAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV + V++ + D L+I +D + +T H T + + K+ + G IY+ Sbjct: 63 KEGVKPEDIVNKYHNEIKRDLDNLNIEFDSYGKTHSDIHIKTAQEFYLKLKENGYIYEKE 122 Query: 124 YSGWYSLRDEAYYNDDEV-----YKGADGQY------------------YNAQHNPVQWM 160 +Y + + D V + G + + Y N + Sbjct: 123 IEQFYCPKCNRFLADRYVEGICPFCGGEARGDHCEVCGRHLEPTELINPYCVNCNTTPEL 182 Query: 161 EEEGY-FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + + FF+LSA D L Y ES +P +N S++K L D +SR DWG+ Sbjct: 183 RKTIHRFFKLSALSDDLRRYVESSD---MPEHVKNMAYSWIKE-LHDWDISR-DIDWGVP 237 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYL-------------DNPDG--SKAKFWPADLHVIG 264 IPD +MYVW++A Y++ T L +N +G + K W H IG Sbjct: 238 IPDSENQVMYVWLEAPIGYISFTKQLGEVWKDYWLKKDKENSNGKNNNVKIW----HFIG 293 Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323 KDI H+++WP L++ LP V S G++ +G K+S S V+ + ++ D Sbjct: 294 KDITVHHSVFWPGMLIANGEYNLPSSVISGGYLTLEGRKMSTSKKWVVWVDDFVKYFDSD 353 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGA 382 LRYFL+ +D + D +KR+N +L IGN R++ + + + I Sbjct: 354 YLRYFLMVNAPLNRDCDFSFDEFQKRINTELIAIIGNFTHRALVFSHRKFKEIPIVDEEN 413 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 + D+ ++S C ++++ ++ AL V+ L + + YF +PW ++ N + Sbjct: 414 LKDEDKELISRCKETVKKVDNHIMEFNFKDALMGVVHLAKDGNNYFQKMEPWTVE--NEN 471 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 R +LY V++ + LL F+P + K+ D++ Sbjct: 472 RLREILYTCAVVVKHILYLLYPFMPNKSMKLLDLM 506 >gi|330433077|gb|AEC18136.1| methionyl-tRNA synthetase [Gallibacterium anatis UMN179] Length = 680 Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 134/519 (25%), Positives = 240/519 (46%), Gaps = 45/519 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M R ++ ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I Sbjct: 1 MSSRRQILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIML 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A G++ + + + +ISYD++ T + + ++ K+ G I Sbjct: 61 KADQMGISPEQLIADVQQQHISSFSGFNISYDNYYSTHSPENQELSCAIYTKLKQNGFIK 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM-------- 160 S Y ++ + D KG A+ QY +A ++P + + Sbjct: 121 SKTISQLYD-PEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPTELINPRSVVSG 179 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E E +FF L +++ L + +S L E N+++ + +SGL+ +SR Sbjct: 180 ATPVLKESEHFFFDLPSFESMLKDWIKSGS---LQAEVSNKMMEWFESGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVIGKDIL 268 +G +IP+ P YVW+DA Y+ + L + FW + H IGKDI+ Sbjct: 237 YFGFEIPNQPGKYFYVWLDAPIGYMASFKNLCSRKNIDFDHFWQQNSNTELYHFIGKDIV 296 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH+++WPA L A P +F HG++ GEK+SKS G I +E + + LRY+ Sbjct: 297 YFHSLFWPAMLEGAGYRKPNNIFVHGYVTVNGEKMSKSRGTFIQAKTYLEHLDPECLRYY 356 Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 +++ D + + +RVN+D+ N + NL SR+ I K + G + A D Sbjct: 357 YAAKLSGRIDDLDLNLEDFVQRVNSDIVNKLVNLASRNAGFIQKRFGGKL----ADRLHD 412 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445 +++ S+ ++I ++ +N+ ++A+ ++++L + ++Y D PW + K Sbjct: 413 QALWQEFSQQAEQIAQHYENREYNKAIREIMNLCDKANKYVDETAPWVIAKDENRQQELH 472 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 V + +++ R L L+ +P LA + F+ DE R Sbjct: 473 EVCSMGIQMFRMLMGYLKPVLPTLAERA--EAFLHDELR 509 >gi|168236320|ref|ZP_02661378.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737671|ref|YP_002115244.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|226710922|sp|B4TNL2|SYM_SALSV RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|194713173|gb|ACF92394.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290599|gb|EDY29954.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 677 Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFEEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAAVVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + + R L L+ +P L+ ++ Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503 >gi|227356723|ref|ZP_03841109.1| methionyl-tRNA synthetase [Proteus mirabilis ATCC 29906] gi|227163231|gb|EEI48162.1| methionyl-tRNA synthetase [Proteus mirabilis ATCC 29906] Length = 675 Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 135/503 (26%), Positives = 229/503 (45%), Gaps = 44/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ R+ G +V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + +++ S+ + +ISYD++ T + + ++ + G I S Sbjct: 67 GITPEAMIEEMSKEHQQDFAGFNISYDNYHSTHSEENRQLSTKIYLALKKNGHIKSKTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160 Y ++ + D KG A QY + ++P + + Sbjct: 127 QLYD-EEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGSTYSPTELINPRSVVSGSTPVM 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E YFF L A+ + L + S L + N++ + SGL+ ++R +G + Sbjct: 186 RETEHYFFDLPAFSNMLQEWIRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW----PADL-HVIGKDILRFHA 272 IPD P YVW+DA Y+ + L G S +FW DL H IGKDI+ FH+ Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFLNLCEKRGDLSFDEFWNKESKTDLYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P +F HG++ G K+SKS G I ++ D LRY+ + Sbjct: 303 LFWPAVLEGSEYRKPTNLFVHGYVTVNGAKMSKSRGTFITARAYLDHFDADCLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 ++ D + + +RVN+D+ N + NL SR+ I K +DG + A + D + Sbjct: 363 LSSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRTAGFISKRFDGKL----AASLDDAKLY 418 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + I + +N+ +A+ ++++L E +RY D + PW + K A + Sbjct: 419 QHFVDMQESIAQCFENREFGKAIREIMALADEANRYIDEKAPWVVAKQEGKEAELQAICT 478 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 479 MGINLFRVLMTYLKPILPSLTER 501 >gi|227871837|ref|ZP_03990239.1| methionine--tRNA ligase [Oribacterium sinus F0268] gi|227842338|gb|EEJ52566.1| methionine--tRNA ligase [Oribacterium sinus F0268] Length = 468 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 108/279 (38%), Positives = 160/279 (57%), Gaps = 16/279 (5%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAF 278 D + ++YVW+DAL+NY+T GY + DG K+WPADLH+IGKDI+RFH IYWP F Sbjct: 4 DEKNVVYVWLDALSNYITGIGY--DVDGEHQERFKKYWPADLHLIGKDIVRFHTIYWPIF 61 Query: 279 LLSANLPLPKKVFSHGFIL------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 L+S N+PLPK+VF H ++L +G K+SKS GNVI +++ GVDA+R+F++ E Sbjct: 62 LMSLNVPLPKQVFGHPWLLTATAKSDEGTKMSKSRGNVIYADDLVRLFGVDAVRFFVMHE 121 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 + DG + + +R N+ LAN +GNLV R++SM K +DG++ G D+ + + Sbjct: 122 MPFENDGVISWELMVERFNSQLANILGNLVKRTISMSNKYFDGIVEDKGVTEPVDQDLKN 181 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYV 450 + M + AL + + ++Y D +PW L K + DR TVLY Sbjct: 182 TVLEQAKLAASKMDELKVADALTAIFEIFRRSNKYIDETEPWVLAKEESKADRLRTVLYN 241 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489 E I A LL++F+P +I + L + R F SL Sbjct: 242 LTESIVIGASLLKSFMPSTGAEILEQLSTTE--RDFASL 278 >gi|270013433|gb|EFA09881.1| hypothetical protein TcasGA2_TC012029 [Tribolium castaneum] Length = 287 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 100/277 (36%), Positives = 154/277 (55%), Gaps = 13/277 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL-FTTGTDEHGQKIAK 60 + K +++T I Y NA PHIGH Y +IAD L R+ ++ G F+TGTDEHG KI + Sbjct: 15 QSNSKFFVTTPIYYVNASPHIGHLYSSVIADALYRWQQVLGAGKFKFSTGTDEHGSKIQQ 74 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA + + S +++ +++V ISY DF+RT+++ H W + +KG I+ Sbjct: 75 AAHKNNTNPSDYCTRVSSDYKRLSEVFSISYTDFVRTSDEEHKKCVHKFWNVLKNKGKIF 134 Query: 121 KGCYSGWYSLRDEAYYNDDEVYK--GADGQ---YYNAQHNPVQWMEEEGYFFRLSAYQDK 175 Y+GWY + DE++ + ++ + G DG+ +PV+W+EE Y F L + QD Sbjct: 135 SSKYAGWYCISDESFLTESQLKEKVGPDGRKTIISGESGHPVEWIEEVNYMFPLGSLQDD 194 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWI 232 + Y+ + P + + ++ V G L D+S+SR WGI++PDD +YVW+ Sbjct: 195 -VKYWLRSENAVRPAKFQKILLDMVSKGPLPDISISRPASRVHWGIQVPDDETQTVYVWL 253 Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269 DAL NYLT GY S + WP + VIGKDIL+ Sbjct: 254 DALVNYLTAAGY---SHASLHQIWPPSVQVIGKDILK 287 >gi|269928562|ref|YP_003320883.1| methionyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] gi|269787919|gb|ACZ40061.1| methionyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] Length = 593 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 146/517 (28%), Positives = 234/517 (45%), Gaps = 46/517 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E++ + A Y N H+GH + + AD+ AR+HRL G VL +G+D HG I +A+ Sbjct: 3 ERIGVFVAWPYANGDLHLGHVAGVYLPADIFARYHRLRGNRVLMVSGSDAHGTPITVSAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AGV+ + F ++ R F + L IS+D F T + H + +++ + ++G I+ Sbjct: 63 RAGVSPREFFERYHRRFLESFIGLGISFDLFTHTDTENHAAVSQDIFRVLYERGYIHTEA 122 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYN------------------AQHNPV 157 + Y D+ + D V Y A G + PV Sbjct: 123 MAQLYCETDQRFLPDRYVEGTCPHCGYPNARGDQCDNCGRTLDATELIDPRCKLCGSQPV 182 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 E E +FF L A++ LL Y + ++R E ++++ GLK ++R +WG Sbjct: 183 V-RETEHFFFDLPAFEGPLLEYIGRQEHWRPNVQRFVE--NYLRGGLKPRPVTRD-IEWG 238 Query: 218 IKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA--------DLHVIGKD 266 I +P P Y +MYVW +A+ YL+ + G + K W A + IGKD Sbjct: 239 IPVPI-PGYEHKVMYVWFEAVIGYLSASIEAAKNRGEE-KAWEAWWTDPAARGYYFIGKD 296 Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324 + FHAI WPA L+ + L LP + + F+ +G++ S S + + +E D Sbjct: 297 NIPFHAIIWPAELMGYDERLNLPFDIPASEFLNLEGQQFSTSRNWAVWLPDYLERYAPDP 356 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY+L D + G +R N +L GNLV+R +S ++ +DG +P PG Sbjct: 357 LRYYLTAIAPETGDSEFTWRGYVERNNNELVAAWGNLVNRVISFAVRHWDGRVPEPGPQD 416 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 D +L S + + AL + +SL EV+RY D + PW K + A Sbjct: 417 ARDTELLDQISAGFGTVGAHYARAEFRAALRETMSLAREVNRYLDDKAPWFQIKEDRAAA 476 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 T +YV + I LA L +P + ++ L D Sbjct: 477 GTTIYVALRAIDSLATLFAPVLPFTSAEVKRFLGYED 513 >gi|227497764|ref|ZP_03927950.1| methionine--tRNA ligase [Actinomyces urogenitalis DSM 15434] gi|226832819|gb|EEH65202.1| methionine--tRNA ligase [Actinomyces urogenitalis DSM 15434] Length = 613 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 155/531 (29%), Positives = 242/531 (45%), Gaps = 61/531 (11%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +I +A+A+P N HIGH + +DV +R+ R+ G DVL +GTDEHG I AA Sbjct: 3 HILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + D+N+R + L +SYD F RTT H+ + +++ + D G + + Sbjct: 63 EGISARELADRNNRLIVEDLVALGLSYDLFTRTTAGNHYRVVQEMFRTVRDNGYMVEQVT 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159 S D + GA G +A N + ++ Sbjct: 123 RSAISPSTGRTLPDRYIEGTCPICGTPGARGDQCDACGNQLDPTDLIDPHSRINGEVPEF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 +E +F L A + L ++ + E R VI F K+ L+++ T DWG Sbjct: 183 VESNHWFLDLPALAEALGAWLD---EREASGTWRPNVIRFSKNILEEIRPRAMTRDIDWG 239 Query: 218 IKIP---DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HVIGKD 266 I +P D P +YVW DA+ YL+ + +P+ + ++W P L + +GKD Sbjct: 240 IPVPGWEDQPTKRLYVWFDAVIGYLSASIEWARRTGDPEAWR-QWWNDPQALSYYFMGKD 298 Query: 267 ILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312 + FH+ WPA LL N L LP +V S F+ +G K S S G VI Sbjct: 299 NIVFHSQIWPAELLGYNGQGDKGGHSGELGVLNLPTEVVSSEFLTMEGRKFSSSHGIVIY 358 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 + + DALRYF+ D + +R N +L G GNLV+R+ SMI K Sbjct: 359 VRDFLARYQADALRYFISAAGPETADADFTWAEFVRRTNGELVAGWGNLVNRTASMIHKR 418 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 + G IP PG E D +L + E +++ ALA+ + LV E ++Y + Sbjct: 419 F-GEIPEPGELEEIDRVLLDSIETGFTTVGELIRHHRQKAALAEAMRLVGEANKYVADTE 477 Query: 433 PWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 P++LK R +T+L+ + + L ++L F+P AN + IL A E Sbjct: 478 PFKLKSEEQLPRLATILHTLAQAVADLNLMLSPFLPHAANDVDRILGGAGE 528 >gi|300770034|ref|ZP_07079913.1| methionine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861] gi|300762510|gb|EFK59327.1| methionine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861] Length = 689 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 142/540 (26%), Positives = 259/540 (47%), Gaps = 42/540 (7%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 + ++++ I++A+ Y N HIGH A I D+ R+ RL+ DV++ G+DEHG I Sbjct: 3 ITDKKRYTITSALPYANGPLHIGHLAGAYIPGDIFVRYLRLNQKDVVYVCGSDEHGAAIT 62 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +D+ ++ ++ + IS+D + RT+E HH + + + +KG+ Sbjct: 63 IKAKKEGITPREIIDKYNQQIKESFEEFGISFDIYHRTSEPVHHQLSQEFFLNLYNKGEF 122 Query: 120 YKGCYSGWYSLRDEAYYND-----------------DEVYKGADGQYYNAQHNPVQWM-- 160 + +Y + D D+ K NP+ + Sbjct: 123 IERFSEQYYDEEFHQFLADRYIVGTCPNCHSEGAYGDQCEKCGTSLSPTDLINPISTLSG 182 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + ++ L YQ L + + L + +S++KSGL+ S++R Sbjct: 183 KTPVLKETKHWYLPLDKYQPWLEKWLIEGKKDELKSNVYGQCLSWLKSGLQPRSMTRD-L 241 Query: 215 DWGIKIP--DDPQYIMYVWIDALTNYLTTTGY--LDN----PDGSKAKFWPAD----LHV 262 DWG+ +P + +YVW+DA Y++ T LDN D K + P D +H Sbjct: 242 DWGVDVPLEEAEGKKLYVWLDAPIGYISATKQWALDNGKNWEDYWKEQPDPEDNSCLIHF 301 Query: 263 IGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV- 320 IGKD + FH I +PA L + + LP+ + ++ F+ +G+K+S S + + E ++E Sbjct: 302 IGKDNIVFHCIIFPAILHAHGDYILPENIPANEFLNLEGDKLSTSRNHAVWLHEYLQEFP 361 Query: 321 -GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 D LRY L + D + + RVN +L +GN ++R + + K +DG I + Sbjct: 362 GKQDELRYVLTSILPETSDSEFTWKDFQARVNNELVAILGNFINRVMVLSHKYFDGKILS 421 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 + D+ + + + ++I ++ ALAQ +++ ++Y +PW++ KT Sbjct: 422 GSDLQDEDKQVFAELKKYPEQITHSINQYRFREALAQFMNVARLGNKYLAEAEPWKVIKT 481 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499 + +R TVL V++++ LAIL Q F+PK A K+F++L + ++ + LK G L Sbjct: 482 DEERVKTVLNVSLQIAANLAILAQPFLPKTATKLFEMLNLPQQDWERAGEENLLKDGHEL 541 >gi|317492497|ref|ZP_07950925.1| methionyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919489|gb|EFV40820.1| methionyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 684 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 134/504 (26%), Positives = 233/504 (46%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I ADV RF R+ G +V F D HG I AQ Sbjct: 12 KILVTCALPYANGSIHLGHMLEHIQADVWVRFQRMRGNEVHFICADDAHGTPIMLKAQQL 71 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + S+ +D +D +ISYD++ T + + + +++ ++ + G I Sbjct: 72 GIEPEQMIAAVSQEHQKDFSD-FNISYDNYHSTHSEENRELSSLIYGRLKENGFIKNRTI 130 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 131 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPI 189 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ ++R +G Sbjct: 190 MRESEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDITRDAPYFGF 246 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILRFH 271 +IPD P YVW+DA Y+ + L D S +FW D H IGKDI+ FH Sbjct: 247 EIPDAPGKYFYVWLDAPIGYMGSFKNLCEKRSDLSFDEFWRKDSSTELYHFIGKDIVYFH 306 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L +N P VF HG++ G K+SKS G + ++ + D LRY+ Sbjct: 307 SLFWPAMLEGSNFRKPSNVFVHGYVTVNGAKMSKSRGTFVQARTYLDHLDPDCLRYYYAA 366 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K + G + A D ++ Sbjct: 367 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFGGKLSEHLA----DPAL 422 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 EI + +N+ +A+ ++++L +RY D Q PW + K A + Sbjct: 423 YQTFVNAADEIAQAYENRESGKAIREIMALADLANRYVDEQAPWVVAKEEGRDADLQAIC 482 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L+ + Sbjct: 483 SMGINLFRVLMTYLKPVLPSLSER 506 >gi|197284543|ref|YP_002150415.1| methionyl-tRNA synthetase [Proteus mirabilis HI4320] gi|226710913|sp|B4ESY6|SYM_PROMH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|194682030|emb|CAR41525.1| methionyl-tRNA synthetase [Proteus mirabilis HI4320] Length = 675 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 135/503 (26%), Positives = 228/503 (45%), Gaps = 44/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ R+ G +V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + +++ S+ + +ISYD++ T + + ++ + G I S Sbjct: 67 GITPEAMIEEMSKEHQQDFAGFNISYDNYHSTHSEENRQLSTKIYLALKKNGHIKSKTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160 Y ++ + D KG A QY + ++P + + Sbjct: 127 QLYD-EEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGSTYSPTELINPRSVVSGSTPVM 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E YFF L A+ + L + S L + N++ + SGL+ ++R +G + Sbjct: 186 RETEHYFFDLPAFSNMLQEWIRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW----PADL-HVIGKDILRFHA 272 IPD P YVW+DA Y+ + L G S +FW DL H IGKDI+ FH+ Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFLNLCEKRGDLSFDEFWNKESKTDLYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P +F HG++ G K+SKS G I ++ D LRY+ + Sbjct: 303 LFWPAVLEGSEYRKPTNLFVHGYVTVNGAKMSKSRGTFITARAYLDHFDADCLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 ++ D + + +RVN+D+ N + NL SR+ I K +DG + A D + Sbjct: 363 LSSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRTAGFISKRFDGKL----AANLDDAKLY 418 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + I + +N+ +A+ ++++L E +RY D + PW + K A + Sbjct: 419 QHFVDMQESIAQCFENREFGKAIREIMALADEANRYIDEKAPWVVAKQEGKEAELQAICT 478 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 479 MGINLFRVLMTYLKPILPSLTER 501 >gi|156933303|ref|YP_001437219.1| methionyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894] gi|156531557|gb|ABU76383.1| hypothetical protein ESA_01115 [Cronobacter sakazakii ATCC BAA-894] Length = 690 Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 131/505 (25%), Positives = 231/505 (45%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 19 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 78 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + +++ ++ + G I Sbjct: 79 LGITPEQMIAEMSKEHQTDFAGFNISYDNYHSTHSDENRVLSELIYTRLKENGFIKNRTI 138 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 139 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 197 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 198 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 254 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D HVIGKDI+ F Sbjct: 255 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSDAELYHVIGKDIVYF 314 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L + P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 315 HSLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYA 374 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG + A +D + Sbjct: 375 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGEL----AAELADPA 430 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 431 LYQTFTDAAAVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 490 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P+L + Sbjct: 491 CSMGINLFRVLMTYLKPVLPELCAR 515 >gi|310822488|ref|YP_003954846.1| methionyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] gi|309395560|gb|ADO73019.1| Methionyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] Length = 708 Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 148/546 (27%), Positives = 245/546 (44%), Gaps = 49/546 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 EK+ +++A+ Y N HIGH E + D+ RF R G +V++ D HG I A Sbjct: 3 EKILVTSALPYANGPIHIGHVVEYVQTDIYVRFLRSCGKNVVYFCADDTHGTPIELNAAK 62 Query: 65 AGVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + FV + R D AD DIS D F T + +++ ++ +KGDI + Sbjct: 63 QGLKPEEFVARCYELHRKDFAD-FDISVDYFHSTHSPENRAYSELIYGRLKEKGDIERRD 121 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWMEEEGYFFRLSA 171 Y +D+ + D KG A QY ++ ++P ++ Sbjct: 122 IEQTYCEKDKRFL-PDRFIKGTCPNCKAKDQYGDSCEKCGKAYSPTDLIDPHCSLCGTPP 180 Query: 172 YQDK---LLSYYESHPEFILPIERR---------NEVISFVKSGLKDLSLSRKTFDWGIK 219 + + L H F+ + RR ++ F + GL D +SR +G Sbjct: 181 VRKRSTHLFFKLSRHEAFLRELLRRPGFLNQGLATQLQGFFEKGLADWDISRDGPYFGFA 240 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFWPAD-----LHVIGKDILRFH 271 IP + YVW+DA Y+ TT G S +W D +H IGKDI+ FH Sbjct: 241 IPGETDKYFYVWLDAPIGYIATTEKWAQETGKAKSALDYWGPDSNTRIVHFIGKDIVYFH 300 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 A++WPA L A+L P +V +HG + GEK+SK+ G +I + ++++ LR+F Sbjct: 301 ALFWPAVLKVADLHGPDEVKAHGHLTVNGEKMSKTRGTLIPARDYLDKLDPSYLRFFYAA 360 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 + G + F + RVN +L N +GNL +R+++M+ + + PG+ + Sbjct: 361 CLGSGPEDFDLSLKDFRLRVNGELVNNVGNLANRALTMLAGPLEKRL-APGSTGAGKALV 419 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + +RV E+RE + A+ ++ + + + AQ PW KT+ + A L Sbjct: 420 EAALARV-PEVREAFEKLEYRNAIKAIVEISQTANAFLQAQAPWAKVKTDAEGARADLSD 478 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL------FVADENRCFQSLDQRLKPGFMLHKTFD 504 +V+ L LL +P++ +K+F L F A E + LD+ G T + Sbjct: 479 AADVVYLLGALLAPVIPRVTDKLFAQLGAPPLTFAALETARYPLLDRSRPIG-----TPE 533 Query: 505 PIFPRF 510 P+ PR Sbjct: 534 PLLPRL 539 >gi|309812809|ref|ZP_07706547.1| methionine--tRNA ligase [Dermacoccus sp. Ellin185] gi|308433226|gb|EFP57120.1| methionine--tRNA ligase [Dermacoccus sp. Ellin185] Length = 635 Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 157/563 (27%), Positives = 247/563 (43%), Gaps = 95/563 (16%) Query: 6 KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K+ + A Y N HIGH + +DV +R+ R+ G DVL +GTDEHG I A+ Sbjct: 3 KVLSAVAWPYANGPRHIGHVAGFGVPSDVYSRYMRMAGHDVLMVSGTDEHGTPIVIMAEK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG T + F D+N+ D L +SYD F RTT H++ + L+ + + G + + Sbjct: 63 AGKTPQEFADENASIIVDDLVGLGLSYDLFTRTTTANHYEVVQKLFLALHENGYMVEQTT 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159 SG S D + Y A G + N + ++ Sbjct: 123 SGAISPSTGRTLPDRYIEGTCPICKYAEARGDQCDNCGNQLDPTDLIDPRSKINGETPEF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 +E + +F L A D L S+ + R VI F ++ L+++ T DWG Sbjct: 183 IETQHFFLDLPALADALSSWLDGREATGT---WRPNVIKFSQNILEEIRPRAMTRDIDWG 239 Query: 218 IKIPDD-----PQYIMYVWIDALTNYLTTT----GYLDNPD------------GSKAKFW 256 I +P D P +YVW DA+ YL+ + L PD G A+ Sbjct: 240 IPVPLDGWREQPTKRLYVWFDAVVGYLSASIEWARRLGEPDKWREWWNAPASTGGDAELA 299 Query: 257 PADL---------------------------HVIGKDILRFHAIYWPAFLLSAN------ 283 A+ + +GKD + FH+ WPA LL+AN Sbjct: 300 RAERATSDEGSVGAQKASEVLGNSDGVAVSKYFMGKDNIVFHSQIWPAELLAANGEGAKG 359 Query: 284 --------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 L LP +V S F+ +G++ S S G+VI +V+E G D LRYF+V Sbjct: 360 GVESPFGHLNLPSEVVSSEFMTMEGKQFSTSRGHVIYVKDVLERYGPDPLRYFIVAAGPE 419 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 +D + +R N++L G GNLV+R+ SMI K++ G IP P + D +L Sbjct: 420 SQDADFTWAEFVQRNNSELVAGWGNLVNRAASMIHKNF-GEIPAPSELADVDREVLDAVR 478 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEV 454 + ++ + AL + + LV EV+RY +P++LK + +R +TVL+ + Sbjct: 479 GGFATVGALIERNRLKAALTETMRLVGEVNRYVAVTEPFKLKGEDERERLATVLHTLAQC 538 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 + L ++ FVP AN + +++ Sbjct: 539 VVDLNTMMAPFVPFSANLVHEVM 561 >gi|187649791|sp|A7MHL3|SYM_ENTS8 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS Length = 677 Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 131/505 (25%), Positives = 231/505 (45%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + +++ ++ + G I Sbjct: 66 LGITPEQMIAEMSKEHQTDFAGFNISYDNYHSTHSDENRVLSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D HVIGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSDAELYHVIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L + P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYA 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG + A +D + Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGEL----AAELADPA 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYQTFTDAAAVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P+L + Sbjct: 478 CSMGINLFRVLMTYLKPVLPELCAR 502 >gi|146312363|ref|YP_001177437.1| methionyl-tRNA synthetase [Enterobacter sp. 638] gi|145319239|gb|ABP61386.1| methionyl-tRNA synthetase [Enterobacter sp. 638] Length = 680 Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 130/505 (25%), Positives = 230/505 (45%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G V F D HG I AQ Sbjct: 9 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHQVNFICADDAHGTPIMLKAQQ 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + + + S+ + DISYD++ T + + +++ ++ + G I Sbjct: 69 LGISPEQMITEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 128 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S + ++ + D KG + + A ++P + +E Sbjct: 129 SQLFD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IPD P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 245 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 304 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L + P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 305 HSLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D + Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIGKRFDGVM----AAELADPA 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E + + +A+ ++++L +RY D Q PW + K A + Sbjct: 421 LYKTFTDAATAIGEAWEAREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L+ + Sbjct: 481 CSMGINLFRVLMTYLKPVLPTLSER 505 >gi|325281890|ref|YP_004254432.1| Methionyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712] gi|324313699|gb|ADY34252.1| Methionyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712] Length = 676 Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 144/516 (27%), Positives = 248/516 (48%), Gaps = 42/516 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M + ++ I+TA+ Y N HIGH A + AD+ R+ R G +V+F G+DEHG I Sbjct: 1 MAKFKRNLITTALPYANGPVHIGHLAGVYVPADIYVRYLRQKGEEVVFIGGSDEHGVPIT 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AQ GVT + VD+ + +D + IS+D + RT+ K HH+ +KK+ D+G Sbjct: 61 IKAQKEGVTPQDIVDRYHQIIKDSFEEFGISFDIYSRTSSKTHHELSSAFFKKLYDEGKF 120 Query: 120 YKGCYSGWYSLRDEAYYND-----------DEVYKG----ADGQYYNAQH---------- 154 + +Y + + D +E G A G NA Sbjct: 121 IEKTSMQFYDEKAGQFLADRYIVGKCPHCGNERAYGDQCEACGTSLNATDLIDPVSAVTG 180 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 N + E + ++ L Y+D L + E H E+ + + S++ +GL+ +++R Sbjct: 181 NKPELKETKHWYLPLDRYEDWLKEWILEDHKEWKSNV--YGQCKSWLDNGLQPRAVTRD- 237 Query: 214 FDWGIKIPDDPQY--IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDI 267 DWG+ +P D ++YVW DA Y++ T L P+ K +W +H IGKD Sbjct: 238 LDWGVPVPLDEAKGKVLYVWFDAPIGYISATKDL-TPEWEK--YWKDPETRMIHFIGKDN 294 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE--EVGVDA 324 + FH I +PA L + + LP V ++ F+ +G+KIS S + E + E D Sbjct: 295 IVFHCIIFPAMLKAEGSYILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLRDFEGKQDV 354 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N++L GN ++R++ + K + G++P G Sbjct: 355 LRYVLTANAPETKDNDFTWKDFQARNNSELVAIYGNFINRALVLTQKYFGGIVPERGELA 414 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 + D+ +L+ ++ + +N+ N L + ++L ++Y +PW+L KT+ R Sbjct: 415 DYDKEVLAEIPEIISRVEKNLDNFHFREGLKECMNLARLGNKYLADTEPWKLIKTDEARV 474 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 T+L + +++ L+ L + F+P A+K+ D L +A Sbjct: 475 KTILNICLQIAGDLSTLTEPFIPFSASKLRDFLNIA 510 >gi|187649790|sp|A4WCF6|SYM_ENT38 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS Length = 677 Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 130/505 (25%), Positives = 230/505 (45%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHQVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + + + S+ + DISYD++ T + + +++ ++ + G I Sbjct: 66 LGISPEQMITEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S + ++ + D KG + + A ++P + +E Sbjct: 126 SQLFD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IPD P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L + P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 302 HSLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A +D + Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIGKRFDGVM----AAELADPA 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E + + +A+ ++++L +RY D Q PW + K A + Sbjct: 418 LYKTFTDAATAIGEAWEAREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L+ + Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSER 502 >gi|332045074|gb|EGI81267.1| methionyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4] Length = 697 Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 139/506 (27%), Positives = 238/506 (47%), Gaps = 39/506 (7%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I+ A+ Y N HIGH A + AD+ AR+ RL G DV F G+DEHG I A+ GV Sbjct: 18 ITAALPYTNGPIHIGHLAGVYVPADIYARYKRLTGNDVAFICGSDEHGVPITIKAKKEGV 77 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + VD+ + +D + I++D++ RT+ K HHDT +K + DK + + Sbjct: 78 TPQQIVDRYHKIIKDSFEDFGITFDNYSRTSAKIHHDTASEFFKTLYDKNEFVEEVSEQL 137 Query: 128 YSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------------EE 162 Y + D +E G + HN + E Sbjct: 138 YDAEANQFLADRFVIGTCPKCGNEESYGDQCEKCGTSHNATDLINPKSAITGNVPTLKET 197 Query: 163 EGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 + +F L+ ++ L + E H + P +V S++ GL+ +++R DWGI +P Sbjct: 198 KHWFLPLNKHEQFLKDWILEGHKKDWKP-NVYGQVKSWIDDGLRPRAVTRD-LDWGIPVP 255 Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDILRFHAIY 274 ++YVW DA Y++ T +G +W + +H IGKD + FH I Sbjct: 256 VPGGEGKVLYVWFDAPIGYISATKEWAAREGKDWEPYWKDEDTKLVHFIGKDNIVFHCII 315 Query: 275 WPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLVR 331 +PA L + + LP V ++ F+ +G K+S S + E +++ D LRY L Sbjct: 316 FPAMLKAEGSYILPDNVPANEFLNLEGNKLSTSKNWAVWLPEYLQDFPNKQDVLRYALTA 375 Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 KD + + R N +L GN ++R V + K Y+G++P PG ++ D+ L Sbjct: 376 NAPETKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKYYNGIVPKPGEYSSVDQETL 435 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451 + + I +++ A ++++L ++Y ++PW+L KT+ +R T+++V Sbjct: 436 AAINAYPSVIESSLERYRFREASQELMNLARLGNKYLADEEPWKLIKTDGERTKTIMFVA 495 Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477 +++ LAIL + F+P + K+ IL Sbjct: 496 LQIASALAILSEPFLPFTSAKLKSIL 521 >gi|255036715|ref|YP_003087336.1| methionyl-tRNA synthetase [Dyadobacter fermentans DSM 18053] gi|254949471|gb|ACT94171.1| methionyl-tRNA synthetase [Dyadobacter fermentans DSM 18053] Length = 691 Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 146/533 (27%), Positives = 251/533 (47%), Gaps = 48/533 (9%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 ++ A+ Y N HIGH A + AD+ R+ R G DV F +GTDEHG I A+ G+ Sbjct: 11 VTAALIYANGPIHIGHLAGCYVPADIYVRYLRSSGKDVAFISGTDEHGVPITIRAKKEGL 70 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + VD+ L IS+D + RT++ HH+T R +++ + DK + + Sbjct: 71 TPQQVVDKYYEQIDASFKALGISFDIYSRTSKPVHHETSREIFRDLYDKKVFIEETTEQY 130 Query: 128 YSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWME--------------E 162 Y + + D + G + + +P++ + Sbjct: 131 YDETAQQFLADRYIVGTCPVCANPNAYGDQCERCGSTLSPLELKDPRSTLSGAKPVLKAT 190 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 + ++ L Q + +Y H E+ + + S++K GLK +++R DWGIK+P Sbjct: 191 KNWYLPLDKMQPDIEAYVNGHSEWKTNV--FGQCQSWLKDGLKPRAMTRD-LDWGIKVPV 247 Query: 222 -DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK---AKFW-PAD---------LHVIGKD 266 D ++YVW +A Y++ T +L +G+ K+W PA +H IGKD Sbjct: 248 EDTEGKVLYVWFEAPIGYISATKDWLIQKNGTDEGWKKWWQPAADASEGETKLVHFIGKD 307 Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVD 323 + FH I +PA L++ N L V ++ F+ +G+KIS S + E +EE+ D Sbjct: 308 NIVFHCIIFPAMLMAEGNYILADNVPANEFMNLEGDKISTSRNWAVWLHEYLEELPDKQD 367 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 LRY L KD + + R N++L GN ++R+V + K +G +P GA Sbjct: 368 VLRYVLTANAPETKDSEFTWKDFQTRNNSELVGIYGNFINRAVVLTQKFCEGKVPQRGAL 427 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 E D++ L + Q+I + M+N AL ++ L ++Y +PW + KT+P+R Sbjct: 428 QEIDQAALKDLAAFPQKIADAMENYRFREALTLIMDLARTGNKYLADTQPWHVIKTDPER 487 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496 +T+L + +++ L+I+ + +P A KI + L ++ +N L PG Sbjct: 488 VNTILNIALQISATLSIVSEPVLPFTAAKIQEQLGLSGKNWQDAGHADLLTPG 540 >gi|13542051|ref|NP_111739.1| methionyl-tRNA synthetase [Thermoplasma volcanium GSS1] gi|25009385|sp|Q979B7|SYM_THEVO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|14325482|dbj|BAB60386.1| tRNA synthetase Met [Thermoplasma volcanium GSS1] Length = 543 Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 149/514 (28%), Positives = 248/514 (48%), Gaps = 51/514 (9%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K+ ++ A+ Y N H+GH A + ADV RF+RL G +VL+ +G+DE+G I A+ Sbjct: 5 KILVNCALPYANGPLHVGHIAGAYLGADVFVRFNRLIGNEVLYVSGSDEYGTPITVRAEK 64 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G + + D+ + L I++D F+RTT H + + K+ ++G I KG Sbjct: 65 EGKSPQEIADRYYAEHIETFKKLGINFDIFMRTTYPEHSSVAQEFFLKLLNEGVIEKGTM 124 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPV--------QW 159 Y + + D + YK A G Q N NPV ++ Sbjct: 125 IAPYCRKIGRFMPDRYIEGECPYCGYKKARGDQCDNCGRTLDPQELINPVCILSGETPEF 184 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEF---ILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 E E +F RL ++++L + ++ + +L R +F++ GLK +++R DW Sbjct: 185 RETEHFFLRLDLFEERLEEWLKTKTFWKPNVLAYTR-----NFIQGGLKKRAITRD-IDW 238 Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP--------ADLHVIGKD 266 G+K+P + +YVW +AL Y+T G K +W + + IGKD Sbjct: 239 GVKVPLEGYEHKRIYVWFEALIGYITGAKMFSEVIG-KPNYWKEFYFDKDVKNYYFIGKD 297 Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 + FH+I WPA LL L LP + ++ ++ KGE+ SKS G E++ + D L Sbjct: 298 NIPFHSIIWPAMLLGYGELNLPYDIPANEYLTFKGEQFSKSRGIGYTVDELLRVIPPDYL 357 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 RY++ + D + + L K VN+DL + GN V R++S I K YD I P + Sbjct: 358 RYYVASILPETGDSDFSLEELVKTVNSDLIDKYGNFVHRTLSFINK-YDLKITKPNSL-- 414 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 +DE+ +E + + I R+LA ++L + YF+ +PW L KT+ D+ + Sbjct: 415 NDEA-FEYAQNAFKEYCDELSQVHIKRSLAIWLNLAIYANSYFNKSEPWNLIKTDRDQCN 473 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 LYV++++ + L ++ F P A I++ L V Sbjct: 474 YKLYVSLKLAQYLTAMIYPFTPTSAKAIWEQLGV 507 >gi|288932631|ref|YP_003436691.1| methionyl-tRNA synthetase [Ferroglobus placidus DSM 10642] gi|288894879|gb|ADC66416.1| methionyl-tRNA synthetase [Ferroglobus placidus DSM 10642] Length = 658 Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 140/503 (27%), Positives = 230/503 (45%), Gaps = 46/503 (9%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N + HIGH I ADV R+ RL G +V+F G+D HG I A+ G+ Sbjct: 4 VTCGLPYANGKAHIGHLRTYIPADVYVRYLRLRGEEVIFVCGSDSHGTPIVVNAEQQGLK 63 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 K VD ++F+++ L + +D + RT HH+ R + KK+ +KG +Y Y Sbjct: 64 PKELVDIYHKHFQEIFKSLRVEFDFYGRTDSDYHHERTREIVKKMIEKGYVYPKEIELAY 123 Query: 129 SLRDEAYYNDDEV-----YKGADGQYYNAQH--------------------NPVQWMEEE 163 E + D V Y GA+ + P + +++ Sbjct: 124 CPNCERFLPDRYVEGICPYCGAEARGDECDQGCGRHLEPGEILKPRCKICGTPAIFKKQK 183 Query: 164 GYFFRLSAYQDKLLSYYE--SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 YFF+LSA++D L Y E E L N +V+ LKD ++R +WG+K P Sbjct: 184 HYFFKLSAFKDFLEDYLEKLKGTENAL-----NYAKEWVRKELKDWCITR-NLEWGVKFP 237 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FW---PAD-LHVIGKDILRFHAIYWP 276 + ++YVW+DA Y++ T G + W AD +H IG DI+ H I+WP Sbjct: 238 GEEDLVVYVWVDAPIGYISFTEKACEKLGKDWREIWIEGKADIIHFIGLDIVYHHCIFWP 297 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV--IDPIEVIEEVGVDALRYFLVREIA 334 A L +A+ LP V + G + +G+ SKS G V +D + E D LRY++V + Sbjct: 298 AMLKAADYALPSAVVASGMVKVEGKTFSKSRGYVVWVDEDYLNEGFDPDCLRYYVVNYTS 357 Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 KD + + K++VN +L +GN + R + +++ + D ++ Sbjct: 358 HQKDLNFSWEVYKEKVNNELIATLGNFIYRVLHFAWRNFGEVK------MNVDGEVIEQI 411 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 + +I E ++ A + L S + YF +PWEL K +P+ A + + + Sbjct: 412 RLAMNKIDEAIEKWEFKEASDAFMELASYGNVYFQNAQPWELIKNDPESAERAVASCLAL 471 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 +R L IL +P KI ++ Sbjct: 472 VRALTILAYPVLPSTMEKIGKLI 494 >gi|251797136|ref|YP_003011867.1| methionyl-tRNA synthetase [Paenibacillus sp. JDR-2] gi|247544762|gb|ACT01781.1| methionyl-tRNA synthetase [Paenibacillus sp. JDR-2] Length = 551 Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 146/533 (27%), Positives = 242/533 (45%), Gaps = 66/533 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+G ++ DVLAR+ R G VL+ +G+D HG +A A G Sbjct: 4 IFIGGAWPYANGSLHLGRLASLLPGDVLARYFRAKGNPVLYVSGSDCHGTPVAVQALQEG 63 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 V+ D+ + F D L +Y+ + RT ++ HH + L+ + + G +YK Sbjct: 64 VSPGDIADRYHQEFTDCFQKLGFTYNLYTRTDQEFHHKVVKELFISLLENGYLYKKTIQQ 123 Query: 127 WYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWMEE-------------- 162 Y D + D V +G Y + +P ++ Sbjct: 124 TYCETDRRFLPDRYVEGTCPVCGNRARGDQCDYCSTLLDPADLTDKTCKICGNPPVERPT 183 Query: 163 EGYFFRLSAYQDKLLSYYESHPEF----ILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E Y+ LS +QD +LS Y H + + I +R +++ GLKD +++R WG+ Sbjct: 184 EHYYISLSLFQD-VLSEYVDHADGWKDNAVQITKR-----YLREGLKDRAVTRD-LTWGV 236 Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPADLH------VIGKDI 267 +P +D + +YVWI+A++ YL+ + + GS FW H V GKD Sbjct: 237 DVPVKGFEDKK--IYVWIEAVSGYLSASKQWAAETGGSWELFWQEGKHQLTAYYVHGKDN 294 Query: 268 LRFHAIYWPAFLLSA-NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 + FH + WPA LL A L LP ++ S ++ +G+K S S + +++ D++R Sbjct: 295 VPFHTVIWPALLLGARGLHLPDRIISCEYMTLEGKKFSTSNNWAVWVPDILSRYQPDSIR 354 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 YFL+ +D + N +L GNLV+R++S I K ++G+IP E Sbjct: 355 YFLIANGPENRDTDFSWREFIHSHNGELLGAFGNLVNRTLSFIDKSFEGLIPEGNLNDEW 414 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 ++I +R I E + A+ + + V ++YFD +KPW K + Sbjct: 415 KQTIDDCYTRSGALIEEGH----LKEAIEHIFASVRRANKYFDERKPWLQIKEDKAACGN 470 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499 L+ +V++I L+ LL F+P F +E R F +LDQ PG+ Sbjct: 471 TLHASVQIIANLSRLLNPFIP----------FACEEIRKFLTLDQ---PGWTF 510 >gi|171741863|ref|ZP_02917670.1| hypothetical protein BIFDEN_00959 [Bifidobacterium dentium ATCC 27678] gi|171277477|gb|EDT45138.1| hypothetical protein BIFDEN_00959 [Bifidobacterium dentium ATCC 27678] Length = 620 Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 157/554 (28%), Positives = 256/554 (46%), Gaps = 73/554 (13%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A Sbjct: 4 ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ + ++ +R +D+ D L +SYD F RTT H + L+ + + G IYKG Sbjct: 64 GVSAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEKVVQELFTQCLENGYIYKGTQ 122 Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158 S +L D Y G+DG + NPV + Sbjct: 123 KVAISPSTGRTLPDR-YIEGTCPICGSDGARGDQCDTCGNELDPDELINPVSKINGETPR 181 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216 + E E +F L A + L++ ++ + R VI+F K++ T DW Sbjct: 182 FEETEHFFLDLPALAEANLAWLKTREGW------RTNVINFSIGLFKEVKPRAITRDIDW 235 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVI 263 GI IP D+P +YVW DA+ YL+ + PD +A +W A + + Sbjct: 236 GIPIPVAGWIDNPNKKLYVWFDAVIGYLSASIEWARRKGEPDAWRA-WWNAPTTPGYYFM 294 Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WP+ +L+ N L +P++V + F+ +G+K S S G Sbjct: 295 GKDNITFHSQIWPSEMLAYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGI 354 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI +++ VDA+RY++ D + + N +LA GNLV+R +++ Sbjct: 355 VIYVKDILSRYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLM 414 Query: 370 LKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 K++ G IP + T+ D ++L+ + I ++N AL++ + +V ++++Y Sbjct: 415 NKNF-GEIPALDEASMTDEDRALLAETAGAFDSIGSLIENHRQKNALSEAMRVVGDINKY 473 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487 A +PW++K NP R TVL+V + + LL F+P A K+++ L Sbjct: 474 ISATEPWKIKD-NPARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLP 532 Query: 488 SLDQRL---KPGFM 498 L++ KPGFM Sbjct: 533 RLEEVEDLDKPGFM 546 >gi|320095639|ref|ZP_08027299.1| methionyl-tRNA synthetase [Actinomyces sp. oral taxon 178 str. F0338] gi|319977434|gb|EFW09117.1| methionyl-tRNA synthetase [Actinomyces sp. oral taxon 178 str. F0338] Length = 613 Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 159/530 (30%), Positives = 243/530 (45%), Gaps = 71/530 (13%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 I +A+A+P N HIGH + +DV +R+ R+ G DVL +GTDEHG I AA Sbjct: 4 ILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADGE 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY- 124 GV+ + D+N+R + L +SYD F RTT H+ + ++ + D G + + Sbjct: 64 GVSARELADRNNRLIVEDLVALGLSYDLFTRTTAGNHYRVVQDMFATVRDNGYMIEQVTR 123 Query: 125 -----SGWYSLRDEAYYNDDEVYKGADG----QYYNA--QHNPVQ--------------W 159 S +L D Y GA+G Q N Q +P + + Sbjct: 124 AAISPSTGRTLPDR-YIEGTCPICGAEGARGDQCDNCGNQLDPTELIDPRSRINGETPEF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKT-- 213 +E YF L A L + + ER R VI F K+ L+D+ T Sbjct: 183 VESTHYFLDLPALARALSDWLDER-------ERSGTWRPNVIKFSKNFLEDIRPRAMTRD 235 Query: 214 FDWGIKIP---DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HV 262 DWGI +P D P +YVW DA+ YL+ + +P+ + K+W P L + Sbjct: 236 IDWGIPVPGWEDQPTKRLYVWFDAVIGYLSASIEWARRTGDPEAWR-KWWNDPDALSYYF 294 Query: 263 IGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLG 308 +GKD + FH+ WPA LL N L LP +V S F+ +G+K S S G Sbjct: 295 MGKDNIVFHSQIWPAELLGYNGQGDRGGRPGDLGVLNLPTEVVSSEFLTMEGKKFSSSHG 354 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 VI + +E DALRYF+ D + +R N +L G GNLV+R+ SM Sbjct: 355 IVIYVRDFLERYQADALRYFISAAGPETSDSDFTWAEFVRRTNGELVAGWGNLVNRTASM 414 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428 I K + G IP PG + D ++L + +++ AL++ + LV E ++Y Sbjct: 415 IAKKF-GEIPAPGELEDIDRALLDAIEAGFATVGGLIRHHRQKAALSEAMRLVGEANKYV 473 Query: 429 DAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P++LK +R +TVL+ + + L ++L F+P AN + ++ Sbjct: 474 TDTAPFKLKAPEQRERLATVLWTLAQAVADLNLMLSPFLPHAANDVDRVM 523 >gi|330465664|ref|YP_004403407.1| methionyl-tRNA synthetase [Verrucosispora maris AB-18-032] gi|328808635|gb|AEB42807.1| methionyl-tRNA synthetase [Verrucosispora maris AB-18-032] Length = 600 Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 152/533 (28%), Positives = 240/533 (45%), Gaps = 70/533 (13%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ A+A+P N HIGH + +DV +R+ R+ G DVL +GTDEHG I A Sbjct: 3 HVLAAVAWPYANGPRHIGHVSGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPIQVQADA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + D+ +R + L +SYD F RTT + H+ + L++ + G I Sbjct: 63 EGLTPRELADRYNRVIVEDLHGLGLSYDLFTRTTTRNHYAVVQELFEGMYRNGYIVPKTT 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNA---QHNPV--------------QW 159 G S D + Y A G + Q +P+ ++ Sbjct: 123 MGAISPSTGRTLPDRYIEGTCPICGYGSARGDQCDNCGNQLDPIDLIDPKSKINGETPKF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WG 217 +E E +F L A D L + ++ + R V+ F K+ L DL T D WG Sbjct: 183 VETEHFFLDLPALADVLRQWLDTREGW------RPNVLRFSKNLLDDLQPRAITRDLEWG 236 Query: 218 IKIPDD-----PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD--------LH 261 + IP D +YVW DA+ YL+ + G ++W D + Sbjct: 237 VPIPLDDWRERTDKRIYVWFDAVIGYLSASIEWARRSGDPEAWRRWWSTDGAGKDAQAYY 296 Query: 262 VIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSL 307 +GKD + FH++ WPA L L LP +V S F+ +G K S S Sbjct: 297 FMGKDNIVFHSVIWPALLAGYSGEGSRDGEPGQLGRLNLPTEVVSSEFLTMEGRKFSSSR 356 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 VI + +E DALRYF+ D + +R N +L G GNLV+RS+S Sbjct: 357 RVVIYVRDFLERYDADALRYFIAVAGPESNDTDFTWAEFLRRNNDELVAGWGNLVNRSIS 416 Query: 368 MILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 M K++ G IP P TE+DE++L+V + + + +A+ + + +V+E + Sbjct: 417 MAAKNF-GQIPAVDPNGLTEADEALLAVARAGFTTVGDLIARHRQKQAIGEAMKVVAEAN 475 Query: 426 RYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +Y Q PW+LK + + R T+L+V ++V+ LL F+P A K+ ++L Sbjct: 476 KYLSDQAPWKLKDEADKPRMGTILHVALQVVSDANTLLTPFLPHSAQKVHELL 528 >gi|325067299|ref|ZP_08125972.1| methionyl-tRNA synthetase [Actinomyces oris K20] Length = 615 Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 156/529 (29%), Positives = 241/529 (45%), Gaps = 65/529 (12%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +I +A+A+P N HIGH + +DV +R+ R+ G DVL +GTDEHG I AA Sbjct: 3 HILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + D+N+R + L +SYD F RTT H+ + ++ + D G + + Sbjct: 63 EGLSARELADRNNRLIVEDLVALGLSYDLFTRTTAGNHYHVVQDMFTTVRDNGYMVQQVT 122 Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPV--------------Q 158 S +L D Y GADG + Q +P + Sbjct: 123 RSAISPSTGRTLPDR-YIEGTCPICGADGARGDQCDTCGNQLDPTDLISPRSRINGETPE 181 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216 ++E +F L A L ++ + E R VI F ++ L D+ T DW Sbjct: 182 FVETTHWFLDLPALAQALGAWLD---EREASGTWRPNVIKFSQNLLGDIRPRAMTRDIDW 238 Query: 217 GIKIP---DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HVIGK 265 GI +P D P +YVW DA+ YL+ + +P+ +A +W P L + +GK Sbjct: 239 GIPVPGWEDQPTKRLYVWFDAVIGYLSASVEWARRSGDPEAWRA-WWNDPQALSYYFMGK 297 Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FH+ WPA LL N L LP +V S F+ +G+K S S G VI Sbjct: 298 DNIVFHSQIWPAELLGYNGQGAAGGEPGRLGVLNLPTEVVSSEFLTMEGKKFSSSHGIVI 357 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 + +E DALRYF+ D + +R N +L G GNLV+R+ SMI K Sbjct: 358 YVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGELVAGWGNLVNRTASMIHK 417 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 + G IP P + D ++L + E + AL + + LV E ++Y Sbjct: 418 RF-GRIPEPAELEDIDRALLDAVEAGFASVGELIAQHRQKAALGEAMRLVGEANKYVADT 476 Query: 432 KPWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +P++LK +P R +TVL+ + + L ++L F+P AN + +L Sbjct: 477 QPFKLKGEDPATQARLATVLHTLAQAVTDLNLMLSPFLPHAANDVDRVL 525 >gi|167753846|ref|ZP_02425973.1| hypothetical protein ALIPUT_02131 [Alistipes putredinis DSM 17216] gi|167658471|gb|EDS02601.1| hypothetical protein ALIPUT_02131 [Alistipes putredinis DSM 17216] Length = 680 Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 141/506 (27%), Positives = 240/506 (47%), Gaps = 44/506 (8%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++A+ Y N HIGH A I +D+ R+ RL G DV+ G+DEHG I A+ GV Sbjct: 10 VTSALPYANGPVHIGHLAGVYIPSDIYTRYLRLKGYDVISVCGSDEHGVPITIKARKEGV 69 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + VD+ + + + L +S+D + RT+ K H T ++K+ D+G + + Sbjct: 70 TPQQIVDRYHQLIKSSFEGLGMSFDIYSRTSSKTHAATASEFFRKLYDEGKFIERTSEQY 129 Query: 128 YSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWMEEEG----------- 164 Y + + D D Y G + + +P + + Sbjct: 130 YDEETQTFLADRYIVGTCPRCGNDRAY-GDQCEKCGSTLSPDELINPHSAVSGSVPVKRA 188 Query: 165 ---YFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 ++ L Y+ L + E H E+ + + S++ GL+ ++SR DWGI + Sbjct: 189 TKHWYLPLDQYEGFLREWILEGHKEWKTNV--YGQCKSWLDGGLQPRAVSRD-LDWGIPV 245 Query: 221 PDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIY 274 P + ++YVW DA Y++ T L PD K +W + +H IGKD + FH I Sbjct: 246 PVEGAEGKVLYVWFDAPIGYISATKDL-TPDWEK--YWKDEETKMVHFIGKDNIVFHCIV 302 Query: 275 WPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLVR 331 +PA L + LP+ V ++ F+ +GEKIS S + E + + D LRY L Sbjct: 303 FPAMLKAHGGYILPENVPANEFLNLEGEKISTSRNWAVWLHEYLADFPGKEDVLRYVLCA 362 Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 KD + + R N +L +GN V+R++ + K +DG +P GA T+ D L Sbjct: 363 NAPETKDNDFTWKDFQARNNNELVAVLGNFVNRALVLTHKYFDGAVPACGALTDYDRETL 422 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451 S + + N++N AL + +++ ++Y +PW+L KT+P+R T+L + Sbjct: 423 RELSGAKEALENNIENYRFREALKEAMNIARLGNKYLADTEPWKLIKTDPERVKTILNIA 482 Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477 +++ L+I ++ F+P A KI +L Sbjct: 483 LQITANLSIAIEPFMPFSAKKIVGML 508 >gi|120553871|ref|YP_958222.1| methionyl-tRNA synthetase [Marinobacter aquaeolei VT8] gi|187647734|sp|A1TZ66|SYM_MARAV RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|120323720|gb|ABM18035.1| methionyl-tRNA synthetase [Marinobacter aquaeolei VT8] Length = 678 Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 130/504 (25%), Positives = 229/504 (45%), Gaps = 42/504 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K++ + +++A+ Y N H+GH E I D+ RF + G + + D HG I Sbjct: 6 KQQRDILVTSALPYANGPIHLGHLLEYIQTDIWVRFQNMRGHNCYYVCADDAHGTAIMLR 65 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G+T + +D+ + ++ I +D++ T + + +++++ D I Sbjct: 66 AEREGITPEQLIDRIRQEHQEDFAGFHIRFDNYYSTHSEENQYFSEYIYRQLKDNDHIAT 125 Query: 122 GCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM---------- 160 + ++ E + D E G + + A + P + + Sbjct: 126 RKITQFFDPEKEMFLADRFIKGTCPKCKTEDQYGDNCEACGATYTPAELINPRSAVSGAT 185 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 E E YFF+L + D L + S L + N++ ++ +GL++ +SR + Sbjct: 186 PVEKESEHYFFKLPEFHDFLSKWTRSG---ALQPQVANKLAEWLDAGLQEWDISRDAPYF 242 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRF 270 G +IPD P YVW+DA YL + L N +G FW D H IGKDI+ F Sbjct: 243 GFEIPDAPGKYFYVWLDAPIGYLASFKNLCNREGIDFEHFWKKDSSAEVYHFIGKDIINF 302 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 HA++WP+ L A P V++HGF+ G+K+SKS G I ++ + + LRY+ Sbjct: 303 HALFWPSMLHDAGFRTPTAVWAHGFVTVNGKKMSKSRGTFIMARTYLDHLDPEYLRYYFA 362 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 ++ G D + D RVN+DL + N+ SRS I K +DG + G TE D+ Sbjct: 363 AKLTGGVDDMDLNLDDFAARVNSDLVGKVVNIASRSAGFITKRFDGKL---GKVTEQDK- 418 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447 L ++I E + + RA+ +++ L ++Y + ++PW + K D+ + Sbjct: 419 -LKEFIDAGEQIAEFYEAREFGRAMRRIMELADIANQYVNDEQPWVIAKQEGQDDKLQAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLAN 471 + + R L L +PK A+ Sbjct: 478 CTNALNMFRLLMTYLAPVLPKTAD 501 >gi|253687680|ref|YP_003016870.1| methionyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259511560|sp|C6DCI4|SYM_PECCP RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|251754258|gb|ACT12334.1| methionyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 676 Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 134/504 (26%), Positives = 229/504 (45%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E + AD+ R+ R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + S+ + +ISYD++ T + + + +++ ++ + G I Sbjct: 66 MGIAPEDMIAAMSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYGRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161 S Y ++ + D KG A QY A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAADQYGDNCEVCGATYSPTELIEPKSVVSGATPE 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L A+ + L ++ S L + N++ + SGL+ ++R +G Sbjct: 185 MRDTEHFFFDLPAFSEMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271 +IPD P YVW+DA Y+ + L + G FW D H IGKDI+ FH Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDDFWKKDSDADLYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P +F HG++ G K+SKS G I ++ + D LRY+ Sbjct: 302 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K +DG + A T +D + Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGKL----ADTLADAEL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 + I E ++ RA+ ++++L +RY D Q PW + K A + Sbjct: 418 YKTFTDAAASIAEAYSSRESGRAIREIMALADIANRYVDEQAPWVVAKAEGRDADLQAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P LA + Sbjct: 478 SMGINLFRVLMTYLKPVLPSLAQR 501 >gi|15669449|ref|NP_248259.1| methionyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661] gi|2501034|sp|Q58659|SYM_METJA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|1591898|gb|AAB99269.1| methionyl-tRNA synthetase (metS) [Methanocaldococcus jannaschii DSM 2661] Length = 651 Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 133/500 (26%), Positives = 238/500 (47%), Gaps = 41/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I+TA+AY N H+GHA I AD++ ++ +L G DV+ GTD HG I A+ G Sbjct: 5 ITTALAYTNGPLHLGHARSTYIPADIIYKYLKLRGEDVIHVGGTDNHGVPITLTAEKEGK 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + V++ ++ D+L + +D F +T + H +T + + K+ + G IY+ + Sbjct: 65 SPEEIVEKYHNEIKEDLDLLGVEFDAFGKTHSQIHIETAQEFYLKLKENGYIYEKEIEQF 124 Query: 128 YSLRDEAYYNDDEV-----YKGADGQ-------------------YYNAQHNPVQWMEEE 163 Y + + D V Y G + + Y + + + Sbjct: 125 YCPNCKKFLPDRYVEGICPYCGGEARGDHCEVCGRHLEPFELKDPYCVICKGKPEIRKTK 184 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 +FF+LSA + +L Y ++ E +P +N ++++K L D +SR WG+ IP Sbjct: 185 HHFFKLSALKKELEEYIKNAKE--MPEHVKNMALNWIKE-LHDWDISR-DISWGVPIPGT 240 Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFL 279 Q +MYVW++A Y++ T L K+W H IGKDI HA++WP L Sbjct: 241 NQ-VMYVWLEAPIGYISFTKMLGE---IWKKYWLEKDTKIYHFIGKDITVHHAVFWPGML 296 Query: 280 LS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 ++ + LP V S G++ +G K+S S V+ + ++ D LRY+L+ KD Sbjct: 297 IAHGSFNLPTAVVSGGYLTLEGRKMSTSKRWVVWVKDFVKNFDADYLRYYLIMSAPLFKD 356 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRV 397 + D K ++N +L N IGN R ++ + + + I E D+ +L C Sbjct: 357 CDFSFDDFKNKINNELINIIGNFTHRVLTFTHRKFKKVPIVDEDRLKEEDKELLKKCEET 416 Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 L+ + +N+++ AL ++ L E + YF +PW + + +R +LY + ++ Sbjct: 417 LEAVDKNIRSFKFRDALVNILHLAIEGNSYFQKMEPWAV--DDEERLKEILYTCCKTVKT 474 Query: 458 LAILLQAFVPKLANKIFDIL 477 L LL ++PK + + +++ Sbjct: 475 LVYLLYPYMPKKSLALLELM 494 >gi|305665495|ref|YP_003861782.1| methionyl-tRNA synthetase [Maribacter sp. HTCC2170] gi|88710251|gb|EAR02483.1| methionyl-tRNA synthetase [Maribacter sp. HTCC2170] Length = 698 Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 148/536 (27%), Positives = 254/536 (47%), Gaps = 56/536 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 +K + I+ A+ Y N HIGH A + AD+ AR+ RL G DV F G+DEHG I+ Sbjct: 5 IKSPARYTITAALPYTNGPIHIGHLAGVYVPADIYARYQRLIGKDVAFVCGSDEHGVAIS 64 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T K +D+ + I++D++ RT+ K HH T + K+ ++GD Sbjct: 65 MKAKKEGITPKDVIDKYHAIIKKSFVDFGITFDNYSRTSAKIHHKTASDFFVKLHEQGDF 124 Query: 120 YKGCYSGWYSLRDEAYYNDDEVY----KGADGQYYNAQH-------------NPVQWM-- 160 + + Y + + D V K + + Y Q NP + Sbjct: 125 IEETTAQLYDEEAQQFLADRFVIGTCPKCGNEEAYGDQCENCGSSLNATDLINPKSTITG 184 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN-------EVISFVKSGLKDL 207 E + +F L Y+D L E+IL +++ + S++ GLK Sbjct: 185 AIPTLKETKHWFLPLDRYEDFL-------KEWILKGHKKDWKPNVYGQCKSWIDDGLKPR 237 Query: 208 SLSRKTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----L 260 +++R DWGI +P ++YVW DA Y+++T +G + + D L Sbjct: 238 AVTRD-LDWGIPVPVKGGEGKVLYVWFDAPIGYISSTKEWAEREGKDWEPYWKDKDTKLL 296 Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 H IGKD + FH I +P+ L + + LP+ V ++ F+ +G K+S S + E +EE Sbjct: 297 HFIGKDNIVFHCIIFPSILKAQGDYILPENVPANEFLNLEGNKLSTSKNWAVWLHEYLEE 356 Query: 320 VG--VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 D LRY L KD + + R N +L +GN ++R V + K YDG++ Sbjct: 357 FPDMQDVLRYTLTANAPETKDNDFTWKDFQARNNNELVAILGNFINRVVVLTNKYYDGVV 416 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P P F++ DE L+ R + I +++ A ++++L ++Y ++PW++ Sbjct: 417 PEPSNFSKVDEETLAELKRYPEIISGSIERYRFREASQELMNLARLGNKYLADEEPWKVI 476 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-----DENRCFQS 488 K + +R T++YV +++ L++L + F+P ++K+ IL V+ ENR S Sbjct: 477 KEDAERVQTIMYVALQIATGLSVLCEPFLPFTSDKLKRILNVSSSDSTSENRIENS 532 >gi|86134855|ref|ZP_01053437.1| Methionyl-tRNA synthetase [Polaribacter sp. MED152] gi|85821718|gb|EAQ42865.1| Methionyl-tRNA synthetase [Polaribacter sp. MED152] Length = 684 Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 140/515 (27%), Positives = 245/515 (47%), Gaps = 41/515 (7%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M ++ I+ A+ Y N HIGH A + AD+ AR+ RL G DV + +G+DEHG I Sbjct: 1 MSAPKRYTITAALPYTNGPIHIGHLAGVYVPADIYARYLRLKGKDVAYISGSDEHGVAIP 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ GVT + +D+ + + IS+D++ RT+ + HH T + K+ ++GD Sbjct: 61 MRAKKEGVTPQNIIDKYHTIIKKSFEDFGISFDNYSRTSSEIHHKTASDFFIKMYNEGDF 120 Query: 120 YKGCYSGWYSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWM------- 160 + + Y + + D +E Y G + HN + Sbjct: 121 IEEVTAQLYDAEADQFLADRFVVGTCPKCGFEESY-GDQCENCGTSHNATDLISPKSAIT 179 Query: 161 -------EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212 E + +F L ++D L + E H + P +V S+V GL+ +++R Sbjct: 180 GNVPTVKETKHWFLPLDKHEDFLRKWILEGHKKDWKP-NVYGQVKSWVDDGLRPRAVTRD 238 Query: 213 TFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGK 265 DWGI +P + ++YVW DA Y+++T +G + +W D +H IGK Sbjct: 239 -LDWGIPVPVEGAEGKVLYVWFDAPIGYISSTKEWAEREGKNWEDYWKKDDTKLVHFIGK 297 Query: 266 DILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GV 322 D + FH I +P+ L + + LP V ++ F+ +G K+S S + E +E+ Sbjct: 298 DNIVFHCIIFPSMLKAHGDYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEDFPNQQ 357 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D LRY L KD + + + N +L GN ++R V + K Y G +PTP Sbjct: 358 DVLRYTLTANAPESKDNDFTWKDFQAKNNNELVAIFGNFINRVVVLTNKYYTGAVPTPND 417 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 FTE DE +L+ I ++++ A ++++L ++Y ++PW++ K + + Sbjct: 418 FTEVDEDVLAAVKEFPNVIGKSIERYRFREASQELMNLARLGNKYLADEEPWKVIKVDEE 477 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 R T++YV +++ LA++ + F+P + K+ IL Sbjct: 478 RVKTIMYVALQISAALAVVAEPFLPFTSTKLKGIL 512 >gi|261822290|ref|YP_003260396.1| methionyl-tRNA synthetase [Pectobacterium wasabiae WPP163] gi|261606303|gb|ACX88789.1| methionyl-tRNA synthetase [Pectobacterium wasabiae WPP163] Length = 676 Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 133/504 (26%), Positives = 228/504 (45%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E + AD+ R+ R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + S+ + +ISYD++ T + + + ++++++ + G I Sbjct: 66 MGIAPEQMIAAMSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYRRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160 S Y ++ + D KG A QY A ++P + + Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAAEQYGDNCEVCGATYSPTELIEPKSAVSGATPE 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A+ D L ++ S L + N++ + SGL+ ++R +G Sbjct: 185 MRESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271 ++PD P YVW+DA Y+ + L + G FW D H IGKDI+ FH Sbjct: 242 EVPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDDFWKKDSDADLYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P +F HG++ G K+SKS G I ++ + D LRY+ Sbjct: 302 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K +DG + A D + Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGKL----ADKLVDPDL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 + I E ++ RA+ ++++L +RY D Q PW + K A + Sbjct: 418 YKTFTDAAASIAEAYNSRESGRAIREIMALADIANRYVDEQAPWVVAKAEGRDADLQAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P LA + Sbjct: 478 SMGINLFRVLMTYLKPVLPSLAQR 501 >gi|56459820|ref|YP_155101.1| methionyl-tRNA synthetase [Idiomarina loihiensis L2TR] gi|68565965|sp|Q5R0G6|SYM_IDILO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|56178830|gb|AAV81552.1| Methionyl-tRNA synthetase [Idiomarina loihiensis L2TR] Length = 677 Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 141/513 (27%), Positives = 224/513 (43%), Gaps = 54/513 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N HIGH I AD+ RF +L G + F D HG I AQ Sbjct: 7 KILVTNALPYANGPIHIGHMLGYIQADIWVRFQKLRGNECHFVCADDAHGTPIMLKAQQL 66 Query: 66 GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + R+ D +D L + +D + T + + ++ ++ G I Sbjct: 67 GITPEQMIGDMQRSHESDFSDFL-VGFDHYYSTHSDENRELAETIYTRLDKAGHIKTKVI 125 Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPV--------------QW 159 Y + E + D V GA+ QY A + P + Sbjct: 126 EQLYDPQKEMFLPDRFVKGECPDCGAEDQYGDNCDVCGATYAPTDLKNPKSVVSGAEPEL 185 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E YFF L A+ D L S+ S L E N++ + + GL+ +SR +G K Sbjct: 186 RESEHYFFDLPAFGDMLKSWTRSGS---LQNEMANKLNEWFEQGLQRWDISRDAPYFGFK 242 Query: 220 IPDDPQYIMYVWIDA-------LTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267 IP YVW+DA NY +TTG D +W AD H IGKDI Sbjct: 243 IPGTENKYFYVWLDAPIGYMSSFKNYCSTTGKAD-----WDTYWQADSEAELYHFIGKDI 297 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FH+++WPA L A+ P V++HGFI G K+SKS G I +E + + LRY Sbjct: 298 IYFHSLFWPAMLKGADFRQPTNVWAHGFITVNGTKMSKSKGTFIKARTYLEHLDPEYLRY 357 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ D + +RVN+DL + N+ SR I K +DG + + A Sbjct: 358 YFAAKLTSRIDDLDLNLTDFAQRVNSDLVGKVINIASRCAGFIQKKFDGRLSSNVA---- 413 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL--KKTNPDRA 444 D ++L I E + + RA+ +++L ++Y ++PW+L ++ + Sbjct: 414 DSALLEDFQLAGDNIAELYEKREFSRAMRDIMALADRANQYIADKEPWQLIKQEGSEQEV 473 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + + + R L + L VPKL ++ L Sbjct: 474 HEICSLGINLFRVLMVYLAPVVPKLTEEVQSFL 506 >gi|227113133|ref|ZP_03826789.1| methionyl-tRNA synthetase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 676 Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 133/504 (26%), Positives = 228/504 (45%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E + AD+ R+ R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + S+ + +ISYD++ T + + + +++ ++ + G I Sbjct: 66 MGIAPEQMIAAMSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYGRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161 S Y ++ + D KG A QY A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAADQYGDNCEVCGATYSPTELIEPKSVVSGATPE 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L A+ + L ++ S L + N++ + SGL+ ++R +G Sbjct: 185 MRETEHFFFDLPAFSEMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271 +IPD P YVW+DA Y+ + L + G FW D H IGKDI+ FH Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDDFWKKDSDADLYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P +F HG++ G K+SKS G I ++ + D LRY+ Sbjct: 302 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K +DG + A +D + Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGKL----ADKLADAEL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVL 448 + I E N+ RA+ ++++L +RY D Q PW + K + + Sbjct: 418 YKTFTDAATSIAEAYNNRESGRAIREIMALADIANRYVDEQAPWVVAKAEGRDEDLQAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P LA + Sbjct: 478 SMGINLFRVLMTYLKPVLPSLAQR 501 >gi|283456940|ref|YP_003361504.1| methionyl-tRNA synthetase [Bifidobacterium dentium Bd1] gi|283103574|gb|ADB10680.1| MetG Methionyl-tRNA synthetase [Bifidobacterium dentium Bd1] Length = 615 Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 157/552 (28%), Positives = 255/552 (46%), Gaps = 73/552 (13%) Query: 9 ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A GV Sbjct: 1 MNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKEGV 60 Query: 68 TTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY-- 124 + + ++ +R +D+ D L +SYD F RTT H + L+ + + G IYKG Sbjct: 61 SAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEKVVQELFTQCLENGYIYKGTQKV 119 Query: 125 ----SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------QWM 160 S +L D Y G+DG + NPV ++ Sbjct: 120 AISPSTGRTLPDR-YIEGTCPICGSDGARGDQCDTCGNELDPDELINPVSKINGETPRFE 178 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218 E E +F L A + L++ ++ + R VI+F K++ T DWGI Sbjct: 179 ETEHFFLDLPALAEANLAWLKTREGW------RTNVINFSIGLFKEVKPRAITRDIDWGI 232 Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGK 265 IP D+P +YVW DA+ YL+ + PD +A +W A + +GK Sbjct: 233 PIPVAGWIDNPNKKLYVWFDAVIGYLSASIEWARRKGEPDAWRA-WWNAPTTPGYYFMGK 291 Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FH+ WP+ +L+ N L +P++V + F+ +G+K S S G VI Sbjct: 292 DNITFHSQIWPSEMLAYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGIVI 351 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 +++ VDA+RY++ D + + N +LA GNLV+R +++ K Sbjct: 352 YVKDILSRYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLMNK 411 Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 ++ G IP + T+ D ++L+ + I ++N AL++ + +V ++++Y Sbjct: 412 NF-GEIPALDEASMTDEDRALLAETAGAFDSIGSLIENHRQKNALSEAMRVVGDINKYIS 470 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489 A +PW++K NP R TVL+V + + LL F+P A K+++ L L Sbjct: 471 ATEPWKIKD-NPARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLPRL 529 Query: 490 DQRL---KPGFM 498 ++ KPGFM Sbjct: 530 EEVEDLDKPGFM 541 >gi|157369816|ref|YP_001477805.1| methionyl-tRNA synthetase [Serratia proteamaculans 568] gi|187647768|sp|A8GC37|SYM_SERP5 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|157321580|gb|ABV40677.1| methionyl-tRNA synthetase [Serratia proteamaculans 568] Length = 675 Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 131/504 (25%), Positives = 229/504 (45%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +KL ++ A+ Y N H+GH E I AD+ R+ R+ G +V F D HG I AQ Sbjct: 6 KKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNEVHFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + S+ + ISYD++ T + + +++ ++ + G I Sbjct: 66 LGIKPEEMIAEMSQEHQQDFAGFGISYDNYHSTHSDENRELSNLIYGRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + ++ Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 LRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271 +IPD P YVW+DA Y+ + L + G +FW D H IGKDI+ FH Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLDFDEFWRKDSTTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L +N P +F HG++ G K+SKS G I ++ + D LRY+ Sbjct: 302 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K + G + A +D ++ Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFGGQL----ADKLADPAL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 Q I E ++ RA+ ++++L +RY D Q PW + K A + Sbjct: 418 YQTFVDAAQSIAEAYASRESGRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 478 SMGINLFRVLMTYLKPVMPSLTER 501 >gi|325286637|ref|YP_004262427.1| Methionyl-tRNA synthetase [Cellulophaga lytica DSM 7489] gi|324322091|gb|ADY29556.1| Methionyl-tRNA synthetase [Cellulophaga lytica DSM 7489] Length = 692 Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 144/519 (27%), Positives = 245/519 (47%), Gaps = 39/519 (7%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + I+ A+ Y N HIGH A + AD+ AR+ R DV F G+DEHG I+ Sbjct: 6 KTPSRYTITAALPYTNGPIHIGHLAGVYVPADIYARYLRGINKDVAFVCGSDEHGVAISM 65 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T K +D+ + I++D++ RT+ + HHDT +K + DKGD Sbjct: 66 KAKKEGITPKQVIDKYHAIIKKSFLDFGITFDNYSRTSAQVHHDTASEFFKNLYDKGDFI 125 Query: 121 KGCYSGWYSLRDEAYYNDDEVY----KGADGQYYNAQH-------------NPVQWM--- 160 + Y + + D V K + Y Q NP + Sbjct: 126 EETTEQLYDAEAKQFLADRFVIGTCPKCGHEEAYGDQCENCGSTLSATELINPKSTVSGA 185 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + +F L Y+D L + E H P + S++ GLK +++R Sbjct: 186 VPTLKETKHWFLPLDRYEDFLKEWILEGHKNDWKP-NVYGQCKSWIDDGLKPRAVTRD-L 243 Query: 215 DWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDI 267 DWGI +P ++YVW DA Y+++T +G +W + LH IGKD Sbjct: 244 DWGIPVPVPGGEGKVLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDENTKMLHFIGKDN 303 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324 + FH I +P+ L + + LP+ V ++ F+ +G K+S S + E +E+ D Sbjct: 304 IVFHCIIFPSMLKAHGDFILPENVPANEFLNLEGNKLSTSKNWAVWLHEYLEDFPDMQDV 363 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N +L GN ++R V + K Y+G++PTP F+ Sbjct: 364 LRYTLTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKYYNGVLPTPATFS 423 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 E D++ L + + I +++ A ++++L ++Y ++PW++ K + +R Sbjct: 424 EIDKATLEEVKKYPEIISSSLERYRFREAGQELMNLARLGNKYLADEEPWKVIKQDEERV 483 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 T++YV +++ LA+L + F+P ++K+ +IL V+ N Sbjct: 484 KTIMYVALQIASALAVLSEPFLPFTSDKLKNILNVSAAN 522 >gi|332169738|gb|AEE18993.1| methionyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5] Length = 695 Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 141/514 (27%), Positives = 234/514 (45%), Gaps = 47/514 (9%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ I+ A+ Y N HIGH A + AD+ AR+ R+ G DV F G+DEHG I A+ Sbjct: 6 QRYTITAALPYTNGPIHIGHLAGVYVPADIYARYQRMQGADVAFICGSDEHGVPITIKAK 65 Query: 64 NAGVTTKVFVDQNS----RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 GVT + VD+ + ++F D I++D++ RT+ K HHDT +K + D+G Sbjct: 66 KEGVTPQDVVDKYNAIIIKSFEDFG----ITFDNYSRTSAKIHHDTASEFFKNMYDQGKF 121 Query: 120 YKGCYSGWYSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWM------- 160 + Y + D +E Y G + HN + Sbjct: 122 IEETNEQLYDAEANQFLADRFVTGTCPKCGFEEAY-GDQCESCGTSHNATDLINPKSAIT 180 Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 E + +F L Y D + + + S++ GL+ +++R Sbjct: 181 GAVPTLKETKHWFLPLDQYNDFFKEWIIEGHKKDWKTNVYGQCKSWIDDGLRPRAVTRD- 239 Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKD 266 DWGI +P + ++YVW DA Y+++T +G +W + LH IGKD Sbjct: 240 LDWGIPVPVEGAEGKVLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDENTKLLHFIGKD 299 Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVD 323 + FH + +PA L LP V ++ F+ +G K+S S + E +EE D Sbjct: 300 NIVFHCLIFPAMLKGHGEYILPDNVPANEFLNLEGRKLSTSKNWAVWLHEYLEEFPDQQD 359 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 LRY L KD + + R N++L GNL++R + K Y G++PTPG F Sbjct: 360 VLRYVLTANAPESKDNDFTWKDFQTRNNSELVAIFGNLINRVTVLTHKYYGGVVPTPGTF 419 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 E D+ +L I +++ + A+ ++L ++Y ++PW+ KT+ +R Sbjct: 420 NELDKEVLDAIKAYPAVIGSSIEKYRFRESQAEFMNLARLGNKYLADEEPWKTIKTDEER 479 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 TV+YV +++ LAIL + +P + + +IL Sbjct: 480 TKTVMYVALQIATALAILSEPLLPHTSVTLKNIL 513 >gi|264679983|ref|YP_003279892.1| methionyl-tRNA synthetase [Comamonas testosteroni CNB-2] gi|262210498|gb|ACY34596.1| methionyl-tRNA synthetase [Comamonas testosteroni CNB-2] Length = 715 Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 151/524 (28%), Positives = 238/524 (45%), Gaps = 50/524 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL+++TA+ Y N HIGH E I AD R R+ G V F D HG I AA+ A Sbjct: 5 KLFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVNFVGADDAHGAPIMIAAEKA 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T + FV + + D I++D++ T +H+ + ++ + G I Sbjct: 65 GKTPQQFVADIAAGRKQYLDGFHIAFDNWSNTDSAENHELSKQIYLDLKKAGFIETRTIE 124 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161 ++ ++ + D KG A QY + NP + Sbjct: 125 QFFD-PEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCSSVYAPTDLINPFSALSGATPVM 183 Query: 162 --EEGYFFRLSAYQD-KLLSYYESH-----PEFILPIER----RNEVISFVKSGLKDLSL 209 E +FF+LS + + L+ + + PE I+ R GL D + Sbjct: 184 KSSEHFFFKLSDPRAVEFLTEWTQNGKHVQPEVAAKIKEWFGVRTNPDGSTSEGLDDWDI 243 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264 SR +GI+IPD P YVW+DA YL + L N G + AD H IG Sbjct: 244 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKELLNRRGEDYDAYMADPDLEQYHFIG 303 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIE-EVGV 322 KDI+ FH ++WPA L + P ++ HGF+ ++ GEK+SKS G +DP++ + ++ Sbjct: 304 KDIITFHTLFWPAMLKFSGRKTPTRICVHGFMTVNNGEKMSKSRGTGLDPLKYLSLKMNP 363 Query: 323 DALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + LRY+L ++ +D ++ + RVN+DL N+ SR+ I K +DG + G Sbjct: 364 EWLRYYLGAKLNGKNEDIDFNPEDFMLRVNSDLIGKYVNIASRAAGFISKRFDGRL---G 420 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTN 440 +E +++L+ I + + RA +++ L +V+ Y DA KPWEL KK Sbjct: 421 QVSEDGQALLAALREQQAAIVAAYEARDSARAAREIMLLCDKVNSYVDANKPWELAKKEG 480 Query: 441 PD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 D R V +E R L I L +P +A ++ L V E+ Sbjct: 481 MDARLHDVCTTCIEAFRILTIYLSPILPGVAAEVARFLIVPPES 524 >gi|219847897|ref|YP_002462330.1| methionyl-tRNA synthetase [Chloroflexus aggregans DSM 9485] gi|254782858|sp|B8G6F7|SYM_CHLAD RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|219542156|gb|ACL23894.1| methionyl-tRNA synthetase [Chloroflexus aggregans DSM 9485] Length = 600 Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 148/530 (27%), Positives = 245/530 (46%), Gaps = 64/530 (12%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E + ++ A Y N HIGH + AD+ AR+HRL G VL +GTDEHG I A Sbjct: 3 EHILVAVAWPYANGPRHIGHVAGFGVPADIFARYHRLRGNRVLMVSGTDEHGTPITLVAD 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + D+ ++ D L +SYD F RTT H+ + +++ + ++G I + Sbjct: 63 KEGTTPQAIADRYNKIIGDDLYNLGLSYDTFTRTTTANHYAVTQDIFRTLYERGYIIRQE 122 Query: 124 YSGWYSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWME---------- 161 G +S D DE +G +Q +P + Sbjct: 123 TLGAFSATTGRTLPDRYIEGTCPLCGYDEA-RGDQCDNCGSQLDPTDLINPRSKVDGQPP 181 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 E +F L A+ ++L + + + RN ++F+K LK +++R +WG Sbjct: 182 VFKPTEHFFLDLPAFAEQLHDWINRQDHWRPNV--RNFSLNFLKD-LKPRAITRD-LEWG 237 Query: 218 IKIPDDPQYI------MYVWIDALTNYLTTT-GYLDN---PDGSKAKFWPAD---LHVIG 264 + IP P+Y +YVW DA+ YL+ + + N PD + + D + +G Sbjct: 238 VPIPL-PEYANRDDKKIYVWFDAVIGYLSASIEWAQNSGQPDAWREWWQNPDARHFYFMG 296 Query: 265 KDILRFHAIYWPAFLLSAN-----------------LPLPKKVFSHGFILHKGEKISKSL 307 KD + FH + WPA LL L LP V S F+ +G+K S S Sbjct: 297 KDNIVFHTVIWPAMLLGYGAGGQFGADPGGKYDGIPLQLPYNVVSSEFLTMEGKKFSSSR 356 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 G VI + + DALRYFL +D + +R N +L GNLV+R++S Sbjct: 357 GIVIYVNDFLSRYDADALRYFLTIAGPENQDTDFTWAEFVRRNNDELVATWGNLVNRTLS 416 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 + K++ G +P PG T DE +L+ + ++ + E + ALA+ + L ++V+ Y Sbjct: 417 NVYKNF-GSVPQPGPLTPVDEQVLAEVTGGIETVGELLAAARFKAALAEAMRLAAQVNIY 475 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Q+PW++ K++ +RA+T+ YV + + L I+ F+P + ++ + L Sbjct: 476 LSEQEPWKVIKSDHERAATIWYVALRCVDTLKIIFTPFLPFSSQRLHEYL 525 >gi|237808288|ref|YP_002892728.1| methionyl-tRNA synthetase [Tolumonas auensis DSM 9187] gi|259511563|sp|C4LEX5|SYM_TOLAT RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|237500549|gb|ACQ93142.1| methionyl-tRNA synthetase [Tolumonas auensis DSM 9187] Length = 675 Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 137/501 (27%), Positives = 226/501 (45%), Gaps = 42/501 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ A+ Y N H+GH E + AD+ RF R+ G ++ F D HG I AQ G Sbjct: 8 ILVTCALPYANGSIHLGHMLEHVQADIWVRFQRMRGHNIHFICADDAHGTPIMLKAQQLG 67 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + + S+ + IS+D++ T + +++ K+ D G I S Sbjct: 68 ITPEEMIAAVSQEHQTDFAGFKISFDNYHSTHSDENRYFSELIYTKLKDNGFIKSKTISQ 127 Query: 127 WYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM--------------E 161 Y + D V G + + A ++P + + E Sbjct: 128 LYDPEKNMFLPDRFVKGTCPKCKAVDQYGDNCEVCGATYSPTELINPKSAVSGATPVMKE 187 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 E +FF L + D L ++ S L E N++ + SGL ++R +G +IP Sbjct: 188 TEHFFFDLPQFADMLQAWTTSG---ALQEEISNKLNEWFTSGLHQWDITRDAPYFGFEIP 244 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWP----ADL-HVIGKDILRFHAIY 274 P YVW+DA Y+ + L + G FW A+L H IGKDI+ FH+++ Sbjct: 245 GAPGKFFYVWLDAPIGYMGSFKNLCDKRGDIDFDAFWSQNSDAELYHFIGKDIVYFHSLF 304 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L A P +F HG++ G K+SKS G I ++ + + LRY+ ++ Sbjct: 305 WPAMLDGAGFRKPSNIFVHGYVTVNGAKMSKSRGTFIKASTYLQHLDPECLRYYYAAKLN 364 Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + D RVN+D+ N + NL SR+ I K DG + A T S+ ++ + Sbjct: 365 NRIDDLDLNLDDFVARVNSDVVNKLVNLASRTAGFITKRLDGKL----ADTLSEPALYAT 420 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451 + + I E +N+ RA+ ++++L E +RY D + PW + K A S V T Sbjct: 421 FTSASERIAEAYENREFSRAIREIMALADEANRYVDEKAPWVIAKQEGQEAELSAVCSTT 480 Query: 452 VEVIRQLAILLQAFVPKLANK 472 + + R L L+ +P+LA + Sbjct: 481 LNLFRVLMTYLKPVMPELAAR 501 >gi|145588832|ref|YP_001155429.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047238|gb|ABP33865.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 556 Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 151/526 (28%), Positives = 234/526 (44%), Gaps = 57/526 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + +L +++A+ Y N Q HIGH E + D+ R+ R+ G +V + D HG I A+ Sbjct: 5 QRRLLVTSALPYANGQIHIGHLVEYVQTDIWVRYQRMRGHEVHYVGADDTHGTPIMLRAE 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K + + + D IS+D++ T + + ++ K+ D G I K Sbjct: 65 KEGITPKELIANVWKEHKRDFDNFLISFDNYYTTDSPENEKLAQSIYLKLRDAGLIEKRA 124 Query: 124 YSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWME----------- 161 Y E + D E K GA QY A ++P Sbjct: 125 IEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEKCGATYSPTDLKNPFSVVSGATPI 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214 + YFF+LS + + + + L E RN++ +V S L D +SR Sbjct: 185 KKVSDHYFFKLSDPRCETFLREWTQVKTPLQPEARNKMKEWVGEPGDSKLGDWDISRDAP 244 Query: 215 DWGIKIPDDPQYIMYVWIDA-------LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267 +G +IPD P YVW+DA NY G L+ + K H IGKDI Sbjct: 245 YFGFEIPDAPGKYFYVWLDAPIGYYASFLNYCQAKG-LNFEEWVKPDTTTEQYHFIGKDI 303 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALR 326 L FH ++WPA L A P VF+HGF+ GEK+SKS G +I VIE + R Sbjct: 304 LYFHTLFWPATLQFAGYRTPTNVFAHGFLTVDGEKMSKSRGTLISANSVIECGFNPEWFR 363 Query: 327 YFLVREIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 Y+ ++ D D D RVN+DL N+ SRS ++K +DG++ Sbjct: 364 YYFATKL---NDSMEDLDLNLQDFVARVNSDLLGKYINIASRSAGFLVKRFDGVVSDAAM 420 Query: 383 FTESDESILSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 + I + ++ L E RE +AL ++ L +V+ + D KPWE+ K N Sbjct: 421 SNPLLQEIAAASEKIAGLYEARE------YAKALRTIMDLADKVNAFVDENKPWEIAK-N 473 Query: 441 PDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 P+R + TV VT+E R L + L+ +P++A + + + +N Sbjct: 474 PEREADLQTVCSVTLEAFRMLTLYLKPVIPQVAAGVEEFFSLEPQN 519 >gi|306824171|ref|ZP_07457542.1| methionine--tRNA ligase [Bifidobacterium dentium ATCC 27679] gi|309801107|ref|ZP_07695237.1| methionine--tRNA ligase [Bifidobacterium dentium JCVIHMP022] gi|304552559|gb|EFM40475.1| methionine--tRNA ligase [Bifidobacterium dentium ATCC 27679] gi|308222333|gb|EFO78615.1| methionine--tRNA ligase [Bifidobacterium dentium JCVIHMP022] Length = 620 Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 156/554 (28%), Positives = 255/554 (46%), Gaps = 73/554 (13%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A Sbjct: 4 ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ + ++ +R +D+ D L +SYD F RTT H + L+ + + G IYKG Sbjct: 64 GVSAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEKVVQELFTQCLENGYIYKGTQ 122 Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158 S +L D Y G+DG + NPV + Sbjct: 123 KVAISPSTGRTLPDR-YIEGTCPICGSDGARGDQCDTCGNELDPDELINPVSKINGETPR 181 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216 + E E +F L A + L++ ++ + R VI+F K++ T DW Sbjct: 182 FEETEHFFLDLPALAEANLAWLKTREGW------RTNVINFSIGLFKEVKPRAITRDIDW 235 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVI 263 GI IP D+P +YVW DA+ YL+ + PD +A +W + + Sbjct: 236 GIPIPVAGWIDNPNKKLYVWFDAVIGYLSASIEWARRKGEPDAWRA-WWNDPTTPGYYFM 294 Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WP+ +L+ N L +P++V + F+ +G+K S S G Sbjct: 295 GKDNITFHSQIWPSEMLAYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGI 354 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI +++ VDA+RY++ D + + N +LA GNLV+R +++ Sbjct: 355 VIYVKDILSRYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLM 414 Query: 370 LKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 K++ G IP + T+ D ++L+ + I ++N AL++ + +V ++++Y Sbjct: 415 NKNF-GEIPALDEASMTDEDRALLAETAGAFDSIGSLIENHRQKNALSEAMRVVGDINKY 473 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487 A +PW++K NP R TVL+V + + LL F+P A K+++ L Sbjct: 474 ISATEPWKIKD-NPARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLP 532 Query: 488 SLDQRL---KPGFM 498 L++ KPGFM Sbjct: 533 RLEEVEDLDKPGFM 546 >gi|261343413|ref|ZP_05971058.1| methionine--tRNA ligase [Providencia rustigianii DSM 4541] gi|282568556|gb|EFB74091.1| methionine--tRNA ligase [Providencia rustigianii DSM 4541] Length = 675 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 136/513 (26%), Positives = 234/513 (45%), Gaps = 44/513 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ R+ G +V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G++ + + ++ ++ ISYD++ T + + +++ K+ + G I S Sbjct: 67 GISPEEMIAAMNQEHQNDFAGFQISYDNYHSTHSEENKQLSEMIYGKLKNNGFIKSKTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160 Y ++ + D KG A+ QY +A ++P + + Sbjct: 127 QLYD-PEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPTELINPRSVVSGATPVM 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E +FF L A+ D L ++ S L + N++ + +SGL ++R + +G + Sbjct: 186 RETEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLHQWDITRDSPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHA 272 IPD P YVW+DA Y+ + L + G +FW D H IGKDI+ FH+ Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDEFWNKDSKTDLYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L +N P +F HG++ G K+SKS G I ++ + D LRY+ + Sbjct: 303 LFWPAMLEGSNYRKPTNLFVHGYVTVNGAKMSKSRGTFITARSYLDNLDADCLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 ++ D + + +RVN+D+ N + NL SR+ I K + G + A E + + Sbjct: 363 LSSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFIAKRFSGKLSANLAEPELYQQFV 422 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLY 449 Q I + N+ +A+ ++++L +RY D + PW + K + Sbjct: 423 DAA----QVIGDAYTNREYGKAVREIMALADIANRYVDEKAPWVVAKQEGKDQELQDICS 478 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + + + R L L+ +P L + D L V E Sbjct: 479 MGINLFRVLMTYLKPVLPSLTQRAEDFLNVKLE 511 >gi|293396970|ref|ZP_06641244.1| methionine-tRNA ligase [Serratia odorifera DSM 4582] gi|291420441|gb|EFE93696.1| methionine-tRNA ligase [Serratia odorifera DSM 4582] Length = 676 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 130/504 (25%), Positives = 230/504 (45%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +KL ++ A+ Y N H+GH E I AD+ R+ R+ G +V F D HG I AQ Sbjct: 6 KKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNEVHFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + S+ + ISYD++ T + + +++ ++ + G I Sbjct: 66 MGIKPEEMIAEMSQEHQQDFAGFGISYDNYHSTHSDENRELSSLIYGRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + ++ Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSAVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271 +IPD P YVW+DA Y+ + L + G +FW D H IGKDI+ FH Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLDFDEFWRKDSTTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L +N P +F HG++ G K+SKS G I ++ + D LRY+ Sbjct: 302 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K + G + A + +D ++ Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFGGKL----AASLADPAL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 + I E ++ RA+ ++++L +RY D Q PW + K A + Sbjct: 418 YQTFTDAADSIAEAYASRESGRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 478 SMGINLFRVLMTYLKPVLPSLTER 501 >gi|312199898|ref|YP_004019959.1| methionyl-tRNA synthetase [Frankia sp. EuI1c] gi|311231234|gb|ADP84089.1| methionyl-tRNA synthetase [Frankia sp. EuI1c] Length = 580 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 147/522 (28%), Positives = 237/522 (45%), Gaps = 64/522 (12%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 ++ A Y N PH+GH A + AD+ AR+ R+ G VL +G+D HG I A+ G+ Sbjct: 33 VAVAWPYANGAPHLGHIAGAYLPADIFARYQRMAGRRVLMVSGSDAHGTPITVRAEEEGI 92 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + VD+ F D+ + L IS+D F T H + ++ ++ G I + + Sbjct: 93 TPQQVVDRYHPIFLDIWERLGISFDLFTSTRTDNHTAVTQDVFTRLRAAGYISVQETTQF 152 Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWMEEEG------------ 164 Y + + D V Y A G Q N +P Q +E Sbjct: 153 YDPQAGRFLPDRYVVGTCPHCAYPSARGDQCENCGRTLDPDQLIEPRSKMTGAVPEQRRT 212 Query: 165 --YFFRLSAYQDKLLSYYESHPEFILPIERR---NEVISFVKSGLKDLSLSRKTFDWGIK 219 +F LS ++ LL++ E+ + RR N + FVK GL D +++R DWG+ Sbjct: 213 SHFFLDLSKLEEPLLAWLETRTGW-----RRHVINWSLQFVKDGLHDRAITRD-LDWGVP 266 Query: 220 IPDD---PQYIMYVWIDALTNYLTTTG---------------YLDNPDGSKAKFWPADLH 261 +P D P +YVW +A+ YL+ + + +NPD + F Sbjct: 267 LPTDELGPGKRIYVWFEAVIGYLSASKEWAATIAGAPEAWRDWWENPDAAAYYF------ 320 Query: 262 VIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 +GKD + FH + WPA LL L LP V ++ ++ G K SKS G E +E + Sbjct: 321 -VGKDNIPFHTVIWPAMLLGYGGLDLPTDVPANQYVTFGGAKASKSAGIGRSVPEYLEVL 379 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM---I 377 DALRY L + D + +RVN +L GNLV+R ++ I K +DG+ + Sbjct: 380 QPDALRYALATVLPEQNDTEISDGDIIRRVNDELIANWGNLVNRVMAQINKFFDGVLPDV 439 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P+P S +L+ L E ++ + AL + EV++Y ++PW+ Sbjct: 440 PSPEELGGSHAELLAKVDEGLARTAELLEKVELRAALRAAMEASGEVNQYLYREEPWKTV 499 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 K + D A+ L +++ I +A+ L F+P ++ D+L V Sbjct: 500 KVDRDAAARSLATSIQAIAGIAVALAPFLPFSTERLQDVLGV 541 >gi|262376740|ref|ZP_06069968.1| methionyl-tRNA synthetase [Acinetobacter lwoffii SH145] gi|262308450|gb|EEY89585.1| methionyl-tRNA synthetase [Acinetobacter lwoffii SH145] Length = 686 Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 153/547 (27%), Positives = 247/547 (45%), Gaps = 71/547 (12%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I AD+ R R G DV + D HG I A+ Sbjct: 3 KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62 Query: 66 GVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI----LWKKISDKGDIY 120 G++ + + + RD D + +D + T H DT R ++ K D G+I Sbjct: 63 GISPEAQIANVQKEHIRDF-DGFGVHFDHYDST----HSDTNRARASEIYVKNRDAGNIA 117 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME- 161 + + ++ + D KG A+ QY YNA NP + Sbjct: 118 VRPVTQLFD-PEKGMFLSDRFIKGTCPKCKAEDQYGDSCEVCGATYNATELLNPHSTLSG 176 Query: 162 -------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + YFF+L + + L + + E LP+ N++ + ++GL D +SR Sbjct: 177 ATPVEKSSDHYFFKLPNFGEYLQKW--TRDEGRLPVSIANKLDEWFENGLNDWDISRDAP 234 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLD--NPDGSKAKFWPAD-----LHVIGKD 266 +G +IPD P YVW+DA Y+++ Y+ P+ + +W D H IGKD Sbjct: 235 YFGFEIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPELNFDDYWKKDSENEVYHFIGKD 294 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L AN P +F +GF+ G+K+SKS G I +E + + LR Sbjct: 295 IVYFHALFWPAMLEGANYRTPSGLFVNGFLTVNGQKMSKSRGTFIKAETYLEHLNPEYLR 354 Query: 327 YFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ +++ +D + D ++VN+DL + N+ SR I +D + T A E Sbjct: 355 YYFASKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINTKFDNKLSTICAEPE 414 Query: 386 SDESILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441 +S + S + Q E RE A+ ++++L + ++Y D +KPW L K + Sbjct: 415 LVQSFIDAGSSIAQAYEARE------FSAAIREIMALADKANQYIDEKKPWALAKQDGQE 468 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQS 488 + V V + + RQLA+ L +P LA ++ D L V E FQ Sbjct: 469 QQVHDVCSVGINLFRQLAVYLAPVLPTLAQQVQDFLQLESFDFASRETILVGHEIALFQP 528 Query: 489 LDQRLKP 495 L QR+ P Sbjct: 529 LMQRVDP 535 >gi|260598586|ref|YP_003211157.1| methionyl-tRNA synthetase [Cronobacter turicensis z3032] gi|260217763|emb|CBA32193.1| Methionyl-tRNA synthetase [Cronobacter turicensis z3032] Length = 712 Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 130/505 (25%), Positives = 230/505 (45%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 41 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 100 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + +++ ++ + G I Sbjct: 101 LGITPEQMIAEMSKEHQTDFAGFNISYDNYHSTHSDENRVLSELIYTRLKENGFIKNRTI 160 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 161 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 219 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 220 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 276 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 277 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTQSFEEYWKKDSATELYHFIGKDIVYF 336 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L + P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 337 HSLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYA 396 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG + A +D + Sbjct: 397 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGEL----AAELADPA 452 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 453 LYKTFTDAAAVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 512 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P+L + Sbjct: 513 CSMGINLFRVLMTYLKPVLPELCAR 537 >gi|193083786|gb|ACF09469.1| methionyl-tRNA synthetase [uncultured marine crenarchaeote KM3-47-D6] Length = 551 Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 138/502 (27%), Positives = 244/502 (48%), Gaps = 41/502 (8%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K I++A+ Y N + HIGH A + ADV RF + G++ + +D+ G I ++ Sbjct: 4 KAIITSALPYANGEIHIGHVASTYLPADVTTRFLKQKGVEAYYICASDDFGTPILIQSEK 63 Query: 65 AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + +V N R+F D + +I +D F +T+ + + ++KK+ G IY+ Sbjct: 64 EGKTPEEYVQYWNKRDFEDF-EAFNIKFDFFYKTSSSENRQFVQDVFKKLEQAGHIYENE 122 Query: 124 YSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEE---------------- 162 Y D+ + D V Y AD QY + + EE Sbjct: 123 IVQLYCNTDKKFLPDRYVIGTCPYCKADDQYSDLCEKCGRVPEEIENPHCSICGQAPVKK 182 Query: 163 --EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + YFF+L + DK+ Y E + L + + V +++K GL D ++R WGI I Sbjct: 183 KTKHYFFKLKNFSDKISQYLEDNKN--LQKDVKKYVQNWIKEGLIDWDITR-DISWGIPI 239 Query: 221 PDDP--QYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFW-PADL-HVIGKDILRFHAIYW 275 P + + Y W D Y+++T +L++ + KFW +D+ H IGKDI+ H ++ Sbjct: 240 PTGGANEKVFYGWFDNHLAYISSTIKFLNDNNKDGKKFWNESDIYHFIGKDIVYHHYLFL 299 Query: 276 PAFLLS--ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 PA L LP + + G + + +KISKS I + +E D LR++L+ Sbjct: 300 PAMRLGIEEEYKLPDYIPTRGHLTLQSKKISKSRNWYIGLKDFLEIFPADYLRFYLISIN 359 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 +D +D D ++N++L +GNLV+R++ +K ++G +P P F + D+ Sbjct: 360 PYSQDDLNFDWDEFATKINSELIGNLGNLVNRALGFTIKSFNGAVPGPDEFDDMDKEAKK 419 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + + ++ + M+ + RAL +++ + ++YF ++PW K P S V +++V Sbjct: 420 MINELVSHLGVLMEENHLDRALKKILQFSAHFNQYFQHKEPW---KNGPGTNSCV-FLSV 475 Query: 453 EVIRQLAILLQAFVPKLANKIF 474 +R LAI + F+PK + KI+ Sbjct: 476 NAVRSLAIAIYPFLPKSSQKIW 497 >gi|322832460|ref|YP_004212487.1| methionyl-tRNA synthetase [Rahnella sp. Y9602] gi|321167661|gb|ADW73360.1| methionyl-tRNA synthetase [Rahnella sp. Y9602] Length = 676 Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 131/504 (25%), Positives = 230/504 (45%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNEVHFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + S+ + ISYD++ T + + +++ ++ + G I Sbjct: 66 LGIRPEEMIAEMSQEHQKDFAGFGISYDNYHSTHSDENRELSALIYGRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + ++ Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E YFF L + L ++ S L + N++ + + GL+ +SR +G Sbjct: 185 LRDSEHYFFDLPEFSAMLQAWTRSGA---LQEQVANKMQEWFEHGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILRFH 271 +IPD P YVW+DA Y+ + L + D + +FW D H IGKDI+ FH Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDRRSDLNFDEFWKKDSTTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P +F HG++ G K+SKS G I + + D LRY+ Sbjct: 302 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTYLNHLDADCLRYYYTA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K +DG + A T +DE++ Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGKL----ADTLADETL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 + + I + ++ RA+ ++++L +RY D Q PW + K A + Sbjct: 418 YKTFTDAAESIAQAYDSRESGRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L+ + Sbjct: 478 SMGINLFRVLMTYLKPVLPSLSER 501 >gi|325105850|ref|YP_004275504.1| methionyl-tRNA synthetase [Pedobacter saltans DSM 12145] gi|324974698|gb|ADY53682.1| methionyl-tRNA synthetase [Pedobacter saltans DSM 12145] Length = 685 Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 150/544 (27%), Positives = 252/544 (46%), Gaps = 46/544 (8%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I+ A+ Y N HIGH A I AD+ R+ RL DV+F G+DEHG IA A Sbjct: 11 ITAALPYANGPKHIGHLAGAYIPADLYVRYLRLKERDVVFVCGSDEHGTAIANQAMKENT 70 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + +D+ + L IS+D + RT+E HH+T + ++ + +K DI+K S Sbjct: 71 TPRAIIDKYHTLIEECFSKLGISFDIYHRTSEPIHHETAQDFFRVLDNK-DIFKVESSEQ 129 Query: 128 YSLRDEAYYNDDEVYKG-----ADGQYYNAQH-------------NPVQWMEEEGYFFRL 169 Y + + D KG D Y Q NP+ + ++ Sbjct: 130 YYDEEAHAFLADRYIKGTCPNCGDHNAYGDQCEKCGTSLSPDELINPISTLTGNKPVKKM 189 Query: 170 SAYQDKLLSYYESH-PEFILPIERRN-------EVISFVKSGLKDLSLSRKTFDWGIKIP 221 + + L+ YE E+IL + + + S++ GL +++R DWGIK+P Sbjct: 190 TKHWYLPLNEYEGFLKEWILEGHKSDWKTNVYGQCKSWIDGGLHPRAVTRD-LDWGIKVP 248 Query: 222 --DDPQYIMYVWIDALTNYLTTTGY--LDNPDGSKAKFWPAD----LHVIGKDILRFHAI 273 D ++YVW DA Y++ T +DN + +W +H IGKD + FH I Sbjct: 249 AQDAEGKVLYVWFDAPIGYISATKQWAIDNNKDWEV-YWKDKETKLVHFIGKDNIVFHCI 307 Query: 274 YWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--VGVDALRYFLV 330 +P L + LP V ++ F+ +G+K+S S G I+ E +E+ +D LRY+L Sbjct: 308 VFPVMLKTHGEFILPDNVPANEFMNLEGDKMSTSRGWSIEMHEYLEDFPTRIDELRYYLA 367 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 D + + RVN +L +GN V+R + ++ K + G I + G D +I Sbjct: 368 SIAPETSDSEFTWKDYQARVNNELVAILGNFVNRVMILMQKYFAGKIESDGKMELKDAAI 427 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + + E+ ++ + +ALA + + ++Y ++PW+ K P+ A VL+ Sbjct: 428 SADIKSLYSEVEQSFEAYKFRQALASAMDIARLGNKYLTEKEPWKSYKEGPEEAREVLHN 487 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENR-----CFQSLDQRLKPGFMLHKTFDP 505 + +I AI LQ F+P A K+F++L + DE + F++ Q + + K D Sbjct: 488 CLHIIAHAAICLQPFLPNTAKKMFNMLNLKDEYKFGEEVVFEAGHQLNQATLLFEKVEDD 547 Query: 506 IFPR 509 + + Sbjct: 548 VIAK 551 >gi|257068912|ref|YP_003155167.1| methionyl-tRNA synthetase [Brachybacterium faecium DSM 4810] gi|256559730|gb|ACU85577.1| methionyl-tRNA synthetase [Brachybacterium faecium DSM 4810] Length = 599 Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 151/520 (29%), Positives = 237/520 (45%), Gaps = 59/520 (11%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + +A+A+P N HIGH + +DV +R+ R+ G DVL +GTDEHG I A Sbjct: 4 VLSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVEADKE 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G++ + D+N+R + L +SYD F RTT + HH + ++ + D G + + S Sbjct: 64 GISARDLADRNNRLIVEDLVALGLSYDLFTRTTTRNHHQVVQDMFVTVRDNGYMIEQTTS 123 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN---------PV--------QWM 160 G S D + GA G + N PV +++ Sbjct: 124 GAISPSTGRTLPDRYIEGTCPICSAGGARGDQCDNCGNQLDPTDLIDPVSRINGETPEFV 183 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218 E +F L A +L + + L R VI F ++ L+D+ T DWGI Sbjct: 184 ETSHWFLDLPALAAELGRWLDEREATGL---WRPNVIRFSQNILEDIKPRAMTRDIDWGI 240 Query: 219 KIP---DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW--PADL--HVIGKDIL 268 +P D P +YVW DA+ YL+ + G ++W P L + +GKD + Sbjct: 241 PVPGWEDQPNKRLYVWFDAVIGYLSASIEWARRSGDPEAWRRWWNDPETLAYYFMGKDNI 300 Query: 269 RFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 FH+ WPA +++ N L LP +V S F+ +G+K S S G VI Sbjct: 301 VFHSQIWPAEMIAQNGQGDKGGEPGRFGELKLPTEVVSSEFLTMEGKKFSSSKGIVIYVR 360 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374 +V+E DALRYF+ +D + R N +L G GNLV+R+ +MI K+ Sbjct: 361 DVLERYQPDALRYFISAAGPENQDADFTWVDFVSRTNNELVAGWGNLVNRTAAMIAKNV- 419 Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 G IP G F E D ++L + ++ A+A+ + LV E + Y +P+ Sbjct: 420 GEIPEAGEFEEIDTALLDQIREGFTTVGGLIEAHRQRAAIAEAMRLVGEANAYVSRTEPF 479 Query: 435 ELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++K + R TVL+V + + L +L F+P+ AN + Sbjct: 480 KMKAEEQRPRLLTVLHVLAQAVTDLNTMLAPFLPQSANAV 519 >gi|89097430|ref|ZP_01170319.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus sp. NRRL B-14911] gi|89087726|gb|EAR66838.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus sp. NRRL B-14911] Length = 547 Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 142/540 (26%), Positives = 254/540 (47%), Gaps = 49/540 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R+ G +VL+ +G+D +G IA A++ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRMKGEEVLYVSGSDCNGTPIAIRAKHEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + K D+ R+F + L +YD + RT HH T + ++ + + G + Sbjct: 63 KSAKEIADRYHRDFAASFEQLGFTYDLYTRTDAPHHHQTVQEVFLSLLENGHLVPRTIEQ 122 Query: 127 WYSLRDEAYYNDDEVYKG--------ADGQYYNAQH-----------------NPVQWME 161 Y R + D +G A G +A P + E Sbjct: 123 TYC-RTCVQFLPDRYVEGVCPSCGSQARGDQCDACSAILEPADLLDKSCKICGTPPEMKE 181 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKI 220 + Y+FRLS +Q +L E L + + + ++ GL D + +R D G+ + Sbjct: 182 TDHYYFRLSHFQKQLEELSEEARSRHLWRDNSSSLTRRYLTEGLLDRAATRD-LDVGVPV 240 Query: 221 PDD--PQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADL---HVIGKDILRFHAIY 274 P + + +YVWI+A+ YL+ + G ++FW +D+ +V GKD + FH I Sbjct: 241 PIEGMEKKKIYVWIEAVIGYLSASREWARQHGKDGSRFWGSDVISYYVHGKDNIPFHTII 300 Query: 275 WPAFLLSANLP-LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 WPA + LP P ++ S ++ + +K+S S + +++E D++RYFL Sbjct: 301 WPAIQMGIGLPGEPARMVSGEYLTLEKKKLSTSRNYAVWVPDILERYEPDSIRYFLAVNA 360 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 +D + N++L GNLV+R+ I K YD MIP G +E+ + + Sbjct: 361 PENRDADFSWREFVYSHNSELLGAYGNLVNRTFKFIEKYYDSMIPD-GKLSEAVQEDIK- 418 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 + ++ E ++ + AL + + V ++YFD+++PW+ K++P + + L V Sbjct: 419 --HLYEKTGEKIEGAKLKEALEDIFAFVRSANKYFDSEQPWKTIKSDPQKCADALQTCVY 476 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 +I+ LA LL F+P + KI ++L V E + ++ ++RL T P+F R Sbjct: 477 IIKNLARLLNPFLPFSSRKINNMLQVNAHTLEWKEVRAAEKRL-------GTIAPLFSRL 529 >gi|330957740|gb|EGH58000.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 682 Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 143/547 (26%), Positives = 240/547 (43%), Gaps = 51/547 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +D + + D A L + +D+F T + + +++K++ D G I Sbjct: 61 RAEKEGITPEQLIDNVKAEHSADFAGFL-VDFDNFHSTHSDENRELSSMIYKRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164 + ++ + D KG A+ QY A + P + + Sbjct: 120 ATRSVTQYFDPEKNMFLAD-RFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAIS 178 Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 +FF L A+ L S+ S L N++ ++ SGL+ +SR Sbjct: 179 GATPVLKDSKHFFFDLPAFDTMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266 +G +IPD+P YVW+DA Y+ + L PD +W D H IGKD Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A L P + HG++ G+K+SKS G I ++ + + LR Sbjct: 296 IVNFHALFWPAMLEGAGLRKPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ G D + + ++VN+DL + N+ SR I K GM+ A E Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGMMVEANAAPE 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDE 471 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFML 499 V + + + RQL I L+ +P LA L VA D+++ ++ +L P L Sbjct: 472 VQAVCALGINLFRQLVIFLKPVLPNLAADAEKFLNVAPLTWDDHKTLL-VNHQLNPFSAL 530 Query: 500 HKTFDPI 506 DP+ Sbjct: 531 MTRIDPL 537 >gi|293390593|ref|ZP_06634927.1| methionyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951127|gb|EFE01246.1| methionyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 686 Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 134/512 (26%), Positives = 241/512 (47%), Gaps = 58/512 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I A Sbjct: 5 KRKILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLKAD 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+T + +D + + MAD +IS+D++ T + + + +++ ++ + G I Sbjct: 65 QMGITPEQLIDDVRQ--KHMADFAGFNISFDNYHSTHSEENRELSELIYSRLKENGFIKS 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM--------- 160 S Y ++ + D KG + + A +NP + + Sbjct: 123 RTISQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCAATYNPTELINPRSVVSGA 181 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 + E +FF L +++ L ++ S L E N++ + ++GL+ +SR Sbjct: 182 TPVMKDSEHFFFDLPSFEAMLKNWLGSGS---LQSEVVNKMQEWFEAGLQQWDISRDAPY 238 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTT-------TGYLDNPDGSKAKFWPAD-----LHVI 263 +G +IP+ YVW+DA Y+ + Y+D DG FW D H I Sbjct: 239 FGFQIPNAEGKYFYVWLDAPIGYMASFKNLCKRESYIDF-DG----FWHKDSDAELYHFI 293 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323 GKDI+ FH+++WPA L A+ P +F HG++ GEK+SKS G I ++ + + Sbjct: 294 GKDIMYFHSLFWPAMLEGADFRKPSNIFVHGYVTVNGEKMSKSRGTFIQAATYLKHLDPE 353 Query: 324 ALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ +++ D + + +RVN DL N + NL SR+V I K +DG + A Sbjct: 354 CLRYYYAAKLSNRIDDLDLNLEDFVQRVNTDLVNKLVNLASRNVGFIQKRFDGKL----A 409 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 + D+++ ++I +N+ +A+ ++++L + ++Y D + PW + K Sbjct: 410 ASLDDKALFDEFIAQSEQIAAYYENREFGKAIREIMALTDKANKYIDDKAPWVIAKEAGK 469 Query: 443 RA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 A V + +++ R L L+ +PKLA + Sbjct: 470 DAELQAVCSMGIQLFRVLMGYLKPVLPKLAER 501 >gi|304414294|ref|ZP_07395662.1| Methionyl-tRNA synthetase [Candidatus Regiella insecticola LSR1] gi|304283508|gb|EFL91904.1| Methionyl-tRNA synthetase [Candidatus Regiella insecticola LSR1] Length = 557 Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 135/507 (26%), Positives = 232/507 (45%), Gaps = 44/507 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K +K+ ++ A+ Y N H+GH E I AD+ R+ R+ G +V F D HG I Sbjct: 3 KMAKKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNEVYFICADDAHGTPIMLK 62 Query: 62 AQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ G+ ++ + N + +D A ISYD++ + + + + ++++ ++ +KG I Sbjct: 63 AQQLGLKPEQMIAEMNQEHQQDFAG-FSISYDNYHSSHSEENLELSKLIYCRLKEKGYIK 121 Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM--------- 160 K S Y E + +D V G + + A ++P++ M Sbjct: 122 KRIISQLYDPEKEMFLSDRFVKGSCPKCQSPDQYGDNCEACGATYSPIELMDPKSTLSGA 181 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 E E +FF L A+ D L S+ S L + N++ + SGL+ ++R Sbjct: 182 VPLIRESEHFFFDLPAFSDMLQSWIHSG---TLQEQVANKMQEWFTSGLQQWDITRDAPY 238 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFW----PADL-HVIGKDIL 268 +G +IPD P YVW+DA Y++ L D FW DL H GKDI+ Sbjct: 239 FGFEIPDAPGKYFYVWLDAPIGYMSAFKNLCSKRSDLDFNAFWCEGATTDLYHFTGKDIV 298 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH+++WPA L + P +F HG++ G K+SKS G I + D LRY+ Sbjct: 299 YFHSLFWPAMLDGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTYLNYFDPDCLRYY 358 Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 +++ D + +RVN D+ N + NL +R+ S I K + G + A +D Sbjct: 359 YAAKLSSRIDDIDLNLADFVQRVNTDVVNKLVNLAARNASFINKKFAGKL----AHQLAD 414 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445 ++ + I + N+ +A+ ++++L +RY D Q PW + K + Sbjct: 415 AALYKTFTDAAVTIAQAYDNRESGKAIREIMALADLANRYVDEQAPWVVAKDASRTTDLQ 474 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472 + + + + R L I L+ +P L+ + Sbjct: 475 MICSMGINLFRVLMIYLKPVMPSLSTR 501 >gi|326772382|ref|ZP_08231667.1| methionine--tRNA ligase [Actinomyces viscosus C505] gi|326638515|gb|EGE39416.1| methionine--tRNA ligase [Actinomyces viscosus C505] Length = 615 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 151/528 (28%), Positives = 238/528 (45%), Gaps = 63/528 (11%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +I +A+A+P N HIGH + +DV +R+ R+ G DVL +GTDEHG I AA Sbjct: 3 HILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + D+N+R + L +SYD F RTT H+ + ++ + D G + + Sbjct: 63 EGLSARELADRNNRLIVEDLVALGLSYDLFTRTTAGNHYHVVQDMFTTVRDNGYMVQQVT 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159 S D + +GA G + N + ++ Sbjct: 123 RSAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDTCGNQLDPTDLISPRSRINGETPEF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 +E +F L A L ++ + E R VI F ++ L D+ T DWG Sbjct: 183 VETTHWFLDLPALAQALGAWLD---EREASGTWRPNVIKFSQNLLGDIRPRAMTRDIDWG 239 Query: 218 IKIP---DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HVIGKD 266 I +P D P +YVW DA+ YL+ + +P+ +A +W P L + +GKD Sbjct: 240 IPVPGWEDQPTKRLYVWFDAVIGYLSASVEWARRSGDPEAWRA-WWNDPQALSYYFMGKD 298 Query: 267 ILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312 + FH+ WPA LL N L LP +V S F+ +G+K S S G VI Sbjct: 299 NIVFHSQIWPAELLGYNGQGAAGGEPGRLGVLNLPTEVVSSEFLTMEGKKFSSSHGIVIY 358 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 + +E DALRYF+ D + +R N +L G GNLV+R+ SMI K Sbjct: 359 VRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGELVAGWGNLVNRTASMIHKR 418 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 + G IP P + D ++L + + + AL + + LV E ++Y + Sbjct: 419 F-GQIPEPAELQDIDRTLLDAVEAGFASVGDLIAQHRQKAALGEAMRLVGEANKYVADTQ 477 Query: 433 PWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P++LK +P R +TVL+ + + L ++L F+P AN + +L Sbjct: 478 PFKLKGEDPATQARLATVLHTLAQAVTDLNLMLSPFLPHAANDVDRVL 525 >gi|291303161|ref|YP_003514439.1| methionyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] gi|290572381|gb|ADD45346.1| methionyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] Length = 597 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 145/526 (27%), Positives = 239/526 (45%), Gaps = 64/526 (12%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ A+A+P N HIGH + AD+ AR+ R+ G DVL +GTDEHG I A Sbjct: 3 HVLAALAWPYANGPRHIGHVAGFGVPADIFARYMRMAGHDVLMVSGTDEHGTPILVQADQ 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G ++ +R + + L +SYD F RTT H+ + +++ + G I + Sbjct: 63 EGAKPAELANRYNRVIVEDLNALGMSYDLFTRTTTANHYQVVQEMFRTVHANGYIVEKTT 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNA--QHNPV--------------QW 159 G S D + Y A G Q N Q +P+ ++ Sbjct: 123 KGAISPSTGRTLPDRYIEGTCPICGYDNARGDQCDNCGNQLDPIDLINPKSRINGEVPKF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 +E + +F L A D L + ++ ++ R V+ F + + D+ T DWG Sbjct: 183 IETQHFFLDLPALADALGEWLKTRSDW------RPNVLKFAMNLVDDMRPRAITRDLDWG 236 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW--PADL--HVIGK 265 + +P D+P +YVW DA+ Y + + G K+W P L + +GK Sbjct: 237 VPVPLEGWQDNPTKRLYVWFDAVIGYFSASVEWARRSGDPEAWRKWWNDPEALSYYFMGK 296 Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FHA WPA LL+ N L LP +V S ++ +G+K S S VI Sbjct: 297 DNITFHAQIWPAELLAHNGKGSKGGEPGVYGELNLPTEVVSSEYLTMEGKKFSSSRKVVI 356 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 + +E G DALRYF+ D + +R N +L G GNLV+RS++M K Sbjct: 357 YVRDFLERYGPDALRYFIAAAGPENNDTDFTWAEFVRRNNDELVAGWGNLVNRSIAMAAK 416 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 ++ G IP G + D +L+ + + ++ + + + + + V+ V++Y Sbjct: 417 NF-GQIPEAGELEDIDRELLATVTAAFDTVGGHLASNKVKAGIGEAMRTVAAVNKYLADT 475 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 PW+LK+ P R +TVL+V ++ + LL F+P + K+ ++L Sbjct: 476 APWKLKEDKP-RMATVLHVALQAVNDCKTLLAPFLPFSSQKVNELL 520 >gi|307130139|ref|YP_003882155.1| methionyl-tRNA synthetase [Dickeya dadantii 3937] gi|306527668|gb|ADM97598.1| methionyl-tRNA synthetase [Dickeya dadantii 3937] Length = 677 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 133/503 (26%), Positives = 231/503 (45%), Gaps = 44/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ R+ R+ G V F D HG I AQ Sbjct: 7 KILVTCALPYANGPIHLGHMLEHIQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV + + S+ + +ISYD++ T + + + ++++++ + G I S Sbjct: 67 GVAPEQMIATVSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYRRLKENGFIKNRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------------ 161 + +++ + D KG A QY A ++P + +E Sbjct: 127 QLFD-PEKSMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSAVSGATPVM 185 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E +FF L A+ D L S+ S L + N++ + +GL+ ++R +G + Sbjct: 186 RESEHFFFDLPAFSDMLQSWTRSG---ALQEQVANKMQEWFDAGLQQWDITRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272 +PD P YVW+DA Y+ + L + G S +FW D H IGKDI+ FH+ Sbjct: 243 VPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLSFDEFWRKDSSTELYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P +F HG++ G K+SKS G I ++ + D LRY+ + Sbjct: 303 LFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKADTYLKHLDADCLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 ++ D + + +RVNAD+ N + NL SR+ I K +DG + A +D ++ Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGQL----AGQLADPALY 418 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 Q I + ++ +A+ ++++L +RY D Q PW + K A + Sbjct: 419 QTFIDAAQTIADAYGSRESGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICS 478 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 479 MGINLFRVLMTYLKPVLPSLTER 501 >gi|270346536|pdb|3H97|A Chain A, Structure Of A Mutant Methionyl-Trna Synthetase With Modified Specificity gi|270346537|pdb|3H99|A Chain A, Structure Of A Mutant Methionyl-Trna Synthetase With Modified Specificity Complexed With Methionine gi|270346538|pdb|3H9B|A Chain A, Structure Of A Mutant Methionyl-Trna Synthetase With Modified Specificity Complexed With Azidonorleucine Length = 560 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 130/505 (25%), Positives = 230/505 (45%), Gaps = 45/505 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 18 KKILVTCASPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 77 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 78 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 137 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 138 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 196 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 197 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 253 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA + + L + G F W D H IGKDI+ F Sbjct: 254 EIPNAPGKYFYVWLDAPIGLMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 313 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 +++WPA L +N P +F HG++ G K+SKS G I + D+LRY+ Sbjct: 314 LSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 373 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG++ + A D Sbjct: 374 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 429 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + I E +++ +A+ ++++L +RY D Q PW + K A + Sbjct: 430 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 489 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKL + Sbjct: 490 CSMGINLFRVLMTYLKPVLPKLTER 514 >gi|172040240|ref|YP_001799954.1| methionyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109] gi|229470714|sp|B1VFI1|SYM_CORU7 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|171851544|emb|CAQ04520.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 611 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 147/531 (27%), Positives = 246/531 (46%), Gaps = 67/531 (12%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +++ S A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG + A Sbjct: 3 KRVLTSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMIGNDVLMVSGTDEHGTPLLVQAD 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 T + D+ +R + L +SYD F RTT + H+ + L++ +++ G + K Sbjct: 63 KENTTVRELADRYNRIIVEDLVGLGLSYDLFTRTTTRNHYAIVQELFRGLNENGYMLKQT 122 Query: 124 YSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------Q 158 G S D + +G Q +P + Sbjct: 123 TRGAVSPSTGRTLPDRYIEGTCPLCGATDARGDQCDNCGNQLDPADLIDPRSKINGETPE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFD 215 +++ E + L A + L + + ++ R V+ F + LKD+ ++SR D Sbjct: 183 FVDTEHFMLDLPALAEALEEWLKGRNDW------RPNVLKFSLNLLKDIRPRAMSRD-ID 235 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262 WG+ +P D+ +YVW DA+ YL+ + +P+ + K+W + Sbjct: 236 WGVPVPIEGWQDNNAKKLYVWFDAVVGYLSASIEWAWRTGDPEAWR-KWWNDPEAVSYYF 294 Query: 263 IGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLG 308 +GKD + FH+ WP +L L LP +V S F+ G K S S G Sbjct: 295 MGKDNITFHSQIWPGEMLGYAGKGSKGGEQGELGELNLPTEVVSSEFLTMSGSKFSSSKG 354 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 VI + ++E G DALRYF+ D + D +R+N++LAN GNLV+R+ SM Sbjct: 355 VVIYVRDFLKEFGPDALRYFIAVAGPENTDTDFTWDEFVRRINSELANEWGNLVNRTASM 414 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428 K++ G IP PG FT D+++L + + + +Q + + + + + ++Y Sbjct: 415 AHKNF-GEIPQPGEFTAEDQALLDEAKQAYTVVGDALQLSKFKAGMTEAMRIAARANQYI 473 Query: 429 DAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 AQ+PW+L K T +R +TVLYV ++V+ + L+ ++P A K+F+ L Sbjct: 474 AAQEPWKLAKDETQRERLATVLYVALQVVSDVNTLMTPYLPFSAQKVFETL 524 >gi|118576573|ref|YP_876316.1| methionyl-tRNA synthetase [Cenarchaeum symbiosum A] gi|118195094|gb|ABK78012.1| methionyl-tRNA synthetase [Cenarchaeum symbiosum A] Length = 548 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 145/538 (26%), Positives = 255/538 (47%), Gaps = 46/538 (8%) Query: 4 REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R++ I++A+ Y N + H+GH A + ADV RF RL G++ + +D++G I + Sbjct: 2 RDRAIITSALPYANGEIHLGHIASTYLPADVTTRFLRLKGVEAYYICASDDYGTPILIQS 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + G T + +V+ +R R+ + L IS+D F RT+ + + + ++ +++ G IY+ Sbjct: 62 EKEGKTPEEYVEHWNRRDREDFEALGISFDFFSRTSSPANTEFVQHVFTVLNEGGHIYED 121 Query: 123 CYSGWYSLRDEAYYNDDEV-----YKGADGQYYN-------------------AQHNPVQ 158 +Y D + D V + A QY + + PV+ Sbjct: 122 EVVQFYCENDSKFLPDRYVRGTCPHCKAAEQYSDLCESCGRVPEEIADPHCAICGNTPVK 181 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 YFFRL + +L + E + L + + V +++KSGL D ++R WG+ Sbjct: 182 -RSSRHYFFRLGGFSGRLSEWLEGNTN--LQEDVKKYVQNWIKSGLSDWDITRD-IPWGV 237 Query: 219 KIPDDPQY--IMYVWIDALTNYLTTTGYLDNPDGSKAK-FW-PADL-HVIGKDILRFHAI 273 IP D + Y W D Y++ G AK FW AD+ H IGKDI+ H + Sbjct: 238 PIPLDGAAGKVFYGWFDNHLAYISAASEFLGKRGIDAKEFWNSADIYHFIGKDIVYHHYL 297 Query: 274 YWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 + PA L + LP + + G + + +KISKS I E + E D LR++L Sbjct: 298 FLPAIRLGTGEYKLPDYIPTRGHLTLESKKISKSRNWYIGLREFLGEYPADYLRFYLAYI 357 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 +D +D R+N++L +GN V+R++ K +DGM+P P ++D+ Sbjct: 358 NPYAQDDLNFDWGDFAARINSELIGNVGNFVNRALGFAAKRFDGMVPEPDTVGKTDKEAE 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451 + + + +E+ I RAL +++ + ++YF +PW K P A+T +Y++ Sbjct: 418 ARITVLSEELGXXXXXXXIDRALKRILEFSAHFNQYFQHAEPW---KGGPG-AATCVYMS 473 Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFV---ADENRCFQSLDQRLKPGFMLHKTFDPI 506 +R +A+ L F+P+ A +I+ L + A E + ++PG H+ DP+ Sbjct: 474 ANAVRSMAVALCPFLPESAERIWGQLGLEGRASEEQWDSISAVAIRPG---HRLGDPV 528 >gi|161528471|ref|YP_001582297.1| methionyl-tRNA synthetase [Nitrosopumilus maritimus SCM1] gi|160339772|gb|ABX12859.1| methionyl-tRNA synthetase [Nitrosopumilus maritimus SCM1] Length = 551 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 145/507 (28%), Positives = 240/507 (47%), Gaps = 41/507 (8%) Query: 4 REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +K I++A+ Y N + H+GH A + ADV RF + +G++ + +D+ G I + Sbjct: 2 NKKAIITSALPYANGEIHLGHVASTYLPADVTTRFLKQNGVEAYYVCASDDFGTPILIQS 61 Query: 63 QNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + G T +V N R++ D + DI +D F +T+ + + ++KK++D G IY+ Sbjct: 62 EKEGKTPAEYVAHWNKRDYEDFS-AFDIDFDYFYKTSSDENIQFVQDVFKKLNDAGHIYE 120 Query: 122 GCYSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEE-------------- 162 +Y D+ + D V Y A+ QY + + + EE Sbjct: 121 QEIIQFYCNNDKKFLPDRYVKGTCPYCKAEDQYSDLCESCGRVPEEITNPKCSLCGQPPT 180 Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 YFF+L + + L + + + L + + V +++KSGL D ++R WG+ Sbjct: 181 KEKTTHYFFKLKNFGEPLSKWLDENDH--LQKDVKKYVQNWIKSGLIDWDITRD-ITWGV 237 Query: 219 KIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FW-PADL-HVIGKDILRFHAI 273 +P D + Y W D Y++T N G K FW AD+ H IGKDI+ H + Sbjct: 238 PVPLDDAKDKVFYGWFDNHLAYISTALKFLNDKGIDGKEFWNSADIYHFIGKDIVYHHYL 297 Query: 274 YWPAFLLS--ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 + PA L + LP + + G + + +KISKS I E +E D LR++LV Sbjct: 298 FLPAMRLGIESEYKLPDYIPTRGHLTLQAKKISKSRNWYIGLKEFLEYYPADYLRFYLVS 357 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D +D D R+N++L +GN ++R++ K +DG IP P F E D Sbjct: 358 INPYSQDDLNFDWDDFTTRINSELIGNLGNFINRALGFTKKAFDGNIPDPEDFDEKDSEA 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + E+ M+ + RAL +++ S ++YF ++PW K P AS V Y+ Sbjct: 418 EQKIKSLASEVGSLMEQNHLDRALKKIMEFSSYFNQYFQHKEPW---KKGPGTASCV-YL 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477 +V +R LAI F+PK A I+ L Sbjct: 474 SVNAVRSLAIATFPFIPKSAQNIWTQL 500 >gi|330859356|emb|CBX69702.1| methionyl-tRNA synthetase [Yersinia enterocolitica W22703] Length = 675 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 134/503 (26%), Positives = 226/503 (44%), Gaps = 42/503 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I AD+ RF R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + S+ + ISYD++ T + + +++ ++ G I Sbjct: 66 LGIEPEEMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYSRLKANGYIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 S Y + D V G + + A ++P + + Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSAVSGATPVM 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E +FF L A+ D L ++ S L + N++ + +SGL+ +SR +G + Sbjct: 186 RESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFW----PADL-HVIGKDILRFHA 272 IPD P YVW+DA Y+ L + G +FW ADL H IGKDI+ FH+ Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWRKDSEADLYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L +N P +F HG++ G K+SKS G I ++ + D LRY+ + Sbjct: 303 LFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKHLDADCLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 ++ D + + +RVNAD+ N + NL SR+ I K + G + A +D ++ Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGKL----ADHLADPALY 418 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + I + N+ +A+ ++++L +RY D Q PW + K A + Sbjct: 419 KTFTDAATSIADAYSNRESSKAIREIMALADIANRYVDEQAPWVVAKEEGRDADLQAICS 478 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 479 MGINLFRVLMTYLKPVLPALTER 501 >gi|123443000|ref|YP_001006975.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|187653900|sp|A1JTX6|SYM_YERE8 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|122089961|emb|CAL12818.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 675 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 134/504 (26%), Positives = 228/504 (45%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I AD+ RF R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + S+ + ISYD++ T + + +++ ++ G I Sbjct: 66 LGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYSRLKANGYIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160 S Y ++ + D KG + + A ++P + + Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A+ D L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFW----PADL-HVIGKDILRFH 271 +IPD P YVW+DA Y+ L + G +FW ADL H IGKDI+ FH Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWRKDSEADLYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L +N P +F HG++ G K+SKS G I ++ + D LRY+ Sbjct: 302 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKHLDADCLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K + G + A +D ++ Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGKL----ADHLADPAL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 + I + N+ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 YKTFTDAATSIADAYSNRESSKAIREIMALADIANRYVDEQAPWVVAKEEGRDADLQAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 478 SMGINLFRVLMTYLKPVLPALTER 501 >gi|289641468|ref|ZP_06473631.1| methionyl-tRNA synthetase [Frankia symbiont of Datisca glomerata] gi|289508678|gb|EFD29614.1| methionyl-tRNA synthetase [Frankia symbiont of Datisca glomerata] Length = 575 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 144/521 (27%), Positives = 241/521 (46%), Gaps = 49/521 (9%) Query: 2 KEREK-LYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 +ER + + ++ A Y N PH+GH A + AD+ AR+ RL G VL +G+D HG I Sbjct: 31 RERGRPVLVAVAWPYANGMPHLGHIAGAYLPADIFARYQRLAGNQVLMVSGSDTHGTPIT 90 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A GV+ V++ F + D + IS+D F T H + + ++ ++ + G I Sbjct: 91 VRADIDGVSPAEIVNRYHPEFLRIWDDIGISFDLFTSTMTDNHREVAQDVFVRLREAGYI 150 Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWMEEEG---- 164 ++ + + D V Y A G Q N +P ++ Sbjct: 151 VPEETVQFFDPQAGRFLPDRYVVGTCPFCAYGEARGDQCENCGRTLDPDILLDPRSKLTG 210 Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERR---NEVISFVKSGLKDLSLSR 211 +F RLSA D LL++ E+ + RR N + FVK GL D +++R Sbjct: 211 AVPEKRATTHFFLRLSALADDLLAWLETRTGW-----RRHVMNWSLQFVKDGLHDRAITR 265 Query: 212 KTFDWGIKIPDD---PQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADL 260 DWG+ +P D P +YVW +A+ YL+ + +PD + ++W A Sbjct: 266 D-LDWGVPLPTDELGPGKRIYVWFEAVIGYLSASKEWAARSGDPDAWR-QWWQNPDAASY 323 Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 + +GKD + FH + WPA L+ L LP V ++ ++ G K SKS G E ++ Sbjct: 324 YFVGKDNIPFHTVIWPAMLIGYGGLELPTDVPANQYVTFGGAKASKSAGIGRGVREYLDR 383 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 + DALRY L + D + +R+N +L GNLV+R ++ I K +DG +P Sbjct: 384 LQPDALRYALATVLPEQNDTEITDADIIRRINDELIANWGNLVNRVMAQIGKRFDGRVPE 443 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 G + ++ L + E + + AL + + +EV+ Y ++PW+ KT Sbjct: 444 AGELDGAHAKLIDSVDAGLVRVGELIGRVELRAALRAAMEISAEVNAYLYREEPWKTVKT 503 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +P RA L V+++ I + L F+P + ++ D L ++ Sbjct: 504 DPARAGRTLAVSIQAISGITTALAPFLPFTSARLADTLGIS 544 >gi|121603729|ref|YP_981058.1| methionyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2] gi|187647741|sp|A1VKF9|SYM_POLNA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|120592698|gb|ABM36137.1| methionyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2] Length = 707 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 150/535 (28%), Positives = 245/535 (45%), Gaps = 62/535 (11%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +R +L+++TA+ Y N HIGH E I AD+ R+ R+ G V F D HG I Sbjct: 1 MSQR-RLFVTTALPYANGNFHIGHIMEYIQADIWVRYQRMQGNAVNFVGADDAHGAPIMI 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD--KGD 118 AA+ AG T + FV + + D IS+D++ T +H+ R +++ + D +G Sbjct: 60 AAEKAGKTPQQFVADIASGRKPYLDGFHISFDNWSSTDSPENHELARQIYRDLRDNPQGS 119 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------ 160 + + + ++ + D KG A QY A + P + Sbjct: 120 LIETKTIEQFFDPEKNMFLPDRFIKGECPKCHAKDQYGDNCEVCGAVYAPTDLINPYSAL 179 Query: 161 --------EEEGYFFRLSAYQDKLLSYYES-------HPEFILPIER----RNEVISFVK 201 E +FF+LS + + + ES PE ++ R Sbjct: 180 SGVTPVLKSSEHFFFKLS--DARCVEFLESWTQDGKLQPEVANKVKEWFSVRENADGTQS 237 Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-- 259 GL D +SR +GI+IPD P YVW+DA YL + L + G + AD Sbjct: 238 EGLGDWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDRRGESYDDYMADPK 297 Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIE 315 H IGKDI+ FH ++WPA L + P +F HGF+ ++ GEK+SKS G +DP++ Sbjct: 298 LEQYHFIGKDIVTFHTLFWPAMLHFSGRKTPDNIFVHGFLTVNNGEKMSKSRGTGLDPLK 357 Query: 316 VIEEVGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 + +G++ LRY+L ++ A +D ++ D RVN+DL N+ SR+ + K Sbjct: 358 YL-SLGMNPEWLRYYLAAKLNARNEDIDFNADDFMARVNSDLVGKFINIASRAAGFLTKR 416 Query: 373 YDGMIP-TPGAFTESDES-----ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 +DG I G F D +S EI E + + + +A+ +++ + ++ Sbjct: 417 FDGKIGDASGDFPNPDGQGYPSLAISEIGACAAEISELYEQRELGKAMRKIMEIADGLNS 476 Query: 427 YFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +DA +PW+L K+ R + T+E R L + L+ +P LA ++ L Sbjct: 477 DWDAAQPWKLAKSEEPQQLARLQRICSNTIEGFRLLTLYLKPVLPALAIEVESFL 531 >gi|89889849|ref|ZP_01201360.1| methionine--tRNA ligase, metS [Flavobacteria bacterium BBFL7] gi|89518122|gb|EAS20778.1| methionine--tRNA ligase, metS [Flavobacteria bacterium BBFL7] Length = 690 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 139/515 (26%), Positives = 235/515 (45%), Gaps = 39/515 (7%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M +++ I+ A+ Y N HIGH A + AD+ AR+ R+ G DV F G+DEHG I Sbjct: 1 MSSQQRYTITAALPYTNGPVHIGHLAGVYVPADIFARYQRMRGSDVAFICGSDEHGVPIT 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + VD+ R D I++D + RT+ HH T + K+ + G Sbjct: 61 IKAKKEGITPQELVDRYHRIIGDSFKEFGITFDHYGRTSSTEHHKTASAFFTKLYNDGKF 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVY----KGADGQYYNAQ-------HNPV----------- 157 + Y + + D V K + + Y Q HN Sbjct: 121 IEQVTEQLYDPEADQFLADRFVVGTCPKCGNTESYGDQCEKCGTSHNATDLIDPKSAITG 180 Query: 158 ---QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + E + +F L Y D L + +V S++ GL +++R Sbjct: 181 NIPELKETKHWFLPLDEYSDWLNEWIVEGHSKDWKANVLGQVKSWITDGLHPRAVTRD-L 239 Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDI 267 DWGI +P + ++YVW DA Y++ T +G + +W D LH IGKD Sbjct: 240 DWGIPVPVEGADGKVLYVWFDAPIGYISATKEWAAREGKNWEDYWKKDDTKLLHFIGKDN 299 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324 + FH I +PA L + + +P V ++ F+ + +KIS S + E +E+ D Sbjct: 300 IVFHCIIFPAMLKAHGDYVMPDNVPANEFLNLEDDKISTSRNWAVWLHEYLEDFPGQQDV 359 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N +L +GN V+R + + K Y+G++P Sbjct: 360 LRYVLTANAPETKDNNFTWKDFQARNNNELVANLGNFVNRVIVLTNKYYEGIVPETANLA 419 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF--DAQKPWELKKTNPD 442 + D +L + I +++ AL ++++L S ++Y + +PW+L KTNP+ Sbjct: 420 QRDLDVLEQIKAFPKTIGDSLDRYRFREALQELMNLSSIGNKYIAEEGLEPWKLAKTNPE 479 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + ++YV +++ LAIL + F+P ++K+ +L Sbjct: 480 QVQNIMYVCLQLTTALAILSEPFLPHTSSKLKSML 514 >gi|254492552|ref|ZP_05105724.1| methionyl-tRNA synthetase [Methylophaga thiooxidans DMS010] gi|224462444|gb|EEF78721.1| methionyl-tRNA synthetase [Methylophaga thiooxydans DMS010] Length = 678 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 140/512 (27%), Positives = 235/512 (45%), Gaps = 59/512 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ RF R+ G + + D HG I AQ Sbjct: 2 QRKILVTSALPYANGSIHLGHMVEYIQTDIWVRFQRMRGHECHYVCADDAHGTPIMLRAQ 61 Query: 64 NAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI----SDKGD 118 G+T + + D ++ + D A+ IS+D++ T H D R L +I D G Sbjct: 62 KEGITPEQLISDVSTEHQADFAE-FAISFDNYHST----HSDENRALASQIYLANRDAGH 116 Query: 119 IYKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM------- 160 I S Y E + D E K GA QY A ++P + Sbjct: 117 IETRTISQAYDPEKEMFLPDRFIRGECPKCGAADQYGDNCEACGATYDPTELKNPVSAVS 176 Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 E E YFF+L ++ L + +H + + P E ++ + +SGL+D +SR Sbjct: 177 GATPITKESEHYFFKLGDFEKTLQEW--THSDHLQP-EVTRKLSEWFESGLQDWDISRDA 233 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPD---------GSKAKFWPADLHVI 263 +G +IPD YVW+DA YL + Y D GS + +H I Sbjct: 234 PYFGFQIPDTDNKFFYVWMDAPIGYLASFKNYCDRSGIDFDSFMKPGSDTEM----VHFI 289 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323 GKDI+ FHA++WPA L A P V++HGF+ G+K+SKS G I ++ + + Sbjct: 290 GKDIIYFHALFWPAMLEGAGFRQPDNVYAHGFLTVDGKKMSKSRGTFIKARTYLDHLNPE 349 Query: 324 ALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ ++ G D + + R+N+DL + N+ SR + K +DG + + Sbjct: 350 YLRYYFAAKLGSGIDDIDLSLEDFQTRINSDLVGKVVNIASRCAGFLTKRFDGKLGS--- 406 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 S+ S+ + + + I + +++ +A+ ++++L ++Y D KPW L K + Sbjct: 407 -ELSEPSLFNDFIKQAENIAKRYEDREFGQAMREIMALADRANQYIDEMKPWVLAKEDGK 465 Query: 443 RA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 A + + + + R L L+ +PK A + Sbjct: 466 EAEVQAICTMGINLFRVLIAYLKPVLPKTAEQ 497 >gi|251790453|ref|YP_003005174.1| methionyl-tRNA synthetase [Dickeya zeae Ech1591] gi|247539074|gb|ACT07695.1| methionyl-tRNA synthetase [Dickeya zeae Ech1591] Length = 677 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 133/503 (26%), Positives = 229/503 (45%), Gaps = 44/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ R+ R+ G V F D HG I AQ Sbjct: 7 KILVTCALPYANGPIHLGHMLEHIQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV + + S+ + +ISYD++ T + + + ++++++ + G I S Sbjct: 67 GVAPEQMIATVSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYRRLKENGFIKNRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160 + +++ + D KG A QY A ++P + + Sbjct: 127 QLFD-PEKSMFLPDRFVKGTCPKCKAADQYGDNCEVCGATYSPTELIDPKSAVSGATPVM 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E +FF L A+ D L + S L + N++ + SGL+ ++R +G + Sbjct: 186 RESEHFFFDLPAFSDMLQGWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADL-----HVIGKDILRFHA 272 +PD P YVW+DA Y+ + L + G +FW D H IGKDI+ FH+ Sbjct: 243 VPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDEFWRKDASTELYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P +F HG++ G K+SKS G I ++ + D LRY+ + Sbjct: 303 LFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKADTYLKHLDADCLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 ++ D + + +RVNAD+ N + NL SR+ I K +DG + A +D ++ Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGQL----ADQLADAALY 418 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 Q I E ++ +A+ ++++L +RY D Q PW + K A + Sbjct: 419 QTFIDAAQTIAEAYGSRESGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICS 478 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 479 MGINLFRVLMTYLKPVLPSLTER 501 >gi|121595776|ref|YP_987672.1| methionyl-tRNA synthetase [Acidovorax sp. JS42] gi|187645702|sp|A1WBH1|SYM_ACISJ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|120607856|gb|ABM43596.1| methionyl-tRNA synthetase [Acidovorax sp. JS42] Length = 688 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 150/541 (27%), Positives = 240/541 (44%), Gaps = 54/541 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K++++TA+ Y N HIGH E I AD R R+ G V F D HG I AA+ A Sbjct: 5 KIFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVNFVGADDAHGAPIMIAAEKA 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T + FV + + D I++D++ T +H+ + ++ + G I Sbjct: 65 GKTPQQFVADIAAGRKQYLDGFHIAFDNWSNTDSPENHELSQQIYLDLKAAGFIETRTIE 124 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161 ++ ++ + D KG A QY + NP + Sbjct: 125 QFFD-PEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCSSVYAPTDLINPYSALSGAKPVL 183 Query: 162 --EEGYFFRLSAYQD-KLLSYYESHPEFILP---------IERRNEVISFVKSGLKDLSL 209 E +FF+LS + + L+ + + + + P R GL D + Sbjct: 184 KTSEHFFFKLSDPRAVEFLTEWTQNGQHVQPEVAAKIKEWFGTRTNPDGTTSEGLDDWDI 243 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264 SR +GI+IPD P YVW+DA YL + L N G + AD H IG Sbjct: 244 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLNKRGEDYDAYMADPQLEQYHFIG 303 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVD 323 KDI+ FH ++WPA L + P K+ HGF+ ++ GEK+SKS G +DP++ + +G++ Sbjct: 304 KDIITFHTLFWPAMLKFSGRKTPTKICVHGFMTVNNGEKMSKSRGTGLDPLKYL-ALGMN 362 Query: 324 A--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 LRY+L ++ +D ++ + RVN+DL N+ SR+ I K + G + Sbjct: 363 PEWLRYYLGAKLNGKNEDIDFNPEDFMARVNSDLIGKYVNIASRAAGFIFKRFGGKL--- 419 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 G + +++L+ I + + RA+ + + L V+ Y DA KPWEL K Sbjct: 420 GEVSADGQALLAQLREQAGPIVAAYEARDTARAVRETMLLCDRVNSYVDANKPWELAKQE 479 Query: 441 --PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498 R V +E R L I L+ +P++A ++ L V E F + Q L G Sbjct: 480 GMEARLQDVCTTCIEAFRILTIYLKPILPQVAAEVARFLIVPPEQ--FAEVAQPLGAGHQ 537 Query: 499 L 499 + Sbjct: 538 I 538 >gi|52425686|ref|YP_088823.1| methionyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E] gi|68565974|sp|Q65S22|SYM_MANSM RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|52307738|gb|AAU38238.1| MetG protein [Mannheimia succiniciproducens MBEL55E] Length = 686 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 136/508 (26%), Positives = 240/508 (47%), Gaps = 49/508 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + ++ ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I A Sbjct: 4 QHRQILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLKA 63 Query: 63 QNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+T ++ D +++ D +IS+D++ T + + + +++ ++ + G I Sbjct: 64 DQMGITPEQLIADVKEKHYADFCG-FNISFDNYHSTHSEENRELSELIYSRLKENGFIKS 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM--------- 160 S + +++ + D KG A+ QY +A ++P + + Sbjct: 123 RTISQLFD-PEKSMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPTELINPRSAVSGA 181 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 E E +FF L +++ L + S L E N++ + +GL+ +SR Sbjct: 182 TPVIKESEHFFFDLPSFESMLKEWNRSGA---LQSEVANKMQEWFDAGLQQWDISRDAPY 238 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD-----LHVIGKDI 267 +G KIP YVW+DA Y+ + L +N D + FW D H IGKDI Sbjct: 239 FGFKIPGTENKYFYVWLDAPIGYMASFKNLCKRENLDFDR--FWNKDSNTELYHFIGKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FH+++WPA L AN P +F HG++ GEK+SKS G I ++ + + LRY Sbjct: 297 MYFHSLFWPAMLDGANYRKPTNIFVHGYVTVNGEKMSKSRGTFIQAATYLKHLDPECLRY 356 Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + +++ D + D +RVN DL N + NL SR+ I K +DG + A Sbjct: 357 YYAAKLSNRIDDLDLNLDDFVQRVNTDLVNKLVNLASRNAGFIQKRFDGKL----ADKLE 412 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-- 444 DES+ + ++I +N+ +A+ ++++L + ++Y D + PW + K A Sbjct: 413 DESLFAEFIAQSEQIAAYYENREFGKAIREIMALTDKANKYVDDKAPWVIAKEEGREAEL 472 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANK 472 V + +++ R L L+ +PKLA + Sbjct: 473 QAVCSMGIQLFRVLMGYLKPVLPKLAER 500 >gi|154150363|ref|YP_001403981.1| methionyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8] gi|187647736|sp|A7I6H7|SYM_METB6 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|153998915|gb|ABS55338.1| methionyl-tRNA synthetase [Methanoregula boonei 6A8] Length = 662 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 131/509 (25%), Positives = 234/509 (45%), Gaps = 40/509 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + L ++ + Y N H+GH + AD R+ R G +V+F +G+D HG I +A+ Sbjct: 3 KPPLLVTCGLPYTNGPCHLGHLRTYVPADCYVRYMRRTGEEVVFVSGSDNHGTPIVVSAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + +Q R+F + + +S+D F T + H + + +++ D G +YK Sbjct: 63 EQGTTPRALSEQYHRHFDETFRRMGVSFDHFGMTDDPACHHRTQDIVQRLVDNGYVYKQV 122 Query: 124 YSGWYSLRDEAYYND----------------DEVYKGADGQYYNAQ-HNPV--------Q 158 + Y + + + D DE +G + +PV + Sbjct: 123 VNQAYCPKCKRFLPDRYVEGICPYCGKQARGDECDQGCGKHLEPGEIKDPVCKICGTKAE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + +E YF +LSA++D LL + ++ RN I ++K L D ++R T +WG+ Sbjct: 183 FRNQEHYFLKLSAFRDYLLPFLDN---LKGTSNARNYAIGWIKDELHDWCITR-TLEWGV 238 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD---LHVIGKDILRFHAIY 274 K P ++YVW+DA Y+ T +G K +W D H IG DI+ H I+ Sbjct: 239 KFPGRDDLVVYVWVDAPIGYIAFTEEWAKENGRDWKRYWCKDNRVTHFIGGDIIYHHCIF 298 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVRE 332 WP L A P V + G + K SKS G V+ + + G+ D LRY+L+ Sbjct: 299 WPGLLKGAGYGEPYAVVASGMVKVDDHKFSKSRGYVVWTNDDYLDKGLPADCLRYYLLAY 358 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 + K+ + +R+N ++ N +GN + R++ K++ G+ PG D +IL+ Sbjct: 359 TSHTKELNFSWKVFGERINNEVVNILGNFLYRTLFFAHKEFGGV---PGG--SVDPAILA 413 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + + + + MQ A+ V+ L + + Y PW+L KT+ A+ V+ + Sbjct: 414 EIEKCQKSVDDQMQAYEFKGAVDTVMGLAAFGNTYIQTNAPWKLIKTDRAAAAQVIKNGI 473 Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++ + L +L++ +P A + + L D Sbjct: 474 QIAKALCLLIEPVMPVKAQECWAQLGYID 502 >gi|212716519|ref|ZP_03324647.1| hypothetical protein BIFCAT_01445 [Bifidobacterium catenulatum DSM 16992] gi|212660506|gb|EEB21081.1| hypothetical protein BIFCAT_01445 [Bifidobacterium catenulatum DSM 16992] Length = 620 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 156/554 (28%), Positives = 253/554 (45%), Gaps = 73/554 (13%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A Sbjct: 4 ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ + ++ +R +D+ D L +SYD F RTT H + L+K+ G IYKG Sbjct: 64 GVSAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEQVVQELFKQCLANGYIYKGTQ 122 Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158 S +L D Y GADG + NPV + Sbjct: 123 KVAISPSTGRTLPDR-YIEGTCPICGADGARGDQCDACGNELDPDELLNPVSKINGETPR 181 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216 + E E +F L A + L++ ++ + R VI+F K++ T DW Sbjct: 182 FEETEHFFLDLPALAEANLAWLKTREGW------RTNVINFSIGLFKEVKPRAITRDIDW 235 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVI 263 GI +P D+P +YVW DA+ YL+ + +P+ +A +W + + Sbjct: 236 GIPVPVAGWIDNPNKKLYVWFDAVIGYLSASIEWARRKGDPEAWRA-WWNDPETPGYYFM 294 Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WP+ +L N L +P++V + F+ +G+K S S G Sbjct: 295 GKDNITFHSQIWPSEMLGYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGI 354 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI +++ VDA+RY++ D + + N +LA GNLV+R +++ Sbjct: 355 VIYVKDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLM 414 Query: 370 LKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 K++ G IP T+ D ++LS + ++N AL++ + +V ++++Y Sbjct: 415 NKNF-GEIPALDENEMTDEDRALLSETKAAFNTVGSLIENHRQKNALSEAMRVVGDINKY 473 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487 A +PW++K NP R TVL+V + + LL F+P A K+++ L Sbjct: 474 ISATEPWKIKD-NPARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLP 532 Query: 488 SLDQRL---KPGFM 498 L++ KPGFM Sbjct: 533 RLEEVEDLDKPGFM 546 >gi|222111976|ref|YP_002554240.1| methionyl-tRNA synthetase [Acidovorax ebreus TPSY] gi|254782860|sp|B9MEX0|SYM_DIAST RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|221731420|gb|ACM34240.1| methionyl-tRNA synthetase [Acidovorax ebreus TPSY] Length = 688 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 150/541 (27%), Positives = 240/541 (44%), Gaps = 54/541 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K++++TA+ Y N HIGH E I AD R R+ G V F D HG I AA+ A Sbjct: 5 KIFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVNFVGADDAHGAPIMIAAEKA 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T + FV + + D I++D++ T +H+ + ++ + G I Sbjct: 65 GKTPQQFVADIAAGRKQYLDGFHIAFDNWSNTDSPENHELSQQIYLDLKAAGFIETRTIE 124 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161 ++ ++ + D KG A QY + NP + Sbjct: 125 QFFD-PEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCSSVYAPTDLINPYSALSGAKPVL 183 Query: 162 --EEGYFFRLSAYQD-KLLSYYESHPEFILP---------IERRNEVISFVKSGLKDLSL 209 E +FF+LS + + L+ + + + + P R GL D + Sbjct: 184 KTSEHFFFKLSDPRAVEFLTEWTQNGQHVQPEVAAKIKEWFGTRTNPDGTTSEGLDDWDI 243 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264 SR +GI+IPD P YVW+DA YL + L N G + AD H IG Sbjct: 244 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLNKRGEDYDAYMADPQLEQYHFIG 303 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVD 323 KDI+ FH ++WPA L + P K+ HGF+ ++ GEK+SKS G +DP++ + +G++ Sbjct: 304 KDIITFHTLFWPAMLKFSGRKTPTKICVHGFMTVNNGEKMSKSRGTGLDPLKYL-ALGMN 362 Query: 324 A--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 LRY+L ++ +D ++ + RVN+DL N+ SR+ I K + G + Sbjct: 363 PEWLRYYLGAKLNGKNEDIDFNPEDFMARVNSDLIGKYVNIASRAAGFIFKRFGGKL--- 419 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 G + +++L+ I + + RA+ + + L V+ Y DA KPWEL K Sbjct: 420 GEVSADGQALLAQLREQAGPIVAAYEARDTARAVRETMLLCDRVNSYVDANKPWELAKQE 479 Query: 441 --PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498 R V +E R L I L+ +P++A ++ L V E F + Q L G Sbjct: 480 GMEARLQDVCTTCIEAFRILTIYLKPILPQVAAEVARFLIVPPEQ--FAEVAQPLGAGHQ 537 Query: 499 L 499 + Sbjct: 538 I 538 >gi|311747941|ref|ZP_07721726.1| methionine--tRNA ligase [Algoriphagus sp. PR1] gi|126574911|gb|EAZ79269.1| methionine--tRNA ligase [Algoriphagus sp. PR1] Length = 686 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 153/535 (28%), Positives = 250/535 (46%), Gaps = 51/535 (9%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N HIGH A + +D+ R+ R G DVL+ G+DEHG I A+ G Sbjct: 11 ITSALPYANGPLHIGHLAGCYVPSDIYVRYLRSLGKDVLYVCGSDEHGVAITIKAKKEGK 70 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + VDQ + IS+D + RT+ K HH+T + +K + DKG+ + + Sbjct: 71 TPQQVVDQYHEIMKGSFQEFGISFDHYSRTSAKIHHETAQGFFKDLYDKGEFLEQSTEQY 130 Query: 128 YSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------------EE 162 + + D +E G + + +P + E Sbjct: 131 FDEEAGQFLADRYIEGTCPKCGNENAYGDQCEKCGSSLSPTDLIKPKSKLSGRTPVLKET 190 Query: 163 EGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKS------GLKDLSLSRKTFD 215 + +F L+ YQ L + E H + + +N V+ +S GL+ S++R D Sbjct: 191 KHWFLDLARYQSFLKKWIIEDHAD-----DWKNNVLGQCRSWLEAGDGLQARSMTRD-LD 244 Query: 216 WGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDIL 268 WGIK+P D ++YVW DA Y+++T +G + +W + +H IGKD + Sbjct: 245 WGIKVPLNDAEGKVLYVWFDAPIGYISSTKEWAAENGKDWEPYWKDEDTKLVHFIGKDNI 304 Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDAL 325 FH I +PA L + LP V ++ F+ +GEKIS S + E +EE D L Sbjct: 305 VFHCIIFPAILKTHGGYVLPDNVPANEFLNLEGEKISTSRNWAVWLHEYLEEFPGKQDVL 364 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 RY L KD + + R N++L GN V+R+V + K ++ +IP G T Sbjct: 365 RYVLTANAPETKDNDFTWKDFQGRNNSELVAIYGNFVNRAVVLTKKYFNDVIPERGELTG 424 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 DE +L + ++I +++ AL V+ L ++Y +PW++ KT+ R Sbjct: 425 YDEEVLEALAGFPEKIASSIERYRFREALGIVMDLARLGNKYLADTEPWKVIKTDEARTG 484 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-KPGFML 499 T+L + + + LAI+ + F+P ANK+ + LF DE + +S L K G +L Sbjct: 485 TILNIALNIAANLAIVSEPFLPFTANKLKE-LFGMDEFKWEESGQPELVKAGTVL 538 >gi|294635538|ref|ZP_06714018.1| methionine--tRNA ligase [Edwardsiella tarda ATCC 23685] gi|291091107|gb|EFE23668.1| methionine--tRNA ligase [Edwardsiella tarda ATCC 23685] Length = 682 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 134/504 (26%), Positives = 228/504 (45%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I ADV R+ R+ G V F D HG I AQ Sbjct: 12 KILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNQVHFICADDAHGTPIMLKAQQM 71 Query: 66 GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + SR + D AD ISYD++ T + + +++ ++ + G I Sbjct: 72 GIAPEQMIADVSREHQHDFAD-FQISYDNYHSTHSEENRQLASLIYTRLKENGFIKNRTI 130 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160 S Y ++ + D KG + + A ++P + + Sbjct: 131 SQLYD-PEKGMFLPDRFVKGTCPKCQSADQYGDNCEVCGATYSPTELINPKSVVSGATPI 189 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A+ L ++ S L + N++ + +SGL+ ++R +G Sbjct: 190 LRESEHFFFDLPAFGAMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDITRDAPYFGF 246 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271 +IPD P YVW+DA Y+ + L + G S +W + H IGKDI+ FH Sbjct: 247 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLSFDAYWSKESDAELYHFIGKDIVYFH 306 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G I + + D LRY+ Sbjct: 307 SLFWPAMLEGSGFRKPSNVFVHGYVTVNGAKMSKSRGTFIQARTYLNHLDPDCLRYYYAA 366 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K + G + T T +D ++ Sbjct: 367 KLSARIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFAGQLST----TLADPAL 422 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 EI + + + +A+ ++++L +RY D Q PW + K A + Sbjct: 423 YQTFVDAAAEIAQAYEARESGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 482 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L+ + Sbjct: 483 TMGLNLFRVLMTYLKPVLPALSAR 506 >gi|325507278|gb|ADZ18916.1| methionyl-tRNA synthetase [Chlamydophila psittaci 6BC] gi|328914829|gb|AEB55662.1| methionyl-tRNA synthetase [Chlamydophila psittaci 6BC] Length = 551 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 148/510 (29%), Positives = 235/510 (46%), Gaps = 44/510 (8%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++A+ Y N H GH A + ADV ARF RL G DVL+ G+DE+G I A+ Sbjct: 4 RVLITSALPYANGPLHFGHIAGAYLPADVYARFRRLLGDDVLYICGSDEYGIAITLNAER 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG+ + +VD + +D D L IS D F RTT H D + +K++ KG I Sbjct: 64 AGMGYQEYVDMYHKIHKDTFDKLGISIDFFSRTTNPFHKDLVQDFYKELKSKGLIENQIS 123 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQH------NPVQWM------- 160 YS + + D V + GA G Q A + NP + Sbjct: 124 LQLYSEEENRFLADRYVEGTCPKCGFDGARGDECQKCGADYEATDLVNPRSKLSGSQLVL 183 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E F L D LL+Y ++ LP R V ++K+ L+ +++R WGI Sbjct: 184 KETEHAFLHLERMVDPLLAYIDT---CYLPEHVRKFVTDYIKN-LRPRAITRD-LSWGIP 238 Query: 220 IPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIGKDILRFH 271 +PD P + YVW DA Y++ T L NPD K FW + + IGKD + FH Sbjct: 239 VPDFPNKVFYVWFDAPIGYISGTMDWAASLSNPDAWK-DFWLEESTEYVQFIGKDNIPFH 297 Query: 272 AIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 A +PA L ++P K + S F L +G + SKS GN +D ++ +D LRY L Sbjct: 298 AAIFPAMELGQSIPYKKMDALVSSEFYLLEGYQFSKSEGNYVDIDSFLDTYSLDKLRYVL 357 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDE 388 D + K R N++L GN ++R ++ K+ + + + + D Sbjct: 358 AATAPETSDSEFTFIDFKTRCNSELVGKFGNFINRVLAFAEKNGFKELAYSTDLLEDQDR 417 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTV 447 L +++++ +E+ + +A ++ L + + YF+ Q PW+L K R + Sbjct: 418 KFLDHAQKIVRDAQEHYSKYSLRKACCAIMELAALGNVYFNDQAPWKLLKEGFTHRVEAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L+ + LA++ +P A +I+ +L Sbjct: 478 LFCACYCQKLLALISYPIIPGTAWEIWRML 507 >gi|213970875|ref|ZP_03398998.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1] gi|301383774|ref|ZP_07232192.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13] gi|302059918|ref|ZP_07251459.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40] gi|302130517|ref|ZP_07256507.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924398|gb|EEB57970.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1] Length = 682 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 141/546 (25%), Positives = 239/546 (43%), Gaps = 49/546 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +D + + D AD L + +D+F T + + +++ ++ D G I Sbjct: 61 RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164 + ++ + + D + G + + A + P + + Sbjct: 120 ATRSVTQYFDPEKKMFLADRFIKGTCPKCAAVDQYGDNCEKCGATYAPTDLKDPKSAISG 179 Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 +FF L A+ L S+ S L N++ ++ SGL+ +SR Sbjct: 180 ATPVLKDSKHFFFDLPAFDTMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKDI 267 +G +IPD+P YVW+DA Y+ + L PD +W D H IGKDI Sbjct: 237 YFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L A+L P V HG++ G+K+SKS G I ++ + + LRY Sbjct: 297 VNFHALFWPAMLEGADLRKPTGVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRY 356 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 357 YYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPEL 416 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRA 444 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 417 TDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEV 472 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFMLH 500 V + V + RQL I L+ +P LA L VA D+++ + Q L P L Sbjct: 473 QAVCALGVNLFRQLVIFLKPVLPNLAADAEKFLNVAPLTWDDHKTLLTHHQ-LNPFSALM 531 Query: 501 KTFDPI 506 DP+ Sbjct: 532 TRIDPL 537 >gi|225352686|ref|ZP_03743709.1| hypothetical protein BIFPSEUDO_04314 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156651|gb|EEG70045.1| hypothetical protein BIFPSEUDO_04314 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 620 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 156/554 (28%), Positives = 253/554 (45%), Gaps = 73/554 (13%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A Sbjct: 4 ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ + ++ +R +D+ D L +SYD F RTT H + L+K+ G IYKG Sbjct: 64 GVSAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEQVVQELFKQCLANGYIYKGTQ 122 Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158 S +L D Y GADG + NPV + Sbjct: 123 KVAISPSTGRTLPDR-YIEGTCPICGADGARGDQCDACGNELDPDELINPVSKINGETPR 181 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216 + E E +F L A + L++ ++ + R VI+F K++ T DW Sbjct: 182 FEETEHFFLDLPALAEANLAWLKTREGW------RTNVINFSIGLFKEVKPRAITRDIDW 235 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVI 263 GI +P D+P +YVW DA+ YL+ + +P+ +A +W + + Sbjct: 236 GIPVPVAGWIDNPNKKLYVWFDAVIGYLSASIEWARRKGDPEAWRA-WWNDPETPGYYFM 294 Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WP+ +L N L +P++V + F+ +G+K S S G Sbjct: 295 GKDNITFHSQIWPSEMLGYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGI 354 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI +++ VDA+RY++ D + + N +LA GNLV+R +++ Sbjct: 355 VIYVKDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLM 414 Query: 370 LKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 K++ G IP T+ D ++LS + ++N AL++ + +V ++++Y Sbjct: 415 NKNF-GEIPALDESEMTDEDRALLSETKAAFDTVGSLIENHRQKNALSEAMRVVGDINKY 473 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487 A +PW++K NP R TVL+V + + LL F+P A K+++ L Sbjct: 474 ISATEPWKIKD-NPARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLP 532 Query: 488 SLDQRL---KPGFM 498 L++ KPGFM Sbjct: 533 RLEEVEDLDKPGFM 546 >gi|28871289|ref|NP_793908.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000] gi|37999383|sp|Q87XN0|SYM_PSESM RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|28854539|gb|AAO57603.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000] gi|331015679|gb|EGH95735.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 682 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 141/546 (25%), Positives = 239/546 (43%), Gaps = 49/546 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +D + + D AD L + +D+F T + + +++ ++ D G I Sbjct: 61 RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164 + ++ + + D + G + + A + P + + Sbjct: 120 ATRSVTQYFDPEKKMFLADRFIKGTCPKCAAVDQYGDNCEKCGATYAPTDLKDPKSAISG 179 Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 +FF L A+ L S+ S L N++ ++ SGL+ +SR Sbjct: 180 ATPVLKDSKHFFFDLPAFDTMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKDI 267 +G +IPD+P YVW+DA Y+ + L PD +W D H IGKDI Sbjct: 237 YFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L A+L P V HG++ G+K+SKS G I ++ + + LRY Sbjct: 297 VNFHALFWPAMLEGADLRKPTGVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRY 356 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 357 YYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVDANAAPEL 416 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRA 444 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 417 TDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEV 472 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFMLH 500 V + V + RQL I L+ +P LA L VA D+++ + Q L P L Sbjct: 473 QAVCALGVNLFRQLVIFLKPVLPNLAADAEKFLNVAPLTWDDHKTLLTHHQ-LNPFSALM 531 Query: 501 KTFDPI 506 DP+ Sbjct: 532 TRIDPL 537 >gi|330877326|gb|EGH11475.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 682 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 141/546 (25%), Positives = 239/546 (43%), Gaps = 49/546 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +D + + D AD L + +D+F T + + +++ ++ D G I Sbjct: 61 RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164 + ++ + + D + G + + A + P + + Sbjct: 120 ATRSVTQYFDPEKKMFLADRFIKGTCPKCAAVDQYGDNCEKCGATYAPTDLKDPKSAISG 179 Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 +FF L A+ L S+ S L N++ ++ SGL+ +SR Sbjct: 180 ATPVLKDSKHFFFDLPAFDTMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKDI 267 +G +IPD+P YVW+DA Y+ + L PD +W D H IGKDI Sbjct: 237 YFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L A+L P V HG++ G+K+SKS G I ++ + + LRY Sbjct: 297 VNFHALFWPAMLEGADLRKPTGVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRY 356 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 357 YYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPEL 416 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRA 444 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 417 TDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEV 472 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFMLH 500 V + V + RQL I L+ +P LA L VA D+++ + Q L P L Sbjct: 473 QAVCALGVNLFRQLVIFLKPVLPNLAADAEKFLNVAPLTWDDHKTLLTHHQ-LNPFSALM 531 Query: 501 KTFDPI 506 DP+ Sbjct: 532 TRIDPL 537 >gi|261493681|ref|ZP_05990200.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494348|ref|ZP_05990842.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309997|gb|EEY11206.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310681|gb|EEY11865.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 692 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 134/505 (26%), Positives = 236/505 (46%), Gaps = 43/505 (8%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ K+ ++ A+ Y N H+GH E I AD+ RF R+ G +V F D HG I A Sbjct: 4 QKRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEVHFVCADDAHGTPIMLNA 63 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+T + +++ + +IS+D++ T + + ++K + G I Sbjct: 64 DKLGITPEQLIEKAKADHEADFASFNISFDNYHSTHSEENRQITTDIYKTLKANGFIKSK 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM---------- 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 124 VISQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGAT 182 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 E E +FF L +++ L + S L E N++ + +SGL+ +SR + Sbjct: 183 PVVKESEHFFFDLPSFEGMLKEWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRF 270 G +IPD YVW+DA Y+ + L + G +FW D H IGKDI+ F Sbjct: 240 GFEIPDAENKFFYVWLDAPIGYMASFKNLCDRAGIDFDEFWQKDSTTELYHFIGKDIVYF 299 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L + P VF+HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 HSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQANTYLKHLDPECLRYYYA 359 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 ++ +D ++ D +RVN+D+ N + NL SR+ S I K ++G + A DE+ Sbjct: 360 AKLNDRIEDLDFNLDDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----AEKLDDEA 415 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + + I +N+ ++A+ ++ L + ++Y D + PW + K A V Sbjct: 416 LFNEFTAQAETIANFYENREFNKAIRAIMELTDKANKYIDDKAPWVIAKEEGKEAELQAV 475 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +PKLA + Sbjct: 476 CSMGIELFRVLMSYLKPVLPKLAER 500 >gi|145480273|ref|XP_001426159.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124393232|emb|CAK58761.1| unnamed protein product [Paramecium tetraurelia] Length = 842 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 111/347 (31%), Positives = 179/347 (51%), Gaps = 45/347 (12%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K I+T + Y NAQPHIGH Y MI AD +A++ + L TGTDEHG K+ ++A+N Sbjct: 393 KQIITTPLFYVNAQPHIGHLYSMIYADAIAKYKSVKLL-----TGTDEHGLKVYRSAKNQ 447 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + + + D S F+ +A+ I YD F+RTT+ +H + W + + G I K Y Sbjct: 448 PI--QQYCDSISNQFQQLANSF-IKYDHFVRTTDPQHIMKVQKNWNLLQNNGFILKDTYK 504 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G+Y +E++ N H Q++EEE YFF+ +D L + P Sbjct: 505 GYYCQVEESFVN----------------HKTDQYLEEENYFFKFD--KDYLETCITKAPS 546 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245 +NE+ + + + +S ++ + WGI++P+D ++YVW+DAL YL + Sbjct: 547 -----RYQNELKQLIINSIC-ISRPKQRYYWGIEVPNDANQLIYVWLDALLGYLQEEQH- 599 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 +HVIGKDI+RFHA+YWP+FL N ++ H + K+SK Sbjct: 600 ------------HYMHVIGKDIVRFHALYWPSFLKGINNQSTTELIVHNHWIRNNMKMSK 647 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 SLGNVIDP ++++ + +R + + + D +++ L+K N Sbjct: 648 SLGNVIDPFQLLKTYNQNQIRLYFLTQGPQNMDVSFEEQKLEKCWNT 694 >gi|332039844|gb|EGI76239.1| methionyl-tRNA synthetase [Hylemonella gracilis ATCC 19624] Length = 705 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 157/558 (28%), Positives = 252/558 (45%), Gaps = 59/558 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M KL+++TA+ Y N HIGH E I AD+ RF R+ G +V F D HG I Sbjct: 1 MPMPRKLFVTTALPYANGNFHIGHIMEYIQADIWVRFQRMRGHEVHFVGADDAHGAPIMI 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ AG T + FV + + D I++D++ T +H + +++ + G I Sbjct: 61 AAEKAGKTPQQFVADIAAGRKPYLDGFHIAFDNWSSTDSPENHALSQAIYRDLKAAGLIA 120 Query: 121 KGCYSGWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWM--- 160 +Y + + D E K GA QY ++ NP + Sbjct: 121 TKTIEQFYDPQKNMFLPDRFIKGECPKCGAKDQYGDSCEVCGAVYAPTELKNPYSALSGA 180 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPE-FILPIERRNEVISFV------KSGLKDLS 208 E YFF+LS + L + ++ + L E N++ + K GL D Sbjct: 181 TPVLKSSEHYFFKLS--DPRCLEFLQNWTQDGKLQTEVANKIREWFTKDADGKGGLGDWD 238 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263 +SR +GI+IPD P YVW+DA YL + G + + AD +H I Sbjct: 239 ISRDAPYFGIEIPDAPSKYFYVWLDAPVGYLASLKNYLGKIGIDYERYIADPAVEQVHFI 298 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGV 322 GKDI+ FH ++WPA L + P +V HGF+ ++ GEK+SKS G +DP++ + +G+ Sbjct: 299 GKDIVYFHTLFWPAMLHFSGRKTPNQVNVHGFLTVNNGEKMSKSRGTGLDPLKYL-SLGM 357 Query: 323 DA--LRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 + LRY+L +++ +D ++++ RVN+DL N+VSR+ + K + G + Sbjct: 358 NPEWLRYYLAAKLSGKNEDIDFNREDFMLRVNSDLIGKYVNIVSRAAGFLSKRFGGRLTQ 417 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK- 438 +F ++L + + +AL +++L V+ Y D KPWEL K Sbjct: 418 --SFDAQGAALLQDIHAAAPALAALYDGRDYGKALRDIMALADRVNGYTDEHKPWELAKD 475 Query: 439 -TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI----------FDILFVADENRCFQ 487 N R V V V L L +P LA ++ +D+ + +Q Sbjct: 476 PLNDARLHQVCSVLVNAFAALTRYLTPVLPALARQVETLTGLPMGRWDVQQSVAAIQPYQ 535 Query: 488 SLDQRLKPGFMLHKTFDP 505 L QR+ P +L F+P Sbjct: 536 HLMQRVDPK-LLDALFEP 552 >gi|302348036|ref|YP_003815674.1| Methionyl-tRNA synthetase [Acidilobus saccharovorans 345-15] gi|302328448|gb|ADL18643.1| Methionyl-tRNA synthetase [Acidilobus saccharovorans 345-15] Length = 576 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 145/511 (28%), Positives = 245/511 (47%), Gaps = 45/511 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K +++A Y N PH+G ++ ADV AR+ +L G DV+F TG+DEHG I A+ Sbjct: 3 KYIVASAWPYSNFIPHLGTVLHLLSADVYARYLKLMGHDVVFVTGSDEHGTPIELEARKR 62 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ K DQ ++ + + + RT H + R + + +G ++ Sbjct: 63 GIKPKELTDQVHAYDVELFKKFEFDFSLYSRTESPIHKEFVREFFLNLQRRGYVFPQDEE 122 Query: 126 GWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQ--------WM 160 Y D+ + D + Y+ A G Q N NP W+ Sbjct: 123 MPYCPNDKMFLPDRFIEGTCPYCGYEHARGDQCDNCGRLLTPRDLINPRCAICGATPIWL 182 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + Y+ L Q+KLLS+ +S L +N I +VK GLK +L+R +WGI+ Sbjct: 183 KTTNYYIDLGKVQEKLLSWLQSSE---LQDSVKNYSIEWVKQGLKPRALTRD-IEWGIQA 238 Query: 221 PDD--PQYIMYVWIDALTNYLTTTG-YLDNPDG---SKAKFW--PA--DLHVIGKDILRF 270 P + +YVW DAL Y++ T YL + G S ++W P+ ++ IGKD + F Sbjct: 239 PFEGAENKTIYVWFDALLGYVSATKEYLMSKGGDENSWKQWWFDPSTRSVYFIGKDNIPF 298 Query: 271 HAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDALR 326 H+I P+ +++ P LP ++ + ++L++G SKS +G ID E +E D R Sbjct: 299 HSIILPSLFMASGDPYVLPWRISATDYLLYEGRHFSKSRRVGVWID--EALEIAPADYWR 356 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + L+R D + + VN++L + IGNL R +S + +DG++P A Sbjct: 357 WALIRMRPESGDVSFQWKEFYRIVNSELNDDIGNLAYRVLSFVKSRFDGVMPPATAPDTR 416 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 D+ L + + ++ E+M N + RA V+ + +RY + PW+L K + +RA T Sbjct: 417 DKETLEEATSLASKVIEHMDNVELKRASEFVLEVARLGNRYLNESAPWDLIKRDRERAGT 476 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V+ V +++ +A L+ F+P +A ++ L Sbjct: 477 VINVAASIVKTVAHLITPFMPSIAEDLWHQL 507 >gi|193215432|ref|YP_001996631.1| methionyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110] gi|226710901|sp|B3QT85|SYM_CHLT3 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|193088909|gb|ACF14184.1| methionyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110] Length = 700 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 144/530 (27%), Positives = 242/530 (45%), Gaps = 58/530 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M + ++ ++TA+ Y N H+GH A + AD+ RF RL G DV+ G+DEHG I Sbjct: 1 MSQYKRTLVTTALPYANGPVHLGHLAGVYLPADIYVRFKRLKGEDVIHIGGSDEHGVPIT 60 Query: 60 KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 A GV+ +V VD+ ++RN A IS+D + RT+ HH+T + + I KG Sbjct: 61 LTADKEGVSPQVVVDRYHNRNSEAFAKC-GISFDHYGRTSSPVHHETAQEFFLDIEKKGI 119 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGAD---------------GQYYNAQH--NPVQWM- 160 K +Y + +D V G Y +A NP + Sbjct: 120 FTKKVEKQFYDEESRHFLSDRYVTGTCPVCGNPDANGDQCEKCGTYLSANELINPKSKLT 179 Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSL 209 E ++F L +Q KL + E H + R VI++ ++ GL D ++ Sbjct: 180 GKTPILKETLHWYFPLGRFQKKLEDFIEGHAK-----TWRQNVINYSRTWLRQGLGDRAI 234 Query: 210 SRKTFDWGIKIP----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD-- 259 +R WG+K+P + ++YVW DA+ Y+++T PD K +W + Sbjct: 235 TRD-LPWGVKVPLEGEEAKDKVLYVWFDAVLGYISSTKEWAAKQGQPDLWKT-YWQSPET 292 Query: 260 --LHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFILHKGEKISKSLGNVI 311 +H IGKD + FHA+ +PA L++ N L V + F+ +G+K SKS + Sbjct: 293 RLIHFIGKDNVVFHALMFPAILMAKNENADAQYVLVDNVPASEFMNFEGKKFSKSRNYAV 352 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 E +E+ D LRY L +D + + R N +LA+ +GN V R+V Sbjct: 353 YLHEFLEKFPADTLRYSLAINYPESRDTDFSWKDFQNRTNGELADTLGNFVKRAVDFTNS 412 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 + G +P E ++ ++ E ++N I A + +RY Sbjct: 413 KFQGEVPAECTI-EDWNALGEGWHGGFKKYEEALENFHIREACFTAMDFARFANRYLTES 471 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 +PW++ KT P++A+ ++ + + + LA + +P+ + KIFD+L V++ Sbjct: 472 EPWKVIKTEPEKAAKIMAMALNLCETLATVFAPILPETSAKIFDMLGVSE 521 >gi|270261058|ref|ZP_06189331.1| methionyl-tRNA synthetase [Serratia odorifera 4Rx13] gi|270044542|gb|EFA17633.1| methionyl-tRNA synthetase [Serratia odorifera 4Rx13] Length = 722 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 130/504 (25%), Positives = 228/504 (45%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +KL ++ A+ Y N H+GH E I AD+ R+ R+ G +V F D HG I AQ Sbjct: 53 KKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHEVHFICADDAHGTPIMLKAQQ 112 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + S+ + ISYD++ T + + +++ ++ + G I Sbjct: 113 LGIKPEEMIAEMSQEHQQDFAGFGISYDNYHSTHSDENRELSSLIYGRLKENGFIKNRTI 172 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + ++ Sbjct: 173 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPI 231 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 232 LRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 288 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271 +IPD P YVW+DA Y+ + L + G +FW D H IGKDI+ FH Sbjct: 289 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLDFDEFWRKDSSTELYHFIGKDIVYFH 348 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L +N P +F HG++ G K+SKS G I ++ + D LRY+ Sbjct: 349 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAA 408 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K + G + A +D ++ Sbjct: 409 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFGGQL----ADNLADPAL 464 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 I E ++ RA+ ++++L +RY D Q PW + K A + Sbjct: 465 YQTFVDAAGSIAEAYASRESGRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 524 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 525 SMGINLFRVLMTYLKPVLPSLTER 548 >gi|37525501|ref|NP_928845.1| methionyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii TTO1] gi|68565992|sp|Q7N6J6|SYM_PHOLL RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|36784929|emb|CAE13847.1| methionyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii TTO1] Length = 675 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 134/504 (26%), Positives = 228/504 (45%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +KL ++ A+ Y N H+GH E I AD+ RF R+ G +V F D HG I AQ Sbjct: 6 KKLLVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGKEVHFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + ++ +SYD++ T + + ++ ++ G I Sbjct: 66 MGIAPEEMIATVNQEHHQDFTGFSVSYDNYHSTHSEENQTLSTKIYLELKKNGHIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160 S Y + D V KG A+ QY + ++P + + Sbjct: 126 SQLYDPEKNMFLPDRFV-KGSCPKCKAEDQYGDNCEVCGSTYSPTELINPRSAVSGATPE 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A+ D L ++ S L + N++ + +SGL+ ++R +G Sbjct: 185 MRETEHFFFDLPAFSDMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDITRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271 +IPD P YVW+DA Y+ + L + G+ +FW D H IGKDI+ FH Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFQNLCDKRGNLNFDEFWAKDSTADLYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G I ++ + D LRY+ Sbjct: 302 SLFWPAMLEGSGYRKPTNVFVHGYVTVNGAKMSKSRGTFIKASTYLDHLDADCLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVN+D+ N + NL SR+ I K ++G + A +D ++ Sbjct: 362 KLSARIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFINKRFNGKL----ADKLADPAL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 + I E N+ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 YQQFIDGAKVIAEEFNNREFSKAIREIMALADLANRYVDEQAPWVVAKEEGRDADLQAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P LA + Sbjct: 478 SMGINLFRVLMTFLKPVLPSLAER 501 >gi|29840409|ref|NP_829515.1| methionyl-tRNA synthetase [Chlamydophila caviae GPIC] gi|33301687|sp|Q822N0|SYM_CHLCV RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|29834758|gb|AAP05393.1| methionyl-tRNA synthetase [Chlamydophila caviae GPIC] Length = 550 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 145/509 (28%), Positives = 233/509 (45%), Gaps = 43/509 (8%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++A+ Y N H GH A + ADV ARF RL G DVL+ G+DE+G I A+ Sbjct: 4 RVLITSALPYANGPLHFGHIAGAYLPADVYARFRRLLGDDVLYICGSDEYGIAITLNAER 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + +V + +D D L IS D F RTT H + ++ KG + Sbjct: 64 VGLGYQEYVSMYHKVHKDTFDKLGISLDFFSRTTNPFHKAIVEDFYLELKSKGLVENQIS 123 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQH------NPVQWM------- 160 YS ++ + D V + GA G Q A + NP + Sbjct: 124 FQLYSEDEKRFLADRYVEGTCPKCGFDGARGDECQKCGADYEATDLINPRSKLSGSQLVL 183 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E +F L + LL++ E LP R V+ ++K+ L+ +++R WGI Sbjct: 184 KETEHAYFHLERMVEPLLAFIEKA---YLPEHIRKFVVDYIKN-LRPRAITRD-LSWGIP 238 Query: 220 IPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIGKDILRFH 271 +PD P + YVW DA Y++ T ++ PD K FW + + IGKD + FH Sbjct: 239 VPDFPNKVFYVWFDAPIGYISATMDWAASVNTPDLWK-DFWLEESTEYVQFIGKDNIPFH 297 Query: 272 AIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 A +PA L ++P K + S F L +G + SKS GN +D ++ +D LRY L Sbjct: 298 AAIFPAMELGQSIPYKKMNALISSEFYLLEGAQFSKSEGNFVDMDAFLDTYSLDKLRYVL 357 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 D + K R N++L GN ++R ++ K+ + P A + D Sbjct: 358 AATAPETSDSEFTFLDFKTRCNSELVGKFGNFINRVLAFAEKNGFRELTCPEALEDKDRQ 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVL 448 L C R++QE + + +A + ++ L + + YF+ Q PW+L K R +L Sbjct: 418 FLDDCQRIVQEAQAYYSKYSLRKACSAIMELAALGNVYFNDQAPWKLLKEGFAHRVEAIL 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + LA++ +P A +I+++L Sbjct: 478 FCACYCQKLLALIAYPILPGTAWEIWNML 506 >gi|319764075|ref|YP_004128012.1| methionyl-tRNA synthetase [Alicycliphilus denitrificans BC] gi|330823650|ref|YP_004386953.1| methionyl-tRNA synthetase [Alicycliphilus denitrificans K601] gi|317118636|gb|ADV01125.1| methionyl-tRNA synthetase [Alicycliphilus denitrificans BC] gi|329309022|gb|AEB83437.1| methionyl-tRNA synthetase [Alicycliphilus denitrificans K601] Length = 689 Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 150/542 (27%), Positives = 236/542 (43%), Gaps = 56/542 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K++++TA+ Y N HIGH E I AD R R+ G V F D HG I AA+ A Sbjct: 5 KIFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVDFVGADDAHGAPIMIAAEKA 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T + FV + + D I++D++ T +H + ++ + G I Sbjct: 65 GKTPQQFVADIAAGRKQYLDGFHIAFDNWHSTDAPENHALAQQIYLDLKANGLIETRTIE 124 Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPV--------------QWM 160 ++ + D + G + + A + P Q Sbjct: 125 QFFDPEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCGAVYAPTELINPYSALSGAKPQLK 184 Query: 161 EEEGYFFRLSAYQDKLLSYYES--------HPEFILPIER----RNEVISFVKSGLKDLS 208 E +FF+LS + + + + PE I+ R SGL D Sbjct: 185 TSEHFFFKLS--DPRCVEFLKEWTQDGVHVQPEVAAKIKEWFGTRTNPDGSTSSGLDDWD 242 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263 +SR +GI+IPD P YVW+DA YL + L G + AD H I Sbjct: 243 ISRDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNLLARRGQDYAAYMADPALEQYHFI 302 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGV 322 GKDI+ FH ++WPA L + P K+ HGF+ ++ GEK+SKS G +DP++ + +G+ Sbjct: 303 GKDIITFHTLFWPAMLKFSGRKTPTKICVHGFMTVNNGEKMSKSRGTGLDPLKYL-SLGM 361 Query: 323 DA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 + LRY+L ++ +D ++ + RVNADL N+ SR+ I K + G + Sbjct: 362 NPEWLRYYLGAKLNGRNEDIDFNPEDFMARVNADLIGKYVNIASRAAGFITKRFGGKL-- 419 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 G +E +++L+ I + + RA+ + + L V+ Y DA KPWEL K Sbjct: 420 -GTVSEDGQALLAQLRAHKDAIVAAYEARDTARAVRETMLLCDRVNAYVDANKPWELAKK 478 Query: 440 N--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497 R V +E R L I L+ +P++A + L V E F +D+ L G Sbjct: 479 EGMEARLQDVCSTCIEAFRILTIYLKPILPQVAADVAAFLIVPPEQ--FDGVDRPLGAGH 536 Query: 498 ML 499 + Sbjct: 537 QI 538 >gi|253990367|ref|YP_003041723.1| methionyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781817|emb|CAQ84980.1| methionyl-tRNA synthetase [Photorhabdus asymbiotica] Length = 675 Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 134/504 (26%), Positives = 229/504 (45%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ RF R+ G +V F D HG + AQ Sbjct: 7 KLLVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGKEVHFICADDAHGTPVMLKAQQM 66 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + N + +D +SYD++ T K + + ++ + G I Sbjct: 67 GIAPEEMIAAVNQEHHQDFIG-FSVSYDNYHSTHSKENQELSTKIYLALKKNGHIKSRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160 S Y ++ + D KG A+ QY + ++P + + Sbjct: 126 SQLYD-PEKGMFLPDRFVKGSCPKCKAEDQYGDNCEVCGSTYSPTELLNPRSAVSGATPE 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A+ + L ++ S L + N++ + +SGL+ ++R +G Sbjct: 185 MRETEHFFFDLPAFSNMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDITRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271 +IPD P YVW+DA Y+ + L + G+ + FW D H IGKDI+ FH Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFQNLCDKRGNLSFDDFWAKDSTADLYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G I ++ + D LRY+ Sbjct: 302 SLFWPAMLEGSGYRKPTNVFVHGYVTVNGAKMSKSRGTFIKASTYLDHLDADCLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVN+D+ N + NL SR+ I K + G + A +D ++ Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFINKRFSGKL----ADKLADPAL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 + I E N+ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 YQKFIDGAKVIEEEFNNREFSKAIREIMTLADLANRYVDEQAPWVVAKEEGRDADLQAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P LA + Sbjct: 478 SMGINLFRVLMTFLKPVLPNLAER 501 >gi|86140954|ref|ZP_01059513.1| methionyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217] gi|85832896|gb|EAQ51345.1| methionyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217] Length = 693 Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 145/516 (28%), Positives = 239/516 (46%), Gaps = 39/516 (7%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I+ A+ Y N HIGH A + AD+ AR+ R G DV + G+DEHG I+ A+ G+ Sbjct: 8 ITAALPYTNGPIHIGHLAGVYVPADIYARYLRGMGKDVAYICGSDEHGVAISIKAKKEGI 67 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + VD+ + +D + IS+D++ RT+ + HHDT +K + KGD + Sbjct: 68 TPQEVVDKYHKIIKDSFEDFGISFDNYSRTSAQVHHDTASEFFKTLYAKGDFIEEVTEQL 127 Query: 128 YSLRDEAYYND------------DEVYKGAD---GQYYNAQH--NPVQWM--------EE 162 + Y D +E Y G NA NP + E Sbjct: 128 FDAEANQYLADRFVTGTCPKCGHEEAYGDQCENCGSSLNATDLINPKSTISGSKPVLKET 187 Query: 163 EGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 +F L Y+D L + + H + P + S++ GL+ +++R DWGI +P Sbjct: 188 RHWFLPLDRYEDFLKKWILDGHKKDWKP-NVYGQCKSWIDEGLRPRAVTRD-LDWGIPVP 245 Query: 222 DDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRFHAIY 274 D ++YVW DA Y+++T +G + +W AD +H IGKD + FH I Sbjct: 246 VDGAEGKVLYVWFDAPIGYISSTKEWAAREGKNWEDYWKADDTKLVHFIGKDNIVFHCII 305 Query: 275 WPAFL-LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLVR 331 +P+ L + LP V ++ F+ +G K+S S + E +EE D LRY L Sbjct: 306 FPSMLEAEGSYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEEFPGQQDVLRYTLTA 365 Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 KD + + R N +L GN ++R V + K Y+G IP F DE +L Sbjct: 366 NAPETKDNDFTWADFQARNNNELVAIFGNFINRVVVLTNKYYEGKIPQALDFNAEDEKVL 425 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451 + I +++ A +++++ ++Y +PW+ KT+P+R TV+Y+ Sbjct: 426 AEMKAYPAVIASSIERYRFREAQNELMNVARLGNKYLADAEPWKTFKTDPERTKTVMYIA 485 Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487 +++ LA+L + F+P A + +L + E+ Q Sbjct: 486 LQIAGTLAVLSEPFLPHTAKTLKQMLNIESEDPLMQ 521 >gi|261749393|ref|YP_003257078.1| methionyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497485|gb|ACX83935.1| methionyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 561 Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 144/538 (26%), Positives = 254/538 (47%), Gaps = 40/538 (7%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K K ++ A Y N HIGH A + AD+ R+ R +V+F G+DEHG I Sbjct: 3 KSNNKYTVTAAFPYANGPIHIGHLAGVYLPADIFVRYLRRKKKEVIFICGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ T K V++ +D + I +D++ RT+ H +KK+ + I+ Sbjct: 63 QAKKENTTPKEIVNKYHFMIKDCFENFGIHFDNYSRTSTVIHQKISTSFFKKLHKEKKIF 122 Query: 121 KGCYSGWYSLRDEAYYNDDEVY--------KGADGQYYNA------------------QH 154 + +Y + + + D +Y K A G + Sbjct: 123 EKVSEQYYDNQAKQFLADRYIYGICPHCKHKEAYGDQCESCGSSLSPEELINPLSTISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 NPV + + ++F L+ YQ+ L + + + + S++ GL+ +++R Sbjct: 183 NPVL-KKTKHWYFPLNEYQNFLEKWILMDHQKDWKVNVYGQAKSWLDQGLQPRAITR-DL 240 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD----LHVIGKDILR 269 DWGI IP + ++YVW +A Y+++T + +W + IGKD + Sbjct: 241 DWGIPIPKEIGKVLYVWFEATIGYISSTIEWAKRKKKDWKPYWKDQRTKLIQFIGKDNIV 300 Query: 270 FHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDAL 325 FH I +PA L + N LP K+ ++ F+ + EKIS S + E + + D L Sbjct: 301 FHCIIFPAVLKAYNQGYILPDKILANEFLNLENEKISTSRNWGVWVHEYLRDFPNQQDTL 360 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 RY L+ + KD ++ +K N +L +GN V+RS+++I K +G+IP PG F+ Sbjct: 361 RYILIANMPEKKDNNFNWKDFQKTNNTELVAILGNFVNRSLTLIQKYNNGIIPHPGIFSI 420 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 +D+SIL + + I + +++ AL + L ++Y ++PW +KKT R Sbjct: 421 TDKSILKKIRKYPENIGDLIESFRFREALVCFMDLARLGNKYLTEEEPWNIKKTE-QRIE 479 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQSLDQRLKPGFMLHKT 502 T+LYV+++++ LA L + F+P ANK+ +L + A +++ + L PG +L K+ Sbjct: 480 TILYVSLQIVGMLAQLAELFLPYTANKLLKMLRLEAYFWNKIENVKEFLCPGHVLGKS 537 >gi|113461322|ref|YP_719391.1| methionyl-tRNA synthetase [Haemophilus somnus 129PT] gi|123031364|sp|Q0I3W7|SYM_HAES1 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|112823365|gb|ABI25454.1| methionyl-tRNA synthetase [Haemophilus somnus 129PT] Length = 683 Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 147/547 (26%), Positives = 250/547 (45%), Gaps = 61/547 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I A Sbjct: 7 QILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLKADQM 66 Query: 66 GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV ++ D ++ D + +IS+D++ T + + ++ K+ G I Sbjct: 67 GVKPEQLIADVQQKHMADFSG-FNISFDNYHSTHSDENRELVEAIYHKLKQNGFIKTRII 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160 S + ++A + D KG A+ QY +A ++P++ + Sbjct: 126 SQLFD-PEKAMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPIELISPRSTVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A++ L + S L E N++ + ++GL+ +SR +G Sbjct: 185 LKESEHFFFDLPAFESMLTEWIRSGS---LQQEVANKMQEWFEAGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV-----IGKDIL 268 KIP+ YVW+DA Y+ + N G K+ FW + H IGKDI+ Sbjct: 242 KIPNTDNKYFYVWLDAPIGYMAS---FKNLCGKKSGIDFDSFWSKESHAELYHFIGKDIM 298 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH+++WPA L A+L P +F HG++ GEK+SKS G I ++ + + LRY+ Sbjct: 299 YFHSLFWPAMLDGASLRKPNNIFVHGYVTVNGEKMSKSRGTFIQAATYLKYLDPECLRYY 358 Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ D + D +RVN DL N + NL SR+ S I K +DG + A D Sbjct: 359 YAAKLGSRIDDLDLNLDDFVQRVNTDLVNKLVNLASRNASFIQKRFDGKL----ADKLDD 414 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445 + + + I + +N+ +A+ ++++L + ++Y D + PW + K + D Sbjct: 415 KMLFDEFIAQSELIADYYENREFGKAIREIMALTDKANKYVDEKAPWVIAKDESRTDELQ 474 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLDQRLKPGFMLHKTF 503 V + +E+ R L L+ +P LA + L + EN LD ++ P F Sbjct: 475 QVCSMGIELFRVLIGYLKPVLPNLAARAEAFLNTQLTWENVASPLLDHQIAP-------F 527 Query: 504 DPIFPRF 510 P+F R Sbjct: 528 KPLFSRL 534 >gi|254361962|ref|ZP_04978093.1| methionine--tRNA ligase [Mannheimia haemolytica PHL213] gi|153093509|gb|EDN74489.1| methionine--tRNA ligase [Mannheimia haemolytica PHL213] Length = 692 Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 134/505 (26%), Positives = 236/505 (46%), Gaps = 43/505 (8%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ K+ ++ A+ Y N H+GH E I AD+ RF R+ G +V F D HG I A Sbjct: 4 QKRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEVHFVCADDAHGTPIMLNA 63 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+T + +++ + +IS+D++ T + + ++K + G I Sbjct: 64 DKLGITPEQLIEKAKADHEADFASFNISFDNYHSTHSEENRQITTDIYKTLKANGFIKSK 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM---------- 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 124 VISQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGAT 182 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 E E +FF L +++ L + S L E N++ + +SGL+ +SR + Sbjct: 183 PVVKESEHFFFDLPSFEGMLKEWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRF 270 G +IPD YVW+DA Y+ + L + G +FW D H IGKDI+ F Sbjct: 240 GFEIPDAENKFFYVWLDAPIGYIASFKNLCDRAGIDFDEFWQKDSTTELYHFIGKDIVYF 299 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L + P VF+HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 HSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQANTYLKHLDPECLRYYYA 359 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 ++ +D ++ D +RVN+D+ N + NL SR+ S I K ++G + A DE+ Sbjct: 360 AKLNDRIEDLDFNLDDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----AEKLDDEA 415 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + + + I +N+ ++A+ ++ L + ++Y D + PW + K A V Sbjct: 416 LFNEFTAQAETIANFYENREFNKAIRAIMELTDKANKYIDDKAPWVIAKEEGKEAELQAV 475 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +PKLA + Sbjct: 476 CSMGIELFRVLMSYLKPVLPKLAER 500 >gi|194336292|ref|YP_002018086.1| methionyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] gi|226710911|sp|B4SGQ6|SYM_PELPB RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|194308769|gb|ACF43469.1| methionyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] Length = 700 Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 141/542 (26%), Positives = 247/542 (45%), Gaps = 63/542 (11%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K ++TA+ Y N H+GH A + AD+ R+ RL G D++ G+DEHG I A+ Sbjct: 6 KTLVTTALPYANGPVHLGHLAGVYLPADLYVRYMRLKGEDIIHIGGSDEHGVPITITAER 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ K VD+ R + IS+D + RTT + HH T + + I +KG + Sbjct: 66 EGISPKDVVDRYHRMNSEAFSKCGISFDYYGRTTSEVHHKTAQEFFTDIEEKGIFIRKSE 125 Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM------------- 160 ++ + + + +D V G + +P++ + Sbjct: 126 KLFFDRKADRFLSDRYVTGTCPICNNTEANGDQCEQCGTHLSPLELINPKSKLSDATPEL 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRKTFD 215 E ++F L +QD+L SY H + + R V+++ +K GLKD +++R Sbjct: 186 RETMHWYFPLGRFQDQLESYVHQHED-----DWRQNVLNYTHTWLKQGLKDRAITRD-LS 239 Query: 216 WGIKIPDDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPAD----LHVIG 264 WGIK+P + + ++YVW DA+ Y++ T G + +W LH IG Sbjct: 240 WGIKVPLESEEAEGKVLYVWFDAVLGYISFTREWAEKLGQSERWKEYWQNPECRLLHFIG 299 Query: 265 KDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 KD + FH + PA L++ N L V + F+ +G K SKS + E + Sbjct: 300 KDNVVFHTLMLPAILMAWNEGRQSECYNLADNVPASEFMNFEGRKFSKSRNYAVYLGEFL 359 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E+ D LRY + KD + + R N +LA+ +GN + RSV +DG + Sbjct: 360 EKFPADTLRYSIAMNYPENKDTDFSWQDFQNRTNGELADTLGNFIKRSVDFTNARFDGEV 419 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P ++E + + +C ++ +I A++ + + +R+ +PW+L Sbjct: 420 PWD--YSEDLLNNVLLCDQI-DDIARAYDGFHFREAVSSSMDIARNANRFLTQNEPWKLI 476 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497 KT+PD A+ V+ +++ + L+IL +P+ N+I +L ++D +KPG Sbjct: 477 KTDPDAAARVMSISLNLCHALSILFYPVIPETCNRIHAMLGFDG------TIDSLIKPGV 530 Query: 498 ML 499 L Sbjct: 531 SL 532 >gi|269125233|ref|YP_003298603.1| methionyl-tRNA synthetase [Thermomonospora curvata DSM 43183] gi|268310191|gb|ACY96565.1| methionyl-tRNA synthetase [Thermomonospora curvata DSM 43183] Length = 599 Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 149/526 (28%), Positives = 235/526 (44%), Gaps = 64/526 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + + A Y N HIGH + D+ +R+ R+ G VL +GTDEHG I A Sbjct: 10 ILAAPAWPYANGPRHIGHVSGFALPCDMFSRYQRMAGNKVLMVSGTDEHGTPILVQADKE 69 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV + D+ SR L +SYD F RTT + H+ + ++K + D G I+ Sbjct: 70 GVGPREVADRYSRVIAGDLQALGMSYDLFTRTTTRNHYAVVQEIFKGLYDNGYIFPKTTL 129 Query: 126 GWYSLRDEAYYNDDEV--------YKGADG-QYYNA--QHNPV--------------QWM 160 G S D + Y GA G Q N Q +PV Q++ Sbjct: 130 GAISPSTGRTLPDRYIEGTCPICSYDGARGDQCDNCGNQLDPVDLINPRSRINGEKPQFV 189 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDWG 217 E E + L A+ D L Y S + R V+ F + L+DL ++SR DWG Sbjct: 190 ETEHFMLDLPAFTDALSDYLRSKQG-----QWRPNVLKFSLNLLEDLQPRAISRD-LDWG 243 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL---HVIGK 265 + +P D P +YVW DA+ Y + + +P+ +A + D + +GK Sbjct: 244 VPVPLEGWRDRPDKRLYVWFDAVVGYFSASVEWARRSGDPEAWRAWWQDPDALSYYFMGK 303 Query: 266 DILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FH+ WPA LL L LP +V + F+ +G K S S VI Sbjct: 304 DNIVFHSEIWPAMLLGYSGKGDKGGKPGSLGALNLPTEVVASEFLTMEGRKFSSSRQVVI 363 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 + +E VDALRY++ +D + ++R N +L GNLV+RS++M K Sbjct: 364 YVKDFLERYDVDALRYYVAVAGPETQDTDFTWQHFRERNNNELVAQWGNLVNRSLNMAAK 423 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 ++ G IP G T+ D ++L + + A+ + +V E + Y Q Sbjct: 424 EF-GAIPEAGELTDVDRALLERSRAAFDRVGAELGRSRFKNAVTEAFEVVREANGYLSTQ 482 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +PW+++ + R T+L+V ++V+ LL F+PK ++K+ +L Sbjct: 483 QPWKVE--DKARKGTILHVALQVVDDAKTLLTPFLPKSSDKVHKML 526 >gi|268317124|ref|YP_003290843.1| methionyl-tRNA synthetase [Rhodothermus marinus DSM 4252] gi|262334658|gb|ACY48455.1| methionyl-tRNA synthetase [Rhodothermus marinus DSM 4252] Length = 699 Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 131/516 (25%), Positives = 240/516 (46%), Gaps = 46/516 (8%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +++ ++ A+ Y N HIGH A + AD+ R+ RL G DVLF G+DE G I A Sbjct: 7 DRILVTAALPYANGPIHIGHLAGAYLPADLYCRYQRLKGRDVLFICGSDELGVAILMRAL 66 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG------ 117 G T + VD+ RD +S+D + RTT H +T + ++++ +KG Sbjct: 67 EEGTTPQAIVDRYHPMIRDSFARFGMSFDYYGRTTSPVHFETSQDFFRRLDEKGVFKLKT 126 Query: 118 -----DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------------Q 158 D G + +R E G + + +P + Sbjct: 127 EKQLYDPEAGIFLADRFVRGTCPICGYEDAYGDQCERCGSSLSPTDLINPRSVLSNATPE 186 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E ++ L +Q KL ++ +HPE+ + +V S+++ GL+D +++R WG+ Sbjct: 187 LRETTHWYLPLGDFQPKLEAWIATHPEWKPNV--LGQVRSWLQQGLRDRAVTRD-IPWGV 243 Query: 219 KIPDD---------PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD----LHV 262 +P+D ++YVW DA Y++ T G ++W + +H Sbjct: 244 PVPEDVARRHGVPAEGKVLYVWFDAPIGYISATREWAQQKGDPEAWRRYWQDERTRLIHF 303 Query: 263 IGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321 IGKD + FH + +PA L++ LP V ++ F+ +G K+S S G + E +EE Sbjct: 304 IGKDNIVFHCLMFPAMLMAHGEFVLPDNVPANEFLNLEGRKLSTSRGWAVWLHEYLEEFP 363 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D LRY L + +D + ++RVNA+LA+ +GN V R+++ + + +P Sbjct: 364 PDLLRYALATMLPETRDADFSWKEFQQRVNAELADILGNFVHRTLTFAQRFAERRVPPLR 423 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 DE +L + + I + A+ + ++L ++YF+ +PW +KT+P Sbjct: 424 NPRSVDEEVLRELATFPERIGSAYEQFRFREAVQETMNLARLGNKYFNDTEPWHTRKTDP 483 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + ++V++++ L IL++ +P A ++ ++L Sbjct: 484 QACANTIHVSLQICAALGILMEPVLPFAAARLREML 519 >gi|20092839|ref|NP_618914.1| methionyl-tRNA synthetase [Methanosarcina acetivorans C2A] gi|25009364|sp|Q8TIU5|SYM_METAC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|19918142|gb|AAM07394.1| methionyl-tRNA synthetase [Methanosarcina acetivorans C2A] Length = 712 Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 126/491 (25%), Positives = 225/491 (45%), Gaps = 39/491 (7%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N + HIGH + AD+ AR R +G +V F G+D HG I A+ G+T Sbjct: 15 VTCGLPYANGKAHIGHLRTYVPADIFARSLRKEGREVTFVCGSDTHGTPIVVNAEELGIT 74 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 K V+ ++F + L + +D F T + +H+ + ++ +K +Y Y Sbjct: 75 PKELVEIYHKHFDETFKQLGVYFDAFGTTDDPENHNRTLDIVNRLIEKDYVYPKIIEIAY 134 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQH---------------NPVQWMEEE 163 + D E +G + +H P ++ +E Sbjct: 135 CPACNRFLPDRYVEGACPHCGETARGDECDQGCGKHLEPGELQNPVCTICGGPAEYRHQE 194 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 +FF+LS + D L+ Y + + RN + +VK GL D ++R +WG++ P Sbjct: 195 HFFFKLSEFGDYLMDYLSN--DLGGTTNARNYALGWVKQGLTDWCITR-NLEWGVRFPGH 251 Query: 224 PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFL 279 ++YVW+DA Y+ T + S KFW + +H IG DI H I+WPA L Sbjct: 252 EDLVVYVWVDAPIGYIAFTEEWAAQAGDSWEKFWKGEGEIVHFIGGDITYHHCIFWPAML 311 Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIACGK 337 A+ +P V + G + + +K SK+ G V+ E + G D LRY+L + K Sbjct: 312 NGADYSVPTAVVASGMVKIEDKKFSKTRGYVVWVGEDYLDHGFHPDLLRYYLASYTSHTK 371 Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397 + + L++++NA+L +GN + R++ K+Y G +P E I Sbjct: 372 ELNFSWRVLQEKINAELVAVLGNFLYRTMLFAFKNY-GEVPEGKLEPEVSAEI----EEA 426 Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 L+E++E M +A+ ++L S + YF + +PW+L K + V+Y + + + Sbjct: 427 LKEVKEAMAEYEFKKAVDSAMALASFGNTYFQSHEPWKLIKEDRSACGQVIYNCLHLAKA 486 Query: 458 LAILLQAFVPK 468 L+++ + +P+ Sbjct: 487 LSLIFEPVLPQ 497 >gi|242238640|ref|YP_002986821.1| methionyl-tRNA synthetase [Dickeya dadantii Ech703] gi|242130697|gb|ACS84999.1| methionyl-tRNA synthetase [Dickeya dadantii Ech703] Length = 676 Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 132/503 (26%), Positives = 233/503 (46%), Gaps = 44/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ R+ R+ G V F D HG I AQ Sbjct: 7 KILVTCALPYANGPIHLGHMLEHIQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ + ++Q S+ + DIS+D++ T + + + ++++++ + G I S Sbjct: 67 GLAPEQMIEQVSQEHQRDFTGFDISFDNYHSTHSEENRELSGLIYRRLKENGFIKSRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160 + +++ + D KG A QY A ++P + + Sbjct: 127 QLFD-PEKSMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIDPKSAVSGATPVM 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + E +FF L A+ D L S+ S L + N++ + +GL+ +SR +G + Sbjct: 186 RDSEHFFFDLPAFSDMLQSWTRSG---ALQEQVANKMQEWFDAGLQQWDISRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHA 272 +PD P YVW+DA Y+ + L + G +FW D H IGKDI+ FH+ Sbjct: 243 VPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDIHFDEFWSKDSTADLYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P +F HG++ G K+SKS G I ++ + D LRY+ + Sbjct: 303 LFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAETYLKHLDADCLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 ++ D + + +RVNAD+ N + NL SR+ I K + G + A +D ++ Sbjct: 363 LSSRIDDIDLNLEDFIQRVNADIVNKVVNLASRNAGFINKRFAGKL----ADHIADPALY 418 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 Q I + ++ +A+ ++++L +RY D Q PW + K A ++ Sbjct: 419 QTFIEAAQTIADAYDSRESGKAVREIMALADLANRYVDEQAPWVVAKEEGRDAELQSICS 478 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P LA + Sbjct: 479 MGIHLFRVLMTYLKPVLPALAAR 501 >gi|54308361|ref|YP_129381.1| methionyl-tRNA synthetase [Photobacterium profundum SS9] gi|68565982|sp|Q6LSZ7|SYM_PHOPR RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|46912789|emb|CAG19579.1| putative methionyl-tRNA synthetase [Photobacterium profundum SS9] Length = 680 Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 138/505 (27%), Positives = 226/505 (44%), Gaps = 48/505 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E + AD+ R+ RL G +V F D HG I AQ Sbjct: 7 KILVTCALPYANGSIHLGHMLEHVQADIWVRYQRLRGNEVHFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ + +++ S+ + DIS+D++ T + + ++ ++ DKG I S Sbjct: 67 GMEPEQMIEEVSKEHQADFAGFDISFDNYHSTHSDENRELASFVYTQLKDKGYITNRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWM------------- 160 + E + D V KG A+ QY + N P + Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKAEDQYGDNCDNCGETYSPTDLIDPKSAVSGATPIM 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + E +FF L ++D L ++ +S L E N++ + +SGL +SR +G + Sbjct: 186 KDSEHFFFDLPQFEDMLKAWTKSG---ALQTETSNKMQEWFESGLHQWDISRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272 IP + YVW+DA Y+ + L + D +FW D H IGKDI+ FH+ Sbjct: 243 IPGETSKYFYVWLDAPIGYMGSFKNLCDKRDDLDFDEFWKKDSTTELYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L A P VF HG++ G K+SKS G I +E + + LRY+ + Sbjct: 303 LFWPAMLEGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLEHLDPECLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + D + + +RVN+D+ N I NL SR+ I K +DG + A E Sbjct: 363 LNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFITKRFDGKLSETFAEPELYAEFA 422 Query: 392 SVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTV 447 + R+ L E RE RA+ ++ +L + ++Y D + PW + K + Sbjct: 423 NAADRIAELYETRE------FSRAIREITALADKANQYIDEKAPWVVAKQEGKDQELQDI 476 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P L + Sbjct: 477 CSVGINLFRVLITYLKPVMPLLTER 501 >gi|229816972|ref|ZP_04447254.1| hypothetical protein BIFANG_02226 [Bifidobacterium angulatum DSM 20098] gi|229785717|gb|EEP21831.1| hypothetical protein BIFANG_02226 [Bifidobacterium angulatum DSM 20098] Length = 620 Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 154/553 (27%), Positives = 251/553 (45%), Gaps = 71/553 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A Sbjct: 4 ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ + ++ +R +D+ D L +SYD F RTT H + L+K+ + G IYKG Sbjct: 64 GVSAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEKVVQELFKQCLENGYIYKGTQ 122 Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158 S +L D Y GADG + NPV + Sbjct: 123 KVAISPSTGRTLPDR-YIEGTCPICGADGARGDQCDACGNELDPDELINPVSKINGETPR 181 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216 + E E +F L A + L++ ++ + R VI+F K++ T DW Sbjct: 182 FEETEHFFLDLPALAEANLAWLKTREGW------RTNVINFSIGLFKEVKPRAITRDIDW 235 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIG 264 GI +P D+P +YVW DA+ YL+ + G + W D + +G Sbjct: 236 GIPVPVKDWIDNPNKKLYVWFDAVIGYLSASIEWARRKGDSEAWRAWWNDPSTPGYYFMG 295 Query: 265 KDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNV 310 KD + FH+ WP+ +L+ N L +P++V + F+ +G+K S S G V Sbjct: 296 KDNITFHSQIWPSEMLAYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGIV 355 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 I +++ VDA+RY++ D + + N +LA+ GNLV+R ++I Sbjct: 356 IYVKDILSRYPVDAVRYYISIAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLIA 415 Query: 371 KDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428 K++ G IP T+ D ++L+ + ++N AL + + +V +++Y Sbjct: 416 KNF-GEIPAADENEMTDEDRALLAETNEAFATAGNFIENHRQKAALLEAMRIVGNINKYI 474 Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488 A +PW++K NP R TVL+V + + LL F+P + K+++ L Sbjct: 475 SATEPWKIKD-NPARLGTVLHVAAQAVSDANHLLAPFLPHASQKVWEALGGKGTFSPLPH 533 Query: 489 LDQRL---KPGFM 498 +++ KPGFM Sbjct: 534 IEEVEDLDKPGFM 546 >gi|227326675|ref|ZP_03830699.1| methionyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 676 Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 131/504 (25%), Positives = 228/504 (45%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E + AD+ R+ R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + S+ + +ISYD++ T + + + +++ ++ + G I Sbjct: 66 MGIAPEQMIAAMSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161 S Y ++ + D KG A QY A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAADQYGDNCEVCGATYSPTELIEPKSVVSGATPE 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L A+ + L ++ S L + N++ + SGL+ ++R +G Sbjct: 185 MRETEHFFFDLPAFSEMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271 +IPD P YVW+DA Y+ + L + G FW D H IGKDI+ FH Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDDFWKKDSDADLYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P +F HG++ G K+SKS G I ++ + D LRY+ Sbjct: 302 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K +DG + A +D + Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGKL----ADKLADAEL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVL 448 + I E ++ RA+ ++++L +RY D Q PW + K + + Sbjct: 418 YKTFTDAATSIAEAYSSRESGRAIREIMALADIANRYVDEQAPWVVAKAEGRDEDLQAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L+ + Sbjct: 478 SMGINLFRVLMTYLKPVLPSLSQR 501 >gi|326335395|ref|ZP_08201583.1| methionine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692460|gb|EGD34411.1| methionine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 690 Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 137/506 (27%), Positives = 238/506 (47%), Gaps = 39/506 (7%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I+ A+ Y N HIGH A + AD+ AR+ RL DV+F G+DEHG I+ A+ G Sbjct: 7 ITAALPYTNGPIHIGHLAGVYVPADIFARYQRLKNNDVVFICGSDEHGVAISIKAKKEGT 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + +D+ ++ +D IS+D++ RT+ H++T ++ + DKGD + Sbjct: 67 TPQKIIDKYNKIIKDSLFAFGISFDNYSRTSLPIHYETASKFFRTLYDKGDFIEETSEQL 126 Query: 128 YSLRDEAYYNDDEVY----KGADGQYYNAQH-------------NPVQWM--------EE 162 Y + + D V K + + Y Q NP + + Sbjct: 127 YDEQAGQFLADRFVIGTCPKCGNEEAYGDQCERCGTSLNATDLINPKSTLTGSKPVLRKT 186 Query: 163 EGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 + +F L Y D L + E H P +V S++ GL+ +++R DWGI +P Sbjct: 187 KHWFLPLQNYSDFLEKWIIEGHKNDWKP-NVYGQVKSWLDDGLRPRAVTRD-LDWGIPVP 244 Query: 222 DDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDILRFHAIY 274 D ++YVW DA Y+++T +G +W +H IGKD + FH I Sbjct: 245 IDGAEGKVLYVWFDAPIGYISSTKEWAAREGKDWTPYWKDKNTKLIHFIGKDNIVFHCII 304 Query: 275 WPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVR 331 +PA L + + LP+ V ++ F+ +G K+S S + E +EE D LRY + Sbjct: 305 FPAMLKAEGSYILPENVPANEFLNLEGSKLSTSKNWAVWLNEYLEEFPSQQDTLRYVITA 364 Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 KD + + R N +L GN ++R + + K Y ++PTP F++ D+ + Sbjct: 365 NAPETKDNDFTWKDFQARNNNELVAIYGNFINRVMVLTEKYYKNIVPTPHEFSKEDKEVF 424 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451 + Q I ++++ A +++++ ++Y ++PW+L K +P R T++YV Sbjct: 425 AQIKEFTQRIEQSLERYRFREAQQELMNIARLGNKYLADEEPWKLIKEDPKRVETIMYVA 484 Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477 + + LAI + F+P + K+ +L Sbjct: 485 LHIATALAITSEPFLPFTSEKLKQML 510 >gi|303256180|ref|ZP_07342196.1| methionine--tRNA ligase [Burkholderiales bacterium 1_1_47] gi|302860909|gb|EFL83984.1| methionine--tRNA ligase [Burkholderiales bacterium 1_1_47] Length = 700 Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 144/512 (28%), Positives = 237/512 (46%), Gaps = 50/512 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++++TA+ Y N H GH E I AD+ R R+ G V F D HG I +AQ G Sbjct: 6 IFLTTALPYANGNFHFGHIMEYIQADIWVRHQRMCGSTVHFVGADDAHGAPIMISAQKKG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT + +V + S D I +D + T K + + + ++K++ G IY Sbjct: 66 VTPQEYVAEISAGRAKYLDGFFIRFDHWHSTDSKENTELAQDIYKRLKKAGLIYSKEIEQ 125 Query: 127 WYSLRDEAYYNDDEVYK-----GADGQYYNAQH------------NP--------VQWME 161 +Y + + D + GA QY ++ NP ++ + Sbjct: 126 YYDPVRQMFLADRFIKGTCPKCGAPDQYGDSCEVCASVYRPTDLINPYSALSGSKLELRK 185 Query: 162 EEGYFFRLS-------AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + +FF+LS Q + + P I + L D +SR Sbjct: 186 SKHFFFKLSDPNCVEFLRQWTRSTAPDGTPRLQSQIVAKTAEWLGKDGDLSDWDISRDAP 245 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLD----NPDGSKAKFWPADLHVIGKDILR 269 +GI+IPD+P YVW+DA YL + Y + N + +H+IGKDI Sbjct: 246 YFGIEIPDEPGKFFYVWLDAPIGYLASLKAYCESKGINFEALLETSTTEQIHIIGKDIAY 305 Query: 270 FHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--L 325 FH ++WPA L + P +P V++HGF+ G+K+SKS G +DP+ V E+G+D L Sbjct: 306 FHTLFWPAMLHFSGKPFRVPDHVWAHGFVTVDGQKMSKSRGTGLDPL-VYLELGMDPEWL 364 Query: 326 RYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 RY+ ++ +D + R N+DL N+ SRS ++K ++G + P A Sbjct: 365 RYYFAYKLNSKVEDVDFSSADFISRTNSDLVGKYVNIASRSAGFLVKRFEGRVSDP-AIA 423 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 ES S+++ +I + +++ +AL V+ L ++V+ Y D ++PWEL K P+RA Sbjct: 424 ES--SLIAEIKAAAPDINASFEDREYGKALRAVMELANKVNEYVDQKQPWELAK-QPERA 480 Query: 445 S---TVLYVTVEVIRQLAILLQAFVPKLANKI 473 + V VT+E R L + L+ +P+ A + Sbjct: 481 AELHAVCSVTLEAFRLLTLFLKPVLPRTAENV 512 >gi|212712130|ref|ZP_03320258.1| hypothetical protein PROVALCAL_03212 [Providencia alcalifaciens DSM 30120] gi|212685177|gb|EEB44705.1| hypothetical protein PROVALCAL_03212 [Providencia alcalifaciens DSM 30120] Length = 675 Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 133/510 (26%), Positives = 234/510 (45%), Gaps = 44/510 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ R+ G +V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 +T + + ++ ++ ISYD++ T + + + +++ K+ + G I S Sbjct: 67 CITPEEMIAAMNQEHQNDFAGFQISYDNYHSTHSEENKELSELIYGKLKNNGFIKNKTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160 Y ++ + D KG A+ QY +A ++P + Sbjct: 127 QLYD-PEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPTDLINPRSVVSGATPVI 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E +FF L A+ D L ++ S L + N++ + +SGL+ ++R + +G + Sbjct: 186 RETEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDITRDSPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILRFHA 272 IPD P YVW+DA Y+ + L D + +FW D H IGKDI+ FH+ Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFKNLCDKRSDLNFDEFWNKDSKTDLYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L +N P +F HG++ G K+SKS G I ++ D LRY+ + Sbjct: 303 LFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFITARSYLDHFDADCLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 ++ D + + +RVN+D+ N + NL SR+ I K + G + A E + + Sbjct: 363 LSSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFIAKRFAGKLSANLAEPELYQQFV 422 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLY 449 + I ++ N+ +A+ ++++L +RY D + PW + K + Sbjct: 423 DAA----KVIGDDFTNREYGKAVREIMALADIANRYVDEKAPWVVAKQEGKDQELQDICS 478 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + + + R L L+ +P L ++ + L V Sbjct: 479 MGINLFRVLMTYLKPILPSLTKRVEEFLKV 508 >gi|251792930|ref|YP_003007656.1| methionyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700] gi|247534323|gb|ACS97569.1| methionyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700] Length = 686 Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 131/510 (25%), Positives = 236/510 (46%), Gaps = 54/510 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ ++ A+ Y N H+GH E I AD+ RF R+ G D+ F D HG I A Sbjct: 5 KRKILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNDIHFVCADDAHGTPIMLKAD 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+T + +D + MAD +IS+D++ T + + + ++ ++ + G I Sbjct: 65 QMGITPEQLIDDVRH--KHMADFAGFNISFDNYHSTHSEENREFSEFIYNRLKENGFIKS 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM--------- 160 S Y ++ + D KG + + A ++P + + Sbjct: 123 RTISQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCAATYSPTELINPHSVVSGA 181 Query: 161 -----EEEGYFFRLSAYQDKLLSYYES---HPEFILPIERRNEVISFVKSGLKDLSLSRK 212 + E +FF L +++ L ++ S PE + N++ + ++GL+ +SR Sbjct: 182 TPVMKDSEHFFFDLPSFEAMLKNWLGSGSLQPEVV------NKMQEWFEAGLQQWDISRD 235 Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGK 265 +G +IP+ YVW+DA Y+ + L + S FW D H IGK Sbjct: 236 APYFGFQIPNTEGKYFYVWLDAPIGYMASFKNLCKRESSIDFDSFWCKDSDVELYHFIGK 295 Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 DI+ FH+++WPA L A P +F HG++ GEK+SKS G I ++ + + L Sbjct: 296 DIMYFHSLFWPAMLEGAGFRKPSNIFVHGYVTVNGEKMSKSRGTFIQAATYLKHLDPECL 355 Query: 326 RYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 RY+ +++ D + + +RVN DL N + NL SR+ I K +DG + A Sbjct: 356 RYYYAAKLSNRIDDLDLNLEDFVQRVNTDLVNKLVNLASRNAGFIQKRFDGKL----AAA 411 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 D+++ + ++I +N+ +A+ ++++L + ++Y D + PW + K A Sbjct: 412 LDDQALFNEFIAQSEQIATYYENREFGKAIREIMALTDKANKYIDDKAPWVIVKEEGKDA 471 Query: 445 --STVLYVTVEVIRQLAILLQAFVPKLANK 472 V + +++ R L L+ +PKLA + Sbjct: 472 ELQAVCSMGIQLFRVLMGYLKPVLPKLAER 501 >gi|89902044|ref|YP_524515.1| methionyl-tRNA synthetase [Rhodoferax ferrireducens T118] gi|123091151|sp|Q21TB9|SYM_RHOFD RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|89346781|gb|ABD70984.1| methionyl-tRNA synthetase [Rhodoferax ferrireducens T118] Length = 700 Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 152/542 (28%), Positives = 240/542 (44%), Gaps = 61/542 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 +L+++TA+ Y N HIGH E I AD+ R+ R+ G V F D HG I AA+ Sbjct: 4 QLFVTTALPYANGNFHIGHIMEYIQADIWVRYQRMMGNAVHFVCADDCHGAPIMIAAEKV 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T + FV + + D I +D++ T +H+ + +++ + G I + Sbjct: 64 GKTPQQFVADIASGRKPYLDGFHIGFDNWHSTDGAENHELAQAIYRDLKAAGLISTRVIA 123 Query: 126 GWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQ--------------WM 160 ++ + D E K GA QY A ++P + Sbjct: 124 QFFDTEKNMFLPDRFIKGECPKCGAKDQYGDNCEECGAVYSPTELKNPYSALSGVTPVLR 183 Query: 161 EEEGYFFRLS-----AYQDKLLSYYESHPEFILPIERRNEVISFV------KSGLKDLSL 209 + E YFF+LS + ++ + + L E N++ ++ K L D + Sbjct: 184 DSEHYFFKLSDPRCVEFLEQWTTDTNPRGQSRLQAEVYNKIKEWLLPDAEGKRDLGDWDI 243 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYL-------------TTTGYLDNPDGSKAKFW 256 SR +GI+IPD P YVW+DA YL TTG + D A Sbjct: 244 SRDAPYFGIEIPDAPGKYFYVWLDAPIGYLAALKNRFIKLAGDATTG-AQHYDDFMADPA 302 Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316 H IGKDI+ FH ++WPA L + P VF HGF+ EK+SKS G +DP++ Sbjct: 303 TEQYHFIGKDIITFHTLFWPAMLHFSGRKTPNAVFVHGFLTVNSEKMSKSRGTGLDPLKY 362 Query: 317 IEEVGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 + +G++ LRY+L ++ A +D + + RVN+DL N+ SR+ I K + Sbjct: 363 L-SLGMNPEWLRYYLATKLTARNEDVEFSPEDFMARVNSDLVGKYINIASRAAGFIAKRF 421 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 G + G ++ ++L I + + + +AL + + L V+ Y DA KP Sbjct: 422 GGQL---GVISDDGAALLKQIQIERTSIEQLYEAREFAKALRETMLLADRVNEYVDANKP 478 Query: 434 WELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491 WEL K R V V +E R L L+ +P LA ++ +F+ E F S+ Q Sbjct: 479 WELAKQTGMETRLHDVCTVCIEAFRALTAYLKPVLPLLAAQV--EVFLNIEPLSFASVSQ 536 Query: 492 RL 493 L Sbjct: 537 TL 538 >gi|329942996|ref|ZP_08291770.1| methionyl-tRNA synthetase [Chlamydophila psittaci Cal10] gi|313848152|emb|CBY17153.1| methionyl-tRNA synthetase [Chlamydophila psittaci RD1] gi|328814543|gb|EGF84533.1| methionyl-tRNA synthetase [Chlamydophila psittaci Cal10] Length = 551 Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 148/510 (29%), Positives = 235/510 (46%), Gaps = 44/510 (8%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++A+ Y N H GH A + ADV ARF RL G DVL+ G+DE+G I A+ Sbjct: 4 RVLITSALPYANGPLHFGHIAGAYLPADVYARFRRLLGDDVLYICGSDEYGIAITLNAER 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG+ + +VD + +D D L IS D F RTT H D + +K++ KG I Sbjct: 64 AGMGYQEYVDMYHKIHKDTFDKLGISIDFFSRTTNPFHKDLVQDFYKELKSKGLIENQIS 123 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQH------NPVQWM------- 160 YS + + D V + GA G Q A + NP + Sbjct: 124 LQLYSEEENRFLADRYVEGTCPKCGFDGARGDECQKCGADYEATDLVNPRSKLSGSQLVL 183 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E F L D LL+Y ++ LP R V ++K+ L+ +++R WGI Sbjct: 184 KETEHAFLHLERMVDPLLAYIDT---CYLPEHVRKFVTDYIKN-LRPRAITRD-LSWGIP 238 Query: 220 IPDDPQYIMYVWIDALTNYLTTTG----YLDNPDGSKAKFWPAD----LHVIGKDILRFH 271 +PD P + YVW DA Y++ T L NPD K FW + + IGKD + FH Sbjct: 239 VPDFPNKVFYVWFDAPIGYISGTMDWAVSLSNPDAWK-DFWLEESTEYVQFIGKDNIPFH 297 Query: 272 AIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 A +PA L ++P K + S F L +G + SKS GN +D ++ +D LRY L Sbjct: 298 AAIFPAMELGQSIPYKKMDALVSSEFYLLEGYQFSKSEGNYVDIDSFLDTYSLDKLRYVL 357 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDE 388 D + K R N++L GN ++R ++ K+ + + + + D Sbjct: 358 AATAPETSDSEFTFIDFKTRCNSELVGKFGNFINRVLAFAEKNGFKELAYSTDLLEDQDR 417 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTV 447 L +++++ +E+ + +A ++ L + + YF+ Q PW+L K R + Sbjct: 418 KFLDHAQKIVRDAQEHYSKYSLRKACCAIMELAALGNVYFNDQAPWKLLKEGFTHRVEAI 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L+ + LA++ +P A +I+ +L Sbjct: 478 LFCACYCQKLLALISYPIIPGTAWEIWRML 507 >gi|307353949|ref|YP_003895000.1| methionyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571] gi|307157182|gb|ADN36562.1| methionyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571] Length = 669 Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 127/510 (24%), Positives = 233/510 (45%), Gaps = 40/510 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + + ++ + Y N HIGH + AD RF R G +V+F G+D HG + +++ Sbjct: 3 KSPVLVTCGLPYTNGPCHIGHLRTYVPADFYVRFLRHCGEEVVFICGSDNHGTPVVISSE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ + ++ +F + +++ +D F T + +H R + + + G IY+ Sbjct: 63 AEGISPREICERYHTHFYETFRKMEVIFDRFGMTDDPANHKRTRSIVTDLINNGYIYEKT 122 Query: 124 YSGWYSLRDEAYYND----------DEVYKGADGQYYNAQH-------NPV--------Q 158 S Y E + D E +G + +H +PV + Sbjct: 123 VSQCYCPHCEMFLPDRYVEGTCPHCGEKARGDECDQGCGKHLEPGEVLDPVCKICGEKAE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E++ +FF+L + D L + PE + RN + ++ GL D ++R T DWG+ Sbjct: 183 MREQDHFFFKLGDFNDFLKGFL---PELKGTLNARNYAMGWINEGLHDWCITR-TLDWGV 238 Query: 219 KIPDDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIY 274 K P ++YVW+DA Y+ T + + G+ +FW D H IG+DI+ H I+ Sbjct: 239 KFPGRDDLVVYVWVDAPIGYMAFTEEWAEKTGGNWEQFWKGDAPITHFIGQDIIYHHCIF 298 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVRE 332 WPA L + P + + G + SKS G V+ + ++G+ D LRY+L+ Sbjct: 299 WPALLKGSGYSTPYSIVASGMVKIDDRTFSKSRGYVVWTNDDYLDLGLSPDYLRYYLLSY 358 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 + K+ + + RVN +L + +GN + R+V K G IP GA DE IL Sbjct: 359 TSHTKELNFSWREFQARVNNELVDTLGNFIYRTVHFASKKLGG-IPDIGA----DEEILE 413 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + + ++ ++++L S + Y PW++ K + + A V+ + Sbjct: 414 EIKKRTALAESAAREYEFKSSIEEMMALASFGNTYIQTNAPWKMIKEDREGAEKVIRNCL 473 Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++++ LA+L + +P+ A I++ L D+ Sbjct: 474 QIVKALALLFDSVIPEKAQNIWEQLGYVDK 503 >gi|331001236|ref|ZP_08324862.1| methionine--tRNA ligase [Parasutterella excrementihominis YIT 11859] gi|329568963|gb|EGG50759.1| methionine--tRNA ligase [Parasutterella excrementihominis YIT 11859] Length = 700 Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 144/512 (28%), Positives = 236/512 (46%), Gaps = 50/512 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++++TA+ Y N H GH E I AD+ R R+ G V F D HG I +AQ G Sbjct: 6 IFLTTALPYANGNFHFGHIMEYIQADIWVRHQRMCGSTVHFVGADDAHGAPIMISAQKKG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT + +V + S D I +D + T K + + + ++K++ G IY Sbjct: 66 VTPQEYVAEISAGRAKYLDGFFIRFDHWHSTDSKENTELAQDIYKRLKKAGLIYSKEIEQ 125 Query: 127 WYSLRDEAYYNDDEVYK-----GADGQYYNAQH------------NP--------VQWME 161 +Y + + D + GA QY ++ NP ++ + Sbjct: 126 YYDPVRQMFLADRFIKGTCPKCGAPDQYGDSCEVCASVYRPTDLINPYSALSGSKLELRK 185 Query: 162 EEGYFFRLS-------AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + +FF+LS Q + + P I + L D +SR Sbjct: 186 SKHFFFKLSDPNCVEFLRQWTRSTAPDGTPRLQSQIVAKTAEWLGKDGDLSDWDISRDAP 245 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLD----NPDGSKAKFWPADLHVIGKDILR 269 +GI+IPD+P YVW+DA YL + Y + N + +H+IGKDI Sbjct: 246 YFGIEIPDEPGKFFYVWLDAPIGYLASLKAYCESKGINFEALLETSTTEQIHIIGKDIAY 305 Query: 270 FHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--L 325 FH ++WPA L + P +P V++HGF+ G+K+SKS G +DP+ V E+G+D L Sbjct: 306 FHTLFWPAMLHFSGKPFRVPDHVWAHGFVTVDGQKMSKSRGTGLDPL-VYLELGMDPEWL 364 Query: 326 RYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 RY+ ++ +D + R N+DL N+ SRS ++K ++G + P A Sbjct: 365 RYYFAYKLNSKVEDVDFSSADFISRTNSDLVGKYVNIASRSAGFLVKRFEGRVSDP-AIA 423 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 ES S+++ +I + + + +AL V+ L ++V+ Y D ++PWEL K P+RA Sbjct: 424 ES--SLIAEIKAAAPDINASFEGREYGKALRAVMELANKVNEYVDQKQPWELAK-QPERA 480 Query: 445 S---TVLYVTVEVIRQLAILLQAFVPKLANKI 473 + V VT+E R L + L+ +P+ A + Sbjct: 481 AELHAVCSVTLEAFRLLTLFLKPVLPRTAENV 512 >gi|291514795|emb|CBK64005.1| methionyl-tRNA synthetase [Alistipes shahii WAL 8301] Length = 680 Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 140/515 (27%), Positives = 246/515 (47%), Gaps = 42/515 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 KE ++ +++A+ Y N HIGH A I +D+ R+ RL G DV+ G+DEHG I Sbjct: 3 KEFKRYLVTSALPYANGPVHIGHLAGVYIPSDIYTRYLRLRGRDVISVCGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GVT + VD+ + + L +S+D + RT+ K H +T ++K+ D+G Sbjct: 63 KARKEGVTPQQIVDRYHALIKKSFEGLGMSFDIYSRTSSKTHAETASAFFRKLYDEGKFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEVY----KGADGQYYNAQ----------------HNPVQWM 160 + +Y + + D + K + + Y Q H+ V Sbjct: 123 EKTSMQYYDEEAQTFLADRYIVGTCPKCGNDRAYGDQCEKCGSTLSPDELIDPHSAVSGS 182 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + ++ L Y++ L + + H E+ + + S++ GL+ ++SR Sbjct: 183 VPVKRETKHWYLPLDRYEEFLREWILDGHKEWKTNV--YGQCKSWLDGGLQPRAVSRD-L 239 Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDIL 268 DWGI +P + ++YVW DA Y++ T L PD + +W ++ +H IGKD + Sbjct: 240 DWGIPVPVEGAEGKVLYVWFDAPIGYISATKDL-TPDWER--YWKSEDTKMVHFIGKDNI 296 Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDAL 325 FH I +P+ L + + LP+ V ++ F+ +G+KIS S + E +EE D L Sbjct: 297 VFHCIVFPSMLKAHGDYILPENVPANEFLNLEGDKISTSRNWAVWLHEYLEEFPGKEDVL 356 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 RY L KD + + R N +L +GN V+R++ + K Y G +P G T+ Sbjct: 357 RYVLCANAPETKDNDFTWKDFQARNNNELVAVLGNFVNRALVLTQKYYGGKVPACGELTD 416 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 D ++ + V + N++N AL +++ ++Y +PW++ KT+ R Sbjct: 417 YDRQSIAEVAAVKASLEGNIENYRFREALKDAMNIARIGNKYLADTEPWKVVKTDSARVE 476 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 T+L + +++ AI ++ F+P A KI +L V Sbjct: 477 TILNIALQITANTAIAIEPFMPFSAEKILRMLAVG 511 >gi|257465312|ref|ZP_05629683.1| methionyl-tRNA synthetase [Actinobacillus minor 202] gi|257450972|gb|EEV25015.1| methionyl-tRNA synthetase [Actinobacillus minor 202] Length = 687 Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 132/510 (25%), Positives = 236/510 (46%), Gaps = 49/510 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M K+ ++ A+ Y N H+GH E I AD+ RF R+ G +V F D HG I Sbjct: 1 MSNTRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGHEVHFVCADDAHGTPIML 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A G+T + +++ + +IS+D++ T + + + ++KK+ + G I Sbjct: 61 NAAKQGITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENRELTTAMYKKLKENGFIK 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM-------- 160 S + + + D V KG A+ QY + + ++P+ + Sbjct: 121 SRVISQLFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSVVSG 179 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E E +FF L A+++ L ++ S L E N++ + +SGL+ +SR Sbjct: 180 ATPIVKESEHFFFDLPAFEEMLKAWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG-SKAKFWPAD-----LHVIGKDIL 268 +G IPD YVW+DA Y+ + L + G FW D H IGKDI+ Sbjct: 237 YFGFPIPDSENKFFYVWLDAPIGYMASFKNLCDRTGLDYQSFWQKDSTAELYHFIGKDIV 296 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH+++WPA L P +F+HG++ G K+SKS G I ++ + + LRY+ Sbjct: 297 YFHSLFWPAMLEGCEQRKPTNIFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYY 356 Query: 329 LVREIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 ++ + D D +RVN+D+ N + NL SR+ I K ++G + T + Sbjct: 357 YAAKL---NERIEDLDLSLTDFIQRVNSDIVNKLVNLASRNAGFIAKRFEGKLAT----S 409 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 D+++ + ++I + + + ++A+ ++ L + ++Y D + PW + K A Sbjct: 410 LDDQALFAEFVAQSEQIAAHYEAREFNKAIRVIMDLCDKANKYIDDKAPWVIAKEEGKEA 469 Query: 445 --STVLYVTVEVIRQLAILLQAFVPKLANK 472 V + +E+ R L L+ +P+LA + Sbjct: 470 ELQAVCSMGIELFRILMSYLKPVLPQLAER 499 >gi|170717858|ref|YP_001784916.1| methionyl-tRNA synthetase [Haemophilus somnus 2336] gi|189083261|sp|B0UV72|SYM_HAES2 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|168825987|gb|ACA31358.1| methionyl-tRNA synthetase [Haemophilus somnus 2336] Length = 683 Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 147/547 (26%), Positives = 250/547 (45%), Gaps = 61/547 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I A Sbjct: 7 QILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLKADQM 66 Query: 66 GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV ++ D ++ D + +IS+D++ T + + ++ K++ G I Sbjct: 67 GVKPEQLIADVQQKHMADF-NGFNISFDNYHSTHSDENRELVEAIYHKLTQNGFIKTRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160 S + ++A + D KG A+ QY +A ++P++ + Sbjct: 126 SQLFD-PEKAMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPIELISPRSTVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A+ L + S L E N++ + ++GL+ +SR +G Sbjct: 185 LKESEHFFFDLPAFGAMLTEWIRSGS---LQQEVANKMQEWFEAGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV-----IGKDIL 268 KIP+ YVW+DA Y+ + N G K+ FW + H IGKDI+ Sbjct: 242 KIPNTDNKYFYVWLDAPIGYMAS---FKNLCGKKSGIDFDSFWSKESHAELYHFIGKDIM 298 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH+++WPA L A+L P +F HG++ GEK+SKS G I ++ + + LRY+ Sbjct: 299 YFHSLFWPAMLDGASLRKPNNIFVHGYVTVNGEKMSKSRGTFIQAATYLKYLDPECLRYY 358 Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ D + D +RVN DL N + NL SR+ S I K +DG + A D Sbjct: 359 YAAKLGSRIDDLDLNLDDFVQRVNTDLVNKLVNLASRNASFIQKRFDGKL----ANKLDD 414 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445 + + + I + +N+ +A+ ++++L + ++Y D + PW + K + D Sbjct: 415 KMLFDEFIAQSELIADYYENREFGKAIREIMALTDKANKYVDEKAPWVIAKDESRTDELQ 474 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLDQRLKPGFMLHKTF 503 V + +E+ R L L+ +P LA + L + EN LD ++ P F Sbjct: 475 QVCSMGIELFRVLIGYLKPVLPNLAARAEAFLNTQLTWENVASPLLDHQIAP-------F 527 Query: 504 DPIFPRF 510 P+F R Sbjct: 528 KPLFSRL 534 >gi|330966553|gb|EGH66813.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 682 Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 140/546 (25%), Positives = 238/546 (43%), Gaps = 49/546 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +D + + D AD L + +D+F T + + +++ ++ D G I Sbjct: 61 RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164 + ++ + + D + G + + A + P + + Sbjct: 120 ATRSVTQYFDPEKKMFLADRFIKGTCPKCAAVDQYGDNCEKCGATYAPTDLKDPKSAISG 179 Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 +FF L A+ L S+ S L N++ ++ SGL+ +SR Sbjct: 180 ATPVLKDSKHFFFDLPAFNTMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKDI 267 +G +IPD+P YVW+DA Y+ + L PD +W D H IGKDI Sbjct: 237 YFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L A+L P V HG++ G+K+SKS G I ++ + + LRY Sbjct: 297 VNFHALFWPAMLEGADLRKPTGVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRY 356 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 357 YYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPEL 416 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRA 444 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 417 TDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEV 472 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFMLH 500 + V + RQL I L+ +P LA L VA D+++ + Q L P L Sbjct: 473 QAACALGVNLFRQLVIFLKPVLPNLAADAEKFLNVAPLTWDDHKTLLTHHQ-LNPFSALM 531 Query: 501 KTFDPI 506 DP+ Sbjct: 532 TRIDPL 537 >gi|262373343|ref|ZP_06066622.1| methionyl-tRNA synthetase [Acinetobacter junii SH205] gi|262313368|gb|EEY94453.1| methionyl-tRNA synthetase [Acinetobacter junii SH205] Length = 685 Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 149/543 (27%), Positives = 243/543 (44%), Gaps = 63/543 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I AD+ R R G DV + D HG I A+ Sbjct: 3 KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62 Query: 66 GVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + + + RD D + +D + T + ++ K + G+I Sbjct: 63 GISPEAQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARASEIYIKNREAGNIAVRPV 121 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161 + + ++ + D KG A+ QY YNA NP + Sbjct: 122 TQLFD-PEKGMFLSDRFIKGTCPKCKAEDQYGDSCEVCGTTYNATELLNPRSTLSGATPV 180 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + YFF+L + + L + LP+ N++ + +SGL D +SR +G Sbjct: 181 EKSSDHYFFKLPNFSEYLQKWTRDQGR--LPLSIANKLDEWFESGLSDWDISRDAPYFGF 238 Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLD--NPDGSKAKFWPAD-----LHVIGKDILRF 270 +IPD P YVW+DA Y+++ Y+ PD S FW D H IGKDI+ F Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPDLSFDDFWKKDSDKEVYHFIGKDIVYF 298 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 HA++WPA L AN P +F +GF+ G+K+SKS G I ++ + + LRY+ Sbjct: 299 HALFWPAMLEGANYRTPSGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ +D + D ++VN+DL + N+ SR I +++ + + A E +S Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSNFNNTLSSTCAEPELVQS 418 Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRAS 445 + + Q E RE A+ ++++L + ++Y D +KPW L K + Sbjct: 419 FIDAGDSIAQAYEARE------FSAAIREIMALADKANQYIDEKKPWALAKQEGQEQQVH 472 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI--------FDI-----LFVADENRCFQSLDQR 492 V V + + RQLAI L +P LA ++ FD + VA E FQ L QR Sbjct: 473 DVCSVGINLFRQLAIYLAPVLPTLAAQVQSFLQLESFDFASRQQILVAHEIAQFQPLMQR 532 Query: 493 LKP 495 + P Sbjct: 533 VDP 535 >gi|271499792|ref|YP_003332817.1| methionyl-tRNA synthetase [Dickeya dadantii Ech586] gi|270343347|gb|ACZ76112.1| methionyl-tRNA synthetase [Dickeya dadantii Ech586] Length = 676 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 131/503 (26%), Positives = 229/503 (45%), Gaps = 44/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ R+ R+ G V F D HG I AQ Sbjct: 7 KILVTCALPYANGPIHLGHMLEHIQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV + + S+ + +ISYD++ T + + + ++++++ + G I S Sbjct: 67 GVAPEQMIATVSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYRRLKENGFIKNRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160 + +++ + D KG A QY A ++P + + Sbjct: 127 QLFD-PEKSMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIDPKSAVSGATPVM 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E +FF L A+ D L + S L + N++ + +GL+ ++R +G + Sbjct: 186 RESEHFFFDLPAFSDMLQGWTRSG---ALQEQVANKMQEWFDAGLQQWDITRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADL-----HVIGKDILRFHA 272 +PD P YVW+DA Y+ + L + G +FW D H IGKDI+ FH+ Sbjct: 243 VPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDEFWRKDASTELYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P +F HG++ G K+SKS G I + + D LRY+ + Sbjct: 303 LFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKADTYLRHLDADCLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 ++ D + + +RVNAD+ N + NL SR+ I K +DG + A + +D ++ Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGQL----ADSLADPALY 418 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 I E ++ +A+ ++++L +RY D Q PW + K A + Sbjct: 419 QTFIDAAHTIAEAYSSRESGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICS 478 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L+ + Sbjct: 479 MGINLFRVLMTYLKPVLPSLSER 501 >gi|119026553|ref|YP_910398.1| methionyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703] gi|187646707|sp|A1A3N3|SYM_BIFAA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|118766137|dbj|BAF40316.1| methionyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703] Length = 620 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 149/530 (28%), Positives = 248/530 (46%), Gaps = 70/530 (13%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A Sbjct: 4 ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ + ++ +R +D+ D L +SYD F RTT H + L+K+ + G IYKG Sbjct: 64 GVSAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEKVVQELFKQCLENGYIYKGTQ 122 Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158 S +L D Y GADG + NPV + Sbjct: 123 KVAISPSTGRTLPDR-YIEGTCPICGADGARGDQCDACGNELDPDELLNPVSKINGETPR 181 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216 + E E +F L A + L++ ++ + R VI+F K++ T DW Sbjct: 182 FEETEHFFLDLPALAEANLAWLKTREGW------RTNVINFSIGLFKEVKPRAITRDIDW 235 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVI 263 GI +P D+P +YVW DA+ YL+ + +P+ +A +W + + Sbjct: 236 GIPVPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRKGDPEAWRA-WWNDPTTPGYYFM 294 Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WP+ +L+ N L +P++V + F+ +G+K S S G Sbjct: 295 GKDNITFHSQIWPSEMLAYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGI 354 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI +++ VDA+RY++ D + + N +LA GNLV+R ++I Sbjct: 355 VIYVKDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLI 414 Query: 370 LKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 K++ G IP + T+ D ++L+ + + ++N AL++ + +V ++++Y Sbjct: 415 NKNF-GEIPAFDEASATDEDRALLAETKAAFETVGGLIENHRQKNALSEAMRVVGDINKY 473 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A +PW++K NP R TVL+ + + LL F+P A K+++ L Sbjct: 474 ISATEPWKIKD-NPARLGTVLHTAAQAVSDANHLLAPFLPHSAQKVWEAL 522 >gi|315633887|ref|ZP_07889176.1| methionyl-tRNA synthetase [Aggregatibacter segnis ATCC 33393] gi|315477137|gb|EFU67880.1| methionyl-tRNA synthetase [Aggregatibacter segnis ATCC 33393] Length = 686 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 131/507 (25%), Positives = 235/507 (46%), Gaps = 48/507 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I A Sbjct: 5 KRKILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLKAD 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+T + +D + MAD +IS+D++ T + + + ++ ++ + G I Sbjct: 65 QMGITPEQLIDDVRH--KHMADFAGFNISFDNYHSTHSEENREFSEFIYNRLKENGFIKS 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM--------- 160 S Y ++ + D KG + + A ++P + + Sbjct: 123 RTISQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCAATYSPTELINPRSVVSGA 181 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 + E +FF L +++ L ++ S L E N++ + ++GL+ +SR Sbjct: 182 TPVMKDSEHFFFDLPSFEAMLKNWLGSGS---LQSEVVNKMQEWFEAGLQQWDISRDAPY 238 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDIL 268 +G +IP+ YVW+DA Y+ + L + S FW D H IGKDI+ Sbjct: 239 FGFQIPNAEGKYFYVWLDAPIGYMASFKNLCKRETSIDFDSFWCKDSDAELYHFIGKDIM 298 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH+++WPA L A P +F HG++ GEK+SKS G I ++ + + LRY+ Sbjct: 299 YFHSLFWPAMLEGAGFRKPSNIFVHGYVTVNGEKMSKSRGTFIQAATYLKHLDPECLRYY 358 Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 +++ D + + +RVN DL N + NL SR+ I K +DG + A D Sbjct: 359 YAAKLSNRIDDLDLNLEDFVQRVNTDLVNKLVNLASRNAGFIQKRFDGKL----AAALDD 414 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--S 445 +++ S ++I +N+ +A+ ++++L + ++Y D + PW + K A Sbjct: 415 QALFSEFIAQSEQIATYYENREFGKAIREIMALTDKANKYIDDKAPWVIAKEEGKDAELQ 474 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472 V + +++ R L L+ +PKLA + Sbjct: 475 AVCSMGIQLFRVLMGYLKPVLPKLAER 501 >gi|221134806|ref|ZP_03561109.1| methionyl-tRNA synthetase [Glaciecola sp. HTCC2999] Length = 685 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 135/508 (26%), Positives = 233/508 (45%), Gaps = 55/508 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I ++ RF ++ G D HG + AQ Sbjct: 7 KILVTSALPYANGSIHLGHLLEHIQTNIWTRFQKMRGHTCFSVCADDAHGTPVMLKAQEL 66 Query: 66 GVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + V + + + +D+ D DI YD++ T + ++ +++ G I K Sbjct: 67 GITPEEMVTRTRAEHHQDLLD-FDIDYDNYYVTHSDENKLLSETIYNRLNAAGYISKKTI 125 Query: 125 SGWYSLRDEAYYND-----DEVYKGADGQYYN------AQHNPVQ--------------W 159 + Y + D D GA+ Q + A ++P + Sbjct: 126 NQLYDPEKGMFLPDRFVKGDCPKCGAEDQNGDSCDVCAATYSPTELKNPRSVVSGATPVL 185 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + E YFF L ++ L + +S + E N++ + + GL+ +SR +G + Sbjct: 186 KDSEHYFFDLPKFEGMLKDWIQSG---AIQSEMANKLQEWFEQGLQQWDISRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRFH 271 IP+ P YVW+DA Y+ + +++ G+ F W AD H IGKDI+ FH Sbjct: 243 IPNAPGKYFYVWVDAPVGYMAS--FMNFCAGNNINFDEYWSADSDAELYHFIGKDIMYFH 300 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 ++WPA L AN P V HGF+ G K+SKS G I +E + + LRY+ Sbjct: 301 CLFWPAMLEGANYRKPTGVNIHGFVTVNGAKMSKSKGTFIKARTYLEHLNPEYLRYYFAS 360 Query: 332 EIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ D D D ++VN+DL + N+ SR S I K +DG + T D Sbjct: 361 KL---NDSVTDIDLNFEDFTQKVNSDLVGKVVNIASRCASFITKKFDGKLSQ----TILD 413 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR---A 444 E++L+ + + I + +N+ H A+ ++++L + +++ D Q PW K +PD+ Sbjct: 414 EALLNEFTHASESIATHFENRQYHHAIREIMALADKANQFIDTQAPWVTIK-DPDQQQLT 472 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANK 472 V + + + R L+I L +P L+ K Sbjct: 473 HDVCSMGIHMFRVLSIYLSPVLPDLSQK 500 >gi|88706623|ref|ZP_01104326.1| Methionyl-tRNA synthetase [Congregibacter litoralis KT71] gi|88699119|gb|EAQ96235.1| Methionyl-tRNA synthetase [Congregibacter litoralis KT71] Length = 714 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 134/546 (24%), Positives = 243/546 (44%), Gaps = 54/546 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + + ++ +++A+ Y N H+GH E + D+ RF R G + + D HG I + Sbjct: 26 QAKRRILVTSALPYANGPLHLGHILEQVQTDIWVRFQRSRGHECHYVCADDAHGTAIMLS 85 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G+T + +D ++ + IS+D+F T + +++++ G I + Sbjct: 86 AERQGITAEQQIDAVHKDHLAASRAFAISFDNFYSTHSEETRHWSETIYERLKAAGAINE 145 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM--------- 160 + Y ++ + D KG + + A ++P + + Sbjct: 146 REITQAYD-PEKGLFLADRFIKGTCPRCKTPDQYGDNCEACGATYSPAELIDPLSALSGA 204 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 E +FFRL + D L ++ +S L N++ + SGL++ +SR Sbjct: 205 TPVDRESRHFFFRLPLFADMLRTWIDSG---TLQDAVANKLREWTDSGLQEWDISRDAPY 261 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILR 269 +G +IP + YVW+DA Y+ + Y D + FW H +GKDI+ Sbjct: 262 FGFQIPGETDKYFYVWLDAPIGYMGSFQNYCAQRDIAFDDFWQPGGDTELYHFVGKDIIN 321 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH ++WPA L +A L P VF HGF+ G K+SKS G I+ ++ + + LRY+ Sbjct: 322 FHGLFWPAMLHAAELRTPTGVFVHGFLTVDGTKMSKSRGTFINAHHYLQHLDAEYLRYYF 381 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ G D + + +RVN+D+ + N+ SR + K ++ S+ Sbjct: 382 AAKLSAGVDDIDLNLEDFVQRVNSDVVGKVVNIASRCAGFLRKGFENRTSE----RCSEP 437 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 +L+ EI + +++ +A+ ++ L ++Y D KPW + K P +A+ V Sbjct: 438 ELLASFGEAGTEIAQAYEDREFSKAIRLIMELADRANQYIDQHKPWVMAK-EPGQAADVQ 496 Query: 449 YVT---VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--TF 503 V + R L I LQ +P +A + L RC DQR + + H+ TF Sbjct: 497 LVCSTGINCFRLLMIYLQPVLPTMAERAAAYL------RCSLDWDQR-EALLLNHELATF 549 Query: 504 DPIFPR 509 +P+ R Sbjct: 550 EPLMQR 555 >gi|126667556|ref|ZP_01738526.1| Methionyl-tRNA synthetase [Marinobacter sp. ELB17] gi|126627982|gb|EAZ98609.1| Methionyl-tRNA synthetase [Marinobacter sp. ELB17] Length = 679 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 131/506 (25%), Positives = 233/506 (46%), Gaps = 46/506 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K++ + +++A+ Y N H+GH E I D+ AR+ +L G + D HG I Sbjct: 7 KQKRDILVTSALPYANGPIHLGHLLEYIQTDIWARYQKLRGHTCYYVCADDAHGTAIMLR 66 Query: 62 AQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + +D+ + +D D L I +D++ T + +++++ G I Sbjct: 67 AEREGITPEQLIDRIRQEHQQDFGDFL-IRFDNYYTTHSDENRQFSEFIYRQLQQSGHIA 125 Query: 121 KGCYSGWYSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWM-------- 160 + + + D D+ Y G + + A ++P + + Sbjct: 126 TRTITQSFDPEKNMFLADRFIKGTCPKCKTDDQY-GDNCEVCGATYSPTELINPRSAVSG 184 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E E +FF+L + D L + S L + N++ ++ +GL D +SR Sbjct: 185 ATPIEKESEHFFFKLPDFADFLAKWTRSG---TLQPQVANKLAEWLDAGLHDWDISRDAP 241 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD-----LHVIGKDIL 268 +G ++PD P YVW+DA YL + L +G + FW AD H IGKDI+ Sbjct: 242 YFGFEVPDAPGKYFYVWLDAPIGYLASFKNLCVREGINFEHFWKADSTAEVYHFIGKDII 301 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FHA++WPA L P V++HGF+ G+K+SKS G I ++ + + LRY+ Sbjct: 302 NFHALFWPAILHDTGFRTPTAVWAHGFVTVNGKKMSKSRGTFIMARTYLDFLNPEYLRYY 361 Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ G D + D RVN+DL + N+ SRS I K +DG + G TE + Sbjct: 362 FAAKLTGGVDDMDLNLDDFAARVNSDLVGKVVNIASRSAGFISKRFDGKL---GQVTEIN 418 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL--KKTNPDRAS 445 + L+ +E+ +N+ RA+ +++ L ++Y + ++PW + +K ++ Sbjct: 419 K--LNEFIDAGEELAGYYENREFGRAMRRIMELADIANQYVNDEQPWVVAKQKGEDEKLQ 476 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLAN 471 + + + R L L +PK A+ Sbjct: 477 AICTNALNMFRLLMTYLAPVLPKTAD 502 >gi|312131388|ref|YP_003998728.1| methionyl-tRNA synthetase [Leadbetterella byssophila DSM 17132] gi|311907934|gb|ADQ18375.1| methionyl-tRNA synthetase [Leadbetterella byssophila DSM 17132] Length = 681 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 138/511 (27%), Positives = 245/511 (47%), Gaps = 41/511 (8%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 ++ A+ Y N HIGH A I ADV R+ R G DV F +GTDEHG I A+ GV Sbjct: 5 VTAALIYANGPIHIGHLAGCYIPADVFVRYLRSKGEDVAFISGTDEHGVPITIKAKKEGV 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + VD+ + +D + IS+D + RTT HH T + ++K+ DKG + + Sbjct: 65 SPQEVVDKYYKIIKDSFEDFGISFDIYSRTTSPVHHQTSQEFFRKMYDKGFFDEIETEQY 124 Query: 128 YSLRDEAYYNDDEVY--------KGADG---QYYNAQHNPVQWME--------------E 162 + + + D + GA G + + +P ++ Sbjct: 125 FDETAQQFLADRYIVGECPVCHSPGAYGDQCEKCGSSLSPTDLIQPKSTISGSAPVMKAT 184 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222 + ++ L Q ++ Y SH E+ + + S++K GL+ +++R DWG+K+P Sbjct: 185 KNWYLPLDKMQPEIEKYVNSHTEWKTNV--FGQCQSWLKQGLQPRAMTRD-LDWGVKVPV 241 Query: 223 DPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYW 275 + ++YVW DA Y++ T G + + D ++ IGKD + FH I + Sbjct: 242 EGADGKVLYVWFDAPIGYISMTKEWAEKTGKNWEDYWRDKDTKLINFIGKDNIVFHCIIF 301 Query: 276 PAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLVRE 332 PA ++ + L V ++ F+ + +KIS S + E ++E D LRY L Sbjct: 302 PAMCMAEGSYILADNVPANEFMNLENDKISTSRNWAVWLHEYLQEFPGKQDVLRYVLTAN 361 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 KD + + + N++L GN V+R++ + K ++G +PTPG F E D L Sbjct: 362 APETKDNDFTWKDFQTKNNSELVGIYGNFVNRTIVLTKKYFEGKVPTPGTFEEIDTQTLE 421 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 ++ ++I +++Q+ ALA ++ + ++Y +PW++K +P+R T+L+V Sbjct: 422 ALKKLPEQIGDSVQHYRFREALAGMMEVARLGNKYLADTEPWKVK--DPERVKTILFVAH 479 Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADEN 483 ++ LAI+ + F+P + KI D + + N Sbjct: 480 QITGTLAIVSEPFLPFTSRKIMDQMSAKEWN 510 >gi|311694183|gb|ADP97056.1| methionyl-tRNA synthetase [marine bacterium HP15] Length = 676 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 126/500 (25%), Positives = 226/500 (45%), Gaps = 41/500 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K++ + +++A+ Y N H+GH E I D+ R+ ++ G + + D HG I Sbjct: 6 KQQRDILVTSALPYANGPIHLGHLLEYIQTDIWVRYQKMRGQNCYYVCADDAHGTAIMLR 65 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G+T++ +D+ ++ I +D++ T + + +++++ + G I Sbjct: 66 AEREGITSEQLIDRIREEHQEDFAGFHILFDNYYTTHSEENRYFSEYIYRQLQENGHIAT 125 Query: 122 GCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM---------- 160 + Y + D E G + + A + P + + Sbjct: 126 RKITQSYDPEKNMFLADRFIKGTCPKCKTEDQYGDNCEACGATYTPAELINPRSAVSGAT 185 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 E E YFF+L +QD L + S L + N++ ++ +GL++ +SR + Sbjct: 186 PIEKESEHYFFKLPDFQDFLAKWTRSG---TLQPQVANKLAEWLDAGLQEWDISRDAPYF 242 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRF 270 G +IPD P YVW+DA YL + L N +G FW AD H IGKDI+ F Sbjct: 243 GFEIPDAPGKYFYVWLDAPIGYLASFKNLCNREGIDFEHFWKADSTAEVYHFIGKDIINF 302 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 HA++WP+ L A P V++HGF+ G+K+SKS G I ++ + + LRY+ Sbjct: 303 HALFWPSMLHDAGFRTPTAVWAHGFVTVNGKKMSKSRGTFIMARTYLDHLNPEYLRYYFA 362 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 ++ D + + RVN+DL + N+ SRS I K +DG + G TE + Sbjct: 363 AKLTGSVDDMDLNLEDFAARVNSDLVGKVVNIASRSAGFITKRFDGQL---GQVTE--HA 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 L +EI E +++ RA+ +++ L ++Y + ++PW + K + + Sbjct: 418 KLKEFIEAGKEIEEYYESREFGRAMRRIMELADIANQYVNDEQPWVIAKQE-GQDENLQA 476 Query: 450 VTVEVIRQLAILLQAFVPKL 469 + I +L+ P L Sbjct: 477 ICTNAINMFHLLMTYLAPVL 496 >gi|227487803|ref|ZP_03918119.1| methionyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867] gi|227542444|ref|ZP_03972493.1| methionyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866] gi|227092305|gb|EEI27617.1| methionyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867] gi|227181642|gb|EEI62614.1| methionyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866] Length = 608 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 152/531 (28%), Positives = 246/531 (46%), Gaps = 69/531 (12%) Query: 6 KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + ++ A Y N HIGH + +DV AR+ R+ G +VL +GTDEHG + A Sbjct: 3 NVLVNVAWPYANGPRHIGHVAGFGVPSDVFARYQRMRGENVLMVSGTDEHGTPLLVQADK 62 Query: 65 AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + + N + D+A L ++YD F RTT + H+ + L+ + G + K Sbjct: 63 EGTTVQELATRYNEQIVHDLAG-LGLTYDLFTRTTTRNHYAVVQELFDGLYKNGYLIKQT 121 Query: 124 YSGWYSLRD-----EAYYNDDEVYKGADG----QYYNA--QHNPV--------------Q 158 G S + Y GA G Q N Q +PV + Sbjct: 122 TKGAISPSTGRTLPDRYIEGTCPICGASGARGDQCDNCGNQLDPVDLIDPVSKINGETPK 181 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFD 215 ++E E + L A D L + + ++ R V+ F + L+D+ ++SR D Sbjct: 182 FVETEHFMLDLPAVADALAEWLKGREDW------RPNVLKFSLNLLEDIRPRAISRD-ID 234 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262 WG+ IP DD +YVW DA+ YL+ + NP+ + FW + Sbjct: 235 WGVPIPVEGWQDDHAKKLYVWFDAVVGYLSASIEWAHRSGNPEAWR-DFWNDPETRSYYF 293 Query: 263 IGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLG 308 +GKD + FH+ WP+ LL L LP +V S ++ G K S S G Sbjct: 294 MGKDNITFHSQIWPSMLLGYAGKGAHGGEVYELGELNLPTEVVSSEYLTMSGSKFSSSKG 353 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 VI + +EE G D LRYF+ D + + +RVN +LAN GNLV+R+VSM Sbjct: 354 IVIYVKDFLEEFGPDPLRYFISVAGPETNDTDFTWEEFVRRVNNELANSWGNLVNRTVSM 413 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428 K++ G +P PG T++D ++LS+ + +++ N + + + +V E + Y Sbjct: 414 AYKNF-GEVPQPGELTDADRALLSLAEEAFDIVGDHLNNSRFKQGINHAMHVVGEANAYI 472 Query: 429 DAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +PW+L K + +R +TVL+V ++V+ LL ++P +A ++ + L Sbjct: 473 AEMEPWKLAKDESQRERLATVLWVALQVVSDCNTLLTPYLPHIAQQVHETL 523 >gi|268590249|ref|ZP_06124470.1| methionine--tRNA ligase [Providencia rettgeri DSM 1131] gi|291314533|gb|EFE54986.1| methionine--tRNA ligase [Providencia rettgeri DSM 1131] Length = 675 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 133/503 (26%), Positives = 234/503 (46%), Gaps = 44/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ R+ G +V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT + + ++ ++ ISYD++ T + + +++ K+ + G I S Sbjct: 67 GVTPEEMIAAVNQEHQNDFAGFAISYDNYHSTHSEENKVLSELIYGKLKNNGFIKNRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160 + ++ + D KG A+ QY +A ++P + + Sbjct: 127 QLFD-PEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPTELINPRSVISGATPVM 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + E +FF L A+ D L ++ S L + N++ + +SGL+ ++R +G + Sbjct: 186 RDSEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDITRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFW----PADL-HVIGKDILRFHA 272 IPD P YVW+DA Y+ + L + G +FW DL H IGKDI+ FH+ Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLDFDEFWNKNSKTDLYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P +F HG++ G K+SKS G I ++ + D LRY+ + Sbjct: 303 LFWPAMLEGSQYRKPTNLFVHGYVTVNGAKMSKSRGTFITARSYLDHLDADCLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 ++ D ++ + +RVN+D+ N + NL SR+ I K +DG + A E + + Sbjct: 363 LSSRIDDIDFNLEDFVQRVNSDIVNKVVNLASRNAGFIAKRFDGKLSANLAEPELYQQFV 422 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLY 449 + I E+ N+ ++A+ ++++L +RY D + PW + K + Sbjct: 423 DAA----KVIGEDYNNREYNKAIREIMALADIANRYVDEKAPWVVAKQEGKDQELQDICS 478 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 479 MGINLFRVLMTYLKPVLPGLTKR 501 >gi|221633508|ref|YP_002522733.1| methionyl-tRNA synthetase [Thermomicrobium roseum DSM 5159] gi|254782874|sp|B9KZR0|SYM_THERP RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|221156139|gb|ACM05266.1| methionyl-tRNA synthetase [Thermomicrobium roseum DSM 5159] Length = 584 Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 144/516 (27%), Positives = 231/516 (44%), Gaps = 44/516 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E + + A Y N H+GH + I AD AR+HRL G VL +G+D HG I AA+ Sbjct: 3 ETIGVFVAWPYANGDLHLGHVAGVYIPADTFARYHRLRGNRVLMVSGSDAHGTPITVAAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT + + F + L IS+D F T H + +++ + +KG I+ Sbjct: 63 REGVTPEDIFRRYHGRFLETYQQLGISFDLFTHTHTANHFRVAQDIFRTLYEKGYIFTQT 122 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYN------------------AQHNPV 157 Y D + D V Y A G + P+ Sbjct: 123 QIQLYCEYDRRFLPDRYVEGTCPYCGYPNARGDQCDNCGRTLDAIDLIDPRCRLCGQRPL 182 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 E E +FF L A+ D+LL+Y E + ++ + V +F++ GLK +SR +WG Sbjct: 183 P-RETEHFFFDLPAFTDRLLAYLERQTHWRPNVQ--HFVRNFIQDGLKPRPVSRD-LEWG 238 Query: 218 IKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDI 267 I +P P Y +MYVW +A+ YL+ + +G + W D + IGKD Sbjct: 239 IPLPI-PGYEHKVMYVWFEAVIGYLSASIEWSLAEGQPEVWQVWWRDPRARGYYFIGKDN 297 Query: 268 LRFHAIYWPAFLLS--ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 + FHAI WPA L+ +L LP + ++ F+ +G++ S S I + + D L Sbjct: 298 IPFHAIIWPAELMGYDESLNLPYDIPANEFLNLEGQQFSTSRNWAIWVPDFLSRYAPDPL 357 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 R +L +D + G +R N +L GNLV R ++ + ++G +P PGA Sbjct: 358 RDYLTSIAPETRDSEFTWQGFVERNNNELLATWGNLVHRILTFVQARFEGRVPEPGALDG 417 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 D +L + Q I + + A + ++L EV+RY D + PW + + A+ Sbjct: 418 RDHLLLDQIAAGFQRIGDLYARVELKAAQREAMALAREVNRYLDEKAPWFQIREDRAAAA 477 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 T L+V + I L +LL +P + ++ +L D Sbjct: 478 TTLFVALRAIDSLKLLLAPILPFTSEQLHRLLGYRD 513 >gi|298676112|ref|YP_003727862.1| methionyl-tRNA synthetase [Methanohalobium evestigatum Z-7303] gi|298289100|gb|ADI75066.1| methionyl-tRNA synthetase [Methanohalobium evestigatum Z-7303] Length = 679 Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 133/491 (27%), Positives = 220/491 (44%), Gaps = 40/491 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N + HIGH I AD+ R + G DV F G+D HG I A+ T Sbjct: 12 VTCGLPYANGKAHIGHLRTYIPADIYVRALKKHGQDVTFVCGSDTHGTPIVFNAEEYNTT 71 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + + ++F D+ +++ +D F T + +H+ + K+ D G +Y Y Sbjct: 72 PEELIKTYHKHFDDIFKSMNVYFDAFGTTEDATNHNRTHAIVNKLIDNGYVYSKTIEIAY 131 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQH-------NPV--------QWMEEE 163 + Y D E +G + +H +PV ++ E+E Sbjct: 132 CPVCDRYLPDRYVKGKCPHCAEAARGDECDQGCGKHLEPGELESPVCTLCGDAAEYKEQE 191 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 YFF+LS +QD L +Y E+ RN + +VK GL D ++R +WG+K P Sbjct: 192 HYFFKLSQFQDFLQNYLEN---LEGTSNARNYAMGWVKKGLDDWCITR-NLEWGVKFPGR 247 Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDG-SKAKFWPAD---LHVIGKDILRFHAIYWPAFL 279 ++YVW+DA Y++ T N + S K W D +H IG DI+ H I+WPA L Sbjct: 248 DDLVVYVWVDAPIGYISFTEEWANANNESWEKIWKDDSRIVHFIGGDIIYHHCIFWPAML 307 Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIACGK 337 A P V + G + + + SKS G V+ E G D LRY+L + K Sbjct: 308 KGAEYTQPWSVVASGMLKIENKTFSKSRGYVVWVEEDYLNHGFHPDLLRYYLATYTSHTK 367 Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397 + + ++++N++L GN RS+ K++ G IP E + +L Sbjct: 368 ELNFSWPFFQEKINSELVGVFGNFFYRSLLFAYKNF-GYIPE----GEIESDVLDNIQST 422 Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 + E M+N +A+ +SL S + YF + +PW L K + V+ +++ + Sbjct: 423 IDGYTEAMENYEFKKAIDTALSLASYGNTYFQSNEPWRLIKEDKTECGRVIANCIQIAKA 482 Query: 458 LAILLQAFVPK 468 L +L + VP+ Sbjct: 483 LVVLFEPVVPE 493 >gi|46204292|ref|ZP_00050208.2| COG0143: Methionyl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 159 Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 85/148 (57%), Positives = 103/148 (69%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M Y++T I Y N +PHIGHAY + DVLARF RLDG DV F TGTDEHGQK+ K Sbjct: 1 MTGAGTFYVTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVEK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 +A+ GVT K DQNS NFR++A +L + DDFIRTTE+RH C+ LW K+ KGDIY Sbjct: 61 SAEAFGVTPKALADQNSANFRELAKILGCTNDDFIRTTEERHKVACQALWDKLLAKGDIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQ 148 G Y GWYS+RDEA+Y +DE+ KG G Sbjct: 121 LGAYEGWYSVRDEAFYAEDELVKGEGGS 148 >gi|219683370|ref|YP_002469753.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis AD011] gi|254782852|sp|B8DT48|SYM_BIFA0 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|219621020|gb|ACL29177.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis AD011] Length = 623 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 151/528 (28%), Positives = 248/528 (46%), Gaps = 66/528 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A Sbjct: 4 IMVNVAWPYANGPRHIGHVAGFGVPSDVYARYQRMKGNDVLMVSGTDEHGTPILVEADKE 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY- 124 GVT + ++ +R + L +SYD F RTT K H + ++++ G IYKG Sbjct: 64 GVTPQELANRYNRVIANDLCNLGLSYDLFTRTTTKNHEHVVQEMFRQCLANGYIYKGTQK 123 Query: 125 -----SGWYSLRDEAYYNDDEV--YKGADG-QYYNAQH--------NPVQ--------WM 160 S +L D + + +GA G Q N + NPV + Sbjct: 124 VAISPSTGRTLPDRYIEGECPICHAQGARGDQCDNCGNELDPDELINPVSKINGETPIFE 183 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218 E E YF L A + L++ ++ + R V++F K++ T DWGI Sbjct: 184 ETEHYFLDLPALAEANLAWLKTRKGW------RPNVLNFSIGLFKEVKPRAITRDIDWGI 237 Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PA--DLHVIGK 265 +P D+P +YVW DA+ YL+ + +P+ +A +W PA + +GK Sbjct: 238 PVPVPGWIDNPNKRLYVWFDAVIGYLSASIEWARRSGDPEAWRA-WWNDPATPGYYFMGK 296 Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FH+ WP+ +L+ N L LP++V + F+ +G+K S S G VI Sbjct: 297 DNITFHSQIWPSEMLAYNGEGSKGGEPGELGRLDLPEQVVASEFMTMEGKKFSSSRGIVI 356 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 +++ VDA+RY++ D + ++ N LA GNLV+R ++I K Sbjct: 357 YVKDILSRYPVDAVRYYISAAGPESSDSDFTWAEFVRQNNEVLAASWGNLVNRVANLIAK 416 Query: 372 DYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 ++ G IP T+ D ++L+ S + ++ AL +SLV ++++Y Sbjct: 417 NF-GQIPPIVEEKMTDEDRALLAQSSAAFDTVGALIEQHRQKSALNDAMSLVGDINKYIS 475 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A +PW++K +P+R TVL+V + + LL F+P + K+++ L Sbjct: 476 ATEPWKIKD-DPERLGTVLHVAAQAVSDANHLLAPFLPHSSQKVWEAL 522 >gi|300932586|ref|ZP_07147842.1| methionyl-tRNA synthetase [Corynebacterium resistens DSM 45100] Length = 611 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 147/533 (27%), Positives = 249/533 (46%), Gaps = 69/533 (12%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +++ S A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG + A+ Sbjct: 3 QRVLTSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMIGNDVLMVSGTDEHGTPLLVQAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ + D+ +R + L +SYD F RTT + H+ + L++ + D G + Sbjct: 63 KEGVSVQELADRYNRIIVEDLVGLGLSYDLFTRTTTRNHYAVVQELFRGLYDNGYMVTQT 122 Query: 124 YSGWYS------LRDEAYYNDDEVYKGADGQYYNAQH-----------NPV--------Q 158 G S L D + D + + NPV + Sbjct: 123 TRGAISPSTGRTLPDRYIEGTCPICGATDARGDQCDNCGNQLDPEDLINPVSKINGETPE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFD 215 +++ E + L A + L ++ + ++ R V+ F + L+++ ++SR D Sbjct: 183 FVDTEHFMLDLPALAEALTTWLKGRTDW------RPNVLKFSLNLLENIRPRAMSRD-ID 235 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262 WG+ IP D+ +YVW DA+ YL+ + +P+ + K+W + Sbjct: 236 WGVPIPIEGWQDNNAKKLYVWFDAVVGYLSASIEWAWRTGDPEAWR-KWWNDPEAVSYYF 294 Query: 263 IGKDILRFHAIYWPAFLLS----------------ANLPLPKKVFSHGFILHKGEKISKS 306 +GKD + FH+ WPA LL L LP +V S F+ G K S S Sbjct: 295 MGKDNITFHSQIWPAELLGYAGEGSRGGEAGDLAEPTLNLPTEVVSSEFLTMSGSKFSSS 354 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 G VI + ++E G D LRYF+ D + D +R+N++LAN GNLV+R+V Sbjct: 355 KGVVIYVRDFLKEFGPDPLRYFIAMAGPETTDTDFTWDEFVRRINSELANEWGNLVNRTV 414 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 SM K++ G +P G T++D ++L + + + + +Q + + + + ++ Sbjct: 415 SMAHKNF-GEVPPLGTLTDADRALLDESEQAFEIVGKALQASRFKAGITEAMRIAGRANQ 473 Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y AQ+PW+L K + +R TVL+V ++V+ + +L ++P A KIF+ L Sbjct: 474 YIAAQEPWKLAKDDSQRERLGTVLHVALQVVSDINTMLTPYLPFSAQKIFETL 526 >gi|51595871|ref|YP_070062.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953] gi|68565976|sp|Q66C72|SYM_YERPS RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|51589153|emb|CAH20773.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953] Length = 675 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 133/504 (26%), Positives = 225/504 (44%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I AD+ RF R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + S+ + ISYD++ T + + +++ ++ G I Sbjct: 66 MGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYGRLKANGYIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160 S Y ++ + D KG A QY A ++P + + Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPEQYGDNCEVCGATYSPTELIDPKSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A+ D L ++ S L + N++ + SGL+ ++R +G Sbjct: 185 MRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADL-----HVIGKDILRFH 271 ++PD P YVW+DA Y+ L + G +FW D H IGKDI+ FH Sbjct: 242 EVPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWGKDAKTDLYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L +N P +F HG++ G K+SKS G I ++ + D LRY+ Sbjct: 302 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKYLDADCLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K + G + A +D + Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQL----ADQLADPVL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448 + I + N+ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 YKTFTDAATSIADAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKQEGHDADLHAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 478 SMGINLFRVLMTYLKPVLPSLTER 501 >gi|297620242|ref|YP_003708347.1| methionyl-tRNA synthetase [Methanococcus voltae A3] gi|297379219|gb|ADI37374.1| methionyl-tRNA synthetase [Methanococcus voltae A3] Length = 703 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 143/546 (26%), Positives = 248/546 (45%), Gaps = 62/546 (11%) Query: 9 ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 ++TA+AY N H+GHA I ADV RF +L G +V GTD HG I A+ GV Sbjct: 8 LTTALAYTNGPLHLGHARSTYIPADVYRRFLKLKGEEVYHVGGTDNHGVPITLTAEKEGV 67 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 V++ + D L++ +D+F +T H +T + ++++ G IY+ + Sbjct: 68 KPIDIVERYHNAIKADLDTLNVEFDNFGQTHSDVHIETSQEFYRELRKAGYIYEKEIEQF 127 Query: 128 YSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME--------------EE 163 Y + + Y D V +G + P + E Sbjct: 128 YCPKCDKYLADRYVEGLCPFCGGEARGDHCEVCGRHLEPTELKEPYCVHCNTTPELKKST 187 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 YFF+LSA + +L+ Y S + +P +N +++V L D +SR WG+ IPD Sbjct: 188 HYFFKLSALKGELIEYLNSAEK--MPEHVKNLALNWVNE-LHDWDVSR-NLKWGVPIPDC 243 Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD-------------------LHVI 263 +MYVW++A Y++ + L G K + W + +H I Sbjct: 244 DDQVMYVWLEAPIGYISFSKAL----GDKWEILWKENKENKENKKTNNNNENNNEIIHFI 299 Query: 264 GKDILRFHAIYWPAFLLSAN----LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 GKDI HA++WP L N +P V S G++ +G+K+S S V+ + ++ Sbjct: 300 GKDITVHHAVFWPGMLEGVNKVNGYKMPTAVVSGGYLTLEGKKMSTSKNWVVWVADFVKN 359 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IP 378 D LRYFL+ +D + D +KRVN +L + IGN RS+ + ++ + + Sbjct: 360 FNTDYLRYFLLANAPLYRDTDFSWDEFQKRVNTELIDNIGNFTHRSLVFANRKFEKVPLV 419 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 + D+++LS + ++ E ++ AL ++I L E + YF + +PW ++ Sbjct: 420 DENQLLDVDKALLSKSEETVLKVDELIREFNFKDALMEIILLGKEGNGYFQSNEPWAIE- 478 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498 + +R V+Y +V++ L LL F+P+ + + ++ +EN ++ KP + Sbjct: 479 -DEERLKQVIYTCCKVVKSLTYLLSPFMPEKTSALLGLM--NEENDLKLRGNELKKPKIL 535 Query: 499 LHKTFD 504 K D Sbjct: 536 FPKISD 541 >gi|189465160|ref|ZP_03013945.1| hypothetical protein BACINT_01505 [Bacteroides intestinalis DSM 17393] gi|189437434|gb|EDV06419.1| hypothetical protein BACINT_01505 [Bacteroides intestinalis DSM 17393] Length = 679 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 146/517 (28%), Positives = 247/517 (47%), Gaps = 51/517 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DV+F G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GVT + VD+ ++ IS+D + RTT K HHDT ++K+ DKG+ Sbjct: 63 RAKKEGVTPQDIVDRYHTLIKESFKEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + A+G Y + + Sbjct: 123 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210 PV E + ++ L ++ L + E H E+ R N + S++ GL+ ++S Sbjct: 183 KPVM-RETKHWYLPLDQHESWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236 Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263 R DWGI +P + ++YVW DA Y++ T L PD + W D +H I Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDTWET--WWKDPETRLIHFI 292 Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320 GKD + FH I +PA L + + LP V S+ F+ +G+KIS S + E + + Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSFILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPG 352 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D LRY L KD + + R N +L GN V+R++ + K +DG++P Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGVVPAA 412 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 G T+ D L S V E+ + + A + ++L ++Y +PW++ KT+ Sbjct: 413 GELTDYDRETLKEFSDVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKIAKTD 472 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 DR +T+L ++++++ LAI + F+P + K+ ++L Sbjct: 473 MDRVATILNISLQLVANLAIAFEPFLPFSSEKLRNML 509 >gi|224537450|ref|ZP_03677989.1| hypothetical protein BACCELL_02329 [Bacteroides cellulosilyticus DSM 14838] gi|224520976|gb|EEF90081.1| hypothetical protein BACCELL_02329 [Bacteroides cellulosilyticus DSM 14838] Length = 679 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 147/517 (28%), Positives = 246/517 (47%), Gaps = 51/517 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DV+F G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GVT + VD+ ++ IS+D + RT+ K HHDT ++K+ DKGD Sbjct: 63 RAKKEGVTPQDIVDRYHTLIKESFKEFGISFDVYSRTSSKTHHDTASEFFRKLYDKGDFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + A+G Y + + Sbjct: 123 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210 PV E + ++ L ++ L + E H E+ R N + S++ GL+ ++S Sbjct: 183 KPVM-RETKHWYLPLDQHESWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236 Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263 R DWGI +P + ++YVW DA Y++ T L PD + W D +H I Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDTWET--WWKDPETRLIHFI 292 Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320 GKD + FH I +PA L + + LP V S+ F+ +G+KIS S + E + + Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSFILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLVDFPG 352 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D LRY L KD + + R N +L GN V+R++ + K +DG++P Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGVVPAA 412 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 G TE D L S V E+ + + A + ++L ++Y +PW++ KT+ Sbjct: 413 GELTEYDRETLKEFSDVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKIAKTD 472 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 DR +T+L ++++++ LAI + F+P + K+ +L Sbjct: 473 MDRVATILNISLQLVANLAIAFEPFLPFSSEKLRKML 509 >gi|186894958|ref|YP_001872070.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+] gi|226710942|sp|B2JZK3|SYM_YERPB RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|186697984|gb|ACC88613.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+] Length = 675 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 133/504 (26%), Positives = 225/504 (44%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I AD+ RF R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + S+ + ISYD++ T + + +++ ++ G I Sbjct: 66 MGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYGRLKANGYIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160 S Y ++ + D KG A QY A ++P + + Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPEQYGDNCEVCGATYSPTELIDPKSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A+ D L ++ S L + N++ + SGL+ ++R +G Sbjct: 185 MRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADL-----HVIGKDILRFH 271 ++PD P YVW+DA Y+ L + G +FW D H IGKDI+ FH Sbjct: 242 EVPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWGKDAKTDLYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L +N P +F HG++ G K+SKS G I ++ + D LRY+ Sbjct: 302 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKYLDADCLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K + G + A +D + Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQL----ADQLADPVL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448 + I + N+ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 YKTFTDAATSIADAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLHAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 478 SMGINLFRVLMTYLKPVLPSLTER 501 >gi|162419184|ref|YP_001607553.1| methionyl-tRNA synthetase [Yersinia pestis Angola] gi|226710943|sp|A9R2M7|SYM_YERPG RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|162351999|gb|ABX85947.1| methionyl-tRNA synthetase [Yersinia pestis Angola] Length = 675 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 133/504 (26%), Positives = 225/504 (44%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I AD+ RF R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + S+ + ISYD++ T + + +++ ++ G I Sbjct: 66 MGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYGRLKANGYIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160 S Y ++ + D KG A QY A ++P + + Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPEQYGDNCEVCGATYSPTELIDPKSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A+ D L ++ S L + N++ + SGL+ ++R +G Sbjct: 185 MRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADL-----HVIGKDILRFH 271 ++PD P YVW+DA Y+ L + G +FW D H IGKDI+ FH Sbjct: 242 EVPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWGKDAKTDLYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L +N P +F HG++ G K+SKS G I ++ + D LRY+ Sbjct: 302 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKYLDADCLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K + G + A +D + Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQL----ADQLADPVL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448 + I + N+ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 YKTFTDAATSIADAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLHAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 478 SMGINLFRVLMTYLKPVLPSLTER 501 >gi|292488750|ref|YP_003531637.1| methionyl-tRNA synthetase [Erwinia amylovora CFBP1430] gi|292899904|ref|YP_003539273.1| methionyl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|291199752|emb|CBJ46873.1| methionyl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|291554184|emb|CBA21412.1| Methionyl-tRNA synthetase [Erwinia amylovora CFBP1430] gi|312172904|emb|CBX81160.1| Methionyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158] Length = 676 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 129/503 (25%), Positives = 223/503 (44%), Gaps = 42/503 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I AD+ R+ R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHQVYFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + S+ + DISYD++ T + + + +++ ++ + G I Sbjct: 66 IGIAPEQMIADMSQEHQTDFAGFDISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWME------------ 161 S Y + D V G + + +A ++P + +E Sbjct: 126 SQLYDAEKGMFLPDRFVKGTCPNCKSPDQYGDNCEVCSATYSPTELIEPKSVVSGATPVL 185 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E +FF L + L ++ S L + N++ + +SGL+ +SR +G + Sbjct: 186 RDSEHFFFDLPEFSAMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFHA 272 IP+ P YVW+DA Y+ + L + G FW D H IGKDI+ FH+ Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDRRGDIDFDAFWQQDSDAELYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P +F HG++ G K+SKS G I ++ + D+LRY+ + Sbjct: 303 LFWPAMLEGSQFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 ++ D + + +RVNAD+ N + NL SR+ I K + G + A D ++ Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQLSAELA----DPALY 418 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 I ++ RA+ ++++L +RY D Q PW + K A + Sbjct: 419 QTFVDASDSIARAWASREFSRAVREIMALADAANRYVDEQAPWVVAKQEGRDADLQAICS 478 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P LA + Sbjct: 479 MGINLFRVLMTWLKPVMPSLAER 501 >gi|330444658|ref|YP_004377644.1| methionyl-tRNA synthetase [Chlamydophila pecorum E58] gi|328807768|gb|AEB41941.1| methionyl-tRNA synthetase [Chlamydophila pecorum E58] Length = 548 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 144/516 (27%), Positives = 238/516 (46%), Gaps = 57/516 (11%) Query: 6 KLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ I++A+ Y N H GH AY + AD ARF RL G +VL+ G+DE+G I A Sbjct: 2 RVLITSALPYANGPLHFGHITGAY--LPADAYARFCRLLGDEVLYLCGSDEYGIAITLNA 59 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + AG+ + ++D + +D + L+IS D F RTT H + ++ + G I + Sbjct: 60 ERAGMGYQEYIDVYHKLHKDTFEKLNISLDFFSRTTNTFHEGVVQSFYQCLQKHGLI-EN 118 Query: 123 CYSG-WYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM---------- 160 C+S YS + + D V +G + Q A + + + Sbjct: 119 CFSQQLYSEEESRFLADRYVEGECPKCGFDRARGDECQKCGADYEAIDLLYPKSKLSGAA 178 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD- 215 E E +F L ++ LLS FI R V FV +K+L T D Sbjct: 179 LVLKETEHAYFHLEKMKEPLLS-------FIQGCNLREHVRKFVVDYIKNLRPRAITRDL 231 Query: 216 -WGIKIPDDPQYIMYVWIDALTNYLTTTGYLD------NPDGSKAKFWPAD----LHVIG 264 WG+ + D P + YVW DA Y++ G +D +P+ K +FW + + IG Sbjct: 232 SWGVSVQDFPNKVFYVWFDAPIGYIS--GSMDWAASQGDPEAWK-RFWLEEDVKYVQFIG 288 Query: 265 KDILRFHAIYWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 KD L FHA+ +PA + +LP K + S F L +GE+ SKS GN +D ++ V Sbjct: 289 KDNLPFHAVIFPAMEMGQDLPYKKADAIVSSEFYLLEGEQFSKSEGNYVDIDAFLDSYSV 348 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D LRY L D + K R N++L GN ++R ++ K+ + P Sbjct: 349 DQLRYVLAATAPESADSEFTFLDFKTRCNSELVGKFGNFINRVLAFAEKNQFVELRCPSD 408 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNP 441 E D+ L ++ + + + + A + ++ L + + YF+ Q PW+ LK+ + Sbjct: 409 LMEGDKQFLKEAQDLVDKAKSCYERYSLRSACSAIMELAALGNVYFNNQAPWKLLKEGSR 468 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 R T+L+ + + LA++ +PK A +I+++L Sbjct: 469 SRVETILFCSCFCQKLLALIAYPILPKSATEIWEML 504 >gi|89898167|ref|YP_515277.1| methionyl-tRNA synthetase [Chlamydophila felis Fe/C-56] gi|123735920|sp|Q255A6|SYM_CHLFF RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|89331539|dbj|BAE81132.1| methionyl tRNA synthetase [Chlamydophila felis Fe/C-56] Length = 551 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 144/510 (28%), Positives = 236/510 (46%), Gaps = 44/510 (8%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++A+ Y N H GH A + ADV ARF RL G DVL+ G+DE+G I A+ Sbjct: 4 RVLITSALPYANGPLHFGHIAGAYLPADVYARFRRLLGDDVLYICGSDEYGIAITLNAER 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG+ + +V+ + +D D L IS D F RTT H + ++ KG I Sbjct: 64 AGLGYQEYVNMYHKIHKDTFDKLKISLDFFSRTTNPFHKALVEDFYTQLKSKGLIENQTS 123 Query: 125 SGWYSLRDEAYYND-----------------DEVYK-GADGQYYNAQH-------NPVQW 159 YS + + D DE K GAD + + H + + Sbjct: 124 LQLYSEEENRFLADRYVEGTCPRCGFDGARGDECQKCGADYEATDLIHPRSKLSGSELVL 183 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E +F L + LL + + LP R ++ ++K+ L+ +++R WGI Sbjct: 184 KETEHAYFHLERMVEPLLDFIDKS---YLPEHVRKFIVDYIKN-LRPRAITRD-LSWGIP 238 Query: 220 IPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIGKDILRFH 271 +PD P + YVW DA Y++ T ++NP+ K FW + + IGKD + FH Sbjct: 239 VPDFPNKVFYVWFDAPIGYISGTMDWAASVNNPEAWK-DFWLEESTEYVQFIGKDNIPFH 297 Query: 272 AIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 A +PA L ++P K + S F L +G + SKS GN ID ++ +D LRY L Sbjct: 298 AAIFPAMELGQSIPYKKMDALISSEFYLLEGAQFSKSEGNYIDMDAFLDTYSLDKLRYVL 357 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDE 388 D + K R N++L GN ++R ++ K+ + ++ + + D+ Sbjct: 358 AATAPETSDSEFTFLDFKTRCNSELVGKFGNFINRVLAFAEKNGFKELVYSETLLEDKDK 417 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTV 447 L R++QE RE+ + +A + ++ L + + Y + Q PW+L K R V Sbjct: 418 KFLDDAQRIVQEAREHYSKYSLRKACSAIMELAALGNIYVNDQAPWKLLKEGLAHRVEAV 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L+ + LA++ +P A +I+++L Sbjct: 478 LFCACYCQKLLALISYPILPGTAWEIWNML 507 >gi|294649485|ref|ZP_06726908.1| methionine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] gi|292824613|gb|EFF83393.1| methionine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] Length = 717 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 147/543 (27%), Positives = 243/543 (44%), Gaps = 63/543 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I AD+ R R G DV + D HG I A+ Sbjct: 35 KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 94 Query: 66 GVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + + + RD D + +D + T + ++ K + G+I Sbjct: 95 GISPEAQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARASEIYIKNREAGNIAVRPV 153 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161 + + ++ + D KG ++ QY YNA NP + Sbjct: 154 TQLFD-PEKGMFLSDRFIKGTCPKCKSEDQYGDACEVCGTTYNATELLNPRSTLSGATPV 212 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + YFF+L + + L + LP+ N++ + ++GL D +SR +G Sbjct: 213 EKSSDHYFFKLPNFSEYLQKWTRDQGR--LPVSIANKLDEWFEAGLSDWDISRDAPYFGF 270 Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDILRF 270 +IPD P YVW+DA Y+++ Y+ PD S FW D H IGKDI+ F Sbjct: 271 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLSFDDFWKKDSDKEVYHFIGKDIVYF 330 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 HA++WPA L AN P +F +GF+ G+K+SKS G I ++ + + LRY+ Sbjct: 331 HALFWPAMLEGANYRTPSGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 390 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ +D + D ++VN+DL + N+ SR I +++ + + A E +S Sbjct: 391 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSNFNNTLSSTCAEPELVQS 450 Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRAS 445 + + Q E RE A+ ++++L + ++Y D +KPW L K + Sbjct: 451 FIDAGDSIAQAYEARE------FSAAIREIMALADKANQYIDEKKPWALAKQEGQEQQVH 504 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI--------FDI-----LFVADENRCFQSLDQR 492 V V + + RQLAI L +P LA ++ FD + VA E FQ L QR Sbjct: 505 DVCSVGINLFRQLAIYLAPVLPTLATQVQAFLQLESFDFASRQHILVAHEIAQFQPLMQR 564 Query: 493 LKP 495 + P Sbjct: 565 VDP 567 >gi|289676763|ref|ZP_06497653.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5] Length = 682 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 139/546 (25%), Positives = 240/546 (43%), Gaps = 49/546 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D AD L + +D+F T + + +++K++ D G I Sbjct: 61 RAEKEGITPEQLIANVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYKRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164 + ++ + + D KG A+ QY A + P + + Sbjct: 120 ATRSVTQYFDPEKKMFLA-DRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAIS 178 Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 +FF L A+ L S+ S L N++ ++ SGL+ +SR Sbjct: 179 GATPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266 +G +IPD+P YVW+DA Y+ + L PD +W H IGKD Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFNAYWGKGATTELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A+L P + HG++ G+K+SKS G I ++ + + LR Sbjct: 296 IVNFHALFWPAMLEGADLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPE 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDR 443 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGRQDE 471 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500 V + + + RQL I L+ +P L A K ++ + E+ + +L P L Sbjct: 472 VQAVCALGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKILLTNHQLNPFSALM 531 Query: 501 KTFDPI 506 DP+ Sbjct: 532 TRIDPV 537 >gi|145633270|ref|ZP_01789001.1| putative ATPase [Haemophilus influenzae 3655] gi|144986116|gb|EDJ92706.1| putative ATPase [Haemophilus influenzae 3655] Length = 682 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 137/503 (27%), Positives = 237/503 (47%), Gaps = 45/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G + F D HG I A Sbjct: 7 KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66 Query: 66 GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T K+ + + RD A +IS+D++ T + + ++ K+ G I Sbjct: 67 GITPEKLIAKAKADHVRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A++ L + S L E N++ + +SGL+ +SR +G Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272 +IP YVW+DA Y+ + L N +G +FW A+L H IGKDI+ FH+ Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF+HG++ G K+SKS G I + + + LRY+ + Sbjct: 302 LFWPAMLEGSGYRKPTNVFTHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361 Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + +D ++ D +RVN D+ N + NL SR+ I K ++G + A DE++ Sbjct: 362 LNDRIEDLDFNLDDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDETLF 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + ++I +++ ++A+ ++++L + ++Y D + PW + K A V Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKDAELQAVCS 477 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +PKLA + Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500 >gi|22126527|ref|NP_669950.1| methionyl-tRNA synthetase [Yersinia pestis KIM 10] gi|45441236|ref|NP_992775.1| methionyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001] gi|108806813|ref|YP_650729.1| methionyl-tRNA synthetase [Yersinia pestis Antiqua] gi|108812619|ref|YP_648386.1| methionyl-tRNA synthetase [Yersinia pestis Nepal516] gi|145598738|ref|YP_001162814.1| methionyl-tRNA synthetase [Yersinia pestis Pestoides F] gi|149366443|ref|ZP_01888477.1| methionyl-tRNA synthetase [Yersinia pestis CA88-4125] gi|153947488|ref|YP_001401424.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758] gi|165924586|ref|ZP_02220418.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165939604|ref|ZP_02228149.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|166009161|ref|ZP_02230059.1| methionyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|166211334|ref|ZP_02237369.1| methionyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|167400168|ref|ZP_02305681.1| methionyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421769|ref|ZP_02313522.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424220|ref|ZP_02315973.1| methionyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|218928663|ref|YP_002346538.1| methionyl-tRNA synthetase [Yersinia pestis CO92] gi|229841503|ref|ZP_04461662.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843614|ref|ZP_04463757.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229894284|ref|ZP_04509467.1| methionyl-tRNA synthetase [Yersinia pestis Pestoides A] gi|229903014|ref|ZP_04518130.1| methionyl-tRNA synthetase [Yersinia pestis Nepal516] gi|270486805|ref|ZP_06203879.1| methionine--tRNA ligase [Yersinia pestis KIM D27] gi|25009377|sp|Q8ZG01|SYM_YERPE RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|122980066|sp|Q1CGU4|SYM_YERPN RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|123372633|sp|Q1C9T8|SYM_YERPA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|187653901|sp|A7FJJ6|SYM_YERP3 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|187653902|sp|A4TKM9|SYM_YERPP RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|21959527|gb|AAM86201.1|AE013867_4 methionine tRNA synthetase [Yersinia pestis KIM 10] gi|45436096|gb|AAS61652.1| methionyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001] gi|108776267|gb|ABG18786.1| methionyl-tRNA synthetase [Yersinia pestis Nepal516] gi|108778726|gb|ABG12784.1| methionyl-tRNA synthetase [Yersinia pestis Antiqua] gi|115347274|emb|CAL20168.1| methionyl-tRNA synthetase [Yersinia pestis CO92] gi|145210434|gb|ABP39841.1| methionyl-tRNA synthetase [Yersinia pestis Pestoides F] gi|149290817|gb|EDM40892.1| methionyl-tRNA synthetase [Yersinia pestis CA88-4125] gi|152958983|gb|ABS46444.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758] gi|165912520|gb|EDR31152.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|165923646|gb|EDR40778.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165991716|gb|EDR44017.1| methionyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|166207105|gb|EDR51585.1| methionyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|166960254|gb|EDR56275.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050117|gb|EDR61525.1| methionyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057069|gb|EDR66832.1| methionyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229679924|gb|EEO76024.1| methionyl-tRNA synthetase [Yersinia pestis Nepal516] gi|229689222|gb|EEO81285.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229697869|gb|EEO87916.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229703682|gb|EEO90698.1| methionyl-tRNA synthetase [Yersinia pestis Pestoides A] gi|270335309|gb|EFA46086.1| methionine--tRNA ligase [Yersinia pestis KIM D27] gi|320015607|gb|ADV99178.1| methionyl-tRNA synthetase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 675 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 133/504 (26%), Positives = 225/504 (44%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I AD+ RF R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + S+ + ISYD++ T + + +++ ++ G I Sbjct: 66 MGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYGRLKANGYIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160 S Y ++ + D KG A QY A ++P + + Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPEQYGDNCEVCGATYSPTELIDPKSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A+ D L ++ S L + N++ + SGL+ ++R +G Sbjct: 185 MRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADL-----HVIGKDILRFH 271 ++PD P YVW+DA Y+ L + G +FW D H IGKDI+ FH Sbjct: 242 EVPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWGKDAKTDLYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L +N P +F HG++ G K+SKS G I ++ + D LRY+ Sbjct: 302 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKYLDADCLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K + G + A +D + Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQL----ADQLADPVL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448 + I + N+ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 YKTFTDAATSIADAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLHAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 478 SMGINLFRVLMTYLKPVLPSLTER 501 >gi|327403508|ref|YP_004344346.1| methionyl-tRNA synthetase [Fluviicola taffensis DSM 16823] gi|327319016|gb|AEA43508.1| methionyl-tRNA synthetase [Fluviicola taffensis DSM 16823] Length = 685 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 149/558 (26%), Positives = 251/558 (44%), Gaps = 55/558 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + K ++ A+ Y N H+GH + + AD+ RF R +G DV F G+DEHG I A Sbjct: 3 KSKFTVTAALPYANGPLHLGHVAGVYLPADIFVRFLRSNGHDVAFICGSDEHGAAITLRA 62 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + G+T + VD+ ++ D IS+D F RT+ + H +T + +K + +KG + Sbjct: 63 KKEGITPREIVDKYNQIIGDSFKQFGISFDIFHRTSAQIHIETAQDFFKVLEEKGKFIEE 122 Query: 123 CYSGWYSLRDEAYYND-----------------DEVYKGADGQYYNAQHNPVQWMEEEGY 165 +Y + + D D+ K NPV + + Sbjct: 123 TTEQYYDEEYQQFLADRYITGECPNCQNPNAYGDQCEKCGSALSPTDLKNPVSTLSGKSP 182 Query: 166 FFRLSAYQDKLLSYYES--HP---EFIL-------PIERRNEVI----SFVKSGLKDLSL 209 R +++ + +E P E IL P RN+VI S++ GL ++ Sbjct: 183 VLRSTSHWFLPMDRHEEWLRPWIKEGILDGKQQHDPKAWRNQVIGQCMSWIDCGLHPRAM 242 Query: 210 SRKTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHV 262 +R DWG+ +P ++YVW+DA Y++ T +G K +W + +H Sbjct: 243 TRD-LDWGVPVPLPGADGKVLYVWLDAPIGYISATKQWALDNGKDWKDYWCNEDRKLVHF 301 Query: 263 IGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV- 320 IGKD + FHAI +P L LP V ++ F+ +G+K S S + E +E Sbjct: 302 IGKDNIVFHAIIFPILLKDHGGFILPDNVPAYEFLNLEGDKFSTSRNWAVWLHEYLERYP 361 Query: 321 -GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 +D L+Y L KD + + RVN +LA+ +GN ++R++ + K Y+G +P Sbjct: 362 EKIDELKYTLTCIAPETKDAEFTWKEYQARVNNELADILGNFINRALVLTQKYYEGKVPA 421 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 G T D+ +L + I E + + A A+ + L ++Y +PW+L KT Sbjct: 422 CGELTAEDKQVLVDMKAIPARIAELVYQYKLRDAQAEAMMLARIGNKYLADNEPWKLVKT 481 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF--------QSLDQ 491 +P R T++ + +++ L ++L F+P+ A KI FV E + + Q+ DQ Sbjct: 482 DPKRVETIMNIALQITANLGLVLDPFLPETAAKIR--AFVGTEVQTWDKSGTILLQAGDQ 539 Query: 492 RLKPGFMLHKTFDPIFPR 509 P + K D R Sbjct: 540 TSTPTILFQKIDDEFVAR 557 >gi|320534024|ref|ZP_08034576.1| methionyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337] gi|320133763|gb|EFW26159.1| methionyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337] Length = 615 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 150/528 (28%), Positives = 236/528 (44%), Gaps = 63/528 (11%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +I +A+A+P N HIGH + +DV +R+ R+ G DVL +GTDEHG I AA Sbjct: 3 HILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + D+N+R + L +SYD F RTT H+ + ++ + D G + + Sbjct: 63 EGLSARELADRNNRLIVEDLVALGLSYDLFTRTTAGNHYHVVQDMFTTVRDNGYMVQQVT 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159 S D + +GA G + N + ++ Sbjct: 123 RSAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDTCGNQLDPTDLISPRSRINGETPEF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 +E +F L A L ++ + E R VI F ++ L D+ T DWG Sbjct: 183 VETTHWFLDLPALAQALGAWLD---EREASGTWRPNVIKFSQNLLDDIRPRAMTRDIDWG 239 Query: 218 IKIP---DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HVIGKD 266 I +P D P +YVW DA+ YL+ + +P+ +A +W P L + +GKD Sbjct: 240 IPVPGWEDQPTKRLYVWFDAVIGYLSASVEWARRSGDPEAWRA-WWNDPQALSYYFMGKD 298 Query: 267 ILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312 + FH+ WPA LL N L LP +V S F+ +G+K S S G VI Sbjct: 299 NIVFHSQIWPAELLGYNGQGESGGEPGRLGVLNLPTEVVSSEFLTMEGKKFSSSHGIVIY 358 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 + ++ DALRYF+ D + +R N +L G GNLV+R+ SMI K Sbjct: 359 VRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGELVAGWGNLVNRTASMIHKR 418 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 + G IP P D +L + + + AL + + LV E ++Y + Sbjct: 419 F-GQIPEPAELQAIDRVLLDAVEAGFASVGDLIAQHRQKAALGEAMRLVGEANKYVADTQ 477 Query: 433 PWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P++LK +P R +TVL+ + + L ++L F+P AN + +L Sbjct: 478 PFKLKGEDPATQARLATVLHTLAQAVADLNLMLSPFLPHAANDVDRVL 525 >gi|332173575|gb|AEE22829.1| methionyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 675 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 130/502 (25%), Positives = 225/502 (44%), Gaps = 43/502 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ RF R+ G ++ D HG + AQ Sbjct: 7 KILVTSALPYANGSIHLGHLLEHIQTDIWTRFQRMCGHEIYSVCADDAHGTPVMLKAQEL 66 Query: 66 GVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + V + + + +D+ D + YD++ T + + +++ +++D G I K Sbjct: 67 GITPEEMVARTRAEHHQDLLDFF-VEYDNYHVTHSDENKELSELIYNRLNDAGYISKRTI 125 Query: 125 SGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM------------- 160 S + + D E G A ++P + Sbjct: 126 SQLFDPEKNMFLPDRFVKGTCPSCGTEDQNGDSCDSCGATYDPTEMKNPRSVVSGATPIL 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + E +FF L + D L ++ +S L E N++ + GL+ +SR +G + Sbjct: 186 KDSEHFFFDLPQFSDMLQAWLKSD---ALQSEISNKLEEWFDKGLQQWDISRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273 IP P YVW+DA Y+ + L D D + +FW AD H IGKDI FH + Sbjct: 243 IPGAPNKFFYVWVDAPVGYMASFKNLCDRSDINFDEFWGADSDAELYHFIGKDITYFHCL 302 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L A P V HGF+ G K+SKS G I +E + + LRY+ ++ Sbjct: 303 FWPAMLEGAGFRKPTGVNVHGFVTVNGAKMSKSKGTFIKGRTYLEHLNPEYLRYYFASKL 362 Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + + ++VN+DL + N+ SR S I K +DG + + +++ Sbjct: 363 GANVTDIDLNFEDFAQKVNSDLVGKVVNIASRCASFITKRFDGKLSN----NVLEPELVA 418 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYV 450 + I + + + H+A+ +++ L + +++ DA PW K +A T V + Sbjct: 419 EFQQAQASIAQAFEERQYHKAIREIMGLADKANQFIDANAPWVTIKDESKQAFTHDVCSL 478 Query: 451 TVEVIRQLAILLQAFVPKLANK 472 + + R L + L+ VPKLA + Sbjct: 479 GINLFRMLMVYLKPVVPKLAEQ 500 >gi|270285091|ref|ZP_06194485.1| methionyl-tRNA synthetase [Chlamydia muridarum Nigg] gi|270289114|ref|ZP_06195416.1| methionyl-tRNA synthetase [Chlamydia muridarum Weiss] gi|301336487|ref|ZP_07224689.1| methionyl-tRNA synthetase [Chlamydia muridarum MopnTet14] Length = 550 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 141/511 (27%), Positives = 238/511 (46%), Gaps = 48/511 (9%) Query: 6 KLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ I++A+ Y N H GH AY + ADV ARF RL G +VL+ G+DE+G I A Sbjct: 5 RILITSALPYANGPLHFGHITGAY--LPADVYARFQRLLGKEVLYICGSDEYGIAITLNA 62 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + AG+ + +VD + +D L IS D F RTT H + ++ + DKG + Sbjct: 63 ELAGMGYQEYVDMYHKLHKDTLKKLGISVDFFSRTTNPHHPAIVQDFYRNLQDKGLMENL 122 Query: 123 CYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQH--------------NPV 157 YS +E + D V +G + Q A + + Sbjct: 123 VTDQLYSEEEEKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKDPRSKLTGKAL 182 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 E E +F L +++LL++ E L RN VI ++K+ L+ +++R WG Sbjct: 183 SLRETEHAYFHLERMKEELLTFVEG---IYLRPHMRNFVIDYIKN-LRPRAVTRD-LSWG 237 Query: 218 IKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIGKDILR 269 + +P + YVW DA Y++ T + +PD K KFW D +GKD Sbjct: 238 VPVPGLENKVFYVWFDAPIGYISGTMDWAASIGDPDAWK-KFWLDDKVTYTQFVGKDNTS 296 Query: 270 FHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 FH++ +PA + +LP K + + F+L +G + SKS GN+ID +E +D LRY Sbjct: 297 FHSVIFPAMEMGQSLPYKKVDALVTSEFLLLEGFQFSKSEGNIIDMDAFLETYSLDKLRY 356 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L D + K R N+DL GN V+R V+ K+ + P + D Sbjct: 357 VLAAIAPETSDSEFAFQEFKTRCNSDLVGKFGNFVNRVVAFAAKNGCTELSHP-QLEQQD 415 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRAST 446 ++ ++ +E ++ Q + +A + ++ L + + YF+ Q PW+L K + +R + Sbjct: 416 LEFIAEAQKLAKEAADHYQQYSLRKACSTIMELAALGNGYFNDQAPWKLAKEDLWNRVRS 475 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +L+ + LA++ +P+ A I+ ++ Sbjct: 476 ILFCACYCQKLLALISYPIMPETAWTIWGMI 506 >gi|15834921|ref|NP_296680.1| methionyl-tRNA synthetase [Chlamydia muridarum Nigg] gi|13878792|sp|Q9PL07|SYM_CHLMU RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|7190341|gb|AAF39166.1| methionyl-tRNA synthetase [Chlamydia muridarum Nigg] Length = 550 Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 141/511 (27%), Positives = 238/511 (46%), Gaps = 48/511 (9%) Query: 6 KLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ I++A+ Y N H GH AY + ADV ARF RL G +VL+ G+DE+G I A Sbjct: 5 RILITSALPYANGPLHFGHITGAY--LPADVYARFQRLLGKEVLYICGSDEYGIAITLNA 62 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + AG+ + +VD + +D L IS D F RTT H + ++ + DKG + Sbjct: 63 ELAGMGYQEYVDMYHKLHKDTLKKLGISVDFFSRTTNPHHPAIVQDFYRNLQDKGLMENL 122 Query: 123 CYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQH--------------NPV 157 YS +E + D V +G + Q A + + Sbjct: 123 VTDQLYSEEEEKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKDPRSKLTGKAL 182 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 E E +F L +++LL++ E L RN VI ++K+ L+ +++R WG Sbjct: 183 SLRETEHAYFHLERMKEELLTFVEG---IYLRPHMRNFVIDYIKN-LRPRAVTRD-LSWG 237 Query: 218 IKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIGKDILR 269 + +P + YVW DA Y++ T + +PD K KFW D +GKD Sbjct: 238 VPVPGLENKVFYVWFDAPIGYISGTMDWAASIGDPDAWK-KFWLDDKVTYTQFVGKDNTS 296 Query: 270 FHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 FH++ +PA + +LP K + + F+L +G + SKS GN+ID +E +D LRY Sbjct: 297 FHSVIFPAMEMGQSLPYKKVDALVTSEFLLLEGFQFSKSEGNIIDMDAFLETYSLDKLRY 356 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L D + K R N+DL GN V+R V+ K+ + P + D Sbjct: 357 VLAAIAPETSDSEFAFQEFKTRCNSDLVGKFGNFVNRVVAFAAKNGCTELSHP-QLEQQD 415 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRAST 446 ++ ++ +E ++ Q + +A + ++ L + + YF+ Q PW+L K + +R + Sbjct: 416 LEFIAEAQKLAKEAADHYQQYSLRKACSTIMELAALGNGYFNDQAPWKLAKEDLWNRVRS 475 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +L+ + LA++ +P+ A I+ ++ Sbjct: 476 ILFCACYCQKLLALISYPIMPETAWTIWGMI 506 >gi|170720312|ref|YP_001748000.1| methionyl-tRNA synthetase [Pseudomonas putida W619] gi|226710914|sp|B1J1D1|SYM_PSEPW RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|169758315|gb|ACA71631.1| methionyl-tRNA synthetase [Pseudomonas putida W619] Length = 681 Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 135/517 (26%), Positives = 232/517 (44%), Gaps = 46/517 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E ++ +++A+ Y N H+GH E I D+ RF +L G ++ D HG I Sbjct: 1 MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D AD L + +D+F T + + + +++ ++ D G I Sbjct: 61 RAEKEGITPEQLIANVQAEHSSDFADFL-VDFDNFHSTHSEENRELSSLIYSRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQW-------- 159 + ++ ++ + D KG A+ QY A + P + Sbjct: 120 ATRSVTQYFD-PEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAIS 178 Query: 160 ------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + + +FF+L +Q L + S L N++ ++ SGL++ +SR Sbjct: 179 GATPVLRDSQHFFFKLPDFQAMLQQWTRSG---TLQDAVANKLAEWLDSGLQEWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKD 266 +G +IP +P YVW+DA Y+ + L P+ FW D H IGKD Sbjct: 236 PYFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWNKDSKAELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A L P V HG++ G K+SKS G I ++ + + LR Sbjct: 296 IVNFHALFWPAMLEGAGLRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQPEYLR 355 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ G D + + ++VN+DL + N+ SR I K DG++ A E Sbjct: 356 YYYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNDGVMVAGDAAPE 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443 E+ L+ I E + + RA+ ++++L + + + PW L K D Sbjct: 416 LTEAFLAAAP----GIAEAYEARDFGRAMREIMALADRANAWIADKAPWSLAKQEGKQDE 471 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 + + + RQL I L+ +P LA L VA Sbjct: 472 VQAICAQGINLFRQLMIFLKPVLPVLAADAEAFLNVA 508 >gi|183602866|ref|ZP_02964227.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|241191552|ref|YP_002968946.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196957|ref|YP_002970512.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183217919|gb|EDT88569.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|240249944|gb|ACS46884.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251511|gb|ACS48450.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295794544|gb|ADG34079.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9] Length = 619 Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 151/526 (28%), Positives = 247/526 (46%), Gaps = 66/526 (12%) Query: 9 ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A GV Sbjct: 2 VNVAWPYANGPRHIGHVAGFGVPSDVYARYQRMKGNDVLMVSGTDEHGTPILVEADKEGV 61 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY--- 124 T + ++ +R + L +SYD F RTT K H + ++++ G IYKG Sbjct: 62 TPQELANRYNRVIANDLCNLGLSYDLFTRTTTKNHEHVVQEMFRQCLANGYIYKGTQKVA 121 Query: 125 ---SGWYSLRDEAYYNDDEV--YKGADG-QYYNAQH--------NPVQ--------WMEE 162 S +L D + + +GA G Q N + NPV + E Sbjct: 122 ISPSTGRTLPDRYIEGECPICHAQGARGDQCDNCGNELDPDELINPVSKINGETPIFEET 181 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKI 220 E YF L A + L++ ++ + R V++F K++ T DWGI + Sbjct: 182 EHYFLDLPALAEANLAWLKTRKGW------RPNVLNFSIGLFKEVKPRAITRDIDWGIPV 235 Query: 221 P-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PA--DLHVIGKDI 267 P D+P +YVW DA+ YL+ + +P+ +A +W PA + +GKD Sbjct: 236 PVPGWIDNPNKRLYVWFDAVIGYLSASIEWARRSGDPEAWRA-WWNDPATPGYYFMGKDN 294 Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 + FH+ WP+ +L+ N L LP++V + F+ +G+K S S G VI Sbjct: 295 ITFHSQIWPSEMLAYNGEGSKGGEPGELGRLDLPEQVVASEFMTMEGKKFSSSRGIVIYV 354 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +++ VDA+RY++ D + ++ N LA GNLV+R ++I K++ Sbjct: 355 KDILSRYPVDAVRYYISAAGPESSDSDFTWAEFVRQNNEVLAASWGNLVNRVANLIAKNF 414 Query: 374 DGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 G IP T+ D ++L+ S + ++ AL +SLV ++++Y A Sbjct: 415 -GQIPPIVEEKMTDEDRALLAQSSAAFDTVGALIEQHRQKSALNDAMSLVGDINKYISAT 473 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +PW++K +P+R TVL+V + + LL F+P + K+++ L Sbjct: 474 EPWKIKD-DPERLGTVLHVAAQAVSDANHLLAPFLPHSSQKVWEAL 518 >gi|109898216|ref|YP_661471.1| methionyl-tRNA synthetase [Pseudoalteromonas atlantica T6c] gi|123064668|sp|Q15UM1|SYM_PSEA6 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|109700497|gb|ABG40417.1| methionyl-tRNA synthetase [Pseudoalteromonas atlantica T6c] Length = 675 Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 130/502 (25%), Positives = 228/502 (45%), Gaps = 43/502 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ RF R+ G ++ D HG + AQ Sbjct: 7 KILVTSALPYANGSIHLGHLLEHIQTDIWTRFQRMCGHEIYSVCADDAHGTPVMLKAQEL 66 Query: 66 GVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + V + + +D+ D + YD++ T + + +++ +++D G I K Sbjct: 67 GITPEEMVARTREEHHQDLLDFF-VEYDNYHVTHSDENKELSELIYNRLNDAGYISKRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWM------------- 160 S + + D V GA+ Q A ++P + Sbjct: 126 SQLFDPEKNMFLPDRFVKGTCPSCGAEDQNGDSCDNCGATYDPTEMKNPRSVVSGATPIL 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + E +FF L + D L ++ +S L E N++ + + GL+ +SR +G + Sbjct: 186 KDSEHFFFDLPQFSDMLQNWLKSD---ALQSEISNKLEEWFEKGLQQWDISRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAI 273 IP P YVW+DA Y+ + L + G ++W AD H IGKDI FH + Sbjct: 243 IPGAPNKFFYVWVDAPVGYMASFKNLCDRSGINFDEYWGADSDAELYHFIGKDITYFHCL 302 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L A P V HGF+ G K+SKS G I +E + + LRY+ ++ Sbjct: 303 FWPAMLEGAGFRKPTGVNVHGFVTVNGAKMSKSKGTFIKGRTYLEHLNPEYLRYYFASKL 362 Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + + ++VN+DL + N+ SR S I K +DG + + ++++ Sbjct: 363 GANVTDIDLNFEDFAQKVNSDLVGKVVNIASRCASFITKRFDGKLSD----NVLEPALVA 418 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYV 450 I + + + H+A+ ++++L + +++ DA PW K +A T V + Sbjct: 419 EFQHAQASIAQAFEERQYHKAIREIMALADKANQFIDANAPWVTIKDESKQAFTHDVCSL 478 Query: 451 TVEVIRQLAILLQAFVPKLANK 472 + + R L + L+ VPKLA + Sbjct: 479 GINLFRLLMVYLKPVVPKLAEQ 500 >gi|219870418|ref|YP_002474793.1| methionyl-tRNA synthetase [Haemophilus parasuis SH0165] gi|254782867|sp|B8F3E3|SYM_HAEPS RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|219690622|gb|ACL31845.1| methionyl-tRNA synthetase [Haemophilus parasuis SH0165] Length = 684 Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 131/505 (25%), Positives = 242/505 (47%), Gaps = 45/505 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I A Sbjct: 5 KRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLNAD 64 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+T + +++ + + D A +IS+D++ T + + + ++KK+ G I Sbjct: 65 KLGITPEQLIEKAKADHIADFAG-FNISFDNYHSTHSEENREYTSAIYKKLKANGFIKSK 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM---------- 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 124 VISQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSVVSGST 182 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + E +FF L ++++ L ++ S L E N+V + +SGL+ +SR + Sbjct: 183 PVVKQSEHFFFDLPSFEEMLKAWTRSGS---LQPEIANKVQEWFESGLQQWDISRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRF 270 G +IPD YVW+DA Y+ + L + G FW + H IGKDI+ F Sbjct: 240 GFEIPDSENKFFYVWLDAPIGYMASFKNLCDRTGLNFDDFWKKESDAELYHFIGKDIVYF 299 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L + P VF+HG++ G+K+SKS G I ++ + + LRY+ Sbjct: 300 HSLFWPAMLEGSEYRKPTNVFAHGYVTVDGQKMSKSRGTFIQASTYLKHIDPECLRYYYA 359 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 ++ +D ++ + +RVN+D+ N + NL SR+ I K ++G + A T +++ Sbjct: 360 AKLNDRIEDLDFNLEDFVQRVNSDIVNKLVNLASRTAGFITKRFEGKL----ASTLENQA 415 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + ++I + + ++A+ ++++L + ++Y D + PW + K A V Sbjct: 416 LFDEFVAQSEQIATYFETREYNKAIREIMALTDKANKYIDDKAPWVIAKEEGTDAELQAV 475 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +PKLA + Sbjct: 476 CSMGLELFRVLMSYLKPVLPKLAER 500 >gi|303249714|ref|ZP_07335918.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302651281|gb|EFL81433.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 682 Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 133/502 (26%), Positives = 236/502 (47%), Gaps = 43/502 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I A Sbjct: 4 KMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + +++ + +IS+D++ T + + + ++KK+ G I S Sbjct: 64 GITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVIS 123 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------- 160 + + + D V KG A+ QY + + ++P+ + Sbjct: 124 QLFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIV 182 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E +FF L +++ L + S L E N++ + +SGL+ +SR +G Sbjct: 183 KESEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFP 239 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAI 273 IPD YVW+DA Y+ + L + +G +FW D H IGKDI+ FH++ Sbjct: 240 IPDAENKFFYVWLDAPIGYMASFKNLCDRNGLNFDEFWKKDSETELYHFIGKDIVYFHSL 299 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L L P VF+HG++ G K+SKS G I ++ + + LRY+ ++ Sbjct: 300 FWPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKL 359 Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 +D + +RVN+D+ N + NL SR+ S I K ++G + A DE++ + Sbjct: 360 NERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADKLEDEALFA 415 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450 ++I + +N+ ++A+ ++ L + ++Y D + PW + K A V + Sbjct: 416 EFIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSM 475 Query: 451 TVEVIRQLAILLQAFVPKLANK 472 +E+ R L L+ +P+LA + Sbjct: 476 GIELFRVLMSYLKPVLPQLAER 497 >gi|226953520|ref|ZP_03823984.1| methionyl-tRNA synthetase [Acinetobacter sp. ATCC 27244] gi|226835737|gb|EEH68120.1| methionyl-tRNA synthetase [Acinetobacter sp. ATCC 27244] Length = 721 Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 147/543 (27%), Positives = 243/543 (44%), Gaps = 63/543 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I AD+ R R G DV + D HG I A+ Sbjct: 35 KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 94 Query: 66 GVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + + + RD D + +D + T + ++ K + G+I Sbjct: 95 GISPEAQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARASEIYIKNREAGNIAVRPV 153 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161 + + ++ + D KG ++ QY YNA NP + Sbjct: 154 TQLFD-PEKGMFLSDRFIKGTCPKCKSEDQYGDACEVCGTTYNATELLNPRSTLSGATPV 212 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + YFF+L + + L + LP+ N++ + ++GL D +SR +G Sbjct: 213 EKSSDHYFFKLPNFSEYLQEWTRDQGR--LPVSIANKLDEWFEAGLSDWDISRDAPYFGF 270 Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDILRF 270 +IPD P YVW+DA Y+++ Y+ PD S FW D H IGKDI+ F Sbjct: 271 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLSFDDFWKKDSDKEVYHFIGKDIVYF 330 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 HA++WPA L AN P +F +GF+ G+K+SKS G I ++ + + LRY+ Sbjct: 331 HALFWPAMLEGANYRTPSGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 390 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ +D + D ++VN+DL + N+ SR I +++ + + A E +S Sbjct: 391 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSNFNNTLSSTCAEPELVQS 450 Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRAS 445 + + Q E RE A+ ++++L + ++Y D +KPW L K + Sbjct: 451 FIDAGDSIAQAYEARE------FSAAIREIMALADKANQYIDEKKPWALAKQEGQEQQVH 504 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI--------FDI-----LFVADENRCFQSLDQR 492 V V + + RQLAI L +P LA ++ FD + VA E FQ L QR Sbjct: 505 DVCSVGINLFRQLAIYLAPVLPTLAAQVQSFLQLESFDFASRQQILVAHEIAQFQPLMQR 564 Query: 493 LKP 495 + P Sbjct: 565 VDP 567 >gi|88811010|ref|ZP_01126266.1| Methionyl-tRNA synthetase, class Ia [Nitrococcus mobilis Nb-231] gi|88791549|gb|EAR22660.1| Methionyl-tRNA synthetase, class Ia [Nitrococcus mobilis Nb-231] Length = 678 Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 142/520 (27%), Positives = 240/520 (46%), Gaps = 57/520 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ RF +L G + + D HG I A+ Sbjct: 4 KILVTSALPYANGPIHLGHLVEYIQTDIWVRFQKLQGNECYYVCADDAHGTPIMLKAREQ 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRT--TEKRHHDTCRILWKKISDKGDIYKG 122 G+T + +++ + + D A L I +D++ T E RH T ++++++ D G I + Sbjct: 64 GITPEELIERFGTEHQADFAAFL-IEFDNYYTTHSAENRHFAT--LIYERLRDAGHIERR 120 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME--------- 161 + + + + D + KG A QY A ++P + + Sbjct: 121 EITQAFDPQMNMFLPDRYI-KGTCPRCAASDQYGDNCEVCGASYSPGELKDPVSVLSGVR 179 Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLSRK 212 E +FFRL ++ L E+ P + EV + +K GLK +SR Sbjct: 180 PVERTSEHFFFRLQDFESMLR-------EWANPAHTQEEVANKLKEWFDEGLKSWDISRD 232 Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW----PADL-HVIGKD 266 +G +IPD P YVW+DA Y+ + L + G FW A+L H IGKD Sbjct: 233 APYFGFEIPDAPNKYFYVWLDAPIGYMASFKNLCDRTGLDFDTFWLPGSEAELYHFIGKD 292 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A P ++F+HGF+ G+K+SKS G I + + + LR Sbjct: 293 IVYFHALFWPAMLEGAGFRKPTRLFAHGFLTVNGQKMSKSRGTFITARTYLHHLNPEYLR 352 Query: 327 YFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ G D + + +RVNADL + N+ SR I K + G + T Sbjct: 353 YYFAAKLGSGVHDLDLNLEDFAQRVNADLVGKLVNIASRCAGFIEKRFAGRLSA----TL 408 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443 + ++ + +I E + + R + QV++L E ++Y D QKPW L K D+ Sbjct: 409 AAPALYRKFTAQGAQIAELYEKREYGRVVRQVMALSDEANQYIDQQKPWLLAKQADQADQ 468 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 + + + + R L L+ +P++A + L + +N Sbjct: 469 VQMICTMGINLFRLLTAYLKPILPRMAQRAEAFLNLPAQN 508 >gi|313157540|gb|EFR56958.1| methionine--tRNA ligase [Alistipes sp. HGB5] Length = 691 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 140/514 (27%), Positives = 241/514 (46%), Gaps = 42/514 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 KE ++ +++A+ Y N HIGH A I +D+ R+ RL G DV+ G+DEHG I Sbjct: 14 KEFKRYLVTSALPYANGPVHIGHLAGVYIPSDIYTRYLRLRGRDVISVCGSDEHGVPITI 73 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GVT + VD+ + + L +S+D + RT+ H T ++K+ D+G Sbjct: 74 KARKEGVTPQQIVDRYHSMIKKSFEGLGMSFDIYSRTSSATHAKTASEFFRKLYDEGKFI 133 Query: 121 KGCYSGWYSLRDEAYYNDDEVY----KGADGQYYNAQ----------------HNPVQWM 160 + +Y + + D + K + + Y Q H+ V Sbjct: 134 EQTSMQYYDEETQTFLADRYIVGTCPKCGNDRAYGDQCEKCGSTLSPDELIDPHSAVSGS 193 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + ++ L Y+ L + E H E+ + + S++ GL+ ++SR Sbjct: 194 VPVKRETKHWYLPLDQYEGFLREWILEGHKEWKSNV--YGQCKSWLDGGLQPRAVSRD-L 250 Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDIL 268 DWGI +P + ++YVW DA Y++ T L PD +W ++ +H IGKD + Sbjct: 251 DWGIPVPVEGAEGKVLYVWFDAPIGYISATKDL-TPDWET--YWKSEDTKMVHFIGKDNI 307 Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDAL 325 FH I +P+ L + LP+ V ++ F+ +G+KIS S + E +EE D L Sbjct: 308 VFHCIVFPSMLKAHGGYILPENVPANEFLNLEGDKISTSRNWAVWLHEYLEEFPGKEDVL 367 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 RY L KD + + R N +L +GN V+R++ + K YDG +P G + Sbjct: 368 RYVLCANAPETKDNDFTWKDFQARNNNELVAVLGNFVNRALVLTRKYYDGEVPACGELND 427 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 D + + V + N+++ AL +++ ++Y +PW++ KT+P R Sbjct: 428 YDRQTVGEVAAVKASLESNIEHYHFREALKDAMNIARIGNKYLADTEPWKVVKTDPQRVG 487 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 T+L + +++ AI ++ F+P A KI +L V Sbjct: 488 TILNIALQITANTAIAIEPFMPFSAAKILKMLSV 521 >gi|317048837|ref|YP_004116485.1| methionyl-tRNA synthetase [Pantoea sp. At-9b] gi|316950454|gb|ADU69929.1| methionyl-tRNA synthetase [Pantoea sp. At-9b] Length = 677 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 127/504 (25%), Positives = 230/504 (45%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I AD+ R+ R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + DISYD++ T + + +++ ++ + G I Sbjct: 66 LGIAPEQMIAEMKQEHETDFAGFDISYDNYHSTHGEENRQLSELIYGRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271 +IP P YVW+DA Y+ + L + G+ +FW D H IGKDI+ FH Sbjct: 242 EIPGAPGKYFYVWLDAPIGYMGSFKNLCDKRGNIDFDEFWKKDSTTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P +F HG++ G K+SKS G I ++ + D+LRY+ Sbjct: 302 SLFWPAMLEGSQYRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ + K + G + A D ++ Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFLTKRFGGKLSAELA----DPAL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 + ++I E ++ +RA+ ++++L +RY D Q PW + K A + Sbjct: 418 YQTFTDASEKIGEAWASREYNRAIREIMALADLANRYVDEQAPWVVAKEEGRDADLQAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L+ + Sbjct: 478 SMGINLFRVLMTWLKPVLPSLSAR 501 >gi|90413229|ref|ZP_01221224.1| methionyl-tRNA synthetase [Photobacterium profundum 3TCK] gi|90325781|gb|EAS42239.1| methionyl-tRNA synthetase [Photobacterium profundum 3TCK] Length = 680 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 134/503 (26%), Positives = 228/503 (45%), Gaps = 44/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E + AD+ R+ RL G +V F D HG I AQ Sbjct: 7 KILVTCALPYANGSIHLGHMLEHVQADIWVRYQRLRGNEVHFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ + + + S+ + DIS+D++ T + + ++ ++ DKG I S Sbjct: 67 GMEPEQMIAEVSKEHQADFAGFDISFDNYHSTHSDENRELASFVYTQLKDKGYITNRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWM------------- 160 + E + D V KG A+ QY + N P + Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPIM 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + E +FF L ++D L ++ +S L E N++ + +SGL +SR +G + Sbjct: 186 KDSEHFFFDLPQFEDMLKAWTKSG---ALQTETSNKMQEWFESGLHQWDISRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272 IP + YVW+DA Y+ + L + D +FW D H IGKDI+ FH+ Sbjct: 243 IPGETGKYFYVWLDAPIGYMGSFKNLCDKRDDLDFDEFWKKDSTTELYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L A P VF HG++ G K+SKS G I +E + + LRY+ + Sbjct: 303 LFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLEHLDPECLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + D + + +RVN+D+ N I NL SR+ I K ++G + T ++ ++ Sbjct: 363 LNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFIAKRFEGKLSE----TFAEPALY 418 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLY 449 + + I E + + RA+ ++ +L + ++Y D + PW + K + Sbjct: 419 AEFANAADRIAELYETREFSRAIREITALADKANQYIDEKAPWVVAKQEGQDQELQDICS 478 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P LA + Sbjct: 479 VGINLFRVLITYLKPVMPLLAER 501 >gi|240949423|ref|ZP_04753764.1| methionyl-tRNA synthetase [Actinobacillus minor NM305] gi|240296172|gb|EER46828.1| methionyl-tRNA synthetase [Actinobacillus minor NM305] Length = 687 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 132/510 (25%), Positives = 235/510 (46%), Gaps = 49/510 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M K+ ++ A+ Y N H+GH E I AD+ RF R+ G +V F D HG I Sbjct: 1 MSNTRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGHEVHFVCADDAHGTPIML 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A G+T + +++ + +IS+D++ T + + ++KK+ + G I Sbjct: 61 NAAKQGITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSDENRELTTAMYKKLKENGFIK 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM-------- 160 S + + + D V KG A+ QY + + ++P+ + Sbjct: 121 SRVISQLFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSVVSG 179 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E E +FF L A+++ L ++ S L E N++ + +SGL+ +SR Sbjct: 180 ATPIVKESEHFFFDLPAFEEMLKAWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG-SKAKFWPAD-----LHVIGKDIL 268 +G IPD YVW+DA Y+ + L + G FW D H IGKDI+ Sbjct: 237 YFGFPIPDAENKFFYVWLDAPIGYMASFKNLCDRTGLDYQSFWQKDSTAELYHFIGKDIV 296 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH+++WPA L P +F+HG++ G K+SKS G I ++ + + LRY+ Sbjct: 297 YFHSLFWPAMLDGCEQRKPTNIFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYY 356 Query: 329 LVREIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 ++ + D D +RVN+D+ N + NL SR+ I K ++G + T + Sbjct: 357 YAAKL---NERIEDLDLSLTDFIQRVNSDIVNKLVNLASRNAGFIAKRFEGKLAT----S 409 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 D+++ + ++I + + + ++A+ ++ L + ++Y D + PW + K A Sbjct: 410 LDDQALFAEFVAQSEQIAAHYEAREFNKAIRVIMDLCDKANKYIDDKAPWVIAKEEGKEA 469 Query: 445 --STVLYVTVEVIRQLAILLQAFVPKLANK 472 V + +E+ R L L+ +P+LA + Sbjct: 470 ELQAVCSMGIELFRILMSYLKPVLPQLAER 499 >gi|262274495|ref|ZP_06052306.1| methionyl-tRNA synthetase [Grimontia hollisae CIP 101886] gi|262221058|gb|EEY72372.1| methionyl-tRNA synthetase [Grimontia hollisae CIP 101886] Length = 678 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 138/508 (27%), Positives = 230/508 (45%), Gaps = 50/508 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ ++ A+ Y N H+GH E I ADV R+ RL G V F D HG I AQ Sbjct: 5 QRKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRLRGNTVNFICADDAHGTPIMLKAQ 64 Query: 64 NAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + + D + D A DIS+D++ T + + ++ ++ + G I Sbjct: 65 QLGIEPEAMIADMQKEHEADFAG-FDISFDNYHSTHSDENRELASYIYTQLKNNGYINSR 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWMEEEG------ 164 S + E + D V KG ++ QY + N P + + Sbjct: 124 TISQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDNCGETYSPTDLINPKSAVSGAT 182 Query: 165 --------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 +FF L + D L ++ +S L E N++ + +SGL+ +SR + Sbjct: 183 PVMKDSVHFFFDLPQFGDMLKAWTKSG---ALQEEMANKMNEWFESGLQQWDISRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILR 269 G +IP +P YVW+DA Y+ + N +G+ ++W D H IGKDI+ Sbjct: 240 GFEIPGEPGKYFYVWLDAPIGYMGSFKNFCNKNGNVDFDEYWKKDSDAELYHFIGKDIVY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH+++WPA L A P VF HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 FHSLFWPAMLEGAGFRKPTNVFVHGYVTVNGAKMSKSKGTFIKASTYLKHLDPECLRYYY 359 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 ++ D + + +RVN+D+ N + NL SR+ I K +DGM+ A E Sbjct: 360 AAKLNNRIDDLDLNLEDFVQRVNSDIVNKVVNLASRNAGFINKRFDGMLSAECAEPALYE 419 Query: 389 SILSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-- 444 + R+ L E RE RA+ ++++L + ++Y D + PW + K A Sbjct: 420 EFAAAAERIGDLYEKRE------FSRAIREIMALADKANQYVDEKAPWVVAKEEGKDAEL 473 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANK 472 + + + + R L L+ +P+LA + Sbjct: 474 QAICTMGINLFRVLMTYLKPVMPELAAR 501 >gi|71892244|ref|YP_277978.1| methionyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|123747817|sp|Q492J8|SYM_BLOPB RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|71796350|gb|AAZ41101.1| methionyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 555 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 139/502 (27%), Positives = 223/502 (44%), Gaps = 42/502 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N HIGH E I AD+ R+ R+ G V F D HG I +Q Sbjct: 4 KKMLVTCALPYANGSLHIGHMLEHIQADIWVRYQRMQGNCVYFICADDAHGTAIMLKSQQ 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + + + Q + + ISYD++ T + ++ +++ +G I Sbjct: 64 LNIAPEQMIAQIRQEHQRDCYKFGISYDNYYSTHSDETRELLHDIYSRLNTRGFIKSKFI 123 Query: 125 SGWYSLRDEAYYND------------DEVYK---GADGQYYNAQH--NPVQWM------- 160 S Y + + D D+ Y A G Y + NP + Sbjct: 124 SQLYDSKKNMFLPDRFVKGICPKCKKDDQYGDNCAACGTIYTSLELINPKSVISGTSPII 183 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + E FF L A+ D L ++ S + E N+V + K GLK +SR +G K Sbjct: 184 RKSEHLFFDLPAFTDTLRTWIRSGS---IQKEVANKVEEWFKLGLKKWDISRDAPYFGFK 240 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILRFHA 272 IP+ + YVW+DA Y+ T L N + S FW ++ H IGKDI+ FH Sbjct: 241 IPNSSEKYFYVWMDAPVGYMGTFKNLCKKNKNISFNDFWGSNSKTDLYHFIGKDIIYFHC 300 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P +F HG + G KISKS G I+ + + D LRY+ + Sbjct: 301 LFWPAVLSGSQFRKPTNIFVHGHVTLNGSKISKSKGTCINVSTYLSCLNPDYLRYYYATK 360 Query: 333 IAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 ++ D + RVN+D+ N I NL SR+ I + Y+G + T + I Sbjct: 361 LSSHANDIDLNLSDFITRVNSDIINKILNLASRNSGFIHQYYNGHLSN----TLTHPLIY 416 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLY 449 ++ I + Q + + A+ +++ L E +RY D PW + K R A ++ Sbjct: 417 NMFIESRHYIGKLFQKREFNYAMREIMKLADEANRYIDKHAPWHIAKKIDRRQEALSIYS 476 Query: 450 VTVEVIRQLAILLQAFVPKLAN 471 + +++ R L I L+ +PKLAN Sbjct: 477 MGIQLFRVLMIYLKPVLPKLAN 498 >gi|330834236|ref|YP_004408964.1| methionyl-tRNA synthetase [Metallosphaera cuprina Ar-4] gi|329566375|gb|AEB94480.1| methionyl-tRNA synthetase [Metallosphaera cuprina Ar-4] Length = 568 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 149/548 (27%), Positives = 256/548 (46%), Gaps = 52/548 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAA 62 K+ +++A Y + PH+G+ I+ ADV AR+ RL +V+F +G+DEHG I A Sbjct: 2 KILVASAWPYVQSVPHLGNLIGSILSADVFARYARLKYGKENVIFVSGSDEHGTPIEIEA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 GV K DQ +++ +IS+D++ RT + H R ++ + + Sbjct: 62 IKRGVDPKSLTDQAHEYDKELFIKTWNISFDNYTRTESEVHKKFVREFLLGVAKYITVEE 121 Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYN------------------AQHN 155 Y +D+ + D V ++ A G + Sbjct: 122 EELP--YCEKDKLFLPDRFVKGICPYCGFEDARGDQCDRCGKLLTPSILINPKCAICGST 179 Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 PV + +FF L + + + + S + +P + +S++ GLK SL+R Sbjct: 180 PVM-KRTKHWFFDLRPFSEPIKKWITSSED--MPENVKGTALSWLNEGLKPRSLTRDN-A 235 Query: 216 WGIK--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPADL----HVIGKD 266 WGI P +YVW +AL YL+ T G K FW D + IGKD Sbjct: 236 WGIPAPFPGAEGKTIYVWFEALLGYLSATLEYFTKRGEPEKWKEFWNKDTSRSYYFIGKD 295 Query: 267 ILRFHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGV 322 + FHA+ PA L+ S + LP + + ++L++G+K SKS +G ID I + V Sbjct: 296 NIPFHAVILPAMLMASSTDYTLPTVIAATEYLLYEGQKFSKSRKIGIWIDEAPFI--MDV 353 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R+ L+R KD + + + VN +L + IGNLV+R ++MI++ +D +P+P Sbjct: 354 DYWRFILIRMRPEEKDMNFTWTEVIRIVNTELNDDIGNLVNRVITMIMRYFDRRVPSPTN 413 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 F E DE +L ++++ E + + +++L E + Y + + PW+ K + Sbjct: 414 FKEIDEHLLERMRETVKKVGEMFEKGKLKGGTELILALARETNGYINQKAPWDKVKVEKE 473 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502 A+ LYVT V+R +A++L +P A I+ L + + + SL + L PG ++ K Sbjct: 474 DAANTLYVTFLVVRAIALMLYPIIPNKAEAIYQQLGLDIKAETWDSLMKPLDPGHIIGKP 533 Query: 503 FDPIFPRF 510 +P+F + Sbjct: 534 -EPVFKKL 540 >gi|302184711|ref|ZP_07261384.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642] Length = 682 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 139/546 (25%), Positives = 240/546 (43%), Gaps = 49/546 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D AD L + +D+F T + + +++K++ D G I Sbjct: 61 RAEKEGITPEQLIANVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYKRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164 + ++ + + D KG A+ QY A + P + + Sbjct: 120 ATRSVTQYFDPEKKMFLA-DRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAIS 178 Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 +FF L A+ L S+ S L N++ ++ SGL+ +SR Sbjct: 179 GATPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266 +G +IP++P YVW+DA Y+ + L PD +W D H IGKD Sbjct: 236 PYFGFEIPEEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A L P + HG++ G+K+SKS G I ++ + + LR Sbjct: 296 IVNFHALFWPAMLEGAALRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNSGVMVETNAAPE 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDE 471 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500 V + + + RQL I L+ +P L A K ++ + E+ + +L P L Sbjct: 472 VQAVCALGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKTLLANHQLNPFSALM 531 Query: 501 KTFDPI 506 DP+ Sbjct: 532 TRIDPV 537 >gi|296455053|ref|YP_003662197.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301] gi|296184485|gb|ADH01367.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301] Length = 621 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 149/528 (28%), Positives = 247/528 (46%), Gaps = 66/528 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A+ Sbjct: 4 VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ +R +D+ D L +SYD F RTT H + ++K+ + G IYKG Sbjct: 64 GLTAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQ 122 Query: 125 ------SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QW 159 S +L D + + +GA G +A N PV ++ Sbjct: 123 QVAISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 + E YF L A + ++ E+ + R VI+F K++ T DWG Sbjct: 183 EQTEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWG 236 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGK 265 I +P D+P +YVW DA+ YL+ + G K+ W D + +GK Sbjct: 237 IPVPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPKCPAYYFMGK 296 Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FH+ WP+ +L+ N L LP++V + F+ +G+K S S G VI Sbjct: 297 DNITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVI 356 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 +++ VDA+RY++ D + + N +LA+ GNLV+R ++I K Sbjct: 357 YVKDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINK 416 Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 ++ G IP + T D +L S + +++ AL++ + +V ++++Y Sbjct: 417 NF-GEIPPLDEDSMTNEDRGLLEETSAAFDVVGSSIETHHQKHALSEAMRVVGDINKYIS 475 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A +PW++K + R STVL+V + + LL F+P A K+++ L Sbjct: 476 ATEPWKIKD-DQARLSTVLHVAAQAVADANHLLAPFLPHSAQKVWEAL 522 >gi|119945339|ref|YP_943019.1| methionyl-tRNA synthetase [Psychromonas ingrahamii 37] gi|187647755|sp|A1SVA5|SYM_PSYIN RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|119863943|gb|ABM03420.1| methionyl-tRNA synthetase [Psychromonas ingrahamii 37] Length = 686 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 136/512 (26%), Positives = 233/512 (45%), Gaps = 46/512 (8%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ K+ ++ A+ Y N H+GH E + AD+ RF RL G ++ F D HG I A Sbjct: 4 QQRKILVTCALPYANGPIHLGHMLEHVQADIWVRFQRLRGHNIHFICADDAHGTPIMLKA 63 Query: 63 QNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 Q G+ T + D + + D + +IS+D++ T + + ++ + + G I Sbjct: 64 QEMGIKPTDMIADIRASHESDFSG-FNISFDNYHSTHSEENQALSSQIYIALRENGYITN 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM--------- 160 S + + + D V KG AD QY A ++P + + Sbjct: 123 RTISQLFDPEKKMFLPDRFV-KGTCPDCKADDQYGDNCDACGATYSPTEMINPKSAVSGS 181 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 + E +FF L ++D L + +S L E N+V + ++GLK ++R Sbjct: 182 TPIMKDTEHFFFDLPQFEDMLKVWTKSG---ALQTEMANKVGEWFETGLKQWDITRDAPY 238 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-AKFWPAD-----LHVIGKDIL 268 +G +IPD P YVW+DA Y+ + L D +G +W D H IGKDI+ Sbjct: 239 FGFEIPDAPGKFFYVWLDAPIGYMGSFKNLCDKTEGLNFDDYWKKDSAAELYHFIGKDIV 298 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH+++WPA L A P V HG++ G K+SKS G I ++ + + LRY+ Sbjct: 299 NFHSLFWPAVLEGAGFRKPTAVNVHGYVTVNGAKMSKSKGTFIKASTYLDNLDPECLRYY 358 Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ D + + +RVN+D+ N + NL SR+ I K YDG + + + Sbjct: 359 YAAKLTSRIDDLDLNLEDFTQRVNSDVVNKLVNLASRTAGFITKKYDGQLSNHVSEPQLY 418 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RAS 445 +S + + I + + RA+ ++++L ++Y D + PW L K + Sbjct: 419 QSFIDAGT----SIAALFEQRDFARAIREIMALADIANKYIDEKAPWALAKQEGSEVKVQ 474 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + + + R L L+ +PKLA + D L Sbjct: 475 EICSMGINLFRVLMTYLKPIIPKLAARSEDFL 506 >gi|330973103|gb|EGH73169.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 593 Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 139/546 (25%), Positives = 239/546 (43%), Gaps = 49/546 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D AD L + +D+F T + + +++K++ D G I Sbjct: 61 RAEKEGITPEQLIANVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYKRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164 + ++ + + D KG A+ QY A + P + + Sbjct: 120 ATRSVTQYFDPEKKMFLA-DRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAIS 178 Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 +FF L A+ L S+ S L N++ ++ SGL+ +SR Sbjct: 179 GATPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266 +G +IPD+P YVW+DA Y+ + L PD +W H IGKD Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A L P + HG++ G+K+SKS G I ++ + + LR Sbjct: 296 IVNFHALFWPAMLEGAELRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPE 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 416 LTDAFLTAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDE 471 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500 V + + + RQL I L+ +P L A K ++ + E+ + +L P L Sbjct: 472 VQAVCALGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKTLLANHQLNPFSALM 531 Query: 501 KTFDPI 506 DP+ Sbjct: 532 TRIDPV 537 >gi|165975810|ref|YP_001651403.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|226710891|sp|B0BTA2|SYM_ACTPJ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|165875911|gb|ABY68959.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 682 Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 133/502 (26%), Positives = 235/502 (46%), Gaps = 43/502 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I A Sbjct: 4 KMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + +++ + +IS+D++ T + + + ++KK+ G I S Sbjct: 64 GITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVIS 123 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------- 160 + + + D V KG A+ QY + + ++P+ + Sbjct: 124 QLFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIV 182 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E +FF L +++ L + S L E N++ + +SGL+ +SR +G Sbjct: 183 KESEHFFFDLPSFEGMLKEWTRSGS---LQSEITNKMQEWFESGLQQWDISRDAPYFGFP 239 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAI 273 IPD YVW+DA Y+ + L + G +FW D H IGKDI+ FH++ Sbjct: 240 IPDAENKFFYVWLDAPIGYMASFKNLCDRTGLNFDEFWKKDSETELYHFIGKDIVYFHSL 299 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L L P VF+HG++ G K+SKS G I ++ + + LRY+ ++ Sbjct: 300 FWPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKL 359 Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 +D + +RVN+D+ N + NL SR+ S I K ++G + A DE++ + Sbjct: 360 NERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADKLEDEALFA 415 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450 ++I + +N+ ++A+ ++ L + ++Y D + PW + K A V + Sbjct: 416 EFIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSM 475 Query: 451 TVEVIRQLAILLQAFVPKLANK 472 +E+ R L L+ +P+LA + Sbjct: 476 GIELFRVLMSYLKPVLPQLAER 497 >gi|218675110|ref|ZP_03524779.1| putative methionyl-tRNA synthetase [Rhizobium etli GR56] Length = 348 Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 105/315 (33%), Positives = 164/315 (52%), Gaps = 28/315 (8%) Query: 187 ILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPD----DPQYIMYVWIDALTNYL 239 I+P RRNE+++ V+ GL D+S+SR + WG+ +PD D ++YVW DAL NYL Sbjct: 10 IVPAHRRNEMLALVRRGLTDISVSRSAERARGWGVPVPDGGGPDADDVVYVWFDALANYL 69 Query: 240 TTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 T G+ + + ++W +H++GK I +FHAIYWPA LLSA LP P + HG++ Sbjct: 70 TGLGHGSDQTLLQ-RYWNGGERIHIVGKGISKFHAIYWPAILLSAGLPPPSSILVHGYVT 128 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGV-DALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 G KI KS GN IDP +I+ G DALRY+L+R I G DG + + L+ + +LA Sbjct: 129 VDGRKIGKSAGNGIDPESIIDAYGTPDALRYYLLRHIRSGDDGDFSGERLEAAWSGELAG 188 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 +GNL +R ++++ + + G++P +E +L R+ ++ +H LA Sbjct: 189 QLGNLANRVLALLYQSFGGIVPP----VPENEFVLE-AHRLPGKVARAFDTYELHVGLAD 243 Query: 417 VISLVSEVDRYFDAQKPW------------ELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 + V E +R F PW E +K +R L + + +A L Sbjct: 244 IFEFVGEANRRFTKGAPWADAKTLLADPASEDRKATTERLGACLAEQIYGLATVARCLLP 303 Query: 465 FVPKLANKIFDILFV 479 F+P A + L + Sbjct: 304 FLPGSAATLHSRLGI 318 >gi|171463853|ref|YP_001797966.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193391|gb|ACB44352.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 556 Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 150/522 (28%), Positives = 236/522 (45%), Gaps = 61/522 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + +L +++A+ Y N Q HIGH E + D+ RF R+ G +V + D HG I A+ Sbjct: 5 QRRLLVTSALPYANGQIHIGHLVEYVQTDIWVRFQRMCGHEVHYVGADDTHGTPIMLRAE 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 +T K + + + D IS+D++ T + + ++ K+ D G I K Sbjct: 65 KENLTPKELIANVWKEHKRDFDNFLISFDNYYTTDSPENEKLAQSIYLKLRDAGLIEKRA 124 Query: 124 YSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWME----------- 161 Y E + D E K GA QY A ++P Sbjct: 125 IEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDNCEKCGATYSPTDLKNPFSVVSGATPI 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214 + YFF+LS + + + + L E RN++ +V +S L D +SR Sbjct: 185 KKVSDHYFFKLSDPRCEEFLRDWTQVKTPLQPEARNKMKEWVGQPGESKLGDWDISRDAP 244 Query: 215 DWGIKIPDDPQYIMYVWIDA-------LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267 +G +IPD P YVW+DA NY T G L+ + K H IGKDI Sbjct: 245 YFGFEIPDAPGKYFYVWLDAPIGYYASFLNYCQTKG-LNFDEWVKPDTTTEQYHFIGKDI 303 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALR 326 L FHA++WPA L A P VF+HGF+ GEK+SKS G +I VIE + R Sbjct: 304 LYFHALFWPATLKFAGYRTPTNVFAHGFLTVDGEKMSKSRGTLISANSVIECGFNPEWFR 363 Query: 327 YFLVREIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 Y+ ++ D D D RVN+DL N+ SRS ++K + G++ Sbjct: 364 YYFATKL---NDSMEDLDLNLQDFVARVNSDLLGKYINIASRSAGFLVKRFGGVV----- 415 Query: 383 FTESDES----ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 SDE+ +L + ++I E + + +AL V+ L +V+ + D KPWE+ K Sbjct: 416 ---SDEAMNNPLLKEIAAASEKIAELYEGREYAKALRTVMELADKVNGFVDENKPWEIAK 472 Query: 439 TNPDRAST---VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +P+R + V +T+E R L++ L+ +P++ + + L Sbjct: 473 -DPEREANLQRVCSITLEAFRMLSLYLKPVIPQVVASVEEFL 513 >gi|320539122|ref|ZP_08038793.1| methionyl-tRNA synthetase [Serratia symbiotica str. Tucson] gi|320030760|gb|EFW12768.1| methionyl-tRNA synthetase [Serratia symbiotica str. Tucson] Length = 675 Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 131/503 (26%), Positives = 227/503 (45%), Gaps = 42/503 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +KL ++ A+ Y N H+GH E I AD+ R+ R+ G +V F D HG I AQ Sbjct: 6 KKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHEVYFICADDVHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 V + + + S+ + +ISYD++ T + + +++ ++ + G I K Sbjct: 66 LSVKPEAMIAEMSQEHQQDFAGFNISYDNYHSTHSDENRELSNLIYTRLKENGFIKKRTI 125 Query: 125 SGWYS------LRDEAYYNDDEVYKGAD-----GQYYNAQHNPVQWM------------- 160 S Y L D + K AD + +A ++P + + Sbjct: 126 SQLYDPEKGMFLPDRFVKGNCPTCKAADQYGDNCEVCSATYSPTELIAPKSVVSGATPVM 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + E +FF L + L ++ S L + N++ + +SGL+ +SR +G + Sbjct: 186 RDSEHFFFDLPGFSAMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKDILRFHA 272 IPD P YVW+DA Y+ + L D +FW D H IGKDI+ FH+ Sbjct: 243 IPDAPGKYFYVWLDAPIGYIGSFKNLCDKRSDVDFDEFWCKDASTELYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L ++ P +F HG++ G K+SKS G I ++ + D LRY+ + Sbjct: 303 LFWPAMLEGSHFRKPTNLFVHGYVTVDGAKMSKSRGTFIKAGTYLQYLDADCLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 ++ D + + +RVN D+ N + NL SR+ I K + G + A +D ++ Sbjct: 363 LSSRIDDIDLNLEDFVQRVNTDIVNKVVNLASRNAGFISKRFGGQL----ADKLADPALY 418 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + I + ++ RA+ ++++L +RY D Q PW + K T+ Sbjct: 419 HTFVDAAERIGDAYASREFSRAIREIMALADLANRYVDTQAPWVVAKEAGRDTDLQTICS 478 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P LA + Sbjct: 479 MGINLFRVLMTYLKPVLPMLATR 501 >gi|322514619|ref|ZP_08067650.1| methionyl-tRNA synthetase [Actinobacillus ureae ATCC 25976] gi|322119453|gb|EFX91552.1| methionyl-tRNA synthetase [Actinobacillus ureae ATCC 25976] Length = 685 Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 237/505 (46%), Gaps = 43/505 (8%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ K+ ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I A Sbjct: 4 QKRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLNA 63 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+T + +++ + +IS+D++ T + + + ++KK+ G I Sbjct: 64 AKQGITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENRELTTEMYKKLRANGFIKSR 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM---------- 160 S + + + D V KG A+ QY + + ++P+ + Sbjct: 124 VISQLFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGAT 182 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 E + +FF L +++ L + S L E N++ + +SGL+ +SR + Sbjct: 183 PIVKESKHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRF 270 G IPD YVW+DA Y+ + L + G +FW D H IGKDI+ F Sbjct: 240 GFPIPDAENKFFYVWLDAPIGYMASFKNLCDRSGLNFDEFWKKDSETELYHFIGKDIVYF 299 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L L P VF+HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 HSLFWPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYA 359 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 ++ +D + +RVN+D+ N + NL SR+ S I K ++G + A DE+ Sbjct: 360 AKLNERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----AEKLEDEA 415 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + + ++I + +N+ ++A+ ++ L + ++Y D + PW + K A V Sbjct: 416 LFAEFIAQSEQIATHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGREAELQAV 475 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +P+LA + Sbjct: 476 CSMGIELFRVLMSYLKPVLPQLAER 500 >gi|308187517|ref|YP_003931648.1| Methionyl-tRNA synthetase [Pantoea vagans C9-1] gi|308058027|gb|ADO10199.1| Methionyl-tRNA synthetase [Pantoea vagans C9-1] Length = 677 Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 130/505 (25%), Positives = 233/505 (46%), Gaps = 46/505 (9%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I AD+ R+ R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65 Query: 65 AGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ ++ + S + D A ++SYD++ T + + +++ ++ + G I Sbjct: 66 LGIAPEQMIAEMKSEHEADFAG-FNVSYDNYHSTHGDENRELSALIYGRLKENGFIKNRT 124 Query: 124 YSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME---------- 161 S Y ++ + D KG + + +A ++P + ++ Sbjct: 125 ISQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCSATYSPTELIDPKSVVSGATP 183 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 E +FF L ++ L ++ S L + N++ + +SGL+ +SR +G Sbjct: 184 ILRDSEHFFFDLPSFSAMLQAWTRSGA---LQDQVANKMQEWFESGLQQWDISRDAPYFG 240 Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRF 270 +IPD P YVW+DA Y+ + L + G +FW D H IGKDI+ F Sbjct: 241 FEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDIDFDEFWRKDSTTELYHFIGKDIVYF 300 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I ++ + D+LRY+ Sbjct: 301 HSLFWPAMLEGSNFRKPNNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYA 360 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG + A +D + Sbjct: 361 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFDGKL----AAELADPA 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + ++I + + RA+ ++++L +RY D Q PW + K A + Sbjct: 417 LYQTFVDASEKIGDAWAAREYSRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 476 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L+ + Sbjct: 477 CSMGINLFRILMTWLKPVLPSLSAR 501 >gi|148825859|ref|YP_001290612.1| methionyl-tRNA synthetase [Haemophilus influenzae PittEE] gi|187647723|sp|A5UBS8|SYM_HAEIE RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|148716019|gb|ABQ98229.1| methionyl-tRNA synthetase [Haemophilus influenzae PittEE] Length = 682 Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 136/503 (27%), Positives = 239/503 (47%), Gaps = 45/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G + F D HG I A Sbjct: 7 KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + RD A +IS+D++ T + + ++ K+ G I Sbjct: 67 GITPEELIAKAKADHMRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A++ L + S L E N++ + +SGL+ +SR T +G Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDTPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272 +IP YVW+DA Y+ + L N +G +FW A+L H IGKDI+ FH+ Sbjct: 242 EIPGVKDKFFYVWLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF+HG++ G K+SKS G I + + + LRY+ + Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361 Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + +D ++ + +RVN D+ N + NL SR+ I K ++G + A DE++ Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDEALF 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + ++I +++ ++A+ ++++L + ++Y D + PW + K A V Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +PKLA + Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500 >gi|50120348|ref|YP_049515.1| methionyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043] gi|68565978|sp|Q6D7B6|SYM_ERWCT RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|49610874|emb|CAG74319.1| methionyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043] Length = 676 Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 131/504 (25%), Positives = 226/504 (44%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E + AD+ R+ R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + S+ + +ISYD++ T + + + +++ ++ + G I Sbjct: 66 MGIAPEQMIAAMSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYGRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160 S Y ++ + D KG A QY A ++ + + Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAADQYGDNCEVCGATYSTTELIEPKSAVSGATPE 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A+ D L ++ S L + N++ + SGL+ ++R +G Sbjct: 185 MRESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271 ++PD P YVW+DA Y+ + L + G FW D H IGKDI+ FH Sbjct: 242 EVPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDDFWKKDSDADLYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P +F HG++ G K+SKS G I ++ + D LRY+ Sbjct: 302 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K +DG + A +D + Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGKL----ADKLADAEL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 + I E ++ RA+ ++++L +RY D Q PW + K A + Sbjct: 418 YKTFTDAGASIAEAYSSRESGRAIREIMALADIANRYVDEQAPWVVAKVEGRDADLQAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 478 SMGINLFRVLMTYLKPVLPALTQR 501 >gi|307545318|ref|YP_003897797.1| methionyl-tRNA synthetase [Halomonas elongata DSM 2581] gi|307217342|emb|CBV42612.1| methionyl-tRNA synthetase [Halomonas elongata DSM 2581] Length = 678 Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 131/501 (26%), Positives = 224/501 (44%), Gaps = 45/501 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ RF + G D + D HG I A+ Sbjct: 8 KILVTSALPYANGAIHLGHLLEYIQTDIWVRFQKSRGHDCHYVCADDAHGTAIMLRAEQE 67 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG-------- 117 G+T++ +D+ SR + + +D++ T + + +++ ++ +KG Sbjct: 68 GITSEALIDRVSREHQADFARFGVGFDNYHSTHSEENRYFSELIYTRLREKGHIATRDIE 127 Query: 118 ---DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME------------- 161 D KG + ++ E G + + A + P + ++ Sbjct: 128 QMYDPAKGLFLADRFIKGTCPKCRTEDQYGDNCEACGATYTPAELIDPVSAISGATPEVR 187 Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 YFF+L + D + + + H + P + RN+++ + +SG + +SR +G + Sbjct: 188 SSTHYFFKLPDFADFMHEWINDGH---VQP-QIRNKLLEWFESGFNEWDISRDAPYFGFE 243 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAI 273 IPD P YVW+DA YL + L + +G +W +D H IGKDI+ FHA+ Sbjct: 244 IPDAPGKYFYVWLDAPIGYLASFKNLCDREGIDFDAYWNSDSEAEVYHFIGKDIVYFHAL 303 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L A + P V HGF+ G K+SKS G I E + + LRY+ ++ Sbjct: 304 FWPAMLHGAGMRTPTAVNCHGFVTVNGAKMSKSRGTFIKAATYAEHLNPEYLRYYFAAKL 363 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 G D + + +RVN+DL + N+ SR I K G + A + ++ Sbjct: 364 TAGVDDLDLNLEDFAQRVNSDLVGKVVNIASRCAGFIKKLGGGKLSAHCAEPQRLARFIA 423 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL---Y 449 EI E+ + + RA+ +++ L E + Y +PW L K R VL Sbjct: 424 AGD----EIAEHYEAREFGRAMRRIMELADEANTYIAEAEPWVLAKQE-GREQEVLDICS 478 Query: 450 VTVEVIRQLAILLQAFVPKLA 470 V + + RQL + L VP +A Sbjct: 479 VGINLFRQLMVYLAPVVPSMA 499 >gi|110639074|ref|YP_679283.1| methionyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406] gi|123163345|sp|Q11RM3|SYM_CYTH3 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|110281755|gb|ABG59941.1| methionyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406] Length = 689 Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 143/513 (27%), Positives = 236/513 (46%), Gaps = 47/513 (9%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N HIGH A + AD+ ARF R G +VLF G+DEHG I A+ GV Sbjct: 10 ITSALPYANGPVHIGHLAGVYVPADIYARFLRSKGENVLFIGGSDEHGVPITIRAKKEGV 69 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + VD+ + + L IS+D + RT+ K H +T +KK+ + G + + Sbjct: 70 TPQQVVDKYHVQIKQSFEELGISFDIYSRTSSKIHAETSSEYFKKLYEDGKFIEQTSEQY 129 Query: 128 YSLRDEAYYND-----------------DEVYKGADGQYYNAQHNPVQWMEEEG------ 164 Y + E + D D+ K + NP + E Sbjct: 130 YDPKAEQFLADRYIIGTCPKCGNENAYGDQCEKCGSTLSPSELINPRSTLSGEKPVMKST 189 Query: 165 --YFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 +F L Y+ L + E H + + + S++ GL+ +++R DWG+ +P Sbjct: 190 KHWFLPLDQYEPWLKQWILEDHKNWKTNV--YGQCKSWLDQGLQPRAVTRD-LDWGVPVP 246 Query: 222 --DDPQYIMYVWIDALTNYLTTTG-YLDNPD-------GSKAKFWPAD----LHVIGKDI 267 ++YVW DA Y++ Y N + + FW D +H IGKD Sbjct: 247 VAGAEGKVLYVWFDAPIGYISAAKDYFKNSEIKAVHKNNTWEDFWKKDDTKLVHFIGKDN 306 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324 + FH I +PA L + + LP V ++ F+ +G+KIS S + E +EE D Sbjct: 307 IVFHCIIFPAMLKAEGSYILPDNVPANEFMNLEGDKISTSRNWAVWLHEYLEEFKGKQDV 366 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N +L GN V+R++ + K YD +IP G Sbjct: 367 LRYALCANAPETKDNDFTWRDFQARNNNELVAIYGNFVNRALVLTHKYYDSVIPALGKLE 426 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 SDE ++ + +I +++ AL ++ L ++Y +PW++ K NP+R Sbjct: 427 ASDEGVIMMLKEFPAKIAASIEQYRFREALGFMMDLARLGNKYLADTEPWKIYKENPERV 486 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 T+L++ +++ LAI+ + F+P + K+F +L Sbjct: 487 KTILHIGLQIAANLAIVSEPFIPFTSAKLFTML 519 >gi|309797413|ref|ZP_07691806.1| methionyl-tRNA synthetase [Escherichia coli MS 145-7] gi|308119037|gb|EFO56299.1| methionyl-tRNA synthetase [Escherichia coli MS 145-7] Length = 655 Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 130/488 (26%), Positives = 224/488 (45%), Gaps = 45/488 (9%) Query: 22 IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81 +GH E I ADV R+ R+ G +V F D HG I AQ G+T + + + S+ + Sbjct: 1 LGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQ 60 Query: 82 DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 +ISYD++ T + + +++ ++ + G I S Y ++ + D Sbjct: 61 TDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTISQLYD-PEKGMFLPDRF 119 Query: 142 YKG------ADGQY------YNAQHNPVQWME--------------EEGYFFRLSAYQDK 175 KG A QY A ++P + +E E +FF L ++ + Sbjct: 120 VKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEM 179 Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235 L ++ S L + N++ + +SGL+ +SR +G +IP+ P YVW+DA Sbjct: 180 LQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAP 236 Query: 236 TNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLP 287 Y+ + L + G F W D H IGKDI+ FH+++WPA L +N P Sbjct: 237 IGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKP 296 Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGL 346 +F HG++ G K+SKS G I + D+LRY+ +++ D + + Sbjct: 297 TNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDF 356 Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 +RVNAD+ N + NL SR+ I K +DG++ A +D + + + I E + Sbjct: 357 VQRVNADIVNKVVNLASRNAGFINKRFDGVL----AGELADPQLYKTFTDAAEVIGEAWE 412 Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQA 464 ++ +A+ ++++L +RY D Q PW + K A + + + + R L L+ Sbjct: 413 SREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKP 472 Query: 465 FVPKLANK 472 +PKL + Sbjct: 473 VLPKLTER 480 >gi|149378169|ref|ZP_01895886.1| Methionyl-tRNA synthetase [Marinobacter algicola DG893] gi|149357531|gb|EDM46036.1| Methionyl-tRNA synthetase [Marinobacter algicola DG893] Length = 677 Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 125/503 (24%), Positives = 227/503 (45%), Gaps = 42/503 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K++ + +++A+ Y N H+GH E I D+ R+ ++ G + + D HG I Sbjct: 7 KQQRDILVTSALPYANGPIHLGHLLEYIQTDIWVRYQKMRGQNCYYVCADDAHGTAIMLR 66 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++++ +D+ + I +D++ T + + +++++ + G I Sbjct: 67 AEREGISSESLIDRIRDEHQQDFGGFHIRFDNYYTTHSEENRQFSEYIYRQLQENGHIAT 126 Query: 122 GCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM---------- 160 + + + D E G + + A + P + + Sbjct: 127 RKITQAFDPEKNMFLADRFIKGTCPKCKTEDQYGDNCEACGATYTPAELINPRSAVSGAT 186 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 E E YFFRL + D L ++ S L + N++ ++ +GL++ +SR + Sbjct: 187 PVDKESEHYFFRLPEFADFLANWTRSG---TLQPQVANKLAEWLDAGLQEWDISRDAPYF 243 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRF 270 G +IPD P YVW+DA YL + L N +G FW AD H IGKDI+ F Sbjct: 244 GFEIPDAPGKYFYVWLDAPIGYLASFKNLCNREGIDFEHFWKADSTAEVYHFIGKDIINF 303 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 HA++WP+ L SA P V++HGF+ G+K+SKS G I ++ + + LRY+ Sbjct: 304 HALFWPSMLHSAGFRTPSAVWAHGFVTVNGKKMSKSRGTFIMARTYLDHLDPEYLRYYFA 363 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 ++ D + + RVN+DL + N+ SRS I K +DG + G TE ++ Sbjct: 364 AKLTGSVDDMDLNLEDFAARVNSDLVGKVVNIASRSAGFITKRFDGQL---GTVTEHEK- 419 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTV 447 L EI + + + RA+ +++ L ++Y + ++PW + K + D + Sbjct: 420 -LKEFIEAGDEIADFFEAREFGRAMRRIMELADIANQYVNDEQPWVIAKQDGQDDNLQAI 478 Query: 448 LYVTVEVIRQLAILLQAFVPKLA 470 + + L L +P+ A Sbjct: 479 CTNAINMFHLLMTYLAPVLPETA 501 >gi|269219273|ref|ZP_06163127.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332] gi|269211420|gb|EEZ77760.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332] Length = 604 Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 155/527 (29%), Positives = 239/527 (45%), Gaps = 66/527 (12%) Query: 8 YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +I +A+A+P N HIGH + +DV +R+ R+ G DVL +GTDEHG I AA+ Sbjct: 5 HILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMRGEDVLMVSGTDEHGTPILVAAEA 64 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG------- 117 G T K D+N+R + L +SYD F RTT H + +++ D G Sbjct: 65 EGKTPKQLADENNRIIVEDLVALGLSYDLFTRTTSVNHEHVVQSMFEVCRDNGYMIVQQQ 124 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV--YKGADGQYYNAQHN---------PVQWMEEEG-- 164 ++ +G +L D + +GA G + N PV + + Sbjct: 125 NVAIDPVTG-NTLPDRYIEGTCPICGSEGARGDQCDVCGNQLDPQDLIDPVSKVSGQAPR 183 Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--W 216 YF + A +KL + + + E R VI F K L+D+ T D W Sbjct: 184 FEVTDHYFLDVPALAEKLGEWLD---DVEATGEWRPNVIVFSKHLLEDVRPRAMTRDISW 240 Query: 217 GIKIP---DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK--------FW--PADL--H 261 GI +P D P +YVW DA+ YL+ + + K +W P L + Sbjct: 241 GIPVPGWEDQPNKRLYVWFDAVIGYLSASVEWARRRAAAGKGTAEDWRKWWNDPEALSYY 300 Query: 262 VIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSL 307 +GKD + FH+ WPA LL+ N L LP +V + F+ +G+K S S Sbjct: 301 FMGKDNIVFHSQIWPAELLAYNGEGSRGGEPGKLGRLNLPTQVVASEFLTMEGKKFSSSK 360 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 VI +V+ DALRYF+ D + +R N++L G GNLV+R+ + Sbjct: 361 NVVIYVRDVLSRYQPDALRYFISIAGPESSDADFTWAEFVRRNNSELVAGWGNLVNRTAA 420 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 MI K++ G IPTPG E D +L + E++ N AL +++ LV E + Y Sbjct: 421 MIAKNF-GEIPTPGQPEEVDAELLDAVRNGFATVGESIANHGQRAALTEIMRLVGEANAY 479 Query: 428 FDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +P++LK +R +TVL+ + + L ++ F+P +N I Sbjct: 480 VAKTEPFKLKAPEQRERLATVLHTLAQAVWDLNTMMSVFLPHSSNAI 526 >gi|307245178|ref|ZP_07527269.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254125|ref|ZP_07535970.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258589|ref|ZP_07540324.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853822|gb|EFM86036.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862825|gb|EFM94774.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867246|gb|EFM99099.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 675 Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 132/501 (26%), Positives = 235/501 (46%), Gaps = 43/501 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I A G Sbjct: 1 MLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQG 60 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + +++ + +IS+D++ T + + + ++KK+ G I S Sbjct: 61 ITPEQLIEKAKTDHIADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVISQ 120 Query: 127 WYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM-------------- 160 + + + D V KG A+ QY + + ++P+ + Sbjct: 121 LFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIVK 179 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E E +FF L +++ L + S L E N++ + +SGL+ +SR +G I Sbjct: 180 ESEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFPI 236 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAIY 274 PD YVW+DA Y+ + L + +G +FW D H IGKDI+ FH+++ Sbjct: 237 PDAENKFFYVWLDAPIGYMASFKNLCDRNGLNFDEFWKKDSETELYHFIGKDIVYFHSLF 296 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L L P VF+HG++ G K+SKS G I ++ + + LRY+ ++ Sbjct: 297 WPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKLN 356 Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 +D + +RVN+D+ N + NL SR+ S I K ++G + A DE++ + Sbjct: 357 ERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADQLEDEALFAE 412 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451 ++I + +N+ ++A+ ++ L + ++Y D + PW + K A V + Sbjct: 413 FIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGREAELQAVCSMG 472 Query: 452 VEVIRQLAILLQAFVPKLANK 472 +E+ R L L+ +P+LA + Sbjct: 473 IELFRVLMSYLKPVLPQLAER 493 >gi|307260824|ref|ZP_07542510.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869391|gb|EFN01182.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 675 Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 132/501 (26%), Positives = 235/501 (46%), Gaps = 43/501 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I A G Sbjct: 1 MLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQG 60 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + +++ + +IS+D++ T + + + ++KK+ G I S Sbjct: 61 ITPEQLIEKAKTDHIADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVISQ 120 Query: 127 WYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM-------------- 160 + + + D V KG A+ QY + + ++P+ + Sbjct: 121 LFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIVK 179 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E E +FF L +++ L + S L E N++ + +SGL+ +SR +G I Sbjct: 180 ESEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFPI 236 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAIY 274 PD YVW+DA Y+ + L + +G +FW D H IGKDI+ FH+++ Sbjct: 237 PDAENKFFYVWLDAPIGYMASFKNLCDRNGLNFDEFWKKDSETELYHFIGKDIVYFHSLF 296 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L L P VF+HG++ G K+SKS G I ++ + + LRY+ ++ Sbjct: 297 WPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKLN 356 Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 +D + +RVN+D+ N + NL SR+ S I K ++G + A DE++ + Sbjct: 357 ERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADQLEDEALFAE 412 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451 ++I + +N+ ++A+ ++ L + ++Y D + PW + K A V + Sbjct: 413 FIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGREAELQAVCSMG 472 Query: 452 VEVIRQLAILLQAFVPKLANK 472 +E+ R L L+ +P+LA + Sbjct: 473 IELFRVLMSYLKPVLPQLAER 493 >gi|190149626|ref|YP_001968151.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303252595|ref|ZP_07338758.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|226710890|sp|B3H0J7|SYM_ACTP7 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|189914757|gb|ACE61009.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648563|gb|EFL78756.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 682 Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 133/502 (26%), Positives = 235/502 (46%), Gaps = 43/502 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I A Sbjct: 4 KMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + +++ + +IS+D++ T + + + ++KK+ G I S Sbjct: 64 GITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVIS 123 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------- 160 + + + D V KG A+ QY + + ++P+ + Sbjct: 124 QLFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIV 182 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E +FF L +++ L + S L E N++ + +SGL+ +SR +G Sbjct: 183 KESEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFP 239 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAI 273 IPD YVW+DA Y+ + L + G +FW D H IGKDI+ FH++ Sbjct: 240 IPDAENKFFYVWLDAPIGYMASFKNLCDRTGLNFDEFWKKDSETELYHFIGKDIVYFHSL 299 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L L P VF+HG++ G K+SKS G I ++ + + LRY+ ++ Sbjct: 300 FWPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKL 359 Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 +D + +RVN+D+ N + NL SR+ S I K ++G + A DE++ + Sbjct: 360 NERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADKLEDEALFA 415 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450 ++I + +N+ ++A+ ++ L + ++Y D + PW + K A V + Sbjct: 416 EFIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSM 475 Query: 451 TVEVIRQLAILLQAFVPKLANK 472 +E+ R L L+ +P+LA + Sbjct: 476 GIELFRVLMSYLKPVLPQLAER 497 >gi|206978214|ref|ZP_03239094.1| putative methionyl-tRNA synthetase [Bacillus cereus H3081.97] gi|206743573|gb|EDZ55000.1| putative methionyl-tRNA synthetase [Bacillus cereus H3081.97] Length = 544 Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 136/540 (25%), Positives = 247/540 (45%), Gaps = 54/540 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K DQ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKDIADQYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ + E+ + R N + +VK GL+D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKTAVENVKQ--TGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G +FW ++ +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGEDDQEFWDSEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + + Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIDVELKDKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + + + E ++ AL + V ++YFD ++PW+ ++ NP +Y Sbjct: 418 ----EGLYKHVGEAIEKTKFKVALESIFDAVRFANKYFDEKQPWKQREDNPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V +I LL+ F+P + +I + L + + N +P L D + P F Sbjct: 474 CVYLIANFVNLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524 >gi|66047113|ref|YP_236954.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a] gi|75500945|sp|Q4ZPK6|SYM_PSEU2 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|63257820|gb|AAY38916.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta subunit, C-terminal [Pseudomonas syringae pv. syringae B728a] Length = 682 Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 139/546 (25%), Positives = 239/546 (43%), Gaps = 49/546 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D AD L + +D+F T + + +++K++ D G I Sbjct: 61 RAEKEGITPEQLIANVKAEHSADFADFL-VEFDNFHSTHSDENRELSSMIYKRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164 + ++ + + D KG A+ QY A + P + + Sbjct: 120 ATRSVTQYFDPEKKMFLA-DRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAIS 178 Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 +FF L A+ L S+ S L N++ ++ SGL+ +SR Sbjct: 179 GATPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266 +G +IPD+P YVW+DA Y+ + L PD +W H IGKD Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A L P + HG++ G+K+SKS G I ++ + + LR Sbjct: 296 IVNFHALFWPAMLEGAELRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPE 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDR 443 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 416 LTDAFLTAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGRQDE 471 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500 V + + + RQL I L+ +P L A K ++ + E+ + +L P L Sbjct: 472 VQAVCALGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKTLLANHQLNPFSALM 531 Query: 501 KTFDPI 506 DP+ Sbjct: 532 TRIDPV 537 >gi|217962514|ref|YP_002341086.1| methionyl-tRNA synthetase [Bacillus cereus AH187] gi|229142350|ref|ZP_04270869.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26] gi|226695275|sp|B7HVW2|SYM_BACC7 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|217064569|gb|ACJ78819.1| putative methionyl-tRNA synthetase [Bacillus cereus AH187] gi|228641120|gb|EEK97432.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26] Length = 544 Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 136/540 (25%), Positives = 247/540 (45%), Gaps = 54/540 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K DQ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKDIADQYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ + E+ + R N + +VK GL+D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKTAVENVKQ--TGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G +FW ++ +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGEDDQEFWDSEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + + Sbjct: 358 VNAPENRDTDFSWREFLYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIDVELKDKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + + + E ++ AL + V ++YFD ++PW+ ++ NP +Y Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDEKQPWKQREDNPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V +I LL+ F+P + +I + L + + N +P L D + P F Sbjct: 474 CVYLIANFVNLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524 >gi|270284514|ref|ZP_05966259.2| methionine--tRNA ligase [Bifidobacterium gallicum DSM 20093] gi|270277051|gb|EFA22905.1| methionine--tRNA ligase [Bifidobacterium gallicum DSM 20093] Length = 620 Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 147/527 (27%), Positives = 238/527 (45%), Gaps = 64/527 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A Sbjct: 4 IMVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY- 124 GVT + D+ +R + L +SYD F RTT K H + L+++ G IYK Sbjct: 64 GVTAQELADRYNRVIVNDLCNLGLSYDLFTRTTTKNHEHVVQELFRQCLKNGYIYKDTQK 123 Query: 125 -----SGWYSLRDEAYYNDDEV--YKGADGQYYNAQHN---------PVQ--------WM 160 S +L D + + +GA G +A N PV + Sbjct: 124 VAISPSTGRTLPDRYIEGECPICHTQGARGDQCDACGNELDPDELINPVSKINGETPIFQ 183 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218 + E YF L A ++ + E + R VI+F + +KD+ T DWGI Sbjct: 184 DSEHYFLDLPALKEANEQWLEGRTGW------RTGVINFSRGLMKDVKPRAITRDIDWGI 237 Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW----PADLHVIGKD 266 IP D+P +YVW DA+ YL+ + G ++W + +GKD Sbjct: 238 PIPVPGWIDNPNKRLYVWFDAVIGYLSASIEWARRKGDPELWREWWNDPSTPGYYFLGKD 297 Query: 267 ILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312 + FH+ WP+ +L+ N L +P++V + F+ +G K S S G VI Sbjct: 298 NITFHSQIWPSEILAYNGEGDKGGEPGELGKLNMPEQVVASEFMTMEGRKFSSSRGIVIY 357 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 +++ + VDA+RY++ D + + N +LA GNLV+R +++ K+ Sbjct: 358 VKDILAKYPVDAVRYYISVAGPENSDSDFTWSEFVRHNNEELAASWGNLVNRVANLMHKN 417 Query: 373 YDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 + G +P TE D+++L + + + AL + + LV ++++Y A Sbjct: 418 F-GEVPAMFESEMTEQDQALLDEAADAFDTVGALLDQHHQKNALNEAMRLVGDINKYISA 476 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +PW++K NP R TVL+V + + LL F+P A +++ L Sbjct: 477 TEPWKIKD-NPKRLGTVLHVAAQAVSDANHLLAPFLPHSAQLVWEAL 522 >gi|330508605|ref|YP_004385033.1| methionyl-tRNA synthetase [Methanosaeta concilii GP-6] gi|328929413|gb|AEB69215.1| methionyl-tRNA synthetase [Methanosaeta concilii GP-6] Length = 668 Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 132/497 (26%), Positives = 235/497 (47%), Gaps = 40/497 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ + Y N H+GH + AD+ R R G +VLF G+D HG I A+ G Sbjct: 3 ILVTCGLPYANGPCHLGHLRTYVPADIFVRGLRKMGKEVLFVCGSDSHGTPIVVNAEAQG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T K + ++F ++ ++I +D F T + H+ + + + + + G +Y Sbjct: 63 MTPKALSIKYHQHFDEIFQGMEIDFDFFGDTDDPACHNRTKEMVEALMENGYVYPREIDL 122 Query: 127 WYSLRDEAYYND----------------DEVYKGAD-----GQYYNA----QHNPVQWME 161 Y + E + D DE G G+ NA ++ + Sbjct: 123 AYCPKCERFLPDRYVEGECPYCGKPARGDECDMGCGRHLEPGEIKNAICKVCGGRAEYRK 182 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 + YFFRLS ++D LL + ++ RN +V+S LKD ++R WG++ P Sbjct: 183 QTHYFFRLSGFRDFLLEHLQT---LGGTASARNYATEWVRSELKDWCITR-NMAWGVRFP 238 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FW--PADL-HVIGKDILRFHAIYWPA 277 ++YVW+DA Y+ T G + +W P+ + H IG DI+ H I+WPA Sbjct: 239 GSDDLVVYVWVDAPIGYIAFTEEWCARSGRDWEDYWKKPSQIIHFIGGDIVYHHCIFWPA 298 Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIAC 335 L A LP V + G + +K SKS GNVI + + G+ D LRY+L A Sbjct: 299 MLKGAGYTLPSAVVASGMLKIDDKKFSKSRGNVIWVKDDYMDRGLHPDLLRYYLASYTAH 358 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 K+ + + +VN++L GN ++R+++ +K+++G +P + D +L+ Sbjct: 359 NKEVNFAWNIFADKVNSELVGAFGNFINRALTFSVKNFEGKVPE----GKIDADVLARIE 414 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 + E+ ++ +A V++L + YF + +PW+L K++ D A +VL +++ Sbjct: 415 ETMAEVVSGLEEYEFKKATDSVMTLADYGNTYFQSHEPWKLVKSDKDAAGSVLRSCLQIA 474 Query: 456 RQLAILLQAFVP-KLAN 471 + L IL++ +P K+ N Sbjct: 475 KALVILMEPVMPAKMQN 491 >gi|304397467|ref|ZP_07379345.1| methionyl-tRNA synthetase [Pantoea sp. aB] gi|304355085|gb|EFM19454.1| methionyl-tRNA synthetase [Pantoea sp. aB] Length = 677 Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 130/505 (25%), Positives = 233/505 (46%), Gaps = 46/505 (9%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I AD+ R+ R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65 Query: 65 AGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ ++ + S + D A ++SYD++ T + + +++ ++ + G I Sbjct: 66 LGIAPEQMIAEMKSEHEADFAG-FNVSYDNYHSTHGDENRELSALIYGRLKENGFIKNRT 124 Query: 124 YSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME---------- 161 S Y ++ + D KG + + +A ++P + ++ Sbjct: 125 ISQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCSATYSPTELIDPKSVVSGATP 183 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 E +FF L ++ L ++ S L + N++ + +SGL+ +SR +G Sbjct: 184 VLRDSEHFFFDLPSFSAMLQAWTRSGA---LQDQVANKMQEWFESGLQQWDISRDAPYFG 240 Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRF 270 +IPD P YVW+DA Y+ + L + G +FW D H IGKDI+ F Sbjct: 241 FEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDIDFDEFWRKDSTTELYHFIGKDIVYF 300 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L +N P +F HG++ G K+SKS G I ++ + D+LRY+ Sbjct: 301 HSLFWPAMLEGSNFRKPNNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYA 360 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVNAD+ N + NL SR+ I K +DG + A +D + Sbjct: 361 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFDGKL----AAELADPA 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + ++I + + RA+ ++++L +RY D Q PW + K A + Sbjct: 417 LYQTFVDASEKIGDAWAAREYSRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 476 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L+ + Sbjct: 477 CSMGINLFRILMTWLKPVLPSLSAR 501 >gi|253998809|ref|YP_003050872.1| methionyl-tRNA synthetase [Methylovorus sp. SIP3-4] gi|253985488|gb|ACT50345.1| methionyl-tRNA synthetase [Methylovorus sp. SIP3-4] Length = 678 Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 137/512 (26%), Positives = 235/512 (45%), Gaps = 47/512 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ RF ++ G V + D HG I A+ Sbjct: 7 KILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGHTVHYVCADDTHGTPIMLRAEKE 66 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + ++ ++ D + L + +D++ T + + ++ ++ G I Sbjct: 67 GITPEQLIAKVHTEHYADFSGFL-VEFDNYYSTNAPENRELASNIYLELKKNGKIATKTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWM------------ 160 ++ + + D KG A QY ++ ++P + + Sbjct: 126 EQFFDPVKQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYSPTELINPYSAVSGAAPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E YFF+LS + L + S L E N++ + SGL D +SR +G Sbjct: 185 RKETEHYFFKLSECGEFLQQWTRSG---TLQAEAANKMGEWFASGLSDWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHA 272 +IPD P YVW+DA Y+ + L + G ++W AD H IGKDIL FHA Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMASFKNLCSRLGLDFDEYWKADSKTELYHFIGKDILYFHA 301 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-GVDALRYFLVR 331 ++WPA L + P ++F+HGF+ GEK+SKS G I ++ V + LRY+ Sbjct: 302 LFWPATLKYSGHRQPTQIFAHGFLTVNGEKMSKSRGTFITAGSYLQHVKNPEYLRYYYAA 361 Query: 332 EI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ +D + D RVN+DL N+ SR+ I K +DG + +D ++ Sbjct: 362 KLNGSMEDIDLNLDDFTARVNSDLVGKYINIASRTAGFISKRFDGKLA-----ALADNAV 416 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448 ++ + I E + RAL ++++L + + Y PW++ K A V Sbjct: 417 ITELRQAASSIAECYNTRDYGRALREIMALADKANGYVAEHAPWDMAKQAGREAELHQVC 476 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +E+ R L + L+ +PKLA +I L +A Sbjct: 477 TAALEMFRLLTLYLKPVLPKLAGQIEAFLNIA 508 >gi|290473994|ref|YP_003466868.1| methionine tRNA synthetase [Xenorhabdus bovienii SS-2004] gi|289173301|emb|CBJ80076.1| methionine tRNA synthetase [Xenorhabdus bovienii SS-2004] Length = 675 Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 132/503 (26%), Positives = 231/503 (45%), Gaps = 44/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+HR+ G +V F D HG I AQ + Sbjct: 7 KLLVTCALPYANGPIHLGHILEHIQADIWVRYHRMRGKEVHFICADDAHGTPIMLKAQQS 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G++ + + + S + ISYD++ T + + + ++ K+ G I S Sbjct: 67 GISPEEMIAKVSLEHQQDFAGFAISYDNYHSTHSEENKELASQIYLKLKKNGYIKSRKIS 126 Query: 126 GWYSLRDEAYYNDDEVYKGA------DGQY------YNAQHNPVQWM------------- 160 Y ++ + D KGA + QY ++P + + Sbjct: 127 QLYD-PEKGMFLPDRFVKGACPKCKAEDQYGDNCEVCGTTYSPTELINPRSAVSGATPEM 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + E +FF L + D L + S L + N++ + +GL+ ++R +G + Sbjct: 186 RDTEHFFFDLPVFSDMLQKWTRSGS---LQEQVANKMQEWFDAGLQQWDITRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272 IPD+P YVW+DA Y+ + L + D + +FW D H IGKDI+ FH+ Sbjct: 243 IPDEPGKFFYVWLDAPIGYMGSFQNLCSKRDDLNFDEFWSKDSEADLYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L +N P +F HG+I G K+SKS G I ++ + D LRY+ + Sbjct: 303 LFWPAMLEGSNYRKPTNLFVHGYITVNGTKMSKSRGTFIKAETYLKHLDADCLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 ++ D + + +RVN+D+ N + NL SR+ I K + G + A +D ++ Sbjct: 363 LSSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFINKRFAGKL----ADQLADPALY 418 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + I E+ ++ +A+ ++++L +RY D Q PW + K A + Sbjct: 419 QQFVDAAEGIAEDFTHREFSKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICS 478 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L ++ Sbjct: 479 MGINLFRVLMTYLKPVLPSLTDR 501 >gi|206970493|ref|ZP_03231446.1| putative methionyl-tRNA synthetase [Bacillus cereus AH1134] gi|206735070|gb|EDZ52239.1| putative methionyl-tRNA synthetase [Bacillus cereus AH1134] Length = 544 Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 133/514 (25%), Positives = 239/514 (46%), Gaps = 47/514 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K D+ F+ L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218 E ++F L +Q K+ E E R+ I +VK GL+D ++SR G+ Sbjct: 183 EHFYFALHTFQQKIKKVVEIAKE---KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGV 238 Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRF 270 IP +D + +YVWI+A+T Y + + + G +FW ++ +V GKD + F Sbjct: 239 PIPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPF 296 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 H++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 297 HSVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFL 356 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +D + N++L GN V+R++ I K Y G++P E + Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDK 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 + + RV + I + AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 417 VGGLYKRVGEAIEQTK----FKVALETIFDTVRFANKYFDEKQPWKQREDDPVSCEETIY 472 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V +I A LL+ F+P + ++ + L + + N Sbjct: 473 NCVYLIANFAHLLEPFLPFSSERVRNTLSIVNRN 506 >gi|114563417|ref|YP_750930.1| methionyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] gi|122299549|sp|Q081H3|SYM_SHEFN RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|114334710|gb|ABI72092.1| methionyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] Length = 683 Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 145/543 (26%), Positives = 242/543 (44%), Gaps = 59/543 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K + K+ +++A+ Y N H+GH E I D+ +RF +L G + + D HG I Sbjct: 3 KSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLK 62 Query: 62 AQNAGVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ G+T + + Q + +D AD +I +D+F T + + ++ K+ D G I Sbjct: 63 AQQMGITPEEMIAQVQKEHQQDFAD-FNIQFDNFHSTHSEENRILASDIYLKLRDGGYIK 121 Query: 121 KGCYSGWY------------------SLRDEAYYNDDEVYKGA--------DGQYYNAQH 154 S Y + E Y D+ GA + + + Sbjct: 122 TKTISQLYDPEKLMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYSTTDLINPKSAVSGA 181 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 P+ + E +FF L A++ L + +S L E N++ + + GLK +SR Sbjct: 182 TPIM-KDTEHFFFDLPAFEGMLKEWIQSGS---LQQEMANKLNEWFEQGLKQWDISRDAP 237 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDI 267 +G +IPD P YVW+DA Y+ + L + D + FW D H IGKDI Sbjct: 238 YFGFEIPDAPGKFFYVWLDAPIGYMGSFKNLCDKRDDLNFDDFWSLDSTAEVYHFIGKDI 297 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FH+++WPA L A + P V++HG++ G K+SKS G I ++ + + LRY Sbjct: 298 VYFHSLFWPAMLEGAGIRKPTSVYAHGYVTVNGSKMSKSKGTFIKARTYLDNLDPEYLRY 357 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ D + + +RVN+DL + NL SR+ I K +DG + + + Sbjct: 358 YYAAKLNSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLAKVTDSSLT 417 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRA 444 D I S V+ E+ E + +A+ ++++L + Y PW+L K + D A Sbjct: 418 D--IFLAKSEVIAELYETRE---FGKAMREIMALADIANAYVADAAPWQLVKQDDKQDEA 472 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL------------FVADENRCFQSLDQR 492 V + + R L L+ +PKLA + L E F++L QR Sbjct: 473 HQVCSNALNLFRILVTYLKPVLPKLAENVEGFLQLTLTWDNLGQDLAGHEIATFKALMQR 532 Query: 493 LKP 495 ++P Sbjct: 533 IEP 535 >gi|197336022|ref|YP_002156576.1| methionyl-tRNA synthetase [Vibrio fischeri MJ11] gi|226710937|sp|B5FG53|SYM_VIBFM RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|197317512|gb|ACH66959.1| methionyl-tRNA synthetase [Vibrio fischeri MJ11] Length = 686 Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 148/541 (27%), Positives = 234/541 (43%), Gaps = 62/541 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ R+ RL G DV F D HG I AQ Sbjct: 7 KILVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNDVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G++ + + S + DIS+D++ T + + ++ ++ G I S Sbjct: 67 GISPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFITSRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN---------------------PVQ 158 + E + D V KG A+ QY + N PV Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKAEEQYGDNCDNCGETYSPTDLINPKSAVSGATPVM 185 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + +SGL+ +SR +G Sbjct: 186 -KDSEHFFFDLPQFESMLKEWTRSGS---LQTETANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L N D + ++W D H IGKDI+ FH Sbjct: 242 EIPGETNKFFYVWLDAPIGYMGSFKNLCNKRDDLNFDEYWKKDSTTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L A P VF HG++ G K+SKS G I + + + LRY+ Sbjct: 302 SLFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLNHLDPECLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVN+D+ N I NL SR+ I K +DG + A E Sbjct: 362 KLNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFITKRFDGKLADNFAEPELYNEF 421 Query: 391 LSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446 ++ R+ L E RE RA+ ++ +L + ++Y D + PW L K Sbjct: 422 IAAADRIAELYETRE------FGRAIREITALADKANQYIDEKAPWVLAKEEGKEQELQE 475 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL------------FVADENRCFQSLDQRLK 494 V V + + R L L+ +P+LA + L VA E F++L R+ Sbjct: 476 VSSVGINLFRVLMAYLKPVMPELAARTEAFLNETLTWEGVAQPLVAHEITKFKALFARID 535 Query: 495 P 495 P Sbjct: 536 P 536 >gi|149918382|ref|ZP_01906873.1| methionyl-tRNA synthetase [Plesiocystis pacifica SIR-1] gi|149820908|gb|EDM80317.1| methionyl-tRNA synthetase [Plesiocystis pacifica SIR-1] Length = 600 Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 139/513 (27%), Positives = 225/513 (43%), Gaps = 44/513 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I DV R ++ G V+F +D HG + A+ Sbjct: 3 KKVLVTAALPYANGSIHLGHMLEAIQTDVYVRARKMGGERVVFMWASDTHGTPVQVRARK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + D I YD F T + + +++ + +GDI Sbjct: 63 EGIEPEALIAKAYEEHVAAYDGFGIGYDIFHTTHSDENREHAGAIFEALRARGDIEVREV 122 Query: 125 SGWYSLRDEAYYNDD------EVYKGADGQY------YNAQHNPVQWME----------- 161 YS D+ + D V K D QY A + P + ++ Sbjct: 123 EQLYSEVDQMFLPDRLVKGTCPVCKTPD-QYGDSCDNCGATYRPTELIDPYSSVSGDKPV 181 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPE---FILPIERRNEVISFVKSGLKDLSLSRKTFD 215 E F LS +++ L + + E +L R V+ +V GL+D +SR+ Sbjct: 182 LRTSEHLFVPLSRHEEFLREWLKPVSEGGSTVLQDSVRRFVMDWVDKGLRDWDISREAPY 241 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD--------LHVIGK 265 +GI+IP P YVW DA Y+ T D S +W A +HVIGK Sbjct: 242 FGIEIPGFPGKYFYVWFDAPIGYIAATDKWCQGKDDESVEGWWKAGAGEDGTEIVHVIGK 301 Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 DI+ FH ++WPA L ++ +P +V +HG++ GEK+SKS G I +E V L Sbjct: 302 DIVYFHCLFWPAMLNASGYTVPSRVHAHGWLKVNGEKMSKSRGTFILANTYLEHVDPAYL 361 Query: 326 RYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 RY+L + +D F + RVNADL N NL SRS+ + G T G T Sbjct: 362 RYYLAARLGNNQDDFDLAMEDFVNRVNADLVNKAANLASRSIKFLHAKLGG---TTGPLT 418 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 E ++++ + + AL I + + YF Q+PW+ K++P+ A Sbjct: 419 EEGQALVDDARATFAAVPGLYADFDSAAALRVAIEMAEACNNYFSEQEPWKKVKSDPEAA 478 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V+ V+V + + +L+ +P+ K+ +L Sbjct: 479 RAVVSAGVQVSKLIGAILKPVLPEWGAKVERML 511 >gi|330997427|ref|ZP_08321278.1| methionine--tRNA ligase [Paraprevotella xylaniphila YIT 11841] gi|329570801|gb|EGG52517.1| methionine--tRNA ligase [Paraprevotella xylaniphila YIT 11841] Length = 679 Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 148/517 (28%), Positives = 244/517 (47%), Gaps = 51/517 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + +D + IS+D + RTT + H +T ++ + DKG+ Sbjct: 63 RAKKEGITPQDVVDRYHKIIKDSFEEFGISFDVYGRTTSEVHCETASEFFRTLYDKGEFV 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + D + + A+G Y + + Sbjct: 123 EKTSMQYYDEEAHTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKS----GLKDLSL 209 PV E + ++ L ++ L + E H E+ RN V KS GL+ ++ Sbjct: 183 KPVM-RETKHWYLPLDKHEAWLRQWILEDHKEW------RNNVYGQCKSWLDMGLQPRAV 235 Query: 210 SRKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVI 263 SR DWGI +P + ++YVW DA Y++ T L PD S K+W +H I Sbjct: 236 SRD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLVHFI 292 Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320 GKD + FH I +PA L + + LP V S+ F+ +G+KIS S + E + + Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLRDFPG 352 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D LRY L KD + + R N +L GN V+R++ + K YDG++P Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTQKYYDGVVPAC 412 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 G TE D L V ++ E + A + ++L ++Y +PW++ KT+ Sbjct: 413 GELTEYDRQTLDEFKDVKAKVEELLDAFKFRDAQKEAMNLARIGNKYIADSEPWKVVKTD 472 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P+R TV+Y+++++ LAI + F+P + K+ +L Sbjct: 473 PERVKTVIYISLQLTANLAIAFEPFLPFSSEKLRKML 509 >gi|288916473|ref|ZP_06410850.1| methionyl-tRNA synthetase [Frankia sp. EUN1f] gi|288352073|gb|EFC86273.1| methionyl-tRNA synthetase [Frankia sp. EUN1f] Length = 562 Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 144/514 (28%), Positives = 234/514 (45%), Gaps = 48/514 (9%) Query: 7 LYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N QPH+GH A + AD+ AR+ R+ G VL +G+D HG I A Sbjct: 17 VLVAVAWPYANGQPHLGHIAGAYLPADIFARYQRMIGNRVLMVSGSDAHGTPITVRADEE 76 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT + VD+ F + L IS+D F T H + ++ ++ + G IY S Sbjct: 77 GVTPQAIVDRYHPEFLRIWSDLAISFDLFTTTRTHNHEVVAQSVFTRLREAGYIYPKETS 136 Query: 126 GWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH---------------NPVQWME 161 ++ + D V Y A G Q N V M Sbjct: 137 QFFDPDAGRFLPDRYVVGTCPHCSYTQARGDQCENCGRTLDPELLVDPRSKVTGAVPEMR 196 Query: 162 EEGYFF-RLSAYQDKLLSYYESHPEFILPIERR---NEVISFVKSGLKDLSLSRKTFDWG 217 + +FF RLS D+LL + ++ + RR N + FVK GL D +++R DWG Sbjct: 197 QTTHFFLRLSGLSDQLLDWLQTRQGW-----RRHVLNWSVQFVKDGLHDRAITRD-LDWG 250 Query: 218 IKIPDD---PQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIGKD 266 + +P D P +YVW +A+ YL+ + +P+ +A +W A + +GKD Sbjct: 251 VPLPTDELGPGKRLYVWFEAVIGYLSASKEWAAGTGDPEAWRA-WWEDPEAAAYYFVGKD 309 Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 + FH + WPA LL L LP V ++ ++ G K SKS G E ++ + DAL Sbjct: 310 NIPFHTVIWPAMLLGHGGLDLPTDVPANQYVTFGGAKASKSAGIGRGVREYLDLLQPDAL 369 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 R+ L + D + +RVN +L GNLV+R ++ I K + G +P G Sbjct: 370 RFALASVLPEQNDTEISDADIVRRVNDELIANWGNLVNRVMAQINKFFGGALPETGDLDG 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 +L+ L + E ++ + AL + + +EV+ Y ++PW+ K + A+ Sbjct: 430 VHAELLASVDAGLVRVGELLERVELRAALRAAMEISAEVNAYLYREEPWKTVKVDKATAA 489 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 L V V+ I + L F+P + ++ ++L + Sbjct: 490 HSLAVAVQAISGITTALAPFLPFSSARVAEVLGI 523 >gi|167854961|ref|ZP_02477736.1| methionyl-tRNA synthetase [Haemophilus parasuis 29755] gi|167853918|gb|EDS25157.1| methionyl-tRNA synthetase [Haemophilus parasuis 29755] Length = 684 Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 130/505 (25%), Positives = 242/505 (47%), Gaps = 45/505 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I A Sbjct: 5 KRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLNAD 64 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+T + +++ + + D A +IS+D++ T + + + ++KK+ G I Sbjct: 65 KLGITPEQLIEKAKADHIADFAG-FNISFDNYHSTHSEENREYTSAIYKKLKANGFIKSK 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM---------- 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 124 VISQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSVVSGST 182 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + E +FF L ++++ L ++ S L E N++ + +SGL+ +SR + Sbjct: 183 PVVKQSEHFFFDLPSFEEMLKAWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRF 270 G +IPD YVW+DA Y+ + L + G FW + H IGKDI+ F Sbjct: 240 GFEIPDSENKFFYVWLDAPIGYMASFKNLCDRTGLNFDDFWKKESDAELYHFIGKDIVYF 299 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L + P VF+HG++ G+K+SKS G I ++ + + LRY+ Sbjct: 300 HSLFWPAMLEGSEYRKPTNVFAHGYVTVDGQKMSKSRGTFIQASTYLKHIDPECLRYYYA 359 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 ++ +D ++ + +RVN+D+ N + NL SR+ I K ++G + A T +++ Sbjct: 360 AKLNDRIEDLDFNLEDFVQRVNSDIVNKLVNLASRTAGFITKRFEGKL----ASTLENQA 415 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447 + ++I + + ++A+ ++++L + ++Y D + PW + K A V Sbjct: 416 LFDEFVAQSEQIATYFETREYNKAIREIMALTDKANKYIDDKAPWVIAKEEGKDAELQAV 475 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +PKLA + Sbjct: 476 CSMGLELFRVLMSYLKPVLPKLAER 500 >gi|229076419|ref|ZP_04209383.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-18] gi|228706706|gb|EEL58915.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-18] Length = 544 Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 132/514 (25%), Positives = 239/514 (46%), Gaps = 47/514 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K D+ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218 E ++F L +Q+++ E + R+ I +VK GL+D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKGVVEIAKQ---KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPVGV 238 Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADL---HVIGKDILRF 270 IP +D + +YVWI+A+T Y + + + G +FW + +V GKD + F Sbjct: 239 PIPVAGYEDKK--IYVWIEAVTGYYSASKHWAEKTGKDDQEFWDKETKTYYVHGKDNIPF 296 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 H+I WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 297 HSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWIPDILESYDPDSIRYFL 356 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +D + N++L GN V+R++ I K YDG++P E + Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGVVPKGTIHVELKDK 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 + + +E+ ++ AL + V ++YFD ++PW+ ++ NP +Y Sbjct: 417 V----EGLYKEVGAAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDNPVSCEETIY 472 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V +I A LL+ F+P + ++ + L + + N Sbjct: 473 NCVYLIANFANLLEPFLPFSSERVRNTLSIVNRN 506 >gi|167044646|gb|ABZ09318.1| putative tRNA synthetases class I (I, L, M and V) [uncultured marine crenarchaeote HF4000_APKG7F19] Length = 551 Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 145/542 (26%), Positives = 256/542 (47%), Gaps = 49/542 (9%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K I++A+ Y N + HIGH A + ADV RF + G++ + +D+ G I ++ Sbjct: 4 KAIITSALPYANGEIHIGHVASTYLPADVTTRFLKQKGVEAYYICASDDFGTPILIQSEK 63 Query: 65 AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + +V+ N R+F D +I +D F +T+ + + ++KK+ G IY+ Sbjct: 64 EGKTPEEYVEYWNKRDFEDFV-AFNIKFDFFYKTSSPENRQFVQDVFKKLEQAGHIYQNE 122 Query: 124 YSGWYSLRDEAYYNDDEV-----YKGADGQYYN-------------------AQHNPVQW 159 Y D+ + D V Y AD QY + PV+ Sbjct: 123 IIQLYCNTDKKFLPDRYVVGTCPYCKADEQYSDLCEKCGRVPEEIENPHCSICGQTPVK- 181 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + + YFF+L + DK+ Y + L + + V +++K GL D ++R WGI Sbjct: 182 KKTKHYFFKLKNFSDKISQYLNDNKN--LQKDVKKYVQNWIKDGLTDWDITR-DISWGIP 238 Query: 220 IPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FW-PADL-HVIGKDILRFHAIY 274 IPD Q + Y W D Y+++T N +G K FW +D+ H IGKDI+ H ++ Sbjct: 239 IPDGGANQKVFYGWFDNHLAYISSTIKFLNGNGKDGKKFWNESDIYHFIGKDIVYHHYLF 298 Query: 275 WPAFLLS--ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 PA L LP + + G + + +KISKS I + + D LR++L+ Sbjct: 299 LPAIRLGIEEEYKLPDYIPTRGHLTLQSKKISKSRNWYIGLKDFLAIFPADYLRFYLISI 358 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 +D ++ ++N++L +GNLV+R++ +K ++G +P P F + D Sbjct: 359 NPYSQDDLNFNWGEFATKINSELIGNLGNLVNRALGFTVKSFNGAVPGPDEFDDIDNESK 418 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451 + + ++ + M+ + RAL +++ + ++YF ++PW+ N +T ++++ Sbjct: 419 KMINELVSHLGILMEENHLDRALKKILQFSAHFNQYFQHKEPWK----NGPGTNTCVFLS 474 Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ----RLKPGFMLHKTFDPIF 507 V IR LAI + F+P+ + KI+ + D N Q D+ LK G L + P+F Sbjct: 475 VNAIRSLAIAVYPFLPESSQKIW-LQLGLDGNVSAQMFDEISNITLKQGHKL-GSVSPLF 532 Query: 508 PR 509 + Sbjct: 533 EK 534 >gi|75760133|ref|ZP_00740193.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228903536|ref|ZP_04067659.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222] gi|74492370|gb|EAO55526.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228856112|gb|EEN00649.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222] Length = 544 Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 132/514 (25%), Positives = 238/514 (46%), Gaps = 47/514 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F+ L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCKTCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKTCKLCGSTPSVEET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218 E ++F L +Q ++ E E R+ I +VK GL+D ++SR G+ Sbjct: 183 EHFYFALHTFQQQIKKVVEIAKE---KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGV 238 Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRF 270 IP +D + +YVWI+A+ Y + + Y G +FW +D +V GKD + F Sbjct: 239 PIPVKGYEDKK--IYVWIEAVAGYYSASKYWAEETGKDDHEFWNSDAQTYYVHGKDNIPF 296 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 H+I WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 297 HSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFL 356 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +D + N++L GN V+R++ I K YDG++P E + Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPQGTINVELKDK 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 + + + + E ++ AL + V ++YFD ++PW+ ++ NP +Y Sbjct: 417 V----EGLYKNVGEAIEQTTFKVALETIFDAVRFANKYFDERQPWKEREDNPVSCEETIY 472 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 + +I A LL+ F+P + ++ L + + N Sbjct: 473 NCIYLIANFANLLEPFLPFSSERVRSTLSIVNRN 506 >gi|152979488|ref|YP_001345117.1| methionyl-tRNA synthetase [Actinobacillus succinogenes 130Z] gi|187645703|sp|A6VQD5|SYM_ACTSZ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|150841211|gb|ABR75182.1| methionyl-tRNA synthetase [Actinobacillus succinogenes 130Z] Length = 685 Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 131/507 (25%), Positives = 234/507 (46%), Gaps = 45/507 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K ++ ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I Sbjct: 3 KANRQILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGHEIYFVCADDAHGTPIMLK 62 Query: 62 AQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A G+ ++ D ++ D +IS+D++ T + + + +++ ++ + G I Sbjct: 63 ADQMGIAPEQLIADVQKSHYADFCG-FNISFDNYHSTHSEENREFSEMIYNRLKENGFIK 121 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM-------- 160 S + +++ + D KG A+ QY +A ++P + + Sbjct: 122 TRAISQLFD-PEKSMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPTELIAPRSVVSG 180 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E E +FF L +++ L + S L E N++ + +GL+ +SR Sbjct: 181 ATPIIKESEHFFFDLPSFEAMLKQWNRSGA---LQSEVANKMQEWFDAGLQQWDISRDAP 237 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDIL 268 +G KIP YVW+DA Y+ + L N +FW D H IGKDI+ Sbjct: 238 YFGFKIPGTENKYFYVWLDAPIGYMASFKNLCNRQNIDFDRFWNKDSQAELYHFIGKDIM 297 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH+++WPA L A+L P +F HG++ GEK+SKS G I ++ + + LRY+ Sbjct: 298 YFHSLFWPAMLEGADLRKPSNIFVHGYVTVNGEKMSKSRGTFIQAATYLKHLDPECLRYY 357 Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 +++ D + + +RVN DL N + NL SR+ I K + G + A D Sbjct: 358 YAAKLSNRIDDLDLNLEDFVQRVNTDLVNKLVNLASRNAGFIQKRFAGKL----ADKLDD 413 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--S 445 E++ + +I +N+ +A+ ++++L + ++Y D + PW + K Sbjct: 414 EALFNEFIAQSAQIAAYYENREFGKAVREIMALTDKANKYVDEKAPWVIAKEQGRETELQ 473 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472 V + +++ R L L+ +PKLA + Sbjct: 474 RVCSMGIQLFRVLMGYLKPVLPKLAER 500 >gi|301170011|emb|CBW29615.1| methionyl-tRNA synthetase [Haemophilus influenzae 10810] Length = 682 Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 135/503 (26%), Positives = 238/503 (47%), Gaps = 45/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G + F D HG I A Sbjct: 7 KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + RD A +IS+D++ T + + ++ K+ G I Sbjct: 67 GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A++ L + S L E N++ + +SGL+ +SR +G Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272 +IP YVW+DA Y+ + L +G ++FW A+L H IGKDI+ FH+ Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFSEFWAEGSDAELYHFIGKDIVYFHS 301 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF+HG++ G K+SKS G I + + + LRY+ + Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361 Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + +D ++ D +RVN D+ N + NL SR+ I K ++G + A DE++ Sbjct: 362 LNDRIEDLDFNLDDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDEALF 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + ++I +++ ++A+ ++++L + ++Y D + PW + K A V Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +PKLA + Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500 >gi|237785129|ref|YP_002905834.1| methionyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385] gi|259511557|sp|C4LHI6|SYM_CORK4 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|237758041|gb|ACR17291.1| Methionyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385] Length = 612 Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 153/545 (28%), Positives = 247/545 (45%), Gaps = 71/545 (13%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 I T++A+P N HIGH + +DV AR+ R+ G DVL +GTDEHG + A+ Sbjct: 5 ILTSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMRGRDVLMVSGTDEHGTPLLVQAEKE 64 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ + D N + D+A L +SYD F RTT + H+ + L+ + G + K Sbjct: 65 GVSVQQLADTYNKQIVEDLAG-LGLSYDLFTRTTTRNHYAIVQELFTTLYSNGYMVKQTT 123 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159 G S D + GA G + N + ++ Sbjct: 124 LGAISPSTGRTLPDRYIEGTCPICGAPGARGDQCDTCGNQLDPADLIDSVSKINGETPKF 183 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 +E E + L A D L + ES ++ R V+ F + LKD+ T DWG Sbjct: 184 VETEHFLLDLPALADALGEWLESRQDW------RPNVLKFSLNILKDIKPRAMTRDIDWG 237 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIG 264 + +P D+ +YVW DA+ YL+ + + +PD K K+W + +G Sbjct: 238 VPVPLEGWADNKFKKLYVWFDAVVGYLSASIEWAHRIGDPDAWK-KWWTNPEAKSYYFMG 296 Query: 265 KDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNV 310 KD + FH+ WPA +L +L LP +V S ++ G K S S G V Sbjct: 297 KDNITFHSQIWPAEMLGYRGLGSRGGTEGKLGDLQLPTEVVSSEYLTMSGSKFSSSKGVV 356 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 I + + E G D LRYF+ D + D +R N +LAN GNL++R+VSM Sbjct: 357 IYVQDFLREFGPDPLRYFIAVAGPENNDTDFTWDEFVRRNNNELANSWGNLINRTVSMAA 416 Query: 371 KDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428 K++ G +P T+ D ++L + + + +N+++ + + + +V E + Y Sbjct: 417 KNF-GEVPDISGLELTDDDNALLDLAEKTFDIVADNIEHSRFRAGINEAMHVVGEANAYI 475 Query: 429 DAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 AQ+PW+L K DR + VL+ ++V+ +LL ++P A K+ + L E Sbjct: 476 AAQEPWKLAKDEDQRDRLAVVLHTALQVVSDCNVLLTPYLPHAAQKVHETLGRTGEWAAM 535 Query: 487 QSLDQ 491 +D+ Sbjct: 536 PRIDE 540 >gi|23464786|ref|NP_695389.1| methionyl-tRNA synthetase [Bifidobacterium longum NCC2705] gi|25009342|sp|P59076|SYM_BIFLO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|23325363|gb|AAN24025.1| methionyl-tRNA synthetase [Bifidobacterium longum NCC2705] Length = 621 Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 148/528 (28%), Positives = 246/528 (46%), Gaps = 66/528 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A+ Sbjct: 4 VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ +R +D+ D L +SYD F RTT H + ++K+ + G IYKG Sbjct: 64 GLTAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQ 122 Query: 125 ------SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QW 159 S +L D + + +GA G +A N PV ++ Sbjct: 123 QVAISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 + E YF L A + ++ E+ + R VI+F K++ T DWG Sbjct: 183 EQTEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWG 236 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGK 265 I +P D+P +YVW DA+ YL+ + G K+ W D + +GK Sbjct: 237 IPVPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPACPAYYFMGK 296 Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FH+ WP+ +L+ N L LP++V + F+ +G+K S S G VI Sbjct: 297 DNITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVI 356 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 +++ VDA+RY++ D + + N +LA+ GNLV+R ++I K Sbjct: 357 YVKDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINK 416 Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 ++ G IP + T D +L S + +++ AL++ + +V ++++Y Sbjct: 417 NF-GEIPPLDEDSMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYIS 475 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A +PW++K + R TVL+V + + LL F+P A K+++ L Sbjct: 476 ATEPWKIKD-DQARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEAL 522 >gi|189440393|ref|YP_001955474.1| methionyl-tRNA synthetase [Bifidobacterium longum DJO10A] gi|312133725|ref|YP_004001064.1| metg [Bifidobacterium longum subsp. longum BBMN68] gi|189428828|gb|ACD98976.1| Methyonyl-tRNA synthetase [Bifidobacterium longum DJO10A] gi|311773001|gb|ADQ02489.1| MetG [Bifidobacterium longum subsp. longum BBMN68] Length = 617 Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 148/526 (28%), Positives = 244/526 (46%), Gaps = 66/526 (12%) Query: 9 ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A+ G+ Sbjct: 2 VNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGL 61 Query: 68 TTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY-- 124 T + ++ +R +D+ D L +SYD F RTT H + ++K+ + G IYKG Sbjct: 62 TAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQQV 120 Query: 125 ----SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QWME 161 S +L D + + +GA G +A N PV ++ + Sbjct: 121 AISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFEQ 180 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIK 219 E YF L A + ++ E+ + R VI+F K++ T DWGI Sbjct: 181 TEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWGIP 234 Query: 220 IP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGKDI 267 +P D+P +YVW DA+ YL+ + G K+ W D + +GKD Sbjct: 235 VPVKDWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDN 294 Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 + FH+ WP+ +L+ N L LP++V + F+ +G+K S S G VI Sbjct: 295 ITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYV 354 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +++ VDA+RY++ D + + N +LA+ GNLV+R ++I K++ Sbjct: 355 KDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNF 414 Query: 374 DGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 G IP + T D +L S + +++ AL++ + +V ++++Y A Sbjct: 415 -GEIPPLDEDSMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISAT 473 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +PW++K R TVL+V + + LL F+P A K+++ L Sbjct: 474 EPWKIKDDQA-RLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEAL 518 >gi|329297896|ref|ZP_08255232.1| methionyl-tRNA synthetase [Plautia stali symbiont] Length = 677 Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 127/504 (25%), Positives = 230/504 (45%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +KL ++ A+ Y N H+GH E I ADV R+ R+ G V F D HG I AQ Sbjct: 6 KKLLVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNQVFFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + +ISYD++ T + +++ ++ + G I Sbjct: 66 LGIAPEQMIAEMKQEHETDFAGFNISYDNYHSTHGDENRQLSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ L ++ S L + N++ + ++GL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSAMLQAWTRSGA---LQEQVANKMQEWFEAGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271 +I P +YVW+DA Y+ + L + G +FW + H IGKDI+ FH Sbjct: 242 EILGAPGKYLYVWLDAPIGYMGSFKNLCDKRGDIDFDEFWKKNSSTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L +N P +F HG++ G K+SKS G I ++ + D+LRY+ Sbjct: 302 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K ++G + + A D+++ Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFNGQLASELA----DQAL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 ++I E ++ +RA+ ++++L +RY D Q PW + K A + Sbjct: 418 YQTFVDASEKIGEAWASREYNRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L+ + Sbjct: 478 SMGINLFRVLMTWLKPVLPSLSER 501 >gi|229199184|ref|ZP_04325865.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1293] gi|228584290|gb|EEK42427.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1293] Length = 544 Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 136/540 (25%), Positives = 248/540 (45%), Gaps = 54/540 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K DQ F+ L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETIQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ + E+ + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKTAVENAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADL---HVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G +FW ++ +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGEDDQEFWDSEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + + Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRALKFIEKYYGGIVPKGSIDVELKDKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKQREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V +I A LL+ F+P + +I + L + + N +P L D + P F Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524 >gi|238919212|ref|YP_002932727.1| methionyl-tRNA synthetase [Edwardsiella ictaluri 93-146] gi|238868781|gb|ACR68492.1| methionyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146] Length = 682 Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 134/508 (26%), Positives = 231/508 (45%), Gaps = 54/508 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I ADV R+ R+ G V F D HG I AQ Sbjct: 12 KILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNQVHFICADDAHGTPIMLKAQQM 71 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + S+ +D AD ISYD++ T + +H +++ ++ + G I Sbjct: 72 GIAPEQMIAEVSKEHQQDFAD-FQISYDNYHSTHSEENHQLASLIYTRLKENGFIKNRTI 130 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160 S Y ++ + D KG + + A ++P + + Sbjct: 131 SQLYD-PEKGMFLPDRFVKGTCPKCQSADQYGDNCEVCGATYSPTELINPKSVVSGATPI 189 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L ++ L ++ S L + N++ + +SGL+ ++R +G Sbjct: 190 LRESEHFFFDLPSFGAMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDITRDAPYFGF 246 Query: 219 KIPDDPQYIMYVWIDALTNYLTT-------TGYLDNPD----GSKAKFWPADLHVIGKDI 267 +IPD P YVW+DA Y+ + G L+ D GS A+ + H IGKDI Sbjct: 247 EIPDAPGKYFYVWLDAPIGYMGSFRNLCDKRGDLNFDDYWGQGSDAELY----HFIGKDI 302 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FH+++WPA L + P VF HG++ G K+SKS G I + + D LRY Sbjct: 303 VYFHSLFWPAMLEGSGFRKPSNVFVHGYVTVNGAKMSKSRGTFIQARTYLNHLDPDCLRY 362 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + +++ D + + +RVNAD+ N + NL SR+ I K + G + T + Sbjct: 363 YYTAKLSDRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFAGQLSD----TLA 418 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-- 444 D ++ EI + + + +A+ ++++L +RY D Q PW + K A Sbjct: 419 DPALYQTFVDAAAEIAKAYEARESGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADL 478 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANK 472 + + + + R L L+ +P L+ + Sbjct: 479 QAICSMGLNLFRVLMTYLKPVLPALSAR 506 >gi|227546913|ref|ZP_03976962.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212593|gb|EEI80481.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 621 Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 148/528 (28%), Positives = 245/528 (46%), Gaps = 66/528 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A+ Sbjct: 4 VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ +R +D+ D L +SYD F RTT H + ++K+ + G IYKG Sbjct: 64 GLTAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQ 122 Query: 125 ------SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QW 159 S +L D + + +GA G +A N PV ++ Sbjct: 123 QVAISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 + E YF L A + ++ E+ + R VI+F K++ T DWG Sbjct: 183 EQTEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWG 236 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGK 265 I +P D+P +YVW DA+ YL+ + G K+ W D + +GK Sbjct: 237 IPVPVKDWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGK 296 Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FH+ WP+ +L+ N L LP++V + F+ +G+K S S G VI Sbjct: 297 DNITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVI 356 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 +++ VDA+RY++ D + + N +LA+ GNLV+R ++I K Sbjct: 357 YVKDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINK 416 Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 ++ G IP + T D +L S + +++ AL++ + +V ++++Y Sbjct: 417 NF-GEIPPLDEDSMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYIS 475 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A +PW++K R TVL+V + + LL F+P A K+++ L Sbjct: 476 ATEPWKIKDDQA-RLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEAL 522 >gi|115378722|ref|ZP_01465869.1| hypothetical protein STIAU_7318 [Stigmatella aurantiaca DW4/3-1] gi|115364272|gb|EAU63360.1| hypothetical protein STIAU_7318 [Stigmatella aurantiaca DW4/3-1] Length = 698 Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 144/538 (26%), Positives = 238/538 (44%), Gaps = 49/538 (9%) Query: 13 IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72 + Y N HIGH E + D+ RF R G +V++ D HG I A G+ + F Sbjct: 1 LPYANGPIHIGHVVEYVQTDIYVRFLRSCGKNVVYFCADDTHGTPIELNAAKQGLKPEEF 60 Query: 73 VDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLR 131 V + R D AD DIS D F T + +++ ++ +KGDI + Y + Sbjct: 61 VARCYELHRKDFAD-FDISVDYFHSTHSPENRAYSELIYGRLKEKGDIERRDIEQTYCEK 119 Query: 132 DEAYYNDDEVYKG------ADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDK---L 176 D+ + D KG A QY ++ ++P ++ + + L Sbjct: 120 DKRFL-PDRFIKGTCPNCKAKDQYGDSCEKCGKAYSPTDLIDPHCSLCGTPPVRKRSTHL 178 Query: 177 LSYYESHPEFILPIERR---------NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI 227 H F+ + RR ++ F + GL D +SR +G IP + Sbjct: 179 FFKLSRHEAFLRELLRRPGFLNQGLATQLQGFFEKGLADWDISRDGPYFGFAIPGETDKY 238 Query: 228 MYVWIDALTNYLTTTGYLDNPDG---SKAKFWPAD-----LHVIGKDILRFHAIYWPAFL 279 YVW+DA Y+ TT G S +W D +H IGKDI+ FHA++WPA L Sbjct: 239 FYVWLDAPIGYIATTEKWAQETGKAKSALDYWGPDSNTRIVHFIGKDIVYFHALFWPAVL 298 Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 A+L P +V +HG + GEK+SK+ G +I + ++++ LR+F + G + Sbjct: 299 KVADLHGPDEVKAHGHLTVNGEKMSKTRGTLIPARDYLDKLDPSYLRFFYAACLGSGPED 358 Query: 340 F-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398 F + RVN +L N +GNL +R+++M+ + + PG+ + + +RV Sbjct: 359 FDLSLKDFRLRVNGELVNNVGNLANRALTMLAGPLEKRL-APGSTGAGKALVEAALARV- 416 Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 E+RE + A+ ++ + + + AQ PW KT+ + A L +V+ L Sbjct: 417 PEVREAFEKLEYRNAIKAIVEISQTANAFLQAQAPWAKVKTDAEGARADLSDAADVVYLL 476 Query: 459 AILLQAFVPKLANKIF------DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 LL +P++ +K+F + F A E + LD+ G T +P+ PR Sbjct: 477 GALLAPVIPRVTDKLFAQLGAPPLTFAALETARYPLLDRSRPIG-----TPEPLLPRL 529 >gi|291618086|ref|YP_003520828.1| MetG [Pantoea ananatis LMG 20103] gi|291153116|gb|ADD77700.1| MetG [Pantoea ananatis LMG 20103] Length = 677 Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 127/504 (25%), Positives = 230/504 (45%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I AD+ R+ R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGIAPEQMIAEMKQEHETDFAGFNISYDNYHSTHGDENRELAGLIYGRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + +A ++P + ++ Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCSATYSPTELIDPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 LRDSEHFFFDLPSFSEMLRAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271 +IP P YVW+DA Y+ + L + G + +FW D H IGKDI+ FH Sbjct: 242 EIPGAPGKYFYVWLDAPIGYMGSFKNLCDKRGDINFDEFWQQDSTTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P +F HG++ G K+SKS G I ++ + D+LRY+ Sbjct: 302 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K +DG + A D ++ Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFDGKLSAELA----DPAL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 ++I E ++ RA+ ++++L +RY D Q PW + K A + Sbjct: 418 YQTFLDASEKIGEAWASREFGRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L+ + Sbjct: 478 SMGINLFRVLMTWLKPVMPSLSAR 501 >gi|148827028|ref|YP_001291781.1| methionyl-tRNA synthetase [Haemophilus influenzae PittGG] gi|187647724|sp|A5UF42|SYM_HAEIG RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|148718270|gb|ABQ99397.1| methionyl-tRNA synthetase [Haemophilus influenzae PittGG] Length = 682 Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 136/503 (27%), Positives = 237/503 (47%), Gaps = 45/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G + F D HG I A Sbjct: 7 KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + RD A +IS+D++ T + + ++ K+ G I Sbjct: 67 GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A++ L + S L E N++ + +SGL+ +SR +G Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272 +IP YVW+DA Y+ + L N +G +FW A+L H IGKDI+ FH+ Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF+HG++ G K+SKS G I + + + LRY+ + Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361 Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + +D ++ D +RVN D+ N + NL SR+ I K ++ + A DES+ Sbjct: 362 LNDRIEDLDFNLDDFVQRVNTDIVNKLVNLASRNAGFIAKRFESKL----ADKLEDESLF 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + ++I +++ ++A+ ++++L + ++Y D + PW + K A V Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +PKLA + Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500 >gi|317482648|ref|ZP_07941662.1| tRNA synthetase class I [Bifidobacterium sp. 12_1_47BFAA] gi|316915894|gb|EFV37302.1| tRNA synthetase class I [Bifidobacterium sp. 12_1_47BFAA] Length = 621 Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 148/528 (28%), Positives = 246/528 (46%), Gaps = 66/528 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A+ Sbjct: 4 VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ +R +D+ D L +SYD F RTT H + ++K+ + G IYKG Sbjct: 64 GLTAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQ 122 Query: 125 ------SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QW 159 S +L D + + +GA G +A N PV ++ Sbjct: 123 QVAISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 + E YF L A + ++ E+ + R VI+F K++ T DWG Sbjct: 183 EQTEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWG 236 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGK 265 I +P D+P +YVW DA+ YL+ + G K+ W D + +GK Sbjct: 237 IPVPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGK 296 Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FH+ WP+ +L+ N L LP++V + F+ +G+K S S G VI Sbjct: 297 DNITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVI 356 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 +++ VDA+RY++ D + + N +LA+ GNLV+R ++I K Sbjct: 357 YVKDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINK 416 Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 ++ G IP + T D +L S + +++ AL++ + +V ++++Y Sbjct: 417 NF-GEIPPLDEDSMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYIS 475 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A +PW++K + R TVL+V + + LL F+P A K+++ L Sbjct: 476 ATEPWKIKD-DQARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEAL 522 >gi|229105649|ref|ZP_04236282.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-28] gi|228677785|gb|EEL32029.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-28] Length = 544 Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 139/541 (25%), Positives = 246/541 (45%), Gaps = 56/541 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K D+ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218 E ++F L +Q+++ E + R+ I +VK GL+D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKGVVEIAKQ---KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPVGV 238 Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADL---HVIGKDILRF 270 IP +D + +YVWI+A+T Y + + + G +FW + +V GKD + F Sbjct: 239 PIPVAGYEDKK--IYVWIEAVTGYYSASKHWAEKTGKDDQEFWDKETKTYYVHGKDNIPF 296 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 H+I WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 297 HSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILESYDPDSIRYFL 356 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +D + N++L GN V+R++ I K YDG++P E E Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPNRIINEELKEK 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 I + + E+++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 417 I----EGLYINVGESIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIY 472 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 V +I A LL+ F+P + ++ + L + N +P ML D + P Sbjct: 473 NCVYLIANFANLLEPFLPFSSERVRNTLSIVKRN---------WEPQNMLPNKIDSVQPL 523 Query: 510 F 510 F Sbjct: 524 F 524 >gi|261867564|ref|YP_003255486.1| methionyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412896|gb|ACX82267.1| methionyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 686 Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 131/507 (25%), Positives = 240/507 (47%), Gaps = 48/507 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I A Sbjct: 5 KRKILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLKAD 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+T + +D + + MAD +IS+D++ T + + + +++ ++ + G I Sbjct: 65 QMGITPEQLIDDVRQ--KHMADFAGFNISFDNYHSTHSEENRELSELIYNRLKENGFIKS 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM--------- 160 S Y ++ + D KG + + A ++P + + Sbjct: 123 RTISQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCAATYSPTELISPRSVVSGA 181 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 + E +FF L +++ L ++ S L E N++ + ++GL+ +SR Sbjct: 182 TPVMKDSEHFFFDLPSFEAMLKNWLGSGS---LQSEVVNKMQEWFEAGLQQWDISRDAPY 238 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP------DGSKAKFWPADL-HVIGKDIL 268 +G +IP++ YVW+DA Y+ + L DG K A+L H IGKDI+ Sbjct: 239 FGFQIPNEEGKYFYVWLDAPIGYMASFKNLCKRESHIDFDGLWRKDSDAELYHFIGKDIM 298 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH+++WPA L A+ P +F HG++ GEK+SKS G I ++ + + LRY+ Sbjct: 299 YFHSLFWPAMLEGADFRKPSNIFVHGYVTVNGEKMSKSRGTFIQAATYLKYLDPECLRYY 358 Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 +++ D + + +RVN DL N + NL SR+ I K +DG + A + D Sbjct: 359 YAAKLSNRIDDLDLNLEDFVQRVNTDLVNKLVNLASRNAGFIQKRFDGKL----AASLDD 414 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--S 445 +++ ++I +N+ +A+ ++++L + ++Y D + PW + K A Sbjct: 415 QALFDEFIAQSEQIAAYYENREFGKAIREIMALTDKANKYIDDKVPWVIAKEAGKDAELQ 474 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472 V + +++ R L L+ +PKLA + Sbjct: 475 AVCSMGIQLFRVLMGYLKPVLPKLAER 501 >gi|213693272|ref|YP_002323858.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254782853|sp|B7GP85|SYM_BIFLI RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|213524733|gb|ACJ53480.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 621 Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 148/528 (28%), Positives = 245/528 (46%), Gaps = 66/528 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A+ Sbjct: 4 VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ +R +D+ D L +SYD F RTT H + ++K+ + G IYKG Sbjct: 64 GLTAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGSQ 122 Query: 125 ------SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QW 159 S +L D + + +GA G +A N PV ++ Sbjct: 123 QVAISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 + E YF L A + ++ E+ + R VI+F K++ T DWG Sbjct: 183 EQTEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWG 236 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGK 265 I +P D+P +YVW DA+ YL+ + G K+ W D + +GK Sbjct: 237 IPVPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPKCPAYYFMGK 296 Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FH+ WP+ +L+ N L LP++V + F+ +G+K S S G VI Sbjct: 297 DNITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVI 356 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 +++ VDA+RY++ D + + N +LA+ GNLV+R ++I K Sbjct: 357 YVKDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINK 416 Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 ++ G IP + T D +L S + +++ AL++ + +V ++++Y Sbjct: 417 NF-GEIPPLDEDSMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYIS 475 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A +PW++K R TVL+V + + LL F+P A K+++ L Sbjct: 476 ATEPWKIKDDQA-RLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEAL 522 >gi|327394485|dbj|BAK11907.1| methionyl-tRNA synthetase MetG [Pantoea ananatis AJ13355] Length = 677 Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 127/504 (25%), Positives = 230/504 (45%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I AD+ R+ R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGIAPEQMIAEMKQEHETDFAGFNISYDNYHSTHGDENRELAGLIYGRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + +A ++P + ++ Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCSATYSPTELIDPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 LRDSEHFFFDLPSFSEMLRAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271 +IP P YVW+DA Y+ + L + G + +FW D H IGKDI+ FH Sbjct: 242 EIPGAPGKYFYVWLDAPIGYMGSFKNLCDKRGDINFDEFWQQDSTTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P +F HG++ G K+SKS G I ++ + D+LRY+ Sbjct: 302 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K +DG + A D ++ Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFDGKLSAELA----DPAL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 ++I E ++ RA+ ++++L +RY D Q PW + K A + Sbjct: 418 YQTFLDASEKIGEAWASREFGRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L+ + Sbjct: 478 SMGINLFRVLMTWLKPVMPSLSAR 501 >gi|228470762|ref|ZP_04055611.1| methionyl-tRNA synthetase [Porphyromonas uenonis 60-3] gi|228307526|gb|EEK16528.1| methionyl-tRNA synthetase [Porphyromonas uenonis 60-3] Length = 683 Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 143/519 (27%), Positives = 246/519 (47%), Gaps = 43/519 (8%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++TA+ Y N HIGH A + AD+ R+ R+ G +VLF G+DEHG IA A+ Sbjct: 7 KRTLVTTALPYANGPVHIGHLAGVYVPADIYVRYKRMKGDEVLFIGGSDEHGVPIAIKAK 66 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ + VD+ ++ L I +D + RTT + H T + K+ + G + + Sbjct: 67 AEGVSPQEVVDRYHALIKESFARLGIDFDIYSRTTSETHEKTASAFFTKLYESGKLIEQT 126 Query: 124 YSGWYSLRDEAYYND-----------DEVYKG----ADGQYYNAQ-----HNPV-----Q 158 +Y + + D +E G A G +A H+ + + Sbjct: 127 SEQYYDPEAKQFLADRYITGTCPHCHNERAYGDQCEACGTSLSATDLIDPHSAISGAKPE 186 Query: 159 WMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 E + ++ L Y+ L + E H E+ + + S++ GL+ +++R DWG Sbjct: 187 LRETKHWYLPLGDYESFLREWILEGHKEWKPNV--YGQCKSWLDLGLQPRAVTRD-LDWG 243 Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270 I +P ++YVW DA Y++ T L PD + W D +H IGKD + F Sbjct: 244 IPVPLQGAEGKVLYVWFDAPIGYISNTKEL-LPDSWRT--WWCDPETRLIHFIGKDNIVF 300 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327 H I +PA L + + LP V ++ F+ +G+KIS S I E ++E+ D LRY Sbjct: 301 HCIIFPAMLKAEGSFNLPDNVPANEFLNLEGDKISTSRNWAIWLHEYLDEMPGKEDVLRY 360 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L KD + + R N +L GN V+R++ + K +DG +P G TE D Sbjct: 361 VLTANAPETKDNDFTWRDYQARNNNELVAIYGNFVNRALVLTHKYFDGKVPPLGRLTEID 420 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 E +L + + E+ + +++ AL + L ++Y +PW++ K++PDR +T+ Sbjct: 421 EEMLREVAAIPAELDDQLEHFHFREALKTAMQLARIGNKYLADTEPWKVIKSDPDRVATI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 L++ ++++ L I F P ++ +L V +E F Sbjct: 481 LHLALQLVGNLTIAFAPFTPFSTRRLLAMLQVGEEGFAF 519 >gi|189346708|ref|YP_001943237.1| methionyl-tRNA synthetase [Chlorobium limicola DSM 245] gi|226710900|sp|B3ECI3|SYM_CHLL2 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|189340855|gb|ACD90258.1| methionyl-tRNA synthetase [Chlorobium limicola DSM 245] Length = 702 Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 140/545 (25%), Positives = 255/545 (46%), Gaps = 63/545 (11%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M+ + ++TA+ Y N H+GH A + AD+ R+ R+ G DV+ G+DEHG I Sbjct: 1 MQHVTRTLVTTALPYANGPVHLGHLAGVYLPADIYVRYKRMKGEDVIHIGGSDEHGVPIT 60 Query: 60 KAAQNAGVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD 115 A+ G++ + VD+ NS FR IS+D + RT+ + HHDT + + +I Sbjct: 61 ITAEKEGISPQDVVDRYHRMNSEAFRKCG----ISFDYYGRTSSQGHHDTAKEFFLEIER 116 Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG 164 KG + ++ + E + +D V G + +P + + + Sbjct: 117 KGIFRRKTEKLFFDAKAERFLSDRYVTGTCPICNNPEANGDQCEQCGTHLSPTELLNPKS 176 Query: 165 --------------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210 ++F L +Q+ L +Y SH P N +++K GL D +++ Sbjct: 177 KLSDATPELRDTMHWYFPLGRFQEALEAYVASHEHDWRP-NVVNYTRTWLKQGLNDRAIT 235 Query: 211 RKTFDWGIKIP-DDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKA---KFW--PAD-- 259 R WGI++P DDP+ ++YVW DA+ Y++ T G ++ +W P Sbjct: 236 RD-LSWGIQVPLDDPEACGKVLYVWFDAVLGYISFTRQWAAEAGDESLWRAYWQDPESRV 294 Query: 260 LHVIGKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVID 312 ++ IGKD + FH + +PA L++ N L V + F+ +G K SKS + Sbjct: 295 VNFIGKDNVVFHTLMFPAILMAWNEGRQSGIYNLADNVPASEFMNFEGRKFSKSRNYAVY 354 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 E +E+ D LRY + KD + + R N +LA+ +GN + RSV Sbjct: 355 LGEFLEKFPADTLRYSIAMNYPENKDTDFSWQDFQNRTNGELADTLGNFIKRSVDFTNSR 414 Query: 373 YDGMIPTPGAFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 +DG++P + T+ D ++L + S+ ++++ + + I + + + +R+ Sbjct: 415 FDGVVPF--SCTDDDWNVLGIDWSQTIEKLDQAYEQFHIRETASLGMDIARSANRFLTES 472 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491 +PW++ KT+ + A+ + +++ + LAI L +P+ A +I+ +L S+D Sbjct: 473 EPWKVIKTDREAAAKTMALSLNLCYALAITLYPVIPETAGRIYAMLGFEG------SIDA 526 Query: 492 RLKPG 496 R+K G Sbjct: 527 RIKRG 531 >gi|330937550|gb|EGH41491.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B] Length = 682 Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 138/546 (25%), Positives = 239/546 (43%), Gaps = 49/546 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D AD L + +D+F T + + +++K++ D G I Sbjct: 61 RAEKEGITPEQLIANVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYKRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164 + ++ + + D KG A+ QY A + P + + Sbjct: 120 ATRSVTQYFDPEKKMFLA-DRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAIS 178 Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 +FF L A+ L + S L N++ ++ SGL+ +SR Sbjct: 179 GATPVLKDSKHFFFDLPAFDAMLKRWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266 +G +IPD+P YVW+DA Y+ + L PD +W H IGKD Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A+L P + HG++ G+K+SKS G I ++ + + LR Sbjct: 296 IVNFHALFWPAMLEGADLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPE 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDR 443 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGRQDE 471 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500 V + + + RQL I L+ +P L A K ++ + E+ + +L P L Sbjct: 472 VQAVCALGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKILLTNHQLNPFSALM 531 Query: 501 KTFDPI 506 DP+ Sbjct: 532 TRIDPV 537 >gi|222098488|ref|YP_002532546.1| methionyl-tRNA synthetase [Bacillus cereus Q1] gi|254782851|sp|B9J4E0|SYM_BACCQ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|221242547|gb|ACM15257.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus cereus Q1] Length = 544 Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 131/513 (25%), Positives = 240/513 (46%), Gaps = 45/513 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K DQ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKDIADQYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ + E+ + R N + +VK GL+D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKTAVENVKQ--TGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G +FW ++ +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGEDDQEFWDSEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + + Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIDVELKDKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + + + E ++ AL + V ++YFD ++PW+ ++ NP +Y Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDEKQPWKQREDNPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V +I LL+ F+P + +I + L + + N Sbjct: 474 CVYLIANFVNLLEPFLPFSSERIRNTLSIVNRN 506 >gi|170024779|ref|YP_001721284.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII] gi|226710944|sp|B1JPY8|SYM_YERPY RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|169751313|gb|ACA68831.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII] Length = 675 Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 132/504 (26%), Positives = 224/504 (44%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I AD+ RF R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + S+ + ISYD++ T + + +++ ++ G I Sbjct: 66 MGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYGRLKANGYIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160 S Y ++ + D KG A QY A ++P + + Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPEQYGDNCEVCGATYSPTELIDPKSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A+ D L ++ S L + N++ + SGL+ ++R +G Sbjct: 185 MRESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADL-----HVIGKDILRFH 271 ++PD P YVW+DA Y+ L + G +FW D H IGKDI+ FH Sbjct: 242 EVPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWGKDAKTDLYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L +N P +F HG++ G K+SKS G I ++ + D LRY+ Sbjct: 302 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKYLDADCLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVN D+ N + NL SR+ I K + G + A +D + Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNVDIVNKVVNLASRNAGFINKRFAGQL----ADQLADPVL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448 + I + N+ +A+ ++++L +RY D Q PW + K A + Sbjct: 418 YKTFTDAATSIADAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLHAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 478 SMGINLFRVLMTYLKPVLPSLTER 501 >gi|307251899|ref|ZP_07533800.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860591|gb|EFM92603.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 678 Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 132/501 (26%), Positives = 235/501 (46%), Gaps = 43/501 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I A G Sbjct: 1 MLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQG 60 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + +++ + +IS+D++ T + + + ++KK+ G I S Sbjct: 61 ITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVISQ 120 Query: 127 WYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM-------------- 160 + + + D V KG A+ QY + + ++P+ + Sbjct: 121 LFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIVK 179 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E E +FF L +++ L + S L E N++ + +SGL+ +SR +G I Sbjct: 180 ESEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFPI 236 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAIY 274 PD YVW+DA Y+ + L + +G +FW D H IGKDI+ FH+++ Sbjct: 237 PDAENKFFYVWLDAPIGYMASFKNLCDRNGLNFDEFWKKDSETELYHFIGKDIVYFHSLF 296 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L L P VF+HG++ G K+SKS G I ++ + + LRY+ ++ Sbjct: 297 WPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKLN 356 Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 +D + +RVN+D+ N + NL SR+ S I K ++G + A DE++ + Sbjct: 357 ERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADKLEDEALFAE 412 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451 ++I + +N+ ++A+ ++ L + ++Y D + PW + K A V + Sbjct: 413 FIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSMG 472 Query: 452 VEVIRQLAILLQAFVPKLANK 472 +E+ R L L+ +P+LA + Sbjct: 473 IELFRVLMSYLKPVLPQLAER 493 >gi|183598265|ref|ZP_02959758.1| hypothetical protein PROSTU_01650 [Providencia stuartii ATCC 25827] gi|188020435|gb|EDU58475.1| hypothetical protein PROSTU_01650 [Providencia stuartii ATCC 25827] Length = 675 Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 131/503 (26%), Positives = 230/503 (45%), Gaps = 44/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ R+ G +V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV+ + + ++ +D ISYD++ T + + +++ K+ + G I S Sbjct: 67 GVSPEDMIAAVNKEHQDDFAGFAISYDNYHSTHSEENKQLSELIYNKLKNNGFIKNRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160 Y ++ + D KG A+ QY A ++P + + Sbjct: 127 QLYD-PEKGMFLPDRFVKGTCPTCKAEDQYGDNCEVCGATYSPTELINPRSVVSGATPEM 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + E +FF L A+ D L ++ S L + N++ + +SGL+ ++R +G + Sbjct: 186 RDTEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDITRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHA 272 IPD P YVW+DA Y+ + L + G+ +FW D H IGKDI+ FH+ Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGNINFDEFWNKDSKTDLYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P +F HG++ G K+SKS G I ++ + D LRY+ + Sbjct: 303 LFWPAMLEGSGYRKPTNLFVHGYVTVNGAKMSKSRGTFITARSYLDHLDADCLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 ++ D + + +RVN+D+ N + NL SR+ I K + G + +D ++ Sbjct: 363 LSSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFIAKRFGGKLSD----NIADPALY 418 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLY 449 Q I + ++ +A+ ++++L +RY D + PW + K + Sbjct: 419 QQFIDAAQIIGDAYTSREYGKAVREIMALADLANRYVDEKAPWVVAKQEGKDQELQDICS 478 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P LA + Sbjct: 479 MGINLFRVLMTYLKPILPGLAKR 501 >gi|229181329|ref|ZP_04308659.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 172560W] gi|228602222|gb|EEK59713.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 172560W] Length = 544 Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 132/514 (25%), Positives = 239/514 (46%), Gaps = 47/514 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K D+ F+ L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218 E ++F L +Q K+ E E R+ I +VK GL+D ++SR G+ Sbjct: 183 EHFYFALHTFQQKIKKVVEIAKE---KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGV 238 Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRF 270 IP +D + +YVWI+A+T Y + + + G +FW ++ +V GKD + F Sbjct: 239 PIPVEGYEDKK--IYVWIEAVTGYYSASKHWVEETGKDDQEFWASEAKTYYVHGKDNIPF 296 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 H++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 297 HSVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFL 356 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +D + N++L GN V+R++ I K Y G++P E + Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDK 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 + + +++ E ++ AL V V ++YFD ++PW+ ++ +P +Y Sbjct: 417 V----EGLYKQVGEAIEQTKFKVALETVFDTVRFANKYFDEKQPWKQREDDPVSCEETIY 472 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V +I A LL+ F+P + ++ + L + N Sbjct: 473 NCVYLIANFAHLLEPFLPFSSERVRNTLSIVKRN 506 >gi|297572126|ref|YP_003697900.1| methionyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595] gi|296932473|gb|ADH93281.1| methionyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595] Length = 601 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 158/542 (29%), Positives = 236/542 (43%), Gaps = 86/542 (15%) Query: 7 LYISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + I +A+A+P N HIGH + +DV +R+ R+ G DVL +GTDEHG I AA Sbjct: 1 MKILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAAD 60 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT + D+N+R + L +SYD F RTT + H D + L ++GC Sbjct: 61 KEGVTPQQLADKNNRIIAEDLVNLGLSYDLFTRTTTQNHVDVVQHL----------FEGC 110 Query: 124 YSGWYSLRDEAYYNDDEVY------------------KGADGQYYNAQHN---------P 156 Y + +E D GA G +A N P Sbjct: 111 RDNGYMIVEEQLVAIDPKTGNTLPDRFIEGTCPICGAAGARGDQCDACGNQLDPQDLIDP 170 Query: 157 V--------QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL- 207 V + E YF L A D L S+ + E + R VISF K L D+ Sbjct: 171 VSKVSGLAPNFTSTEHYFLDLPALADALGSWLDEVEE---DGKWRPNVISFSKHLLDDVR 227 Query: 208 --SLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-- 260 ++SR WGI +P D P +YVW DA+ YL+ + + + P D Sbjct: 228 PRAMSRD-ISWGIPVPGWEDKPNKRLYVWFDAVVGYLSASIEWARRRAAAGEGSPEDWRE 286 Query: 261 ----------HVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFI 296 + +GKD + FH+ WPA LL+ N L LP +V + F+ Sbjct: 287 WWTNPEALSYYFMGKDNIVFHSQIWPAELLAYNGTGSKGGQARDFGTLNLPTQVVASEFL 346 Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 +G+K S S VI +V+ DALRYF+ D + +R N++L Sbjct: 347 TMEGKKFSSSKNVVIYVRDVLSRYQADALRYFISIAGPETSDSDFTWSEFVRRNNSELVA 406 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 GNLV+R+ +MI K++ G IPTPG + D +L + + AL + Sbjct: 407 AWGNLVNRTGAMIAKNF-GEIPTPGESEQIDTDLLDAVRGGFDTVGGLIGAHQQRAALTE 465 Query: 417 VISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 ++ LV E + Y +P++LK +R +TVL V+ + L ++ F+P +N I Sbjct: 466 IMRLVGEANTYVTRTEPFKLKAPEQRERLATVLNTLVQAVSDLNTMMSVFLPHSSNAIDQ 525 Query: 476 IL 477 +L Sbjct: 526 VL 527 >gi|88799942|ref|ZP_01115514.1| Methionyl-tRNA synthetase [Reinekea sp. MED297] gi|88777373|gb|EAR08576.1| Methionyl-tRNA synthetase [Reinekea sp. MED297] Length = 684 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 143/546 (26%), Positives = 243/546 (44%), Gaps = 51/546 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + K+ +++A+ Y N Q H+GH E I D+ RF + G + ++ D HG + Sbjct: 1 MSAKRKILVTSALPYANGQLHLGHLMEQIQTDIWVRFQKSMGHECMYVCADDTHGTAVML 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G + + ++++ + + + ++ I +D++ T + +++ ++ + G I Sbjct: 61 RAEKEGKSPEAWIEKMNADHKADSEGFLIGHDNYYSTHSNENQHYAELIYSRLKENGHIK 120 Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------- 160 Y E + D E G + +A + P + + Sbjct: 121 VKTIRQLYDPEKEIFLADRFVKGTCPKCKSEDQYGDACEVCSATYEPNELINPKSAYTGA 180 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 E E +FF L +Q L + S L N++ ++ SGL+ +SR Sbjct: 181 TPIEKESEHFFFDLPQFQTMLQEWTRSG---TLQDSVANKLSEWLDSGLQAWDISRDAPY 237 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-AKFWPAD-----LHVIGKDIL 268 +G +IP P YVW+DA Y+ + L D DG +W D H IGKDI+ Sbjct: 238 FGFEIPGAPGKYFYVWLDAPIGYMASFKNLCDRTDGLNFDDYWSKDSDAELYHFIGKDII 297 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FHA++WPA L SA P VF+HG+I GEK+SKS G I ++ + + LRY+ Sbjct: 298 NFHALFWPAMLTSAEFKTPDGVFAHGYITVNGEKMSKSRGTFIMASTYLKHLSPEYLRYY 357 Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ G +D + +RVN DL N N+ SR I K G + A E Sbjct: 358 YAAKLGYGVEDIDLNLTDFAQRVNTDLVNKFVNIASRCAGFIKKG-GGKLSDNIAEPELL 416 Query: 388 ESILSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +L + + L E RE +A+ +++ LV + + Y A++PW L K + Sbjct: 417 DEVLGSKNLIASLYESRE------FSKAVREIMRLVDKANEYIQAKEPWALAKDESKAQE 470 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503 + + + + R L+I L +P L K+ L V ++ F LD L G ++K F Sbjct: 471 VQDICSMGIHLFRALSIYLGPVLPALNEKVRAFLNV--DSLDFTDLDTTLT-GHAINK-F 526 Query: 504 DPIFPR 509 P+ R Sbjct: 527 KPLLTR 532 >gi|15602168|ref|NP_245240.1| methionyl-tRNA synthetase [Pasteurella multocida subsp. multocida str. Pm70] gi|13431880|sp|P57838|SYM_PASMU RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|12720538|gb|AAK02387.1| MetG [Pasteurella multocida subsp. multocida str. Pm70] Length = 682 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 145/538 (26%), Positives = 243/538 (45%), Gaps = 59/538 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ A+ Y N H+GH E I AD+ RF R+ G V F D HG I A G Sbjct: 8 ILVTCALPYANGAIHLGHLLEHIQADIWVRFQRMRGHKVHFICADDAHGTPIMLNADKLG 67 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + + ++ + + +ISYD++ T + ++KK+ G I S Sbjct: 68 ITPEALIARSKADHVADFEGFNISYDNYHSTHSPENEALTAEMYKKLRANGFIKSRTISQ 127 Query: 127 WYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM-------------- 160 + ++ + D KG A+ QY ++ ++P + + Sbjct: 128 LFD-PEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSSTYSPTELINPRSVVSGATPVLK 186 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E E +FF L A++ L ++ +S L E N++ + +SGL+ +SR +G KI Sbjct: 187 ESEHFFFDLPAFEGMLKAWIKSGS---LQPEIANKMQEWFESGLQQWDISRDAPYFGFKI 243 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAIY 274 PD YVW+DA Y+ + L + G FW D H IGKDI+ FH+++ Sbjct: 244 PDTEDKYFYVWLDAPIGYMASFKNLCDKTGLNFDDFWKKDSSAELYHFIGKDIVYFHSLF 303 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L +L P VF+HG++ G K+SKS G I + + + LRY+ ++ Sbjct: 304 WPAMLDGCDLRKPTNVFAHGYVTVNGVKMSKSRGTFIQASTYLRHLAPEYLRYYYAAKLN 363 Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 +D + + +R+NAD+ N NL SRS I K +DG + A E +L+ Sbjct: 364 NRIEDLDLNLEDFVQRLNADVVNKFVNLASRSAGFITKRFDGKLSAEIAEPE----LLAE 419 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451 +I + + + + +V+ L + ++Y D + PW + K A V + Sbjct: 420 FVEKAAQIATYYEEREFGKVVREVMQLADKANKYIDDKAPWVMAKEEGREAELQAVCSMA 479 Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADE------NR--------CFQSLDQRLKP 495 +++ R LAI L+ +P++ + F+ DE NR F++L QRL P Sbjct: 480 LQLFRVLAIYLKPVIPQIIARA--EAFLQDELTWESLNRPLLNHAILPFKALAQRLDP 535 >gi|145638841|ref|ZP_01794449.1| tellurite resistance protein TehB [Haemophilus influenzae PittII] gi|145271813|gb|EDK11722.1| tellurite resistance protein TehB [Haemophilus influenzae PittII] gi|309750825|gb|ADO80809.1| Methionyl-tRNA synthetase [Haemophilus influenzae R2866] Length = 682 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 135/503 (26%), Positives = 238/503 (47%), Gaps = 45/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G + F D HG I A Sbjct: 7 KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + RD A +IS+D++ T + + ++ K+ G I Sbjct: 67 GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A++ L + S L E N++ + +SGL+ +SR +G Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272 +IP YVW+DA Y+ + L + +G +FW A+L H IGKDI+ FH+ Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCDREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF+HG++ G K+SKS G I + + + LRY+ + Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361 Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + +D ++ D +RVN D+ N + NL SR+ I K ++G + A DE++ Sbjct: 362 LNDRIEDLDFNLDDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDEALF 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + ++I +++ ++A+ ++++L + ++Y D + PW + K A V Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +PKLA + Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500 >gi|320459453|dbj|BAJ70074.1| methionyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 616 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 148/526 (28%), Positives = 245/526 (46%), Gaps = 66/526 (12%) Query: 9 ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A+ G+ Sbjct: 1 MNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGL 60 Query: 68 TTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY-- 124 T + ++ +R +D+ D L +SYD F RTT H + ++K+ + G IYKG Sbjct: 61 TAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGSQQV 119 Query: 125 ----SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QWME 161 S +L D + + +GA G +A N PV ++ + Sbjct: 120 AISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFEQ 179 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIK 219 E YF L A + ++ E+ + R VI+F K++ T DWGI Sbjct: 180 TEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWGIP 233 Query: 220 IP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGKDI 267 +P D+P +YVW DA+ YL+ + G K+ W D + +GKD Sbjct: 234 VPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPKCPAYYFMGKDN 293 Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 + FH+ WP+ +L+ N L LP++V + F+ +G+K S S G VI Sbjct: 294 ITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYV 353 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +++ VDA+RY++ D + + N +LA+ GNLV+R ++I K++ Sbjct: 354 KDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNF 413 Query: 374 DGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 G IP + T D +L S + +++ AL++ + +V ++++Y A Sbjct: 414 -GEIPPLDEDSMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISAT 472 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +PW++K + R TVL+V + + LL F+P A K+++ L Sbjct: 473 EPWKIKD-DQARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEAL 517 >gi|239621089|ref|ZP_04664120.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239516011|gb|EEQ55878.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 616 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 148/526 (28%), Positives = 245/526 (46%), Gaps = 66/526 (12%) Query: 9 ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A+ G+ Sbjct: 1 MNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGL 60 Query: 68 TTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY-- 124 T + ++ +R +D+ D L +SYD F RTT H + ++K+ + G IYKG Sbjct: 61 TAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQQV 119 Query: 125 ----SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QWME 161 S +L D + + +GA G +A N PV ++ + Sbjct: 120 AISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFEQ 179 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIK 219 E YF L A + ++ E+ + R VI+F K++ T DWGI Sbjct: 180 TEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWGIP 233 Query: 220 IP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGKDI 267 +P D+P +YVW DA+ YL+ + G K+ W D + +GKD Sbjct: 234 VPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDN 293 Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 + FH+ WP+ +L+ N L LP++V + F+ +G+K S S G VI Sbjct: 294 ITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYV 353 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +++ VDA+RY++ D + + N +LA+ GNLV+R ++I K++ Sbjct: 354 KDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNF 413 Query: 374 DGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 G IP + T D +L S + +++ AL++ + +V ++++Y A Sbjct: 414 -GEIPPLDEDSMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISAT 472 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +PW++K + R TVL+V + + LL F+P A K+++ L Sbjct: 473 EPWKIKD-DQARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEAL 517 >gi|289647567|ref|ZP_06478910.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250] Length = 682 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 139/546 (25%), Positives = 238/546 (43%), Gaps = 49/546 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +D + + D AD L + +D+F T + + +++ ++ D G I Sbjct: 61 RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160 + ++ + + D KG A+ QY A + P Sbjct: 120 ATRSVTQYFDPEKKMFLAD-RFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAIS 178 Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + + +FF L A+ L S+ S L N++ ++ SGL+ +SR Sbjct: 179 GTTPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266 +G +IPD+P YVW+DA Y+ + L PD +W H IGKD Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A L P + HG++ G+K+SKS G I ++ + + LR Sbjct: 296 IVNFHALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPE 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWTLAKQEGKQDE 471 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500 V + + + RQL I L+ +P L A K ++ + E+ + +L P L Sbjct: 472 VQAVCSLGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKTLLGNHQLNPFSALM 531 Query: 501 KTFDPI 506 DP+ Sbjct: 532 TRIDPL 537 >gi|311114169|ref|YP_003985390.1| methionine--tRNA ligase [Gardnerella vaginalis ATCC 14019] gi|310945663|gb|ADP38367.1| methionine--tRNA ligase [Gardnerella vaginalis ATCC 14019] Length = 623 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 151/529 (28%), Positives = 242/529 (45%), Gaps = 68/529 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A Sbjct: 6 ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 65 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ + ++ +R +D+ D L +SYD F RTT H + ++++ G IYKG Sbjct: 66 GVSAQELANRYNRVITKDLCD-LGLSYDLFTRTTTANHEHVVQEMFRQCLKNGYIYKGTQ 124 Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158 S +L D Y GADG + NPV + Sbjct: 125 KVAISPSTGRTLPDR-YIEGTCPLCGADGARGDQCDACGNELDPDELINPVSKINGETPR 183 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216 + E E YF L A D LS+ S + R VI+F K++ T DW Sbjct: 184 FEETEHYFLDLPALADANLSWLNSRDGW------RTNVINFSIGLFKEVKPRAITRDIDW 237 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIG 264 GI +P D+P +YVW DA+ YL+ + G + W D + +G Sbjct: 238 GIPVPVEGWVDNPNKRLYVWFDAVIGYLSASIEWARRQGKPDAWRDWWCDPKSPGYYFMG 297 Query: 265 KDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNV 310 KD + FH+ WP+ +L+ N L +P++V + F+ +G+K S S G V Sbjct: 298 KDNITFHSQIWPSEMLAYNGAGSKGGEAGVYGPLNMPEQVVASEFMTMEGKKFSSSRGIV 357 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 I +++ VDA+RY++ D + + N +LA GNLV+R ++I Sbjct: 358 IYVKDILARYPVDAVRYYISIAGPENSDADFTWAEFVRHNNEELAASWGNLVNRVANLIH 417 Query: 371 KDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428 K++ G IP + T+ D ++L S + + ++ AL + + +VS++++Y Sbjct: 418 KNF-GEIPALDENSMTDMDRALLDQTSNAFEIVGGLIERHHQKNALNEAMRVVSDINKYI 476 Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A +PW++K + R TVL+V + + LL F+P A K+++ L Sbjct: 477 SATEPWKIKD-DEARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEAL 524 >gi|307256395|ref|ZP_07538177.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865025|gb|EFM96926.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 678 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 132/501 (26%), Positives = 235/501 (46%), Gaps = 43/501 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I A G Sbjct: 1 MLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQG 60 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + +++ + +IS+D++ T + + + ++KK+ G I S Sbjct: 61 ITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVISQ 120 Query: 127 WYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM-------------- 160 + + + D V KG A+ QY + + ++P+ + Sbjct: 121 LFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIVK 179 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E E +FF L +++ L + S L E N++ + +SGL+ +SR +G I Sbjct: 180 ESEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFPI 236 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAIY 274 PD YVW+DA Y+ + L + +G +FW D H IGKDI+ FH+++ Sbjct: 237 PDAENKFFYVWLDAPIGYMASFKNLCDRNGLNFDEFWKKDSETELYHFIGKDIVYFHSLF 296 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L L P VF+HG++ G K+SKS G I ++ + + LRY+ ++ Sbjct: 297 WPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKLN 356 Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 +D + +RVN+D+ N + NL SR+ S I K ++G + A DE++ + Sbjct: 357 ERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKCFEGKL----ADKLEDEALFAE 412 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451 ++I + +N+ ++A+ ++ L + ++Y D + PW + K A V + Sbjct: 413 FIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSMG 472 Query: 452 VEVIRQLAILLQAFVPKLANK 472 +E+ R L L+ +P+LA + Sbjct: 473 IELFRVLMSYLKPVLPQLAER 493 >gi|219851353|ref|YP_002465785.1| methionyl-tRNA synthetase [Methanosphaerula palustris E1-9c] gi|254782869|sp|B8GFL4|SYM_METPE RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|219545612|gb|ACL16062.1| methionyl-tRNA synthetase [Methanosphaerula palustris E1-9c] Length = 663 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 136/509 (26%), Positives = 227/509 (44%), Gaps = 40/509 (7%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ + Y N H+GH + D+ R+ R G +V+F G+D HG I +A+ G Sbjct: 6 ILVTCGLPYTNGPCHLGHLRTYVPGDMYVRYLRHRGEEVVFVCGSDNHGTPIVVSAEEQG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K + +F + + I +D F T K +H R + +++ DKG IY S Sbjct: 66 VTPKELSLKYHHHFEETFIKMGIRFDRFGMTDGKANHHRTREMMQRLIDKGYIYSATVSQ 125 Query: 127 WYSLRDEAYYND----------------DEVYKGADGQYYNAQ-HNPV--------QWME 161 Y + D DE +G + +PV + Sbjct: 126 SYCTTCSRFLPDRYVEGICPHCGAVARGDECDQGCGKHLEPGEIRDPVCKVCGTRAELRS 185 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 +E +FF+LSA+++ L ++ + +N + +V L D ++R T DWG+K P Sbjct: 186 QEHFFFKLSAFKEFLGTFLKG---VRGTDNAKNYALGWVNDDLHDWCITR-TLDWGVKFP 241 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD---LHVIGKDILRFHAIYWPA 277 ++YVW+DA Y+ T G + FW D H IG DI H I+WPA Sbjct: 242 GRDDLVVYVWVDAPVGYIAFTEEWAAAHGRDWREFWCGDGEITHFIGGDITYHHCIFWPA 301 Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIAC 335 L A +P + + G + K SKS G V+ + ++G+ D LRY+L+ + Sbjct: 302 LLKGAGYGVPSAIVASGMLKIDDHKFSKSRGYVVWTNDDYLDLGLPADYLRYYLLAYTSH 361 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 K+ + RVN +L N GN V R++ G IP ++D+ IL Sbjct: 362 TKELNFSWQAFADRVNNELVNTFGNFVHRTLHFAHAQGIG-IPD----LDADQEILQRID 416 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 + + M A+ V++L + + Y PW+L KT+ A V+ ++++ Sbjct: 417 ETIAAVDTAMDAFEFKNAVDAVMTLAAFGNNYIQTAAPWKLIKTDRPAAVQVIRNCLQLV 476 Query: 456 RQLAILLQAFVPKLANKIFDILFVADENR 484 R LA+L+ +P+ A+KI+ +L D+ R Sbjct: 477 RALALLIDPTMPETASKIWMMLGETDQVR 505 >gi|187649798|sp|A3MZ70|SYM_ACTP2 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS Length = 679 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 133/502 (26%), Positives = 234/502 (46%), Gaps = 43/502 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I A Sbjct: 4 KMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + +++ + +IS+D++ T + + + ++KK+ G I S Sbjct: 64 GITPEQLIEKAKADHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVIS 123 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------- 160 + + + D V KG A+ QY + + ++P+ + Sbjct: 124 QLFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAISGATPIV 182 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E +FF L ++ L + S L E N++ + +SGL+ +SR +G Sbjct: 183 KESEHFFFDLPNFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFP 239 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAI 273 IPD YVW+DA Y+ + L + G +FW D H IGKDI+ FH++ Sbjct: 240 IPDAENKFFYVWLDAPIGYMASFKNLCDRTGLNFDEFWKKDSETELYHFIGKDIVYFHSL 299 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L L P VF+HG++ G K+SKS G I ++ + + LRY+ ++ Sbjct: 300 FWPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKL 359 Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 +D + +RVN+D+ N + NL SR+ S I K ++G + A DE++ + Sbjct: 360 NERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADKLEDEALFA 415 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450 ++I + +N+ ++A+ ++ L + ++Y D + PW + K A V + Sbjct: 416 EFIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSM 475 Query: 451 TVEVIRQLAILLQAFVPKLANK 472 +E+ R L L+ +P+LA + Sbjct: 476 GIELFRVLMSYLKPVLPQLAER 497 >gi|289626587|ref|ZP_06459541.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330867252|gb|EGH01961.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 682 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 139/546 (25%), Positives = 238/546 (43%), Gaps = 49/546 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +D + + D AD L + +D+F T + + +++ ++ D G I Sbjct: 61 RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160 + ++ + + D KG A+ QY A + P Sbjct: 120 ATRSVTQYFDPEKKMFLAD-RFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAIS 178 Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + + +FF L A+ L S+ S L N++ ++ SGL+ +SR Sbjct: 179 GTTPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266 +G +IPD+P YVW+DA Y+ + L PD +W H IGKD Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A L P + HG++ G+K+SKS G I ++ + + LR Sbjct: 296 IVNFHALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPE 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWTLAKQEGKQDE 471 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500 V + + + RQL I L+ +P L A K ++ + E+ + +L P L Sbjct: 472 VQAVCSLGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKTLLGNHQLNPFSALM 531 Query: 501 KTFDPI 506 DP+ Sbjct: 532 TRIDPL 537 >gi|218890270|ref|YP_002439134.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa LESB58] gi|226695283|sp|B7UWJ8|SYM_PSEA8 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|218770493|emb|CAW26258.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa LESB58] Length = 677 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 131/520 (25%), Positives = 231/520 (44%), Gaps = 52/520 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF ++ G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAVYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T++ +D + + D AD L + +D++ T + + + ++ K+ D G I Sbjct: 61 RAEREGITSEQLIDAVRAEHMGDFADFL-VDFDNYHSTHSEENRELSSAIYLKLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164 + ++ + + D + G + + A + P + + + Sbjct: 120 DTRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISG 179 Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 YFF+L ++ L + S L N++ ++ SGL+ +SR Sbjct: 180 ATPVLKESLHYFFKLPDFEAMLKQWTRSG---ALQESVANKLAEWLDSGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267 +G +IPD P YVW+DA Y+ + L P+ FW D H IGKDI Sbjct: 237 YFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWGKDSSAELYHFIGKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L A P + HG++ G+K+SKS G + ++ + + LRY Sbjct: 297 VNFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLRY 356 Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGA 382 + ++ G +D + + ++VN+DL + N+ SR I K G++ P P Sbjct: 357 YYASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAP-- 414 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440 +L+ I E + + +RA+ ++++L + + Q PW L K Sbjct: 415 ------ELLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQ 468 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 D+ V + + + RQL I L+ +PKLA L VA Sbjct: 469 QDKVQAVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVA 508 >gi|257486635|ref|ZP_05640676.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330984847|gb|EGH82950.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010115|gb|EGH90171.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 682 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 139/546 (25%), Positives = 238/546 (43%), Gaps = 49/546 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +D + + D AD L + +D+F T + + +++ ++ D G I Sbjct: 61 RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160 + ++ + + D KG A+ QY A + P Sbjct: 120 ATRSVTQYFDPEKKMFLAD-RFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAIS 178 Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + + +FF L A+ L S+ S L N++ ++ SGL+ +SR Sbjct: 179 GTTPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266 +G +IPD+P YVW+DA Y+ + L PD +W H IGKD Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A L P + HG++ G+K+SKS G I ++ + + LR Sbjct: 296 IVNFHALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPE 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDE 471 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500 V + + + RQL I L+ +P L A K ++ + E+ + +L P L Sbjct: 472 VQAVCSLGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKTLLGNHQLNPFSALM 531 Query: 501 KTFDPI 506 DP+ Sbjct: 532 TRIDPL 537 >gi|107103015|ref|ZP_01366933.1| hypothetical protein PaerPA_01004084 [Pseudomonas aeruginosa PACS2] Length = 677 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 131/520 (25%), Positives = 231/520 (44%), Gaps = 52/520 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF ++ G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAVYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T++ +D + + D AD L + +D++ T + + + ++ K+ D G I Sbjct: 61 RAEREGITSEQLIDAVRAEHMGDFADFL-VDFDNYHSTHSEENRELSSAIYLKLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164 + ++ + + D + G + + A + P + + + Sbjct: 120 DTRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISG 179 Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 YFF+L ++ L + S L N++ ++ SGL+ +SR Sbjct: 180 ATPVLKESLHYFFKLPDFEAMLKQWTRSG---ALQESVANKLAEWLDSGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267 +G +IPD P YVW+DA Y+ + L P+ FW D H IGKDI Sbjct: 237 YFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWGKDSSAELYHFIGKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L A P + HG++ G+K+SKS G + ++ + + LRY Sbjct: 297 VNFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLRY 356 Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGA 382 + ++ G +D + + ++VN+DL + N+ SR I K G++ P P Sbjct: 357 YYASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAP-- 414 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440 +L+ I E + + +RA+ ++++L + + Q PW L K Sbjct: 415 ------ELLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQ 468 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 D+ V + + + RQL I L+ +PKLA L VA Sbjct: 469 QDKVQAVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVA 508 >gi|71735657|ref|YP_273635.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A] gi|123747684|sp|Q48LT7|SYM_PSE14 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|71556210|gb|AAZ35421.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS) [Pseudomonas syringae pv. phaseolicola 1448A] Length = 682 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 139/546 (25%), Positives = 238/546 (43%), Gaps = 49/546 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +D + + D AD L + +D+F T + + +++ ++ D G I Sbjct: 61 RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160 + ++ + + D KG A+ QY A + P Sbjct: 120 ATRSVTQYFDPEKKMFLAD-RFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAIS 178 Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + + +FF L A+ L S+ S L N++ ++ SGL+ +SR Sbjct: 179 GTTPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266 +G +IPD+P YVW+DA Y+ + L PD +W H IGKD Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A L P + HG++ G+K+SKS G I ++ + + LR Sbjct: 296 IVNFHALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 356 YYYASKLGRGVDDLDLNFEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPE 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDE 471 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500 V + + + RQL I L+ +P L A K ++ + E+ + +L P L Sbjct: 472 VQAVCSLGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKTLLGNHQLNPFSALM 531 Query: 501 KTFDPI 506 DP+ Sbjct: 532 TRIDPL 537 >gi|188533441|ref|YP_001907238.1| methionyl-tRNA synthetase [Erwinia tasmaniensis Et1/99] gi|226710906|sp|B2VIF6|SYM_ERWT9 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|188028483|emb|CAO96345.1| Methionyl-tRNA synthetase [Erwinia tasmaniensis Et1/99] Length = 676 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 129/504 (25%), Positives = 224/504 (44%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I AD+ R+ R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV + + S+ + +ISYD++ T + + + +++ ++ + G I Sbjct: 66 MGVAPEQMIADMSQEHQTDFAGFNISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + +A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPNCKSPDQYGDNCEVCSATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L + L ++ S L + N++ + SGL+ +SR +G Sbjct: 185 LRDSEHFFFDLPEFSAMLQAWTRSG---ALQEQVANKMQEWFDSGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271 +IP P YVW+DA Y+ + L + G FW D H IGKDI+ FH Sbjct: 242 EIPGAPGKYFYVWLDAPIGYMGSFKNLCDKRGDIDFDAFWQKDSDAELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P +F HG++ G K+SKS G I ++ + D+LRY+ Sbjct: 302 SLFWPAMLEGSQFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K + G + A D ++ Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQLSAELA----DPAL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 I + ++ RA+ ++++L +RY D Q PW + K A + Sbjct: 418 YQTFIDASTSIAQAWSSREFSRAVREIMALADAANRYVDEQAPWVVAKQEGRDADLQAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P LA + Sbjct: 478 SMGINLFRVLMTWLKPVMPSLAER 501 >gi|71065987|ref|YP_264714.1| methionyl-tRNA synthetase [Psychrobacter arcticus 273-4] gi|123748115|sp|Q4FRS8|SYM_PSYA2 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|71038972|gb|AAZ19280.1| methionyl-tRNA synthetase [Psychrobacter arcticus 273-4] Length = 700 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 151/556 (27%), Positives = 251/556 (45%), Gaps = 60/556 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 MK RE L +++A+ Y N H+GH E I D+ R + G V + D HG I Sbjct: 1 MKVREIL-VTSALPYANGDIHLGHLVEYIQTDIWVRSMKAQGHKVTYVCADDAHGTAIML 59 Query: 61 AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A++ GVT + + + + D A L I++D++ T + + + ++++++ D G I Sbjct: 60 KAEDNGVTPEQQIANVQAAHEADFAKFL-INFDNYHSTHSEENREFSELIYRRLRDTGHI 118 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY-------------------YNAQH 154 + + + D V KG A QY Y+ Sbjct: 119 STRDVEQLFDPEKQLFLADRFV-KGTCPECAAPDQYGDNCEVCGTTYDATELKDPYSTLS 177 Query: 155 NPVQWME-EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 N ++ + YFF L ++ L + S L + N++ + +GL +SR Sbjct: 178 NATPILKTSKHYFFDLPEFEQFLKDWTRSDNR--LQVSVANKLQEWFDAGLTSWDISRDA 235 Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAK-----FWPAD---- 259 +G +IPD +P YVW+DA Y+ + L D G+ +W + Sbjct: 236 PYFGFQIPDTPSDEPDKYFYVWLDAPVGYMASFKNLCDKRAGTDDALDFDHYWAQENEHK 295 Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316 H IGKDI+ FHA++WPA L + L P VF+HGF++ GEK+SKS G I Sbjct: 296 TEVYHFIGKDIVYFHALFWPAMLAGSELRTPTAVFAHGFLMVNGEKMSKSRGTFIKADTY 355 Query: 317 IEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 E + + LRY+ +++ +D D + ++VN+DL + N+ SRS +LK YDG Sbjct: 356 AEHLHPEYLRYYFASKLSDKVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFLLKKYDG 415 Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 M+ A + S+L ++ EI +N+ RA+ ++ + + Y D +KPW Sbjct: 416 MLTDVCA----EPSLLEDITKTGDEIAAAYENREFSRAMRLIMQCADKANEYIDEKKPWA 471 Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493 L K V V + + RQL + L +P+L + L + D + F S ++ L Sbjct: 472 LAKVEGAEQEVQDVCSVAINIFRQLMVYLAPVLPELTANAKEFLNINDLS--FASRNEWL 529 Query: 494 KPGFMLHKTFDPIFPR 509 G ++K F P+ R Sbjct: 530 L-GHQINK-FKPLMQR 543 >gi|261855653|ref|YP_003262936.1| methionyl-tRNA synthetase [Halothiobacillus neapolitanus c2] gi|261836122|gb|ACX95889.1| methionyl-tRNA synthetase [Halothiobacillus neapolitanus c2] Length = 685 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 135/500 (27%), Positives = 225/500 (45%), Gaps = 48/500 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N H+GH E I D+ R +L G + + D HG I AQ Sbjct: 8 RILVTSALPYANGPLHLGHIIETIQTDIWVRAQKLFGNECRYLCADDTHGTPIMLKAQQE 67 Query: 66 GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + D AD + I +D F T + + ++K++ +G I + Sbjct: 68 GITPEELITRIGNSHKADFADFM-IGFDIFHSTHSEENRRMASEIFKRLDARGLISRKTI 126 Query: 125 SGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQW-------------- 159 Y E + D E K GA QY A ++P + Sbjct: 127 KQAYDPEKEMFLPDRFIKGECPKCGALDQYGDNCEKCGATYSPTELKNPRSVLSGATPVE 186 Query: 160 MEEEGYFFRLSAYQDKL---LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + E YFF L QD+L LS P R ++ + SGL+ +SR + Sbjct: 187 RDSEHYFFDLPKMQDRLKQWLSEDRVQPAI------RAKLQEWFDSGLQAWDISRDAPYF 240 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRF 270 G +IP P YVW+DA Y+ L G ++W + +H IGKDI F Sbjct: 241 GFEIPGAPGKFFYVWLDAPIGYIGAFLKLAESTGLDFDEYWGENAQTELIHFIGKDIAYF 300 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H ++WPA L+ A L P V++HGF+ GEK+SKS G I + + ALRY+ Sbjct: 301 HTLFWPATLMGAGLRTPTAVYAHGFLTLNGEKMSKSRGTFIQARTYLNHLDPQALRYYFA 360 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ G D + + RVN+DL + N+ SR I K ++ + A +E E Sbjct: 361 AKLSSGIDDIDLSLEDFRLRVNSDLVGKVVNIASRCAGFIHKQFNSELSAELAHSELHEQ 420 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 +++ + I+ + + +A+ ++++L V++Y D +KPW + K+ PD + V Sbjct: 421 LVAAA----ESIKTRYERRETGQAMREIMALADLVNQYIDEKKPWAMAKS-PDSLAAVQG 475 Query: 450 VTVEVIRQLAILLQAFVPKL 469 V + + IL+ P L Sbjct: 476 VCTDGLNAFRILMTYLTPVL 495 >gi|298488744|ref|ZP_07006773.1| Methionyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156817|gb|EFH97908.1| Methionyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 682 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 139/546 (25%), Positives = 237/546 (43%), Gaps = 49/546 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +D + + D AD L + +D+F T + + +++ ++ D G I Sbjct: 61 RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160 + ++ + + D KG A+ QY A + P Sbjct: 120 ATRSVTQYFDPEKKMFLAD-RFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAIS 178 Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + + +FF L A+ L S+ S L N++ ++ SGL+ +SR Sbjct: 179 GTTPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266 +G +IPD+P YVW+DA Y+ + L PD +W H IGKD Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A L P + HG++ G+K+SKS G I + + + LR Sbjct: 296 IVNFHALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLHHLPPEYLR 355 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPE 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDE 471 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500 V + + + RQL I L+ +P L A K ++ + E+ + +L P L Sbjct: 472 VQAVCSLGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKTLLANHQLNPFSALM 531 Query: 501 KTFDPI 506 DP+ Sbjct: 532 TRIDPL 537 >gi|15598678|ref|NP_252172.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa PAO1] gi|25009398|sp|Q9HYC7|SYM_PSEAE RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|9949627|gb|AAG06870.1|AE004769_3 methionyl-tRNA synthetase [Pseudomonas aeruginosa PAO1] Length = 677 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 131/520 (25%), Positives = 231/520 (44%), Gaps = 52/520 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF ++ G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAVYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T++ +D + + D AD L + +D++ T + + + ++ K+ D G I Sbjct: 61 RAEREGITSEQLIDAVRAEHMGDFADFL-VDFDNYHSTHSEENRELSSAIYLKLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164 + ++ + + D + G + + A + P + + + Sbjct: 120 DTRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISG 179 Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 YFF+L ++ L + S L N++ ++ SGL+ +SR Sbjct: 180 ATPVLKESLHYFFKLPDFEAMLKQWTRSG---ALQESVANKLAEWLDSGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267 +G +IPD P YVW+DA Y+ + L P+ FW D H IGKDI Sbjct: 237 YFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWGKDSGAELYHFIGKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L A P + HG++ G+K+SKS G + ++ + + LRY Sbjct: 297 VNFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLRY 356 Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGA 382 + ++ G +D + + ++VN+DL + N+ SR I K G++ P P Sbjct: 357 YYASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAP-- 414 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440 +L+ I E + + +RA+ ++++L + + Q PW L K Sbjct: 415 ------ELLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQ 468 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 D+ V + + + RQL I L+ +PKLA L VA Sbjct: 469 QDKVQAVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVA 508 >gi|116051500|ref|YP_789665.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|296388000|ref|ZP_06877475.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa PAb1] gi|313108844|ref|ZP_07794829.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa 39016] gi|122260639|sp|Q02QX1|SYM_PSEAB RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|115586721|gb|ABJ12736.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|310881331|gb|EFQ39925.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa 39016] Length = 678 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 131/520 (25%), Positives = 231/520 (44%), Gaps = 52/520 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF ++ G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAVYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T++ +D + + D AD L + +D++ T + + + ++ K+ D G I Sbjct: 61 RAEREGITSEQLIDAVRAEHMGDFADFL-VDFDNYHSTHSEENRELSSAIYLKLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164 + ++ + + D + G + + A + P + + + Sbjct: 120 DTRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISG 179 Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 YFF+L ++ L + S L N++ ++ SGL+ +SR Sbjct: 180 ATPVLKESLHYFFKLPDFEAMLKQWTRSG---ALQESVANKLAEWLDSGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267 +G +IPD P YVW+DA Y+ + L P+ FW D H IGKDI Sbjct: 237 YFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWGKDSSAELYHFIGKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L A P + HG++ G+K+SKS G + ++ + + LRY Sbjct: 297 VNFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLRY 356 Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGA 382 + ++ G +D + + ++VN+DL + N+ SR I K G++ P P Sbjct: 357 YYASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAP-- 414 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440 +L+ I E + + +RA+ ++++L + + Q PW L K Sbjct: 415 ------ELLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQ 468 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 D+ V + + + RQL I L+ +PKLA L VA Sbjct: 469 QDKVQAVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVA 508 >gi|330981556|gb|EGH79659.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 682 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 138/546 (25%), Positives = 239/546 (43%), Gaps = 49/546 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D AD L + +D+F T + + +++K++ D G I Sbjct: 61 RAEKEGITPEQLIANVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYKRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164 + ++ + + D KG A+ QY A + P + + Sbjct: 120 ATRSVTQYFDPEKKMFLA-DRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAIS 178 Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 +FF L A+ L + S L N++ ++ SGL+ +SR Sbjct: 179 GATPVLKDSKHFFFDLPAFDVMLKRWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266 +G +IPD+P YVW+DA Y+ + L PD +W H IGKD Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A+L P + HG++ G+K+SKS G I ++ + + LR Sbjct: 296 IVNFHALFWPAMLEGADLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPE 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDR 443 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGRQDE 471 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500 V + + + RQL I L+ +P L A K ++ + E+ + +L P L Sbjct: 472 VQAVCALGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKILLTNHQLNPFSALM 531 Query: 501 KTFDPI 506 DP+ Sbjct: 532 TRIDPV 537 >gi|312890801|ref|ZP_07750330.1| methionyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603] gi|311296584|gb|EFQ73724.1| methionyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603] Length = 688 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 149/548 (27%), Positives = 251/548 (45%), Gaps = 59/548 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K ++ I+ A+ Y N H+GH A I AD+ AR+ RL DV+F G+DEHG IA Sbjct: 4 KTYKRYTITAALPYANGPKHLGHLAGAYIPADLYARYLRLQKRDVVFVCGSDEHGTAIAN 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A T + +D+ + + + IS+D + RT++ HH T + + ++DKG Sbjct: 64 QAMKEHTTPRAIIDKYHELIKVSFEQIGISFDIYHRTSDPIHHQTAQDFFTNLNDKGIFV 123 Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWMEEEG----- 164 + +Y A+ D +E G + +P + + Sbjct: 124 EKEEEQYYDEHAGAFLADRYIIGTCPNCGNENAYGDQCEKCGTSLSPEELIHPRSTLSGN 183 Query: 165 ---------YFFRLSAYQDKLLSYYESHPEFILPIERRN-------EVISFVKSGLKDLS 208 ++ L Y+D L E+IL ++ + S++ GL + Sbjct: 184 KPILKPTKHWYLPLDQYEDWL-------KEWILKDHAKDWRATVYGQCKSWIDGGLHPRA 236 Query: 209 LSRKTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGY--LDNPDGSKAKFWPAD----L 260 ++R DWGIK+P ++YVW DA Y++ T LDN D +W + + Sbjct: 237 VTRD-LDWGIKVPVPGADGKVLYVWFDAPIGYISATKQWALDN-DKDWKLYWQDEESKLV 294 Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 H IGKD + FH I +P L + + LP V ++ F+ +G+K+S S G ++ E +E+ Sbjct: 295 HFIGKDNIVFHCIVFPVMLKAHGDFILPDNVPANEFMNLEGDKMSTSRGWSVEMHEYLED 354 Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 + VD LRY+L D + + RVN +L +GN V+R + ++ K YDG + Sbjct: 355 LPAKVDELRYYLTAIAPETSDSEFTWKDYQARVNNELVAILGNFVNRVMILMHKFYDGRV 414 Query: 378 PTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 A + +DES+ + + E++ N + +A ++ + +RY ++PW+ Sbjct: 415 EAETATIDLTDESLKAQIGQFYDELQANFEGYKFRQAQQTMMEIARLGNRYLTEKEPWKS 474 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491 KTNPD A L+ + +I LA LQ F+P A KI +L +A + F + Sbjct: 475 IKTNPDDAKAALHNCLVLIVHLATCLQPFLPGTAKKILHMLNWPKDVIAFDEEVFFANGH 534 Query: 492 RLKPGFML 499 +L P +L Sbjct: 535 QLNPSSLL 542 >gi|218900185|ref|YP_002448596.1| putative methionyl-tRNA synthetase [Bacillus cereus G9842] gi|226695273|sp|B7INU9|SYM_BACC2 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|218544443|gb|ACK96837.1| putative methionyl-tRNA synthetase [Bacillus cereus G9842] Length = 544 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 132/514 (25%), Positives = 237/514 (46%), Gaps = 47/514 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F+ L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCKTCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKTCKLCGSTPSVEET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218 E ++F L +Q ++ E E R+ I +VK GL+D +SR G+ Sbjct: 183 EHFYFALHTFQQQIKKVVEIAKE---KGTWRDNAIQLTERYVKEGLQDRVVSRD-LPIGV 238 Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRF 270 IP +D + +YVWI+A+ Y + + Y G +FW +D +V GKD + F Sbjct: 239 PIPVKGYEDKK--IYVWIEAVAGYYSASKYWAEETGKDDHEFWNSDAQTYYVHGKDNIPF 296 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 H+I WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 297 HSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFL 356 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +D + N++L GN V+R++ I K YDG++P E + Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPQGTINVELKDK 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 + + + + E ++ AL + V ++YFD ++PW+ ++ NP +Y Sbjct: 417 V----EGLYKNVGEAIEQTTFKVALETIFDAVRFANKYFDERQPWKEREDNPVSCEETIY 472 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 + +I A LL+ F+P + ++ L + + N Sbjct: 473 NCIYLIANFANLLEPFLPFSSERVRSTLSIVNRN 506 >gi|322692016|ref|YP_004221586.1| methionyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217] gi|320456872|dbj|BAJ67494.1| methionyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217] Length = 616 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 148/526 (28%), Positives = 245/526 (46%), Gaps = 66/526 (12%) Query: 9 ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A+ G+ Sbjct: 1 MNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGL 60 Query: 68 TTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY-- 124 T + ++ +R +D+ D L +SYD F RTT H + ++K+ + G IYKG Sbjct: 61 TAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQQV 119 Query: 125 ----SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QWME 161 S +L D + + +GA G +A N PV ++ + Sbjct: 120 AISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFEQ 179 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIK 219 E YF L A + ++ E+ + R VI+F K++ T DWGI Sbjct: 180 TEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWGIP 233 Query: 220 IP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGKDI 267 +P D+P +YVW DA+ YL+ + G K+ W D + +GKD Sbjct: 234 VPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDN 293 Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 + FH+ WP+ +L+ N L LP++V + F+ +G+K S S G VI Sbjct: 294 ITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYV 353 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +++ VDA+RY++ D + + N +LA+ GNLV+R ++I K++ Sbjct: 354 KDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNF 413 Query: 374 DGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 G IP + T D +L S + +++ AL++ + +V ++++Y A Sbjct: 414 -GEIPPLDEDSMTNEDRGLLEESSAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISAT 472 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +PW++K + R TVL+V + + LL F+P A K+++ L Sbjct: 473 EPWKIKD-DQARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEAL 517 >gi|239996319|ref|ZP_04716843.1| methionyl-tRNA synthetase [Alteromonas macleodii ATCC 27126] Length = 675 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 145/554 (26%), Positives = 241/554 (43%), Gaps = 68/554 (12%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ ++ +++A+ Y N H+GH E I D+ RF RL G + D HG + Sbjct: 1 MSEKRRILVTSALPYANGSIHLGHLLEHIQTDIWTRFQRLRGNECYSVCADDAHGTPVML 60 Query: 61 AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AQ G+T + V + + + +D+ D + YD++ T + C ++ ++ + G I Sbjct: 61 KAQELGITPEEMVARTRAEHHQDLVD-FHVDYDNYYVTHSPENKALCEEIYTRLDNAGYI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQ------YYNAQHNPVQ---------- 158 K + + E + D V GA+ Q A ++P + Sbjct: 120 SKRTINQLFDPEKEMFLPDRFVKGTCPSCGAEDQNGDSCDVCGATYSPTEVKNPRSVVSG 179 Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E E +FF L ++ L + S L E N++ + GL+ +SR Sbjct: 180 ATPVLRESEHFFFDLPKFEGMLKEWIRSG---ALQEEMANKLQEWFTEGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268 +G +IP P YVW+DA Y+ + + D + FW AD H IGKDI Sbjct: 237 YFGFEIPGAPNKFFYVWVDAPVGYMASFKNFCDQNNLEFDDFWKADSEAELYHFIGKDIT 296 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH ++WPA L A P V HGF+ G K+SKS G I ++ + + LRY+ Sbjct: 297 YFHCLFWPAMLEGAGYRKPTGVNIHGFVTVNGAKMSKSRGTFIKGRTYLDHLNPEYLRYY 356 Query: 329 LVREIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---- 380 ++ DG D D ++VN+DL + N+ SR S I K +DG + Sbjct: 357 FASKLG---DGVTDIDLNFTDFAQKVNSDLVGKVVNIASRCASFITKRFDGKLSENVIEP 413 Query: 381 ---GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 F + ESI ++ + + H+A+ ++++L + +++ D PW Sbjct: 414 ELIAEFQNASESIAAL-----------FEKRKYHQAVREIMALADKANQFIDNNAPWVTI 462 Query: 438 KTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495 K + T V + + + R L I L+ +P LA K + L ++ + SL LK Sbjct: 463 KDEAKQQFTHDVCSLGINMFRLLVIYLKPVLPVLAEKAEEFL---NDKFDWNSLQTLLK- 518 Query: 496 GFMLHKTFDPIFPR 509 G ++K F P+ R Sbjct: 519 GHAINK-FKPMMQR 531 >gi|167763880|ref|ZP_02436007.1| hypothetical protein BACSTE_02261 [Bacteroides stercoris ATCC 43183] gi|167697996|gb|EDS14575.1| hypothetical protein BACSTE_02261 [Bacteroides stercoris ATCC 43183] Length = 680 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 145/516 (28%), Positives = 247/516 (47%), Gaps = 49/516 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DV+F G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVVFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + IS+D + RTT K HHDT ++K+ DKG+ Sbjct: 63 RAKKEGITPQDVVDRYHTLIKKSFEEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + A+G Y + + Sbjct: 123 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210 PV E + ++ L ++ L + E H E+ R N + S++ GL+ ++S Sbjct: 183 QPVM-RETKHWYLPLDKHEAWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236 Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIG 264 R DWGI +P + ++YVW DA Y++ T L PD S K+W +H IG Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLVHFIG 293 Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--G 321 KD + FH I +PA L + + LP V S+ F+ +G+KIS S + E +E+ Sbjct: 294 KDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPGK 353 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D LRY L KD + + R N +L GN V+R++ + K +DG++P G Sbjct: 354 QDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGVVPAAG 413 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 + D L + V +E+ + + A + ++L ++Y +PW+L KT+ Sbjct: 414 ELNDYDRETLKEFADVKEEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDM 473 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 R +T+L ++++++ LAI + F+P + K+ +L Sbjct: 474 PRVATILNISLQLVANLAIAFEPFLPFSSEKLRKML 509 >gi|330898584|gb|EGH30003.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 682 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 139/546 (25%), Positives = 237/546 (43%), Gaps = 49/546 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D AD L + +D+F T + + +++K++ D G I Sbjct: 61 RAEKEGITPEQLIANVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYKRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164 + ++ + + D KG A+ QY A + P + + Sbjct: 120 ATRSVTQYFDPEKKMFLA-DRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAIS 178 Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 +FF L A+ L + S L N++ ++ SGL+ +SR Sbjct: 179 GATPVLKDSKHFFFDLPAFDAMLKRWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266 +G +IPD+P YVW+DA Y+ + L PD +W H IGKD Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A+L P + HG++ G+K+SKS G I ++ + + LR Sbjct: 296 IVNFHALFWPAMLEGADLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPE 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDR 443 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGRQDE 471 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLDQRLKPGFMLH 500 V + + + RQL I L+ +P LA L V E+ + +L P L Sbjct: 472 VQAVCALGINLFRQLVIFLKPVLPNLAADAEKFLHVEPLTWEDHKILLTNHQLNPFSALM 531 Query: 501 KTFDPI 506 DP+ Sbjct: 532 TRIDPV 537 >gi|310288247|ref|YP_003939506.1| Methionyl-tRNA synthetase [Bifidobacterium bifidum S17] gi|309252184|gb|ADO53932.1| Methionyl-tRNA synthetase [Bifidobacterium bifidum S17] Length = 620 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 150/528 (28%), Positives = 244/528 (46%), Gaps = 66/528 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A+ Sbjct: 4 VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ +R +D+ D L +SYD F RTT H + L+K+ G IYKG Sbjct: 64 GLTAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQELFKQCLQNGYIYKGTQ 122 Query: 125 ------SGWYSLRDEAYYNDDEVYK--GADGQYYNAQHN---------PV--------QW 159 S +L D + + GA G +A N PV ++ Sbjct: 123 KVAISPSTGRTLPDRYIEGECPICHADGARGDQCDACGNELDPDELINPVSKINGETPRF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 E E +F L A + L++ ++ + R VI+F K++ T DWG Sbjct: 183 EETEHFFLDLPALAEANLAWLKTRKGW------RTNVINFSIGLFKEVKPRAITRDIDWG 236 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGK 265 I +P D+P +YVW DA+ YL+ + G K+ W D + +GK Sbjct: 237 IPVPVAGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGK 296 Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FH+ WP+ +L+ N L LP++V + F+ +G+K S S G VI Sbjct: 297 DNITFHSQIWPSEMLAYNGKGSKGGETGELGPLNLPEQVVASEFMTMEGKKFSSSRGIVI 356 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 +++ VDA+RY++ D + + N +LA GNLV+R ++I K Sbjct: 357 YVKDILARYPVDAVRYYISIAGPETSDADFTWAEFVRHNNEELAASWGNLVNRVANLINK 416 Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 ++ G IP + T D ++L S EI ++ AL + +V ++++Y Sbjct: 417 NF-GEIPALDEDSMTNEDRALLKETSDAFDEIGALIEKHHQKNALVATMRVVGDINKYIS 475 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A++PW++K + R TVL+V + + LL F+P + K+++ L Sbjct: 476 AEEPWKIKD-DEARLGTVLHVAAQAVYDANHLLAPFLPHASQKVYEAL 522 >gi|254242167|ref|ZP_04935489.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa 2192] gi|126195545|gb|EAZ59608.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa 2192] Length = 678 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 131/520 (25%), Positives = 231/520 (44%), Gaps = 52/520 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF ++ G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAVYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T++ +D + + D AD L + +D++ T + + + ++ K+ D G I Sbjct: 61 RAEREGITSEQLIDAVRAEHMGDFADFL-VDFDNYHSTHSEENRELSSAIYLKLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164 + ++ + + D + G + + A + P + + + Sbjct: 120 DTRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISG 179 Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 YFF+L ++ L + S L N++ ++ SGL+ +SR Sbjct: 180 ATPVLKESLHYFFKLPDFEAMLKQWTRSG---ALQESVANKLAEWLDSGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267 +G +IPD P YVW+DA Y+ + L P+ FW D H IGKDI Sbjct: 237 YFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWGKDSGAELYHCIGKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L A P + HG++ G+K+SKS G + ++ + + LRY Sbjct: 297 VYFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLRY 356 Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGA 382 + ++ G +D + + ++VN+DL + N+ SR I K G++ P P Sbjct: 357 YYASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAP-- 414 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440 +L+ I E + + +RA+ ++++L + + Q PW L K Sbjct: 415 ------ELLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQ 468 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 D+ V + + + RQL I L+ +PKLA L VA Sbjct: 469 QDKVQAVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVA 508 >gi|228961279|ref|ZP_04122898.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798400|gb|EEM45394.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 544 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 133/513 (25%), Positives = 237/513 (46%), Gaps = 45/513 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K DQ F+ L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKTCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKRAVEITKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + Y G +FW + +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKYWAEETGKDDQEFWDREAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + + Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKRSIEVELKDKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + RV + I + AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 EGLYKRVGEAIEQTK----FKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V +I A LL+ F+P + ++ + L + N Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506 >gi|311065111|ref|YP_003971837.1| methionyl-tRNA synthetase [Bifidobacterium bifidum PRL2010] gi|310867431|gb|ADP36800.1| Methionyl-tRNA synthetase [Bifidobacterium bifidum PRL2010] Length = 620 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 150/528 (28%), Positives = 244/528 (46%), Gaps = 66/528 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A+ Sbjct: 4 VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ +R +D+ D L +SYD F RTT H + L+K+ G IYKG Sbjct: 64 GLTAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQELFKQCLQNGYIYKGTQ 122 Query: 125 ------SGWYSLRDEAYYNDDEVYK--GADGQYYNAQHN---------PV--------QW 159 S +L D + + GA G +A N PV ++ Sbjct: 123 KVAISPSTGRTLPDRYIEGECPICHADGARGDQCDACGNELDPDELINPVSKINGETPRF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 E E +F L A + L++ ++ + R VI+F K++ T DWG Sbjct: 183 EETEHFFLDLPALAEANLAWLKTRKGW------RTNVINFSIGLFKEVKPRAITRDIDWG 236 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGK 265 I +P D+P +YVW DA+ YL+ + G K+ W D + +GK Sbjct: 237 IPVPVAGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGK 296 Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FH+ WP+ +L+ N L LP++V + F+ +G+K S S G VI Sbjct: 297 DNITFHSQIWPSEMLAYNGKGSKGGETGELGPLNLPEQVVASEFMTMEGKKFSSSRGIVI 356 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 +++ VDA+RY++ D + + N +LA GNLV+R ++I K Sbjct: 357 YVKDILARYPVDAVRYYISIAGPETSDADFTWAEFVRHNNEELAASWGNLVNRVANLINK 416 Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 ++ G IP + T D ++L S EI ++ AL + +V ++++Y Sbjct: 417 NF-GEIPALDEDSMTNEDRALLKETSDAFDEIGALIEKHHQKNALVAAMRVVGDINKYIS 475 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A++PW++K + R TVL+V + + LL F+P + K+++ L Sbjct: 476 AEEPWKIKD-DEARLGTVLHVAAQAVYDANHLLAPFLPHASQKVYEAL 522 >gi|238789828|ref|ZP_04633609.1| Methionyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] gi|238722024|gb|EEQ13683.1| Methionyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] Length = 675 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 129/504 (25%), Positives = 227/504 (45%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I AD+ RF R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + S+ + ISYD++ T + + ++++++ G I Sbjct: 66 LGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYRRLKANGYIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160 S Y ++ + D KG + + A ++P + + Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A+ D L ++ S L + N++ + +SGL+ ++R +G Sbjct: 185 MRESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDITRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFW----PADL-HVIGKDILRFH 271 ++PD YVW+DA Y+ L + G +FW DL H IGKDI+ FH Sbjct: 242 EVPDATGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWREGSTTDLYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L ++ P +F HG++ G K+SKS G I ++ + D LRY+ Sbjct: 302 SLFWPAILEGSHFRKPTNIFVHGYVTVNGAKMSKSRGTFIKASTYLKHLDADCLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K + G + A +D ++ Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGKL----ADQLADPAL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448 + I E N+ +A+ ++++L +RY D Q PW + K + + Sbjct: 418 YKTFTDAAASIAEAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKEEGRDSDLHAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L + Sbjct: 478 SMGINLFRVLMTYLKPVLPSLTER 501 >gi|255318346|ref|ZP_05359581.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SK82] gi|262379088|ref|ZP_06072244.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SH164] gi|255304658|gb|EET83840.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SK82] gi|262298545|gb|EEY86458.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SH164] Length = 686 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 145/542 (26%), Positives = 237/542 (43%), Gaps = 63/542 (11%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ A+ Y N H+GH I AD+ R R G DV + D HG I A+ G Sbjct: 4 ILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEANG 63 Query: 67 VT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 +T + + + RD + + +D + T + + ++ K + G+I + Sbjct: 64 ITPEEQIANVQKEHIRDF-NGFGVHFDHYDSTNSDTNKARSQEIYIKNREAGNIAVRPVT 122 Query: 126 GWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWME------ 161 + ++ + D KG A G YNA NP + Sbjct: 123 QLFD-PEKGMFLSDRFIKGTCPKCKTEDQYGDSCEACGTTYNATELINPKSTLSGATPVE 181 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + YFF+L + + L ++ LP+ N++ + +GL D +SR +G + Sbjct: 182 KSSDHYFFKLPNFSEYLQTWTRDSGR--LPVSIANKLDEWFDAGLSDWDISRDAPYFGFE 239 Query: 220 IPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDILRFH 271 IPD P YVW+DA Y+++ Y+ PD + FW D H IGKDI+ FH Sbjct: 240 IPDAPDKYFYVWVDAPIGYMSSFENYIQTKRPDLNFDDFWKKDSENEVYHFIGKDIVYFH 299 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 A++WPA L AN P +F +GF+ G+K+SKS G I +E + + LRY+ Sbjct: 300 ALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLEHLNPEYLRYYFAS 359 Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ +D + D ++VN+DL + N+ SR I +D + A E +S Sbjct: 360 KLSDKVEDSDLNLDDFIQKVNSDLVGKVVNIASRCAKFINTKFDHKLSAECAEPELVQSF 419 Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RAST 446 + + + E RE A+ ++++L ++Y D +KPW L K + + Sbjct: 420 IEAGDSIAKAYEARE------FSTAIREIMALADRANQYIDEKKPWALAKIEGEELQVHN 473 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQRL 493 V V + + RQLAI L +P LA ++ D L V E FQ L QR+ Sbjct: 474 VCSVGINLFRQLAIYLAPVLPVLAQQVQDFLKLDSFNFESRKQILVNHEIELFQPLMQRV 533 Query: 494 KP 495 P Sbjct: 534 DP 535 >gi|330949991|gb|EGH50251.1| methionyl-tRNA synthetase [Pseudomonas syringae Cit 7] Length = 682 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 141/548 (25%), Positives = 237/548 (43%), Gaps = 53/548 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D AD L + +D+F T + + +++K++ D G I Sbjct: 61 RAEKEGITPEQLIANVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYKRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164 + ++ + + D KG A+ QY A + P + + Sbjct: 120 ATRSVTQYFDPEKKMFLA-DRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAIS 178 Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 +FF L A+ L S+ S L N++ ++ SGL+ +SR Sbjct: 179 GATPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266 +G +IPD+P YVW+DA Y+ + L PD +W H IGKD Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A L P + HG++ G+K+SKS G I ++ + + LR Sbjct: 296 IVNFHALFWPAMLEGAALRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPE 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDE 471 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADENRCFQSLDQRLKPGFM 498 V + + + RQL I L+ +P LA L V AD + +L P Sbjct: 472 VQAVCALGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWADHKTLLA--NHQLNPFSA 529 Query: 499 LHKTFDPI 506 L DP+ Sbjct: 530 LMTRIDPV 537 >gi|313140646|ref|ZP_07802839.1| methionyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] gi|313133156|gb|EFR50773.1| methionyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] Length = 620 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 150/528 (28%), Positives = 244/528 (46%), Gaps = 66/528 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A+ Sbjct: 4 VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ +R +D+ D L +SYD F RTT H + L+K+ G IYKG Sbjct: 64 GLTAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQELFKQCLQNGYIYKGTQ 122 Query: 125 ------SGWYSLRDEAYYNDDEVYK--GADGQYYNAQHN---------PV--------QW 159 S +L D + + GA G +A N PV ++ Sbjct: 123 KVAISPSTGRTLPDRYIEGECPICHADGARGDQCDACGNELDPDELINPVSKINGETPRF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 E E +F L A + L++ ++ + R VI+F K++ T DWG Sbjct: 183 EETEHFFLDLPALAEANLAWLKTRKGW------RTNVINFSIGLFKEVKPRAITRDIDWG 236 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGK 265 I +P D+P +YVW DA+ YL+ + G K+ W D + +GK Sbjct: 237 IPVPVAGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGK 296 Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FH+ WP+ +L+ N L LP++V + F+ +G+K S S G VI Sbjct: 297 DNITFHSQIWPSEMLAYNGKGSKGGETGELGPLNLPEQVVASEFMTMEGKKFSSSRGIVI 356 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 +++ VDA+RY++ D + + N +LA GNLV+R ++I K Sbjct: 357 YVKDILARYPVDAVRYYISIAGPETSDADFTWAEFVRHNNEELAASWGNLVNRVANLINK 416 Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 ++ G IP + T D ++L S EI ++ AL + +V ++++Y Sbjct: 417 NF-GEIPALDEDSMTNEDRALLKETSDAFDEIGALIEKHHQKNALVAAMRVVGDINKYIS 475 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A++PW++K + R TVL+V + + LL F+P + K+++ L Sbjct: 476 AEEPWKIKD-DEARLGTVLHVAAQAVYDANHLLAPFLPHASQKVYEAL 522 >gi|84394346|ref|ZP_00993068.1| methionyl-tRNA synthetase [Vibrio splendidus 12B01] gi|84375039|gb|EAP91964.1| methionyl-tRNA synthetase [Vibrio splendidus 12B01] Length = 686 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 136/504 (26%), Positives = 222/504 (44%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 +L ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 7 QLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + + ++ ++ G I S Sbjct: 67 GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126 Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160 + E + D D+ D G+ Y+ NP + Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 186 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + E +FF L ++ L + S L E N++ + +SGL+ +SR +G +I Sbjct: 187 DSEHFFFDLPQFESMLKEWTRSGS---LQNETANKMQEWFESGLQQWDISRDAPYFGFEI 243 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273 P + YVW+DA Y+ + L + D + ++W D H IGKDI+ FH++ Sbjct: 244 PGEKNKFFYVWLDAPVGYMASFKNLCDKRDDLNFDEYWKKDSTTELYHFIGKDIVYFHSL 303 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L A P VF HG++ G K+SKS G I + + + LRY+ ++ Sbjct: 304 FWPAMLEGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYYAAKL 363 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + + +RVNAD+ N I NL SR+ I K ++G + A E ++ Sbjct: 364 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLAAEFAEPELYNEFVA 423 Query: 393 VCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 R+ Q E RE RA+ ++ +L + ++Y D + PW L K V Sbjct: 424 AAERIGQLYETRE------FSRAIREITALADKANQYIDEKAPWVLAKEEGKEKELQEVS 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P+LA + Sbjct: 478 SVGINLFRVLMAYLKPVMPELATR 501 >gi|330889575|gb|EGH22236.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020] Length = 682 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 139/546 (25%), Positives = 238/546 (43%), Gaps = 49/546 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +D + + D AD L + +D+F T + + +++ ++ D G I Sbjct: 61 RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160 + ++ + + D KG A+ QY A + P Sbjct: 120 ATRSVTQYFDPEKKMFLAD-RFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAIS 178 Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + + +FF L A+ L S+ S L N++ ++ SGL+ +SR Sbjct: 179 GTTPVLKDSKHFFFDLPAFDAMLKSWRRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266 +G +IPD+P YVW+DA Y+ + L PD +W H IGKD Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A L P + HG++ G+K+SKS G I ++ + + LR Sbjct: 296 IVNFHALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPE 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWVLAKQEGKQDE 471 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500 V + + + RQL I L+ +P L A K ++ + E+ + +L P L Sbjct: 472 VQAVCSLGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHRTLLGNHQLNPFSALM 531 Query: 501 KTFDPI 506 DP+ Sbjct: 532 TRIDPL 537 >gi|259908021|ref|YP_002648377.1| methionyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96] gi|224963643|emb|CAX55140.1| Methionyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96] gi|283477916|emb|CAY73832.1| metG [Erwinia pyrifoliae DSM 12163] Length = 676 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 128/504 (25%), Positives = 225/504 (44%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I AD+ R+ R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + S+ + +ISYD++ T + + + +++ ++ + G I Sbjct: 66 MGMAPEQMIADMSQEHQTDFAGFNISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + +A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPNCQSPDQYGDNCEVCSATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 LRDSEHFFFDLPEFSAMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271 +IP P YVW+DA Y+ + L + G FW D H IGKDI+ FH Sbjct: 242 EIPGAPGKYFYVWLDAPIGYMGSFKNLCDKRGDIDFDAFWRQDSDAELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P +F HG++ G K+SKS G I ++ + D+LRY+ Sbjct: 302 SLFWPAMLEGSQFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K + G + A D ++ Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQLSAEVA----DPAL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 I + ++ RA+ ++++L +RY D Q PW + K A + Sbjct: 418 YQTFIDASNSIAQAWASREFSRAVREIMALADAANRYVDEQAPWVVAKQEGRDAELQAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P LA + Sbjct: 478 SMGINLFRVLMTWLKPVMPSLAER 501 >gi|269138540|ref|YP_003295240.1| methionyl-tRNA synthetase [Edwardsiella tarda EIB202] gi|267984200|gb|ACY84029.1| methionyl-tRNA synthetase [Edwardsiella tarda EIB202] gi|304558556|gb|ADM41220.1| Methionyl-tRNA synthetase [Edwardsiella tarda FL6-60] Length = 682 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 131/504 (25%), Positives = 228/504 (45%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I ADV R+ R+ G V F D HG I AQ Sbjct: 12 KILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNQVHFICADDAHGTPIMLKAQQM 71 Query: 66 GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + S+ + D AD ISYD++ T + + +++ ++ + G I Sbjct: 72 GIAPEQMIAEVSKEHQQDFAD-FQISYDNYHSTHSEENRQLASLIYTRLKENGFIKNRTI 130 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160 S Y ++ + D KG + + A ++P + + Sbjct: 131 SQLYD-PEKGMFLPDRFVKGTCPKCQSADQYGDNCEVCGATYSPTELINPKSVVSGATPI 189 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L ++ L ++ S L + N++ + +SGL+ ++R +G Sbjct: 190 LRESEHFFFDLPSFGAMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDITRDAPYFGF 246 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271 +IPD P YVW+DA Y+ + L + G +W + H IGKDI+ FH Sbjct: 247 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDDYWGKESDAELYHFIGKDIVYFH 306 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G I + + D LRY+ Sbjct: 307 SLFWPAMLEGSGFRKPSNVFVHGYVTVNGAKMSKSRGTFIQARTYLNHLDPDCLRYYYAA 366 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K +DG + T +D ++ Sbjct: 367 KLSDRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFDGQLSD----TLADPAL 422 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 EI + + + +A+ ++++L +RY D Q PW + K A + Sbjct: 423 YQTFVDAAAEIAKAYEARESGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 482 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P L+ + Sbjct: 483 SMGLNLFRVLMTYLKPVLPALSAR 506 >gi|229147584|ref|ZP_04275929.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24] gi|228635874|gb|EEK92359.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24] Length = 544 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 133/513 (25%), Positives = 238/513 (46%), Gaps = 45/513 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K DQ F+ L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKIVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+K+ E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEKIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G +FW ++ +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILESYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + + Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + RV + I + AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 EGLYKRVGEAIEQTK----FKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V +I A LL+ F+P + ++ + L + N Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506 >gi|146306437|ref|YP_001186902.1| methionyl-tRNA synthetase [Pseudomonas mendocina ymp] gi|187647744|sp|A4XS54|SYM_PSEMY RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|145574638|gb|ABP84170.1| methionyl-tRNA synthetase [Pseudomonas mendocina ymp] Length = 678 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 134/548 (24%), Positives = 238/548 (43%), Gaps = 54/548 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E + D+ R+ +L G ++ D HG I Sbjct: 1 MTEARKILVTSALPYANGSIHLGHMLEYVQTDMWVRYQKLRGNQAIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +D + + D AD + +D++ T + + + ++ + DKG I Sbjct: 61 RAEKEGITPEQLIDGVRAEHMADFAD-FGVDFDNYHSTHSQENRELSASIYLALRDKGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWM-------- 160 + ++ + D + GA+ QY A + P + Sbjct: 120 ATRAVTQYFDPEKGMFLADRFIKGSCPKCGAEDQYGDNCEKCGATYTPTELKNPRSAISG 179 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + +FF+L ++ L + S L N++ ++ GL++ +SR Sbjct: 180 AVPVLKESQHFFFKLPDFEAMLKQWTRSG---ALQEAVANKIAEWLDGGLQEWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267 +G +IP +P YVW+DA Y+ + L P+ FW D H IGKDI Sbjct: 237 YFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCSKRPELDFDAFWGKDSTAELYHFIGKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L A P V HG++ G+K+SKS G I ++ + + LRY Sbjct: 297 VNFHALFWPAMLEGAGYRKPTAVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLRY 356 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ G D + + ++VN+DL + N+ SR I K DG++ Sbjct: 357 YYASKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNDGLL----VAANP 412 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 + + I E + + RA+ ++++L + + + PW L K +A Sbjct: 413 EPELWDAFQAAAPSIAEAYEARDFSRAMREIMALADRANAWIADKAPWALNKVEGKQAEV 472 Query: 447 --VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL---DQRLKPGFMLHK 501 + + + + RQL I+L+ +PKLA L V + SL + +L P Sbjct: 473 QEICALGINLFRQLVIMLKPVLPKLAADAEAFLNVKPQTWADLSLPLANHQLNP------ 526 Query: 502 TFDPIFPR 509 F+P+ R Sbjct: 527 -FNPLLTR 533 >gi|307247346|ref|ZP_07529394.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249570|ref|ZP_07531557.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307262950|ref|ZP_07544572.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306856190|gb|EFM88345.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858425|gb|EFM90494.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306871576|gb|EFN03298.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 678 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 132/501 (26%), Positives = 234/501 (46%), Gaps = 43/501 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I A G Sbjct: 1 MLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQG 60 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + +++ + +IS+D++ T + + + ++KK+ G I S Sbjct: 61 ITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVISQ 120 Query: 127 WYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM-------------- 160 + + + D V KG A+ QY + + ++P+ + Sbjct: 121 LFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIVK 179 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E E +FF L +++ L + S L E N++ + +SGL+ +SR +G I Sbjct: 180 ESEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFPI 236 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAIY 274 PD YVW+DA Y+ + L + G +FW D H IGKDI+ FH+++ Sbjct: 237 PDAENKFFYVWLDAPIGYMASFKNLCDRTGLNFDEFWKKDSETELYHFIGKDIVYFHSLF 296 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L L P VF+HG++ G K+SKS G I ++ + + LRY+ ++ Sbjct: 297 WPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKLN 356 Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 +D + +RVN+D+ N + NL SR+ S I K ++G + A DE++ + Sbjct: 357 ERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADKLEDEALFAE 412 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451 ++I + +N+ ++A+ ++ L + ++Y D + PW + K A V + Sbjct: 413 FIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSMG 472 Query: 452 VEVIRQLAILLQAFVPKLANK 472 +E+ R L L+ +P+LA + Sbjct: 473 IELFRVLMSYLKPVLPQLAER 493 >gi|145636862|ref|ZP_01792527.1| putative ATPase [Haemophilus influenzae PittHH] gi|145269943|gb|EDK09881.1| putative ATPase [Haemophilus influenzae PittHH] Length = 682 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 135/503 (26%), Positives = 237/503 (47%), Gaps = 45/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G + F D HG I A Sbjct: 7 KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + RD A +IS+D++ T + + ++ K+ G I Sbjct: 67 GITPEELIAKAKADHIRDFAS-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A++ L + S L E N++ + +SGL+ +SR +G Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272 +IP YVW+DA Y+ + L +G +FW A+L H IGKDI+ FH+ Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF+HG++ G K+SKS G I + + + LRY+ + Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361 Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + +D ++ + +RVN D+ N + NL SR+ I K ++G + A DES+ Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDESLF 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + ++I +++ ++A+ ++++L + ++Y D + PW + K A V Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +PKLA + Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500 >gi|227501490|ref|ZP_03931539.1| methionyl-tRNA synthetase [Corynebacterium accolens ATCC 49725] gi|227077515|gb|EEI15478.1| methionyl-tRNA synthetase [Corynebacterium accolens ATCC 49725] Length = 572 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 142/494 (28%), Positives = 226/494 (45%), Gaps = 64/494 (12%) Query: 40 LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99 + G +VL +GTDEHG + A GV+ + D+ +R + L +SYD F RTT Sbjct: 1 MRGRNVLMVSGTDEHGTPLLVQADKEGVSVRELADRYNRQIVNDLANLGLSYDLFTRTTT 60 Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYS-----------LRDEAYYNDDEVYKGADGQ 148 + H+ + L+K +++ G + K G S + D + +G Sbjct: 61 RNHYSVVQELFKGLNENGYMLKETTKGAISPSTGRTLPDRYIEGTCPICDADGARGDQCD 120 Query: 149 YYNAQHNPV--------------QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194 Q +PV Q++E E + L + +D+L + + ++ R Sbjct: 121 NCGNQLDPVDLIDPVSKINGETPQFVETEHFLLDLPSLKDELQKWLSTREDW------RP 174 Query: 195 EVISFVKSGLKDLSLSRKT--FDWGIKIP-----DDPQYIMYVWIDALTNYLTTT----G 243 V+ F + L+D+ T DWGI IP D+ +YVW DA+ YL+ + Sbjct: 175 NVLKFSLNLLEDMRPRTMTRDIDWGIPIPVDGWQDNNAKKLYVWFDAVVGYLSASIEWAH 234 Query: 244 YLDNPDGSKAKFW--PADLHVI--GKDILRFHAIYWPAFLLS--------------ANLP 285 P+ K +FW P H GKD + FH+ WPA LL L Sbjct: 235 RTGQPEAWK-EFWQDPETRHYYFQGKDNITFHSQIWPAELLGYAGKGSKGGELHQYGELD 293 Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345 LP ++ S ++ G K S S G VI + + E G D LRYF+ D + D Sbjct: 294 LPTEIVSSEYLTMSGSKFSSSKGVVIYVKDFLAEFGPDPLRYFIAVAGPENNDADFTWDE 353 Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405 +RVN +LANG GNLV+R+VSM K++ G +P P A E DE+IL + + Sbjct: 354 FVRRVNNELANGWGNLVNRTVSMAHKNF-GEVPVPAALEERDEAILQLAEETFTTAGNLL 412 Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQ 463 + +A+ ++ +V E + Y +Q+PW+L K T +R +TVL+ ++V+ ++L Sbjct: 413 EQSKFKQAIVSIMHVVGEANAYIASQEPWKLAKDETQRERLATVLWTALQVVSDCNVMLT 472 Query: 464 AFVPKLANKIFDIL 477 F+P A K+ + L Sbjct: 473 PFLPFTAQKVHETL 486 >gi|313200895|ref|YP_004039553.1| methionyl-tRNA synthetase [Methylovorus sp. MP688] gi|312440211|gb|ADQ84317.1| methionyl-tRNA synthetase [Methylovorus sp. MP688] Length = 696 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 137/512 (26%), Positives = 234/512 (45%), Gaps = 47/512 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ RF ++ G V + D HG I A+ Sbjct: 21 KILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGHTVHYVCADDTHGTPIMLRAEKE 80 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + ++ ++ D + L + +D++ T + + ++ ++ G I Sbjct: 81 GITPEQLIAKVHTEHYADFSGFL-VEFDNYYSTNAPENRELASNIYLELKKNGKIATKTI 139 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWM------------ 160 ++ + + D KG A QY ++ ++P + + Sbjct: 140 EQFFDPVKQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYSPTELINPYSAVSGAAPV 198 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E YFF+LS + L + S L E N++ + SGL D +SR +G Sbjct: 199 RKETEHYFFKLSECGEFLQQWTRSG---TLQAEAANKMGEWFASGLSDWDISRDAPYFGF 255 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHA 272 +IPD P YVW+DA Y+ + L + G ++W AD H IGKDIL FHA Sbjct: 256 EIPDAPGKYFYVWLDAPIGYMASFKNLCSRLGLDFDEYWKADSKTELYHFIGKDILYFHA 315 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-GVDALRYFLVR 331 ++WPA L + P ++F+HGF+ GEK+SKS G I ++ V + LRY+ Sbjct: 316 LFWPATLKYSGHRQPTQIFAHGFLTVNGEKMSKSRGTFITAGSYLQHVKNPEYLRYYYAA 375 Query: 332 EI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ +D + D RVN+DL N+ SR+ I K +DG + D ++ Sbjct: 376 KLNGSMEDIDLNLDDFTARVNSDLVGKYINIASRTAGFISKRFDGKLAAL-----VDNAV 430 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448 ++ + I E + RAL ++++L + + Y PW++ K A V Sbjct: 431 ITELRQAASSIAECYNMRDYGRALREIMALADKANGYVAEHAPWDMAKQAGREAELHQVC 490 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +E+ R L + L+ +PKLA +I L +A Sbjct: 491 TAALEMFRLLTLYLKPVLPKLAGQIEAFLNIA 522 >gi|255529999|ref|YP_003090371.1| methionyl-tRNA synthetase [Pedobacter heparinus DSM 2366] gi|255342983|gb|ACU02309.1| methionyl-tRNA synthetase [Pedobacter heparinus DSM 2366] Length = 702 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 139/525 (26%), Positives = 241/525 (45%), Gaps = 59/525 (11%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 ++ A+ Y N HIGH A + AD R+ R + DV F G+DE+G I A+ GV Sbjct: 11 VTAALPYTNGPVHIGHLAGVYLPADTYVRYLRSNKRDVKFICGSDENGVPITLKAKKEGV 70 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T +V VD+ + D +S+D + RT+ HH T ++ + +KG + + Sbjct: 71 TPQVIVDKYHKIIGDSFKEFGVSFDIYHRTSSLMHHQTASDFFETLYNKGVFTEEVTEQY 130 Query: 128 YSLRDEAYYNDDEVYK-----GADGQYYNAQHN--------------------PVQWMEE 162 Y + + + D + G + Y + N P E Sbjct: 131 YDEKAQTFLADRYITGTCPKCGNENAYGDQCENCGSTLNATDLINPKSTLSGEPPVRKET 190 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F L Y+++L Y + H E+ + + S++ +GL+ +++R DWG+K+P Sbjct: 191 RNWFLPLDKYEEQLRKYIDGHKEWKPNV--FGQCQSWLNAGLQPRAMTRD-LDWGVKVPL 247 Query: 222 -DDPQYIMYVWIDALTNYLTTT------GYLD--NPD-------------GSKAKFWPAD 259 D ++YVW DA Y++ T LD NP GS +W + Sbjct: 248 KDAEGKVLYVWFDAPIGYISATKELFEYARLDVWNPKAEEYYINQSEVEKGSWEDYWKDE 307 Query: 260 ----LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 +H IGKD + FH I +PA L++ + L V ++ F+ +G+KIS S + Sbjct: 308 EAKLVHFIGKDNIVFHCIIFPAMLMAHGDYILADNVPANEFLNLEGQKISTSKNWAVWLN 367 Query: 315 EVIEEVG--VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 E +EE D LRY L KD + + R N +L +GN V+R V + K Sbjct: 368 EYLEEFKDKQDVLRYVLTATAPETKDNDFTWKDFQARNNNELVAILGNFVNRVVVLTHKY 427 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 + G +P T D+ ++ + +I +++N AL +V+++ ++Y + Sbjct: 428 FKGKVPMCMHITPEDQQVMDELAAAPAKISASIENYRFREALGEVMNVARLGNKYLADTE 487 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 PW++ KT+ DR T+L +++++ L IL++ F+P A+K+ +L Sbjct: 488 PWKVIKTDEDRVRTILNISLQIAANLEILIEPFLPFTADKLMKML 532 >gi|34540030|ref|NP_904509.1| methionyl-tRNA synthetase [Porphyromonas gingivalis W83] gi|68565991|sp|Q7MXK7|SYM_PORGI RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|34396341|gb|AAQ65408.1| methionyl-tRNA synthetase [Porphyromonas gingivalis W83] Length = 680 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 145/510 (28%), Positives = 239/510 (46%), Gaps = 37/510 (7%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 ++ ++ I+TA+ Y N HIGH A + AD+ AR+ RL G D L G+DEHG IA Sbjct: 3 RQFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLRGRDCLLIGGSDEHGVPIAL 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G T + VD+ + + L IS+D + RTT H T +K + +KG+ Sbjct: 63 KAKAEGCTPQEVVDRYHELIKRSFEGLGISFDIYSRTTSDIHRRTASEFFKTLYEKGEFV 122 Query: 121 KGCYSGWYSLRDEAYYND------------DEVYKG---ADGQYYNAQH--NPVQWMEEE 163 + +Y + + D D Y A G NA +P + Sbjct: 123 EQTSEQYYDEEAKQFLADRYIIGTCPHCSNDRAYGDQCEACGTSLNATDLIDPRSTISGS 182 Query: 164 GYFFRLSAYQDKLLSYYESH-PEFILPIERR------NEVISFVKSGLKDLSLSRKTFDW 216 R + + L +E E+IL + + S++ GL+ ++SR DW Sbjct: 183 APVLRETKHWYLPLDKHEPFLKEWILDGHKEWKSNVYGQCKSWLDMGLQPRAVSRD-LDW 241 Query: 217 GIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRF 270 GI +P + ++YVW DA Y++ T L PD S +W ++ +H IGKD + F Sbjct: 242 GIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-CPD-SWETWWKSEDTRLVHFIGKDNIVF 299 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327 H I +PA L + + LP V ++ F+ +G+KIS S + E +EE D LRY Sbjct: 300 HCIVFPAMLRAEGSFILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLEEFPGKQDVLRY 359 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L KD + + R N +L GN V+R++ + K +DG +P G T+ D Sbjct: 360 VLTANAPETKDNDFTWRDFQARNNNELVAIFGNFVNRALVLTHKYFDGAVPPKGELTDCD 419 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 + + V Q + + AL + ++L ++Y +PW+L KT+ +R +T+ Sbjct: 420 SRTIEEFAAVKQALEHQLDTFHFREALKEAMNLARIGNKYLADTEPWKLAKTDMNRVATI 479 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L +++++ LAI + F+P + K+ +L Sbjct: 480 LNLSLQITANLAIAFEPFLPFSSAKLMSML 509 >gi|70607280|ref|YP_256150.1| methionyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639] gi|76363442|sp|Q4J8M3|SYM_SULAC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|68567928|gb|AAY80857.1| methionyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639] Length = 571 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 146/520 (28%), Positives = 256/520 (49%), Gaps = 51/520 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAA 62 K+ +++A Y NA PH+G+ I+ ADV AR+ RL +V+F +G+DEHG I A Sbjct: 2 KVLVTSAWPYVNAVPHLGNLIGSILSADVFARYARLKYGKENVVFVSGSDEHGTPIEIEA 61 Query: 63 QNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI-------- 113 + + K DQ ++ + + D IS+D++ RT + H + R K+ Sbjct: 62 RKRNIEPKKLTDQAHAYDKKLFIDTWKISFDNYSRTESEVHKEFVRNFLVKLEKYIKVEE 121 Query: 114 -----SDKGDIY------KGC--YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ----HNP 156 +K ++ KG Y G+ R + N + NA+ NP Sbjct: 122 DEIPYCEKDKLFLPDRFIKGVCPYCGFEDARGDQCDNCGRLL--TPRSLVNAKCALCGNP 179 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + + +FF LS + DK+ + S +P ++ +S+VK GL+ S++R W Sbjct: 180 PVFKVTKHWFFDLSEFGDKIRDWISSSS--TMPDNVKSVALSWVKEGLRPRSITRDNM-W 236 Query: 217 GIKIP--DDPQYIMYVWIDALTNYLTTT-GYLDNPDGSK--AKFW----PADLHVIGKDI 267 GI P +YVW +AL YL+ T Y N + +FW + IGKD Sbjct: 237 GIPAPFAGAENKTIYVWFEALLGYLSATVEYFKNLGKEEMWKEFWLYNDTKTYYFIGKDN 296 Query: 268 LRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVD 323 + FHA+ PA L+++N LP + + ++L++G+K SKS +G ID E + + V+ Sbjct: 297 IPFHAVILPAMLMASNEKYNLPSVIAATEYLLYEGQKFSKSRKIGVWID--EADKLMDVE 354 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--G 381 R+ L+R KD + + VN +L + IGN +R +SM+ + YDG++P+P Sbjct: 355 YWRFILIRLRPEEKDTNFTWREALRIVNTELNDDIGNYANRVLSMVKRYYDGVVPSPKEA 414 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 F + D++++++ + + E + I +++ L + Y + + PW L KTN Sbjct: 415 IFNDEDKNLITLIKESPKRMGELFELGKIKAGSEEILKLARSGNLYLNNRAPWSLVKTNK 474 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 + A+ VLY++V +R LAI+L +P ++ ++ L +++ Sbjct: 475 EEANNVLYISVNSLRTLAIMLYPIMPTYSSNLYQQLGLSN 514 >gi|312883697|ref|ZP_07743421.1| methionyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368670|gb|EFP96198.1| methionyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] Length = 686 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 134/503 (26%), Positives = 223/503 (44%), Gaps = 44/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 12 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 71 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + + ++ ++ G I S Sbjct: 72 GLTPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 131 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWME------------ 161 + E + D V KG ++ QY + N P + +E Sbjct: 132 QLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDNCGETYSPTELIEPKSAVSGATPIM 190 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E +FF L ++ L + S L E N++ + +SGL+ +SR +G + Sbjct: 191 KDSEHFFFDLPQFESMLQEWTRSGS---LQTETANKMQEWFESGLQQWDISRDAPYFGFE 247 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILRFHA 272 IP + YVW+DA Y+ + L N D ++W D H IGKDI+ FH+ Sbjct: 248 IPGEKDKFFYVWLDAPIGYMGSFKNLCNKRSDLDFEEYWRKDSTAELYHFIGKDIVYFHS 307 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF HG++ G K+SKS G I +E + + LRY+ + Sbjct: 308 LFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKASTYLEHLDPECLRYYYAAK 367 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + D + + +RVNAD+ N I NL SR+ I K +DG + + T ++ + Sbjct: 368 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGQL----SATCNEPELY 423 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449 + I E + + RA+ ++ +L + ++Y D + PW + K + Sbjct: 424 REFASAADNIAELYETREFSRAIREITALADKANQYVDEKAPWVVAKEEGKEQELQNICS 483 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 V + + + L L+ +P LA + Sbjct: 484 VGINLFKVLMTYLKPVMPALAAR 506 >gi|224283491|ref|ZP_03646813.1| methionyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] Length = 616 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 150/526 (28%), Positives = 243/526 (46%), Gaps = 66/526 (12%) Query: 9 ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A+ G+ Sbjct: 2 VNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGL 61 Query: 68 TTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY-- 124 T + ++ +R +D+ D L +SYD F RTT H + L+K+ G IYKG Sbjct: 62 TAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQELFKQCLQNGYIYKGTQKV 120 Query: 125 ----SGWYSLRDEAYYNDDEVYK--GADGQYYNAQHN---------PV--------QWME 161 S +L D + + GA G +A N PV ++ E Sbjct: 121 AISPSTGRTLPDRYIEGECPICHADGARGDQCDACGNELDPDELINPVSKINGETPRFEE 180 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIK 219 E +F L A + L++ ++ + R VI+F K++ T DWGI Sbjct: 181 TEHFFLDLPALAEANLAWLKTRKGW------RTNVINFSIGLFKEVKPRAITRDIDWGIP 234 Query: 220 IP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGKDI 267 +P D+P +YVW DA+ YL+ + G K+ W D + +GKD Sbjct: 235 VPVAGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDN 294 Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 + FH+ WP+ +L+ N L LP++V + F+ +G+K S S G VI Sbjct: 295 ITFHSQIWPSEMLAYNGKGSKGGETGELGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYV 354 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +++ VDA+RY++ D + + N +LA GNLV+R ++I K++ Sbjct: 355 KDILARYPVDAVRYYISIAGPETSDADFTWAEFVRHNNEELAASWGNLVNRVANLINKNF 414 Query: 374 DGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 G IP + T D ++L S EI ++ AL + +V ++++Y A+ Sbjct: 415 -GEIPALDEDSMTNEDRALLKETSDAFDEIGALIEKHHQKNALVAAMRVVGDINKYISAE 473 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +PW++K + R TVL+V + + LL F+P + K+++ L Sbjct: 474 EPWKIKD-DEARLGTVLHVAAQAVYDANHLLAPFLPHASQKVYEAL 518 >gi|93006420|ref|YP_580857.1| methionyl-tRNA synthetase [Psychrobacter cryohalolentis K5] gi|122989863|sp|Q1QAD0|SYM_PSYCK RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|92394098|gb|ABE75373.1| methionyl-tRNA synthetase [Psychrobacter cryohalolentis K5] Length = 700 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 152/556 (27%), Positives = 251/556 (45%), Gaps = 60/556 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 MK RE L +++A+ Y N H+GH E I D+ R + G V + D HG I Sbjct: 1 MKVREIL-VTSALPYANGDIHLGHLVEYIQTDIWVRSMKAQGHKVTYVCADDAHGTAIML 59 Query: 61 AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A++ GVT + + + + D A L I++D++ T + + + ++++++ D G I Sbjct: 60 KAEDNGVTPEQQIANVQAAHEADFAKFL-INFDNYHSTHSEENREFSELIYRRLRDAGHI 118 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME 161 + + + D V KG A QY Y+A NP + Sbjct: 119 STRDVEQLFDPEKQLFLADRFV-KGTCPECAATDQYGDNCEVCGTTYDATELKNPYSTLS 177 Query: 162 --------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + YFF L ++ L + S L N++ + +GL +SR Sbjct: 178 NATPILKTSKHYFFDLPEFEQFLKDWTRSDNR--LQTSVANKLQEWFDAGLTSWDISRDA 235 Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAK-----FWPAD---- 259 +G +IPD +P YVW+DA Y+ + L D G++ +W + Sbjct: 236 PYFGFQIPDTPSDEPDKYFYVWLDAPVGYMASFQNLCDKRAGTEEALDFDHYWAQENEHK 295 Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316 H IGKDI+ FHA++WPA L + L P VF+HGF++ GEK+SKS G I Sbjct: 296 TEVYHFIGKDIVYFHALFWPAMLAGSELRTPTGVFAHGFLMVNGEKMSKSRGTFIKADTY 355 Query: 317 IEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 E + + LRY+ +++ +D D + ++VN+DL + N+ SRS ++K YDG Sbjct: 356 AEHLHPEYLRYYFASKLSDKVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFLVKKYDG 415 Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 M+ A + S+L ++ EI +N+ RA+ ++ + + Y D +KPW Sbjct: 416 MLTDVCA----EPSLLEDITKTGDEIAAAYENREFSRAMRLIMQCADKANEYIDDKKPWA 471 Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493 L K V V + + RQL + L +P+L + L + D F S ++ L Sbjct: 472 LAKVEGAEQEVQDVCSVAINIFRQLMVYLAPVLPELTANAKEFLNIDD--LSFASRNEWL 529 Query: 494 KPGFMLHKTFDPIFPR 509 G ++K F P+ R Sbjct: 530 L-GHQINK-FKPLMQR 543 >gi|70732169|ref|YP_261925.1| methionyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] gi|123762009|sp|Q4K758|SYM_PSEF5 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|68346468|gb|AAY94074.1| methionyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] Length = 681 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 132/516 (25%), Positives = 228/516 (44%), Gaps = 44/516 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF +L G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D A+ L + +D+F T + + + ++ K+ D G I Sbjct: 61 RAEKEGITPEQLIANVQAEHCADFAEFL-VDFDNFHSTHAEENRELSSQIYLKLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQ---------- 158 + ++ + + D + G + QY A + P Sbjct: 120 ATRSITQYFDPEKKMFLADRFIKGTCPKCGTEDQYGDNCEKCGATYAPTDLKDPKSAISG 179 Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + + +FF+L +Q L S+ S L N++ ++ +GL+ +SR Sbjct: 180 ATPVLKDSQHFFFKLPDFQQMLQSWTRSG---TLQDAVANKIAEWLDAGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDI 267 +G +IPD+P YVW+DA Y+ + L + P+ FW D H IGKDI Sbjct: 237 YFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCSRRPELDFDAFWGKDSTAELYHFIGKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L A P + HG++ G+K+SKS G I +E + + LRY Sbjct: 297 VNFHALFWPAMLEGAGYRKPTGINVHGYLTVNGQKMSKSRGTFIKARTYLEHLSPEYLRY 356 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 357 YYASKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVMVDSNAAPEL 416 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRA 444 E+ L+ I + + + RA+ +++ L + + + PW L K D Sbjct: 417 TEAFLAAAP----SIADAYEARDFARAMREIMGLADRANAWIADKAPWSLNKQEGKQDEV 472 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 + + + RQL I L+ +P LA L VA Sbjct: 473 QAICATGIILFRQLVIFLKPVLPLLAADAEAFLNVA 508 >gi|329956546|ref|ZP_08297143.1| methionine--tRNA ligase [Bacteroides clarus YIT 12056] gi|328524443|gb|EGF51513.1| methionine--tRNA ligase [Bacteroides clarus YIT 12056] Length = 680 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 145/516 (28%), Positives = 246/516 (47%), Gaps = 49/516 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DV+F G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVVFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + IS+D + RTT K HHDT ++K+ DKG+ Sbjct: 63 RAKKEGITPQDVVDRYHTLIKKSFEEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + A+G Y + + Sbjct: 123 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210 PV E + ++ L ++ L + E H E+ R N + S++ GL+ ++S Sbjct: 183 QPVM-RETKHWYLPLDKHEAWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236 Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIG 264 R DWGI +P + ++YVW DA Y++ T L PD S K+W +H IG Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLVHFIG 293 Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--G 321 KD + FH I +PA L + + LP V S+ F+ +G+KIS S + E + E Sbjct: 294 KDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLAEFPGK 353 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D LRY L KD + + R N +L GN V+R++ + K +DG++P G Sbjct: 354 QDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGVVPAAG 413 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 + D L + V +E+ + + A + ++L ++Y +PW+L KT+ Sbjct: 414 ELNDYDRETLKEFADVKEEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDM 473 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 R +T+L ++++++ LAI + F+P + K+ +L Sbjct: 474 PRVATILNISLQLVANLAIAFEPFLPFSSEKLRKML 509 >gi|59712361|ref|YP_205137.1| methionyl-tRNA synthetase [Vibrio fischeri ES114] gi|68565957|sp|Q5E3Z7|SYM_VIBF1 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|59480462|gb|AAW86249.1| methionyl-tRNA synthetase [Vibrio fischeri ES114] Length = 686 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 147/541 (27%), Positives = 233/541 (43%), Gaps = 62/541 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ R+ RL G DV F D HG I AQ Sbjct: 7 KILVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNDVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G++ + + S + DIS+D++ T + + ++ ++ G I S Sbjct: 67 GISPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFITSRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN---------------------PVQ 158 + E + D V KG A+ QY + N PV Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPVM 185 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + +SGL+ +SR +G Sbjct: 186 -KDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L N D + ++W D H IGKDI+ FH Sbjct: 242 EIPGETNKFFYVWLDAPIGYMGSFKNLCNKRDDLNFDEYWKKDSTTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L A P VF HG++ G K+SKS G I + + + LRY+ Sbjct: 302 SLFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLNHLDPECLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVN+D+ N I NL SR+ I K +DG + E Sbjct: 362 KLNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFITKRFDGKLADNFVEPELYNEF 421 Query: 391 LSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446 ++ R+ L E RE RA+ ++ +L + ++Y D + PW L K Sbjct: 422 IAAADRIAELYETRE------FGRAIREITALADKANQYIDEKAPWVLAKEEGKEQELQE 475 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL------------FVADENRCFQSLDQRLK 494 V V + + R L L+ +P+LA + L VA E F++L R+ Sbjct: 476 VSSVGINLFRVLMAYLKPVMPELAARTEAFLNETLTWEGVAQPLVAHEITKFKALFARID 535 Query: 495 P 495 P Sbjct: 536 P 536 >gi|284161342|ref|YP_003399965.1| methionyl-tRNA synthetase [Archaeoglobus profundus DSM 5631] gi|284011339|gb|ADB57292.1| methionyl-tRNA synthetase [Archaeoglobus profundus DSM 5631] Length = 661 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 135/502 (26%), Positives = 232/502 (46%), Gaps = 43/502 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N + HIGH I ADV R+ RL G VLF G+D HG I A+ G++ Sbjct: 4 VTCGLPYANGKAHIGHLRTYIPADVYVRYLRLLGEKVLFICGSDCHGTPIVVNAEKEGIS 63 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 K VD+ +F+ + L++ +D + RT + +H + + K + DKG IY Y Sbjct: 64 PKELVDRYHEHFQKVFKELEVEFDFYGRTDAEYNHRRTQEIVKTLMDKGYIYAKEIELAY 123 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQH---------------NPVQWMEEE 163 + + + D V +G + +H +P + +++ Sbjct: 124 CPKCDRFLPDRYVEGICPYCGAVARGDECDQGCGRHLEPGEILQPKCKICGSPAVFKKQK 183 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 YFF+L+A++D L+ Y E+ + N +V+ LKD ++R +WG+K P + Sbjct: 184 HYFFKLTAFKDFLMDYLENKLQGTS--NALNYAREWVRRELKDWCITR-NLEWGVKFPGE 240 Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWP----ADL-HVIGKDILRFHAIYWPA 277 ++YVW+DA Y++ T G + W +D+ H IG DI+ H I+WPA Sbjct: 241 -NLVVYVWVDAPIGYISFTEQACKLKGCNWEDIWKNGEISDITHFIGLDIVYHHCIFWPA 299 Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIAC 335 L A+ LPK V + G + +G+ SKS G V+ + + G D LRY++V + Sbjct: 300 MLKGADYSLPKAVVASGMVKVEGKTFSKSRGYVVWVEDDYLKAGFHPDYLRYYIVSYTSH 359 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 KD + K +VN +L GN + R + K++ + D+ L S Sbjct: 360 EKDLNFSWRVFKDKVNNELIGTFGNFIYRVLHFAWKNFGRV------RMNVDKETLEKIS 413 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 V +I E+++ + L + + +F ++KPWEL KTN + VL ++++ Sbjct: 414 NVKDKIVESLKVWEFKEICDAFMELATFGNEFFQSKKPWELIKTNREECERVLANAIQLV 473 Query: 456 RQLAILLQAFVPKLANKIFDIL 477 + L I +PK + ++ Sbjct: 474 KALLIFAYPVMPKSMENVAKVI 495 >gi|301156172|emb|CBW15643.1| methionyl-tRNA synthetase [Haemophilus parainfluenzae T3T1] Length = 682 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 135/503 (26%), Positives = 238/503 (47%), Gaps = 45/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G + F D HG I A Sbjct: 7 KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + RD A +IS+D++ T + + ++ K+ KG I Sbjct: 67 GITPEELIAKAKADHVRDFAG-FNISFDNYHSTHSEENKQLTADIYNKLKTKGFIKTKVI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPI 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A++ L + S L E N++ + +SGL+ +SR +G Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272 +IP YVW+DA Y+ + L +G +FW A+L H IGKDI+ FH+ Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWGENSDAELYHFIGKDIVYFHS 301 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF+HG++ G K+SKS G I + + + LRY+ + Sbjct: 302 LFWPAMLEGSEFRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361 Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + +D ++ + +RVN D+ N + NL SR+ I K ++G + A DE++ Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFITKRFEGKL----ADKLEDEALF 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + ++I +++ ++A+ ++++L + ++Y D + PW + K A V Sbjct: 418 AEFTVQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +PKLA + Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500 >gi|145634394|ref|ZP_01790104.1| putative ATPase [Haemophilus influenzae PittAA] gi|145268374|gb|EDK08368.1| putative ATPase [Haemophilus influenzae PittAA] Length = 682 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 135/503 (26%), Positives = 237/503 (47%), Gaps = 45/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G + F D HG I A Sbjct: 7 KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + RD A +IS+D++ T + + ++ K+ G I Sbjct: 67 GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A++ L + S L E N++ + +SGL+ +SR +G Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272 +IP YVW+DA Y+ + L +G +FW A+L H IGKDI+ FH+ Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF+HG++ G K+SKS G I + + + LRY+ + Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361 Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + +D ++ + +RVN D+ N + NL SR+ I K ++G + A DES+ Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDESLF 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + ++I +++ ++A+ ++++L + ++Y D + PW + K A V Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +PKLA + Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500 >gi|322690077|ref|YP_004209811.1| methionyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F] gi|320461413|dbj|BAJ72033.1| methionyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F] Length = 616 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 147/526 (27%), Positives = 245/526 (46%), Gaps = 66/526 (12%) Query: 9 ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A+ G+ Sbjct: 1 MNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGL 60 Query: 68 TTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY-- 124 T + ++ +R +D+ D L +SYD F RTT H + ++K+ + G IYKG Sbjct: 61 TAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQQV 119 Query: 125 ----SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QWME 161 S +L D + + +GA G +A N PV ++ + Sbjct: 120 AISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFEQ 179 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIK 219 E YF L A + ++ E+ + R VI+F K++ T DWGI Sbjct: 180 TEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWGIP 233 Query: 220 IP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGKDI 267 +P D+P +YVW DA+ YL+ + G K+ W D + +GKD Sbjct: 234 VPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDN 293 Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 + FH+ WP+ +L+ N L LP++V + F+ +G+K S S G VI Sbjct: 294 ITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYV 353 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +++ VDA+RY++ D + + N +LA+ GNLV+R ++I K++ Sbjct: 354 KDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNF 413 Query: 374 DGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 G IP + T D +L S + +++ AL++ + +V ++++Y A Sbjct: 414 -GEIPPLDEDSMTNEDRGLLEESSAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISAT 472 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +PW++K + R TVL+V + + LL F+P A ++++ L Sbjct: 473 EPWKIKD-DQARLGTVLHVAAQAVSDANHLLAPFLPHSAQRVWEAL 517 >gi|229845332|ref|ZP_04465464.1| methionyl-tRNA synthetase [Haemophilus influenzae 6P18H1] gi|229811785|gb|EEP47482.1| methionyl-tRNA synthetase [Haemophilus influenzae 6P18H1] Length = 682 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 135/503 (26%), Positives = 237/503 (47%), Gaps = 45/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G + F D HG I A Sbjct: 7 KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + RD A +IS+D++ T + + ++ K+ G I Sbjct: 67 GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A++ L + S L E N++ + +SGL+ +SR +G Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272 +IP YVW+DA Y+ + L +G +FW A+L H IGKDI+ FH+ Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF+HG++ G K+SKS G I + + + LRY+ + Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361 Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + +D ++ + +RVN D+ N + NL SR+ I K ++G + A DES+ Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDESLF 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + ++I +++ ++A+ ++++L + ++Y D + PW + K A V Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +PKLA + Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500 >gi|119719527|ref|YP_920022.1| methionyl-tRNA synthetase [Thermofilum pendens Hrk 5] gi|187647776|sp|A1RXT9|SYM_THEPD RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|119524647|gb|ABL78019.1| methionyl-tRNA synthetase [Thermofilum pendens Hrk 5] Length = 565 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 142/536 (26%), Positives = 244/536 (45%), Gaps = 49/536 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K R K + A Y PH+G+ ++ ADV ARF RL G +V+F +G+D HG I Sbjct: 4 KARRKWLVLAAWPYAYGVPHLGNLIGSVLSADVAARFLRLAGDEVVFVSGSDMHGTPIEV 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A G + K ++N +++ + +IS+D++ +T H + ++++ + G ++ Sbjct: 64 EALKRGESPKDLAERNHEKIKELFERWEISFDNYSKTESPTHIKFVQDFYRRVYENGYVF 123 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWME-------------- 161 +Y +D+ + D + Y G D Y + N + +E Sbjct: 124 SDTVQLYYCPKDKIFLPDRYIVGTCPYCGYDRAYGDQCENCGRLLEPTLLLNPRCAICGS 183 Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 +FF L D L Y E + LP RN + ++ GLK +L+R Sbjct: 184 TPELRTTTHWFFDLPKLTDALKRYIEENEN--LPPNARNMSLQILRDGLKPRALTRDN-K 240 Query: 216 WGI--KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FW----PADLHVIGKD 266 WGI P +YVW++A+ Y++ T G K FW ++ IGKD Sbjct: 241 WGIPAPFPGAEDKTIYVWMEAVLGYISATIEYFASKGEPEKWKEFWLDPETRSVYFIGKD 300 Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGV 322 + FH + PA L+++ LP V S ++L +G K SKS +G ID E +E Sbjct: 301 NIPFHTLILPALLIASGEKYVLPWTVASTEYLLFRGLKFSKSRRIGVWID--EALEVFPA 358 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R+ LV KD + + + VN DL + IGN V R + ++ + + G+ P P Sbjct: 359 DYWRFVLVSLRPEQKDMSFTWEEFLRIVNNDLNDNIGNFVHRVLVLVQRKFGGIAPAPLD 418 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 F + D +E+ E M AL ++ L S + Y + +KPWEL + + Sbjct: 419 FADEDLKFREEILARSREVAEFMYAFRFKEALTHILWLSSSGNSYLNFRKPWEL---DSE 475 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPG 496 A T ++ + ++ LAI+L +P+ + +++ +L D+ N + +++ + PG Sbjct: 476 SARTPAFLALHAVKALAIMLYPIIPRSSQEMWKLLGYKDDIANHRWHEINEAVPPG 531 >gi|319940893|ref|ZP_08015231.1| methionyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B] gi|319805609|gb|EFW02397.1| methionyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B] Length = 685 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 152/526 (28%), Positives = 246/526 (46%), Gaps = 54/526 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 MK+R KL+++TA+ Y N H+GH E I AD+ R R+ G V F D HG I Sbjct: 1 MKQR-KLFVTTALPYANGAFHMGHIMEYIQADIWVRHERMCGHIVHFVGADDVHGAPIMI 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AAQ G+T + FV + + + + IS+D + T +H+ + +++++ + G IY Sbjct: 60 AAQKRGLTPQAFVAEIAAGRKQYLEGFHISHDYWGSTDSPENHELSQEIYRRLKNAGLIY 119 Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME-------- 161 +Y + D + GA QY +A ++P + + Sbjct: 120 TKDVEQFYDTVKGMFLADRFIKGTCPRCGAPDQYGDNCEKCSAVYSPTEVINPYSTLSGS 179 Query: 162 ------EEGYFFRLSAYQ--DKLLSYYESHPEFILPIERRNEVIS------FVKSGLKDL 207 YFF+LS + L + + + LP + EV++ L D Sbjct: 180 RPELRTSTHYFFKLSDPECVKFLREWTTGNGKDGLP-RVQEEVLAKDSEWLGTDGHLTDW 238 Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHV 262 +SR +GI IPD P YVW+DA YL G + +D +H Sbjct: 239 DISRDAPYFGIAIPDAPGKYFYVWLDAPVGYLAALKAYSEKKGFDFNEFLSDPETEQVHF 298 Query: 263 IGKDILRFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 IGKDI+ FH ++WPA L + P P + +HGF+ G+K+SKS G I P++ + ++ Sbjct: 299 IGKDIIYFHTLFWPAMLHFSGKPFRTPDHINAHGFMTVDGQKMSKSRGTGISPLQYL-DL 357 Query: 321 GVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 G++A LRY+L ++ +D + K +RVN+DL N+ SR+ I+K ++G I Sbjct: 358 GMNAEWLRYYLAAKMNSRVEDVDFTKVDFAQRVNSDLIGKYINIASRAAGFIVKRFEGRI 417 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 D I + SRV E+ + + RA V+ L V+ Y D +KPWEL Sbjct: 418 LDAAM---KDPLIERIKSRV-PEVSAFYEVREFARATRLVMELADAVNEYVDEKKPWELA 473 Query: 438 KTNPDRASTVLYVT---VEVIRQLAILLQAFVPKLANKIFDILFVA 480 K +P +A + +V+ +E R L + L+ +P A ++ L +A Sbjct: 474 K-DPAQAEALHWVSSVALECFRLLTLCLKPVLPATAERVEAFLSIA 518 >gi|86147931|ref|ZP_01066235.1| methionyl-tRNA synthetase [Vibrio sp. MED222] gi|85834256|gb|EAQ52410.1| methionyl-tRNA synthetase [Vibrio sp. MED222] Length = 686 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 136/504 (26%), Positives = 222/504 (44%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 +L ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 7 QLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + + ++ ++ G I S Sbjct: 67 GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126 Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160 + E + D D+ D G+ Y+ NP + Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 186 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + E +FF L ++ L + S L E N++ + +SGL+ +SR +G +I Sbjct: 187 DSEHFFFDLPQFESMLKEWTRSGS---LQNETANKMQEWFESGLQQWDISRDAPYFGFEI 243 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273 P + YVW+DA Y+ + L + D + ++W D H IGKDI+ FH++ Sbjct: 244 PGEKNKFFYVWLDAPVGYMASFKNLCDKRDDLNFDEYWKKDSTTELYHFIGKDIVYFHSL 303 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L A P VF HG++ G K+SKS G I + + + LRY+ ++ Sbjct: 304 FWPAMLEGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYYAAKL 363 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + + +RVNAD+ N I NL SR+ I K ++G + A E ++ Sbjct: 364 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSAEFAEPELYNEFVA 423 Query: 393 VCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 R+ Q E RE RA+ ++ +L + ++Y D + PW L K V Sbjct: 424 AAERIGQLYETRE------FSRAIREITALADKANQYIDEKAPWVLAKEEGKEKELQEVS 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P+LA + Sbjct: 478 SVGINLFRVLMAYLKPVMPELAAR 501 >gi|14601199|ref|NP_147731.1| methionyl-tRNA synthetase [Aeropyrum pernix K1] gi|7388281|sp|Q9YCY3|SYM_AERPE RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|5104799|dbj|BAA80114.1| methionyl-tRNA synthetase [Aeropyrum pernix K1] Length = 572 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 150/549 (27%), Positives = 252/549 (45%), Gaps = 52/549 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K +++A Y N PH+G ++ AD+ AR+ RL G V+F +G+DEHG I A+ Sbjct: 3 KYVVTSAWPYVNHVPHLGTLIGSVLSADIYARYLRLRGRQVVFVSGSDEHGTPIELEARK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV K DQ M IS+D++ RT H + KK+ + G I+ Sbjct: 63 KGVHPKELTDQVHEYDVKMWREYRISFDNYSRTESPVHKEFVMEFMKKLEENGYIFSQEE 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYN------------------AQHNPVQ 158 Y RD+ + D V Y+ A G + PV Sbjct: 123 VLPYCERDKIFLPDRFVEGTCPYCGYEKARGDQCDECGRLLHPTELKNPRCALCGSKPV- 181 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + +F L QD+LL + ESH E +++ + I++V GLK S++R WG+ Sbjct: 182 YKSTRHWFIDLRRVQDRLLKWLESHGELQDSVKKYS--INWVAQGLKPRSVTRD-LSWGV 238 Query: 219 KIP--DDPQYIMYVWIDALTNYLTTTGYL-----DNPDGSKAKFWPAD---LHVIGKDIL 268 P +YVW DAL Y++ T L +P+ K+ +W + ++ IGKD + Sbjct: 239 PAPFKGAEGKTIYVWFDALLGYVSATKELFIMRRGDPEEWKSWWWDSGTRTVYFIGKDNI 298 Query: 269 RFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDA 324 FHAI PA L+++ P LP ++ + +++++G++ SKS +G ID E +E D Sbjct: 299 PFHAIILPALFLASHDPYVLPWRISATEYLMYEGQQFSKSRRIGVWID--EALEIAPADY 356 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 R+ L R +D + + VN +L + IGN V+R +S++ G+ P P Sbjct: 357 WRWALARMRPEARDTNFTWKEFYRIVNTELNDDIGNFVNRVLSLVRSRMSGVAPEPEDLG 416 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 E + + R + E+++ I RA ++ + E + Y + +PW+L + + Sbjct: 417 EH-QGFVERVRRAAWAVAEDLEAIRIKRATEGILEIAREGNAYLNRTQPWKLLSQDREEG 475 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLDQRLKPGFMLHK 501 L + ++ LA LL F P A++++ +L +A E + LD+ L PG Sbjct: 476 VRALSAALYAVKTLAHLLAPFTPDAADRLWSMLGLAGSVHEAVWDEWLDRPL-PGGARIV 534 Query: 502 TFDPIFPRF 510 +P+F + Sbjct: 535 RVEPLFQKL 543 >gi|33415345|gb|AAQ18197.1| probable methionyl-tRNA synthetase [uncultured bacterium] Length = 701 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 151/534 (28%), Positives = 241/534 (45%), Gaps = 67/534 (12%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 +L+++TA+ Y N HIGH E I AD+ RF R G V F D HG I AA+ A Sbjct: 4 QLFVTTALPYANGHFHIGHIMEYIQADIWVRFQRQQGHRVHFVGADDAHGAPIMIAAEKA 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T + FV + + D I++D + T +H + ++ + D G I Sbjct: 64 GKTPQQFVADIAAGRKPYLDGFHIAFDHWSSTDSPENHSLAKEIYVALRDAGLITVRPVE 123 Query: 126 GWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME------- 161 ++ + D E K GA QY ++ NP + Sbjct: 124 QFFDPEKSMFLPDRFIKGECPKCGAKDQYGDSCEVCGAVYAPTDLKNPYSALSGATPVRK 183 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPE-FILPIERRNEVISFV------KSGLKDLSLSRKT 213 + YFF+LS + + E+ + L E N++ + + GL D +SR Sbjct: 184 SSDHYFFKLS--DPRCAEFLEAWTQDGKLQSEVGNKIREWFTKDENGEGGLSDWDISRDA 241 Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA----------- 258 +GI+IPD P YVW+DA YL + G KA++ A Sbjct: 242 PYFGIQIPDLPEGSPAKYFYVWLDAPVGYLASLKSYFAAGGPKARYGEARSFDEFIADPA 301 Query: 259 --DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316 +H IGKDI FH ++WPA L + LP +V HG + GEK+SKS G +DPI+ Sbjct: 302 VEQVHFIGKDITYFHTLFWPAMLKFSGRKLPSQVNVHGHLTVGGEKMSKSRGTGLDPIKY 361 Query: 317 IEEVGVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 + ++G++ LRY++ ++ +D ++ + RVN+DL N+ SR + I K + Sbjct: 362 L-KLGMNPEWLRYYIAAKLNSKVEDVDFNPEDFVARVNSDLVGKYVNIASRCSTFIHKYF 420 Query: 374 DGMI-----PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428 +G + P G E + +V SR Q I + + + +AL +++ E+++YF Sbjct: 421 EGKLAHLDAPDEGKLQEMI-PLQAVTSREAQ-IADALDKREFGKALRDIMAAADEINQYF 478 Query: 429 DAQKPWELKKTN----PDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D KPWEL K + P+ A VL +E + L + L +P ++ + F L Sbjct: 479 DTAKPWELAKDSAQHTPNSALHEVLSACIEGFKYLTLFLSPILPDVSGRAFHFL 532 >gi|20905283|gb|AAM30563.1| Methionyl-tRNA synthetase [Methanosarcina mazei Go1] Length = 749 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 126/500 (25%), Positives = 225/500 (45%), Gaps = 39/500 (7%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N + HIGH + AD+ AR + +G +V F G+D HG I A+ G+T Sbjct: 49 VTCGLPYANGKAHIGHLRTYVPADIYARSLKKEGREVTFVCGSDTHGTPIVVNAEELGIT 108 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 V+ ++F + L I +D F T + +H+ + ++ +KG +Y Y Sbjct: 109 PTELVEIYHKHFDETFKQLGIYFDAFGTTDDPENHNRTHDIVSRLIEKGYVYPKIIEIAY 168 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQH---------------NPVQWMEEE 163 + D E +G + +H P ++ ++E Sbjct: 169 CPACNRFLPDRYVEGACPHCGETARGDECDQGCGKHLEPGELQNPVCTICGGPAEYRQQE 228 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 +FF+LS + + L+ Y + N +VK GL D ++R +WG+K P Sbjct: 229 HFFFKLSEFSNYLMDYLSK--DLGGTTNAINYARGWVKQGLTDWCITR-NLEWGVKFPGH 285 Query: 224 PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFL 279 ++YVW+DA Y+ T + S KFW D +H IG DI H I+WPA L Sbjct: 286 EDLVVYVWVDAPIGYIAFTEEWAAQAGDSWEKFWKGDGEIVHFIGGDITYHHCIFWPAML 345 Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIACGK 337 A+ +P V + G + + K SK+ G V+ E + G D LRY+L + K Sbjct: 346 KGADYSVPTAVVASGMVKIEDRKFSKTRGYVVWVGEDYLDHGFHPDLLRYYLASYTSHTK 405 Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397 + + L++++NA+L +GN + R++ K+Y + E + I + Sbjct: 406 ELNFSWRVLQEKINAELVAVLGNFLYRTMLFAFKNYGEV-----PEGEVEPEIRKEIEKA 460 Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 L E++ M+ +A+ ++L S + YF + +PW+L K + D V+Y + + + Sbjct: 461 LVEVKAAMEEYEFKKAVDSAMALASFGNTYFQSHEPWKLIKEDRDACGQVVYNCLHLAKA 520 Query: 458 LAILLQAFVPKLANKIFDIL 477 L+++ + +P+ K + L Sbjct: 521 LSLIFEPVIPQTMEKAWKGL 540 >gi|254410100|ref|ZP_05023880.1| methionyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420] gi|196183136|gb|EDX78120.1| methionyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420] Length = 576 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 135/523 (25%), Positives = 234/523 (44%), Gaps = 45/523 (8%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N H+G+ M+ ADV +RF R +G VLF TDEHG AA AG+ Sbjct: 21 ITSALPYINGIKHLGNLVGSMLPADVYSRFLRQEGESVLFICATDEHGTPAELAALEAGL 80 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + ++ +S+D F RT+ HH+ + ++++ + G + + Sbjct: 81 DVTTYCQKQHERQAEIYRGFGLSFDYFGRTSSPDHHELTQHFYQRLDENGFMEEREIRQV 140 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQHN------PVQWMEEEG------------ 164 YS D + D + Y G D + N P +E Sbjct: 141 YSHEDNRFLPDRYIVGTCPYCGYDRARGDQCENCTSVLDPTDLIEPRSAVSGSTNLEVRT 200 Query: 165 ---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 F +L+ D++ S+ ++ E+ R+ + ++ GL+D ++R WG+ +P Sbjct: 201 TKHLFLKLTTLSDEVRSWVDNQQEWTTLT--RSIALKWLNEGLQDRCITRD-LSWGVPVP 257 Query: 222 DDPQY---IMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD------LHVIGKDILRF 270 P + + YVW DA Y++ T N + K W D + + KD L F Sbjct: 258 R-PGFEGKVFYVWFDAPIGYISATKGWANQQAEADNWKSWWYDSQDIRHVQFMAKDNLPF 316 Query: 271 HAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 H I WPA +L P + + ++ + G K S S I + +E V D RY Sbjct: 317 HTIMWPAMILGTREPWTMADDIKGFNWLTYYGGKFSTSSKRGIFSDQALEIVPADYWRYA 376 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L+ D + + + ++N DLA+ +GN V+R + + G+IP G E+++ Sbjct: 377 LIAMSPESADSAFTWELFQIKINKDLADNLGNFVNRILKFANSRFKGVIPEGGTPGEAEQ 436 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 + C ++ ++ +QN +A + +L + ++Y D + PW L K N + A+ V+ Sbjct: 437 RLQESCESLITKLSNCLQNLEFRKAAETLCALWTVGNQYIDERAPWALFKQNKEEAALVI 496 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491 ++ +IR AI F+P A KIFD L +++ R Q L Q Sbjct: 497 RTSINLIRLYAIASNPFIPFTAEKIFDALQLSETERT-QRLTQ 538 >gi|293189064|ref|ZP_06607793.1| methionine--tRNA ligase [Actinomyces odontolyticus F0309] gi|292822011|gb|EFF80941.1| methionine--tRNA ligase [Actinomyces odontolyticus F0309] Length = 576 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 149/497 (29%), Positives = 228/497 (45%), Gaps = 60/497 (12%) Query: 40 LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99 + G DVL +GTDEHG I AA AGV+ + DQN+R + L +SYD F RTT Sbjct: 1 MAGHDVLMVSGTDEHGTPILVAADGAGVSARELADQNNRLIVEDLVALGLSYDLFTRTTA 60 Query: 100 KRHHDTCRILWKKISDKGDIYKGCY------SGWYSLRDEAYYNDDEVYKGADG----QY 149 H+ + ++ + D G + + S +L D Y GA+G Q Sbjct: 61 GNHYRVVQDMFATVRDNGYMIEKVTRAAISPSTGRTLPDR-YIEGTCPICGAEGARGDQC 119 Query: 150 YNA--QHNPVQ--------------WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193 N Q +P + ++E YF L A D L ++ + + R Sbjct: 120 DNCGNQMDPTELINPHSRINGETPNFVESTHYFLDLPALADALSAWLDEREKSGT---WR 176 Query: 194 NEVISFVKSGLKDLSLSRKT--FDWGIKIP---DDPQYIMYVWIDALTNYLTTT----GY 244 VI F ++ L+D+ T DWGI +P D P +YVW DA+ YL+ + Sbjct: 177 PNVIKFSQNFLEDIRPRAMTRDIDWGIPVPGWEDQPTKRLYVWFDAVIGYLSASIEWARR 236 Query: 245 LDNPDGSKAKFW--PADL--HVIGKDILRFHAIYWPAFLLSAN--------------LPL 286 +P+ + K+W P L + +GKD + FH+ WPA LL N L L Sbjct: 237 TGDPEAWR-KWWNDPEALTYYFMGKDNIVFHSQIWPAELLGYNGQGAKGGAPGDLGVLNL 295 Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 P +V S F+ +G+K S S G VI + + DALRYF+ D + Sbjct: 296 PTEVVSSEFLTMEGKKFSSSHGIVIYVRDFLSRYQADALRYFISAAGPETSDSDFTWAEF 355 Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 +R N +L G GNLV+R+ SMI K + G IPTPG + D ++L + + ++ Sbjct: 356 VRRTNGELVAGWGNLVNRTASMIAKKF-GEIPTPGELEDIDRALLDAVEAGFETVGNLIR 414 Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAF 465 + AL++ + LV E ++Y +P++LK R +TVL+ + + L ++L F Sbjct: 415 HHRQKAALSEAMRLVGEANKYVTDTEPFKLKAPEQQQRLATVLWTLAQAVTDLNLMLSPF 474 Query: 466 VPKLANKIFDILFVADE 482 +P AN I ++ A E Sbjct: 475 LPHAANDIDRVMGGAGE 491 >gi|260913818|ref|ZP_05920293.1| methionyl-tRNA synthetase [Pasteurella dagmatis ATCC 43325] gi|260632131|gb|EEX50307.1| methionyl-tRNA synthetase [Pasteurella dagmatis ATCC 43325] Length = 682 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 139/536 (25%), Positives = 243/536 (45%), Gaps = 55/536 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ A+ Y N H+GH E I AD+ RF R+ G +V F D HG I A G Sbjct: 8 ILVTCALPYANGAIHLGHLLEHIQADIWVRFQRMRGHNVYFICADDAHGTPIMLNADKLG 67 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + + ++ + + +ISY+++ T + ++KK+ G I S Sbjct: 68 ITPEELIAKSKADHVADFEGFNISYNNYHSTHSPENEALTAEMYKKLRANGFIKSRTISQ 127 Query: 127 WYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM-------------- 160 + ++ + D KG A+ QY ++ ++P + + Sbjct: 128 LFD-PEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSSTYSPTELINPRSVVSGATPVLK 186 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + E +FF L A++ L + +S L E N++ + +SGL+ +SR +G KI Sbjct: 187 DSEHFFFDLPAFEGMLKEWIKSGS---LQPEIANKMQEWFESGLQQWDISRDAPYFGFKI 243 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAIY 274 PD YVW+DA Y+ + L + G FW D H IGKDI+ FH+++ Sbjct: 244 PDTEDKYFYVWLDAPIGYMASFKNLCDKSGLNFDDFWKKDSTAELYHFIGKDIVYFHSLF 303 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L +L P VF+HG++ G K+SKS G I + + + LRY+ ++ Sbjct: 304 WPAMLEGCDLRKPTNVFAHGYVTVNGVKMSKSRGTFIQASTYLRHLAPEYLRYYYAAKLN 363 Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 +D + + +R+NAD+ N NL SRS I K +DG + A D ++L+ Sbjct: 364 NRIEDLDLNLEDFVQRLNADVVNKFVNLASRSAGFITKRFDGKLSAEIA----DPALLAE 419 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451 +I + + + + +V+ L + ++Y D + PW + K A T+ + Sbjct: 420 FVEKSTQIANYYEEREFGKVVREVMLLADKANKYIDDKAPWVIAKEEGRDAELQTICSMA 479 Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL------------FVADENRCFQSLDQRLKP 495 +++ R LAI L+ +P++ + L + + F++L QRL+P Sbjct: 480 LQLFRVLAIYLKPVIPQIIERAEAFLQDELSWESLNAPLLNHQILPFKALAQRLEP 535 >gi|121611392|ref|YP_999199.1| methionyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] gi|187647777|sp|A1WRC4|SYM_VEREI RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|121556032|gb|ABM60181.1| methionyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] Length = 691 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 141/524 (26%), Positives = 229/524 (43%), Gaps = 50/524 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M KL+++TA+ Y N H+GH E I AD+ RF R+ G +V F D HG I Sbjct: 1 MPSTRKLFVTTALPYANGPFHLGHLMEYIQADIWVRFQRMQGHEVNFVGADDTHGAPIMI 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD-- 118 AA+ AG T + FV + + D +S+D++ T +H+ R +++ + D+ D Sbjct: 61 AAEKAGKTPQQFVADIAAGRKPYLDGFHLSFDNWHSTDAPENHELARQIYRDLRDRADGS 120 Query: 119 -IYKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWME----- 161 I + ++ + D + G + + + + P + ++ Sbjct: 121 LIERRSIEQFFDPGKSMFLPDRYIVGECPRCHAKEQYGDNCEQCGSVYAPAELIDPVSAL 180 Query: 162 ---------EEGYFFRLS-----AYQDKLLSYYESHPEFILPIER----RNEVISFVKSG 203 E +FF+LS + + + PE + R+ G Sbjct: 181 SGAKPELRSSEHFFFKLSDPRCVEFLQRWTQDGKLQPEVANKVREWFGLRSNPDGSCSEG 240 Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---- 259 L D +SR +GI+IPD P YVW+DA YL L G + AD Sbjct: 241 LDDWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLAALKNLLEKRGQNYDAYMADPALE 300 Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 H IGKDI+ FH ++WPA L + P VF HGF+ GEK+SKS G +DP++ + Sbjct: 301 QYHFIGKDIVTFHTLFWPAMLHLSGRKTPDNVFVHGFLTINGEKMSKSRGTGLDPLKYL- 359 Query: 319 EVGVDA--LRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 +G++A LRY+L +++ +D + RVN+DL N+ SR+ + K + G Sbjct: 360 SLGMNAEWLRYYLATKLSARNEDMDLGTEDFMVRVNSDLIGKYVNIASRAAGFLTKRFAG 419 Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 + + F + ++L+ I + Q + +A +++ L +V+ Y D KPWE Sbjct: 420 RLTSD--FGAAGLALLADLHGARDTIAQWYQAREFGKATREIMLLADKVNAYVDRNKPWE 477 Query: 436 LKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L K N V V + L L +P LA D + Sbjct: 478 LAKDAANGQALHQVCSVLINAFATLTRYLSPVLPALARAAQDFV 521 >gi|319896964|ref|YP_004135159.1| methionyl-tRNA synthetase [Haemophilus influenzae F3031] gi|317432468|emb|CBY80824.1| methionyl-tRNA synthetase [Haemophilus influenzae F3031] Length = 684 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 134/503 (26%), Positives = 238/503 (47%), Gaps = 45/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G + F D HG I A Sbjct: 7 KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + RD A +IS+D++ T + + ++ K+ G I Sbjct: 67 GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A++ L + S L E N++ + +SGL+ +SR +G Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272 +IP YVW+DA Y+ + L + +G +FW A+L H IGKDI+ FH+ Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCDREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF+HG++ G K+SKS G I + + + LRY+ + Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361 Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + +D ++ + +RVN D+ N + NL SR+ I K ++G + A DE++ Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDETLF 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + ++I +++ ++A+ ++++L + ++Y D + PW + K A V Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +PKLA + Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500 >gi|332141410|ref|YP_004427148.1| methionyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] gi|327551432|gb|AEA98150.1| methionyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] Length = 675 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 136/514 (26%), Positives = 225/514 (43%), Gaps = 57/514 (11%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E+ ++ +++A+ Y N H+GH E I D+ RF RL G + D HG + Sbjct: 1 MSEKRRILVTSALPYANGSIHLGHLLEHIQTDIWTRFQRLRGNECYSVCADDAHGTPVML 60 Query: 61 AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AQ G+T + V + + + +D+ D ++YD++ T + C ++ ++ + G I Sbjct: 61 KAQELGITPEEMVARTRAEHHQDLVD-FHVNYDNYYVTHSPENKAFCEEIYTRLDNAGYI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQ------YYNAQHNPVQ---------- 158 K + + E + D V GA+ Q A ++P + Sbjct: 120 SKRTINQLFDPEKEMFLPDRFVKGTCPSCGAEDQNGDSCDVCGATYSPTEVKNPRSVVSG 179 Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E E +FF L ++ L + S L E N++ + GL+ +SR Sbjct: 180 ATPVLRESEHFFFDLPKFEGMLKEWIRSG---ALQEEMANKLQEWFTEGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268 +G +IP P YVW+DA Y+ + + D + FW AD H IGKDI Sbjct: 237 YFGFEIPGAPNKFFYVWVDAPVGYMASFKNFCDQNNLEFDDFWKADSEAELYHFIGKDIT 296 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH ++WPA L A P V HGF+ G K+SKS G I ++ + + LRY+ Sbjct: 297 YFHCLFWPAMLEGAGYRKPTGVNIHGFVTVNGAKMSKSRGTFIKGRTYLDHLNPEYLRYY 356 Query: 329 LVREIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 ++ DG D D ++VN+DL + N+ SR S I K +DG + Sbjct: 357 FASKLG---DGVTDIDLNFTDFAQKVNSDLVGKVVNIASRCASFITKRFDGKL------- 406 Query: 385 ESDESILSVCSRVLQEIRENM----QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 SD I Q E++ + + H+A+ ++++L + +++ D PW K Sbjct: 407 -SDNVIEPELIAEFQNASESIAALFEKRKYHQAVREIMALADKANQFIDNNAPWVTIKDE 465 Query: 441 PDRAST--VLYVTVEVIRQLAILLQAFVPKLANK 472 + T V + + + R L I L+ +P LA K Sbjct: 466 TKQQFTHDVCSLGINMFRLLVIYLKPVLPVLAEK 499 >gi|229072522|ref|ZP_04205724.1| Methionyl-tRNA synthetase 2 [Bacillus cereus F65185] gi|228710498|gb|EEL62471.1| Methionyl-tRNA synthetase 2 [Bacillus cereus F65185] Length = 544 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 129/511 (25%), Positives = 237/511 (46%), Gaps = 41/511 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R+ G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRVKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K D+ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y + D E +G +A +P+ +E++ + ++ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182 Query: 177 LSYYESHPEFILPIERRNEVIS---------------FVKSGLKDLSLSRKTFDWGIKIP 221 +Y + F I+R E+ +VK GL D ++SR G+ IP Sbjct: 183 EHFYFALHTFQQQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241 Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFHAI 273 +D + +YVWI+A+T Y + + + G +FW ++ +V GKD + FH++ Sbjct: 242 VEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFHSV 299 Query: 274 YWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 300 IWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVN 359 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 +D + N++L GN V+R++ I K Y G++P E + + Sbjct: 360 APENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDKVEG 419 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + RV + I + AL + V ++YFD ++PW+ ++ +P +Y V Sbjct: 420 LYKRVGEAIEQTK----FKVALETIFDTVRFANKYFDEKQPWKQREDDPVSCEETIYNCV 475 Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +I A LL+ F+P + ++ + L + + N Sbjct: 476 YLIANFAHLLEPFLPFSSERVRNTLSIVNRN 506 >gi|218709003|ref|YP_002416624.1| methionyl-tRNA synthetase [Vibrio splendidus LGP32] gi|254782875|sp|B7VLW8|SYM_VIBSL RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|218322022|emb|CAV18060.1| methionyl-tRNA synthetase [Vibrio splendidus LGP32] Length = 686 Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 136/504 (26%), Positives = 222/504 (44%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 +L ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 7 QLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + + ++ ++ G I S Sbjct: 67 GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126 Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160 + E + D D+ D G+ Y+ NP + Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 186 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + E +FF L ++ L + S L E N++ + +SGL+ +SR +G +I Sbjct: 187 DSEHFFFDLPQFESMLKEWTRSGS---LQNETANKMQEWFESGLQQWDISRDAPYFGFEI 243 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273 P + YVW+DA Y+ + L + D + ++W D H IGKDI+ FH++ Sbjct: 244 PGEKDKFFYVWLDAPVGYMASFKNLCDKRDDLNFDEYWKKDSTTELYHFIGKDIVYFHSL 303 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L A P VF HG++ G K+SKS G I + + + LRY+ ++ Sbjct: 304 FWPAMLEGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYYAAKL 363 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + + +RVNAD+ N I NL SR+ I K ++G + A E ++ Sbjct: 364 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSAEFAEPELYNEFVA 423 Query: 393 VCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 R+ Q E RE RA+ ++ +L + ++Y D + PW L K V Sbjct: 424 AAERIGQLYETRE------FSRAIREITALADKANQYIDEKAPWVLAKEEGKEKELQEVS 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P+LA + Sbjct: 478 SVGINLFRVLMAYLKPVMPELAAR 501 >gi|46143801|ref|ZP_00133908.2| COG0143: Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207836|ref|YP_001053061.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20] gi|126096628|gb|ABN73456.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 675 Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 132/501 (26%), Positives = 233/501 (46%), Gaps = 43/501 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ A+ Y N H+GH E I AD+ RF R+ G ++ F D HG I A G Sbjct: 1 MLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQG 60 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + +++ + +IS+D++ T + + + ++KK+ G I S Sbjct: 61 ITPEQLIEKAKADHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVISQ 120 Query: 127 WYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM-------------- 160 + + + D V KG A+ QY + + ++P+ + Sbjct: 121 LFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAISGATPIVK 179 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E E +FF L ++ L + S L E N++ + +SGL+ +SR +G I Sbjct: 180 ESEHFFFDLPNFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFPI 236 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAIY 274 PD YVW+DA Y+ + L + G +FW D H IGKDI+ FH+++ Sbjct: 237 PDAENKFFYVWLDAPIGYMASFKNLCDRTGLNFDEFWKKDSETELYHFIGKDIVYFHSLF 296 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L L P VF+HG++ G K+SKS G I ++ + + LRY+ ++ Sbjct: 297 WPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKLN 356 Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 +D + +RVN+D+ N + NL SR+ S I K ++G + A DE++ + Sbjct: 357 ERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADKLEDEALFAE 412 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451 ++I + +N+ ++A+ ++ L + ++Y D + PW + K A V + Sbjct: 413 FIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSMG 472 Query: 452 VEVIRQLAILLQAFVPKLANK 472 +E+ R L L+ +P+LA + Sbjct: 473 IELFRVLMSYLKPVLPQLAER 493 >gi|229020277|ref|ZP_04177046.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1273] gi|229026501|ref|ZP_04182856.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1272] gi|228734809|gb|EEL85449.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1272] gi|228741030|gb|EEL91259.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1273] Length = 544 Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 139/541 (25%), Positives = 245/541 (45%), Gaps = 56/541 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G VL+ +G+D +G I A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEHVLYVSGSDCNGTPITIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K D+ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTVKEVADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGLCPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218 E ++F L +Q ++ + E + R+ I ++K GL+D ++SR G+ Sbjct: 183 EHFYFALHKFQQQIKAAVEIAKQ---KGTWRDNAIQLTERYLKEGLQDRAVSRD-LPIGV 238 Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPAD---LHVIGKDILRF 270 IP +D + +YVWI+A+T Y + + + + + + +FW D +V GKD + F Sbjct: 239 PIPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETEKADQEFWDRDAKTYYVHGKDNIPF 296 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 H+I WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 297 HSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFL 356 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +D + N++L GN V+R++ I K YDG++P E E Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPKGIINVELKEK 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 I + + + E ++ AL + V ++YFD ++PW+ ++ P +Y Sbjct: 417 I----EGLYKNVGELIEQAKFKVALETIFDAVRFANKYFDEKQPWKQREDAPVSCEETIY 472 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 V +I A LL+ F+P + K+ +IL + N KP L D + P Sbjct: 473 NCVYLIANFANLLEPFLPFSSEKVRNILSIVKRN---------WKPQNTLPNRIDSVQPL 523 Query: 510 F 510 F Sbjct: 524 F 524 >gi|293609112|ref|ZP_06691415.1| methionyl-tRNA synthetase [Acinetobacter sp. SH024] gi|292829685|gb|EFF88047.1| methionyl-tRNA synthetase [Acinetobacter sp. SH024] Length = 688 Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 145/543 (26%), Positives = 240/543 (44%), Gaps = 63/543 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I AD+ R R G DV + D HG I A+ Sbjct: 3 KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVAYVCADDAHGTAIMLRAEAN 62 Query: 66 GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + + + RD D + +D + T + ++ K D G+I Sbjct: 63 GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNRDAGNIAVRPV 121 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161 + + ++ + D KG ++ QY YNA NP + Sbjct: 122 TQLFD-PEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPV 180 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + YFF+L + + L + + E LP+ N++ + ++GL D +SR +G Sbjct: 181 EKSSDHYFFKLPNFSEYLQKW--TRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGF 238 Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLD--NPDGSKAKFWPAD-----LHVIGKDILRF 270 +IPD P YVW+DA Y+++ Y+ PD + FW D H IGKDI+ F Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPDLNFDDFWKKDSQNDVYHFIGKDIVYF 298 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 HA++WPA L AN P +F +GF+ G+K+SKS G I ++ + + LRY+ Sbjct: 299 HALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ +D + D ++VN+DL + N+ SR I ++ + A T+ +S Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSAQCAETDLVQS 418 Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446 + + E RE A+ ++++L ++Y D +KPW L K Sbjct: 419 FIDAGDSIAAAYEARE------FSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVL 472 Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQR 492 V V + + RQLA+ L +P LA ++ D L V+ E FQ L QR Sbjct: 473 DVCSVGINLFRQLAVYLAPVLPTLAQQVQDFLKLESFDFESRKQILVSHEIAQFQPLMQR 532 Query: 493 LKP 495 + P Sbjct: 533 VDP 535 >gi|296109584|ref|YP_003616533.1| methionyl-tRNA synthetase [Methanocaldococcus infernus ME] gi|295434398|gb|ADG13569.1| methionyl-tRNA synthetase [Methanocaldococcus infernus ME] Length = 639 Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 138/500 (27%), Positives = 245/500 (49%), Gaps = 44/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I+TA+AY N H+GH I AD+L ++ +L G +V+ GTD HG I A+ G Sbjct: 4 ITTALAYTNGPLHLGHVRSTYIPADILYKYLKLRGEEVIHVGGTDNHGVPILLRAEKEGK 63 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + V+ + ++ D L I +D F +T + H T + + K+ + G IY+ + Sbjct: 64 KPEEIVEYYHKRIKEDLDSLGIEFDVFGKTHSEIHIKTAQEFYLKLVENGYIYEKEIEQF 123 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQH-----NPVQWMEEEG------------- 164 Y + + D V Y G + + + + P + E Sbjct: 124 YCENCKKFLPDRYVEGLCPYCGGEARGDHCESCGRHLEPFELREPYCVICGSKNLKVKKS 183 Query: 165 --YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222 YFF+LSA +++L +Y ++ E +P +N ++++K L D +SR WG+ IP Sbjct: 184 IHYFFKLSALKEELENYIKNAKE--MPEHVKNLALNWIKE-LHDWDISR-DIPWGVPIPG 239 Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW----PADLHVIGKDILRFHAIYWPAF 278 + +MYVW++A Y++ T L + K+W H IGKDI HA++WP Sbjct: 240 TDK-VMYVWLEAPIGYISFTKMLG--EEYYKKYWLNKDSKIYHFIGKDITVHHAVFWPGM 296 Query: 279 LLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337 L++ ++ LP V S G++ +G+K+S S G VI + +E+ D LRY+LV K Sbjct: 297 LIAHSSYNLPSAVISGGYLTLEGKKMSTSKGWVIWIKDFVEKFDSDYLRYYLVMAAPLFK 356 Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397 D + + +K+VN +L N IGN R ++ Y P E E IL + Sbjct: 357 DCDFSLEEFQKKVNNELINIIGNFTHRVLTFT---YRKCKKVPLVEIEESE-ILKLIDET 412 Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 ++E + ++ AL +V+ L + + YF ++PW +K + ++ VLY++ ++++ Sbjct: 413 VEEYDKLIREFKFRDALNKVLHLAIKGNEYFQKEEPWNIK--DEEKLKEVLYLSCKLVKA 470 Query: 458 LAILLQAFVPKLANKIFDIL 477 ++ LL ++P + ++ +I+ Sbjct: 471 ISYLLYPYMPNKSRELLNIM 490 >gi|320325637|gb|EFW81699.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. B076] gi|320327080|gb|EFW83094.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] gi|330876900|gb|EGH11049.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] Length = 682 Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 138/546 (25%), Positives = 237/546 (43%), Gaps = 49/546 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +D + + D AD L + +D+F T + + +++ ++ D G I Sbjct: 61 RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160 + ++ + + D KG A+ QY A + P Sbjct: 120 ATRSVTQYFDPEKKMFLAD-RFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAIS 178 Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + + +FF L + L S+ S L N++ ++ SGL+ +SR Sbjct: 179 GTTPVLKDSKHFFFDLPTFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266 +G +IPD+P YVW+DA Y+ + L PD +W H IGKD Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A L P + HG++ G+K+SKS G I ++ + + LR Sbjct: 296 IVNFHALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPE 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDE 471 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500 V + + + RQL I L+ +P L A K ++ + E+ + +L P L Sbjct: 472 VQAVCSLGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKTLLGNHQLNPFSALM 531 Query: 501 KTFDPI 506 DP+ Sbjct: 532 TRIDPL 537 >gi|229049724|ref|ZP_04194281.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH676] gi|229112480|ref|ZP_04242017.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-15] gi|228670860|gb|EEL26167.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-15] gi|228722637|gb|EEL74025.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH676] Length = 544 Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 132/513 (25%), Positives = 238/513 (46%), Gaps = 45/513 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K DQ F+ L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKIVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G +FW ++ +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + + Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + RV + I + AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 EGLYKRVGEAIEQTK----FKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V +I A LL+ F+P + ++ + L + N Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506 >gi|228473672|ref|ZP_04058422.1| methionine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624] gi|228274886|gb|EEK13701.1| methionine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624] Length = 690 Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 134/510 (26%), Positives = 241/510 (47%), Gaps = 39/510 (7%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E+ I+ A+ Y N HIGH A + AD+ AR+ RL DV F G+DEHG I+ A+ Sbjct: 3 ERYTITAALPYTNGPIHIGHLAGVYVPADIFARYQRLKNNDVAFICGSDEHGVAISIKAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T + +D+ ++ +D IS+D++ RT+ H+ T ++ + DKGD + Sbjct: 63 KEGTTPQEIIDKYNKIIKDSLFDFGISFDNYSRTSLPIHYQTASEFFRTLYDKGDFIEET 122 Query: 124 YSGWYSLRDEAYYNDDEVY----KGADGQYYNAQH-------------NPVQWM------ 160 Y + + D V K + + Y Q NP + Sbjct: 123 SEQLYDEQAGQFLADRFVIGTCPKCGNEEAYGDQCERCGTSLNATDLINPKSTLTGSKPV 182 Query: 161 --EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + + +F L Y + L + E H P +V S++ GL+ +++R DWG Sbjct: 183 LRQTKHWFLPLQDYTEFLEKWIIEGHKNDWKP-NVYGQVKSWIDDGLRPRAVTRD-LDWG 240 Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270 I +P + ++YVW DA Y+++T +G + + D +H IGKD + F Sbjct: 241 IPVPVEGAEGKVLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDKKTKLIHFIGKDNIVF 300 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRY 327 H I +PA L + + LP+ V ++ F+ +G K+S S + E +EE D LRY Sbjct: 301 HCIIFPAMLKAEGSYILPENVPANEFLNLEGNKLSTSKNWAVWLNEYLEEFPSQQDTLRY 360 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 + KD + + R N +L GN ++R + + K Y G++P+ G T+ D Sbjct: 361 VITANAPETKDNDFTWKDFQARNNNELVAIYGNFINRVMVLTDKYYKGVVPSVGELTQVD 420 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 + + ++Q+I ++++ A +++++ ++Y ++PW+L K +P R T+ Sbjct: 421 REVFAQIKELIQKIEQSLERYRFREAQQELMNIARLGNKYLADEEPWKLIKEDPKRVETI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +Y+ + + LA+ + F+P + K+ +L Sbjct: 481 MYIALHIATALAVTSEPFLPFTSEKLKRML 510 >gi|298207410|ref|YP_003715589.1| methionyl-tRNA synthetase [Croceibacter atlanticus HTCC2559] gi|83850046|gb|EAP87914.1| methionyl-tRNA synthetase [Croceibacter atlanticus HTCC2559] Length = 690 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 137/521 (26%), Positives = 230/521 (44%), Gaps = 37/521 (7%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M ++ I+ A+ Y N HIGH A + AD+ AR+ R+ G DVLF G+DEHG I Sbjct: 1 MTTPKRYTITAALPYTNGPIHIGHLAGVYVPADIYARYQRMQGEDVLFVCGSDEHGVPIT 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ GVT + VD+ + + IS+D++ RT+ K HHDT ++ + Sbjct: 61 IKAKKEGVTPQDVVDKYHTIIKKSFEDFGISFDNYSRTSAKIHHDTASEFFENLYKNDKF 120 Query: 120 YKGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM-------- 160 + Y + D +E G + HN + Sbjct: 121 IEEVTEQLYDPGANQFLADRFVVGTCPKCGNEESYGDQCESCGTSHNATDLINPKSAISG 180 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + +F L Y+D L + + + S++ GL+ +++R Sbjct: 181 AKPILKETKHWFLPLDQYEDYLKDWILKDHKKDWKTNVYGQCKSWIDDGLRPRAVTRD-L 239 Query: 215 DWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDI 267 DWGI +P ++YVW DA Y++ T G +W + LH IGKD Sbjct: 240 DWGIPVPVKGADGKVLYVWFDAPIGYISATKEWAQAKGKDWEPYWKNEDTKLLHFIGKDN 299 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324 + FH I +P+ L + + +P V ++ F+ +G K+S S + E +E+ D Sbjct: 300 IVFHCIIFPSMLKAEGSYIMPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEDFPGQQDV 359 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N +L GN ++R V + K Y G +P P ++ Sbjct: 360 LRYALTANAPETKDNDFTWADFQARNNNELVAVFGNFINRVVVLTNKYYGGDVPEPSTYS 419 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 E DE L+ I +++ A ++ + ++Y ++PW+ KT+ +R Sbjct: 420 EIDEQTLTELKTYPDVIASSLERYRFREAQKLLMDVARLGNKYLADEEPWKTAKTDAERT 479 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 TV+YV +++ LA L + F+P +NK+ DIL + ++ Sbjct: 480 KTVMYVALQIAAALATLSEPFLPFTSNKLKDILNLTSQDSA 520 >gi|229082281|ref|ZP_04214744.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-2] gi|228700713|gb|EEL53236.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-2] Length = 544 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 129/511 (25%), Positives = 237/511 (46%), Gaps = 41/511 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K D+ F+ L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y + D E +G +A +P+ +E++ + ++ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182 Query: 177 LSYYESHPEFILPIERRNEVIS---------------FVKSGLKDLSLSRKTFDWGIKIP 221 +Y + F I+R E+ +VK GL D ++SR G+ IP Sbjct: 183 EHFYFALHTFQQQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241 Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFHAI 273 +D + +YVWI+A+T Y + + + G +FW ++ +V GKD + FH++ Sbjct: 242 VEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFHSV 299 Query: 274 YWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 300 IWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVN 359 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 +D + N++L GN V+R++ I K Y G++P E + + Sbjct: 360 APENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDKVEG 419 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + RV + I + AL + V ++YFD ++PW+ ++ +P +Y V Sbjct: 420 LYKRVGEAIEQTK----FKVALETIFDTVRFANKYFDEKQPWKQREDDPVSCEETIYNCV 475 Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +I A LL+ F+P + ++ + L + + N Sbjct: 476 YLIANFAHLLEPFLPFSSERVRNTLSIVNRN 506 >gi|196040453|ref|ZP_03107753.1| putative methionyl-tRNA synthetase [Bacillus cereus NVH0597-99] gi|196028585|gb|EDX67192.1| putative methionyl-tRNA synthetase [Bacillus cereus NVH0597-99] Length = 544 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 137/540 (25%), Positives = 247/540 (45%), Gaps = 54/540 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD---LHVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G +FW ++ +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + I Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 R+ + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V +I A LL+ F+P + +I +IL + + N +P L D + P F Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNILSIVNRN---------WEPQHTLPSRIDSVQPLF 524 >gi|152986766|ref|YP_001347028.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa PA7] gi|187647743|sp|A6V1U3|SYM_PSEA7 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|150961924|gb|ABR83949.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa PA7] Length = 679 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 132/521 (25%), Positives = 232/521 (44%), Gaps = 54/521 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF ++ G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T++ +D + + D AD L + +D++ T + + + ++ K+ + G I Sbjct: 61 RAEREGITSEQLIDAVRAEHMGDFADFL-VDFDNYHSTHSEENRELSSAIYLKLREAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWMEEEG--- 164 + ++ D+ + D KG + + A + P + + + Sbjct: 120 DTRPVTQYFD-PDKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAIS 178 Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 YFF+L ++ L + S L N++ ++ SGL+ +SR Sbjct: 179 GATPVLKESLHYFFKLPDFEAMLKQWTRSG---ALQESVANKLAEWLDSGLQQWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKD 266 +G +IPD P YVW+DA Y+ + L P+ FW D H IGKD Sbjct: 236 PYFGFEIPDAPGKYFYVWLDAPIGYMASFRNLCARRPELDFDAFWGKDSGAELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A P + HG++ G+K+SKS G + ++ + + LR Sbjct: 296 IVNFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLR 355 Query: 327 YFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPG 381 Y+ ++ G +D + + ++VN+DL + N+ SR I K G++ P P Sbjct: 356 YYYASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAP- 414 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439 +L+ I E + + +RA+ ++++L + + Q PW L K Sbjct: 415 -------ELLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEG 467 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 D+ V + + + RQL I L+ +PKLA L VA Sbjct: 468 QQDKVQAVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVA 508 >gi|50083984|ref|YP_045494.1| methionyl-tRNA synthetase [Acinetobacter sp. ADP1] gi|68565979|sp|Q6FE36|SYM_ACIAD RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|49529960|emb|CAG67672.1| methionyl-tRNA synthetase [Acinetobacter sp. ADP1] Length = 685 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 146/543 (26%), Positives = 243/543 (44%), Gaps = 63/543 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I AD+ R R G DV + D HG I A+ Sbjct: 3 KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62 Query: 66 GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ K + + RD D + +D + T + ++ K + G+I Sbjct: 63 GISPEKQIANVQQEHIRDF-DGFGVHFDHYDSTHSAENKVRSEDIYLKNREAGNIAVRPI 121 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161 + + + + +D KG A+ QY YNA NP + Sbjct: 122 TQLFDPEKQMFLSD-RFIKGTCPKCKAEDQYGDACEVCGTTYNATELLNPRSTLSGATPV 180 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + YFF+L + + L + + E LP+ N++ + ++GL D +SR +G Sbjct: 181 EKSSDHYFFKLPNFGEYLQKW--TRDEGRLPVSIANKLDEWFEAGLADWDISRDAPYFGF 238 Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLD--NPDGSKAKFWPAD-----LHVIGKDILRF 270 +IPD P YVW+DA Y+++ Y+ P+ + +W D H IGKDI+ F Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPELNFDDYWKKDSQNEVYHFIGKDIVYF 298 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 HA++WPA L AN P +F +GF+ G+K+SKS G I ++ + + LRY+ Sbjct: 299 HALFWPAMLEGANYRTPSGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ +D + D ++VN+DL + N+ SR I ++ + A E +S Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSANCAEPELVQS 418 Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRAS 445 + + Q E RE A+ ++++L + ++Y D +KPW L K + Sbjct: 419 FIDAGDSIAQAYEARE------FSAAIREIMALADKANQYIDEKKPWALAKQEGQEQQVH 472 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI--------FDI-----LFVADENRCFQSLDQR 492 V V + + RQLAI L +P LA ++ FD + +A E FQ L QR Sbjct: 473 NVCSVGINLFRQLAIYLSPVLPTLAAQVQAFLQLESFDFASRQQILLAHEIAQFQPLMQR 532 Query: 493 LKP 495 + P Sbjct: 533 VDP 535 >gi|33152186|ref|NP_873539.1| methionyl-tRNA synthetase [Haemophilus ducreyi 35000HP] gi|68565995|sp|Q7VMC9|SYM_HAEDU RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|33148408|gb|AAP95928.1| methionyl-tRNA synthetase [Haemophilus ducreyi 35000HP] Length = 684 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 131/507 (25%), Positives = 237/507 (46%), Gaps = 43/507 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + K+ ++ A+ Y N H+GH E I AD+ RF R+ G V F D HG I Sbjct: 1 MSNKRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGHQVYFVCADDAHGTPIML 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A G+T + + + + +IS+D++ T + + + ++K + DKG I Sbjct: 61 NAAKQGITPEQLIAKAKADHIADFQSFNISFDNYHSTHSEENRNITTAMYKTLRDKGLIK 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM-------- 160 S + + + D V KG A+ QY + + ++P+ + Sbjct: 121 TRVISQLFDPEKQMFLPDRFV-KGTCPKCQAEDQYGDNCEVCASTYSPMDLINPHSVVSG 179 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + E +FF L ++ L ++ +H + P + N++ + +SGL+ +SR Sbjct: 180 ATPIVKQSEHFFFDLPNFEAMLKTW--THSGSLQP-QIANKMQEWFESGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG-SKAKFWPAD-----LHVIGKDIL 268 +G IPD YVW+DA Y+ + L + G + +FW + H IGKDI+ Sbjct: 237 YFGFPIPDTENKFFYVWLDAPIGYMASFKNLCDRTGLNYEEFWQKESKTELYHFIGKDIV 296 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH+++WPA L + P +F+HG++ G K+SKS G I ++ + + LRY+ Sbjct: 297 YFHSLFWPAMLEGCDQRKPTNIFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYY 356 Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ +D + D +RVN+D+ N + NL SR+ S I K + G + A D Sbjct: 357 YAAKLNERIEDLDLNLDDFVQRVNSDIVNKLVNLASRNASFITKRFAGNL----ADKLED 412 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-- 445 E++ + I ++ + + ++A+ ++ L + ++Y D + PW + K A Sbjct: 413 EALFAEFVAQASNIADHYEAREYNKAIRLIMDLCDKANKYVDDKAPWVIAKQADREAELH 472 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472 V + +E+ R L L+ +P+LA + Sbjct: 473 AVCSMGIELFRILISYLKPVLPQLATR 499 >gi|317124049|ref|YP_004098161.1| methionyl-tRNA synthetase [Intrasporangium calvum DSM 43043] gi|315588137|gb|ADU47434.1| methionyl-tRNA synthetase [Intrasporangium calvum DSM 43043] Length = 607 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 144/527 (27%), Positives = 231/527 (43%), Gaps = 59/527 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K+ + A Y N HIGH + +DV +R+ R+ G DVL +GTDEHG I A+ Sbjct: 3 KVLSAVAWPYTNGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVLAEK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + D+ +R L +SYD F RTT H+ + L+ G + + Sbjct: 63 EGMTPQEVTDKYNRVIATDLTELGLSYDLFTRTTTANHYAVSQELFSGNWRNGYMIEQTT 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159 G S D + Y A G + N + ++ Sbjct: 123 KGAISPSTGRTLPDRYIEGTCPICGYGEARGDQCDNCGNQLDAEELINPRSKINGETPEF 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217 +E + +F L A L + + R VI F ++ L D+ T DWG Sbjct: 183 IETQHFFLDLPALATALAEWLDGREGSGT---WRPNVIKFARNLLDDVRPRAMTRDIDWG 239 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVI-----GK 265 I IP D+ +YVW DA+ YL+ + G ++ W D + GK Sbjct: 240 IPIPLEGWQDNTHKRLYVWFDAVVGYLSASIEWARRVGDPERWREWWNDPEAVSYYFQGK 299 Query: 266 DILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FHA WPA LL L LP +V + F+ +G++ S S G+VI Sbjct: 300 DNITFHAQIWPAELLGYAGLGEKGGSAGAYGTLNLPTEVVASEFMTMEGKQFSTSRGHVI 359 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 +V+E G D LRYF+ +D + +R N++L G GNLV+R+ SMI K Sbjct: 360 YVRDVLERYGPDPLRYFICAAGPENQDSDFTWAEFIQRNNSELVAGWGNLVNRTASMIAK 419 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 + G IP G DE++L+ + ++ Q + + +V+ +V E +RY Sbjct: 420 SF-GEIPAAGPLEPVDEALLTAVREAFDVVGGLIERQRFKQGIGEVMRVVGEANRYVAET 478 Query: 432 KPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +P++LK + +R TVL+V + + + L+ F+P +N++ ++ Sbjct: 479 EPFKLKGDDERERLGTVLHVLAQAVVSINTLMAPFLPHGSNRVHRVM 525 >gi|254448547|ref|ZP_05062007.1| methionyl-tRNA synthetase [gamma proteobacterium HTCC5015] gi|198261930|gb|EDY86215.1| methionyl-tRNA synthetase [gamma proteobacterium HTCC5015] Length = 680 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 130/512 (25%), Positives = 228/512 (44%), Gaps = 43/512 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +R ++ +++A+ Y N H+GH E I D+ +R+ +L G + + D HG I Sbjct: 1 MSDRRRILMTSALPYANGSIHLGHMVEYIQTDIWSRYQKLRGHECYYVCADDAHGTPIML 60 Query: 61 AAQNAGVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AQ+ GVT + +++ + R D AD +I +D + T + + ++ + + G I Sbjct: 61 KAQSEGVTPEQLIEKIGQEHRADFAD-FNIGFDHYHVTHSPENRELSSQIYLALREAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYND-----DEVYKGADGQY------YNAQHNPVQWM-------- 160 + Y + + D D G+D QY A + P + Sbjct: 120 HSRVIEQAYDPEAKMFLPDRFIKGDCPKCGSDDQYGDSCEKCGATYQPTELKNPHSVISG 179 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E E +FF+L ++ L + + + + NE + +SGL+D +SR Sbjct: 180 ATPITKESEHFFFQLKDFEAFLQQWMQDSDVQSGVVNKMNE---WFESGLQDWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDIL 268 +G +IPD P YVW+DA Y+ + L + G +FW AD H IGKDI Sbjct: 237 YFGFEIPDAPGKYFYVWLDAPVGYMASFRKLCSDQGIDFDQFWAADSDAELYHFIGKDIA 296 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH ++WPA L A P VF HGF+ G+K+SKS G I ++ + + LRY+ Sbjct: 297 YFHTLFWPAMLKGAGFRPPSGVFCHGFLTVDGQKMSKSRGTFIKARTYLDHLSPEYLRYY 356 Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ G +D + ++RVN+DL + N+ SR + K +G + + Sbjct: 357 FAAKLGAGLEDIDLSLEDFRQRVNSDLVGKVINIASRCAGFVKKLGEGQL----SAQLGR 412 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445 + + + I + + + A+ Q++ L + + +PW L K D Sbjct: 413 QDLFDQAASASANIADLYEARNYREAMRQIMHLADTANTFIAEAEPWVLAKQEGKQDDVV 472 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 T+ + + RQ+ + L+ +P+LA + L Sbjct: 473 TICSDGINLFRQIIVYLKPVLPELARGVEQFL 504 >gi|71027023|ref|XP_763155.1| methionyl-tRNA synthetase [Theileria parva strain Muguga] gi|68350108|gb|EAN30872.1| methionyl-tRNA synthetase, putative [Theileria parva] Length = 691 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 93/257 (36%), Positives = 151/257 (58%), Gaps = 7/257 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 ++ ++ ++++AIAY N PH+GHAYE +I DV++R++R+ G V+F+TGTDEHG K+ Sbjct: 93 LENKKPYHLASAIAYTNGLPHVGHAYEAVICDVISRYYRMFGRRVIFSTGTDEHGIKVLT 152 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ T D S F+ + L + YD FIRTT + H + +W+ + KGDIY Sbjct: 153 TAKQQNKTPIEVCDYYSNEFKKFYERLLVEYDRFIRTTSESHMKAAKTIWRTVFKKGDIY 212 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 G Y+G+YS+R+E + + E K D + P M E YFF + Y+ L+ Y Sbjct: 213 LGEYNGYYSMREERFIPNTEA-KLTDFK-DPVSGKPYDLMSESSYFFTMERYRTPLVEYI 270 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 ++ +FI P + RNE+++ +K L DLS+SR +FDWGI++P ++ +++ N Sbjct: 271 STNQDFIYPKKVRNEILTRLKDQLDDLSISRTSFDWGIEVPSTDDIVITEYVNNDVN--- 327 Query: 241 TTGY-LDNPDGSKAKFW 256 GY DN +++KF+ Sbjct: 328 -LGYNHDNKLFNESKFY 343 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 85/251 (33%), Positives = 144/251 (57%), Gaps = 9/251 (3%) Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 +++MYVW DAL+ Y+T++G ++ S+ +WP DL VIGKDI F ++ S L Sbjct: 404 KHVMYVWFDALSFYMTSSGLGESL--SEMTYWPTDLQVIGKDISWFQSVILATMCFSMGL 461 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 PL +K+ +HGFI G K+SKSLGNV++ E+++EVGV++ RY+L++ G D +D+ Sbjct: 462 PLTRKILAHGFIQGSDGRKMSKSLGNVLNLDELLQEVGVESFRYYLLKSTVMGSDVNFDQ 521 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 + LK+ N+DLA+ +GNLV R S++ K +G++P+ + +S + ++E + Sbjct: 522 NQLKEMHNSDLADNVGNLVHRLTSLVTKYNEGVLPSYKSKVKSPFDFV----EFMKECSD 577 Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463 + I+ L +++ Y PW K N D+ +VL V +E + LA L Sbjct: 578 YVLKLDIYNVLMLTNMKFKDLNNYLTVTTPWAEK--NQDKRDSVLRVLLESVYFLAHFLY 635 Query: 464 AFVPKLANKIF 474 +P+ ++F Sbjct: 636 PVLPQSMERLF 646 >gi|161485679|ref|NP_632891.2| methionyl-tRNA synthetase [Methanosarcina mazei Go1] gi|25009360|sp|Q8PYJ4|SYM_METMA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS Length = 715 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 126/502 (25%), Positives = 226/502 (45%), Gaps = 39/502 (7%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ + Y N + HIGH + AD+ AR + +G +V F G+D HG I A+ G Sbjct: 13 VLVTCGLPYANGKAHIGHLRTYVPADIYARSLKKEGREVTFVCGSDTHGTPIVVNAEELG 72 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T V+ ++F + L I +D F T + +H+ + ++ +KG +Y Sbjct: 73 ITPTELVEIYHKHFDETFKQLGIYFDAFGTTDDPENHNRTHDIVSRLIEKGYVYPKIIEI 132 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQH---------------NPVQWME 161 Y + D E +G + +H P ++ + Sbjct: 133 AYCPACNRFLPDRYVEGACPHCGETARGDECDQGCGKHLEPGELQNPVCTICGGPAEYRQ 192 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 +E +FF+LS + + L+ Y + N +VK GL D ++R +WG+K P Sbjct: 193 QEHFFFKLSEFSNYLMDYLSK--DLGGTTNAINYARGWVKQGLTDWCITR-NLEWGVKFP 249 Query: 222 DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPA 277 ++YVW+DA Y+ T + S KFW D +H IG DI H I+WPA Sbjct: 250 GHEDLVVYVWVDAPIGYIAFTEEWAAQAGDSWEKFWKGDGEIVHFIGGDITYHHCIFWPA 309 Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIAC 335 L A+ +P V + G + + K SK+ G V+ E + G D LRY+L + Sbjct: 310 MLKGADYSVPTAVVASGMVKIEDRKFSKTRGYVVWVGEDYLDHGFHPDLLRYYLASYTSH 369 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 K+ + L++++NA+L +GN + R++ K+Y + E + I Sbjct: 370 TKELNFSWRVLQEKINAELVAVLGNFLYRTMLFAFKNYGEV-----PEGEVEPEIRKEIE 424 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 + L E++ M+ +A+ ++L S + YF + +PW+L K + D V+Y + + Sbjct: 425 KALVEVKAAMEEYEFKKAVDSAMALASFGNTYFQSHEPWKLIKEDRDACGQVVYNCLHLA 484 Query: 456 RQLAILLQAFVPKLANKIFDIL 477 + L+++ + +P+ K + L Sbjct: 485 KALSLIFEPVIPQTMEKAWKGL 506 >gi|323493149|ref|ZP_08098280.1| methionyl-tRNA synthetase [Vibrio brasiliensis LMG 20546] gi|323312620|gb|EGA65753.1| methionyl-tRNA synthetase [Vibrio brasiliensis LMG 20546] Length = 686 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 131/504 (25%), Positives = 219/504 (43%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + + ++ ++ G I S Sbjct: 67 GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126 Query: 126 GWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWME------------- 161 + E + D E G + ++P + ++ Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDSCGETYSPTELIDPKSAVSGATPVMK 186 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E +FF L ++ L + S L E N++ + +SGL+ +SR +G +I Sbjct: 187 DSEHFFFDLPQFESMLQEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFGFEI 243 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHAI 273 P + YVW+DA Y+ + L N ++W D H IGKDI+ FH++ Sbjct: 244 PGEKDKFFYVWLDAPVGYMASFKNLCNKTEGLDFDEYWKKDSTTELYHFIGKDIVYFHSL 303 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L + P VF HG++ G K+SKS G I ++ + + LRY+ ++ Sbjct: 304 FWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAATYLDHLDPECLRYYYAAKL 363 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + + +RVNAD+ N I NL SR+ I K ++G + A E ++ Sbjct: 364 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSANFAEPELYNEFVA 423 Query: 393 VCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVL 448 R+ L E RE RA+ ++ +L + ++Y D + PW + K + Sbjct: 424 AAGRIAELYETRE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P+LA + Sbjct: 478 SVGINLFRVLMTYLKPVMPELAAR 501 >gi|158317640|ref|YP_001510148.1| methionyl-tRNA synthetase [Frankia sp. EAN1pec] gi|158113045|gb|ABW15242.1| methionyl-tRNA synthetase [Frankia sp. EAN1pec] Length = 565 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 142/514 (27%), Positives = 236/514 (45%), Gaps = 48/514 (9%) Query: 7 LYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N PH+GH A + AD+ AR+ R+ G VL +G+D HG I A Sbjct: 19 VLVAVAWPYANGAPHLGHIAGAYLPADIFARYQRMAGNRVLMVSGSDAHGTPITVRADEE 78 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV+ + VD+ F + L IS+D F T H + ++ ++ + G IY S Sbjct: 79 GVSPQEIVDRYHPEFLRIWSELGISFDLFTSTRTDNHSAVAQDVFTRLREAGYIYAKETS 138 Query: 126 GWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH---------------NPVQWME 161 +Y + D V Y+ A G Q N V M Sbjct: 139 QFYDPDAGRFLPDRYVVGTCPHCSYQQARGDQCENCGRTLDPELLIDPRSKVTGAVPEMR 198 Query: 162 EEGYFF-RLSAYQDKLLSYYESHPEFILPIERR---NEVISFVKSGLKDLSLSRKTFDWG 217 + +FF RLS+ D+LL + ++ + RR N + FVK GL D +++R DWG Sbjct: 199 QTTHFFLRLSSLADQLLDWLQTRQGW-----RRHVLNWSVQFVKDGLHDRAITRD-LDWG 252 Query: 218 IKIPDD---PQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIGKD 266 + +P D P +YVW +A+ YL+ + +P+ +A +W A + +GKD Sbjct: 253 VPLPTDELGPGKRLYVWFEAVIGYLSASKEWAAASGDPEAWRA-WWEDPEAAAYYFVGKD 311 Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 + FH + WPA L+ L LP V ++ ++ G K SKS G E ++ + DAL Sbjct: 312 NIPFHTVIWPAMLIGYGGLNLPTDVPANQYVTFGGAKASKSAGIGRGVREYLDLLQPDAL 371 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 R+ L + D + +RVN +L GNLV+R ++ I K +DG +P G Sbjct: 372 RFALASVLPEQNDTEISDADIIRRVNDELIANWGNLVNRVLAQINKFFDGELPETGELDG 431 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 ++L L + E + AL + + +EV+ Y ++PW+ K + A+ Sbjct: 432 VHAALLDSVDAGLVRVGELLGKVEQRAALRAAMEISAEVNAYLYREEPWKTVKVDRAAAA 491 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 L V+++ I + L F+P ++++ ++L + Sbjct: 492 RSLAVSIQAISGITTALAPFLPFSSDRVAEVLGI 525 >gi|163802868|ref|ZP_02196757.1| methionyl-tRNA synthetase [Vibrio sp. AND4] gi|159173408|gb|EDP58231.1| methionyl-tRNA synthetase [Vibrio sp. AND4] Length = 686 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 137/505 (27%), Positives = 223/505 (44%), Gaps = 48/505 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + + ++ ++ G I S Sbjct: 67 GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWME------------ 161 + E + D V KG ++ QY + N P + +E Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDNCGETYSPTELIEPKSAVSGATPVM 185 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E +FF L ++ L + S L E N++ + +SGL+ +SR +G + Sbjct: 186 KDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN-PDGSK-AKFWPAD-----LHVIGKDILRFHA 272 IP + YVW+DA Y+ + L N DG ++W D H IGKDI+ FH+ Sbjct: 243 IPGEKNKFFYVWLDAPVGYMASFKNLCNKTDGLDFDEYWKKDSSAELYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF HG++ G K+SKS G + + + + LRY+ + Sbjct: 303 LFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + D + + +RVNAD+ N I NL SR+ I K ++G + A E + Sbjct: 363 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFISKRFEGKLAENFAEPELYNEFV 422 Query: 392 SVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTV 447 + R+ L E RE RA+ ++ +L + ++Y D + PW + K + Sbjct: 423 TAAGRIAELYETRE------FSRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEI 476 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P LA + Sbjct: 477 CSVGINLFRVLMTYLKPVMPALAAR 501 >gi|154489135|ref|ZP_02029984.1| hypothetical protein BIFADO_02449 [Bifidobacterium adolescentis L2-32] gi|154083272|gb|EDN82317.1| hypothetical protein BIFADO_02449 [Bifidobacterium adolescentis L2-32] Length = 620 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 147/530 (27%), Positives = 246/530 (46%), Gaps = 70/530 (13%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A Sbjct: 4 ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ + ++ +R +D+ D L +SYD F RTT H + L+ + + G IYK Sbjct: 64 GVSAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEKVVQELFTQCLENGYIYKDTQ 122 Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158 S +L D Y GADG + NPV + Sbjct: 123 KVAISPSTGRTLPDR-YIEGTCPICGADGARGDQCDACGNELDPDELINPVSKINGETPR 181 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216 + E E +F L A + L++ ++ + R VI+F K++ T DW Sbjct: 182 FEETEHFFLDLPALAEANLAWLKTREGW------RTNVINFSIGLFKEVKPRAITRDIDW 235 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVI 263 GI +P D+P +YVW DA+ YL+ + +P+ +A +W + + Sbjct: 236 GIPVPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRKGDPEAWRA-WWNDPTTPGYYFM 294 Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WP+ +L+ N L +P++V + F+ +G+K S S G Sbjct: 295 GKDNITFHSQIWPSEMLAYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGI 354 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI +++ VDA+RY++ D + + N +LA GNLV+R ++I Sbjct: 355 VIYVKDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLI 414 Query: 370 LKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 K++ G IP + T+ D ++L+ + + ++N AL++ + +V ++++Y Sbjct: 415 NKNF-GEIPAFDEASATDEDRALLAETKAAFETVGGLIENHRQKNALSEAMRVVGDINKY 473 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A +PW++K NP R TVL+ + + LL F+P A K+++ L Sbjct: 474 ISATEPWKIKD-NPARLGTVLHTAAQAVSDANHLLAPFLPHSAQKVWEAL 522 >gi|188994145|ref|YP_001928397.1| methionyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277] gi|226710912|sp|B2RHF5|SYM_PORG3 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|188593825|dbj|BAG32800.1| methionyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277] Length = 680 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 145/510 (28%), Positives = 239/510 (46%), Gaps = 37/510 (7%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 ++ ++ I+TA+ Y N HIGH A + AD+ AR+ RL G D L G+DEHG IA Sbjct: 3 RQFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLRGRDCLLIGGSDEHGVPIAL 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G T + VD+ + + L IS+D + RTT H T +K + +KG+ Sbjct: 63 KAKAEGCTPQEVVDRYHELIKRSFEGLGISFDIYSRTTSDIHRRTASEFFKTLYEKGEFV 122 Query: 121 KGCYSGWYSLRDEAYYND------------DEVYKG---ADGQYYNAQH--NPVQWMEEE 163 + +Y + + D D Y A G NA +P + Sbjct: 123 EQTSEQYYDEEAKQFLADRYIIGTCPHCSNDRAYGDQCEACGTSLNATDLIDPRSTISGS 182 Query: 164 GYFFRLSAYQDKLLSYYESH-PEFILPIERR------NEVISFVKSGLKDLSLSRKTFDW 216 R + + L +E E+IL + + S++ GL+ ++SR DW Sbjct: 183 APVLRETKHWYLPLDKHEPFLKEWILDGHKEWKSNVYGQCKSWLDMGLQPRAVSRD-LDW 241 Query: 217 GIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRF 270 GI +P + ++YVW DA Y++ T L PD S +W ++ +H IGKD + F Sbjct: 242 GIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-CPD-SWETWWKSEDTRLVHFIGKDNIVF 299 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327 H I +PA L + + LP V ++ F+ +G+KIS S + E +EE D LRY Sbjct: 300 HCIVFPAMLRAEGSFILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLEEFPGKQDVLRY 359 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L KD + + R N +L GN V+R++ + K +DG +P G T+ D Sbjct: 360 VLTANAPETKDNDFTWRDFQARNNNELVAIFGNFVNRALVLTHKYFDGAVPPKGELTDYD 419 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 + + V Q + + AL + ++L ++Y +PW+L KT+ +R +T+ Sbjct: 420 SRTIEEFAAVKQALEHQLDTFHFREALKEAMNLARIGNKYLADTEPWKLAKTDMNRVATI 479 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L +++++ LAI + F+P + K+ +L Sbjct: 480 LNLSLQITANLAIAFEPFLPFSSAKLMSML 509 >gi|225011284|ref|ZP_03701741.1| methionyl-tRNA synthetase [Flavobacteria bacterium MS024-3C] gi|225004594|gb|EEG42559.1| methionyl-tRNA synthetase [Flavobacteria bacterium MS024-3C] Length = 689 Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 145/533 (27%), Positives = 246/533 (46%), Gaps = 51/533 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 E + I+ A+ Y N HIGH A + AD+ +R+ R G DV F G+DEHG I+ Sbjct: 6 EASRYTITAALPYTNGPIHIGHLAGVYVPADIYSRYLRGIGKDVAFVCGSDEHGVAISMK 65 Query: 62 AQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117 A+ G+T K +D+ S++F D I++D + RT+ + HH T +KK+ Sbjct: 66 AKKEGITPKEVIDKYHAMISKSFIDFG----ITFDHYSRTSGEMHHKTASDFFKKLHQDQ 121 Query: 118 DIYKGCYSGWYSLRDEAYYND------------DEVYKG---ADGQYYNAQH--NPVQWM 160 + + E + D +E Y + G NA NP + Sbjct: 122 AFIEEITPQLFDPEAEQFLADRFVTGTCPKCGNEEAYGDQCESCGSSLNATELINPKSTL 181 Query: 161 --------EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSR 211 E + +F L Y+ L + E H + P + S+++ GLK +++R Sbjct: 182 SGAIPILKETKHWFLPLDKYESFLRKWILEGHKKDWKP-NVYGQCKSWIEEGLKPRAVTR 240 Query: 212 KTFDWGIKIP--DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFWPAD----LHV 262 DWGI +P ++YVW DA Y++ T +N D +W + +H Sbjct: 241 D-LDWGIPVPVPGGEGKVLYVWFDAPIGYISATKEWAAKNNKDWEP--YWKDENTKLVHF 297 Query: 263 IGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV- 320 IGKD + FH I +PA L + + LP+ V ++ F+ +G+K+S S + E +E Sbjct: 298 IGKDNIVFHCIIFPAMLKAHGDYILPENVPANEFLNLEGQKLSTSKNWAVWLHEYLEAFP 357 Query: 321 -GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 D LRY L KD + + R N +L +GN ++R V + K Y G +P+ Sbjct: 358 DQQDVLRYTLTANAPESKDNDFTWKDFQARNNNELVAILGNFINRGVVLTQKYYQGKVPS 417 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 PG D L+ I +++ A ++ + ++Y +PW+L KT Sbjct: 418 PGHLEAIDLETLAALKEFPATIANSLEKYRFREASGILMQVARLGNKYLADNEPWKLIKT 477 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492 +P R T++YV++++ LA+L + F+P ANK+ ++L +A N ++ + ++ Sbjct: 478 DPKRVETIMYVSLQIAAALAVLSEPFLPFTANKLNEMLHLAPLNLSWKDVAEK 530 >gi|313204253|ref|YP_004042910.1| methionyL-tRNA synthetase [Paludibacter propionicigenes WB4] gi|312443569|gb|ADQ79925.1| methionyl-tRNA synthetase [Paludibacter propionicigenes WB4] Length = 679 Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 143/513 (27%), Positives = 240/513 (46%), Gaps = 41/513 (7%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M ++ +++A+ Y N HIGH A + AD+ R+ RL G +VLF G+DEHG I Sbjct: 1 MTNFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKGEEVLFVGGSDEHGVPIT 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ GVT + VD+ + + IS+D + RTT K H + ++K I+DK Sbjct: 61 IKAKKEGVTPQDIVDRYHGIIKKSFEDFGISFDIYSRTTSKTHKELASEIFKTINDKDGF 120 Query: 120 YKGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM-------- 160 +Y + + D +E G + NP + Sbjct: 121 VIQTSEQYYDETAQQFLADRYITGKCPHCGNENAYGDQCEACGTSLNPTDLINPKSAISG 180 Query: 161 ------EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 E + ++ L ++ L + E H E+ + + S++ GL+ ++SR Sbjct: 181 SAPVMRETKHWYLPLDQHEAWLRQWILEDHKEWKPNV--YGQCKSWLDMGLQPRAVSRD- 237 Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDI 267 DWGI +P + ++YVW DA Y++ T L PD S K+W LH IGKD Sbjct: 238 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLLHFIGKDN 295 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324 + FH I +PA L + + LP V ++ F+ +G+KIS S + E +EE D Sbjct: 296 IVFHCIVFPAMLKAEGSYILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLEEFPGKQDV 355 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N +L GN ++R++ + K YDG +P G T Sbjct: 356 LRYVLTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRALVLTQKYYDGKVPALGQLT 415 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 + D+ L V ++ + + N A + ++L ++Y +PW++ KT+ DR Sbjct: 416 DYDKQTLDEFVNVKADVEKLLNNFRFRDAQKEAMNLARIGNKYLADTEPWKVAKTDMDRV 475 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ST++++++++ LAI + F+P + K+ +L Sbjct: 476 STIMHLSLQIAANLAIAFEPFLPFTSEKLRTML 508 >gi|53802679|ref|YP_112557.1| methionyl-tRNA synthetase [Methylococcus capsulatus str. Bath] gi|68565970|sp|Q60CR0|SYM_METCA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|53756440|gb|AAU90731.1| methionyl-tRNA synthetase [Methylococcus capsulatus str. Bath] Length = 694 Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 135/518 (26%), Positives = 236/518 (45%), Gaps = 54/518 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M K+ +++A+ Y N H+GH E I D+ RF ++ G D + D HG I Sbjct: 1 MTSPRKILVTSALPYANGPIHLGHLVEYIQTDIWVRFQKMRGHDCRYVCADDTHGTPIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G++ + + + + + RD I +D++ T + ++ ++ D+G I Sbjct: 61 RAEKEGISPEELIARVHGEHLRDFTG-FHIEFDNYYSTHSEETRAHAADIYGRLKDRGLI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWM------- 160 ++ E + D KG A QY ++ ++P + Sbjct: 120 ESRAIEQYFDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYSPTDLINPYSVVS 178 Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 E YFF+L + L + S L E N++ + ++GL D +SR Sbjct: 179 GAAPVRRESVHYFFKLGECAEFLKDWTRSG---ALQTEAANKLNEWFEAGLSDWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDI 267 +G +IPD P YVW+DA Y+ + L + G A++W D H IGKDI Sbjct: 236 PYFGFEIPDAPGKYFYVWLDAPIGYMGSFQNLCDRLGLDFAEYWKKDSEAELYHFIGKDI 295 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FHA++WPA L + P ++F+HGF+ GEK+SKS G I +E+ + + LR Sbjct: 296 LYFHALFWPAMLEHSGFRTPTRIFAHGFLTVNGEKMSKSRGTFITAQSYLEQGLNPEWLR 355 Query: 327 YFLVREIACGKDGFYDKDGLK-----KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 Y+ AC +G + L RVN+DL N+ SR+ + K +DG + P Sbjct: 356 YYY----ACKLNGTMEDIDLSLEDFVARVNSDLVGKYINIASRTAGFVTKFFDGRLDVPM 411 Query: 382 AFTESD--ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 + + + ++ +EI ++ ++A+ +++ L EV+ + + +KPWE+ K Sbjct: 412 QLADGEALDFLIDRLRDSAEEISGYYDSRDYNKAIRKIMELADEVNIFVNEKKPWEIAKR 471 Query: 440 NPDRA----STVLYVTVEVIRQLAILLQAFVPKLANKI 473 + + V +T+ + R L I L+ +P+LA + Sbjct: 472 DDSYSRGYLRVVCAITLNLFRLLTIYLKPILPRLAEAV 509 >gi|319776160|ref|YP_004138648.1| methionyl-tRNA synthetase [Haemophilus influenzae F3047] gi|329123331|ref|ZP_08251896.1| methionyl-tRNA synthetase [Haemophilus aegyptius ATCC 11116] gi|317450751|emb|CBY86971.1| methionyl-tRNA synthetase [Haemophilus influenzae F3047] gi|327471331|gb|EGF16783.1| methionyl-tRNA synthetase [Haemophilus aegyptius ATCC 11116] Length = 682 Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 134/501 (26%), Positives = 237/501 (47%), Gaps = 45/501 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G + F D HG I A Sbjct: 7 KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + RD A +IS+D++ T + + ++ K+ G I Sbjct: 67 GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A++ L + S L E N++ + +SGL+ +SR +G Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272 +IP YVW+DA Y+ + L + +G +FW A+L H IGKDI+ FH+ Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCDREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF+HG++ G K+SKS G I + + + LRY+ + Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361 Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + +D ++ + +RVN D+ N + NL SR+ I K ++G + A DE++ Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDETLF 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + ++I +++ ++A+ ++++L + ++Y D + PW + K A V Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477 Query: 450 VTVEVIRQLAILLQAFVPKLA 470 + +E+ R L L+ +PKLA Sbjct: 478 MGIELFRVLMSYLKPVLPKLA 498 >gi|325121110|gb|ADY80633.1| methionyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2] Length = 688 Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 145/543 (26%), Positives = 240/543 (44%), Gaps = 63/543 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I AD+ R R G DV + D HG I A+ Sbjct: 3 KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62 Query: 66 GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + + + RD D + +D + T + ++ K + G+I Sbjct: 63 GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161 + + ++ + D KG ++ QY YNA NP + Sbjct: 122 TQLFD-PEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPV 180 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + YFF+L + + L + + E LP+ N++ + ++GL D +SR +G Sbjct: 181 EKSSDHYFFKLPNFSEYLQKW--TRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGF 238 Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLD--NPDGSKAKFWPAD-----LHVIGKDILRF 270 +IPD P YVW+DA Y+++ Y+ PD + FW D H IGKDI+ F Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPDLNFDDFWKKDSQNDVYHFIGKDIVYF 298 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 HA++WPA L AN P +F +GF+ G+K+SKS G I ++ + + LRY+ Sbjct: 299 HALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ +D + D ++VN+DL + N+ SR I ++ + A TE +S Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSADCAETELVQS 418 Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446 + + E RE A+ ++++L ++Y D +KPW L K Sbjct: 419 FIDAGDSIAAAYEARE------FSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVL 472 Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQR 492 V V + + RQLA+ L +P LA ++ D L V+ E FQ L QR Sbjct: 473 DVCSVGINLFRQLAVYLAPVLPTLAKQVQDFLKLESFDFESRKQILVSHEIAQFQPLMQR 532 Query: 493 LKP 495 + P Sbjct: 533 VDP 535 >gi|196033059|ref|ZP_03100472.1| putative methionyl-tRNA synthetase [Bacillus cereus W] gi|218906235|ref|YP_002454069.1| putative methionyl-tRNA synthetase [Bacillus cereus AH820] gi|226695272|sp|B7JEJ3|SYM_BACC0 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|195994488|gb|EDX58443.1| putative methionyl-tRNA synthetase [Bacillus cereus W] gi|218535969|gb|ACK88367.1| putative methionyl-tRNA synthetase [Bacillus cereus AH820] Length = 544 Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 136/540 (25%), Positives = 247/540 (45%), Gaps = 54/540 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ + E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKTAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD---LHVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G + FW + +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDREFWDGEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL+ Sbjct: 298 SVIWPAVLLGIGEGTIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLI 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + I Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 R+ + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V +I A LL+ F+P + +I + L + + N +P L D + P F Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524 >gi|260582922|ref|ZP_05850706.1| methionyl-tRNA synthetase [Haemophilus influenzae NT127] gi|260094022|gb|EEW77926.1| methionyl-tRNA synthetase [Haemophilus influenzae NT127] Length = 682 Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 133/503 (26%), Positives = 236/503 (46%), Gaps = 45/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G + F D HG I A Sbjct: 7 KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + RD A +IS+D++ T + + ++ K+ G I Sbjct: 67 GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A++ L + S L E N++ + +SGL+ +SR +G Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272 +IP YVW+DA Y+ + L N +G +FW A+L H IGKDI+ FH+ Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF+HG++ G K+SKS G I + + + LRY+ + Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361 Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + +D ++ + +RVN D+ N + NL SR+ I K ++G + DE++ Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLSD----KLEDEALF 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + ++I +++ ++ + ++++L + ++Y D + PW + K A V Sbjct: 418 AEFTAQAEQIAAYYESREYNKTIREIMALTDKANKYIDEKSPWVIAKEEGKEAELQAVCS 477 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +PKLA + Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500 >gi|157375788|ref|YP_001474388.1| methionyl-tRNA synthetase [Shewanella sediminis HAW-EB3] gi|189083266|sp|A8FWN7|SYM_SHESH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|157318162|gb|ABV37260.1| Methionine--tRNA ligase [Shewanella sediminis HAW-EB3] Length = 692 Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 138/507 (27%), Positives = 238/507 (46%), Gaps = 47/507 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ +RF +L G + + D HG I AQ Sbjct: 5 QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLKAQ 64 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + + Q N + +D AD +I +D+F T + + ++ K+ D G I Sbjct: 65 QLGIEPEEMIAQVNKEHQQDFAD-FNIKFDNFHSTHSVENRELSGEIYLKLRDAGFIKTR 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWME--------- 161 S + +++ + D KG ++ QY + A +NP ++ Sbjct: 124 TISQLFD-PEKSMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYNPTDLIDPKSAVSGAT 182 Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 E +FF L A+++ L + S + E N++ + + GL+ +SR + Sbjct: 183 PVMKDSEHFFFDLPAFENMLSEWTRSG---AIQDEIANKLAEWFEQGLQQWDISRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILR 269 G +IPD P YVW+DA Y+ + L + D + FW D H IGKDI+ Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDRREDLNFDDFWSKDSTAEVYHFIGKDIVN 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH+++WPA L A P VF+HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 FHSLFWPAMLEGAGYRKPTSVFAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYY 359 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +RVN+DL + NL SR+ I K +DG + A T +E Sbjct: 360 AAKLSNRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLAKI-ADTTLEE 418 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446 + L+ V+ ++ EN + +A+ ++++L + Y PW+L K D A Sbjct: 419 TFLAK-QEVIADLYENRE---FGKAMREIMALADIANAYVADAAPWQLIKDEAKQDEAHQ 474 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKI 473 V + + R L L+ +PKLA+ + Sbjct: 475 VCSNALNLFRILVTYLKPVLPKLADDV 501 >gi|310768068|gb|ADP13018.1| methionyl-tRNA synthetase [Erwinia sp. Ejp617] Length = 676 Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 127/504 (25%), Positives = 225/504 (44%), Gaps = 44/504 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I AD+ R+ R+ G V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + S+ + +ISYD++ T + + + +++ ++ + G I Sbjct: 66 MGMAPEQMIADMSQEHQTDFAGFNISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160 S Y ++ + D KG + + +A ++P + + Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPNCQSPDQYGDNCEVCSATYSPTELIKPKSVVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 LRDSEHFFFDLPEFSAMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271 +IP P YVW+DA Y+ + L + G FW D H IGKDI+ FH Sbjct: 242 EIPGAPGKYFYVWLDAPIGYMGSFKNLCDKRGDIDFDAFWRQDSDAELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P +F HG++ G K+SKS G I ++ + D+LRY+ Sbjct: 302 SLFWPAMLEGSQFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + +RVNAD+ N + NL SR+ I K + G + A D ++ Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQLSAELA----DPAL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 I + ++ RA+ ++++L +RY D Q PW + K A + Sbjct: 418 YQTFIDASNSIAQAWASREFSRAVREIMALADAANRYVDEQAPWVVAKQEGRDADLQAIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +P LA + Sbjct: 478 SMGINLFRVLMTWLKPVMPSLAER 501 >gi|213961726|ref|ZP_03389992.1| methionyl-tRNA synthetase [Capnocytophaga sputigena Capno] gi|213955515|gb|EEB66831.1| methionyl-tRNA synthetase [Capnocytophaga sputigena Capno] Length = 688 Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 139/510 (27%), Positives = 230/510 (45%), Gaps = 47/510 (9%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I+ A+ Y N HIGH A + AD+ AR+ RL DV F G+DEHG I+ A+ G Sbjct: 7 ITAALPYTNGPIHIGHLAGVYVPADIFARYQRLKNNDVAFICGSDEHGVAISIKAKKEGT 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + +D+ + IS+D++ RT+ HH T +KK+ ++GD + Sbjct: 67 TPQAIIDKYHAIIKQSFADFGISFDNYSRTSAPIHHQTASDFFKKLYEQGDFIEEISEQL 126 Query: 128 YSLRDEAYYNDDEVY----KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y + D V K + + Y Q E G + D S S Sbjct: 127 YDEEAHQFLADRFVIGTCPKCGNPEAYGDQ------CERCGSSLNATDLIDPKSSITGSK 180 Query: 184 P------EFILPIERRNE-----------------VISFVKSGLKDLSLSR---KTFDWG 217 P + LP+ R E V VKS L D R + DWG Sbjct: 181 PTLKATKHWFLPLNRYQEFLEKWILEGHKSDWKPNVYGQVKSWLDDELKPRAVTRDLDWG 240 Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270 I +P + ++YVW DA Y+++T +G + + D +H IGKD + F Sbjct: 241 IPVPVEGAEGKVLYVWFDAPIGYISSTKEWAEREGKDWRPYWQDKNTELVHFIGKDNIVF 300 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327 H I +PA L + + LP V ++ F+ +G K+S S + E +++ D LRY Sbjct: 301 HCIIFPAMLKAEGSYILPTNVPANEFLNLEGNKLSTSKNWAVWLHEYLQDFPNQQDVLRY 360 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L KD + + R N +L GN ++R + K Y+G+IP G F + D Sbjct: 361 ALTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVAVLTQKYYEGVIPAAGEFNDID 420 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 L + + ++I ++++ A +++++ ++Y ++PW+L KT+P+R TV Sbjct: 421 TETLRQITELTEKIEQSLERYRFREAQQELMNMARLGNKYLADEEPWKLIKTDPERVKTV 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +YV +++ LA+ + F+P + K+ +L Sbjct: 481 MYVALQIATALAVASEPFLPFTSEKLKRML 510 >gi|224025452|ref|ZP_03643818.1| hypothetical protein BACCOPRO_02192 [Bacteroides coprophilus DSM 18228] gi|224018688|gb|EEF76686.1| hypothetical protein BACCOPRO_02192 [Bacteroides coprophilus DSM 18228] Length = 680 Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 143/512 (27%), Positives = 244/512 (47%), Gaps = 41/512 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DV+F G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ RD IS+D + RT+ K HHDT ++K+ DKG+ Sbjct: 63 RAKKEGITPQDVVDRYHTLIRDSFKEFGISFDVYGRTSSKIHHDTASDFFRKLYDKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG-----ADGQY------YNAQHNPVQWM--------- 160 + +Y + D + A+G Y + +P + + Sbjct: 123 EKTSEQYYDEEAHTFLADRYITGECPRCHAEGAYGDQCEKCGSTLSPTELINPKSAISGS 182 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + ++ L ++ L + E H E+ + + S++ GL+ ++SR Sbjct: 183 KPVMKETKHWYLPLDKHEGWLRQWILEEHKEWRPNV--YGQCKSWLDMGLQPRAVSR-DL 239 Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDIL 268 DWGI +P + ++YVW DA Y++ T L PD S K+W +H IGKD + Sbjct: 240 DWGIPVPVEGADGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLIHFIGKDNI 297 Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDAL 325 FH I +PA L + + LP V S+ F+ +G+KIS S + E +++ D L Sbjct: 298 VFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVL 357 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 RY L KD + + R N +L GN V+R++ + K +DG +P G T+ Sbjct: 358 RYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPACGELTD 417 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 D+ L + V E+ + + A + ++L ++Y +PW+L KT+ R + Sbjct: 418 YDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMGRVA 477 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 T+L + ++++ LAI + F+P + K+ +L Sbjct: 478 TILNIALQLVANLAIAFEPFLPFSSEKLRKML 509 >gi|91217588|ref|ZP_01254546.1| methionyl-tRNA synthetase [Psychroflexus torquis ATCC 700755] gi|91184268|gb|EAS70653.1| methionyl-tRNA synthetase [Psychroflexus torquis ATCC 700755] Length = 686 Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 137/513 (26%), Positives = 242/513 (47%), Gaps = 37/513 (7%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 MK ++ ++ A+ Y N HIGH A + AD+ R+ +L G DV F G+DEHG I Sbjct: 1 MKNPKRYTVTAALPYTNGPIHIGHLAGVYVPADIYVRYLKLKGEDVAFLCGSDEHGVPIT 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G++ + VD+ + + I +D++ RT+ K HHDT +K + DKG Sbjct: 61 IKAKKEGISPQDVVDKYNAIIKQSFQDFGIQFDNYSRTSAKIHHDTATEFFKTMYDKGKF 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVY----KGADGQYYNAQH-------------NPVQWMEE 162 + Y + + D V K + + Y Q NP + Sbjct: 121 IEETTEQLYDAKANQFLADRFVTGTCPKCGNEEAYGDQCEKCGSSLNATDLINPKSAITG 180 Query: 163 EGYFFRLSAYQDKLLSYYESH-PEFILPIERRN-------EVISFVKSGLKDLSLSRKTF 214 + + + + L Y+ ++IL +++ + S++ GL+ +++R Sbjct: 181 DVPTLKSTKHWFLPLDQYDGFLKDWILKDHKKDWKANVYGQCKSWLDEGLRARAVTRD-L 239 Query: 215 DWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267 DWGI +P ++YVW DA Y+++T +G + + D +H IGKD Sbjct: 240 DWGIPVPVKGGEGKVLYVWFDAPIGYISSTKEWAEREGKDWEPYWKDKDTKLVHFIGKDN 299 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324 + FH I +PA L + + LP V ++ F+ +G K+S S + + +E+ D Sbjct: 300 IVFHCIIFPAMLKAEGSYILPDNVPANEFLNLEGRKLSTSKNWAVWLHDYLEDFPGKEDV 359 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N++L GN ++R V + K Y+G++P F+ Sbjct: 360 LRYVLTANAPETKDNDFTWKDFQTRNNSELVAIYGNFINRVVVLTHKYYEGVVPKAFDFS 419 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 E+D + +I +++ A +++L ++Y ++PW+L+KTNP+R Sbjct: 420 ETDLKVFEDIKTFPSQISASIEKYRFREAQGIMMNLARLGNKYLADEEPWKLQKTNPERT 479 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ST++YV ++V LA+L + F+P A K+ +L Sbjct: 480 STIMYVALQVSSALAVLSEPFLPFTALKLKTML 512 >gi|330811331|ref|YP_004355793.1| Methionine--tRNA ligase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379439|gb|AEA70789.1| Methionine--tRNA ligase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 681 Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 129/516 (25%), Positives = 230/516 (44%), Gaps = 44/516 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D A+ L + +D+F T + + + ++ K+ D G I Sbjct: 61 RAEKEGITPEQLIANVQAEHSADFAEFL-VDFDNFHSTHAEENRELSSQIYLKLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQ---------- 158 + ++ + + D + G + QY A + P Sbjct: 120 ATRSITQYFDPEKKMFLADRFIKGTCPKCGTEDQYGDNCEKCGATYAPTDLKDPKSAISG 179 Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + + +FF+L +Q L ++ S L N++ ++ +GL+ +SR Sbjct: 180 ATPVLKDSQHFFFKLPDFQQMLQAWTRSG---TLQDAVANKIAEWLDAGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDI 267 +G +IPD+P YVW+DA Y+ + L N P+ FW D H IGKDI Sbjct: 237 YFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCNRTPELDFDAFWGKDSTAELYHFIGKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L A P + HG++ G+K+SKS G I ++ + + LRY Sbjct: 297 VNFHALFWPAMLEGAGFRKPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLSPEYLRY 356 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 357 YYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVAGNAAPEL 416 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRA 444 ++ L+ I + +++ RA+ ++++L + + + PW L K D Sbjct: 417 TDAFLAAAP----SIADAYESRDFARAMREIMALADRANAWIADKAPWSLAKQEGKQDEV 472 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 + + + + RQL I L+ +P LA L VA Sbjct: 473 QAICALGINLFRQLVIFLKPVLPLLAADAEAFLNVA 508 >gi|313497463|gb|ADR58829.1| Methionyl-tRNA synthetase [Pseudomonas putida BIRD-1] Length = 679 Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 133/521 (25%), Positives = 235/521 (45%), Gaps = 54/521 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E ++ +++A+ Y N H+GH E I D+ RF +L G ++ D HG I Sbjct: 1 MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D AD L + +D+F T + + + +++ ++ + G I Sbjct: 61 RAEKEGITPEQLIANVQAEHSSDFADFL-VDFDNFHSTHSEENRELSSLIYSRLREAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQW-------- 159 + ++ ++ + D KG A+ QY A + P + Sbjct: 120 ATRSVTQYFD-PEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAIS 178 Query: 160 ------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + + +FF+L +Q L + S L N++ ++ SGL++ +SR Sbjct: 179 GATPVLRDSQHFFFKLPDFQAMLQQWTRSG---TLQDAVANKLAEWLDSGLQEWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPD---------GSKAKFWPADLHV 262 +G +IP +P YVW+DA Y+ + L P+ GSKA+ + H Sbjct: 236 PYFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWNEGSKAELY----HF 291 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 IGKDI+ FHA++WPA L A P V HG++ G K+SKS G I ++ + Sbjct: 292 IGKDIVNFHALFWPAMLEGAGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQP 351 Query: 323 DALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + LRY+ ++ G D + + ++VN+DL + N+ SR I K +G++ + Sbjct: 352 EYLRYYYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNEGVMVSGD 411 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439 A E E+ L+ I E + + RA+ ++++L + + + PW L K Sbjct: 412 AAPELTEAFLAAAP----SIAEAYEARDFGRAMREIMALADRANAWIADKAPWSLAKQEG 467 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 D + + + RQL I L+ +P LA L VA Sbjct: 468 KQDEVQAICAQGINLFRQLVIFLKPVLPVLAADAEAFLNVA 508 >gi|146304661|ref|YP_001191977.1| methionyl-tRNA synthetase [Metallosphaera sedula DSM 5348] gi|189083262|sp|A4YI01|SYM_METS5 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|145702911|gb|ABP96053.1| methionyl-tRNA synthetase [Metallosphaera sedula DSM 5348] Length = 568 Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 148/547 (27%), Positives = 253/547 (46%), Gaps = 50/547 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAA 62 K+ +++A Y + PH+G+ I+ ADV AR+ RL +V+F +G+DEHG I A Sbjct: 2 KILVASAWPYVQSVPHLGNLIGSILSADVFARYARLKYGKENVVFVSGSDEHGTPIEIEA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 GV+ K DQ R + + +IS+D++ RT + H + +S + + Sbjct: 62 IKRGVSPKSLTDQAHEYDRQLFLNTWNISFDNYTRTESEVHKSFVKEFLLGVSKYIKVEE 121 Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYN-----------------AQHNP 156 Y RD+ + D V ++ A G + P Sbjct: 122 EELP--YCERDKLFLPDRFVKGTCPYCGFEDARGDQCDRCGRLLTPSLLINPKCAICGTP 179 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + + +FF L + + + + S + +P + +S+V GLK SL+R W Sbjct: 180 PVLRKTKHWFFDLRPFSEPIREWITSSQD--MPENVKGTALSWVNEGLKPRSLTRDN-SW 236 Query: 217 GIK--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWP----ADLHVIGKDI 267 GI P +YVW +AL YL+ T G + FW + IGKD Sbjct: 237 GIPAPFPGAEGKTIYVWFEALLGYLSATLEYFQGRGETERWKEFWENGKVRSYYFIGKDN 296 Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVD 323 + FHA+ PA LL++ N LP + + +++++G+K SKS +G ID +I EV D Sbjct: 297 IPFHAVILPAMLLASEKNYALPTVIAATEYLMYEGQKFSKSRKIGIWIDEAPLIMEV--D 354 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 R+ L+R KD + + VN++L + +GNLV+R ++M+ + + G IP P Sbjct: 355 YWRFLLIRMRPEEKDMNFTWTEAIRIVNSELNDDVGNLVNRVITMVNRYFQGKIPEPKNL 414 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 E D +LS L ++ + + V++L E + Y + + PW+ K++ + Sbjct: 415 KEVDMRLLSRVGETLDQVSFMFEKGKLKGGTELVLTLARETNAYLNEKAPWDKVKSDVED 474 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503 AS L+V IR +A++L +P+ A I+D L + + + + LKPG ++ K Sbjct: 475 ASNTLFVASSAIRAIALMLYPVIPEKAKLIYDQLGLDITQERWDNAKEPLKPGHVVGKP- 533 Query: 504 DPIFPRF 510 P+F + Sbjct: 534 APVFKKL 540 >gi|77460728|ref|YP_350235.1| methionyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1] gi|123603456|sp|Q3K7L0|SYM_PSEPF RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|77384731|gb|ABA76244.1| methionyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1] Length = 683 Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 130/516 (25%), Positives = 228/516 (44%), Gaps = 44/516 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D A+ L + +D+F T + + + ++ K+ D G I Sbjct: 61 RAEKEGITPEQLIANVQAEHSADFAEFL-VDFDNFHSTHAEENRELSSQIYLKLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQ---------- 158 + + ++ + + D + G + QY A + P Sbjct: 120 AQRSITQYFDPEKKMFLADRFIKGTCPKCGTEDQYGDNCEKCGATYAPTDLKDPKSAISG 179 Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + + +FF+L +Q+ L ++ S L N++ ++ +GL+ +SR Sbjct: 180 ATPVLKDSQHFFFKLPDFQEMLQAWTRSG---TLQDAVANKIAEWLDAGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDI 267 +G +IP +P YVW+DA Y+ + L N P+ FW D H IGKDI Sbjct: 237 YFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCNRTPELDFDAFWGKDSTAELYHFIGKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L A P + HG++ G+K+SKS G I ++ + + LRY Sbjct: 297 VNFHALFWPAMLEGAGFRKPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLSPEYLRY 356 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 357 YYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIQKGNAGLLVDTNAAPEL 416 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRA 444 E+ L+ I + + + RA+ + ++L + + + PW L K D Sbjct: 417 TEAFLAAAP----SIADAYEARDFARAMRETMALADRANAWIADKAPWSLNKQEGKQDEV 472 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V + + RQL I L+ +P LA L VA Sbjct: 473 QAVCATAINLFRQLVIFLKPVLPVLAADAEAFLNVA 508 >gi|260551003|ref|ZP_05825208.1| methionyl-tRNA synthetase [Acinetobacter sp. RUH2624] gi|260405951|gb|EEW99438.1| methionyl-tRNA synthetase [Acinetobacter sp. RUH2624] Length = 688 Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 147/546 (26%), Positives = 239/546 (43%), Gaps = 69/546 (12%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I AD+ R R G DV + D HG I A+ Sbjct: 3 KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62 Query: 66 GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY---- 120 G++ + + + RD D + +D + T + ++ K + G+I Sbjct: 63 GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121 Query: 121 -------KGCY-------SGWYSLRDEAYYNDD-EVYKGADGQYYNAQH--NPVQWME-- 161 KG + + E Y D EV G YNA NP + Sbjct: 122 TQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVC----GTTYNATELLNPRSTLSGA 177 Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 + YFF+L + + L + + E LP+ N++ + ++GL D +SR Sbjct: 178 TPVEKSSDHYFFKLPNFSEYLQKW--TRDEGRLPLSIANKLDEWFEAGLADWDISRDAPY 235 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDI 267 +G +IPD P YVW+DA Y+++ Y+ PD + FW D H IGKDI Sbjct: 236 FGFEIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDI 295 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L AN P +F +GF+ G+K+SKS G I ++ + + LRY Sbjct: 296 VYFHALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRY 355 Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + +++ +D + D ++VN+DL + N+ SR I ++ + A +E Sbjct: 356 YFASKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSAECAESEL 415 Query: 387 DESILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 +S + + + E RE A+ ++++L ++Y D +KPW L K Sbjct: 416 VQSFIDAGDSIAKAYEARE------FSTAIREIMALADRANQYIDEKKPWALAKQEGQEQ 469 Query: 445 ST--VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSL 489 V V + + RQLA+ L +P LA ++ D L V+ E FQ L Sbjct: 470 QVLDVCSVGINLFRQLAVYLAPVLPTLAKQVQDFLKLESFDFESRKQILVSHEIAQFQPL 529 Query: 490 DQRLKP 495 QR+ P Sbjct: 530 MQRVDP 535 >gi|325275202|ref|ZP_08141169.1| methionyl-tRNA synthetase [Pseudomonas sp. TJI-51] gi|324099689|gb|EGB97568.1| methionyl-tRNA synthetase [Pseudomonas sp. TJI-51] Length = 679 Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 133/517 (25%), Positives = 233/517 (45%), Gaps = 46/517 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E ++ +++A+ Y N H+GH E I D+ RF +L G ++ D HG I Sbjct: 1 MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D AD L + +D+F T + + + +++ ++ + G I Sbjct: 61 RAEKEGITPEQLIANVQAEHSSDFADFL-VDFDNFHSTHSEENRELSSLIYTRLREAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQW-------- 159 + ++ ++ + D KG A+ QY A + P + Sbjct: 120 TTRSVTQYFD-PEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAIS 178 Query: 160 ------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + + +FF+L +Q L + S L N++ ++ SGL++ +SR Sbjct: 179 GATPVLRDSQHFFFKLPDFQAMLQQWTRSG---TLQDAVANKLAEWLDSGLQEWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFW----PADL-HVIGKD 266 +G +IP +P YVW+DA Y+ + L P+ FW A+L H IGKD Sbjct: 236 PYFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWREGSTAELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A P V HG++ G K+SKS G I ++ + + LR Sbjct: 296 IVNFHALFWPAMLEGAGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQPEYLR 355 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ G D + + ++VN+DL + N+ SR I K G++ + A E Sbjct: 356 YYYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNQGVMVSGDAAPE 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443 E+ L+ I E + + RA+ ++++L + + + PW L K D Sbjct: 416 LTEAFLAAAP----SIAEAYEGRDFGRAMREIMALADRANAWIADKAPWSLAKQEGKQDE 471 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 + + + RQL I L+ +P LA L VA Sbjct: 472 VQAICAQGINLFRQLVIFLKPVLPLLAADAEAFLNVA 508 >gi|228930066|ref|ZP_04093076.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228829565|gb|EEM75192.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 544 Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 136/540 (25%), Positives = 247/540 (45%), Gaps = 54/540 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ + E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKTAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL---HVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G + FW + +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWVEETGKDDREFWDGEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL+ Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLI 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + I Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 R+ + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V +I A LL+ F+P + +I + L + + N +P L D + P F Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524 >gi|218463182|ref|ZP_03503273.1| methionyl-tRNA synthetase [Rhizobium etli Kim 5] Length = 203 Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 86/178 (48%), Positives = 121/178 (67%), Gaps = 3/178 (1%) Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 G+DG Y ++ + R+N+DLANGIGNL SRS+SMI+K+ DG IP G T+ D+++L+ Sbjct: 23 GQDGSYSEEAIGIRINSDLANGIGNLASRSLSMIVKNCDGKIPECGPLTDEDKAMLAQVD 82 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 + RE+M Q IHRALA +I++VS+ DRYF Q PW LKKT+P+R TVLYVT EV+ Sbjct: 83 ALHASTREDMGKQQIHRALASIIAVVSDTDRYFAGQAPWALKKTDPERMGTVLYVTAEVV 142 Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511 RQ+AILLQ F+P + K+ D++ + R F +L + RL G L P+FPR++ Sbjct: 143 RQIAILLQPFMPDSSGKLLDLVAAPADKRDFAALGEAGRLIAGTPLEAPT-PVFPRYV 199 >gi|154509672|ref|ZP_02045314.1| hypothetical protein ACTODO_02205 [Actinomyces odontolyticus ATCC 17982] gi|153799306|gb|EDN81726.1| hypothetical protein ACTODO_02205 [Actinomyces odontolyticus ATCC 17982] Length = 576 Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 148/497 (29%), Positives = 228/497 (45%), Gaps = 60/497 (12%) Query: 40 LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99 + G DVL +GTDEHG I AA AGV+ + DQN+R + L +SYD F RTT Sbjct: 1 MAGHDVLMVSGTDEHGTPILVAADGAGVSARELADQNNRLIVEDLVALGLSYDLFTRTTA 60 Query: 100 KRHHDTCRILWKKISDKGDIYKGCY------SGWYSLRDEAYYNDDEVYKGADG----QY 149 H+ + ++ + D G + + S +L D Y GA+G Q Sbjct: 61 GNHYRVVQDMFATVRDNGYMIEKVTRAAISPSTGRTLPDR-YIEGTCPICGAEGARGDQC 119 Query: 150 YNA--QHNPVQ--------------WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193 N Q +P + ++E YF L A + L ++ + + R Sbjct: 120 DNCGNQMDPTELINPHSRINGETPNFVESTHYFLDLPALAEALSAWLDEREKSGT---WR 176 Query: 194 NEVISFVKSGLKDLSLSRKT--FDWGIKIP---DDPQYIMYVWIDALTNYLTTT----GY 244 VI F ++ L+D+ T DWGI +P D P +YVW DA+ YL+ + Sbjct: 177 PNVIKFSQNFLEDIRPRAMTRDIDWGIPVPGWEDQPTKRLYVWFDAVIGYLSASIEWARR 236 Query: 245 LDNPDGSKAKFW--PADL--HVIGKDILRFHAIYWPAFLLSAN--------------LPL 286 +P+ + K+W P L + +GKD + FH+ WPA LL N L L Sbjct: 237 TGDPEAWR-KWWNDPEALTYYFMGKDNIVFHSQIWPAELLGYNGQGAKGGAPGDLGVLNL 295 Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 P +V S F+ +G+K S S G VI + + DALRYF+ D + Sbjct: 296 PTEVVSSEFLTMEGKKFSSSHGIVIYVRDFLSRYQADALRYFISAAGPETSDSDFTWAEF 355 Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 +R N +L G GNLV+R+ SMI K + G IPTPG + D ++L + + ++ Sbjct: 356 VRRTNGELVAGWGNLVNRTASMIAKKF-GEIPTPGELEDIDRTLLDAVETGFETVGNLIR 414 Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAF 465 + AL++ + LV E ++Y +P++LK R +TVL+ + + L ++L F Sbjct: 415 HHRQKAALSEAMRLVGEANKYVTDTEPFKLKAPEQQQRLATVLWTLAQAVTDLNLMLSPF 474 Query: 466 VPKLANKIFDILFVADE 482 +P AN I ++ A E Sbjct: 475 LPHAANDIDRVMGGAGE 491 >gi|212635626|ref|YP_002312151.1| methionyl-tRNA synthetase [Shewanella piezotolerans WP3] gi|212557110|gb|ACJ29564.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta subunit [Shewanella piezotolerans WP3] Length = 697 Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 136/508 (26%), Positives = 234/508 (46%), Gaps = 49/508 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ +RF +L G + + D HG I AQ Sbjct: 24 QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLKAQ 83 Query: 64 NAGVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + + Q + +D AD +I +D+F T + + + ++ K+ D G I Sbjct: 84 QMGIAPEEMIAQVQKEHEKDFAD-FNIQFDNFHSTHSEENRELASEIYVKLRDSGYIKTK 142 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY-------------------YNAQHNPV 157 S + +++ + D KG ++ QY Y+A Sbjct: 143 TISQLFD-PEKSMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYSTTDLLNPYSAVSGAT 201 Query: 158 QWMEE-EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 M++ E +FF L A++ L + S L E N++ + + GL+ +SR + Sbjct: 202 PVMKDTEHFFFDLPAFEGMLKEWINSGS---LQQEMANKLSEWFEQGLQQWDISRDAPYF 258 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILR 269 G +IPD P YVW+DA Y+ + L + D + FW D H IGKDI+ Sbjct: 259 GFEIPDAPGKFFYVWLDAPIGYMGSFKNLCDKRDDLNFDDFWSKDSTAEVYHFIGKDIVY 318 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH+++WPA L A L P V++HG++ G K+SKS G I ++ + + LRY+ Sbjct: 319 FHSLFWPAMLEGAGLRKPTSVYAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYY 378 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +RVN+DL + NL SR+ I K +DG + + + Sbjct: 379 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKL------AKIAD 432 Query: 389 SILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445 S L+ C QE N+ + + +A+ ++++L + Y PW+L K + A Sbjct: 433 SSLTDCFVAKQETIANLYETREYGKAMREIMALADVANAYVADAAPWQLIKDEAKQEEAH 492 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473 V + + R L L+ +PKLA + Sbjct: 493 QVCSNALNLFRILVTYLKPVLPKLAADV 520 >gi|258626535|ref|ZP_05721374.1| methionyl-tRNA synthetase [Vibrio mimicus VM603] gi|258581182|gb|EEW06092.1| methionyl-tRNA synthetase [Vibrio mimicus VM603] Length = 729 Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 140/506 (27%), Positives = 224/506 (44%), Gaps = 50/506 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 53 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 112 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ S RD A DIS+D++ T + + ++ ++ G I Sbjct: 113 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 171 Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160 S Y E + D V KG A G+ Y+ NP + Sbjct: 172 SQLYDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 230 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + + GL+ +SR +G Sbjct: 231 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 287 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + G ++W D H IGKDI+ FH Sbjct: 288 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFDEYWNKDSKTELYHFIGKDIVYFH 347 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G + + + + LRY+ Sbjct: 348 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 407 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVNAD+ N I NL SR+ I K +DG + A E Sbjct: 408 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAQFAEPELYAEF 467 Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446 R+ + E RE RA+ ++ +L + ++Y D + PW + K+ D+A Sbjct: 468 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 521 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472 + V + + R L L+ +P LA + Sbjct: 522 ICTVGINLFRVLVTYLKPVMPALAER 547 >gi|229124576|ref|ZP_04253761.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 95/8201] gi|228658916|gb|EEL14571.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 95/8201] Length = 544 Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 136/540 (25%), Positives = 247/540 (45%), Gaps = 54/540 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ + E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKTAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL---HVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G + FW + +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTAYYSASKHWAEETGKDDREFWDGEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL+ Sbjct: 298 SVIWPAVLLGIGEGTIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLI 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + I Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 R+ + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V +I A LL+ F+P + +I + L + + N +P L D + P F Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524 >gi|319953400|ref|YP_004164667.1| methionyl-tRNA synthetase [Cellulophaga algicola DSM 14237] gi|319422060|gb|ADV49169.1| methionyl-tRNA synthetase [Cellulophaga algicola DSM 14237] Length = 689 Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 141/519 (27%), Positives = 243/519 (46%), Gaps = 39/519 (7%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + I+ A+ Y N HIGH A + AD+ +R+ RL G DV F +G+DEHG I+ Sbjct: 6 KNPSRYTITAALPYTNGPIHIGHLAGVYVPADIYSRYLRLIGKDVAFISGSDEHGVAISM 65 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T K +D+ + I++D++ RT+ + HH+T +K + D+GD Sbjct: 66 KAKKEGITPKEVIDKYHAIIKKSFADFGITFDNYSRTSAEIHHETASEFFKTMYDQGDFI 125 Query: 121 KGCYSGWYSLRDEAYYND------------DEVYKGAD---GQYYNAQH--NPVQWM--- 160 + Y + + D +E Y G NA NP + Sbjct: 126 EETTEQLYDPEAKQFLADRFVVGTCPKCGYEEAYGDQCENCGSTLNATDLINPKSTISGA 185 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + +F L ++ L + E H P + S++ GLK +++R Sbjct: 186 APTVKETKHWFLPLDRHEAFLKEWILEGHKNDWKP-NVYGQCKSWIDDGLKPRAVTRD-L 243 Query: 215 DWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDI 267 DWGI +P ++YVW DA Y+++T +G +W + +H IGKD Sbjct: 244 DWGIPVPVPGGEGKVLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDENTKLVHFIGKDN 303 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324 + FH I +P+ L + LP V ++ F+ +G K+S S + E +E+ D Sbjct: 304 IVFHCIIFPSILKAHGGYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEDFPNMQDV 363 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N +L GN ++R V + K Y G+IPTP AF+ Sbjct: 364 LRYTLTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVVVLSNKYYQGIIPTPAAFS 423 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 + D L+ + + I +++ A +++SL ++Y ++PW++ K + +R Sbjct: 424 DIDLETLAEVKKYPEIISSSIERYRFREAGQELMSLARLGNKYLADEEPWKVIKQDEERV 483 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 T+++V +++ LA+L + F+P + K+ +IL +N Sbjct: 484 KTIMFVALQIAEALAVLSEPFLPFTSTKLKNILHSDAQN 522 >gi|262195070|ref|YP_003266279.1| methionyl-tRNA synthetase [Haliangium ochraceum DSM 14365] gi|262078417|gb|ACY14386.1| methionyl-tRNA synthetase [Haliangium ochraceum DSM 14365] Length = 557 Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 134/517 (25%), Positives = 228/517 (44%), Gaps = 42/517 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K I+ + Y N H+G+ M+ ADV ARF R +G +VL+ TDEHG AA Sbjct: 2 KTLITAGLPYINGIKHLGNLVGSMLPADVYARFLRQEGDEVLYVCATDEHGVPAELAAHE 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + F + + D+ I++D F R++ +H+ R ++ +++D G I K Sbjct: 62 AGQPVEAFCEAQHQIQADIYRRFGIAFDYFGRSSAPSNHELTREIFSQLADNGFIEKRAT 121 Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWME------------ 161 YSL D+ Y D E +G + +P +E Sbjct: 122 QQVYSLDDQRYLPDRYVIGTCPRCGYEAARGDQCESCTTLLDPTDLIEPRSAVSGSTKLE 181 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E + LS + + + E ++ P R ++ GL+D ++R WG+ Sbjct: 182 VRSTEHLYLLLSKLEPTVKDWVEEQGQW--PPLTRQVAGKWLGEGLRDRCITRN-LAWGV 238 Query: 219 KIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADLHVI---GKDILR 269 +P + + + YVW DA Y+ T PD KA +W D+H + GKD L Sbjct: 239 DVPGEEELVFYVWFDAPIGYIAATRDWAESSGQPDAWKA-YWQDATDVHYVQFMGKDNLP 297 Query: 270 FHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 FH I +PA L+ S++ LP ++ ++ + G K S S + +E D RY Sbjct: 298 FHTIMFPAMLMGASSSWNLPDQIKGLHWLNYYGGKFSTSQKRGVFSDAALELFPADYWRY 357 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L+ +I D + + VN DLA+ +GN V+R + + +P G+ ++ Sbjct: 358 ALMAQIPETSDSTFTWEMFASAVNKDLASVLGNFVNRVLRFTRSKFGETLPEGGSPGPAE 417 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 ++ C ++ R +M+ RA+ + L + + Y D + PW KT+ DRA+ V Sbjct: 418 AALQEECEAQVKLFRASMRALEFRRAMQALRKLWTIGNTYIDTEAPWAAIKTDRDRAAVV 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + ++R + Q +P L+ + D L ++D R Sbjct: 478 IRTCFNLLRLYGVSAQPIMPTLSASVLDALQLSDAER 514 >gi|121997514|ref|YP_001002301.1| methionyl-tRNA synthetase [Halorhodospira halophila SL1] gi|187647725|sp|A1WUY7|SYM_HALHL RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|121588919|gb|ABM61499.1| methionyl-tRNA synthetase [Halorhodospira halophila SL1] Length = 679 Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 136/508 (26%), Positives = 229/508 (45%), Gaps = 55/508 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N H+GH E I D+ ARF RL G + + D HG I A+ Sbjct: 4 RILVTSALPYANGPIHLGHLVEYIQTDIWARFQRLRGNECYYVCADDAHGTPIMLKARER 63 Query: 66 GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV + +++ + + + D AD L I +D + T + ++++++ G I + Sbjct: 64 GVDPEQLIEEMAASHQADFADFL-IGFDRYHSTHSAENRHFAELIYQRLEAGGHIERHTI 122 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160 Y E + D KG A QY A + P + Sbjct: 123 EQLYD-PGEGMFLPDRYIKGTCPRCAAPDQYGDSCEACGATYTPAELQDPVSVISGERPE 181 Query: 161 --EEEGYFFRLSAYQDKLLSYYES---HPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 E E +FFRL ++ L + + PE I N++ + ++GL+D +SR Sbjct: 182 VRESEHFFFRLQDFEALLRQWASAEHLQPEII------NKLNEWFEAGLRDWDISRDAPY 235 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-------LHVIGKDI 267 +G +IP YVW+DA Y+ + L G FW A H IGKDI Sbjct: 236 FGFRIPGTEDKYFYVWLDAPIGYMASFRRLAEERGIDFDAFWDAGRAEETELYHFIGKDI 295 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 FH ++WPA L A P V+ HGF+ G+K+SKS G I ++ + + LRY Sbjct: 296 AYFHTLFWPAMLHGAGYRTPTAVYCHGFLTVNGQKMSKSRGTFITARSYLDHLDPEYLRY 355 Query: 328 FLVREIA-CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + +++ +D D +RVN+D+ + N+ SR I K +DG + A S Sbjct: 356 YTAAKLSDSVEDIDLSFDDFVQRVNSDVVGKLVNIASRCAGFITKRFDGRL----APRLS 411 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 + + + I E + + RA+ +++ L + ++Y DA+KPWE K +P++A Sbjct: 412 APELFRTFTASAERIAELYEQREYARAVREIMHLADQANQYIDAEKPWERIK-DPEQARA 470 Query: 447 VLYVT---VEVIRQLAILLQAFVPKLAN 471 V + + + R L I ++ +P+LA Sbjct: 471 VQEICTMGLNLFRVLIIYIKPIMPRLAE 498 >gi|254236431|ref|ZP_04929754.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa C3719] gi|126168362|gb|EAZ53873.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa C3719] Length = 677 Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 130/520 (25%), Positives = 230/520 (44%), Gaps = 52/520 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF ++ G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAVYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T++ +D + + D AD L + +D++ T + + + ++ K+ D G I Sbjct: 61 RAEREGITSEQLIDAVRAEHMGDFADFL-VDFDNYHSTHSEENRELSSAIYLKLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164 + ++ + + D + G + + A + P + + + Sbjct: 120 DTRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISG 179 Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 YFF+L ++ L + S L N++ ++ SGL+ +SR Sbjct: 180 ATPVLKESLHYFFKLPDFEAMLKQWTRSG---ALQESVANKLAEWLDSGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267 +G +IPD P YVW+DA Y+ + L P+ FW D H I KDI Sbjct: 237 YFGFEIPDAPGKYFYVWLDAPIGYMPSFKNLCTRRPELDFDAFWGKDSSAELYHFIAKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L A P + HG++ G+K+SKS G + ++ + + LRY Sbjct: 297 VNFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLRY 356 Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGA 382 + ++ G +D + + ++VN+DL + N+ SR I K G++ P P Sbjct: 357 YYASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAP-- 414 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440 +L+ I E + + +RA+ ++++L + + Q PW L K Sbjct: 415 ------ELLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQ 468 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 D+ V + + + RQL I L+ +PKLA L VA Sbjct: 469 QDKVQAVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVA 508 >gi|229846827|ref|ZP_04466934.1| methionyl-tRNA synthetase [Haemophilus influenzae 7P49H1] gi|229810316|gb|EEP46035.1| methionyl-tRNA synthetase [Haemophilus influenzae 7P49H1] Length = 682 Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 133/503 (26%), Positives = 236/503 (46%), Gaps = 45/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G + F D HG I A Sbjct: 7 KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + RD A +IS+D++ T + + ++ K+ G I Sbjct: 67 GITPEELIAKAKADHMRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A++ L + S L E N++ + +SGL+ +SR +G Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWP----ADL-HVIGKDILRFHA 272 +IP YVW+DA Y+ + L + D +FW A+L H IGKDI+ FH+ Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCEREDIDFNEFWAEGSDAELYHFIGKDIVYFHS 301 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF+HG++ G K+SKS G I + + + LRY+ + Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361 Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + +D ++ + +RVN D+ N + NL SR+ I K ++G + DE++ Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLSD----KLEDEALF 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + ++I +++ ++A+ ++++L + ++Y D + PW + K A V Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +PKLA + Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500 >gi|296505474|ref|YP_003667174.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|296326526|gb|ADH09454.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171] Length = 544 Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 131/513 (25%), Positives = 238/513 (46%), Gaps = 45/513 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T K DQ F+ L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 LTAKEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKIVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADL---HVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G +FW ++ +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILESYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + + Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + RV + I + AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 EGLYKRVGEAIEQTK----FKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V +I A LL+ F+P + ++ + L + N Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506 >gi|294790187|ref|ZP_06755345.1| methionine--tRNA ligase [Scardovia inopinata F0304] gi|294458084|gb|EFG26437.1| methionine--tRNA ligase [Scardovia inopinata F0304] Length = 632 Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 146/529 (27%), Positives = 236/529 (44%), Gaps = 68/529 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A Sbjct: 4 VLVAVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVQADAE 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV+ + D+ +R L +SYD F RTT K H + ++K+ G IY+G Sbjct: 64 GVSAQELADRYNRVIAQDLCNLGLSYDLFTRTTTKNHEKVVQDMFKQCLKNGYIYQGTQM 123 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QWM 160 S + D + Y GA G + N + ++ Sbjct: 124 VAISPSNGRTLPDRYIEGTCPLCGYDGARGDQCDNCGNELDSIDLINPRSKINGEIPRFE 183 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWG 217 E + YF L A + L++ ++ + R VI+F GL D R + +WG Sbjct: 184 ETDHYFLDLPALAEANLAWLKTRKNW------RTNVINF-SLGLFDEVKPRAITRDINWG 236 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFW-----PADLHVIG 264 I IP D+P +YVW DA+ YL+ + G ++W PA + +G Sbjct: 237 IPIPVDGWVDNPDKKLYVWFDAVIGYLSASIEWARRQGDPDLWRQWWNDPESPA-YYFMG 295 Query: 265 KDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNV 310 KD + FH+ WP+ +L+ N L LP +V + F+ +G+K S S G V Sbjct: 296 KDNITFHSQIWPSEILAYNGEGSKGGEPGGLGRLNLPTEVVASEFLSMEGKKFSSSRGIV 355 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 I +++ VDA+RY++ D + + N +L + GNLV+R ++ Sbjct: 356 IYVKDILSRYQVDAVRYYISIAGPETSDSDFTWSEFVRHNNEELVSSWGNLVNRVAVLLY 415 Query: 371 KDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428 K++ G IP A + D +L + +++ AL + + +V E++RY Sbjct: 416 KNF-GQIPQIELTALEDMDRDLLKTTEEGFHTVGSLIESHRQKAALTEAMHIVQEINRYV 474 Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A +PW+LK NP+R + VL+ + + LL F+P A K+++ L Sbjct: 475 SATEPWKLKD-NPERLAAVLHTAAQAVMDANTLLAPFLPHSAQKVYETL 522 >gi|30265080|ref|NP_847457.1| methionyl-tRNA synthetase [Bacillus anthracis str. Ames] gi|47530586|ref|YP_021935.1| methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187891|ref|YP_031144.1| methionyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|65317025|ref|ZP_00389984.1| COG0143: Methionyl-tRNA synthetase [Bacillus anthracis str. A2012] gi|165870881|ref|ZP_02215533.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167634931|ref|ZP_02393249.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|167639976|ref|ZP_02398244.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|170685894|ref|ZP_02877117.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|170707026|ref|ZP_02897483.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|177652275|ref|ZP_02934778.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190567277|ref|ZP_03020192.1| putative methionyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|227817810|ref|YP_002817819.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. CDC 684] gi|229602311|ref|YP_002869277.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0248] gi|254687371|ref|ZP_05151228.1| methionyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066] gi|254725384|ref|ZP_05187167.1| methionyl-tRNA synthetase [Bacillus anthracis str. A1055] gi|254733720|ref|ZP_05191436.1| methionyl-tRNA synthetase [Bacillus anthracis str. Western North America USA6153] gi|254740558|ref|ZP_05198249.1| methionyl-tRNA synthetase [Bacillus anthracis str. Kruger B] gi|254753180|ref|ZP_05205216.1| methionyl-tRNA synthetase [Bacillus anthracis str. Vollum] gi|254761523|ref|ZP_05213544.1| methionyl-tRNA synthetase [Bacillus anthracis str. Australia 94] gi|68566041|sp|Q81XF9|SYM2_BACAN RecName: Full=Methionyl-tRNA synthetase 2; AltName: Full=Methionine--tRNA ligase 2; Short=MetRS 2 gi|254782848|sp|C3P025|SYM_BACAA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|254782849|sp|C3LD96|SYM_BACAC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|30259757|gb|AAP28943.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. Ames] gi|47505734|gb|AAT34410.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181818|gb|AAT57194.1| methionyl-tRNA synthetase, putative [Bacillus anthracis str. Sterne] gi|164713390|gb|EDR18915.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167512057|gb|EDR87435.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|167529681|gb|EDR92430.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|170128129|gb|EDS96999.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|170670358|gb|EDT21098.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|172082281|gb|EDT67347.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190561781|gb|EDV15751.1| putative methionyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|227006250|gb|ACP15993.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. CDC 684] gi|229266719|gb|ACQ48356.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0248] Length = 544 Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 136/540 (25%), Positives = 246/540 (45%), Gaps = 54/540 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDCYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD---LHVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G + FW + +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDREFWDGEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL+ Sbjct: 298 SVIWPAVLLGIGEGTIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLI 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + I Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 R+ + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V +I A LL+ F+P + +I + L + + N +P L D + P F Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524 >gi|228936320|ref|ZP_04099118.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228823152|gb|EEM68986.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 544 Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 136/540 (25%), Positives = 246/540 (45%), Gaps = 54/540 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL---HVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G + FW + +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDREFWDGEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL+ Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLI 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + I Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 R+ + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V +I A LL+ F+P + +I + L + + N +P L D + P F Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524 >gi|330829598|ref|YP_004392550.1| methionyl-tRNA synthetase [Aeromonas veronii B565] gi|328804734|gb|AEB49933.1| Methionyl-tRNA synthetase [Aeromonas veronii B565] Length = 692 Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 130/503 (25%), Positives = 226/503 (44%), Gaps = 43/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ R+ R+ G V F D HG I AQ Sbjct: 22 KMLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHQVHFICADDAHGTPIMLKAQQM 81 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S+ + +IS+D++ T + + +++ ++ + G I S Sbjct: 82 GITPEEMIAAVSKEHQADFAGFNISFDNYHSTHSDENRELAELIYGRLKNGGFIKSRTIS 141 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------------ 161 + +++ + D KG + QY A ++P + ++ Sbjct: 142 QLFD-PEKSMFLPDRFVKGTCPKCKSPEQYGDNCDSCGATYSPTELIDPKSAVSGATPVM 200 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E +FF L ++ L + + E N++ + +SGL+ ++R +G + Sbjct: 201 KDSEHFFFDLPQFEKWLSEWVRGSG--AIQEEMANKMQEWFESGLQQWDITRDAPYFGFE 258 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHA 272 IP P YVW+DA Y+ + L N G +W AD H IGKDI FH Sbjct: 259 IPGAPGKYFYVWLDAPIGYMASFKNLCNKRGDIDFDSYWKADSDAELYHFIGKDIAYFHC 318 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WP+ L AN P KV HG++ G K+SKS G I + + + LRY+ + Sbjct: 319 LFWPSMLEGANFRKPTKVNVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYYAAK 378 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + D + + +RVNAD+ N + NL SR+ I K + G + A T ++ + Sbjct: 379 LNSRIDDLDLNLEDFVQRVNADVVNKLVNLASRNAGFIAKRFGGKL----AATCAEPELY 434 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + I E +++ RA+ ++++L + +RY D + PW + K A V Sbjct: 435 AEFANARTAIAEAYESREFSRAIREIMALADKANRYVDDKAPWVIAKQEGADAELQAVCS 494 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P LA + Sbjct: 495 VGINLFRVLMAYLKPVMPLLAER 517 >gi|262166073|ref|ZP_06033810.1| methionyl-tRNA synthetase [Vibrio mimicus VM223] gi|262025789|gb|EEY44457.1| methionyl-tRNA synthetase [Vibrio mimicus VM223] Length = 683 Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 138/504 (27%), Positives = 224/504 (44%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ S RD A DIS+D++ T + + ++ ++ G I Sbjct: 67 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160 S + E + D V KG A G+ Y+ NP + Sbjct: 126 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + + GL+ +SR +G Sbjct: 185 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + G ++W D H IGKDI+ FH Sbjct: 242 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G + + + + LRY+ Sbjct: 302 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVNAD+ N I NL SR+ I K +DG + A E Sbjct: 362 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAQFAEPELYAEF 421 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVL 448 R I E + + RA+ ++ +L + ++Y D + PW + K+ + D+A + Sbjct: 422 AGAADR----IAELFETREFGRAIREITALADKANQYVDEKAPWVVAKQESQDQALQDIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P LA + Sbjct: 478 TVGINLFRVLVTYLKPVMPALAER 501 >gi|148546380|ref|YP_001266482.1| methionyl-tRNA synthetase [Pseudomonas putida F1] gi|148510438|gb|ABQ77298.1| methionyl-tRNA synthetase [Pseudomonas putida F1] Length = 710 Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 133/521 (25%), Positives = 234/521 (44%), Gaps = 54/521 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E ++ +++A+ Y N H+GH E I D+ RF +L G ++ D HG I Sbjct: 32 MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 91 Query: 61 AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D AD L + +D+F T + + + +++ ++ + G I Sbjct: 92 RAEKEGITPEQLIANVQAEHSSDFADFL-VDFDNFHSTHSEENRELSSLIYSRLREAGHI 150 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQW-------- 159 + ++ ++ + D KG A+ QY A + P + Sbjct: 151 ATRSVTQYFD-PEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAIS 209 Query: 160 ------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + + +FF+L +Q L + S L N++ ++ SGL++ +SR Sbjct: 210 GATPVLRDSQHFFFKLPDFQAMLQQWTRSG---TLQDAVANKLAEWLDSGLQEWDISRDA 266 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPD---------GSKAKFWPADLHV 262 +G +IP +P YVW+DA Y+ + L P+ GSKA+ + H Sbjct: 267 PYFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWNEGSKAELY----HF 322 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 IGKDI+ FHA++WPA L A P V HG++ G K+SKS G I ++ + Sbjct: 323 IGKDIVNFHALFWPAMLEGAGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQP 382 Query: 323 DALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + LRY+ ++ G D + + ++VN+DL + N+ SR I K +G++ Sbjct: 383 EYLRYYYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNEGVMVGGD 442 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439 A E E+ L+ I E + + RA+ ++++L + + + PW L K Sbjct: 443 AAPELTEAFLAAAP----SIAEAYEARDFGRAMREIMALADRANAWIADKAPWSLAKQEG 498 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 D + + + RQL I L+ +P LA L VA Sbjct: 499 KQDEVQAICAQGINLFRQLVIFLKPVLPVLAADAEAFLNVA 539 >gi|49478861|ref|YP_039056.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|68565980|sp|Q6HBM0|SYM1_BACHK RecName: Full=Methionyl-tRNA synthetase 1; AltName: Full=Methionine--tRNA ligase 1; Short=MetRS 1 gi|49330417|gb|AAT61063.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 544 Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 136/540 (25%), Positives = 246/540 (45%), Gaps = 54/540 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL---HVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G + FW + +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDREFWDGEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL+ Sbjct: 298 SVIWPAVLLGIGEGTIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLI 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + I Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 R+ + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V +I A LL+ F+P + +I + L + + N +P L D + P F Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524 >gi|315225784|ref|ZP_07867572.1| methionyl-tRNA synthetase [Parascardovia denticolens DSM 10105] gi|315119916|gb|EFT83048.1| methionyl-tRNA synthetase [Parascardovia denticolens DSM 10105] Length = 626 Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 145/530 (27%), Positives = 238/530 (44%), Gaps = 70/530 (13%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G +VL +GTDEHG I A Sbjct: 7 VLVAVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNEVLMVSGTDEHGTPILVQADAE 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY- 124 GV+ + D+ +R L +SYD F RTT K H + + ++K+ G IYKG Sbjct: 67 GVSAQELADRYNRVIAQDLCNLGLSYDLFTRTTTKNHENVVQEMFKQCLKNGYIYKGTQM 126 Query: 125 -----SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN---------------------PVQ 158 S +L D Y GADG + N PV Sbjct: 127 VAISPSTGRTLPDR-YIEGTCPICGADGARGDQCDNCGNELDPIDLINPRSKINGETPV- 184 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--W 216 + E E YF L A + ++ ++ + R VI+F ++ T D W Sbjct: 185 FQETEHYFLDLPALAEANYAWLKTRQGW------RTNVINFSLGLFNEVEPRAITRDINW 238 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFW-----PADLHVI 263 GI IP D+P +YVW DA+ YL+ + G ++W PA + + Sbjct: 239 GIPIPVDGWIDNPNKRLYVWFDAVIGYLSASIEWARRQGDPDLWRQWWNDPQSPA-YYFM 297 Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WP+ +L N L +P +V + F+ +G+K S S G Sbjct: 298 GKDNITFHSQIWPSEILGYNGQGSKGGEPGEFGELNMPTQVVASEFLSMEGKKFSSSRGI 357 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI +++ VDA+RY++ D + + N +L + GNLV+R ++ Sbjct: 358 VIYVKDILARYQVDAVRYYISIAGPETSDSDFTWAEFVRHNNDELVSSWGNLVNRVAVLL 417 Query: 370 LKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 K++ G IP P F E D+++L + + +++ AL + + +V E+++Y Sbjct: 418 HKNF-GQIPAVDPSDFQEEDKALLKMTEEGFASVGGLIEDHRQKAALTEAMRIVQEINKY 476 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A +PW++K +P R + +LY + + + +L F+P A K+++ L Sbjct: 477 ISATEPWKVKD-DPARLAAILYTSAQAVMDANTMLAPFLPHSAQKVYETL 525 >gi|262368863|ref|ZP_06062192.1| methionyl-tRNA synthetase [Acinetobacter johnsonii SH046] gi|262316541|gb|EEY97579.1| methionyl-tRNA synthetase [Acinetobacter johnsonii SH046] Length = 685 Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 148/545 (27%), Positives = 237/545 (43%), Gaps = 69/545 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ A+ Y N H+GH I AD+ R R G DV + D HG I A+ G Sbjct: 4 ILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEANG 63 Query: 67 VTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY----- 120 ++ + + + RD D + +D + T + ++ K + G+I Sbjct: 64 ISPEDQIANVQKEHIRDF-DGFGVHFDHYDSTHSDENRSRASEIYVKNREAGNIAIRPVN 122 Query: 121 ------KGCY-------SGWYSLRDEAYYNDD-EVYKGADGQYYNAQH--NPVQWME--- 161 KG + + E Y D EV G YNA NP + Sbjct: 123 QLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDACEVC----GTTYNATELLNPKSTLSGAT 178 Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + YFF+L + + L + LP+ N++ + ++GL D +SR + Sbjct: 179 PVEKSSDHYFFKLPNFSEYLQKWTRDQGR--LPVSIANKLDEWFEAGLSDWDISRDAPYF 236 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTT-TGYLD--NPDGSKAKFWPAD-----LHVIGKDIL 268 G +IPD P YVW+DA Y+++ Y+ PD S FW D H IGKDI+ Sbjct: 237 GFEIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPDLSFDDFWKKDSDKEVYHFIGKDIV 296 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FHA++WPA L AN P +F +GF+ G+K+SKS G I +E + + LRY+ Sbjct: 297 YFHALFWPAMLEGANYRTPSGLFVNGFLTVNGQKMSKSRGTFIKAETYLEHLNPEYLRYY 356 Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 +++ +D + D ++VN+DL + N+ SR I +D + A E Sbjct: 357 FASKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINTKFDNKLSATCAEPELV 416 Query: 388 ESILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--R 443 +S + + + E RE A+ ++++L + ++Y D +KPW L K + + Sbjct: 417 QSFIDAGDSIAKAYEARE------FSAAIREIMALADKANQYIDEKKPWALAKVEGEEQQ 470 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI--------FDI-----LFVADENRCFQSLD 490 V V + + RQLA+ L +P LA ++ FD V E FQ L Sbjct: 471 VHNVCSVGINLFRQLAVYLAPVLPTLAAQVQAFLKLDRFDFASAQTALVDHEIALFQPLM 530 Query: 491 QRLKP 495 QR+ P Sbjct: 531 QRVDP 535 >gi|262280117|ref|ZP_06057902.1| methionyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] gi|262260468|gb|EEY79201.1| methionyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] Length = 688 Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 145/543 (26%), Positives = 240/543 (44%), Gaps = 63/543 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I AD+ R R G DV + D HG I A+ Sbjct: 3 KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62 Query: 66 GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + + + RD D + +D + T + ++ K + G+I Sbjct: 63 GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161 + + ++ + D KG ++ QY YNA NP + Sbjct: 122 TQLFD-PEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPV 180 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + YFF+L + + L + + E LP+ N++ + +SGL D +SR +G Sbjct: 181 EKSSDHYFFKLPNFAEYLQKW--TRDEGRLPVSIANKLDEWFESGLTDWDISRDAPYFGF 238 Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDILRF 270 +IPD P YVW+DA Y+++ Y+ PD S FW D H IGKDI+ F Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLSFDDFWKKDSQNDVYHFIGKDIVYF 298 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 HA++WPA L AN P +F +GF+ G+K+SKS G I ++ + + LRY+ Sbjct: 299 HALFWPAMLDGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ +D + D ++VN+DL + N+ SR I +++ + A +E +S Sbjct: 359 SKLSDKVEDSDLNLDDFIQKVNSDLVGKVVNIASRCAKFINSNFNNTLSAECAESELVQS 418 Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446 + + E RE A+ ++++L ++Y D +KPW L K Sbjct: 419 FIDAGDSIASAYEARE------FSMAIREIMALADRANQYIDEKKPWALAKQEGQEQQVL 472 Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQR 492 V V + + RQLA+ L +P LA ++ L V+ E FQ L QR Sbjct: 473 DVCSVGINLFRQLAVYLAPVLPTLAEQVQSFLKLESFNFESRKQILVSHEIAQFQPLMQR 532 Query: 493 LKP 495 + P Sbjct: 533 VDP 535 >gi|167035308|ref|YP_001670539.1| methionyl-tRNA synthetase [Pseudomonas putida GB-1] gi|187647754|sp|B0KUD8|SYM_PSEPG RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|166861796|gb|ABZ00204.1| methionyl-tRNA synthetase [Pseudomonas putida GB-1] Length = 679 Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 132/521 (25%), Positives = 235/521 (45%), Gaps = 54/521 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E ++ +++A+ Y N H+GH E I D+ RF ++ G ++ D HG I Sbjct: 1 MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D AD L + +D+F T + + + +++ ++ + G I Sbjct: 61 RAEKEGITPEQLIANVQAEHSSDFADFL-VDFDNFHSTHSEENRELSSLIYTRLREAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQW-------- 159 + ++ ++ + D KG A+ QY A + P + Sbjct: 120 ATRSVTQYFD-PEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAIS 178 Query: 160 ------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + + +FF+L +Q L + S L N++ ++ SGL++ +SR Sbjct: 179 GATPVLRDSQHFFFKLPDFQAMLQQWTRSG---TLQDAVANKLAEWLDSGLQEWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPD---------GSKAKFWPADLHV 262 +G +IP +P YVW+DA Y+ + L P+ GSKA+ + H Sbjct: 236 PYFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWNEGSKAELY----HF 291 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 IGKDI+ FHA++WPA L A P V HG++ G K+SKS G I ++ + Sbjct: 292 IGKDIVNFHALFWPAMLEGAGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQP 351 Query: 323 DALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + LRY+ ++ G D + + ++VN+DL + N+ SR I K +G++ + Sbjct: 352 EYLRYYYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNEGVMVSGD 411 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439 A E E+ L+ I E + + RA+ ++++L + + + PW L K Sbjct: 412 AAPELTEAFLTAAP----SIAEAYEARDFGRAMREIMALADRANAWIADKAPWSLAKQEG 467 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 D + + + RQL I L+ +P LA L VA Sbjct: 468 KQDEVQAICAQGINLFRQLVIFLKPVLPVLAADAEAFLNVA 508 >gi|294786251|ref|ZP_06751505.1| methionine--tRNA ligase [Parascardovia denticolens F0305] gi|294485084|gb|EFG32718.1| methionine--tRNA ligase [Parascardovia denticolens F0305] Length = 623 Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 145/530 (27%), Positives = 238/530 (44%), Gaps = 70/530 (13%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G +VL +GTDEHG I A Sbjct: 4 VLVAVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNEVLMVSGTDEHGTPILVQADAE 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY- 124 GV+ + D+ +R L +SYD F RTT K H + + ++K+ G IYKG Sbjct: 64 GVSAQELADRYNRVIAQDLCNLGLSYDLFTRTTTKNHENVVQEMFKQCLKNGYIYKGTQM 123 Query: 125 -----SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN---------------------PVQ 158 S +L D Y GADG + N PV Sbjct: 124 VAISPSTGRTLPDR-YIEGTCPICGADGARGDQCDNCGNELDPIDLINPRSKINGETPV- 181 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--W 216 + E E YF L A + ++ ++ + R VI+F ++ T D W Sbjct: 182 FQETEHYFLDLPALAEANYAWLKTRQGW------RTNVINFSLGLFNEVEPRAITRDINW 235 Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFW-----PADLHVI 263 GI IP D+P +YVW DA+ YL+ + G ++W PA + + Sbjct: 236 GIPIPVDGWIDNPNKRLYVWFDAVIGYLSASIEWARRQGDPDLWRQWWNDPQSPA-YYFM 294 Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WP+ +L N L +P +V + F+ +G+K S S G Sbjct: 295 GKDNITFHSQIWPSEILGYNGQGSKGGEPGEFGELNMPTQVVASEFLSMEGKKFSSSRGI 354 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI +++ VDA+RY++ D + + N +L + GNLV+R ++ Sbjct: 355 VIYVKDILARYQVDAVRYYISIAGPETSDSDFTWAEFVRHNNDELVSSWGNLVNRVAVLL 414 Query: 370 LKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 K++ G IP P F E D+++L + + +++ AL + + +V E+++Y Sbjct: 415 HKNF-GQIPAVDPSDFQEEDKALLKMTEEGFASVGGLIEDHRQKAALTEAMRIVQEINKY 473 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A +PW++K +P R + +LY + + + +L F+P A K+++ L Sbjct: 474 ISATEPWKVKD-DPARLAAILYTSAQAVMDANTMLAPFLPHSAQKVYETL 522 >gi|317474804|ref|ZP_07934078.1| tRNA synthetase class I [Bacteroides eggerthii 1_2_48FAA] gi|316909485|gb|EFV31165.1| tRNA synthetase class I [Bacteroides eggerthii 1_2_48FAA] Length = 680 Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 144/516 (27%), Positives = 246/516 (47%), Gaps = 49/516 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DV+F G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVVFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + IS+D + RTT K HHDT ++K+ DKG+ Sbjct: 63 RAKKEGITPQDVVDRYHTLIKQSFEEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + A+G Y + + Sbjct: 123 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210 PV E + ++ L ++ L + + H E+ R N + S++ GL+ ++S Sbjct: 183 QPVM-RETKHWYLPLDKHEAWLRQWILDDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236 Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIG 264 R DWGI +P + ++YVW DA Y++ T L PD S K+W +H IG Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLVHFIG 293 Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--G 321 KD + FH I +PA L + + LP V S+ F+ +G+KIS S + E + + Sbjct: 294 KDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPGK 353 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D LRY L KD + + R N +L GN V+R++ + K +DG +P G Sbjct: 354 QDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGTVPAAG 413 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 T+ D+ L + V E+ + + A + ++L ++Y +PW+L KT+ Sbjct: 414 ELTDYDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDM 473 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 R +T+L ++++++ LAI + F+P + K+ +L Sbjct: 474 SRVATILNISLQLVANLAIAFEPFLPFSSEKLRKML 509 >gi|62185234|ref|YP_220019.1| methionyl-tRNA synthetase [Chlamydophila abortus S26/3] gi|68565960|sp|Q5L5M3|SYM_CHLAB RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|62148301|emb|CAH64068.1| methionyl-tRNA synthetase [Chlamydophila abortus S26/3] Length = 551 Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 144/510 (28%), Positives = 232/510 (45%), Gaps = 44/510 (8%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++A+ Y N H GH A + ADV ARF RL G DVL+ G+DE+G I A+ Sbjct: 4 RVLITSALPYANGPLHFGHIAGAYLPADVYARFRRLLGDDVLYICGSDEYGIAITLNAER 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG+ + +V+ + +D D L IS D F RTT H + + ++ KG I Sbjct: 64 AGMGYQEYVNMYHKIHKDTFDKLGISIDFFSRTTNPFHKKLVQDFYTELQSKGLIENQIS 123 Query: 125 SGWYSLRDEAYYND-----------------DEVYK-GADGQYYNAQH-------NPVQW 159 YS + + D DE K GAD + + H + + Sbjct: 124 LQLYSEEENRFLADRYVEGTCPKCGFDGARGDECQKCGADYEATDLVHPRSKLSGSQLVL 183 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E F L + LL+Y ++ LP R V ++K+ L+ +++R WGI Sbjct: 184 KETEHAFLHLERMVEPLLAYIDT---CYLPEHIRKFVTDYIKN-LRPRAITRD-LSWGIP 238 Query: 220 IPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIGKDILRFH 271 +PD P + YVW DA Y++ T L+ P+ K FW D + IGKD + FH Sbjct: 239 VPDFPNKVFYVWFDAPIGYISGTMDWAASLNTPEAWK-DFWLEDSTEYVQFIGKDNIPFH 297 Query: 272 AIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 A +PA L ++P K + S F L +G + SKS GN ID ++ +D LRY L Sbjct: 298 AAIFPAMELGQSIPYKKMDALVSSEFYLLEGCQFSKSEGNYIDIDTFLDTYSLDKLRYVL 357 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDE 388 D + K R N++L GN + R + K+ + + + + D+ Sbjct: 358 AATAPETSDSEFTFMDFKTRCNSELVGKFGNFIHRVLVFAEKNGFKELAYSANLLEDQDK 417 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTV 447 L +++++ +E+ + +A ++ L + + YF+ Q PW+L K R V Sbjct: 418 QFLDRAQQIVRDAQEHYSQYSLRKACCAIMELAALGNVYFNDQAPWKLLKEGLSHRVEAV 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L+ + LA++ +P A +I+ +L Sbjct: 478 LFCACYCQKLLALISYPIIPGTAWEIWRML 507 >gi|258621822|ref|ZP_05716853.1| methionyl-tRNA synthetase [Vibrio mimicus VM573] gi|258586053|gb|EEW10771.1| methionyl-tRNA synthetase [Vibrio mimicus VM573] Length = 729 Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 138/504 (27%), Positives = 223/504 (44%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 53 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 112 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ S RD A DIS+D++ T + + ++ ++ G I Sbjct: 113 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 171 Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160 S + E + D V KG A G+ Y+ NP + Sbjct: 172 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 230 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + + GL+ +SR +G Sbjct: 231 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 287 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + G ++W D H IGKDI+ FH Sbjct: 288 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 347 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G + + + + LRY+ Sbjct: 348 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 407 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVNAD+ N I NL SR+ I K +DG + A E Sbjct: 408 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAQFAEPELYAEF 467 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVL 448 R I E + + RA+ ++ +L + ++Y D + PW + K+ D+A + Sbjct: 468 AGAADR----IAELFETREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDIC 523 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P LA + Sbjct: 524 TVGINLFRVLVTYLKPVMPALAER 547 >gi|116327392|ref|YP_797112.1| methionyl-tRNA synthetase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331994|ref|YP_801712.1| methionyl-tRNA synthetase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280273|sp|Q04Q66|SYM_LEPBJ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|122284807|sp|Q054R6|SYM_LEPBL RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|116120136|gb|ABJ78179.1| Methionine tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125683|gb|ABJ76954.1| Methionine tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 704 Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 143/564 (25%), Positives = 246/564 (43%), Gaps = 68/564 (12%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ RF + G + F D HG + AA+ Sbjct: 7 QRKILVTSALPYANGPIHLGHVLEGIQTDIWVRFQKAIGNECYFFCADDTHGTPVMLAAR 66 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 +T + +++ + I+YD++ T K + + + ++ K+ +KG I K Sbjct: 67 KEKITPEQLIERVGQEHYTDLTSFGINYDNYDSTHSKANQEISKDIYLKLKEKGHISKRS 126 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEE---------- 162 Y +D + D + G + + A +NP ++ Sbjct: 127 IEQAYCEKDRMFLPDRFIKGTCPNCNSKNQYGDNCEVCGATYNPKDLIDSHCTLCGTPPV 186 Query: 163 ----EGYFFRLSAYQDK---------LLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209 + FF+L + K L S+ E+ + ++ + +GL+D + Sbjct: 187 VKNSDHIFFKLGNFHKKTEQSNVDFDLQSWIETSEAVSESEGVKKKLKEWFDAGLQDWDI 246 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT------GYLDNPDGSKAKFWPAD---- 259 SR +G +IP + YVW+DA Y+ ++ + + P+ + FW Sbjct: 247 SRDGPYFGFEIPSEKNKYFYVWLDAPVGYMASSKNFFEKNFPNEPNKFDS-FWKDKNSEI 305 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 +H IGKDIL FH ++WPA L + P K+ HGFI GEK+SKS G I + Sbjct: 306 VHFIGKDILYFHTLFWPAMLEGSGYRSPSKIHVHGFIGVNGEKMSKSRGTFIKAKTFAKF 365 Query: 320 VGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 + + LR++L ++ G D D +VNADL + N VSR + IL D + Sbjct: 366 LDAEHLRFYLAAKLGPGMDDIDLSFDDFVNKVNADLVGNLINSVSRVSTTIL---DTLDR 422 Query: 379 TPGAFTESDESILS--VCSRVLQEIRENMQNQLIHRALAQ---------VISLVSEVDRY 427 T G +E ++L + V R++ +I A Q + L V+RY Sbjct: 423 TLGTVSEEGLALLEEILTQPVKTGTRDDSIQNIIKTAYEQRNYAKVMREITRLGDRVNRY 482 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487 + PW+L K NP++A ++ + R LAI L VPK++ +I+ +L + F+ Sbjct: 483 VNDNAPWKLIKENPEKAREIVTAVLNASRFLAIYLYPVVPKISEQIYKLLNLKGSPE-FK 541 Query: 488 SLDQ-------RLKPGFMLHKTFD 504 LD+ ++ P M+ K D Sbjct: 542 DLDKSRILEKTKINPYEMITKRVD 565 >gi|298252448|ref|ZP_06976243.1| methionyl-tRNA synthetase [Gardnerella vaginalis 5-1] gi|297533338|gb|EFH72221.1| methionyl-tRNA synthetase [Gardnerella vaginalis 5-1] Length = 623 Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 146/529 (27%), Positives = 244/529 (46%), Gaps = 68/529 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A Sbjct: 4 ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ + ++ +R +D+ D L +SYD F RTT H + ++++ G IYKG Sbjct: 64 GVSAQELANRYNRVITKDLCD-LGLSYDLFTRTTTANHEHVVQEMFRQCLKNGYIYKGTQ 122 Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158 S +L D Y GADG + NPV + Sbjct: 123 KVAISPSTGRTLPDR-YIEGTCPLCGADGARGDQCDACGNELDPDELINPVSKINGETPR 181 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF---VKSGLKDLSLSRKTFD 215 + E E YF L A + +++ S + R VI+F + + +K +++R D Sbjct: 182 FEETEHYFLDLPALAEANVNWLHSREGW------RTNVINFSLGLFNEVKPRAITRD-ID 234 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVI 263 WGI +P D+P +YVW DA+ YL+ + G + W D + + Sbjct: 235 WGIPVPVEGWIDNPNKRLYVWFDAVIGYLSASIEWARRQGKPDAWRDWWCDPKSPGYYFM 294 Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WP+ +L+ N L +P++V + F+ +G+K S S G Sbjct: 295 GKDNITFHSQIWPSEMLAYNGAGSKGGEAGIYGPLNMPEQVVASEFMTMEGKKFSSSRGI 354 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI +++ VDA+RY++ D + + N +LA GNLV+R ++I Sbjct: 355 VIYVKDILARYPVDAVRYYISIAGPENSDADFTWAEFARHNNEELAASWGNLVNRVANLI 414 Query: 370 LKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428 K++ + P + T D ++L S + ++ AL + + +V+++++Y Sbjct: 415 NKNFGAIPPLDEDSMTAMDRALLDQTSDAFALVGSLIERHRQKNALTEAMRVVADINKYI 474 Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A +PW++K + DR TVL+V + + LL F+P A K+++ L Sbjct: 475 SATEPWKIKD-DEDRLGTVLHVAAQAVSDANHLLAPFLPHAAQKVWEAL 522 >gi|30023071|ref|NP_834702.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|229130292|ref|ZP_04259251.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4] gi|68566040|sp|Q815U6|SYM2_BACCR RecName: Full=Methionyl-tRNA synthetase 2; AltName: Full=Methionine--tRNA ligase 2; Short=MetRS 2 gi|29898631|gb|AAP11903.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|228653225|gb|EEL09104.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4] Length = 544 Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 130/513 (25%), Positives = 238/513 (46%), Gaps = 45/513 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K DQ F+ L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKIVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G +FW ++ +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + + Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKRSIEVELKDKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V +I A LL+ F+P + ++ + L + N Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506 >gi|218131529|ref|ZP_03460333.1| hypothetical protein BACEGG_03148 [Bacteroides eggerthii DSM 20697] gi|217986461|gb|EEC52798.1| hypothetical protein BACEGG_03148 [Bacteroides eggerthii DSM 20697] Length = 680 Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 142/513 (27%), Positives = 245/513 (47%), Gaps = 43/513 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DV+F G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVVFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + IS+D + RTT K HHDT ++K+ DKG+ Sbjct: 63 RAKKEGITPQDVVDRYHTLIKQSFEEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + A+G Y + + Sbjct: 123 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 PV E + ++ L ++ L + + H E+ + + S++ GL+ ++SR Sbjct: 183 QPVM-RETKHWYLPLDKHEAWLRQWILDDHKEWRPNV--YGQCKSWLDMGLQPRAVSRD- 238 Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDI 267 DWGI +P + ++YVW DA Y++ T L PD S K+W +H IGKD Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLVHFIGKDN 296 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324 + FH I +PA L + + LP V S+ F+ +G+KIS S + E + + D Sbjct: 297 IVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPGKQDV 356 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N +L GN V+R++ + K +DG +P G T Sbjct: 357 LRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGTVPAAGELT 416 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 + D+ L + V E+ + + A + ++L ++Y +PW+L KT+ R Sbjct: 417 DYDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMSRV 476 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +T+L ++++++ LAI + F+P + K+ +L Sbjct: 477 ATILNISLQLVANLAIAFEPFLPFSSEKLRKML 509 >gi|68250200|ref|YP_249312.1| methionyl-tRNA synthetase [Haemophilus influenzae 86-028NP] gi|81335378|sp|Q4QJZ5|SYM_HAEI8 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|68058399|gb|AAX88652.1| methionyl-tRNA synthetase [Haemophilus influenzae 86-028NP] Length = 682 Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 133/503 (26%), Positives = 236/503 (46%), Gaps = 45/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G + F D HG I A Sbjct: 7 KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + RD A +IS+D++ T + + ++ K+ G I Sbjct: 67 GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A++ L + S L E N++ + +SGL+ +SR +G Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272 +IP YVW+DA Y+ + L +G +FW A+L H IGKDI+ FH+ Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF+HG++ G K+SKS G I + + + LRY+ + Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361 Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + +D ++ + +RVN D+ N + NL SR+ I K ++G + DE++ Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLSD----KLEDEALF 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + ++I +++ ++A+ ++++L + ++Y D + PW + K A V Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +PKLA + Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500 >gi|288940932|ref|YP_003443172.1| methionyl-tRNA synthetase [Allochromatium vinosum DSM 180] gi|288896304|gb|ADC62140.1| methionyl-tRNA synthetase [Allochromatium vinosum DSM 180] Length = 683 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 129/505 (25%), Positives = 224/505 (44%), Gaps = 42/505 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + + I++A+ Y N HIGH E I D+ ARF ++ G + + D HG I Sbjct: 1 MSQPRDILITSALPYANGPIHIGHLVEYIQTDIWARFQKMRGHNCWYVCADDAHGTPIML 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + + + + + + +D++ T + +++++ D G I Sbjct: 61 RARQEGITPEQLIARVAEEHQADFAAFRVGFDNYHSTHSPENQHYATLIYERNRDAGHIA 120 Query: 121 KGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQW---------- 159 K + Y ++ + D E K GA QY A ++P + Sbjct: 121 KRMITQAYDPVEQMFLPDRFIKGECPKCGAPDQYGDNCEACGASYSPAELKNPRSAVSGA 180 Query: 160 ----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 E + YFFRL ++ L + L E N++ + ++GL++ +SR Sbjct: 181 VPEQRESDHYFFRLGDFETMLKEWTRGGS---LQKEVANKLDEWFEAGLQEWDISRDAPY 237 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDIL 268 +G +IPD P YVW+DA Y+ + L P +FW D H IGKDI+ Sbjct: 238 FGFEIPDHPGKFFYVWLDAPIGYMASFQNLCDKTPGLDFDRFWGRDSTAELYHFIGKDII 297 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FHA+++PA L A P +F+HGF+ G+K+SKS G I ++ + + LRY+ Sbjct: 298 YFHALFFPAMLHGAGFRTPSAIFAHGFLTVDGQKMSKSRGTFIKARTYLDHLNPEYLRYY 357 Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ D + + RVNADL + N+ SR I K +DG + GA E + Sbjct: 358 FAAKLGSSVDDIDLNLEDFTARVNADLVGKVVNIASRCAGFIGKRFDGRL--SGALAEPE 415 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446 + + I + + RA+ ++++L ++Y D + PW + K + A Sbjct: 416 --LFAEFIAAGDSIAAAYEKREFSRAVREIMALADRANQYIDEKAPWVVAKQDGREAELQ 473 Query: 447 -VLYVTVEVIRQLAILLQAFVPKLA 470 + + + + R L L+ +P A Sbjct: 474 DICSMGLNLFRVLIGYLRPILPATA 498 >gi|187649785|sp|A5VZI8|SYM_PSEP1 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS Length = 679 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 133/521 (25%), Positives = 234/521 (44%), Gaps = 54/521 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E ++ +++A+ Y N H+GH E I D+ RF +L G ++ D HG I Sbjct: 1 MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D AD L + +D+F T + + + +++ ++ + G I Sbjct: 61 RAEKEGITPEQLIANVQAEHSSDFADFL-VDFDNFHSTHSEENRELSSLIYSRLREAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQW-------- 159 + ++ ++ + D KG A+ QY A + P + Sbjct: 120 ATRSVTQYFD-PEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAIS 178 Query: 160 ------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + + +FF+L +Q L + S L N++ ++ SGL++ +SR Sbjct: 179 GATPVLRDSQHFFFKLPDFQAMLQQWTRSG---TLQDAVANKLAEWLDSGLQEWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPD---------GSKAKFWPADLHV 262 +G +IP +P YVW+DA Y+ + L P+ GSKA+ + H Sbjct: 236 PYFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWNEGSKAELY----HF 291 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 IGKDI+ FHA++WPA L A P V HG++ G K+SKS G I ++ + Sbjct: 292 IGKDIVNFHALFWPAMLEGAGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQP 351 Query: 323 DALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + LRY+ ++ G D + + ++VN+DL + N+ SR I K +G++ Sbjct: 352 EYLRYYYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNEGVMVGGD 411 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439 A E E+ L+ I E + + RA+ ++++L + + + PW L K Sbjct: 412 AAPELTEAFLAAAP----SIAEAYEARDFGRAMREIMALADRANAWIADKAPWSLAKQEG 467 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 D + + + RQL I L+ +P LA L VA Sbjct: 468 KQDEVQAICAQGINLFRQLVIFLKPVLPVLAADAEAFLNVA 508 >gi|229094153|ref|ZP_04225233.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-42] gi|228689256|gb|EEL43077.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-42] Length = 544 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 136/540 (25%), Positives = 246/540 (45%), Gaps = 54/540 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL---HVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G + FW ++ +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDREFWDSEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + I Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 R+ + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V +I A LL+ F+P + +I + L + + N +P L D + P F Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524 >gi|85000239|ref|XP_954838.1| methionyl-tRNA synthetase [Theileria annulata strain Ankara] gi|65302984|emb|CAI75362.1| methionyl-tRNA synthetase, putative [Theileria annulata] Length = 884 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 85/237 (35%), Positives = 142/237 (59%), Gaps = 2/237 (0%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 ++ ++ ++++AIAY N PH+GHAYE ++ DV++R++R+ G V+F+TGTDEHG K+ Sbjct: 288 LENKKPYHLASAIAYTNGLPHVGHAYEAVVCDVISRYYRMFGRRVIFSTGTDEHGIKVLT 347 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ T + S F+ L + YD FIRTT + H + +W+ + KGDIY Sbjct: 348 TAKQQNKTPIEVCNYYSNEFKKFYKRLLVEYDRFIRTTSESHMKAAKTIWRTVFKKGDIY 407 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 G Y+G+YS+R+E + + E K D + P M E YFF++ Y+ +L+ Y Sbjct: 408 LGEYNGYYSMREERFIPNTEA-KLTDFK-DPVSGKPYDLMSESSYFFKMERYRTQLVDYI 465 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237 ++ +FI P + +NE+++ +K L DLS+SR +FDWGI++P I+ +++ N Sbjct: 466 NTNQDFIYPKKVKNEILTRLKDQLDDLSISRTSFDWGIEVPSTDDIIITEYVNNDVN 522 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 86/262 (32%), Positives = 149/262 (56%), Gaps = 9/262 (3%) Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276 K ++ +++MYVW DAL+ Y+T++G ++ S+ +WP DL VIGKDI F ++ Sbjct: 589 NTKKQENEKHVMYVWFDALSFYMTSSGLGESL--SEMMYWPTDLQVIGKDISWFQSVILA 646 Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 S LPL +K+ +HGFI G K+SKSLGNV++ E+++EVGV++ RY+L++ Sbjct: 647 TMCFSMGLPLTRKILAHGFIQGSDGRKMSKSLGNVLNLDELLQEVGVESFRYYLLKSTVM 706 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 G D +D++ LK+ N+DLA+ +GNLV R S++ K +G++P+ + +S ++ Sbjct: 707 GSDVNFDQNQLKEMHNSDLADNVGNLVHRLTSLVTKYNEGVVPSYKSKVKSPFDLV---- 762 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 +++ +N+ ++ L +++ Y PW K N D+ +VL V +E + Sbjct: 763 EFMKDCSDNVLKLDVYNILILTNMKFKDLNNYLTVTSPWAEK--NQDKRDSVLRVLLECV 820 Query: 456 RQLAILLQAFVPKLANKIFDIL 477 LA L +P+ +F L Sbjct: 821 YFLAHFLYPVLPQSMEHLFSKL 842 >gi|119476462|ref|ZP_01616813.1| Methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] gi|119450326|gb|EAW31561.1| Methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] Length = 680 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 129/504 (25%), Positives = 223/504 (44%), Gaps = 37/504 (7%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ R+ R G D ++ D HG I A+ Sbjct: 12 KILVTSALPYANGPLHLGHLLETIQTDIWVRYQRQKGNDCIYVCADDAHGTAIMLTAEKN 71 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G++ + + D I +D++ T + ++ K+ G I Sbjct: 72 GISPEQQIANIQAAHEKDFDQFLIRFDNYHSTHSAENKRYSEEIYLKLKANGHIASREIM 131 Query: 126 GWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y + + D E G + + A ++P ++ + + + Sbjct: 132 QLYDPEKDLFLADRYIKGTCPKCKTEDQYGDNCEACGATYSPADLIDPKSAVSGATPIEK 191 Query: 175 KLLSYYESHPEF-----------ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 Y+ + P+F L E N++ ++++GL+D +SR + +G +IPD Sbjct: 192 VSTHYFFTLPDFEQFLRDWTTGDSLQKEISNKLGEWLEAGLQDWDISRDSPYFGFEIPDA 251 Query: 224 PQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPA 277 P YVW+DA Y+ + Y D + +W AD H IGKDI+ FH ++WPA Sbjct: 252 PGKYFYVWLDAPIGYMASFQNYCDRSGLNFDDYWGADSEAELYHFIGKDIINFHGLFWPA 311 Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337 L SA P +F+HGFI G+K+SKS G I +E + + LRY+ +++ Sbjct: 312 MLHSAGYRKPNAIFAHGFITVNGKKMSKSRGTFIMASTYLEHLDPEYLRYYYAAKLSASI 371 Query: 338 DGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395 D + + +RVN+DL + N+ SRS I K DG M PT ++++ Sbjct: 372 DDIDLNLEDFVQRVNSDLVGKVVNIASRSAKFITKGRDGVMSPTLANAELWQQAVIKG-- 429 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVE 453 +EI E + + +A+ ++++L + YFD Q+PW+L K V + + Sbjct: 430 ---EEISELYEQREYSKAIREIMALADTTNEYFDGQEPWKLAKEAGKEQLVVDVASLCIN 486 Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477 + R + I L+ +P A K L Sbjct: 487 LFRLIMIYLRPVLPITAEKASSFL 510 >gi|313886004|ref|ZP_07819742.1| methionine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I] gi|312924534|gb|EFR35305.1| methionine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I] Length = 683 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 141/519 (27%), Positives = 246/519 (47%), Gaps = 43/519 (8%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++TA+ Y N HIGH A + AD+ R+ R+ G +VLF G+DEHG IA A+ Sbjct: 7 KRTLVTTALPYANGPVHIGHLAGVYVPADIYVRYKRMKGDEVLFIGGSDEHGVPIAIKAK 66 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ + VD+ ++ L I +D + RTT + H T + K+ + G + + Sbjct: 67 AEGVSPQEVVDRYHALIKESFARLGIDFDIYSRTTSETHEKTASAFFTKLYESGKLIEQT 126 Query: 124 YSGWYSLRDEAYYND-----------DEVYKG----ADGQYYNAQ-----HNPV-----Q 158 +Y + + D +E G A G +A H+ + + Sbjct: 127 SEQYYDPEAKQFLADRYITGTCPHCHNERAYGDQCEACGTSLSATDLIDPHSAISGAKPE 186 Query: 159 WMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 E + ++ L Y+ L + E H E+ + + S++ GL+ +++R DWG Sbjct: 187 LRETKHWYLPLGDYESFLREWILEGHKEWKPNV--YGQCKSWLDLGLQPRAVTRD-LDWG 243 Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270 I +P ++YVW DA Y++ T L PD + W D +H IGKD + F Sbjct: 244 IPVPLQGAEGKVLYVWFDAPIGYISNTKEL-LPDSWRT--WWCDPETRLIHFIGKDNIVF 300 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327 H I +PA L + + LP V ++ F+ +G+KIS S I E ++E+ D LRY Sbjct: 301 HCIIFPAMLKAEGSFNLPDNVPANEFLNLEGDKISTSRNWAIWLHEYLDEMPGKEDVLRY 360 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L KD + + R N +L GN V+R++ + K +DG +P G+ TE D Sbjct: 361 VLTANAPETKDNDFTWRDYQARNNNELVAIYGNFVNRALVLTHKYFDGKVPPLGSLTEID 420 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 E +L + + + + +++ AL + L ++Y +PW++ K++PDR +T+ Sbjct: 421 EEMLREVAAIPAALDDQLEHFHFREALKTAMQLARIGNKYLADTEPWKVIKSDPDRVATI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 L++ ++++ L+I F P ++ +L V + F Sbjct: 481 LHLALQLVGNLSIAFAPFTPFSTRRLLAMLQVEEGGFAF 519 >gi|218960775|ref|YP_001740550.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) [Candidatus Cloacamonas acidaminovorans] gi|167729432|emb|CAO80343.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) [Candidatus Cloacamonas acidaminovorans] Length = 678 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 131/501 (26%), Positives = 237/501 (47%), Gaps = 43/501 (8%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K +++A+ Y N + HIGH A + AD+ R+ RL G DV++ GTDEHG I+ A Sbjct: 2 KYLVTSALPYANGKLHIGHLAGAYLPADIFVRYLRLKGEDVIYICGTDEHGTPISITADK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + V+ + + + + I +D+F T+ H+ + ++ +KG I Sbjct: 62 EGITPQEVVNYYHNSIKKAFEGIGIEFDNFSGTSRPPHYKLAADFFLQLYNKGYIKPKNT 121 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-------QYYNAQ-----------HNPVQ 158 +Y +D+ Y D V ++ A G Q Y PV Sbjct: 122 LQFYCEKDKRYLPDRYVEGICPLCGFEDARGDQCDKCGQIYETTTLIEPKCKICGSTPVI 181 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E + +F +L +++KL + + + + RN ++ + GL + S++R WG+ Sbjct: 182 -KETKHWFLQLEGFREKLKRWLATKDYWKENV--RNFILGLLDQGLVERSVTRD-LSWGV 237 Query: 219 KIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FW--PAD--LHVIGKDILR 269 +P + ++YVW DA Y++ T G K +W P +H IGKD + Sbjct: 238 PVPLPEAKGKVLYVWFDAPIGYISATVEWAEKIGQPEKWKEYWLNPETRLIHFIGKDNII 297 Query: 270 FHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 FH++ WP+ L+ + LP + ++ F+ +G+KIS S I E I++ + LRY Sbjct: 298 FHSLIWPSMLMGQDTIYCLPYDIPANEFMNLEGKKISTSKNWAIWVDEFIQDFDSEYLRY 357 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 +L +D + + ++N +L N +GNL +R + K+++G I T A +E+ Sbjct: 358 YLAVNAPERQDSDFSFKDFQNKINIELNNTLGNLANRVFAFANKNFEGKI-TACALSETA 416 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 ++ ++L+EI EN N + + ++ + +RYFD KPW K N D + Sbjct: 417 NKAIAEADKLLKEIEENYLNYQVKKNTRLIMDIARLGNRYFDENKPWAQLKENRDATNET 476 Query: 448 LYVTVEVIRQLAILLQAFVPK 468 LYV ++ ++++ +P+ Sbjct: 477 LYVCSNLLAKISVAFSPIMPR 497 >gi|304312862|ref|YP_003812460.1| Methionyl-tRNA synthetase [gamma proteobacterium HdN1] gi|301798595|emb|CBL46825.1| Methionyl-tRNA synthetase [gamma proteobacterium HdN1] Length = 707 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 138/510 (27%), Positives = 227/510 (44%), Gaps = 42/510 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + +++A+ Y N H+GH E I D+ RF ++ G + + D HG I A+ G Sbjct: 13 ILVTSALPYANGPIHLGHMLEYIQTDIWVRFQKMRGANCHYVCADDAHGTAIMLKAEQLG 72 Query: 67 VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 T + + Q + RD A L I +D++ T + +++ + DKG I + Sbjct: 73 RTPEEQIAQVKVEHERDFAGFL-IGFDNYYSTHSPENRHFSELIYARNRDKGYIVAREIT 131 Query: 126 GWYSLRDEAYYNDDEVYK-----GADGQY----------YNAQH--NPVQWME------- 161 + + + D V GAD QY Y AQ NP + Sbjct: 132 QLFDPEKQMFLADRFVKGTCPKCGADDQYGDNCEVCGATYPAQELKNPRSTISGATPVLK 191 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 FF L +Q L + S L N++ ++ +GL+ +SR+ +G +I Sbjct: 192 ANTQLFFDLPRFQAMLEKWIRSG---TLQEGIANKLEEWLSAGLQQWDISREAPYFGFEI 248 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHAI 273 PD P YVW+DA Y+ + L G +W D H IGKDI+ FH + Sbjct: 249 PDHPGKYFYVWLDAPIGYMASFKNLCERRGDLDFDHYWRKDSTAELYHFIGKDIISFHGL 308 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L A+ P + SHGF+ G+K+SKS G I + + + LRY+ ++ Sbjct: 309 FWPALLTGADFRTPTAICSHGFVTVNGQKMSKSRGTFIKAETYLRHLTPEYLRYYFAAKL 368 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + + +RVNADL N + NL SR I K +G + + S+L Sbjct: 369 GSRIDDIDLNLEDFVQRVNADLVNKVINLASRCAGFIQKKSNGRLSAAPLRDDVAYSLLQ 428 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY--- 449 EI E+ + + +A+ +++L ++Y D QKPW L K +P + + V+ Sbjct: 429 DFMEAGTEIGEHYEQREFSKAIRNIMALADRANQYIDEQKPWALAK-DPQQDTQVVQICS 487 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFV 479 V + + R L I L+ +P+L+ ++ L + Sbjct: 488 VGLNLFRLLMIYLKPVLPQLSVEVEAFLAI 517 >gi|332176500|gb|AEE12190.1| Methionyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707] Length = 683 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 141/519 (27%), Positives = 246/519 (47%), Gaps = 43/519 (8%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++TA+ Y N HIGH A + AD+ R+ R+ G +VLF G+DEHG IA A+ Sbjct: 7 KRTLVTTALPYANGPVHIGHLAGVYVPADIYVRYKRMKGDEVLFIGGSDEHGVPIAIKAK 66 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ + VD+ ++ L I +D + RTT + H T + K+ + G + + Sbjct: 67 AEGVSPQEVVDRYHALIKESFARLGIDFDIYSRTTSETHEKTATAFFTKLYESGKLIEQT 126 Query: 124 YSGWYSLRDEAYYND-----------DEVYKG----ADGQYYNAQ-----HNPV-----Q 158 +Y + + D +E G A G +A H+ + + Sbjct: 127 SEQYYDPEAKQFLADRYITGTCPHCHNERAYGDQCEACGTSLSATDLIDPHSAISGAKPE 186 Query: 159 WMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 E + ++ L Y+ L + E H E+ + + S++ GL+ +++R DWG Sbjct: 187 LRETKHWYLPLGDYESFLREWILEGHKEWKPNV--YGQCKSWLDLGLQPRAVTRD-LDWG 243 Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270 I +P ++YVW DA Y++ T L PD + W D +H IGKD + F Sbjct: 244 IPVPLQGAEGKVLYVWFDAPIGYISNTKEL-LPDSWRT--WWCDPETRLIHFIGKDNIVF 300 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327 H I +PA L + + LP V ++ F+ +G+KIS S I E ++E+ D LRY Sbjct: 301 HCIIFPAMLKAEGSFNLPDNVPANEFLNLEGDKISTSRNWAIWLHEYLDEMPGKEDVLRY 360 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L KD + + R N +L GN V+R++ + K +DG +P G+ TE D Sbjct: 361 VLTANAPETKDNDFTWRDYQARNNNELVAIYGNFVNRALVLTHKYFDGKVPPLGSLTEID 420 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 E +L + + + + +++ AL + L ++Y +PW++ K++PDR +T+ Sbjct: 421 EEMLREVAAIPAALDDQLEHFHFREALKTAMQLARIGNKYLADTEPWKVIKSDPDRVATI 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 L++ ++++ L+I F P ++ +L V + F Sbjct: 481 LHLALQLVGNLSIAFAPFTPFSTRRLLAMLQVEEGGFAF 519 >gi|104780428|ref|YP_606926.1| methionyl-tRNA synthetase [Pseudomonas entomophila L48] gi|122985938|sp|Q1IDZ3|SYM_PSEE4 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|95109415|emb|CAK14115.1| methionyl-tRNA synthetase [Pseudomonas entomophila L48] Length = 679 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 131/521 (25%), Positives = 234/521 (44%), Gaps = 54/521 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E ++ +++A+ Y N H+GH E I D+ RF +L G ++ D HG I Sbjct: 1 MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCVYVCADDAHGSAIML 60 Query: 61 AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D AD L + +D+F T + + + +++ ++ D G I Sbjct: 61 RAEKEGITPEQLIANVQAEHSSDFADFL-VDFDNFHSTHSEENRELSGLIYTRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQW-------- 159 + ++ ++ + D KG A+ QY A + P + Sbjct: 120 ATRSVTQYFD-PEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAIS 178 Query: 160 ------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + + +FF+L +Q L + S L N++ ++ SGL++ +SR Sbjct: 179 GATPVLRDSQHFFFKLPDFQAMLQQWTRSG---TLQDAVANKLAEWLDSGLQEWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN-----------PDGSKAKFWPADLHV 262 +G +IP +P YVW+DA Y+ + L +GSKA+ + H Sbjct: 236 PYFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWSEGSKAELY----HF 291 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 IGKDI+ FHA++WPA L + P V HG++ G K+SKS G I ++ + Sbjct: 292 IGKDIVNFHALFWPAMLEGSGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQP 351 Query: 323 DALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + LRY+ ++ G D + + ++VN+DL + N+ SR I K DG++ Sbjct: 352 EYLRYYYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNDGVMVAGD 411 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439 A + E+ L+ I E +++ RA+ ++++L + + + PW L K Sbjct: 412 AAPDLTEAFLAAAP----SIAEAYESRDFGRAMREIMALADRANAWIADKAPWSLAKQEG 467 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 + + + + RQL I L+ +P LA L VA Sbjct: 468 KQEEVQAICAQGINLFRQLVIFLKPVLPLLAADAEAFLNVA 508 >gi|309973006|gb|ADO96207.1| Methionyl-tRNA synthetase [Haemophilus influenzae R2846] Length = 682 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 134/503 (26%), Positives = 236/503 (46%), Gaps = 45/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G + F D HG I A Sbjct: 7 KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + RD A +IS+D++ T + + ++ K+ G I Sbjct: 67 GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A++ L + S L E N++ + +SGL+ +SR +G Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW----PADL-HVIGKDILRFHA 272 +IP YVW+DA Y+ + L +G +FW A+L H IGKDI+ FH+ Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWVEGSDAELYHFIGKDIVYFHS 301 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF+HG++ G K+SKS G I + + + LRY+ + Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361 Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + +D ++ + +RVN D+ N + NL SR+ I K ++G + A DES+ Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDESLF 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + ++I +++ ++A+ ++++L + ++Y D + PW + K A V Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKSPWVIAKEEGKEAELQAVCS 477 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + +E+ L L+ +PKLA + Sbjct: 478 MGIELFHVLMSYLKPVLPKLAER 500 >gi|255020628|ref|ZP_05292690.1| Methionyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] gi|254969864|gb|EET27364.1| Methionyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] Length = 680 Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 138/511 (27%), Positives = 224/511 (43%), Gaps = 46/511 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E D+ R+H+L G D ++ D HG I AQ Sbjct: 2 KRKILVTSALPYANGPLHLGHLVEYTQTDIWVRYHKLRGHDCVYVCADDAHGTPIMLRAQ 61 Query: 64 NAGVTTKVFVDQNSR-NFRDMADVLDISYDDFIRTTE-----------KRHHDTCRILWK 111 + G++ + V++ + + RD I +D + T +R I+ + Sbjct: 62 SEGISPETLVERMQKEHLRDFT-AFGIGFDCYHSTHSPENFTISQDIYRRLRAAEHIVVR 120 Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE--------- 162 +I D G + +R G + + A ++P ++ Sbjct: 121 EIEQAFDPVAGIFLPDRFIRGTCPKCGAADQYGDNCEVCGATYSPTDLVDAVSAVSGATP 180 Query: 163 -----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 E YFF LS + D L + S L E N++ + K+GL D +SR +G Sbjct: 181 VRRPTEHYFFTLSDFADFLQEWIHSG---TLQEEMANKLDEWFKAGLADWDISRDAPYFG 237 Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADL-----HVIGKDILRFH 271 I IPD YVW+DAL Y+ T + G +W A H IGKDI+ FH Sbjct: 238 IPIPDTEGKFFYVWLDALPGYMAATTHWCEEHGRDFDTYWGAQAQSEVYHFIGKDIIYFH 297 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 A++WPA L A LP +F+HGF+ G K+SKS G I +E + + LRY+ Sbjct: 298 ALFWPAMLKGAGYRLPTAIFTHGFMTVNGAKMSKSRGTSITAARYLERLEPEFLRYYFAS 357 Query: 332 EI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDES 389 ++ +D + + + N DL + NL +RS I + G + P+ G D + Sbjct: 358 KLNPRPEDIDLNLEDFLLKGNGDLVGKVVNLAARSAGFIHQFGGGRLAPSLG----EDAT 413 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 + + + I + RA+ ++++ V+ Y D PW+L K +P + +L Sbjct: 414 FYAELAGQRERIGAAYAERDYARAIRDIMAMADRVNAYVDRHAPWQLAK-DPAQREVLLR 472 Query: 450 V---TVEVIRQLAILLQAFVPKLANKIFDIL 477 V T+ R L LL VP+LA + D L Sbjct: 473 VATTTLNAFRLLITLLSPVVPQLARRSLDFL 503 >gi|88801601|ref|ZP_01117129.1| methionyl-tRNA synthetase [Polaribacter irgensii 23-P] gi|88782259|gb|EAR13436.1| methionyl-tRNA synthetase [Polaribacter irgensii 23-P] Length = 684 Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 136/517 (26%), Positives = 239/517 (46%), Gaps = 41/517 (7%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M ++ I+ A+ Y N HIGH A + AD+ AR+ RL G DV + G+DEHG I Sbjct: 1 MSAPKRYTITAALPYTNGPIHIGHLAGVYVPADIYARYLRLIGKDVAYICGSDEHGVAIP 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ GV+ + +D+ + IS+D++ RT+ + HH T + K+ + GD Sbjct: 61 MRAKKEGVSPQHIIDKYHGIIKQSFLDFGISFDNYSRTSNELHHKTASEFFTKLHNNGDF 120 Query: 120 YKGCYSGWYSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWMEEEG--- 164 + + Y + D +E Y G + HN + + Sbjct: 121 IEETSAQLYDAEANQFLADRFVVGTCPKCNFEESY-GDQCESCGTSHNATDLINPKSAIT 179 Query: 165 -----------YFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212 +F L ++D L + E H + P +V S+++ GL+ +++R Sbjct: 180 GNVPTVKKTKHWFLPLDKHEDFLREWILEGHKKDWKP-NVYGQVKSWIEDGLRPRAVTRD 238 Query: 213 TFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGK 265 DWGI +P + ++YVW DA Y+++T +G + +W D +H IGK Sbjct: 239 -LDWGIPVPLKEADGKVLYVWFDAPIGYISSTKEWAAREGKNWEDYWKRDDTKLVHFIGK 297 Query: 266 DILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GV 322 D + FH I +P+ L + + LP V ++ F+ +G K+S S + E + E Sbjct: 298 DNIVFHCIIFPSMLKAHGDYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLAEFPNQQ 357 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D LRY L KD + + + N +L GN ++R V + K Y G++P P Sbjct: 358 DVLRYTLTANAPENKDNDFTWKDFQAKNNNELVAIFGNFINRVVVLTNKYYGGVVPAPND 417 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 F++ DE L+ I ++++ A ++++L ++Y ++PW++ K + Sbjct: 418 FSDIDEDTLAAVKEFPNTIGKSIERYRFREASQELMNLARLGNKYLADEEPWKVIKLDEK 477 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 R T+LYV +++ LA++ + F+P A K+ IL + Sbjct: 478 RVQTILYVALQISAALAVVSEPFLPFTAKKLKGILNI 514 >gi|262191524|ref|ZP_06049707.1| methionyl-tRNA synthetase [Vibrio cholerae CT 5369-93] gi|262032578|gb|EEY51133.1| methionyl-tRNA synthetase [Vibrio cholerae CT 5369-93] Length = 683 Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 138/504 (27%), Positives = 226/504 (44%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ S RD A DIS+D++ T + + ++ ++ G I Sbjct: 67 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160 S + E + D V KG A G+ Y+ NP + Sbjct: 126 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + + GL+ +SR +G Sbjct: 185 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + G ++W D H IGKDI+ FH Sbjct: 242 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G + + + + LRY+ Sbjct: 302 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVNAD+ N I NL SR+ I K +DG + F E + + Sbjct: 362 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKL--SAHFAEPE--L 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVL 448 + S I E + + RA+ ++ +L + ++Y D + PW + K+ D+A + Sbjct: 418 YAEFSGAADRIAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P LA + Sbjct: 478 TVGINLFRVLMTYLKPVMPALAER 501 >gi|262171953|ref|ZP_06039631.1| methionyl-tRNA synthetase [Vibrio mimicus MB-451] gi|261893029|gb|EEY39015.1| methionyl-tRNA synthetase [Vibrio mimicus MB-451] Length = 683 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 138/504 (27%), Positives = 223/504 (44%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ S RD A DIS+D++ T + + ++ ++ G I Sbjct: 67 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160 S + E + D V KG A G+ Y+ NP + Sbjct: 126 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + + GL+ +SR +G Sbjct: 185 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + G ++W D H IGKDI+ FH Sbjct: 242 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFDEYWNKDSKTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G + + + + LRY+ Sbjct: 302 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVNAD+ N I NL SR+ I K +DG + A E Sbjct: 362 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAQIAEPELYAEF 421 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVL 448 R I E + + RA+ ++ +L + ++Y D + PW + K+ D+A + Sbjct: 422 AGAADR----IAELFETREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P LA + Sbjct: 478 TVGINLFRVLVTYLKPVMPALAER 501 >gi|161582014|ref|NP_230681.2| methionyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|255745456|ref|ZP_05419404.1| methionyl-tRNA synthetase [Vibrio cholera CIRS 101] gi|262151292|ref|ZP_06028427.1| methionyl-tRNA synthetase [Vibrio cholerae INDRE 91/1] gi|25009403|sp|Q9KT69|SYM_VIBCH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|255736531|gb|EET91928.1| methionyl-tRNA synthetase [Vibrio cholera CIRS 101] gi|262030908|gb|EEY49537.1| methionyl-tRNA synthetase [Vibrio cholerae INDRE 91/1] Length = 683 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 139/506 (27%), Positives = 224/506 (44%), Gaps = 50/506 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ S RD A DIS+D++ T + + ++ ++ G I Sbjct: 67 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160 S + E + D V KG A G+ Y+ NP + Sbjct: 126 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + + GL+ +SR +G Sbjct: 185 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + G ++W D H IGKDI+ FH Sbjct: 242 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G + + + + LRY+ Sbjct: 302 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVNAD+ N I NL SR+ I K +DG + A E Sbjct: 362 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 421 Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446 R+ + E RE RA+ ++ +L + ++Y D + PW + K+ D+A Sbjct: 422 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 475 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472 + V + + R L L+ +P LA + Sbjct: 476 ICTVGINLFRVLMTYLKPVMPALAER 501 >gi|327483748|gb|AEA78155.1| Methionyl-tRNA synthetase [Vibrio cholerae LMA3894-4] Length = 683 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 138/504 (27%), Positives = 223/504 (44%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ S RD A DIS+D++ T + + ++ ++ G I Sbjct: 67 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160 S + E + D V KG A G+ Y+ NP + Sbjct: 126 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + + GL+ +SR +G Sbjct: 185 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + G ++W D H IGKDI+ FH Sbjct: 242 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G + + + + LRY+ Sbjct: 302 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVNAD+ N I NL SR+ I K +DG + A E Sbjct: 362 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 421 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVL 448 R I E + + RA+ ++ +L + ++Y D + PW + K+ D+A + Sbjct: 422 AGAADR----IAELFETREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P LA + Sbjct: 478 TVGINLFRVLMTYLKPVMPALAER 501 >gi|330502374|ref|YP_004379243.1| methionyl-tRNA synthetase [Pseudomonas mendocina NK-01] gi|328916660|gb|AEB57491.1| methionyl-tRNA synthetase [Pseudomonas mendocina NK-01] Length = 683 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 124/507 (24%), Positives = 224/507 (44%), Gaps = 44/507 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E + D+ R+ +L G ++ D HG I Sbjct: 6 MTEARKILVTSALPYANGSIHLGHMLEYVQTDMWVRYQKLRGNQAIYVCADDAHGSAIML 65 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +D + + D AD + +D++ T + + + ++ + DKG I Sbjct: 66 RAEKEGITPEQLIDGVRAEHMADFAD-FGVDFDNYHSTHSEENRELSASIYLALRDKGHI 124 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWM-------- 160 + ++ + D + G + QY A ++P + Sbjct: 125 ATRAVTQYFDPEKGMFLADRFIKGTCPKCGTEDQYGDNCEKCGATYSPTELKNPRSAISG 184 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + +FF+L ++ L + S L N++ ++ GL++ +SR Sbjct: 185 AVPVLKESQHFFFKLPDFEAMLKQWTRSG---ALQEAVANKIAEWLDGGLQEWDISRDAP 241 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267 +G +IP +P YVW+DA Y+ + L P+ FW D H IGKDI Sbjct: 242 YFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCRKRPELDFDAFWGKDSSAELYHFIGKDI 301 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L A P V HG++ G+K+SKS G I ++ + + LRY Sbjct: 302 VNFHALFWPAMLEGAGYRKPTAVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLRY 361 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ G D + + ++VN+DL + N+ SR I K G++ Sbjct: 362 YYASKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGLL----VAANP 417 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 + + I E + + RA+ ++++L + + + PW L K +A Sbjct: 418 EPELWDAFQAAAPSIAEAYEARDFSRAMREIMALADRANAWIADKAPWALNKVEGKQAEV 477 Query: 447 --VLYVTVEVIRQLAILLQAFVPKLAN 471 + + V + RQL I+L+ +PKLA+ Sbjct: 478 QEICALGVNLFRQLVIMLKPVLPKLAS 504 >gi|239501264|ref|ZP_04660574.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB900] Length = 687 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 143/543 (26%), Positives = 241/543 (44%), Gaps = 63/543 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I AD+ R R G DV + D HG I A+ Sbjct: 3 KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62 Query: 66 GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + + + RD D + +D + T + ++ K + G+I Sbjct: 63 GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161 + + ++ + D KG ++ QY YNA NP + Sbjct: 122 TQLFD-PEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPV 180 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + YFF+L + + L + + E LP+ N++ + ++GL D +SR +G Sbjct: 181 EKSSDHYFFKLPNFAEYLQKW--TRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGF 238 Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDILRF 270 +IPD P YVW+DA Y+++ Y+ PD + FW D H IGKDI+ F Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDIVYF 298 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 HA++WPA L AN P +F +GF+ G+K+SKS G I ++ + + LRY+ Sbjct: 299 HALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ +D + D ++VN+DL + N+ SR I ++ + + A ++ +S Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSSTCAESDLVQS 418 Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446 + + E RE A+ ++++L ++Y D +KPW L K Sbjct: 419 FIDAGDSIAAAYEARE------FSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVL 472 Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQR 492 V V + + RQLA+ L +P LA ++ D L V+ E FQ L QR Sbjct: 473 DVCSVGINLFRQLAVYLAPVLPTLAQQVQDFLKLESFDFESRKQILVSHEIAQFQPLMQR 532 Query: 493 LKP 495 + P Sbjct: 533 VDP 535 >gi|118602577|ref|YP_903792.1| methionyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|187647764|sp|A1AWL4|SYM_RUTMC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|118567516|gb|ABL02321.1| methionyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 550 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 133/539 (24%), Positives = 242/539 (44%), Gaps = 49/539 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N + H+GH E I AD+ RF ++ G + + D HG I + Sbjct: 5 KILVTSALPYANGEIHLGHLLEYIQADIWVRFQKMMGNECYYVCADDTHGTPIMLKSDEL 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + I + + T + + D ++ K++D G I S Sbjct: 65 GITPETLIKGVSERHQADFKEFSIGFSKYHSTHSQENKDISANIYHKLNDAGFIKTRIIS 124 Query: 126 GWYSLRDEAYYND-----DEVYKGADGQY------YNAQHNPVQWM-------------- 160 + + + D D GA+ QY ++P + Sbjct: 125 QAFDPEKQMFLPDRFIKGDCPKCGANDQYGDNCEICGVTYSPTELKNAKSIISDATPIAK 184 Query: 161 EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + E YFF L ++ +L ++ E H L E N++ + + GL+ +SR +G + Sbjct: 185 DSEHYFFDLPQFETQLKAWIKEGH----LQDEVSNKLSEWFEQGLQQWDISRDAPYFGFQ 240 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAI 273 IPD YVW+DA Y+ + L + G +++ D H IGKDI+ FHA+ Sbjct: 241 IPDVEGKYFYVWLDAPIGYMASFKKLCDEQGLDFDEYFNKDSNTELYHFIGKDIVYFHAL 300 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L+ +N P +F HGF+ G+K+SKS G I + + + LRY+ ++ Sbjct: 301 FWPAILMGSNYRTPSAIFVHGFLTVNGQKMSKSRGTFIQARTYLNHLNPECLRYYYAYKL 360 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 + D + K+RVN+DL + N+ SRS ++K ++ + E ++ Sbjct: 361 SAKIDDIDLNLTDFKQRVNSDLVGKVVNIASRSTGFLVKKFNKTLSDYAIDPELYHEFVA 420 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 C + I+++ + + ++A+ +++ L + ++Y D KPW+L K + + V + + Sbjct: 421 -CGDI---IKKHYEARNYNQAMREIMKLADKANQYIDEHKPWQLVKKDTKQVHDVTSLAI 476 Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--TFDPIFPR 509 + R L L+ +P +A + L + N Q LK H+ TF P+ R Sbjct: 477 NLFRVLMTYLKPVLPVMAKQAEMFLNIDAFNW------QDLKRPLTKHQINTFKPLMSR 529 >gi|83644722|ref|YP_433157.1| methionyl-tRNA synthetase [Hahella chejuensis KCTC 2396] gi|123739980|sp|Q2SKU2|SYM_HAHCH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|83632765|gb|ABC28732.1| Methionyl-tRNA synthetase [Hahella chejuensis KCTC 2396] Length = 681 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 134/505 (26%), Positives = 226/505 (44%), Gaps = 47/505 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E K+ +++A+ Y N H+GH E I D+ RF +L G + D HG I A Sbjct: 4 EPRKILVTSALPYANGPIHLGHLLEYIQTDIWVRFQKLRGHQCTYVCADDAHGTAIMLKA 63 Query: 63 QNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + G+T + +DQ N+ + RD A+ L I +D++ T + + + ++K D G I Sbjct: 64 EQMGITPEQLIDQVNADHRRDFAEFL-IEFDNYYSTHSEENRELSSYIYKACLDAGKIAT 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM--------- 160 + Y ++ + D KG A+ QY ++ + P + + Sbjct: 123 RTITQAYD-PEKNLFLADRFIKGTCPKCKAEDQYGDNCEVCSSTYTPAELINPRSAISGA 181 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 E +FF+L +Q+ L + S L + N++ ++ +GL++ +SR Sbjct: 182 TPIEKESTHFFFKLPDFQEFLQKWTRSG---TLQPQIANKLAEWLDAGLQEWDISRDAPY 238 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDIL 268 +G +IPD P YVW+DA Y+ + L D ++W D H IGKDI+ Sbjct: 239 FGFEIPDQPGKFFYVWLDAPIGYMASFKNLCARRADLDFDEYWKKDSTAELYHFIGKDII 298 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FHA++WP+ L A+ P V++HGF+ G K+SKS G I +E + + LRY+ Sbjct: 299 NFHALFWPSMLSCADFRTPSAVYAHGFVTVDGAKMSKSRGTFIMARTYLEHLNPEYLRYY 358 Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ D + +VNADL + N+ SR I K + P E Sbjct: 359 FAAKLTSNVDDLDLNLQDFTLKVNADLVGKLVNIASRCAKFITKAGGKLSPQISE-PELI 417 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446 E LS + Q +++ +A+ ++++L ++Y D + PW+L K Sbjct: 418 EQFLSKSDFIAQA----YEDREFGKAVREIMALADLANKYIDEKAPWKLAKEEGKEQEVL 473 Query: 447 -VLYVTVEVIRQLAILLQAFVPKLA 470 V V V + R L L +P +A Sbjct: 474 DVCSVGVNLFRILITYLAPVLPGVA 498 >gi|253996891|ref|YP_003048955.1| methionyl-tRNA synthetase [Methylotenera mobilis JLW8] gi|253983570|gb|ACT48428.1| methionyl-tRNA synthetase [Methylotenera mobilis JLW8] Length = 690 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 137/512 (26%), Positives = 234/512 (45%), Gaps = 47/512 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ RFH++ G V + D HG I A+ Sbjct: 9 KILVTSALPYANGSIHLGHLVEYIQTDIWVRFHKMQGHHVHYVCADDTHGTPIMLRAEKQ 68 Query: 66 GVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + D ++ L + +D++ T + + + ++KK+ G I Sbjct: 69 GITPEALIANVHKEHAADFSEFL-VQFDNYYSTNAPENKELSQSIYKKLKAAGKISTKTI 127 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160 +Y + D KG A QY A +NP + + Sbjct: 128 EQFYDPVKNMFL-PDRFIKGECPKCHAKDQYGDSCEVCGATYNPTELINAYSAVSGATPV 186 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E YFF+LS + L + S L E N++ + ++GL D +SR +G Sbjct: 187 RKETEHYFFKLSECEQFLRDWTRSG---TLQGEAANKMGEWFENGLNDWDISRDAPYFGF 243 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHA 272 +IPD P YVW+DA Y+ + L G ++W D H IGKDIL FHA Sbjct: 244 EIPDAPGKYFYVWLDAPIGYMASFKKLCETIGLDFDEYWQKDSKTELYHFIGKDILYFHA 303 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV-DALRYFLVR 331 ++WPA L + P ++F+HGF+ GEK+SKS G I +E + + LRY+ Sbjct: 304 LFWPATLEYSEHRKPTQIFAHGFLTVNGEKMSKSRGTFITARSYLEHIKTPEYLRYYYAA 363 Query: 332 EI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ + +D + + RVN+DL N+ SR+ I K ++G + P A + + Sbjct: 364 KLNSTMEDIDLNLEDFVARVNSDLVGKYINIASRTAGFINKRFEGKL-NPSA----NNPV 418 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448 ++ + E+ + +AL +++ L + + + PW + K A+ V Sbjct: 419 IAEIKASAATLAESYSEREYSKALREIMRLADVANGFVAEKAPWVMAKQEGQDAALQQVC 478 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +E+ R L + L+ +PKLA +I L +A Sbjct: 479 SDALEMFRLLTLYLKPVLPKLAGEIEQFLNIA 510 >gi|193076558|gb|ABO11218.2| methionyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978] Length = 687 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 143/543 (26%), Positives = 241/543 (44%), Gaps = 63/543 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I AD+ R R G DV + D HG I A+ Sbjct: 3 KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62 Query: 66 GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + + + RD D + +D + T + ++ K + G+I Sbjct: 63 GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161 + + ++ + D KG ++ QY YNA NP + Sbjct: 122 TQLFD-PEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPV 180 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + YFF+L + + L + + E LP+ N++ + ++GL D +SR +G Sbjct: 181 EKSSDHYFFKLPNFAEYLQKW--TRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGF 238 Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDILRF 270 +IPD P YVW+DA Y+++ Y+ PD + FW D H IGKDI+ F Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDIVYF 298 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 HA++WPA L AN P +F +GF+ G+K+SKS G I ++ + + LRY+ Sbjct: 299 HALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ +D + D ++VN+DL + N+ SR I ++ + + A ++ +S Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSSTCAESDLVQS 418 Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446 + + E RE A+ ++++L ++Y D +KPW L K Sbjct: 419 FIDAGDSIAAAYEARE------FSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVL 472 Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQR 492 V V + + RQLA+ L +P LA ++ D L V+ E FQ L QR Sbjct: 473 DVCSVGINLFRQLAVYLAPVLPTLAQQVQDFLKLESFDFESRKQILVSHEIAQFQPLMQR 532 Query: 493 LKP 495 + P Sbjct: 533 VDP 535 >gi|262402619|ref|ZP_06079180.1| methionyl-tRNA synthetase [Vibrio sp. RC586] gi|262351401|gb|EEZ00534.1| methionyl-tRNA synthetase [Vibrio sp. RC586] Length = 683 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 139/506 (27%), Positives = 224/506 (44%), Gaps = 50/506 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ S RD A DIS+D++ T + + ++ ++ G I Sbjct: 67 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160 S + E + D V KG A G+ Y+ NP + Sbjct: 126 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + + GL+ +SR +G Sbjct: 185 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + G ++W D H IGKDI+ FH Sbjct: 242 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFDEYWNKDSKTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G + + + + LRY+ Sbjct: 302 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVNAD+ N I NL SR+ I K +DG + A E Sbjct: 362 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAQFAEPELYAEF 421 Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446 R+ + E RE RA+ ++ +L + ++Y D + PW + K+ D+A Sbjct: 422 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 475 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472 + V + + R L L+ +P LA + Sbjct: 476 ICTVGINLFRVLMTYLKPVMPALAER 501 >gi|254468593|ref|ZP_05081999.1| methionyl-tRNA synthetase [beta proteobacterium KB13] gi|207087403|gb|EDZ64686.1| methionyl-tRNA synthetase [beta proteobacterium KB13] Length = 675 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 145/527 (27%), Positives = 241/527 (45%), Gaps = 46/527 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ I++A+ Y N H+GH E I D+ +R+ +++G +V + D HG I AQN Sbjct: 3 RILITSALPYANGSIHLGHLVEYIQTDIWSRYQKMNGHEVFYVCADDTHGTPIMIKAQNE 62 Query: 66 GVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T K + + + + +D AD +++D+F T K + ++K + I Sbjct: 63 GITPKQLIANVHKEHAQDFADFY-VNFDNFYTTDSKENQLYSEEIFKSLDRNKKISTKEI 121 Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160 ++ D+ + D KG A G Y+ NP + Sbjct: 122 EQYFD-EDKQMFLPDRFIKGECPKCNVKDQYGDSCEACGATYSPTDLVNPYSALSGTTPI 180 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + + +FF LS + L + S L E N++ + KSGL+D ++R +G Sbjct: 181 KKKTKHFFFNLSECEQFLKDWTTSG---TLQFEAENKIQEWFKSGLQDWDITRDKPYFGF 237 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271 IP + YVW+DA Y+ + L + G+ FW D H IGKDIL FH Sbjct: 238 LIPGETDKYFYVWLDAPIGYMASFKNLIDQKGNINFDDFWSPDSSTELYHFIGKDILYFH 297 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV-DALRYFLV 330 A++WPA L A P K+F+HGF+ GEK+SKS G I + + + LRY+ Sbjct: 298 ALFWPATLNFAGFRKPTKIFAHGFLTVNGEKMSKSRGTFITARSFLNNINEPEFLRYYFA 357 Query: 331 REIA-CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDE 388 ++ D + D L +VN+DL + N+ SR+ I K ++G I + ++S Sbjct: 358 SKLNDSMSDIDLNLDDLMSKVNSDLVGKLVNIPSRTFGFIHKLFNGKIKSIDQLASDSKY 417 Query: 389 SILSVCSRVLQ-EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRA 444 S L + S L+ EI + +++L + + +V +LV EV+ ++PW L K N + Sbjct: 418 SQLVIKSIDLKSEILDLYESRLYSQLVRKVFTLVEEVNELISDEQPWSLAKDLEQNKVQL 477 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491 +L + V R I L +P L+ ++ + D N Q D Sbjct: 478 HNILTTSAIVFRNSIIYLSPILPNLSKEVASLFNETDFNSFNQIKDN 524 >gi|229193317|ref|ZP_04320267.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876] gi|228590118|gb|EEK47987.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876] Length = 544 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 128/511 (25%), Positives = 236/511 (46%), Gaps = 41/511 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K D+ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y + D E +G +A +P+ +E++ + ++ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182 Query: 177 LSYYESHPEFILPIERRNEVIS---------------FVKSGLKDLSLSRKTFDWGIKIP 221 +Y + F I+R E+ +VK GL D ++SR G+ IP Sbjct: 183 EHFYFALHTFQQQIKRTVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241 Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFHAI 273 +D + +YVWI+A+T Y + + + G +FW ++ +V GKD + FH++ Sbjct: 242 VEGYEDKK--IYVWIEAVTGYYSASKHWVEETGKDDQEFWDSEAKTYYVHGKDNIPFHSV 299 Query: 274 YWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 300 IWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVN 359 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 +D + N++L GN V+R++ I K Y G++P E + + Sbjct: 360 APENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDKV-- 417 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + +++ E ++ AL V V ++YFD ++PW+ ++ +P +Y V Sbjct: 418 --EGLYKQVGEAIEQTKFKVALETVFDTVRFANKYFDEKQPWKQREDDPVSCEETIYNCV 475 Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +I A LL+ F+P + ++ + L + N Sbjct: 476 YLIANFAHLLEPFLPFSSERVRNTLSIVKRN 506 >gi|118480122|ref|YP_897273.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|196047520|ref|ZP_03114730.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB108] gi|225867021|ref|YP_002752399.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB102] gi|187645699|sp|A0RKM3|SYM1_BACAH RecName: Full=Methionyl-tRNA synthetase 1; AltName: Full=Methionine--tRNA ligase 1; Short=MetRS 1 gi|254782850|sp|C1EYD5|SYM_BACC3 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|118419347|gb|ABK87766.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|196021634|gb|EDX60331.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB108] gi|225787890|gb|ACO28107.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB102] Length = 544 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 136/540 (25%), Positives = 246/540 (45%), Gaps = 54/540 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL---HVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G + FW ++ +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDREFWDSEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + I Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 R+ + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V +I A LL+ F+P + +I + L + + N +P L D + P F Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPTRIDSVKPLF 524 >gi|24216617|ref|NP_714098.1| methionyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] gi|68566008|sp|Q8EZD6|SYM_LEPIN RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|24197948|gb|AAN51116.1| methionyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] Length = 715 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 144/558 (25%), Positives = 251/558 (44%), Gaps = 84/558 (15%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + +++A+ Y N H+GH E I D+ RF + G + F D HG + AA+ G Sbjct: 10 ILVTSALPYANGPIHLGHVLEGIQTDIWVRFQKAIGNECYFFCADDTHGTPVMLAARKEG 69 Query: 67 VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 +T + +++ ++RD+ I YD + T K + + + ++ K+ KG I + Sbjct: 70 ITPEQLIERVGQEHYRDLTS-FGIEYDHYDSTHSKANQEISKDIYLKLKSKGHISRRSIE 128 Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEE------------ 162 Y D+ + D + G + + A ++P ++ Sbjct: 129 QSYCETDKMFLPDRFIKGTCPNCKSKDQYGDNCEVCGATYSPKDLIDSHCSLCGTSPVVK 188 Query: 163 --EGYFFRLSAYQDK--------------------LLSYYESHPEFILPIERRNEVISFV 200 + FF+L + K L S+ E+ + ++ + Sbjct: 189 NSDHIFFKLGDFHKKDEKSTSLETINPSHLKTDFDLQSWIETSGVVSESEGVKKKLKEWF 248 Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT------GYLDNPDGSKAK 254 +GL+D +SR +G +IPD+ YVW+DA Y+ ++ + + P+ + Sbjct: 249 DAGLQDWDISRDGPYFGFEIPDETNKYFYVWLDAPIGYMASSKNFFEKNFPNEPNKFDS- 307 Query: 255 FWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310 FW +H IGKDIL FH ++WPA L ++ P KV HGFI GEK+SKS G Sbjct: 308 FWKNKNSEIVHFIGKDILYFHTLFWPAMLEGSDYRAPSKVHVHGFIGVNGEKMSKSRGTF 367 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKD----GFYDKDGLKKRVNADLANGIGNLVSRSV 366 I ++ + + LR++L ++ G D F D +VN+DL + N VSR Sbjct: 368 IKAETFVKYLDPEHLRFYLASKLGPGMDDIDLSFED---FINKVNSDLVGNLINSVSRVS 424 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR-----ENMQNQLIH--------RA 413 + IL D + T G S E + + + Q ++ +++QN + + + Sbjct: 425 TTIL---DALDRTLGVV--SKEGLALIEEILYQTVKFGPGEDSIQNIIKYAYDQRNYAKV 479 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 L ++ L V+RY + PW+L K NP++A V+ VT+ R LAI L VPK++ +I Sbjct: 480 LREITRLGDRVNRYVNDNAPWKLIKENPEKAREVVTVTLNASRFLAIYLYPVVPKISEQI 539 Query: 474 FDILFVADENRCFQSLDQ 491 + +L + D + F+ LD+ Sbjct: 540 YKLLNLQD-SPSFKDLDK 556 >gi|261253533|ref|ZP_05946106.1| methionyl-tRNA synthetase [Vibrio orientalis CIP 102891] gi|260936924|gb|EEX92913.1| methionyl-tRNA synthetase [Vibrio orientalis CIP 102891] Length = 686 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 133/503 (26%), Positives = 221/503 (43%), Gaps = 44/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + + ++ ++ G I S Sbjct: 67 GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWME------------ 161 + E + D V KG ++ QY + N P + ++ Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVM 185 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E +FF L ++ L + S L E N++ + +SGL+ +SR +G + Sbjct: 186 KDSEHFFFDLPQFESMLQEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHA 272 IP + YVW+DA Y+ + L N ++W D H IGKDI+ FH+ Sbjct: 243 IPGEKNKFFYVWLDAPVGYMASFKNLCNKTEGLDFDEYWKKDSTTELYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF HG++ G K+SKS G I ++ + + LRY+ + Sbjct: 303 LFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAATYLDHLDPECLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + D + + +RVNAD+ N I NL SR+ I K ++G + A E Sbjct: 363 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFISKRFEGKLSANFAEPELYNEFA 422 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLY 449 + R I E + + RA+ ++ +L + ++Y D + PW + K + Sbjct: 423 AAADR----IAELFETREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDICS 478 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P+LA + Sbjct: 479 VGINLFRVLMTYLKPVMPELAAR 501 >gi|184157057|ref|YP_001845396.1| methionyl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|294840441|ref|ZP_06785124.1| methionyl-tRNA synthetase [Acinetobacter sp. 6014059] gi|183208651|gb|ACC56049.1| Methionyl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|322506956|gb|ADX02410.1| metG [Acinetobacter baumannii 1656-2] gi|323516823|gb|ADX91204.1| methionyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715] Length = 687 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 146/546 (26%), Positives = 242/546 (44%), Gaps = 69/546 (12%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I AD+ R R G DV + D HG I A+ Sbjct: 3 KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62 Query: 66 GVT-TKVFVDQNSRNFRDMADVLDISYDDF---------IRTTEK--RHHDTCRILWKKI 113 G++ + + + RD D + +D + R+T+ ++ + I + + Sbjct: 63 GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121 Query: 114 SDKGDIYKGCY-------SGWYSLRDEAYYNDD-EVYKGADGQYYNAQH--NPVQWME-- 161 + D KG + + E Y D EV G YNA NP + Sbjct: 122 TQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVC----GTTYNATELLNPRSTLSGA 177 Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 + YFF+L + + L + + E LP+ N++ + ++GL D +SR Sbjct: 178 TPVEKSSDHYFFKLPNFAEYLQKW--TRDEGRLPLSIANKLDEWFEAGLADWDISRDAPY 235 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDI 267 +G +IPD P YVW+DA Y+++ Y+ PD + FW D H IGKDI Sbjct: 236 FGFEIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDI 295 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L AN P +F +GF+ G+K+SKS G I ++ + + LRY Sbjct: 296 VYFHALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRY 355 Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + +++ +D + D ++VN+DL + N+ SR I ++ + + A ++ Sbjct: 356 YFASKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSSTCAESDL 415 Query: 387 DESILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 +S + + E RE A+ ++++L ++Y D +KPW L K Sbjct: 416 VQSFIDAGDSIAAAYEARE------FSTAIREIMALADRANQYIDEKKPWALAKQEGQEQ 469 Query: 445 ST--VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSL 489 V V + + RQLA+ L +P LA ++ D L V+ E FQ L Sbjct: 470 QVLDVCSVGINLFRQLAVYLAPVLPTLAQQVQDFLKLESFDFESRKQILVSHEIAQFQPL 529 Query: 490 DQRLKP 495 QR+ P Sbjct: 530 MQRVDP 535 >gi|169797030|ref|YP_001714823.1| methionyl-tRNA synthetase [Acinetobacter baumannii AYE] gi|213156565|ref|YP_002318226.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB0057] gi|215484490|ref|YP_002326725.1| Methionyl-tRNA synthetase(Methionine--tRNA ligase)(MetRS) [Acinetobacter baumannii AB307-0294] gi|260555678|ref|ZP_05827898.1| methionyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] gi|294836744|ref|ZP_06781427.1| methionyl-tRNA synthetase [Acinetobacter sp. 6013113] gi|294859425|ref|ZP_06797194.1| methionyl-tRNA synthetase [Acinetobacter sp. 6013150] gi|301347637|ref|ZP_07228378.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB056] gi|301513326|ref|ZP_07238563.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB058] gi|301595850|ref|ZP_07240858.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB059] gi|169149957|emb|CAM87851.1| methionyl-tRNA synthetase [Acinetobacter baumannii AYE] gi|213055725|gb|ACJ40627.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB0057] gi|213987234|gb|ACJ57533.1| Methionyl-tRNA synthetase(Methionine--tRNA ligase)(MetRS) [Acinetobacter baumannii AB307-0294] gi|260410589|gb|EEX03887.1| methionyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] Length = 687 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 143/543 (26%), Positives = 241/543 (44%), Gaps = 63/543 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I AD+ R R G DV + D HG I A+ Sbjct: 3 KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62 Query: 66 GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + + + RD D + +D + T + ++ K + G+I Sbjct: 63 GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161 + + ++ + D KG ++ QY YNA NP + Sbjct: 122 TQLFD-PEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPV 180 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + YFF+L + + L + + E LP+ N++ + ++GL D +SR +G Sbjct: 181 EKSSDHYFFKLPNFAEYLQKW--TRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGF 238 Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDILRF 270 +IPD P YVW+DA Y+++ Y+ PD + FW D H IGKDI+ F Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDIVYF 298 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 HA++WPA L AN P +F +GF+ G+K+SKS G I ++ + + LRY+ Sbjct: 299 HALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ +D + D ++VN+DL + N+ SR I ++ + + A ++ +S Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSSTCAESDLVQS 418 Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446 + + E RE A+ ++++L ++Y D +KPW L K Sbjct: 419 FIDAGDSIAAAYEARE------FSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVL 472 Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQR 492 V V + + RQLA+ L +P LA ++ D L V+ E FQ L QR Sbjct: 473 DVCSVGINLFRQLAVYLAPVLPTLAQQVQDFLKLESFDFESRKQILVSHEIAQFQPLMQR 532 Query: 493 LKP 495 + P Sbjct: 533 VDP 535 >gi|255348394|ref|ZP_05380401.1| methionyl-tRNA synthetase [Chlamydia trachomatis 70] gi|255502935|ref|ZP_05381325.1| methionyl-tRNA synthetase [Chlamydia trachomatis 70s] Length = 550 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 137/514 (26%), Positives = 237/514 (46%), Gaps = 48/514 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 E ++ I++A+ Y N H GH AY + ADV ARF RL G +VL+ G+DE+G I Sbjct: 2 ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ AG+ + +VD + +D L IS D F RTT H + ++ + ++G + Sbjct: 60 LNAELAGMGYQEYVDMYHKLHKDTLKKLGISVDFFSRTTNAYHPAIVQDFYQNLQERGLV 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155 YS + + D V +G + Q A + Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTG 179 Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + + E + L ++ LL++ + L RN V +++ L+ +++R Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLAFVQG---IYLRPHMRNFVTDYIEH-LRPRAVTRD-L 234 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGKD 266 WGI +PD + YVW DA Y++ T + NP+ K KFW D IGKD Sbjct: 235 SWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGNPEAWK-KFWLDDTVTYAQFIGKD 293 Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324 FHA+ +PA + +LP K + + F+L +G + SKS GN ID +E +D Sbjct: 294 NTSFHAVIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSLDK 353 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L D + K R N++L GN V+R ++ +K+ + +P Sbjct: 354 LRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-QLE 412 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDR 443 + D +S ++ +++ E+ + +A + ++ L + + YF+ + PW+L K+ N +R Sbjct: 413 QKDLDFISKSQKLAKDVAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNR 472 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +L+ + LA++ +P+ A KI +++ Sbjct: 473 VRAILFCACYCQKLLALISYPIMPETALKILEMI 506 >gi|300722469|ref|YP_003711757.1| methionine tRNA synthetase [Xenorhabdus nematophila ATCC 19061] gi|297628974|emb|CBJ89559.1| methionine tRNA synthetase [Xenorhabdus nematophila ATCC 19061] Length = 675 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 130/501 (25%), Positives = 224/501 (44%), Gaps = 44/501 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+HR+ G +V F D HG I AQ + Sbjct: 7 KLLVTCALPYANGPIHLGHILEHIQADIWVRYHRMRGKEVHFVCADDAHGTPIMLKAQQS 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G++ + + + S + ISYD++ T + + ++ ++ G I S Sbjct: 67 GLSPEEMIAKVSLEHQQDFAGFAISYDNYHSTHSEENKALASHIYLELKKNGYIKNRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160 + ++ + D KG A+ QY ++P + + Sbjct: 127 QLFD-PEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCGTTYSPTELINPRSVVSGATPEM 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + E +FF L + D L + S L + N++ + +GL+ ++R +G + Sbjct: 186 RDTEHFFFDLPVFSDMLQKWTRSG---TLQEQVANKMQEWFDAGLQQWDITRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILRFHA 272 +PD P YVW+DA Y+ L D + +FW D H IGKDI+ FH+ Sbjct: 243 VPDQPGKYFYVWLDAPIGYMGAFKNLCDKRSDLNFDEFWEKDSKTDLYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L +N P +F HG+I G K+SKS G I ++ + D LRY+ + Sbjct: 303 LFWPAMLEGSNYRKPTNLFVHGYITVNGTKMSKSRGTFIKAETYLKHLDADCLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 ++ D + + +RVN+D+ N + NL SR+ I K + G + A D ++ Sbjct: 363 LSSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFINKRFGGKLSAQLA----DPALY 418 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 I E+ N+ +A+ ++++L +RY D Q PW + K A + Sbjct: 419 QKFVDAAHVIEEDFTNREFSKAIREMMALADLANRYVDEQAPWVVAKQEGRDADLQAICS 478 Query: 450 VTVEVIRQLAILLQAFVPKLA 470 + + + R L L+ +P L+ Sbjct: 479 MGINLFRVLMTYLKPVLPGLS 499 >gi|229175733|ref|ZP_04303239.1| Methionyl-tRNA synthetase 2 [Bacillus cereus MM3] gi|228607684|gb|EEK65000.1| Methionyl-tRNA synthetase 2 [Bacillus cereus MM3] Length = 544 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 132/511 (25%), Positives = 236/511 (46%), Gaps = 41/511 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K D+ F+ L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIADKYHEEFQRCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGYIYKKAVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPYCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 E ++F L +Q ++ E + E +VK GL D ++SR G+ IP Sbjct: 183 EHFYFALHTFQQQIKEAVEIAKQEGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241 Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFHAI 273 +D + +YVWI+A+T Y + + + G +FW + +V GKD + FH+I Sbjct: 242 VEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDREAKTYYVHGKDNIPFHSI 299 Query: 274 YWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 300 IWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLTVN 359 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 +D + N++L GN V+R++ I K YDG++P E E + Sbjct: 360 APENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPNGMINEELKEKVEG 419 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + V E+++ AL + V ++YFD ++PW+ ++ +P +Y V Sbjct: 420 LYIYV----GESIEQTKFKVALETIFDAVRFANKYFDERQPWKQREDDPVSCEETIYNCV 475 Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +I A LL+ F+P + ++ + L + + N Sbjct: 476 YLIANFANLLEPFLPFSSERVRNTLSIVNRN 506 >gi|152995574|ref|YP_001340409.1| methionyl-tRNA synthetase [Marinomonas sp. MWYL1] gi|150836498|gb|ABR70474.1| methionyl-tRNA synthetase [Marinomonas sp. MWYL1] Length = 678 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 139/506 (27%), Positives = 229/506 (45%), Gaps = 48/506 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60 + + K+ +++A+ Y N H+GH E I D+ RF ++ G D HG I K Sbjct: 3 QTQRKILVTSALPYANGSIHLGHMLEHIQTDIWVRFQKMRGHLCTAVCADDAHGTAIMIK 62 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AAQN G+T++ ++ + D D L I YD++ T + + + ++K + D G I Sbjct: 63 AAQN-GITSEELIEGVRQEHMADFNDFL-IGYDNYYSTHSEENREFSNSIYKALRDNGKI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160 Y E + D KG A+ QY +A + P++ + Sbjct: 121 AVRSIVQAYDPEKEMFLAD-RFIKGTCPKCKAEDQYGDNCEVCSATYTPMEMINPRSVYS 179 Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + E YFF+L +QD L + S L + N++ ++ SGLK+ +SR Sbjct: 180 GATPIEKDSEHYFFKLPDFQDFLAKWTRSG---TLQDQVANKLSEWLDSGLKEWDISRDA 236 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-AKFWPAD-----LHVIGKD 266 +G +IPD P YVW+DA Y+ + L D +G + +W D H IGKD Sbjct: 237 PYFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCDRTEGLEFDDYWAKDSDAELYHFIGKD 296 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A P V +HG++ GEK+SKS G I ++ + LR Sbjct: 297 IINFHALFWPAMLDCAGYRTPTAVNAHGYVTVDGEKMSKSRGTFIKARTYLKHLDPQYLR 356 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ D +RVN+D+ + N+ SR+ S I K +DG + + + E Sbjct: 357 YYYAAKLNSRVDDIDLSLSDFLQRVNSDIVGKVVNIASRTASFINKKFDGQLASDVSEAE 416 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--R 443 +S + I E+ + + +A+ +++ L + Y Q PW L K + Sbjct: 417 MIQSFIDAGDL----IAEHFEGREYGKAIREIMRLADVANEYIAVQAPWVLAKDEATLPQ 472 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL 469 V V + + LA L+ +P L Sbjct: 473 VQAVCTVALNLFSILATYLKPVMPNL 498 >gi|45658951|ref|YP_003037.1| methionyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|68565987|sp|Q72MR4|SYM_LEPIC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|45602196|gb|AAS71674.1| methionyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 715 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 144/558 (25%), Positives = 251/558 (44%), Gaps = 84/558 (15%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + +++A+ Y N H+GH E I D+ RF + G + F D HG + AA+ G Sbjct: 10 ILVTSALPYANGPIHLGHVLEGIQTDIWVRFQKAIGNECYFFCADDTHGTPVMLAARKEG 69 Query: 67 VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 +T + +++ ++RD+ I YD + T K + + + ++ K+ KG I + Sbjct: 70 ITPEQLIERVGQEHYRDLTS-FGIEYDHYDSTHSKANQEISKDIYLKLKSKGHISRRSIE 128 Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEE------------ 162 Y D+ + D + G + + A ++P ++ Sbjct: 129 QSYCETDKMFLPDRFIKGTCPNCKSKDQYGDNCEVCGATYSPKDLIDSHCSLCGTSPVVK 188 Query: 163 --EGYFFRLSAYQDK--------------------LLSYYESHPEFILPIERRNEVISFV 200 + FF+L + K L S+ E+ + ++ + Sbjct: 189 NSDHIFFKLGDFHKKDEKSTSLETINPSHLKTDFDLQSWIETSGVVSESEGVKKKLKEWF 248 Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT------GYLDNPDGSKAK 254 +GL+D +SR +G +IPD+ YVW+DA Y+ ++ + + P+ + Sbjct: 249 DAGLQDWDISRDGPYFGFEIPDETNKYFYVWLDAPIGYMASSKNFFEKNFPNEPNKFDS- 307 Query: 255 FWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310 FW +H IGKDIL FH ++WPA L ++ P KV HGFI GEK+SKS G Sbjct: 308 FWKNKNSEIVHFIGKDILYFHTLFWPAMLEGSDYRAPSKVHVHGFIGVNGEKMSKSRGTF 367 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKD----GFYDKDGLKKRVNADLANGIGNLVSRSV 366 I ++ + + LR++L ++ G D F D +VN+DL + N VSR Sbjct: 368 IKAETFVKYLDPEHLRFYLASKLGPGMDDIDLSFED---FINKVNSDLVGNLINSVSRVS 424 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR-----ENMQNQLIH--------RA 413 + IL D + T G S E + + + Q ++ +++QN + + + Sbjct: 425 TTIL---DALDRTLGVV--SKEGLALIEEILYQTVKFGPGEDSIQNIIKYAYDQRNYAKV 479 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 L ++ L V+RY + PW+L K NP++A V+ VT+ R LAI L VPK++ +I Sbjct: 480 LREITRLGDRVNRYVNDNAPWKLIKENPEKAREVVTVTLNASRFLAIYLYPVVPKISEQI 539 Query: 474 FDILFVADENRCFQSLDQ 491 + +L + D + F+ LD+ Sbjct: 540 YKLLNLQD-SPSFKDLDK 556 >gi|121587393|ref|ZP_01677163.1| methionyl-tRNA synthetase [Vibrio cholerae 2740-80] gi|153819292|ref|ZP_01971959.1| methionyl-tRNA synthetase [Vibrio cholerae NCTC 8457] gi|153822399|ref|ZP_01975066.1| methionyl-tRNA synthetase [Vibrio cholerae B33] gi|227081209|ref|YP_002809760.1| methionyl-tRNA synthetase [Vibrio cholerae M66-2] gi|254848166|ref|ZP_05237516.1| methionyl-tRNA synthetase [Vibrio cholerae MO10] gi|298498854|ref|ZP_07008661.1| methionyl-tRNA synthetase [Vibrio cholerae MAK 757] gi|9655500|gb|AAF94195.1| methionyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548396|gb|EAX58458.1| methionyl-tRNA synthetase [Vibrio cholerae 2740-80] gi|126510152|gb|EAZ72746.1| methionyl-tRNA synthetase [Vibrio cholerae NCTC 8457] gi|126520106|gb|EAZ77329.1| methionyl-tRNA synthetase [Vibrio cholerae B33] gi|227009097|gb|ACP05309.1| methionyl-tRNA synthetase [Vibrio cholerae M66-2] gi|254843871|gb|EET22285.1| methionyl-tRNA synthetase [Vibrio cholerae MO10] gi|297543187|gb|EFH79237.1| methionyl-tRNA synthetase [Vibrio cholerae MAK 757] Length = 731 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 139/506 (27%), Positives = 224/506 (44%), Gaps = 50/506 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 55 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 114 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ S RD A DIS+D++ T + + ++ ++ G I Sbjct: 115 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 173 Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160 S + E + D V KG A G+ Y+ NP + Sbjct: 174 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 232 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + + GL+ +SR +G Sbjct: 233 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 289 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + G ++W D H IGKDI+ FH Sbjct: 290 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 349 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G + + + + LRY+ Sbjct: 350 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 409 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVNAD+ N I NL SR+ I K +DG + A E Sbjct: 410 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 469 Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446 R+ + E RE RA+ ++ +L + ++Y D + PW + K+ D+A Sbjct: 470 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 523 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472 + V + + R L L+ +P LA + Sbjct: 524 ICTVGINLFRVLMTYLKPVMPALAER 549 >gi|26987833|ref|NP_743258.1| methionyl-tRNA synthetase [Pseudomonas putida KT2440] gi|37999413|sp|Q88NV7|SYM_PSEPK RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|24982533|gb|AAN66722.1|AE016300_7 methionyl-tRNA synthetase [Pseudomonas putida KT2440] Length = 679 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 133/521 (25%), Positives = 233/521 (44%), Gaps = 54/521 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E ++ +++A+ Y N H+GH E I D+ RF +L G ++ D HG I Sbjct: 1 MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D AD L + +D+F T + + +++ ++ + G I Sbjct: 61 RAEKEGITPEQLIANVQAEHSSDFADFL-VDFDNFHSTHSDENRELSSLIYSRLREAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQW-------- 159 + ++ ++ + D KG A+ QY A + P + Sbjct: 120 ATRSVTQYFD-PEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAIS 178 Query: 160 ------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + + +FF+L +Q L + S L N++ ++ SGL++ +SR Sbjct: 179 GATPVLRDSQHFFFKLPDFQAMLQQWTRSG---TLQDAVANKLAEWLDSGLQEWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPD---------GSKAKFWPADLHV 262 +G +IP +P YVW+DA Y+ + L P+ GSKA+ + H Sbjct: 236 PYFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWHEGSKAELY----HF 291 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 IGKDI+ FHA++WPA L A P V HG++ G K+SKS G I ++ + Sbjct: 292 IGKDIVNFHALFWPAMLEGAGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQP 351 Query: 323 DALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + LRY+ ++ G D + + ++VN+DL + N+ SR I K +G++ Sbjct: 352 EYLRYYYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNEGVMVGGD 411 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439 A E E+ L+ I E + + RA+ ++++L + + + PW L K Sbjct: 412 AAPELTEAFLAAAP----SIAEAYEARDFGRAMREIMALADRANAWIADKAPWSLAKQEG 467 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 D + + + RQL I L+ +P LA L VA Sbjct: 468 KQDEVQAICAQGINLFRQLVIFLKPVLPVLAADAEAFLNVA 508 >gi|262167212|ref|ZP_06034924.1| methionyl-tRNA synthetase [Vibrio cholerae RC27] gi|187651896|sp|A5F2P8|SYM_VIBC3 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|262024356|gb|EEY43045.1| methionyl-tRNA synthetase [Vibrio cholerae RC27] Length = 683 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 139/506 (27%), Positives = 225/506 (44%), Gaps = 50/506 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ S RD A DIS+D++ T + + ++ ++ G I Sbjct: 67 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160 S + E + D V KG A G+ Y+ NP + Sbjct: 126 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + + GL+ +SR +G Sbjct: 185 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + G + ++W D H IGKDI+ FH Sbjct: 242 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLNFNEYWNKDSKTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G + + + + LRY+ Sbjct: 302 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVNAD+ N I NL SR+ I K +DG + A E Sbjct: 362 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 421 Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446 R+ + E RE RA+ ++ +L + ++Y D + PW + K+ D+A Sbjct: 422 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 475 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472 + V + + R L L+ +P LA + Sbjct: 476 ICTVGINLFRILMTYLKPVMPALAER 501 >gi|226939673|ref|YP_002794746.1| methionyl-tRNA synthetase [Laribacter hongkongensis HLHK9] gi|226714599|gb|ACO73737.1| Sym [Laribacter hongkongensis HLHK9] Length = 684 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 155/560 (27%), Positives = 238/560 (42%), Gaps = 71/560 (12%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + ++ +++A+ Y N H+GH E I DV RF ++ G + + D HG I AA+ Sbjct: 3 KRQILVTSALPYANGAIHLGHMVEHIQTDVWVRFQKMRGHECHYVCADDTHGSPIMLAAE 62 Query: 64 NAGVTTKVFV----DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 G+T + + D++ +F I YD++ T + ++K + I Sbjct: 63 KQGITPEALIARVRDEHLADFTG----FHIGYDNYYSTNSPENKAFAEQIYKTLRASDKI 118 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME------- 161 + + + D V GA QY A ++P + Sbjct: 119 VSRTIEQLFDPEKQMFLPDRFVKGECPKCGARDQYGDNCEVCGATYSPTELKNPYSAVSG 178 Query: 162 -------EEGYFFRLSAYQDKLLSYYESHPEFI-------LPIERRNEVISFVKSGLKDL 207 E YFFRL D L + E L E N++ +++ GL+D Sbjct: 179 ATPVLKTSEHYFFRLGECADFLKDWTAGSSERADGAVQPHLQPESLNKMNEWIEGGLQDW 238 Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG----------SKAKFWP 257 +SR +G +IPD P YVW+DA Y+ + L + G SKA+ + Sbjct: 239 DISRDAPYFGFEIPDAPGKYFYVWLDAPIGYMASFQNLCDRIGIDFNEWFKADSKAEMY- 297 Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 H IGKDIL FHA++WPA L A P VF+HGF+ G+K+SKS G I + Sbjct: 298 ---HFIGKDILYFHALFWPAMLKYAGYRTPTGVFAHGFLTVDGQKMSKSRGTFITARSYL 354 Query: 318 EEVGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374 + G++ +RY++ ++ A +D D RVN+DL N+ SR+ + K +D Sbjct: 355 -DCGLNPEWMRYYIAAKLNARIEDIDLSLDDFVARVNSDLVGKFVNIASRAAGFVTKRFD 413 Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 G + A SD L I + + +AL V++L V+ Y DA KPW Sbjct: 414 GRL----ADGVSDVEPLGRLLAEAGSIAAAYEAREYAKALRDVMALADLVNAYVDANKPW 469 Query: 435 ELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADENRCFQ 487 EL + R V V + R LAI L+ +PKLA + L V AD Sbjct: 470 ELARQEGMDARLHEVCTVLINAFRLLAIYLKPVLPKLAEGVEAFLDVAPLTWADAGTVL- 528 Query: 488 SLDQRLKPGFMLHKTFDPIF 507 L +KP L + DP+ Sbjct: 529 -LGHTIKPYQHLMQRIDPVL 547 >gi|71906214|ref|YP_283801.1| methionyl-tRNA synthetase [Dechloromonas aromatica RCB] gi|123760643|sp|Q47IK0|SYM_DECAR RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|71845835|gb|AAZ45331.1| methionyl-tRNA synthetase [Dechloromonas aromatica RCB] Length = 696 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 146/523 (27%), Positives = 233/523 (44%), Gaps = 60/523 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ RF ++ G + + D HG I A+ Sbjct: 4 KILVTSALPYANGAIHLGHLVEYIQTDIWVRFQKMSGNECWYVCADDTHGTPIMLRAEKE 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + RD A + +D++ T D ++ K+ G I Sbjct: 64 GITPEQLIARVHGEHSRDFAG-FHVGFDNYYSTHSDETRDCANDIYLKLRAAGLIETRTI 122 Query: 125 SGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWME------------ 161 +Y + + D E K GA QY A + P E Sbjct: 123 EQYYDPVKQLFLPDRFIKGECPKCGAKDQYGDNCESCGAAYAPTDLKEPYSAISGAKPEL 182 Query: 162 --EEGYFFRLSAYQ-DKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214 E YFF+LS + + L Y S +L E N++ ++ ++ L D +SR Sbjct: 183 RTSEHYFFKLSDPRCEAFLRQYTSRDNGVLQNEAANKMQEWLGAPGENKLTDWDISRDAP 242 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG----------SKAKFWPADLHVIG 264 +G +IPD P YVW+DA Y+ + L +G +K + + H IG Sbjct: 243 YFGFEIPDAPGKYFYVWLDAPIGYMGSFKNLCARNGLDFNEYFKPDAKTELY----HFIG 298 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324 KDIL FHA++WPA L A P K+F+HGF+ G K+SKS G I E + G++ Sbjct: 299 KDILYFHALFWPAELAHAGFRTPTKIFAHGFLTVDGAKMSKSRGTFIT-AESFLKTGLNP 357 Query: 325 --LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 LRY+ ++ A +D D RVN+DL N+ SRS I K ++G + Sbjct: 358 EWLRYYYAAKLSATMEDIDLSLDDFVARVNSDLVGKYVNIASRSAGFITKRFNGQLAPAT 417 Query: 382 AFTESDESILSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 A + + I SR+ L E RE +A+ ++++L ++Y D+ KPWEL K Sbjct: 418 AELPAIKGIQEAASRIAELYEARE------FGKAMREIMALTDAANQYVDSVKPWELAKQ 471 Query: 440 NPDRASTVLYVT--VEVIRQLAILLQAFVPKLANKIFDILFVA 480 T + + R L +LL+ +P +A K+ L +A Sbjct: 472 EGKEVELHAACTNALNLFRLLTVLLKPILPIVAEKVEKFLNIA 514 >gi|187663990|sp|A7MZT3|SYM_VIBHB RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS Length = 686 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 135/505 (26%), Positives = 224/505 (44%), Gaps = 48/505 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + + ++ ++ G I S Sbjct: 67 GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWM------------- 160 + E + D V KG ++ QY + N P + + Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVM 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + E +FF L ++ L + S L E N++ + +SGL+ +SR +G + Sbjct: 186 KDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-AKFWPAD-----LHVIGKDILRFHA 272 IP + YVW+DA Y+ + L D +G ++W D H IGKDI+ FH+ Sbjct: 243 IPGEENKFFYVWLDAPVGYMASFKNLCDKTEGLDFDEYWKKDSSTELYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF HG++ G K+SKS G + ++ + + LRY+ + Sbjct: 303 LFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLKHLDPECLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + D + + +RVNAD+ N I NL SR+ I K ++G + A E + Sbjct: 363 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFISKRFEGKLAENFAEPELYNEFV 422 Query: 392 SVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTV 447 + R+ L E RE RA+ ++ +L + ++Y D + PW + K + Sbjct: 423 AAADRIAELYETRE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEI 476 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P LA + Sbjct: 477 CSVGINLFRVLMTYLKPVMPALAAR 501 >gi|254229863|ref|ZP_04923268.1| methionyl-tRNA synthetase [Vibrio sp. Ex25] gi|262393754|ref|YP_003285608.1| methionyl-tRNA synthetase [Vibrio sp. Ex25] gi|151937632|gb|EDN56485.1| methionyl-tRNA synthetase [Vibrio sp. Ex25] gi|262337348|gb|ACY51143.1| methionyl-tRNA synthetase [Vibrio sp. Ex25] Length = 691 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 134/507 (26%), Positives = 220/507 (43%), Gaps = 52/507 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 12 KMLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 71 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + ++ ++ G I S Sbjct: 72 GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFISSRTIS 131 Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160 + E + D D+ D G+ Y+ NP + Sbjct: 132 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 191 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + E +FF L ++ L + S L E N++ + +SGL+ +SR +G +I Sbjct: 192 DSEHFFFDLPQFESMLKEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFGFEI 248 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPAD-----LHVIGKDILRF 270 P + YVW+DA Y+ G N G + ++W D H IGKDI+ F Sbjct: 249 PGEKNKFFYVWLDAPIGYM---GSFKNLCGKRDDLDFDEYWKKDSSAELYHFIGKDIVYF 305 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L + P VF HG++ G K+SKS G + +E + + LRY+ Sbjct: 306 HSLFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYA 365 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 ++ D + + +RVNAD+ N I NL SR+ I K ++G + A E Sbjct: 366 AKLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSDNFAEPELYNE 425 Query: 390 ILSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRAS 445 ++ R+ L E RE RA+ ++ +L + ++Y D + PW + K Sbjct: 426 FVAAADRIAELYETRE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQ 479 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472 + V + + R L L+ +P LA + Sbjct: 480 DICSVGINLFRVLMTYLKPVMPALAAR 506 >gi|327542457|gb|EGF28936.1| methionyl tRNA synthetase [Rhodopirellula baltica WH47] Length = 679 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 141/512 (27%), Positives = 217/512 (42%), Gaps = 55/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 +L ++ A+ Y N HIGH E + D+ RF +L G L+ D HG I A+ Sbjct: 4 RLLVTAALPYANGPIHIGHLVEYLQTDIWVRFQKLRGNRCLYICADDTHGTAIMIRARGE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G + +++ S RD A I +D + T + + C +WK + D + + Sbjct: 64 GRSEIELIEETSEAHQRDFAG-FGIEFDHYGSTNSEENRTLCHQIWKSLRDADLVVERSV 122 Query: 125 SGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQH--------NPVQWM-------- 160 Y E + D V G N H +PV + Sbjct: 123 EQLYDPEAETFLADRFVRGTCPKCGTPNQAGDNCNCGHTYSPTELIDPVSTLSGATPIIK 182 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E E F L D LS + S+ + P F+ L+D +SR +G +I Sbjct: 183 EAEHLFVELEKLHD-FLSEWVSNSGALQPETANYLKGHFLADELRDWDISRPAPYFGFEI 241 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDILRFHAIYW 275 PD P YVW DA Y+ +T + +G A +W +D H IGKDI FH ++W Sbjct: 242 PDAPGNYWYVWFDAPIGYIASTQQWCDANGEDLADWWKSDDCEVHHFIGKDITYFHTLFW 301 Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL------ 329 P L +A LP KV HGF+ G+K+SKS G + ++ + ALRYF Sbjct: 302 PGMLKTAGFSLPTKVHIHGFLNVNGKKMSKSDGTFVKAETFLKHIDPSALRYFYATKLSS 361 Query: 330 -VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 V ++ G D F +K VN+DL + NL SR + G+ P+ D Sbjct: 362 RVEDLDLGVDEFVEK------VNSDLVGKVVNLASRVGKFASR--TGLAPS----YPEDG 409 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST-- 446 + + EI ++ +A+ ++ L + + + KPWE+ K +P+R Sbjct: 410 GLFQAAAAKGDEIASAYEDGEFSKAMRLIMELADAANPFVEHAKPWEMNK-DPERQDELR 468 Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V V + + RQLA+ L +P+LA K D+L Sbjct: 469 DVCTVALNLFRQLAVYLAPVLPELAKKCGDLL 500 >gi|254513805|ref|ZP_05125866.1| methionyl-tRNA synthetase [gamma proteobacterium NOR5-3] gi|219676048|gb|EED32413.1| methionyl-tRNA synthetase [gamma proteobacterium NOR5-3] Length = 684 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 130/547 (23%), Positives = 244/547 (44%), Gaps = 56/547 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + + ++ +++A+ Y N H+GH E + D+ RF R G + + D HG I + Sbjct: 3 QAKRRILVTSALPYANGPLHLGHILEQVQTDIWVRFQRSRGHECHYICADDAHGTAIMLS 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G+T + ++ ++ ++ IS+D+F T +++++ G I + Sbjct: 63 AERQGITPEQQIEAIHKDHLSASNDFAISFDNFYSTHSDETRHWAETIYQRLQAAGAISE 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM--------- 160 + Y ++ + D KG+ + + A ++P + + Sbjct: 123 REITQAYD-PEKGLFLADRFIKGSCPKCKTPDQYGDNCEACGATYSPTELIDPVSALSGA 181 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 + +FFRL + L + S L N++ + L++ +SR Sbjct: 182 TPVERQSRHFFFRLPMFAGMLREWIASG---TLQDAVANKLREWTDGELQEWDISRDAPY 238 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILR 269 +G IP + YVW+DA Y+ + Y + + FW H +GKDI+ Sbjct: 239 FGFTIPGETDKYFYVWLDAPIGYMGSFQNYCERSGVTFDDFWQPGGDTELYHFVGKDIIN 298 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH ++WPA L SA L P VF HGF+ G K+SKS G I+ ++ + + LRY+ Sbjct: 299 FHGLFWPAMLHSAALRTPTGVFVHGFLTVDGTKMSKSRGTFINARHYLDHLDAEYLRYYF 358 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 ++ G D + + +RVN+D+ + N+ SR + K +D + + + S+ Sbjct: 359 AAKLGAGVDDIDLNLEDFVQRVNSDVVGKVVNIASRCAGFLRKGFDNQMSS----SCSEP 414 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 +L + + I + +++ +A+ ++ L ++Y D KPW + K +P++A+ V Sbjct: 415 ELLQSFTEAGEGIAKAYEDREFSKAVRLIMELADRANQYIDQHKPWVMAK-DPEQAAQVQ 473 Query: 449 YVT---VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML-HK--T 502 V + R L I LQ +PK+A + + L RC +LD +L H+ T Sbjct: 474 AVCSTGINCFRMLMIYLQPVLPKMAERAANYL------RC--NLDWEQNSSLLLDHQLAT 525 Query: 503 FDPIFPR 509 F+P+ R Sbjct: 526 FEPLVQR 532 >gi|153215088|ref|ZP_01949805.1| methionyl-tRNA synthetase [Vibrio cholerae 1587] gi|124114951|gb|EAY33771.1| methionyl-tRNA synthetase [Vibrio cholerae 1587] Length = 731 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 138/504 (27%), Positives = 223/504 (44%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 55 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 114 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ S RD A DIS+D++ T + + ++ ++ G I Sbjct: 115 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 173 Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160 S + E + D V KG A G+ Y+ NP + Sbjct: 174 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 232 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + + GL+ +SR +G Sbjct: 233 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 289 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + G ++W D H IGKDI+ FH Sbjct: 290 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 349 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G + + + + LRY+ Sbjct: 350 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 409 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVNAD+ N I NL SR+ I K +DG + A E Sbjct: 410 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 469 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVL 448 R I E + + RA+ ++ +L + ++Y D + PW + K+ D+A + Sbjct: 470 AGATDR----IAELFETREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDIC 525 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P LA + Sbjct: 526 TVGINLFRVLMTYLKPVMPALAER 549 >gi|90579105|ref|ZP_01234915.1| methionyl-tRNA synthetase [Vibrio angustum S14] gi|90439938|gb|EAS65119.1| methionyl-tRNA synthetase [Vibrio angustum S14] Length = 681 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 136/506 (26%), Positives = 224/506 (44%), Gaps = 50/506 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E + AD+ R+ RL G +V F D HG I AQ Sbjct: 7 KILVTCALPYANGSIHLGHMLEHVQADIWVRYQRLRGNEVHFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ + + + S+ + DI + ++ T + + ++ ++ DKG I S Sbjct: 67 GMEPEQMIAEVSKEHQADFAGFDIDFSNYHSTHSPENRELASFVYTQLKDKGFITSRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN---------------------PVQ 158 + E + D V KG A+ QY + N PV Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPVM 185 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + +S L E N++ + +SGL+ +SR +G Sbjct: 186 -KDSEHFFFDLPQFESMLKEWTKSG---ALQEETSNKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + D + +FW D H IGKDI+ FH Sbjct: 242 EIPGETGKYFYVWLDAPIGYMGSFKNLCDKRDDLNFDEFWNKDSSTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L A P VF HG++ G K+SKS G I ++ + + LRY+ Sbjct: 302 SLFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLKHLDPECLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVN+D+ N I NL SR+ I K +DG + E Sbjct: 362 KLNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFIAKRFDGKLSDNFVEPELYAEF 421 Query: 391 LSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRAST 446 + R+ L E RE RA+ ++ +L + ++Y D + PW + K Sbjct: 422 VEAADRIGELYESRE------FGRAIREITALADKANQYVDEKAPWVVAKQEGKDQELQE 475 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472 + V + + R L L+ +PKLA + Sbjct: 476 ICTVGINLFRVLMAYLKPVMPKLAER 501 >gi|328474598|gb|EGF45403.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus 10329] Length = 688 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 134/504 (26%), Positives = 221/504 (43%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 12 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 71 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + + ++ ++ G I S Sbjct: 72 GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 131 Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160 + E + D D+ D G+ Y+ NP + Sbjct: 132 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 191 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + E +FF L ++ L + S L E N++ + +SGL+ +SR +G +I Sbjct: 192 DSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEI 248 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273 P + YVW+DA Y+ + L N D ++W D H IGKDI+ FH++ Sbjct: 249 PGEKDKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSL 308 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L + P VF HG++ G K+SKS G + ++ + + LRY+ ++ Sbjct: 309 FWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAKL 368 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + + +RVNAD+ N I NL SR+ I K ++G + A E ++ Sbjct: 369 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFVA 428 Query: 393 VCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVL 448 R+ + E RE RA+ +V +L + ++Y D + PW + K + Sbjct: 429 AADRIAELFEARE------FGRAIREVTALADKANQYVDEKAPWVVAKEEGKDQELQEIC 482 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P LA + Sbjct: 483 SVGINLFRVLMTYLKPVMPALAAR 506 >gi|254291743|ref|ZP_04962529.1| methionyl-tRNA synthetase [Vibrio cholerae AM-19226] gi|150422336|gb|EDN14297.1| methionyl-tRNA synthetase [Vibrio cholerae AM-19226] Length = 731 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 139/506 (27%), Positives = 225/506 (44%), Gaps = 50/506 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 55 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 114 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ S RD A DIS+D++ T + + ++ ++ G I Sbjct: 115 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 173 Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160 S + E + D V KG A G+ Y+ NP + Sbjct: 174 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 232 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + + GL+ +SR +G Sbjct: 233 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 289 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + G + ++W D H IGKDI+ FH Sbjct: 290 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLNFNEYWNKDSKTELYHFIGKDIVYFH 349 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G + + + + LRY+ Sbjct: 350 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 409 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVNAD+ N I NL SR+ I K +DG + A E Sbjct: 410 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 469 Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446 R+ + E RE RA+ ++ +L + ++Y D + PW + K+ D+A Sbjct: 470 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 523 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472 + V + + R L L+ +P LA + Sbjct: 524 ICTVGINLFRVLMTYLKPVMPALAER 549 >gi|163752281|ref|ZP_02159480.1| methionyl-tRNA synthetase [Shewanella benthica KT99] gi|161327824|gb|EDP99005.1| methionyl-tRNA synthetase [Shewanella benthica KT99] Length = 694 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 137/508 (26%), Positives = 232/508 (45%), Gaps = 49/508 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ ARF ++ G + + D HG I AQ Sbjct: 5 QRKILVTSALPYANGPIHLGHMLEYIQTDIWARFQKMRGHECHYICADDAHGTAIMLKAQ 64 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + + Q N + +D AD +I +D+F T + + ++ K+ D G I Sbjct: 65 QLGMEPEEMIAQVNKEHQQDFAD-FNIQFDNFHSTHSVENRELASEIYLKLRDSGYIETR 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160 S + +++ + D KG ++ QY A +NP + Sbjct: 124 TISQLFD-PEKSMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYNPTDMINPKSAISGAT 182 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + E +FF L A++ L + S L E N++ ++K GL+ +SR + Sbjct: 183 PIMKDSEHFFFDLPAFEGMLKEWTRSG---ALQDEVANKLDEWLKQGLQQWDISRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILR 269 G +IPD P YVW+DA Y+ + L + D + FW D H IGKDI+ Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDRREDLNFDDFWAKDSTAEVYHFIGKDIIN 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH ++WPA L A P V++HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 FHCLFWPAMLEGAGYRKPTNVYAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYY 359 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +RVN+DL + NL SR+ I K +D G F + + Sbjct: 360 AAKLSNRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFD------GKFAKVAD 413 Query: 389 SILSVCSRVLQE-IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRAS 445 + L QE I E + + +A+ ++++L + Y PW+L K + A Sbjct: 414 TTLEQVFLGKQEVIAELYEGREFGKAMREIMALADMANAYVADAAPWQLIKQEDTQEEAH 473 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473 V + + R L L+ +PKLA+ + Sbjct: 474 QVCSNALNLFRILVTYLKPVLPKLADDV 501 >gi|91773875|ref|YP_566567.1| methionyl-tRNA synthetase [Methanococcoides burtonii DSM 6242] gi|121691622|sp|Q12UQ9|SYM_METBU RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|91712890|gb|ABE52817.1| Methionyl-tRNA synthetase [Methanococcoides burtonii DSM 6242] Length = 684 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 127/493 (25%), Positives = 221/493 (44%), Gaps = 40/493 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ + Y N + H+GH + AD+ R + G +V F G+D HG I A+ Sbjct: 10 VLVTCGLPYANGKAHVGHLRTYVPADIFTRSLKKTGQEVTFVCGSDTHGTPIVFNAEELK 69 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG---- 122 T + ++F ++ + + D F T + +H+ + K+ + G +Y Sbjct: 70 TTPTEIIKVYHKHFDEIFKKMGVMLDAFGTTDDPTNHNRTTEIVSKLIENGYVYPKTIEI 129 Query: 123 --CYSGWYSLRD----------EAYYNDDEVYKGADGQYYNAQ---------HNPVQWME 161 C S SL D + DE +G + + P ++ + Sbjct: 130 AYCPSCDRSLPDRYVKGTCPHCKKEARGDECDQGCGKHLEPGELEHPACTTCNGPAEYKQ 189 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 +E +FF+LS ++D LL Y E + RN + +VK L D ++R + DWGIK P Sbjct: 190 QEHFFFKLSQFKDFLLEYLEG---LGGTLNARNYALGWVKQELTDWCITR-SLDWGIKFP 245 Query: 222 DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPA 277 ++YVW+DA Y+ T + + + S KFW D +H IG DI+ H I+WPA Sbjct: 246 GHEDLVVYVWVDAPIGYIAFTEEWAEANNESWEKFWKDDGSIIHFIGGDIIYHHCIFWPA 305 Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIAC 335 L A P V + G + + SKS G V+ E + G D LRY+L + Sbjct: 306 MLKGAGYNQPDAVVASGMVKIEDRTFSKSRGYVVWVDEDYLDHGFHQDLLRYYLASYTSH 365 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 K+ + + +VN +L GN + R++ K++ G IP E + IL + Sbjct: 366 TKELNFSWKVFQDKVNTELVGVFGNFLYRTLLFTHKNF-GEIPE----GEVKQDILDEIN 420 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 ++ +E M+N + V++L S + YF + +PW+L K N + ++ ++ Sbjct: 421 TTIENAKEAMENYEFKKYADTVMALASYGNTYFQSNEPWKLIKENKEACGEIVKNCAQIT 480 Query: 456 RQLAILLQAFVPK 468 + L +L + +P+ Sbjct: 481 KALCLLFEPILPE 493 >gi|270158203|ref|ZP_06186860.1| methionyl-tRNA synthetase [Legionella longbeachae D-4968] gi|289163540|ref|YP_003453678.1| methionyl-tRNA synthetase [Legionella longbeachae NSW150] gi|269990228|gb|EEZ96482.1| methionyl-tRNA synthetase [Legionella longbeachae D-4968] gi|288856713|emb|CBJ10524.1| methionyl-tRNA synthetase [Legionella longbeachae NSW150] Length = 552 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 141/506 (27%), Positives = 224/506 (44%), Gaps = 51/506 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 MK+R K+ +++A+ Y N H+GH E I D+ R H++ G++ + G D HG I Sbjct: 1 MKQR-KMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMSGIECISICGDDAHGTPIML 59 Query: 61 AAQNAGVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116 A+ G+T + + + R+F+ A I YD + T + +++K+ Sbjct: 60 KAEQMGLTPETLTAEIKLSHERDFKAFA----IDYDCYHTTHSPENQALAAAIYEKLKAN 115 Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWM----- 160 G I K Y E + D V GA QY A ++P + Sbjct: 116 GSIIKRTIHQAYDPVKEMFLPDRYVKGTCPKCGAKDQYGDNCEVCGATYSPTDLIDAVSA 175 Query: 161 ---------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211 E E YFF L Y++ L + L E N++ + +GLK +SR Sbjct: 176 ISGAKPIEKESEHYFFDLPRYENLLKEWTRGGH---LQTEVANKLDEWFAAGLKQWDISR 232 Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGK 265 +G IP YVW+DA Y+ + Y D S A+FW D H +GK Sbjct: 233 DAPYFGFPIPGTTDKYFYVWLDAPIGYMASFKKYCDEHGVSFAEFWNKDSDTELYHFVGK 292 Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 DI+ FHA++WPA L ++ P V++HGF+ G+K+SKS G ++ IE + + L Sbjct: 293 DIVYFHALFWPAMLAASGHRTPTAVYTHGFLTVDGQKMSKSRGTFLEARTYIEYLHPEYL 352 Query: 326 RYFLVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 RY+ ++ G+ D + D R+NADL + N+ SR I K +D + Sbjct: 353 RYYFAAKLN-GRVDDLDLNFDDFTSRINADLVGKVVNIASRCAGFINKRFDNTLSE---- 407 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 S+ + + V EI E+ ++ RA+ ++ +V++Y D KPW L K +R Sbjct: 408 HLSEPQLYAELIAVRSEIIESFVSRDYARAIRHIMDCADKVNQYIDTNKPWVLAKEE-ER 466 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL 469 V + I IL+ P L Sbjct: 467 LCEVQDICTMGINLFRILITYLKPVL 492 >gi|261211930|ref|ZP_05926216.1| methionyl-tRNA synthetase [Vibrio sp. RC341] gi|260838538|gb|EEX65189.1| methionyl-tRNA synthetase [Vibrio sp. RC341] Length = 683 Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 139/506 (27%), Positives = 224/506 (44%), Gaps = 50/506 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ S RD A DIS+D++ T + + ++ ++ G I Sbjct: 67 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160 S + E + D V KG A G+ Y+ NP + Sbjct: 126 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + + GL+ +SR +G Sbjct: 185 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + G ++W D H IGKDI+ FH Sbjct: 242 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G + + + + LRY+ Sbjct: 302 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVNAD+ N I NL SR+ I K +DG + A E Sbjct: 362 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 421 Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446 R+ + E RE RA+ ++ +L + ++Y D + PW + K+ D+A Sbjct: 422 AGAADRIAELFEARE------FGRAVREITALADKANQYVDEKAPWVVAKQEGQDQALQD 475 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472 + V + + R L L+ +P LA + Sbjct: 476 ICTVGINLFRVLMTYLKPVMPALAER 501 >gi|153800950|ref|ZP_01955536.1| methionyl-tRNA synthetase [Vibrio cholerae MZO-3] gi|124123541|gb|EAY42284.1| methionyl-tRNA synthetase [Vibrio cholerae MZO-3] Length = 731 Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 139/506 (27%), Positives = 224/506 (44%), Gaps = 50/506 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 55 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 114 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ S RD A DIS+D++ T + + ++ ++ G I Sbjct: 115 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 173 Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160 S + E + D V KG A G+ Y+ NP + Sbjct: 174 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 232 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + + GL+ +SR +G Sbjct: 233 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 289 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + G ++W D H IGKDI+ FH Sbjct: 290 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 349 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G + + + + LRY+ Sbjct: 350 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 409 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVNAD+ N I NL SR+ I K +DG + A E Sbjct: 410 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 469 Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446 R+ + E RE RA+ ++ +L + ++Y D + PW + K+ D+A Sbjct: 470 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 523 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472 + V + + R L L+ +P LA + Sbjct: 524 ICTVGINLFRVLMTYLKPVMPALAER 549 >gi|269962055|ref|ZP_06176409.1| methionyl-tRNA synthetase [Vibrio harveyi 1DA3] gi|269833139|gb|EEZ87244.1| methionyl-tRNA synthetase [Vibrio harveyi 1DA3] Length = 686 Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 134/504 (26%), Positives = 221/504 (43%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + + ++ ++ G I S Sbjct: 67 GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126 Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160 + E + D D+ D G+ Y+ NP + Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 186 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + E +FF L ++ L + S L E N++ + +SGL+ +SR +G +I Sbjct: 187 DSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEI 243 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-AKFWPAD-----LHVIGKDILRFHAI 273 P + YVW+DA Y+ + L D +G ++W D H IGKDI+ FH++ Sbjct: 244 PGEKNKFFYVWLDAPVGYMASFKNLCDKTEGLDFDEYWKKDSTTELYHFIGKDIVYFHSL 303 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L + P VF HG++ G K+SKS G + + + + LRY+ ++ Sbjct: 304 FWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKL 363 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + + +RVNAD+ N I NL SR+ I K ++G + A E ++ Sbjct: 364 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFISKRFEGKLAENFAEPELYNEFVA 423 Query: 393 VCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVL 448 R+ L E RE RA+ ++ +L + ++Y D + PW + K + Sbjct: 424 AADRIAELYETRE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P LA + Sbjct: 478 SVGINLFRVLMTYLKPVMPALAAR 501 >gi|187649786|sp|Q2FU77|SYM_METHJ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS Length = 664 Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 130/526 (24%), Positives = 233/526 (44%), Gaps = 47/526 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 L ++ + Y N H+GH + AD RF R G +V+F G+D HG I +A+ G Sbjct: 6 LLVTCGLPYTNGPCHLGHLRTYVPADFYVRFMRRKGEEVVFICGSDNHGTPIVVSAEKEG 65 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + ++ +F D + + +D F T + H + L ++ D+G +Y Sbjct: 66 TTPRQISERYHTHFSDTFTKMQVHFDHFGMTDDPTTHARTKHLVSRLIDRGYVYPKVIQQ 125 Query: 127 WYSLRDEAYYND----------------DEVYKGADGQYYNAQ---------HNPVQWME 161 Y + + + D DE +G + N ++ E Sbjct: 126 AYCIHCQKFLPDRYLEGICPHCKKPARGDECDQGCGKHLEPGEILEPTCKICGNRAEYRE 185 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 +E +FF+LS +QD L Y E N + +V L D ++R T +WG+K P Sbjct: 186 QEHFFFKLSGFQDWLREYLG---ELKGTDNAINYALGWVNEDLHDWCITR-TLEWGVKFP 241 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRFHAIYWP 276 ++YVW+DA Y+ T G K +W + H IG+DI H ++WP Sbjct: 242 GHDDLVVYVWVDAPIGYIGFTEEWAEKTGRDWKTYWCGENTRVTHFIGQDITYHHCVFWP 301 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIA 334 A L A P V + G + K SKS G V+ E + G+ D LRY+L+ + Sbjct: 302 AMLHGAGYGTPYAVVASGMLKIDDHKFSKSRGYVVWTNEDYLDQGLPADYLRYYLLSYTS 361 Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 K+ + ++R+N ++ N +GN + RS+ + K + G+ P E + I Sbjct: 362 HTKEMNFSWQLFQERINNEVVNNLGNFIYRSLHLSQKQFGGV---PEGVVE--QEIFDRI 416 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 + + ++ ++ A+ +++L + + Y +++PW+L KT+ + V+ +++ Sbjct: 417 TEAIGQVTGLVEAYDFKGAVDAILALSAWGNTYIQSKEPWKLAKTDQAAMAQVMRNCLQL 476 Query: 455 IRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQRLKPG 496 + L +L++ +P+ A I+ L +A N F + + L PG Sbjct: 477 AKALTLLIEPVMPERAGLIWSQLGQDSLIA--NNGFSAGLEPLSPG 520 >gi|160891633|ref|ZP_02072636.1| hypothetical protein BACUNI_04086 [Bacteroides uniformis ATCC 8492] gi|156859040|gb|EDO52471.1| hypothetical protein BACUNI_04086 [Bacteroides uniformis ATCC 8492] Length = 702 Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 141/516 (27%), Positives = 247/516 (47%), Gaps = 49/516 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DV+F G+DEHG I Sbjct: 25 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPITI 84 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + +S+D + RTT K HHDT ++K+ DKG+ Sbjct: 85 RAKKEGITPQDVVDRYHTLIKKSFEEFGVSFDVYSRTTSKTHHDTASDFFRKLYDKGEFI 144 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + A+G Y + + Sbjct: 145 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 204 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210 PV E + ++ L +++ L + E H E+ R N + S++ GL+ ++S Sbjct: 205 QPVM-RETKHWYLPLDKHEEWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 258 Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIG 264 R DWGI +P + ++YVW DA Y++ T L PD + K+W +H IG Sbjct: 259 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-TWEKWWKDPETRLVHFIG 315 Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--G 321 KD + FH I +PA L + + LP V S+ F+ +G+KIS S + E + + Sbjct: 316 KDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLVDFPGK 375 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D LRY L KD + + R N +L GN V+R++ + K +D ++P G Sbjct: 376 QDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDSVVPAAG 435 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 + D L + V E+ + + A + ++L ++Y +PW+L KT+ Sbjct: 436 ELNDYDRETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDM 495 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +R +T+L+++++++ LAI + F+P + K+ +L Sbjct: 496 ERVATILHISLQLVANLAIAFEPFLPFSSEKLRKML 531 >gi|270295309|ref|ZP_06201510.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274556|gb|EFA20417.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 680 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 141/516 (27%), Positives = 247/516 (47%), Gaps = 49/516 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DV+F G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + +S+D + RTT K HHDT ++K+ DKG+ Sbjct: 63 RAKKEGITPQDVVDRYHTLIKKSFEEFGVSFDVYSRTTSKTHHDTASDFFRKLYDKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + A+G Y + + Sbjct: 123 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210 PV E + ++ L +++ L + E H E+ R N + S++ GL+ ++S Sbjct: 183 QPVM-RETKHWYLPLDKHEEWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236 Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIG 264 R DWGI +P + ++YVW DA Y++ T L PD + K+W +H IG Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-TWEKWWKDPETRLVHFIG 293 Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--G 321 KD + FH I +PA L + + LP V S+ F+ +G+KIS S + E + + Sbjct: 294 KDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLVDFPGK 353 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D LRY L KD + + R N +L GN V+R++ + K +D ++P G Sbjct: 354 QDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDSVVPAAG 413 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 + D L + V E+ + + A + ++L ++Y +PW+L KT+ Sbjct: 414 ELNDYDRETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDM 473 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +R +T+L+++++++ LAI + F+P + K+ +L Sbjct: 474 ERVATILHISLQLVANLAIAFEPFLPFSSEKLRKML 509 >gi|297578641|ref|ZP_06940569.1| methionyl-tRNA synthetase [Vibrio cholerae RC385] gi|297536235|gb|EFH75068.1| methionyl-tRNA synthetase [Vibrio cholerae RC385] Length = 731 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 139/506 (27%), Positives = 224/506 (44%), Gaps = 50/506 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 55 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 114 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ S RD A DIS+D++ T + + ++ ++ G I Sbjct: 115 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 173 Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160 S + E + D V KG A G+ Y+ NP + Sbjct: 174 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 232 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + + GL+ +SR +G Sbjct: 233 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 289 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + G ++W D H IGKDI+ FH Sbjct: 290 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 349 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G + + + + LRY+ Sbjct: 350 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 409 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVNAD+ N I NL SR+ I K +DG + A E Sbjct: 410 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 469 Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446 R+ + E RE RA+ ++ +L + ++Y D + PW + K+ D+A Sbjct: 470 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 523 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472 + V + + R L L+ +P LA + Sbjct: 524 ICTVGINLFRVLMTYLKPVMPALAER 549 >gi|32473761|ref|NP_866755.1| methionyl-tRNA synthetase [Rhodopirellula baltica SH 1] gi|68565994|sp|Q7URP3|SYM_RHOBA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|32444297|emb|CAD74295.1| methionyl-tRNA synthetase [Rhodopirellula baltica SH 1] Length = 679 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 141/512 (27%), Positives = 216/512 (42%), Gaps = 55/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 +L ++ A+ Y N HIGH E + D+ RF +L G L+ D HG I A+ Sbjct: 4 RLLVTAALPYANGPIHIGHLVEYLQTDIWVRFQKLRGNRCLYICADDTHGTAIMIRARGE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G + +++ S RD A I +D + T + + C +WK + D + + Sbjct: 64 GRSEIELIEETSEAHQRDFAG-FGIEFDHYGSTNSEENRTLCHQIWKSLRDADLVVERSV 122 Query: 125 SGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQH--------NPVQWM-------- 160 Y E + D V G N H +PV + Sbjct: 123 EQLYDPEAETFLADRFVRGTCPKCGTPNQAGDNCNCGHTYSPTELIDPVSTLSGATPIIK 182 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E E F L D LS + S+ + P F+ L+D +SR +G +I Sbjct: 183 EAEHLFVELEKLHD-FLSEWVSNSGALQPETANYLKGHFLADELRDWDISRPAPYFGFEI 241 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDILRFHAIYW 275 PD P YVW DA Y+ +T + +G A +W +D H IGKDI FH ++W Sbjct: 242 PDAPGNYWYVWFDAPIGYIASTQQWCDANGEDLADWWKSDDCEVHHFIGKDITYFHTLFW 301 Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL------ 329 P L +A LP KV HGF+ G+K+SKS G + ++ + ALRYF Sbjct: 302 PGMLKTAGFSLPTKVHIHGFLNVNGKKMSKSDGTFVKAETFLKHIDPSALRYFYATKLSS 361 Query: 330 -VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 V ++ G D F +K VN+DL + NL SR + G+ P+ D Sbjct: 362 RVEDLDLGVDEFVEK------VNSDLVGKVVNLASRVGKFASR--TGLAPS----YPEDG 409 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST-- 446 + + EI ++ +A+ ++ L + + + KPWE+ K P+R Sbjct: 410 GLFQAAAAKGDEIASAYEDGEFSKAMRLIMELADAANPFVEHAKPWEMNKA-PERQDELR 468 Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V V + + RQLA+ L +P+LA K D+L Sbjct: 469 DVCTVALNLFRQLAVYLAPVLPELAKKCGDLL 500 >gi|325578269|ref|ZP_08148404.1| methionyl-tRNA synthetase [Haemophilus parainfluenzae ATCC 33392] gi|325160005|gb|EGC72134.1| methionyl-tRNA synthetase [Haemophilus parainfluenzae ATCC 33392] Length = 682 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 133/503 (26%), Positives = 238/503 (47%), Gaps = 45/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G + F D HG I A Sbjct: 7 KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIYFVCADDAHGTPIMLNADKL 66 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + RD A +IS+D++ T + + ++ K+ K I Sbjct: 67 GITPEELIAKAKADHVRDFAG-FNISFDNYHSTHSEENKQITAEIYNKLKAKDFIKTKVI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPI 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A++ L + S L E N++ + +SGL+ +SR +G Sbjct: 185 IKESEHFFFDLPAFEGMLKEWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272 +IP YVW+DA Y+ + L + +G +FW A+L H IGKDI+ FH+ Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCDREGIDFNEFWGENSDAELYHFIGKDIVYFHS 301 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF+HG++ G K+SKS G I + + + LRY+ + Sbjct: 302 LFWPAMLEGSEYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361 Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + +D ++ + +RVN D+ N + NL SR+ I K ++G + A DE++ Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDEALF 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + ++I +++ ++A+ ++++L + ++Y D + PW + K + V Sbjct: 418 AEFTAQAEQIATYYESREYNKAIREIMTLTDKANKYIDEKAPWVIAKEDGKETELQAVCS 477 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +PKLA + Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500 >gi|153835356|ref|ZP_01988023.1| methionyl-tRNA synthetase [Vibrio harveyi HY01] gi|148868127|gb|EDL67289.1| methionyl-tRNA synthetase [Vibrio harveyi HY01] Length = 686 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 135/505 (26%), Positives = 223/505 (44%), Gaps = 48/505 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + + ++ ++ G I S Sbjct: 67 GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWM------------- 160 + E + D V KG ++ QY + N P + + Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVM 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + E +FF L ++ L + S L E N++ + +SGL+ +SR +G + Sbjct: 186 KDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-AKFWPAD-----LHVIGKDILRFHA 272 IP + YVW+DA Y+ + L D +G ++W D H IGKDI+ FH+ Sbjct: 243 IPGEKNKFFYVWLDAPVGYMASFKNLCDKTEGLDFDEYWKKDSSTELYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF HG++ G K+SKS G + + + + LRY+ + Sbjct: 303 LFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + D + + +RVNAD+ N I NL SR+ I K ++G + A E + Sbjct: 363 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFISKRFEGKLAENFAEPELYNEFV 422 Query: 392 SVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTV 447 + R+ L E RE RA+ ++ +L + ++Y D + PW + K + Sbjct: 423 AAADRIAELYETRE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEI 476 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P LA + Sbjct: 477 CSVGINLFRVLMTYLKPVMPALAAR 501 >gi|121728181|ref|ZP_01681216.1| methionyl-tRNA synthetase [Vibrio cholerae V52] gi|147673338|ref|YP_001216504.1| methionyl-tRNA synthetase [Vibrio cholerae O395] gi|121629578|gb|EAX62001.1| methionyl-tRNA synthetase [Vibrio cholerae V52] gi|146315221|gb|ABQ19760.1| methionyl-tRNA synthetase [Vibrio cholerae O395] gi|227012852|gb|ACP09062.1| methionyl-tRNA synthetase [Vibrio cholerae O395] Length = 731 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 139/506 (27%), Positives = 225/506 (44%), Gaps = 50/506 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 55 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 114 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ S RD A DIS+D++ T + + ++ ++ G I Sbjct: 115 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 173 Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160 S + E + D V KG A G+ Y+ NP + Sbjct: 174 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 232 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + + GL+ +SR +G Sbjct: 233 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 289 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + G + ++W D H IGKDI+ FH Sbjct: 290 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLNFNEYWNKDSKTELYHFIGKDIVYFH 349 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G + + + + LRY+ Sbjct: 350 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 409 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVNAD+ N I NL SR+ I K +DG + A E Sbjct: 410 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 469 Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446 R+ + E RE RA+ ++ +L + ++Y D + PW + K+ D+A Sbjct: 470 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 523 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472 + V + + R L L+ +P LA + Sbjct: 524 ICTVGINLFRILMTYLKPVMPALAER 549 >gi|157961740|ref|YP_001501774.1| methionyl-tRNA synthetase [Shewanella pealeana ATCC 700345] gi|189083265|sp|A8H3V2|SYM_SHEPA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|157846740|gb|ABV87239.1| methionyl-tRNA synthetase [Shewanella pealeana ATCC 700345] Length = 679 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 146/542 (26%), Positives = 240/542 (44%), Gaps = 63/542 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ +RF +L G + + D HG I AQ Sbjct: 5 QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLKAQ 64 Query: 64 NAGVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+T + + Q + +D AD +I +D+F T + + ++ K+ D G I Sbjct: 65 QLGMTPEDMIAQVQKEHEKDFAD-FNIQFDNFHSTHSDENRELASEIYIKLRDAGYIKTK 123 Query: 123 CYSGWYS------------------LRDEAYYNDDEVYKGA--------DGQYYNAQHNP 156 S + + E Y D+ GA D + + P Sbjct: 124 TISQLFDPEKSMFLPDRFVKGTCPRCKSEDQYGDNCDNCGATYSTTDLIDPKSAVSGATP 183 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 V + E +FF L +++ L + S L E N++ + + GL+ +SR + Sbjct: 184 VM-KDTEHFFFDLPSFEGMLKEWINSGS---LQQEMANKLGEWFEQGLQQWDISRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILR 269 G +IPD P YVW+DA Y+ + L N D + FW D H IGKDI+ Sbjct: 240 GFEIPDAPGKFFYVWLDAPIGYMGSFKNLCNKRDDLNFDDFWSKDSTAEVYHFIGKDIVY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH+++WPA L A L P V++HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 FHSLFWPAMLEGAGLRKPTSVYAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYY 359 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +RVN+DL + NL SR+ I K +DG + A T E Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLAKI-ADTSLTE 418 Query: 389 SILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRA 444 S L+ + E RE +A+ +V++L + Y PW+L K + + A Sbjct: 419 SFLAKQETIANFYETRE------FGKAMREVMTLADIANAYVADSAPWQLIKDDAKQEEA 472 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKI------------FDILFVADENRCFQSLDQR 492 V + + R L L+ +PKLA + D+ E F++L QR Sbjct: 473 HQVCTNALNLFRILVTYLKPVLPKLAQDVEAFLQMELTWDNLDVDLAGHEIAKFKALMQR 532 Query: 493 LK 494 ++ Sbjct: 533 VE 534 >gi|153824980|ref|ZP_01977647.1| methionyl-tRNA synthetase [Vibrio cholerae MZO-2] gi|153828134|ref|ZP_01980801.1| methionyl-tRNA synthetase [Vibrio cholerae 623-39] gi|254226392|ref|ZP_04919980.1| methionyl-tRNA synthetase [Vibrio cholerae V51] gi|125621081|gb|EAZ49427.1| methionyl-tRNA synthetase [Vibrio cholerae V51] gi|148876376|gb|EDL74511.1| methionyl-tRNA synthetase [Vibrio cholerae 623-39] gi|149741492|gb|EDM55522.1| methionyl-tRNA synthetase [Vibrio cholerae MZO-2] Length = 731 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 139/506 (27%), Positives = 224/506 (44%), Gaps = 50/506 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 55 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 114 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ S RD A DIS+D++ T + + ++ ++ G I Sbjct: 115 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 173 Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160 S + E + D V KG A G+ Y+ NP + Sbjct: 174 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 232 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + + GL+ +SR +G Sbjct: 233 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 289 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + G ++W D H IGKDI+ FH Sbjct: 290 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 349 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L + P VF HG++ G K+SKS G + + + + LRY+ Sbjct: 350 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 409 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVNAD+ N I NL SR+ I K +DG + A E Sbjct: 410 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 469 Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446 R+ + E RE RA+ ++ +L + ++Y D + PW + K+ D+A Sbjct: 470 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 523 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472 + V + + R L L+ +P LA + Sbjct: 524 ICTVGINLFRVLMTYLKPVMPALAER 549 >gi|88604058|ref|YP_504236.1| methionyl-tRNA synthetase [Methanospirillum hungatei JF-1] gi|88189520|gb|ABD42517.1| methionyl-tRNA synthetase [Methanospirillum hungatei JF-1] Length = 690 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 130/526 (24%), Positives = 233/526 (44%), Gaps = 47/526 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 L ++ + Y N H+GH + AD RF R G +V+F G+D HG I +A+ G Sbjct: 32 LLVTCGLPYTNGPCHLGHLRTYVPADFYVRFMRRKGEEVVFICGSDNHGTPIVVSAEKEG 91 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + ++ +F D + + +D F T + H + L ++ D+G +Y Sbjct: 92 TTPRQISERYHTHFSDTFTKMQVHFDHFGMTDDPTTHARTKHLVSRLIDRGYVYPKVIQQ 151 Query: 127 WYSLRDEAYYND----------------DEVYKGADGQYYNAQ---------HNPVQWME 161 Y + + + D DE +G + N ++ E Sbjct: 152 AYCIHCQKFLPDRYLEGICPHCKKPARGDECDQGCGKHLEPGEILEPTCKICGNRAEYRE 211 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 +E +FF+LS +QD L Y E N + +V L D ++R T +WG+K P Sbjct: 212 QEHFFFKLSGFQDWLREYLG---ELKGTDNAINYALGWVNEDLHDWCITR-TLEWGVKFP 267 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRFHAIYWP 276 ++YVW+DA Y+ T G K +W + H IG+DI H ++WP Sbjct: 268 GHDDLVVYVWVDAPIGYIGFTEEWAEKTGRDWKTYWCGENTRVTHFIGQDITYHHCVFWP 327 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIA 334 A L A P V + G + K SKS G V+ E + G+ D LRY+L+ + Sbjct: 328 AMLHGAGYGTPYAVVASGMLKIDDHKFSKSRGYVVWTNEDYLDQGLPADYLRYYLLSYTS 387 Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 K+ + ++R+N ++ N +GN + RS+ + K + G+ P E + I Sbjct: 388 HTKEMNFSWQLFQERINNEVVNNLGNFIYRSLHLSQKQFGGV---PEGVVE--QEIFDRI 442 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 + + ++ ++ A+ +++L + + Y +++PW+L KT+ + V+ +++ Sbjct: 443 TEAIGQVTGLVEAYDFKGAVDAILALSAWGNTYIQSKEPWKLAKTDQAAMAQVMRNCLQL 502 Query: 455 IRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQRLKPG 496 + L +L++ +P+ A I+ L +A N F + + L PG Sbjct: 503 AKALTLLIEPVMPERAGLIWSQLGQDSLIA--NNGFSAGLEPLSPG 546 >gi|161511054|ref|NP_798448.2| methionyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|260879483|ref|ZP_05891838.1| methionine--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|260898218|ref|ZP_05906714.1| methionine--tRNA ligase [Vibrio parahaemolyticus Peru-466] gi|260903217|ref|ZP_05911612.1| methionine--tRNA ligase [Vibrio parahaemolyticus AQ4037] gi|61252102|sp|Q87N07|SYM_VIBPA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|308088382|gb|EFO38077.1| methionine--tRNA ligase [Vibrio parahaemolyticus Peru-466] gi|308093540|gb|EFO43235.1| methionine--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|308106544|gb|EFO44084.1| methionine--tRNA ligase [Vibrio parahaemolyticus AQ4037] Length = 688 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 133/504 (26%), Positives = 221/504 (43%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 12 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 71 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + + ++ ++ G I S Sbjct: 72 GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 131 Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160 + E + D D+ D G+ Y+ NP + Sbjct: 132 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 191 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + E +FF L ++ L + S L E N++ + +SGL+ +SR +G +I Sbjct: 192 DSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEI 248 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273 P + YVW+DA Y+ + L N D ++W D H IGKDI+ FH++ Sbjct: 249 PGEKDKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSL 308 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L + P VF HG++ G K+SKS G + ++ + + LRY+ ++ Sbjct: 309 FWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAKL 368 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + + +RVNAD+ N I NL SR+ I K ++G + A E ++ Sbjct: 369 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFVA 428 Query: 393 VCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVL 448 R+ + E RE RA+ ++ +L + ++Y D + PW + K + Sbjct: 429 AADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEIC 482 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P LA + Sbjct: 483 SVGINLFRVLMTYLKPVMPALAAR 506 >gi|301056527|ref|YP_003794738.1| methionine--tRNA ligase [Bacillus anthracis CI] gi|300378696|gb|ADK07600.1| methionine--tRNA ligase [Bacillus cereus biovar anthracis str. CI] Length = 544 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 136/540 (25%), Positives = 245/540 (45%), Gaps = 54/540 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL---HVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G + FW + +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEEIGKDDREFWDGEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + I Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 R+ + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V +I A LL+ F+P + +I + L + + N +P L D + P F Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524 >gi|283783692|ref|YP_003374446.1| methionine--tRNA ligase [Gardnerella vaginalis 409-05] gi|283441551|gb|ADB14017.1| methionine--tRNA ligase [Gardnerella vaginalis 409-05] Length = 625 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 147/530 (27%), Positives = 245/530 (46%), Gaps = 70/530 (13%) Query: 7 LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A Sbjct: 6 ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 65 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV+ + ++ +R +D+ D L +SYD F RTT H + ++++ G IYKG Sbjct: 66 GVSAQELANRYNRVITKDLCD-LGLSYDLFTRTTTANHEHVVQEMFRQCLKNGYIYKGTQ 124 Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158 S +L D Y GADG + NPV + Sbjct: 125 KVAISPSTGRTLPDR-YIEGTCPLCGADGARGDQCDACGNELDPDELINPVSKINGETPR 183 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF---VKSGLKDLSLSRKTFD 215 + E E YF L A + +++ S + R VI+F + + +K +++R D Sbjct: 184 FEETEHYFLDLPALAEANVNWLHSREGW------RTNVINFSLGLFNEVKPRAITRD-ID 236 Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVI 263 WGI +P D+P +YVW DA+ YL+ + G + W D + + Sbjct: 237 WGIPVPVEGWIDNPNKRLYVWFDAVIGYLSASIEWARRQGKPEAWRDWWCDPKSPGYYFM 296 Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309 GKD + FH+ WP+ +L+ N L +P++V + F+ +G+K S S G Sbjct: 297 GKDNITFHSQIWPSEMLAYNGAGSKGGEAGIYGPLNMPEQVVASEFMTMEGKKFSSSRGI 356 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 VI +++ VDA+RY++ D + + N +LA GNLV+R ++I Sbjct: 357 VIYVKDILARYPVDAVRYYISIAGPENSDADFTWAEFARHNNEELAASWGNLVNRVANLI 416 Query: 370 LKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 K++ G+IP + T D ++L S + ++ AL + + +V+++++Y Sbjct: 417 NKNF-GVIPPLDEDSMTAMDRALLDQTSDAFALVGSLIERHRQKNALTEAMRVVADINKY 475 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A +PW++K + R TVL+V + + LL F+P A K+++ L Sbjct: 476 ISATEPWKIKD-DEARLGTVLHVAAQAVSDANHLLAPFLPHAAQKVWEAL 524 >gi|297538808|ref|YP_003674577.1| methionyl-tRNA synthetase [Methylotenera sp. 301] gi|297258155|gb|ADI30000.1| methionyl-tRNA synthetase [Methylotenera sp. 301] Length = 686 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 144/529 (27%), Positives = 241/529 (45%), Gaps = 51/529 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ RF ++ G V + D HG I A+ Sbjct: 9 KILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGHTVHYVCADDTHGTPIMLRAEKE 68 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + +D + + D ++ L + +D++ T + + + +++K+ G I Sbjct: 69 GITPEALIDGVHKEHTADFSEFL-VEFDNYYSTNAPENKELSQSIYRKLKANGKIATKII 127 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160 +Y + D KG A QY A +NP + + Sbjct: 128 EQFYDPVKNMFL-PDRFIKGECPKCHAKDQYGDSCEVCGATYNPTELINAYSAVSGAAPI 186 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E YFF+LS + L + S L E N++ + ++GL D +SR +G Sbjct: 187 RKETEHYFFKLSECEQFLKDWTRSG---TLQGEAANKMGEWFENGLNDWDISRDAPYFGF 243 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHA 272 +IPD P YVW+DA Y+ + L G ++W D H IGKDIL FHA Sbjct: 244 EIPDAPGKYFYVWLDAPIGYMASFKNLCQAKGLDFDEYWSKDSKTELYHFIGKDILYFHA 303 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-GVDALRYFLVR 331 ++WPA L + P ++F+HGF+ GEK+SKS G I +E + + LRY+ Sbjct: 304 LFWPATLEFSGHRKPTQIFAHGFLTVNGEKMSKSRGTFITARSYLEHIKNPEYLRYYYAA 363 Query: 332 EI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDES 389 +I + +D D RVN+DL N+ SR+ I K +DG + PT ++ Sbjct: 364 KINSTMEDIDLSLDDFVARVNSDLVGKYINIASRTAGFINKRFDGKLNPT------ANNI 417 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STV 447 +++ I E+ + + +AL +++ L + + + PW + K+ D A V Sbjct: 418 VVAEIKASAHAIAESYEAREYGKALREIMRLADIANGFVADKAPWVIAKQEGQDEALQQV 477 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496 +E+ R L + L+ +PKLA +I L + E +Q++ L P Sbjct: 478 CSDALEMFRLLTLYLKPVLPKLAYEIERFLNI--EPLIWQAVGASLLPA 524 >gi|229032677|ref|ZP_04188640.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1271] gi|228728676|gb|EEL79689.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1271] Length = 544 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 132/513 (25%), Positives = 239/513 (46%), Gaps = 45/513 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K D+ F+ L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGYIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E+ + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKRAVETAKQ--TGAWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G +FW + +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEEAGKDDQEFWGKEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 +I WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SIIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G +P G+ D + Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGTVPK-GSI---DVEL 413 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + + I E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 414 KGKVEGLYKNIGEAIEQTTFKVALETIFDAVRFANKYFDERQPWKQREDDPVACEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V +I A LL+ F+P + ++ + L + +N Sbjct: 474 CVYLIVNFANLLEPFLPFSSERVRNTLSIVKQN 506 >gi|313675114|ref|YP_004053110.1| methionyl-tRNA synthetase [Marivirga tractuosa DSM 4126] gi|312941812|gb|ADR21002.1| methionyl-tRNA synthetase [Marivirga tractuosa DSM 4126] Length = 688 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 136/515 (26%), Positives = 234/515 (45%), Gaps = 48/515 (9%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I+ A+ Y N HIGH A + AD+ R+ RL +V F G+DEHG I A+ G+ Sbjct: 10 ITAALPYANGPLHIGHIAGAYLPADIFVRYLRLRKKEVAFMCGSDEHGAAITIRAKKEGI 69 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T +D+ + + I++D + RT+E HH+ + + K+ +KG+ + + Sbjct: 70 TPNAIIDKYHELNKKTFEKFGIAFDMYHRTSEPSHHELSQEFFTKLYEKGEFEERESEQY 129 Query: 128 YSLRDEAY-------YNDDEVYKGADGQYYNAQH-------------NPVQWMEEEG--- 164 Y DE + Y + K + Y Q NPV + + Sbjct: 130 Y---DEEFNQFLADRYITGKCPKCGNESAYGDQCEKCGSSLNPTDLINPVSTLSGKTPIL 186 Query: 165 -----YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 +F L YQ+ + + + + S++ GL+ +++R DWG+ Sbjct: 187 KKTTHWFLPLDKYQEWMEKWLVEGKKGKWKSNVYGQCSSWLNQGLQARAMTR-DLDWGVD 245 Query: 220 IP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW-----PAD----LHVIGKDI 267 +P +YVW+DA Y++ T G+ KFW P D +H IGKD Sbjct: 246 VPLKGAEGKKLYVWLDAPIGYISATKQWAKDTGNDWEKFWKKQENPEDDSTLIHFIGKDN 305 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324 + FH I +P L + + LP+ V ++ F+ +G K+S S + E +E D Sbjct: 306 IVFHCIIFPVILHAHGDYILPENVPANEFLNLEGHKLSTSRNWAVWLHEYLESFPGKEDV 365 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L + KD + + R N++L GN ++R+V + K YDG +P G + Sbjct: 366 LRYALAATLPETKDSEFTWKDFQTRNNSELVAIFGNFINRAVVLTHKYYDGKVPERGEWF 425 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 + D+ IL+ I E + N ALA ++ ++Y +PW+L+K NP+R Sbjct: 426 DYDQEILNELKGYPDLIEEKIVNYKFREALAAMMEFARLGNKYLAETEPWKLQKENPERV 485 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 T++ + +++ L+I+ + F+P A K+ +L + Sbjct: 486 KTIMNLALQIAANLSIVCEPFLPFTATKLRKMLNI 520 >gi|16273191|ref|NP_439429.1| methionyl-tRNA synthetase [Haemophilus influenzae Rd KW20] gi|260581399|ref|ZP_05849213.1| methionyl-tRNA synthetase [Haemophilus influenzae RdAW] gi|1174532|sp|P43828|SYM_HAEIN RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|1574731|gb|AAC22924.1| methionyl-tRNA synthetase (metG) [Haemophilus influenzae Rd KW20] gi|260091941|gb|EEW75890.1| methionyl-tRNA synthetase [Haemophilus influenzae RdAW] Length = 682 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 133/503 (26%), Positives = 236/503 (46%), Gaps = 45/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ RF R+ G + F D HG I A Sbjct: 7 KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + RD A +IS+D++ T + + ++ K+ G I Sbjct: 67 GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160 S + + D V KG A+ QY + + ++P+ + Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A++ L + S L E N++ + +S L+ +SR +G Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESDLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272 +IP YVW+DA Y+ + L N +G +FW A+L H IGKDI+ FH+ Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF+HG++ G K+SKS G I + + + LRY+ + Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361 Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + +D ++ + +RVN D+ N + NL SR+ I K ++G + A D+S+ Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDKSLF 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449 + + ++I +++ ++ + ++++L + ++Y D + PW + K A V Sbjct: 418 AEFTAQAEQIAAYYESREYNKTIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + +E+ R L L+ +PKLA + Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500 >gi|225012064|ref|ZP_03702501.1| methionyl-tRNA synthetase [Flavobacteria bacterium MS024-2A] gi|225003619|gb|EEG41592.1| methionyl-tRNA synthetase [Flavobacteria bacterium MS024-2A] Length = 684 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 137/531 (25%), Positives = 244/531 (45%), Gaps = 65/531 (12%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 ++ A+ Y N HIGH A + AD+ R+ R G DVLF G+DEHG I+ A+ G Sbjct: 7 VTAALPYTNGPIHIGHLAGVYVPADIYTRYLRCQGKDVLFICGSDEHGVAISLKAKKEGK 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK----------- 116 T + +D+ RD + I++D++ RT+ + H++T + ++K + K Sbjct: 67 TPQEIIDKYDLIIRDSFEKFGIAFDNYSRTSREIHYETAQEIFKNLEAKSVFELKESEQL 126 Query: 117 ---------------------------GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149 GD + C S SL + G Sbjct: 127 FDEEAQQFLADRFVTGTCPICSHPEAYGDQCESCGS---SLNATELIDPKSTISGGKPAL 183 Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLS 208 + +H ++ L+ Y+D + ++ E H + P +V S+V +GL+ + Sbjct: 184 KSTKH----------WYLPLNRYEDFIKNWILEGHKKDWKP-NVYGQVKSWVDNGLQPRA 232 Query: 209 LSRKTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LH 261 ++R DWGI +P ++YVW DA Y+++T +G+ + + D +H Sbjct: 233 VTRD-LDWGIPVPVIGGEGKVLYVWFDAPIGYISSTKEWAQQNGTDWEPYWKDKETQLVH 291 Query: 262 VIGKDILRFHAIYWPAFL-LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 IGKD + FH I +P L + + LP+ V ++ F+ +G+KIS S + E +EE Sbjct: 292 FIGKDNIVFHCIIFPIILHANGHYILPENVPANEFLNLEGQKISTSKNWAVWLHEYLEEF 351 Query: 321 --GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 D LRY L KD + D + R N +L GN ++R V + K YDG +P Sbjct: 352 PDQQDVLRYVLTANAPETKDNDFTWDEFQARNNNELVAIFGNFINRVVVLTHKYYDGKVP 411 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 T+ D+++L + + Q+I + ++ A ++ L ++Y +PW+L K Sbjct: 412 KSENLTDFDKAVLEEMALLPQKIGQAIEQYRFREASQTLMQLARLGNKYLADSEPWKLIK 471 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489 T+P R +T+++ +++ L+IL + +P A K+ +L + + + S+ Sbjct: 472 TDPQRVTTIMHTALQIAAGLSILCEPILPFTAEKLTKMLCLNSKKLSWDSV 522 >gi|296438335|gb|ADH20488.1| methionyl-tRNA synthetase [Chlamydia trachomatis E/11023] Length = 550 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 137/514 (26%), Positives = 236/514 (45%), Gaps = 48/514 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 E ++ I++A+ Y N H GH AY + ADV ARF RL G +VL+ G+DE+G I Sbjct: 2 ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ AG+ + +VD + +D L IS D F RTT H + ++ + ++G + Sbjct: 60 LNAELAGMGYQEYVDMYHKLHKDTLKKLGISVDFFSRTTNAYHPAIVQDFYQNLQERGLV 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155 YS + + D V +G + Q A + Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTG 179 Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + + E + L ++ LL++ + L RN V +++ L+ +++R Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLAFVQG---IYLRPHMRNFVTDYIEH-LRPRAVTRD-L 234 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGKD 266 WGI +PD + YVW DA Y++ T + NP+ K KFW D IGKD Sbjct: 235 SWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGNPEAWK-KFWLDDTVTYAQFIGKD 293 Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324 FHA+ +PA + +LP K + + F+L +G + SKS GN ID +E +D Sbjct: 294 NTSFHAVIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNSIDMDAFLETYSLDK 353 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L D + K R N++L GN V+R ++ +K+ + +P Sbjct: 354 LRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-QLE 412 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDR 443 + D +S ++ ++ E+ + +A + ++ L + + YF+ + PW+L K+ N +R Sbjct: 413 QKDLDFISKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNR 472 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +L+ + LA++ +P+ A KI +++ Sbjct: 473 VRAILFCACYCQKLLALISYPIIPETALKILEMI 506 >gi|110598424|ref|ZP_01386696.1| methionyl-tRNA synthetase:methionyl-tRNA synthetase, beta subunit [Chlorobium ferrooxidans DSM 13031] gi|110339958|gb|EAT58461.1| methionyl-tRNA synthetase:methionyl-tRNA synthetase, beta subunit [Chlorobium ferrooxidans DSM 13031] Length = 702 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 133/525 (25%), Positives = 241/525 (45%), Gaps = 55/525 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M ++ ++TA+ Y N H+GH A + AD+ R+ RL G D+L G+DEHG I Sbjct: 1 MSHFKRTLVTTALPYANGPVHLGHLAGVYLPADIYVRYKRLKGEDILHIGGSDEHGVPIT 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G++ + VD+ R D IS+D + RT+ HH T + + +I KG Sbjct: 61 ITAEREGISPQDVVDRYHRMNLDAFRKCAISFDYYGRTSSATHHATAQEFFTEIEHKGIF 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG---- 164 K ++ + + + +D V G + +P++ + + Sbjct: 121 NKKTEKLFFDRKADRFLSDRYVTGTCPICNNPEANGDQCEQCGTHLSPLELINPKSKLSD 180 Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLS 210 ++F L +Q +L +Y SH + E R+ V+++ +K GL D +++ Sbjct: 181 ETPELRDTMHWYFPLGRFQPQLEAYVNSHED-----EWRSNVVNYSRTWLKQGLNDRAIT 235 Query: 211 RKTFDWGIKIPDDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKAK---FW--PAD-- 259 R +WGIK+P D ++YVW DA+ Y++ T GS + +W P Sbjct: 236 RD-LNWGIKVPLDSAEAEGKVLYVWFDAVLGYISFTREWAQEQGSPDRWKEYWQDPESRL 294 Query: 260 LHVIGKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVID 312 +H IGKD + FH + +PA L++ N L V + F+ +G K SKS + Sbjct: 295 VHFIGKDNVVFHTLMFPAILMAWNEGRMEGCYNLADNVPASEFMNFEGRKFSKSRNYAVY 354 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 E +E+ D LRY + KD + + R N +LA+ +GN + RS+ Sbjct: 355 LGEFLEKFPADTLRYSIAMNYPENKDTDFSWLDFQNRTNGELADTLGNFIKRSIDFTNAR 414 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 +DG +P F E + +I +L ++ + AL+ + + +R+ + Sbjct: 415 FDGEVPYACTFDEWN-TIGIDWQELLSQLDLAFEQFHFRDALSLGMEMARAANRFLTEAE 473 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 PW++ K++ + A+ + +++ + LA+ L +P +N+I+ +L Sbjct: 474 PWKVIKSDREEAAKTMALSLNLCHALAVALYPVIPGTSNRIYAML 518 >gi|315644563|ref|ZP_07897695.1| methionyl-tRNA synthetase [Paenibacillus vortex V453] gi|315280070|gb|EFU43367.1| methionyl-tRNA synthetase [Paenibacillus vortex V453] Length = 546 Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 147/543 (27%), Positives = 239/543 (44%), Gaps = 61/543 (11%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+G ++ DVLAR+ R G VL+ +G+D HG +A A G Sbjct: 4 IFIGGAWPYANGSLHLGRLASLLPGDVLARYFRAKGEQVLYVSGSDCHGTPVAVQAIQEG 63 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT + D+ F + L SYD + RT ++ HH + L+ K+ D G +Y+ Sbjct: 64 VTPRDIADRYHGEFAKCFEQLGFSYDLYTRTDQEFHHGVVQELFLKLLDNGYLYRKTIQQ 123 Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQH------------------------NPVQWMEE 162 Y D + D V A+ NP Sbjct: 124 TYCETDRRFLPDRYVEGDCPVCGSRARGDQCDVCSTLLDPSDLSNRACKICGNPPVERPT 183 Query: 163 EGYFFRLSAYQDKL---LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E Y+ LS +Q +L L+ + E + + RR +++ GL D + +R WG+ Sbjct: 184 EHYYVSLSHFQAELTDDLNNAKGWRENAIQLTRR-----YLEEGLVDRAATRD-LTWGVD 237 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPAD------LHVIGKDIL 268 +P +D + +YVWI+A++ YL+ + + G FW + +V GKD + Sbjct: 238 VPVPGFEDKK--IYVWIEAVSGYLSASKQWAAETGGDWESFWLKEREDITAYYVHGKDNI 295 Query: 269 RFHAIYWPAFLLSAN-LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 FH + WPA L A L +P ++ S ++ +G+K S S I +++ D++RY Sbjct: 296 PFHTLIWPALLKGAGGLHVPDRIISCEYMTLEGKKFSTSRNWAIWVPDLLSRYQPDSIRY 355 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES- 386 FL+ +D + N +L GNLV+R++ + K +DG +P G TE Sbjct: 356 FLIANGPEKRDTDFSWREFIHSHNGELLGAFGNLVNRTLVFVNKSFDGKVPE-GRITEEW 414 Query: 387 ---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 ES+ +++E R + AL + S V ++YFD +KPW K + + Sbjct: 415 QRRMESLYREAGTLIEEGR-------LKEALELIFSTVRHANKYFDERKPWIQVKEDREA 467 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV--ADENRCFQSLDQRLKPGFMLHK 501 L+ V++I L LLQ F+P +KI L + A N C +RL +L + Sbjct: 468 CGDTLFTCVQIIANLTNLLQPFIPFSCDKIRGFLSLKPAAWNWCNVPAGERLHHVELLFE 527 Query: 502 TFD 504 D Sbjct: 528 RID 530 >gi|269967339|ref|ZP_06181400.1| methionyl-tRNA synthetase [Vibrio alginolyticus 40B] gi|269828047|gb|EEZ82320.1| methionyl-tRNA synthetase [Vibrio alginolyticus 40B] Length = 691 Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 133/504 (26%), Positives = 220/504 (43%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 12 KMLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 71 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + ++ ++ G I S Sbjct: 72 GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFISSRTIS 131 Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160 + E + D D+ D G+ Y+ NP + Sbjct: 132 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 191 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + E +FF L ++ L + S L E N++ + +SGL+ +SR +G +I Sbjct: 192 DSEHFFFDLPQFESMLKEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFGFEI 248 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273 P + YVW+DA Y+ + L + D ++W D H IGKDI+ FH++ Sbjct: 249 PGEKNKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWKKDSSAELYHFIGKDIVYFHSL 308 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L + P VF HG++ G K+SKS G + +E + + LRY+ ++ Sbjct: 309 FWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYAAKL 368 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + + +RVNAD+ N I NL SR+ I K ++G + A E ++ Sbjct: 369 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFVA 428 Query: 393 VCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVL 448 R+ L E RE RA+ ++ +L + ++Y D + PW + K + Sbjct: 429 AADRIAELYETRE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDIC 482 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P LA + Sbjct: 483 SVGINLFRVLMTYLKPVMPSLAAR 506 >gi|329962356|ref|ZP_08300361.1| methionine--tRNA ligase [Bacteroides fluxus YIT 12057] gi|328530217|gb|EGF57098.1| methionine--tRNA ligase [Bacteroides fluxus YIT 12057] Length = 680 Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 143/516 (27%), Positives = 246/516 (47%), Gaps = 49/516 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DV+F G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + IS+D + RTT + HH+T ++K+ DKG+ Sbjct: 63 RAKKEGITPQDVVDRYHTLIKKSFEDFGISFDVYSRTTSETHHETASDFFRKLYDKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + A+G Y + + Sbjct: 123 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210 PV E + ++ L +++ L + E H E+ R N + S++ GL+ ++S Sbjct: 183 QPVM-RETKHWYLPLDKHEEWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236 Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIG 264 R DWGI +P + ++YVW DA Y++ T L PD S K+W +H IG Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLVHFIG 293 Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--G 321 KD + FH I +PA L + + LP V S+ F+ +G+KIS S + E + + Sbjct: 294 KDNIVFHCIVFPAMLKAEGSFILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPGK 353 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D LRY L KD + + R N +L GN V+R++ + K ++G++P G Sbjct: 354 QDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFNGVVPAAG 413 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 T+ D L V E+ + + A + ++L ++Y +PW+L KT+ Sbjct: 414 ELTDYDRETLKEFEDVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDM 473 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 R ST+L ++++++ LAI + F+P + K+ +L Sbjct: 474 ARVSTILNISLQLVANLAIAFEPFLPFSSEKLRRML 509 >gi|297620945|ref|YP_003709082.1| Methionyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] gi|297376246|gb|ADI38076.1| Methionyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] Length = 674 Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 137/515 (26%), Positives = 232/515 (45%), Gaps = 48/515 (9%) Query: 4 REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R+K+ I++A+ Y N H GH A + D ARF RL G D L+ G+DE+G I +A Sbjct: 3 RQKVLITSALPYANGPLHFGHIAGAYLPGDCYARFQRLIGSDTLYICGSDEYGVAITLSA 62 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + AG T K VD + + L++S+D + RTT + H +K + + G I + Sbjct: 63 EIAGRTPKEHVDLYHEVIKGLFQKLNLSFDHYSRTTWEGHEKPVHQYFKDLLENGYIEEK 122 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-------------------------PV 157 YS +D+ + D V G ++ P+ Sbjct: 123 VTDQLYSEQDKRFLADRYVVGVCPGCGFDCARGDECPQCGASYEATDLKNPRSKLTNAPL 182 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-- 215 + +F +L ++++L + S E + V++FVK +K+L T D Sbjct: 183 TRKATKHWFLKLDRFKERLTEWLNSK-------EWKPNVVNFVKGYIKNLRPRAITRDSE 235 Query: 216 WGIKIP--DDPQYIMYVWIDALTNYLTTT--GYLDNPDGSKAKFWPAD-----LHVIGKD 266 WG+ +P + ++YVW DA YL+ T L D + K + D ++ IGKD Sbjct: 236 WGVPVPLSNTEGKVLYVWFDAPIGYLSATMEWALKKGDPEQWKAYWCDESTTLVNFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324 + FHA +PA + N P L + ++ F L +G + SKS G ID + E D Sbjct: 296 NIPFHAAIFPAMTMGQNQPYKLVDHLPANEFYLLEGRQFSKSEGWYIDLDQFFERYTADQ 355 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 +RY + D + + + N DL GNL +R + K+ G +P Sbjct: 356 IRYAIAANAPETSDSEFTWKDFQYKCNGDLLGKYGNLANRIMVFSHKNVHGKVPARKNLD 415 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 E D++ LS ++ + + Q+ + +A ++ L + YFD ++PW+L K R Sbjct: 416 EVDKAFLSSIDVLVDQAFQCYQSFSLRKACQVIMELAQRGNIYFDGKQPWKLAKDPEQRE 475 Query: 445 --STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 TVL +E ++ LA++ +P+ A+K++ +L Sbjct: 476 VLETVLSCCLECLKALALISSPILPETADKLWTML 510 >gi|254507772|ref|ZP_05119903.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus 16] gi|219549297|gb|EED26291.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus 16] Length = 686 Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 135/505 (26%), Positives = 223/505 (44%), Gaps = 48/505 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + + ++ ++ G I S Sbjct: 67 GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWME------------ 161 + E + D V KG ++ QY + N P + ++ Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVM 185 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E +FF L ++ L + S L E N++ + +SGL+ +SR +G + Sbjct: 186 KDSEHFFFDLPQFESMLKEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272 IP + YVW+DA Y+ + L + D ++W D H IGKDI+ FH+ Sbjct: 243 IPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWKKDSTTELYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF HG++ G K+SKS G I ++ + + LRY+ + Sbjct: 303 LFWPAMLEGSGFRKPDNVFVHGYVTVNGAKMSKSKGTFIKAATYLDHLDPECLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + D + + +RVNAD+ N I NL SR+ I K ++G + A E + Sbjct: 363 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSANFAEPELYKEFA 422 Query: 392 SVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTV 447 R+ L E RE RA+ ++ +L + ++Y D + PW + K + Sbjct: 423 DAADRIAELYETRE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDI 476 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P+LA + Sbjct: 477 CSVGINLFRVLMTYLKPVMPELAAR 501 >gi|329923262|ref|ZP_08278747.1| methionine--tRNA ligase [Paenibacillus sp. HGF5] gi|328941497|gb|EGG37788.1| methionine--tRNA ligase [Paenibacillus sp. HGF5] Length = 546 Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 138/511 (27%), Positives = 231/511 (45%), Gaps = 51/511 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++I A Y N H+G ++ DVLAR+ R G VL+ +G+D HG +A A Sbjct: 3 NIFIGGAWPYANGSLHLGRLASLLPGDVLARYFRAKGDHVLYVSGSDCHGTPVAVQAIQE 62 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT D+ F + L SYD + RT + HH + L+ K+ D G +Y+ Sbjct: 63 GVTPGDIADRYHAEFAECFAQLGFSYDLYTRTDQAFHHGVVQELFLKLLDNGHLYRKTVL 122 Query: 126 GWYSLRDEAYYNDDEVY-------KGADGQYYNAQH-----------------NPVQWME 161 Y D + D V A G +A NP Sbjct: 123 QTYCETDRRFLPDRYVEGDCPVCGSRARGDQCDACSTMLDPSDLTNRTCKMCGNPPVERP 182 Query: 162 EEGYFFRLSAYQDKL---LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E ++ LS +Q +L LS+ + + + + RR +++ GL+D + +R WG+ Sbjct: 183 TEHFYVALSHFQAELADDLSHAQGWRDNAVHMTRR-----YLEEGLQDRAATRD-LTWGV 236 Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWP------ADLHVIGKDI 267 +P +D + +YVWI+A++ YL+ + + G FW +V GKD Sbjct: 237 DVPVPGFEDKK--IYVWIEAVSGYLSASKQWAAETGGDWEPFWRKGQGEVTAYYVHGKDN 294 Query: 268 LRFHAIYWPAFLLSA-NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 + FH + WPA L A +L P ++ S ++ +G+K S S I +++ D++R Sbjct: 295 IPFHTLIWPALLKGAGDLHQPDRIISCEYMTLEGKKFSTSRNWAIWVPDLLRRYQPDSIR 354 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 YFL+ +D + N +L GNLV+R++ K +DG +P G+ ++ Sbjct: 355 YFLIANGPEKRDADFSWREFIHSHNGELLGAFGNLVNRTLVFANKSFDGKVPE-GSISDE 413 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 + L + Q+ ++ + AL + S+V + ++YFD +KPW K + T Sbjct: 414 WQGRLEA---LYQQAGALIEEGRLKEALELIFSVVRQANKYFDERKPWIQVKEDRAACGT 470 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 LY + ++ LA LLQ F+P ++I D L Sbjct: 471 TLYTCILIMANLANLLQPFIPFSCDRIRDFL 501 >gi|323498216|ref|ZP_08103218.1| methionyl-tRNA synthetase [Vibrio sinaloensis DSM 21326] gi|323316644|gb|EGA69653.1| methionyl-tRNA synthetase [Vibrio sinaloensis DSM 21326] Length = 686 Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 135/505 (26%), Positives = 223/505 (44%), Gaps = 48/505 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + + ++ ++ G I S Sbjct: 67 GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWME------------ 161 + E + D V KG ++ QY + N P + ++ Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVM 185 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E +FF L ++ L + S L E N++ + +SGL+ +SR +G + Sbjct: 186 KDSEHFFFDLPQFESMLQEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272 IP + YVW+DA Y+ + L + D ++W D H IGKDI+ FH+ Sbjct: 243 IPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKDSSTELYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF HG++ G K+SKS G I ++ + + LRY+ + Sbjct: 303 LFWPAMLEGSGFRKPDNVFVHGYVTVNGAKMSKSKGTFIKAATYLDHLDPECLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + D + + +RVNAD+ N I NL SR+ I K ++G + A E Sbjct: 363 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSANFAEPELYNEFA 422 Query: 392 SVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTV 447 + R+ L E RE RA+ ++ +L + ++Y D + PW + K + Sbjct: 423 AAADRIAELYETRE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDI 476 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P+LA + Sbjct: 477 CSVGINLFRVLMTYLKPVMPELAAR 501 >gi|149926203|ref|ZP_01914465.1| methionyl-tRNA synthetase [Limnobacter sp. MED105] gi|149825021|gb|EDM84233.1| methionyl-tRNA synthetase [Limnobacter sp. MED105] Length = 691 Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 142/516 (27%), Positives = 235/516 (45%), Gaps = 47/516 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N H+GH E I D+ RF ++ +V + D HG + AQ Sbjct: 4 RILVTSALPYANGAIHLGHLVEYIQTDIWVRFQKMQSNEVYYVCADDTHGTPVMLRAQAE 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + + + ++ + RD A + +D++ T + C ++ ++ D G I Sbjct: 64 GISPEELIARVSTEHQRDFAS-FHVGFDNYYSTNAPENKAHCETIYTRLRDAGLIQTRSV 122 Query: 125 SGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM------------- 160 +Y E + D E K GA QY A + P + Sbjct: 123 EQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTELKNAYSTVSGAAPVR 182 Query: 161 -EEEGYFFRLS--AYQDKLLSYYESHPEFILPIERR-NEVISFVKSG-LKDLSLSRKTFD 215 + YFF+LS ++ L + +S + R+ E + SG L D +SR Sbjct: 183 KSSDHYFFKLSDPRCENFLRQWTQSEGRLQVEASRKMQEWLGEEGSGKLADWDISRDAPY 242 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILR 269 +G +IPD P YVW+DA Y + L G +F AD +H IGKDIL Sbjct: 243 FGFEIPDAPGKYFYVWLDAPVGYFASFQNLCERIGVDYQEFLKADTNTEMIHFIGKDILY 302 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328 FHA++WPA L A L P KV +HGF+ G K+SKS G I I++ + + LRY+ Sbjct: 303 FHALFWPAMLQFAGLRTPTKVNAHGFLTVDGAKMSKSRGTFITAESFIQQGLNPEWLRYY 362 Query: 329 LVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ + +D RVN+DL N+ SRS ++K+++G + + Sbjct: 363 FAAKLNSTMEDLDLSFSDFTARVNSDLVGKYINIASRSAGFLVKNFEGRVLD----SAMQ 418 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-- 445 +L+ I + + +A+ +V++ +V+ Y D +KPWEL K NPD+ + Sbjct: 419 HPLLADIRAQAAAIAAHYDEREYGKAIREVMACADKVNAYVDQEKPWELAK-NPDKQAEL 477 Query: 446 -TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 T + +E R L + L+ +P LA +IL VA Sbjct: 478 QTACSICLEAFRLLTLYLKPVLPVLAGNAENILGVA 513 >gi|228988288|ref|ZP_04148383.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771460|gb|EEM19931.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 544 Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 134/540 (24%), Positives = 245/540 (45%), Gaps = 54/540 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ + E+ + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKTAVENAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G +FW + +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGKDDQEFWDKEAKIYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 +I WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SIIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + + Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIDVELKDKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALEAIFDAVRFANKYFDERQPWKQREDDPVLCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V +I A LL+ F+P + ++ + L + N +P L D + P F Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVKRN---------WEPQHTLPSRIDSVQPLF 524 >gi|183222652|ref|YP_001840648.1| methionyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912685|ref|YP_001964240.1| methionyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|226710908|sp|B0SHA8|SYM_LEPBA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|226710909|sp|B0SQX5|SYM_LEPBP RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|167777361|gb|ABZ95662.1| Methionine--tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781074|gb|ABZ99372.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 681 Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 130/520 (25%), Positives = 235/520 (45%), Gaps = 41/520 (7%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + +++A+ Y N H+GH E + D+ RF +L G + F D HG I AA+ AG Sbjct: 5 ILVTSALPYANGSIHLGHILEAVQTDIWVRFQKLIGNECYFFCADDTHGTPIMIAAKKAG 64 Query: 67 VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 T + +++ +++D+ + YD++ T + + ++ + G I Sbjct: 65 KTPESMIEEVQKEHYKDLTS-FGVEYDNYYTTNSEENKKFSESIYLTLKKNGHIVARNIE 123 Query: 126 GWYSLRDEAYYNDDEVYK-----GADGQYYNAQH---------------------NPVQW 159 Y D+ + D + GA QY ++ PV Sbjct: 124 QSYCEHDKMFLPDRFIKGTCPKCGAKDQYGDSCEVCGTSYSPKDLKDSYCSICGTTPV-L 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E + FF+L +Q++L ++ E +++ + + SGL++ +SR +G Sbjct: 183 RESKHLFFKLQDFQNQLKNWMEEGNRLNEGAQKK--LQEWFTSGLQEWDISRDGPYFGFA 240 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275 IP++ YVW+DA Y+ ++ + +FW +H IGKDIL FH ++W Sbjct: 241 IPEEENKYFYVWLDAPIGYMASSLNHLKDERKFNEFWKEGKGEIVHFIGKDILYFHGLFW 300 Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 PA L+ + P ++ HGF+ GEK+SKS G I+ + + V+ R++L + Sbjct: 301 PAMLMGSGYKAPSQLNVHGFLTVNGEKMSKSRGTFINASTFAKYLDVEHFRFYLACRLGS 360 Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 G +D D RVN+DL + NLVSR + IL D M G + +S++S Sbjct: 361 GMEDVDISFDDFVSRVNSDLIGNLVNLVSRVSTSIL---DKMDRKLGILSTEGKSLVSEL 417 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 EIRE ++ + + + L +V++Y + PW L KT+ ++A V+ ++ Sbjct: 418 LSKETEIREAYVSRNYSKVMRDITGLGDKVNKYVNDYAPWNLIKTDVEKAREVVTTSLNC 477 Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494 + L L PK+ + + D+ + N F +L + ++ Sbjct: 478 AKILFTYLAPVTPKIVHSLADLFQIP--NLSFLNLTETIE 515 >gi|228955300|ref|ZP_04117308.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804433|gb|EEM51044.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 544 Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 128/511 (25%), Positives = 236/511 (46%), Gaps = 41/511 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K D+ F+ L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y + D E +G +A +P+ +E++ + ++ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182 Query: 177 LSYYESHPEFILPIERRNEVIS---------------FVKSGLKDLSLSRKTFDWGIKIP 221 +Y + F I+R E+ +VK GL D ++SR G+ IP Sbjct: 183 EHFYFALHTFQQQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLIDRAVSRD-LPIGVPIP 241 Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFHAI 273 +D + +YVWI+A+T Y + + + G +FW ++ +V GKD + FH++ Sbjct: 242 VEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFHSV 299 Query: 274 YWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 300 IWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVN 359 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 +D + N++L GN V+R++ I K Y G++ E + + Sbjct: 360 APENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVTKGSIEVELKDKVEG 419 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + RV + I + AL + V ++YFD ++PW+ ++ +P +Y V Sbjct: 420 LYKRVGEAIEQTK----FKVALETIFDTVRFANKYFDEKQPWKQREDDPVSCEETIYNCV 475 Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +I A LL+ F+P + ++ + L + + N Sbjct: 476 YLIANFAHLLEPFLPFSSERVRNTLSIVNRN 506 >gi|47567080|ref|ZP_00237797.1| methionyl-tRNA synthetase [Bacillus cereus G9241] gi|47570323|ref|ZP_00240969.1| methionyl-tRNA synthetase [Bacillus cereus G9241] gi|47553008|gb|EAL11413.1| methionyl-tRNA synthetase [Bacillus cereus G9241] gi|47556398|gb|EAL14732.1| methionyl-tRNA synthetase [Bacillus cereus G9241] Length = 544 Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 134/540 (24%), Positives = 245/540 (45%), Gaps = 54/540 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ + F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHKEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G +FW + +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGEDDQEFWDKEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 +I WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SIIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + + Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIDVELKDKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKQREDDPVLCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V +I A LL+ F+P + ++ + L + + N +P L D + P F Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524 >gi|209695662|ref|YP_002263591.1| methionyl-tRNA synthetase [Aliivibrio salmonicida LFI1238] gi|226710892|sp|B6EIY5|SYM_ALISL RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|208009614|emb|CAQ79910.1| methionyl-tRNA synthetase [Aliivibrio salmonicida LFI1238] Length = 686 Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 131/504 (25%), Positives = 217/504 (43%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E I AD+ R+ RL G D+ F D HG I AQ Sbjct: 7 KILVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNDINFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + ++ ++ G I S Sbjct: 67 GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASSIYLELKKNGFITSRTIS 126 Query: 126 GWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM-------------- 160 + E + D E G + ++P + Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKSEEQYGDNCDNCGETYSPTDLINPKSAVSGATPVMK 186 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + E +FF L ++ L + S L E N++ + +SGL+ +SR +G +I Sbjct: 187 DSEHFFFDLPQFESMLKEWTRSGS---LQTETANKMQEWFESGLQQWDISRDAPYFGFEI 243 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273 P + YVW+DA Y+ + L + D ++W + H IGKDI+ FH++ Sbjct: 244 PGETNKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWKLNSTTELYHFIGKDIVYFHSL 303 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L A P VF HG++ G K+SKS G I + + + LRY+ ++ Sbjct: 304 FWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLNHLDPECLRYYYAAKL 363 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + + +RVN+D+ N I NL SR+ I K +DG + E ++ Sbjct: 364 NSRIDDIDLNLEDFTQRVNSDVVNKIVNLASRNAGFITKRFDGKLSDNFVAPELYNEFVA 423 Query: 393 VCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448 R+ L E RE RA+ ++ +L + ++Y D + PW L K V Sbjct: 424 ASDRIAELYETRE------FSRAIREITALADKANQYIDEKAPWVLAKEEGKEQELQEVA 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P+LA + Sbjct: 478 SVGINLFRVLMAYLKPVMPELAAR 501 >gi|313793399|gb|EFS41457.1| methionyl-tRNA synthetase [Propionibacterium acnes HL110PA1] gi|313810333|gb|EFS48049.1| methionyl-tRNA synthetase [Propionibacterium acnes HL083PA1] gi|313814707|gb|EFS52421.1| methionyl-tRNA synthetase [Propionibacterium acnes HL059PA1] gi|313838090|gb|EFS75804.1| methionyl-tRNA synthetase [Propionibacterium acnes HL086PA1] gi|314914475|gb|EFS78306.1| methionyl-tRNA synthetase [Propionibacterium acnes HL005PA4] gi|314917799|gb|EFS81630.1| methionyl-tRNA synthetase [Propionibacterium acnes HL050PA1] gi|314957045|gb|EFT01151.1| methionyl-tRNA synthetase [Propionibacterium acnes HL027PA1] gi|314957660|gb|EFT01763.1| methionyl-tRNA synthetase [Propionibacterium acnes HL002PA1] gi|314972967|gb|EFT17063.1| methionyl-tRNA synthetase [Propionibacterium acnes HL053PA1] gi|314975484|gb|EFT19579.1| methionyl-tRNA synthetase [Propionibacterium acnes HL045PA1] gi|314986026|gb|EFT30118.1| methionyl-tRNA synthetase [Propionibacterium acnes HL005PA2] gi|314988809|gb|EFT32900.1| methionyl-tRNA synthetase [Propionibacterium acnes HL005PA3] gi|315086970|gb|EFT58946.1| methionyl-tRNA synthetase [Propionibacterium acnes HL002PA3] gi|315089895|gb|EFT61871.1| methionyl-tRNA synthetase [Propionibacterium acnes HL072PA1] gi|327325339|gb|EGE67144.1| methionine--tRNA ligase [Propionibacterium acnes HL096PA2] gi|327443770|gb|EGE90424.1| methionyl-tRNA synthetase [Propionibacterium acnes HL043PA1] gi|327449166|gb|EGE95820.1| methionyl-tRNA synthetase [Propionibacterium acnes HL043PA2] gi|327451348|gb|EGE98002.1| methionyl-tRNA synthetase [Propionibacterium acnes HL087PA3] gi|328755046|gb|EGF68662.1| methionyl-tRNA synthetase [Propionibacterium acnes HL025PA2] gi|328755907|gb|EGF69523.1| methionyl-tRNA synthetase [Propionibacterium acnes HL020PA1] gi|328761055|gb|EGF74606.1| methionine--tRNA ligase [Propionibacterium acnes HL099PA1] Length = 554 Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 134/496 (27%), Positives = 224/496 (45%), Gaps = 70/496 (14%) Query: 40 LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99 + G VL +G+D HG I+ A GVT + ++ R L +SYD + T Sbjct: 1 MSGHRVLMVSGSDCHGTAISVKADQEGVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLT 60 Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWY------SLRDE--------AYYNDDEVYKGA 145 H D + ++ ++ + G + K G + +L D Y+D +G Sbjct: 61 DNHADVTQEIFTRLHENGYVVKRSEMGAFEPSTGRTLPDRYIEGTCPVCGYDD---ARGD 117 Query: 146 DGQYYNAQHNPV--------------QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191 Q +P ++ E E +F L A + L S+ ++ ++ Sbjct: 118 QCDNCGRQLDPADLIDPRSKTTGAAPEFRETEHFFLDLPALAESLASWIDTRTDW----- 172 Query: 192 RRNEVISFVKSGLKDLSLSRKT--FDWGIKIP-----DDPQYIMYVWIDALTNYLTTT-- 242 R V+ F + L++L T DWGI++P D+P +YVW DA+ YL+ + Sbjct: 173 -RPNVLKFSHNLLEELRPRAITRDLDWGIRVPVEGWQDNPMKSIYVWFDAVIGYLSASIE 231 Query: 243 --GYLDNPDGSKAKFW----PADLHVIGKDILRFHAIYWPAFLLSAN------------- 283 + PD + +FW + +GKD + FH++ WP LL N Sbjct: 232 WARRIGRPDAWR-EFWNDEDARSYYFMGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEEL 290 Query: 284 --LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341 L LP ++ S F+ G K+S S G I + + E G DALRYF+ +D + Sbjct: 291 GTLNLPTEIVSSEFLTMSGSKVSNSRGATIFVGDFLHEFGPDALRYFIAVAGPENQDTDF 350 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 + +RVN +LAN GNLV+RS+SM K+ IP G T++D +L + + Sbjct: 351 TWEEFVRRVNFELANEWGNLVNRSISMAFKNCH-EIPAAGELTDADRELLDAAATGFDTV 409 Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461 + + A+ + + +V + Y A++PW+LK NP+R TVL+V ++V+ + + Sbjct: 410 GGLLAHARFKAAITEAMRIVGLANAYISAEEPWKLKD-NPERRDTVLHVALQVVSDVNTM 468 Query: 462 LQAFVPKLANKIFDIL 477 + F+P A KI++ L Sbjct: 469 MTPFMPHSAQKIYEAL 484 >gi|229153227|ref|ZP_04281406.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1550] gi|228630326|gb|EEK86976.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1550] Length = 544 Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 129/513 (25%), Positives = 237/513 (46%), Gaps = 45/513 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F+ L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPYCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E E R N + +VK GL+D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKKVVEIAKE--KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVS 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271 IP +D + +YVWI+A+ Y + + + G +FW +D +V GKD + FH Sbjct: 240 IPVKGYEDKK--IYVWIEAVAGYYSASKHWAEETGKDDQEFWNSDAQTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + + Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V +I A LL+ F+P + ++ L + N Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRSTLSIVKRN 506 >gi|229187283|ref|ZP_04314428.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1] gi|228596293|gb|EEK53968.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1] Length = 544 Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 135/540 (25%), Positives = 246/540 (45%), Gaps = 54/540 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL---HVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G + FW ++ +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDREFWDSEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ + N++L GN V+R++ I K Y G++P E + I Sbjct: 358 VNAPENRNTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 R+ + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V +I A LL+ F+P + +I + L + + N +P L D + P F Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPTRIDSVKPLF 524 >gi|294141350|ref|YP_003557328.1| methionyl-tRNA synthetase [Shewanella violacea DSS12] gi|293327819|dbj|BAJ02550.1| methionyl-tRNA synthetase [Shewanella violacea DSS12] Length = 694 Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 133/506 (26%), Positives = 228/506 (45%), Gaps = 45/506 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ ARF ++ G + + D HG I AQ Sbjct: 5 QRKILVTSALPYANGPIHLGHMLEYIQTDIWARFQKMRGHECHYICADDAHGTPIMLKAQ 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + Q ++ R +I +D+F T + + ++ K+ D G I Sbjct: 65 QLGIEPEEMIAQVNKEHRQDFTDFNIQFDNFHSTHSVENRELASEIYLKLRDAGYIETRT 124 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM----------- 160 S + +++ + D KG ++ QY A +NP + Sbjct: 125 ISQLFD-PEKSMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYNPTDMINPKSAVSGATP 183 Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + E +FF L A++ L + S L E N++ + + GLK +SR +G Sbjct: 184 IMKDSEHFFFDLPAFEGMLKEWTRSGA---LQDEVANKLNEWFEQGLKQWDISRDAPYFG 240 Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILRF 270 +IPD P YVW+DA Y+ + L + D + FW D H IGKDI+ F Sbjct: 241 FEIPDAPGKYFYVWLDAPIGYMGSFKNLCDRREDLNFDDFWAKDSTAEIYHFIGKDIINF 300 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L A P V++HG++ G K+SKS G I ++ + + LRY+ Sbjct: 301 HSLFWPAMLEGAGYRKPTHVYAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYYA 360 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVN+DL + NL SR+ I K +DG + T E Sbjct: 361 AKLSHRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKVADTTL--EQ 418 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447 + V+ E+ E + +A+ ++++L + Y PW+L K + A V Sbjct: 419 VFLSKQEVIAELYEGRE---FGKAMREIMALADLANAYVADAAPWQLIKQEDKQEEAHQV 475 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + R L L+ +PKLA+ + Sbjct: 476 CSNALNLFRILVTYLKPVLPKLADDV 501 >gi|148361194|ref|YP_001252401.1| methionyl tRNA synthetase [Legionella pneumophila str. Corby] gi|187647732|sp|A5II55|SYM_LEGPC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|148282967|gb|ABQ57055.1| methionyl tRNA synthetase [Legionella pneumophila str. Corby] Length = 670 Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 144/551 (26%), Positives = 240/551 (43%), Gaps = 61/551 (11%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M K+ +++A+ Y N H+GH E I D+ R H++ G+ + G D HG I Sbjct: 1 MTSERKMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIML 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + + + I YD + T + +++++ GDI Sbjct: 61 KAEQLGITPEALTAEIKLSHEKDFKAFAIDYDYYHTTHSPENQALATTIFERLQAGGDIV 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQW---------- 159 K +Y + + D V G + + A ++P Sbjct: 121 KKTIRQFYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSVISGA 180 Query: 160 ----MEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 ME E YFF L Y++ L + + H L E N++ + ++GLK +SR Sbjct: 181 SPVEMESEHYFFDLPRYEELLKDWTRKGH----LQTEVTNKLSEWFEAGLKQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268 +G IP P YVW+DA Y+ + Y D S +FW H +GKDI+ Sbjct: 237 YFGFPIPGVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKASKTELYHFVGKDIV 296 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FHA++WPA L ++ P V++HGF+ +G+K+SKS G I+ + + + LRY+ Sbjct: 297 YFHALFWPAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEYLRYY 356 Query: 329 LVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 ++ G+ D + D RVNADL + N+ SR I K +D + S Sbjct: 357 FAAKLN-GRVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRL--------S 407 Query: 387 DESILSVCSRVLQEIRENMQNQLIH----RALAQVISLVSEVDRYFDAQKPWELKK--TN 440 E I L RE + + + RA+ Q++ +V++Y DA KPW L K + Sbjct: 408 SELINQKLYNDLLSAREFVIDAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESK 467 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500 + + + + + R L L+ +P +A + F+ E + S+D+ L + H Sbjct: 468 LNEVHAICTMGINLFRILITYLKPVLPMMAKASEE--FLNSEPLHWGSIDKPL----LNH 521 Query: 501 K--TFDPIFPR 509 + TF P+ R Sbjct: 522 RINTFKPLMVR 532 >gi|313828253|gb|EFS65967.1| methionyl-tRNA synthetase [Propionibacterium acnes HL063PA2] Length = 554 Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 134/496 (27%), Positives = 224/496 (45%), Gaps = 70/496 (14%) Query: 40 LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99 + G VL +G+D HG I+ A GVT + ++ R L +SYD + T Sbjct: 1 MSGHRVLMVSGSDCHGTAISVKADQEGVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLT 60 Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWY------SLRDE--------AYYNDDEVYKGA 145 H D + ++ ++ + G + K G + +L D Y+D +G Sbjct: 61 DNHADVTQEIFTRLHENGYVVKRSEMGAFEPSTGRTLPDRYIEGTCPVCGYDD---ARGD 117 Query: 146 DGQYYNAQHNPV--------------QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191 Q +P ++ E E +F L A + L S+ ++ ++ Sbjct: 118 QCDNCGRQLDPADLIDPRSKTTGAAPEFRETEHFFLDLPALAESLASWIDTRTDW----- 172 Query: 192 RRNEVISFVKSGLKDLSLSRKT--FDWGIKIP-----DDPQYIMYVWIDALTNYLTTT-- 242 R V+ F + L++L T DWGI++P D+P +YVW DA+ YL+ + Sbjct: 173 -RPNVLKFSHNLLEELRPRAITRDLDWGIRVPVEGWQDNPMKSIYVWFDAVIGYLSASIE 231 Query: 243 --GYLDNPDGSKAKFW----PADLHVIGKDILRFHAIYWPAFLLSAN------------- 283 + PD + +FW + +GKD + FH++ WP LL N Sbjct: 232 WARRIGRPDAWR-EFWNDEDARSYYFMGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEEL 290 Query: 284 --LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341 L LP ++ S F+ G K+S S G I + + E G DALRYF+ +D + Sbjct: 291 GTLNLPTEIVSSEFLTMSGSKVSNSRGATIFVGDFLHEFGPDALRYFIAVAGPENQDTDF 350 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 + +RVN +LAN GNLV+RS+SM K+ IP G T++D +L + + Sbjct: 351 TWEEFVRRVNFELANEWGNLVNRSISMAFKNCH-EIPAAGELTDADRELLDAAATGFDTV 409 Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461 + + A+ + + +V + Y A++PW+LK NP+R TVL+V ++V+ + + Sbjct: 410 GGLLAHARFKAAITEAMRIVGLANAYISAEEPWKLKD-NPERRDTVLHVALQVVSDVNTM 468 Query: 462 LQAFVPKLANKIFDIL 477 + F+P A KI++ L Sbjct: 469 MTPFMPHSAQKIYEAL 484 >gi|269102243|ref|ZP_06154940.1| methionyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP 102761] gi|268162141|gb|EEZ40637.1| methionyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP 102761] Length = 682 Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 133/505 (26%), Positives = 223/505 (44%), Gaps = 48/505 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E + AD+ R+ RL G +V F D HG I AQ Sbjct: 7 KILVTCALPYANGSIHLGHMLEHVQADIWVRYQRLRGNEVHFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ + + + S+ + DI + ++ T + + ++ ++ +G I S Sbjct: 67 GMEPEQMIAEVSKEHQADFAGFDIDFSNYHSTHSPENRELASFVYNQLKQQGYITSRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYK-----GADGQYYNAQHN---------------------PVQW 159 + E + D V GA+ QY + N PV Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCGAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPVM- 185 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + E +FF L ++ L + +S L E N++ + +SGL+ +SR +G + Sbjct: 186 KDSEHFFFDLPQFESMLKEWTKSG---ALQDETANKMQEWFESGLQQWDISRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272 IP + YVW+DA Y+ + L + D +FW D H IGKDI+ FH+ Sbjct: 243 IPGETGKYFYVWLDAPIGYMGSFKNLCDKRDDLDFDEFWNKDSSTELYHFIGKDIVYFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L A P VF HG++ G K+SKS G I ++ + + LRY+ + Sbjct: 303 LFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLQHLDPECLRYYYAAK 362 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + D + + +RVN+D+ N I NL SR+ I K +DG + A E + Sbjct: 363 LNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFIAKRFDGKLAERCAEPELYAEFV 422 Query: 392 SVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTV 447 + R+ L E RE RA+ ++ +L + ++Y D + PW + K + Sbjct: 423 AAADRIGALYESRE------YGRAIREITALADKANQYVDEKAPWVVAKEEGKDLELQEI 476 Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472 + + + R L L+ +PKLA + Sbjct: 477 CSMGINLFRVLMAYLKPVMPKLAER 501 >gi|90407939|ref|ZP_01216113.1| methionyl-tRNA synthetase [Psychromonas sp. CNPT3] gi|90310953|gb|EAS39064.1| methionyl-tRNA synthetase [Psychromonas sp. CNPT3] Length = 680 Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 137/512 (26%), Positives = 231/512 (45%), Gaps = 52/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E + AD+ RF RL G +V F D HG I A Sbjct: 7 KILVTCALPYANGPIHLGHMLEHVQADIWVRFQRLRGNNVSFICADDAHGTPIMLKANAM 66 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + +D D DIS+D++ T + + ++ + G I Sbjct: 67 GITPEQMISEIKALHIKDFND-FDISFDNYHSTHSEENKTLSTHIYNTLHKNGFIKTKTI 125 Query: 125 SGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM------------- 160 + E + D E G + A ++P + + Sbjct: 126 EQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDSCGATYSPTEMINPKSAVSGATPIM 185 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E +FF L ++D L ++ S L IE N+V + + GLK ++R +G + Sbjct: 186 KETEHFFFDLPQFEDMLKTWTRSGA---LQIEMANKVAEWFEFGLKQWDITRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILRFHA 272 IP+ P YVW+DA Y+ + L + D ++W + H IGKDI+ FH+ Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDRRDDLDFDEYWNKNSSTELYHFIGKDIVNFHS 302 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P V HG++ G K+SKS G I +E + + LRY+ + Sbjct: 303 LFWPAVLEGSGFRKPTAVHVHGYVTVNGAKMSKSKGTFIKASTYLEHLDPECLRYYYAAK 362 Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG----MIPTPGAFTESD 387 + D + D +RVN+D+ N + NL SR+ I K Y+G I P + E Sbjct: 363 LTSKIDDLDLNLDDFMQRVNSDVVNKLVNLASRTAGFIAKKYNGELSVKIAEPALYQEFI 422 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPD-RAS 445 ++ S+ S L E RE RA+ ++++L + ++Y D + PW L K+ + D Sbjct: 423 DAGESIAS--LFEKRE------FARAIREIMALADKANKYIDEKAPWALAKEADKDIEVQ 474 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + + + R L L+ +PKL + + L Sbjct: 475 EICSMGINLFRVLMTYLKPVMPKLTARSEEFL 506 >gi|189460088|ref|ZP_03008873.1| hypothetical protein BACCOP_00724 [Bacteroides coprocola DSM 17136] gi|189433249|gb|EDV02234.1| hypothetical protein BACCOP_00724 [Bacteroides coprocola DSM 17136] Length = 680 Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 142/512 (27%), Positives = 243/512 (47%), Gaps = 41/512 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GVT + VD+ RD IS+D + RT+ K HHDT ++K+ DK + Sbjct: 63 RAKKEGVTPQDIVDRYHTLIRDSFKEFGISFDVYGRTSSKIHHDTASDFFRKLYDKNEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG-----ADGQY------YNAQHNPVQWM--------- 160 + +Y + D + A+G Y + +P + + Sbjct: 123 EKTSMQYYDEEAHTFLADRYITGECPRCHAEGAYGDQCEKCGSTLSPTELINPKSAISGS 182 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + ++ L ++ L + E H E+ + + S++ GL+ ++SR Sbjct: 183 QPVMKETKHWYLPLDKHESWLRQWILEDHKEWRPNV--YGQCKSWLDMGLQPRAVSRD-L 239 Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDIL 268 DWGI +P + ++YVW DA Y++ T L PD S K+W +H IGKD + Sbjct: 240 DWGIPVPVEGADGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLIHFIGKDNI 297 Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDAL 325 FH I +PA L + + LP V ++ F+ +G+KIS S + E +++ D L Sbjct: 298 VFHCIVFPAMLKAEGSYILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVL 357 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 RY L KD + + R N +L GN V+R++ + K +DG +P G + Sbjct: 358 RYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTNKYFDGKVPACGELND 417 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 D L + V E+ + + A + ++L ++Y +PW+L KT+ +R + Sbjct: 418 YDRDTLKEFADVKAEVEKLLNVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMNRVA 477 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 T+L ++++++ LAI + F+P + K+ +L Sbjct: 478 TILNISLQLVANLAIAFEPFLPFSSEKLRHML 509 >gi|255506604|ref|ZP_05382243.1| methionyl-tRNA synthetase [Chlamydia trachomatis D(s)2923] Length = 550 Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 137/514 (26%), Positives = 236/514 (45%), Gaps = 48/514 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 E ++ I++A+ Y N H GH AY + ADV ARF RL G +VL+ G+DE+G I Sbjct: 2 ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ AG+ + +VD + +D L IS D F RTT H + ++ + ++G + Sbjct: 60 LNAELAGMGYQEYVDMYHKLHKDTLKKLGISVDFFSRTTNAYHPAIVQDFYQNLQERGLV 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155 YS + + D V +G + Q A + Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTG 179 Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + + E + L ++ LL++ + L RN V +++ L+ +++R Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLAFVQG---IYLRPHMRNFVTDYIEH-LRPRAVTRD-L 234 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGKD 266 WGI +PD + YVW DA Y++ T + NP+ K KFW D IGKD Sbjct: 235 SWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGNPEAWK-KFWLDDTVTYAQFIGKD 293 Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324 FHA+ +PA + +LP K + + F+L +G + SKS GN ID +E +D Sbjct: 294 NTSFHAVIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNSIDMDAFLETYSLDK 353 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L D + K R N++L GN V+R ++ +K+ + +P Sbjct: 354 LRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-QLE 412 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDR 443 + D +S ++ ++ E+ + +A + ++ L + + YF+ + PW+L K+ N +R Sbjct: 413 QKDLDFISKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNR 472 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +L+ + LA++ +P+ A KI +++ Sbjct: 473 VRAILFCACYCQKLLALISYPIMPETALKILEMI 506 >gi|329765323|ref|ZP_08256903.1| methionyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138229|gb|EGG42485.1| methionyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 551 Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 137/505 (27%), Positives = 241/505 (47%), Gaps = 41/505 (8%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K I++A+ Y N + H+GH A + ADV RF +L G++ + +D+ G I ++ Sbjct: 4 KAIITSALPYANGEIHLGHVASTYLPADVTTRFLKLKGVEAYYFCASDDFGTPILIQSEK 63 Query: 65 AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G T +V N R++ D I +D F +T+ + + ++KK+++ G IY+ Sbjct: 64 EGKTPSEYVAHWNKRDYDDFT-AFGIDFDFFYKTSSSENIAFVQDVFKKLNNAGHIYEKE 122 Query: 124 YSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEE---------------- 162 +Y D+ + D V Y A QY + + + EE Sbjct: 123 IIQFYCKNDQKFLPDRYVKGVCPYCNASDQYSDLCESCGRVPEEISDPKCSICGQTPTKE 182 Query: 163 --EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 +FF+L + D L + + + L + + V +++KSGL D ++R WG+ + Sbjct: 183 KTTHFFFKLKNFGDALYKWLDENEN--LQKDVKKYVQNWIKSGLIDWDITRD-ISWGVPV 239 Query: 221 PDD--PQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFW-PADL-HVIGKDILRFHAIYW 275 P D + Y W D Y++T +LDN + +FW AD+ H IGKDI+ H ++ Sbjct: 240 PVDNAKDKVFYGWFDNHLAYISTALKFLDNKGINGKEFWNSADIYHFIGKDIVYHHFLFL 299 Query: 276 PAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 PA L N LP + + G + + +KISKS I + +E D LRY+L+ Sbjct: 300 PAMRLGINSEYKLPDFIPTRGHLTLQSKKISKSRNWYIGLKQFLEYYPADYLRYYLIAIN 359 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 +D +D D R+N++L +GN V+R++ K +DG+IP + + D + Sbjct: 360 PYSQDDLNFDWDEFTNRINSELIGNLGNFVNRALGFTKKAFDGIIPETEPYDKKDIEAET 419 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + E+ M+ + RAL +++ S ++YF ++PW K P + V +++V Sbjct: 420 KIKNLAGELNLLMEQNHLDRALKKIMEFSSYFNQYFQHKEPW---KKGPGTTNCV-FLSV 475 Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477 R +AI + F+P+ + KI++ L Sbjct: 476 NAARSMAIAIFPFIPESSQKIWEQL 500 >gi|289525077|emb|CBJ14547.1| methionyl-tRNA synthetase [Chlamydia trachomatis Sweden2] gi|296434617|gb|ADH16795.1| methionyl-tRNA synthetase [Chlamydia trachomatis E/150] Length = 550 Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 137/514 (26%), Positives = 236/514 (45%), Gaps = 48/514 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 E ++ I++A+ Y N H GH AY + ADV ARF RL G +VL+ G+DE+G I Sbjct: 2 ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ AG+ + +VD + +D L IS D F RTT H + ++ + ++G + Sbjct: 60 LNAELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNAYHPAIVQDFYRNLQERGLV 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155 YS + + D V +G + Q A + Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTG 179 Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + + E + L ++ LL++ + L RN V +++ L+ +++R Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLAFVQG---IYLRPHMRNFVTDYIEH-LRPRAVTRD-L 234 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGKD 266 WGI +PD + YVW DA Y++ T + NP+ K KFW D IGKD Sbjct: 235 SWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGNPEAWK-KFWLDDTVTYAQFIGKD 293 Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324 FHA+ +PA + +LP K + + F+L +G + SKS GN ID +E +D Sbjct: 294 NTSFHAVIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNSIDMDAFLETYSLDK 353 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L D + K R N++L GN V+R ++ +K+ + +P Sbjct: 354 LRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-QLE 412 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDR 443 + D +S ++ ++ E+ + +A + ++ L + + YF+ + PW+L K+ N +R Sbjct: 413 QKDLDFISKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNR 472 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +L+ + LA++ +P+ A KI +++ Sbjct: 473 VRAILFCACYCQKLLALISYPIMPETALKILEMI 506 >gi|167624305|ref|YP_001674599.1| methionyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] gi|189083264|sp|B0TJ05|SYM_SHEHH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|167354327|gb|ABZ76940.1| methionyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] Length = 679 Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 142/541 (26%), Positives = 239/541 (44%), Gaps = 61/541 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ +RF +L G + + D HG I AQ Sbjct: 5 QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLKAQ 64 Query: 64 NAGVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + + Q + +D AD +I +D+F T + + ++ K+ D G I Sbjct: 65 QMGIAPEEMIAQVQKEHEKDFAD-FNIQFDNFHSTHSDENRELASQVYIKLRDAGYIKTK 123 Query: 123 CYSGWYS------------------LRDEAYYNDDEVYKGA--------DGQYYNAQHNP 156 S + + E Y D+ GA D + + P Sbjct: 124 TISQLFDPEKSMFLPDRFVKGTCPRCKSEDQYGDNCDNCGATYSTTDLIDPRSAVSGATP 183 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 V + E +FF L A++ L + S L E N++ + + GL+ +SR + Sbjct: 184 VM-KDSEHFFFDLPAFEGMLKEWINSGS---LQQEMANKLGEWFEQGLQQWDISRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILR 269 G +IPD P YVW+DA Y+ + L N D + +FW D H IGKDI+ Sbjct: 240 GFEIPDAPGKFFYVWLDAPIGYMGSFKNLCNKRDDLNFDEFWSKDSTAEVYHFIGKDIVY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH+++WPA L A L P V++HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 FHSLFWPAMLEGAGLRKPTSVYAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYY 359 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +RVN+DL + NL SR+ I K + G + + + Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFGGKL------AKIAD 413 Query: 389 SILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445 + L+ QEI N + + +A+ ++++L + Y PW+L K + A Sbjct: 414 TSLTTSFLAKQEIIANFYETREYGKAMREIMALADIANAYVADSAPWQLIKEEDKQEEAH 473 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI------------FDILFVADENRCFQSLDQRL 493 V + + R L L+ +PKLA + DI E F++L QR+ Sbjct: 474 QVCSNALNLFRILVTYLKPVLPKLAQDVEAFLQMELTWDNLDIDLAGHEIAKFKALMQRV 533 Query: 494 K 494 + Sbjct: 534 E 534 >gi|320159818|ref|YP_004173042.1| methionyl-tRNA synthetase [Anaerolinea thermophila UNI-1] gi|319993671|dbj|BAJ62442.1| methionyl-tRNA synthetase [Anaerolinea thermophila UNI-1] Length = 598 Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 136/516 (26%), Positives = 223/516 (43%), Gaps = 54/516 (10%) Query: 9 ISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 I+ A Y NA+ H+G+ AY + AD++AR+HRL G VL +GTD HG + A Sbjct: 7 IAVAWPYANAEIHVGNITGAY--LPADIVARYHRLKGNRVLMVSGTDSHGTPVTLRADAE 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G + + ++F D+ ++YD F T + H + ++ + G +Y Sbjct: 65 GKPVEEVYKRFHQSFLDLFQKAGLTYDLFTTTHTENHFKVAQSVFLALLKNGYLYTEVRP 124 Query: 126 GWYSLRDEAY----YNDDEVYKGADGQYYNAQH-------------NP--------VQWM 160 WYS + Y + Y D + Q NP + Sbjct: 125 QWYSPSLRRFLPDRYIEGTCYICGDEHARSDQCDKCGNVLEPEKLINPRSKVDGSTPELR 184 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E Y+ LS + ++ + + + GLK ++R DWGI + Sbjct: 185 ETVHYYLDLSKLEPEVARFLRERQHYWRETVCNQTLGQIESEGLKSRPITRD-LDWGIPV 243 Query: 221 PDD--PQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW----PADLHVIGKDILRFH 271 P + +YVW +A+ YL+ L + +W ++ IGKD + FH Sbjct: 244 PVEGWEGKCLYVWFEAVIGYLSAPIEWARLHGLGDAWKDWWVNPESRTIYFIGKDNIFFH 303 Query: 272 AIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 A +WPA LL L LP V ++ F+ +G+KIS S + + + Sbjct: 304 AAWWPAQLLGMGETFMEIFAGEKGQKLVLPYDVPANQFMNLEGDKISGSRNWAVWGHDFL 363 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 D LRY+L + +D +D + KR N +L GNL +R +S +K ++G + Sbjct: 364 SRYDPDPLRYYLTVNMPEMRDTDWDWEDFYKRNNDELVATWGNLANRVLSFAVKHFEGKV 423 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P PGA TE DE IL + + ++ + AL ++L +EV+RY D PW+ Sbjct: 424 PEPGALTELDEEILRKVESGFESVGAELEAVHLRSALGSAMALATEVNRYLDQTAPWKEI 483 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 KT+ A+ +Y + I L++LL F+P + K+ Sbjct: 484 KTDRQAAARAIYTALRCIDNLSVLLSPFLPFSSEKL 519 >gi|90417029|ref|ZP_01224958.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2207] gi|90331376|gb|EAS46620.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2207] Length = 673 Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 127/505 (25%), Positives = 233/505 (46%), Gaps = 45/505 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + ++ ++ A+ Y NA H+GH E DV RF R+ G + + + D HG I Sbjct: 1 MSSKRQILVTNALPYANAALHLGHVLEYTQTDVWVRFQRMRGHECYYLSADDAHGTAIML 60 Query: 61 AAQNAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A G++ + + D + + D D L IS D++ T + + + +++ +++ G I Sbjct: 61 KADEKGISAEQHIADMRAIHEADFKDFL-ISVDNYHTTHSEENREFSELIYNRLNANGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160 K + + + D + KG A+ QY A ++P+ + Sbjct: 120 AKREITQAFDPEKNLFLADRYI-KGTCPKCKAEDQYGDNCEACGATYSPIDLINPVSAIS 178 Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 E YFF+L + L + S + E N++ ++ SGL++ +SR Sbjct: 179 GATPIEKESTHYFFKLPEFTQFLQDWTRSGA---VQDEVANKLGEWLDSGLQEWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDI 267 +G +IPD P YVW+DA Y+ + L + +G +W AD H IGKDI Sbjct: 236 PYFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCDREGMDFDHYWKADSTTELYHFIGKDI 295 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L SA P K+ HGF+ G+K+SKS G I+ ++ + D LRY Sbjct: 296 VNFHALFWPAMLSSAEFRTPTKICVHGFVTVNGKKMSKSRGTFINARCYLDHLDPDYLRY 355 Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + +++ +D + + +++VN+DL + N+ SR I DG++ Sbjct: 356 YYASKLSGSVEDIDLNLEDFQQKVNSDLVGKVVNIASRCAKFIANGNDGVLSN----NID 411 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRA 444 + + + S + I ++ +N+ +A+ ++++ + Y A++PW+L K + Sbjct: 412 NPELWAQVSGAAETIAQHYENRDFSKAIREIMAQADAANEYIAAKEPWKLNKQEGMQQQV 471 Query: 445 STVLYVTVEVIRQLAILLQAFVPKL 469 + + + R L L+ VP + Sbjct: 472 QDICSQGINMFRVLMTYLKPVVPAM 496 >gi|260779289|ref|ZP_05888181.1| methionyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260605453|gb|EEX31748.1| methionyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 712 Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 132/503 (26%), Positives = 222/503 (44%), Gaps = 44/503 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 33 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 92 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + + ++ ++ G I S Sbjct: 93 GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASRIYLELKKNGFISSRTIS 152 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWME------------ 161 + E + D V KG ++ QY + N P + ++ Sbjct: 153 QLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVM 211 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E +FF L ++ L + S L E N++ + +SGL+ +SR +G + Sbjct: 212 KDSEHFFFDLPQFESMLQEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFGFE 268 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272 IP + YVW+DA Y+ + L + D ++W D H IGKDI+ FH+ Sbjct: 269 IPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWKKDSTTELYHFIGKDIVYFHS 328 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L + P VF HG++ G K+SKS G I + + + LRY+ + Sbjct: 329 LFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAATYLNHLDPECLRYYYAAK 388 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + D + + +RVNAD+ N I NL SR+ I K ++G + + E + Sbjct: 389 LNSRIDDLDLNLEDFIQRVNADVVNKIVNLASRNAGFITKRFEGKLSSEFVEPELYNEFV 448 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLY 449 + R I E + + RA+ ++ +L + ++Y D + PW + K + Sbjct: 449 AAADR----IAELFETREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDICS 504 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P+LA + Sbjct: 505 VGINLFRVLMTYLKPVMPELAAR 527 >gi|254881246|ref|ZP_05253956.1| methionyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA] gi|294777663|ref|ZP_06743114.1| methionine--tRNA ligase [Bacteroides vulgatus PC510] gi|254834039|gb|EET14348.1| methionyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA] gi|294448731|gb|EFG17280.1| methionine--tRNA ligase [Bacteroides vulgatus PC510] Length = 680 Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 143/510 (28%), Positives = 240/510 (47%), Gaps = 51/510 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I A+ G+ Sbjct: 10 VTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGI 69 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + VD+ ++ IS+D + RTT K HH+ +K + DKG+ + + Sbjct: 70 TPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKGEFIEKTSMQY 129 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQHNPVQWME 161 Y + D + + A+G Y + + PV E Sbjct: 130 YDEEAHQFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGSKPVM-RE 188 Query: 162 EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLSRKTFDWG 217 + ++ L ++ L + E+H E+ R N + S++ GL+ ++SR DWG Sbjct: 189 TKHWYLPLDKHEGWLREWILENHKEW-----RPNVYGQCKSWLDMGLQPRAVSRD-LDWG 242 Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270 I +P + ++YVW DA Y++ T L PD + W D +H IGKD + F Sbjct: 243 IPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFIGKDNIVF 299 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327 H I +PA L + + LP V S+ F+ +G+KIS S + E +++ D LRY Sbjct: 300 HCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLRY 359 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L KD + + R N +L GN V+R++ + K +DG +P G T+ D Sbjct: 360 VLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPVCGELTDYD 419 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 + L + V E+ + + A + ++L ++Y +PW+L KT+ DR +T+ Sbjct: 420 KETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMDRVATI 479 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L + ++++ LAI + F+P + K+ +L Sbjct: 480 LNIALQLVANLAIAFEPFLPFSSEKLRQML 509 >gi|317478291|ref|ZP_07937456.1| tRNA synthetase class I [Bacteroides sp. 4_1_36] gi|316905598|gb|EFV27387.1| tRNA synthetase class I [Bacteroides sp. 4_1_36] Length = 695 Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 140/516 (27%), Positives = 247/516 (47%), Gaps = 49/516 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL +V+F G+DEHG I Sbjct: 18 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKENVIFIGGSDEHGVPITI 77 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + +S+D + RTT K HHDT ++K+ DKG+ Sbjct: 78 RAKKEGITPQDVVDRYHTLIKKSFEEFGVSFDVYSRTTSKTHHDTASDFFRKLYDKGEFI 137 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + A+G Y + + Sbjct: 138 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 197 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210 PV E + ++ L +++ L + E H E+ R N + S++ GL+ ++S Sbjct: 198 QPVM-RETKHWYLPLDKHEEWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 251 Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIG 264 R DWGI +P + ++YVW DA Y++ T L PD + K+W +H IG Sbjct: 252 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-TWEKWWKDPETRLVHFIG 308 Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--G 321 KD + FH I +PA L + + LP V S+ F+ +G+KIS S + E + + Sbjct: 309 KDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLVDFPGK 368 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D LRY L KD + + R N +L GN V+R++ + K +D ++P G Sbjct: 369 QDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDSVVPAAG 428 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 + D L + V E+ + + A + ++L ++Y +PW+L KT+ Sbjct: 429 ELNDYDRETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDM 488 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +R +T+L+++++++ LAI + F+P + K+ +L Sbjct: 489 ERVATILHISLQLVANLAIAFEPFLPFSSEKLRKML 524 >gi|127512502|ref|YP_001093699.1| methionyl-tRNA synthetase [Shewanella loihica PV-4] gi|187647772|sp|A3QD92|SYM_SHELP RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|126637797|gb|ABO23440.1| methionyl-tRNA synthetase [Shewanella loihica PV-4] Length = 673 Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 131/506 (25%), Positives = 223/506 (44%), Gaps = 45/506 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ ARF +L G + + D HG I AQ Sbjct: 5 QRKILVTSALPYANGPIHLGHMLEYIQTDIWARFQKLRGHECHYICADDAHGTPIMLKAQ 64 Query: 64 NAGVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + + + Q + +D AD +I +D+F T + + ++ K+ D G I Sbjct: 65 QLSMAPEEMIAQVQKEHQQDFAD-FNIQFDNFHSTHSDENRELASEIYLKLRDGGYIKSK 123 Query: 123 CYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM----------- 160 S + + D V G + A ++P + Sbjct: 124 TISQLFDPEKSMFLPDRFVKGTCPKCKSVDQYGDNCDSCGATYSPTDLIDPKSAVSGATP 183 Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 E E +FF L A++D L + S L E N++ + + GL+ ++R +G Sbjct: 184 VMKETEHFFFDLPAFEDMLKEWTRSGS---LQQEMANKLGEWFEQGLQQWDITRDAPYFG 240 Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILRF 270 +IPD P YVW+DA Y+ + L N D + +FW D H IGKDI+ F Sbjct: 241 FEIPDAPGKFFYVWLDAPIGYMGSFKNLCNKRSDLNFDEFWAKDSTAEVYHFIGKDIVYF 300 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L A P V++HG++ G K+SKS G I ++ + + LRY+ Sbjct: 301 HSLFWPAMLEGAGFRKPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDNLNPEYLRYYYA 360 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +RVN+DL + NL SR+ I K +DG + +D S Sbjct: 361 AKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLAKV-----ADAS 415 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447 + I E + + +A+ ++++L + + PW+L K + A V Sbjct: 416 LTETFLAKADAIAEFYETREFGKAMREIMALADIANAFVADAAPWQLVKEEDKQEEAHQV 475 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473 + + R L L+ +PKLA + Sbjct: 476 CSNALNLFRILVTYLKPVLPKLAQDV 501 >gi|150003455|ref|YP_001298199.1| methionyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482] gi|187646706|sp|A6KYR3|SYM_BACV8 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|149931879|gb|ABR38577.1| Methionyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482] Length = 680 Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 143/510 (28%), Positives = 240/510 (47%), Gaps = 51/510 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I A+ G+ Sbjct: 10 VTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGI 69 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + VD+ ++ IS+D + RTT K HH+ +K + DKG+ + + Sbjct: 70 TPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKGEFIEKTSMQY 129 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQHNPVQWME 161 Y + D + + A+G Y + + PV E Sbjct: 130 YDEEAHQFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGSKPVM-RE 188 Query: 162 EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLSRKTFDWG 217 + ++ L ++ L + E+H E+ R N + S++ GL+ ++SR DWG Sbjct: 189 TKHWYLPLDKHEGWLREWILENHKEW-----RPNVYGQCKSWLDMGLQPRAVSRD-LDWG 242 Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270 I +P + ++YVW DA Y++ T L PD + W D +H IGKD + F Sbjct: 243 IPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFIGKDNIVF 299 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327 H I +PA L + + LP V S+ F+ +G+KIS S + E +++ D LRY Sbjct: 300 HCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLRY 359 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L KD + + R N +L GN V+R++ + K +DG +P G T+ D Sbjct: 360 VLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPVCGELTDYD 419 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 + L + V E+ + + A + ++L ++Y +PW+L KT+ DR +T+ Sbjct: 420 KETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMDRVATI 479 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L + ++++ LAI + F+P + K+ +L Sbjct: 480 LNIALQLVANLAIAFEPFLPFSSEKLRKML 509 >gi|84497814|ref|ZP_00996611.1| methionyl-tRNA synthetase [Janibacter sp. HTCC2649] gi|84381314|gb|EAP97197.1| methionyl-tRNA synthetase [Janibacter sp. HTCC2649] Length = 601 Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 140/522 (26%), Positives = 235/522 (45%), Gaps = 61/522 (11%) Query: 9 ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 I +A+A+P N H+GH + +DV +R+ R+ G DVL +G+DEHG I A Sbjct: 4 ILSAVAWPYANGPRHLGHVAGFGVPSDVFSRYMRMAGHDVLMVSGSDEHGTPILVLADQQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT + VD+N + L +YD + RTT H+ + L+K++ G + + Sbjct: 64 GVTPQELVDKNHAIIANELADLGCAYDLYTRTTTTNHYSVAQELFKQVHTNGYMIEQTTR 123 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQ-----------------WM 160 G S D + Y A G + N ++ ++ Sbjct: 124 GAISPSTGRTLPDRYIEGTCPICGYTEARGDQCDNCGNQLEPTDLIDPKSKINGETPEFI 183 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218 E + +F L A L + E R VI F + L+++ T DWGI Sbjct: 184 ETQHFFLDLPALAVALREWLEGREASGT---WRPNVIKFSLNILEEIRPRAMTRDIDWGI 240 Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGKD 266 +P D +YVW DA+ YL+ + G ++ W D + +GKD Sbjct: 241 PVPLEGWEDQSAKRLYVWFDAVIGYLSASVEWARRQGDPERWREWWNDPEALSYYFMGKD 300 Query: 267 ILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVID 312 + FH+ WPA LL+ L LP +V S ++ +G++ S S G+VI Sbjct: 301 NITFHSQIWPAELLAYAGRGDKGGEPGTFGVLGLPTEVVSSEYLTMEGKQFSSSRGHVIY 360 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 +V+E G D +RYF+ +D + +R N++L G GNLV+R+ +MI K Sbjct: 361 IRDVLERYGPDPIRYFICAAGPENQDSNFTWAEFVQRNNSELVAGWGNLVNRTGAMIAKS 420 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 + G IP PG DE++ + + + + Q I A+ + + V +V++Y + Sbjct: 421 F-GEIPQPGPLEPVDEAVRAATLAAFDTVGDLLAKQRIKAAVNEAMRAVGDVNKYVTDTE 479 Query: 433 PWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 P++LK + +R +TVL+ ++ + L +L F+P +N++ Sbjct: 480 PFKLKGDDQRERLATVLHTLIQCVSDLNTILAPFLPHASNRV 521 >gi|15618046|ref|NP_224330.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae CWL029] gi|4376385|gb|AAD18275.1| Methionyl-tRNA Synthetase [Chlamydophila pneumoniae CWL029] Length = 551 Score = 172 bits (437), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 138/519 (26%), Positives = 236/519 (45%), Gaps = 44/519 (8%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +K+ I++A+ Y N H GH A + ADV ARF RL G DVL+ G+DE G I A Sbjct: 3 QKVLITSALPYANGPLHFGHIAGVYLPADVYARFRRLLGDDVLYICGSDEFGIAITLNAD 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + +VD + +D + L + D F RTT H + + + ++ G I Sbjct: 63 REGLGYQEYVDMYHKLHKDTFEKLGFALDFFSRTTNPFHAELVQDFYSQLKASGLIENRI 122 Query: 124 YSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------ 160 YS +++ + D V +G + Q A + + + Sbjct: 123 SEQLYSEQEQRFLADRYVEGTCPRCGFDHARGDECQSCGADYEAIDLIGPKSKISGVELV 182 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +F L +D LLS+ + LP R V+ +++ ++ +++R WGI Sbjct: 183 KKETEHSYFLLDRMKDALLSFIQG---CYLPDHVRKFVVDYIEH-VRSRAITRD-LSWGI 237 Query: 219 KIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIGKDILRF 270 +PD P + YVW DA Y++ T NPD K +FW D + IGKD L F Sbjct: 238 PVPDFPGKVFYVWFDAPIGYISGTMEWAASQGNPDEWK-RFWLEDGVEYVQFIGKDNLPF 296 Query: 271 HAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 H++ +PA L L K + F L +G + SKS GN +D + + +D LRY Sbjct: 297 HSVVFPAMELGQKLDYKKVDALVVSEFYLLEGRQFSKSEGNYVDMDKFLSSYSLDKLRYV 356 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESD 387 L D + K R N++L GN ++R ++ K+ YD + +SD Sbjct: 357 LAATAPETSDSEFTFLDFKTRCNSELVGKFGNFINRVLAFAEKNHYDKLSYHSVVLEDSD 416 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPDRAST 446 + L +++++ + + + +A + ++SL + + YF+ Q PW+ LK+ +R Sbjct: 417 RAFLEEARQLVRDAEKCYREYSLRKATSVIMSLAALGNVYFNQQAPWKLLKEGTRERVEA 476 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 +L+ + LA++ +P+ A I++++ C Sbjct: 477 ILFCACYCQKLLALISYPIIPESAVAIWEMISPKSLENC 515 >gi|163787073|ref|ZP_02181520.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Flavobacteriales bacterium ALC-1] gi|159876961|gb|EDP71018.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Flavobacteriales bacterium ALC-1] Length = 682 Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 140/513 (27%), Positives = 240/513 (46%), Gaps = 53/513 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I+ A+ Y N HIGH A + +D+ AR+ RL G DV F G+DEHG I A+ GV Sbjct: 7 ITAALPYTNGPIHIGHLAGVYVPSDIYARYLRLTGNDVAFICGSDEHGVPITIKAKKEGV 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + VD+ + + I++D++ RT+ K HHDT + +K + +K + + Sbjct: 67 TPQDIVDKYHAIIKKSFEDFGITFDNYSRTSAKIHHDTAQEFFKTLYNKNEFIEEVTEQL 126 Query: 128 YSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWM--------------E 161 Y + D +E Y G + HN + E Sbjct: 127 YDAEANQFLADRFIVGTCPKCGYEESY-GDQCENCGTSHNATDLINPKSAITGNVPTLKE 185 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRN-------EVISFVKSGLKDLSLSRKTF 214 + +F L+ ++D L E+IL +++ +V S+V GL+ +++R Sbjct: 186 TKHWFLPLNKHEDFLR-------EWILKGHKKDWKPNVYGQVKSWVDDGLRPRAVTRD-L 237 Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDI 267 WGI +P + ++YVW DA Y++ T +G + +W + +H IGKD Sbjct: 238 GWGIPVPVEGGEGKVLYVWFDAPIGYISATKEWAAREGKNWEDYWKDEKTKLVHFIGKDN 297 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIE-EVGVDA 324 + FH I +P+ L + + LP V ++ F+ +G+K+S S V P +I+ D Sbjct: 298 IVFHCIIFPSMLKAEGSYILPDNVPANEFLNLEGKKLSTSKNWAVWLPDYLIDFPNQQDV 357 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N +L GN ++R V + K YDG++P+P +T Sbjct: 358 LRYALTANAPESKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKYYDGVVPSPSNYT 417 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 DE L+ I +++ A ++++L ++Y ++PW+ KT+ R Sbjct: 418 AIDEETLATVKAYPAVISSSIERYRFREASQELMNLARLGNKYLADEEPWKTIKTDEGRT 477 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 TV++V +++ LA+L + F+P + K+ IL Sbjct: 478 KTVMFVALQIASALAVLSEPFLPFTSVKLKGIL 510 >gi|332112154|gb|EGJ12130.1| methionyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2] Length = 694 Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 148/523 (28%), Positives = 231/523 (44%), Gaps = 54/523 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL+++TA+ Y N HIGH E I AD+ R R+ G +V F D HG I AA+ A Sbjct: 13 KLFVTTALPYANGPFHIGHVMEYIQADIWVRLQRMRGAEVRFVCADDAHGAPIMIAAEKA 72 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T + FV + + D I +D++ T +H+ + ++ + I Sbjct: 73 GKTPQQFVADIAAGRKQYLDGFHIQFDNWHSTDGPENHELAQSIYLALKANDLIEVRTIE 132 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161 ++ D+ + D KG A QY + NP + Sbjct: 133 QFFD-PDKGMFLPDRFIKGECPKCGAKDQYGDNCEVCGAVYAPTDLKNPYSALSGATPVL 191 Query: 162 --EEGYFFRLSAYQDKLLSYYES-------HPEFILPIERRNEVISFVKSGLKDLSLSRK 212 E +FF+LS + + Y ES PE + + L D +SR Sbjct: 192 RTSEHFFFKLS--DPRCVEYLESWTQDGRLQPEVANKVREWFTRDEAGQVSLGDWDISRD 249 Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTT--TGYLDNPDGSKAKFWPA--------DLHV 262 +GI+IP P YVW+DA YL + ++ N G A + A +H Sbjct: 250 APYFGIEIPGAPGKYFYVWLDAPVGYLASLKNWFVKNVPGDAAAAFDAYLAQPELEQVHF 309 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 IGKDI+ FH ++WPA L + P +V+ HG + GEK+SKS G I P+ + E+G+ Sbjct: 310 IGKDIVTFHTLFWPAMLKFSGRKTPDRVYVHGHLTVSGEKMSKSRGTGISPLRYL-ELGL 368 Query: 323 DA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 DA LRY++ ++ A +D ++ + RVNADL N+ SR+ + K + G + T Sbjct: 369 DAEWLRYYIAAKLNARVEDLDFNPEDFVARVNADLVGKYVNIASRAAGFLAKRFGGRL-T 427 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 E ++L + E+ + + +AL +V+ L V+ Y D KPWEL K Sbjct: 428 ADVGVEG-RALLDGLRAHAGVVLEHYETREYGKALREVMLLADRVNEYVDQNKPWELAKQ 486 Query: 440 NPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 A V V +E R L + L+ +P A ++ L +A Sbjct: 487 QGAEARLHDVCTVCIEAFRLLTLYLKPVLPATAARVEAFLGIA 529 >gi|161723239|ref|YP_096876.2| methionyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|68565969|sp|Q5ZRJ9|SYM_LEGPH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS Length = 670 Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 140/551 (25%), Positives = 247/551 (44%), Gaps = 61/551 (11%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M K+ +++A+ Y N H+GH E I D+ R H++ G+ + G D HG I Sbjct: 1 MTSERKMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIML 60 Query: 61 AAQNAGVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116 A+ G+T + + + ++F+ A I YD + T + +++++ Sbjct: 61 KAEQLGITPEALTAEIKLSHEKDFKAFA----IDYDYYHTTHSPENQALATTIFERLQAG 116 Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM----- 160 GDI K +Y + + D V G + + A ++P + Sbjct: 117 GDIVKKTIRQFYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSV 176 Query: 161 ---------EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLS 210 E E YFF L Y++ L + + H L E N++ + ++GLK +S Sbjct: 177 ISGVSPVEKESEHYFFDLPRYEELLKDWTRKGH----LQTEVTNKLSEWFEAGLKQWDIS 232 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIG 264 R +G IP P YVW+DA Y+ + Y D S +FW H +G Sbjct: 233 RDAPYFGFPIPGVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKASKTELYHFVG 292 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324 KDI+ FHA++WPA L ++ P V++HGF+ +G+K+SKS G I+ + + + Sbjct: 293 KDIVYFHALFWPAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEY 352 Query: 325 LRYFLVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ ++ G+ D + D RVNADL + N+ SR I K +D + + Sbjct: 353 LRYYFAAKLN-GRVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRLSS--- 408 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TN 440 +D+ + + + + + ++ RA+ Q++ +V++Y DA KPW L K + Sbjct: 409 -ELNDQKLYNDLLSARESVIDAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESK 467 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500 + + + + + R L L+ +P +A + F+ E + S+D+ L + H Sbjct: 468 LNEVHAICTMGINLFRILITYLKPVLPMMAKASEE--FLNSEPLHWDSIDKPL----LNH 521 Query: 501 K--TFDPIFPR 509 + TF P+ R Sbjct: 522 RINTFKPLMVR 532 >gi|33241458|ref|NP_876399.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae TW-183] gi|33235966|gb|AAP98056.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae TW-183] gi|269303003|gb|ACZ33103.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN] Length = 551 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 138/519 (26%), Positives = 236/519 (45%), Gaps = 44/519 (8%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +K+ I++A+ Y N H GH A + ADV ARF RL G DVL+ G+DE G I A Sbjct: 3 QKVLITSALPYANGPLHFGHIAGVYLPADVYARFRRLLGDDVLYICGSDEFGIAITLNAD 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + +VD + +D + L + D F RTT H + + + ++ G I Sbjct: 63 REGLGYQEYVDMYHKLHKDTFEKLGFALDFFSRTTNPFHAELVQDFYSQLKASGLIENRI 122 Query: 124 YSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------ 160 YS +++ + D V +G + Q A + + + Sbjct: 123 SEQLYSEQEQRFLADRYVEGTCPRCGFDHARGDECQSCGADYEAIDLIDPKSKISGVELV 182 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +F L +D LLS+ + LP R V+ +++ ++ +++R WGI Sbjct: 183 KKETEHSYFLLDRMKDALLSFIQG---CYLPDHVRKFVVDYIEH-VRSRAITRD-LSWGI 237 Query: 219 KIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIGKDILRF 270 +PD P + YVW DA Y++ T NPD K +FW D + IGKD L F Sbjct: 238 PVPDFPGKVFYVWFDAPIGYISGTMEWAASQGNPDEWK-RFWLEDGVEYVQFIGKDNLPF 296 Query: 271 HAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 H++ +PA L L K + F L +G + SKS GN +D + + +D LRY Sbjct: 297 HSVVFPAMELGQKLDYKKVDALVVSEFYLLEGRQFSKSEGNYVDMDKFLSSYSLDKLRYV 356 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESD 387 L D + K R N++L GN ++R ++ K+ YD + +SD Sbjct: 357 LAATAPETSDSEFTFLDFKTRCNSELVGKFGNFINRVLAFAEKNHYDKLSYHSVVLEDSD 416 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPDRAST 446 + L +++++ + + + +A + ++SL + + YF+ Q PW+ LK+ +R Sbjct: 417 RAFLEEARQLVRDAEKCYREYSLRKATSVIMSLAALGNVYFNQQAPWKLLKEGTRERVEA 476 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 +L+ + LA++ +P+ A I++++ C Sbjct: 477 ILFCACYCQKLLALISYPIIPESAVAIWEMISPKSLENC 515 >gi|229496222|ref|ZP_04389942.1| methionyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406] gi|229316800|gb|EEN82713.1| methionyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406] Length = 730 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 140/539 (25%), Positives = 247/539 (45%), Gaps = 43/539 (7%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K ++ ++TA+ Y N HIGH A + AD+ R+ R+ G +VLF G+DEHG I+ Sbjct: 53 KRFKRTLVTTALPYANGPVHIGHLAGVYVPADIYVRYKRMRGEEVLFIGGSDEHGVPISL 112 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ ++ + I +D + RT+ + H +T ++ + D Sbjct: 113 KAKAEGITPQQVVDRYHTLIKESFEQFGIDFDIYSRTSSRVHAETASQFFRTLYDNHKFI 172 Query: 121 KGCYSGWYSLRDEAYYNDDEVY--------KGADGQYYNAQHNPV--------------- 157 + +Y + EA+ D + GA G + + Sbjct: 173 ERTSEQYYDPKAEAFLADRYIVGTCPHCHKPGAYGDQCESCGTSLNATDLIDPQSTISGA 232 Query: 158 --QWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + E ++ L Y+D L + + H E+ + + S++ GL+ ++SR Sbjct: 233 KPELRETTHWYLPLDRYEDWLREWILDGHKEWKSNV--YGQCKSWIDMGLQPRAVSRD-L 289 Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267 DWGI +P + ++YVW DA Y++ T L P+ + W D +H IGKD Sbjct: 290 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPETWET--WWKDSETRLIHFIGKDN 346 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324 + FH I +PA L + + LP V ++ F+ +G+KIS S + E ++E D Sbjct: 347 IVFHCIVFPAMLKAEGSYILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLQEFPGKEDV 406 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N +L GN V+R+V + K ++G +P G T Sbjct: 407 LRYVLTANAPETKDNDFTWRDFQARNNNELVAIYGNFVNRAVVLTHKYFEGKVPEMGTLT 466 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 E D++ L + ++ + ++ AL + + ++Y +PW++ KT+ R Sbjct: 467 EYDQATLQEVADLVPHLERHLDEFHFRDALRDAMQIARIGNKYLADTEPWKVAKTDLSRV 526 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503 +T+L+V +++ L+I F+P ++ D+L VA + L PG L + F Sbjct: 527 ATILHVALQISANLSIAFAPFLPFSTRRLLDLLRVAPFDWSSLGRADLLVPGHQLAEPF 585 >gi|218231128|ref|YP_002369842.1| methionyl-tRNA synthetase [Bacillus cereus B4264] gi|226695274|sp|B7HD62|SYM_BACC4 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|218159085|gb|ACK59077.1| putative methionyl-tRNA synthetase [Bacillus cereus B4264] Length = 544 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 129/513 (25%), Positives = 237/513 (46%), Gaps = 45/513 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F+ L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPYCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E E R N + +VK GL+D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKKVVEIVKE--KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVS 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271 IP +D + +YVWI+A+ Y + + + G +FW +D +V GKD + FH Sbjct: 240 IPVKGYEDKK--IYVWIEAVAGYYSASKHWAEETGKDDQEFWNSDAQTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + + Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V +I A LL+ F+P + ++ L + N Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRSTLSIIKRN 506 >gi|52630188|gb|AAU28929.1| methionyl tRNA synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 693 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 138/547 (25%), Positives = 242/547 (44%), Gaps = 53/547 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M K+ +++A+ Y N H+GH E I D+ R H++ G+ + G D HG I Sbjct: 24 MTSERKMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIML 83 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + + + I YD + T + +++++ GDI Sbjct: 84 KAEQLGITPEALTAEIKLSHEKDFKAFAIDYDYYHTTHSPENQALATTIFERLQAGGDIV 143 Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM--------- 160 K +Y + + D V G + + A ++P + Sbjct: 144 KKTIRQFYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSVISGV 203 Query: 161 -----EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E E YFF L Y++ L + + H L E N++ + ++GLK +SR Sbjct: 204 SPVEKESEHYFFDLPRYEELLKDWTRKGH----LQTEVTNKLSEWFEAGLKQWDISRDAP 259 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268 +G IP P YVW+DA Y+ + Y D S +FW H +GKDI+ Sbjct: 260 YFGFPIPGVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKASKTELYHFVGKDIV 319 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FHA++WPA L ++ P V++HGF+ +G+K+SKS G I+ + + + LRY+ Sbjct: 320 YFHALFWPAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEYLRYY 379 Query: 329 LVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 ++ G+ D + D RVNADL + N+ SR I K +D + + + Sbjct: 380 FAAKLN-GRVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRLSS----ELN 434 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444 D+ + + + + + ++ RA+ Q++ +V++Y DA KPW L K + + Sbjct: 435 DQKLYNDLLSARESVIDAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESKLNEV 494 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--T 502 + + + + R L L+ +P +A + F+ E + S+D+ L + H+ T Sbjct: 495 HAICTMGINLFRILITYLKPVLPMMAKASEE--FLNSEPLHWDSIDKPL----LNHRINT 548 Query: 503 FDPIFPR 509 F P+ R Sbjct: 549 FKPLMVR 555 >gi|330720454|gb|EGG98763.1| Methionyl-tRNA synthetase [gamma proteobacterium IMCC2047] Length = 711 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 137/543 (25%), Positives = 238/543 (43%), Gaps = 54/543 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ RF + G + D HG I A+ Sbjct: 29 KILVTSALPYANGPIHLGHMLEYIQTDIWVRFQKQRGETCTYVCADDAHGTAIMLRAEQM 88 Query: 66 GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + + + ++ D AD I +D++ T + + ++K D G I + Sbjct: 89 GISAEEQIKRVQQDHEADFAD-FHIGFDNYYTTHSPENKELSEFIYKACRDSGHIAERSI 147 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG-------- 164 + + + D KG A+ QY A +NP + + + Sbjct: 148 TQAFDPEKNLFLAD-RFIKGTCPRCKAEDQYGDNCEACGATYNPTELINPKSAISGATPV 206 Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 YFF+L +++ L + S L N++ ++++GL++ +SR +G Sbjct: 207 EKDSVHYFFKLPDFENMLKEWTRSG---TLQESVANKLNEWLEAGLQEWDISRDAPYFGF 263 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILRFH 271 +IPD P YVW+DA Y+ + L D +W D H IGKDI+ FH Sbjct: 264 EIPDAPGKYFYVWLDAPIGYIASFKNLCARRDDLDFDDYWAKDSDAEVYHFIGKDIINFH 323 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 A++WPA L A+ P V +HGF+ G+K+SKS G I + + + LRY+ Sbjct: 324 ALFWPAMLSCADFRTPTAVKAHGFVTVNGKKMSKSRGTFIQARTYLNHLNPEYLRYYFAA 383 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ G + + + +RVN+D+ + N+ SR I K +DG + T S+ ++ Sbjct: 384 KLGNGTEDIDLNLEDFVQRVNSDVVGKVVNIASRCAGFIKKRFDGKLSD----TVSNPAL 439 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVL 448 L +I E+ +N +A+ ++++ + ++Y D QKPW L K Sbjct: 440 LDEVIAAGDQIAEHFENLEFSKAVREIMAQADKANQYIDEQKPWVLAKEEGRDQDVQDAC 499 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK--PGFMLHKTFDPI 506 + + + R L L+ +P L L V N D RL+ G ++K F P+ Sbjct: 500 SMGIHLFRVLCTYLKPVLPALVANAETFLNVESLN-----WDDRLQTLTGHQINK-FKPL 553 Query: 507 FPR 509 R Sbjct: 554 MQR 556 >gi|54295707|ref|YP_128122.1| methionyl-tRNA synthetase [Legionella pneumophila str. Lens] gi|68565967|sp|Q5WST1|SYM_LEGPL RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|53755539|emb|CAH17038.1| methionyl-tRNA synthetase [Legionella pneumophila str. Lens] Length = 670 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 140/547 (25%), Positives = 241/547 (44%), Gaps = 53/547 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M K+ +++A+ Y N H+GH E I D+ R H++ G+ + G D HG I Sbjct: 1 MTSERKMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIML 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + + + I YD + T + +++++ GDI Sbjct: 61 KAEQLGITPEALTAEIKLSHEKDFKAFAIDYDYYHTTHSPENQALATTIFERLQAGGDIV 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM--------- 160 K +Y + + D V G + + A ++P + Sbjct: 121 KKTIRQFYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSVISGA 180 Query: 161 -----EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E E YFF L Y++ L + + H L E N++ + ++GLK +SR Sbjct: 181 SPVEKESEHYFFDLPRYEELLKDWTRKGH----LQTEVTNKLSEWFEAGLKQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268 +G IP P YVW+DA Y+ + Y D S +FW H +GKDI+ Sbjct: 237 YFGFPIPGVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKTSKTELYHFVGKDIV 296 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FHA++WPA L ++ P V++HGF+ +G+K+SKS G I+ + + + LRY+ Sbjct: 297 YFHALFWPAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEYLRYY 356 Query: 329 LVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 ++ G+ D + D RVNADL + N+ SR I K +D + + + Sbjct: 357 FAAKLN-GRVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRLSSELNDPKL 415 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444 +LS V+ + ++ RA+ Q++ +V++Y DA KPW L K + + Sbjct: 416 HNDLLSARESVI----DAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESKLNEV 471 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--T 502 + + + + R L L+ +P +A + F+ E + S+D+ L + H+ T Sbjct: 472 HAICTMGINLFRILITYLKPVLPMMAKASEE--FLNSEPLHWGSIDKPL----LNHRINT 525 Query: 503 FDPIFPR 509 F P+ R Sbjct: 526 FKPLMVR 532 >gi|167569200|ref|ZP_02362074.1| methionyl-tRNA synthetase [Burkholderia oklahomensis C6786] Length = 718 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 139/517 (26%), Positives = 226/517 (43%), Gaps = 47/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I DV R R+ G ++ + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDVWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT K +++ R + D +S+D+F T + ++ + D G I K Sbjct: 77 QEGVTPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKDAGFIAKRE 136 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161 Y E + D KG A QY ++ NP + Sbjct: 137 IEQAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPYSVVSGATP 195 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 196 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 253 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L G W H IGKDI Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGIDFDAWIKKDSTTEQYHFIGKDI 313 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ ++K +DG + + Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SA 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 + +L+ + +I + + + RAL Q + L EV+ Y D KPWEL K + A+ Sbjct: 430 MNHPLLATLRDAIPQIAAHYEAREYGRALRQTMELADEVNGYVDTAKPWELAKDPANAAA 489 Query: 446 --TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + VA Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAEGVEAFFGVA 526 >gi|15835658|ref|NP_300182.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae J138] gi|16752922|ref|NP_445193.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae AR39] gi|12644036|sp|Q9Z959|SYM_CHLPN RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|7189567|gb|AAF38466.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae AR39] gi|8978496|dbj|BAA98333.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae J138] Length = 551 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 138/519 (26%), Positives = 236/519 (45%), Gaps = 44/519 (8%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +K+ I++A+ Y N H GH A + ADV ARF RL G DVL+ G+DE G I A Sbjct: 3 QKVLITSALPYANGPLHFGHIAGVYLPADVYARFRRLLGDDVLYICGSDEFGIAITLNAD 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + +VD + +D + L + D F RTT H + + + ++ G I Sbjct: 63 REGLGYQEYVDMYHKLHKDTFEKLGFALDFFSRTTNPFHAELVQDFYSQLKASGLIENRI 122 Query: 124 YSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------ 160 YS +++ + D V +G + Q A + + + Sbjct: 123 SEQLYSEQEQRFLADRYVEGTCPRCGFDHARGDECQSCGADYEAIDLIDPKSKISGVELV 182 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +F L +D LLS+ + LP R V+ +++ ++ +++R WGI Sbjct: 183 KKETEHSYFLLDRMKDALLSFIQG---CYLPDHVRKFVVDYIEH-VRSRAITRD-LSWGI 237 Query: 219 KIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIGKDILRF 270 +PD P + YVW DA Y++ T NPD K +FW D + IGKD L F Sbjct: 238 PVPDFPGKVFYVWFDAPIGYISGTMEWAASQGNPDEWK-RFWLEDGVEYVQFIGKDNLPF 296 Query: 271 HAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 H++ +PA L L K + F L +G + SKS GN +D + + +D LRY Sbjct: 297 HSVVFPAMELGQKLDYKKVDALVVSEFYLLEGRQFSKSEGNYVDMDKFLSSYSLDKLRYV 356 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESD 387 L D + K R N++L GN ++R ++ K+ YD + +SD Sbjct: 357 LAATAPETSDSEFTFLDFKTRCNSELVGKFGNFINRVLAFAEKNHYDKLSYHSVVLEDSD 416 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPDRAST 446 + L +++++ + + + +A + ++SL + + YF+ Q PW+ LK+ +R Sbjct: 417 RAFLEEVRQLVRDAEKCYREYSLRKATSVIMSLAALGNVYFNQQAPWKLLKEGTRERVEA 476 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 +L+ + LA++ +P+ A I++++ C Sbjct: 477 ILFCACYCQKLLALISYPIIPESAVAIWEMISPKSLENC 515 >gi|11499048|ref|NP_070282.1| methionyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304] gi|3122911|sp|O28819|SYM_ARCFU RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|2649118|gb|AAB89796.1| methionyl-tRNA synthetase (metS) [Archaeoglobus fulgidus DSM 4304] Length = 658 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 126/509 (24%), Positives = 229/509 (44%), Gaps = 46/509 (9%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N + H+GH + ADV R+ R+ G +V+F G+D HG I A+ G++ Sbjct: 4 VTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGLS 63 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 K VD +F + D L+I +D + RT HH + K++ +KG +Y Y Sbjct: 64 PKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPKEIQLAY 123 Query: 129 SLRDEAYYND----------------DEVYKGADGQYYNAQ---------HNPVQWMEEE 163 + + + D DE +G + + ++ + Sbjct: 124 CPKCQRFLPDRYVEGICPYCGALARGDECDQGCGRHLEPGEIKEPRCKICGSKAEFRSQR 183 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS--LSRKTFDWGIKIP 221 YFF+L+ +QD L Y + ++ +++ ++ +K+L + +WG++ P Sbjct: 184 HYFFKLTEFQDFLEDY-------LSKLKGTENALNYARNWVKNLRDWCITRNLEWGVRFP 236 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW----PADLHVIGKDILRFHAIYWP 276 +P ++YVW+DA Y++ T G K W +H IG DI+ H I+WP Sbjct: 237 GEPNLVVYVWVDAPIGYISFTEKACEEKGCDWRKIWIDGDAEIIHFIGLDIVYHHCIFWP 296 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIA 334 A L A+ LP V + G + +G+ SKS G V+ E + G+ D LRY++V + Sbjct: 297 AMLKGADYALPSAVVASGMVKVEGKTFSKSRGYVVWVEEDYLKSGLSPDYLRYYIVNYTS 356 Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 KD + + +++VN ++ +GN + R + K++ G + G DE +L Sbjct: 357 HQKDLNFSWEVFREKVNNEVIATLGNFLYRVLLFAWKNF-GEVRMEGV----DEEVLEKI 411 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 Q+I ++ A + L + + YF KPWEL KT+ + A + +++ Sbjct: 412 RETEQKILSALEEWEFKAASDAFMELATYGNVYFQNAKPWELIKTDKEAARRAVASCLQL 471 Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN 483 + L I +P+ ++ + + EN Sbjct: 472 AKALIIFAYPVMPESMERMAKAIGLDLEN 500 >gi|228948767|ref|ZP_04111044.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810899|gb|EEM57243.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 544 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 134/540 (24%), Positives = 245/540 (45%), Gaps = 54/540 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ + E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKTAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL---HVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G + FW + +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWVEETGKDDREFWDGEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + + Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPNGSIDVELKDKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V +I A LL+ F+P + +I + L + + N +P L D + P F Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524 >gi|288929286|ref|ZP_06423131.1| methionine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108] gi|288329388|gb|EFC67974.1| methionine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108] Length = 687 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 151/539 (28%), Positives = 240/539 (44%), Gaps = 51/539 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ I+ A+ Y N HIGH A + AD+ AR+ RL DV+F G+DEHG I Sbjct: 10 KQYKRTTITAALPYANGGVHIGHLAGVYVPADIYARYMRLKNEDVVFIGGSDEHGVPITI 69 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GV+ + VD+ + + IS+D + RTT HH +KK+ + G + Sbjct: 70 RARKEGVSPQDVVDRFHAMIKKSFEDFGISFDIYSRTTSPTHHQLASDFFKKLYEDGKLL 129 Query: 121 KGCYSGWYS------------------LRDEAYYNDDEVYKGADGQYYNAQH-------- 154 + +Y +E Y D G D H Sbjct: 130 EKETEQYYDEEAHQFLADRYIMGECPHCHNEGAYGDQCEKCGRDLSPTELLHPRSTISGS 189 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 PV + + ++ L YQD L + E H E+ R V KS L DL L + Sbjct: 190 QPVL-KKTKNWYLPLDKYQDWLKEWILEGHKEW------RPNVYGQCKSWL-DLDLQPRA 241 Query: 214 ----FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVI 263 DWGI +P + ++YVW DA Y++ T L PD + K+W +H I Sbjct: 242 MTRDLDWGIPVPIEGAEGKVLYVWFDAPIGYISNTKEL-LPD-TWEKWWKDPETRLVHFI 299 Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320 GKD + FH I +P L + LP+ V ++ F+ + EKIS S + E +E+ Sbjct: 300 GKDNIVFHCIVFPVMLKAHGGYILPENVPANEFLNLEDEKISTSKNWAVWLHEYLEDFPG 359 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D LRY L KD + ++R N +L GN V+R++ + K + G +P Sbjct: 360 KQDVLRYVLTANAPETKDNNFTWKDFQERNNNELVAVYGNFVNRALQLTKKYFGGRVPAC 419 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 G E D+ L V +++ + A + + L +RY +PW++ KT+ Sbjct: 420 GELNEVDKQALDEFKDVKEKVEGLLDTYKFRDAQKEAMMLARIGNRYITECEPWKVWKTD 479 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499 P R T+LY++++++ LAI + F+P + K+ +L + + + LKPG L Sbjct: 480 PKRVETILYISLQLVANLAIAFEPFLPFSSAKLRSMLNMEGVDWNVLGNTEILKPGHQL 538 >gi|224824466|ref|ZP_03697573.1| methionyl-tRNA synthetase [Lutiella nitroferrum 2002] gi|224602959|gb|EEG09135.1| methionyl-tRNA synthetase [Lutiella nitroferrum 2002] Length = 702 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 156/540 (28%), Positives = 236/540 (43%), Gaps = 68/540 (12%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M K+ +++A+ Y N H+GH E I DV RF ++ G + D HG I Sbjct: 1 MTSPRKILVTSALPYANGAIHLGHMVEHIQTDVWVRFQKMRGHACHYVCADDTHGTPIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AA+ G+T + +++ + + D I YD++ T + +++ + G I Sbjct: 61 AAEKQGITPEQLIERVKAEHLADFTG-FHIGYDNYYSTNSPENKHFAEHIYRTLRANGKI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWM-------- 160 + + + D V GA QY A ++P Sbjct: 120 VSRTIEQLFDPEKQMFLPDRFVKGECPKCGAKDQYGDNCESCGATYSPTDLKNPYSAVSG 179 Query: 161 ------EEEGYFFRLSAYQDKLLSYY---------ESHPEFILPIERRNEVISFVKSGLK 205 E YFFRL D L ++ E+ P L E N++ +++ GL Sbjct: 180 ATPVLKSSEHYFFRLGDCADFLKAWTAGSSVRPDGETQPH--LQHESLNKMNEWIEGGLH 237 Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK--FWP---ADL 260 D +SR +G +IPD P YVW+DA Y+ + L G F P A+L Sbjct: 238 DWDISRDAPYFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCEKSGLDFDDYFGPDSDAEL 297 Query: 261 -HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 H IGKDIL FHA++WPA L + P VF+HGF+ G+K+SKS G I + + Sbjct: 298 YHFIGKDILYFHALFWPAMLKYSGYRAPTGVFAHGFLTVDGQKMSKSRGTFITAKSYL-D 356 Query: 320 VGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 G++ +RY++ ++ A +D D RVN+DL N+ SR+ I K + G Sbjct: 357 CGLNPEWMRYYVAAKLNARIEDIDLSLDDFVARVNSDLIGKFVNIASRAAGFITKRFGGR 416 Query: 377 IPTPGAFTESDESILS-VCSR------VLQEIRENMQN-------QLIHRALAQVISLVS 422 + A + S ++ S VC +LQ++ E+ + RAL V++L Sbjct: 417 L----AESVSSSALASPVCHAAQCEHPLLQQLAESSATLAAAYEAREYARALRDVMALAD 472 Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 EV+ Y D KPWEL K R V V V R LAI L+ +PKLA + L VA Sbjct: 473 EVNAYVDTNKPWELAKQEGMEARLHEVCTVLVNAFRLLAIYLKPVLPKLAADVEAFLNVA 532 >gi|91227376|ref|ZP_01261765.1| methionyl-tRNA synthetase [Vibrio alginolyticus 12G01] gi|91188640|gb|EAS74930.1| methionyl-tRNA synthetase [Vibrio alginolyticus 12G01] Length = 679 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 132/503 (26%), Positives = 219/503 (43%), Gaps = 46/503 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ G Sbjct: 1 MLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMG 60 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + + S + DIS+D++ T + + ++ ++ G I S Sbjct: 61 ITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFISSRTISQ 120 Query: 127 WYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM--------E 161 + E + D D+ D G+ Y+ NP + + Sbjct: 121 LFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMKD 180 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 E +FF L ++ L + S L E N++ + +SGL+ +SR +G +IP Sbjct: 181 SEHFFFDLPQFESMLKEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFGFEIP 237 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAIY 274 + YVW+DA Y+ + L + D ++W D H IGKDI+ FH+++ Sbjct: 238 GEKNKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWKKDSSAELYHFIGKDIVYFHSLF 297 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L + P VF HG++ G K+SKS G + +E + + LRY+ ++ Sbjct: 298 WPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYAAKLN 357 Query: 335 CGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + + +RVNAD+ N I NL SR+ I K ++G + A E ++ Sbjct: 358 SRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFVAA 417 Query: 394 CSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLY 449 R+ L E RE RA+ ++ +L + ++Y D + PW + K + Sbjct: 418 ADRIAELYETRE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDICS 471 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P LA + Sbjct: 472 VGINLFRVLMTYLKPVMPSLAAR 494 >gi|229087542|ref|ZP_04219674.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-44] gi|228695789|gb|EEL48642.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-44] Length = 544 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 131/525 (24%), Positives = 241/525 (45%), Gaps = 46/525 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHVASLLPGDILARYYRAKGEKVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K D F+ L +YD + RT + HH+T + ++ ++ ++ IYK Sbjct: 63 VTAKEIADHYHEEFQRCFQHLGFTYDCYTRTDTQHHHETVQKIFLRLLEEDFIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEPSRGDQCDACSAILDPLDLLEKKCKLCGNTPAVKET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L + +++ + + R N V +++ GL+D ++SR G+ Sbjct: 183 EHFYFALHKFHEQIKDAVATAKQ--KRTWRDNAVQLTERYLQEGLQDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPADL---HVIGKDILRFH 271 IP +D + +YVWI+A++ Y + + + + +FW + + +V GKD + FH Sbjct: 240 IPVKGYEDKK--IYVWIEAVSGYYSASKRWAEEAGKDDGEFWSSSVKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 +I WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K YDG +P + E + Sbjct: 358 TNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGAVPKGHVNLKLKEKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + S V I + AL + V ++YFD Q PW+ ++ +P +Y Sbjct: 418 EELYSSVGNAIEQAH----FKVALETIFETVRFANKYFDEQAPWKQREEDPAACEETIYT 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN-RCFQSLDQRLK 494 V I A LL+ F+P + ++ ++L + + +C +L +R+K Sbjct: 474 CVYFIVNFAQLLEPFLPFSSERVRNMLAITNAGWKCESALPERVK 518 >gi|34496661|ref|NP_900876.1| methionyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472] gi|68565993|sp|Q7NYR7|SYM_CHRVO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|34102516|gb|AAQ58881.1| methionyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472] Length = 689 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 160/558 (28%), Positives = 243/558 (43%), Gaps = 75/558 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y NA H+GH E I D+ RF ++ G + + D HG I AA+ Sbjct: 6 KRKILVTSALPYANAGLHLGHMLEQIQTDIWVRFQKMRGHECYYVCADDTHGAPIMLAAE 65 Query: 64 NAGVTTKVFVDQ----------------------NSRNFRDMAD--VLDISYDDFI--RT 97 G+T + V++ NS + +A+ L + DD I RT Sbjct: 66 KRGITPEQLVNEVRELHVADSQGFLIGHDNYYSTNSPENKALAEQVYLALKADDKIACRT 125 Query: 98 TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE---AYYNDDEV---YKGADGQYYN 151 E+ ++ KG+ K Y E A Y E+ Y G Sbjct: 126 IEQLFDPEKQMFLPDRFVKGECPKCSAKDQYGDNCEVCGATYAPTELKNPYSAVSGA--- 182 Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI-------LPIERRNEVISFVKSGL 204 PV E +FFRL D L ++ L E N++ ++ GL Sbjct: 183 ---KPVLKTSEH-FFFRLGECADFLKAWTSGASRRADGAVQPHLQPESLNKMNEWIGGGL 238 Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPAD 259 +D +SR +G +IP P YVW+DA Y+ + L N D AK + Sbjct: 239 QDWDISRDAPYFGFEIPGAPGKYFYVWLDAPIGYMASFKNLCERLNLNFDEWFAKDSQTE 298 Query: 260 L-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 + H IGKDIL FHA++WPA L + L P VF+HGF+ G+K+SKS G I + Sbjct: 299 MYHFIGKDILYFHALFWPAMLNYSGLRAPTGVFAHGFLTVDGQKMSKSRGTFIQAKSYL- 357 Query: 319 EVGVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 + G++ +RY++ ++ +D + + RVN+DL N+ SRS I K +DG Sbjct: 358 DCGLNPEWMRYYIAAKLNGRIEDIDLNLNDFVARVNSDLVGKFVNIASRSAGFIAKRFDG 417 Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 M+ A SD IL+ +E+ + + +AL V++L V+ Y DA KPWE Sbjct: 418 ML----AAQVSDGEILAKLQAAAEELAAAYEAREYAKALRDVMALADIVNGYVDANKPWE 473 Query: 436 LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI-------------FDILFVA 480 L K R V V V R LAI L+ +PKLA + + L + Sbjct: 474 LAKQEGQDARLQDVCTVLVNAFRLLAIYLKPVLPKLAEGVEAFLDVAPLSWHDAETLLLG 533 Query: 481 DENRCFQSLDQRLKPGFM 498 + +Q L QR+ P + Sbjct: 534 KKINAYQHLMQRIDPALI 551 >gi|330446439|ref|ZP_08310091.1| methionyl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490630|dbj|GAA04588.1| methionyl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 681 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 134/506 (26%), Positives = 224/506 (44%), Gaps = 50/506 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E + AD+ R+ RL G +V F D HG I AQ Sbjct: 7 KILVTCALPYANGSIHLGHMLEHVQADIWVRYQRLRGNEVHFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ + + + S+ + DI + ++ T + + ++ ++ +KG I S Sbjct: 67 GMEPEQMIAEVSKEHQADFAGFDIDFSNYHSTHSPENRELASFVYTQLKEKGFITSRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN---------------------PVQ 158 + E + D V KG A+ QY + N PV Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPVM 185 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + +S L E N++ + +SGL+ +SR +G Sbjct: 186 -KDSEHFFFDLPQFESMLKEWTKSG---ALQDETANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + G ++W D H IGKDI+ FH Sbjct: 242 EIPGETGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDEYWNKDSSTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L A P VF HG++ G K+SKS G I ++ + + LRY+ Sbjct: 302 SLFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLKHLDPECLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVN+D+ N I NL SR+ I K +DG + E Sbjct: 362 KLNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFIAKRFDGKLSDNFVEPELYAEF 421 Query: 391 LSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRAST 446 ++ R+ L E RE RA+ ++ +L + ++Y D + PW + K Sbjct: 422 VAAADRIGELYESRE------YGRAIREITALADKANQYVDEKAPWVVAKQEGKDQELQE 475 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472 + V + + R L L+ +PKLA + Sbjct: 476 ICTVGINLFRVLMAYLKPVMPKLAER 501 >gi|229158640|ref|ZP_04286698.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342] gi|228624624|gb|EEK81393.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342] Length = 544 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 129/513 (25%), Positives = 237/513 (46%), Gaps = 45/513 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFERCFRSLGFTYDCYTRTDGEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E + R N + +VK GL+D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G +FW + +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGKDDQEFWGKEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 +I WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SIIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + + Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIDVELKDKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALEAIFDAVRFANKYFDERQPWKQREDDPVLCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V +I A LL+ F+P + ++ + L + N Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506 >gi|158320039|ref|YP_001512546.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] gi|187645698|sp|A8MG12|SYM1_ALKOO RecName: Full=Methionyl-tRNA synthetase 1; AltName: Full=Methionine--tRNA ligase 1; Short=MetRS 1 gi|158140238|gb|ABW18550.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] Length = 540 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 131/500 (26%), Positives = 232/500 (46%), Gaps = 41/500 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ DV+AR+ R G +VL+ +G+D HG I+ A+N Sbjct: 3 IFIGGAWPYANGSLHLGHVAALLPGDVMARYFRAKGENVLYVSGSDCHGTPISIRAKNEN 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 V+ + +Q + F+ + L SYD + RT + H + + + K + + IY+ Sbjct: 63 VSPQEIAEQYHKEFKYCFEELGFSYDYYSRTDDAYHKEEVQRIIKLLYENEFIYEKEVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEG------------ 164 Y + D + +G + +P+ + Sbjct: 123 LYCADCNQFLPDRFVEGICPVCKNIARGDQCDVCSTILDPLDLHHRKCKICGSEPEIKNG 182 Query: 165 --YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222 FF+LS +Q+ L ++ E + + N ++K GL+D ++SR +WGI+IP Sbjct: 183 NQLFFKLSKFQEMLQNHLEDSKK-KWRVNALNNTERYLKEGLQDRAISR-DLNWGIEIPI 240 Query: 223 D--PQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFWPAD-LH--VIGKDILRFHAIY 274 + +YVWIDA+ Y T + G N D FW + +H + GKD + FH++ Sbjct: 241 KGYEEKRVYVWIDAVLGYYTVSKKWGIERNRDWET--FWSKEAIHYFIHGKDNIPFHSLI 298 Query: 275 WPAFLLSANLP-LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +PA L +P ++ S +I +G+KIS S + ++IE VD++RYFL+ Sbjct: 299 FPALLNGIGYKKMPDRIISSEYITLEGKKISTSNNWAVWVPDMIERYNVDSIRYFLLANG 358 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 +D + N +L GNLV+R+ + K ++ IP + +E I Sbjct: 359 PEKRDADFSWREFINSNNGELLGAYGNLVNRTFVFVKKYFNNTIPV----GKLEEEIERA 414 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 ++ E+ +++++ + AL Q+ + +++YFD + PW TN D S +Y + Sbjct: 415 TEKLYDEVGKSIESGNLRLALEQIFQFIRSINKYFDEETPWTTVNTNIDDCSNTIYNCLF 474 Query: 454 VIRQLAILLQAFVPKLANKI 473 I +A LL F+P + KI Sbjct: 475 SIINIANLLNPFLPSSSAKI 494 >gi|315426202|dbj|BAJ47845.1| methionyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum] gi|315426284|dbj|BAJ47926.1| methionyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum] Length = 514 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 136/473 (28%), Positives = 221/473 (46%), Gaps = 39/473 (8%) Query: 46 LFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105 +F +G+DEHG I A GV + D+N ++ + +S+D++ RT H Sbjct: 1 MFVSGSDEHGTPIEVEAAKRGVDPREITDKNHALVVELFNKFHLSFDNYTRTHNPTHIAF 60 Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH--- 154 C+ + KI + G IY+ + Y + D V Y+ A G A Sbjct: 61 CQNFFMKIYENGYIYEQDVNQLYCKNCGRFLPDRFVTGVCPSCGYQRARGDQCEACGKVL 120 Query: 155 NPVQWMEEEG--------------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200 +P+ +E +FF L + DKL ++ ++ L + RN +S++ Sbjct: 121 DPLDLLEPRCSICGEKPVVESSRHWFFDLPQFSDKLRTWLTTNT--TLSEKVRNFSLSWI 178 Query: 201 KSGLKDLSLSRKTFDWGIK--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KF 255 + GLK +++R WGI P +YVW +A+ Y + T G A +F Sbjct: 179 REGLKPRAVTRDNL-WGIPAPFPGAGNKTIYVWFEAVLGYPSATVEWAEKKGEPALWREF 237 Query: 256 WPA----DLHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGN 309 W + + IGKD + FH + PA LL+ + P LP V + ++ +G+K SKSLG Sbjct: 238 WLSPDTKSAYFIGKDNIPFHTVILPALLLATHEPYILPHIVSATEYLTFEGKKFSKSLGV 297 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 I + I + D RY+LV+ D + DGL VN+DL N +GN + R ++ I Sbjct: 298 GIWLDQAIALLEADIWRYYLVKIRPETGDTNFSYDGLMAVVNSDLNNDLGNFIHRVLTFI 357 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 ++D IP TE D +L+ + E+ + +AL VI L E + YF+ Sbjct: 358 NNNFDAKIPPATHLTEEDREMLAAIEKTFTEVDSLLSEAREKQALETVIQLAREGNVYFN 417 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 ++PW L K + A+TVLYV +V++ LA+LL F P +I +++ +E Sbjct: 418 RREPWRLVKARKEEAATVLYVAAQVLKALALLLAPFTPATTRRILELIGQGEE 470 >gi|118594693|ref|ZP_01552040.1| methionyl-tRNA synthetase [Methylophilales bacterium HTCC2181] gi|118440471|gb|EAV47098.1| methionyl-tRNA synthetase [Methylophilales bacterium HTCC2181] Length = 553 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 149/536 (27%), Positives = 241/536 (44%), Gaps = 64/536 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++A+ Y N H+GH E I D+ R+ RL G ++ + D HG I A+ Sbjct: 3 KIIATSALPYANGSIHLGHLVEYIQTDIWVRYQRLVGNEIHYICADDTHGTPIMLRAEKE 62 Query: 66 GVTTKVFVD----QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G++ + V+ ++S +F D +IS+D+F T + + L+K + I Sbjct: 63 GISPEQLVENVHKEHSADFSD----FNISFDNFYSTNSIENKNLSEALYKSLVGNNKIEA 118 Query: 122 GCYSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME-------- 161 +Y + + D KG A+ QY ++ ++P ++ Sbjct: 119 KEIEQFYDDKKNMFL-PDRFIKGTCPKCKANDQYGDSCESCGTTYSPTDLIDAYSVLTGS 177 Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 E YFF+LS + L + +S L E N++ + K+GL D +SR Sbjct: 178 KPVKKKTEHYFFKLSECESFLSEWTQSD---TLQKEALNKLQEWFKAGLADWDISRDAPY 234 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILR 269 +G +IP P YVW+DA Y+ + Y D + S +FW D +H IGKDIL Sbjct: 235 FGFEIPGAPGKYFYVWLDAPIGYMASFKNYADKNNLSYDEFWNKDSTTELVHFIGKDILY 294 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV-DALRYF 328 FHA++WPA L + P K+++HGF+ GEK+SKS G I I+ D LRY+ Sbjct: 295 FHALFWPATLKYSGHRTPSKIYAHGFLTVNGEKMSKSRGTFITARSYIDAFKTPDYLRYY 354 Query: 329 LVREIACGKDGFYD----KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 ++ D D D +VN+DL + N+ SR+ + K +D I F Sbjct: 355 YFSKL---NDSMGDIDLSLDDFIVKVNSDLIGKLVNIPSRTSGFVTKFFDNKIMLTTYFN 411 Query: 385 ESDESILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 ES+ IL V + +L E+ + + + +IS V V+ + + ++PW L K + Sbjct: 412 ESESQIL-VNNILLSKDEVTRLFEARQFSKICRLLISHVESVNEFVNNKEPWILAKDDAH 470 Query: 443 RAS-----TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493 + V ++ R L+I L +P L KI F +E F S+D L Sbjct: 471 KMKDSYLHEVCSAALQSFRLLSIYLSPIMPDLTKKIAS-FFNQEE---FSSIDNLL 522 >gi|78485381|ref|YP_391306.1| methionyl-tRNA synthetase [Thiomicrospira crunogena XCL-2] gi|123728026|sp|Q31GU1|SYM_THICR RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|78363667|gb|ABB41632.1| methionyl-tRNA synthetase [Thiomicrospira crunogena XCL-2] Length = 680 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 126/508 (24%), Positives = 225/508 (44%), Gaps = 43/508 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M K+ I++A+ Y N H+GH E I D+ ARF ++ G + + D HG I Sbjct: 1 MSNTRKILITSALPYANGPIHLGHLVEYIQTDIWARFQKMRGHECYYVCADDAHGTPIML 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ G+ + + + S + +I++D + T + ++ ++ ++ I Sbjct: 61 RAQAEGIDPEDLIARISEEHQTDFAGFNINFDFYHSTNSPENKHFASYIYTQLKEQNHIS 120 Query: 121 KGCYSGWYSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWM-------- 160 + +Y + + D D+ Y G + + A ++P + Sbjct: 121 RKTIKQFYDPEKKMFLPDRFIKGTCPKCKTDDQY-GDNCEACGATYSPTDLLNPKSAVSG 179 Query: 161 ------EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 E + FF LS ++D L + ++ H L + N++ + +SGL+ +SR Sbjct: 180 ATPIEKETDHLFFELSHFEDMLKEWTHQGH----LQTQIANKLDEWFESGLRAWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDI 267 +G +IP + YVW+DA Y+ + L + G +FW AD H IGKDI Sbjct: 236 PYFGFEIPGEKDKFFYVWLDAPVGYMASFKALCDKTGLDFDEFWKADSTTELYHFIGKDI 295 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L A P +FSHGF+ G+K+SKS G I ++ + + LRY Sbjct: 296 IYFHALFWPAMLSGAGFRTPNAIFSHGFLTVDGQKMSKSRGTFIMAKTYLDHLNPEYLRY 355 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ D + +RVN+DL + N+ SR + K +DG + A+++S Sbjct: 356 YFAAKLNSRIDDIDLSLEDFAQRVNSDLVGKVVNIASRCAGFVSKKFDGKLSQ--AWSDS 413 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 ++ + I + + +A+ ++++L + + Y D PW L K A Sbjct: 414 ASTLYQSFIDKSETIANLYEQREYAQAMREIMALADKANEYIDETAPWVLAKQEGKEAEL 473 Query: 447 VLYVT--VEVIRQLAILLQAFVPKLANK 472 V+ + + R L L +P A K Sbjct: 474 YESVSLGINLFRVLITYLAPVIPTTAEK 501 >gi|309787976|ref|ZP_07682585.1| methionyl-tRNA synthetase [Shigella dysenteriae 1617] gi|308924110|gb|EFP69608.1| methionyl-tRNA synthetase [Shigella dysenteriae 1617] Length = 652 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 124/483 (25%), Positives = 219/483 (45%), Gaps = 45/483 (9%) Query: 27 EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADV 86 E I ADV R+ R+ G +V F D HG I AQ G+T + + + S+ + Sbjct: 3 EHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAG 62 Query: 87 LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA- 145 +ISYD++ T + + +++ ++ + G I S Y ++ + D KG Sbjct: 63 FNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYD-PEKGMFLPDRFVKGTC 121 Query: 146 -----------DGQYYNAQHNPVQWME--------------EEGYFFRLSAYQDKLLSYY 180 + + A ++P + +E E +FF L ++ + L ++ Sbjct: 122 PKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWT 181 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 S L + N++ + +SGL+ +SR +G +IP+ P YVW+DA Y+ Sbjct: 182 RSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMG 238 Query: 241 TTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 + L + G F W D H IGKDI+ FH+++WPA L +N P +F Sbjct: 239 SFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFV 298 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVN 351 HG++ K+SKS G I + D+LRY+ +++ D + + +RVN Sbjct: 299 HGYVTVNSAKMSKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVN 358 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 AD+ N + NL SR+ I K +DG++ + A D + + + I E +++ Sbjct: 359 ADIVNKVVNLASRNAGFINKRFDGVLASELA----DPELYKTFTDAAEVIGEAWESREFG 414 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469 +A+ ++++L +RY D Q PW + K A + + + + R L L+ +PKL Sbjct: 415 KAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPKL 474 Query: 470 ANK 472 + Sbjct: 475 TER 477 >gi|170726330|ref|YP_001760356.1| methionyl-tRNA synthetase [Shewanella woodyi ATCC 51908] gi|226710923|sp|B1KQM2|SYM_SHEWM RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|169811677|gb|ACA86261.1| methionyl-tRNA synthetase [Shewanella woodyi ATCC 51908] Length = 688 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 135/507 (26%), Positives = 236/507 (46%), Gaps = 47/507 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ +RF +L G + + D HG I AQ Sbjct: 5 QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLKAQ 64 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + + Q N + +D AD +I +D+F T + + ++ K+ D G I Sbjct: 65 QMGIEPEEMIAQVNREHQQDFAD-FNIQFDNFHSTHSVENRELSSDIYLKLRDAGFIKTR 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160 S + +++ + D KG ++ QY A +NP + Sbjct: 124 TISQLFD-PEKSMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYNPTDLINPKSAVSGAT 182 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + E +FF L A++ L + S + E N++ + + GL+ +SR + Sbjct: 183 PVMKDSEHFFFDLPAFETMLSEWTRSG---AIQDEIANKLGEWFEQGLQQWDISRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILR 269 G +IPD P YVW+DA Y+ + L + D + FW D H IGKDI+ Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDRREDLNFDDFWAKDSSAEVYHFIGKDIVN 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH+++WPA L A P VF+HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 FHSLFWPAMLEGAGFRKPTSVFAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYY 359 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +RVN+DL + NL SR+ I K +DG + A T ++ Sbjct: 360 AAKLSGRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKL-AKVADTSLEQ 418 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446 + L + ++ E+ E+ + +A+ ++++L + Y PW+L K + A Sbjct: 419 TFLGKQT-LIAELYESRE---FGKAMREIMALADLANAYVADAAPWQLIKDEAKQEEAHQ 474 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKI 473 V + + R L L+ +PKLA+ + Sbjct: 475 VCSNALNLFRILVTYLKPVLPKLADDV 501 >gi|228942204|ref|ZP_04104744.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975133|ref|ZP_04135692.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981772|ref|ZP_04142067.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407] gi|228777884|gb|EEM26156.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407] gi|228784654|gb|EEM32674.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817538|gb|EEM63623.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942856|gb|AEA18752.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis CT-43] Length = 544 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 129/513 (25%), Positives = 237/513 (46%), Gaps = 45/513 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F+ L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPYCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E E R N + +VK GL+D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKKVVEIAKE--KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVS 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271 IP +D + ++VWI+A+ Y + + + G +FW +D +V GKD + FH Sbjct: 240 IPVKGYEDKK--IHVWIEAVAGYYSASKHWAEETGKDDQEFWNSDAQTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K YDG +P E + + Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGTVPKGTIDIELKDKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----EGLYKNVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V +I A LL+ F+P + ++ L + N Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRSTLSIIKRN 506 >gi|294675168|ref|YP_003575784.1| methionine--tRNA ligase [Prevotella ruminicola 23] gi|294472184|gb|ADE81573.1| methionine--tRNA ligase [Prevotella ruminicola 23] Length = 688 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 137/521 (26%), Positives = 244/521 (46%), Gaps = 45/521 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K ++ +++A+ Y N HIGH A + AD+ R+ RL +VLF G+DEHG I Sbjct: 4 KTYKRTTVTSALPYANGGVHIGHLAGVYVPADIYVRYLRLKKREVLFIGGSDEHGVPITV 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + +D + IS+D + RTT + HH +KK+ D+G + Sbjct: 64 RARKEGITPQDVVDRYHKMIKDSFEEFGISFDIYSRTTSETHHKFAAEWFKKLYDEGKLT 123 Query: 121 KGCYSGWYS------------------LRDEAYYNDDEVYKGAD---GQYYNAQHN---- 155 + Y +E Y D G D + N + Sbjct: 124 EETTEQLYDEEAKQFLADRYVTGECPHCHNEGAYGDQCEKCGRDLSPTELINPKSTISGS 183 Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 PV + + ++ L+ YQD L + E H E+ + + S++ L+ +++R Sbjct: 184 TPVL-KKTKNWYLPLNEYQDWLKQWILEEHKEWRPNV--YGQCKSWLDMDLQPRAMTRD- 239 Query: 214 FDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----LHVI 263 DWGI +P D ++YVW DA Y++ T L + G+ K+W + +H I Sbjct: 240 LDWGIPVPVKDAEGKVLYVWFDAPIGYVSNTKELCEKEPEKWGNWEKWWQDEDTRLVHFI 299 Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320 GKD + FH I +P + + +P V ++ F+ + +KIS S + E + ++ Sbjct: 300 GKDNIVFHCIIFPVMMKAHGKYIMPDNVPANEFLNLENDKISTSRNWAVWLHEYLVDMPG 359 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D LRY L KD + + R N +L GN V+R++ + K ++G++P Sbjct: 360 KQDVLRYVLTANAPETKDNNFTWKDFQDRNNNELVAVYGNFVNRALQLTKKYWNGVVPAC 419 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 G + + D + V +I EN++ A + ++L +RY +PW++ KT+ Sbjct: 420 GEWLDVDRQAIEEFKNVKIKIEENLEQFKFRDAQFEAMNLARIGNRYITECEPWKVWKTD 479 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 P R T+L + +++ LAI + F+P + K+ ++L +++ Sbjct: 480 PKRCETILNICLQLTANLAIAFEPFLPFSSKKLREMLNISN 520 >gi|91793410|ref|YP_563061.1| methionyl-tRNA synthetase [Shewanella denitrificans OS217] gi|123356753|sp|Q12MI8|SYM_SHEDO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|91715412|gb|ABE55338.1| methionyl-tRNA synthetase [Shewanella denitrificans OS217] Length = 689 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 130/513 (25%), Positives = 233/513 (45%), Gaps = 55/513 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + + K+ +++A+ Y N H+GH E I D+ +RF ++ G + + D HG I Sbjct: 3 QSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKMRGHECHYICADDAHGTPIMLK 62 Query: 62 AQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AQ G+ + + Q + +D AD ++++D+F T + + + ++ K+ D G I Sbjct: 63 AQQLGIAPEAMIAQVQIEHEQDFAD-FNVAFDNFHSTHSEENRELASDIYIKLRDAGHIK 121 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQYYN---------------------AQ 153 S Y +++ + D KG +D QY + + Sbjct: 122 TKTISQLYD-PEKSMFLPDRFVKGTCPKCKSDDQYGDNCDSCGATYSTTDLINPRSAVSG 180 Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 PV + E +FF L A++ L + S L E N++ + + GL+ +SR Sbjct: 181 ATPVM-KDTEHFFFDLPAFEGMLKEWIHSGS---LQSEMANKLNEWFEQGLQQWDISRDA 236 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPAD-----LHVI 263 +G +IPD P YVW+DA Y+ G N + FW D H I Sbjct: 237 PYFGFEIPDAPGKYFYVWLDAPIGYM---GSFKNFCAKRGDINFDDFWAKDSTAEVYHFI 293 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323 GKDI+ FH+++WPA L A L P V++HG++ G K+SKS G I ++ + + Sbjct: 294 GKDIVYFHSLFWPAMLEGAGLRKPTSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPE 353 Query: 324 ALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ +++ D + + +RVN+DL + NL SR+ I K +DG + Sbjct: 354 YLRYYYAAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLANV-- 411 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 +D S+ + I E + + +A+ +++++ + + Q PW+L K + Sbjct: 412 ---TDNSLAESFIAKQEVIAEFYEAREYGKAMREIMAMADIANGFVAEQAPWQLVKDDDK 468 Query: 443 RAST--VLYVTVEVIRQLAILLQAFVPKLANKI 473 +A V + + + R L L+ +P+L+ + Sbjct: 469 QAQAHEVCSIALNLFRILTTYLKPVLPRLSQDV 501 >gi|319900739|ref|YP_004160467.1| methionyl-tRNA synthetase [Bacteroides helcogenes P 36-108] gi|319415770|gb|ADV42881.1| methionyl-tRNA synthetase [Bacteroides helcogenes P 36-108] Length = 680 Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 139/513 (27%), Positives = 247/513 (48%), Gaps = 43/513 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL +V+F G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEEVVFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GVT + VD+ + + IS+D + RT+ K HHDT ++K+ +KG+ Sbjct: 63 RAKKEGVTPQDVVDRYHTLIKKSFEDFGISFDVYSRTSSKTHHDTASDFFRKLYEKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + ++G Y + + Sbjct: 123 EKTSMQYYDEEAKQFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 PV E + ++ L +++ L + E H E+ + + S++ GL+ ++SR Sbjct: 183 KPVM-RETKHWYLPLDKHENWLRRWILEEHKEWRPNV--YGQCKSWLDMGLQPRAVSRD- 238 Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDI 267 DWGI +P + ++YVW DA Y++ T L P+ S K+W +H IGKD Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPE-SWEKWWKDPETRLVHFIGKDN 296 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324 + FH I +PA L + + LP V S+ F+ +G+KIS S + E +++ D Sbjct: 297 IVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDV 356 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N +L GN V+R++ + K +DG++P T Sbjct: 357 LRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGVVPAAAGLT 416 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 + D L S V E+ + + A + ++L ++Y +PW+L KT+ +R Sbjct: 417 DYDRETLKEFSDVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMERV 476 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +T+L + ++++ LAI + F+P ++K+ +L Sbjct: 477 ATILNIALQLVANLAIAFEPFLPFSSDKLRKML 509 >gi|28807062|dbj|BAC60332.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] Length = 676 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 131/503 (26%), Positives = 220/503 (43%), Gaps = 46/503 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ G Sbjct: 1 MLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMG 60 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + + S + DIS+D++ T + + + ++ ++ G I S Sbjct: 61 ITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQ 120 Query: 127 WYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM--------E 161 + E + D D+ D G+ Y+ NP + + Sbjct: 121 LFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMKD 180 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 E +FF L ++ L + S L E N++ + +SGL+ +SR +G +IP Sbjct: 181 SEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEIP 237 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAIY 274 + YVW+DA Y+ + L N D ++W D H IGKDI+ FH+++ Sbjct: 238 GEKDKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSLF 297 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L + P VF HG++ G K+SKS G + ++ + + LRY+ ++ Sbjct: 298 WPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAKLN 357 Query: 335 CGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + + +RVNAD+ N I NL SR+ I K ++G + A E ++ Sbjct: 358 SRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFVAA 417 Query: 394 CSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLY 449 R+ + E RE RA+ ++ +L + ++Y D + PW + K + Sbjct: 418 ADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEICS 471 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P LA + Sbjct: 472 VGINLFRVLMTYLKPVMPALAAR 494 >gi|194290515|ref|YP_002006422.1| methionyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424] gi|226710902|sp|B3R678|SYM_CUPTR RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|193224350|emb|CAQ70361.1| methionine tRNA synthetase [Cupriavidus taiwanensis LMG 19424] Length = 688 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 147/536 (27%), Positives = 239/536 (44%), Gaps = 64/536 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N Q HIGH E I D+ RF R+ G +V + D HG + A+ Sbjct: 5 RILVTSALPYANGQIHIGHLVEYIQTDIWVRFQRMMGNEVYYVGADDTHGTPVMLRAEKE 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T K +D+ + D +S+D++ T + + + C ++ + + I + Sbjct: 65 GITPKALIDRVWTEHKRDFDSFLVSFDNYYSTDAEENRELCEKIYLALKAEDLIAEREVE 124 Query: 126 GWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME------- 161 +Y + D E K GA QY ++ NP + Sbjct: 125 QFYDPVKNMFLPDRFIKGECPKCGAKDQYGDSCEVCGTTYVPTDLKNPYSVVSGATPVRK 184 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-----KSGLKDLSLSRKTFD 215 YFF+LS + S+ + E N++ ++ S L D +SR Sbjct: 185 SSAHYFFKLS--DPRCESFLREWVADLAQPEAANKMQEWLGAEGEASTLSDWDISRDAPY 242 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILR 269 +G +IP P YVW+DA Y + L G W H IGKDIL Sbjct: 243 FGFEIPGAPGKYFYVWLDAPIGYYASFKNLAQQRGIDFDAWVGPHSTAEQYHFIGKDILY 302 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328 FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LRY+ Sbjct: 303 FHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGMNPEWLRYY 362 Query: 329 LVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ A +D + D RVN+DL N+ SR+ ++K +DG + D Sbjct: 363 FAAKLNASMEDLDLNLDDFIARVNSDLIGKYVNIASRAAGFLVKRFDGKV---------D 413 Query: 388 ESILSVCSRVLQEIRENMQNQLIH--------RALAQVISLVSEVDRYFDAQKPWELKKT 439 E+ L+ +L+++RE Q+ H +AL V+ L V+ + D +KPWEL K Sbjct: 414 EAALA--HPLLEQLRE-AAPQVAHLYESREYSKALRLVMELTDAVNAFVDTEKPWELAKD 470 Query: 440 NPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493 + RA+ V++E R L I L+ VP +A + L VA + ++++DQ+L Sbjct: 471 DGKRAALHAACSVSLEAFRLLTIYLKPVVPNVAAGVERFLNVAPLD--WRAIDQQL 524 >gi|149188165|ref|ZP_01866460.1| methionyl-tRNA synthetase [Vibrio shilonii AK1] gi|148838153|gb|EDL55095.1| methionyl-tRNA synthetase [Vibrio shilonii AK1] Length = 688 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 132/504 (26%), Positives = 221/504 (43%), Gaps = 46/504 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 12 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNVVNFICADDAHGTPIMLKAQQM 71 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G++ + + S + DIS+D++ T + + + ++ ++ G I S Sbjct: 72 GISPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 131 Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160 + E + D D+ D G+ Y+ NP + Sbjct: 132 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPIMK 191 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + E +FF L ++ L + S L E N++ + +SGL+ +SR +G +I Sbjct: 192 DSEHFFFDLPQFESMLKEWTRSGS---LQTETANKMQEWFESGLQQWDISRDAPYFGFEI 248 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273 P + YVW+DA Y+ + L + D ++W D H IGKDI+ FH++ Sbjct: 249 PGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFEEYWNKDSNTELYHFIGKDIVYFHSL 308 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L + P VF HG++ G K+SKS G + ++ + + LRY+ ++ Sbjct: 309 FWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAKL 368 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + + +RVNAD+ N I NL SR+ I K ++G + A E ++ Sbjct: 369 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSENFAEPELYNEFVA 428 Query: 393 VCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVL 448 R+ L E RE RA+ ++ +L + ++Y D + PW + K + Sbjct: 429 AADRIAELYEARE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDIC 482 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P LA + Sbjct: 483 SVGINLFRVLMTYLKPVMPALAAR 506 >gi|329898088|ref|ZP_08272297.1| Methionyl-tRNA synthetase [gamma proteobacterium IMCC3088] gi|328920960|gb|EGG28385.1| Methionyl-tRNA synthetase [gamma proteobacterium IMCC3088] Length = 683 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 141/544 (25%), Positives = 242/544 (44%), Gaps = 48/544 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++ ++ +++A+ Y N H+GH E I D+ RF + G + + D HG I Sbjct: 4 QQPRRILVTSALPYANGPLHLGHMLEQIQTDIWVRFQQSQGNECYYICADDAHGTAIMLK 63 Query: 62 AQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRT--TEKRH---------HDTCRIL 109 AQ G+T + ++Q ++ RD L +++D F T E R+ D+ +I+ Sbjct: 64 AQALGITPEQLIEQVREQHERDSRGFL-VNFDHFYSTHSDENRYWSERIYGALRDSGQIV 122 Query: 110 WKKISDKGDIYKGCY-------SGWYSLRDEAYYNDDEVYKGA--------DGQYYNAQH 154 + I D KG + + Y D+ GA D + Sbjct: 123 KRNIVQAFDPEKGLFLADRFIKGTCPKCKTSDQYGDNCESCGATYTPNDLIDPVSALSGA 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 PVQ E E YF L+ + L + S L + N++ ++ +GL+ +SR Sbjct: 183 KPVQ-KESEHYFLDLAQSSELLTDWINSGR---LQSQVANKLREWLDAGLQGWDISRDAP 238 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW----PADL-HVIGKDIL 268 +G +IPD P YVW+DA Y+ + + FW +L H IGKDI+ Sbjct: 239 YFGFEIPDAPGKYFYVWLDAPIGYIASFDNFSKQNNLDFESFWFDGKATELYHFIGKDII 298 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH ++WPA L +A L P +++HGF+ G K+SKS G I+ + + + LRY+ Sbjct: 299 NFHGLFWPAMLNAAGLRAPSAIYAHGFLTVNGTKMSKSRGTFINASNYLSHLAPEYLRYY 358 Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ D + + +RVN+D+ I N+ SR + K +D + A + Sbjct: 359 FAAKLGPSVDDIDLNLEDFVQRVNSDVVGKIVNIASRCAGFLKKRFDNTL----AAEQEA 414 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446 +LS + I + + + +RA+ +VI+L +V+++ D ++PW L K + A Sbjct: 415 PELLSDLLDARRSIAAHFEGRDYNRAIREVIALADKVNQFIDEKQPWVLAKDEANNAQVH 474 Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505 V V+ R L L +P++A K + L + F +L+ L P + F P Sbjct: 475 RVCSDGVQAFRILVSYLAPVLPEMATKSENFL---NTQLTFSNLESGLLPAGHQLEPFSP 531 Query: 506 IFPR 509 + R Sbjct: 532 LMQR 535 >gi|76788744|ref|YP_327830.1| methionyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13] gi|123731253|sp|Q3KMZ0|SYM_CHLTA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|76167274|gb|AAX50282.1| methionyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13] Length = 550 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 138/516 (26%), Positives = 234/516 (45%), Gaps = 52/516 (10%) Query: 3 EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 E ++ I++A+ Y N H GH AY + ADV ARF RL G +VL+ G+DE+G I Sbjct: 2 ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ AG+ + +VD + +D L IS D F RTT H + ++ + ++G + Sbjct: 60 LNAELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNTYHPAIVQDFYRNLQERGLV 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155 YS + + D V +G + Q A + Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTG 179 Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + + E + L ++ LL+ F+ I R + +FV ++ L T Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLA-------FVQGIYLRPHIRNFVTDYIEHLRPRAVTR 232 Query: 215 D--WGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIG 264 D WGI +PD + YVW DA Y++ T + +P+ K KFW D IG Sbjct: 233 DLSWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGDPEAWK-KFWLDDTVTYAQFIG 291 Query: 265 KDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 KD FHA+ +PA + +LP K + + F+L +G + SKS GN ID +E + Sbjct: 292 KDNTSFHAVIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSL 351 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D LRY L D + K R N++L GN V+R ++ +K+ + +P Sbjct: 352 DKLRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-Q 410 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNP 441 + D +S ++ ++ E+ + +A + ++ L + + YF+ + PW+L K+ N Sbjct: 411 LEQKDLDFISKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNW 470 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +R +L+ + LA++ +P+ A KI +++ Sbjct: 471 NRVRAILFCACYCQKLLALISYPIMPETALKILEMI 506 >gi|296435548|gb|ADH17722.1| methionyl-tRNA synthetase [Chlamydia trachomatis G/9768] gi|296437408|gb|ADH19569.1| methionyl-tRNA synthetase [Chlamydia trachomatis G/11074] gi|297139907|gb|ADH96665.1| methionyl-tRNA synthetase [Chlamydia trachomatis G/9301] Length = 550 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 136/514 (26%), Positives = 236/514 (45%), Gaps = 48/514 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 E ++ I++A+ Y N H GH AY + ADV ARF RL G +VL+ G+DE+G I Sbjct: 2 ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ AG+ + +VD + +D L IS D F RTT H + ++ + ++G + Sbjct: 60 LNAELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNTYHPAIVQDFYRNLQERGLV 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155 YS + + D V +G + Q A + Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKELRSKLTG 179 Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + + E + L ++ LL++ + L RN V +++ L+ +++R Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLAFVQG---IYLRPHMRNFVTDYIEH-LRPRAVTRD-L 234 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGKD 266 WGI +PD + YVW DA Y++ T + +P+ K KFW D IGKD Sbjct: 235 SWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGDPEAWK-KFWLDDTVTYAQFIGKD 293 Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324 FHA+ +PA + +LP K + + F+L +G + SKS GN ID +E +D Sbjct: 294 NTSFHAVIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSLDK 353 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L D + K R N++L GN V+R ++ +K+ + +P Sbjct: 354 LRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-QLE 412 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDR 443 + D +S ++ ++ E+ + +A + ++ L + + YF+ + PW+L K+ N +R Sbjct: 413 QKDLDFISKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNR 472 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +L+ + LA++ +P+ A KI +++ Sbjct: 473 VRAILFCACYCQKLLALISYPIMPETALKILEMI 506 >gi|145299044|ref|YP_001141885.1| methionyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] gi|142851816|gb|ABO90137.1| methionyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] Length = 677 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 130/502 (25%), Positives = 222/502 (44%), Gaps = 43/502 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ A+ Y N H+GH E I AD+ R+ R+ G V F D HG I AQ G Sbjct: 8 MLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHQVHFICADDAHGTPIMLKAQQMG 67 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + + S+ + +IS+D++ T + + +++ ++ D G I + Sbjct: 68 ITPEEMIAAVSKEHQTDFAGFNISFDNYHSTHSDENRELAELIYGRLKDGGFIKGRTITQ 127 Query: 127 WYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------------- 161 + +++ + D KG + QY ++P + ++ Sbjct: 128 LFD-PEKSMFLPDRFVKGTCPKCKSPEQYGDNLRQLRCHYSPTELIDPKSAVSGATPVMK 186 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E +FF L ++ L + + E N++ + +SGL+ ++R +G +I Sbjct: 187 DSEHFFFDLPQFETWLAGWVRG--SGAIQEEMANKMQEWFESGLQQWDITRDAPYFGFEI 244 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHAI 273 P P YVW+DA Y+ + L N G +W AD H IGKDI FH + Sbjct: 245 PGAPGKYFYVWLDAPIGYMASFKNLCNKRGDIDFDSYWKADSEAELYHFIGKDIAYFHCL 304 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WP+ L A P KV HG++ G K+SKS G I + + + LRY+ ++ Sbjct: 305 FWPSMLEGAGFRKPTKVNVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYYAAKL 364 Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + D RVNAD+ N + NL SR+ I K +DG + A T ++ + + Sbjct: 365 NSRIDDLDLNLDDFVARVNADVVNKLVNLASRNAGFIAKRFDGKL----AATCAEPELYA 420 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450 + I E + + RA+ ++++L + +RY D + PW L K A V V Sbjct: 421 EFANASASISEAYEAREFSRAIREIMALADKANRYVDEKAPWVLAKQEGADAELQAVCSV 480 Query: 451 TVEVIRQLAILLQAFVPKLANK 472 + + R L L+ +P LA + Sbjct: 481 GINLFRVLMAYLKPVMPLLAER 502 >gi|299771390|ref|YP_003733416.1| methionyl-tRNA synthetase [Acinetobacter sp. DR1] gi|298701478|gb|ADI92043.1| methionyl-tRNA synthetase [Acinetobacter sp. DR1] Length = 688 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 143/543 (26%), Positives = 238/543 (43%), Gaps = 63/543 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I AD+ R R G DV + D HG I A+ Sbjct: 3 KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62 Query: 66 GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G++ + + + RD D + +D + T + ++ K + G+I Sbjct: 63 GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161 + + ++ + D KG ++ QY YNA NP + Sbjct: 122 TQLFD-PEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPV 180 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + YFF+L + + L + + E LP+ N++ + ++GL D +SR +G Sbjct: 181 EKSSDHYFFKLPNFAEYLQKW--TRDEGRLPVSIANKLDEWFEAGLADWDISRDAPYFGF 238 Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLD--NPDGSKAKFWPAD-----LHVIGKDILRF 270 +IPD P YVW+DA Y+++ Y+ PD + FW D H IGKDI+ F Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPDLNFDDFWKKDSQNDVYHFIGKDIVYF 298 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 HA++WPA L AN P +F +GF+ G+K+SKS G I ++ + + LRY+ Sbjct: 299 HALFWPAMLDGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ +D + D ++VN+DL + N+ SR I ++ + A E +S Sbjct: 359 SKLSDKVEDSDLNLDDFIQKVNSDLVGKVVNIASRCAKFINSSFNNTLSAECAEPELVQS 418 Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446 + + E RE A+ ++++L ++Y D +KPW L K Sbjct: 419 FIDAGDSIASAYEARE------FSLAIREIMALADRANQYIDEKKPWALAKQEGQEQQVL 472 Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQR 492 V V + + RQLA+ L +P LA ++ L V+ E FQ L QR Sbjct: 473 DVCSVGINLFRQLAVYLAPVLPTLAEQVQGFLKLESFNFESRKQILVSHEIAQFQPLMQR 532 Query: 493 LKP 495 + P Sbjct: 533 VDP 535 >gi|237804381|ref|YP_002888535.1| methionyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT] gi|255310833|ref|ZP_05353403.1| methionyl-tRNA synthetase [Chlamydia trachomatis 6276] gi|255317133|ref|ZP_05358379.1| methionyl-tRNA synthetase [Chlamydia trachomatis 6276s] gi|231272681|emb|CAX09584.1| methionyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT] gi|296436472|gb|ADH18642.1| methionyl-tRNA synthetase [Chlamydia trachomatis G/11222] Length = 550 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 136/514 (26%), Positives = 236/514 (45%), Gaps = 48/514 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 E ++ I++A+ Y N H GH AY + ADV ARF RL G +VL+ G+DE+G I Sbjct: 2 ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ AG+ + +VD + +D L IS D F RTT H + ++ + ++G + Sbjct: 60 LNAELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNTYHPAIVQDFYRNLQERGLV 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155 YS + + D V +G + Q A + Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTG 179 Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + + E + L ++ LL++ + L RN V +++ L+ +++R Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLAFVQG---IYLRPHMRNFVTDYIEH-LRPRAVTRD-L 234 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGKD 266 WGI +PD + YVW DA Y++ T + +P+ K KFW D IGKD Sbjct: 235 SWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGDPEAWK-KFWLDDTVTYAQFIGKD 293 Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324 FHA+ +PA + +LP K + + F+L +G + SKS GN ID +E +D Sbjct: 294 NTSFHAVIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSLDK 353 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L D + K R N++L GN V+R ++ +K+ + +P Sbjct: 354 LRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-QLE 412 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDR 443 + D +S ++ ++ E+ + +A + ++ L + + YF+ + PW+L K+ N +R Sbjct: 413 QKDLDFISKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNR 472 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +L+ + LA++ +P+ A KI +++ Sbjct: 473 VRAILFCACYCQKLLALISYPIMPETALKILEMI 506 >gi|256820661|ref|YP_003141940.1| methionyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271] gi|256582244|gb|ACU93379.1| methionyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271] Length = 688 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 135/510 (26%), Positives = 227/510 (44%), Gaps = 47/510 (9%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I+ A+ Y N HIGH A + AD+ AR+ RL DV F G+DEHG I+ A+ G Sbjct: 7 ITAALPYTNGPIHIGHLAGVYVPADIFARYQRLKNNDVAFICGSDEHGVAISIKAKKEGT 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + +D+ + IS+D++ RT+ HH T +KK+ ++GD + Sbjct: 67 TPQAIIDKYHAIIKQSFADFGISFDNYSRTSAPIHHQTASDFFKKLYEQGDFIEEISEQL 126 Query: 128 YSLRDEAYYNDDEVY----KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y + D V K + + Y Q E G + D S S Sbjct: 127 YDEEAHQFLADRFVIGTCPKCGNPEAYGDQ------CERCGSSLNATDLIDPKSSITGSK 180 Query: 184 P------EFILPIERRNE-----------------VISFVKSGLKDLSLSR---KTFDWG 217 P + LP+ R E V VKS L D R + DWG Sbjct: 181 PTLKATKHWFLPLNRYQEFLEKWILEGHKSDWKPNVYGQVKSWLDDELKPRAVTRDLDWG 240 Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270 I +P + ++YVW DA Y+++T +G + + D +H IGKD + F Sbjct: 241 IPVPVEGAEGKVLYVWFDAPIGYISSTKEWAEREGKDWRPYWQDSDTQLVHFIGKDNIVF 300 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327 H I +PA L + + LP V ++ F+ +G K+S S + E +++ D LRY Sbjct: 301 HCIIFPAMLKAEGSFILPANVPANEFLNLEGNKLSTSKNWAVWLHEYLQDFPNQQDVLRY 360 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L KD + + R N +L GN ++R + K Y+G++P + D Sbjct: 361 VLTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVAVLTQKYYEGVVPQADTYNNVD 420 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 L + + +I ++++ A +++++ ++Y ++PW+L KT+P+R TV Sbjct: 421 NETLRQITELTDKIEQSLERYRFREAQQELMNMARLGNKYLADEEPWKLIKTDPERVKTV 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +Y+ +++ LA+ + F+P + K+ +L Sbjct: 481 MYIALQIATALAVASEPFLPFTSEKLKRML 510 >gi|229118509|ref|ZP_04247863.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-3] gi|228665079|gb|EEL20567.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-3] Length = 544 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 131/513 (25%), Positives = 235/513 (45%), Gaps = 45/513 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G I A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPITIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT D+ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTVVEIADKYHEEFERCFHSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQVKRDVEIAKQ--TGAWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADL---HVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G +FW + +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGKDDQEFWDKETKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 +I WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILESYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K YDG++P E E I Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGVVPKGTIHVELKEKI 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + + E+++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----EGLYINVGESIEQTKFKVALETLFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V +I A LL+ F+P + ++ + L + N Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506 >gi|327401646|ref|YP_004342485.1| methionyl-tRNA synthetase [Archaeoglobus veneficus SNP6] gi|327317154|gb|AEA47770.1| Methionyl-tRNA synthetase [Archaeoglobus veneficus SNP6] Length = 665 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 136/502 (27%), Positives = 228/502 (45%), Gaps = 53/502 (10%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N + HIGH + ADV R+ ++ G DV+F G+D HG I A+ G++ Sbjct: 8 VTCGLPYANGKAHIGHLRTYVPADVYVRYLKMLGEDVIFICGSDCHGTPIVVNAEKEGIS 67 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + VD+ +F+ + +DI +D F RT + HH + KK+ + G I+ Y Sbjct: 68 PRELVDRYHDHFQKVFKAIDIEFDFFGRTDSEYHHIRTQEFVKKLIENGYIFPKEIELAY 127 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQH-NPVQWME--------------EE 163 + + + D V +G + +H P + E ++ Sbjct: 128 CPKCQRFLPDRYVEGICPYCGSVARGDECDQGCGRHLEPGEIKEPKCKICGSNAVFRKQK 187 Query: 164 GYFFRLSAYQDKLLSYYES--HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 YFFRL+A++D LL Y E+ E L N +VK LKD ++R +WG+K P Sbjct: 188 HYFFRLTAFKDFLLDYLENLRGTENAL-----NYAKQWVKGELKDWCITR-NLEWGVKFP 241 Query: 222 DDPQYIMYVWIDALTNYLTTT-----GYLDNPD---GSKAKFWPADLHVIGKDILRFHAI 273 + ++YVW+DA Y++ T G D D KA+ +H IG DI+ H I Sbjct: 242 GE-DLVVYVWVDAPIGYISFTEKACEGRCDWKDIWINGKAEI----IHFIGLDIVYHHCI 296 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYFLVR 331 +WPA L A LP V + G + +G+ SKS G V+ + + G D LRY++V Sbjct: 297 FWPAMLKGAGYALPNAVVASGMVKVEGKTFSKSRGYVVWVEDDYLKAGFNTDYLRYYIVN 356 Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + +D + + + +VN +L +GN + R + K++ + +E DE I+ Sbjct: 357 YTSHQRDLNFSWEVFRDKVNNELIATLGNFLYRVMHFAWKNFGSV-----EVSEVDEEIM 411 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451 + +I ++ A + L + YF KPWEL K N + V+ Sbjct: 412 QKIAETKDKIVRALEEWEFKVASDAFMELAGFGNVYFQNVKPWELIKENKEECIKVIANC 471 Query: 452 VEVIRQLAILLQAFVPKLANKI 473 +++ + L I +P+ K+ Sbjct: 472 LQLAKALIIFSYPVMPRTMEKM 493 >gi|260909882|ref|ZP_05916571.1| methionine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295] gi|260635986|gb|EEX53987.1| methionine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295] Length = 750 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 150/539 (27%), Positives = 241/539 (44%), Gaps = 51/539 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ I+ A+ Y N HIGH A + AD+ AR+ RL DV+F G+DEHG I Sbjct: 73 KQYKRTTITAALPYANGGVHIGHLAGVYVPADIYARYMRLKKEDVVFIGGSDEHGVPITI 132 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GV+ + VD+ + + IS+D + RTT HH +KK+ + G + Sbjct: 133 RARKEGVSPQDVVDRFHAMIKKSFEDFGISFDIYSRTTSPTHHQLASDFFKKLYEDGKLL 192 Query: 121 KGCYSGWYS------------------LRDEAYYNDDEVYKGADGQYYNAQH-------- 154 + +Y +E Y D G D H Sbjct: 193 EKETEQYYDEEAHQFLADRYITGECPHCHNEGAYGDQCEKCGRDLSPTELLHPRSTISGS 252 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 PV + + ++ L YQD L + E H E+ R V KS L D+ L + Sbjct: 253 QPVL-KKTKNWYLPLDKYQDWLKEWILEGHKEW------RPNVYGQCKSWL-DIDLQPRA 304 Query: 214 ----FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVI 263 DWGI +P + ++YVW DA Y++ T L PD + K+W +H I Sbjct: 305 MTRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-TWEKWWKDPETRLVHFI 362 Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320 GKD + FH I +P L + LP+ V S+ F+ + +KIS S + E +E+ Sbjct: 363 GKDNIVFHCIVFPVMLKAHGGYILPENVPSNEFLNLEDDKISTSKNWAVWLHEYLEDFPG 422 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D LRY L KD + ++R N +L GN V+R++ + K +DG +P Sbjct: 423 KQDVLRYVLTANAPETKDNNFTWKDFQERNNNELVAVYGNFVNRALQLTKKYFDGRVPAC 482 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 G + D+ L V +++ + A + + L +RY +PW++ KT+ Sbjct: 483 GELNDVDKQALDEFKDVKEKVESLLDTYKFRDAQKEAMVLARIGNRYITECEPWKVWKTD 542 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499 P R T+LY++++++ LAI + F+P + K+ +L + + + LKPG L Sbjct: 543 PKRVETILYISLQLVANLAIAFEPFLPFSSAKLRRLLNMEGVDWNALGNTEILKPGHQL 601 >gi|223558006|gb|ACM91012.1| methionyl-tRNA synthetase [uncultured bacterium URE4] Length = 724 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 139/516 (26%), Positives = 238/516 (46%), Gaps = 41/516 (7%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M + ++ ++ A+ Y N HIGH A I D+ R+ RL G DV+F G+DEHG I Sbjct: 1 MNDHKRTLVTCALPYANGPVHIGHLAGAYIPGDIYVRYLRLRGEDVVFVCGSDEHGVPIT 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ GVT + VDQ + +D L I++D + RTT H T ++K+ D Sbjct: 61 IKARAQGVTPQDIVDQYHQVMKDAFTGLGINFDIYSRTTSDVHDKTASEFFRKLYDNDKF 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWMEEEG---- 164 +Y + + D + G G Y + +P + ++ Sbjct: 121 ITKETEQYYDEEAKTFLADRYIVGTCPKCGNPGAYGDQCEKCGSTLSPEELIDPRSALSG 180 Query: 165 ----------YFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 ++ L Y+ L + E H E+ + + S++ GL+ ++SR Sbjct: 181 STPKKVKTKHWYLPLDQYEPWLRDWILEQHKEWKTNV--YGQCKSWLDGGLQPRAVSRD- 237 Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDI 267 DWG+ +P + ++YVW DA Y++ T L P+ S K+W +H IGKD Sbjct: 238 LDWGVPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPE-SWEKWWKDPETRLVHFIGKDN 295 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324 + FH I +P+ L + + LP+ V ++ F+ +G+KIS S + E E+ D Sbjct: 296 IVFHCIVFPSMLKAYGDFVLPENVPANEFLNLEGDKISTSRNWAVWVHEYEEQFPGQEDV 355 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + ++R N++L GN V+R+V + K +DG++P Sbjct: 356 LRYVLTANAPETKDNDFTWKDFQQRNNSELVAVFGNFVNRAVVLTHKYFDGVVPENRKPE 415 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 D L+ + + + ++ AL + +++ ++Y +PW++ KT+ DR Sbjct: 416 PIDAETLASIVPCKEALEKYVETFHFREALKEAMNIARIGNKYISDMEPWKVAKTDMDRT 475 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +++LY +++ LAI + F P A K+ DIL V Sbjct: 476 ASILYTCLQICADLAIAFEPFTPFSAGKLRDILRVG 511 >gi|300778746|ref|ZP_07088604.1| methionine--tRNA ligase [Chryseobacterium gleum ATCC 35910] gi|300504256|gb|EFK35396.1| methionine--tRNA ligase [Chryseobacterium gleum ATCC 35910] Length = 679 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 137/508 (26%), Positives = 237/508 (46%), Gaps = 43/508 (8%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I+ A+ Y N HIGH A I ADV ARF R G DV F G+DEHG I A+ GV Sbjct: 7 ITAALPYANGPVHIGHLAGVYIPADVYARFQRRLGKDVAFICGSDEHGIPITIRAKKEGV 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + VD+ + L IS+D++ RTT K+H++T + +K + +KG + + Sbjct: 67 TPQDIVDKYHGIIKKSFSDLGISFDEYSRTTSKKHYETSQDFFKVLYEKGKFTEEVSEQY 126 Query: 128 YSLRDEAYYND-----------------DEVYKGADGQYYNAQHNPVQWM--------EE 162 + + + D D+ K + NP + E Sbjct: 127 FDEQAGEFLADRYIVGTCPNCGNENAYGDQCEKCGTTLSPSELINPKSMLSGNVPILKET 186 Query: 163 EGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 + ++ L+ Y+D L + E H + P +V S++ GLK +++R +WG+ +P Sbjct: 187 KNWYLPLNEYEDFLNQWIIEGHKDDWKP-NVYGQVKSWLNDGLKPRAMTRD-LNWGVPVP 244 Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRFHAIY 274 + ++YVW DA Y++ T +G K +W ++ +H IGKD + FH I Sbjct: 245 LPNAEGKVLYVWFDAPIGYISFTKEWAEKNGKDWKDYWQSEDSDLVHFIGKDNIVFHCII 304 Query: 275 WPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLVR 331 +P+ + + + +P V + F+ + +KIS S + E +E+ D LRY L+ Sbjct: 305 FPSMMKAHGDYIMPANVPAFEFLNLENDKISTSRNWAVWAHEYVEDFPGQQDVLRYVLLS 364 Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 KD + + + N++LAN GN ++R +I K+++G +P E I Sbjct: 365 SAPETKDNNFTWKDFQTKNNSELANIFGNFINRVAVLINKNFEGKVPKGDVNAPELEEI- 423 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451 + EIR ++N AL ++L ++Y ++PW+ K + ++ L++ Sbjct: 424 ---GKRAVEIRNFLENYEFRNALTAFMNLARFGNQYLQNEEPWKTVKNDLEKTKNTLFIG 480 Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFV 479 ++ LA L + F+P A K+++I V Sbjct: 481 AQISVALANLAEPFLPFTAQKLYEIFNV 508 >gi|166154253|ref|YP_001654371.1| methionyl-tRNA synthetase [Chlamydia trachomatis 434/Bu] gi|166155128|ref|YP_001653383.1| methionyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335502|ref|ZP_07223746.1| methionyl-tRNA synthetase [Chlamydia trachomatis L2tet1] gi|229470712|sp|B0B9D9|SYM_CHLT2 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|229470713|sp|B0BB18|SYM_CHLTB RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|165930241|emb|CAP03726.1| methionyl-tRNA synthetase [Chlamydia trachomatis 434/Bu] gi|165931116|emb|CAP06680.1| methionyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 550 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 136/514 (26%), Positives = 236/514 (45%), Gaps = 48/514 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 E ++ I++A+ Y N H GH AY + ADV ARF RL G +VL+ G+DE+G I Sbjct: 2 ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ AG+ + +VD + +D L IS D F RTT H + ++ + ++G + Sbjct: 60 LNAELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNAYHPAIVQDFYRNLQERGLV 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155 YS + + D V +G + Q A + Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTG 179 Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + + E + L ++ LL++ + L RN V +++ L+ +++R Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLAFVQG---IYLRPHMRNFVTDYIEH-LRPRAVTRD-L 234 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGKD 266 WGI +PD + YVW DA Y++ T + +P+ K KFW D IGKD Sbjct: 235 SWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGDPEAWK-KFWLDDTVTYAQFIGKD 293 Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324 FHA+ +PA + +LP K + + F+L +G + SKS GN ID +E +D Sbjct: 294 NTSFHAVIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSLDK 353 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L D + K R N++L GN V+R ++ +K+ + +P Sbjct: 354 LRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-QLE 412 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDR 443 + D +S ++ ++ E+ + +A + ++ L + + YF+ + PW+L K+ N +R Sbjct: 413 QKDLDFISKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNR 472 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +L+ + LA++ +P+ A KI +++ Sbjct: 473 VRAILFCACYCQKLLALISYPIMPETALKILEMI 506 >gi|169634155|ref|YP_001707891.1| methionyl-tRNA synthetase [Acinetobacter baumannii SDF] gi|169152947|emb|CAP01992.1| methionyl-tRNA synthetase [Acinetobacter baumannii] Length = 687 Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 145/546 (26%), Positives = 241/546 (44%), Gaps = 69/546 (12%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I AD+ R R G DV + D HG I A+ Sbjct: 3 KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62 Query: 66 GVT-TKVFVDQNSRNFRDMADVLDISYDDF---------IRTTEK--RHHDTCRILWKKI 113 G++ + + + RD D + +D + R+T+ ++ + I + + Sbjct: 63 GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDVNKARSTDIYIKNREAGNIAVRPV 121 Query: 114 SDKGDIYKGCY-------SGWYSLRDEAYYNDD-EVYKGADGQYYNAQH--NPVQWME-- 161 + D KG + + E Y D EV G YNA NP + Sbjct: 122 TQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVC----GTTYNATELLNPRSTLSGA 177 Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 + YFF+L + + L + + E LP+ N++ + ++GL D +SR Sbjct: 178 TPVEKSSDHYFFKLPNFAEYLQKW--TRDEGRLPLSIANKLDEWFEAGLADWDISRDAPY 235 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDI 267 +G +IPD P YVW+DA Y+++ Y+ PD + FW D H IGKDI Sbjct: 236 FGFEIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDI 295 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L AN P +F +GF+ G+K+SKS G I ++ + + LRY Sbjct: 296 VYFHALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRY 355 Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + +++ +D + D ++VN+DL + N+ SR I ++ + + A ++ Sbjct: 356 YFASKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSSTCAESDL 415 Query: 387 DESILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 +S + + E RE A+ ++++L ++Y D +KPW L K Sbjct: 416 VQSFIDAGDSIAAAYEARE------FSTAIREIMALADRANQYIDEKKPWALAKQEGQEQ 469 Query: 445 ST--VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSL 489 V V + + RQLA+ L + LA ++ D L V+ E FQ L Sbjct: 470 QVLDVCSVGINLFRQLAVYLAPVLSTLAQQVQDFLKLESFDFESRKQILVSHEIAQFQPL 529 Query: 490 DQRLKP 495 QR+ P Sbjct: 530 MQRVDP 535 >gi|319944052|ref|ZP_08018332.1| methionyl-tRNA synthetase [Lautropia mirabilis ATCC 51599] gi|319742813|gb|EFV95220.1| methionyl-tRNA synthetase [Lautropia mirabilis ATCC 51599] Length = 789 Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 144/522 (27%), Positives = 229/522 (43%), Gaps = 61/522 (11%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E+L+I+TA+ Y N HIGH E I AD+ RF R+ G DVLF D HG I AQ Sbjct: 69 ERLFITTALPYANGSFHIGHIMEYIQADIWVRFQRMLGKDVLFVGADDAHGAPIMLKAQA 128 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + V + + + IS+D + T + + +++++ G + Sbjct: 129 EGITPEELVARIAAERPYYLNGYHISFDHWHSTHSPENTALSQEIYRRLKAAGLVATRTI 188 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWM------ 160 ++ E + D + KG A QY +A NP + Sbjct: 189 EQFFDPVKEMFLPDRYI-KGECPNCHAKDQYGDACEVCSKVYAPTDLINPYSTLTGSTPV 247 Query: 161 --EEEGYFFRLS-----AYQDKLLSYYESHPEFIL---------PIERRNEVISFVKSGL 204 E YFF LS + L+ PE + + L Sbjct: 248 IRSSEHYFFSLSDPRCRQFLHDWLAQGRLQPEVANKAREWLGSDATDGEAAEGEGAGNPL 307 Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT------------GYLDNPDGSK 252 D +SR +GI IPD P YVW+DA YL + ++D G Sbjct: 308 ADWDISRDEPYFGIPIPDAPGKYFYVWLDAPVGYLASLKALCEKRGLDFDAFIDPQAGQD 367 Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312 + +H IGKDI+ FH ++WPA L A + P +F HGF+ GEK+SKS G + Sbjct: 368 PQRPYRQVHFIGKDIIYFHTLFWPAMLKFAGMHTPDNIFVHGFLTISGEKMSKSRGTGLS 427 Query: 313 PIEVIEEVGVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 P + + E+G++ LRY+L ++ +D ++ + RVN+DL + N+ SRS I Sbjct: 428 PKKYL-ELGMNPEWLRYYLAAKLNSRVEDVDFNAEDFVARVNSDLVGKLVNIASRSAGFI 486 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 LK +DG + T + + + L E+ E +A+ +++L V+++ D Sbjct: 487 LKRFDGRLAAASPATLAAFAESWPGADTLAELYEQRDYA---KAMRAIMALADRVNQFVD 543 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 A+KPWEL K +P + + + V + +R A L+ P L + Sbjct: 544 AEKPWELAK-DPAQTAKLHEVCSDALRGFAQLIALLAPVLPD 584 >gi|228910874|ref|ZP_04074683.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200] gi|228848825|gb|EEM93670.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200] Length = 544 Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 129/513 (25%), Positives = 237/513 (46%), Gaps = 45/513 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G DVL+ +G+D +G I A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEDVLYVSGSDCNGTPITIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F+ L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCKTCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKRDVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G +FW +D +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDHEFWNSDAQTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 +I WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K YDG++P E + + Sbjct: 358 INAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPKGTINVELKDKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + + + E ++ AL + V ++YFD ++PW+ ++ + +Y Sbjct: 418 ----EGLYKNVGEAIEQTKFKVALETIFDAVRFANKYFDERQPWKEREDDSVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 + +I A LL+ F+P + ++ + L + N Sbjct: 474 CIYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506 >gi|212550457|ref|YP_002308774.1| methionyl-tRNA synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548695|dbj|BAG83363.1| methionyl-tRNA synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 557 Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 146/510 (28%), Positives = 240/510 (47%), Gaps = 43/510 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M+ ++ I++A+ Y N HIGH A I AD+ AR+ RL G +VLF G+DEHG IA Sbjct: 1 MENYKRFLITSALPYANGPVHIGHLAGVYIPADIYARYLRLRGEEVLFIGGSDEHGVPIA 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G T + VD+ + + I++D + RT+ HH T ++ + DKG + Sbjct: 61 LKAREEGSTPQKVVDRYHHLIKKSFEDFGITFDIYSRTSSLIHHQTASEFFRHLYDKGKL 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWM----------- 160 + +Y + + D + YK A G + + M Sbjct: 121 VEKITGQYYDTHAKLFLADRYISGTCYLCGYKQAYGDQCESCGAFINAMDLLDPKSVITN 180 Query: 161 ------EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 E + ++ L Y + L + E H E+ + + S++++GL ++SR Sbjct: 181 TLPKVRETKHWYLPLDEYTEWLKKWILEEHREWKTNV--VGQCKSWLETGLFHRAVSRD- 237 Query: 214 FDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD--LHVIGKDI 267 DWGI +P ++YVW DA Y++ T ++ K+W P+ +H IGKD Sbjct: 238 LDWGIPVPIKGAEGKVLYVWFDAPIGYISNT--IEYSPNDWKKWWKDPSTKLVHFIGKDN 295 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324 + FH I +P L + LP V ++ F+ +GEKIS S + E +EE D Sbjct: 296 IVFHCIIFPVMLKAHEGYILPDNVPANEFLNLEGEKISTSRNWAVWLHEYLEEFPGQQDV 355 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L+ KDG + + R N +L +GN V+R + + K ++G +P G Sbjct: 356 LRYVLIANAPETKDGDFTWRDFQARNNNELVAILGNFVNRVLVLTHKYFEGKVPKLGELR 415 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHR-ALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 + D ++L R + I EN Q R AL + +SLV ++Y + W+ + + R Sbjct: 416 DYDRNVLEKFFRS-KIILENYLGQYHFRDALKEAMSLVRIGNKYLTDTEAWKTARKDIFR 474 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +TVL V +++I L I+ + F+P +KI Sbjct: 475 TATVLNVALQMIVNLTIVFEPFLPFTVDKI 504 >gi|325299462|ref|YP_004259379.1| Methionyl-tRNA synthetase [Bacteroides salanitronis DSM 18170] gi|324319015|gb|ADY36906.1| Methionyl-tRNA synthetase [Bacteroides salanitronis DSM 18170] Length = 680 Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 139/512 (27%), Positives = 244/512 (47%), Gaps = 41/512 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL +VLF G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEEVLFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G T + VD+ RD IS+D + RTT K HHDT ++ + DKG+ Sbjct: 63 RAKKEGCTPQDIVDRYHTLIRDSFKEFGISFDVYGRTTSKVHHDTASAFFRTLYDKGEFV 122 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG-----ADGQY------YNAQHNPVQWM--------- 160 + +Y + + D + A+G Y + +P + + Sbjct: 123 EKTSMQYYDEEAKTFLADRYITGECPRCHAEGAYGDQCEKCGSTLSPTELINPKSAISGS 182 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + ++ L+ ++ L + E H E+ + + S++ GL+ ++SR Sbjct: 183 QPVMKETKHWYLPLNKHEAWLRQWILEDHKEWRPNV--YGQCKSWLDMGLQPRAVSRD-L 239 Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDIL 268 DWGI +P + ++YVW DA Y++ T L PD S K+W +H IGKD + Sbjct: 240 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLVHFIGKDNI 297 Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDAL 325 FH I +PA L + + LP V ++ F+ +G+KIS S + E +++ D L Sbjct: 298 VFHCIVFPAMLKAEGSYILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVL 357 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 RY L KD + + R N +L GN V+R++ + K ++G +P G + Sbjct: 358 RYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFEGKVPACGELND 417 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 D + L + V ++ + + A + ++L ++Y +PW+L KT+ DR + Sbjct: 418 YDRATLQEFADVKAQVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMDRVA 477 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 T+L + ++++ L+I + F+P + K+ +L Sbjct: 478 TILNIALQLVANLSIAFEPFLPFSSEKLRKML 509 >gi|54298874|ref|YP_125243.1| methionyl-tRNA synthetase [Legionella pneumophila str. Paris] gi|68565968|sp|Q5X105|SYM_LEGPA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|53752659|emb|CAH14094.1| methionyl-tRNA synthetase [Legionella pneumophila str. Paris] Length = 670 Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 140/547 (25%), Positives = 241/547 (44%), Gaps = 53/547 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M K+ +++A+ Y N H+GH E I D+ R H++ G+ + G D HG I Sbjct: 1 MTSERKMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIML 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + + + I YD + T + +++++ GDI Sbjct: 61 KAEQLGITPEALTAEIKLSHEKDFKAFAIDYDYYHTTHSPENQVLATTIFERLQAGGDIV 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM--------- 160 K +Y + + D V G + + A ++P + Sbjct: 121 KKTIRQFYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSVISGA 180 Query: 161 -----EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E E YFF L Y++ L + + H L E N++ + ++GLK +SR Sbjct: 181 SPVEKESEHYFFDLPLYEELLKDWTRKGH----LQAEVTNKLSEWFEAGLKQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268 +G IP P YVW+DA Y+ + Y D S +FW H +GKDI+ Sbjct: 237 YFGFPIPGVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKASKTELYHFVGKDIV 296 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FHA++WPA L ++ P V++HGF+ +G+K+SKS G I+ + + + LRY+ Sbjct: 297 YFHALFWPAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEYLRYY 356 Query: 329 LVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 ++ G+ D + D RVNADL + N+ SR I K +D + + + Sbjct: 357 FAAKLN-GRVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRLSSELNDPKL 415 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444 +LS V+ + ++ RA+ Q++ +V++Y DA KPW L K + + Sbjct: 416 HNDLLSARESVI----DAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESKLNEV 471 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--T 502 + + + + R L L+ +P +A + F+ E + S+D+ L + H+ T Sbjct: 472 HAICTMGINLFRILITYLKPVLPMMAKASEE--FLNSEPLHWGSIDKPL----LNHRINT 525 Query: 503 FDPIFPR 509 F P+ R Sbjct: 526 FKPLMVR 532 >gi|192359290|ref|YP_001981505.1| methionyl-tRNA synthetase [Cellvibrio japonicus Ueda107] gi|190685455|gb|ACE83133.1| methionyl-tRNA synthetase [Cellvibrio japonicus Ueda107] Length = 679 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 125/499 (25%), Positives = 228/499 (45%), Gaps = 44/499 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQN 64 K+ +++A+ Y N H+GH E I D+ RF ++ G+D + D HG I KA Q Sbjct: 11 KILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMRGVDCTYVCADDAHGTAIMLKAEQL 70 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + + + + D A +I +D++ T + + ++++++ G I Sbjct: 71 GHSPEQQIANVKAEHEADFA-AFNIGFDNYHSTHSDENRELSTLIYERLKANGHIATRGI 129 Query: 125 SGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM------------- 160 + Y + + D E G + + A ++P+ + Sbjct: 130 TQAYDPEKQLFLADRYIKGTCPKCKSEDQYGDNCEKCGATYSPMDLINPKSAISGATPVA 189 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E +FF L A+ D L ++ + L E N++ ++ +GL++ +SR +G + Sbjct: 190 RESEHFFFTLPAFSDFLKAWTRAGH---LQDEVANKMAEWLDAGLQEWDISRDAPYFGFE 246 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAI 273 IP +P YVW+DA Y+ + L + G ++W D H IGKDI+ FHA+ Sbjct: 247 IPGEPGKYFYVWLDAPIGYIASLKNLLDKQGKDWYEYWKPDSTTEVYHFIGKDIVNFHAL 306 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L SANL P K+ HGF+ G K+SKS G I+ + + + LRY+ ++ Sbjct: 307 FWPAMLHSANLRTPSKICVHGFLTVNGTKMSKSRGTFINARTYLNYLNPEYLRYYFAAKL 366 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + + +RVN+DL + N+ SR+ I + G++ A +D ++ Sbjct: 367 TSNVDDIDLNLEDFIQRVNSDLVGKVVNIASRTAKFI-TNAGGVL----ASNLADPALWQ 421 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT- 451 + I + +++ +A+ ++++L + Y Q+PW+L K A T + T Sbjct: 422 QFVDAGETIASHYESRDYSKAMREIMALADAANEYIATQEPWKLAKQAGAEAQTQVVCTL 481 Query: 452 -VEVIRQLAILLQAFVPKL 469 + + R + L+ VP L Sbjct: 482 GINMFRAILTYLKPVVPAL 500 >gi|149280091|ref|ZP_01886215.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Pedobacter sp. BAL39] gi|149229105|gb|EDM34500.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Pedobacter sp. BAL39] Length = 716 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 137/529 (25%), Positives = 241/529 (45%), Gaps = 67/529 (12%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 ++ A+ Y N HIGH A + AD R+ R + DV F G+DE+G I A+ GV Sbjct: 25 VTAALPYTNGPVHIGHLAGVYLPADTYVRYLRSNKRDVKFICGSDENGVPITLKAKKEGV 84 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + VD+ D +S+D + RT+ HH T ++ + +KG + + Sbjct: 85 TPQEIVDKYHEIIGDSFKEFGVSFDIYHRTSSLMHHQTASDFFENLYEKGVFTEEVTEQY 144 Query: 128 YSLRDEAYYNDDEVYK-----GADGQYYNAQHN---------------------PVQWME 161 Y + + + D + G + Y + N PV+ E Sbjct: 145 YDEKAQTFLADRYITGTCPKCGNENAYGDQCENCGSTLNATDLINPKSTLSGEKPVR-KE 203 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRN---EVISFVKSGLKDLSLSRKTFDWGI 218 + +F L Y+D+L +Y E H E+ R N + S++ +GL+ +++R DWG+ Sbjct: 204 TKNWFLPLDKYEDQLRTYIEGHKEW-----RPNVYGQCQSWLNAGLQPRAMTRD-LDWGV 257 Query: 219 KIP--DDPQYIMYVWIDALTNYLTTT------GYLD--NPD-------------GSKAKF 255 ++P D ++YVW DA Y++ T LD NP G+ + Sbjct: 258 RVPVKDAEGKVLYVWFDAPIGYISATKELFEYARLDVWNPKSEEYYINKNTLTKGNWEDY 317 Query: 256 WPAD----LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNV 310 W + +H IGKD + FH + +PA L++ + L V ++ F+ +G+KIS S Sbjct: 318 WKDENTKLVHFIGKDNIVFHCVIFPAMLMAHGDYTLADNVPANEFLNLEGQKISTSKNWA 377 Query: 311 IDPIEVIEEVG--VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 + E + E D LRY L KD + + R N +L +GN ++R V + Sbjct: 378 VWLNEYLTEFKGQQDVLRYVLTATAPETKDNDFTWKDFQARNNNELVAILGNFINRVVVL 437 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428 K + G +P D+ ++ + I +++N AL +V+++ ++Y Sbjct: 438 THKYFGGKVPMLMEVKPEDQQVIDELAEYPARISASIENYRFREALMEVMNVARLGNKYL 497 Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +PW++ KT+ DR T+L +++++ L IL++ F+P A+K+ +L Sbjct: 498 ADMEPWKVIKTDEDRVRTILNISLQIAANLEILIEPFLPFTADKLMKML 546 >gi|322369925|ref|ZP_08044487.1| methionyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] gi|320550261|gb|EFW91913.1| methionyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] Length = 692 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 125/511 (24%), Positives = 225/511 (44%), Gaps = 50/511 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E ++ + Y N + HIGH + DV +R G F +G+D HG +A A+ Sbjct: 9 EEPAVVTCGLPYANGELHIGHLRTYVGGDVYSRALETLGQQTAFVSGSDMHGTPVAVNAE 68 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY-KG 122 GV+ + F ++ + DI +D++ T ++ + + + + +K+ ++G IY K Sbjct: 69 KEGVSPREFALRHHDKYEATFPKFDIEFDNYGHTDDETNTELTQEIVRKLDEEGYIYEKE 128 Query: 123 CYSGWYSLRDE---------------AYYNDDEVYKGADGQYYNAQH----------NPV 157 W + D+ A+ DE +G G++ NP Sbjct: 129 IKVAWDPIEDDPLPDRYVEGTCPYCGAHARGDECDEGC-GRHLEPGEIEDPTSIRTGNPA 187 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 ++ E FFR+S Q+ L + + +N+ +++ L+D +SR DWG Sbjct: 188 EYRERTHKFFRVSELQEYLQGFIDR---LEGTSNAKNQPREWIEGELQDWCISRD-MDWG 243 Query: 218 IKIPDD------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-------LHVIG 264 I P D ++YVW+DA Y+ +T G+ W +H+IG Sbjct: 244 IDYPGDEGDEASEDLVLYVWVDAPIEYIASTKQYTERVGADTYDWEEPWKDAGEIVHIIG 303 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 +DI++ H ++WPA L A P+ V + GF+ G+ S S + + ++E D Sbjct: 304 RDIIQHHTVFWPAMLHVAEYNEPRAVMASGFVNLNGKGFSTSRNRAVWADDYLDEGFAPD 363 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 LRY+L +D + D ++RVN +L +GN V RS+ ++YDG P A Sbjct: 364 LLRYYLATNGGFQQDVDFSWDRFQERVNGELVGTVGNFVYRSLLFAARNYDG---APDA- 419 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 E+ + + + E + + I +L + + Y +PW+L +P+R Sbjct: 420 -ETSDEVRERIEDAIDEFTAAVNDYSIKDLGDAATALAAFGNEYIQRNEPWKLTDEDPER 478 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 A V+Y V++ + LA+L + +P A ++ Sbjct: 479 AEQVIYDCVQLSKALAVLFEPILPGKAETLW 509 >gi|307825405|ref|ZP_07655624.1| methionyl-tRNA synthetase [Methylobacter tundripaludum SV96] gi|307733580|gb|EFO04438.1| methionyl-tRNA synthetase [Methylobacter tundripaludum SV96] Length = 672 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 130/505 (25%), Positives = 231/505 (45%), Gaps = 42/505 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +R K+ +++A+ Y N H+GH E I D+ RF + G + D HG I Sbjct: 1 MSDR-KILVTSALPYANGPIHLGHLVEYIQTDIWVRFQKQRGNLCYYVCADDTHGTPIML 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A G+T + + Q + +++D++ T + + ++++++ D G I Sbjct: 60 RADREGITPEQLIAQVGKEHLADFTEFSVAFDNYHSTHSEENKALSSLVYERLRDAGHIS 119 Query: 121 KGCYSGWYSLRDEAYYND----DEVYK-GADGQYYNA------QHNPVQWM--------- 160 + + + +D E K GA QY + + P + Sbjct: 120 SRTITQAFDPVKNMFLSDRFIKGECPKCGAADQYGDGCEVCGTTYAPTELKNAVSAISGA 179 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 + YFF L+ + D L + +H + P E N++ ++ GL+ +SR Sbjct: 180 KPVDKDSVHYFFDLANFSDMLREW--THAGHLQP-EVSNKLAEWLDGGLQQWDISRDAPY 236 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILR 269 +G +IPD P YVW+DA Y+ + L + G +FW A+L H IGKDI+ Sbjct: 237 FGFEIPDAPGKYFYVWLDAPIGYMASFKNLCDKQGLDFNEFWSKNSDAELYHFIGKDIIY 296 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FHA++WPA L A+ P +F+HGF+ GEK+SKS G I ++ + + LRY+ Sbjct: 297 FHALFWPAMLSGAHFRTPSAIFAHGFLTVNGEKMSKSRGTFIKARTYLDHLNPEYLRYYF 356 Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ G D + D +RVN+DL + N+ SR I K +D + S++ Sbjct: 357 AAKLSAGVDDLDLNFDDFSQRVNSDLVGKVVNIASRCSGFIAKRFDNRLSEQC----SEQ 412 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRAST 446 ++ +I E + + +A+ ++++L + ++Y D +KPW + K Sbjct: 413 ALFHEFVTANTQIAELYEAREFGKAMREIMALADKANQYIDEKKPWLIAKEEGKDQELHE 472 Query: 447 VLYVTVEVIRQLAILLQAFVPKLAN 471 V + + + R LA+ L+ +P LA Sbjct: 473 VCTMGLNLFRLLAVYLKPVIPVLAG 497 >gi|227494721|ref|ZP_03925037.1| methionine--tRNA ligase [Actinomyces coleocanis DSM 15436] gi|226831721|gb|EEH64104.1| methionine--tRNA ligase [Actinomyces coleocanis DSM 15436] Length = 564 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 138/486 (28%), Positives = 219/486 (45%), Gaps = 56/486 (11%) Query: 40 LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99 + G DVL +GTDEHG I AA G+T + D+N+R + L +SYD F RTT Sbjct: 1 MQGHDVLMVSGTDEHGTPILVAADGKGITPRQLADENNRLIVEDLVQLGLSYDLFTRTTT 60 Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY--------KGADGQYYN 151 H+ + +++ + D G + G S D + GA G + Sbjct: 61 GNHYQVVQAMFEVVRDNGYMLVQTTHGAISPSTGRTLPDRYIEGTCPICGDPGARGDQCD 120 Query: 152 AQHN---------PV--------QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194 + N PV +++E + YF L L ++ + + R Sbjct: 121 SCGNQLDPTDLINPVSRINGETPKFIETDHYFLDLPGLAGALSAWLDDREK---SGTWRP 177 Query: 195 EVISFVKSGLKDLSLSRKT--FDWGIKIP---DDPQYIMYVWIDALTNYLTTTGYLDNPD 249 VI F ++ L+D+ T DWGI +P D P +YVW DA+ YL+ + Sbjct: 178 NVIKFSQNFLEDIRPRAMTRDIDWGIPVPGWEDQPSKRLYVWFDAVVGYLSASIEWARRS 237 Query: 250 GSKA---KFW--PADL--HVIGKDILRFHAIYWPAFLLS--------------ANLPLPK 288 G K+W P L + +GKD + FH+ WPA +L L LP Sbjct: 238 GDPEAWRKWWNDPEALSYYFMGKDNIVFHSQIWPAEILGYNGGGDKGGEPGPFGQLNLPT 297 Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348 +V S F+ +G K + S G VI +++ DALRYF+ D + + Sbjct: 298 EVVSSEFLTMEGRKFASSRGIVIYVRDMLSRYQADALRYFISAAGPESSDADFTWAEFVR 357 Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408 R N++L G GNLV+R+ SMI K + G IP PG E D+++L+ + E+ + + Sbjct: 358 RTNSELVAGWGNLVNRAASMINKRF-GEIPQPGQLEEIDQALLNQLADGFAEVGQLIGTH 416 Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 A+A V+ LV E ++Y +P++LK + +R +T+L+ + + L ++ F+P Sbjct: 417 RQKAAIAAVMRLVGEANKYVADTEPFKLKDPSQEERLATILWTLAQAVSDLNTMMSPFLP 476 Query: 468 KLANKI 473 AN I Sbjct: 477 HSANAI 482 >gi|119775184|ref|YP_927924.1| methionyl-tRNA synthetase [Shewanella amazonensis SB2B] gi|187647769|sp|A1S798|SYM_SHEAM RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|119767684|gb|ABM00255.1| methionyl-tRNA synthetase [Shewanella amazonensis SB2B] Length = 675 Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 130/511 (25%), Positives = 236/511 (46%), Gaps = 47/511 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ +RF +L G + + D HG I AQ Sbjct: 5 QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLKAQ 64 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + + Q N + +D AD ++++D++ T + ++ K+ D G I Sbjct: 65 QLGMAPEEMIAQVNVEHQQDFAD-FNVAFDNYHSTHSDENRALASEIYLKLRDGGYIKSK 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160 S + +++ + D KG ++ QY A ++P + + Sbjct: 124 TISQLFD-PEKSMFLPDRFVKGTCPKCKSEDQYGDNCDACGATYSPTELINPRSAVSGAT 182 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 E E +FF L A++ L ++ S L E N++ + + GL+ ++R + Sbjct: 183 PVMKETEHFFFDLPAFEGMLKAWTRSG---ALQSEMANKLDEWFEQGLQQWDITRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTT-TGYLDN-PDGSKAKFWPAD-----LHVIGKDILR 269 G +IPD P YVW+DA Y+ + + D D + +FW D H IGKDI+ Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNFCDKRGDINFDEFWAKDSSAEVYHFIGKDIVY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH+++WPA L A P V++HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 FHSLFWPAMLHGAGFRQPSSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +RVN+DL + NL SR+ I K +DG + +D+ Sbjct: 360 AAKLSARIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLA-----AVADK 414 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446 S++ I E + + +A+ ++++L + + PW+L K + + A Sbjct: 415 SLIDSFLAKQDVIAELYEAREYGKAMREIMALADVANGFVADAAPWQLVKQDDKQEEAHQ 474 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V + + R L L+ +P+LA + D Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLAKDVEDFF 505 >gi|265752983|ref|ZP_06088552.1| methionyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA] gi|263236169|gb|EEZ21664.1| methionyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA] Length = 680 Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 142/510 (27%), Positives = 239/510 (46%), Gaps = 51/510 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I A+ G+ Sbjct: 10 VTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGI 69 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + VD+ ++ IS+D + RTT K HH+ +K + DK + + + Sbjct: 70 TPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKSEFIEKTSMQY 129 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQHNPVQWME 161 Y + D + + A+G Y + + PV E Sbjct: 130 YDEEAHQFLADRYIIGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGSQPVM-RE 188 Query: 162 EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLSRKTFDWG 217 + ++ L ++ L + E+H E+ R N + S++ GL+ ++SR DWG Sbjct: 189 TKHWYLPLDKHEGWLREWILENHKEW-----RPNVYGQCKSWLDMGLQPRAVSRD-LDWG 242 Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270 I +P + ++YVW DA Y++ T L PD + W D +H IGKD + F Sbjct: 243 IPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFIGKDNIVF 299 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327 H I +PA L + + LP V S+ F+ +G+KIS S + E +++ D LRY Sbjct: 300 HCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLRY 359 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L KD + + R N +L GN V+R++ + K +DG +P G T+ D Sbjct: 360 VLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPVCGELTDYD 419 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 + L + V E+ + + A + ++L ++Y +PW+L KT+ DR +T+ Sbjct: 420 KETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMDRVATI 479 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L + ++++ LAI + F+P + K+ +L Sbjct: 480 LNIALQLVANLAIAFEPFLPFSSEKLRQML 509 >gi|237711556|ref|ZP_04542037.1| methionyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA] gi|229454251|gb|EEO59972.1| methionyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA] Length = 680 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 142/510 (27%), Positives = 239/510 (46%), Gaps = 51/510 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I A+ G+ Sbjct: 10 VTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGI 69 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + VD+ ++ IS+D + RTT K HH+ +K + DK + + + Sbjct: 70 TPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKSEFIEKTSMQY 129 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQHNPVQWME 161 Y + D + + A+G Y + + PV E Sbjct: 130 YDEEAHQFLADRYIIGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGSQPVM-RE 188 Query: 162 EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLSRKTFDWG 217 + ++ L ++ L + E+H E+ R N + S++ GL+ ++SR DWG Sbjct: 189 TKHWYLPLDKHEGWLREWILENHKEW-----RPNVYGQCKSWLDMGLQPRAVSRD-LDWG 242 Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270 I +P + ++YVW DA Y++ T L PD + W D +H IGKD + F Sbjct: 243 IPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFIGKDNIVF 299 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327 H I +PA L + + LP V S+ F+ +G+KIS S + E +++ D LRY Sbjct: 300 HCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLRY 359 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L KD + + R N +L GN V+R++ + K +DG +P G T+ D Sbjct: 360 VLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPVCGELTDYD 419 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 + L + V E+ + + A + ++L ++Y +PW+L KT+ DR +T+ Sbjct: 420 KETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMDRVATI 479 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L + ++++ LAI + F+P + K+ +L Sbjct: 480 LNIALQLVANLAIAFEPFLPFSSEKLRQML 509 >gi|255534689|ref|YP_003095060.1| methionyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10] gi|255340885|gb|ACU06998.1| Methionyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10] Length = 677 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 135/513 (26%), Positives = 236/513 (46%), Gaps = 43/513 (8%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E+ I+ A+ Y N HIGH A I ADV ARF R G DV F G+DEHG I A+ Sbjct: 3 ERKMITAALPYANGPVHIGHLAGVYIPADVYARFQRRLGRDVAFICGSDEHGIPITIRAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT + VD+ + L IS+D++ RTT K+H++ + + + +KG + Sbjct: 63 KEGVTPQDIVDKYHEIIKKSFADLGISFDEYSRTTSKKHYEVSQDFFATLFNKGKFAEEV 122 Query: 124 YSGWYSLRDEAYYND-----------------DEVYKGADGQYYNAQHNPVQWM------ 160 ++ + + D D+ K + NP + Sbjct: 123 SEQYFDEQAGEFLADRYIVGTCPNCSNDNAYGDQCEKCGSTLSPSELINPKSMLSGNVPI 182 Query: 161 --EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 E + ++ L+ Y++ L + E H P +V S++ GLK +++R +WG Sbjct: 183 LKETKNWYLPLNEYENFLNEWIIEGHKNDWKP-NVYGQVKSWLTDGLKSRAMTRD-LNWG 240 Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRF 270 + +P D ++YVW DA Y++ T +G K +W + +H IGKD + F Sbjct: 241 VPVPLPDAEGKVLYVWFDAPIGYISFTQEWAEKNGKDWKDYWQNENSDLVHFIGKDNIVF 300 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327 H I +PA + + + +P V + F+ + +KIS S + E +EE D LRY Sbjct: 301 HCIIFPAMMKAHGDYKMPTNVPAFEFLNLENDKISTSRNWAVWAHEYVEEFPGQQDVLRY 360 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L+ KD + + + N++L GN ++R +I K YDG++P Sbjct: 361 ALLSSAPETKDNNFTWKDFQTKNNSELVGIFGNFINRVAVLIHKYYDGIVPQ----GNEQ 416 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 L S+ EI ++ AL+ +++L +++ ++PW+ K NP++A+ Sbjct: 417 APELHEISKAASEIESYLERYEFRNALSSMMNLARFGNQFLQTEEPWKTIKDNPEKAANS 476 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 L++ ++ LA + + F+P ++K+ + V+ Sbjct: 477 LFIGAQIAVGLAQICEPFLPFSSDKLLKMFNVS 509 >gi|168213447|ref|ZP_02639072.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|170714987|gb|EDT27169.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] Length = 514 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 128/495 (25%), Positives = 231/495 (46%), Gaps = 29/495 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ I A Y N HIG I D+LAR+HR G +V+F +G+D HG I A+ Sbjct: 2 KVIIGNAWPYANGSLHIGRVSSWIAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + + +++ R F + L S++ F RT + H + + K + +KG IY+ Sbjct: 62 NKSPEELINKYHREFVRCFNKLGFSFNIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD---KLLSYYES 182 +Y + ++ + +G N ++ V+ FF+LS +QD +L ES Sbjct: 122 EFYCPKCCDTLDEFGIKEGL----CNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQYIMYVWIDALTNY 238 E + I +R +++ GL+D L+R+ +WGI++P +D + +YVWIDAL Y Sbjct: 178 WRENAIKITKR-----YLEGGLRDKILTRE-INWGIEVPIEGFEDKR--VYVWIDALLAY 229 Query: 239 LTTTGYLDNPDG-SKAKFWPADLHVI----GKDILRFHAIYWPAFLLSANLPLPK-KVFS 292 +T + + G S ++W + I GK+ + FH +PA L L + ++FS Sbjct: 230 VTASKKVIEEKGQSLEEYWNNEDSRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFS 289 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 ++ +G+ S + I ++E +D++RY+L+ A K+ + N Sbjct: 290 SQYLTLEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNN 349 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 +L IGN +R ++ I K+++G I E ++ R + +N + Sbjct: 350 ELVGEIGNFTNRVLTFIKKNFNGQIKGE----ELPLQWKNIIRRTYASVGNKFENGELKS 405 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + ++ +L+ + + +FD KPW L N + VLY+ +++ L L+ +P K Sbjct: 406 GVKEMFNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICSQILVALTDLMNPIIPFTCEK 465 Query: 473 IFDILFVADENRCFQ 487 I L + D F+ Sbjct: 466 IKMFLGIKDTKWSFE 480 >gi|24374161|ref|NP_718204.1| methionyl-tRNA synthetase [Shewanella oneidensis MR-1] gi|68566007|sp|Q8EDX2|SYM_SHEON RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|24348665|gb|AAN55648.1|AE015703_10 methionyl-tRNA synthetase [Shewanella oneidensis MR-1] Length = 676 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 127/507 (25%), Positives = 235/507 (46%), Gaps = 47/507 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ +R+ +L G + + D HG I AQ Sbjct: 5 QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + + Q N + +D AD +I++D++ T + + ++ K+ G I Sbjct: 65 QLGMAPEEMIAQVNKEHQQDFAD-FNIAFDNYHSTHSEENRVLASDIYLKLRANGYIKSK 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160 S + +++ + D KG + QY A ++P + + Sbjct: 124 SISQLFD-PEQSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAVSGAT 182 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + E +FF L A++D L + S L E N++ + + GL+ ++R + Sbjct: 183 PVMKDTEHFFFDLPAFEDMLKEWTRSG---ALQTEMANKLDEWFEQGLQQWDITRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269 G +IPD P YVW+DA Y+ + L P+ S +FW D H IGKDI+ Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRPELSFDEFWAKDSKAEVYHFIGKDIVY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH+++WPA L + P V++HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 FHSLFWPAMLYGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +RVN+DL + NL SR+ I K +DG + +D Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKI-----TDT 414 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446 ++ V ++I E + + +A+ ++++L + + PW++ K + + A Sbjct: 415 TLTEVFLAKQEQIAEFYETREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAHQ 474 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKI 473 V + + R L L+ +P+LA + Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLAQDV 501 >gi|327479892|gb|AEA83202.1| methionyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166] Length = 679 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 136/524 (25%), Positives = 233/524 (44%), Gaps = 60/524 (11%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E ++ +++A+ Y N H+GH E I D+ RF +L G ++ D HG I Sbjct: 1 MSEARQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D AD L +++D+F T + + +++ ++ D G I Sbjct: 61 RAEKEGITPEQLIANVQAEHSADFADFL-VNFDNFHSTHSPENRELAELIYTRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164 + ++ ++ + D KG A+ QY A + P + + Sbjct: 120 ATRSVTQYFD-PEKGMFLADRFIKGTCPRCAAEDQYGDNCEKCGATYEPTELKDPRSAIS 178 Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 +FF+L ++ L + L N++ ++ GL++ +SR Sbjct: 179 GATPVLKDSKHFFFKLPDFEAMLKEWTRGG---ALQESVANKIAEWLDGGLQEWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWP----ADL-HVIGKD 266 +G +IP +P YVW+DA Y+ + L P+ S FW A+L H IGKD Sbjct: 236 PYFGFEIPGEPGKYFYVWLDAPIGYMASFQNLCKRRPELSFDAFWSKESSAELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FH ++WPA L A P V HG++ G+K+SKS G I ++ + + LR Sbjct: 296 IINFHTLFWPAMLEGAGFRKPTAVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLR 355 Query: 327 YFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTP- 380 Y+ ++ G D + D ++VN+DL + N+ SR I K DG++ P P Sbjct: 356 YYYASKLGRGVDDLDLNLDDFVQKVNSDLVGKVVNIASRCAGFIHKGNDGVMVEANPEPE 415 Query: 381 --GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 AF + SI E R+ RA+ ++++L + + + PW L K Sbjct: 416 LWAAFQAAAPSIADA-----YEARD------FARAMREIMALADRANAWIADKAPWALNK 464 Query: 439 TNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +A + + V + RQL I L+ +P LA L VA Sbjct: 465 VEGKQAEVQEICALGVNLFRQLVIFLKPVLPNLATAAEQFLNVA 508 >gi|296108530|ref|YP_003620231.1| methionyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] gi|295650432|gb|ADG26279.1| methionyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] Length = 664 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 142/545 (26%), Positives = 238/545 (43%), Gaps = 61/545 (11%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + +++A+ Y N H+GH E I D+ R H++ G+ + G D HG I A+ G Sbjct: 1 MLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIMLKAEQLG 60 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + + + I YD + T + +++++ GDI K Sbjct: 61 ITPEALTAEIKLSHEKDFKAFAIDYDYYHTTHSPENQALATTIFERLQAGGDIVKKTIRQ 120 Query: 127 WYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQW--------------ME 161 +Y + + D V G + + A ++P ME Sbjct: 121 FYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSVISGASPVEME 180 Query: 162 EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E YFF L Y++ L + + H L E N++ + ++GLK +SR +G I Sbjct: 181 SEHYFFDLPRYEELLKDWTRKGH----LQTEVTNKLSEWFEAGLKQWDISRDAPYFGFPI 236 Query: 221 PDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274 P P YVW+DA Y+ + Y D S +FW H +GKDI+ FHA++ Sbjct: 237 PGVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKASKTELYHFVGKDIVYFHALF 296 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L ++ P V++HGF+ +G+K+SKS G I+ + + + LRY+ ++ Sbjct: 297 WPAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEYLRYYFAAKLN 356 Query: 335 CGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 G+ D + D RVNADL + N+ SR I K +D + S E I Sbjct: 357 -GRVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRL--------SSELINQ 407 Query: 393 VCSRVLQEIRENMQNQLIH----RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446 L RE + + + RA+ Q++ +V++Y DA KPW L K + + Sbjct: 408 KLYNDLLSAREFVIDAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESKLNEVHA 467 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--TFD 504 + + + + R L L+ +P +A + F+ E + S+D+ L + H+ TF Sbjct: 468 ICTMGINLFRILITYLKPVLPMMAKASEE--FLNSEPLHWGSIDKPL----LNHRINTFK 521 Query: 505 PIFPR 509 P+ R Sbjct: 522 PLMVR 526 >gi|110803500|ref|YP_699779.1| methionyl-tRNA synthetase [Clostridium perfringens SM101] gi|110684001|gb|ABG87371.1| methionine--tRNA ligase [Clostridium perfringens SM101] Length = 514 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 129/495 (26%), Positives = 228/495 (46%), Gaps = 29/495 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ I A Y N HIG + D+LAR+HR G +V+F +G+D HG I A+ Sbjct: 2 KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + + +++ R F + L S+D F RT + H + + K + DKG IY+ Sbjct: 62 NKSPEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYDKGFIYEKETE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD---KLLSYYES 182 +Y + DE G + N ++ V+ FF+LS +QD +L ES Sbjct: 122 EFYCQK--CCDTLDEF--GVEDGLCNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQYIMYVWIDALTNY 238 E + I +R ++ GL+D ++R+ +WGI++P +D + +YVWIDAL Y Sbjct: 178 WRENAIKITKR-----YLDGGLRDKIVTRE-INWGIEVPVEGFEDKR--VYVWIDALLAY 229 Query: 239 LTTTGYLDNPDG-SKAKFWPADLHVI----GKDILRFHAIYWPAFLLSANLPLPK-KVFS 292 +T + + G S ++W + I GK+ + FH +PA L L + ++FS Sbjct: 230 VTASKKVIEEKGQSLEEYWNNEDSRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFS 289 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 ++ +G+ S + I ++E +D++RY+L+ A K+ + N Sbjct: 290 SQYLTLEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNN 349 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 +L +GN +R ++ I K+++G I + I+ R + +N Sbjct: 350 ELVGELGNFTNRVLTFIKKNFNGEIKREELPLQWKNIII----RTYASVGNKFENGEFKS 405 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + ++ +L+ + + +FD KPW L N + VLY+ +++ L L+ +P K Sbjct: 406 GVKEIFNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICAQILVALTDLMNPIIPFTCEK 465 Query: 473 IFDILFVADENRCFQ 487 I L + D F+ Sbjct: 466 IKMFLGIKDTKWSFE 480 >gi|42784223|ref|NP_981470.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|68565988|sp|Q72Y44|SYM1_BACC1 RecName: Full=Methionyl-tRNA synthetase 1; AltName: Full=Methionine--tRNA ligase 1; Short=MetRS 1 gi|42740154|gb|AAS44078.1| methionyl-tRNA synthetase, putative [Bacillus cereus ATCC 10987] Length = 544 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 129/513 (25%), Positives = 236/513 (46%), Gaps = 45/513 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F+ L +YD + RT + HH T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFQRCFRNLGFTYDCYTRTDSEHHHKTVQKVFLRLLEEGHIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSAPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E+ + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKVAVETAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G +FW + +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGKDDQEFWDREAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 +I WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SIIWPAVLLGIGEGTIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + I Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIDVELKDKI 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALEAIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V +I LL+ F+P + ++ + L + N Sbjct: 474 CVYLIANFVNLLEPFLPFSSERVRNTLSIVKRN 506 >gi|296135470|ref|YP_003642712.1| methionyl-tRNA synthetase [Thiomonas intermedia K12] gi|295795592|gb|ADG30382.1| methionyl-tRNA synthetase [Thiomonas intermedia K12] Length = 725 Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 150/576 (26%), Positives = 243/576 (42%), Gaps = 86/576 (14%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + + +++TA+ Y N HIGH E I AD RF R+ G +V F D HG I Sbjct: 1 MTSKRRFFVTTALPYANGPFHIGHIMEYIQADTWVRFQRMQGHEVHFVGADDAHGAPIMI 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--- 117 AA+ AG T + FV + D I +D++ T +H + +++ + G Sbjct: 61 AAEKAGKTPQQFVADIAAGRAQYLDGFHIRFDNWHNTDAPENHQLAQDIYRALRKNGLIA 120 Query: 118 --------DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ------HNPVQW---- 159 D KG + L D Y GA QY +A + P + Sbjct: 121 MRDIEQFFDPVKGMF-----LPDR-YIKGQCPKCGAADQYGDACEVCGAVYAPTELKHPY 174 Query: 160 ----------MEEEGYFFRLSAYQDKLLSYYE-------SHPEFILPIERRNEVISFVKS 202 + E YFF+LS+ D+ Y +H + L E N+V + + Sbjct: 175 STLSGATPELRKSEHYFFQLSS--DRCADYLRDWTQATNAHGQPHLQTEVLNKVREWFTT 232 Query: 203 ------GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKF 255 GL D +SR +GI+IPD P YVW+DA YL + + D G A+ Sbjct: 233 DENGHGGLADWDISRDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNHFDK--GQAAQH 290 Query: 256 WPA------------------DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 W A +H IGKDI+ FH ++WPA L + P ++ HGF+ Sbjct: 291 WHAPSRTAQSFDAFVADPAVEQVHFIGKDIVYFHTLFWPAMLHFSGRKTPSQINVHGFVT 350 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADL 354 GEK+SKS G I P++ + ++G++ LRY+L ++ +D + + RVN+DL Sbjct: 351 VGGEKMSKSRGTGISPLKYL-DIGLNPEWLRYYLAAKLTARVEDVDFTPEDFVARVNSDL 409 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N+ SR+ I + +DG + + + + + ++ + + RAL Sbjct: 410 IGKYVNIASRAAKFISQYFDGKL----GYAHNTGDLRDAAKALADDVAAAFEAREYARAL 465 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANK 472 ++++ ++ FDA +PW L K RA + L+++L +P L + Sbjct: 466 REIMAYADRINTAFDAAQPWILAKDEARRAELQDACSQALAGFWLLSVMLSPVLPALTAR 525 Query: 473 IFDILFVADENRCFQ---SLDQRLKPGFMLHKTFDP 505 + LF + + + L Q P L DP Sbjct: 526 VARELFGLERDFVWSDATELPQHAAPYQHLMHRIDP 561 >gi|46190591|ref|ZP_00121331.2| COG0143: Methionyl-tRNA synthetase [Bifidobacterium longum DJO10A] Length = 595 Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 141/503 (28%), Positives = 234/503 (46%), Gaps = 65/503 (12%) Query: 31 ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF-RDMADVLDI 89 +DV AR+ R+ G DVL +GTDEHG I A+ G+T + ++ +R +D+ D L + Sbjct: 3 SDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGLTAQELANRYNRVIAKDLCD-LGL 61 Query: 90 SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY------SGWYSLRDEAYYNDDEVY- 142 SYD F RTT H + ++K+ + G IYKG S +L D + + Sbjct: 62 SYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQQVAISPSTGRTLPDRYIEGECPICH 121 Query: 143 -KGADGQYYNAQHN---------PV--------QWMEEEGYFFRLSAYQDKLLSYYESHP 184 +GA G +A N PV ++ + E YF L A + ++ E+ Sbjct: 122 AEGARGDQCDACGNELDPDELINPVSKINGETPRFEQTEHYFLDLPALAEANKAWLETRK 181 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIP-----DDPQYIMYVWIDALTN 237 + R VI+F K++ T DWGI +P D+P +YVW DA+ Sbjct: 182 GW------RTNVINFSLGLFKEVKPRAITRDIDWGIPVPVKDWIDNPNKKLYVWFDAVIG 235 Query: 238 YLTTTGYLDNPDGSKAKF--WPAD-----LHVIGKDILRFHAIYWPAFLLSAN------- 283 YL+ + G K+ W D + +GKD + FH+ WP+ +L+ N Sbjct: 236 YLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDNITFHSQIWPSEMLAYNGKGSKGG 295 Query: 284 -------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 L LP++V + F+ +G+K S S G VI +++ VDA+RY++ Sbjct: 296 ETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYVKDILARYPVDAVRYYISVAGPES 355 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVC 394 D + + N +LA+ GNLV+R ++I K++ G IP + T D +L Sbjct: 356 SDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNF-GEIPPLDEDSMTNEDRGLLEEA 414 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 S + +++ AL++ + +V ++++Y A +PW++K R TVL+V + Sbjct: 415 SAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISATEPWKIKDDQA-RLGTVLHVAAQA 473 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 + LL F+P A K+++ L Sbjct: 474 VSDANHLLAPFLPHSAQKVWEAL 496 >gi|229099491|ref|ZP_04230419.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-29] gi|228683787|gb|EEL37737.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-29] Length = 544 Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 130/514 (25%), Positives = 234/514 (45%), Gaps = 47/514 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G I A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPITIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT D+ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTVVEIADKYHEEFERCFHSLGFTYDCYTRTDSEYHHETVQKVFLRLLEEGYIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218 E ++F L +Q+++ E + R+ I +VK GL+D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKGVVEIAKQ---KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPVGV 238 Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADL---HVIGKDILRF 270 IP +D + +YVWI+A+T Y + + + G +FW + +V GKD + F Sbjct: 239 PIPVAGYEDKK--IYVWIEAVTGYYSASKHWAEKTGKDDQEFWDKETKTYYVHGKDNIPF 296 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 H+I WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 297 HSIIWPAVLLGVGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILESYDPDSIRYFL 356 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +D + N++L GN V+R++ I K YDG++P E + Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLRFIEKYYDGVVPKGTIHVELKDK 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 + + V I + AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 417 VEGLYKYVGAAIEQTK----FKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIY 472 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V +I A LL+ F+P + ++ + L + N Sbjct: 473 NCVYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506 >gi|146281645|ref|YP_001171798.1| methionyl-tRNA synthetase [Pseudomonas stutzeri A1501] gi|145569850|gb|ABP78956.1| methionyl-tRNA synthetase [Pseudomonas stutzeri A1501] Length = 692 Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 136/524 (25%), Positives = 233/524 (44%), Gaps = 60/524 (11%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E ++ +++A+ Y N H+GH E I D+ RF +L G ++ D HG I Sbjct: 14 MSEARQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 73 Query: 61 AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D AD L +++D+F T + + +++ ++ D G I Sbjct: 74 RAEKEGITPEQLIANVQAEHSADFADFL-VNFDNFHSTHSPENRELAELIYTRLRDAGHI 132 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164 + ++ ++ + D KG A+ QY A + P + + Sbjct: 133 ATRSVTQYFD-PEKGMFLADRFIKGTCPRCAAEDQYGDNCEKCGATYEPTELKDPRSAIS 191 Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 +FF+L ++ L + L N++ ++ GL++ +SR Sbjct: 192 GATPVLKDSKHFFFKLPDFEAMLKEWTRGG---ALQESVANKIAEWLDGGLQEWDISRDA 248 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWP----ADL-HVIGKD 266 +G +IP +P YVW+DA Y+ + L P+ S FW A+L H IGKD Sbjct: 249 PYFGFEIPGEPGKYFYVWLDAPIGYMASFQNLCKRRPELSFDAFWSKESSAELYHFIGKD 308 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FH ++WPA L A P V HG++ G+K+SKS G I ++ + + LR Sbjct: 309 IINFHTLFWPAMLEGAGFRKPTAVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLR 368 Query: 327 YFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTP- 380 Y+ ++ G D + D ++VN+DL + N+ SR I K DG++ P P Sbjct: 369 YYYASKLGRGVDDLDLNLDDFVQKVNSDLVGKVVNIASRCAGFIHKGNDGVMVEANPEPE 428 Query: 381 --GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 AF + SI E R+ RA+ ++++L + + + PW L K Sbjct: 429 LWAAFQAAAPSIADA-----YEARD------FARAMREIMALADRANAWIADKAPWALNK 477 Query: 439 TNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +A + + V + RQL I L+ +P LA L VA Sbjct: 478 VEGKQAEVQEICALGVNLFRQLVIFLKPVLPNLAAAAEQFLNVA 521 >gi|158341247|ref|YP_001522389.1| methionyl-tRNA synthetase [Acaryochloris marina MBIC11017] gi|187645697|sp|A8ZQ66|SYM1_ACAM1 RecName: Full=Methionyl-tRNA synthetase 1; AltName: Full=Methionine--tRNA ligase 1; Short=MetRS 1 gi|158311488|gb|ABW33099.1| methionyl-tRNA synthetase [Acaryochloris marina MBIC11017] Length = 558 Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 127/513 (24%), Positives = 234/513 (45%), Gaps = 40/513 (7%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N H+G+ M+ AD+ ARF R +G +VL+ TDEHG AA +AG+ Sbjct: 5 ITSALPYINGIKHLGNLVGSMLPADIYARFLRQEGEEVLYICATDEHGTPAEIAAIDAGL 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 F + +++ +S+D F RT+ +H+ + +++++ + I + S + Sbjct: 65 EVAEFCAKQYHKQKEIYKRFGLSFDYFGRTSAPENHELTQYFYQQLAKQNFIEEREISQF 124 Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWMEEEG------------ 164 Y+L D+ + D V Y+ A G Q N P + ++ Sbjct: 125 YALDDQRFLPDRYVTGTCPHCGYEQARGDQCENCTKVLTPTELIKPRSTISGSTHLELRT 184 Query: 165 ---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 F RL D++ ++ + ++ ++ + ++ GLK ++R WG+ +P Sbjct: 185 SRHLFLRLDKLSDEVRNWVDKQTQW--STLTKSIALKWLNEGLKSRCITRDLV-WGVPVP 241 Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLH---VIGKDILRFHAI 273 + + + YVW DA Y++ T + + + W D+H + KD L FH I Sbjct: 242 TEGFERKVFYVWFDAPIGYISATKAWGDITNNDWECWWKESDDVHYTQFMAKDNLPFHTI 301 Query: 274 YWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 WPA +L + P + GF + + G K S S + + +E D RY L+ Sbjct: 302 MWPATILGSREPWKMVDYIKGFNWLNYYGGKFSTSSQRGVFLDQALEIASADNWRYMLIA 361 Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 D + + +K+VN +LA+ +GN V+R + + +P G +++ + Sbjct: 362 NAPESADSAFTWEQFQKQVNKELADNLGNFVNRILKFTASRFGMTLPEGGTPGDAEAELQ 421 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451 C+ +++++R+ + N RA + +L ++Y D + PW L KT+ D + V+ Sbjct: 422 VTCNELVEKLRKYLHNLEFRRATETLNALWRTGNQYIDVRAPWVLFKTDQDETAMVIRTC 481 Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 V +IR AI F+P +FD L + D R Sbjct: 482 VNLIRLYAISSAPFIPHTTQALFDALQLTDVER 514 >gi|167561950|ref|ZP_02354866.1| methionyl-tRNA synthetase [Burkholderia oklahomensis EO147] Length = 710 Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 138/517 (26%), Positives = 226/517 (43%), Gaps = 47/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I DV R R+ G ++ + D HG + A+ Sbjct: 9 RRQILVTSALPYANGQIHIGHLVEYIQTDVWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 68 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT K +++ R + D +S+D+F T + ++ + D G I + Sbjct: 69 QEGVTPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKDAGFIAERE 128 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161 Y E + D KG A QY ++ NP + Sbjct: 129 IEQAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPYSVVSGATP 187 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 188 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 245 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L G W H IGKDI Sbjct: 246 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGIDFDAWIKKDSTTEQYHFIGKDI 305 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 306 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 365 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ ++K +DG + + Sbjct: 366 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SA 421 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 + +L+ + +I + + + RAL Q + L EV+ Y D KPWEL K + A+ Sbjct: 422 MNHPLLATLRDAIPQIAAHYEAREYGRALRQTMELADEVNGYVDTAKPWELAKDPANAAA 481 Query: 446 --TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + VA Sbjct: 482 LHETCSVSLEAFRLLSLALKPVLPRVAEGVEAFFGVA 518 >gi|172061392|ref|YP_001809044.1| methionyl-tRNA synthetase [Burkholderia ambifaria MC40-6] gi|226710896|sp|B1YUT2|SYM_BURA4 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|171993909|gb|ACB64828.1| methionyl-tRNA synthetase [Burkholderia ambifaria MC40-6] Length = 720 Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 134/516 (25%), Positives = 224/516 (43%), Gaps = 45/516 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K +D+ + D +S+D+F T + ++ + + G I + Sbjct: 77 KEGLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSESIYLALKENGLIAERA 136 Query: 124 YSGWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME----------- 161 Y E + D E K G + + + + P + + Sbjct: 137 IEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPYSVVSGATPV 196 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214 YFFRLS + S+ + E N++ ++ ++ L D +SR Sbjct: 197 RKTSTHYFFRLS--DPRCESFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDAP 254 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268 +G +IP P YVW+DA Y + L + +G W H IGKDIL Sbjct: 255 YFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDREGIDFDAWIRAGSTAEQYHFIGKDIL 314 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327 FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LRY Sbjct: 315 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRY 374 Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ A +D + D + RVN+DL N+ SR+ ++K +DG + + Sbjct: 375 YFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAM 430 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444 + +++ + I + + + RAL Q + L EV+ Y D KPWEL K N Sbjct: 431 NHPLVAKLRDAIASIAAHYEGREYSRALRQTMELADEVNAYVDGAKPWELAKDPANAVAL 490 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + VA Sbjct: 491 HETCSVSLEAFRLLSLALKPVMPRVAEAVEAFFGVA 526 >gi|146329154|ref|YP_001209826.1| methionyl-tRNA synthetase [Dichelobacter nodosus VCS1703A] gi|187647717|sp|A5EY62|SYM_DICNV RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|146232624|gb|ABQ13602.1| methionyl-trna synthetase [Dichelobacter nodosus VCS1703A] Length = 673 Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 137/502 (27%), Positives = 227/502 (45%), Gaps = 46/502 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++++S+A+ Y N H+GH E I D+ RF +L G + + D HG I A+ Sbjct: 5 RIFVSSALPYANGSIHLGHMVEHIQTDIWVRFQQLRGHECYYVCADDAHGTAIMLHAEKK 64 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GVT +V +D+ + + D L I++ + T + +++ + KG I K Sbjct: 65 GVTPEVLLDEVRAEHISDFQGFL-INHHHYHTTHSDENRQLTNEIYQTLKSKGYILKKEI 123 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161 S + ++ + D KG A QY + + P ++ Sbjct: 124 SQLFD-PEKNIFLPDRFIKGICPKCQAKDQYGDNCEVCGSTYAPTDLIQPYSVLSGATPI 182 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L + D L + + L R+++ + ++GL+ +SR WG Sbjct: 183 MKKSEHFFFDLPQFTDFLKDWLQRAD---LQPAMRHKLAEWFEAGLQPWDISRDAPYWGF 239 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILRFH 271 IP+ YVW+DA YL + + S FW D H IGKDI FH Sbjct: 240 TIPEAKDKYFYVWLDAPVGYLGSFQAFCQQHQHVSFDDFWRDDNKTERYHFIGKDIAYFH 299 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 ++WPA L A L P VF HGF+ GEK+SKS G I ++ + + LRY++ Sbjct: 300 MLFWPAMLEGAGLQKPTGVFCHGFLTVNGEKMSKSRGTFIKARTYLKHLRPEYLRYYIAS 359 Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ +D + + +++VN+DL + NL SRS + + D T AF SD ++ Sbjct: 360 KLSAKVEDIDLNLNDFRQKVNSDLVGKLINLASRSAPFLQRFADNT--TVSAF--SDSAL 415 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448 L + I + + + +A+ +V++L V+ Y D KPW L K A + + Sbjct: 416 LEQLRGKSETIARDYEQREFGQAVREVMALADAVNAYVDETKPWILAKETGKAAEIAQIA 475 Query: 449 YVTVEVIRQLAILLQAFVPKLA 470 V +E R L I L+ +PK+A Sbjct: 476 SVVLEAFRLLIIYLKPVLPKVA 497 >gi|229164009|ref|ZP_04291946.1| Methionyl-tRNA synthetase 2 [Bacillus cereus R309803] gi|228619392|gb|EEK76281.1| Methionyl-tRNA synthetase 2 [Bacillus cereus R309803] Length = 544 Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 135/541 (24%), Positives = 243/541 (44%), Gaps = 56/541 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F+ L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGYIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218 E ++F L +Q+++ E + R+ I +VK GL+D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKGVVEIAKQ---KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGV 238 Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD---LHVIGKDILRF 270 IP +D + +YVWI+A+T Y + + + G + FW D +V GKD + F Sbjct: 239 PIPVTGYEDKK--VYVWIEAVTGYYSASKHWAEETGKDDREFWDRDAKTYYVHGKDNIPF 296 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 H+I WPA LL +P + S+ ++ + K+S S + +++E D++RYFL Sbjct: 297 HSIIWPAVLLGIGEDAIPHHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFL 356 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +D + N++L GN V+R++ I K Y G++P E + Sbjct: 357 TINAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGILPKGSIDVELKDK 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 + + + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 417 V----EGLYKNVGEAIEQTKFKVALETIFDAVRFANKYFDERQPWKQREDDPVSCEETIY 472 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 V +I A LL+ F+P + ++ L + + Q P L D + P Sbjct: 473 NCVYLIANFANLLEPFLPFSSERVRTTLSI---------VQQTWGPQNTLPSRIDSVQPL 523 Query: 510 F 510 F Sbjct: 524 F 524 >gi|294339578|emb|CAZ87937.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) [Thiomonas sp. 3As] Length = 721 Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 150/576 (26%), Positives = 243/576 (42%), Gaps = 86/576 (14%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + + +++TA+ Y N HIGH E I AD RF R+ G +V F D HG I Sbjct: 1 MTSKRRFFVTTALPYANGPFHIGHIMEYIQADTWVRFQRMQGHEVHFVGADDAHGAPIMI 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--- 117 AA+ AG T + FV + D I +D++ T +H + +++ + G Sbjct: 61 AAEKAGETPQQFVADIAAGRAQYLDGFHIRFDNWHNTDAPENHQLAQDIYRALRKNGLIA 120 Query: 118 --------DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ------HNPVQW---- 159 D KG + L D Y GA QY +A + P + Sbjct: 121 MRDIEQFFDPVKGMF-----LPDR-YIKGQCPKCGAADQYGDACEVCGAVYAPTELKHPY 174 Query: 160 ----------MEEEGYFFRLSAYQDKLLSYYE-------SHPEFILPIERRNEVISFVKS 202 + E YFF+LS+ D+ Y +H + L E N+V + + Sbjct: 175 STLSGATPELRKSEHYFFQLSS--DRCADYLRDWTQAANAHGQPHLQTEVLNKVREWFTT 232 Query: 203 ------GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKF 255 GL D +SR +GI+IPD P YVW+DA YL + + D G A+ Sbjct: 233 DENGHGGLADWDISRDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNHFDK--GQAAQH 290 Query: 256 WPA------------------DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297 W A +H IGKDI+ FH ++WPA L + P ++ HGF+ Sbjct: 291 WHAPSRTAQSFDAFVADPAVEQVHFIGKDIVYFHTLFWPAMLHFSGRKTPSQINVHGFVT 350 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADL 354 GEK+SKS G I P++ + ++G++ LRY+L ++ +D + + RVN+DL Sbjct: 351 VGGEKMSKSRGTGISPLKYL-DIGLNPEWLRYYLAAKLTARVEDVDFTPEDFVARVNSDL 409 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N+ SR+ I + +DG + + + + + ++ + + RAL Sbjct: 410 IGKYVNIASRAAKFISQYFDGKL----GYAHNTGDLRDAAKALADDVAAAFEAREYARAL 465 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANK 472 ++++ ++ FDA +PW L K RA + L+++L +P L + Sbjct: 466 REIMAYADRINTAFDAAQPWILAKDEARRAELQDACSQALAGFWLLSVMLSPVLPALTAR 525 Query: 473 IFDILFVADENRCFQ---SLDQRLKPGFMLHKTFDP 505 + LF + + + L Q P L DP Sbjct: 526 VARELFGLERDFVWSDATELPQHAAPYQHLMHRIDP 561 >gi|212695407|ref|ZP_03303535.1| hypothetical protein BACDOR_04956 [Bacteroides dorei DSM 17855] gi|212662042|gb|EEB22616.1| hypothetical protein BACDOR_04956 [Bacteroides dorei DSM 17855] Length = 680 Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 142/510 (27%), Positives = 239/510 (46%), Gaps = 51/510 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I A+ G+ Sbjct: 10 VTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGI 69 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + VD+ ++ IS+D + RTT K HH+ +K + DK + + + Sbjct: 70 TPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKSEFIEKTSMQY 129 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQHNPVQWME 161 Y + D + + A+G Y + + PV E Sbjct: 130 YDEEAHQFLADRYIIGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGSQPVM-RE 188 Query: 162 EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLSRKTFDWG 217 + ++ L ++ L + E+H E+ R N + S++ GL+ ++SR DWG Sbjct: 189 TKHWYLPLDKHEGWLREWILENHKEW-----RPNVYGQCKSWLDMGLQPRAVSRD-LDWG 242 Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270 I +P + ++YVW DA Y++ T L PD + W D +H IGKD + F Sbjct: 243 IPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFIGKDNIVF 299 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327 H I +PA L + + LP V S+ F+ +G+KIS S + E +++ D LRY Sbjct: 300 HCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLRY 359 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L KD + + R N +L GN V+R++ + K +DG +P G T+ D Sbjct: 360 VLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPVCGELTDYD 419 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 + L + V E+ + + A + ++L ++Y +PW+L KT+ DR +T+ Sbjct: 420 KETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLVKTDMDRVATI 479 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L + ++++ LAI + F+P + K+ +L Sbjct: 480 LNIALQLVANLAIAFEPFLPFSSEKLRQML 509 >gi|15604750|ref|NP_219534.1| methionyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX] gi|7388280|sp|O84035|SYM_CHLTR RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|3328422|gb|AAC67622.1| Methionyl-tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX] gi|297748163|gb|ADI50709.1| Methionyl-tRNA synthetase [Chlamydia trachomatis D-EC] gi|297749043|gb|ADI51721.1| Methionyl-tRNA synthetase [Chlamydia trachomatis D-LC] Length = 550 Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 136/514 (26%), Positives = 235/514 (45%), Gaps = 48/514 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 E ++ I++A+ Y N H GH AY + ADV ARF RL G +VL+ G+DE+G I Sbjct: 2 ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ AG+ + +VD + +D L IS D F RTT H + ++ + ++G + Sbjct: 60 LNAELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNTYHPAIVQDFYRNLQERGLV 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155 YS + + D V +G + Q A + Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTG 179 Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + + E + L ++ LL++ + L RN V +++ L+ +++R Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLAFVQG---IYLRPHMRNFVTDYIEH-LRPRAVTRD-L 234 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGKD 266 WGI +PD + YVW DA Y++ T + +P+ K KFW D IGKD Sbjct: 235 SWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGDPEAWK-KFWLDDTVTYAQFIGKD 293 Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324 FHA +PA + +LP K + + F+L +G + SKS GN ID +E +D Sbjct: 294 NTSFHAAIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSLDK 353 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L D + K R N++L GN V+R ++ +K+ + +P Sbjct: 354 LRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-QLE 412 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDR 443 + D +S ++ ++ E+ + +A + ++ L + + YF+ + PW+L K+ N +R Sbjct: 413 QKDLDFISKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNR 472 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +L+ + LA++ +P+ A KI +++ Sbjct: 473 VRAILFCACYCQKLLALISYPIMPETALKILEMI 506 >gi|315928497|gb|EFV07803.1| methionyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 305] Length = 399 Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 88/225 (39%), Positives = 137/225 (60%), Gaps = 2/225 (0%) Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309 G AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+ +GEK+SKS GN Sbjct: 13 GENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGN 72 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 V+ P EV++ G +A RYFL+RE+ G DG + ++ L R+NA+L+N GNL++R + M Sbjct: 73 VVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNRIIGMS 132 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 K G I G + L+ L E ++N +R L ++ +S + Sbjct: 133 TKYSQGNISKEGVLKFYNAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVANLAIS 191 Query: 430 AQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +PW L K N ++A+ ++ + ++ + ++LL +PK + K+ Sbjct: 192 KYEPWSLIKENKHEQANALVALCANILAKTSLLLSPTLPKSSQKV 236 >gi|237725990|ref|ZP_04556471.1| methionyl-tRNA synthetase [Bacteroides sp. D4] gi|229435798|gb|EEO45875.1| methionyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4] Length = 694 Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 140/507 (27%), Positives = 238/507 (46%), Gaps = 45/507 (8%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I A+ G+ Sbjct: 24 VTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGI 83 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + VD+ ++ IS+D + RTT K HH+ +K + DK + + + Sbjct: 84 TPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKSEFIEKTSMQY 143 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQHNPVQWME 161 Y + D + + A+G Y + + PV E Sbjct: 144 YDEEAHQFLADRYIIGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGSQPVM-RE 202 Query: 162 EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + ++ L ++ L + E+H E+ + + S++ GL+ ++SR DWGI + Sbjct: 203 TKHWYLPLDKHEGWLREWILENHKEWRPNV--YGQCKSWLDMGLQPRAVSRD-LDWGIPV 259 Query: 221 PDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273 P + ++YVW DA Y++ T L PD + W D +H IGKD + FH I Sbjct: 260 PVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFIGKDNIVFHCI 316 Query: 274 YWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLV 330 +PA L + + LP V S+ F+ +G+KIS S + E +++ D LRY L Sbjct: 317 VFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLRYVLT 376 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 KD + + R N +L GN V+R++ + K +DG +P G T+ D+ Sbjct: 377 ANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPVCGELTDYDKET 436 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 L + V E+ + + A + ++L ++Y +PW+L KT+ DR +T+L + Sbjct: 437 LKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLVKTDMDRVATILNI 496 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477 ++++ LAI + F+P + K+ +L Sbjct: 497 ALQLVANLAIAFEPFLPFSSEKLRQML 523 >gi|37679443|ref|NP_934052.1| methionyl-tRNA synthetase [Vibrio vulnificus YJ016] gi|61216264|sp|Q7MM14|SYM_VIBVY RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|37198187|dbj|BAC94023.1| methionyl-tRNA synthetase [Vibrio vulnificus YJ016] Length = 690 Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 141/542 (26%), Positives = 231/542 (42%), Gaps = 60/542 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 10 QRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNIVNFICADDAHGTPIMLKAQ 69 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ + + S + DIS+D++ T + + ++ ++ G I Sbjct: 70 QMGMSPEEMIAAVSIEHQKDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRT 129 Query: 124 YSGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM----- 160 S + E + D V KG A G+ Y+ NP + Sbjct: 130 ISQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 188 Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + E +FF L ++ L + S L E N++ + +SGL+ +SR +G Sbjct: 189 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQTETANKMQEWFESGLQQWDISRDAPYFG 245 Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRF 270 +IP + YVW+DA Y+ + L + D ++W D H IGKDI+ F Sbjct: 246 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKDSKTELYHFIGKDIVYF 305 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L + P VF HG++ G K+SKS G + +E + + LRY+ Sbjct: 306 HSLFWPAMLDGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYA 365 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 ++ D + + +RVNAD+ N I NL SR+ I K ++G + E Sbjct: 366 AKLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLAENFVEPELYNE 425 Query: 390 ILSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRAS 445 ++ R+ L E RE RA+ ++ +L + ++Y D + PW + K Sbjct: 426 FVAAADRIAELYEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGKDQELQ 479 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL------------FVADENRCFQSLDQRL 493 + V + + R L L+ +P LA + L A E F++L R+ Sbjct: 480 EICSVGINLFRVLMTYLKPVMPALAARTEAFLNEELTWEGVAQPLTAHEITAFKALFNRI 539 Query: 494 KP 495 P Sbjct: 540 DP 541 >gi|260060957|ref|YP_003194037.1| methionyl-tRNA synthetase [Robiginitalea biformata HTCC2501] gi|88785089|gb|EAR16258.1| methionyl-tRNA synthetase [Robiginitalea biformata HTCC2501] Length = 691 Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 133/515 (25%), Positives = 230/515 (44%), Gaps = 49/515 (9%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E+ I+ A+ Y N HIGH A + AD+ +R+ RL G +VLF G+DEHG I A Sbjct: 9 ERTTITAALPYTNGPIHIGHLAGVYVPADIYSRYLRLRGEEVLFVCGSDEHGVAIPMKAG 68 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ K +D+ R+ + I++D++ RT+ H +T + K+ D+GD + Sbjct: 69 REGISPKELIDKYDALIRESFEAFGIAFDNYSRTSAPIHRETASAFFTKLHDQGDFEEQV 128 Query: 124 YSGWYSLRDEAYYNDDEVY----KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 + + D V K + Y Q E G + D + Sbjct: 129 TDQLFDPEAGQFLADRFVVGTCPKCGHTEAYGDQ------CENCGSSLNATDLIDPRSAI 182 Query: 180 YESHP------EFILPIERR---------------------NEVISFVKSGLKDLSLSRK 212 + P + LP++R + S++ GLK +++R Sbjct: 183 SGAQPVLKQTRHWFLPLDRYEGFLRTWILDGHKNDWKPNVYGQCKSWIDEGLKPRAVTRD 242 Query: 213 TFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGK 265 +WGI +P + ++YVW DA Y+++T +G+ + W D LH IGK Sbjct: 243 -LEWGIPVPLEGAEGKVLYVWFDAPIGYISSTREWARREGADWEIWWKDPGTRLLHFIGK 301 Query: 266 DILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--V 322 D + FH I +P+ L + + LP+ V ++ F+ +G+K+S S + E +EE Sbjct: 302 DNIVFHCIIFPSMLKAHGDFILPENVPANEFLNLEGQKLSTSKNWAVWLHEYLEEFPDMQ 361 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D LRY L KD + + R N +L GN ++R + K G +P Sbjct: 362 DVLRYALTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVAVLTDKYKGGQVPALQN 421 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 +E+D + L I + + ++++L ++Y ++PW++ K +PD Sbjct: 422 LSENDRNTLHAMRAYPARIADCLDRFRFREGSQELMNLARLGNKYLADEEPWKVIKEDPD 481 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 R T+L V ++V LA+L + F+P A ++ +IL Sbjct: 482 RVGTILGVGLQVAAALAVLCEPFLPFTAGRLREIL 516 >gi|33591426|ref|NP_879070.1| methionyl-tRNA synthetase [Bordetella pertussis Tohama I] gi|68565997|sp|Q7W0F7|SYM_BORPE RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|33571068|emb|CAE40559.1| methionyl-tRNA synthetase [Bordetella pertussis Tohama I] Length = 692 Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 141/555 (25%), Positives = 250/555 (45%), Gaps = 63/555 (11%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 L+++TA+ Y N HIGH E I AD+ R R+ G V F D HG I A+ G Sbjct: 5 LFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEKEG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--------- 117 +T + V + + D I +D + T + + +++ + +G Sbjct: 65 ITPQALVARYAAERPRYLDGFHIRFDHWHSTDTPENVALSQEIYRALKSEGLIETRSIEQ 124 Query: 118 --DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------------E 161 D KG + ++ E + G + A + P + + Sbjct: 125 FYDPVKGMFLADRYIKGECPRCHAKDQYGDSCEVCGAVYAPTELINPYSALTGAAPVLKS 184 Query: 162 EEGYFFRLSAYQDKLLSYYES-----------HPEFILPIERRNEVISF-VKSGLKDLSL 209 + +FF+LS + + + + H + + + R ++ ++ L D + Sbjct: 185 SDHFFFKLS--DPRCVEFLQQWTTGANRQGVKHLQAEVQAKTREWLVGDDGEAKLGDWDI 242 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPA----DLHVI 263 SR +GI+IPD P YVW+DA YL + G A PA +H I Sbjct: 243 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAAKGLDFDALLDPAGPTEQVHFI 302 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323 GKDI+ FHA++WPA L A P ++ HGFI GEK+SKS G I P+ + E+G+D Sbjct: 303 GKDIIYFHALFWPAMLKFAGRKTPDQLNVHGFITVSGEKMSKSRGTGISPLRYL-EIGMD 361 Query: 324 A--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 A LRY++ ++ A +D ++ + RVN+DL N+ SR+ + I + +DG + Sbjct: 362 AEWLRYYMAAKLNARVEDMDFNPEDFVARVNSDLVGKYVNIASRAAAFITRHFDGEL--- 418 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK-- 438 A+ +++ + ++ + IR + + +RA+ ++++ +++ FDA +PW + K Sbjct: 419 -AYDGDTDALAAEFAQQAESIRAAFEAREYNRAVREIMAHADRINQAFDAAQPWVMAKGI 477 Query: 439 -----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF---QSLD 490 R + + + L+++L +P LA+++ LF A+ + + Q L Sbjct: 478 GAADAATRARLQDICSRALAGFKALSVMLAPVLPALASRVARELFGANADFAWGDAQQLP 537 Query: 491 QRLKPGFMLHKTFDP 505 QR+ P L + DP Sbjct: 538 QRVAPFKHLMQRVDP 552 >gi|187649782|sp|A4VJ05|SYM_PSEU5 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS Length = 679 Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 136/524 (25%), Positives = 233/524 (44%), Gaps = 60/524 (11%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E ++ +++A+ Y N H+GH E I D+ RF +L G ++ D HG I Sbjct: 1 MSEARQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D AD L +++D+F T + + +++ ++ D G I Sbjct: 61 RAEKEGITPEQLIANVQAEHSADFADFL-VNFDNFHSTHSPENRELAELIYTRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164 + ++ ++ + D KG A+ QY A + P + + Sbjct: 120 ATRSVTQYFD-PEKGMFLADRFIKGTCPRCAAEDQYGDNCEKCGATYEPTELKDPRSAIS 178 Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 +FF+L ++ L + L N++ ++ GL++ +SR Sbjct: 179 GATPVLKDSKHFFFKLPDFEAMLKEWTRGG---ALQESVANKIAEWLDGGLQEWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWP----ADL-HVIGKD 266 +G +IP +P YVW+DA Y+ + L P+ S FW A+L H IGKD Sbjct: 236 PYFGFEIPGEPGKYFYVWLDAPIGYMASFQNLCKRRPELSFDAFWSKESSAELYHFIGKD 295 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FH ++WPA L A P V HG++ G+K+SKS G I ++ + + LR Sbjct: 296 IINFHTLFWPAMLEGAGFRKPTAVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLR 355 Query: 327 YFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTP- 380 Y+ ++ G D + D ++VN+DL + N+ SR I K DG++ P P Sbjct: 356 YYYASKLGRGVDDLDLNLDDFVQKVNSDLVGKVVNIASRCAGFIHKGNDGVMVEANPEPE 415 Query: 381 --GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 AF + SI E R+ RA+ ++++L + + + PW L K Sbjct: 416 LWAAFQAAAPSIADA-----YEARD------FARAMREIMALADRANAWIADKAPWALNK 464 Query: 439 TNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +A + + V + RQL I L+ +P LA L VA Sbjct: 465 VEGKQAEVQEICALGVNLFRQLVIFLKPVLPNLAAAAEQFLNVA 508 >gi|161936261|ref|YP_101774.2| methionyl-tRNA synthetase [Bacteroides fragilis YCH46] gi|253566405|ref|ZP_04843858.1| methionyl-tRNA synthetase [Bacteroides sp. 3_2_5] gi|265767265|ref|ZP_06094931.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_16] gi|68565973|sp|Q64MP7|SYM_BACFR RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|251944577|gb|EES85052.1| methionyl-tRNA synthetase [Bacteroides sp. 3_2_5] gi|263252570|gb|EEZ24082.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_16] gi|301165294|emb|CBW24865.1| putative methionyl-tRNA synthetase [Bacteroides fragilis 638R] Length = 679 Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 139/514 (27%), Positives = 242/514 (47%), Gaps = 45/514 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K ++ +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I Sbjct: 3 KNFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + IS+D + RT+ K HH+ +KK+ +KG+ Sbjct: 63 RAKKEGITPQDVVDRYHFLIKKSFEEFGISFDVYSRTSSKTHHELASDFFKKLYEKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + D + + ++G Y + + Sbjct: 123 EKTSEQYYDEEAHQFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 PV E + ++ L ++ L + E H E+ + + S++ GL+ ++SR Sbjct: 183 KPVM-KETKHWYLPLDKHETWLRQWILEEHKEWRPNV--YGQCKSWLDMGLQPRAVSR-D 238 Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKD 266 DWGI +P + ++YVW DA Y++ T L PD + W D +H IGKD Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLVHFIGKD 295 Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVD 323 + FH I +PA L + + LP V S+ F+ +G+KIS S + E +E+ D Sbjct: 296 NIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPGKQD 355 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 LRY L KD + + R N +L GN V+R++ + K ++G +P G Sbjct: 356 VLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFEGKVPAAGEL 415 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 T+ D+ L S V E+ + + A + ++L ++Y +PW+L KT+ +R Sbjct: 416 TDYDKETLKEFSDVKAEVEKLLNVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMER 475 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 T+L ++++++ LAI + F+P + ++ +L Sbjct: 476 VGTILNISLQLVANLAIAFEPFLPFSSERLRQML 509 >gi|237802466|ref|YP_002887660.1| methionyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT] gi|231273700|emb|CAX10478.1| methionyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT] Length = 550 Score = 169 bits (429), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 135/514 (26%), Positives = 235/514 (45%), Gaps = 48/514 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 E ++ I++A+ Y N H GH AY + ADV ARF RL G +VL+ G+DE+G I Sbjct: 2 ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ AG+ + +VD + +D L IS D F RTT H + ++ + ++G + Sbjct: 60 LNAELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNTYHPAIVQDFYRNLQERGLV 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155 YS + + D V +G + Q A + Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTG 179 Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + + E + L ++ LL++ + L RN V +++ L+ +++R Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLAFVQG---IYLRPHMRNFVTDYIEH-LRPRAVTRD-L 234 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGKD 266 WGI +PD + YVW DA Y++ T + +P+ K KFW D IGKD Sbjct: 235 SWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGDPEAWK-KFWLDDTVTYAQFIGKD 293 Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324 FHA+ +PA + +LP K + + F+L +G + SKS GN ID +E +D Sbjct: 294 NTSFHAVIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSLDK 353 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L D + K R N++L GN V+R ++ +K+ + +P Sbjct: 354 LRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-QLE 412 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDR 443 + D +S ++ ++ E+ + + + ++ L + + YF+ + PW+L K+ N +R Sbjct: 413 QKDLDFISKSQKLAKDAAEHYAQYSLRKVCSTIMELAALGNGYFNDEAPWKLAKEGNWNR 472 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +L+ + LA++ +P+ A KI +++ Sbjct: 473 VRAILFCACYCQKLLALISYPIMPETALKILEMI 506 >gi|254421312|ref|ZP_05035030.1| methionyl-tRNA synthetase [Synechococcus sp. PCC 7335] gi|196188801|gb|EDX83765.1| methionyl-tRNA synthetase [Synechococcus sp. PCC 7335] Length = 562 Score = 169 bits (429), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 129/517 (24%), Positives = 227/517 (43%), Gaps = 44/517 (8%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N H+G+ M+ ADV ARF R +G +VL+ TDEHG AA G+ Sbjct: 5 ITSALPYINGIKHLGNLVGSMLPADVYARFLRQEGEEVLYICATDEHGTPAEIAAVEEGL 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 F + D+ +S+D F RT+ + + ++++ ++G I + S Sbjct: 65 EVAEFCQRQYERQADIYQQFGLSFDYFGRTSSVEQKELTQYFYRRLDEQGYIEERETSQV 124 Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWMEEEG------------ 164 YS+ D+ + D V Y+ A G Q N +P + +E Sbjct: 125 YSIADQRFLPDRYVEGTCPNCGYERARGDQCENCTKLLSPTELIEPRSAISGSTNVEVRA 184 Query: 165 ---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 F RL D + + ++ + P R+ ++ GL+ ++R WG+ +P Sbjct: 185 SRHLFLRLDQLSDDVRRWVDAQTNW--PNLTRSIAYKWLDEGLQSRGITRD-LKWGVPVP 241 Query: 222 DD--PQYIMYVWIDALTNYLTTTGYL------DNPDGSKAKFWPAD----LHVIGKDILR 269 + + YVW DA Y++ T +N K+ ++ AD + KD L Sbjct: 242 KEGFEDKVFYVWFDAPIGYVSATKAWSDQQSDENTTDWKSWWYDADDVSYTQFMAKDNLP 301 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 FH I WPA +L P + GF + + G K S S + + +E D RY Sbjct: 302 FHTIMWPATILGTKEPWKMANYIKGFNWLNYYGGKFSTSSKRGVFLDQALEIAPADYWRY 361 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L+ D + + + +VN +LA+ GN ++R + + + +P G E++ Sbjct: 362 MLMASAPESADSAFTWEQFQTKVNKELADNFGNFINRILKFTVSRFGNELPAGGEPGEAE 421 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 ++ C ++ +R ++QN +A + +L S ++Y D + PW L K + D A+ V Sbjct: 422 AALEKTCKEMVARLRSHLQNMEFRKATETLNALWSAGNQYIDVRAPWTLFKQDKDEAAVV 481 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 + + +IR AI F+P + ++FD L + R Sbjct: 482 IRTCINLIRLYAIASSPFIPATSQQLFDALQLTKAER 518 >gi|288801014|ref|ZP_06406470.1| methionine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039] gi|288331948|gb|EFC70430.1| methionine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039] Length = 681 Score = 169 bits (429), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 144/520 (27%), Positives = 237/520 (45%), Gaps = 53/520 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K ++ ++ A+ Y N HIGH A I AD+ R+ RL G +V F G+DEHG I Sbjct: 4 KNYKRTTVTAALPYANGGVHIGHLAGVYIPADIYVRYLRLKGEEVAFICGSDEHGVPITI 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + +D IS+D + RTT K H T +K + D + Sbjct: 64 RAKKEGITPQDVVDRYHQLIKDSFSDFGISFDIYSRTTSKIHQQTASDFFKHLLDNNKLQ 123 Query: 121 KGCYSGWYS------------------LRDEAYYNDDEVYKGAD---GQYYNAQHN---- 155 +G Y +E Y D G D + N + Sbjct: 124 EGETEQLYDEEVHQFLADRYITGECPHCHNEGAYGDQCESCGRDLSPTELINPKSTISGS 183 Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 PV + + ++ L+ YQ L + E H E+ R V KS L DL L + Sbjct: 184 TPVL-RKTKNWYLPLNDYQTWLKEWILEGHKEW------RANVYGQCKSWL-DLDLQPRA 235 Query: 214 ----FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHV 262 +WGI +P + ++YVW DA Y++ T L D K W D +H Sbjct: 236 MTRDLNWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELYPNDWKK---WWQDSETRLVHF 292 Query: 263 IGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV- 320 IGKD + FH I +P+ L + + LP+ V ++ F+ + KIS S I E ++E+ Sbjct: 293 IGKDNIVFHCIIFPSMLKAHGDYILPENVPANEFLNLEDNKISTSRNWAIWLHEYLQELP 352 Query: 321 -GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 D LRY L KD + ++R N +L GN V+R++ + K ++G++P Sbjct: 353 NKQDVLRYVLTANAPETKDNNFTWKDYQERNNNELVAVYGNFVNRALQLTKKYFNGVVPA 412 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 G + D+ + + V +++ + N A +V+++ ++Y +PW+L KT Sbjct: 413 CGELLDIDKEVFNELKGVKEKVETLLNNYKFRDAQREVMNIARIGNKYMTDCEPWKLWKT 472 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 P R T+LYV ++++ LAI + F+P + K+ ++ + Sbjct: 473 EPQRVETILYVCLQLVANLAIAFEPFLPFSSKKLRQLIHI 512 >gi|323343515|ref|ZP_08083742.1| methionine--tRNA ligase [Prevotella oralis ATCC 33269] gi|323095334|gb|EFZ37908.1| methionine--tRNA ligase [Prevotella oralis ATCC 33269] Length = 687 Score = 169 bits (429), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 136/517 (26%), Positives = 235/517 (45%), Gaps = 53/517 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K ++ ++ A+ Y N HIGH A + AD+ R+ RL DV+F G+DEHG I Sbjct: 4 KNFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQDVIFIGGSDEHGVPIMI 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + IS+D + RTT + HH+ ++K+ D G + Sbjct: 64 RARKEGITPQDVVDRYHSLIKKSFEDFGISFDIYSRTTSETHHNLASDFFRKLYDNGKLI 123 Query: 121 KGCYSGWYSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWME------- 161 + +Y + D D Y G + + +P++ ++ Sbjct: 124 EKETEQYYDEEAHQFLADRYIVGECPHCHNDHAY-GDQCERCGSDLSPMELIDPHSTISG 182 Query: 162 -------EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + ++ L+ YQ+ L + E H E+ R+ V KS L D+ L + Sbjct: 183 SKPIIKKTKNWYLPLNEYQEWLKQWILEDHQEW------RSNVYGQCKSWL-DMDLQPRA 235 Query: 214 ----FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA--------D 259 DWGI +P D ++YVW DA Y++ T L + + K W Sbjct: 236 MTRDLDWGIPVPVDGADGKVLYVWFDAPIGYISNTKELCDREPQKWGKWETWWKDEDTRL 295 Query: 260 LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 +H IGKD + FH + +P L + LP V ++ F+ + +KIS S + E + Sbjct: 296 VHFIGKDNIVFHCLIFPVMLKAHGGYILPDNVPANEFLNLENDKISTSRNWAVWLHEYLA 355 Query: 319 EV--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 ++ D LRY L KD + ++R N +L GN V+R++ + K ++G+ Sbjct: 356 DLPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNNELVAVYGNFVNRALQLTKKYFNGI 415 Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 +P G E D LS V Q++ + A + ++L +RY +PW++ Sbjct: 416 VPVCGELLEVDRQALSEFKNVKQDVETLLDAFKFRDAQKEAMNLARIGNRYITECEPWKV 475 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 KT+P R T+LY++++++ LAI + F+P + K+ Sbjct: 476 WKTDPKRVETILYISLQLVANLAIAFEPFLPFSSEKL 512 >gi|319640248|ref|ZP_07994973.1| methionyl-tRNA synthetase [Bacteroides sp. 3_1_40A] gi|317388023|gb|EFV68877.1| methionyl-tRNA synthetase [Bacteroides sp. 3_1_40A] Length = 680 Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 140/507 (27%), Positives = 238/507 (46%), Gaps = 45/507 (8%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I A+ G+ Sbjct: 10 VTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGI 69 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + VD+ ++ IS+D + RTT K HH+ +K + DKG+ + + Sbjct: 70 TPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKGEFIEKTSMQY 129 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQHNPVQWME 161 Y + D + + A+G Y + + PV E Sbjct: 130 YDEEAHQFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGSKPVM-RE 188 Query: 162 EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + ++ L ++ L + E+H E+ + + S++ GL+ ++SR DWGI + Sbjct: 189 TKHWYLPLDKHEGWLREWILENHKEWRPNV--YGQCKSWLDMGLQPRAVSRD-LDWGIPV 245 Query: 221 PDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273 P + ++YVW DA Y++ T L PD + W D +H IGKD + FH I Sbjct: 246 PVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFIGKDNIVFHCI 302 Query: 274 YWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLV 330 +PA L + + LP V S+ F+ +G+KIS S + E +++ D LRY L Sbjct: 303 VFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLRYVLT 362 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 KD + + R N +L GN V+R++ + K +DG + G T+ D+ Sbjct: 363 ANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVSVCGELTDYDKET 422 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 L + V E+ + + A + ++L ++Y +PW+L KT+ DR +T+L + Sbjct: 423 LKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMDRVATILNI 482 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477 ++++ LAI + F+P + K+ +L Sbjct: 483 ALQLVANLAIAFEPFLPFSSEKLRKML 509 >gi|148653506|ref|YP_001280599.1| methionyl-tRNA synthetase [Psychrobacter sp. PRwf-1] gi|187647756|sp|A5WG58|SYM_PSYWF RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|148572590|gb|ABQ94649.1| methionyl-tRNA synthetase [Psychrobacter sp. PRwf-1] Length = 697 Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 135/526 (25%), Positives = 230/526 (43%), Gaps = 57/526 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N H+GH E I D+ R + V + D HG I A+ Sbjct: 3 QILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAQSHQVTYVCADDAHGTAIMLKAEAN 62 Query: 66 GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GVT + + + D + L I +D++ T + + + +++++++ +G I Sbjct: 63 GVTPEQQIATVKASHEADFSKFL-IGFDNYHSTHSEENRELSELIYRRLNGEGHISTKDV 121 Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQY----------YNAQH--NPVQWME------ 161 + + D V GA QY YNA NP + Sbjct: 122 EQLFDPEKGLFLADRFVKGECPECGAQDQYGDNCEVCGTTYNATELKNPYSTLSGATPVL 181 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + YFF L ++ L + + E L N++ + ++GL +SR +G K Sbjct: 182 RTSKHYFFNLPEFESFLKQW--TKDEGRLQPSVSNKLQEWFEAGLASWDISRDAPYFGFK 239 Query: 220 IPDDPQ----YIMYVWIDALTNYLTT--------TGYLD--NPDGSKAKFWPAD------ 259 IPD P+ YVW+DA Y+ + G D P+ S +W + Sbjct: 240 IPDTPEGEPDKYFYVWLDAPVGYMASFKNLCKQRQGSTDPQQPELSFDDYWLQENQHKTE 299 Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 H IGKDI+ FHA++WPA L + P VF+HGF++ G+K+SKS G I + Sbjct: 300 LYHFIGKDIVYFHALFWPAMLAGSEYRTPTGVFAHGFLMVNGDKMSKSRGTFIQAETFAK 359 Query: 319 EVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 + + LRY+ +++ +D D ++VN+D+ + N+ SRS I K YDGM+ Sbjct: 360 HLNPEYLRYYFASKLSEKVEDINLDFADFMQKVNSDMVGKVVNIASRSAGFIAKKYDGML 419 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 A E +L+ R +EI +N+ RA+ ++ + + Y D++KPW + Sbjct: 420 SDSCAEPE----LLNEIVRAGEEIATAYENREFSRAMRLIMQCADKANEYIDSKKPWAMA 475 Query: 438 KTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 K V V + + RQL + L +P+L + L + D Sbjct: 476 KEEGREQEVQDVCTVAINIFRQLMVYLAPVLPELTDNAKAFLNIDD 521 >gi|302879580|ref|YP_003848144.1| methionyl-tRNA synthetase [Gallionella capsiferriformans ES-2] gi|302582369|gb|ADL56380.1| methionyl-tRNA synthetase [Gallionella capsiferriformans ES-2] Length = 695 Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 141/522 (27%), Positives = 230/522 (44%), Gaps = 54/522 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ RF ++ G +V + D HG I A++ Sbjct: 5 KILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGHEVHYVCADDTHGTPIMLRAESE 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + + + D + +D + T + ++ + +KG I Sbjct: 65 GITPEALIARVWQEHYDDFAAFHVEFDHYGSTNSAENKVCAESIYLALREKGLIEVRSIE 124 Query: 126 GWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME------------- 161 +Y + D E K G + + A + P++ + Sbjct: 125 QFYDPVKNMFLPDRFIKGECPKCHAKDQYGDNCEVCGAAYAPIELINPYSAVSGAAPVMR 184 Query: 162 -EEGYFFRLSA--YQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214 + YFF+LSA Q L + S L E N++ ++ ++ L D +SR Sbjct: 185 NSDHYFFKLSADTCQQFLREWTRSGS---LQSEAANKMQEWLGAEGENKLSDWDISRDAP 241 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKF---WPAD-----LHV 262 +G +IPD P YVW+DA Y+ + L N GS+ +F W D H Sbjct: 242 YFGFEIPDAPGKYFYVWLDAPVGYMGSFRQLCNSRMQDSGSRIEFDEYWKPDSTTELYHF 301 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-G 321 IGKDIL FHA++WPA L A P K+F+HGF+ GEK+SKS G I ++ + Sbjct: 302 IGKDILYFHALFWPAMLEHAGFRTPTKLFAHGFLTVNGEKMSKSRGTFITAKSYVDNIKN 361 Query: 322 VDALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 + LRY+ +I +D + D +VN+DL N+ SR I K +DG + Sbjct: 362 TEYLRYYYAAKINGSMEDLDLNLDDFVAKVNSDLIGKYINIASRCAGFIAKKFDGKL--- 418 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 GA T+ S + EI ++ + + RAL +++ L ++Y QKPWEL K Sbjct: 419 GA-TDLAASAEFQTAYASGEIAKSFEARDFARALREIMRLADVANQYIAEQKPWELAKQE 477 Query: 441 PDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 A + + R L + L+ +P LA ++ L +A Sbjct: 478 GAEAQLHIACSTAMTLFRDLTLYLKPVLPVLAGQVEAFLNIA 519 >gi|198284383|ref|YP_002220704.1| methionyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666133|ref|YP_002427048.1| methionyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] gi|226695270|sp|B7J7Y5|SYM_ACIF2 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|226695271|sp|B5ENA8|SYM_ACIF5 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|198248904|gb|ACH84497.1| methionyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518346|gb|ACK78932.1| methionyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 678 Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 130/509 (25%), Positives = 220/509 (43%), Gaps = 42/509 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + ++ I++A+ Y N H+GH E D+ AR+ RL G D ++ D HG I AQ Sbjct: 2 KRRILITSALPYANGPIHLGHLVEYTQTDIWARYQRLRGHDCVYVCADDAHGTPIMLRAQ 61 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK----------- 111 + G+T + + + + + RD I +D + T + + + +++ Sbjct: 62 SEGITPEELITRMHGDHLRDFTG-FGIRFDLYHSTHSPENFEISQSIYRALRAADYINVR 120 Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME---------- 161 +I D G + +R G + A ++P + Sbjct: 121 EIEQAYDPVAGIFLPDRFIRGTCPRCGAADQYGDSCEVCGATYSPTDLINPVSAVSGAVP 180 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 E YFF+L + D L + S L E +++ + GL D +SR +G Sbjct: 181 ERRNSEHYFFQLGDFSDFLRRWIHSG---TLQEEVAHKLDEWFSIGLSDWDISRDAPYFG 237 Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFH 271 I IPD P YVW+DAL Y+ T + G A +W D H IGKDI+ FH Sbjct: 238 IPIPDAPGKFFYVWLDALPGYMAATQHWCAAHGRNLADYWGPDSAAEIYHFIGKDIIYFH 297 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 ++WPA L + LP +F+HG + G K+SKS G I + ++ + + LRY++ Sbjct: 298 GLFWPAMLKGSGHRLPTGIFAHGHLTVNGAKMSKSRGTSITARQYLQHLNPEFLRYYIAT 357 Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ +D + + R N DL + NL SR+ I + + G + A D++ Sbjct: 358 KLNSHVEDIDLNLEDFLLRGNGDLVGKVVNLASRAAGFIHRSFAGRL---AASLGKDQAF 414 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448 + + I E + +A+ +++L +++ Y D PW L K S V+ Sbjct: 415 YDGLLQTQEAIGEAYAGREYGKAMRDIMALADQINAYVDQNAPWTLAKDPAQHESLHRVV 474 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477 VT+ R L LL +P+L+ K + L Sbjct: 475 TVTLNGFRVLITLLSPVLPELSRKALEFL 503 >gi|168205783|ref|ZP_02631788.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|170662677|gb|EDT15360.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] Length = 514 Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 127/495 (25%), Positives = 231/495 (46%), Gaps = 29/495 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ I A Y N HIG + D+LAR+HR G +V+F +G+D HG I A+ Sbjct: 2 KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + + +++ R F + L S++ F RT + H + + K + +KG IY+ Sbjct: 62 NKSPEELINKYHREFVRCFNKLGFSFNIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD---KLLSYYES 182 +Y + ++ + +G N ++ V+ FF+LS +QD +L ES Sbjct: 122 EFYCPKCCDTLDEFGIKEGL----CNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQYIMYVWIDALTNY 238 E + I +R +++ GL+D L+R+ +WGI++P +D + +YVWIDAL Y Sbjct: 178 WRENAIKITKR-----YLEGGLRDKILTRE-INWGIEVPIEGFEDKR--VYVWIDALLAY 229 Query: 239 LTTTGYLDNPDG-SKAKFWPADLHVI----GKDILRFHAIYWPAFLLSANLPLPK-KVFS 292 +T + + G S ++W + I GK+ + FH +PA L L + ++FS Sbjct: 230 VTASKKVIEEKGQSLEEYWNNEDSRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFS 289 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 ++ +G+ S + I ++E +D++RY+L+ A K+ + N Sbjct: 290 SQYLTLEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNN 349 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 +L IGN +R ++ I K+++G I E ++ R + +N + Sbjct: 350 ELVGEIGNFTNRVLTFIKKNFNGQIKGE----ELPLQWKNIIRRTYASVGNKFENGELKS 405 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + ++ +L+ + + +FD KPW L N + VLY+ +++ L L+ +P K Sbjct: 406 GVKEMFNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICSQILVALTDLMNPIIPFTCEK 465 Query: 473 IFDILFVADENRCFQ 487 I L + D F+ Sbjct: 466 IKMFLGIKDTKWSFE 480 >gi|169343242|ref|ZP_02864253.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] gi|169298540|gb|EDS80621.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] Length = 514 Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 126/493 (25%), Positives = 227/493 (46%), Gaps = 25/493 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ I A Y N HIG + D+LAR+HR G +V+F +G+D HG I A+ Sbjct: 2 KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + + +++ R F + L S+D F RT + H + + K + +KG IY+ Sbjct: 62 NKSPEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD---KLLSYYES 182 +Y + ++ + +G N ++ V+ FF+LS +QD +L ES Sbjct: 122 EFYCPKCCDTLDEFGIKEGL----CNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT 240 E + I +R +++ GL+D L+R+ +WGI++P + +YVWIDAL Y+T Sbjct: 178 WRENAIKITKR-----YLEGGLRDKILTRE-INWGIEVPAEGFEDKRVYVWIDALLAYVT 231 Query: 241 TTGYLDNPDG-SKAKFWPADLHVI----GKDILRFHAIYWPAFLLSANLPLPK-KVFSHG 294 + + G S ++W + I GK+ + FH +PA L L + ++FS Sbjct: 232 ASKKVIEEKGQSLEEYWNNEESRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFSSQ 291 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 ++ +G+ S + I ++E +D++RY+L+ A K+ + N +L Sbjct: 292 YLTLEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNNEL 351 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 IGN +R ++ I K+++G I E ++ R + + + Sbjct: 352 VGAIGNFTNRVLTFIKKNFNGEIKGE----ELPLQWKNIIRRTYASVGNKFEEGEFKSGV 407 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 ++ +L+ + + +FD KPW L N + VLY+ +++ L L+ +P KI Sbjct: 408 KEIFNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICSQILVALTDLMNPIIPFTCEKIK 467 Query: 475 DILFVADENRCFQ 487 L + D F+ Sbjct: 468 MFLGIKDTKWSFK 480 >gi|170703076|ref|ZP_02893899.1| methionyl-tRNA synthetase [Burkholderia ambifaria IOP40-10] gi|170132017|gb|EDT00522.1| methionyl-tRNA synthetase [Burkholderia ambifaria IOP40-10] Length = 720 Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 134/516 (25%), Positives = 224/516 (43%), Gaps = 45/516 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K +D+ + D +S+D+F T + ++ + + G I + Sbjct: 77 KEGLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSENIYLALKENGLIAERA 136 Query: 124 YSGWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME----------- 161 Y E + D E K G + + + + P + + Sbjct: 137 IEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPYSVVSGATPV 196 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214 YFFRLS + S+ + E N++ ++ ++ L D +SR Sbjct: 197 RKTSTHYFFRLS--DPRCESFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDAP 254 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268 +G +IP P YVW+DA Y + L + +G W H IGKDIL Sbjct: 255 YFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDREGIDFDAWIRAGSTAEQYHFIGKDIL 314 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327 FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LRY Sbjct: 315 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRY 374 Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ A +D + D + RVN+DL N+ SR+ ++K +DG + + Sbjct: 375 YFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAM 430 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444 + +++ + I + + + RAL Q + L EV+ Y D KPWEL K N Sbjct: 431 NHPLVAKLRDAIASIAAHYEAREYSRALRQTMELADEVNAYVDGAKPWELAKDPANAVAL 490 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + VA Sbjct: 491 HETCSVSLEAFRLLSLALKPVMPRVAEAVEAFFGVA 526 >gi|237798783|ref|ZP_04587244.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021636|gb|EGI01693.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 495 Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 130/503 (25%), Positives = 219/503 (43%), Gaps = 44/503 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + +D D + +D+F T + + +++K++ D G I Sbjct: 61 RAEKEGITPEQLIDNVKAEHSADFDDFLVDFDNFHSTHSDENRELSSMIYKRLRDAGHIA 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM-------- 160 + ++ + D KG A+ QY A + P Sbjct: 121 TRSVTQYFDPEKNMFLAD-RFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAISG 179 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + + +FF L A+ L S+ S L N++ ++ SGL+ +SR Sbjct: 180 ATPVLKDSKHFFFDLPAFDTLLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKDI 267 +G +IPD+P YVW+DA Y+ + L PD +W D H IGKDI Sbjct: 237 YFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L ANL P + HG++ G+K+SKS G I ++ + + LRY Sbjct: 297 VNFHALFWPAMLEGANLRKPTAINVHGYLTVNGQKMSKSRGTFIKARTYLDHLSPEYLRY 356 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 357 YYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVQANAAPEL 416 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRA 444 ++ L+ I + + + RA+ + ++L + Y + PW L K D Sbjct: 417 TDAFLAAAP----GIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEV 472 Query: 445 STVLYVTVEVIRQLAILLQAFVP 467 V + + + RQL I L+ +P Sbjct: 473 QAVCALGINLFRQLVIFLKPVLP 495 >gi|161501798|ref|NP_761825.2| methionyl-tRNA synthetase [Vibrio vulnificus CMCP6] gi|61216347|sp|Q8D8F2|SYM_VIBVU RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|319999503|gb|AAO11352.2| Methionyl-tRNA synthetase [Vibrio vulnificus CMCP6] Length = 690 Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 141/542 (26%), Positives = 231/542 (42%), Gaps = 60/542 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 10 QRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNIVNFICADDAHGTPIMLKAQ 69 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ + + S + DIS+D++ T + + ++ ++ G I Sbjct: 70 QMGMSPEEMIAAVSIEHQKDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRT 129 Query: 124 YSGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM----- 160 S + E + D V KG A G+ Y+ NP + Sbjct: 130 ISQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 188 Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + E +FF L ++ L + S L E N++ + +SGL+ +SR +G Sbjct: 189 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQTETANKMQEWFESGLQQWDISRDAPYFG 245 Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRF 270 +IP + YVW+DA Y+ + L + D ++W D H IGKDI+ F Sbjct: 246 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKDSKTELYHFIGKDIVYF 305 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L + P VF HG++ G K+SKS G + +E + + LRY+ Sbjct: 306 HSLFWPAMLDGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYA 365 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 ++ D + + +RVNAD+ N I NL SR+ I K ++G + E Sbjct: 366 AKLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLAENFVEPELYNE 425 Query: 390 ILSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRAS 445 ++ R+ L E RE RA+ ++ +L + ++Y D + PW + K Sbjct: 426 FVAAADRIAELYEARE------FGRAIRELTALADKANQYVDEKAPWVVAKQEGKDQELQ 479 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL------------FVADENRCFQSLDQRL 493 + V + + R L L+ +P LA + L A E F++L R+ Sbjct: 480 EICSVGINLFRVLMTYLKPVMPALAARTEAFLNEELTWEGVAQPLTAHEITAFKALFNRI 539 Query: 494 KP 495 P Sbjct: 540 DP 541 >gi|254496016|ref|ZP_05108919.1| methionyl-tRNA synthetase [Legionella drancourtii LLAP12] gi|254354765|gb|EET13397.1| methionyl-tRNA synthetase [Legionella drancourtii LLAP12] Length = 566 Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 131/509 (25%), Positives = 219/509 (43%), Gaps = 49/509 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M K+ +++A+ Y N H+GH E I D+ R H++ G+ + G D HG I Sbjct: 14 MATERKMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMSGIQCISVCGDDAHGTPIML 73 Query: 61 AAQNAGVTTKVFVD----QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116 A+ G+T + + ++F+ A I YD + T + ++ K+ Sbjct: 74 KAEQMGITPEALTTAIKISHEQDFQGFA----IDYDCYHTTHSPENQALASAIYAKLQAG 129 Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME---- 161 G I K Y E + D V GA QY A + P ++ Sbjct: 130 GTIVKKTIRQAYDPLKEMFLPDRYVKGTCPKCGAKDQYGDNCEVCGATYAPTDLIDAVSA 189 Query: 162 ----------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211 E YFF L ++ L + + L E N++ + +GLK +SR Sbjct: 190 ISGAKPIEKDSEHYFFDLPRFETLLKEWTRNGH---LQTEVANKLDEWFAAGLKQWDISR 246 Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGK 265 +G IP YVW+DA Y+ + Y D S A+FW D H +GK Sbjct: 247 DAPYFGFPIPGTIGKYFYVWLDAPIGYMASFKKYCDEHGVSFAEFWDKDSQAELYHFVGK 306 Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 DI+ FHA++WPA L +++ LP V++HGF+ G+K+SKS G ++ +E + + L Sbjct: 307 DIVYFHALFWPAMLAASDHRLPTAVYTHGFLTVDGQKMSKSRGTFLEARTYLEHLNPEYL 366 Query: 326 RYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 RY+ ++ D + + R+NADL + N+ SR I K +D + + Sbjct: 367 RYYYAAKLNGRVDDLDLNFEDFTNRINADLVGKVVNIASRCAGFINKRFDNRLSS----N 422 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 S+ + + + I E ++ RA+ ++ +V++Y D KPW L K A Sbjct: 423 LSEPQLYTDLLNMRPTIIEAYVSRDYARAIRLIMDCADKVNQYIDTHKPWVLAKEEGRLA 482 Query: 445 ST--VLYVTVEVIRQLAILLQAFVPKLAN 471 + + + + R L L+ +P +A Sbjct: 483 EVQDICTMGINLFRILMTYLKPVLPLMAQ 511 >gi|113969995|ref|YP_733788.1| methionyl-tRNA synthetase [Shewanella sp. MR-4] gi|123130483|sp|Q0HJN6|SYM_SHESM RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|113884679|gb|ABI38731.1| methionyl-tRNA synthetase [Shewanella sp. MR-4] Length = 676 Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 128/507 (25%), Positives = 234/507 (46%), Gaps = 47/507 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ +R+ +L G + + D HG I AQ Sbjct: 5 QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + + Q N + +D AD +I++D++ T + + ++ K+ G I Sbjct: 65 QLGMAPEEMIAQVNKEHQQDFAD-FNIAFDNYHSTHSEENRVLASDIYLKLRANGYIKSK 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160 S + +++ + D KG + QY A ++P + + Sbjct: 124 SISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAVSGAT 182 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + E +FF L A++D L + S L E N++ + + GL+ ++R + Sbjct: 183 PVMKDTEHFFFDLPAFEDMLKEWTRSG---ALQTEMANKLDEWFEQGLQQWDITRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269 G +IPD P YVW+DA Y+ + L P+ S +FW D H IGKDI+ Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRPELSFDEFWAKDSKAEVYHFIGKDIVY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH+++WPA L + P V++HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +RVN+DL + NL SR+ I K +DG + T +D Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKIADTTLTDA 419 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR--AST 446 + ++I E + + +A+ ++++L + + PW+L K + + A Sbjct: 420 FLAKQ-----EQIAEFYETREYGKAMREIMALADIANGFVADAAPWQLVKQDDQQEVAHQ 474 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKI 473 V + + R L L+ +P+LA + Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLAQDV 501 >gi|193212895|ref|YP_001998848.1| methionyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327] gi|193086372|gb|ACF11648.1| methionyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327] Length = 703 Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 130/521 (24%), Positives = 233/521 (44%), Gaps = 55/521 (10%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++TA+ Y N H+GH A + AD+ R+ RL G DV+ G+DEHG I A Sbjct: 6 QRTLVTTALPYANGPVHLGHLAGVYLPADIYVRYKRLCGHDVIHIGGSDEHGVPITITAD 65 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ + VD+ + D IS+D + RT+ HH+T R + +I KG K Sbjct: 66 KEGISPQDVVDRYHKMNADAFARCGISFDYYGRTSGPVHHETAREFFSEIEKKGIFVKKT 125 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWMEEEG-------- 164 ++ + + +D + GA+G + +P + ++ + Sbjct: 126 EKQFFDPKAGRFLSDRYITGTCPVCKTPGANGDQCEQCGTHLSPTELIDPKSKLSDATPE 185 Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLSRKTF 214 ++F L YQ +L ++ E H + R+ V+++ ++ GL D +++R F Sbjct: 186 LRETLHWYFPLGRYQKQLEAFVERHTG-----DWRSNVVNYSRTWLNQGLADRAITRDLF 240 Query: 215 DWGIKIPDDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD----LHVI 263 WGI +P D + ++YVW DA+ Y++ T G ++W ++ I Sbjct: 241 -WGISLPLDSEEAKGKVLYVWFDAVLGYISFTKEWAEKQGDSELWRRYWQDPETRIINFI 299 Query: 264 GKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316 GKD + FH + +PA L++ N L V + F+ +G K SKS + E Sbjct: 300 GKDNVVFHTLMFPAILMAWNEGRSEGRYELADNVPASEFMNFEGRKFSKSRNYAVYLGEF 359 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 +E D LRY + KD + + R N +LA+ +GN + RS+ + G Sbjct: 360 LERFPADTLRYSIAMNYPENKDTDFSWSDFQNRTNGELADTLGNFIKRSIDFTNSRFGGE 419 Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 +P D + + ++ + A AQ + + +RY +PW++ Sbjct: 420 VPADIDLEAWDGLGIDWLAS-FGKLEAAYEGFHFREATAQAMEIARFANRYLTESEPWKV 478 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K +P+ A + V++ + LA+L VP+ AN+I+ +L Sbjct: 479 IKVDPEAAGRTMAVSLNLCHTLALLFWPIVPETANRIWKML 519 >gi|254481396|ref|ZP_05094641.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] gi|214038559|gb|EEB79221.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] Length = 704 Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 132/511 (25%), Positives = 227/511 (44%), Gaps = 61/511 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E + D+ RF R G D L+ D HG I AA+ Sbjct: 30 KILVTSALPYANGPLHLGHMLEQVQTDIWVRFQRSRGHDCLYVCADDAHGTAIMLAAEKL 89 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ R+ D + L I + +F T + + ++ ++ I Sbjct: 90 GITPEQHIESMRERHMHDSSGFL-IDFANFYSTHTEENRKWSEDIYGRLKANNHIASRTI 148 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160 + + E + D KG A+ QY A ++P + Sbjct: 149 TQAFDPEKELFLAD-RFIKGTCPRCKAEDQYGDNCESCGATYSPSDLIDPVSAISGATPV 207 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E + FF+L ++ L + +S L + N++ + +GL++ +SR +G Sbjct: 208 DKESKHLFFKLPEFEAMLKQWLDSD---TLQPQVANKLREWTDAGLQEWDISRDAPYFGF 264 Query: 219 KIPDDPQYIMYVWIDA-------LTNYLTTTG-----YLDNPDGSKAKFWPADLHVIGKD 266 +IP + YVW+DA NY TG Y++ P G + H IGKD Sbjct: 265 EIPGETGKYFYVWLDAPIGYIASFDNYCQRTGHNFDEYIE-PGGDTELY-----HFIGKD 318 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FH ++WPA L SA L P +F+HGF+ G K+SKS G I+ +E + + LR Sbjct: 319 IINFHGLFWPAMLHSAGLRTPTAIFAHGFLTVNGTKMSKSRGTFINASTYLEHLDAEYLR 378 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ +++ D + D +RVN+D+ + N+ SR + K +D + A + Sbjct: 379 YYYAAKLSNSVDDIDLNTDDFTQRVNSDVVGKVVNIASRCAGFLRKGFDNTLSPECAEPQ 438 Query: 386 SDESILSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 ++ + L E RE ++A+ ++I+L ++Y D +KPW L K + Sbjct: 439 LLADFIAAGDNIAALYEQRE------FNKAIREIIALADRANQYIDDKKPWVLVKEEGQK 492 Query: 444 AS--TVLYVTVEVIRQLAILLQAFVPKLANK 472 A V V + + R L L+ +P +A K Sbjct: 493 AEVHAVCSVGINLFRVLMTYLKPVLPAMAAK 523 >gi|110799452|ref|YP_697210.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|168209761|ref|ZP_02635386.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] gi|110674099|gb|ABG83086.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|170712061|gb|EDT24243.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] Length = 514 Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 126/489 (25%), Positives = 228/489 (46%), Gaps = 29/489 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ I A Y N HIG + D+LAR+HR G +V+F +G+D HG I A+ Sbjct: 2 KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + + +++ R F + L S+D F RT + H + + + K + +KG IY+ Sbjct: 62 NKSPEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEEQVKYIIKSLYNKGFIYEKETE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD---KLLSYYES 182 +Y + ++ + +G N ++ V+ FF+LS +QD +L ES Sbjct: 122 EFYCPKCCDTLDEFGIKEGL----CNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQYIMYVWIDALTNY 238 E + I +R +++ GL+D L+R+ +WGI++P +D + +YVWIDAL Y Sbjct: 178 WRENAIKITKR-----YLEGGLRDKILTRE-INWGIEVPIEGFEDKR--VYVWIDALLAY 229 Query: 239 LTTTGYLDNPDG-SKAKFWPADLHVI----GKDILRFHAIYWPAFLLSANLPLPK-KVFS 292 +T + + G S ++W + I GK+ + FH +PA L L + ++FS Sbjct: 230 VTASKKVIEEKGQSLEEYWNNEESRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFS 289 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 ++ +G+ S + I ++E +D++RY+L+ A K+ + N Sbjct: 290 SQYLTLEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNN 349 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 +L IGN +R ++ I K+++G I E ++ R + + Sbjct: 350 ELVGEIGNFTNRVLTFIKKNFNGEIKGE----ELPLQWKNIIRRTYASVGNKFEEGEFKS 405 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + ++ +L+ + + +FD KPW L N + VLY+ +++ L L+ +P K Sbjct: 406 GVKEIFNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICSQILVALTDLMNPIIPFTCEK 465 Query: 473 IFDILFVAD 481 I L + D Sbjct: 466 IKMFLGIKD 474 >gi|257076299|ref|ZP_05570660.1| methionyl-tRNA synthetase [Ferroplasma acidarmanus fer1] Length = 721 Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 139/527 (26%), Positives = 242/527 (45%), Gaps = 46/527 (8%) Query: 3 EREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 EREK+ ++ A+ Y N H+GH A + AD+ RF+R+ G +VLF +G+DE+G I + Sbjct: 22 EREKILVNCALPYANGPLHLGHIAGAYLGADIFVRFNRMSGNEVLFISGSDEYGTPITIS 81 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ V + D+ + + LDI +D F RT++ H + + +KG + K Sbjct: 82 AEKNHVPPQEIADKYHIEQINSFNSLDIIFDKFTRTSDPEHVKDVDEFFINLLEKGYLVK 141 Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWME--- 161 + + + D + YK A G Q N NPV M Sbjct: 142 RYMISPFCVEINKFMPDRYIEGECPYCGYKEARGDQCDNCGQTLDPIELINPVCKMTGNS 201 Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + +F +L + Q+KL + +S + + + + +F+ GL +++R DW Sbjct: 202 PIFKVTDHFFLKLDSLQEKLSEFIDSKTYWRPNVLKFTQ--NFIGEGLHPRAITRD-LDW 258 Query: 217 GIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP--------ADLHVIGKD 266 G+KIP +YVW +AL Y+T G K ++W + IGKD Sbjct: 259 GVKIPLKGYENKKIYVWFEALIGYITGARVYSEETG-KPEYWKEFWMDKNIKSYYFIGKD 317 Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 + FH I WPA LL+ LP V ++ ++ +GEK SKS G E+++ V ++L Sbjct: 318 NIPFHTIIWPAMLLAHGGFNLPYNVPANEYLRFEGEKFSKSRGIGFTVDEMLKFVDKNSL 377 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFT 384 RY++ + D + + + +VN++L + GN + R S I K +G+ P P Sbjct: 378 RYYMASVLPETGDSDFSMNEFQLKVNSELIDKYGNYIYRVESFIKK--NGLSPHEPETMD 435 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 D ++ E + I R ++ + +V + YF PW+L K + ++ Sbjct: 436 TKDMEMMKFLEDKFSEYSMEVSGIHIKRGISIWLEIVMAANNYFTESAPWKLIKEDTEKL 495 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSL 489 + LYV++++ + L +L +VP + I+ V++ EN F + Sbjct: 496 NEKLYVSLKIGQYLTAMLYPYVPSASESIWQTFGVSENLENATFNDV 542 >gi|91782348|ref|YP_557554.1| methionyl-tRNA synthetase [Burkholderia xenovorans LB400] gi|123063115|sp|Q143I7|SYM_BURXL RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|91686302|gb|ABE29502.1| methionyl-tRNA synthetase [Burkholderia xenovorans LB400] Length = 710 Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 138/515 (26%), Positives = 225/515 (43%), Gaps = 45/515 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG + A+ Sbjct: 16 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYVGADDTHGTPVMLRAE 75 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K +D+ + + D IS+D++ T + + ++ + + G I Sbjct: 76 KEGLTPKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRVLSENVYLALKEAGLIDARD 135 Query: 124 YSGWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME----- 161 Y E + D E K GA QY ++ NP + Sbjct: 136 IEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYLPTELINPYSVVSGATPV 195 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214 YFFRLS + ++ + + E N++ ++ ++ L D +SR Sbjct: 196 RKTSTHYFFRLS--DPRCENFLRAWVGGLAQPEATNKMREWLGDAGEAKLADWDISRDAP 253 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268 +G +IP P YVW+DA Y + L G W H IGKDIL Sbjct: 254 YFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAEKRGLDFDAWVRKGSKAEQYHFIGKDIL 313 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327 FH ++WPA L + P VF+HGF+ G K+SKS G I VIE + + LRY Sbjct: 314 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIETGLNPEWLRY 373 Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ + +D + D + RVN+DL N+ SR+ ++K +DG + + Sbjct: 374 YFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAM 429 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444 +L+ + +I N + + +RAL Q + L V+ Y D KPW+ K N Sbjct: 430 QHPLLASLRAAVPQIAANYEAREYNRALRQTMELADAVNAYVDTAKPWDQAKDPANGVAL 489 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 V++E R L++ L+ +PKLA + L + Sbjct: 490 HETCSVSIEAFRLLSLALKPVLPKLAEAVEGFLAI 524 >gi|296162307|ref|ZP_06845101.1| methionyl-tRNA synthetase [Burkholderia sp. Ch1-1] gi|295887461|gb|EFG67285.1| methionyl-tRNA synthetase [Burkholderia sp. Ch1-1] Length = 710 Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 138/515 (26%), Positives = 225/515 (43%), Gaps = 45/515 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG + A+ Sbjct: 16 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYVGADDTHGTPVMLRAE 75 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K +D+ + + D IS+D++ T + + ++ + + G I Sbjct: 76 KEGLTPKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRVLSENVYLALKEAGLIDARD 135 Query: 124 YSGWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME----- 161 Y E + D E K GA QY ++ NP + Sbjct: 136 IEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYLPTELINPYSVVSGATPV 195 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214 YFFRLS + ++ + + E N++ ++ ++ L D +SR Sbjct: 196 RKTSTHYFFRLS--DPRCENFLRAWVGGLAQPEATNKMREWLGDAGEAKLADWDISRDAP 253 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268 +G +IP P YVW+DA Y + L G W H IGKDIL Sbjct: 254 YFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAEKRGLDFDAWVRKGSKAEQYHFIGKDIL 313 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327 FH ++WPA L + P VF+HGF+ G K+SKS G I VIE + + LRY Sbjct: 314 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIETGLNPEWLRY 373 Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ + +D + D + RVN+DL N+ SR+ ++K +DG + + Sbjct: 374 YFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAM 429 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444 +L+ + +I N + + +RAL Q + L V+ Y D KPW+ K N Sbjct: 430 QHPLLASLRAAVPQIAANYEAREYNRALRQTMELADAVNAYVDTAKPWDQAKDPANGVAL 489 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 V++E R L++ L+ +PKLA + L + Sbjct: 490 HETCSVSIEAFRLLSLALKPVLPKLAEAVEGFLAI 524 >gi|114047230|ref|YP_737780.1| methionyl-tRNA synthetase [Shewanella sp. MR-7] gi|122944730|sp|Q0HVY2|SYM_SHESR RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|113888672|gb|ABI42723.1| methionyl-tRNA synthetase [Shewanella sp. MR-7] Length = 676 Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 128/504 (25%), Positives = 233/504 (46%), Gaps = 47/504 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ +R+ +L G + + D HG I AQ Sbjct: 5 QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + + Q N + +D AD +I++D++ T + + ++ K+ G I Sbjct: 65 QLGMAPEEMIAQVNKEHQQDFAD-FNIAFDNYHSTHSEENRVLASDIYLKLRANGYIKSK 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160 S + +++ + D KG + QY A ++P + + Sbjct: 124 SISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAVSGAT 182 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + E +FF L A++D L + S L E N++ + + GL+ ++R + Sbjct: 183 PVMKDTEHFFFDLPAFEDMLKEWTRSG---ALQTEMANKLDEWFEQGLQQWDITRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269 G +IPD P YVW+DA Y+ + L P+ S +FW D H IGKDI+ Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRPELSFDEFWAKDSKAEVYHFIGKDIVY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH+++WPA L + P V++HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +RVN+DL + NL SR+ I K +DG + T +D Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKIADTTLTDA 419 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446 + ++I E + + +A+ ++++L + + PW+L K + + A Sbjct: 420 FLAKQ-----EQIAEFYETREYGKAMREIMALADIANGFVADAAPWQLVKQDDQQEAAHQ 474 Query: 447 VLYVTVEVIRQLAILLQAFVPKLA 470 V + + R L L+ +P+LA Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLA 498 >gi|153839838|ref|ZP_01992505.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810] gi|149746645|gb|EDM57633.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810] Length = 499 Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 130/495 (26%), Positives = 216/495 (43%), Gaps = 46/495 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 12 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 71 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + + ++ ++ G I S Sbjct: 72 GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 131 Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160 + E + D D+ D G+ Y+ NP + Sbjct: 132 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 191 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + E +FF L ++ L + S L E N++ + +SGL+ +SR +G +I Sbjct: 192 DSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEI 248 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273 P + YVW+DA Y+ + L N D ++W D H IGKDI+ FH++ Sbjct: 249 PGEKDKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSL 308 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L + P VF HG++ G K+SKS G + ++ + + LRY+ ++ Sbjct: 309 FWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAKL 368 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + + +RVNAD+ N I NL SR+ I K ++G + A E ++ Sbjct: 369 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFVA 428 Query: 393 VCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448 R+ + E RE RA+ ++ +L + ++Y D + PW + K + Sbjct: 429 AADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEIC 482 Query: 449 YVTVEVIRQLAILLQ 463 V + + R L L+ Sbjct: 483 SVGINLFRVLMTYLK 497 >gi|33595447|ref|NP_883090.1| methionyl-tRNA synthetase [Bordetella parapertussis 12822] gi|68565998|sp|Q7W1D8|SYM_BORPA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|33565525|emb|CAE40164.1| methionyl-tRNA synthetase [Bordetella parapertussis] Length = 692 Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 141/553 (25%), Positives = 248/553 (44%), Gaps = 59/553 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 L+++TA+ Y N HIGH E I AD+ R R+ G V F D HG I A+ G Sbjct: 5 LFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEKEG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--------- 117 +T + V + + D I +D + T + + +++ + +G Sbjct: 65 ITPQALVARYAAERPRYLDGFHIRFDHWHSTDTPENVALSQEIYRALKSEGLIETRSIEQ 124 Query: 118 --DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------------E 161 D KG + ++ E + G + A + P + + Sbjct: 125 FYDPVKGMFLADRYIKGECPRCHAKDQYGDSCEVCGAVYAPTELINPYSALTGAAPVLKS 184 Query: 162 EEGYFFRLS-----AYQDKLLSYYESHPEFILPIERRNEVISFV-----KSGLKDLSLSR 211 + +FF+LS + + + L E + + ++ ++ L D +SR Sbjct: 185 SDHFFFKLSDPRCVEFLQQWTTGANRQGVKHLQAEVQAKTREWLGGDDGEAKLGDWDISR 244 Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPA----DLHVIGK 265 +GI+IPD P YVW+DA YL + G A PA +H IGK Sbjct: 245 DAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAAKGLDFDALLDPAGPTEQVHFIGK 304 Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA- 324 DI+ FHA++WPA L A P ++ HGFI GEK+SKS G I P+ + E+G+DA Sbjct: 305 DIIYFHALFWPAMLKFAGRKTPDQLNVHGFITVSGEKMSKSRGTGISPLRYL-EIGMDAE 363 Query: 325 -LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY++ ++ A +D ++ + RVN+DL N+ SR+ + I + +DG + A Sbjct: 364 WLRYYMAAKLNARVEDMDFNPEDFVARVNSDLVGKYVNIASRAAAFITRHFDGEL----A 419 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---- 438 + +++ + ++ + IR + + +RA+ ++++ +++ FDA +PW + K Sbjct: 420 YDGDTDALAAEFAQQAESIRAAFEAREYNRAVREIMAHADRINQAFDAAQPWVMAKGIGA 479 Query: 439 ---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF---QSLDQR 492 R + + + L+++L +P LA+++ LF A+ + + Q L QR Sbjct: 480 ADAATRARLQDICSRALAGFKALSVMLAPVLPALASRVARELFGANADFAWGDAQQLPQR 539 Query: 493 LKPGFMLHKTFDP 505 + P L + DP Sbjct: 540 VAPFKHLMQRVDP 552 >gi|229916147|ref|YP_002884793.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b] gi|229467576|gb|ACQ69348.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b] Length = 547 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 136/511 (26%), Positives = 227/511 (44%), Gaps = 43/511 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G DVL+ +G+D +G I A+ G Sbjct: 3 IFIGGAWVYANGSLHLGHISSLLSGDILARYYRSKGEDVLYVSGSDCNGTPITVRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 V+ D+ F L SYD + RT +HH+ + ++ ++ KG IYK Sbjct: 63 VSVTEIADRYHDEFVACYSSLGFSYDVYARTDHSQHHEVVQDIFAELYSKGFIYKKEVEQ 122 Query: 127 WYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME--------------E 162 Y + + D V +G + + P+ +E Sbjct: 123 AYCETCDQFLPDRYVEGTCPVCHGPSRGDQCDHCSTILEPLDLLEPRCKHCLNEPSTRST 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK----SGLKDLSLSRKTFDWGI 218 E ++F LS++Q L Y E+ L R IS K GL D ++SR G+ Sbjct: 183 EHFYFSLSSFQKFLEKYTENADRQSL---WRENAISLTKRYLQEGLHDRAVSRD-LSTGV 238 Query: 219 KIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADL---HVIGKDILRFHA 272 IP + +YVWI+A++ Y + + G+ +A FW +V GKD + FH+ Sbjct: 239 NIPILGYEEKKVYVWIEAISGYYSASRLWAQSVGADEATFWSNTTRAYYVHGKDNIPFHS 298 Query: 273 IYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 I WPA L + + LP + S+ ++ + K+S S + +++E D++RYFL Sbjct: 299 IIWPAILEALGDKALPTHIVSNEYLTLEKRKLSTSRNWAVWLPDMLERYEPDSIRYFLTI 358 Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 +D + NA+L GN V+R++ I K +D IP +E +E I Sbjct: 359 NAPENRDADFSWKEFIYSHNAELLGAYGNFVNRTLKFIEKSFDHSIPNDNISSEIEERI- 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451 S + E+ + +++ +AL + + ++YFD +PW K NP L Sbjct: 418 ---SNLYAEVGQLIEDTNFKQALELIFEAIRFSNKYFDQTQPWNTIKENPAECRQTLADC 474 Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADE 482 +I +L+ F+P + KI D + V E Sbjct: 475 TFLIVNFGNVLRPFLPFSSQKIRDAIEVDKE 505 >gi|33599829|ref|NP_887389.1| methionyl-tRNA synthetase [Bordetella bronchiseptica RB50] gi|68565999|sp|Q7WP45|SYM_BORBR RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|33567426|emb|CAE31339.1| methionyl-tRNA synthetase [Bordetella bronchiseptica RB50] Length = 692 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 140/558 (25%), Positives = 249/558 (44%), Gaps = 69/558 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 L+++TA+ Y N HIGH E I AD+ R R+ G V F D HG I A+ G Sbjct: 5 LFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEKEG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--------- 117 +T + V + + D I +D + T + + +++ + +G Sbjct: 65 ITPQALVARYAAERPRYLDGFHIRFDHWHSTDTPENVALSQEIYRALKSEGLIETRSIEQ 124 Query: 118 --DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------------E 161 D KG + ++ E + G + A + P + + Sbjct: 125 FYDPVKGMFLADRYIKGECPRCHAKDQYGDSCEVCGAVYAPTELINPYSALTGAAPVLKS 184 Query: 162 EEGYFFRLS-----AYQDKLLSYYESHPEFILPIERRNEVISFV-----KSGLKDLSLSR 211 + +FF+LS + + + L E + + ++ ++ L D +SR Sbjct: 185 SDHFFFKLSDPRCVEFLQQWTTGANRQGVKHLQAEVQAKTREWLGGDDGEAKLGDWDISR 244 Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG-----------YLDNPDGSKAKFWPADL 260 +GI+IPD P YVW+DA YL + L +P G + + Sbjct: 245 DAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAVKGLDFDALLDPAGPTEQ-----V 299 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 H IGKDI+ FHA++WPA L A P ++ HGFI GEK+SKS G I P+ + E+ Sbjct: 300 HFIGKDIIYFHALFWPAMLKFAGRKTPDQLNVHGFITVSGEKMSKSRGTGISPLRYL-EI 358 Query: 321 GVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 G+DA LRY++ ++ A +D ++ + RVN+DL N+ SR+ + I + +DG + Sbjct: 359 GMDAEWLRYYMAAKLNARVEDMDFNPEDFVARVNSDLVGKYVNIASRAAAFITRHFDGEL 418 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 A+ +++ + ++ + IR + + +RA+ ++++ +++ FDA +PW + Sbjct: 419 ----AYDGDTDALAAEFAQQAESIRAAFEAREYNRAVREIMAHADRINQAFDAAQPWVMA 474 Query: 438 K-------TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF---Q 487 K R + + + L+++L +P LA+++ LF A+ + + Q Sbjct: 475 KGIGAADAATRARLQDICSRALAGFKALSVMLAPVLPALASRVARELFGANADFAWGDAQ 534 Query: 488 SLDQRLKPGFMLHKTFDP 505 L QR+ P L + DP Sbjct: 535 QLPQRVAPFKHLMQRVDP 552 >gi|315223783|ref|ZP_07865632.1| methionine--tRNA ligase [Capnocytophaga ochracea F0287] gi|314946229|gb|EFS98229.1| methionine--tRNA ligase [Capnocytophaga ochracea F0287] Length = 688 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 134/510 (26%), Positives = 226/510 (44%), Gaps = 47/510 (9%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I+ A+ Y N HIGH A + AD+ AR+ RL DV F G+DEHG I+ A+ G Sbjct: 7 ITAALPYTNGPIHIGHLAGVYVPADIFARYQRLKNNDVAFICGSDEHGVAISIKAKKEGT 66 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + +D+ + IS+D++ RT+ HH T +KK+ ++GD + Sbjct: 67 TPQAIIDKYHAIIKQSFADFGISFDNYSRTSAPIHHQTASDFFKKLYEQGDFIEEISEQL 126 Query: 128 YSLRDEAYYNDDEVY----KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183 Y + D V K + + Y Q E G + D S S Sbjct: 127 YDEEAHQFLADRFVIGTCPKCGNPEAYGDQ------CERCGSSLNATDLIDPKSSITGSK 180 Query: 184 P------EFILPIERRNE-----------------VISFVKSGLKDLSLSR---KTFDWG 217 P + LP+ R E V VKS L D R + DWG Sbjct: 181 PTLKATKHWFLPLNRYQEFLEQWILEGHKSDWKPNVYGQVKSWLDDELKPRAVTRDLDWG 240 Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270 I +P + ++YVW DA Y+++T +G + + D +H IGKD + F Sbjct: 241 IPVPIEGAEGKVLYVWFDAPIGYISSTKEWAEREGKDWRPYWQDSDTQLVHFIGKDNIVF 300 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327 H I +PA L + + LP V ++ F+ + K+S S + E +++ D LRY Sbjct: 301 HCIIFPAMLKAEGSFILPANVPANEFLNLESNKLSTSKNWAVWLHEYLQDFPNQQDVLRY 360 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L KD + + R N +L GN ++R + K Y+G++P + D Sbjct: 361 VLTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVAVLTQKYYEGVVPQADTYNNVD 420 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 L + + +I ++++ A +++++ ++Y ++PW+L KT+P+R TV Sbjct: 421 TETLRQITELTDKIEQSLERYRFREAQQELMNMARLGNKYLADEEPWKLIKTDPERVKTV 480 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +Y+ +++ LA+ + F+P + K+ +L Sbjct: 481 MYIALQIATALAVASEPFLPFTSEKLKRML 510 >gi|288926899|ref|ZP_06420799.1| methionine--tRNA ligase [Prevotella buccae D17] gi|288336338|gb|EFC74719.1| methionine--tRNA ligase [Prevotella buccae D17] Length = 686 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 138/542 (25%), Positives = 249/542 (45%), Gaps = 51/542 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ ++ A+ Y N HIGH A + AD+ R+ RL +V+F G+DEHG I Sbjct: 3 KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQEVVFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + ++ + IS+D + RTT K H ++K+ D G + Sbjct: 63 RAKKEGITPQDVVDRYHKMIKESFEEFGISFDVYSRTTSKTHARLASDFFRKLYDDGKLV 122 Query: 121 KGCYSGWYS-----------LRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------- 160 + +Y + E + +E G + + +P++ + Sbjct: 123 EKETEQYYDEEAHQFLADRYIMGECPHCHNENAYGDQCEKCGSDLSPMELINPHSTISGS 182 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213 + + ++ L+ YQ L + + H E+ R V KS L D+ L + Sbjct: 183 KPVVRKTKNWYLPLNDYQGWLKQWILDEHKEW------RPNVYGQCKSWL-DMDLQPRAM 235 Query: 214 ---FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----L 260 DWGI +P + ++YVW DA Y++ T L + + GS K+W + + Sbjct: 236 TRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDREPEKWGSWEKWWKDEDTRLI 295 Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 H IGKD + FH I +P L + LP V ++ F+ + +KIS S + E + E Sbjct: 296 HFIGKDNIVFHCIIFPTMLKAHGGYILPDNVPANEFLNLEDDKISTSRNWAVWLHEYLRE 355 Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 + D LRY L KD + ++R N++L GN V+R++ + K +DG++ Sbjct: 356 LPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYWDGVV 415 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G E D+ + V +++ + A + ++L ++Y +PW++ Sbjct: 416 PACGELLEVDQQTIHEFKDVQEKVEGYLDAFKFREAQKEAMNLARIGNKYITECEPWKVW 475 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497 KT+P R T+LY++++++ LAI + F+P + K+ ++ + + LKPG Sbjct: 476 KTDPKRVETILYISLQLVANLAIAFEPFLPFSSEKLRKLINMESFDWSRLGTTDLLKPGH 535 Query: 498 ML 499 L Sbjct: 536 QL 537 >gi|117621300|ref|YP_856757.1| methionyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|187645704|sp|A0KKF6|SYM_AERHH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|117562707|gb|ABK39655.1| methionyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 677 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 130/502 (25%), Positives = 223/502 (44%), Gaps = 43/502 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ A+ Y N H+GH E I AD+ R+ R+ G V F D HG I AQ G Sbjct: 8 MLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHQVHFVCADDAHGTPIMLKAQQLG 67 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + + S+ + +IS+D++ T + + +++ ++ G I S Sbjct: 68 ITPEEMIAAVSKEHQADFAGFNISFDNYHSTHSDENRELAELIYGRLQAGGKIKSRTISQ 127 Query: 127 WYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------------- 161 + +++ + D KG + QY A ++P + ++ Sbjct: 128 LFD-PEKSMFLPDRFVKGTCPKCKSPEQYGDNCDSCGATYSPTELIDPKSAVSGATPVMK 186 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E +FF L ++ L + + E N++ + +SGL+ ++R +G +I Sbjct: 187 DSEHFFFDLPQFEKWLAEWVRG--SGAIQEEMANKMQEWFESGLQQWDITRDAPYFGFEI 244 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273 P P YVW+DA Y+ + L N D +W AD H IGKDI FH + Sbjct: 245 PGAPGKYFYVWLDAPIGYMASFKNLCNKRRDIDFDSYWKADSEAELYHFIGKDIAYFHCL 304 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WP+ L A P KV HG++ G K+SKS G I + + + LRY+ ++ Sbjct: 305 FWPSMLEGAGFRKPTKVNVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYYAAKL 364 Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + D RVNAD+ N + NL SR+ I K +DG + A T ++ + + Sbjct: 365 NSRIDDLDLNLDDFVARVNADVVNKLVNLASRNAGFIAKRFDGKL----AATCAEPELYA 420 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450 + I E +++ RA+ ++++L + +RY D + PW + K A V V Sbjct: 421 EFANSRTAIAEAYESREFSRAIREIMALADKANRYVDDKAPWVIAKQEGADAELQAVCSV 480 Query: 451 TVEVIRQLAILLQAFVPKLANK 472 + + R L L+ +P LA + Sbjct: 481 GINLFRVLMAYLKPVMPLLAER 502 >gi|307611755|emb|CBX01463.1| methionyl-tRNA synthetase [Legionella pneumophila 130b] Length = 664 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 138/541 (25%), Positives = 239/541 (44%), Gaps = 53/541 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + +++A+ Y N H+GH E I D+ R H++ G+ + G D HG I A+ G Sbjct: 1 MLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIMLKAEQLG 60 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 +T + + + I YD + T + +++++ GDI K Sbjct: 61 ITPEALTAEIKLSHEKDFKAFAIDYDYYHTTHSPENQALATTIFERLQAGGDIVKKTIRQ 120 Query: 127 WYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM--------------E 161 +Y + + D V G + + A ++P + E Sbjct: 121 FYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSVISGASPVEKE 180 Query: 162 EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E YFF L Y++ L + + H L E N++ + ++GLK +SR +G I Sbjct: 181 SEHYFFDLPRYEELLKDWTRKGH----LQTEVTNKLSEWFEAGLKQWDISRDAPYFGFPI 236 Query: 221 PDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274 P P YVW+DA Y+ + Y D S +FW H +GKDI+ FHA++ Sbjct: 237 PGVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKASKTELYHFVGKDIVYFHALF 296 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L ++ P V++HGF+ +G+K+SKS G I+ + + + LRY+ ++ Sbjct: 297 WPAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEYLRYYFAAKLN 356 Query: 335 CGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 G+ D + D RVNADL + N+ SR I K +D + + + +LS Sbjct: 357 -GRVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRLSSELNDPKLHNDLLS 415 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYV 450 V+ + ++ RA+ Q++ +V++Y DA KPW L K + + + + Sbjct: 416 ARESVI----DAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESKLNEVHAICTM 471 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--TFDPIFP 508 + + R L L+ +P +A + F+ E + S+D+ L + H+ TF P+ Sbjct: 472 GINLFRILITYLKPVLPMMAKASEE--FLNSEPLHWGSIDKPL----LNHRINTFKPLMV 525 Query: 509 R 509 R Sbjct: 526 R 526 >gi|117920207|ref|YP_869399.1| methionyl-tRNA synthetase [Shewanella sp. ANA-3] gi|187647774|sp|A0KW24|SYM_SHESA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|117612539|gb|ABK47993.1| methionyl-tRNA synthetase [Shewanella sp. ANA-3] Length = 676 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 128/504 (25%), Positives = 234/504 (46%), Gaps = 47/504 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ +R+ +L G + + D HG I AQ Sbjct: 5 QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + + Q N + +D AD +I++D++ T + + ++ K+ G I Sbjct: 65 QLGMAPEEMIAQVNKEHQQDFAD-FNIAFDNYHSTHSEENRVLASDIYLKLRANGYIKSK 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160 S + +++ + D KG + QY A ++P + + Sbjct: 124 SISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAVSGAT 182 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + E +FF L A++D L + S L E N++ + + GL+ ++R + Sbjct: 183 PVMKDTEHFFFDLPAFEDMLKEWTRSG---ALQTEMANKLDEWFEQGLQQWDITRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269 G +IPD P YVW+DA Y+ + L +P+ S +FW D H IGKDI+ Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKHPELSFDEFWAKDSKAEVYHFIGKDIVY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH+++WPA L + P V++HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +RVN+DL + NL SR+ I K +DG + T +D Sbjct: 360 AAKLSSRIDDLDLNLEDFVQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKIADTTLTDA 419 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446 + ++I E + + +A+ ++++L + + PW+L K + + A Sbjct: 420 FLAKQ-----EQIAEFYETREYGKAMREIMALADIANGFVADAAPWQLVKQDDQQETAHQ 474 Query: 447 VLYVTVEVIRQLAILLQAFVPKLA 470 V + + R L L+ +P+LA Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLA 498 >gi|315607117|ref|ZP_07882121.1| methionine--tRNA ligase [Prevotella buccae ATCC 33574] gi|315251171|gb|EFU31156.1| methionine--tRNA ligase [Prevotella buccae ATCC 33574] Length = 686 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 138/542 (25%), Positives = 249/542 (45%), Gaps = 51/542 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ ++ A+ Y N HIGH A + AD+ R+ RL +V+F G+DEHG I Sbjct: 3 KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQEVVFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + ++ + IS+D + RTT K H ++K+ D G + Sbjct: 63 RAKKEGITPQDVVDRYHKMIKESFEEFGISFDVYSRTTSKTHARLASDFFRKLYDDGKLV 122 Query: 121 KGCYSGWYS-----------LRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------- 160 + +Y + E + +E G + + +P++ + Sbjct: 123 EKETEQYYDEEAHQFLADRYIMGECPHCHNENAYGDQCEKCGSDLSPMELINPHSTISGS 182 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213 + + ++ L+ YQ L + + H E+ R V KS L D+ L + Sbjct: 183 KPVVRKTKNWYLPLNDYQGWLKQWILDEHKEW------RPNVYGQCKSWL-DMDLQPRAM 235 Query: 214 ---FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----L 260 DWGI +P + ++YVW DA Y++ T L + + GS K+W + + Sbjct: 236 TRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDREPEKWGSWEKWWKDEDTRLI 295 Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 H IGKD + FH I +P L + LP V ++ F+ + +KIS S + E + E Sbjct: 296 HFIGKDNIVFHCIIFPTMLKAHGGYILPDNVPANEFLNLEDDKISTSRNWAVWLHEYLRE 355 Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 + D LRY L KD + ++R N++L GN V+R++ + K +DG++ Sbjct: 356 LPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYWDGVV 415 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G E D+ + V +++ + A + ++L ++Y +PW++ Sbjct: 416 PACGELLEVDQQTIHEFKDVQEKVEGYLDAFKFREAQKEAMNLARIGNKYITECEPWKVW 475 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497 KT+P R T+LY++++++ LAI + F+P + K+ ++ + + LKPG Sbjct: 476 KTDPKRVETILYISLQLVANLAIAFEPFLPFSSEKLRKLINMESFDWSRLGATDLLKPGH 535 Query: 498 ML 499 L Sbjct: 536 QL 537 >gi|261404106|ref|YP_003240347.1| methionyl-tRNA synthetase [Paenibacillus sp. Y412MC10] gi|261280569|gb|ACX62540.1| methionyl-tRNA synthetase [Paenibacillus sp. Y412MC10] Length = 546 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 140/511 (27%), Positives = 230/511 (45%), Gaps = 51/511 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++I A Y N H+G ++ DVLAR+ R G VL+ +G+D HG +A A Sbjct: 3 NIFIGGAWPYANGSLHLGRLASLLPGDVLARYFRAKGDRVLYVSGSDCHGTPVAVQAIQE 62 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT D+ F + L SYD + RT + HH + L+ K+ D G +Y+ Sbjct: 63 GVTPGDIADRFHAEFAECFAQLGFSYDLYTRTDQAFHHGVVQELFLKLLDNGHLYRKTVL 122 Query: 126 GWYSLRDEAYYNDDEVYKG-------ADGQYYNAQH-----------------NPVQWME 161 Y D + D V A G +A NP Sbjct: 123 QTYCETDRRFLPDRYVEGNCPVCGSRARGDQCDACSTMLDPSDLTNRTCKICGNPPVERP 182 Query: 162 EEGYFFRLSAYQDKL---LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E ++ LS +Q +L L+ + + + + RR +++ GL+D + +R WG+ Sbjct: 183 TEHFYVSLSHFQAELADDLNNAQGWRDNAVHMTRR-----YLEEGLQDRAATRD-LTWGV 236 Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWP------ADLHVIGKDI 267 +P +D + +YVWI+A++ YL+ + + G FW +V GKD Sbjct: 237 DVPVPGFEDKK--IYVWIEAVSGYLSASKQWAAETGGDWESFWRKGKGEVTAYYVHGKDN 294 Query: 268 LRFHAIYWPAFLLSA-NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 + FH + WPA L A +L P ++ S ++ +G+K S S I +++ D++R Sbjct: 295 IPFHTLIWPALLKGAGDLHQPDRIISCEYMTLEGKKFSTSRNWAIWVPDLLSRYQPDSVR 354 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 YFL+ +D + N +L GNLV+R++ K +DG +P G+ S Sbjct: 355 YFLLANGPEKRDADFSWREFIHSHNGELLGAFGNLVNRTLVFANKSFDGKVPE-GSI--S 411 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 DE V + +E ++ + AL + S+V + ++YFD +KPW K + T Sbjct: 412 DEWQGRV-EELYREAGALIEEGRLKEALELIFSVVRQANKYFDERKPWIQVKEDRAACGT 470 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 LY + ++ LA LLQ F+P ++I D L Sbjct: 471 TLYTCILIMANLANLLQPFIPFSCDRIRDFL 501 >gi|229135869|ref|ZP_04264636.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196] gi|228647578|gb|EEL03646.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196] Length = 544 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 128/507 (25%), Positives = 232/507 (45%), Gaps = 45/507 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEHVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K D+ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTVKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q ++ E + R N + ++K GL+D ++SR G+ Sbjct: 183 EHFYFALHKFQQQIKEAVEIAKQ--KGTWRDNAIQLTERYLKEGLQDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271 IP +D + ++VWI+A+T Y + + + G +FW D +V GKD + FH Sbjct: 240 IPVAGYEDKK--IHVWIEAVTGYYSASKHWAEETGKDDQEFWDRDAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 +I WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G +P E + + Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGTVPKGSIDVELKDKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 418 ----EGLYKSVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477 V +I A LL+ F+P + ++ + L Sbjct: 474 CVYLIANFAQLLEPFLPFSSERVRNTL 500 >gi|187923016|ref|YP_001894658.1| methionyl-tRNA synthetase [Burkholderia phytofirmans PsJN] gi|187714210|gb|ACD15434.1| methionyl-tRNA synthetase [Burkholderia phytofirmans PsJN] Length = 711 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 139/515 (26%), Positives = 225/515 (43%), Gaps = 45/515 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG I A+ Sbjct: 16 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYVGADDTHGTPIMLRAE 75 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K +D+ + + D IS+D++ T + + ++ + + G I Sbjct: 76 KEGLTPKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRILSENVYLALKEAGLIDARD 135 Query: 124 YSGWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME----- 161 Y E + D E K GA QY ++ NP + Sbjct: 136 IEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYLPTELINPYSVVSGATPI 195 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214 YFFRLS + ++ + + E N++ ++ ++ L D +SR Sbjct: 196 RKTSTHYFFRLS--DPRCENFLRAWVGGLAQPEATNKMREWLGDAGEAKLADWDISRDAP 253 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268 +G +IP P YVW+DA Y + L G W H IGKDIL Sbjct: 254 YFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAEKRGLDFDAWVRKGSTAEQYHFIGKDIL 313 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327 FH ++WPA L + P VF+HGF+ G K+SKS G I VI+ + + LRY Sbjct: 314 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIDTGLNPEWLRY 373 Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ + +D + D + RVN+DL N+ SR+ ++K +DG + + Sbjct: 374 YFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAM 429 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444 +L+ + +I N + + +RAL Q + L V+ Y D KPW+ K N Sbjct: 430 QHPLLASLRAAVPQIAANYEAREYNRALRQTMELADAVNAYVDTAKPWDQAKDPANGVAL 489 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 V++E R L++ L+ +PKLA + L V Sbjct: 490 HETCTVSIEAFRLLSLALKPVLPKLAEAVEGFLGV 524 >gi|282880479|ref|ZP_06289186.1| methionine--tRNA ligase [Prevotella timonensis CRIS 5C-B1] gi|281305582|gb|EFA97635.1| methionine--tRNA ligase [Prevotella timonensis CRIS 5C-B1] Length = 687 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 137/520 (26%), Positives = 244/520 (46%), Gaps = 51/520 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ ++ A+ Y N HIGH A + AD+ AR+ RL +V+F G+DEHG I Sbjct: 4 KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYARYLRLKNQEVIFIGGSDEHGVPITI 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + IS+D + RTT K H +KK+ ++G + Sbjct: 64 RAKKEGITPQDVVDRYHSMIKKSFEEFGISFDVYSRTTSKTHEQLASDFFKKLLEEGKLQ 123 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWM--------- 160 + +Y + D + Y GA G ++ +P++ + Sbjct: 124 EQESEQYYDEEAHQFLADRYIKGECPHCHYDGAYGDQCEHCGTALSPLELINPTSTLSGS 183 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213 + + ++ L+ YQ L + + H E+ R+ V KS L DL L + Sbjct: 184 KPVIKKTKNWYLPLNDYQQWLKEWILQGHKEW------RSNVYGQCKSWL-DLDLQPRAM 236 Query: 214 ---FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYL--DNPD--GSKAKFWPAD----L 260 DWGI +P + ++YVW DA Y++ T L P+ GS K+W + + Sbjct: 237 TRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCEQAPERWGSWEKWWKDEDTRLV 296 Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 H IGKD + FH + +P L + LP V ++ F+ + +KIS S + E + + Sbjct: 297 HFIGKDNIVFHCLIFPTMLKAHGGYILPDNVPANEFLNLENDKISTSRNWAVWLHEYLVD 356 Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 + D LRY L KD + ++ N++L GN V+R++ + K ++G++ Sbjct: 357 LPGKQDVLRYVLTANAPETKDNNFTWKDFQEHNNSELVGIYGNFVNRALQLTKKYFEGVV 416 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G + D+ L V Q++ + A + ++L ++Y +PW++ Sbjct: 417 PACGELLDIDKQTLEEFKDVKQKVETLLDAFRFRDAQKEAMNLARIGNKYITECEPWKVW 476 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 KTNP+R T+LYV+++++ LAI + F+P + K+ ++ Sbjct: 477 KTNPERVKTILYVSLQLVANLAIAFEPFLPFSSKKLRQLI 516 >gi|108805422|ref|YP_645359.1| methionyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941] gi|122975770|sp|Q1AST1|SYM_RUBXD RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|108766665|gb|ABG05547.1| methionyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941] Length = 577 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 131/526 (24%), Positives = 232/526 (44%), Gaps = 59/526 (11%) Query: 1 MKEREKLY-ISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQ 56 M ER + Y +++A+ Y N H+GH AY + AD+ R+ R+ G DV++ GTDEHG Sbjct: 7 MSERSERYLVTSALPYANGPLHVGHMVGAY--LPADIFVRYLRMRGEDVVYVCGTDEHGV 64 Query: 57 KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116 I A+ G + + VD + ++ IS+D+F RT+ H ++ ++K+ + Sbjct: 65 PITLTAEREGKSPREVVDYWYAHMKETFARFSISFDNFSRTSTPLHAQNTQLFYRKLKEG 124 Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEV--------YKGADG-------QYYNAQH------- 154 G I + YS + + D V YK A G +Y A Sbjct: 125 GYISEAESKQMYSPTEGRFLPDRYVEGTCPVCGYKEARGDQCDNCGSWYEAYELIEPHSK 184 Query: 155 ---NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211 PV+ + L + +L + S + P+ +N +IS ++ GL+ ++R Sbjct: 185 ITGGPVEVRTTTHLYLDLPKFAGRLKDWISSQRHWREPV--KNFIISMIEGGLERRPITR 242 Query: 212 KTFDWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAK---FW--PAD--LH 261 WG+ +P+ P + YVW DA Y+++T G + +W P +H Sbjct: 243 D-ISWGVPVPE-PGFEDKRFYVWFDAPIGYVSSTQEWAERTGEPDRWREYWQDPGTRLIH 300 Query: 262 VIGKDILRFHAIYWPAFLLSAN--------LP--LPKKVFSHGFILHKGEK----ISKSL 307 IGKD FH WPA L+ LP +P F + + +GE+ +S S Sbjct: 301 FIGKDNTVFHTTMWPAMLMGVAEDGEEPYILPYDVPANEFMNLEVPVEGERRAVQMSTSR 360 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 + E ++ D LR++L + D + + RVN+DL +GN ++R +S Sbjct: 361 NLAVWLHEALDRFPADPLRFYLASTLPETGDVVFSWREFQSRVNSDLIGNLGNYINRVLS 420 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 + + G + P + + + + M ++ A A++++L +R+ Sbjct: 421 FTERYFGGTLERPSRLPAAAQEAFEDFRALEESYGRKMLDERPREAFAELLALGRRANRF 480 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 FDA PW+ +K +P+RA LY ++ +A +VP+ ++ Sbjct: 481 FDAAAPWKTRKEDPERARADLYACCALLGSIAYHASPYVPEAMERL 526 >gi|115352535|ref|YP_774374.1| methionyl-tRNA synthetase [Burkholderia ambifaria AMMD] gi|122322486|sp|Q0BCT3|SYM_BURCM RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|115282523|gb|ABI88040.1| methionyl-tRNA synthetase [Burkholderia ambifaria AMMD] Length = 720 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 133/516 (25%), Positives = 223/516 (43%), Gaps = 45/516 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K +D+ + D +S+D+F T + ++ + + G I + Sbjct: 77 KEGLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSESIYLALKENGLIAERA 136 Query: 124 YSGWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME----------- 161 Y E + D E K G + + + + P + + Sbjct: 137 IEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPYSVVSGATPV 196 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214 YFFRLS + S+ + E N++ ++ ++ L D +SR Sbjct: 197 RKTSTHYFFRLS--DPRCESFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDAP 254 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268 +G +IP P YVW+DA Y + L + +G W H IGKDIL Sbjct: 255 YFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDREGIDFDAWIRAGSTAEQYHFIGKDIL 314 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327 FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LRY Sbjct: 315 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRY 374 Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ A +D + D + RVN+DL N+ SR+ ++K +DG + + Sbjct: 375 YFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAM 430 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444 + +++ + I + + + RAL + L EV+ Y D KPWEL K N Sbjct: 431 NHPLVAKLRDAIASIAAHYEGREYSRALRHTMELADEVNAYVDGAKPWELAKDPANAVAL 490 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + VA Sbjct: 491 HETCSVSLEAFRLLSLALKPVMPRVAEAVEAFFGVA 526 >gi|298373027|ref|ZP_06983017.1| methionine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058] gi|298275931|gb|EFI17482.1| methionine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058] Length = 684 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 136/509 (26%), Positives = 239/509 (46%), Gaps = 43/509 (8%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I+TA+ Y N HIGH A + AD+ AR+ R G +V+F G+DEHG I A+ GV Sbjct: 8 ITTALPYANGPVHIGHLAGVYVPADIYARYLRNKGEEVVFIGGSDEHGVPITIKARKEGV 67 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + VD+ + + IS+D + RTT K H+ +KK+ DKG+ + + Sbjct: 68 TPQDIVDRYHEIIKRSFEEFGISFDVYSRTTSKTHYRVASYFFKKLYDKGEFIEQTSEQY 127 Query: 128 YSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWMEEEG------------ 164 Y + D +E G + +P + + Sbjct: 128 YDEEAGQFLADRYITGKCPHCGNERAYGDQCESCGTSLSPTDLINPQSAISGSKPVMRQT 187 Query: 165 --YFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 ++ L ++ L Y +H E+ + + S++ GL+ ++SR DWG+ +P Sbjct: 188 RHWYLPLDKHEAWLRDYILNNHKEWKTNV--YGQCKSWLDVGLQPRAVSRD-LDWGVPVP 244 Query: 222 --DDPQYIMYVWIDALTNYLTTTGYL--DNPD--GSKAKFWPAD----LHVIGKDILRFH 271 D ++YVW DA Y++ T L + P+ G+ ++W +H IGKD + FH Sbjct: 245 LPDAEGKVLYVWFDAPIGYISNTIELCSEKPEKFGNWERWWKDPETRLVHFIGKDNIVFH 304 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYF 328 I +PA L + + LP V ++ F+ +G+KIS S + E + ++ D LRY Sbjct: 305 CIVFPAMLKAEGSYILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLVDMPDKQDVLRYV 364 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L KD + + R N++L + GN ++R++ + K +DG +P G + D Sbjct: 365 LTANAPETKDNDFTWRDFQVRNNSELVSIYGNFINRTLVLTGKYFDGKVPPRGTLEDIDS 424 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 +L+ + +I + + N AL + ++L ++Y +PW+L KT+ +R +T+L Sbjct: 425 DVLAQIADSKAKIEQLLDNFHFRDALREAMNLARTGNKYLADTEPWKLAKTDMNRVATIL 484 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V +++ L I + F+P + K+ +L Sbjct: 485 NVALQLSANLNIAFEPFLPFSSAKLRQML 513 >gi|307728927|ref|YP_003906151.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1003] gi|307583462|gb|ADN56860.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1003] Length = 719 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 141/516 (27%), Positives = 225/516 (43%), Gaps = 47/516 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG + A+ Sbjct: 16 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYVGADDTHGTPVMLRAE 75 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K +D+ + + D IS+D++ T + + ++ + + G I Sbjct: 76 MEGLTPKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRVLSENVYLALKEAGLIEARD 135 Query: 124 YSGWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME----- 161 Y E + D E K GA QY ++ NP + Sbjct: 136 IEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYQPTDLVNPYSVVSGATPV 195 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214 YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 196 RKTSTHYFFRLS--DPRCENFLREWVGGLAQPEATNKMREWLGDAGEARLADWDISRDAP 253 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268 +G +IP P YVW+DA Y + L G W H IGKDIL Sbjct: 254 YFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAQKRGLDFDAWVRPGSKAEQYHFIGKDIL 313 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327 FH ++WPA L + P VF+HGF+ G K+SKS G I IE + + LRY Sbjct: 314 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSFIETGLNPEWLRY 373 Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ + +D + D + RVN+DL N+ SR+ ++K +DG + + Sbjct: 374 YFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAM 429 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 +L L +I N + + +RAL Q + L V+ Y D KPW+ K +P A Sbjct: 430 QHPLLVTLRAALGQIAANYEAREYNRALRQTMELADAVNAYVDTAKPWDQAK-DPANAVA 488 Query: 447 V---LYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + V++E R L+I L+ +PKLA + L V Sbjct: 489 LHETCSVSIEAFRLLSIALKPVLPKLAEAVEAFLGV 524 >gi|92114242|ref|YP_574170.1| methionyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043] gi|123084023|sp|Q1QVN7|SYM_CHRSD RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|91797332|gb|ABE59471.1| methionyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043] Length = 681 Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 131/509 (25%), Positives = 218/509 (42%), Gaps = 43/509 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ RF + G + + D HG I A+ Sbjct: 8 KRKILVTSALPYANGSIHLGHLLEYIQTDIWVRFQKSRGHECHYVCADDAHGTAIMLRAE 67 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + + + S + +++D++ T + + ++ + D G I Sbjct: 68 QEGITPEQLISKVSAEHQADFARFGVAFDNYYSTHSEENRQHSERIYTALRDAGHISTRD 127 Query: 124 YSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME----------- 161 Y + D + GA QY A + P + ++ Sbjct: 128 IEQMYDPVKGLFLADRFIKGTCPKCGAGDQYGDNCEACGATYTPAELIDPVSAISGATPE 187 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 +FF+L + D + + + + P + RN+++ + +SG + +SR +G Sbjct: 188 VRSSTHFFFKLPDFADFMQGWIDGG--HVQP-QIRNKLLEWFESGFNEWDISRDAPYFGF 244 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHA 272 +IPD P YVW+DA YL + L +G +W D H IGKDI+ FHA Sbjct: 245 EIPDAPGKYFYVWLDAPIGYLASFQNLCEREGIDFDSYWRRDSDAEVYHFIGKDIVYFHA 304 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L A L P V HGF+ G K+SKS G I E + + LRY+ + Sbjct: 305 LFWPAMLEGAGLRTPTGVNCHGFVTVNGAKMSKSRGTFIKAQTYAEYLNPEYLRYYFAAK 364 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + G D + + RVNADL + N+ SR + K G + A E ++ Sbjct: 365 LTAGVDDLDLNLEDFASRVNADLVGKVVNIASRCAGFVKKLGAGRLAAHCAEPE----LV 420 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL--- 448 + + I + + + RA+ +V+ L E + Y + PW L K R VL Sbjct: 421 TRFVEAGEAIAADYEAREFARAMRKVMDLADEANAYIADKAPWVLAKEE-GREQEVLDIC 479 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V + + R L + LQ VP +A + D L Sbjct: 480 SVGINLFRILMVYLQPVVPAMAEQARDFL 508 >gi|189502608|ref|YP_001958325.1| hypothetical protein Aasi_1277 [Candidatus Amoebophilus asiaticus 5a2] gi|189498049|gb|ACE06596.1| hypothetical protein Aasi_1277 [Candidatus Amoebophilus asiaticus 5a2] Length = 557 Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 136/532 (25%), Positives = 247/532 (46%), Gaps = 48/532 (9%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I+ A+ Y N HIGH A I AD+ AR+ R +V+F +G+DEHG I AQ G+ Sbjct: 12 ITAALPYANGPIHIGHLAGVYIPADIYARYLRSKKKEVIFISGSDEHGVPITIRAQQEGI 71 Query: 68 TTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 T + VD+ N +N +D L IS+D F RT+ + HH T + + +KG + Sbjct: 72 TPQQIVDKYHHLNKQNLQD----LGISFDIFSRTSSEVHHQTASDFFTTLYNKGILIAKE 127 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWMEEEG-------- 164 +Y + D + Y A G + +P + ++ Sbjct: 128 TEQYYDPASHQFLADRYIRGTCPKCGYTDAYGDQCEVCGTTLSPEELIDPRSALSGETPI 187 Query: 165 ------YFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 ++ L Y++ L + E+H ++ + + S+++ GL+ +++R DWG Sbjct: 188 LKATKHWYLPLDKYENWLKHWILETHTDWKSNV--YGQCKSWLEQGLQPRAVTRD-LDWG 244 Query: 218 IKIPDDPQY--IMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPAD----LHVIGKDILRF 270 + +P Y ++YVW DA Y++ T + + + FW +H +GKD + F Sbjct: 245 VPVPLPEAYHKVLYVWFDAPIGYISATKEWAIENNQNWEPFWKDSTTKLVHFVGKDNIVF 304 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRY 327 H I +P L + LP++V ++ F+ G KIS S + + E +E D LRY Sbjct: 305 HCIIFPVMLQAHEGYILPEQVPANEFMNLAGGKISTSRNHAVWLHEYLENFKGQQDVLRY 364 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L KD + + + N +L +GN V+R++ +I K Y G++P + +D Sbjct: 365 VLCVNAPEAKDSDFTWQDFQAKNNNELVATLGNFVNRTLVLIQKYYAGIVPEMTSLIHTD 424 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 ++I+ I ++++ A+ + + L ++Y PW L KT P++ T+ Sbjct: 425 QAIIIQMQEAADSIGQSIEKYRFKEAIQKWMDLARAGNKYLADTAPWHLIKTMPEQVQTI 484 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499 L +++++ +AIL F+P + K+ +L + + + + +KPG +L Sbjct: 485 LNISLQLTAHIAILGAPFLPFTSQKLSQMLLLDNLDWDNAGSMEIIKPGTLL 536 >gi|228923768|ref|ZP_04087046.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835897|gb|EEM81260.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 544 Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 127/513 (24%), Positives = 237/513 (46%), Gaps = 45/513 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K ++ F+ L +YD + T + HH+T + ++ ++ ++G IYK Sbjct: 63 VTAKEIANKYHEEFQRCFHDLGFTYDCYTHTASEHHHETVQNVFLRLLEEGYIYKKTVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 E ++F L +Q+++ E + R N + +VK GL D ++SR G+ Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239 Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271 IP +D + +YVWI+A+T Y + + + G +FW ++ +V GKD + FH Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGKDDQEFWDSEAKTYYVHGKDNIPFH 297 Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ WPA LL P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 298 SVIWPAVLLGIGEGASPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N++L GN V+R++ I K Y G++P E + + Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDKV 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 + + + E ++ AL + V ++YFD ++PW+ ++ +P ++Y Sbjct: 418 ----EGLYKYVGEAIEQTQFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEEMIYN 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V +I A LL+ F+P + ++ + L + N Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506 >gi|325954554|ref|YP_004238214.1| methionyl-tRNA synthetase [Weeksella virosa DSM 16922] gi|323437172|gb|ADX67636.1| Methionyl-tRNA synthetase [Weeksella virosa DSM 16922] Length = 678 Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 139/540 (25%), Positives = 248/540 (45%), Gaps = 45/540 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M + I+ A+ Y N HIGH A + +D+ AR+ R G DV F G+DEHG I Sbjct: 1 MSNTNRYTITAALPYANGPLHIGHMAGVYVPSDIFARYLRRKGKDVAFIGGSDEHGIPIT 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+N GVT + VD+ N ++ + +++D + RTT +H + + +K + Sbjct: 61 IRAKNEGVTPQDIVDKYHENIKNTLESFGVTFDVYSRTTSAKHREVAQDFFKTLYQNSKF 120 Query: 120 YKGCYSGWYSLRDEAYYND----DEVYKGADGQYYNAQ---------------------- 153 + +Y + + D E K + Y Q Sbjct: 121 TEEVTEQYYDEEAKEFLADRYIRGECPKCGNPDAYGDQCEKCGSTLSPEELINPRSALSG 180 Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + P++ E + ++ L YQD L + + +V S++ GLK +++R Sbjct: 181 NTPIK-RETKNWYLPLDQYQDFLKDWILLGHKEDWKSNVYGQVKSWLDDGLKPRAMTRD- 238 Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKD 266 +WGI +P D +MYVW DA Y++ T +G K +W +H IGKD Sbjct: 239 LNWGIPVPIDGTEGKVMYVWFDAPIGYISFTQEWAEKNGKDWKDYWQNPETKLVHFIGKD 298 Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVD 323 + FH I +P+ L + LP V ++ F+ + +KIS S + E +E+ D Sbjct: 299 NIVFHCIVFPSMLKAHGEYILPDNVPANEFLNLEDDKISTSRNWAVWAHEYLEDFPNQQD 358 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 LR+ L + KD + + + N++L +GN ++R + + K YDG+IPT Sbjct: 359 TLRFVLTSNMPENKDNNFTWKDFQTKNNSELVGILGNFINRVMVLTHKYYDGIIPTK--- 415 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 T S + +L + + I E++++ AL + ++L +++ AQ+PW+ K +P+ Sbjct: 416 TSSFDEVLQI-KEYAKRIGEHIEHYEFRAALHEYMNLARLGNQFLQAQEPWK-KANDPEA 473 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN-RCFQSLDQRLKPGFMLHKT 502 ++Y ++ LA L + F+P + K+ D++ V +N + D+ ++ G L +T Sbjct: 474 VKNIMYAANQIAVALAQLAEPFLPFSSTKMLDMMKVELKNWDDLIATDEWIESGHQLGET 533 >gi|29348342|ref|NP_811845.1| methionyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482] gi|253569289|ref|ZP_04846699.1| methionyl-tRNA synthetase [Bacteroides sp. 1_1_6] gi|68566005|sp|Q8A3M1|SYM_BACTN RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|29340246|gb|AAO78039.1| Methionyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482] gi|251841308|gb|EES69389.1| methionyl-tRNA synthetase [Bacteroides sp. 1_1_6] Length = 679 Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 141/517 (27%), Positives = 242/517 (46%), Gaps = 51/517 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GVT + VD+ + + +S+D + RTT K HH+ +K + +KG+ Sbjct: 63 RAKKEGVTPQDVVDRYHYLIKKSFEEFGVSFDVYSRTTSKTHHELASDFFKTLYNKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + ++G Y + + Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210 PV E + ++ L ++ L + E H E+ R N + S++ GL+ ++S Sbjct: 183 KPVM-KETKHWYLPLDKHEGWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236 Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263 R DWGI +P + ++YVW DA Y++ T L PD + W D LH I Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLLHFI 292 Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320 GKD + FH I +PA L + + LP V S+ F+ +G+KIS S + E +E+ Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPG 352 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D LRY L KD + + R N +L GN V+R++ + K +D +P Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDSKVPAC 412 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 T+ D+ L + V E+ + + A + ++L ++Y +PW+L KT+ Sbjct: 413 AELTDYDKETLKEFANVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTD 472 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +R T+L ++++++ LAI + F+P + K+ +L Sbjct: 473 MERVGTILNISLQLVANLAIAFEPFLPFSSEKLRKML 509 >gi|60683709|ref|YP_213853.1| methionyl-tRNA synthetase [Bacteroides fragilis NCTC 9343] gi|81313244|sp|Q5L7I8|SYM_BACFN RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|60495143|emb|CAH09964.1| putative methionyl-tRNA synthetase [Bacteroides fragilis NCTC 9343] Length = 679 Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 138/514 (26%), Positives = 241/514 (46%), Gaps = 45/514 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K ++ +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I Sbjct: 3 KNFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + IS+D + RT+ K HH+ +KK+ +KG+ Sbjct: 63 RAKKEGITPQDVVDRYHFLIKKSFEEFGISFDVYSRTSSKTHHELASDFFKKLYEKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + D + + ++G Y + + Sbjct: 123 EKTSEQYYDEEAHQFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 PV E + ++ L ++ L + E H E+ + + S++ GL+ ++SR Sbjct: 183 KPVM-KETKHWYLPLDKHETWLRQWILEEHKEWRPNV--YGQCKSWLDMGLQPRAVSR-D 238 Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKD 266 DWGI +P + ++YVW DA Y++ T L PD + W D +H IGKD Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLVHFIGKD 295 Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVD 323 + FH I +PA L + + LP V S+ F+ +G+KIS S + E +E+ D Sbjct: 296 NIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPGKQD 355 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 LRY L KD + + R N +L GN V+R++ + K ++G +P G Sbjct: 356 VLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFEGKVPAAGEL 415 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 + D+ L S V E+ + + A + ++L ++Y +PW+L KT+ +R Sbjct: 416 IDYDKETLKEFSDVKAEVEKLLNVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMER 475 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 T+L ++++++ LAI + F+P + ++ +L Sbjct: 476 VGTILNISLQLVANLAIAFEPFLPFSSERLRQML 509 >gi|221199339|ref|ZP_03572383.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2M] gi|221205759|ref|ZP_03578774.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221174597|gb|EEE07029.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221180624|gb|EEE13027.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2M] Length = 719 Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 133/510 (26%), Positives = 224/510 (43%), Gaps = 47/510 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG + A+ Sbjct: 9 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 68 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K +++ + D +S+D+F T + + ++ + D G I + Sbjct: 69 KEGLTPKQLIERVWAEHKRDFDSFGVSFDNFYSTDSEENRQLSEKIYLALKDNGLIAERE 128 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161 Y E + D KG A QY ++ NP + Sbjct: 129 IEQAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATP 187 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 + YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 188 VRKTSKHYFFRLS--DPRCETFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 245 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L + +G W H IGKDI Sbjct: 246 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRNGIDFDAWIRAGSSAEQYHFIGKDI 305 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 306 LYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 365 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + D + RVN+DL N+ SR+ ++K +DG + + Sbjct: 366 YYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SA 421 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +++ + +I + + + RAL + L EV+ Y D KPWEL K N Sbjct: 422 MNHPLVAKLREAIPQIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWELAKDPANAVA 481 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 V++E R L++ L+ +P++A + Sbjct: 482 LHETCSVSLEAFRLLSLALKPVLPRVAEAV 511 >gi|89073403|ref|ZP_01159927.1| methionyl-tRNA synthetase [Photobacterium sp. SKA34] gi|89050890|gb|EAR56364.1| methionyl-tRNA synthetase [Photobacterium sp. SKA34] Length = 681 Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 137/527 (25%), Positives = 231/527 (43%), Gaps = 53/527 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH E + AD+ R+ RL G +V F D HG I AQ Sbjct: 7 KILVTCALPYANGSIHLGHMLEHVQADIWVRYQRLRGNEVHFICADDAHGTPIMLKAQQM 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ + + + S+ + DI + ++ T + + ++ ++ D I S Sbjct: 67 GMEPEQMIAEVSKEHQTDFAGFDIDFSNYHSTHSPENRELASFVYTQLKDNRFITSRTIS 126 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN---------------------PVQ 158 + E + D V KG A+ QY + N PV Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPVM 185 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + +S L E N++ + +SGL+ +SR +G Sbjct: 186 -KDSEHFFFDLPQFESMLKEWTKSG---ALQEETSNKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFH 271 +IP + YVW+DA Y+ + L + D + +FW D H IGKDI+ FH Sbjct: 242 EIPGETGKYFYVWLDAPIGYMGSFKNLCDKRDDLNFDEFWNKDSSTELYHFIGKDIVYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 +++WPA L A P VF HG++ G K+SKS G I ++ + + LRY+ Sbjct: 302 SLFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKASTYLKHLDPECLRYYYAA 361 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 ++ D + + +RVN+D+ N I NL SR+ I K +DG + E Sbjct: 362 KLNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFIAKRFDGKLSDNFVEPELYAEF 421 Query: 391 LSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRAST 446 ++ R+ L E RE RA+ ++ +L + ++Y D + PW + K Sbjct: 422 VAAADRIGELYESRE------YGRAIREITALADKANQYVDEKAPWVVAKQEGKDQELQD 475 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493 + V + + R L L +PKL + L +E +++++Q L Sbjct: 476 ICTVGINLFRVLMAYLIPVMPKLTERSEAFL---NETLTWETIEQPL 519 >gi|94498900|ref|ZP_01305438.1| Methionyl-tRNA synthetase [Oceanobacter sp. RED65] gi|94428532|gb|EAT13504.1| Methionyl-tRNA synthetase [Oceanobacter sp. RED65] Length = 681 Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 148/550 (26%), Positives = 241/550 (43%), Gaps = 65/550 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N H+GH E I D+ RF + G + + D HG I AQ Sbjct: 3 RILVTSALPYANGPIHLGHMLEYIQTDIWVRFQQARGNECHYVCADDAHGTAIMLRAQKM 62 Query: 66 GVT--TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT ++ Q + +D +D + I +D++ T + + + ++ ++ G I Sbjct: 63 GVTPEEQIAAVQEAHE-KDFSDFM-IKFDNYGSTHSEENREISSYIYNQLKANGHIATRG 120 Query: 124 YSGWYSLRDEAYYNDDEVYKG-------AD---------GQYYNAQH--NPVQWM----- 160 + E + D V KG AD G YNA NP M Sbjct: 121 IKQLFDPEKEMFLADRYV-KGECPKCGTADQYGDNCESCGATYNAAELKNPKSVMSGATP 179 Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 E E YFF+L +Q+ L ++ S L E N++ ++ SGL++ +SR +G Sbjct: 180 VEKESEHYFFKLPEFQEFLKTWTRSG---TLQDEVANKLAEWLDSGLQEWDISRDAPYFG 236 Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-AKFWPADL----------HVIGK 265 +IPD P YVW+DA Y+ + L D DG + FW A H IGK Sbjct: 237 FEIPDAPGKYFYVWLDAPIGYMASFKQLCDRTDGLEFDDFWKAGADQGNEATEVYHFIGK 296 Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 DI+ FHA++WP+ L SA P V++HG++ G K+SKS G I ++ + + L Sbjct: 297 DIINFHALFWPSMLHSAGFRTPNAVWAHGYVTVNGAKMSKSRGTFIKARTYLDNLQPEYL 356 Query: 326 RYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 RY+ ++ D + D +RVN+DL + N+ SR + K G Sbjct: 357 RYYYAAKLNNRVDDFDLNLDDFAQRVNSDLIGKVINIASRCAGFVKK-------AGGELC 409 Query: 385 E-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 E D +L I ++ +++ +A+ +++SL + Y ++PW L K Sbjct: 410 ELGDTQLLDHFIDKGNVIAQHYEDREFGKAIREIVSLADTANEYIHEKEPWALAKQEGKE 469 Query: 444 AST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501 + + + + RQ+ L VP +A K+ L + D N D RL+ HK Sbjct: 470 QEVLEICSLGINLFRQIMTYLSPVVPDMAEKVCAFLNIDDLN-----WDSRLQI-LQNHK 523 Query: 502 --TFDPIFPR 509 F P+ R Sbjct: 524 INKFKPLMAR 533 >gi|313611383|gb|EFR86078.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL F2-208] Length = 380 Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 97/241 (40%), Positives = 144/241 (59%), Gaps = 10/241 (4%) Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337 L++ +LPLPK VF HG+IL K K+SKS GNV+DP +I+ G+DALRY+L+RE+ G Sbjct: 2 MLMALDLPLPKMVFGHGWILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGS 61 Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSR 396 DG + + RVN DLAN +GNL++R+V+MI K +DG IP G TE D++++ + Sbjct: 62 DGLFTPEDFVDRVNYDLANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNN 121 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEV 454 V++E +M++ AL Q+ SLVS ++Y D PW L K RA ++V+ E Sbjct: 122 VVKEYEASMEHMQFSVALNQLWSLVSRTNKYIDETAPWALAKEEEKRAELASVMTHLAEN 181 Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ-----RLKPGFMLHKTFDPIFPR 509 +R +A+LLQ F+ + +IF L + +EN + D + G + K PIFPR Sbjct: 182 LRIIAVLLQPFLTRTPGEIFLQLGLQEEN--LKKWDSIYGYGEIPAGTTVVKKGTPIFPR 239 Query: 510 F 510 Sbjct: 240 L 240 >gi|62261489|gb|AAX77993.1| unknown protein [synthetic construct] Length = 709 Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 131/521 (25%), Positives = 239/521 (45%), Gaps = 49/521 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ ++ A+ Y N H+GH I +D+ RF +L G +F G+D HG I Sbjct: 24 MLEMRKILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIML 83 Query: 61 AAQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A++ G+T + V + S R+ +D D +I++D++ T + + ++ K+++K I Sbjct: 84 KAKSLGITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLI 142 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160 K + Y + + D V KG A+ QY A ++P + + Sbjct: 143 SKKAIAQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVIS 201 Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 E +FF L A + + + ES+ +L E N++ + + GL+ +SR Sbjct: 202 GQSPIQKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDA 259 Query: 214 FDWGIKIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW-----PADL-HVIGK 265 +G IP + Q YVW+DA Y+ + Y + + + FW ++L H IGK Sbjct: 260 PYFGFAIPGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGK 319 Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 DI+ FH ++WPA L S P VF++GF+ G+K+SKS G I ++ + L Sbjct: 320 DIIYFHTLFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYL 379 Query: 326 RYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 RY+ + D + + + N+D+ + N+ SR I K +D + + F Sbjct: 380 RYYFASRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF- 437 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442 D + S S+ I + + + A+ +++L + +++ D KPW+L K Sbjct: 438 --DPELESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQ 495 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480 + V + + + L + L+ +P + A + +I F++ Sbjct: 496 KVHQVCSQGINMFKVLIVYLKPIIPSIVAEAERFLNIQFIS 536 >gi|221211555|ref|ZP_03584534.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD1] gi|221168916|gb|EEE01384.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD1] Length = 722 Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 133/510 (26%), Positives = 224/510 (43%), Gaps = 47/510 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K +++ + D +S+D+F T + + ++ + D G I + Sbjct: 77 KEGLTPKQLIERVWAEHKRDFDSFGVSFDNFYSTDSEENRQLSEKIYLALKDNGLIAERE 136 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161 Y E + D KG A QY ++ NP + Sbjct: 137 IEQAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATP 195 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 + YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 196 VRKTSKHYFFRLS--DPRCETFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 253 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L + +G W H IGKDI Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRNGIDFDAWIRAGSSAEQYHFIGKDI 313 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 314 LYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + D + RVN+DL N+ SR+ ++K +DG + + Sbjct: 374 YYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SA 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +++ + +I + + + RAL + L EV+ Y D KPWEL K N Sbjct: 430 MNHPLVAKLREAIPQIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWELAKDPANAVA 489 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 V++E R L++ L+ +P++A + Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAEAV 519 >gi|298385978|ref|ZP_06995535.1| methionine--tRNA ligase [Bacteroides sp. 1_1_14] gi|298261206|gb|EFI04073.1| methionine--tRNA ligase [Bacteroides sp. 1_1_14] Length = 679 Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 141/517 (27%), Positives = 242/517 (46%), Gaps = 51/517 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GVT + VD+ + + +S+D + RTT K HH+ +K + +KG+ Sbjct: 63 RAKKEGVTPQDVVDRYHYLIKKSFEEFGVSFDVYSRTTSKTHHELASDFFKTLYNKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + ++G Y + + Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210 PV E + ++ L ++ L + E H E+ R N + S++ GL+ ++S Sbjct: 183 KPVM-KETKHWYLPLDKHEGWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236 Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263 R DWGI +P + ++YVW DA Y++ T L PD + W D LH I Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLLHFI 292 Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320 GKD + FH I +PA L + + LP V S+ F+ +G+KIS S + E +E+ Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPG 352 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D LRY L KD + + R N +L GN V+R++ + K +D +P Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDSKVPAC 412 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 T+ D+ L + V E+ + + A + ++L ++Y +PW+L KT+ Sbjct: 413 AELTDYDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTD 472 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +R T+L ++++++ LAI + F+P + K+ +L Sbjct: 473 MERVGTILNISLQLVANLAIAFEPFLPFSSEKLRKML 509 >gi|229588700|ref|YP_002870819.1| methionyl-tRNA synthetase [Pseudomonas fluorescens SBW25] gi|259511561|sp|C3KBZ7|SYM_PSEFS RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|229360566|emb|CAY47423.1| methionyl-tRNA synthetase [Pseudomonas fluorescens SBW25] Length = 683 Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 125/516 (24%), Positives = 225/516 (43%), Gaps = 44/516 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D A+ L + +D+F T + + ++ ++ + G I Sbjct: 61 RAEKEGITPEQLIANVQAEHSADFAEFL-VDFDNFHSTHSDENRELSSQIYLRLKEAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWM-------- 160 + ++ + + D + G + QY A + P Sbjct: 120 ATRSITQYFDPEKKMFLADRFIKGTCPKCGTEDQYGDNCEKCGATYAPTDLKNPKSAISG 179 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + + +FF+L +Q L ++ S L N++ ++ +GL+ +SR Sbjct: 180 ATPVLKDSQHFFFKLPDFQQMLQTWTRSG---TLQDAVANKIAEWLDAGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267 +G +IP +P YVW+DA Y+ + L P+ FW D H IGKDI Sbjct: 237 YFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCDRTPELDFDAFWAKDSTAELYHFIGKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L + P + HG++ G+K+SKS G I ++ + + LRY Sbjct: 297 VNFHALFWPAMLEGSGYRKPTGIAVHGYLTVNGQKMSKSRGTFIKARTYLDHLSPEYLRY 356 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 357 YYASKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVAENAAPEL 416 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-- 444 ++ L+ I + + + RA+ +++ L + + + PW L K +A Sbjct: 417 TDAFLAAAP----SIADAYEARDFARAMREIMGLADRANAWIADKAPWSLNKQEGKQAEV 472 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 + V + RQL I L+ +P LA L VA Sbjct: 473 QAICATGVNLFRQLVIFLKPVLPLLAADAEAFLNVA 508 >gi|160884208|ref|ZP_02065211.1| hypothetical protein BACOVA_02185 [Bacteroides ovatus ATCC 8483] gi|298479939|ref|ZP_06998138.1| methionine--tRNA ligase [Bacteroides sp. D22] gi|156110550|gb|EDO12295.1| hypothetical protein BACOVA_02185 [Bacteroides ovatus ATCC 8483] gi|298273748|gb|EFI15310.1| methionine--tRNA ligase [Bacteroides sp. D22] Length = 679 Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 141/517 (27%), Positives = 240/517 (46%), Gaps = 51/517 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + IS+D + RTT HH +K + DKG+ Sbjct: 63 RAKKEGITPQDVVDRYHSLIKKSFEEFGISFDVYSRTTSPTHHQLASDFFKTLYDKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + ++G Y + + Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210 PV E + ++ L ++ L + E H E+ R N + S++ GL+ ++S Sbjct: 183 KPVM-KETKHWYLPLDKHEGWLRKWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236 Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263 R DWGI +P + ++YVW DA Y++ T L PD + W D +H I Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFI 292 Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320 GKD + FH I +PA L + + LP V S+ F+ +G+KIS S + E + + Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPG 352 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D LRY L KD + + R N +L GN V+R++ + K +DG +P Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGRVPAQ 412 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 G T+ D+ L + V E+ + + A + ++L ++Y +PW+L KT+ Sbjct: 413 GELTDYDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTD 472 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +R T+L ++++++ LAI F+P + K+ +L Sbjct: 473 MERVGTILNISLQLVANLAIAFDPFLPFSSEKLRKML 509 >gi|300690748|ref|YP_003751743.1| methionyl-tRNA synthetase (methionine--tRNA ligase) (MetRS) [Ralstonia solanacearum PSI07] gi|299077808|emb|CBJ50446.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) [Ralstonia solanacearum PSI07] Length = 688 Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 146/537 (27%), Positives = 238/537 (44%), Gaps = 58/537 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ER ++ +++A+ Y N HIGH E I D+ RF R+ G + + D HG + Sbjct: 1 MSER-RILVTSALPYANGPIHIGHLVEYIQTDIWVRFQRMRGHETYYVGADDTHGTPVML 59 Query: 61 AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +++ + + RD + L IS+D++ T + D C ++ K+ + G I Sbjct: 60 RAEKEGITPRQLIERVWTEHKRDFDNFL-ISFDNYYSTDSDENRDLCERVYLKLKEAGLI 118 Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM-------- 160 +Y E + D E K GA QY A + P Sbjct: 119 DVREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSG 178 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210 E YFF+LS + ++ + E N++ ++ +S L D +S Sbjct: 179 ATPVRKSSEHYFFKLS--DPRCETFLREWVADLAQPEATNKMREWLGDEGESTLSDWDIS 236 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIG 264 R +G +IP P YVW+DA Y + L G W + H IG Sbjct: 237 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSTHSTAEQYHFIG 296 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 KDIL FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + Sbjct: 297 KDILYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGMNPE 356 Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ ++ A +D + D RVN+DL N+ SRS ++K ++G + Sbjct: 357 WLRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRV----- 411 Query: 383 FTESDESILSVCSRVLQE----IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 +D ++ + L+E I + + + +AL V+ L V+ Y D +KPW+L K Sbjct: 412 ---NDAALANPLMVQLREAAPQIADLYEKREYSKALRAVMDLADAVNAYVDTEKPWDLAK 468 Query: 439 --TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493 D+ V +E R LA+ L+ +P +I L V N ++++D +L Sbjct: 469 DEAQRDKLHAACSVALEAFRLLAVYLKPILPNTVGRIEAFLNVEPLN--WRAIDAQL 523 >gi|237717171|ref|ZP_04547652.1| methionyl-tRNA synthetase [Bacteroides sp. D1] gi|237721837|ref|ZP_04552318.1| methionyl-tRNA synthetase [Bacteroides sp. 2_2_4] gi|262405941|ref|ZP_06082491.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_22] gi|294647899|ref|ZP_06725451.1| methionine--tRNA ligase [Bacteroides ovatus SD CC 2a] gi|294806294|ref|ZP_06765141.1| methionine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b] gi|229443154|gb|EEO48945.1| methionyl-tRNA synthetase [Bacteroides sp. D1] gi|229448706|gb|EEO54497.1| methionyl-tRNA synthetase [Bacteroides sp. 2_2_4] gi|262356816|gb|EEZ05906.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_22] gi|292636807|gb|EFF55273.1| methionine--tRNA ligase [Bacteroides ovatus SD CC 2a] gi|294446550|gb|EFG15170.1| methionine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b] gi|295085632|emb|CBK67155.1| methionyl-tRNA synthetase [Bacteroides xylanisolvens XB1A] Length = 679 Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 141/517 (27%), Positives = 240/517 (46%), Gaps = 51/517 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + IS+D + RTT HH +K + DKG+ Sbjct: 63 RAKKEGITPQDVVDRYHSLIKKSFEEFGISFDVYSRTTSPTHHQLASDFFKTLYDKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + ++G Y + + Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210 PV E + ++ L ++ L + E H E+ R N + S++ GL+ ++S Sbjct: 183 KPVM-KETKHWYLPLDKHEGWLRKWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236 Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263 R DWGI +P + ++YVW DA Y++ T L PD + W D +H I Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFI 292 Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320 GKD + FH I +PA L + + LP V S+ F+ +G+KIS S + E + + Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPG 352 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D LRY L KD + + R N +L GN V+R++ + K +DG +P Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGRVPAQ 412 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 G T+ D+ L + V E+ + + A + ++L ++Y +PW+L KT+ Sbjct: 413 GELTDYDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTD 472 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +R T+L ++++++ LAI F+P + K+ +L Sbjct: 473 MERVGTILNISLQLVANLAIAFDPFLPFSSEKLRKML 509 >gi|300717549|ref|YP_003742352.1| Methionyl-tRNA synthetase [Erwinia billingiae Eb661] gi|299063385|emb|CAX60505.1| Methionyl-tRNA synthetase [Erwinia billingiae Eb661] Length = 668 Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 124/481 (25%), Positives = 210/481 (43%), Gaps = 42/481 (8%) Query: 27 EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADV 86 E I AD+ R+ R+ G V F D HG I AQ G+ + + + S+ + Sbjct: 3 EHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQLGIAPEQMIAEMSQEHQTDFAG 62 Query: 87 LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK--- 143 DISYD++ T + + +++ ++ + G I S Y + D V Sbjct: 63 FDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCP 122 Query: 144 --------GADGQYYNAQHNPVQWM--------------EEEGYFFRLSAYQDKLLSYYE 181 G + + A ++P + + + E YFF L + L ++ Sbjct: 123 KCKSPDQYGDNCEVCGATYSPTELINPQSVVSGATPVMRDSEHYFFDLPEFSAMLQAWTR 182 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241 S L + N++ + +SGL+ +SR +G +IP P YVW+DA Y+ + Sbjct: 183 SGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPGAPGKYFYVWLDAPIGYMGS 239 Query: 242 TGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 L + G FW D H IGKDI+ FH+++WPA L +N P +F HG Sbjct: 240 FKNLCDKRGDIDFDAFWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHG 299 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNAD 353 ++ G K+SKS G I ++ + D+LRY+ +++ D + + +RVNAD Sbjct: 300 YVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAAKLSSRIDDIDLNLEDFVQRVNAD 359 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 + N + NL SR+ I K +DG + A D + + I E ++ RA Sbjct: 360 IVNKVVNLASRNAGFINKRFDGKLSAELA----DPELYKTFTDASASIGEAWNSREFGRA 415 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471 + ++++L +RY D Q PW + K A + + + + R L L+ +P L Sbjct: 416 VREIMALADVANRYVDEQAPWVVAKQEGRDADLQAICSMGINMFRVLMTWLKPVLPSLTE 475 Query: 472 K 472 + Sbjct: 476 R 476 >gi|90022043|ref|YP_527870.1| methionyl-tRNA synthetase [Saccharophagus degradans 2-40] gi|123276670|sp|Q21I21|SYM_SACD2 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|89951643|gb|ABD81658.1| methionyl-tRNA synthetase [Saccharophagus degradans 2-40] Length = 677 Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 123/508 (24%), Positives = 227/508 (44%), Gaps = 50/508 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + ++ +++A+ Y N H+GH E I D+ RF ++ G D + D HG I Sbjct: 1 MTNKRQILVTSALPYANGAIHLGHMVETIQTDIWVRFQKMQGHDCTYVCADDAHGTAIML 60 Query: 61 AAQNAGVTT-----KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD 115 A+ GVT KV D + +F+D I +D++ T + + ++++++ Sbjct: 61 RAEQLGVTAEEQIAKVKADHEA-DFKDFL----IGFDNYHSTHSEENKALSHLIYERVKA 115 Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWMEEEG 164 G I + + + + D + GA+ QY +A ++P++ Sbjct: 116 NGHIAERSITQAFDPEKNLFLADRYIKGTCPKCGAEDQYGDNCENCSATYSPMELKNPRS 175 Query: 165 YFFRLSAYQDKLLSYYESHPEFI-----------LPIERRNEVISFVKSGLKDLSLSRKT 213 + + + Y+ + PEF L E N++ ++ +GL++ +SR Sbjct: 176 VISGATPVAKESVHYFFTLPEFTGYLKEWTRAGHLQDEVANKLAEWLDAGLQEWDISRDA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDI 267 +G +IP P YVW+DA Y+ + L + G ++W AD H IGKDI Sbjct: 236 PYFGFEIPGAPGKYFYVWLDAPIGYMASFKQLCDRTGKDFDEYWKADSNCELYHFIGKDI 295 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L A P KV HGF+ G+K+SKS G I+ ++ + + LRY Sbjct: 296 VNFHALFWPALLSDAGFRTPTKVCVHGFLTVDGKKMSKSRGTFINARTYLDHLQPEYLRY 355 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ D + + +RVN+DL + N+ SR+ + K GA + + Sbjct: 356 YYAAKLTGSVDDIDLNLEDFVQRVNSDLVGKVVNIASRTAKFVQK-------AGGALSAN 408 Query: 387 --DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442 +E + + I + +N+ +A+ ++++L + + Q PW L K N Sbjct: 409 IINEELWQSFVKAGDVIAAHYENRDYSKAMREIMALADLANEFIAEQAPWALAKQEGNEQ 468 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLA 470 + V + + R + L+ +P+ A Sbjct: 469 KVLDVCSLGINCFRAIMTYLKPVLPQTA 496 >gi|282879053|ref|ZP_06287813.1| methionine--tRNA ligase [Prevotella buccalis ATCC 35310] gi|281298787|gb|EFA91196.1| methionine--tRNA ligase [Prevotella buccalis ATCC 35310] Length = 687 Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 137/516 (26%), Positives = 244/516 (47%), Gaps = 51/516 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K ++ ++ A+ Y N HIGH A + AD+ R+ RL DV+F G+DEHG I Sbjct: 4 KNFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPITI 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GVT + VD+ + + IS+D + RTT + HH +KK+ ++ + Sbjct: 64 RARKEGVTPQDVVDRYHSLIKKSFEEFGISFDIYSRTTSEIHHKLASDFFKKLYEEEKLL 123 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWM--------- 160 + +Y + D + ++GA G ++ + +P++ + Sbjct: 124 EQETEQYYDEEAHQFLADRYITGECPHCHHEGAYGDQCEHCGSDLSPMELINPKSAVSGS 183 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213 + + ++ L+ YQ L + E H E+ R+ V KS L DL L + Sbjct: 184 KPVIKKTKNWYLPLNDYQTWLKKWILEGHQEW------RSNVYGQCKSWL-DLDLQPRAM 236 Query: 214 ---FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYL--DNPD--GSKAKFWPAD----L 260 DWGI +P + ++YVW DA Y++ T L NP+ GS K+W + Sbjct: 237 TRDLDWGIPVPIEGAEGKVLYVWFDAPIGYISNTKELCESNPERWGSWEKWWKDQDTRLV 296 Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 H IGKD + FH + +P L + + LP V ++ F+ + +KIS + + E +++ Sbjct: 297 HFIGKDNIVFHCLIFPTMLKAHGDYILPDNVPANEFLNLEDDKISTTRNWAVWLHEYLKD 356 Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 + D LRY L KD + ++R N++L GN V+R++ + K +DG++ Sbjct: 357 LPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYFDGVV 416 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G + D+ L V ++ + A + ++L ++Y +PW++ Sbjct: 417 PPCGELLDVDKQALDEFKDVKNKVEGYLDAFKFREAQKEAMNLARIGNKYMTECEPWKVW 476 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 KT+P+R TVLY++++++ LAI + F+P + K+ Sbjct: 477 KTDPERVKTVLYISLQLVANLAIAFEPFLPFSSEKL 512 >gi|330429369|gb|AEC20703.1| methionyl-tRNA synthetase [Pusillimonas sp. T7-7] Length = 690 Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 144/562 (25%), Positives = 251/562 (44%), Gaps = 75/562 (13%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++++TA+ Y N HIGH E I AD+ R R+ G V F D HG I A++ G Sbjct: 5 IFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMSGHTVHFVGADDAHGAPIMLKAESEG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--------- 117 +T + V + + + I +D + T + + + +++++ G Sbjct: 65 ITPQALVARYAAERPQYLNGFHIKFDHWHSTDSAENIELSQDIYRRLKAAGFIDTRTIEQ 124 Query: 118 --DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------------E 161 D KG + ++ E + G + A + P + + Sbjct: 125 FYDPVKGMFLPDRYIKGECPRCHAKDQYGDSCESCGAVYAPTELINPYSTLTKATPVLKS 184 Query: 162 EEGYFFRLSAYQD-KLLSYYESHPEFILPIERRNEVISFVK-----------SGLKDLSL 209 E +FF+LS + + L + + ++EV++ + + L D + Sbjct: 185 SEHFFFKLSDPRCVEFLQAWTTGSNASGNKRLQSEVLAKTREWLGTGSDDGEANLADWDI 244 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-----------LDNPDGSKAKFWPA 258 SR +GI IPD P YVW+DA YL + L PD + + Sbjct: 245 SRDEPYFGIPIPDAPGKYFYVWLDAPVGYLASLKAYCAKQGLSFDDLIAPDSNTEQ---- 300 Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 +H IGKDI+ FHA++WPA L + P + HGFI GEK+SKS G I P+ + Sbjct: 301 -VHFIGKDIVYFHALFWPAMLKFSGKKTPDGLHVHGFITVSGEKMSKSRGTGISPLRYL- 358 Query: 319 EVGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 ++G++A +RY++ ++ A +D ++ D RVN+DL N+ SR+ + I K +DG Sbjct: 359 DIGMNAEWMRYYIAAKLNAHVEDLDFNPDDFIARVNSDLIGKYVNIASRAANFISKHFDG 418 Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 + T ++ +L +V +++R + +N+ RA+ QV++ +++ FDA +PW Sbjct: 419 QLGYQADTTALEQELL----QVTEQVRSSFENREYGRAVRQVMAQADLINQAFDAAQPWV 474 Query: 436 LKK---TNPDRASTVLY----VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ- 487 L K + D +L + + L+++L +P L K+ LF D+ FQ Sbjct: 475 LAKGIGSASDEQKALLQDICSRALAGFKALSVMLTPVLPVLTEKVARELF--DQGALFQW 532 Query: 488 ----SLDQRLKPGFMLHKTFDP 505 L QR+ P L + +P Sbjct: 533 ADAAKLPQRIAPFKHLMQRVEP 554 >gi|163942754|ref|YP_001647638.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|229558040|sp|A9VP41|SYM_BACWK RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|163864951|gb|ABY46010.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] Length = 544 Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 127/508 (25%), Positives = 231/508 (45%), Gaps = 47/508 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G VL+ +G+D +G I A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEHVLYVSGSDCNGTPITIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K D+ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTVKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218 E ++F L +Q ++ E + R+ I ++K GL+D ++SR G+ Sbjct: 183 EHFYFALHKFQQQIKEAVEIAKQ---KGTWRDNAIQLTERYLKEGLQDRAVSRD-LPIGV 238 Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRF 270 IP +D + +YVWI+A+T Y + + + G +FW + +V GKD + F Sbjct: 239 PIPVAGYEDKK--IYVWIEAVTGYYSASKHWVEETGKDDQEFWDKEAKTYYVHGKDNIPF 296 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 H+I WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 297 HSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFL 356 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +D + N++L GN V+R++ I K Y G +P E + Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGTVPKGSIDVELKDK 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 + + + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 417 V----EGLYKSVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIY 472 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477 V +I A LL+ F+P + ++ + L Sbjct: 473 NCVYLIANFAQLLEPFLPFSSERVRNTL 500 >gi|323525136|ref|YP_004227289.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1001] gi|323382138|gb|ADX54229.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1001] Length = 718 Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 134/509 (26%), Positives = 221/509 (43%), Gaps = 45/509 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG + A+ Sbjct: 16 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYVGADDTHGTPVMLRAE 75 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT K +D+ + + D IS+D++ T + + ++ + + G I Sbjct: 76 KEGVTPKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRVLSENVYLALKEAGLIEARD 135 Query: 124 YSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWME----------- 161 Y E + D E K GA QY + + P + + Sbjct: 136 IEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYQPTELVNPYSVVSGATPV 195 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214 YFFRLS + ++ + + E N++ ++ ++ L D +SR Sbjct: 196 RKTSTHYFFRLS--DPRCENFLRAWVGGLAQPEATNKMREWLGDAGEAKLADWDISRDAP 253 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268 +G +IP P YVW+DA Y + L G W H IGKDIL Sbjct: 254 YFGFEIPGAPGKYFYVWLDAPVGYYASFRNLAQKRGLDFDAWVRKGSTAEQYHFIGKDIL 313 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327 FH ++WPA L + P VF+HGF+ G K+SKS G I VI+ + + LRY Sbjct: 314 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIDTGLNPEWLRY 373 Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ + +D + D + RVN+DL N+ SR+ ++K ++G + + Sbjct: 374 YFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFEGRVQD----SAM 429 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444 +L+ + I N + + +RAL + L V+ Y D KPW+ K N Sbjct: 430 QHPLLATLRAAIPHIAGNYEAREYNRALRHTMELADAVNAYVDTAKPWDQAKDPANAVAL 489 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKI 473 V++E R L++ L+ +PKLA + Sbjct: 490 HETCSVSIEAFRLLSVALKPVLPKLAESV 518 >gi|83746715|ref|ZP_00943764.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA [Ralstonia solanacearum UW551] gi|83726668|gb|EAP73797.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA [Ralstonia solanacearum UW551] Length = 712 Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 141/533 (26%), Positives = 234/533 (43%), Gaps = 50/533 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ER ++ +++A+ Y N HIGH E I D+ RF R+ G ++ + D HG + Sbjct: 25 MSER-RILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHEIYYVGADDTHGTPVML 83 Query: 61 AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +++ + + RD + L +S+D++ T + + C ++ K+ + G I Sbjct: 84 RAEKEGITPRQLIERVWTEHKRDFDNFL-VSFDNYYSTDSDENRELCERVYLKLKEAGLI 142 Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM-------- 160 +Y E + D E K GA QY A + P Sbjct: 143 DVREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSG 202 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210 E YFF+LS + ++ + E N++ ++ +S L D +S Sbjct: 203 ATPVRKSSEHYFFKLS--DPRCETFLREWVADLAQPEATNKMREWLGDEGESTLSDWDIS 260 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIG 264 R +G +IP P YVW+DA Y + L G W + H IG Sbjct: 261 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSTHSTAEQYHFIG 320 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 KDIL FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + Sbjct: 321 KDILYFHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPE 380 Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ ++ A +D + D RVN+DL N+ SRS ++K ++G + Sbjct: 381 WLRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVNDAAL 440 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TN 440 ++ +I + + + +AL V+ L V+ Y D +KPW+L K Sbjct: 441 ----GNPLMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAYVDTEKPWDLAKDEAQ 496 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493 D+ V +E R LA+ L+ +P +I L V N ++++D +L Sbjct: 497 RDKLHAACSVALEAFRLLAVYLKPILPSTVARIEAFLNVEPLN--WRAIDAQL 547 >gi|254786923|ref|YP_003074352.1| methionyl-tRNA synthetase [Teredinibacter turnerae T7901] gi|237684917|gb|ACR12181.1| methionine--tRNA ligase [Teredinibacter turnerae T7901] Length = 678 Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 139/551 (25%), Positives = 240/551 (43%), Gaps = 68/551 (12%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ RF +L G ++ D HG I A+ Sbjct: 11 KILVTSALPYANGAIHLGHMVETIQTDIWVRFQKLRGNQCIYVCADDAHGTAIMLRAEQL 70 Query: 66 GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GVT + + S + + D AD L I +D++ T + + + ++ ++ + G I Sbjct: 71 GVTPEEQIAAVSADHQADFADFL-IDFDNYHSTHSEENRELSSHIYTQLQNNGHIATRSV 129 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 + Y + + D V G + + +A ++P++ + Sbjct: 130 TQAYDPEKQLFLADRYVKGTCPKCKTPDQYGDNCENCSATYSPMELLNPVSVISGATPIA 189 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + + YFF L + D L + + L E N++ ++ SGL++ +SR +G + Sbjct: 190 KDSDHYFFTLPEFSDFLKDWTRAGH---LQDEVANKLAEWLDSGLQEWDISRDAPYFGFE 246 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-AKFWPAD-----LHVIGKDILRFHA 272 IP P YVW+DA Y+ + L D +G + +W D H IGKDI+ FHA Sbjct: 247 IPGHPGKYFYVWLDAPIGYMASFKNLCDKTEGLEFDDYWKKDSDCELYHFIGKDIINFHA 306 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L A P KV HGF+ G K+SKS G I+ ++ + + LRY+ + Sbjct: 307 LFWPAMLSDAGFRTPTKVCVHGFLTVDGTKMSKSRGTFINARTYLKHLDPEYLRYYYASK 366 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPG---AFTE 385 + D + + RVN+DL + N+ SR+ + K ++ P FT Sbjct: 367 LTNSVDDLDLNLEDFISRVNSDLVGKVVNIASRTAKFVAKSGGTLSAVVAEPALWEKFTA 426 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443 +++SI S + +N+ +A+ ++++L + Y Q PW+L K + Sbjct: 427 AEQSIAS-----------HYENREYGKAMREIMALADAANEYIAEQAPWQLAKEAGKEQQ 475 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH--- 500 V + V L L+ +P A K + L +LD FM Sbjct: 476 VLEVCSMGVNCFAALMTFLKPVLPATALKAEEFLNT--------TLDWSDSLTFMSEHTI 527 Query: 501 KTFDPIFPRFL 511 +TF P+ R L Sbjct: 528 QTFKPLMTRVL 538 >gi|260577804|ref|ZP_05845738.1| methionine--tRNA ligase [Corynebacterium jeikeium ATCC 43734] gi|258604031|gb|EEW17274.1| methionine--tRNA ligase [Corynebacterium jeikeium ATCC 43734] Length = 574 Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 138/497 (27%), Positives = 231/497 (46%), Gaps = 68/497 (13%) Query: 40 LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99 + G +VL +GTDEHG + A+ G T + D+ +R + L +SYD F RTT Sbjct: 1 MAGNEVLMVSGTDEHGTPLLVQAEKEGTTVQELADRYNRIIVEDLASLGLSYDLFTRTTT 60 Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQ 148 + H+ + L+ + + G + G S D + +G Sbjct: 61 RNHYAVVQELFTGLYNNGYMVTQTTRGAISSSTGRTLPDRYIEGTCPICGANDARGDQCD 120 Query: 149 YYNAQHNP--------------VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194 Q +P ++++ E + L A + L ++ + ++ R Sbjct: 121 NCGNQLDPEDLIDPRSKINGETPEFIDTEHFMLDLPALAEALTTWLKGRTDW------RP 174 Query: 195 EVISFVKSGLKDL---SLSRKTFDWGIKIP-----DDPQYIMYVWIDALTNYLTTT---- 242 V+ F + L+D+ ++SR DWG+ IP D+ +YVW DA+ YL+ + Sbjct: 175 NVLKFSLNLLEDIRPRAMSRD-IDWGVPIPVEGWQDNNAKKLYVWFDAVVGYLSASIEWA 233 Query: 243 GYLDNPDGSKAKFW--PADL--HVIGKDILRFHAIYWPAFLLSAN--------------- 283 + +PD + K+W P L + +GKD + FH+ WPA LL Sbjct: 234 WRIGDPDAWR-KWWNDPEALSYYFMGKDNITFHSQIWPAELLGYGGQGSKGGEAGDLADP 292 Query: 284 -LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 L LP +V S F+ G K S S G VI + ++E G DALRYF+ D + Sbjct: 293 ALNLPTEVVSSEFLTMSGSKFSSSKGVVIYVRDFLKEFGPDALRYFIATAGPETTDTDFT 352 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402 D +R+N++LAN GNLV+R+VSM K++ G +PTPG T DE++L+ ++ + + Sbjct: 353 WDEFVRRINSELANEWGNLVNRTVSMAHKNF-GEVPTPGPLTAEDEALLAESAKAFEVVG 411 Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAI 460 +N+ + + + + ++Y A +PW+L K +R +TVLY ++V+ + Sbjct: 412 DNINLSRFKAGITEAMRIAGRANQYIAAMEPWKLAKDEDQRERLATVLYTALQVVSDVNT 471 Query: 461 LLQAFVPKLANKIFDIL 477 LL ++P A KIF+ L Sbjct: 472 LLTPYLPFSAQKIFETL 488 >gi|256822909|ref|YP_003146872.1| methionyl-tRNA synthetase [Kangiella koreensis DSM 16069] gi|256796448|gb|ACV27104.1| methionyl-tRNA synthetase [Kangiella koreensis DSM 16069] Length = 674 Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 127/513 (24%), Positives = 234/513 (45%), Gaps = 44/513 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + K+ +++A+ Y N HIGH E + D+ RF + G ++ D HG + Sbjct: 1 MSSQRKILVTSALPYANGDIHIGHLLEYVQTDIWVRFQKSRGHQCIYVCADDTHGTPVML 60 Query: 61 AAQNAGVTTKVFVDQNSR-NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AQ G T + F+ ++ + + +D AD L I +D+F T + + ++ K+ + G I Sbjct: 61 RAQKEGKTPEDFIKESHQAHEQDFADCL-IGFDNFHSTHSPESKELTQGIYLKLKENGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWM-------- 160 + + E + D V G++ QY A ++P + Sbjct: 120 SSKTINQLFDPEKEMFLPDRFVKGTCPKCGSEDQYGDNCDACGATYSPTELKNPKSAVSG 179 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E E +FF L ++ L + + + E +N++ ++ L+ +SR Sbjct: 180 ATPILKESEHFFFDLKGFEGFLREWLGADGH--VQSEVQNKMNEWLDD-LRQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDI 267 +G +IP + YVW+DA Y+ + L + D + +FW D H IGKDI Sbjct: 237 YFGWEIPGEKGKYFYVWLDAPIGYMASFKNLCDKRDDLNFDEFWGKDSDAEVYHFIGKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FH ++WP+ L A P V++HGF+ G+K+SKS G I + + LRY Sbjct: 297 IYFHTLFWPSVLDGAGYRTPSAVWAHGFVTVNGQKMSKSKGTFIKARTYLNHFRPEFLRY 356 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + +++ D F + + +RVN+DL + N+ SR I K +D + + Sbjct: 357 YYAAKLSNRIDDFDLNLEDFVQRVNSDLVGKLVNIASRCAGFITKQFDSNLSD----SII 412 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRA 444 + ++ + E+ ++ +N+ RA+ +++L + + Y ++PW L K + +RA Sbjct: 413 EPELIKQFTEASDELAQHYENRDFGRAVKHIMALADKANAYIANEEPWNLVKNDETKERA 472 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V + + + + L L +P+LA K+ D L Sbjct: 473 HQVCSLGINMFKILTAYLAPVLPELAGKVQDFL 505 >gi|229007362|ref|ZP_04164960.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4] gi|228753893|gb|EEM03333.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4] Length = 545 Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 132/528 (25%), Positives = 238/528 (45%), Gaps = 56/528 (10%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ GV Sbjct: 5 FIGGAWPYANGSLHLGHVAGLLPGDILARYYRTKGENVLYVSGSDCNGTPIAIRAKQEGV 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K D F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 65 TAKEIADYYHEEFERCFKELGFTYDCYTRTDAQHHHETVQKIFLRLLEEGFIYKKTVEQA 124 Query: 128 YSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE--------------E 163 Y + D E +G +A +P+ +E+ E Sbjct: 125 YCETCTQFLPDRYVEGVCPHCHEPARGDQCDACSAILDPLDLLEKKCKLCGNTPAVKETE 184 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIER----RNEVIS----FVKSGLKDLSLSRKTFD 215 ++F L +Q ++ + + +R R+ I +++ GL+D ++SR Sbjct: 185 HFYFALHKFQPQI-------KDAVAVAKREGAWRDNAIQLTERYLEEGLQDRAVSRD-LP 236 Query: 216 WGIKIP----DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPADL---HVIGKDI 267 G+ IP +D + +YVWI+A+ Y + + + + +FW + +V GKD Sbjct: 237 IGVPIPVKGYEDKK--IYVWIEAVAGYYSASKRWAEETRQDDGEFWSSSARTYYVHGKDN 294 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 + FH+I WPA LL +P+ + S+ ++ + K+S S + +++E D++R Sbjct: 295 IPFHSIIWPAVLLGIGEKAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIR 354 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 YFL +D + N++L GN V+R++ I K YDG +P E Sbjct: 355 YFLTINAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGAVPKGHINLEL 414 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 E I + V I ++ A+ + V ++YFD Q PW+ ++ P Sbjct: 415 KERIEELYRSVGNAIEQDH----FKVAVETIFETVRFANKYFDEQAPWKQREEEPVACEE 470 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN-RCFQSLDQRL 493 +Y V I A LL+ F+P + ++ ++L + + +C L +R+ Sbjct: 471 TIYTCVYFIVNFAQLLEPFLPFSSERVRNMLAITNTGWKCENILPERI 518 >gi|254373902|ref|ZP_04989384.1| hypothetical protein FTDG_00056 [Francisella novicida GA99-3548] gi|151571622|gb|EDN37276.1| hypothetical protein FTDG_00056 [Francisella novicida GA99-3548] Length = 686 Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 130/516 (25%), Positives = 238/516 (46%), Gaps = 49/516 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I +D+ RF +L G +F G+D HG I A++ Sbjct: 15 KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSL 74 Query: 66 GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + V + S R+ +D D +I++D++ T + + ++ K+++K I K Sbjct: 75 GITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 133 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161 + Y + + D V KG A+ QY A ++P + + Sbjct: 134 AQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI 192 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L A + + + ES+ +L E N++ + + GL+ +SR +G Sbjct: 193 QKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGF 250 Query: 219 KIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW-----PADL-HVIGKDILRF 270 IP + Q YVW+DA Y+ + Y + + + FW ++L H IGKDI+ F Sbjct: 251 AIPGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYF 310 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 HA++WPA L S P VF++GF+ G+K+SKS G I ++ + LRY+ Sbjct: 311 HALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFA 370 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 + D + + + N+D+ + N+ SR I K +D + + F D+ Sbjct: 371 SRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF---DQE 426 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447 + S S+ I + + + A+ +++L + +++ D KPW+L K + V Sbjct: 427 LESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQV 486 Query: 448 LYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480 + + + L L+ +P + A + +I F++ Sbjct: 487 CSQGINMFKVLIAYLKPIIPSIVAEAERFLNIQFIS 522 >gi|294507570|ref|YP_003571628.1| methionyl-tRNA synthetase [Salinibacter ruber M8] gi|294343898|emb|CBH24676.1| methionyl-tRNA synthetase [Salinibacter ruber M8] Length = 712 Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 131/521 (25%), Positives = 234/521 (44%), Gaps = 59/521 (11%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E+L ++ A+ Y N HIGH A + AD+ R+ RL G DV F G+DE G I A Sbjct: 8 ERLLVTAALPYANGPIHIGHLAGAYLPADLFVRYQRLKGEDVAFICGSDEMGVAILMRAI 67 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 T + +D RD + +S+D + RT+ + H +T + ++ + + G Sbjct: 68 REDRTPEDIIDTYHPQIRDNFERFGMSFDYYGRTSSETHTETTQDFFRVLDENGGFDLKT 127 Query: 124 YSGWYSLRDEAYYND-----------------DEVYKGADGQYYNAQHNP--------VQ 158 Y E + D D+ + NP + Sbjct: 128 DEQLYDPEAEMFLADRFVIGTCPVCGFEEAYGDQCEQCGSSLSPTELQNPQSTLTDATPE 187 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLSRKTF 214 + E ++ L Q +L + SHPE+ +N V+ ++S GLK +++R Sbjct: 188 FKETTHWYLPLGELQPQLEEWIGSHPEW------KNNVVGQIQSWFDEGLKGRAITRDV- 240 Query: 215 DWGIKIPDD---------PQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD--- 259 WG+ +PDD ++YVW DA Y++ T G A +W + Sbjct: 241 PWGVPVPDDVAERHGLEAEGKVIYVWFDAPIGYISATKEWAAEQGEPDAWADYWQDEDTR 300 Query: 260 -LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 +H IGKD + FH + +P+ L+ + LP V ++ F+ +GEK+S S G + E + Sbjct: 301 LVHFIGKDNIVFHCLMFPSMLMEHGDYVLPDNVPANEFLNLEGEKLSTSRGWAVWLHEYL 360 Query: 318 EEVG-----VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 ++ D LRY L + KD + +G ++RVN +LAN GN V R+++ + Sbjct: 361 DDFADERHAPDLLRYALATTLPETKDADFSWEGFQQRVNGELANVFGNFVHRTLTFAQRY 420 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 +DG +P +E+D ++L + V + + A+ + ++L ++YF+ + Sbjct: 421 FDGTVPPLEDPSEADRAMLDRMAEVPDTVGAAYEEHRTRDAVFETMALARRGNKYFNDTE 480 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 PW +++P + ++V+++V L+IL + +P A + Sbjct: 481 PWHTHESDPQACANTIHVSLQVCAALSILFEPVLPSAAATL 521 >gi|161524036|ref|YP_001579048.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189351203|ref|YP_001946831.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|226710899|sp|A9AHJ8|SYM_BURM1 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|160341465|gb|ABX14551.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189335225|dbj|BAG44295.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] Length = 722 Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 133/510 (26%), Positives = 223/510 (43%), Gaps = 47/510 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K +++ + D +S+D+F T + + ++ + D G I + Sbjct: 77 KEGLTPKQLIERVWAEHKRDFDSFGVSFDNFYSTDSEENRQLSEKIYLALKDNGLIAERE 136 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161 Y E + D KG A QY ++ NP + Sbjct: 137 IEQAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATP 195 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 + YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 196 VRKTSKHYFFRLS--DPRCETFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 253 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L + G W H IGKDI Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRKGIDFDAWIRAGSSAEQYHFIGKDI 313 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 314 LYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + D + RVN+DL N+ SR+ ++K +DG + + Sbjct: 374 YYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SA 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +++ + +I + + + RAL + L EV+ Y D KPWEL K N Sbjct: 430 MNHPLVAKLREAIPQIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWELAKDPANAVA 489 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 V++E R L++ L+ +P++A + Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAEAV 519 >gi|18311505|ref|NP_563439.1| methionyl-tRNA synthetase [Clostridium perfringens str. 13] gi|18146189|dbj|BAB82229.1| probable methionine-tRNA ligase [Clostridium perfringens str. 13] Length = 514 Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 127/495 (25%), Positives = 229/495 (46%), Gaps = 29/495 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ I A Y N HIG + D+LAR+HR G +V+F +G+D HG I A+ Sbjct: 2 KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + + +++ R F + L S++ F RT + H + + K + +KG IY+ Sbjct: 62 NKSPEELINKYHREFVRCFNKLGFSFNIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD---KLLSYYES 182 +Y + ++ + +G N ++ V+ FF+LS +QD +L ES Sbjct: 122 EFYCPKCCDTLDEFGIKEGL----CNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQYIMYVWIDALTNY 238 E + I +R +++ GL+D L+R+ +WGI++P +D + +YVWIDAL Y Sbjct: 178 WRENAIKITKR-----YLEGGLRDKILTRE-INWGIEVPIEGFEDKR--VYVWIDALLAY 229 Query: 239 LTTTGYLDNPDG-SKAKFWPADLHVI----GKDILRFHAIYWPAFLLSANLPLPK-KVFS 292 +T + + G S ++W + I GK+ + FH +PA L L + ++FS Sbjct: 230 VTASKKVIEEKGQSLEEYWNNEDSRIYLVHGKENIPFHTTMFPAILSGIGLEKSEIRIFS 289 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 ++ +G+ S + I ++E +D++RY+L+ A K+ + N Sbjct: 290 SQYLTLEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNN 349 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 +L IGN +R ++ I K++ G I E ++ R + +N Sbjct: 350 ELVGEIGNFTNRVLTFIKKNFSGEIKGE----ELPLQWKNLIRRTYASVGNKFENGEFKS 405 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + ++ +L+ + + +FD KPW L N + VLY+ +++ L L+ +P K Sbjct: 406 GVKEMFNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICSQILVALTDLMNPIIPFTCEK 465 Query: 473 IFDILFVADENRCFQ 487 I L + D F+ Sbjct: 466 IKMFLGIKDTKWSFK 480 >gi|228993761|ref|ZP_04153666.1| Methionyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442] gi|228765972|gb|EEM14621.1| Methionyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442] Length = 543 Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 131/528 (24%), Positives = 237/528 (44%), Gaps = 56/528 (10%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ GV Sbjct: 5 FIGGAWPYANGSLHLGHVAGLLPGDILARYYRTKGENVLYVSGSDCNGTPIAIRAKQEGV 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K D F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 65 TAKEIADYYHEEFERCFKELGFTYDCYTRTDAQHHHETVQKIFLRLLEEGFIYKKTVEQA 124 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHN----------PVQWMEE--------------E 163 Y + D V G + A+ + P+ +E+ E Sbjct: 125 YCETCTQFLPDRYVEGGCPHCHEPARGDQCDACSAILDPLDLLEKKCKLCGNTPAVKETE 184 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIER----RNEVIS----FVKSGLKDLSLSRKTFD 215 ++F L +Q ++ + + +R R+ I +++ GL+D ++SR Sbjct: 185 HFYFALHKFQPQI-------KDAVAVAKREGAWRDNAIQLTERYLEEGLQDRAVSRD-LP 236 Query: 216 WGIKIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADL---HVIGKDI 267 G+ IP +D + +YVWI+A+ Y + + G +FW + +V GKD Sbjct: 237 IGVPIPVKGYEDKK--IYVWIEAVAGYYSASKRWAEEMGEDDGEFWSSSAKTYYVHGKDN 294 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 + FH+I WPA LL +P+ + S+ ++ + K+S S + +++E D++R Sbjct: 295 IPFHSIIWPAVLLGIGEKAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIR 354 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 YFL +D + N++L GN V+R++ I K YDG +P E Sbjct: 355 YFLTINAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGAVPKGHINLEL 414 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 E I + + + ++ A+ + V ++YFD Q PW+ ++ P Sbjct: 415 KERI----EELYRSVGNAIEQAHFKVAVETIFETVRFANKYFDEQAPWKQREEEPVACEE 470 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN-RCFQSLDQRL 493 +Y V I A LL+ F+P + ++ ++L + + +C L +R+ Sbjct: 471 TIYTCVYFIVNFAQLLEPFLPFSSERVRNMLAITNTGWKCENILPERI 518 >gi|198274029|ref|ZP_03206561.1| hypothetical protein BACPLE_00166 [Bacteroides plebeius DSM 17135] gi|198273107|gb|EDY97376.1| hypothetical protein BACPLE_00166 [Bacteroides plebeius DSM 17135] Length = 680 Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 139/512 (27%), Positives = 239/512 (46%), Gaps = 41/512 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K ++ +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I Sbjct: 3 KNFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GVT + VD+ +D IS+D + RT+ HH ++K+ DK + Sbjct: 63 RAKKEGVTPQDIVDRYHTLIKDSFKEFGISFDVYGRTSSPTHHQLASDFFRKLYDKHEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG-----ADGQY------YNAQHNPVQWM--------- 160 + +Y + D + A+G Y + +P + + Sbjct: 123 EKTSMQYYDEEAHTFLADRYITGECPRCHAEGAYGDQCEKCGSTLSPTELINPKSAISGS 182 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + ++ L ++ L + E H E+ + + S++ GL+ ++SR Sbjct: 183 QPVMKETKHWYLPLDKHEGWLRKWILEDHKEWRPNV--YGQCKSWLDMGLQPRAVSRD-L 239 Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDIL 268 DWGI +P + ++YVW DA Y++ T L PD S K+W +H IGKD + Sbjct: 240 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLIHFIGKDNI 297 Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDAL 325 FH I +PA L + + LP V S+ F+ +G+KIS S + E +++ D L Sbjct: 298 VFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVL 357 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 RY L KD + + R N +L GN V+R++ + K +DG +P G + Sbjct: 358 RYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPACGELND 417 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 D L + V +E+ + + A + ++L ++Y +PW+L KT+ R + Sbjct: 418 YDHETLKEFADVKEEVEKLLNVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMARVA 477 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 T+L ++++++ LAI + F+P + K+ +L Sbjct: 478 TILNISLQLVANLAIAFEPFLPFSSEKLRKML 509 >gi|300727443|ref|ZP_07060852.1| methionine--tRNA ligase [Prevotella bryantii B14] gi|299775323|gb|EFI71922.1| methionine--tRNA ligase [Prevotella bryantii B14] Length = 691 Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 142/565 (25%), Positives = 258/565 (45%), Gaps = 80/565 (14%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K ++ ++ A+ Y N HIGH A + AD+ R+ RL DV+F G+DEHG I Sbjct: 4 KNYKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKKDVIFIGGSDEHGVPITI 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + D+ + ++ + IS+D + RTT + H+ +KK+ D+G + Sbjct: 64 RAKKEGITPQDVCDRYHKIIKESFEEFGISFDIYSRTTSETHNKLASDFFKKLYDEGKLI 123 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ----HNPVQWMEE-------------- 162 + +D Y D+E ++ +Y + HNP + ++ Sbjct: 124 E---------KDSDQYYDEEAHQFLADRYIMGECPHCHNPKAYGDQCEKCGSDLSPMELI 174 Query: 163 ----------------EGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLK 205 + ++ L+ YQ+ L + E H E+ R V KS L Sbjct: 175 NPYSTISGSKPVIKTTKNWYLPLNEYQEWLKQWILEGHKEW------RPNVYGQCKSWL- 227 Query: 206 DLSLSRKT----FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--- 256 D+ L + DWGI +P + ++YVW DA Y++ T L + + K W Sbjct: 228 DMDLQPRAMTRDLDWGIPVPVEGADGKVLYVWFDAPIGYISNTKELCDKEPEKFGNWEQW 287 Query: 257 ---PAD--LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNV 310 P +H IGKD + FH + +P L + + LP V ++ F+ + +KIS S Sbjct: 288 WKDPETRLVHFIGKDNIVFHCVIFPTMLKAHGDYILPDNVPANEFLNLENDKISTSRNWA 347 Query: 311 IDPIEVIEEV--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 + E +++ D LRY L KD + ++R N++L GN V+R++ + Sbjct: 348 VWLDEYLKDFPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQL 407 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRALAQVISLVSEV 424 K ++G++P G E D++ + + ++++E M+ L A + ++L Sbjct: 408 TKKYWNGIVPACGELQEVDKNAI----QEFKDVKEKMEAFLDIFKFREAQKEAMNLARIG 463 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 ++Y +PW++ KT+P R T+LY++++++ LAI + F+P + + ++ + + Sbjct: 464 NKYITECEPWKVWKTDPKRVETILYISLQLVANLAIAFEPFLPFSSKDLRQLINLNSFDW 523 Query: 485 CFQSLDQRLKPGFML---HKTFDPI 506 + LKPG L H F+ I Sbjct: 524 SELGSTELLKPGHQLAEPHLLFEKI 548 >gi|289208948|ref|YP_003461014.1| methionyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] gi|288944579|gb|ADC72278.1| methionyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] Length = 678 Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 131/500 (26%), Positives = 219/500 (43%), Gaps = 43/500 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ RF R G +V++ D HG I A+ Sbjct: 7 KILVTSALPYANGPIHLGHLVEYIQTDIWVRFQRARGHEVIYVCADDAHGTPIMLKARAE 66 Query: 66 GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + D ++ L + +D + T + + ++ + D G I Sbjct: 67 GIEPEELIARVRQEHEADFSEFL-VDFDHYHSTHSDENRELAAHIYTALRDAGHIETRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPV--------------QW 159 Y + D + GA+ QY A ++P+ + Sbjct: 126 DQAYDPEAGMFLPDRFIKGTCPNCGAEEQYGDSCEACGATYSPLDLKDPVSAISGARPES 185 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + E YFF+L ++ L + S L RN++ + +GL D +SR +G + Sbjct: 186 RQSEHYFFKLGDFEAFLREWTGSGR---LQDAIRNKLDEWFDAGLTDWDISRDAPYFGFE 242 Query: 220 IPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273 IPD P YVW+DA Y+ + Y + +W AD H IGKDI FH + Sbjct: 243 IPDAPGKYFYVWLDAPIGYMASFRAYAEKQGLDFDAWWGADSDAELYHFIGKDIAYFHTL 302 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L A P VF HGF+ G+K+SKS G I + ++ + ++LRY+L ++ Sbjct: 303 FWPAMLHGAGFRTPSAVFCHGFLTVNGQKMSKSRGTFIRARDYLDHLNPESLRYYLAAKL 362 Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 G D + D +RVN+DL + N+ SR I K G + + E+ ++ Sbjct: 363 GAGVDDLDLNLDDFVQRVNSDLVGKLVNIASRCAGFITKRSHGELAAELPRPDLHEAFVA 422 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT- 451 + Q + Q I R +++L + ++Y D +PW L K A T Sbjct: 423 EGEAIAQAFEKREYAQAIRR----IMALADQANQYIDEAQPWVLAKQEGREAEVQAISTQ 478 Query: 452 -VEVIRQLAILLQAFVPKLA 470 +++ R L + L +PKLA Sbjct: 479 GLDLFRILIVYLAPVLPKLA 498 >gi|182624277|ref|ZP_02952062.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] gi|177910495|gb|EDT72868.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] Length = 514 Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 125/495 (25%), Positives = 229/495 (46%), Gaps = 29/495 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ I A Y N HIG + D+LAR+HR G +V+F +G+D HG + A+ Sbjct: 2 KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPVLNKAKEI 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + + +++ R F + L S+D F RT + H + + K + +KG IY+ Sbjct: 62 NKSPEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD---KLLSYYES 182 +Y + ++ + +G N ++ V+ FF+LS +QD +L ES Sbjct: 122 EFYCPKCCDTLDEFGIKEGL----CNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQYIMYVWIDALTNY 238 E + I +R +++ GL+D L+R+ +WGI++P +D + +YVWIDAL Y Sbjct: 178 WRENAIKITKR-----YLEGGLRDKILTRE-INWGIEVPVEGFEDKR--VYVWIDALLAY 229 Query: 239 LTTTGYLDNPDG-SKAKFWPADLHVI----GKDILRFHAIYWPAFLLSANLPLPK-KVFS 292 +T + + G S ++W + I GK+ + FH +PA L L + ++FS Sbjct: 230 VTASKIVIEEKGQSLEEYWNNEESRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFS 289 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 ++ +G+ S + I ++E +D++RY+L+ A K+ + N Sbjct: 290 SQYLTLEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNN 349 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 +L IGN +R ++ I K+++G I E ++ R + + Sbjct: 350 ELVGEIGNFTNRVLTFIKKNFNGEIKGE----ELPLQWKNIIRRTYASVGNKFEEGEFKS 405 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + ++ +L+ + + +F+ KPW L N + VLY+ +++ L L+ +P K Sbjct: 406 GVKEMFNLIKQGNDFFNKNKPWILINNNKKKCEEVLYICAQILVALTDLMNPIIPFTCEK 465 Query: 473 IFDILFVADENRCFQ 487 I L + D F+ Sbjct: 466 IKMFLGIKDTKWSFE 480 >gi|228999808|ref|ZP_04159381.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17] gi|228759957|gb|EEM08930.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17] Length = 543 Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 130/528 (24%), Positives = 238/528 (45%), Gaps = 56/528 (10%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ GV Sbjct: 5 FIGGAWPYANGSLHLGHVAGLLPGDILARYYRTKGENVLYVSGSDCNGTPIAIRAKQEGV 64 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K D F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 65 TAKEIADYYHEEFERCFKELGFTYDCYTRTDAQHHHETVQKIFLRLLEEGFIYKKTVEQA 124 Query: 128 YSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE--------------E 163 Y + D E +G +A +P+ +E+ E Sbjct: 125 YCETCTQFLPDRYVEGVCPHCHEPARGDQCDACSAILDPLDLLEKKCKLCGNTPAVKETE 184 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIER----RNEVIS----FVKSGLKDLSLSRKTFD 215 ++F L +Q ++ + + +R R+ I +++ GL+D ++SR Sbjct: 185 HFYFALHKFQPQI-------KDAVAVAKREGAWRDNAIQLTERYLEEGLQDRAVSRD-LP 236 Query: 216 WGIKIP----DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPAD---LHVIGKDI 267 G+ IP +D + +YVWI+A+ Y + + + + +FW + +V GKD Sbjct: 237 IGVPIPVKGYEDKK--IYVWIEAVAGYYSASKRWAEETRQDDGEFWSSSARTYYVHGKDN 294 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 + FH+I WPA LL +P+ + S+ ++ + K+S S + +++E D++R Sbjct: 295 IPFHSIIWPAVLLGIGEKAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIR 354 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 YFL +D + N++L GN V+R++ I K YDG +P E Sbjct: 355 YFLTINAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGAVPKGHINLEL 414 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 E I + + + ++ A+ + V ++YFD Q PW+ ++ P Sbjct: 415 KERI----EELYRSVGNAIEQAHFKVAVETIFETVRFANKYFDEQAPWKQREEEPVACEE 470 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN-RCFQSLDQRL 493 +Y V I A LL+ F+P + ++ ++L + + +C L +R+ Sbjct: 471 TIYTCVYFIVNFAQLLEPFLPFSSERVRNMLAITNTGWKCENILPERI 518 >gi|168217640|ref|ZP_02643265.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239] gi|182380323|gb|EDT77802.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239] Length = 514 Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 125/489 (25%), Positives = 227/489 (46%), Gaps = 29/489 (5%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ I A Y N HIG + D+LAR+HR G +V+F +G+D HG I A+ Sbjct: 2 KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + + +++ R F + L S+D F RT + H + + K + +KG IY+ Sbjct: 62 NKSPEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETE 121 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD---KLLSYYES 182 +Y + ++ + +G N ++ V+ FF+LS +QD +L ES Sbjct: 122 EFYCPKCCDTLDEFGIKEGL----CNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQYIMYVWIDALTNY 238 E + I +R +++ GL+D L+R+ +WGI++P +D + +YVWIDAL Y Sbjct: 178 WRENAIKITKR-----YLEGGLRDKILTRE-INWGIEVPVEGFEDKR--VYVWIDALLAY 229 Query: 239 LTTTGYLDNPDG-SKAKFWPADLHVI----GKDILRFHAIYWPAFLLSANLPLPK-KVFS 292 +T + + G S ++W + I GK+ + FH +PA L L + ++FS Sbjct: 230 VTASKIVIEEKGQSLEEYWNNEESRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFS 289 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 ++ +G+ S + I ++E +D++RY+L+ A K+ + N Sbjct: 290 SQYLTLEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNN 349 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 +L +GN +R ++ I K+++G I E ++ R + + Sbjct: 350 ELVGELGNFTNRVLTFIKKNFNGEIKGE----ELPLQWKNLIRRTYASVGNKFEEGEFKS 405 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + ++ +L+ + + +FD KPW L N + VLY+ +++ L L+ +P K Sbjct: 406 GVKEIFNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICSQILVALTDLMNPIIPFTCEK 465 Query: 473 IFDILFVAD 481 I L + D Sbjct: 466 IKMFLGIKD 474 >gi|229062703|ref|ZP_04200011.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH603] gi|228716572|gb|EEL68271.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH603] Length = 544 Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 126/508 (24%), Positives = 231/508 (45%), Gaps = 47/508 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G VL+ +G+D +G I A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEHVLYVSGSDCNGTPITIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K D+ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTVKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218 E ++F L +Q ++ E + R+ I ++K GL+D ++SR G+ Sbjct: 183 EHFYFALHKFQQQIKEAVEIAKQ---KGTWRDNAIQLTERYLKEGLQDRAVSRD-LPIGV 238 Query: 219 KIP----DDPQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD---LHVIGKDILRF 270 IP +D + +YVWI+A+T Y + + + + +FW + +V GKD + F Sbjct: 239 PIPVAGYEDKK--IYVWIEAVTGYYSASKNWAEETGKDDQEFWDKEAKTYYVHGKDNIPF 296 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 H+I WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 297 HSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFL 356 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +D + N++L GN V+R++ I K Y G +P E + Sbjct: 357 TINAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGTVPKGSIDVELKDK 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 + + + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 417 V----EGLYKSVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIY 472 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477 V +I A LL+ F+P + ++ + L Sbjct: 473 NCVYLIANFAQLLEPFLPFSSERVRNTL 500 >gi|294787920|ref|ZP_06753164.1| methionine--tRNA ligase [Simonsiella muelleri ATCC 29453] gi|294484213|gb|EFG31896.1| methionine--tRNA ligase [Simonsiella muelleri ATCC 29453] Length = 683 Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 136/513 (26%), Positives = 232/513 (45%), Gaps = 54/513 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ K+ +++A+ Y N H+GH E I D+ RF +L G + + D HG I Sbjct: 1 MTQKRKILVTSALPYANGAIHLGHMVEHIQTDIWVRFQKLRGHECHYCCADDTHGTPIML 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AAQ G+T + + + I+YD++ T + +++ + I Sbjct: 61 AAQKQGMTPEQMIAKTHTEHLADFTGFGIAYDNYYSTHSPENKSHSERIYRALKANNKII 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY-------------------YNAQHN 155 + + + + D V KG A QY Y+A Sbjct: 121 SKNINQLFDPEKQMFLPDRFV-KGECPKCHAKDQYGDNCEVCGTTYAPTDLINPYSAVSG 179 Query: 156 PVQWMEE-EGYFFRLSAYQDKLLSYY--ESHPEFILPIERRNEVISFVKSG-LKDLSLSR 211 M+E E +FF+LS D L ++ E++ L E N++ ++K G L D +SR Sbjct: 180 ATPIMKETEHFFFKLSDCADYLKAWTSGETNGRAHLQPEALNKMNEWLKDGELADWDISR 239 Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG----------SKAKFWPADLH 261 +G +IPD+P YVW+DA Y+ + L +G S+A+ + H Sbjct: 240 DAPYFGFEIPDEPNKYFYVWLDAPVGYMASFQNLCERNGLNFDDFFGKDSQAELY----H 295 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321 IGKDIL FHA++W A L + P +F+HGF+ G+K+SKS G I + ++G Sbjct: 296 FIGKDILYFHALFWTAMLEYSGHRAPNGIFAHGFLTVDGQKMSKSRGTFITAKSYL-DLG 354 Query: 322 VDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 ++ LRY++ ++ +D + + R+N+DL N+ SR+ I K + G + Sbjct: 355 LNPEWLRYYIAAKLNSKIEDIDLNLNDFIARINSDLIGKYINIASRAAGFIHKKFSGSLK 414 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 S +++ + + I ++ +++ ++AL +++ L V+ Y DA KPWEL K Sbjct: 415 DV-----SQSTLIKQLTEQSESIAQDYESREYNKALREIMGLADLVNEYVDANKPWELAK 469 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 + S + V E+I IL P L N Sbjct: 470 QD-GMESRLHEVCSELINAFKILTAYLFPVLPN 501 >gi|226194485|ref|ZP_03790083.1| methionine--tRNA ligase [Burkholderia pseudomallei Pakistan 9] gi|225933570|gb|EEH29559.1| methionine--tRNA ligase [Burkholderia pseudomallei Pakistan 9] Length = 717 Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 133/517 (25%), Positives = 223/517 (43%), Gaps = 47/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G ++ + D HG + A+ Sbjct: 9 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 68 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 69 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 128 Query: 124 YSGWYSLRDEAY------------------YNDDEVYKGADGQYYNAQH--------NPV 157 Y + + Y D G Q + H PV Sbjct: 129 IEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAPV 188 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 + YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 189 RKTSTH-YFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 245 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L G W H IGKDI Sbjct: 246 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 305 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 306 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 365 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ +LK +DG + + Sbjct: 366 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 421 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +L+ + +I + + + RAL Q + L V+ Y D+ KPWEL K N Sbjct: 422 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 481 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + L +A Sbjct: 482 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 518 >gi|207742639|ref|YP_002259031.1| methionyl-trna synthetase (methionine--trna ligase)(metrs) protein [Ralstonia solanacearum IPO1609] gi|206594033|emb|CAQ60960.1| methionyl-trna synthetase (methionine--trna ligase)(metrs) protein [Ralstonia solanacearum IPO1609] Length = 688 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 141/533 (26%), Positives = 234/533 (43%), Gaps = 50/533 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ER ++ +++A+ Y N HIGH E I D+ RF R+ G ++ + D HG + Sbjct: 1 MSER-RILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHEIYYVGADDTHGTPVML 59 Query: 61 AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +++ + + RD + L +S+D++ T + + C ++ K+ + G I Sbjct: 60 RAEKEGITPRQLIERVWTEHKRDFDNFL-VSFDNYYSTDSDENRELCERVYLKLKEAGLI 118 Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM-------- 160 +Y E + D E K GA QY A + P Sbjct: 119 DVREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSG 178 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210 E YFF+LS + ++ + E N++ ++ +S L D +S Sbjct: 179 ATPVRKSSEHYFFKLS--DPRCETFLREWVADLAQPEATNKMREWLGDEGESTLSDWDIS 236 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIG 264 R +G +IP P YVW+DA Y + L G W + H IG Sbjct: 237 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSTHSTAEQYHFIG 296 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 KDIL FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + Sbjct: 297 KDILYFHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPE 356 Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ ++ A +D + D RVN+DL N+ SRS ++K ++G + Sbjct: 357 WLRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVNDAAL 416 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TN 440 ++ +I + + + +AL V+ L V+ Y D +KPW+L K Sbjct: 417 ----GNPLMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAYVDTEKPWDLAKDEAQ 472 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493 D+ V +E R LA+ L+ +P +I L V N ++++D +L Sbjct: 473 RDKLHAACSVALEAFRLLAVYLKPILPSTVARIEAFLNVEPLN--WRAIDAQL 523 >gi|207721382|ref|YP_002251823.1| methionyl-trna synthetase [Ralstonia solanacearum MolK2] gi|206586541|emb|CAQ17128.1| methionyl-trna synthetase (methionine--trna ligase)(metrs) protein [Ralstonia solanacearum MolK2] Length = 688 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 141/533 (26%), Positives = 234/533 (43%), Gaps = 50/533 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ER ++ +++A+ Y N HIGH E I D+ RF R+ G ++ + D HG + Sbjct: 1 MSER-RILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHEIYYVGADDTHGTPVML 59 Query: 61 AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +++ + + RD + L +S+D++ T + + C ++ K+ + G I Sbjct: 60 RAEKEGITPRQLIERVWTEHKRDFDNFL-VSFDNYYSTDSDENRELCERVYLKLKEAGLI 118 Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM-------- 160 +Y E + D E K GA QY A + P Sbjct: 119 DVREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSG 178 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210 E YFF+LS + ++ + E N++ ++ +S L D +S Sbjct: 179 ATPVRKSSEHYFFKLS--DPRCETFLREWVADLAQPEATNKMREWLGDEGESTLSDWDIS 236 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIG 264 R +G +IP P YVW+DA Y + L G W + H IG Sbjct: 237 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSTHSTAEQYHFIG 296 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 KDIL FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + Sbjct: 297 KDILYFHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPE 356 Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ ++ A +D + D RVN+DL N+ SRS ++K ++G + Sbjct: 357 WLRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVNDAAL 416 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TN 440 ++ +I + + + +AL V+ L V+ Y D +KPW+L K Sbjct: 417 ----GNPLMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAYVDTEKPWDLAKDEAQ 472 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493 D+ V +E R LA+ L+ +P +I L V N ++++D +L Sbjct: 473 RDKLHAACSVALEAFRLLAVYLKPILPSTVARIEAFLNVEPLN--WRAIDAQL 523 >gi|293372431|ref|ZP_06618815.1| methionine--tRNA ligase [Bacteroides ovatus SD CMC 3f] gi|292632614|gb|EFF51208.1| methionine--tRNA ligase [Bacteroides ovatus SD CMC 3f] Length = 679 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 140/517 (27%), Positives = 241/517 (46%), Gaps = 51/517 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ ++ IS+D + RTT HH +K + +KG+ Sbjct: 63 RAKKEGITPQDVVDRYHSLIKESFKEFGISFDVYSRTTSPTHHQLASDFFKTLYNKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + ++G Y + + Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210 PV E + ++ L ++ L + E H E+ R N + S++ GL+ ++S Sbjct: 183 KPVM-KETKHWYLPLDKHEAWLRKWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236 Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263 R DWGI +P + ++YVW DA Y++ T L PD + W D +H I Sbjct: 237 RD-LDWGIPVPIEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFI 292 Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320 GKD + FH I +PA L + + LP V S+ F+ +G+KIS S + E + + Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPG 352 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D LRY L KD + + R N +L GN V+R++ + K +DG +P Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGRVPAQ 412 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 G+ T+ D+ L + V E+ + + A + ++L ++Y +PW+L KT+ Sbjct: 413 GSLTDYDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTD 472 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +R T+L ++++++ LAI F+P + K+ +L Sbjct: 473 MERVGTILNISLQLVANLAIAFDPFLPFSSEKLRKML 509 >gi|242314917|ref|ZP_04813933.1| methionine--tRNA ligase [Burkholderia pseudomallei 1106b] gi|254190803|ref|ZP_04897310.1| methionyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] gi|157938478|gb|EDO94148.1| methionyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] gi|242138156|gb|EES24558.1| methionine--tRNA ligase [Burkholderia pseudomallei 1106b] Length = 717 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 133/517 (25%), Positives = 225/517 (43%), Gaps = 47/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G ++ + D HG + A+ Sbjct: 9 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 68 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 69 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 128 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME---------- 161 Y + + D KG A QY ++ + P + Sbjct: 129 IEQAYDPVRQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAP 187 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 188 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 245 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L G W H IGKDI Sbjct: 246 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCQRRGLDFDAWIRKDSTTEQYHFIGKDI 305 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 306 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 365 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ +LK +DG + + Sbjct: 366 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 421 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +L+ + +I + + + RAL Q + L V+ Y D+ KPWEL K N Sbjct: 422 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 481 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + L +A Sbjct: 482 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 518 >gi|299144832|ref|ZP_07037900.1| methionine--tRNA ligase [Bacteroides sp. 3_1_23] gi|298515323|gb|EFI39204.1| methionine--tRNA ligase [Bacteroides sp. 3_1_23] Length = 679 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 140/517 (27%), Positives = 241/517 (46%), Gaps = 51/517 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + IS+D + RTT HH +K + +KG+ Sbjct: 63 RAKKEGITPQDVVDRYHSLIKKSFEEFGISFDVYSRTTSPTHHQLASDFFKTLYNKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + ++G Y + + Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210 PV E + ++ L ++ L + E H E+ R N + S++ GL+ ++S Sbjct: 183 KPVM-KETKHWYLPLDKHEAWLRKWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236 Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263 R DWGI +P + ++YVW DA Y++ T L PD + W D +H I Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFI 292 Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320 GKD + FH I +PA L + + LP V S+ F+ +G+KIS S + E + + Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPG 352 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D LRY L KD + + R N +L GN V+R++ + K +DG +P Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGRVPAQ 412 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 G+ T+ D+ L + V E+ + + A + ++L ++Y +PW+L KT+ Sbjct: 413 GSLTDYDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTD 472 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +R T+L ++++++ LAI F+P + K+ +L Sbjct: 473 MERVGTILNISLQLVANLAIAFDPFLPFSSEKLRKML 509 >gi|121598252|ref|YP_993613.1| methionyl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124385371|ref|YP_001028926.1| methionyl-tRNA synthetase [Burkholderia mallei NCTC 10229] gi|126450764|ref|YP_001081161.1| methionyl-tRNA synthetase [Burkholderia mallei NCTC 10247] gi|167003048|ref|ZP_02268838.1| methionine--tRNA ligase [Burkholderia mallei PRL-20] gi|238563610|ref|ZP_00438586.2| methionine--tRNA ligase [Burkholderia mallei GB8 horse 4] gi|254177483|ref|ZP_04884138.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|254199383|ref|ZP_04905749.1| methionyl-tRNA synthetase [Burkholderia mallei FMH] gi|254205698|ref|ZP_04912050.1| methionyl-tRNA synthetase [Burkholderia mallei JHU] gi|254357859|ref|ZP_04974132.1| methionyl-tRNA synthetase [Burkholderia mallei 2002721280] gi|121227062|gb|ABM49580.1| methionyl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124293391|gb|ABN02660.1| methionine--tRNA ligase [Burkholderia mallei NCTC 10229] gi|126243634|gb|ABO06727.1| methionine--tRNA ligase [Burkholderia mallei NCTC 10247] gi|147748979|gb|EDK56053.1| methionyl-tRNA synthetase [Burkholderia mallei FMH] gi|147753141|gb|EDK60206.1| methionyl-tRNA synthetase [Burkholderia mallei JHU] gi|148026986|gb|EDK85007.1| methionyl-tRNA synthetase [Burkholderia mallei 2002721280] gi|160698522|gb|EDP88492.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|238520348|gb|EEP83809.1| methionine--tRNA ligase [Burkholderia mallei GB8 horse 4] gi|243061352|gb|EES43538.1| methionine--tRNA ligase [Burkholderia mallei PRL-20] Length = 717 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 133/517 (25%), Positives = 225/517 (43%), Gaps = 47/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G ++ + D HG + A+ Sbjct: 9 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 68 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 69 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 128 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME---------- 161 Y + + D KG A QY ++ + P + Sbjct: 129 IEQAYDPVRQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAP 187 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 188 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 245 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L G W H IGKDI Sbjct: 246 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCQRRGLDFDAWIRKDSTTEQYHFIGKDI 305 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 306 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 365 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ +LK +DG + + Sbjct: 366 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 421 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +L+ + +I + + + RAL Q + L V+ Y D+ KPWEL K N Sbjct: 422 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 481 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + L +A Sbjct: 482 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 518 >gi|170691989|ref|ZP_02883153.1| methionyl-tRNA synthetase [Burkholderia graminis C4D1M] gi|170143273|gb|EDT11437.1| methionyl-tRNA synthetase [Burkholderia graminis C4D1M] Length = 715 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 136/516 (26%), Positives = 226/516 (43%), Gaps = 47/516 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG + A+ Sbjct: 16 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYVGADDTHGTPVMLRAE 75 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K +D+ + + D IS+D++ T + ++ + + G I Sbjct: 76 KEGITPKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEETRVLSENIYLALKEAGLIDARD 135 Query: 124 YSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWME----------- 161 Y E + D E K GA QY + + P + + Sbjct: 136 IEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYQPTELVNPYSVVSGATPI 195 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214 YFFRLS + ++ + + E N++ ++ ++ L D +SR Sbjct: 196 RKTSTHYFFRLS--DPRCENFLRAWVGGLAQPEATNKMREWLGDAGEAKLADWDISRDAP 253 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268 +G +IP P YVW+DA Y + L G W H IGKDIL Sbjct: 254 YFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAQKRGLDFDAWVRKGSTAEQYHFIGKDIL 313 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327 FH ++WPA L + P VF+HGF+ G K+SKS G I VI+ + + LRY Sbjct: 314 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIDTGLNPEWLRY 373 Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ + +D + D + RVN+DL N+ SR+ ++K +DG + + Sbjct: 374 YFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAM 429 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 +L+ + +I + + + RAL Q + L V+ Y D KPW+ K +P A Sbjct: 430 QHPLLASLRAAVPQIAAHYEAREYSRALRQTMELADAVNAYVDTAKPWDQAK-DPANAVA 488 Query: 447 V---LYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + V++E R L++ L+ +PKLA + L + Sbjct: 489 LHETCSVSIEAFRLLSLALKPVLPKLAEAVEGFLGI 524 >gi|295675816|ref|YP_003604340.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1002] gi|295435659|gb|ADG14829.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1002] Length = 711 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 138/513 (26%), Positives = 221/513 (43%), Gaps = 53/513 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG + A+ Sbjct: 16 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYVGADDTHGTPVMLRAE 75 Query: 64 NAGVTTKVFVD----QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 G+T K +D ++ R+F D IS+D++ T + ++ + + G I Sbjct: 76 KEGLTPKQLIDRVWLEHKRDF----DSFGISFDNYYSTDSDENRVLSENVYLALKEAGLI 131 Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWME------- 161 Y E + D E K GA QY + + P + + Sbjct: 132 DAREIEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYQPTELVNPYSVVSG 191 Query: 162 -------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210 YFFRLS + S+ + E N++ ++ ++ L D +S Sbjct: 192 ATPIRKTSTHYFFRLS--DPRCESFLREWVGGLAQPEATNKMREWLGDAGEAKLADWDIS 249 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIG 264 R +G +IP P YVW+DA Y + L G W H IG Sbjct: 250 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAEKRGLDFDAWVRQGSAAEQYHFIG 309 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 KDIL FH ++WPA L + P VF+HGF+ G K+SKS G I VI+ + + Sbjct: 310 KDILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIDTGLNPE 369 Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ ++ + +D + D + RVN+DL N+ SR+ ++K +DG + Sbjct: 370 WLRYYFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD--- 426 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TN 440 + +L L +I + + + RAL Q + L V+ Y D KPW+ K N Sbjct: 427 -SAMHHPLLGTLRAALPQIAAHYEAREYSRALRQTMELADAVNAYVDTAKPWDQAKDPAN 485 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 V++E R L++ L+ +PKLA + Sbjct: 486 AVALHETCSVSIEAFRLLSLALKPVLPKLAEAV 518 >gi|134281206|ref|ZP_01767915.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 305] gi|134247512|gb|EBA47597.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 305] Length = 717 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 133/517 (25%), Positives = 223/517 (43%), Gaps = 47/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G ++ + D HG + A+ Sbjct: 9 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 68 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 69 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 128 Query: 124 YSGWYSLRDEAY------------------YNDDEVYKGADGQYYNAQH--------NPV 157 Y + + Y D G Q + H PV Sbjct: 129 IEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAPV 188 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 + YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 189 RKTSTH-YFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 245 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L G W H IGKDI Sbjct: 246 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 305 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 306 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 365 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ +LK +DG + + Sbjct: 366 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 421 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +L+ + +I + + + RAL Q + L V+ Y D+ KPWEL K N Sbjct: 422 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 481 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + L +A Sbjct: 482 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 518 >gi|120598605|ref|YP_963179.1| methionyl-tRNA synthetase [Shewanella sp. W3-18-1] gi|146293316|ref|YP_001183740.1| methionyl-tRNA synthetase [Shewanella putrefaciens CN-32] gi|187647773|sp|A4Y7K8|SYM_SHEPC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|187647775|sp|A1RIY0|SYM_SHESW RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|120558698|gb|ABM24625.1| methionyl-tRNA synthetase [Shewanella sp. W3-18-1] gi|145565006|gb|ABP75941.1| methionyl-tRNA synthetase [Shewanella putrefaciens CN-32] Length = 689 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 129/511 (25%), Positives = 235/511 (45%), Gaps = 55/511 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ +R+ +L G + + D HG I AQ Sbjct: 5 QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL----WKKISDKGD 118 G+ + + Q N + +D AD +I++D++ T H D R+L + K+ G Sbjct: 65 QLGLAPEEMIAQVNKEHQQDFAD-FNIAFDNYHST----HSDENRVLASDIYLKLRTNGY 119 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------ 160 I S + +++ + D KG + QY A ++P + + Sbjct: 120 IKSKSISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAV 178 Query: 161 --------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212 + E +FF L A++ L + S L E N++ + + GL+ ++R Sbjct: 179 SGATPVMKDTEHFFFDLPAFEGMLKEWTRSG---ALQTEMANKLDEWFEQGLQQWDITRD 235 Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGK 265 +G +IPD P YVW+DA Y+ + L P+ S +FW D H IGK Sbjct: 236 APYFGFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRPELSFDEFWAKDSKAEVYHFIGK 295 Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 DI+ FH+++WPA L + P V++HG++ G K+SKS G I ++ + + L Sbjct: 296 DIVYFHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYL 355 Query: 326 RYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 RY+ +++ D + + +RVN+DL + NL SR+ I K +DG + Sbjct: 356 RYYYAAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKI---- 411 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PD 442 +D ++ ++I E + + +A+ ++++L + + PW++ K + + Sbjct: 412 -ADTTLTEAFLAKQEQIAEFYETREYGKAMREIMALADIANGFVADAAPWQMVKQDDQQE 470 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 A V + + R L L+ +P+LA + Sbjct: 471 AAHQVCSNALNLFRILVTYLKPVLPRLAQDV 501 >gi|126440819|ref|YP_001058102.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 668] gi|167909986|ref|ZP_02497077.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 112] gi|254196314|ref|ZP_04902738.1| methionyl-tRNA synthetase [Burkholderia pseudomallei S13] gi|126220312|gb|ABN83818.1| methionine--tRNA ligase [Burkholderia pseudomallei 668] gi|169653057|gb|EDS85750.1| methionyl-tRNA synthetase [Burkholderia pseudomallei S13] Length = 717 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 133/517 (25%), Positives = 225/517 (43%), Gaps = 47/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G ++ + D HG + A+ Sbjct: 9 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 68 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 69 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 128 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME---------- 161 Y + + D KG A QY ++ + P + Sbjct: 129 IEQAYDPVRQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAP 187 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 188 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 245 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L G W H IGKDI Sbjct: 246 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 305 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 306 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 365 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ +LK +DG + + Sbjct: 366 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 421 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +L+ + +I + + + RAL Q + L V+ Y D+ KPWEL K N Sbjct: 422 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 481 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + L +A Sbjct: 482 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 518 >gi|261879055|ref|ZP_06005482.1| methionine-tRNA ligase [Prevotella bergensis DSM 17361] gi|270334337|gb|EFA45123.1| methionine-tRNA ligase [Prevotella bergensis DSM 17361] Length = 691 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 141/545 (25%), Positives = 248/545 (45%), Gaps = 53/545 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ ++ A+ Y N HIGH A + AD+ R+ RL DV+F G+DEHG I Sbjct: 4 KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQDVVFIGGSDEHGVPITI 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + D+ + RD IS+D + RTT K HH +KK+ D G + Sbjct: 64 RAKKEGITPQEVCDRYHKMIRDSFKEFGISFDIYSRTTSKIHHKFAADFFKKLYDDGKLV 123 Query: 121 KGCYSGWYSLRDEAYYND-----------------DEVYKGA---------DGQYYNAQH 154 + Y + D D+ K D + Sbjct: 124 EKETEQLYDEEAHQFLADRYITGTCPHCGNPNAYGDQCEKCGSDLSPEELIDPHSTISGA 183 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 PV+ + + ++ L+ YQ L ++ H E+ R+ V KS L DL L + Sbjct: 184 KPVKKVTK-NWYLPLNDYQQWLKAWILNGHKEW------RSNVYGQCKSWL-DLDLQPRA 235 Query: 214 ----FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYL--DNPD--GSKAKFWPAD---- 259 DWGI +P + ++YVW DA Y++ T L NP+ G+ K+W Sbjct: 236 MTRDLDWGIPVPVEGADGKVLYVWFDAPIGYISNTKELCDSNPEQWGTWQKWWQDPETRL 295 Query: 260 LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 +H IGKD + FH + +P L + + LP V ++ F+ + +KIS S + E + Sbjct: 296 VHFIGKDNIVFHCLIFPTMLKAHGDYILPDNVPANEFLNLENDKISTSKNWAVWLHEYLV 355 Query: 319 EV--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 + D LRY L KD + ++ N++L GN V+R++ + K ++G+ Sbjct: 356 DFPEKQDVLRYVLTANAPETKDNNFMWKDFQEHNNSELVGVYGNFVNRALQLTKKYWNGV 415 Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 +P G ++D + + +++ + A + ++L +RY +PW++ Sbjct: 416 VPACGELNDTDRQTIQEFKDIKEKVEAYLDVFKFREAQKEAMNLARIGNRYITECEPWKV 475 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496 KT+P R T+LY++++++ LAI + F+P + K+ ++ + + + + LKPG Sbjct: 476 WKTDPKRVETILYISLQLVANLAIAFEPFLPFSSKKLRGMIGMENFDWSELGSIELLKPG 535 Query: 497 FMLHK 501 L++ Sbjct: 536 AQLNE 540 >gi|187649793|sp|A3N6Y1|SYM_BURP6 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS Length = 725 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 133/517 (25%), Positives = 223/517 (43%), Gaps = 47/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G ++ + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 77 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 136 Query: 124 YSGWYSLRDEAY------------------YNDDEVYKGADGQYYNAQH--------NPV 157 Y + + Y D G Q + H PV Sbjct: 137 IEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAPV 196 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 + YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 197 RKTSTH-YFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L G W H IGKDI Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 313 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ +LK +DG + + Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +L+ + +I + + + RAL Q + L V+ Y D+ KPWEL K N Sbjct: 430 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 489 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + L +A Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 526 >gi|167823191|ref|ZP_02454662.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 9] Length = 725 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 133/517 (25%), Positives = 225/517 (43%), Gaps = 47/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G ++ + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 77 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 136 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME---------- 161 Y + + D KG A QY ++ + P + Sbjct: 137 IEQAYDPVRQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAP 195 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 196 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L G W H IGKDI Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 313 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ +LK +DG + + Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +L+ + +I + + + RAL Q + L V+ Y D+ KPWEL K N Sbjct: 430 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 489 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + L +A Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 526 >gi|167814737|ref|ZP_02446417.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 91] gi|217419503|ref|ZP_03451009.1| methionine--tRNA ligase [Burkholderia pseudomallei 576] gi|217396807|gb|EEC36823.1| methionine--tRNA ligase [Burkholderia pseudomallei 576] Length = 717 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 133/517 (25%), Positives = 225/517 (43%), Gaps = 47/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G ++ + D HG + A+ Sbjct: 9 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 68 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 69 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 128 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME---------- 161 Y + + D KG A QY ++ + P + Sbjct: 129 IEQAYDPVRQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAP 187 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 188 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 245 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L G W H IGKDI Sbjct: 246 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 305 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 306 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 365 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ +LK +DG + + Sbjct: 366 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 421 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +L+ + +I + + + RAL Q + L V+ Y D+ KPWEL K N Sbjct: 422 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 481 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + L +A Sbjct: 482 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 518 >gi|171320877|ref|ZP_02909876.1| methionyl-tRNA synthetase [Burkholderia ambifaria MEX-5] gi|171093862|gb|EDT38994.1| methionyl-tRNA synthetase [Burkholderia ambifaria MEX-5] Length = 723 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 132/516 (25%), Positives = 223/516 (43%), Gaps = 45/516 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT K +++ + D +S+D+F T + ++ + + G I + Sbjct: 77 KEGVTPKQLIERVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSENIYLALKENGLIAERA 136 Query: 124 YSGWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME----------- 161 Y E + D E K G + + + + P + + Sbjct: 137 IEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPYSVVSGATPV 196 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214 +FFRLS + S+ + E N++ ++ ++ L D +SR Sbjct: 197 RKTSTHHFFRLS--DPRCESFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDAP 254 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268 +G +IP P YVW+DA Y + L + +G W H IGKDIL Sbjct: 255 YFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDREGIDFDAWIRAGSTAEQYHFIGKDIL 314 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327 FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LRY Sbjct: 315 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRY 374 Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ A +D + D + RVN+DL N+ SR+ ++K +DG + + Sbjct: 375 YFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAM 430 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444 + +++ + I + + + RAL + L EV+ Y D KPWEL K N Sbjct: 431 NHPLVAKLRDAIASIAAHYEGREYSRALRHTMELADEVNAYVDGAKPWELAKDPANAVAL 490 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + VA Sbjct: 491 HETCSVSLEAFRLLSLALKPVMPRVAEAVEAFFGVA 526 >gi|319426616|gb|ADV54690.1| methionyl-tRNA synthetase [Shewanella putrefaciens 200] Length = 689 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 129/511 (25%), Positives = 235/511 (45%), Gaps = 55/511 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ +R+ +L G + + D HG I AQ Sbjct: 5 QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL----WKKISDKGD 118 G+ + + Q N + +D AD +I++D++ T H D R+L + K+ G Sbjct: 65 QLGLAPEEMIAQVNKEHQQDFAD-FNIAFDNYHST----HSDENRVLASDIYLKLRANGY 119 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------ 160 I S + +++ + D KG + QY A ++P + + Sbjct: 120 IKSKSISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAV 178 Query: 161 --------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212 + E +FF L A++ L + S L E N++ + + GL+ ++R Sbjct: 179 SGATPVMKDTEHFFFDLPAFEGMLKEWTRSG---ALQTEMANKLDEWFEQGLQQWDITRD 235 Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGK 265 +G +IPD P YVW+DA Y+ + L P+ S +FW D H IGK Sbjct: 236 APYFGFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRPELSFDEFWAKDSKAEVYHFIGK 295 Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 DI+ FH+++WPA L + P V++HG++ G K+SKS G I ++ + + L Sbjct: 296 DIVYFHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYL 355 Query: 326 RYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 RY+ +++ D + + +RVN+DL + NL SR+ I K +DG + Sbjct: 356 RYYYAAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKI---- 411 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PD 442 +D ++ ++I E + + +A+ ++++L + + PW++ K + + Sbjct: 412 -ADTTLTEAFLAKQEQIAEFYETREYGKAMREIMALADIANGFVADAAPWQMVKQDDQQE 470 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 A V + + R L L+ +P+LA + Sbjct: 471 AAHQVCSNALNLFRILVTYLKPVLPRLAQDV 501 >gi|167718572|ref|ZP_02401808.1| methionyl-tRNA synthetase [Burkholderia pseudomallei DM98] gi|167893288|ref|ZP_02480690.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 7894] gi|237811322|ref|YP_002895773.1| methionine--tRNA ligase [Burkholderia pseudomallei MSHR346] gi|237504542|gb|ACQ96860.1| methionine--tRNA ligase [Burkholderia pseudomallei MSHR346] Length = 725 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 133/517 (25%), Positives = 223/517 (43%), Gaps = 47/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G ++ + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 77 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 136 Query: 124 YSGWYSLRDEAY------------------YNDDEVYKGADGQYYNAQH--------NPV 157 Y + + Y D G Q + H PV Sbjct: 137 IEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAPV 196 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 + YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 197 RKTSTH-YFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L G W H IGKDI Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 313 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ +LK +DG + + Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +L+ + +I + + + RAL Q + L V+ Y D+ KPWEL K N Sbjct: 430 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 489 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + L +A Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 526 >gi|53718640|ref|YP_107626.1| methionyl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|126454059|ref|YP_001065337.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|167844753|ref|ZP_02470261.1| methionyl-tRNA synthetase [Burkholderia pseudomallei B7210] gi|167918019|ref|ZP_02505110.1| methionyl-tRNA synthetase [Burkholderia pseudomallei BCC215] gi|254298272|ref|ZP_04965724.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 406e] gi|68565972|sp|Q63W90|SYM_BURPS RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|187647709|sp|A3NSL6|SYM_BURP0 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|52209054|emb|CAH34994.1| methionyl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|126227701|gb|ABN91241.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|157808199|gb|EDO85369.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 406e] Length = 725 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 133/517 (25%), Positives = 225/517 (43%), Gaps = 47/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G ++ + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 77 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 136 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME---------- 161 Y + + D KG A QY ++ + P + Sbjct: 137 IEQAYDPVRQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAP 195 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 196 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L G W H IGKDI Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCQRRGLDFDAWIRKDSTTEQYHFIGKDI 313 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ +LK +DG + + Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +L+ + +I + + + RAL Q + L V+ Y D+ KPWEL K N Sbjct: 430 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 489 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + L +A Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 526 >gi|229014224|ref|ZP_04171345.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048] gi|228747178|gb|EEL97060.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048] Length = 544 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 126/508 (24%), Positives = 231/508 (45%), Gaps = 47/508 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G VL+ +G+D +G I A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEHVLYVSGSDCNGTPITIRAKQDG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 VT K D+ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VTVKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218 E ++F L +Q ++ E + R+ I ++K GL+D ++SR G+ Sbjct: 183 EHFYFALHKFQQQIKEAVEIAKQ---KGTWRDNAIQLTERYLKEGLQDRAVSRD-LPIGV 238 Query: 219 KIP----DDPQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD---LHVIGKDILRF 270 IP +D + +YVWI+A+T Y + + + + +FW + +V GKD + F Sbjct: 239 PIPVAGYEDKK--IYVWIEAVTGYYSASKNWAEETGKDDQEFWDKEAETYYVHGKDNIPF 296 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 H+I WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 297 HSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFL 356 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +D + N++L GN V+R++ I K Y G +P E + Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGTVPKGSIDVELKDK 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 + + + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 417 V----EGLYKSVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIY 472 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477 V +I A LL+ F+P + ++ + L Sbjct: 473 NCVYLIANFAQLLEPFLPFSSERVRNTL 500 >gi|167901747|ref|ZP_02488952.1| methionyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177] Length = 725 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 133/517 (25%), Positives = 223/517 (43%), Gaps = 47/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G ++ + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 77 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 136 Query: 124 YSGWYSLRDEAY------------------YNDDEVYKGADGQYYNAQH--------NPV 157 Y + + Y D G Q + H PV Sbjct: 137 IEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAPV 196 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 + YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 197 RKTSTH-YFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L G W H IGKDI Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 313 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ +LK +DG + + Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +L+ + +I + + + RAL Q + L V+ Y D+ KPWEL K N Sbjct: 430 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 489 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + L +A Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 526 >gi|254181405|ref|ZP_04888002.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1655] gi|184211943|gb|EDU08986.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1655] Length = 725 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 133/517 (25%), Positives = 223/517 (43%), Gaps = 47/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G ++ + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 77 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 136 Query: 124 YSGWYSLRDEAY------------------YNDDEVYKGADGQYYNAQH--------NPV 157 Y + + Y D G Q + H PV Sbjct: 137 IEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAPV 196 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 + YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 197 RKTSTH-YFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L G W H IGKDI Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 313 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ +LK +DG + + Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +L+ + +I + + + RAL Q + L V+ Y D+ KPWEL K N Sbjct: 430 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 489 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + L +A Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 526 >gi|53725214|ref|YP_102479.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 23344] gi|68565971|sp|Q62LE0|SYM_BURMA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|187649794|sp|A3MLM5|SYM_BURM7 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|187649795|sp|A2SAF7|SYM_BURM9 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|187649796|sp|A1V5W0|SYM_BURMS RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|52428637|gb|AAU49230.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 23344] Length = 725 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 133/517 (25%), Positives = 225/517 (43%), Gaps = 47/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G ++ + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 77 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 136 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME---------- 161 Y + + D KG A QY ++ + P + Sbjct: 137 IEQAYDPVRQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAP 195 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 196 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L G W H IGKDI Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCQRRGLDFDAWIRKDSTTEQYHFIGKDI 313 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ +LK +DG + + Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +L+ + +I + + + RAL Q + L V+ Y D+ KPWEL K N Sbjct: 430 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 489 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + L +A Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 526 >gi|167737601|ref|ZP_02410375.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 14] Length = 725 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 133/517 (25%), Positives = 225/517 (43%), Gaps = 47/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G ++ + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 77 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 136 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME---------- 161 Y + + D KG A QY ++ + P + Sbjct: 137 IEQAYDPVRQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAP 195 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 196 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L G W H IGKDI Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCQRRGLDFDAWIRKDSTTEQYHFIGKDI 313 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ +LK +DG + + Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +L+ + +I + + + RAL Q + L V+ Y D+ KPWEL K N Sbjct: 430 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 489 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + L +A Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 526 >gi|153806949|ref|ZP_01959617.1| hypothetical protein BACCAC_01225 [Bacteroides caccae ATCC 43185] gi|149130069|gb|EDM21279.1| hypothetical protein BACCAC_01225 [Bacteroides caccae ATCC 43185] Length = 679 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 140/517 (27%), Positives = 240/517 (46%), Gaps = 51/517 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + IS+D + RTT HH +K + +KG+ Sbjct: 63 RAKKEGITPQDVVDRYHTLIKKSFEEFGISFDVYSRTTSPTHHQLASDFFKTLYNKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + ++G Y + + Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210 PV E + ++ L ++ L + E H E+ R N + S++ GL+ ++S Sbjct: 183 KPVM-KETKHWYLPLDKHEGWLRKWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236 Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263 R DWGI +P + ++YVW DA Y++ T L PD + W D +H I Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFI 292 Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320 GKD + FH I +PA L + + LP V S+ F+ +G+KIS S + E + + Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPG 352 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D LRY L KD + + R N +L GN V+R++ + K +DG +P Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGCVPAQ 412 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 G T+ D+ L + V E+ + + A + ++L ++Y +PW+L KT+ Sbjct: 413 GELTDYDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTD 472 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +R T+L ++++++ LAI F+P + K+ +L Sbjct: 473 MERVGTILNISLQLVANLAIAFDPFLPFSSEKLRKML 509 >gi|260641818|ref|ZP_05413598.2| methionine--tRNA ligase [Bacteroides finegoldii DSM 17565] gi|260624529|gb|EEX47400.1| methionine--tRNA ligase [Bacteroides finegoldii DSM 17565] Length = 711 Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 140/517 (27%), Positives = 240/517 (46%), Gaps = 51/517 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I Sbjct: 35 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 94 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + IS+D + RT+ HH +K + DKG+ Sbjct: 95 RAKKEGITPQDVVDRYHSLIKKSFEEFGISFDVYSRTSSPTHHQLASDFFKTLYDKGEFI 154 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + ++G Y + + Sbjct: 155 EKTSEQYYDKEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 214 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210 PV E + ++ L ++ L + E H E+ R N + S++ GL+ ++S Sbjct: 215 KPVM-KETKHWYLPLDKHEAWLRKWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 268 Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263 R DWGI +P + ++YVW DA Y++ T L PD + W D +H I Sbjct: 269 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFI 324 Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320 GKD + FH I +PA L + + LP V S+ F+ +G+KIS S + E + + Sbjct: 325 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPG 384 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D LRY L KD + + R N +L GN V+R++ + K +DG +P Sbjct: 385 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGKVPAQ 444 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 G T+ D+ L + V E+ + + A + ++L ++Y +PW+L KT+ Sbjct: 445 GELTDYDKETLKEFADVKAEVEKLLDIFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTD 504 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +R T+L ++++++ LAI F+P + K+ +L Sbjct: 505 MERVGTILNISLQLVANLAIAFDPFLPFSSEKLRKML 541 >gi|76810283|ref|YP_332622.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1710b] gi|254260859|ref|ZP_04951913.1| methionine--tRNA ligase [Burkholderia pseudomallei 1710a] gi|123599931|sp|Q3JUY1|SYM_BURP1 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|76579736|gb|ABA49211.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1710b] gi|254219548|gb|EET08932.1| methionine--tRNA ligase [Burkholderia pseudomallei 1710a] Length = 725 Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 133/517 (25%), Positives = 223/517 (43%), Gaps = 47/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G ++ + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 77 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 136 Query: 124 YSGWYSLRDEAY------------------YNDDEVYKGADGQYYNAQH--------NPV 157 Y + + Y D G Q + H PV Sbjct: 137 IEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAPV 196 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 + YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 197 RKTSTH-YFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L G W H IGKDI Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 313 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ +LK +DG + + Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +L+ + +I + + + RAL Q + L V+ Y D+ KPWEL K N Sbjct: 430 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 489 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + L +A Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 526 >gi|238757204|ref|ZP_04618391.1| Methionyl-tRNA synthetase [Yersinia aldovae ATCC 35236] gi|238704582|gb|EEP97112.1| Methionyl-tRNA synthetase [Yersinia aldovae ATCC 35236] Length = 650 Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 126/482 (26%), Positives = 214/482 (44%), Gaps = 44/482 (9%) Query: 27 EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADV 86 E I AD+ RF R+ G V F D HG I AQ G+ + + + S+ + Sbjct: 3 EHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQMGIEPEQMIAEMSQEHQQDFAG 62 Query: 87 LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG-- 144 ISYD++ T + + +++ ++ G I S Y ++ + D KG Sbjct: 63 FAISYDNYHSTHSDENRELSSLIYSRLKANGHIKNRTISQLYD-PEKGMFLPDRFVKGTC 121 Query: 145 ----ADGQY------YNAQHNPVQWM--------------EEEGYFFRLSAYQDKLLSYY 180 A QY A ++P + + E E +FF L A+ D L ++ Sbjct: 122 PKCKAPDQYGDNCEVCGATYSPTELINPQSAVSGATPVMRESEHFFFDLPAFSDMLQAWT 181 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 S L + N++ + +SGL+ ++R +G ++PD P YVW+DA Y+ Sbjct: 182 RSGA---LQEQVANKMQEWFESGLQQWDITRDAPYFGFEVPDAPGKYFYVWLDAPIGYMG 238 Query: 241 TTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 + L + G +FW D H IGKDI+ FH+++WPA L +N P VF H Sbjct: 239 SFKNLCDKRGDIDFDEFWREDSKTDLYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNVFVH 298 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNA 352 G++ G K+SKS G I ++ + D LRY+ +++ D + + +RVNA Sbjct: 299 GYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNA 358 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 D+ N + NL SR+ I K + G + A +D + + I + ++ + Sbjct: 359 DIVNKVVNLASRNAGFINKRFGGKL----ADQLADPVLYKTFTDAAVSIADAYTSRESSK 414 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470 A+ ++++L +RY D Q PW + K A + + + + R L L+ +P L Sbjct: 415 AIREIMALADVANRYVDEQAPWVVAKEEGRDADLQAICSMGINLFRVLMTYLKPVLPSLT 474 Query: 471 NK 472 + Sbjct: 475 ER 476 >gi|134301790|ref|YP_001121758.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] gi|187647721|sp|A4IXI6|SYM_FRATW RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|134049567|gb|ABO46638.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] Length = 674 Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 129/516 (25%), Positives = 237/516 (45%), Gaps = 49/516 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I +D+ RF +L G +F G+D HG I A++ Sbjct: 3 KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSL 62 Query: 66 GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + V + S R+ +D D +I++D++ T + + ++ K+++K I K Sbjct: 63 GITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161 + Y + + D V KG A+ QY A ++P + + Sbjct: 122 AQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI 180 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L A + + + ES+ +L E N++ + + GL+ +SR +G Sbjct: 181 QKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGF 238 Query: 219 KIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW-----PADL-HVIGKDILRF 270 IP + Q YVW+DA Y+ + Y + + + FW ++L H IGKDI+ F Sbjct: 239 AIPGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYF 298 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H ++WPA L S P VF++GF+ G+K+SKS G I ++ + LRY+ Sbjct: 299 HTLFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFA 358 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 + D + + + N+D+ + N+ SR I K +D + + F D Sbjct: 359 SRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF---DPE 414 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447 + S S+ I + + + A+ +++L + +++ D KPW+L K + V Sbjct: 415 LESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQV 474 Query: 448 LYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480 + + + L + L+ +P + A + +I F++ Sbjct: 475 CSQGINMFKVLIVYLKPIIPSIVAEAERFLNIQFIS 510 >gi|217973063|ref|YP_002357814.1| methionyl-tRNA synthetase [Shewanella baltica OS223] gi|254782872|sp|B8E958|SYM_SHEB2 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|217498198|gb|ACK46391.1| methionyl-tRNA synthetase [Shewanella baltica OS223] Length = 689 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 124/508 (24%), Positives = 238/508 (46%), Gaps = 49/508 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ +R+ +L G + + D HG I AQ Sbjct: 5 QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + + Q N + +D AD ++++D++ T + + ++ K+ D G I Sbjct: 65 QLGIAPEDMIAQVNKEHQQDFAD-FNVAFDNYHSTHSEENRLMASDIYLKLRDNGYIKSK 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160 S + +++ + D KG + QY A ++P + + Sbjct: 124 SISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDSCGATYSPTELINPKSAVSGAT 182 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + E +FF L A++ L + S L +E N++ + + GL+ ++R + Sbjct: 183 PVMKDTEHFFFDLPAFEGMLKEWTRSG---ALQVEMANKLDEWFEQGLQQWDITRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269 G +IPD P YVW+DA Y+ + L P+ S +FW D H IGKDI+ Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH+++WPA L + P V++HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +RVN+DL + NL SR+ I K +DG + + ++ Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKL------AKIND 413 Query: 389 SILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445 + L+ Q++ + +++ +A+ ++++L + + PW++ K + + A Sbjct: 414 TTLTEAFLAKQDVIADFYESREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAH 473 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473 V + + R L L+ +P+LA + Sbjct: 474 QVCSNALNLFRILVTYLKPVLPRLAQDV 501 >gi|56708349|ref|YP_170245.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670819|ref|YP_667376.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|224457475|ref|ZP_03665948.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|254370971|ref|ZP_04986974.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254875172|ref|ZP_05247882.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|68565962|sp|Q5NFE7|SYM_FRATT RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|122970891|sp|Q14GV0|SYM_FRAT1 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|56604841|emb|CAG45923.1| Methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110321152|emb|CAL09306.1| Methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|151569212|gb|EDN34866.1| hypothetical protein FTBG_01592 [Francisella tularensis subsp. tularensis FSC033] gi|254841171|gb|EET19607.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159964|gb|ADA79355.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis NE061598] Length = 674 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 129/516 (25%), Positives = 237/516 (45%), Gaps = 49/516 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I +D+ RF +L G +F G+D HG I A++ Sbjct: 3 KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSL 62 Query: 66 GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + V + S R+ +D D +I++D++ T + + ++ K+++K I K Sbjct: 63 GITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161 + Y + + D V KG A+ QY A ++P + + Sbjct: 122 AQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI 180 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L A + + + ES+ +L E N++ + + GL+ +SR +G Sbjct: 181 QKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGF 238 Query: 219 KIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW-----PADL-HVIGKDILRF 270 IP + Q YVW+DA Y+ + Y + + + FW ++L H IGKDI+ F Sbjct: 239 AIPGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYF 298 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H ++WPA L S P VF++GF+ G+K+SKS G I ++ + LRY+ Sbjct: 299 HTLFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFA 358 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 + D + + + N+D+ + N+ SR I K +D + + F D Sbjct: 359 SRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF---DPE 414 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447 + S S+ I + + + A+ +++L + +++ D KPW+L K + V Sbjct: 415 LESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQV 474 Query: 448 LYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480 + + + L + L+ +P + A + +I F++ Sbjct: 475 CSQGINMFKVLIVYLKPIIPSIVAEAERFLNIQFIS 510 >gi|325107887|ref|YP_004268955.1| methionyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305] gi|324968155|gb|ADY58933.1| methionyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305] Length = 680 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 136/513 (26%), Positives = 227/513 (44%), Gaps = 56/513 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N HIGH E + D+ RF +L G LF D HG I A+ Sbjct: 4 KILVTAALPYANGHIHIGHLVEYLQTDIWVRFQKLRGHRCLFFCADDTHGTAIMMRARKE 63 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G + +++ SR+ +D AD I +D++ T + + +WK + + G + Sbjct: 64 GRSETELIEEMSRSHQQDFAD-FGIEFDNYGSTDSEENKILGERIWKSLREAGLVETRDV 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 + Y ++ + D V GAD QY + E G + S ++ + Y Sbjct: 123 TQLYDPQEGTFLADRYVKGNCPKCGADDQYGDN-------CEVCGATYSPSELKNPVSVY 175 Query: 180 YESHPEF------ILPIER---------------RNEVISFVKS-----GLKDLSLSRKT 213 + PE + IE+ ++EV +++K L+D +SR Sbjct: 176 SGTTPEVRTAPHAFVNIEQLHDFLDDWTQSGKHLQSEVANYLKGHFLGEPLRDWDVSRPA 235 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268 +G +IPD P + YVW DA Y+ +T + + W AD H IGKDI Sbjct: 236 PYFGFEIPDMPGHYWYVWFDAPIGYIASTWQWCKRNNETLESWWADDSTEIHHFIGKDIT 295 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH ++WPA L +A L LP KV HGF+ GEK+SKS G I + + LRY+ Sbjct: 296 YFHTLFWPAMLKTAGLNLPTKVHIHGFLKVNGEKMSKSRGTFIQARTYLNNLDPAWLRYY 355 Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ D + +VNADL + N+ SR I T D Sbjct: 356 FATKLNSRLDDLDLNVQEFVDKVNADLVGKVVNIASRCAKFIGGQ------TLCETYPDD 409 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-- 445 + + + ++I + +N A+ +++ L ++Y + +PW+L+K +P++A Sbjct: 410 GGLFAKAAAAGEQIAAHYENCDYSPAMREIMQLAEAANKYVEDNQPWKLRK-DPEKAEEL 468 Query: 446 -TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V V + + RQ+ I L +P+LA + ++L Sbjct: 469 REVCTVALNLFRQVVIYLSPVLPRLAEQAGELL 501 >gi|254372434|ref|ZP_04987924.1| hypothetical protein FTCG_01659 [Francisella tularensis subsp. novicida GA99-3549] gi|151570162|gb|EDN35816.1| hypothetical protein FTCG_01659 [Francisella novicida GA99-3549] Length = 673 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 129/515 (25%), Positives = 235/515 (45%), Gaps = 48/515 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I +D+ RF +L G +F G+D HG I A++ Sbjct: 3 KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSL 62 Query: 66 GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + V + S R+ +D D +I++D++ T + + ++ K+++K I K Sbjct: 63 GITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161 + Y + + D V KG A+ QY A ++P + + Sbjct: 122 AQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI 180 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L A + + + ES+ +L E N++ + + GL+ +SR +G Sbjct: 181 QKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFQQGLQSWDISRDAPYFGF 238 Query: 219 KIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271 IP + Q YVW+DA Y+ + Y + + FW + H IGKDI+ FH Sbjct: 239 AIPGTNEQKFFYVWLDAPMGYIASFKDYCNRNEIDFDDFWGDNSESELYHFIGKDIIYFH 298 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 A++WPA L S P VF++GF+ G+K+SKS G I ++ + LRY+ Sbjct: 299 ALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFAS 358 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 + D + + + N+D+ + N+ SR + I K +D + + F D + Sbjct: 359 RLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAAFIYKKFDATL-SGEIF---DPEL 414 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVL 448 S S+ I + + + A+ +++L + +++ D KPW+L K + V Sbjct: 415 ESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVC 474 Query: 449 YVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480 + + + L L+ +P + A + +I F++ Sbjct: 475 SQGINMFKVLIAYLKPIIPSIVAEAERFLNIQFIS 509 >gi|160875690|ref|YP_001555006.1| methionyl-tRNA synthetase [Shewanella baltica OS195] gi|189083263|sp|A9L4F6|SYM_SHEB9 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|160861212|gb|ABX49746.1| methionyl-tRNA synthetase [Shewanella baltica OS195] gi|315267879|gb|ADT94732.1| methionyl-tRNA synthetase [Shewanella baltica OS678] Length = 689 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 124/508 (24%), Positives = 238/508 (46%), Gaps = 49/508 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ +R+ +L G + + D HG I AQ Sbjct: 5 QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + + Q N + +D AD ++++D++ T + + ++ K+ D G I Sbjct: 65 QLGIAPEDMIAQVNKEHQQDFAD-FNVAFDNYHSTHSEENRLMASDIYLKLRDNGYIKSK 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160 S + +++ + D KG + QY A ++P + + Sbjct: 124 SISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDSCGATYSPTELINPKSAVSGAT 182 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + E +FF L A++ L + S L +E N++ + + GL+ ++R + Sbjct: 183 PVMKDTEHFFFDLPAFEGMLKEWTRSG---ALQVEMANKLDEWFEQGLQQWDITRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269 G +IPD P YVW+DA Y+ + L P+ S +FW D H IGKDI+ Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH+++WPA L + P V++HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +RVN+DL + NL SR+ I K +DG + + ++ Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKL------AKIND 413 Query: 389 SILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445 + L+ Q++ + +++ +A+ ++++L + + PW++ K + + A Sbjct: 414 TTLTEAFLAKQDVIADFYESREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAH 473 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473 V + + R L L+ +P+LA + Sbjct: 474 QVCSNALNLFRILVTYLKPVLPRLAQDV 501 >gi|126174678|ref|YP_001050827.1| methionyl-tRNA synthetase [Shewanella baltica OS155] gi|187647770|sp|A3D5E5|SYM_SHEB5 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|125997883|gb|ABN61958.1| methionyl-tRNA synthetase [Shewanella baltica OS155] Length = 689 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 124/508 (24%), Positives = 238/508 (46%), Gaps = 49/508 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ +R+ +L G + + D HG I AQ Sbjct: 5 QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + + Q N + +D AD ++++D++ T + + ++ K+ D G I Sbjct: 65 QLGIAPEDMIAQVNKEHQQDFAD-FNVAFDNYHSTHSEENRLMASDIYLKLRDNGYIKSK 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160 S + +++ + D KG + QY A ++P + + Sbjct: 124 SISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDSCGATYSPTELINPKSAVSGAT 182 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + E +FF L A++ L + S L +E N++ + + GL+ ++R + Sbjct: 183 PVMKDTEHFFFDLPAFEGMLKEWTRSG---ALQVEMANKLDEWFEQGLQQWDITRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269 G +IPD P YVW+DA Y+ + L P+ S +FW D H IGKDI+ Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH+++WPA L + P V++HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +RVN+DL + NL SR+ I K +DG + + ++ Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKL------AKIND 413 Query: 389 SILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445 + L+ Q++ + +++ +A+ ++++L + + PW++ K + + A Sbjct: 414 TTLTEAFLAKQDVIADFYESREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAH 473 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473 V + + R L L+ +P+LA + Sbjct: 474 QVCSNALNLFRILVTYLKPVLPRLAQDV 501 >gi|300711986|ref|YP_003737800.1| methionyl-tRNA synthetase [Halalkalicoccus jeotgali B3] gi|299125669|gb|ADJ16008.1| methionyl-tRNA synthetase [Halalkalicoccus jeotgali B3] Length = 692 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 123/506 (24%), Positives = 225/506 (44%), Gaps = 53/506 (10%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N HIGH + D LAR R G F +G+D HG +A A+ G+T Sbjct: 14 VTCGLPYANGDLHIGHLRTYVSGDTLARSLRRLGQQTAFVSGSDMHGTPVAVNAEREGIT 73 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY-KGCYSGW 127 + F + + + + +D++ T ++ + + R ++ D G +Y K W Sbjct: 74 PEEFALEYHEEYAETFPEFGVEFDNYGHTHDETNTELTREFVREWIDNGHVYEKEIQVAW 133 Query: 128 YSLRDEAYYN---------------DDEVYKGADGQYYNAQ---------HNPVQWMEEE 163 D+ + DE +G + NP ++ E Sbjct: 134 DPEVDQPLPDRYVEGTCPYCGEKARGDECDEGCQRHLEPGEIEDPTSTLTGNPAEYRTRE 193 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIE----RRNEVISFVKSGLKDLSLSRKTFDWGIK 219 F RLS +Q+ L F+ +E +N+ +V+ L+DL ++R DWGI+ Sbjct: 194 HEFLRLSDFQEYLKG-------FLGRLEGTDNAKNQPKEWVEGELQDLCITRD-MDWGIE 245 Query: 220 IPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--------LHVIGKDILR 269 P++ + ++YVW+DA Y+ +T G + W +HVIG+DI++ Sbjct: 246 YPEEGKEDLVLYVWVDAPIEYVASTKQYTERVGEEVFDWAEPWKEGDGELIHVIGRDIIQ 305 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328 H ++WP+ L A+ P+ V + GF+ G+ S S I + + E D LRY+ Sbjct: 306 HHTVFWPSMLRGADYNEPRAVMASGFVNLDGKAFSTSRNRAIWADDYLAEGFDPDLLRYY 365 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 LV +D + + ++RVN +L GN V RS+ ++++G TP A + E Sbjct: 366 LVTTGGFQQDVDFSWERFQERVNGELVGNFGNFVYRSLLFAHRNFEG---TPSA--DVSE 420 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 + + + ++ R ++ + A I L + Y +PW+L +P+ A+ V+ Sbjct: 421 EVRTEINAAMEAFRRDLNEYSLREASQAGIRLSRFGNEYIQRNEPWKLVDEDPEEAARVI 480 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF 474 V++ + A+LL+ +P A +++ Sbjct: 481 RDCVQLAKAAAVLLEPILPHAAERLW 506 >gi|299066020|emb|CBJ37201.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) [Ralstonia solanacearum CMR15] Length = 688 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 145/537 (27%), Positives = 238/537 (44%), Gaps = 58/537 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ER ++ +++A+ Y N HIGH E I D+ RF R+ G + + D HG + Sbjct: 1 MSER-RILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHETYYVGADDTHGTPVML 59 Query: 61 AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +++ + + RD + L +S+D++ T + + C ++ K+ +K I Sbjct: 60 RAEKEGITPRQLIERVWTEHKRDFDNFL-VSFDNYYSTDSDENRELCERVYLKLKEKDLI 118 Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM-------- 160 +Y E + D E K GA QY A + P Sbjct: 119 DVREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSG 178 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210 E YFF+LS + ++ + E N++ ++ +S L D +S Sbjct: 179 ATPVRKSSEHYFFKLS--DPRCETFLRDWVGDLAQPEATNKMREWLGDEGESTLSDWDIS 236 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIG 264 R +G +IP P YVW+DA Y + L G W + H IG Sbjct: 237 RDAPYFGFEIPGTPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSPHSTTEQYHFIG 296 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 KDIL FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + Sbjct: 297 KDILYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPE 356 Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ ++ A +D + D RVN+DL N+ SRS ++K ++G + Sbjct: 357 WLRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRV----- 411 Query: 383 FTESDESILSVCSRVLQE----IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 +D ++ + L+E I + + + +AL V+ L V+ Y D +KPW+L K Sbjct: 412 ---NDAALANPLMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAYVDTEKPWDLAK 468 Query: 439 --TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493 DR V +E R LA+ L+ +P +I L V N ++++D +L Sbjct: 469 DEAQRDRLHAACSVALEAFRLLAVYLKPILPSTVARIEAFLNVEPLN--WRAIDAQL 523 >gi|169656526|ref|YP_001427901.2| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] gi|254368695|ref|ZP_04984709.1| hypothetical protein FTAG_01719 [Francisella tularensis subsp. holarctica FSC022] gi|187649783|sp|A7NAE2|SYM_FRATF RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|157121610|gb|EDO65787.1| hypothetical protein FTAG_01719 [Francisella tularensis subsp. holarctica FSC022] gi|164551594|gb|ABU60945.2| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 674 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 130/516 (25%), Positives = 237/516 (45%), Gaps = 49/516 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I +D+ RF +L G +F G+D HG I A++ Sbjct: 3 KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSL 62 Query: 66 GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + V + S R+ +D D +I++D++ T + + ++ K+++K I K Sbjct: 63 GITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161 + Y + + D V KG A+ QY A ++P + + Sbjct: 122 AQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI 180 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L A + + + ES+ +L E N++ + + GL+ +SR +G Sbjct: 181 QKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGF 238 Query: 219 KIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW-----PADL-HVIGKDILRF 270 IP + Q YVW+DA Y+ + Y + + + FW ++L H IGKDI+ F Sbjct: 239 AIPGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYF 298 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 HA++WPA L S P VF++GF+ G+K+SKS G I ++ + LRY+ Sbjct: 299 HALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFA 358 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 + D + + + N+D+ + N+ SR I K +D + + F D Sbjct: 359 SRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF---DPE 414 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447 + S S+ I + + + A+ +++L + +++ D KPW+L K + V Sbjct: 415 LESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQV 474 Query: 448 LYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480 + + + L L+ +P + A + +I F++ Sbjct: 475 CSQGINMFKVLIAYLKPIIPSIVAEAERFLNIQFIS 510 >gi|226944041|ref|YP_002799114.1| methionyl-tRNA synthetase [Azotobacter vinelandii DJ] gi|259511555|sp|C1DEF4|SYM_AZOVD RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|226718968|gb|ACO78139.1| methionyl-tRNA synthetase, class Ia [Azotobacter vinelandii DJ] Length = 681 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 125/516 (24%), Positives = 221/516 (42%), Gaps = 44/516 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E ++ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MPEARQILVTSALPYANGSIHLGHMLEYIQTDIWVRFQKQRGNQCVYVCADDAHGSAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + + + + D AD L + +D++ T + + ++ ++ D G I Sbjct: 61 RAEKEGITPEQLIAYVQAEHSADFADFL-VDFDNYHSTHAEENRALSEAIYLRLRDAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWMEEEG---- 164 + ++ + D + GA+ QY A + P + + Sbjct: 120 ATRSVTQYFDPEKGMFLADRFIKGTCPKCGAEDQYGDNCEKCGATYEPTELKDPRSAISG 179 Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 +FF+L ++ L + S L N++ ++ GL++ +SR Sbjct: 180 ATPVLKDSKHFFFKLPDFEAMLKEWTRSG---TLQEAVANKIAEWLDGGLQEWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267 +G +IPD+P YVW+DA Y+ + L P+ FW D H IGKDI Sbjct: 237 YFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWCKDSKAELYHFIGKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FH ++WPA L A P V HG++ G+K+SKS G I ++ + + LRY Sbjct: 297 VNFHTLFWPAMLEGAGFRKPTAVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLRY 356 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + +++ G D + + ++VN+DL + N+ SR I K G++ E Sbjct: 357 YYASKLSRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGLMVDANPEPEL 416 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 E+ I E + + RA+ ++++L + + + PW L K + Sbjct: 417 WEAFQVAAP----AIAEAYEGRDFGRAMREIMALADRANAWIADKAPWALNKQEGKQTEV 472 Query: 447 --VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 + + + RQL I L+ +P LA L VA Sbjct: 473 QEICAFGINLFRQLVIFLKPVLPNLATAAEAFLNVA 508 >gi|94676991|ref|YP_588839.1| methionyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|122988114|sp|Q1LT75|SYM_BAUCH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|94220141|gb|ABF14300.1| methionyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 547 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 131/502 (26%), Positives = 218/502 (43%), Gaps = 44/502 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K+ ++ A+ Y N H+GH E I AD+ R+ R+ G V F D HG I A+ Sbjct: 6 SKILVTCALPYANGSLHLGHMLEHIQADIWVRYQRIRGKQVYFICADDAHGTPIMLKAKQ 65 Query: 65 AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 +G+T + +++ N + D+A +ISYD++ T + + ++ + + G I K Sbjct: 66 SGITPEAMINKINQEHQTDLAQ-FEISYDNYYSTHSDENRELVISIYNTLKENGLIKKRM 124 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG-------- 164 S Y + D V G + + A ++P ++ + Sbjct: 125 ISQLYDPIHNIFLPDRFVKGYCPRCKLPDQYGDNCEICGATYHPTDLIDPKSTLSGVTPV 184 Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 FF L + + L ++ S L + N++ + GL+ +SR +G Sbjct: 185 ISKSKHLFFDLPVFSEVLRAWTRSGA---LQEQVANKMQEWFDMGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFW----PADL-HVIGKDILRFH 271 ++PD P YVW+DA Y+ L N D +FW ADL H IGKDI FH Sbjct: 242 EVPDTPGKYFYVWLDAPIGYIGAFKNLCNKRNDIIFDEFWHLSSKADLYHFIGKDITYFH 301 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 I+WPA L + L P +F HG++ G K+SKS G +I + + LRY+ Sbjct: 302 GIFWPAILEGSKLRKPTNLFVHGYVTINGAKMSKSRGTLIKASTYLAHLDASYLRYYYAT 361 Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +++ D + + RVNAD+ N + NL +R+ S I K +D + T D+ + Sbjct: 362 KLSSDINDIDLNFNDFVNRVNADIINKVINLAARNASFIQKYFDNKLSA----TIEDQYL 417 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448 I E N+ RA+ +++ L + Y ++PW + K + Sbjct: 418 YDYFVTASVSIGEAFNNRETSRAIREIMILADRANVYIHKKEPWVVAKNKYYQQDLHNIC 477 Query: 449 YVTVEVIRQLAILLQAFVPKLA 470 + + + R L LQ +P LA Sbjct: 478 SMGINLFRLLMTYLQPVLPNLA 499 >gi|15921721|ref|NP_377390.1| methionyl-tRNA synthetase [Sulfolobus tokodaii str. 7] gi|25009384|sp|Q971C1|SYM_SULTO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|15622508|dbj|BAB66499.1| 571aa long hypothetical methionyl-tRNA synthetase [Sulfolobus tokodaii str. 7] Length = 571 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 142/522 (27%), Positives = 248/522 (47%), Gaps = 49/522 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAA 62 K+++++A Y NA PH+G+ ++ ADV AR+ RL +V+F +G+DEHG I A Sbjct: 2 KIFVASAWPYVNAVPHLGNLIGSVLSADVFARYARLKYGQENVVFVSGSDEHGTPIEVEA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRTTEKRHHDTCR----ILWKKISDKG 117 + V K DQ + + DV +ISY+++ RT + H R L K I + Sbjct: 62 KKRNVNPKELTDQAHEYDKKLFLDVWEISYNNYTRTESEIHKTFVRDFMLKLEKYIKIEE 121 Query: 118 DIYKGC-----------------YSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPV 157 D C Y G+ R + N + + + PV Sbjct: 122 DEIPYCEYDKIYLPDRFVKGTCPYCGFEDARGDQCDNCGRLLTPRLLVNPKCVLCGRTPV 181 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + + + +FF LSA+ DK+ + ++ LP ++ +S+VK GLK S++R WG Sbjct: 182 -FKKTKHWFFDLSAFNDKIEEWIKNSQ--TLPENVKSVALSWVKEGLKPRSITRDN-AWG 237 Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD----LHVIGKDIL 268 I P + +YVW +AL Y++ T G + KFW + + IGKD + Sbjct: 238 IPAPFEGAEGKTIYVWFEALLGYISATIEYFKKIGKEEEWKKFWFGNDVKSYYFIGKDNI 297 Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDA 324 FHA+ PA L+++ N LP + + ++L++G+K SKS +G ID E + + ++ Sbjct: 298 PFHAVILPAMLMASGENYVLPTVIAATEYLLYEGQKFSKSRKIGVWID--EAPQLLDIEY 355 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--A 382 R+ L+R +D + + VN +L + IGN +R +SM+ + ++G +P Sbjct: 356 WRFILIRLRPEERDTNFTWREALRIVNTELNDDIGNYANRVLSMVRRYFNGEVPQIKYEK 415 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 + D +S +++ E + + +++ L + Y + + PW L K + + Sbjct: 416 LKDEDTKFISEIKEAPKKMSELFELGKLKAGSEEILKLARNGNSYLNIRAPWNLIKNDKE 475 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 A VL + V +R L+I+L +PK A K++++L D R Sbjct: 476 EAGNVLNIAVNSLRTLSIMLYPLMPKSAEKLYNMLGFKDIER 517 >gi|255011397|ref|ZP_05283523.1| methionyl-tRNA synthetase [Bacteroides fragilis 3_1_12] gi|313149211|ref|ZP_07811404.1| methionyl-tRNA synthetase [Bacteroides fragilis 3_1_12] gi|313137978|gb|EFR55338.1| methionyl-tRNA synthetase [Bacteroides fragilis 3_1_12] Length = 679 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 136/504 (26%), Positives = 236/504 (46%), Gaps = 45/504 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K ++ +++A+ Y N HIGH A + AD+ R+ RL +VLF G+DEHG I Sbjct: 3 KNFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKENVLFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + IS+D + RT+ K HH+ +K + +KG+ Sbjct: 63 RAKKEGITPQDVVDRYHFLIKKSFEEFGISFDVYSRTSSKTHHELASDFFKTLYEKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + D + + ++G Y + + Sbjct: 123 EKTSEQYYDEEAHQFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 PV E + ++ L ++ L + E H E+ + + S++ GL+ ++SR Sbjct: 183 KPVM-KETKHWYLPLDKHETWLRQWILEDHKEWRPNV--YGQCKSWLDMGLQPRAVSRD- 238 Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKD 266 DWGI +P + ++YVW DA Y++ T L PD + W D +H IGKD Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLVHFIGKD 295 Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVD 323 + FH I +PA L + + LP V S+ F+ +G+KIS S + E +E+ D Sbjct: 296 NIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPGKQD 355 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 LRY L KD + + R N +L GN V+R++ + K ++G +P G Sbjct: 356 VLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFEGKVPAAGEL 415 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 T+ D+ L S V E+ + + A + ++L ++Y +PW+L KT+ +R Sbjct: 416 TDYDKETLKEFSDVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMER 475 Query: 444 ASTVLYVTVEVIRQLAILLQAFVP 467 T+L ++++++ LAI + F+P Sbjct: 476 VGTILNISLQLVANLAIAFEPFLP 499 >gi|167580180|ref|ZP_02373054.1| methionyl-tRNA synthetase [Burkholderia thailandensis TXDOH] Length = 709 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 140/546 (25%), Positives = 235/546 (43%), Gaps = 61/546 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ AR R+ G ++ + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWARTMRMHGHEIYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 77 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAERE 136 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161 Y + + D KG A QY ++ NP + Sbjct: 137 IEQAYDPVKQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPYSVVSGATP 195 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 +FFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 196 VRKTSTHHFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 253 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIGKDI 267 +G +IP P YVW+DA Y + L G W + H IGKDI Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWISKDSTTEQYHFIGKDI 313 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDAGLNPEWLR 373 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ ++K +DG + + Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQA----SA 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 ++ +L + +I + + + RAL Q + L V+ Y D KPWEL K N Sbjct: 430 TNHPLLVTLRDAIPQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWELAKDPANAVA 489 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADEN---------RCFQSL 489 V++E R L++ L+ +P++A + L + AD N R +Q L Sbjct: 490 LHETCTVSLEAFRLLSLALKPVLPRVAEGVEAFLGIAPLTWADANKPLSSEQPIRAYQHL 549 Query: 490 DQRLKP 495 R+ P Sbjct: 550 MTRVDP 555 >gi|255016634|ref|ZP_05288760.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL F2-515] Length = 185 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 78/182 (42%), Positives = 119/182 (65%), Gaps = 6/182 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 3 EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD+ + F+++ L+IS DFIRTT+ RH + ++K++ ++GDIY Sbjct: 63 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFKQLLEQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175 G Y GWYS+ DE Y+ + +EVYK +G+ + N V+ ++EE YFFR+S Y D+ Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182 Query: 176 LL 177 L+ Sbjct: 183 LV 184 >gi|229169755|ref|ZP_04297455.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH621] gi|228613794|gb|EEK70919.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH621] Length = 544 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 126/508 (24%), Positives = 230/508 (45%), Gaps = 47/508 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G VL+ +G+D +G I A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEHVLYVSGSDCNGTPITIRAKQDG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 V K D+ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 63 VMVKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218 E ++F L +Q ++ E + R+ I ++K GL+D ++SR G+ Sbjct: 183 EHFYFALHKFQQQIKEAVEIAKQ---KGTWRDNAIQLTERYLKEGLQDRAVSRD-LPIGV 238 Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRF 270 IP +D + +YVWI+A+T Y + + + G +FW + +V GKD + F Sbjct: 239 PIPVAGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDKEAKTYYVHGKDNIPF 296 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 H+I WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 297 HSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFL 356 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +D + N++L GN V+R++ I K Y G +P E + Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGTVPKGSIDVELKDK 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 + + + + E ++ AL + V ++YFD ++PW+ ++ +P +Y Sbjct: 417 V----EGLYKSVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIY 472 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477 V +I A LL+ F+P + ++ + L Sbjct: 473 NCVYLIANFAQLLEPFLPFSSERVRNTL 500 >gi|83814986|ref|YP_445678.1| methionyl-tRNA synthetase [Salinibacter ruber DSM 13855] gi|123753405|sp|Q2S2A3|SYM_SALRD RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|83756380|gb|ABC44493.1| methionyl-tRNA synthetase [Salinibacter ruber DSM 13855] Length = 713 Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 130/521 (24%), Positives = 232/521 (44%), Gaps = 59/521 (11%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E+L ++ A+ Y N HIGH A + AD+ R+ RL G DV F G+DE G I A Sbjct: 8 ERLLVTAALPYANGPIHIGHLAGAYLPADLFVRYQRLKGEDVAFICGSDEMGVAILMRAI 67 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 T + +D RD + +S+D + RT+ + H +T + ++ + + G Sbjct: 68 REDRTPEDIIDTYHPQIRDNFERFGMSFDYYGRTSSETHTETTQDFFRVLDENGGFDLKT 127 Query: 124 YSGWYSLRDEAYYND-----------------DEVYKGADGQYYNAQHNP--------VQ 158 Y E + D D+ + NP + Sbjct: 128 DEQLYDPEAEMFLADRFVIGTCPVCGFEEAYGDQCEQCGSSLSPTELENPQSTLTDATPE 187 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLSRKTF 214 + E ++ L Q +L + SHPE+ +N V+ ++S GLK +++R Sbjct: 188 FKETTHWYLPLGELQPQLEEWIGSHPEW------KNNVVGQIQSWFDEGLKGRAITRDVL 241 Query: 215 DWGIKIPDD---------PQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD--- 259 WG+ +PDD ++YVW DA Y++ T G +W + Sbjct: 242 -WGVPVPDDVAERHGLEAEGKVIYVWFDAPIGYISATKEWAAEQGEPDAWTDYWQDEDTR 300 Query: 260 -LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 +H IGKD + FH + +P+ L+ + LP V ++ F+ +GEK+S S G + E + Sbjct: 301 LVHFIGKDNIVFHCLMFPSMLMEHGDYVLPDNVPANEFLNLEGEKLSTSRGWAVWLHEYL 360 Query: 318 EEVG-----VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 ++ D LRY L + KD + +G ++RVN +LAN GN V R+++ + Sbjct: 361 DDFADERHAPDLLRYALATTLPETKDADFSWEGFQQRVNGELANVFGNFVHRTLTFAQRY 420 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 +DG +P +E+D +L + V + + A+ + ++L ++YF+ + Sbjct: 421 FDGTVPPLEDPSEADRVMLDRMAEVPDTVGAAYEEHRTRDAVFETMALARRGNKYFNDTE 480 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 PW +++P + ++V+++V L+IL + +P A + Sbjct: 481 PWHTHESDPQACANTIHVSLQVCAALSILFEPVLPSAAATL 521 >gi|283777954|ref|YP_003368709.1| methionyl-tRNA synthetase [Pirellula staleyi DSM 6068] gi|283436407|gb|ADB14849.1| methionyl-tRNA synthetase [Pirellula staleyi DSM 6068] Length = 696 Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 131/515 (25%), Positives = 213/515 (41%), Gaps = 72/515 (13%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +++ ++ A+ Y N HIGH E I D+ RF +L G +F D HG I A+ Sbjct: 3 KRILVTAALPYANGPIHIGHLVEYIQTDIWVRFQKLRGERCIFLCADDTHGTAIMIRAKA 62 Query: 65 AGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK-- 121 G T + + + ++ + RD A I +D++ T + C +W + +KG I + Sbjct: 63 EGRTEEALIAEMSAAHQRDFAG-FQIEFDNYGSTNSPENRLLCHQIWGSLREKGLIVEKD 121 Query: 122 ---------------------------------GCYSGWYSLRDEAYYNDDEVYKGADGQ 148 C + N GA + Sbjct: 122 VSQLFDPVAGTFLADRFVKGNCPKCGSPDQYGDNCDKCGSTYTPAELVNPKSTLSGATPE 181 Query: 149 YYNAQHNPVQWMEEEGYFFRLSA----YQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204 +A H VQ + G+ + QD++ +Y + H F+ L Sbjct: 182 VRSAPHLFVQLEKLHGFLNEWTQNGKHLQDEVANYLKGH---------------FLGEEL 226 Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---- 260 +D +SR +G +IPD P YVW DA Y+ +T +G + W + Sbjct: 227 RDWDVSRPAPYFGFEIPDSPGNYWYVWFDAPIGYIASTLEWCKRNGEELDTWWKNPETEI 286 Query: 261 -HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 H IGKDI FH ++WP L SA L LP KV HGF+ GEK+SKS G + ++ Sbjct: 287 HHFIGKDITYFHTLFWPGMLKSAELNLPTKVHIHGFLTVDGEKMSKSKGTFVKAETFLKH 346 Query: 320 VGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 + ALRYF ++ D + D ++N+DL + NL SR+ + G+ Sbjct: 347 LDPAALRYFYASKLGPRLDDLDLNVDEFTAKINSDLVGKVVNLASRTSKFV--QTSGL-- 402 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 A D + + +EI + Q+ RA+ ++ L + + + + PW+L K Sbjct: 403 --SAVYPDDGGLFDRAALAGKEIADAYQHCDYARAMRLIMELADRANPFIEERAPWKLAK 460 Query: 439 TNPDRAST---VLYVTVEVIRQLAILLQAFVPKLA 470 +P A + V + + RQ+A+ L +PKLA Sbjct: 461 -DPAAAQQLQDICSVGLNLFRQIAVYLAPVLPKLA 494 >gi|115314340|ref|YP_763063.1| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica OSU18] gi|122325627|sp|Q0BNA8|SYM_FRATO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|115129239|gb|ABI82426.1| methionine--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] Length = 674 Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 130/516 (25%), Positives = 237/516 (45%), Gaps = 49/516 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I +D+ RF +L G +F G+D HG I A++ Sbjct: 3 KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFICGSDTHGTPIMLKAKSL 62 Query: 66 GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + V + S R+ +D D +I++D++ T + + ++ K+++K I K Sbjct: 63 GITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161 + Y + + D V KG A+ QY A ++P + + Sbjct: 122 AQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI 180 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L A + + + ES+ +L E N++ + + GL+ +SR +G Sbjct: 181 QKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGF 238 Query: 219 KIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW-----PADL-HVIGKDILRF 270 IP + Q YVW+DA Y+ + Y + + + FW ++L H IGKDI+ F Sbjct: 239 AIPGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYF 298 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 HA++WPA L S P VF++GF+ G+K+SKS G I ++ + LRY+ Sbjct: 299 HALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFA 358 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 + D + + + N+D+ + N+ SR I K +D + + F D Sbjct: 359 SRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF---DPE 414 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447 + S S+ I + + + A+ +++L + +++ D KPW+L K + V Sbjct: 415 LESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQV 474 Query: 448 LYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480 + + + L L+ +P + A + +I F++ Sbjct: 475 CSQGINMFKVLIAYLKPIIPSIVAEAERFLNIQFIS 510 >gi|304409055|ref|ZP_07390676.1| methionyl-tRNA synthetase [Shewanella baltica OS183] gi|307303058|ref|ZP_07582813.1| methionyl-tRNA synthetase [Shewanella baltica BA175] gi|304352876|gb|EFM17273.1| methionyl-tRNA synthetase [Shewanella baltica OS183] gi|306913418|gb|EFN43840.1| methionyl-tRNA synthetase [Shewanella baltica BA175] Length = 689 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 128/507 (25%), Positives = 237/507 (46%), Gaps = 47/507 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ +R+ +L G + + D HG I AQ Sbjct: 5 QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + + Q N + +D AD ++++D++ T + + ++ K+ D G I Sbjct: 65 QLGIAPEDMIAQVNKEHQQDFAD-FNVAFDNYHSTHSEENRLMASDIYLKLRDNGYIKSK 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160 S + +++ + D KG + QY A ++P + + Sbjct: 124 SISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDSCGATYSPTELINPKSAVSGAT 182 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + E +FF L A++ L + S L +E N++ + + GL+ ++R + Sbjct: 183 PVMKDTEHFFFDLPAFEGMLKEWTRSG---ALQVEMANKLDEWFEQGLQQWDITRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269 G +IPD P YVW+DA Y+ + L P+ S +FW D H IGKDI+ Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH+++WPA L + P V++HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +RVN+DL + NL SR+ I K +DG + A T E Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKI-ADTTLTE 418 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446 + L+ V+ + E+ + +A+ ++++L + + PW++ K + + A Sbjct: 419 AFLAK-QDVIADFYESRE---YGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAHQ 474 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKI 473 V + + R L L+ +P+LA + Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLAQDV 501 >gi|260173039|ref|ZP_05759451.1| methionyl-tRNA synthetase [Bacteroides sp. D2] gi|315921317|ref|ZP_07917557.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695192|gb|EFS32027.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 679 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 140/517 (27%), Positives = 240/517 (46%), Gaps = 51/517 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ +++A+ Y N HIGH A + AD+ R+ RL DVLF G+DEHG I Sbjct: 3 KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + IS+D + RTT HH +K + +KG+ Sbjct: 63 RAKKEGITPQDVVDRYHSLIKKSFAEFGISFDVYSRTTSPTHHQLASDFFKTLYNKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154 + +Y + + D + + ++G Y + + Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210 PV E + ++ L ++ L + E H E+ R N + S++ GL+ ++S Sbjct: 183 KPVM-KETKHWYLPLDKHEAWLRKWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236 Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263 R DWGI +P + ++YVW DA Y++ T L PD + W D +H I Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFI 292 Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320 GKD + FH I +PA L + + LP V S+ F+ +G+KIS S + E + + Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPG 352 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D LRY L KD + + R N +L GN V+R++ + K +DG +P Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGRVPAQ 412 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 G+ T+ D+ L + V E+ + + A + ++L ++Y +PW+L KT+ Sbjct: 413 GSLTDYDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTD 472 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +R T+L ++++++ LAI F+P + K+ +L Sbjct: 473 MERVGTILNISLQLVANLAIAFDPFLPFSSEKLRKML 509 >gi|78067237|ref|YP_370006.1| methionyl-tRNA synthetase [Burkholderia sp. 383] gi|123728935|sp|Q39DV4|SYM_BURS3 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|77967982|gb|ABB09362.1| methionyl-tRNA synthetase [Burkholderia sp. 383] Length = 720 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 132/514 (25%), Positives = 225/514 (43%), Gaps = 45/514 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG I A+ Sbjct: 19 QILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLRAEKE 78 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T K +D+ + D +S+D+F T + ++ + D G I + Sbjct: 79 GLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSEKIYVALQDAGFIAEREIE 138 Query: 126 GWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME------------- 161 Y E + D E K G + + + + P + + Sbjct: 139 QAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPYSVVSGATPVRK 198 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTFDW 216 + YFFRLS + ++ + E N++ ++ ++ L D +SR + Sbjct: 199 TSKHYFFRLS--DPRCETFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDAPYF 256 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADL----HVIGKDILRF 270 G +IP P YVW+DA Y + L + +G W P H IGKDIL F Sbjct: 257 GFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRNGVDFDAWVRPGSTTEQYHFIGKDILYF 316 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFL 329 H ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LRY+ Sbjct: 317 HTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYYF 376 Query: 330 VREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 ++ A +D + D + RVN+DL N+ SR+ ++K +DG + + + Sbjct: 377 AAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAMNH 432 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446 +++ + +I + + + RAL + L EV+ Y D KPW+L K N Sbjct: 433 PLVAKLREAIPQIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWDLAKDPANAVALHE 492 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++A + +A Sbjct: 493 TCSVSLESFRLLSLALKPVMPRVAEAVESFFGIA 526 >gi|209522384|ref|ZP_03270997.1| methionyl-tRNA synthetase [Burkholderia sp. H160] gi|209497181|gb|EDZ97423.1| methionyl-tRNA synthetase [Burkholderia sp. H160] Length = 711 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 142/522 (27%), Positives = 228/522 (43%), Gaps = 59/522 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG + A+ Sbjct: 16 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYVGADDTHGTPVMLRAE 75 Query: 64 NAGVTTKVFVD----QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 G+T K +D ++ R+F D IS+D++ T + ++ + + G I Sbjct: 76 QEGLTPKQLIDRVWLEHKRDF----DNFGISFDNYYSTDSDENRVLSENVYLALKEAGLI 131 Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME- 161 Y E + D E K GA QY ++ NP + Sbjct: 132 DAREIEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYLPTELVNPYSVVSG 191 Query: 162 -------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210 YFFRLS + ++ + + E N++ ++ ++ L D +S Sbjct: 192 ATPIRKTSTHYFFRLS--DPRCENFLRAWVGGLAQPEATNKMREWLGDAGEAKLADWDIS 249 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIG 264 R +G +IP P YVW+DA Y + L G W H IG Sbjct: 250 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAEKRGLDFDAWVRKGSTAEQYHFIG 309 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 KDIL FH ++WPA L + P VF+HGF+ G K+SKS G I VI+ + + Sbjct: 310 KDILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIDTGLNPE 369 Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ ++ + +D + D + RVN+DL N+ SR+ ++K +DG + Sbjct: 370 WLRYYFAAKLNSTMEDLDLNLDDFQARVNSDLIGKYVNIASRAAGFLIKRFDGRVQD--- 426 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 + +L L +I + + + RAL Q + L V+ Y D KPW+ K D Sbjct: 427 -SAMHHPLLGTLRSALPQIAAHYEAREYSRALRQTMELADAVNAYVDTAKPWDQAK---D 482 Query: 443 RASTV-----LYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 A++V V+VE R L++ L+ +PKLA + L + Sbjct: 483 PANSVALHETCSVSVEAFRLLSLALKPVLPKLAEAVEAFLAI 524 >gi|167618283|ref|ZP_02386914.1| methionyl-tRNA synthetase [Burkholderia thailandensis Bt4] Length = 710 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 140/546 (25%), Positives = 235/546 (43%), Gaps = 61/546 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ AR R+ G ++ + D HG + A+ Sbjct: 9 RRQILVTSALPYANGQIHIGHLVEYIQTDIWARTMRMHGHEIYYIGADDTHGTPVMLRAE 68 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 69 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAERE 128 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161 Y + + D KG A QY ++ NP + Sbjct: 129 IEQAYDPVKQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPYSVVSGATP 187 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 +FFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 188 VRKTSTHHFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 245 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIGKDI 267 +G +IP P YVW+DA Y + L G W + H IGKDI Sbjct: 246 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWISKDSTTEQYHFIGKDI 305 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 306 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDAGLNPEWLR 365 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ ++K +DG + + Sbjct: 366 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQA----SA 421 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 ++ +L + +I + + + RAL Q + L V+ Y D KPWEL K N Sbjct: 422 TNHPLLVTLRDAIPQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWELAKDPANAVA 481 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADEN---------RCFQSL 489 V++E R L++ L+ +P++A + L + AD N R +Q L Sbjct: 482 LHETCTVSLEAFRLLSLALKPVLPRVAEGVEAFLGIAPLTWADANKPLSSEQPIRAYQHL 541 Query: 490 DQRLKP 495 R+ P Sbjct: 542 MTRVDP 547 >gi|187649792|sp|Q2T087|SYM_BURTA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS Length = 718 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 140/546 (25%), Positives = 235/546 (43%), Gaps = 61/546 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ AR R+ G ++ + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWARTMRMHGHEIYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 77 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAERE 136 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161 Y + + D KG A QY ++ NP + Sbjct: 137 IEQAYDPVKQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPYSVVSGATP 195 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 +FFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 196 VRKTSTHHFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 253 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIGKDI 267 +G +IP P YVW+DA Y + L G W + H IGKDI Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWISKDSTTEQYHFIGKDI 313 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDAGLNPEWLR 373 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ ++K +DG + + Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQA----SA 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 ++ +L + +I + + + RAL Q + L V+ Y D KPWEL K N Sbjct: 430 TNHPLLVTLRDAIPQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWELAKDPANAVA 489 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADEN---------RCFQSL 489 V++E R L++ L+ +P++A + L + AD N R +Q L Sbjct: 490 LHETCTVSLEAFRLLSLALKPVLPRVAEGVEAFLGIAPLTWADANKPLSSEQPIRAYQHL 549 Query: 490 DQRLKP 495 R+ P Sbjct: 550 MTRVDP 555 >gi|258544167|ref|ZP_05704401.1| methionine--tRNA ligase [Cardiobacterium hominis ATCC 15826] gi|258520609|gb|EEV89468.1| methionine--tRNA ligase [Cardiobacterium hominis ATCC 15826] Length = 675 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 128/503 (25%), Positives = 219/503 (43%), Gaps = 43/503 (8%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ ++ +++A+ Y N H+GH E I D+ RF RL G + + D HG I + Sbjct: 5 KKRRILVTSALPYANGAIHLGHMVEYIQTDIWVRFQRLRGHECHYVCADDAHGTPIMLRS 64 Query: 63 QNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + G+T + +D++ S + RD L I + + T + +++ + + G I + Sbjct: 65 EKEGITPQQLIDKSHSEHLRDFRGFL-IDHHQYHSTHSAENRALTAAIYRALDNGGHILR 123 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----------------NPVQWM---- 160 S + + + D V + Q+ NP + Sbjct: 124 RTISQLFDPEKQLFLPDRFVKGECPKCHSKDQYGDNCEVCGTTYAPTDLINPYSALSGAT 183 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + E YFF L A+ L + +S L RN++ + GL+ +SR W Sbjct: 184 PVERDSEHYFFDLPAFDAFLRDWLQSAQ---LQESMRNKLGEWFVEGLQPWDISRDAPYW 240 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270 G +IPD P YVW+DA Y+ D + FW H IGKDI F Sbjct: 241 GFEIPDAPGKYFYVWLDAPIGYMGAFRALCDRENLDFDAFWREGHDTELYHFIGKDIAYF 300 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H ++WPA L A P V HGF+ GEK+SKS G I ++ + + LRY+ Sbjct: 301 HMLFWPAMLKGAGYRQPSGVNCHGFLTVNGEKMSKSRGTFIKAETYLKHLRPEYLRYYFA 360 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ +D + D +++VN+DL + NL SR I K +DG + A D++ Sbjct: 361 SKLSARVEDLDLNLDDFRQKVNSDLVGKLVNLASRCAPFISKHFDGAL----AAALPDDA 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--V 447 + + + ++ + + A+ ++ L + Y DA+KPW K + RA+ + Sbjct: 417 LFNQFAAKADDLASAYEQREYSSAIRDIMKLADAANEYIDAEKPWVKIKDDASRAAVQGI 476 Query: 448 LYVTVEVIRQLAILLQAFVPKLA 470 V + RQL L+ +P++A Sbjct: 477 ATVGINAFRQLITYLKPVLPQVA 499 >gi|312959251|ref|ZP_07773769.1| Methionyl-tRNA synthetase [Pseudomonas fluorescens WH6] gi|311286511|gb|EFQ65074.1| Methionyl-tRNA synthetase [Pseudomonas fluorescens WH6] Length = 683 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 122/506 (24%), Positives = 223/506 (44%), Gaps = 44/506 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E K+ +++A+ Y N H+GH E I D+ RF + G ++ D HG I Sbjct: 1 MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60 Query: 61 AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T ++ + + + D A+ L + +D+F T + + + ++ ++ + G I Sbjct: 61 RAEKEGITPEQLIANVQAEHSADFAEFL-VDFDNFHSTHCEENRELSSQIYLRLKEAGHI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQ---------- 158 + + ++ + + D + G + QY A + P Sbjct: 120 DQRSVTQYFDPEKKMFLADRFIKGTCPKCGTEDQYGDNCEKCGATYAPTDLKDPKSAISG 179 Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + + +FF+L +Q L ++ S L N++ ++ SGL+ +SR Sbjct: 180 ATPVLKDSQHFFFKLPDFQQMLQTWTRSG---TLQDAVANKLSEWLDSGLQQWDISRDAP 236 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267 +G +IP +P YVW+DA Y+ + L P+ FW D H IGKDI Sbjct: 237 YFGFEIPGEPGKFFYVWLDAPIGYMASFKNLCDRTPELDFDAFWGKDSTAELYHFIGKDI 296 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA + P + HG++ G+K+SKS G I ++ + + LRY Sbjct: 297 VNFHALFWPAMREGSGYRKPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLAPEYLRY 356 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ G D + + ++VN+DL + N+ SR I K G++ A E Sbjct: 357 YYASKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVAENAAPEL 416 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-- 444 ++ L+ I + + + RA+ +++ L + + + PW L K +A Sbjct: 417 TDAFLAAAP----SIADAYEARDFARAMREIMGLADRANAWIADKAPWSLNKQEGKQAEV 472 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLA 470 + V + RQL I L+ +P LA Sbjct: 473 QAICATGVNLFRQLVIFLKPVLPLLA 498 >gi|326796149|ref|YP_004313969.1| Methionyl-tRNA synthetase [Marinomonas mediterranea MMB-1] gi|326546913|gb|ADZ92133.1| Methionyl-tRNA synthetase [Marinomonas mediterranea MMB-1] Length = 683 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 131/507 (25%), Positives = 226/507 (44%), Gaps = 50/507 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + + K+ +++A+ Y N H+GH E I D+ RF +L G D HG I Sbjct: 3 QTQRKILVTSALPYANGPIHLGHMLEHIQTDIWVRFQKLRGHVCNAVCADDAHGTAIMIR 62 Query: 62 AQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + +D + + +D D L I YD++ T + + +++ + D G I Sbjct: 63 AEQNGITPEELIDGVRAEHMKDFNDFL-IGYDNYHSTHSSENQELSSSIYQALRDNGKIS 121 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM-------- 160 + Y ++ + D KG A+ QY +A + P++ + Sbjct: 122 VRSITQAYD-PEKGMFLADRFVKGTCPKCKAEDQYGDNCEVCSATYTPMEMINPRSVYSG 180 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + YFF+L +Q+ L + S L + N++ ++ SGL++ +SR Sbjct: 181 ATPIEKSSDHYFFKLPEFQEFLQKWTRSG---TLQTQVANKLSEWLDSGLQEWDISRDAP 237 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-AKFWPADL-----HVIGKDI 267 +G +IPD P YVW+DA Y+ + +L D +G +W D H IGKDI Sbjct: 238 YFGFEIPDAPGKYFYVWLDAPIGYMASFKHLCDRTEGLNFDDYWAKDADSELYHFIGKDI 297 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FHA++WPA L A P V HG++ G K+SKS G I + + LRY Sbjct: 298 VNFHALFWPAMLDCAGYRTPTGVNVHGYVTVNGTKMSKSRGTFIMARTYLNHLDPQYLRY 357 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + ++ D + + +RVN+D+ + N+ SR+ S I K +D + T A + Sbjct: 358 YYAAKLNSSVDDIDLNLEDFVQRVNSDVVGKVVNIASRTASFINKKFDSQLATDVAENDM 417 Query: 387 DESILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-- 442 + ++ + + E RE +A+ + + L + Y Q PW L K+ Sbjct: 418 IQDFINAGDTIAEFYETRE------YGKAIRETMRLADIANTYIADQAPWVLAKSEDTLP 471 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKL 469 + V V++ + LA L+ +P L Sbjct: 472 KVQEVCSVSLNLFAILATYLKPVLPTL 498 >gi|187649778|sp|A0Q556|SYM_FRATN RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS Length = 673 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 129/515 (25%), Positives = 234/515 (45%), Gaps = 48/515 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I +D+ RF +L G +F G+D HG I A++ Sbjct: 3 KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSL 62 Query: 66 GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + V + S R+ +D D +I++D++ T + + ++ K+++K I K Sbjct: 63 GITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161 + Y + + D V KG A+ QY A ++P + + Sbjct: 122 AQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI 180 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L A + + + ES+ +L E N++ + + GL+ +SR +G Sbjct: 181 QKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGF 238 Query: 219 KIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271 IP + Q YVW+DA Y+ + Y + + FW + H IGKDI+ FH Sbjct: 239 AIPGTNEQKFFYVWLDAPMGYIASFKDYCNRNEIDFDDFWGDNSESELYHFIGKDIIYFH 298 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 A++WPA L S P VF++GF+ G+K+SKS G I ++ + LRY+ Sbjct: 299 ALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFAS 358 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 + D + + + N+D+ + N+ SR I K +D + + F D + Sbjct: 359 RLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF---DPEL 414 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVL 448 S S+ I + + + A+ +++L + +++ D KPW+L K + V Sbjct: 415 ESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVC 474 Query: 449 YVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480 + + + L L+ +P + A + +I F++ Sbjct: 475 SQGINMFKVLIAYLKPIIPSIVAEAERFLNIQFIS 509 >gi|308049567|ref|YP_003913133.1| methionyl-tRNA synthetase [Ferrimonas balearica DSM 9799] gi|307631757|gb|ADN76059.1| methionyl-tRNA synthetase [Ferrimonas balearica DSM 9799] Length = 685 Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 131/543 (24%), Positives = 235/543 (43%), Gaps = 57/543 (10%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E K+ +++A+ Y N H+GH E I D+ RF L G + D HG I A Sbjct: 4 ESRKILVTSALPYANGPIHLGHMLEYIQTDIWVRFQNLRGNKCTYVCADDTHGTPIMLKA 63 Query: 63 QNAGVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 Q G++ + + Q S+ + D AD I++D++ T + + +++++ + G I Sbjct: 64 QQLGMSPEEMIAQVSKEHQADFAD-FHIAFDNYHSTHSDENRQWAQEVYRRLQEGGYIKT 122 Query: 122 GCYSGWYSLRDEAYY-----------NDDEVYKGADGQYYNAQHNPVQ------------ 158 + E + D E G + + ++PV+ Sbjct: 123 KVIEQLFDPEKEMFLPDRFVKGTCPKCDTEDQYGDNCENCGTTYSPVELKNPKSVLSGAT 182 Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 E E +FF L +++ L + S L E N++ + + GL+ +SR + Sbjct: 183 PVLKESEHFFFDLPQFKEVLQQWTHSGA---LQSEMANKLNEWFEQGLQQWDISRDAPYF 239 Query: 217 GIKIPD-DPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDIL 268 G +IP D + YVW+DA Y+ L D + +W D H IGKDI+ Sbjct: 240 GFEIPGTDGKKFFYVWLDAPIGYMGAFQNLCERRDDLNFEDYWGQDSDAELYHFIGKDII 299 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH+++WPA L ANL P VF+HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 YFHSLFWPAMLHGANLRKPTNVFAHGYVTVNGAKMSKSRGTFIKARTYLDHLNPEYLRYY 359 Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ D + + +RVNAD+ + N+ SR+ I K +DG + A Sbjct: 360 YAAKLNDRIDDLDLNLEDFAQRVNADMVGKLVNIASRTAGFIAKRFDGKL----ADGIDQ 415 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445 +L+ + I + + +A+ ++++L + + Y PW+L K + Sbjct: 416 PELLAEFQNAAETIANFYEGREYGKAIREIMALADKANAYIADAAPWQLAKQEGMEQKTQ 475 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI------------FDILFVADENRCFQSLDQRL 493 V + + + R L I L+ +P++A + + + F++L QR+ Sbjct: 476 EVCSMGIHLFRILMIYLKPVLPEIAKETETFLGAELTWDSINTVLTGHTINPFKALIQRI 535 Query: 494 KPG 496 +P Sbjct: 536 EPA 538 >gi|257454862|ref|ZP_05620113.1| methionyl-tRNA synthetase [Enhydrobacter aerosaccus SK60] gi|257447795|gb|EEV22787.1| methionyl-tRNA synthetase [Enhydrobacter aerosaccus SK60] Length = 703 Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 129/512 (25%), Positives = 226/512 (44%), Gaps = 52/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ R + G V + D HG I A+ Sbjct: 3 KILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKSLGHQVTYVCADDAHGTAIMLKAEAN 62 Query: 66 GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GVT + D + + +D A L + +D++ T + ++++ ++ + G I Sbjct: 63 GVTPEQQIADVKASHEKDFAGFL-VDFDNYYSTHSPENEHYSQLIYNRLYENGHISHKAV 121 Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQY----------YNAQH--NPVQWMEEEG--- 164 Y + D V GA QY YNA NP + Sbjct: 122 EQLYDPEKGLFLADRFVKGECPKCGAKDQYGDNCEVCGTTYNATELKNPYSTLSGATPVL 181 Query: 165 -----YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 YFF L + + L ++ + E L N++ + +GL + +SR +G K Sbjct: 182 KSSIHYFFNLPNFNEFLQNW--TRKEGRLQTSIANKLQEWFDAGLANWDISRDAPYFGFK 239 Query: 220 IPD----DPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPAD-------LHVI 263 IP+ +P YVW+DA Y+ + L + G++ ++W + H I Sbjct: 240 IPNTPASEPDKYFYVWLDAPVGYMASFKNLCDQQGAQLGLNFDEYWSKENHNNTEVYHFI 299 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323 GKDI+ FHA++WPA L A P + +HGF+ GEK+SKS G I ++ + + Sbjct: 300 GKDIVYFHALFWPAMLEGAGFRTPTAINAHGFLTVNGEKMSKSRGTFIKADTYLQNLDPE 359 Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ +++ +D D + ++VN+DL + N+ SR I K++ + A Sbjct: 360 YLRYYFASKLSASVEDINLDLEDFMQKVNSDLVGKVVNIASRCAGFIHKNHGSKL----A 415 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 T S+ ++L ++I + + +A+ +++ + + Y D +KPW L K Sbjct: 416 LTISEPALLQQIIDAGEDIAAAYEAREFSKAMRLIMACADKANEYIDDKKPWALNKVEGQ 475 Query: 443 RA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 +A V V + + RQL + L +P + K Sbjct: 476 QAEVQAVCTVALNIFRQLVVYLAPVLPLMCEK 507 >gi|284159400|ref|YP_441412.3| methionyl-tRNA synthetase [Burkholderia thailandensis E264] gi|83654898|gb|ABC38961.1| methionyl-tRNA synthetase [Burkholderia thailandensis E264] Length = 770 Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 141/547 (25%), Positives = 238/547 (43%), Gaps = 63/547 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ AR R+ G ++ + D HG + A+ Sbjct: 69 RRQILVTSALPYANGQIHIGHLVEYIQTDIWARTMRMHGHEIYYIGADDTHGTPVMLRAE 128 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 129 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAERE 188 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161 Y + + D KG A QY ++ NP + Sbjct: 189 IEQAYDPVKQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPYSVVSGATP 247 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 +FFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 248 VRKTSTHHFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 305 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIGKDI 267 +G +IP P YVW+DA Y + L G W + H IGKDI Sbjct: 306 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWISKDSTTEQYHFIGKDI 365 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 366 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDAGLNPEWLR 425 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ ++K +DG + + Sbjct: 426 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQA----SA 481 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 ++ +L + +I + + + RAL Q + L V+ Y D KPWEL K +P A Sbjct: 482 TNHPLLVTLRDAIPQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWELAK-DPANAV 540 Query: 446 TV---LYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADEN---------RCFQS 488 + V++E R L++ L+ +P++A + L + AD N R +Q Sbjct: 541 ALHETCTVSLEAFRLLSLALKPVLPRVAEGVEAFLGIAPLTWADANKPLSSEQPIRAYQH 600 Query: 489 LDQRLKP 495 L R+ P Sbjct: 601 LMTRVDP 607 >gi|218259406|ref|ZP_03475150.1| hypothetical protein PRABACTJOHN_00807 [Parabacteroides johnsonii DSM 18315] gi|218225135|gb|EEC97785.1| hypothetical protein PRABACTJOHN_00807 [Parabacteroides johnsonii DSM 18315] Length = 679 Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 135/515 (26%), Positives = 237/515 (46%), Gaps = 43/515 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ I+TA+ Y N HIGH A + AD+ AR+ RL G +VL G+DEHG I Sbjct: 3 KQFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + IS+D + RTT H ++ + DKG+ Sbjct: 63 RAKKEGITPQDVVDRYHGIIKKSFEEFGISFDIYSRTTSATHRQVASDFFRTLYDKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------- 160 + +Y + + D +E G + +P + Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGS 182 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + ++ L ++ L + E H E+ + + S++ GL+ ++SR Sbjct: 183 QPVMKETKHWYLPLDKWEPFLRQWILEGHKEWKPNV--YGQCKSWLDMGLQPRAVSRD-L 239 Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267 DWGI +P D ++YVW DA Y++ T L P+ + W D +H IGKD Sbjct: 240 DWGIPVPVDGAEGKVLYVWFDAPIGYISNTKEL-LPESWET--WWKDPETKMVHFIGKDN 296 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324 + FH I +PA L + + LP+ V ++ F+ +G+KIS S + E + ++ D Sbjct: 297 IVFHCIVFPAMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDV 356 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N +L +GN V+R++ + K ++G +P G T Sbjct: 357 LRYVLTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTEKYFEGKVPAAGELT 416 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 + D L+ + V ++ + A + ++L ++Y +PW+L KT+ R Sbjct: 417 DYDRQTLTDFANVKADVERLLDTYHFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMARV 476 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +T++ + +++ LAI + F+P K+ +L V Sbjct: 477 ATIMNIALQITANLAIAFEPFLPFSMEKLNKMLNV 511 >gi|254247500|ref|ZP_04940821.1| Methionyl-tRNA synthetase, class Ia [Burkholderia cenocepacia PC184] gi|124872276|gb|EAY63992.1| Methionyl-tRNA synthetase, class Ia [Burkholderia cenocepacia PC184] Length = 756 Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 134/508 (26%), Positives = 222/508 (43%), Gaps = 47/508 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG I A+ Sbjct: 57 QILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLRAEKE 116 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T K +D+ + D +S+D+F T + + ++ + + G I + Sbjct: 117 GLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSEENRVLSENIYLALQEAGLIAEREIE 176 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161 Y E + D KG A QY ++ NP + Sbjct: 177 QAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATPVR 235 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTFD 215 + YFFRLS + S+ + E N++ ++ +S L D +SR Sbjct: 236 KTSKHYFFRLS--DPRCESFLREWVSGLAQPEATNKMREWLGDAGESKLADWDISRDAPY 293 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILR 269 +G +IP P YVW+DA Y + L +G W H IGKDIL Sbjct: 294 FGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGIDFDAWIRPGSKAEQYHFIGKDILY 353 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328 FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LRY+ Sbjct: 354 FHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYY 413 Query: 329 LVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ A +D + D + RVN+DL N+ SR+ ++K +DG + + + Sbjct: 414 FAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAMN 469 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445 +++ + +I + + + RAL + L EV+ Y D KPW+L K N Sbjct: 470 HPLVAKLRDAIAQIAASYEAREYGRALRHTMELADEVNAYVDGAKPWDLAKDPANAVALH 529 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473 V++E R L++ L+ +P++A + Sbjct: 530 ETCSVSLEAFRLLSLALKPVMPRVAEAV 557 >gi|297625905|ref|YP_003687668.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921670|emb|CBL56227.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 559 Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 138/494 (27%), Positives = 218/494 (44%), Gaps = 66/494 (13%) Query: 40 LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99 + G DVL +G+DEHG I A G+T + D+ R + L +SYD + RTT Sbjct: 1 MSGNDVLLVSGSDEHGTAIQVKADAEGLTAQETADKYHRIIVEDLQGLGLSYDLYTRTTT 60 Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQ 148 H + +++ + D G I + G S D E +G Sbjct: 61 LNHEAVTQEVFRTLYDNGYIIEKTQLGAISPSTGRTLADRYIEGTCPICGYEFARGDQCD 120 Query: 149 YYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194 Q +P+ ++E +F L A ++L+++ S ++ R Sbjct: 121 NCGNQLDPIDLINPHSRIDGEVPDFVETTHFFLDLPALAEELMTWLNSRKDW------RP 174 Query: 195 EVISFVKSGLKDLSLSRKT--FDWGIKIP-----DDPQYIMYVWIDALTNYLTTT----G 243 V++F + K+L T DWGI IP +D +YVW DA+ YL+ + Sbjct: 175 NVLNFSYNFAKELKPRAITRDLDWGIPIPVEGWENDDMKRIYVWFDAVIGYLSGSIEWAR 234 Query: 244 YLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSAN--------------- 283 +PD KA W D + +GKD + FH++ WP+ LL N Sbjct: 235 RTGDPDAWKA--WWQDPEARSYYFMGKDNIVFHSVIWPSMLLGLNGEGSRGGTPSKWLGK 292 Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 L LP +V S F+ KG K+ S G VI + + E G D LRY++ KD + Sbjct: 293 LDLPTEVVSSEFLTMKGSKVDTSHGVVIYVGDFLREFGPDTLRYYIAVAGPENKDTDFTW 352 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 D +R N +LAN GNLV+RS+SM K+ +G IP D +L+ + + Sbjct: 353 DEFVRRNNNELANEWGNLVNRSLSMAFKN-NGEIPPAHELLNVDAELLASSKAAFITVGK 411 Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463 ++ A+ + + +V+ ++Y Q+PW+L + DR TVL ++V+ LL Sbjct: 412 LIEECKFKAAITEAMRVVATANQYISQQEPWKLGD-DTDRRDTVLNTALQVVSDANTLLT 470 Query: 464 AFVPKLANKIFDIL 477 F+P A KIF++L Sbjct: 471 PFMPHSAQKIFEML 484 >gi|126459772|ref|YP_001056050.1| methionyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548] gi|187647758|sp|A3MVB7|SYM_PYRCJ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|126249493|gb|ABO08584.1| methionyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548] Length = 570 Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 140/511 (27%), Positives = 233/511 (45%), Gaps = 44/511 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K I +A Y PH+G+ ++ ADV AR+ RL G DV+F +G+D HG I A Sbjct: 3 KYVIGSAWPYVQTVPHLGNMIGSVLSADVYARYLRLRGHDVVFVSGSDMHGTPIEVEAIQ 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV + + ++ +IS+D + T + H + +K+I + G I+ Sbjct: 63 LGVDPAEYAFKMHGVVAELFKRWNISFDLYTHTHSETHVAFVQEFFKRIYENGYIFTKDE 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQ--------------W 159 Y RD+ + D + Y+ A G Q N +P Q W Sbjct: 123 EMPYCPRDKIFLPDRFIIGKCPYCGYERARGDQCENCGRLLDPKQLVEPRCAVCGSKPEW 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 ++ L +DK+ Y E +P LP + ++ +K GLK +++R WGI Sbjct: 183 RLTRHWYLDLRRLEDKIRKYVEENPH--LPQNAKEMSLAMLKEGLKPRAVTRDN-KWGIP 239 Query: 220 --IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWP-ADLHVI---GKDILRF 270 P +YVW +A+ Y++ G ++ K+W D +I GKD + F Sbjct: 240 APFPGAEGKTIYVWFEAVLGYISAVVEHFKRLGKESEWEKYWRDPDTKIIFFVGKDNIPF 299 Query: 271 HAIYWPAFLLS--ANLPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDALR 326 H I PA LL+ LP S ++L++G+K SKS G ID E + + D R Sbjct: 300 HVIILPALLLANGGGYTLPTTTASTEYLLYEGDKFSKSRRWGIWID--EALHLLPADYWR 357 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + LV +D + + VN L + +GN V+R +S I G++P PG E Sbjct: 358 FILVYIRPENRDTSFTWAQALEIVNKVLNDDVGNYVNRVLSFIKSRMGGVVPPPGTPQEE 417 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 D+S L ++ ++ + + + AL V+ + E +RY +A+ PW+L KT P+ A+ Sbjct: 418 DKSFLQAALQLFKKAERHYEAVELKDALHTVVEIAREGNRYLNARAPWDLLKTRPEEANA 477 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V+Y ++ LA L +P+ K+++++ Sbjct: 478 VMYHAYWSLKMLAAGLAPVIPESVEKMWEMM 508 >gi|170733778|ref|YP_001765725.1| methionyl-tRNA synthetase [Burkholderia cenocepacia MC0-3] gi|226710897|sp|B1JWS3|SYM_BURCC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|169817020|gb|ACA91603.1| methionyl-tRNA synthetase [Burkholderia cenocepacia MC0-3] Length = 716 Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 134/508 (26%), Positives = 222/508 (43%), Gaps = 47/508 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG I A+ Sbjct: 19 QILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLRAEKE 78 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T K +D+ + D +S+D+F T + + ++ + + G I + Sbjct: 79 GLTPKQLIDRVWTEHKRDFDSFGVSFDNFYTTDSEENRVLSENIYLALQEAGLIAEREIE 138 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161 Y E + D KG A QY ++ NP + Sbjct: 139 QAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATPVR 197 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTFD 215 + YFFRLS + S+ + E N++ ++ +S L D +SR Sbjct: 198 KTSKHYFFRLS--DPRCESFLREWVSGLAQPEATNKMREWLGDAGESKLADWDISRDAPY 255 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILR 269 +G +IP P YVW+DA Y + L +G W H IGKDIL Sbjct: 256 FGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGIDFDAWIRPGSKAEQYHFIGKDILY 315 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328 FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LRY+ Sbjct: 316 FHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYY 375 Query: 329 LVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ A +D + D + RVN+DL N+ SR+ ++K +DG + + + Sbjct: 376 FAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAMN 431 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445 +++ + +I + + + RAL + L EV+ Y D KPW+L K N Sbjct: 432 HPLVAKLRDAIAQIAASYEAREYGRALRHTMELADEVNAYVDGAKPWDLAKDPANAVALH 491 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473 V++E R L++ L+ +P++A + Sbjct: 492 ETCSVSLEAFRLLSLALKPVMPRVAEAV 519 >gi|87118382|ref|ZP_01074281.1| methionyl-tRNA synthetase [Marinomonas sp. MED121] gi|86166016|gb|EAQ67282.1| methionyl-tRNA synthetase [Marinomonas sp. MED121] Length = 685 Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 139/506 (27%), Positives = 221/506 (43%), Gaps = 48/506 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + + K+ +++A+ Y N H+GH E I DV RF +L G D HG I Sbjct: 3 QSQRKILVTSALPYANGSIHLGHMLEHIQTDVWVRFQKLRGHLCTAVCADDAHGTAIMIK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A G T + ++ + MAD D I+YD++ T + + + ++K + D I Sbjct: 63 ADKNGETPEQLIEAVRQEH--MADFNDFMIAYDNYHSTHSEENRELSSHIYKTLRDNDKI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQ--- 158 Y E + D KG A+ QY Y A NPV Sbjct: 121 AVRSIVQAYDPEKEMFLAD-RFIKGTCPKCKAEDQYGDNCEVCSATYTAMEMINPVSVYS 179 Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 E E YFF+L +Q L + S L + N++ ++ SGL++ +SR Sbjct: 180 GATPVEKESEHYFFKLPEFQAFLADWTRSG---TLQDQVANKLAEWLDSGLQEWDISRDA 236 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-----AKFWPADL-HVIGKD 266 +G +IPD P YVW+DA Y+ + L D DG AK +L H IGKD Sbjct: 237 PYFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCDRTDGLNFDDYWAKGADTELYHFIGKD 296 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L A P V +HG++ G+K+SKS G I + + LR Sbjct: 297 IINFHALFWPAMLECAGYRTPTAVNAHGYVTVDGKKMSKSRGTFIKARTYLNHLDPQYLR 356 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ D + + +RVN+D+ + N+ SR+ S I K +D + T + E Sbjct: 357 YYFTAKLNATPDDIDLNLEDFIQRVNSDVVGKVVNIASRTASFINKKFDNQLATEVSEAE 416 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--R 443 +S + I + + + +A+ +V+ L + Y Q PW L K + Sbjct: 417 MIQSFIDAGDL----IADCFEKREYSKAIREVMRLADVANTYIADQAPWVLAKNEETLPK 472 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL 469 V V++ + LA L+ +P + Sbjct: 473 VQEVCTVSLNLFSILATYLKPILPNM 498 >gi|74316878|ref|YP_314618.1| methionyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259] gi|123759136|sp|Q3SKG8|SYM_THIDA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|74056373|gb|AAZ96813.1| methionyl-tRNA synthetase, class Ia [Thiobacillus denitrificans ATCC 25259] Length = 690 Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 130/504 (25%), Positives = 222/504 (44%), Gaps = 44/504 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N H+GH E I D+ RF ++ G + + D HG I A+ Sbjct: 4 QILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMRGTNCRYMCADDTHGTAIMLRAEKE 63 Query: 66 GVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 +T + + + + + RD A I +D + T + + ++ + D G I Sbjct: 64 AITPEALIQRVWAEHTRDFAG-FHIGFDHYYSTHSDENREHASKIYLALKDAGLIEVKTI 122 Query: 125 SGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM------------- 160 + Y + D E K GA QY A ++P + Sbjct: 123 AQLYDPVKNLFLPDRFIKGECPKCGAADQYGDNCEVCGATYSPTELKNPVSAVSGATPVH 182 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + E YFF+L + L + S L E N++ + +GL + +SR +G + Sbjct: 183 KDSEHYFFKLGDCEAFLREWTTSG---TLQAEAANKMQEWFAAGLNNWDISRDAPYFGFE 239 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAI 273 IPD P YVW+DA Y+ + G W +H IGKDIL FHA+ Sbjct: 240 IPDAPGKYFYVWLDAPVGYMASFARYAKDHGLDFDAWWGKDSKTELVHFIGKDILYFHAL 299 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVRE 332 +WPA L + LP V++HGF+ G+K+SKS G I +++ + + LRY+ + Sbjct: 300 FWPAMLKFSGHRLPTAVYAHGFLTVNGQKMSKSRGTFITASSYLDQGLNPEWLRYYYAAK 359 Query: 333 I-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + +D + D RVN+DL N+ SR+ I K +DG + A + ++ Sbjct: 360 LNGTMEDIDLNLDDFVARVNSDLVGKFINIASRTAGFIHKKFDGKL----ADGVGNIELI 415 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLY 449 I + + + +AL ++++L ++Y +KPWEL K + R V Sbjct: 416 GEFQAAADTIAAHYEARDYAKALREIMALADRANQYVADEKPWELAKDDAAVYRLHEVCT 475 Query: 450 VTVEVIRQLAILLQAFVPKLANKI 473 V + + R L + L+ +PKLA ++ Sbjct: 476 VALNLFRLLTLYLKPVLPKLAGEV 499 >gi|118497075|ref|YP_898125.1| methionyl-tRNA synthetase [Francisella tularensis subsp. novicida U112] gi|118422981|gb|ABK89371.1| methionyl-tRNA synthetase [Francisella novicida U112] Length = 685 Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 129/515 (25%), Positives = 234/515 (45%), Gaps = 48/515 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I +D+ RF +L G +F G+D HG I A++ Sbjct: 15 KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSL 74 Query: 66 GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + V + S R+ +D D +I++D++ T + + ++ K+++K I K Sbjct: 75 GITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 133 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161 + Y + + D V KG A+ QY A ++P + + Sbjct: 134 AQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI 192 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L A + + + ES+ +L E N++ + + GL+ +SR +G Sbjct: 193 QKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGF 250 Query: 219 KIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271 IP + Q YVW+DA Y+ + Y + + FW + H IGKDI+ FH Sbjct: 251 AIPGTNEQKFFYVWLDAPMGYIASFKDYCNRNEIDFDDFWGDNSESELYHFIGKDIIYFH 310 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 A++WPA L S P VF++GF+ G+K+SKS G I ++ + LRY+ Sbjct: 311 ALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFAS 370 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 + D + + + N+D+ + N+ SR I K +D + + F D + Sbjct: 371 RLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF---DPEL 426 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVL 448 S S+ I + + + A+ +++L + +++ D KPW+L K + V Sbjct: 427 ESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVC 486 Query: 449 YVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480 + + + L L+ +P + A + +I F++ Sbjct: 487 SQGINMFKVLIAYLKPIIPSIVAEAERFLNIQFIS 521 >gi|317405565|gb|EFV85868.1| MetG protein [Achromobacter xylosoxidans C54] Length = 688 Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 148/568 (26%), Positives = 248/568 (43%), Gaps = 80/568 (14%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 L+++TA+ Y N HIGH E I AD+ R R+ G V F D HG I A+ G Sbjct: 5 LFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEKEG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH----HDTCRIL-------WKKISD 115 +T + V + + + I +D + T + D R L + I Sbjct: 65 ITPQALVARYAAERPQYLNGFHIRFDHWHTTDSPENVALSQDIYRALKAQDLIETRSIEQ 124 Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------------E 161 D KG + ++ E + G + A + P + Sbjct: 125 FYDPVKGMFLADRYIKGECPKCHAKDQYGDSCEVCGAVYAPTDLINPYSALTGATPVLKS 184 Query: 162 EEGYFFRLS-----AYQDKLLSYYESHPEFILPIERRNEVISFV-----KSGLKDLSLSR 211 + +FF+LS + + + +H L E + ++ ++ L D +SR Sbjct: 185 SDHFFFKLSDPRCVEFLQQWTTGSNAHGGKHLQPEMLAKTREWLGAEDGEAKLGDWDISR 244 Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG-----------YLDNPDGSKAKFWPADL 260 +GI+IPD P YVW+DA YL + L +P GS + + Sbjct: 245 DAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAVKGLDFDALLDPAGSTEQ-----V 299 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 H IGKDI+ FHA++WPA L A P V HGFI GEK+SKS G I P+ + E+ Sbjct: 300 HFIGKDIVYFHALFWPAMLKFAGRKTPDAVNVHGFITVSGEKMSKSRGTGISPLRYL-EL 358 Query: 321 GVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 G++A +RY++ ++ A +D ++ + RVN+DL N+ SR+ S I K +DG + Sbjct: 359 GMNAEWMRYYIAAKLNARVEDMDFNPEDFIARVNSDLVGKYVNIASRAASFITKHFDGAL 418 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 A++ ++ + + + IR + + +RA+ ++++ +++ FD +PW L Sbjct: 419 ----AYSGDTAALAAEYAAQAESIRAAFEAREYNRAIREIMAYADRINQAFDTAQPWVLA 474 Query: 438 K--TNPDRAST-----VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN------- 483 K D A + ++ + L+++L +P LA ++ LF AD + Sbjct: 475 KGIATADEAQKAALQDICSRSLAGFKALSVMLAPVLPALAERVARELFAADADFTWADAA 534 Query: 484 ------RCFQSLDQRLKPGFMLHKTFDP 505 F+ L QR++P ML F+P Sbjct: 535 VLPQRVAPFKHLMQRVEPQ-MLEDLFEP 561 >gi|187929666|ref|YP_001900153.1| methionyl-tRNA synthetase [Ralstonia pickettii 12J] gi|309781566|ref|ZP_07676301.1| methionine--tRNA ligase [Ralstonia sp. 5_7_47FAA] gi|187726556|gb|ACD27721.1| methionyl-tRNA synthetase [Ralstonia pickettii 12J] gi|308919671|gb|EFP65333.1| methionine--tRNA ligase [Ralstonia sp. 5_7_47FAA] Length = 710 Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 140/533 (26%), Positives = 234/533 (43%), Gaps = 50/533 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ER ++ +++A+ Y N HIGH E I D+ RF R+ G + + D HG + Sbjct: 21 MSER-RILVTSALPYANGPIHIGHLVEYIQTDIWVRFQRMRGHETYYVGADDTHGTPVML 79 Query: 61 AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +++ + + RD + L +S+D++ T + + C+ ++ K+ + G I Sbjct: 80 RAEKEGLTPRQLIERVWTEHKRDFDNFL-VSFDNYYSTDSDENKELCQNVYLKLKEAGLI 138 Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM-------- 160 +Y E + D E K GA QY A + P Sbjct: 139 DVREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSG 198 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210 E YFF+LS + ++ + E N++ ++ ++ L D +S Sbjct: 199 ATPVRKSSEHYFFKLS--DPRCENFLRDWVADLAQPEATNKMREWLGEEGEAKLSDWDIS 256 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIG 264 R +G +IP P YVW+DA Y + L G W H IG Sbjct: 257 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCAKRGLDFDAWINEHSTTEQYHFIG 316 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 KDIL FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + Sbjct: 317 KDILYFHTLFWPAMLKFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPE 376 Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ ++ A +D + D RVN+DL N+ SRS ++K ++G + Sbjct: 377 WLRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVSDAAL 436 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TN 440 ++ +I + + + +AL V+ L V+ + D +KPW+L K N Sbjct: 437 ----GHPLMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAFVDTEKPWDLAKDEAN 492 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493 ++ V +E R LA+ L+ +P +I L V E ++S+D +L Sbjct: 493 REKLHAACSVALEAFRLLAVYLKPILPTTVERIEAFLNV--EPLTWRSIDSQL 543 >gi|182420091|ref|ZP_02951325.1| methionyl-tRNA synthetase [Clostridium butyricum 5521] gi|237669544|ref|ZP_04529524.1| methionine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376128|gb|EDT73715.1| methionyl-tRNA synthetase [Clostridium butyricum 5521] gi|237654988|gb|EEP52548.1| methionine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 542 Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 131/511 (25%), Positives = 233/511 (45%), Gaps = 51/511 (9%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I A Y N + H+G ++ DVLAR+HRL G DV+F +G+D HG + A+ G++ Sbjct: 5 IGNAWPYANGELHLGRIAVLLPGDVLARYHRLMGDDVVFVSGSDSHGTPVTMKAKAEGMS 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + ++ + L S+D F +T + H K++ DKG IY+ Y Sbjct: 65 PEEASLHYHEKIKECFEGLGFSFDIFTKTHTEYHSKKVSEFIKELYDKGYIYEKEVEQTY 124 Query: 129 SLRDEAYYND----------------------DEVYKGAD---GQYYNAQHNPVQWMEEE 163 + Y D E+++ + + + PV E + Sbjct: 125 CPKCNEYLLDRYIEGKCPSCGSHAVGDQCDECSEIFESEELLEKKCIFCKSEPVI-KETK 183 Query: 164 GYFFRLSAYQDKLLSYY---ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 FF LS ++ + Y E I R ++ GL+D +++R F+WG+ + Sbjct: 184 HLFFALSKLENDVKRIYIRQNGWRENAQKITNR-----YLNEGLRDRAVTR-DFNWGVDV 237 Query: 221 P----DDPQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD----LHVIGKDILRFH 271 P +D + +YVWI+A+ YLT + LD D ++W + V GKD + FH Sbjct: 238 PFEGFEDKK--IYVWIEAVMGYLTASMKCLDERDEDYMEYWNGEDSRIYFVHGKDNIPFH 295 Query: 272 AIYWPAFLLSANLPLPK-KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 + +PA L + P + S ++ +G+ S I P ++E+ VD +RY+L+ Sbjct: 296 TVIFPAILSGLGIKRPNIREISSEYMKLEGKNFSAVKNWAIWPDYLMEKYNVDLIRYYLI 355 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 KD + N +L GNL++R ++ I K++DG IP D++ Sbjct: 356 SNGPEVKDTDFTWKSFIHANNNELVGLFGNLINRVLAFIDKNFDGNIPKGSV----DKAF 411 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 ++ ++ +N++ +AL + S + + ++YFD +KPW K + D+ S +Y Sbjct: 412 KDDMFKLYCDVGDNIEEGNFKKALEYIFSAIKKANKYFDDEKPWVNIKKDRDKCSECMYT 471 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 +++I L+ L++ F+P A KI L + + Sbjct: 472 CIQIIANLSNLIEPFLPFAAKKIRGFLEIKN 502 >gi|17547100|ref|NP_520502.1| methionyl-tRNA synthetase [Ralstonia solanacearum GMI1000] gi|25009371|sp|Q8XWT9|SYM_RALSO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|17429401|emb|CAD16088.1| probable methionyl-trna synthetase (methionine--trna ligase)(metrs) protein [Ralstonia solanacearum GMI1000] Length = 688 Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 143/537 (26%), Positives = 238/537 (44%), Gaps = 58/537 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ER ++ +++A+ Y N HIGH E I D+ RF R+ G + + D HG + Sbjct: 1 MSER-RILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHETYYVGADDTHGTPVML 59 Query: 61 AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +++ + + RD + L +S+D++ T + + C ++ K+ + G I Sbjct: 60 RAEKEGITPRQLIERVWTEHKRDFDNFL-VSFDNYYSTDSDENRELCERVYLKLKEAGLI 118 Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM-------- 160 +Y E + D E K GA QY A + P Sbjct: 119 DVREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSG 178 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210 E YFF+LS + ++ + E N++ ++ +S L D +S Sbjct: 179 ATPVRKSSEHYFFKLS--DPRCETFLRDWVGDLAQPEATNKMREWLGDEGESTLSDWDIS 236 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIG 264 R +G +IP P YVW+DA Y + L G W + H IG Sbjct: 237 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSTHSTAEQYHFIG 296 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 KDIL FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + Sbjct: 297 KDILYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPE 356 Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ ++ A +D + D RVN+DL N+ SRS ++K ++G + Sbjct: 357 WLRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRV----- 411 Query: 383 FTESDESILSVCSRVLQE----IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 +D ++ + L+E I + + + +AL V+ L V+ Y D +KPW+L K Sbjct: 412 ---NDAALANPLMVQLREAAPQIADLYEKREYSKALRTVMELADAVNAYVDTEKPWDLAK 468 Query: 439 --TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493 D+ V +E R LA+ L+ +P +I L + N ++++D +L Sbjct: 469 DEAQRDKLHAACSVALEAFRLLAVYLKPILPSTVARIEAFLNIEPLN--WRAIDAQL 523 >gi|153000977|ref|YP_001366658.1| methionyl-tRNA synthetase [Shewanella baltica OS185] gi|187647771|sp|A6WP56|SYM_SHEB8 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|151365595|gb|ABS08595.1| methionyl-tRNA synthetase [Shewanella baltica OS185] Length = 689 Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 123/508 (24%), Positives = 238/508 (46%), Gaps = 49/508 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ +R+ +L G + + D HG I AQ Sbjct: 5 QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + + Q N + +D AD ++++D++ T + + ++ K+ D G I Sbjct: 65 QLGIAPEDMIAQVNKEHQQDFAD-FNVAFDNYHSTHSEENRLMASDIYLKLRDNGYIKSK 123 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160 S + +++ + D KG + QY A ++P + + Sbjct: 124 SISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDSCGATYSPTELINPKSAVSGAT 182 Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + E +FF L A++ L + S L +E N++ + + GL+ ++R + Sbjct: 183 PVMKDTEHFFFDLPAFEGMLKEWTRSG---ALQVEMANKLDEWFEQGLQQWDITRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269 G +IPD P YVW+DA Y+ + L P+ S +FW D H IGKDI+ Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH+++WPA L + P V++HG++ G K+SKS G I ++ + + LRY+ Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +RVN+DL + NL SR+ I K ++G + + ++ Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFNGKL------AKIND 413 Query: 389 SILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445 + L+ Q++ + +++ +A+ ++++L + + PW++ K + + A Sbjct: 414 TTLTEAFLAKQDVIADFYESREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAH 473 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473 V + + R L L+ +P+LA + Sbjct: 474 QVCSNALNLFRILVTYLKPVLPRLAQDV 501 >gi|326574245|gb|EGE24193.1| methionyl-tRNA synthetase [Moraxella catarrhalis 101P30B1] Length = 683 Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 136/516 (26%), Positives = 227/516 (43%), Gaps = 47/516 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M K+ +++A+ Y N H+GH E I D+ R + G +V + D HG I Sbjct: 1 MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMGHNVTYVCADDAHGTAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AQ+ G+T + + + + +D A L I +D++ T + + ++ + G I Sbjct: 61 KAQDNGITPEEQIATVKASHEKDFAGFL-IDFDNYHSTHSSENQYFSQKIYTTLKQNGYI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME 161 + + ++ + D KG A QY YNA NP + Sbjct: 120 FTKDVEQLFD-TEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLS 178 Query: 162 EEG--------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 YFF L + + L ++ +S I N++ + +GL +SR T Sbjct: 179 NSSPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSI--YNKLSEWFDAGLAPWDISRDT 236 Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVI 263 +G KIPD +P YVW+DA Y+ + L D D +++ D H I Sbjct: 237 PYFGFKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFI 296 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323 GKDI+ FH+++WPA L A P V +HGF+ GEK+SKS G I + + + Sbjct: 297 GKDIVYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPE 356 Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ +++ +D D + ++VN+DL + N+ SRS I K++DG + Sbjct: 357 YLRYYFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKL--SDE 414 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP- 441 TE +C+ EI + + + +++ + + Y D QKPW L K Sbjct: 415 LTEPKLIDEIICAG--DEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKAGKF 472 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D V V++ + +L I L +PKL+ + + L Sbjct: 473 DEVQKVCTVSLNIFHKLIIYLAPILPKLSEQAREFL 508 >gi|326572648|gb|EGE22637.1| methionyl-tRNA synthetase [Moraxella catarrhalis CO72] Length = 683 Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 136/516 (26%), Positives = 227/516 (43%), Gaps = 47/516 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M K+ +++A+ Y N H+GH E I D+ R + G +V + D HG I Sbjct: 1 MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMGHNVTYVCADDAHGTAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AQ+ G+T + + + + +D A L I +D++ T + + ++ + G I Sbjct: 61 KAQDNGITPEEQIATVKASHEKDFAGFL-IDFDNYHSTHSSENQYFSQKIYTTLKQNGYI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME 161 + + ++ + D KG A QY YNA NP + Sbjct: 120 FTKDVEQLFD-TEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLS 178 Query: 162 EEG--------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 YFF L + + L ++ +S I N++ + +GL +SR Sbjct: 179 NSSPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSI--YNKLSEWFDAGLAPWDISRDA 236 Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVI 263 +G KIPD +P YVW+DA Y+ + L D D +++ D H I Sbjct: 237 PYFGFKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFI 296 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323 GKDI+ FH+++WPA L A P V +HGF+ GEK+SKS G I + + + Sbjct: 297 GKDIVYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPE 356 Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ +++ +D D + ++VN+DL + N+ SRS I K++DG + Sbjct: 357 YLRYYFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKL--SDE 414 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP- 441 TE +C+ EI + + + +++ + + Y D QKPW L KT Sbjct: 415 LTEPKLIDEIICAG--DEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKTGKF 472 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D V V++ + +L I L +PKL+ + + L Sbjct: 473 DEVQKVCTVSLNIFHKLIIYLAPILPKLSEQAREFL 508 >gi|119505636|ref|ZP_01627707.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] gi|119458579|gb|EAW39683.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] Length = 547 Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 130/504 (25%), Positives = 224/504 (44%), Gaps = 49/504 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + +++A+ Y NA H+GH E + D+ RF R G L+ D HG I AA+ + Sbjct: 8 ILVTSALPYANAPLHLGHILEQVQTDIWVRFQRSRGNHCLYVCADDAHGTAIMLAAEKSE 67 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + + ++ N + I++D++ T + ++ ++ +G I + Sbjct: 68 TSPEEHIEAVRLNHLADSTGFLINFDNYGSTHSPENQKWSNEIFSRLEAQGHIGSREITQ 127 Query: 127 WYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------------- 161 + D+ + D KG A QY A ++P ++ Sbjct: 128 AFD-PDKGLFLADRFIKGTCPRCKAPDQYGDNCEACGATYSPTDLIDPVSALSGAVPIEK 186 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E FF+LS +Q+ L + S L RN++ ++ +GL+D +SR +G +I Sbjct: 187 ASEHLFFQLSHFQELLEDWTASGS---LQPAIRNKLSEWIDAGLQDWDISRDAPYFGFEI 243 Query: 221 PDDPQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274 P P YVW+DA Y+ + Y + K+W H IGKDI+ FH ++ Sbjct: 244 PGHPGKYFYVWLDAPIGYIASCLDYCQRENEDFDKWWQLGHDTELYHFIGKDIINFHGLF 303 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L +A L LP +++HGF+ G K+SKS G I ++ + + LRY+ ++ Sbjct: 304 WPAMLQAAGLRLPTAIYAHGFLTVDGTKMSKSRGTFIHASAYLKHLDPEYLRYYFAAKLG 363 Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 G D + D KRVN+DL + N+ SR + K + + + ++ Sbjct: 364 AGVDDFDLNLDDFVKRVNSDLVGKVVNIASRCAGFLRKKFANTLSDHCEEPALVQGFIAA 423 Query: 394 CSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVL 448 + L E RE RA+ ++I+L + ++Y D +KPW L K P + S V Sbjct: 424 GDDIAALYEARE------FSRAMREIIALADQANQYIDEKKPWVLAK-EPGKESEVQAVC 476 Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472 V + + R L L+ +P +A + Sbjct: 477 SVGINLFRVLITYLKPVLPVMAER 500 >gi|89255854|ref|YP_513216.1| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|254367221|ref|ZP_04983250.1| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica 257] gi|123094534|sp|Q2A4Y6|SYM_FRATH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|89143685|emb|CAJ78884.1| Methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|134253040|gb|EBA52134.1| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica 257] Length = 674 Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 129/516 (25%), Positives = 236/516 (45%), Gaps = 49/516 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I +D+ RF +L G +F G+D HG I A++ Sbjct: 3 KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSL 62 Query: 66 GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + V + S R+ +D D +I++D++ T + + ++ K+++K I K Sbjct: 63 GITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161 + Y + + D V KG A+ QY A ++P + + Sbjct: 122 AQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI 180 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L A + + + ES+ +L E N++ + + GL+ +SR +G Sbjct: 181 QKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGF 238 Query: 219 KIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW-----PADL-HVIGKDILRF 270 IP + Q YVW+DA Y+ + Y + + + FW ++L H IGKDI+ F Sbjct: 239 AIPGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYF 298 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 HA++WPA L S P VF++GF+ G+K+SKS G I ++ + LRY+ Sbjct: 299 HALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFA 358 Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 + D + + + N+D+ + N+ SR I K +D + + F D Sbjct: 359 SRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF---DPE 414 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447 + S S+ I + + + A+ +++L + +++ D KPW+L K + V Sbjct: 415 LESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQV 474 Query: 448 LYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480 + + + L L+ +P + + +I F++ Sbjct: 475 CSQGINMFKVLIAYLKPIIPSIVAETERFLNIQFIS 510 >gi|298377830|ref|ZP_06987780.1| methionine--tRNA ligase [Bacteroides sp. 3_1_19] gi|298265276|gb|EFI06939.1| methionine--tRNA ligase [Bacteroides sp. 3_1_19] Length = 679 Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 134/515 (26%), Positives = 236/515 (45%), Gaps = 43/515 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K ++ I+TA+ Y N HIGH A + AD+ AR+ RL G +VL G+DEHG I Sbjct: 3 KHFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + I++D + RTT HH ++ + DKG+ Sbjct: 63 RAKKEGITPQDVVDRYHGIIKKSFEEFGITFDIYSRTTSATHHQMASDFFRTLYDKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------- 160 + +Y + + D +E G + +P + Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGS 182 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + ++ L ++ L + E H E+ + + S++ GL+ ++SR Sbjct: 183 KPVMRETKHWYLPLDKWEPFLREWILEGHKEWKPNV--YGQCKSWLDMGLQPRAVSRD-L 239 Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267 DWGI +P + ++YVW DA Y++ T L PD + W D +H IGKD Sbjct: 240 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETKMVHFIGKDN 296 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324 + FH I +P+ L + + LP+ V ++ F+ +G+KIS S + E + ++ D Sbjct: 297 IVFHCIVFPSMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDV 356 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N +L +GN V+R++ + K ++G +P G T Sbjct: 357 LRYVLTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTDKYFEGKVPAAGELT 416 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 + D L + V + + + A + ++L ++Y +PW+L KT+ R Sbjct: 417 DYDRQTLKDFADVKENVERLLDTYHFRDAQKEAMNLARIGNKYLADMEPWKLAKTDMPRV 476 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +T++ + +++ LAI + F+P K+ +L V Sbjct: 477 ATIMNIALQITANLAIAFEPFLPFSMEKLNKMLNV 511 >gi|255016240|ref|ZP_05288366.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_7] Length = 679 Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 134/515 (26%), Positives = 236/515 (45%), Gaps = 43/515 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K ++ I+TA+ Y N HIGH A + AD+ AR+ RL G +VL G+DEHG I Sbjct: 3 KHFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + I++D + RTT HH ++ + DKG+ Sbjct: 63 RAKKEGITPQDVVDRYHGIIKKSFEEFGITFDIYSRTTSAMHHQMASDFFRTLYDKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------- 160 + +Y + + D +E G + +P + Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGS 182 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + ++ L ++ L + E H E+ + + S++ GL+ ++SR Sbjct: 183 KPVMRETKHWYLPLDKWEPFLREWILEGHKEWKPNV--YGQCKSWLDMGLQPRAVSRD-L 239 Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267 DWGI +P + ++YVW DA Y++ T L PD + W D +H IGKD Sbjct: 240 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETKMVHFIGKDN 296 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324 + FH I +P+ L + + LP+ V ++ F+ +G+KIS S + E + ++ D Sbjct: 297 IVFHCIVFPSMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDV 356 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N +L +GN V+R++ + K ++G +P G T Sbjct: 357 LRYVLTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTDKYFEGKVPAAGELT 416 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 + D L + V + + + A + ++L ++Y +PW+L KT+ R Sbjct: 417 DYDRQTLKDFADVKENVERLLDTYHFRDAQKEAMNLARIGNKYLADMEPWKLAKTDMPRV 476 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +T++ + +++ LAI + F+P K+ +L V Sbjct: 477 ATIMNIALQITANLAIAFEPFLPFSMEKLNKMLNV 511 >gi|126640836|ref|YP_001083820.1| methionyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978] Length = 669 Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 141/530 (26%), Positives = 230/530 (43%), Gaps = 69/530 (13%) Query: 22 IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT-TKVFVDQNSRNF 80 +GH I AD+ R R G DV + D HG I A+ G++ + + + Sbjct: 1 MGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEANGISPEEQIANVQKEHI 60 Query: 81 RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY-----------KGCY----- 124 RD D + +D + T + ++ K + G+I KG + Sbjct: 61 RDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPVTQLFDPEKGMFLSDRF 119 Query: 125 --SGWYSLRDEAYYNDD-EVYKGADGQYYNAQH--NPVQWME--------EEGYFFRLSA 171 + E Y D EV G YNA NP + + YFF+L Sbjct: 120 IKGTCPKCKSEDQYGDSCEVC----GTTYNATELLNPRSTLSGATPVEKSSDHYFFKLPN 175 Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231 + + L + + E LP+ N++ + ++GL D +SR +G +IPD P YVW Sbjct: 176 FAEYLQKW--TRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGFEIPDAPNKYFYVW 233 Query: 232 IDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSAN 283 +DA Y+++ Y+ PD + FW D H IGKDI+ FHA++WPA L AN Sbjct: 234 VDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDIVYFHALFWPAMLEGAN 293 Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYD 342 P +F +GF+ G+K+SKS G I ++ + + LRY+ +++ +D + Sbjct: 294 YRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFASKLSDKVEDSDLN 353 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ--E 400 D ++VN+DL + N+ SR I ++ + + A ++ +S + + E Sbjct: 354 LDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSSTCAESDLVQSFIDAGDSIAAAYE 413 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQL 458 RE A+ ++++L ++Y D +KPW L K V V + + RQL Sbjct: 414 ARE------FSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVLDVCSVGINLFRQL 467 Query: 459 AILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQRLKP 495 A+ L +P LA ++ D L V+ E FQ L QR+ P Sbjct: 468 AVYLAPVLPTLAQQVQDFLKLESFDFESRKQILVSHEIAQFQPLMQRVDP 517 >gi|302339380|ref|YP_003804586.1| methionyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] gi|301636565|gb|ADK81992.1| methionyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] Length = 736 Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 132/518 (25%), Positives = 239/518 (46%), Gaps = 54/518 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++K I++A+ Y N PH+G+ +++ ADV +RF RL G + L+ GTDE+G A Sbjct: 2 KKKRLITSALPYVNNIPHLGNLIQVLSADVFSRFCRLKGYETLYVCGTDEYGTATETRAL 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K D+ + ++ +I++D F RT+ + D + ++KK+ G I + Sbjct: 62 EEGVSPKELCDRYYKIHSEIYSWFNIAFDHFGRTSTQWQTDIVQDIFKKVDAAGYITEQT 121 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWMEEE----GYFFR 168 Y + + D V Y+ A G Q N +P ++ G + Sbjct: 122 IEQLYCESCDRFLADRFVRGTCPHCGYEDARGDQCENCGKLLDPTDLIDPRCGLCGQTPK 181 Query: 169 LSAYQDKLLSYYESHPEFILPIER--------RNEVI---SFVKSGLKDLSLSRKTFDWG 217 L + L + P I++ RN + S+++ GLK+ ++R WG Sbjct: 182 LRSTSHLYLDLPKIRPRLEEWIDKASVEGFWARNAIQMTRSWIRDGLKERCITRD-LKWG 240 Query: 218 IKIPDDPQY---IMYVWIDALTNYLTTTGYL--------DNPDGSKAKFWPADL-HVIGK 265 I +P P Y + YVW DA Y++ T L NPD DL IGK Sbjct: 241 IPVPK-PGYEGKVFYVWFDAPIGYISITANLTDEWETWWKNPD-------EVDLFQFIGK 292 Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322 D + FH + +P+ L+++ N L + S ++ ++ K SKS G V + Sbjct: 293 DNIPFHTVIFPSSLIASGDNWTLLHHMSSTEYLNYESGKFSKSKGIGVFGTDARDTGIPA 352 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R+++ D + +++VN +L +GNLV+R+++ + + YDG +P Sbjct: 353 DVWRFYIFYNRPEKSDALFTWSDFQEKVNGELIGNLGNLVNRTLTFVSRFYDGKLPEAAI 412 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 D + + EI E+ + + A ++ +L S ++ F +PW+L+K NP+ Sbjct: 413 ----DADMAAWIREREAEITEHFERAELRDAFRKIFALSSYGNKAFQEGEPWKLRKENPE 468 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 A+T+L V ++R L +L++ F+P+ + ++ + Sbjct: 469 AAATLLSTLVYLVRDLGVLVEPFIPETSGRMLSFFGIG 506 >gi|304382941|ref|ZP_07365423.1| methionine--tRNA ligase [Prevotella marshii DSM 16973] gi|304335966|gb|EFM02214.1| methionine--tRNA ligase [Prevotella marshii DSM 16973] Length = 681 Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 141/517 (27%), Positives = 246/517 (47%), Gaps = 51/517 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ I+ A+ Y N HIGH A I +D+ AR+ RL G +V F G+DEHG I Sbjct: 4 KKYKRTTITAALPYANGGVHIGHLAGVYIPSDIYARYLRLKGEEVAFICGSDEHGVPITI 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + IS+D + RTT + H+ ++K+ D G + Sbjct: 64 RARKEGITPQDVVDRYHTLIKKSFEDFGISFDIYSRTTSETHNRFASDFFRKLYDDGKLM 123 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWM--------- 160 + +Y + D + ++GA G + + +P + + Sbjct: 124 EKTSRQYYDEEAHQFLADRYITGECPHCHHQGAYGDQCEKCGSDLDPTELINPKSTISGS 183 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213 + + ++ L+ YQ+ L ++ E H E+ R+ V KS L DL L + Sbjct: 184 KPVMKDTKNWYLPLNDYQEWLRTWILEDHKEW------RSNVYGQCKSWL-DLDLQPRAM 236 Query: 214 ---FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIG 264 DWGI +P + ++YVW DA Y++ T L PD S K+W +H IG Sbjct: 237 TRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-YPD-SWEKWWKDPETRLIHFIG 294 Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--G 321 KD + FH I +P L + LP+ V ++ F+ + +KIS S + E +EE Sbjct: 295 KDNIVFHCIVFPVMLKAHGGYILPENVPANEFLNLEDDKISTSKNWAVWLHEYLEEFPGK 354 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D LRY L KD + ++R N +L GN V+R++ + K ++G++P G Sbjct: 355 QDVLRYVLTANAPETKDNNFTWKDFQERNNNELVAVYGNFVNRALQLTQKYFNGVVPACG 414 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHR-ALAQVISLVSEVDRYFDAQKPWELKKTN 440 T+ D L V Q++ E + N R A + ++L ++Y +PW++ K + Sbjct: 415 ELTDIDCQTLDELKTVKQKV-EGLLNVFKFRDAQKEAMNLARIGNKYITDCEPWKVAKDD 473 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 R T+L+V+++++ L+I+ + F+P + + ++L Sbjct: 474 MKRVETILHVSLQLVANLSIVFEPFLPFSSKTLREML 510 >gi|167835830|ref|ZP_02462713.1| methionyl-tRNA synthetase [Burkholderia thailandensis MSMB43] Length = 718 Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 130/510 (25%), Positives = 219/510 (42%), Gaps = 47/510 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G ++ + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ K +++ R + D +S+D+F T + ++ + + G I + Sbjct: 77 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAERE 136 Query: 124 YSGWYSLRDEAY------------------YNDDEVYKGADGQYYNAQH--------NPV 157 Y E + Y D G Q + H PV Sbjct: 137 IEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAPV 196 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 + YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 197 RRTSTH-YFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 253 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L G W H IGKDI Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCEQRGIDFDAWINKDSTTEQYHFIGKDI 313 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ ++K +DG + + Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQA----SA 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +++ + +I + + + RAL Q + L V+ Y D KPWEL K N Sbjct: 430 MNHPLVATLRDAIAQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWELAKDPVNAVA 489 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 V++E R L++ L+ +P++A + Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAEGV 519 >gi|300703367|ref|YP_003744969.1| methionyl-tRNA synthetase [Ralstonia solanacearum CFBP2957] gi|299071030|emb|CBJ42339.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) [Ralstonia solanacearum CFBP2957] Length = 688 Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 140/533 (26%), Positives = 233/533 (43%), Gaps = 50/533 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ER ++ +++A+ Y N HIGH E I D+ RF R+ G ++ + D HG + Sbjct: 1 MSER-RILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHEIYYVGADDTHGTPVML 59 Query: 61 AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +++ + + RD + L +S+D++ T + + C ++ K+ + I Sbjct: 60 RAEKEGITPRQLIERVWTEHKRDFDNFL-VSFDNYYSTDSDENRELCERVYLKLKEADLI 118 Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM-------- 160 +Y E + D E K GA QY A + P Sbjct: 119 DVREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSG 178 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210 E YFF+LS + ++ + E N++ ++ +S L D +S Sbjct: 179 ATPVRKSSEHYFFKLS--DPRCETFLREWVADLAQPEATNKMREWLGDEGESTLSDWDIS 236 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIG 264 R +G +IP P YVW+DA Y + L G W + H IG Sbjct: 237 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSTHSTAEQYHFIG 296 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 KDIL FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + Sbjct: 297 KDILYFHTLFWPAMLQFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPE 356 Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ ++ A +D + D RVN+DL N+ SRS ++K ++G + Sbjct: 357 WLRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVNDAAL 416 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TN 440 ++ +I + + + +AL V+ L V+ Y D +KPW+L K Sbjct: 417 ----GNPLMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAYVDTEKPWDLAKDEAQ 472 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493 D+ V +E R LA+ L+ +P +I L V N ++++D +L Sbjct: 473 RDKLHAACSVALEAFRLLAVYLKPILPSTVARIEAFLNVEPLN--WRAIDAQL 523 >gi|116690457|ref|YP_836080.1| methionyl-tRNA synthetase [Burkholderia cenocepacia HI2424] gi|162218052|ref|YP_621702.2| methionyl-tRNA synthetase [Burkholderia cenocepacia AU 1054] gi|187647708|sp|A0K9L0|SYM_BURCH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|187649797|sp|Q1BUH6|SYM_BURCA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|116648546|gb|ABK09187.1| methionyl-tRNA synthetase [Burkholderia cenocepacia HI2424] Length = 718 Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 134/505 (26%), Positives = 221/505 (43%), Gaps = 47/505 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG I A+ Sbjct: 19 QILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLRAEKE 78 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T K +D+ + D +S+D+F T + + ++ + + G I + Sbjct: 79 GLTPKQLIDRVWTEHKRDFDSFGVSFDNFYTTDSEENRVLSENIYLALQEAGLIAEREIE 138 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161 Y E + D KG A QY ++ NP + Sbjct: 139 QAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATPVR 197 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTFD 215 + YFFRLS + S+ + E N++ ++ +S L D +SR Sbjct: 198 KTSKHYFFRLS--DPRCESFLREWVSGLAQPEATNKMREWLGDAGESKLADWDISRDAPY 255 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILR 269 +G +IP P YVW+DA Y + L +G W H IGKDIL Sbjct: 256 FGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGIDFDAWIRPGSKAEQYHFIGKDILY 315 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328 FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LRY+ Sbjct: 316 FHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYY 375 Query: 329 LVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ A +D + D + RVN+DL N+ SR+ ++K +DG + + + Sbjct: 376 FAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAMN 431 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445 +++ + +I + + + RAL + L EV+ Y D KPW+L K N Sbjct: 432 HPLVAKLRDAIPQIAASYEAREYGRALRHTMELADEVNAYVDGAKPWDLAKDPANAVALH 491 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLA 470 V++E R L++ L+ +P++A Sbjct: 492 ETCSVSLEAFRLLSLALKPVMPRVA 516 >gi|256842391|ref|ZP_05547894.1| methionyl-tRNA synthetase [Parabacteroides sp. D13] gi|256735998|gb|EEU49329.1| methionyl-tRNA synthetase [Parabacteroides sp. D13] Length = 679 Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 134/515 (26%), Positives = 236/515 (45%), Gaps = 43/515 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K ++ I+TA+ Y N HIGH A + AD+ AR+ RL G +VL G+DEHG I Sbjct: 3 KHFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + I++D + RTT HH ++ + DKG+ Sbjct: 63 RAKKEGITPQDVVDRYHGIIKKSFEEFGITFDIYSRTTSATHHQMASDFFRTLYDKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------- 160 + +Y + + D +E G + +P + Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGS 182 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + ++ L ++ L + E H E+ + + S++ GL+ ++SR Sbjct: 183 KPVMRETKHWYLPLDKWEPFLRKWILEDHKEWKPNV--YGQCKSWLDMGLQPRAVSRD-L 239 Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267 DWGI +P + ++YVW DA Y++ T L PD + W D +H IGKD Sbjct: 240 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETKMVHFIGKDN 296 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324 + FH I +P+ L + + LP+ V ++ F+ +G+KIS S + E + ++ D Sbjct: 297 IVFHCIVFPSMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDV 356 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N +L +GN V+R++ + K ++G +P G T Sbjct: 357 LRYVLTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTDKYFEGKVPAAGELT 416 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 + D L + V + + + A + ++L ++Y +PW+L KT+ R Sbjct: 417 DYDRQTLKDFADVKENVERLLDTYHFRDAQKEAMNLARIGNKYLADMEPWKLAKTDMPRV 476 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +T++ + +++ LAI + F+P K+ +L V Sbjct: 477 ATIMNIALQITANLAIAFEPFLPFSMEKLNKMLNV 511 >gi|262384701|ref|ZP_06077834.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_33B] gi|262293682|gb|EEY81617.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_33B] Length = 679 Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 134/515 (26%), Positives = 236/515 (45%), Gaps = 43/515 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K ++ I+TA+ Y N HIGH A + AD+ AR+ RL G +VL G+DEHG I Sbjct: 3 KHFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + I++D + RTT HH ++ + DKG+ Sbjct: 63 RAKKEGITPQDVVDRYHGIIKKSFEEFGITFDIYSRTTSATHHQMASDFFRTLYDKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------- 160 + +Y + + D +E G + +P + Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGS 182 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + ++ L ++ L + E H E+ + + S++ GL+ ++SR Sbjct: 183 KPVMRETKHWYLPLDKWEPFLRKWILEDHKEWKPNV--YGQCKSWLDMGLQPRAVSRD-L 239 Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267 DWGI +P + ++YVW DA Y++ T L PD + W D +H IGKD Sbjct: 240 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETKMVHFIGKDN 296 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324 + FH I +P+ L + + LP+ V ++ F+ +G+KIS S + E + ++ D Sbjct: 297 IVFHCIVFPSMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDV 356 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N +L +GN V+R++ + K ++G +P G T Sbjct: 357 LRYVLTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTDKYFEGKVPVAGELT 416 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 + D L + V + + + A + ++L ++Y +PW+L KT+ R Sbjct: 417 DYDRQTLKDFADVKENVERLLDTYHFRDAQKEAMNLARIGNKYLADMEPWKLAKTDMPRV 476 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +T++ + +++ LAI + F+P K+ +L V Sbjct: 477 ATIMNIALQITANLAIAFEPFLPFSMEKLNKMLNV 511 >gi|150009383|ref|YP_001304126.1| methionyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503] gi|187647739|sp|A6LFP0|SYM_PARD8 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|149937807|gb|ABR44504.1| Methionyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503] Length = 679 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 134/515 (26%), Positives = 236/515 (45%), Gaps = 43/515 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K ++ I+TA+ Y N HIGH A + AD+ AR+ RL G +VL G+DEHG I Sbjct: 3 KHFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + I++D + RTT HH ++ + DKG+ Sbjct: 63 RAKKEGITPQDVVDRYHGIIKKSFEEFGITFDIYSRTTSATHHQMASDFFRTLYDKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------- 160 + +Y + + D +E G + +P + Sbjct: 123 EKTSEQYYDEEAKQFLADRYIMGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGS 182 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + ++ L ++ L + E H E+ + + S++ GL+ ++SR Sbjct: 183 KPVMRETKHWYLPLDKWEPFLRKWILEDHKEWKPNV--YGQCKSWLDMGLQPRAVSRD-L 239 Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267 DWGI +P + ++YVW DA Y++ T L PD + W D +H IGKD Sbjct: 240 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETKMVHFIGKDN 296 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324 + FH I +P+ L + + LP+ V ++ F+ +G+KIS S + E + ++ D Sbjct: 297 IVFHCIVFPSMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDV 356 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N +L +GN V+R++ + K ++G +P G T Sbjct: 357 LRYVLTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTDKYFEGKVPVAGELT 416 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 + D L + V + + + A + ++L ++Y +PW+L KT+ R Sbjct: 417 DYDRQTLKDFADVKENVERLLDTYHFRDAQKEAMNLARIGNKYLADMEPWKLAKTDMPRV 476 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +T++ + +++ LAI + F+P K+ +L V Sbjct: 477 ATIMNIALQITANLAIAFEPFLPFSMEKLNKMLNV 511 >gi|154493526|ref|ZP_02032846.1| hypothetical protein PARMER_02865 [Parabacteroides merdae ATCC 43184] gi|154086736|gb|EDN85781.1| hypothetical protein PARMER_02865 [Parabacteroides merdae ATCC 43184] Length = 679 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 134/515 (26%), Positives = 237/515 (46%), Gaps = 43/515 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ I+TA+ Y N HIGH A + AD+ AR+ RL G +VL G+DEHG I Sbjct: 3 KQFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + IS+D + RTT H ++ + DKG+ Sbjct: 63 RAKKEGITPQDVVDRYHGIIKKSFEEFGISFDIYSRTTSATHRQVASDFFRTLYDKGEFI 122 Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------- 160 + +Y + + D +E G + +P + Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLINPKSAISGS 182 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + ++ L ++ L + E H E+ + + S++ GL+ ++SR Sbjct: 183 QPVMKETKHWYLPLDKWEPFLRQWILEGHKEWKPNV--YGQCKSWLDMGLQPRAVSRD-L 239 Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267 DWGI +P + ++YVW DA Y++ T L P+ + W D +H IGKD Sbjct: 240 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPESWET--WWKDPETKMVHFIGKDN 296 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324 + FH I +PA L + + LP+ V ++ F+ +G+KIS S + E + ++ D Sbjct: 297 IVFHCIVFPAMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDV 356 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LRY L KD + + R N +L +GN V+R++ + K ++G +P G T Sbjct: 357 LRYVLTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTEKYFEGKVPAAGELT 416 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 + D L+ + V ++ + A + ++L ++Y +PW+L KT+ R Sbjct: 417 DYDRQTLTDFANVKADVERLLDTYHFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMARV 476 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +T++ + +++ LAI + F+P K+ +L V Sbjct: 477 ATIMNIALQITANLAIAFEPFLPFSMEKLNKMLNV 511 >gi|319760594|ref|YP_004124532.1| methionyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF] gi|318039308|gb|ADV33858.1| methionyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF] Length = 549 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 126/504 (25%), Positives = 222/504 (44%), Gaps = 44/504 (8%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +K+ ++ A+ Y N HIGH E I AD+ R+ R+ V F D HG I A Sbjct: 2 SNKKILVTCALPYANNSLHIGHMLEHIQADIWVRYQRMQNNTVYFICADDAHGTAIMLKA 61 Query: 63 QNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 Q + K+ + ++++ D +ISYD++ T K + + ++ K+ + G I Sbjct: 62 QQLNINPKIMISNIQKEHYKNCYD-FNISYDNYHSTHSKENRELLYEIYLKLKNNGLIKT 120 Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG------ 164 S Y + + + D + G + + A + P++ ++ + Sbjct: 121 RFISQLYDSKKKIFLPDRFIIGTCPKCHTSNQYGDNCEQCGAIYTPMELIDPKSVISGTT 180 Query: 165 --------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 +FF L + L + S +L E N++ + K GLK+ +SR + + Sbjct: 181 PITKKSKHFFFNLPIFTKMLQHWVYSG---VLQQEILNKIEEWFKLGLKEWDISRDSPYF 237 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269 G KIP+ YVW+DA Y+ T L N + FW H IGKDI+ Sbjct: 238 GFKIPNTGSKYFYVWMDATIGYMGTFKNLCKKNKNIFFEDFWDIHSKNELYHFIGKDIIY 297 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH+++WPA L + P +F HG + G KISKS G I + + D LRY+ Sbjct: 298 FHSLFWPAILEGSQFRKPTGIFVHGHVTLNGLKISKSKGAFIKANTYLSYLHSDYLRYYY 357 Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + ++N+D+ N I NL +RS S I + DG + + D Sbjct: 358 ATKLSSKINDIDLNFNDFFNKINSDIINKILNLAARSASFINQYNDGQLSS----KIEDP 413 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL--KKTNPDRAST 446 ++ + I + +N+ A+ ++SL E ++Y D PW + + A + Sbjct: 414 NLYNFFINFKHSIGKAFKNREFSEAMRSIMSLADEANKYIDQHSPWHIIHQIGEIKNAVS 473 Query: 447 VLYVTVEVIRQLAILLQAFVPKLA 470 + + +++ R L L+ +P L+ Sbjct: 474 IASMGIQLFRILMTYLKPVLPILS 497 >gi|134296619|ref|YP_001120354.1| methionyl-tRNA synthetase [Burkholderia vietnamiensis G4] gi|187647710|sp|A4JGW6|SYM_BURVG RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|134139776|gb|ABO55519.1| methionyl-tRNA synthetase [Burkholderia vietnamiensis G4] Length = 721 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 134/508 (26%), Positives = 219/508 (43%), Gaps = 47/508 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG I A+ Sbjct: 19 QILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLRAEME 78 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T K +D+ + D +S+D+F T + ++ + + G I + Sbjct: 79 GLTPKQLIDRVWAEHKRDFDSFGVSFDNFYSTDSDENRVLSEKIYVALKENGLIAEREIE 138 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161 Y E + D KG A QY ++ NP + Sbjct: 139 QAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTDLLNPYSVVSGATPVR 197 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTFD 215 +FFRLS + S+ + E N++ ++ ++ L D +SR Sbjct: 198 KTSTHHFFRLS--DPRCESFLRDWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDAPY 255 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILR 269 +G +IP P YVW+DA Y + L G W H IGKDIL Sbjct: 256 FGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERKGINFDAWVRPGATAEQYHFIGKDILY 315 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328 FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LRY+ Sbjct: 316 FHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYY 375 Query: 329 LVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ A +D + D + RVN+DL N+ SR+ ++K +DG + + + Sbjct: 376 FAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAMN 431 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445 +++ + I + + + RAL Q + L EV+ Y D KPWEL K N Sbjct: 432 HPLVAKLRSAIDSIAAHYEAREYSRALRQTMELADEVNAYVDGAKPWELAKDPANAVALH 491 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473 V++E R L++ L+ +P++A + Sbjct: 492 ETCSVSLEAFRLLSLALKPVMPRVAQAV 519 >gi|119356838|ref|YP_911482.1| methionyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266] gi|187647713|sp|A1BF81|SYM_CHLPD RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|119354187|gb|ABL65058.1| methionyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266] Length = 702 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 130/541 (24%), Positives = 246/541 (45%), Gaps = 63/541 (11%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++TA+ Y N H+GH A + AD+ R+ RL G +++ G+DEHG I A+ Sbjct: 5 KRTLVTTALPYANGPVHLGHLAGVYLPADLYVRYKRLKGDNIIHIGGSDEHGVPITLTAE 64 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ + VD+ D IS++ + RTT HH T R + +I +KG + Sbjct: 65 KEGISPRDVVDRYHGMNLDAFTKCGISFNYYGRTTSAVHHATAREFFSEIENKGMFTRKT 124 Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG-------- 164 ++ + + +D + G + +P++ + + Sbjct: 125 EKQFFDKKANRFLSDRYITGTCPICSNPDANGDQCEQCGTHLSPLELINPKSKLSDATPE 184 Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRKTF 214 ++F L +Q +L SY +SH + E R VI++ +K GL D +++R Sbjct: 185 LRETLHWYFPLGRFQSELESYVQSHDK-----EWRPNVINYTRTWLKQGLNDRAITRD-L 238 Query: 215 DWGIKIP-DDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD----LHVI 263 WGIK+P + P+ ++YVW DA+ Y++ T G ++W ++ I Sbjct: 239 SWGIKLPLETPEASGKVLYVWFDAVLGYISFTKEWAAQSGQPELWREYWQDPECRMINFI 298 Query: 264 GKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316 GKD + FH + +PA L++ N L V + F+ +G K SKS + + Sbjct: 299 GKDNVVFHTLMFPAILMAWNKGRKTDLYNLADNVPASEFMNFEGRKFSKSRNYAVYLGDF 358 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 +E+ D LRY + KD + + R N +LA+ +GN + RS+ +DG Sbjct: 359 LEKFPADTLRYCIAMNYPENKDSDFSWLDFQNRTNGELADTLGNFIKRSIDFTNSRFDGK 418 Query: 377 IPTPGAFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 +P T + I + L+++ + + A + + + +R+ +PW+ Sbjct: 419 VPC--ECTPEEWKIPGIDWKETLEKLDQAFEAFHFREATSLGMDIARTANRFLTESEPWK 476 Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495 + K++ + A+ + +++ + LA++L +P+ AN+I +L V +S+D +L Sbjct: 477 VIKSDREGAAKTMAISLNLCYALALVLYPVIPETANRILAMLGVE------KSIDDQLDS 530 Query: 496 G 496 G Sbjct: 531 G 531 >gi|281421486|ref|ZP_06252485.1| methionine--tRNA ligase [Prevotella copri DSM 18205] gi|281404558|gb|EFB35238.1| methionine--tRNA ligase [Prevotella copri DSM 18205] Length = 688 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 135/517 (26%), Positives = 238/517 (46%), Gaps = 52/517 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K ++ ++ A+ Y N HIGH A + AD+ R+ RL DV+F G+DEHG + Sbjct: 4 KNFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQDVVFIGGSDEHGVPVTI 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + IS+D + RTT H+ ++ + DKG + Sbjct: 64 RAKKEGITVQEVVDRYHNLIKKSFEDFGISFDIYSRTTSPTHNKFASDFFRTLYDKGVLE 123 Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----GADGQYYNA------------------QHNPV 157 + + + D + GA+G Y + ++NP Sbjct: 124 EKVEEQFCDEVTGEFLTDRNIVGTCPRCGAEGAYGDQCEKCGATLSPEELINPTNKNNPG 183 Query: 158 QWM---EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + + ++ L+ YQD L + E H E+ R V KS L D+ L + Sbjct: 184 HGLVKKPTKNWYLPLNKYQDWLKKWILEGHKEW------RTNVYGQCKSWL-DMDLQPRA 236 Query: 214 ----FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYL--DNPD--GSKAKFWPAD---- 259 DWGI +P + ++YVW DA Y++ T L +P+ G+ K+W Sbjct: 237 MTRDLDWGIPVPVEGADGKVLYVWFDAPIGYISNTKELCDAHPEKWGTWQKWWQDPETRL 296 Query: 260 LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 +H IGKD + FH I +P L + + LP V ++ F+ + +KIS S + E + Sbjct: 297 VHFIGKDNIVFHCIIFPTMLKAHGDYILPDNVPANEFLNLEDDKISTSRNWAVWLHEYLV 356 Query: 319 EV--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 ++ D LRY L KD + ++R N++L GN V+R++ + K + G+ Sbjct: 357 DLPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWGGV 416 Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 +P G E DE ++ V +++ + + A + ++L +RY +PW++ Sbjct: 417 VPACGELQEVDEKAIAEFKDVKEKVEQYLNVFKFREAQKEAMNLARIGNRYITECEPWKV 476 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 KT+P R T+L ++++++ LAI + F+P + K+ Sbjct: 477 WKTDPKRVETILNISLQLVANLAIAFEPFLPFSSEKL 513 >gi|206560985|ref|YP_002231750.1| methionyl-tRNA synthetase [Burkholderia cenocepacia J2315] gi|226710898|sp|B4E8E0|SYM_BURCJ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|198037027|emb|CAR52948.1| methionyl-tRNA synthetase [Burkholderia cenocepacia J2315] Length = 718 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 130/507 (25%), Positives = 221/507 (43%), Gaps = 45/507 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG I A+ Sbjct: 19 QILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYIGADDTHGTPIMLRAEKE 78 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T K +D+ + D +S+D+F T + ++ + + G I + Sbjct: 79 GLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSEKIYLALQEAGLIAEREIE 138 Query: 126 GWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME------------- 161 Y E + D E K G + + + + P + + Sbjct: 139 QAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPYSVVSGATPVRK 198 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTFDW 216 + YFFRLS + S+ + E N++ ++ ++ L D +SR + Sbjct: 199 TSKHYFFRLS--DPRCESFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDAPYF 256 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILRF 270 G +IP P YVW+DA Y + L +G W H IGKDIL F Sbjct: 257 GFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGIDFDAWIRPGSKAEQYHFIGKDILYF 316 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFL 329 H ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LRY+ Sbjct: 317 HTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYYF 376 Query: 330 VREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 ++ A +D + D + RVN+DL N+ SR+ ++K +DG + + + Sbjct: 377 AAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAMNH 432 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446 +++ + +I + + + RAL + L EV+ Y D KPW+L K N Sbjct: 433 PLVAKLRDAIPQIAASYEAREYGRALRHTMELADEVNAYVDGAKPWDLAKDPANAVALHE 492 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKI 473 V++E R L++ L+ +P++A + Sbjct: 493 TCSVSLEAFRLLSLALKPVMPRVAAAV 519 >gi|254251693|ref|ZP_04945011.1| Methionyl-tRNA synthetase [Burkholderia dolosa AUO158] gi|124894302|gb|EAY68182.1| Methionyl-tRNA synthetase [Burkholderia dolosa AUO158] Length = 901 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 135/511 (26%), Positives = 225/511 (44%), Gaps = 49/511 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG + A+ Sbjct: 198 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 257 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K +++ + D +S+D+F T + + ++ + + G I + Sbjct: 258 KEGLTPKQLIERVWAEHKRDFDSFGVSFDNFYTTDSEENRVLSEKIYVALKENGLIAERE 317 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161 Y E + D KG A QY ++ NP + Sbjct: 318 IEQAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATP 376 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 YFFRLS + S+ + E N++ ++ ++ L D +SR Sbjct: 377 VRKTSTHYFFRLS--DPRCESFLREWVGGLAQPEATNKMREWLGDAGEAKLADWDISRDA 434 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L +G W H IGKDI Sbjct: 435 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGIDFDAWVRPGSSAEQYHFIGKDI 494 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 495 LYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 554 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + D + RVN+DL N+ SR+ +LK +DG + + Sbjct: 555 YYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQD----SA 610 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 + ++ + +I + + + RAL + L EV+ Y D+ KPWEL K +P A Sbjct: 611 MNHPLVVKLRDAIPKIAAHYEAREYGRALRHTMELADEVNAYVDSAKPWELAK-DPANAV 669 Query: 446 TV---LYVTVEVIRQLAILLQAFVPKLANKI 473 + V++E R L++ L+ +P++A + Sbjct: 670 ALHETCSVSLEAFRLLSLALKPVMPRVAASV 700 >gi|145219579|ref|YP_001130288.1| methionyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265] gi|187647742|sp|A4SE77|SYM_PROVI RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|145205743|gb|ABP36786.1| methionyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265] Length = 702 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 136/565 (24%), Positives = 249/565 (44%), Gaps = 78/565 (13%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M + ++ ++TA+ Y N H+GH A + AD+ R+ RL G DV+ G+DEHG I Sbjct: 1 MPQFQRTLVTTALPYANGPVHLGHLAGVYLPADLFVRYKRLQGEDVIHIGGSDEHGVPIT 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + VD+ + IS+D + RT+ + HH T + + +I KG Sbjct: 61 ITAEKEGITPRDVVDRYHSMNLEAFKRCGISFDYYGRTSSELHHKTAQEFFLEIEGKGIF 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG---- 164 + +Y + +D V G + +P++ + + Sbjct: 121 ERKTEKLFYDASACRFLSDRYVTGTCPICGNTEANGDQCEQCGTHLSPLELINPKSKLSD 180 Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLS 210 ++F L +Q +L ++ SH + + R V+++ ++ GL D +++ Sbjct: 181 ATPELRETLHWYFPLGRFQKQLEAFVGSHDD-----DWRANVLNYTRTWLNQGLNDRAIT 235 Query: 211 RKTFDWGIKIP-DDPQY---IMYVWIDALTNYLTTT--------------GYLDNPDGSK 252 R WGIK+P DP+ ++YVW DA+ Y++ Y NPD Sbjct: 236 RD-LSWGIKVPLQDPEAEGKVLYVWFDAVLGYVSFAREWAVLQGSPDRWKEYWQNPDSRV 294 Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISK 305 F IGKD + FH + PA L++ N L V + F+ +G K SK Sbjct: 295 VNF-------IGKDNVVFHTLMLPAILMAWNEGRSDSIYNLADNVPASEFMNFEGRKFSK 347 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S + E +++ + LRY + KD + + R N +LA+ +GN + RS Sbjct: 348 SRNYAVYLGEFLDKFPAETLRYSIAMNYPENKDSDFSWTDFQNRTNGELADTLGNFIKRS 407 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 V ++G++P + E D S+ + + ++ E + A++ + + + Sbjct: 408 VDFTNSRFEGIVPHACSRQEWD-SLGINWADTIHQLDEAFEGFHFREAVSAAMDIARAAN 466 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 R+ +PW+ K + D A+ + +++ + L+I L +P+ AN+I +L Sbjct: 467 RFLTGAEPWKAIKEDRDGAARTMALSLNLCHALSIALYPVLPETANRIHSML-------G 519 Query: 486 FQ-SLDQRLKPGFMLHKTF-DPIFP 508 FQ +++ K G L+K+ +P P Sbjct: 520 FQGTIESLFKRGVPLYKSLTEPALP 544 >gi|167585788|ref|ZP_02378176.1| methionyl-tRNA synthetase [Burkholderia ubonensis Bu] Length = 724 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 134/507 (26%), Positives = 220/507 (43%), Gaps = 47/507 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG + A+ Sbjct: 16 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 75 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K +D+ + D +S+D+F T + ++ + + G I + Sbjct: 76 KEGLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSEQIYVALKENGLIAERE 135 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161 Y E + D KG A QY ++ NP + Sbjct: 136 IEQAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATP 194 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 + YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 195 VRKTSKHYFFRLS--DPRCEAFLRDWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 252 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L + G W H IGKDI Sbjct: 253 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRRGIDFDAWIRKGSTAEQYHFIGKDI 312 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 313 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 372 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + D + RVN+DL N+ SR+ +LK +DG + + Sbjct: 373 YYFAAKLNATMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQD----SA 428 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +++ + I + + + RAL + L EV+ Y D KPWEL K N Sbjct: 429 MNHPLVAKLRDAIPGIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWELAKDPANAVA 488 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLA 470 V++E R L++ L+ +P++A Sbjct: 489 LHETCSVSLEAFRLLSLALKPVMPRVA 515 >gi|105893564|gb|ABF76729.1| methionyl-tRNA synthetase [Burkholderia cenocepacia AU 1054] Length = 800 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 223/505 (44%), Gaps = 47/505 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG I A+ Sbjct: 101 QILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLRAEKE 160 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T K +D+ + D +S+D+F T + + ++ + + G I + Sbjct: 161 GLTPKQLIDRVWTEHKRDFDSFGVSFDNFYTTDSEENRVLSENIYLALQEAGLIAEREIE 220 Query: 126 GWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME------------- 161 Y E + D E K G + + + P + + Sbjct: 221 QAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATPVRK 280 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTFDW 216 + YFFRLS + S+ + E N++ ++ +S L D +SR + Sbjct: 281 TSKHYFFRLS--DPRCESFLREWVSGLAQPEATNKMREWLGDAGESKLADWDISRDAPYF 338 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILRF 270 G +IP P YVW+DA Y + L +G W H IGKDIL F Sbjct: 339 GFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGIDFDAWIRPGSKAEQYHFIGKDILYF 398 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFL 329 H ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LRY+ Sbjct: 399 HTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYYF 458 Query: 330 VREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 ++ A +D + D + RVN+DL N+ SR+ ++K +DG + + + Sbjct: 459 AAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAMNH 514 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV- 447 +++ + +I + + + RAL + L EV+ Y D KPW+L K +P A + Sbjct: 515 PLVAKLRDAIPQIAASYEAREYGRALRHTMELADEVNAYVDGAKPWDLAK-DPANAVALH 573 Query: 448 --LYVTVEVIRQLAILLQAFVPKLA 470 V++E R L++ L+ +P++A Sbjct: 574 ETCSVSLEAFRLLSLALKPVMPRVA 598 >gi|301312294|ref|ZP_07218211.1| methionine--tRNA ligase [Bacteroides sp. 20_3] gi|300829716|gb|EFK60369.1| methionine--tRNA ligase [Bacteroides sp. 20_3] Length = 679 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 137/516 (26%), Positives = 236/516 (45%), Gaps = 45/516 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K ++ I+TA+ Y N HIGH A + AD+ AR+ RL G +VL G+DEHG I Sbjct: 3 KHFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + VD+ + + I++D + RTT HH ++ + DKG+ Sbjct: 63 RAKKEGITPQDVVDRYHGIIKKSFEEFGITFDIYSRTTSATHHQMASDFFRTLYDKGEFI 122 Query: 121 KGCYSGWYS------------------LRDEAYYNDDEVYKGA--------DGQYYNAQH 154 + +Y +E Y D G D + + Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLKDPKSAISGS 182 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 PV E + ++ L ++ L + E H E+ + + S++ GL+ ++SR Sbjct: 183 KPVM-RETKHWYLPLDKWEPFLRKWILEDHKEWKPNV--YGQCKSWLDMGLQPRAVSRD- 238 Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKD 266 DWGI +P + ++YVW DA Y++ T L PD + W D +H IGKD Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETKMVHFIGKD 295 Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVD 323 + FH I +P+ L + + LP+ V ++ F+ +G+KIS S + E + ++ D Sbjct: 296 NIVFHCIVFPSMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQD 355 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 LRY L KD + + R N +L +GN V+R++ + K ++G +P G Sbjct: 356 VLRYVLTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTDKYFEGKVPAAGEL 415 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 T+ D L + V + + + A + ++L ++Y +PW+L KT+ R Sbjct: 416 TDYDRQTLKDFADVKENVERLLDTYHFRDAQKEAMNLARIGNKYLADMEPWKLAKTDMPR 475 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +T++ + +++ LAI + F+P K+ +L V Sbjct: 476 VATIMNIALQITANLAIAFEPFLPFSMEKLNKMLNV 511 >gi|241663776|ref|YP_002982136.1| methionyl-tRNA synthetase [Ralstonia pickettii 12D] gi|240865803|gb|ACS63464.1| methionyl-tRNA synthetase [Ralstonia pickettii 12D] Length = 709 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 140/533 (26%), Positives = 232/533 (43%), Gaps = 50/533 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ER ++ +++A+ Y N HIGH E I D+ RF R+ G + + D HG + Sbjct: 21 MSER-RILVTSALPYANGPIHIGHLVEYIQTDIWVRFQRMRGHETYYVGADDTHGTPVML 79 Query: 61 AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+T + +++ + + RD + L +S+D++ T + + C+ ++ K+ + G I Sbjct: 80 RAEKEGLTPRQLIERVWTEHKRDFDNFL-VSFDNYYSTDSDENKELCQNVYLKLKEAGLI 138 Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM-------- 160 +Y E + D E K GA QY A + P Sbjct: 139 DVREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSG 198 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210 E YFF+LS + ++ + E N++ ++ ++ L D +S Sbjct: 199 ATPVRKSSEHYFFKLS--DPRCENFLRDWVADLAQPEATNKMREWLGEEGEAKLSDWDIS 256 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIG 264 R +G +IP P YVW+DA Y + L G W H IG Sbjct: 257 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCAKRGLDFDAWINEHSTTEQYHFIG 316 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 KDIL FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + Sbjct: 317 KDILYFHTLFWPAMLKFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPE 376 Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ ++ A +D + D RVN+DL N+ SRS ++K ++G + Sbjct: 377 WLRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVSDAAL 436 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 ++ +I + + + +AL V+ L V+ + D +KPW+L K Sbjct: 437 ----GHPLMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAFVDTEKPWDLAKDEAH 492 Query: 443 RAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493 R V +E R LA+ L+ +P +I L V E ++S+D +L Sbjct: 493 REKLHAACSVALEAFRLLAVYLKPILPTTVERIEAFLNV--EPLTWRSIDSQL 543 >gi|303236923|ref|ZP_07323502.1| methionine--tRNA ligase [Prevotella disiens FB035-09AN] gi|302483091|gb|EFL46107.1| methionine--tRNA ligase [Prevotella disiens FB035-09AN] Length = 687 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 127/520 (24%), Positives = 245/520 (47%), Gaps = 43/520 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ ++ A+ Y N HIGH A + +D+ R+ RL +VLF G+DEHG I Sbjct: 4 KKFKRTTVTAALPYANGGVHIGHLAGVYVPSDIYVRYLRLKKQEVLFVGGSDEHGVPITL 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + D+ + +D + IS+D + RTT + HH ++K+ D+G + Sbjct: 64 RAKKEGITPQEVCDRYHKMIKDSFEEFGISFDVYSRTTSETHHKFASDFFRKLYDEGKLI 123 Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWME-------- 161 + Y + + D +E G + + +P++ + Sbjct: 124 EKESEQLYDEEAKQFLADRYVMGECPHCHNENAYGDQCEKCGSDLSPMELINPHSTISGS 183 Query: 162 ------EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + ++ L+ YQ+ L + H E+ + + S++ L+ +++R Sbjct: 184 KPVVKTTKNWYLPLNDYQEWLKQWILNDHKEWRPNV--YGQCKSWLDMDLQPRAMTRD-L 240 Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYL--DNPD--GSKAKFWPAD----LHVIG 264 +WGI +P + ++YVW DA Y++ T L NP+ G K+W D +H IG Sbjct: 241 NWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDSNPERFGKWEKWWQDDETRLVHFIG 300 Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--G 321 KD + FH I +P+ L + + LP V S+ F+ + +KIS S + E + + Sbjct: 301 KDNIVFHCIIFPSMLKAHGDYILPDNVPSNEFLNLENDKISTSRNWAVWLHEYLVDFPNK 360 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D LRY L KD + ++R N++L GN V+R++ + K + G++P G Sbjct: 361 QDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTQKYWGGIVPACG 420 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 + D + V +++ + A + ++L +RY +PW++ KT+P Sbjct: 421 ELQDVDRQTIQEFKDVKEKVESYLDVFKFREAQKEAMNLARIGNRYITECEPWKVWKTDP 480 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 R T+L ++++++ L+I + F+P + ++ +++ +A+ Sbjct: 481 KRVETILNISLQLVANLSIAFEPFLPFSSKELRNLINLAE 520 >gi|302346007|ref|YP_003814360.1| methionine--tRNA ligase [Prevotella melaninogenica ATCC 25845] gi|302149259|gb|ADK95521.1| methionine--tRNA ligase [Prevotella melaninogenica ATCC 25845] Length = 687 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 134/524 (25%), Positives = 237/524 (45%), Gaps = 51/524 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ ++ A+ Y N HIGH A + AD+ R+ RL +V F G+DEHG I Sbjct: 4 KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKREVAFIGGSDEHGVPITI 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + D+ + +D + IS+D + RTT + HH ++K+ D G + Sbjct: 64 RAKKEGITPQDVCDRYHKLIKDSFEEFGISFDIYSRTTSETHHKFASDFFRKLYDDGKLV 123 Query: 121 KGCYSGWYSLRDEAYYND----DEVYKGADGQYYNAQ----------------HNPVQWM 160 + +Y + D E + Y Q H+ + Sbjct: 124 EKESEQYYDEEAHQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTISGS 183 Query: 161 E-----EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213 + + ++ L+ YQ+ L + E H E+ R V KS L D+ L + Sbjct: 184 QPVIKRTKNWYLPLNDYQEWLKQWILEDHKEW------RPNVYGQCKSWL-DMDLQPRAM 236 Query: 214 ---FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----L 260 DWGI +P + ++YVW DA Y++ T L D G+ K+W + Sbjct: 237 TRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCEKDPEHFGNWQKWWQDPETRIV 296 Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE- 318 H IGKD + FH + +P L + + LP V S+ F+ + +KIS S + E + Sbjct: 297 HFIGKDNIVFHCLIFPTMLKAHGDYILPDNVPSNEFLNLEDDKISTSKNWAVWLHEYLRD 356 Query: 319 -EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E D LRY L KD + ++R N++L GN V+R++ + K ++G++ Sbjct: 357 FEGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWNGVV 416 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G E D + V ++ + A + ++L ++Y +PW+L Sbjct: 417 PACGELEEIDRQTIQEFKDVKAKVEAYLDIFKFREAQKEAMNLARIGNKYIAETEPWKLW 476 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 KT+P R T+LY++++++ L+I + F+P + K+ +++ + + Sbjct: 477 KTDPKRVETILYISLQLVANLSIAFEPFLPFSSKKLREMINMTE 520 >gi|163858414|ref|YP_001632712.1| methionyl-tRNA synthetase [Bordetella petrii DSM 12804] gi|163262142|emb|CAP44444.1| metG [Bordetella petrii] Length = 691 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 148/560 (26%), Positives = 245/560 (43%), Gaps = 73/560 (13%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 L+++TA+ Y N HIGH E I AD+ R R+ G V F D HG I A+ G Sbjct: 5 LFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEKEG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH----HDTCRILW-------KKISD 115 ++ + V + + D I +D + T + D R L + I Sbjct: 65 ISPQELVARYAAERPRYLDGFHIRFDHWHSTDSAENVALSQDIYRALQAANLIETRAIEQ 124 Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------------E 161 D KG + ++ E + G + A + P + Sbjct: 125 FYDPVKGMFLADRYIKGECPKCHAKDQYGDSCEVCGAVYAPTDLINPYSALTGATPVLKS 184 Query: 162 EEGYFFRLSAYQD-KLLSYYESHPEFILPIERRNEVISFVK---------SGLKDLSLSR 211 E +FF+LS + + L ++ + + EV + + + L D +SR Sbjct: 185 SEHFFFKLSDPRCVEFLQHWTTGVNAAGNKHLQPEVQAKTREWLGGDDGQAKLGDWDISR 244 Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG-----------YLDNPDGSKAKFWPADL 260 +GI+IPD P YVW+DA YL + L +P GS + + Sbjct: 245 DAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAKQGLDFDALLDPQGSTEQ-----V 299 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 H IGKDI+ FHA++WPA L A P + HGFI GEK+SKS G I P+ + ++ Sbjct: 300 HFIGKDIIYFHALFWPAMLKFAGRKTPDALNVHGFITVSGEKMSKSRGTGISPLRYL-DI 358 Query: 321 GVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 G++A LRY++ ++ A +D ++ D RVN+DL N+ SR+ + I K +DG + Sbjct: 359 GMNAEWLRYYIAAKLNARVEDIDFNPDDFVARVNSDLVGKYVNIASRAANFITKHFDGAL 418 Query: 378 PTPGAFTESDESILSV--CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 E D + LS +R + IR + + +RA+ ++++ +++ FD +PW Sbjct: 419 A-----YEGDTAALSAEFAARA-ESIRAAFEAREYNRAIREIMAYADGINQAFDTAQPWV 472 Query: 436 LKK-------TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-- 486 L K R + ++ + L+++L +P LAN++ LF A + + Sbjct: 473 LAKGIGAADAAQKARLQDICSRSLAGFKALSVMLAPVLPALANRVARELFGAAQPFTWAD 532 Query: 487 -QSLDQRLKPGFMLHKTFDP 505 +L +R+ P L + DP Sbjct: 533 AAALPERVAPFKHLMQRVDP 552 >gi|260593431|ref|ZP_05858889.1| methionine--tRNA ligase [Prevotella veroralis F0319] gi|260534707|gb|EEX17324.1| methionine--tRNA ligase [Prevotella veroralis F0319] Length = 687 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 134/520 (25%), Positives = 236/520 (45%), Gaps = 51/520 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ ++ A+ Y N HIGH A + AD+ R+ RL DV+F G+DEHG I Sbjct: 4 KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKRDVIFIGGSDEHGVPITI 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + D+ + +D + IS+D + RTT K H+ ++K+ D G + Sbjct: 64 RAKKEGITPQDVCDRYHKLIKDSFEEFGISFDIYSRTTSKTHNKFASDFFRKLYDDGKLV 123 Query: 121 KGCYSGWYSLRDEAYYND----DEVYKGADGQYYNAQ-------------HNPVQWM--- 160 + +Y + D E + Y Q NP + Sbjct: 124 EQESEQYYDEEAHQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTISGS 183 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213 + + ++ L+ YQ+ L + E H E+ R V KS L D+ L + Sbjct: 184 QPVIKKTKNWYLPLNNYQEWLKQWILEDHKEW------RPNVYGQCKSWL-DMDLQPRAM 236 Query: 214 ---FDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----L 260 DWGI +P ++YVW DA Y++ T L + D G+ K+W + Sbjct: 237 TRDLDWGIPVPVKGAEGKVLYVWFDAPIGYISNTKELCDSDPEHFGNWQKWWQDPETRLV 296 Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE- 318 H IGKD + FH + +P L + + LP V ++ F+ + KIS S + E + Sbjct: 297 HFIGKDNIVFHCLIFPTMLKAHGDYILPDNVPANEFLNLEDNKISTSKNWAVWLHEYLRD 356 Query: 319 -EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E D LRY L KD + ++R N++L GN V+R++ + K ++G++ Sbjct: 357 FEGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWNGIV 416 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G E D + V ++ ++ A + ++L ++Y +PW++ Sbjct: 417 PACGELQEVDRLTIQEFKDVKAKVEAYLEVFKFREAQKEAMNLARIGNKYITECEPWKVW 476 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 KT+P R T+LY++++++ L+I + F+P + K+ +++ Sbjct: 477 KTDPKRVETILYISLQLVANLSIAFEPFLPFSSKKLRELI 516 >gi|241667151|ref|ZP_04754729.1| methionyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254875704|ref|ZP_05248414.1| methionyl-tRNA synthetase metG [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254841725|gb|EET20139.1| methionyl-tRNA synthetase metG [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 673 Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 120/500 (24%), Positives = 221/500 (44%), Gaps = 42/500 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I +D+ RF +L G + +F G+D HG I A++ Sbjct: 3 KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNECIFVCGSDTHGTPIMLKAKSL 62 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + V++ S N + +I +D++ T + + ++ K++ + I K + Sbjct: 63 GITPEELVEKYSNNHQKDFLSFEIEFDNYHSTHSPINKEIVEDIYGKLNAQKLISKKEIA 122 Query: 126 GWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM-------------- 160 Y + + D E G + A ++P + + Sbjct: 123 QAYDPEAKMFLPDRFVKGTCPKCKTEDQYGDSCEVCGATYDPTELINPKSVVSGKAPIQK 182 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E +FF L + + + + ES+ +L E N++ + + GL+ +SR +G I Sbjct: 183 NSEHFFFDLPSLEKNIKDWIESNK--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGFAI 240 Query: 221 P-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD------LHVIGKDILRFHA 272 P D Q YVW+DA Y+ + Y D + +FW + H IGKDI+ FHA Sbjct: 241 PGTDEQKFFYVWLDAPMGYIASFRDYCDKNNVDFNEFWGDNSCESELYHFIGKDIIYFHA 300 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L S P VF++GF+ G+K+SKS G I ++ + LRY+ Sbjct: 301 LFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASR 360 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + D + + + N+D+ + N+ SR I K +D + A D+ + Sbjct: 361 LTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL----ANEVLDKELE 416 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLY 449 ++ + I E + + A+ +++L + +++ D KPW+L K + V Sbjct: 417 KEFAKSHRAITEAFEKREFAHAVRLIMTLADKANQFIDHHKPWQLAKEEGQEQKVHQVCS 476 Query: 450 VTVEVIRQLAILLQAFVPKL 469 + + + L L+ VP + Sbjct: 477 QGINMFKVLVAYLKPIVPSI 496 >gi|110834460|ref|YP_693319.1| methionyl-tRNA synthetase [Alcanivorax borkumensis SK2] gi|122959435|sp|Q0VP51|SYM_ALCBS RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|110647571|emb|CAL17047.1| Methionyl-tRNA synthetase [Alcanivorax borkumensis SK2] Length = 686 Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 130/502 (25%), Positives = 227/502 (45%), Gaps = 45/502 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ RF +L G ++ D HG I A+ Sbjct: 14 KILVTSALPYANGPIHLGHLLEYIQTDIWVRFQKLRGQQCIYVCADDAHGTAIMLKAEEN 73 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTE-----------KRHHDTCRILWKKI 113 GVT + + Q + + RD AD +++D++ T +R+ D IL K I Sbjct: 74 GVTPEQQIAQVKADHERDFAD-FQVNFDNYYSTHSPENRALSEMVFQRNKDAGYILEKTI 132 Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173 + D KG + ++ E G + + A + P + +E + + Sbjct: 133 TQLYDPQKGMFLADRFVKGTCPKCKSEDQYGDNCEVCGATYTPAELIEPYSSVSGATPVE 192 Query: 174 DKLLSYYESHPEFILPIER-------RNEVISFVKSGLKDLS---LSRKTFDWGIKIPDD 223 + + P+F + + +V + ++ ++DL +SR+ +G +IP Sbjct: 193 KETTQLFFDLPKFEALLREWTRSGALQEQVANKLQEWIEDLQPWDISREAPYFGFEIPGY 252 Query: 224 PQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW----PADL-HVIGKDILRFHAIYWPA 277 P YVW+DA Y+ + Y D S +W A+L H IGKDI+ FH ++WPA Sbjct: 253 PGKYFYVWLDAPIGYMASFQNYCDREGLSFDDYWGKESTAELYHFIGKDIINFHGLFWPA 312 Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337 L A L P ++SHGF+ G K+SKS G I ++ + + LRY+ +++ Sbjct: 313 MLDGAGLRKPTAIYSHGFVTVNGAKMSKSRGTFIKARTYLDHLSPEYLRYYFAAKLSSRV 372 Query: 338 DGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396 D F + + +RVN+DL + N+ SR+ + + K + G + TE D +L R Sbjct: 373 DDFDLNLEDFAQRVNSDLVGKLVNIASRTGNFV-KKFGGTLS-----TELDNMML---VR 423 Query: 397 VLQE----IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYV 450 +QE I + + + +A+ ++++L + Y + PW L K + Sbjct: 424 EVQEAGPRIADFYEKREFGKAMREIMALADHANVYIADKAPWSLSKEEGKEQEVLAICST 483 Query: 451 TVEVIRQLAILLQAFVPKLANK 472 + V R L I L+ +P LA + Sbjct: 484 AINVFRLLVIYLKPVLPALAER 505 >gi|325523984|gb|EGD02180.1| methionyl-tRNA synthetase [Burkholderia sp. TJI49] Length = 718 Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 132/510 (25%), Positives = 221/510 (43%), Gaps = 47/510 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG + A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K +++ + D +S+D+F T + + ++ + + G I + Sbjct: 77 KEGLTPKQLIERVWTEHKRDFDSFGVSFDNFYSTDSEENRVLSEKIYLALKENGLIAERE 136 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161 Y E + D KG A QY ++ NP + Sbjct: 137 IEQAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATP 195 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 YFFRLS + S+ + E N++ ++ ++ L D +SR Sbjct: 196 VRKTSTHYFFRLS--DPRCESFLREWVGGLAQPEATNKMREWLGDAGEAKLADWDISRDA 253 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267 +G +IP P YVW+DA Y + L +G W H IGKDI Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGVDFDAWIRPGSTAEQYHFIGKDI 313 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ ++K +DG + + Sbjct: 374 YYFAAKLNATMEDLDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SA 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +++ + +I + + RAL + L EV+ Y D KPWEL K N Sbjct: 430 MNHPLVAKLRDAIPQIAAQYEAREYGRALRHTMELADEVNAYVDGAKPWELAKDPANAVA 489 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 V++E R L++ L+ +P++A + Sbjct: 490 LHETCSVSLEAFRLLSLALKPVMPRVAEAV 519 >gi|284164098|ref|YP_003402377.1| methionyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511] gi|284013753|gb|ADB59704.1| methionyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511] Length = 705 Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 120/511 (23%), Positives = 223/511 (43%), Gaps = 55/511 (10%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N HIGH I AD +R G + + G+D HG +A A+ GV Sbjct: 16 VTCGLPYANGDLHIGHLRGYIGADAFSRALETLGQETAYVCGSDMHGTPVAVNAEQQGVD 75 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + F + + ++ +D++ T ++ + + + + + + ++G IY+ Y Sbjct: 76 PEDFALDWHEQYEETFPQFNVEFDNYGHTHDETNTELTQEIVRTLDEEGYIYEKEIQVAY 135 Query: 129 SLRDEAYYND----------------DEVYKGADGQYYNAQ---------HNPVQWMEEE 163 + Y D DE +G + NP ++ E Sbjct: 136 DPDADQYLPDRYVEGTCPYCGEKARGDECDEGCQRHLEPGEVEDPTSTITGNPAEYRERT 195 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIE----RRNEVISFVKSGLKDLSLSRKTFDWGIK 219 FF +S + D L EF+ +E RN+ +++ GL+D ++R DWGI Sbjct: 196 HKFFEVSEFADFLT-------EFLDGLEGTSNARNQPRQWIEDGLQDWCITRD-MDWGID 247 Query: 220 IP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPAD---LHVIGKDI 267 P D+ + ++YVW+DA Y+ +T G+ + W D +H+IG+DI Sbjct: 248 YPTAEGEDESELVLYVWVDAPIEYVASTKQYSERVGTDEFDWEQVWKGDGEIMHIIGRDI 307 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 ++ H I+WPA L P+ + + GFI G+ +S S I E ++E D LR Sbjct: 308 IQHHTIFWPAMLEGVGYNKPRGIAATGFITINGKGLSTSRNRAIWAKEYLDEGFHPDLLR 367 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 Y+L +D + D +++VN +L +GN RS+ ++Y+G TP T+ Sbjct: 368 YYLTTTGGLQQDVDFSWDAFQEKVNGELVGTVGNFWYRSLLFAYRNYEG---TP--ETDV 422 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 E + + + RE++ + + L + Y +PW+L P++A+ Sbjct: 423 SEEVRERIEGAIGDARESVNDYDLRGIGGAATELAQFGNEYIQRNEPWKLTDDEPEKAAQ 482 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V+ V++ + + +L++ P A +++ L Sbjct: 483 VIRDCVQIAKAVGVLIEPIAPDKAQNLWEQL 513 >gi|168483129|ref|ZP_02708081.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|172043369|gb|EDT51415.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] Length = 545 Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 126/505 (24%), Positives = 233/505 (46%), Gaps = 41/505 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N HIGHA ++ D+LAR++R G +VL+ +G+D +G I+ A+ Sbjct: 3 IFIGGAWPYANGSLHIGHAAALLPGDILARYYRQKGEEVLYVSGSDCNGTPISIRAKKEN 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + K D + F++ + L +YD + RT HH+ + L+ ++ +K +Y Sbjct: 63 KSVKEIADFYHKEFKETFEKLGFTYDLYSRTDSPLHHEIVQELFLQLYEKKFLYTKKIKQ 122 Query: 127 WYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWM--------------EE 162 Y D + D V +G +A +P+ + E Sbjct: 123 LYCTFDNQFLPDRFVEGKCPNCGTHLRGDQCDNCSAILDPIDLVDKRCSICSNEPEVRET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV---ISFVKSGLKDLSLSRKTFDWGIK 219 E +++ S +Q+ L +Y E + R+N + +++ GL D +++R + GI Sbjct: 183 EHFYYVFSEFQNLLETYLNDAEETVR--WRKNAINLTKRYLREGLPDRAVTRDLPN-GIP 239 Query: 220 IPDDP--QYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFW---PADLHVIGKDILRFHAI 273 +P D +YVW +A+ Y T + + + FW +V GKD + FH I Sbjct: 240 VPIDGFRDKKIYVWFEAVAGYYTASVDWAQKLQNNITDFWNNRTKSYYVHGKDNIPFHTI 299 Query: 274 YWPAFLLSANL-PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 WPA L + PLP+ + S ++ + +KIS S I ++I++ D++RYFL Sbjct: 300 IWPAILSGLEIEPLPEYIISSEYLTLENKKISTSNNWAIWLNDIIKKYDADSIRYFLTIN 359 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 KD + N++L GN ++R++ I K ++ IPT + E + IL Sbjct: 360 APEMKDANFSWREFIYSHNSELLGSYGNFINRTLKFIEKYFESEIPT--KYLEGE--ILY 415 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + + +++ + +AL ++ + ++++D KPW L++++ ++ VL V Sbjct: 416 NLKELYTTVGNLVESGHMKQALEEIFEYIRSANKFYDDMKPWALRESDIEKCKEVLATCV 475 Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477 +I L +L F+P KI D+ Sbjct: 476 IIILNLGQMLNPFIPFSGKKIEDMF 500 >gi|289582256|ref|YP_003480722.1| methionyl-tRNA synthetase [Natrialba magadii ATCC 43099] gi|289531809|gb|ADD06160.1| methionyl-tRNA synthetase [Natrialba magadii ATCC 43099] Length = 717 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 124/512 (24%), Positives = 230/512 (44%), Gaps = 57/512 (11%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N HIGH I AD +R G + + +G+D HG +A A+ GV+ Sbjct: 20 VTCGLPYANGDLHIGHLRGYIGADAFSRALETLGQETAYVSGSDMHGTPVAVNAEEEGVS 79 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + F + + + ++ +D++ T ++ + + + + + + D+G +Y+ Y Sbjct: 80 PEEFAMEWHEQYEETFPKFNVDFDNYGHTHDETNTEFTQEIVRTLDDEGYVYEKEIQVAY 139 Query: 129 SLRDEAYYND----------------DEVYKGADGQYYNAQ---------HNPVQWMEEE 163 + Y D DE +G + N ++ + Sbjct: 140 DPDADQYLPDRYVEGTCPYCGEKARGDECDEGCQRHLEPGEVEDPTSTITGNAAEYRDRT 199 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIE----RRNEVISFVKSGLKDLSLSRKTFDWGIK 219 FF +S + D L EF+ +E RN+ +++ GL+D L+R +WGI Sbjct: 200 HKFFEVSEFADYLT-------EFLDGLEGTSNARNQPRQWIEEGLQDWCLTRD-MEWGID 251 Query: 220 IPDD-----PQYIMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPAD---LHVIGKDI 267 P+ ++YVW+DA Y+ +T + G+ + W D +HVIG+DI Sbjct: 252 YPNGDSETTEDIVLYVWVDAPVEYIASTKQYADRVGTDEYDWERVWKDDGDIVHVIGRDI 311 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 ++ H I+WPA L A P+ V + GFI G+ +S S I E +EE D LR Sbjct: 312 IQHHTIFWPAMLEGAGYNKPRAVAATGFITINGKGLSTSRNRAIWAKEYLEEGFHPDLLR 371 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 Y+L +D + D +++VN +L +GN RS+ ++Y+G TP A + Sbjct: 372 YYLTTTGGLQQDVDFSWDAFQEKVNGELVGTVGNFWYRSLLFAYRNYEG---TPEA--DV 426 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAS 445 E + + + RE + N R + Q + +++ + Y +PW+L +P++A+ Sbjct: 427 SEEVAERIKGAIGQTREAV-NDYSLRGIGQAATQLAQFGNEYIQRNEPWKLTDDDPEQAA 485 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V+ V++ + + +LL+ P A +++ L Sbjct: 486 QVIRDCVQIAKAVGVLLEPIAPDKAQALWEQL 517 >gi|113868900|ref|YP_727389.1| methionyl-tRNA synthetase [Ralstonia eutropha H16] gi|122946656|sp|Q0K7K0|SYM_RALEH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|113527676|emb|CAJ94021.1| Methionyl-tRNA synthetase [Ralstonia eutropha H16] Length = 686 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 140/536 (26%), Positives = 237/536 (44%), Gaps = 64/536 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N Q HIGH E I D+ RF R+ G +V + D HG + A+ Sbjct: 5 RILVTSALPYANGQIHIGHLVEYIQTDIWVRFQRMMGNEVYYVGADDTHGTPVMLRAEKE 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T K +D+ + D +S+D++ T + + + C ++ + + I + Sbjct: 65 GITPKALIDRVWTEHKRDFDSFLVSFDNYYSTDAEENRELCEKIYLALKAEDLIAEREVE 124 Query: 126 GWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME------- 161 ++ + D E K GA QY ++ NP + Sbjct: 125 QFFDPVKNMFLPDRFIKGECPKCGAKDQYGDSCEVCGTTYVPTDLKNPYSVVSGATPVRK 184 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-----KSGLKDLSLSRKTFD 215 YFF+LS + ++ + E N++ ++ S L D +SR Sbjct: 185 SSAHYFFKLS--DPRCETFLREWVADLAQPEAANKMQEWLGAEGEASTLSDWDISRDAPY 242 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILR 269 +G +IP P YVW+DA Y + L G W H IGKDIL Sbjct: 243 FGFEIPGAPGKYFYVWLDAPIGYYASFQNLAAKKGIDFDAWVGPHSTAEQYHFIGKDILY 302 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328 FH ++WPA L + P VF+HGF+ G K+SKS G I ++ + + LRY+ Sbjct: 303 FHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYVDTGMNPEWLRYY 362 Query: 329 LVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ A +D + D RVN+DL N+ SR+ ++K ++G + D Sbjct: 363 FAAKLNASMEDLDLNLDDFIARVNSDLIGKYVNIASRAAGFLVKRFEGKV---------D 413 Query: 388 ESILSVCSRVLQEIRENMQNQLIH--------RALAQVISLVSEVDRYFDAQKPWELKKT 439 E+ L+ +L+++R+ Q+ H +AL V+ L V+ + D +KPWEL K Sbjct: 414 EAALA--HPLLEQLRQ-AAPQVAHLYEAREYSKALRLVMELTDAVNAFVDTEKPWELAKD 470 Query: 440 NPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493 RA+ V++E R L + L+ VP +A + L V E ++++D++L Sbjct: 471 ENKRAALHAACSVSLEAFRLLTVYLKPVVPNVAAGVERFLNV--EPLDWRAIDKQL 524 >gi|293607695|ref|ZP_06690026.1| methionine--tRNA ligase [Achromobacter piechaudii ATCC 43553] gi|292813833|gb|EFF72983.1| methionine--tRNA ligase [Achromobacter piechaudii ATCC 43553] Length = 702 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 152/572 (26%), Positives = 247/572 (43%), Gaps = 88/572 (15%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 L+++TA+ Y N HIGH E I AD+ R R+ G V F D HG I A+ G Sbjct: 19 LFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEKEG 78 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH----HDTCRIL-------WKKISD 115 +T + V + + + I +D + T + HD R L + I Sbjct: 79 ITPQALVARYAAERPQYLNGFHIRFDHWHSTDSAENVALSHDIYRALREQNLIETRSIEQ 138 Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------------E 161 D KG + ++ E + G + A + P + + Sbjct: 139 FYDPVKGMFLADRYIKGECPKCHAKDQYGDSCEVCGAVYAPTELINPYSALTGATPVLKS 198 Query: 162 EEGYFFRLSAYQDKLLSYYES-------------HPEFILPIERRNEVISFVKSGLKDLS 208 + +FF+LS + + + + PE +L R ++ L D Sbjct: 199 SDHFFFKLS--DPRCVEFLQQWTTGSNANGGKHLQPE-MLAKTREWLGAEDGEAKLGDWD 255 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG-----------YLDNPDGSKAKFWP 257 +SR +GI+IPD P YVW+DA YL + L +P+G+ + Sbjct: 256 ISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAVKGLDFDALLDPNGTTEQ--- 312 Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 +H IGKDI+ FHA++WPA L A P V HGFI GEK+SKS G I P+ + Sbjct: 313 --VHFIGKDIVYFHALFWPAMLKFAGRKTPDAVNVHGFITVSGEKMSKSRGTGISPLRYL 370 Query: 318 EEVGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374 E+G++A +RY++ ++ A +D ++ + RVN+DL N+ SR+ S I K +D Sbjct: 371 -ELGMNAEWMRYYIAAKLNARVEDVDFNPEDFIARVNSDLVGKYVNIASRAASFITKHFD 429 Query: 375 GMIPTPGAFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 G + G D + LS + + IR + + +RA+ ++++ +++ FD +P Sbjct: 430 GALGYSG-----DTAALSAEYAEQAESIRAAFEAREYNRAIREIMAYADRINQAFDTAQP 484 Query: 434 WELKK---TNPDRASTVLY----VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--- 483 W L K T D L ++ + L+++L +P LA ++ LF A Sbjct: 485 WVLAKGLATADDAQKAALQDICSRSLAGFKALSVMLAPVLPSLAERVALELFGAQAPFTW 544 Query: 484 ----------RCFQSLDQRLKPGFMLHKTFDP 505 F+ L QR++P ML F+P Sbjct: 545 ADAAVLPQRVAPFKHLMQRVEPQ-MLEDLFEP 575 >gi|21673797|ref|NP_661862.1| methionyl-tRNA synthetase [Chlorobium tepidum TLS] gi|25009343|sp|P59077|SYM_CHLTE RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|21646926|gb|AAM72204.1| methionyl-tRNA synthetase [Chlorobium tepidum TLS] Length = 703 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 132/541 (24%), Positives = 238/541 (43%), Gaps = 63/541 (11%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++TA+ Y N H+GH A + AD+ R+ RL G DV+ G+DEHG I A Sbjct: 6 KRTLVTTALPYANGPVHLGHLAGVYLPADIYVRYKRLCGHDVIHIGGSDEHGVPITITAD 65 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ + VD+ + IS+D + RT+ HH T R + +I KG K Sbjct: 66 KEGISPQEVVDRYHTMNAEAFAKCGISFDYYGRTSGPVHHQTAREFFLEIEKKGIFVKKT 125 Query: 124 YSGWYSLRDEAYYNDDEVY--------KGADG---QYYNAQHNPVQWMEEEG-------- 164 ++ + + +D + GA+G + +P + ++ + Sbjct: 126 EKQFFDPKAGRFLSDRYITGTCPVCKTPGANGDQCEQCGTHLSPTELIDPKSKLSDATPE 185 Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLSRKTF 214 ++F L YQ +L ++ E H + R+ V+++ ++ GL D +++R Sbjct: 186 LRETLHWYFPLGRYQKQLEAFVERHTG-----DWRSNVVNYSRTWLNQGLADRAITRD-L 239 Query: 215 DWGIKIPDDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PAD--LHV 262 WGI +P D + ++YVW DA+ Y++ T G A+ W P ++ Sbjct: 240 AWGISLPLDSEEAKGKVLYVWFDAVLGYISFTKEWAEKQGD-AELWRRYWQDPETRIINF 298 Query: 263 IGKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315 IGKD + FH + +PA L++ N L V + F+ +G K SKS + E Sbjct: 299 IGKDNVVFHTLMFPAILMAWNEGRSEGRYELADNVPASEFMNFEGRKFSKSRNYAVYLGE 358 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 +E D LRY + KD + + R N +LA+ +GN + RS+ + G Sbjct: 359 FLERFPADTLRYSIAMNYPENKDTDFSWSDFQNRTNGELADTLGNFIKRSIDFTNSRFGG 418 Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 +P D + + ++ A AQ + + +R+ +PW+ Sbjct: 419 QVPADIDLEAWDSLGIDWLAS-FGKLEAAYDGFHFREATAQTMEIARFANRFLTESEPWK 477 Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495 + K +P+ A + V++ + LA+L VP+ AN+I+ +L ++D+ ++P Sbjct: 478 VIKVDPEAAGRTMAVSLNLCHTLALLFWPIVPETANRIWKMLGFEG------TIDELVEP 531 Query: 496 G 496 G Sbjct: 532 G 532 >gi|148994771|ref|ZP_01823842.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|149013148|ref|ZP_01833965.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] gi|168488899|ref|ZP_02713098.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|182684197|ref|YP_001835944.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae CGSP14] gi|225858843|ref|YP_002740353.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 70585] gi|237650047|ref|ZP_04524299.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974] gi|237821801|ref|ZP_04597646.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2] gi|303256108|ref|ZP_07342128.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|303263003|ref|ZP_07348936.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|303264851|ref|ZP_07350767.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae BS397] gi|303266930|ref|ZP_07352807.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|303269096|ref|ZP_07354876.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|238691163|sp|B2IQ55|SYM_STRPS RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|254782873|sp|C1C727|SYM_STRP7 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|31087940|gb|AAO25636.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae] gi|147762999|gb|EDK69943.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] gi|147927037|gb|EDK78079.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|182629531|gb|ACB90479.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae CGSP14] gi|183572547|gb|EDT93075.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|225721595|gb|ACO17449.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 70585] gi|301802052|emb|CBW34784.1| Drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae INV200] gi|302596955|gb|EFL64081.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|302635830|gb|EFL66332.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|302641345|gb|EFL71712.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|302643563|gb|EFL73833.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|302645539|gb|EFL75770.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae BS397] gi|332073411|gb|EGI83890.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA17570] Length = 545 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 126/505 (24%), Positives = 233/505 (46%), Gaps = 41/505 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N HIGHA ++ D+LAR++R G +VL+ +G+D +G I+ A+ Sbjct: 3 IFIGGAWPYANGSLHIGHAAALLPGDILARYYRQKGEEVLYVSGSDCNGTPISIRAKKEN 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 + K D + F++ + L +YD + RT HH+ + L+ ++ +K +Y Sbjct: 63 KSVKEIADFYHKEFKETFEKLGFTYDLYSRTDSPLHHEIVQELFLQLYEKKFLYTKKIKQ 122 Query: 127 WYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWM--------------EE 162 Y D + D V +G +A +P+ + E Sbjct: 123 LYCTFDNQFLPDRFVEGKCPNCGTHSRGDQCDNCSAILDPIDLVDKRCSICSNEPEVRET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV---ISFVKSGLKDLSLSRKTFDWGIK 219 E +++ S +Q+ L +Y E + R+N + +++ GL D +++R + GI Sbjct: 183 EHFYYVFSEFQNLLETYLNDAEETVR--WRKNAINLTKRYLREGLPDRAVTRDLPN-GIP 239 Query: 220 IPDDP--QYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFW---PADLHVIGKDILRFHAI 273 +P D +YVW +A+ Y T + + + FW +V GKD + FH I Sbjct: 240 VPIDGFRDKKIYVWFEAVAGYYTASVDWAQKLQNNITDFWNNRTKSYYVHGKDNIPFHTI 299 Query: 274 YWPAFLLSANL-PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 WPA L + PLP+ + S ++ + +KIS S I ++I++ D++RYFL Sbjct: 300 IWPAILSGLEIEPLPEYIISSEYLTLENKKISTSNNWAIWLNDIIKKYDADSIRYFLTIN 359 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 KD + N++L GN ++R++ I K ++ IPT + E + IL Sbjct: 360 APEMKDANFSWREFIYSHNSELLGSYGNFINRTLKFIEKYFESEIPT--KYLEGE--ILY 415 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + + +++ + +AL ++ + ++++D KPW L++++ ++ VL V Sbjct: 416 NLKELYTTVGNLVESGHMKQALEEIFEYIRSANKFYDDMKPWALRESDIEKCKEVLATCV 475 Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477 +I L +L F+P KI D+ Sbjct: 476 IIILNLGQMLNPFIPFSGKKIEDMF 500 >gi|296113614|ref|YP_003627552.1| methionyl-tRNA synthetase [Moraxella catarrhalis RH4] gi|295921308|gb|ADG61659.1| methionyl-tRNA synthetase [Moraxella catarrhalis RH4] Length = 683 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 135/516 (26%), Positives = 226/516 (43%), Gaps = 47/516 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M K+ +++A+ Y N H+GH E I D+ R + G +V + D HG I Sbjct: 1 MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMGHNVTYVCADDAHGTAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AQ+ G+T + + + + +D A L I +D++ T + + ++ + G I Sbjct: 61 KAQDNGITPEEQIATVKASHEKDFAGFL-IDFDNYHSTHSSENQYFSQKIYTTLKQNGYI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME 161 + + ++ + D KG A QY YNA NP + Sbjct: 120 FTKDVEQLFD-TEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLS 178 Query: 162 EEG--------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 YFF L + + L ++ +S I N++ + +GL +SR Sbjct: 179 NSSPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSI--YNKLSEWFDAGLAPWDISRDA 236 Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVI 263 +G KIPD +P YVW+DA Y+ + L D D +++ D H I Sbjct: 237 PYFGFKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFI 296 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323 GKDI+ FH+++WPA L A P V +HGF+ GEK+SKS G I + + + Sbjct: 297 GKDIVYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPE 356 Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ +++ +D D + ++VN+DL + N+ SRS I K++DG + Sbjct: 357 YLRYYFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKL--SDE 414 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP- 441 TE +C+ EI + + + +++ + + Y D QKPW L K Sbjct: 415 LTEPKLIDEIICAG--DEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKAGKF 472 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D V V++ + +L I L +PKL+ + + L Sbjct: 473 DEVQKVCTVSLNIFHKLIIYLAPILPKLSEQAREFL 508 >gi|326568654|gb|EGE18725.1| methionyl-tRNA synthetase [Moraxella catarrhalis BC7] Length = 683 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 135/516 (26%), Positives = 226/516 (43%), Gaps = 47/516 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M K+ +++A+ Y N H+GH E I D+ R + G +V + D HG I Sbjct: 1 MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMGHNVTYVCADDAHGTAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AQ+ G+T + + + + +D A L I +D++ T + + ++ + G I Sbjct: 61 KAQDNGITPEEQIATVKASHEKDFAGFL-IDFDNYHSTHSSENQYFSQKIYTTLKQNGYI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME 161 + + ++ + D KG A QY YNA NP + Sbjct: 120 FTKDVEQLFD-TEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLS 178 Query: 162 EEG--------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 YFF L + + L ++ +S I N++ + +GL +SR Sbjct: 179 NSSPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSI--YNKLSEWFDAGLAPWDISRDA 236 Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVI 263 +G KIPD +P YVW+DA Y+ + L D D +++ D H I Sbjct: 237 PYFGFKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFI 296 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323 GKDI+ FH+++WPA L A P V +HGF+ GEK+SKS G I + + + Sbjct: 297 GKDIVYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPE 356 Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ +++ +D D + ++VN+DL + N+ SRS I K++DG + Sbjct: 357 YLRYYFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKL--SDE 414 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP- 441 TE +C+ EI + + + +++ + + Y D QKPW L K Sbjct: 415 LTEPKLIDEIICAG--DEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKAGKF 472 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D V V++ + +L I L +PKL+ + + L Sbjct: 473 DEVQKVCTVSLNIFHKLIIYLAPILPKLSEQAREFL 508 >gi|325266408|ref|ZP_08133085.1| methionine--tRNA ligase [Kingella denitrificans ATCC 33394] gi|324981851|gb|EGC17486.1| methionine--tRNA ligase [Kingella denitrificans ATCC 33394] Length = 684 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 137/508 (26%), Positives = 226/508 (44%), Gaps = 45/508 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +R K+ +++A+ Y N H+GH E I D+ RF +L G + + D HG I Sbjct: 1 MTQR-KILVTSALPYANGSIHLGHMVEHIQTDIWVRFQKLRGHECYYCCADDTHGTPIML 59 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ G+T + +++ I YD++ T + ++ + G I Sbjct: 60 AAEKQGITPEEMIEKTHAEHLADFTGFGIGYDNYYSTHSPENKKFSEQIYLALKANGKIV 119 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY-------------------YNAQHN 155 + + + + D V KG A QY Y+A Sbjct: 120 GKTINQLFDPEKQMFLPDRFV-KGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSG 178 Query: 156 PVQWMEE-EGYFFRLSAYQDKLLSYY--ESHPEFILPIERRNEVISFVKSG-LKDLSLSR 211 M++ E +FF+LS D L + E++ L E N++ ++K G L D +SR Sbjct: 179 ATPVMKQTEHFFFKLSDCADYLKQWTAGETNGRAHLQPEALNKMNEWLKDGELSDWDISR 238 Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGK 265 +G +IPD+P YVW+DA Y+ + L + G +F+ D H IGK Sbjct: 239 DAPYFGFQIPDEPDKYFYVWLDAPVGYMASFQNLCDKIGLDFNEFFGKDSTAEMYHFIGK 298 Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324 DIL FHA++W A L + P +F+HGF+ G+K+SKS G I +E+ + + Sbjct: 299 DILYFHALFWTAMLEYSGHRAPTGIFAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 358 Query: 325 LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 +RY++ ++ +D + RVN+DL N+ SR+ I K + G + Sbjct: 359 MRYYIAAKLNSKIEDIDLNLQDFIARVNSDLVGKYINIASRASGFIHKKFAGSL-----H 413 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 S ++++ + I + +N+ +AL ++++L V+ Y DA KPWEL K Sbjct: 414 AVSGSALIARLTEKSDSIAADYENREYAKALREIMALADIVNEYVDANKPWELAKQEGME 473 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLAN 471 A + V E+I IL P L N Sbjct: 474 AR-LHEVCSELINAFKILTAYLAPVLPN 500 >gi|326560048|gb|EGE10443.1| methionyl-tRNA synthetase [Moraxella catarrhalis 46P47B1] Length = 683 Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 135/516 (26%), Positives = 226/516 (43%), Gaps = 47/516 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M K+ +++A+ Y N H+GH E I D+ R + G +V + D HG I Sbjct: 1 MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMGHNVTYVCADDAHGTAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AQ+ G+T + + + + +D A L I +D++ T + + ++ + G I Sbjct: 61 KAQDNGITPEEQIATVKASHEKDFAGFL-IDFDNYHSTHSSENQYFSQKIYTTLKQNGYI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME 161 + + ++ + D KG A QY YNA NP + Sbjct: 120 FTKDVEQLFD-TEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLS 178 Query: 162 EEG--------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 YFF L + + L ++ +S I N++ + +GL +SR Sbjct: 179 NSSPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSI--YNKLSEWFDAGLAPWDISRDA 236 Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVI 263 +G KIPD +P YVW+DA Y+ + L D D +++ D H I Sbjct: 237 PYFGFKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFI 296 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323 GKDI+ FH+++WPA L A P V +HGF+ GEK+SKS G I + + + Sbjct: 297 GKDIVYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPE 356 Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ +++ +D D + ++VN+DL + N+ SRS I K++DG + Sbjct: 357 YLRYYFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKL--SDE 414 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP- 441 TE +C+ EI + + + +++ + + Y D QKPW L K Sbjct: 415 LTEPKLIDEIICAG--DEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKAGKF 472 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D V V++ + +L I L +PKL+ + + L Sbjct: 473 DEVQKVCTVSLNIFHKLIIYLAPILPKLSEQAREFL 508 >gi|326559611|gb|EGE10025.1| methionyl-tRNA synthetase [Moraxella catarrhalis 7169] gi|326565529|gb|EGE15700.1| methionyl-tRNA synthetase [Moraxella catarrhalis 12P80B1] gi|326567709|gb|EGE17815.1| methionyl-tRNA synthetase [Moraxella catarrhalis BC1] gi|326568781|gb|EGE18851.1| methionyl-tRNA synthetase [Moraxella catarrhalis BC8] gi|326575031|gb|EGE24960.1| methionyl-tRNA synthetase [Moraxella catarrhalis O35E] Length = 683 Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 135/516 (26%), Positives = 226/516 (43%), Gaps = 47/516 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M K+ +++A+ Y N H+GH E I D+ R + G +V + D HG I Sbjct: 1 MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMGHNVTYVCADDAHGTAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AQ+ G+T + + + + +D A L I +D++ T + + ++ + G I Sbjct: 61 KAQDNGITPEEQIATVKASHEKDFAGFL-IDFDNYHSTHSSENQYFSQKIYTTLKQNGYI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME 161 + + ++ + D KG A QY YNA NP + Sbjct: 120 FTKDVEQLFD-TEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLS 178 Query: 162 EEG--------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 YFF L + + L ++ +S I N++ + +GL +SR Sbjct: 179 NSSPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSI--YNKLSEWFDAGLAPWDISRDA 236 Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVI 263 +G KIPD +P YVW+DA Y+ + L D D +++ D H I Sbjct: 237 PYFGFKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFI 296 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323 GKDI+ FH+++WPA L A P V +HGF+ GEK+SKS G I + + + Sbjct: 297 GKDIVYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPE 356 Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ +++ +D D + ++VN+DL + N+ SRS I K++DG + Sbjct: 357 YLRYYFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKL--SDE 414 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP- 441 TE +C+ EI + + + +++ + + Y D QKPW L K Sbjct: 415 LTEPKLIDEIICAG--DEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKAGKF 472 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D V V++ + +L I L +PKL+ + + L Sbjct: 473 DEVQKVCTVSLNIFHKLIIYLAPILPKLSEQAREFL 508 >gi|288803454|ref|ZP_06408886.1| methionine--tRNA ligase [Prevotella melaninogenica D18] gi|288334064|gb|EFC72507.1| methionine--tRNA ligase [Prevotella melaninogenica D18] Length = 687 Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 134/520 (25%), Positives = 234/520 (45%), Gaps = 51/520 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ ++ A+ Y N HIGH A + AD+ R+ RL +V F G+DEHG I Sbjct: 4 KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKREVAFIGGSDEHGVPITI 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + D+ + +D + IS+D + RTT + HH ++K+ D G + Sbjct: 64 RAKKEGITPQDVCDRYHKLIKDSFEEFGISFDIYSRTTSETHHKFASDFFRKLYDDGKLV 123 Query: 121 KGCYSGWYSLRDEAYYND----DEVYKGADGQYYNAQ----------------HNPVQWM 160 + +Y + D E + Y Q H+ + Sbjct: 124 EKESEQYYDEEAHQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTISGS 183 Query: 161 E-----EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213 + + ++ L+ YQ+ L + E H E+ R V KS L D+ L + Sbjct: 184 QPIIKRTKNWYLPLNDYQEWLKQWILEDHKEW------RPNVYGQCKSWL-DMDLQPRAM 236 Query: 214 ---FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----L 260 DWGI +P + ++YVW DA Y++ T L D G+ K+W + Sbjct: 237 TRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCEKDPEHFGNWQKWWQDPETRIV 296 Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE- 318 H IGKD + FH + +P L + + LP V S+ F+ + +KIS S + E + Sbjct: 297 HFIGKDNIVFHCLIFPTMLKAHGDYILPDNVPSNEFLNLEDDKISTSKNWAVWLHEYLRD 356 Query: 319 -EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E D LRY L KD + ++R N++L GN V+R++ + K ++G++ Sbjct: 357 FEGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWNGVV 416 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G E D + V ++ + A + ++L ++Y +PW+L Sbjct: 417 PACGELEEVDRQTIQEFKDVKAKVEAYLDIFKFREAQKEAMNLARIGNKYIAETEPWKLW 476 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 KT+P R T+LY +++++ L+I + F+P + K+ +++ Sbjct: 477 KTDPKRVETILYFSLQLVANLSIAFEPFLPFSSKKLREMI 516 >gi|149003959|ref|ZP_01828767.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] gi|147758018|gb|EDK65024.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] Length = 568 Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 126/506 (24%), Positives = 233/506 (46%), Gaps = 41/506 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + +I A Y N HIGHA ++ D+LAR++R G +VL+ +G+D +G I+ A+ Sbjct: 25 QFFIGGAWPYANGSLHIGHAAALLPGDILARYYRQKGEEVLYVSGSDCNGTPISIRAKKE 84 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 + K D + F++ + L +YD + RT HH+ + L+ ++ +K +Y Sbjct: 85 NKSVKEIADFYHKEFKETFEKLGFTYDLYSRTDSPLHHEIVQELFLQLYEKKFLYTKKIK 144 Query: 126 GWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWM--------------E 161 Y D + D V +G +A +P+ + E Sbjct: 145 QLYCTFDNQFLPDRFVEGKCPNCGTHSRGDQCDNCSAILDPIDLVDKRCSICSNEPEVRE 204 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV---ISFVKSGLKDLSLSRKTFDWGI 218 E +++ S +Q+ L +Y E + R+N + +++ GL D +++R + GI Sbjct: 205 TEHFYYVFSEFQNLLETYLNDAEETVR--WRKNAINLTKRYLREGLPDRAVTRDLPN-GI 261 Query: 219 KIPDDP--QYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW---PADLHVIGKDILRFHA 272 +P D +YVW +A+ Y T + + + FW +V GKD + FH Sbjct: 262 PVPIDGFRDKKIYVWFEAVAGYYTASVDWAQKLQNNITDFWNNRTKSYYVHGKDNIPFHT 321 Query: 273 IYWPAFLLSANL-PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 I WPA L + PLP+ + S ++ + +KIS S I ++I++ D++RYFL Sbjct: 322 IIWPAILSGLEIEPLPEYIISSEYLTLENKKISTSNNWAIWLNDIIKKYDADSIRYFLTI 381 Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 KD + N++L GN ++R++ I K ++ IPT + E + IL Sbjct: 382 NAPEMKDANFSWREFIYSHNSELLGSYGNFINRTLKFIEKYFESEIPT--KYLEGE--IL 437 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451 + + +++ + +AL ++ + ++++D KPW L++++ ++ VL Sbjct: 438 YNLKELYTTVGNLVESGHMKQALEEIFEYIRSANKFYDDMKPWALRESDIEKCKEVLATC 497 Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477 V +I L +L F+P KI D+ Sbjct: 498 VIIILNLGQMLNPFIPFSGKKIEDMF 523 >gi|254429828|ref|ZP_05043535.1| methionyl-tRNA synthetase [Alcanivorax sp. DG881] gi|196195997|gb|EDX90956.1| methionyl-tRNA synthetase [Alcanivorax sp. DG881] Length = 684 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 129/503 (25%), Positives = 226/503 (44%), Gaps = 47/503 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ RF +L G + D HG I A+ Sbjct: 14 KILVTSALPYANGPIHLGHLLEYIQTDIWVRFQKLRGQQCTYVCADDAHGTAIMLKAEEN 73 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTE-----------KRHHDTCRILWKKI 113 GVT + + Q + + RD AD +++D++ T +R+ D IL K I Sbjct: 74 GVTPEQQIAQVKADHERDFAD-FQVNFDNYYSTHSAENRALSEMVFQRNKDAGYILEKTI 132 Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173 + D KG + ++ E G + + A + P + ++ + + Sbjct: 133 TQLYDPQKGMFLADRFVKGTCPKCKSEDQYGDNCEVCGATYTPAELIDPYSSVSGATPVE 192 Query: 174 DKLLSYYESHPEFILPIER--------RNEVISFVKSGLKDLS---LSRKTFDWGIKIPD 222 + + P+F P+ R + +V + ++ ++DL +SR+ +G +IP Sbjct: 193 KETTQLFFDLPKF-EPLLREWTRSGALQEQVANKLQEWIEDLQPWDISREAPYFGFEIPG 251 Query: 223 DPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWP 276 P YVW+DA Y+ + Y D S +W D H IGKDI+ FH ++WP Sbjct: 252 YPGKYFYVWLDAPIGYMASFQNYCDREGLSFDDYWGKDSTAELYHFIGKDIINFHGLFWP 311 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 A L A L P ++SHGF+ G K+SKS G I ++ + + LRY+ +++ Sbjct: 312 AMLDGAGLRKPTAIYSHGFVTVNGAKMSKSRGTFIKARTYLDHLSPEYLRYYFAAKLSSR 371 Query: 337 KDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 D F + + +RVN+DL + N+ SR+ + + K + G + T+ D +L Sbjct: 372 VDDFDLNLEDFAQRVNSDLVGKLVNIASRTGNFV-KKFGGTLS-----TDLDNMML---V 422 Query: 396 RVLQE----IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLY 449 R +QE I + + + +A+ ++++L + Y + PW L K + Sbjct: 423 REVQEAGPRIADFYEKREFGKAMREIMALADHANGYIADKAPWSLAKEEGKEQEVLAICS 482 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 + V R L I L+ +P LA + Sbjct: 483 TAINVFRLLVIYLKPVLPALAER 505 >gi|222825097|dbj|BAH22254.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Cadra cautella] Length = 143 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 74/141 (52%), Positives = 99/141 (70%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M++ E YI+T I Y N +PHIGHAY +I DV ARF +L G +V FTTGTDEHGQKI K Sbjct: 1 MEQFESFYITTPIYYVNDKPHIGHAYTSLICDVTARFVKLAGKNVKFTTGTDEHGQKIEK 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ G+ K F D+ S FR +A++++ + DDFIRTTE+RH LW ++ ++G IY Sbjct: 61 AAKTKGIEPKEFTDEISVTFRKLAELMNFNSDDFIRTTEERHEQAVIALWNRLEERGQIY 120 Query: 121 KGCYSGWYSLRDEAYYNDDEV 141 YSGWYS+RDEA+Y + E+ Sbjct: 121 LDSYSGWYSVRDEAFYQESEL 141 >gi|222478882|ref|YP_002565119.1| methionyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239] gi|222451784|gb|ACM56049.1| methionyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239] Length = 714 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 126/515 (24%), Positives = 230/515 (44%), Gaps = 57/515 (11%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N HIGH + DV R G + F +G+D HG +A A+ GV+ Sbjct: 14 VTCGLPYANGDLHIGHLRTYVGGDVYRRALERLGQETAFVSGSDMHGTPVAVNAEQEGVS 73 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + F + ++ +D++ T ++ + + L + + + G +Y+ Y Sbjct: 74 PEQFALDWHEQYAATFPKFNVEFDNYGHTHDETNTAVTQQLVRDLDEGGHLYEKEIMVAY 133 Query: 129 SLRDEAYYND----------------DEVYKGAD-----GQYYNAQH----NPVQWMEEE 163 D+ + D DE +G G+ + + NP ++ E Sbjct: 134 DPVDDQFLPDRYVEGTCPYCGAHARGDECDEGCQRHLEPGEVEDPESTITGNPAEYRERT 193 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-D 222 FF +SA+ + L + + RN+ +++ GL+D ++R DWGI P + Sbjct: 194 HQFFEVSAFSEYLSGFLDR---LEGTSNARNQPREWIEQGLQDWCITRD-MDWGIDYPGE 249 Query: 223 DPQ-YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---------------LHVIGKD 266 +PQ ++YVW+DA Y+++T G+ A W A +HVIG+D Sbjct: 250 NPQDLVLYVWVDAPIEYISSTKQYTERVGADAFDWEAAWKEGASDAHPEGGEIVHVIGRD 309 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325 I++ H I+WPA L + + P+ V + GF+ G+ S S + E ++E D L Sbjct: 310 IIQHHTIFWPAMLEATDHTEPRAVMASGFVTLGGKGFSTSRDRAVWADEYLDEGFHPDPL 369 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 RY+L +D + + + RVN +L +GN + RS+ ++YD P A Sbjct: 370 RYYLATNGGFQQDVDFSWEKFRDRVNTELVGTVGNFLYRSLLFAHRNYDD---APIADAT 426 Query: 386 SDESILSVCSRVLQEIR--ENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPD 442 SDE V R+ + I E N RA+ ++ ++ + Y +PW+L +P+ Sbjct: 427 SDE----VAERIEEAIADFEAAVNDYSVRAVGDAVTDLARFGNEYIQRSEPWKLVDDDPE 482 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A+ V++ V + + +A+L + P+ +++D L Sbjct: 483 EAAQVIHDCVAIAKAIAVLFEPIAPEKTERLWDQL 517 >gi|186476942|ref|YP_001858412.1| methionyl-tRNA synthetase [Burkholderia phymatum STM815] gi|184193401|gb|ACC71366.1| methionyl-tRNA synthetase [Burkholderia phymatum STM815] Length = 726 Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 132/508 (25%), Positives = 218/508 (42%), Gaps = 45/508 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG I Sbjct: 21 KARRQILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYVGADDTHGTPIMLK 80 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G+T K +D+ + + D IS+D++ T + + ++ + G I Sbjct: 81 AEQEGITPKQLIDRVWQEHKRDFDNFGISFDNYYSTDSEENRVLSESIYTALQAAGLIEA 140 Query: 122 GCYSGWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME--------- 161 Y E + D E K G + + + + P + + Sbjct: 141 RDIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYQPTELINPYSVVSGAT 200 Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRK 212 YFFRLS + ++ + E N++ ++ ++ L D +SR Sbjct: 201 PVKKTSTHYFFRLS--DPRCENFLRGWVGGLAQQEATNKMREWLGDAGEAKLADWDISRD 258 Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIGKD 266 +G +IP P YVW+DA Y + L G W H IGKD Sbjct: 259 APYFGFEIPGAPGKYFYVWLDAPVGYYASLRNLAEKRGLDFDAWTKKGATTEQYHFIGKD 318 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325 IL FH ++WPA L + P VF+HGF+ G K+SKS G I VIE + + L Sbjct: 319 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITANSVIETGMNPEWL 378 Query: 326 RYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 RY+ ++ + +D + + + RVN+DL N+ SR+ +LK +DG + + Sbjct: 379 RYYFAAKLNSTMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQD----S 434 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPD 442 +L+ + +I + + + RAL + L V+ Y D KPW+ K N Sbjct: 435 AMQHPLLASLRGAIAQIAAHYEARDYGRALRLTMELADSVNAYVDTAKPWDQAKDPANAV 494 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLA 470 V++E R L++ L+ +PK+A Sbjct: 495 ALHETCSVSLEAFRLLSLALKPVLPKVA 522 >gi|312795361|ref|YP_004028283.1| methionyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454] gi|312167136|emb|CBW74139.1| Methionyl-tRNA synthetase (EC 6.1.1.10) [Burkholderia rhizoxinica HKI 454] Length = 728 Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 137/516 (26%), Positives = 225/516 (43%), Gaps = 51/516 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N HIGH E I D+ R R+ G +V + D HG I AQ+ Sbjct: 36 RMLVTSALPYANGPIHIGHLVEYIQTDIWVRAMRMHGHEVYYVGADDTHGTPIMLRAQSE 95 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + +++ + + D IS+D++ T + ++ + D G I Sbjct: 96 GITPRQLIERVWQEHKRDFDHFGISFDNYYSTDSDENRVLSETIFTALHDAGLIAARDIE 155 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------------ 161 Y E + D KG A QY + + P + ++ Sbjct: 156 QAYDPVKEMFL-PDRFIKGECPKCSAKDQYGDSCEVCGSTYQPTELVKPYSVLSGATPVK 214 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK----SGLKDLSLSRKTFD 215 YFF+LS + ++ + E N++ ++ + L D +SR Sbjct: 215 KTSTHYFFKLS--DPRCETFLRGWVSQLAQQEATNKLREWLGEDGDATLADWDISRDAPY 272 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADL----HVIGKDILR 269 +G +IP P YVW+DA Y + L G + W P H IGKDIL Sbjct: 273 FGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLNFEEWVRPGSTTEQYHFIGKDILY 332 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LRY 327 FH ++WPA L + P VF+HGF+ G K+SKS G I+ I G+D LRY Sbjct: 333 FHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGTKMSKSRGTFINANSYI-TTGLDPQWLRY 391 Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 +L ++ + +D + D + RVN+DL N+ SR+ ++K +D + + Sbjct: 392 YLAAKLNSTMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLVKRFDARVQD----SAM 447 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 + +L + I + +++ RAL Q + L V+ Y DA KPWE K +P A Sbjct: 448 NHPLLVRLRDAIPTIAAHYESREYSRALRQTMELADAVNAYVDAAKPWEQAK-DPANAVA 506 Query: 447 V---LYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + V++E R L + L+ +PKLA + L + Sbjct: 507 LHETCSVSLEAFRLLTLALKPVLPKLAESVETFLSI 542 >gi|307128536|ref|YP_003880566.1| methionyl-tRNA synthetase [Candidatus Sulcia muelleri CARI] gi|306482998|gb|ADM89868.1| methionyl-tRNA synthetase [Candidatus Sulcia muelleri CARI] Length = 549 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 132/506 (26%), Positives = 239/506 (47%), Gaps = 45/506 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 MK +++ ++ A+ Y N HIGH + + AD+ R+ + +G V+F +GTDEHG I Sbjct: 1 MKNKKRYTVTAALPYANGPIHIGHLSGVYLPADIFVRYLKYNGKKVIFISGTDEHGVPIT 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G+TTK VD+ + + I +D+F RTT K H+ T +KK+ K Sbjct: 61 IKAKEEGLTTKKIVDKYHILIKKSLKKIGILFDNFSRTTSKIHYKTSISFFKKLYKKKKF 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----------NPVQWMEEEGYF-- 166 + +Y + + D + YN + +P + ++ YF Sbjct: 121 IERETEQYYDNKVNQFLPDRYILGICPKCNYNIAYGDQCEKCGFSISPEELIKPYSYFTG 180 Query: 167 ------------FRLSAYQDKLLSYYESHPEFILPIERRN---EVISFVKSGLKDLSLSR 211 L+ YQ+ L ++ F ++N ++ S++ GLK +++R Sbjct: 181 VKPILKKTKHWYLPLNKYQNFLEKCIKNKKHF-----KKNVYGQIKSWLNEGLKPRAITR 235 Query: 212 KTFDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW----PADLHVIG 264 +WG I IP++ ++YVW +A Y+++T G K+W A ++ IG Sbjct: 236 -DLNWGIPIPIPNNLGKVLYVWFEAPIGYISSTIEWSFKKGKNWEKYWKYPNTAIINFIG 294 Query: 265 KDILRFHAIYWPAFL-LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG-- 321 KD + FH I +P L + N LP V ++ F+ + +KIS S + E +E+ Sbjct: 295 KDNIIFHCIIFPIMLKIHGNYILPDNVPANEFLNIENKKISTSKKWAVWLHEYLEDFTNK 354 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D LRY L+ + KD + K++ N++L + +GN V+R V + + ++G +P P Sbjct: 355 EDVLRYVLISNMPETKDTNFSWKDFKQKNNSELVSILGNFVNRVVVLTKRYFNGKVPYPD 414 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 ++ D SIL + +I ++ AL + ++L ++Y ++PW+ + N Sbjct: 415 KLSKKDLSILDNIKKSPLKIGFFIEKYNFKYALLKFMNLARLGNKYLTLEEPWKKFQLNK 474 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVP 467 R T++Y++ ++I L L F+P Sbjct: 475 KRVKTIIYISFQIIGALGYLSNPFLP 500 >gi|73540380|ref|YP_294900.1| methionyl-tRNA synthetase [Ralstonia eutropha JMP134] gi|123760249|sp|Q474X7|SYM_RALEJ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|72117793|gb|AAZ60056.1| methionyl-tRNA synthetase [Ralstonia eutropha JMP134] Length = 688 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 139/535 (25%), Positives = 235/535 (43%), Gaps = 62/535 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N Q HIGH E I D+ RF R+ G +V + D HG + A+ Sbjct: 5 RILVTSALPYANGQIHIGHLVEYIQTDIWVRFQRMMGNEVYYVGADDTHGTPVMLRAEKE 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T K +D+ + D +S+D++ T + + + C ++ + I + Sbjct: 65 GITPKQLIDRVWTEHKRDFDSFLVSFDNYYSTDAEENRELCEKIYLALKADDLIAEREVE 124 Query: 126 GWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME------- 161 +Y + D E K GA QY ++ NP + Sbjct: 125 QFYDPVKNMFLPDRFIKGECPKCGAKDQYGDSCEVCGTTYVPTDLKNPYSVVSGATPVRK 184 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-----KSGLKDLSLSRKTFD 215 +FF+LS + ++ + E N++ ++ S L D +SR Sbjct: 185 SSTHFFFKLS--DPRCETFLREWVADLAQPEAANKMQEWLGSEGEASTLSDWDISRDAPY 242 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILR 269 +G +IP P YVW+DA Y + L G W H IGKDIL Sbjct: 243 FGFEIPGAPGKYFYVWLDAPIGYYASFKNLAEKKGIDFDAWVGPHSTAEQYHFIGKDILY 302 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328 FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LRY+ Sbjct: 303 FHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGMNPEWLRYY 362 Query: 329 LVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 ++ A +D + D RVN+DL N+ SR+ ++K ++G + D Sbjct: 363 FAAKLNASMEDLDLNLDDFIARVNSDLIGKYVNIASRAAGFLVKRFEGKV---------D 413 Query: 388 ESILSVCSRVLQEIRENM-------QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 E+ L+ +L+++RE + + +AL V+ L V+ + D +KPWEL K Sbjct: 414 EAALA--HPLLKQLREAAPQVAQLYEAREYSKALRLVMELTDTVNAFVDTEKPWELAKDE 471 Query: 441 PDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493 R++ V++E R L + L+ VP +A + L V E ++++D++L Sbjct: 472 AKRSALHAACSVSLEAFRLLTVYLKPVVPTVAAGVERFLNV--EPLDWRAIDKQL 524 >gi|114570377|ref|YP_757057.1| methionyl-tRNA synthetase [Maricaulis maris MCS10] gi|122315761|sp|Q0ANL8|SYM_MARMM RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|114340839|gb|ABI66119.1| methionyl-tRNA synthetase [Maricaulis maris MCS10] Length = 572 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 130/525 (24%), Positives = 241/525 (45%), Gaps = 44/525 (8%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++A+ Y N H+G+ A M+ ADV ARF RL G DVL+ TDEHG AA Sbjct: 3 RILITSALPYINGVKHLGNLAGSMLPADVYARFQRLRGHDVLYVCATDEHGTPAELAADA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG+ + + D+ + + +SYD F RT+ + + + + +KG I + Sbjct: 63 AGMDVRAYCDEQHDIQKRSGEGFSLSYDYFGRTSNAPNIRLTQHFAQVLEEKGLIAERVE 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD-- 174 +S+ D+ + D V ++ A G + ++ + + + ++S ++ Sbjct: 123 EQVFSIDDDRFLPDRYVEGTCPHCGFERARGDQCDNCGRLLEPTDLKEPYSKISGSKNLE 182 Query: 175 ----KLLSYYESHPEFILP--IERRNEVISFVKS--------GLKDLSLSRKTFDWGIKI 220 K L ++ E + ++ E S KS GL+D S++R WG+ + Sbjct: 183 VRETKHLHLVQTQMETKIRDWVDASTEWPSLAKSIAYKWLDEGLRDRSITRD-LKWGVPV 241 Query: 221 PDD--PQ-----YIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD--------LHVIG 264 D P+ + YVW DA Y+ T + + G +W D + +G Sbjct: 242 AQDGTPREGFEGKVFYVWFDAPIGYIGATVEWAEAGGGDWESWWRTDKGADDVTYVQFMG 301 Query: 265 KDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 KD + FH + +PA +L + P K+ + ++ G K S S + + ++ + Sbjct: 302 KDNVAFHTVSFPATILGSEEPWKTVDKLKAFNWLTWYGGKFSTSEKRGVFMDQALDILPG 361 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R++L G D + + + +N+DLAN +GN V+R + +DG +P+ G Sbjct: 362 DYWRWYLTANAPEGSDAAFTWEHFQGLINSDLANVLGNFVNRITKYTVSKFDGTLPSAGT 421 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 E++ + + + L + NM+ +A A+V ++ + + Y +PW K++ D Sbjct: 422 PGENEAWMAAELDQRLPALVANMEAMEFRKAAAEVRAIWAAGNEYLTKAEPWVKYKSDVD 481 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487 A+ + + ++ IL Q F+P+ A+KI D L V D+ R ++ Sbjct: 482 AAAVGVRTGLNLVALFGILAQPFIPEAASKILDALGVPDDRRSWE 526 >gi|162456166|ref|YP_001618533.1| methionyl-tRNA synthetase [Sorangium cellulosum 'So ce 56'] gi|187645700|sp|A9FBU8|SYM1_SORC5 RecName: Full=Methionyl-tRNA synthetase 1; AltName: Full=Methionine--tRNA ligase 1; Short=MetRS 1 gi|161166748|emb|CAN98053.1| metG2 [Sorangium cellulosum 'So ce 56'] Length = 690 Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 136/539 (25%), Positives = 229/539 (42%), Gaps = 55/539 (10%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQ 63 ++L +++A+ Y N HIGH E D+ AR+ R+ G + D HG I +A Q Sbjct: 2 KRLLLTSALPYANGHIHIGHLVEYTQTDIFARYWRMTGRRCISLCADDTHGTAIMIRARQ 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 V D ++ + RD A I +D + T + C +W + ++G + Sbjct: 62 EGRSEADVIADMSAAHQRDFA-AFQIRFDHYGSTNSPANRALCEEIWASLRERGMVTTKE 120 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEE----GYFF 167 + + + E + D KG A QY + + +E G Sbjct: 121 VTQLFDPQ-EGMFLADRFVKGTCPKCAAPDQYGDSCDRCGSTYAATDLVEPRSALTGARP 179 Query: 168 RLSAYQDKLLSYYESHP--------EFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGI 218 + + Q +++ P E +P E N + F+ L+D +SR +G Sbjct: 180 EVRSAQHLMVAIEPERPFLSTWTQGEGRMPKEIANYLAGHFLSEPLRDWDVSRPAPYFGF 239 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPAD----LHVIGKDILRFHAI 273 +IPD P YVW DA Y+ + + D + +W ++ +HVIGKDI+ FH + Sbjct: 240 EIPDAPGNYWYVWFDAPIGYMAASKEWCDREGEAFDDWWRSEETEIVHVIGKDIVYFHTL 299 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L SA LP +V HGF+ GEK+SKS G + ++ + LRY+ ++ Sbjct: 300 FWPAMLKSARFSLPSRVQVHGFLTVNGEKMSKSKGTFVLASTYLKHLDPAYLRYYYASKL 359 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 + D + + L +VNA+L N + NL SRS + + G+ A D + + Sbjct: 360 SSKVDDIDLNLEELVNKVNAELVNKVVNLASRSSRFVAQ--TGL----SAVYPEDGGLFA 413 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450 + I RA +++L + Y D +PW L K +A V V Sbjct: 414 SAAEEGDAIGAAYAAFDYARATRSIVALADRANEYVDRMQPWALAKQPEKKAELQAVCTV 473 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQRLKPG 496 + + RQ+ + L +PKLA+ + +L V ++ L +R++PG Sbjct: 474 ALNLFRQIVLYLAPVLPKLADDVARLLGCPMDRWALAKTPLVGTPVAAYEHLMKRVEPG 532 >gi|262341096|ref|YP_003283951.1| methionine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272433|gb|ACY40341.1| methionine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 561 Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 132/528 (25%), Positives = 241/528 (45%), Gaps = 68/528 (12%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 MK+ K ++ A+ Y N HIGH A ADV R+ R DV+F G+DEHG IA Sbjct: 1 MKKSNKYTVTAALPYANGPIHIGHLAGVYFPADVFVRYLRRKNKDVIFICGSDEHGVPIA 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ T + V++ +D I +D++ RT+ + H++ +KK+ +K I Sbjct: 61 MQAKREKKTPQEIVNKYHHMIQDCFTNFGIQFDNYSRTSTEIHYEISTSFFKKLHEKEKI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG--------------- 164 ++ ++ Y D+E + +Y + Q + E G Sbjct: 121 FE---------KESEQYYDEEAKQFLADRYISGQCPHCKKEEAYGDQCENCGSSLIPEDL 171 Query: 165 -------------------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK 205 ++F L+ YQ L + + + + + S++ GLK Sbjct: 172 IHPKSTISGSFPVFKKTKHWYFPLNEYQKFLEKWILINHQTDWKVNVYGQAKSWLDQGLK 231 Query: 206 DLSLSRKTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK------FWP 257 +++R +WG+ +P + ++YVW +A Y+++T + SK K +W Sbjct: 232 PRAITR-DLNWGVPVPILQEKGKVLYVWFEAPIGYISST-----IEWSKRKKIDWKPYWK 285 Query: 258 AD----LHVIGKDILRFHAIYWPAFLLS--ANLPLPKKVFSHGFILHKGEKISKSLGNVI 311 + IGKD + FH I +P L + LP K+ ++ F+ + +KIS S + Sbjct: 286 DKKTKLIQFIGKDNIVFHCIIFPVILKAYDGGYILPDKILANEFLHLENKKISTSKNWAV 345 Query: 312 DPIEVIEEV--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 E +E+ D LRY L+ + KD ++ +++ N +L +GN V+RS++++ Sbjct: 346 WGHEYLEDFPNQQDTLRYILIANMPEKKDNNFNWKDFQRKNNTELVAILGNFVNRSLTLV 405 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 K +G++P PG + D+ IL + I + +++ ALA ++L ++Y Sbjct: 406 KKYNNGIVPNPGILSIEDKKILKKIKNYPESIGDFIESYKFREALACFMNLAKLGNKYLT 465 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++ KK R T+LYV+++++ LA L + F+P A K+ D+L Sbjct: 466 EEE--PWKKEEKKRVETILYVSLQIVGMLAQLAEPFLPHTAKKLLDML 511 >gi|331006642|ref|ZP_08329926.1| Methionyl-tRNA synthetase [gamma proteobacterium IMCC1989] gi|330419557|gb|EGG93939.1| Methionyl-tRNA synthetase [gamma proteobacterium IMCC1989] Length = 705 Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 129/519 (24%), Positives = 223/519 (42%), Gaps = 69/519 (13%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQN 64 K+ +++A+ Y N H+GH E I D+ RF ++ G + D HG I KA QN Sbjct: 9 KILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMRGHKCTYVCADDAHGTAIMLKAEQN 68 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + + + + +D AD + +D+F T + + ++++++ G I Sbjct: 69 GISPEEQIANIKAEHEKDFADFF-VEFDNFHSTHSEENKALSELIYERLLANGHIASRNI 127 Query: 125 SGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM------------- 160 + Y E + D E G + + A ++P + Sbjct: 128 TQAYDPEKELFLADRYIKGTCPKCKTEDQYGDNCEACGATYSPTDLLNPKSAISGATPIE 187 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E E +FF+L + + L ++ + L E N++ ++ SGL++ +SR +G + Sbjct: 188 KESEHFFFKLPEFTEFLKNWTRAGH---LQTEMANKLAEWLDSGLQEWDISRDAPYFGFE 244 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL------------------ 260 IP+ P YVW+DA Y+ + L G + +W D Sbjct: 245 IPNQPGKYFYVWLDAPIGYIASFKNLCERTGENWEDYWIDDESDDVSSDNGRLNNGTELY 304 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 H IGKDI+ FHA++WPA L SA P V HGF+ G+K+SKS G I+ +E + Sbjct: 305 HFIGKDIVNFHALFWPAMLHSAKFRTPTAVNVHGFLTVNGQKMSKSRGTFINARSYLEHL 364 Query: 321 GVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGM 376 + LRY+ ++ G D + + RVN+DL + N+ SR+ I K Sbjct: 365 KPEYLRYYFAAKLTSGVDDLDLNLEDFLVRVNSDLVGKVVNIASRTAKFIQKSGGILSDT 424 Query: 377 IPTP---GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 I P F +++E+I L E RE +A+ ++++L + Y A+ P Sbjct: 425 IEDPELWQTFVDANETIAK-----LYEARE------FAKAMREIMNLADAANEYIAAKAP 473 Query: 434 WELKKTNPDRASTVLYVT--VEVIRQLAILLQAFVPKLA 470 W L K + T + + R + L+ +P+L+ Sbjct: 474 WALAKQEGQEQQVIDVCTLGINMFRVITTYLKPVLPELS 512 >gi|291614999|ref|YP_003525156.1| methionyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] gi|291585111|gb|ADE12769.1| methionyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] Length = 743 Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 138/530 (26%), Positives = 227/530 (42%), Gaps = 55/530 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ RF ++ G + D HG I A+ Sbjct: 4 KILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGNTCHYVCADDTHGTPIMLRAEKE 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + + D + +D++ T + +++ + I Sbjct: 64 GITPEQLIARVWLEHYDDFRAFHVEFDNYGSTNSAETKEFAEGIYRTLKGGNLIETRSIE 123 Query: 126 GWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQW--------------M 160 +Y + + D E K GA QY A + P + Sbjct: 124 QYYDPLKQMFLPDRFIKGECPKCGAKDQYGDNCEVCGAAYAPTELKNPYSAVSGTKPELR 183 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLSRKTFDW 216 + YFF+LSA+ + + + + P E N++ ++ + L D +SR + Sbjct: 184 NSDHYFFKLSAHSCQQFLRHWTRSGTLQP-EASNKMQEWLGAEGDNKLTDWDISRDAPYF 242 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG-SKAKFW----PADL-HVIGKDILRF 270 G +IPD P YVW+DA Y+ + L G S +W A+L H IGKDIL F Sbjct: 243 GFQIPDAPGKYFYVWLDAPVGYMGSFKQLCKAKGLSFDDYWRKGSNAELYHFIGKDILYF 302 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-GVDALRYFL 329 HA++WPA L A P ++F+HGF+ GEK+SKS G I ++ V + LRY+ Sbjct: 303 HALFWPAMLQHAGFRTPTRLFAHGFLTVNGEKMSKSRGTFITARSYVDHVKNTEYLRYYY 362 Query: 330 VREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---------- 378 ++ +D D RVN+DL N+ SRS I K + G + Sbjct: 363 AAKLNGTMEDIDLSLDDFVARVNSDLIGKYINIASRSAGFISKRFGGKLADHVLLAKCAD 422 Query: 379 ---TPGAFTE--SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 G E +++L + +I E + + +A V +L+ ++ Y DA KP Sbjct: 423 TSGLAGKLVEDHPKQNLLQILQDASAQIAELYEARDYSKATRTVGTLLDLINAYIDATKP 482 Query: 434 WELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 WEL K +N + V V ++ R + I L+ +P+LA + L V + Sbjct: 483 WELAKDPSNVEWLQGVCSVALQAFRIITIYLKPVLPQLARDVESFLNVGE 532 >gi|291456978|ref|ZP_06596368.1| methionine--tRNA ligase [Bifidobacterium breve DSM 20213] gi|291381389|gb|EFE88907.1| methionine--tRNA ligase [Bifidobacterium breve DSM 20213] Length = 584 Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 144/520 (27%), Positives = 238/520 (45%), Gaps = 74/520 (14%) Query: 40 LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTT 98 + G DVL +GTDEHG I A+ G+T + ++ +R +D+ D L +SYD F RTT Sbjct: 1 MKGNDVLMVSGTDEHGTPILVEAEKEGLTAQELANRYNRVIAKDLCD-LGLSYDLFTRTT 59 Query: 99 EKRHHDTCRILWKKISDKGDIYKGCY------SGWYSLRDEAYYNDDEVY--KGADGQYY 150 H + ++K+ + G IYKG S +L D + + +GA G Sbjct: 60 TGNHEHVVQEMFKQCLENGYIYKGTQQVAISPSTGRTLPDRYIEGECPICHAEGARGDQC 119 Query: 151 NAQHN---------PV--------QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193 +A N PV ++ + E YF L A + ++ E+ + R Sbjct: 120 DACGNELDPDELINPVSKINGETPRFEQTEHYFLDLPALAEANKAWLETRKGW------R 173 Query: 194 NEVISFVKSGLKDLSLSRKT--FDWGIKIP-----DDPQYIMYVWIDALTNYLTTTGYLD 246 VI+F K++ T DWGI +P D+P +YVW DA+ YL+ + Sbjct: 174 TNVINFSLGLFKEVKPRAITRDIDWGIPVPVKGWIDNPNKKLYVWFDAVIGYLSASIEWA 233 Query: 247 NPDGSKAKF--WPAD-----LHVIGKDILRFHAIYWPAFLLSAN--------------LP 285 G K+ W D + +GKD + FH+ WP+ +L+ N L Sbjct: 234 RRQGDPEKWREWWNDPKCPAYYFMGKDNITFHSQIWPSEMLAYNGKGSKGGETGPMGPLN 293 Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345 LP++V + F+ +G+K S S G VI +++ VDA+RY++ D + Sbjct: 294 LPEQVVASEFMTMEGKKFSSSRGIVIYVKDILARYPVDAVRYYISVAGPESSDSDFTWAE 353 Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403 + N +LA+ GNLV+R ++I K++ G IP + T D +L S + Sbjct: 354 FVRHNNEELASSWGNLVNRVANLINKNF-GEIPPLDEDSMTNEDRGLLEETSAAFDVVGS 412 Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463 +++ AL++ + +V ++++Y A +PW++K + R TVL+V + + LL Sbjct: 413 SIETHHQKHALSEAMRVVGDINKYISATEPWKIKD-DQARLGTVLHVAAQAVADANHLLA 471 Query: 464 AFVPKLANKIFDILFVAD------ENRCFQSLDQRLKPGF 497 F+P A K+++ L A E + + LD KPGF Sbjct: 472 PFLPHSAQKVWEALGGAGTFSPLPELKEVEDLD---KPGF 508 >gi|316974847|gb|EFV58317.1| methionyl-tRNA synthetase, cytoplasmic [Trichinella spiralis] Length = 975 Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 143/539 (26%), Positives = 241/539 (44%), Gaps = 60/539 (11%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G ++ ADV +R+ RL G + L+ GTDE+G A Sbjct: 17 ILITSALPYVNNYPHLGTIIGCVLSADVFSRYCRLRGYNTLYICGTDEYGTATETKAIEE 76 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT D+ RD+ + +I +D F RTT K+ + + ++KKI D G Sbjct: 77 GVTPIQLCDKYYELHRDVYEWFNIKFDYFGRTTTKQQTEIAQHIFKKIYDAGFTTTKNVD 136 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYN------------------AQHNPVQW 159 Y + E + D V Y+ A G + H P+ Sbjct: 137 QLYCEKCERFLADRFVEGECPFCGYEEARGDQCDKCGHLINAPELKLPKCKLCSHPPIIR 196 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDW 216 E F L Q L Y E N + ++K GLK+ ++R W Sbjct: 197 TSEH-LFLDLPKLQLNLEKYLEEQWASSDCCWSHNAIAITKKWLKEGLKERCITRD-LKW 254 Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILR 269 G +P + + YVW DA YL+ T P+ K K+W D HV +GKD + Sbjct: 255 GTPVPLENFSNKVFYVWFDAPIGYLSITANY-TPEHWK-KWWMDDKHVELYHFVGKDNVP 312 Query: 270 FHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 FH+I +PA L++ N K + + ++ ++ K SKS G + E + D R Sbjct: 313 FHSIIFPATLIATNEQYCKVKNISATEYLNYESSKFSKSRGVGVFGNNARETGIPADVWR 372 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 ++L+ +D ++ D +VN++L + +GN V+R++S + + + G+IP E Sbjct: 373 FYLLYTRPESQDAAFNWDDFALKVNSELLSNLGNFVNRALSFVERRFHGVIP------EV 426 Query: 387 DESILSV--CSRVLQEIRENMQNQL-------IHRALAQVISLVSEVDRYFDAQKPWELK 437 DES+L + + E + N + + ++ ++++ ++Y +++PWEL Sbjct: 427 DESLLDEDRLQAFIHNVNETLNNYIDCFDNLKLRDSVKCILNISRLGNQYMQSERPWELI 486 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496 K N +A +VL + V+ LA L+ +P+++ KI L + C S LKPG Sbjct: 487 KQNERQAGSVLAIVANVVAILAALVHPIMPEISTKICKQLQLEKLVFC-SSFQFLLKPG 544 >gi|87306777|ref|ZP_01088924.1| methionyl-tRNA synthetase [Blastopirellula marina DSM 3645] gi|87290956|gb|EAQ82843.1| methionyl-tRNA synthetase [Blastopirellula marina DSM 3645] Length = 673 Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 128/515 (24%), Positives = 209/515 (40%), Gaps = 44/515 (8%) Query: 13 IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72 + Y N HIGH E I D+ RF RL G D + D HG I +A+ V+ + F Sbjct: 1 MPYANGPIHIGHLVEYIQTDIWVRFQRLRGADCRYFCADDTHGTAITISAKRNEVSEEEF 60 Query: 73 VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD 132 + + S + I +D++ T + + + C WK + D + + Y Sbjct: 61 IAKMSAEHQTDFAGFAIEFDNYGSTNSEENRELCAQFWKSLRDADLVIEKEIEQLYDPEA 120 Query: 133 EAYYND----------DEVYKGADGQYYNAQHNPVQWMEE----EGYFFRLSAYQDKLLS 178 + + D + D + P ++ G L ++ Sbjct: 121 QQFLADRFVRGTCPKCGRTNQPGDNCECGHTYTPADLIDPVSVLSGATPELRKATHLFVA 180 Query: 179 YYESHPEFILPIERRNEVIS----------FVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228 + HP F+ + E + F+ L+D +SR +G +IPD P Sbjct: 181 LEKLHP-FLEKWSQSGEHLQTEVANYLKGHFLHEELRDWDISRPGPYFGFEIPDSPGNYW 239 Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-----HVIGKDILRFHAIYWPAFLLSAN 283 YVW DA Y+ +T +G W D H IGKDI FH ++WP L +A Sbjct: 240 YVWFDAPIGYIASTWEWCKRNGESLDKWWKDPETEVHHFIGKDITYFHTLFWPGMLQTAG 299 Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YD 342 LP KV HGF+ GEK+SKS G + + +E + LRY+ ++ D + Sbjct: 300 FTLPTKVHIHGFLTVGGEKMSKSKGTFVKAAKYLEHLDPAYLRYYYATKLGPRLDDLDLN 359 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402 +++++DL + N+ SR + G+ A D+ ++ +EI Sbjct: 360 VAEFAEKIDSDLVGKVVNIASRCAKFV--QTTGL----SAAYPDDDGRFEYAAQAGEEIA 413 Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAI 460 + +RA+ ++ L + + +A KPWEL+K N V V + + RQ+ I Sbjct: 414 AAYEACDYNRAMRLILELADRANPFIEANKPWELRKDPANAQALQDVCTVGINLFRQIII 473 Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495 L +PKLA ++ +L N S DQ P Sbjct: 474 YLSPVLPKLATEVGALL-----NDPITSWDQSQTP 503 >gi|82523741|emb|CAI78741.1| EMAP domain protein [uncultured gamma proteobacterium] Length = 646 Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 119/477 (24%), Positives = 220/477 (46%), Gaps = 45/477 (9%) Query: 32 DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ-NSRNFRDMADVLDIS 90 D+ RF R G L+ D HG I A+ G+T + +D + +D A L I Sbjct: 4 DIWVRFQRSRGHHCLYVCADDAHGTAIMLTAEKLGITPEQQIDTIRQEHMQDSAGFL-IG 62 Query: 91 YDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG------ 144 +D+F T + + C +++ + D G I + + + + D KG Sbjct: 63 FDNFHTTHSEENRFWCETVYQCLRDNGHIASRAITQAFDPEKQLFLAD-RFIKGTCPRCK 121 Query: 145 ----------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSYYESHP 184 A G Y+ NPV + E +FF+L ++D L ++ +S+ Sbjct: 122 TPDQYGDNCEACGATYSPTDLINPVSAISGATPVEKESTHFFFKLPEFEDMLRNWLDSN- 180 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TG 243 + + N++ ++++GL++ +SR +G +IP +P YVW+DA Y+ + Sbjct: 181 --TMQDQVANKLREWLEAGLQEWDISRDAPYFGFEIPGEPGKYFYVWLDAPIGYIASFQN 238 Query: 244 YLDNPDGSKAKFW--PADL---HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298 Y D + +W +D H IGKDI+ FH ++WPA L S+ L P +++HGF+ Sbjct: 239 YCDRTGHNFDDYWRLGSDCELYHFIGKDIINFHGLFWPAMLHSSGLRAPTAIYAHGFLTV 298 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANG 357 G K+SKS G I ++ + + LRY+ ++ D + + +RVN+D+ Sbjct: 299 NGTKMSKSRGTFIKAGTYLKYLDAEYLRYYFAAKLNASVDDIDLNLEDFVQRVNSDVVGK 358 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 + N+ SR + K +D + + T +++++++ + I + + ++AL ++ Sbjct: 359 VVNIASRCAGFLHKSFDNRL----SGTCAEQALVTSFIAAGEAIAGLFEEREFNKALREI 414 Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 ++L ++Y D +KPW L K + V V V + R L L+ +P +A K Sbjct: 415 MALADRANQYIDEKKPWILAKQENSEQEVHDVCSVGVNLFRVLMTYLKPVLPAMAEK 471 >gi|33519922|ref|NP_878754.1| methionyl-tRNA synthetase [Candidatus Blochmannia floridanus] gi|68565996|sp|Q7VRX4|SYM_BLOFL RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|33504268|emb|CAD83160.1| methionyl-tRNA synthetase [Candidatus Blochmannia floridanus] Length = 545 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 126/505 (24%), Positives = 225/505 (44%), Gaps = 46/505 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +K+ ++ A+ Y N HIGH E I AD+ R+ R+ +V F D HG I ++ Sbjct: 3 NKKILVTCALPYANGPLHIGHMLEHIQADIWVRYQRMKNNEVYFICADDAHGTAIMLKSK 62 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + ++ + + +++D D +ISY+++ T + +++ ++ K+ G I Sbjct: 63 QLNINPEIMIAKIQQEHYQDCCD-FNISYNNYHSTHSEENYELLNSIYTKLKKSGFIKSR 121 Query: 123 CYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM----------- 160 S Y ++ + D + G + A + P+ + Sbjct: 122 FISQLYDAQNNIFLPDRFIIGTCPKCRAHNQNGDNCDQCGAIYTPLDLINPKSAISGKSP 181 Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + + FF L + L ++ S +L E ++V + K GLK+ +SR +G Sbjct: 182 IIKKSKHLFFDLPQFTKSLYTWIHSG---VLQEETLHKVKEWFKLGLKEWDISRNEPYFG 238 Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILRF 270 KIP+ YVW+DA Y+ T L N + FW + H IGKDI F Sbjct: 239 FKIPNTSSKYFYVWMDAPIGYMGTFKNLCKKNKNILFEDFWSINSKVELYHFIGKDITYF 298 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H+++WPA L S P +F HG + G KISKS N I+ + + D LRY+ Sbjct: 299 HSLFWPAILESCQYRKPTGIFVHGHVTLNGSKISKSKNNFINVRTYLSHLNSDYLRYYYA 358 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +VNAD+ N I NL SR+ + I + G + + S+ Sbjct: 359 TKLSSKINDIDLNFNDFMLKVNADIINKILNLASRNSNFITQYNYGYL--SNSLENSNLY 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT----NPDRAS 445 + ++ L I + Q + A+ +++ L + ++Y D Q PW + K N + A Sbjct: 417 DFFIDAQYL--IGKLFQQREFSEAMRKIMQLADKANQYIDKQAPWHIVKQHGIHNKNIAL 474 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLA 470 + + +++ R L I L+ +P L+ Sbjct: 475 CIFSMGIQLFRVLVIYLKPVLPILS 499 >gi|294494856|ref|YP_003541349.1| methionyl-tRNA synthetase [Methanohalophilus mahii DSM 5219] gi|292665855|gb|ADE35704.1| methionyl-tRNA synthetase [Methanohalophilus mahii DSM 5219] Length = 680 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 123/502 (24%), Positives = 215/502 (42%), Gaps = 40/502 (7%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ + Y N HIGH I AD+ R + G +V F G+D HG I A+ Sbjct: 10 ILVTCGLPYANGMAHIGHLRTYIPADIFVRSLKKMGHEVTFVCGSDTHGTPIVFNAEEQN 69 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 T + + + +F + + I +D F T + +H+ + ++ + +Y Sbjct: 70 TTPQALIKKYHSHFDETFKSMGIEFDAFGTTDDPTNHNRTHDIVNRLIENDYVYPKTIEI 129 Query: 127 WYSLRDEAYYND----------------DEVYKGADGQYYNAQ-HNPV--------QWME 161 Y + D DE +G + NPV ++ E Sbjct: 130 AYCAGCNRFLPDRYVEGECPHCAESARGDECDQGCGKHLEPGELKNPVCTICGGVAEYKE 189 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 +E +FF+LS + D LL Y + RN + +VK GL D ++R +WG+K P Sbjct: 190 QEHFFFKLSQFNDYLLEYLD---RLDGTSNARNYALGWVKQGLDDWCITR-NLEWGVKFP 245 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDG-SKAKFWPAD---LHVIGKDILRFHAIYWPA 277 ++YVW+DA Y+ T N G S K+W D +H IG DI+ H I+ PA Sbjct: 246 GRDDLVVYVWVDAPIGYIAFTEEWANATGDSWEKYWKDDGEIVHFIGGDIIYHHCIFLPA 305 Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIAC 335 L A V + G + + + SKS G V+ + + G D LRY+L + Sbjct: 306 MLKGAGYSPASSVVASGMVKIENKTFSKSRGYVVWVGDDYMQQGFHQDLLRYYLASYTSH 365 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 K+ + +++ N +L GN + R++ K++ IP + D+ ++ Sbjct: 366 TKELNFSWKVFQEKTNTELVGVFGNFLYRTLLFAYKNFKA-IPE----GKLDDEVMETIQ 420 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 + E E M+ + V++L S + YF +++PW L K + + VL +++ Sbjct: 421 NTIDEASEAMEKYEFKKYADSVMTLASYGNIYFQSREPWNLIKEDKEECGRVLKNCMQIG 480 Query: 456 RQLAILLQAFVPKLANKIFDIL 477 + L +L + +P+ A + L Sbjct: 481 KALTLLYEPLIPEKAGNAWKQL 502 >gi|147918827|ref|YP_687447.1| methionyl-tRNA synthetase [uncultured methanogenic archaeon RC-I] gi|121690214|sp|Q0W0H2|SYM_UNCMA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|110622843|emb|CAJ38121.1| methionyl-tRNA synthetase [uncultured methanogenic archaeon RC-I] Length = 683 Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 130/523 (24%), Positives = 222/523 (42%), Gaps = 48/523 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ + Y N HIGH I AD+ R R+ G + +F G+D HG I A+ Sbjct: 16 VLVTCGLPYANGSAHIGHLRTYIPADMFVRTLRMMGQETVFVCGSDAHGTPIIVNAEEQK 75 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG---- 122 ++ + VD+ F + + +D + T + +H + + ++ G +Y Sbjct: 76 ISPRQLVDKYHVQFDSIFKKCGVIFDRYGNTDDPTNHARTKSIVSELQKNGYVYPKEIKV 135 Query: 123 --CYSGWYSLRD----------EAYYNDDEVYKGAD-----GQYYNAQ----HNPVQWME 161 C L D + DE G G+ + + + + Sbjct: 136 AYCPQCQRGLPDRYVEGVCPYCSSIARGDECDIGCQRHLEPGEILDPKCKVCGSKAEVRT 195 Query: 162 EEGYFFRLSAYQDKLLSYYES---HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 +E +FF+LS + D L Y + P + N + + K LKD ++R +WG+ Sbjct: 196 QEHFFFKLSEFGDFLQEYLNTLHATPNAV------NYAMEWAKE-LKDWCITR-NLEWGV 247 Query: 219 KIPDDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIY 274 K P ++YVW+DA Y+ T Y + W D +H IG DI+ H I+ Sbjct: 248 KYPGHEDLVVYVWVDAPIGYIAFTEEYAKAAGKNWEDLWKGDSRIIHFIGGDIIYHHCIF 307 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI--DPIEVIEEVGVDALRYFLVRE 332 WPA L A LP V + G I +K SKS G ++ + + D LRY+++ Sbjct: 308 WPAMLKGAGYTLPWGVVASGMIKVNDKKFSKSRGYIVWVEDDYLAHGFHPDLLRYYILSY 367 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 + KD + + ++N +L GN V+R ++ I D G I G D I S Sbjct: 368 TSHTKDINFSWTEFQTKINKELVGSYGNFVNRVLTFI--DSKG-IDVKGTI---DPKISS 421 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + ++ + N + +I+L + YF + +PW+L K NP VL+ + Sbjct: 422 AIKTAIDMVKTEIGNYEFKKICDSIITLSDVGNTYFQSHEPWKLIKENPAACENVLFNCI 481 Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495 ++++ LAIL + VP+ A +I+ +L +D L P Sbjct: 482 QIVKALAILSEPTVPEKAKEIWGMLGYDPATLASARIDDALVP 524 >gi|299142102|ref|ZP_07035236.1| methionine--tRNA ligase [Prevotella oris C735] gi|298576564|gb|EFI48436.1| methionine--tRNA ligase [Prevotella oris C735] Length = 687 Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 132/516 (25%), Positives = 240/516 (46%), Gaps = 51/516 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ ++ A+ Y N HIGH A + AD+ R+ RL +V+F G+DEHG I Sbjct: 4 KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQEVVFIGGSDEHGVPITL 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + D+ + + IS+D + RTT K H +KK+ D+G + Sbjct: 64 RAKKEGITPQDVCDRYHTLIKKSFEDFGISFDVYSRTTSKTHSKLASDFFKKLYDEGKLI 123 Query: 121 KGCYSGWYS-----------LRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------- 160 + +Y + E + ++ G + + +P++ + Sbjct: 124 EKESEQYYDEEAHQFLADRYIMGECPHCHNQNAYGDQCEKCGSDLSPMELINPHSTISGS 183 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213 + + ++ L+ YQ L + + H E+ R V KS L D+ L + Sbjct: 184 KPVIRKTKNWYLPLNDYQGWLKKWILDEHKEW------RPNVYGQCKSWL-DMDLQPRAM 236 Query: 214 ---FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYL--DNPD--GSKAKFWPAD----L 260 DWGI +P + ++YVW DA Y++ T L + P+ GS K+W + Sbjct: 237 TRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDNEPEKFGSWEKWWKDPDTRLV 296 Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 H IGKD + FH I +P L + + LP V ++ F+ + +KIS S + E ++E Sbjct: 297 HFIGKDNIVFHCIIFPTMLKAHGDYILPDNVPANEFLNLEDDKISTSRNWAVWLHEYLQE 356 Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 + D LRY L KD + ++R N++L GN V+R++ + K + G++ Sbjct: 357 LPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYWAGVV 416 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G + D + L+ V +++ + A + ++L ++Y +PW++ Sbjct: 417 PACGELQDVDRAALNEFKDVKEKVEAYLDVFKFREAQKEAMNLARIGNKYITECEPWKVW 476 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 KT+P R T+LY++++++ LAI + F+P + K+ Sbjct: 477 KTDPKRVETILYISLQLVANLAIAFEPFLPFSSEKL 512 >gi|319409554|emb|CBY89844.1| methionyl-tRNA synthetase [Neisseria meningitidis WUE 2594] Length = 717 Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 129/511 (25%), Positives = 219/511 (42%), Gaps = 52/511 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 36 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECYYCCADDTHGTPVMLAAQKQ 95 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ + + + +I YD++ T + + +++ + G I Sbjct: 96 GIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVIE 155 Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM-------------- 160 + + + D V G + + ++P + + Sbjct: 156 QLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPELR 215 Query: 161 EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSLS 210 E E +FF+L D L ++ ++ P L E N++ ++ G L D +S Sbjct: 216 ESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWDIS 273 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIG 264 R +G +IPD P YVW+DA Y+ + L + G KA H IG Sbjct: 274 RDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHFIG 333 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 KDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + + Sbjct: 334 KDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPE 393 Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 394 WMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGKLKDV-- 451 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440 SD ++L+ + + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 452 ---SDSALLAKLTAQSEAIAECYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQ 508 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 +R V + L L +P+ A Sbjct: 509 DERLHEVCSELINAFTMLTAYLAPVLPQTAT 539 >gi|163753508|ref|ZP_02160632.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Kordia algicida OT-1] gi|161327240|gb|EDP98565.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Kordia algicida OT-1] Length = 739 Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 136/511 (26%), Positives = 238/511 (46%), Gaps = 45/511 (8%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ I+ A+ Y N HIGH A + AD+ AR+ RL G DV F G+DEHG I A+ Sbjct: 63 QRYTITAALPYTNGPIHIGHLAGVYVPADIYARYLRLIGKDVAFMCGSDEHGVAIPMRAK 122 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV+ + +D+ + + IS+D++ RT+ + HH T +KK+ + G+ + Sbjct: 123 KEGVSPQDIIDKYHGIIKQSFEDFGISFDNYSRTSAEIHHKTASDFFKKLYEDGEFIEEV 182 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWM------ 160 Y + + D V Y+ A G Q N NP + Sbjct: 183 TEQLYDAEADQFLADRFVVGTCPKCNYEEAYGDQCENCGSSLSGTELINPKSAITGNVPT 242 Query: 161 --EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + + +F L Y D L + E H + P +V S+V GL+ +++R DWG Sbjct: 243 LKQTKHWFLPLDKYSDFLNEWIVEGHKKDWKP-NVYGQVKSWVDDGLRPRAVTRD-LDWG 300 Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270 I +P + ++YVW DA Y++ T +G + + D +H IGKD + F Sbjct: 301 IPVPVEGAEGKVLYVWFDAPIGYISATKEWAEREGKDWEPYWKDSTTKLVHFIGKDNIVF 360 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327 H I +P+ L + + LP V ++ F+ +G K+S S + E +E+ D LRY Sbjct: 361 HCIIFPSMLKAHGDYILPDNVPANEFLNLEGRKLSTSKNWAVWLHEYLEDFPGKEDVLRY 420 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTES 386 L KD + + R N++L +GN ++R + + K YDG++P G + E Sbjct: 421 ALTANAPETKDNDFTWKDFQTRNNSELVAILGNFINRVIVLTHKYYDGIVPEYTGEYEE- 479 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 L+ I +++ A ++++L +++ A +PW+ K +P+ Sbjct: 480 ----LTQIQHFPNVIASSIERYRFREASQELMNLARLGNQFLQANEPWKKIKEDPETVKG 535 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++YV +++ +A+L + F+P A K+ ++L Sbjct: 536 IMYVALQIAAAIAVLSEPFLPFTAKKLKNML 566 >gi|325203164|gb|ADY98617.1| methionyl-tRNA synthetase [Neisseria meningitidis M01-240355] Length = 685 Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 130/517 (25%), Positives = 222/517 (42%), Gaps = 52/517 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ + + + I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVREEHLADFTGFGIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVIE 123 Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM-------------- 160 + + + D V G + + ++P + + Sbjct: 124 QLFDPEKQMFLPDRFVKGECPKCHTRDQYGDNCEVCGTTYSPTELINPYSAVSGAKPELR 183 Query: 161 EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSLS 210 E E +FF+L D L ++ ++ P L E N++ ++ G L D +S Sbjct: 184 ESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWDIS 241 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIG 264 R +G +IPD P YVW+DA Y+ + L + G +++ AD H IG Sbjct: 242 RDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFIG 301 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 KDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + + Sbjct: 302 KDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPE 361 Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 362 WMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV-- 419 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440 +D ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 420 ---ADSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEGQ 476 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +R V + L L +PK+A L Sbjct: 477 DERLHEVCSELINAFTMLTAYLAPVLPKVAENAAKFL 513 >gi|171186224|ref|YP_001795143.1| methionyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta] gi|229558527|sp|B1YAZ7|SYM_THENV RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|170935436|gb|ACB40697.1| methionyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta] Length = 565 Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 134/510 (26%), Positives = 229/510 (44%), Gaps = 42/510 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K I +A Y PH+G+ ++ ADV AR+ RL G DV+F +G+D HG I A Sbjct: 3 KYVIGSAWPYVQTVPHLGNLIGSVLSADVYARYLRLRGHDVVFVSGSDMHGTPIEVEAIQ 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV + + ++ DIS+D + T H + + KI + G I+ Sbjct: 63 LGVDPADYAAKMHNIVAELFKRWDISFDLYTHTHSDVHIKFVQDFFLKIYNNGYIFTREE 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQ--------------W 159 Y RD Y D + Y+ A G Q N +P Q W Sbjct: 123 EVPYCPRDRIYLPDRFIIGRCPYCGYERARGDQCENCGRLLDPKQLVEPRCAICGSKPEW 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 ++ L +D++ Y E +P LP + + +K GLK +++R WGI Sbjct: 183 RLTRHWYLDLRRLEDRIRRYVEENPH--LPPNAKEMSLGMLKEGLKPRAITRDN-RWGIP 239 Query: 220 --IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAI 273 P +YVW +A+ Y++ L +G + ++W + + +GKD + FH I Sbjct: 240 APFPGAEGKTIYVWFEAVLGYISAVAELKGEEGLR-RYWKSPDTKIVFFVGKDNIPFHVI 298 Query: 274 YWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDALRYFL 329 PA LL+ LP S ++L++G+K SKS G ID E ++ + D R+ L Sbjct: 299 ILPALLLANGDGYALPTTTASTEYLLYEGDKFSKSRRWGIWID--EALQLMPPDYWRFVL 356 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 V +D + + +N L + +GN V+R +++I G +P PG + DE Sbjct: 357 VYMRPENRDTNFTWQAALEVINKVLNDDVGNYVNRVLTLIKNRMGGAVPPPGTPAKEDED 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 ++ + + ++ + + AL V+ + E +RY +A+ PW+L + + + A+ V+Y Sbjct: 417 FVAKATDLFKKAERHYDAIELKDALHAVVEIAREGNRYLNARAPWDLLRRDRESANAVMY 476 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFV 479 ++ LA L P+ A +++ +L V Sbjct: 477 RAYWSLKMLAAGLTPVTPRSAEELWRMLGV 506 >gi|257092590|ref|YP_003166231.1| methionyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045114|gb|ACV34302.1| methionyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 701 Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 139/520 (26%), Positives = 233/520 (44%), Gaps = 55/520 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I D+ RF ++ G + + D HG I A+ Sbjct: 4 KILVTSALPYANGAIHLGHLVEYIQTDIWVRFQKMRGHECWYVCADDTHGTPIMLRAEAE 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + +++ + RD + I +D++ T ++ ++ G I Sbjct: 64 GITPETLIERVQGEHARDFSG-FHIGFDNYYTTHSDETRRCANEIYARLQAAGLIETRVI 122 Query: 125 SGWYSLRDEAYYND----DEVYK-GADGQY----------YNAQ--HNPV--------QW 159 +Y + + D E K GA QY Y A NP + Sbjct: 123 EQYYDPLKQMFLPDRFIKGECPKCGAHDQYGDNCESCGAAYTANDLKNPYSAVSGARPEL 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTFD 215 + E YFF+LS + + + E L E N++ ++ ++ L D +SR Sbjct: 183 RQSEHYFFKLSDPRCQTFLRRWTQAEGRLQSEAANKLQEWLGAEGENHLTDWDISRDAPY 242 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW-PADL----HVIGKDILR 269 +G +IP P YVW+DA Y+ L + G ++W P H IGKDIL Sbjct: 243 FGFEIPGAPGKYFYVWLDAPIGYMGAFRNLCDRQGLDFDEYWRPGSATELYHFIGKDILY 302 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LRY 327 FHA++WPA L A P KVF+HGF+ G K+SKS G I + + G+D LRY Sbjct: 303 FHALFWPAELEHAGYRTPSKVFAHGFLTVDGAKMSKSRGTFITAESYLAQ-GLDPEWLRY 361 Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + +++ +D + D RVN+D+ N+ SRS ++K + G + T Sbjct: 362 YYAAKLSSSMEDIDLNLDDFIARVNSDMVGKFVNIASRSAGFVVKHFAGQLCT------C 415 Query: 387 DESILSVCS----RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440 DES+ ++ + R L I ++ + + +A+ ++++L ++Y D+ KPWEL + Sbjct: 416 DESLPAIQAIRDRRAL--IADHYEARDFGKAIREIMALTDLANQYVDSVKPWELARQAGR 473 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 + + R AILL+ +P L+ + L VA Sbjct: 474 ESELQAACSNALNLFRLFAILLKPVLPALSARAEAFLNVA 513 >gi|149912132|ref|ZP_01900718.1| methionyl-tRNA synthetase [Moritella sp. PE36] gi|149804780|gb|EDM64822.1| methionyl-tRNA synthetase [Moritella sp. PE36] Length = 458 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 116/461 (25%), Positives = 206/461 (44%), Gaps = 42/461 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M K+ +++A+ Y N H+GH E I D+ RF + G + D HG I Sbjct: 6 MTSERKILVTSALPYANGPIHLGHMLEYIQTDIWVRFQKQRGNTCTYVCADDAHGTPIML 65 Query: 61 AAQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AQ G+T + + Q + D AD ++ +D++ T + + +++ ++ D G I Sbjct: 66 KAQERGITPEAMIAQTKIEHMADFAD-FNVDFDNYHSTHSDENRELATMIYTRLRDNGHI 124 Query: 120 YKGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM-------- 160 S + E + D E G + A ++P + Sbjct: 125 KTRVISQLFDPEKEMFLPDRFVKGICPECKSEDQNGDNCDACGATYSPTDLISPRSVVSG 184 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + E YFF L A+ D L ++ S L E N++ + ++GLK +SR Sbjct: 185 AEPVLKDSEHYFFDLPAFSDMLQTWTRSGA---LQDEIANKLAEWFETGLKQWDISRDAP 241 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDI 267 +G +IPD P YVW+DA Y+ + L + D +++ D H IGKDI Sbjct: 242 YFGFEIPDAPGKFFYVWLDAPIGYMGSFKNLCDRRDDLDFDEYFKKDSTTELYHFIGKDI 301 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FH+++WPA L P VF+HGF+ G+K+SKS G I ++ + + LRY Sbjct: 302 VNFHSLFWPAMLEGTGFRKPTGVFAHGFVTVNGKKMSKSRGTFIMARTYLDNLNPEYLRY 361 Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + +++ D + + +RVN+D+ + NL SR+ I K +D + A S Sbjct: 362 YYAAKLSSKIVDLDLNLEDFAQRVNSDVVGKVVNLASRTAGFIYKRFDAKL----ASEIS 417 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 + ++L+ I + + + +A+ ++++L + + Y Sbjct: 418 EPALLAEFVAAGDTIAQYYETREFSKAIKEIMALADKANAY 458 >gi|281424592|ref|ZP_06255505.1| methionine--tRNA ligase [Prevotella oris F0302] gi|281401263|gb|EFB32094.1| methionine--tRNA ligase [Prevotella oris F0302] Length = 687 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 132/516 (25%), Positives = 241/516 (46%), Gaps = 51/516 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ ++ A+ Y N HIGH A + AD+ R+ RL +V+F G+DEHG I Sbjct: 4 KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQEVVFIGGSDEHGVPITL 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + D+ + + IS+D + RTT K H +KK+ D+G + Sbjct: 64 RAKKEGITPQDVCDRYHTLIKKSFEDFGISFDVYSRTTSKIHSKLASDFFKKLYDEGKLI 123 Query: 121 KGCYSGWYS-----------LRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------- 160 + +Y + E + ++ G + + +P++ + Sbjct: 124 EKESEQYYDEEAHQFLADRYIMGECPHCHNQNAYGDQCEKCGSDLSPMELINPHSTISGS 183 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213 + + ++ L+ YQ L + + H E+ R V KS L D+ L + Sbjct: 184 KPVVRKTKNWYLPLNDYQGWLKKWILDEHKEW------RPNVYGQCKSWL-DMDLQPRAM 236 Query: 214 ---FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYL--DNPD--GSKAKFWPAD----L 260 DWGI +P + ++YVW DA Y++ T L + P+ GS K+W + Sbjct: 237 TRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDNEPEKFGSWEKWWKDPDTRLV 296 Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 H IGKD + FH I +P L + ++ LP V ++ F+ + +KIS S + E ++E Sbjct: 297 HFIGKDNIVFHCIIFPTMLKAHSDYILPDNVPANEFLNLEDDKISTSRNWAVWLHEYLQE 356 Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 + D LRY L KD + ++R N++L GN V+R++ + K + G++ Sbjct: 357 LPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYWAGVV 416 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G + D + L+ V +++ + A + ++L ++Y +PW++ Sbjct: 417 PACGELQDVDRAALNEFKDVKEKVEAYLDVFKFREAQKEAMNLARIGNKYITECEPWKVW 476 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 KT+P R T+LY++++++ LAI + F+P + K+ Sbjct: 477 KTDPKRVETILYISLQLVANLAIAFEPFLPFSSEKL 512 >gi|167626594|ref|YP_001677094.1| methionyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596595|gb|ABZ86593.1| Methionine--tRNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 673 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 122/501 (24%), Positives = 224/501 (44%), Gaps = 44/501 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I +D+ RF +L G + +F G+D HG I A++ Sbjct: 3 KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNECIFVCGSDTHGTPIMLKAKSL 62 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ + V++ S N + +I +D++ T + + ++ K++ + I K + Sbjct: 63 GIAPEELVEKYSNNHQKDFLSFEIEFDNYHSTHSLINKEIVEDIYGKLNAQKLISKKEIA 122 Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------------ 161 Y + + D V KG A+ QY A ++P + + Sbjct: 123 QAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPKSVVSGKAPIQ 181 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E +FF L + + + + ES+ +L E N++ + + GL+ +SR +G Sbjct: 182 KNSEHFFFDLPSLEKNIKDWIESNK--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGFA 239 Query: 220 IP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD------LHVIGKDILRFH 271 IP D Q YVW+DA Y+ + Y D + +FW + H IGKDI+ FH Sbjct: 240 IPGTDEQKFFYVWLDAPMGYIASFRDYCDKNNVDFNEFWGDNSCESELYHFIGKDIIYFH 299 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 A++WPA L S P VF++GF+ G+K++KS G I ++ + LRY+ Sbjct: 300 ALFWPAILSSTGYKTPTSVFANGFLTVNGKKMAKSRGTFIQARTYLDNLEPSYLRYYFAS 359 Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 + D + + + N+D+ + N+ SR I K +D + A D+ + Sbjct: 360 RLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL----ANEVLDKEL 415 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVL 448 ++ + I E + + A+ +++L + +++ D KPW+L K + V Sbjct: 416 EKEFAKSHRAITEAFEKREFAHAVRLIMTLADKANQFIDHHKPWQLAKEEGQEQKVHQVC 475 Query: 449 YVTVEVIRQLAILLQAFVPKL 469 + + + L L+ VP + Sbjct: 476 SQGINMFKVLVAYLKPIVPSI 496 >gi|289824250|ref|ZP_06543845.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 637 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 116/471 (24%), Positives = 213/471 (45%), Gaps = 45/471 (9%) Query: 40 LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99 + G +V F D HG I AQ G+T + + + S+ + +ISYD++ T Sbjct: 1 MRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHS 60 Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA------------DG 147 + + +++ ++ + G I S Y ++ + D KG + Sbjct: 61 DENRELSELIYTRLKENGFIKNRTISQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNC 119 Query: 148 QYYNAQHNPVQWME--------------EEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193 + A ++P + +E E +FF L ++ + L ++ S L + Sbjct: 120 EVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVA 176 Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253 N++ + +SGL+ +SR +G +IP+ P YVW+DA Y+ + L + G Sbjct: 177 NKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTT 236 Query: 254 KF---WPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 F W D H IGKDI+ FH+++WPA L ++ P +F HG++ G K+SK Sbjct: 237 SFDEYWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSK 296 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSR 364 S G I ++ D+LRY+ +++ D + + +RVNAD+ N + NL SR Sbjct: 297 SRGTFIKASTWLKHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASR 356 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + I K +DG++ A +D + + I E +++ +A+ ++++L Sbjct: 357 NAGFINKRFDGVL----AAELADPQLYKTFTDAAAVIGEAWESREFGKAIREIMALADVA 412 Query: 425 DRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473 +RY D Q PW + K A + + + + R L L+ +P L+ ++ Sbjct: 413 NRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPTLSERV 463 >gi|256426015|ref|YP_003126668.1| methionyl-tRNA synthetase [Chitinophaga pinensis DSM 2588] gi|256040923|gb|ACU64467.1| methionyl-tRNA synthetase [Chitinophaga pinensis DSM 2588] Length = 693 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 139/529 (26%), Positives = 236/529 (44%), Gaps = 54/529 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M + + I+ A+ Y N HIGH A I AD+ R+ R DV F GTDEHG I Sbjct: 1 MAKFNRYLITAALPYANGPVHIGHLAGCYIPADIYVRYLRAKKADVKFIGGTDEHGVPIT 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A VT + VD+ + D + IS+D F RTT++ HH+T +K + DKG Sbjct: 61 IKAMKENVTPQDIVDKYHKIIYDSFTDMGISFDIFSRTTKQVHHETAADFFKTMYDKGLF 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEVY----KGADGQYYNAQH-------NPVQWMEEEGYFFR 168 + ++ + D + K + Y Q +P + +E Sbjct: 121 EEKESEQFFDETANVFLADRYIVGTCPKCGNPNAYGDQCERCGTSLSPDELIEPRSTLSN 180 Query: 169 LSAYQDKLLSYY---------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + K +Y E H E+ + + S++ GL+ +++R + Sbjct: 181 AVPVKKKTKHWYMPLQNYEPFLKEWLLEGHKEWKNNV--YGQCKSWIDGGLQSRAMTRDS 238 Query: 214 FDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDI 267 WGI++P D ++YVW DA Y++ T L + A +W D +H IGKD Sbjct: 239 -SWGIQVPLPDAEGKVLYVWFDAPIGYISATKELT---ANWADYWCKDDTKLVHFIGKDN 294 Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324 + FH + +PA L LP+ V ++ F+ + EK+S S + + +++ D Sbjct: 295 IVFHCVIFPAMLKGHGGYVLPENVPANEFLNIESEKVSTSRNWAVWVHDYVKDFPDQQDV 354 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-- 382 LRY L KD + ++R N++L + N V R++ ++ K +G +P A Sbjct: 355 LRYVLTSIAPETKDSDFTWKDFQQRNNSELTDIFSNFVHRTMVLMHKLCNGKVPAFHADL 414 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---- 438 E D+++ + + Q I ++++N ALA+VI + ++Y ++PW+L Sbjct: 415 KDEKDDALFAALTASKQRIEDSLENFRFREALAEVIDISRSGNKYLQEREPWKLASAMAK 474 Query: 439 ------TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 N + L++ +++ LAIL+ F+P A KI +L V D Sbjct: 475 DPSLAAANQKQIDNCLHLCLQLTANLAILVNPFLPFTAKKICHMLKVVD 523 >gi|261391580|emb|CAX49018.1| methionyl-tRNA synthetase (methionine--tRNA ligase; MetRS) [Neisseria meningitidis 8013] gi|325131203|gb|EGC53918.1| methionyl-tRNA synthetase [Neisseria meningitidis OX99.30304] gi|325135409|gb|EGC58030.1| methionyl-tRNA synthetase [Neisseria meningitidis M0579] gi|325201222|gb|ADY96676.1| methionyl-tRNA synthetase [Neisseria meningitidis M01-240149] gi|325207084|gb|ADZ02536.1| methionyl-tRNA synthetase [Neisseria meningitidis NZ-05/33] Length = 685 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 129/511 (25%), Positives = 219/511 (42%), Gaps = 52/511 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECYYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ + + + +I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVIE 123 Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM-------------- 160 + + + D V G + + ++P + + Sbjct: 124 QLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPELR 183 Query: 161 EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSLS 210 E E +FF+L D L ++ ++ P L E N++ ++ G L D +S Sbjct: 184 ESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWDIS 241 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIG 264 R +G +IPD P YVW+DA Y+ + L + G KA H IG Sbjct: 242 RDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHFIG 301 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 KDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + + Sbjct: 302 KDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPE 361 Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 362 WMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGKLKDV-- 419 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440 SD ++L+ + + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 420 ---SDSALLAKLTAQSEAIAECYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQ 476 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 +R V + L L +P+ A Sbjct: 477 DERLHEVCSELINAFTMLTAYLAPVLPQTAT 507 >gi|308388254|gb|ADO30574.1| methionyl-tRNA synthetase [Neisseria meningitidis alpha710] Length = 685 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 128/510 (25%), Positives = 218/510 (42%), Gaps = 52/510 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ + + + +I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVIE 123 Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM-------------- 160 + + + D V G + + ++P + + Sbjct: 124 QLFDPEKQMFLPDRFVKGECPKCHAHDQYGDNCEVCGTTYSPTELINPYSAVSGAKPELR 183 Query: 161 EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSLS 210 E E +FF+L D L ++ ++ P L E N++ ++ G L D +S Sbjct: 184 ESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWDIS 241 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIG 264 R +G +IPD P YVW+DA Y+ + L + G KA H IG Sbjct: 242 RDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHFIG 301 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 KDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + + Sbjct: 302 KDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPE 361 Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 362 WMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV-- 419 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440 +D ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 420 ---ADSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEGQ 476 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 477 DERLHEVCSELINAFTMLTAYLAPVLPQTA 506 >gi|309379858|emb|CBX21634.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 684 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 131/509 (25%), Positives = 222/509 (43%), Gaps = 55/509 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKAGGKIESRV 121 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + + Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGVKPE 181 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWD 239 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL------DNPDGSKAKFWPADLHV 262 +SR +G +IPD P YVW+DA Y+ + L D + KA H Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCGRIGIDFDEYFKAGSQTEMYHF 299 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359 Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 360 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGKLKDV 419 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 SD ++L+ + + I E +N+ +AL +++L V+ Y DA KPWEL K Sbjct: 420 -----SDSALLAKLTAQSEAIAECYENREYAKALRDIMALADAVNEYVDANKPWELAKQE 474 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKL 469 + + V E+I IL P L Sbjct: 475 -GQDERLHEVCSELINAFTILTAYLAPVL 502 >gi|260769036|ref|ZP_05877970.1| methionyl-tRNA synthetase [Vibrio furnissii CIP 102972] gi|260617066|gb|EEX42251.1| methionyl-tRNA synthetase [Vibrio furnissii CIP 102972] Length = 658 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 132/484 (27%), Positives = 214/484 (44%), Gaps = 48/484 (9%) Query: 27 EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADV 86 E I AD+ R+ RL G V F D HG I AQ G+T + + S + Sbjct: 3 EHIQADIWVRYQRLRGNIVNFICADDAHGTPIMLKAQQMGMTPEEMIAAVSEEHQKDFAG 62 Query: 87 LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG-- 144 DIS+D++ T + + + ++ ++ G I S + E + D V KG Sbjct: 63 FDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQLFDPEKEMFLPDRFV-KGTC 121 Query: 145 --------------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSYY 180 A G+ Y+ NP + + E +FF L ++ L + Sbjct: 122 PKCKSENQYGDNCDACGETYSPTELINPKSAVSGATPIMKDSEHFFFDLPQFESMLKEWT 181 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 S L E N++ + +SGL+ +SR +G +IP + YVW+DA Y+ Sbjct: 182 RSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKNKFFYVWLDAPVGYMA 238 Query: 241 TTGYLDN-PDGSK-AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 + L N DG ++W D H IGKDI+ FH+++WPA L + P VF H Sbjct: 239 SFKNLCNKTDGLDFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSGFRKPNNVFVH 298 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNA 352 G++ G K+SKS G + + + + LRY+ ++ D + + +RVNA Sbjct: 299 GYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVNA 358 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV--LQEIRENMQNQLI 410 D+ N I NL SR+ I K +DG + A E ++ R+ L E RE Sbjct: 359 DVVNKIVNLASRNAGFITKRFDGKLSDSFAEPELYNEFVAAADRIAELYEARE------F 412 Query: 411 HRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVLYVTVEVIRQLAILLQAFVPK 468 RA+ ++ +L + ++Y D + PW + K+ D+A + V + + R L L+ +P Sbjct: 413 GRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGINLFRVLLTYLKPVMPG 472 Query: 469 LANK 472 LA + Sbjct: 473 LAAR 476 >gi|229525645|ref|ZP_04415050.1| methionyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426] gi|229339226|gb|EEO04243.1| methionyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426] Length = 658 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 132/483 (27%), Positives = 215/483 (44%), Gaps = 46/483 (9%) Query: 27 EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF-RDMAD 85 E I AD+ R+ RL G V F D HG I AQ G+T + ++ S RD A Sbjct: 3 EHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMGMTPEAMIEMVSEEHQRDFAG 62 Query: 86 VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG- 144 DIS+D++ T + + ++ ++ G I S + E + D V KG Sbjct: 63 -FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQLFDPEKEMFLPDRFV-KGT 120 Query: 145 ---------------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSY 179 A G+ Y+ NP + + E +FF L ++ L + Sbjct: 121 CPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEW 180 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 S L E N++ + + GL+ +SR +G +IP + YVW+DA Y+ Sbjct: 181 TRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYM 237 Query: 240 TTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 + L + G ++W D H IGKDI+ FH+++WPA L + P VF Sbjct: 238 GSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFHSLFWPAMLDGSGFRKPTNVFV 297 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVN 351 HG++ G K+SKS G + + + + LRY+ ++ D + + +RVN Sbjct: 298 HGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVN 357 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 ADL N I NL SR+ I K +DG + F E D + + + I E + + Sbjct: 358 ADLVNKIVNLASRNAGFITKRFDGKL--SAHFAEPD--LYAEFAGAADRIAELFEAREFG 413 Query: 412 RALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKL 469 RA+ ++ +L + ++Y D + PW + K+ D+A + V + + R L I L+ +P L Sbjct: 414 RAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGLNLFRVLMIYLKPVMPAL 473 Query: 470 ANK 472 A + Sbjct: 474 AER 476 >gi|317504517|ref|ZP_07962493.1| methionine--tRNA ligase [Prevotella salivae DSM 15606] gi|315664378|gb|EFV04069.1| methionine--tRNA ligase [Prevotella salivae DSM 15606] Length = 687 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 132/516 (25%), Positives = 234/516 (45%), Gaps = 51/516 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ ++ A+ Y N HIGH A + AD+ R+ RL +V+F G+DEHG I Sbjct: 4 KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQEVVFIGGSDEHGVPITL 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + D+ + ++ IS+D + RTT K H +KK+ D G + Sbjct: 64 RAKKEGITPQDVCDRYHKLIKESFKEFGISFDVYSRTTSKTHSLMASDFFKKLYDDGKLV 123 Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------- 160 + +Y + + D ++ G + + +P++ + Sbjct: 124 EKESEQYYDEEAKQFLADRYIMGECPHCHNQNAYGDQCEKCGSDLSPMELINPHSTISGS 183 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213 + + ++ L+ YQ L + + H E+ R V KS L D+ L + Sbjct: 184 KPVIRKTKNWYLPLNEYQTWLKKWILDEHKEW------RPNVYGQCKSWL-DMDLQPRAM 236 Query: 214 ---FDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPAD----L 260 DWGI +P ++YVW DA Y++ T L N GS K+W + Sbjct: 237 TRDLDWGIPVPVKGAEGKVLYVWFDAPIGYISNTKELCDKEPNKFGSWEKWWKEPDTRLV 296 Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 H IGKD + FH I +P L + LP V ++ F+ + +KIS S + E ++E Sbjct: 297 HFIGKDNIVFHCIIFPTMLKAHGGYILPDNVPANEFLNLEDDKISTSRNWAVWLHEYLKE 356 Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 + D LRY L KD + ++R N++L GN V+R++ + K + G++ Sbjct: 357 LPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYWAGVV 416 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G + D + L V ++ + A + ++L ++Y +PW++ Sbjct: 417 PACGELQDVDRATLEEFEGVKDKLEAYLDAFKFREAQKEAMNLARIGNKYITECEPWKVW 476 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 KT+P R T+LY++++++ LAI + F+P + K+ Sbjct: 477 KTDPKRVETILYISLQLVANLAIAFEPFLPFSSEKL 512 >gi|296121388|ref|YP_003629166.1| methionyl-tRNA synthetase [Planctomyces limnophilus DSM 3776] gi|296013728|gb|ADG66967.1| methionyl-tRNA synthetase [Planctomyces limnophilus DSM 3776] Length = 696 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 139/560 (24%), Positives = 233/560 (41%), Gaps = 99/560 (17%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQN 64 ++ +++A+ Y N HIGH E + D+ RF +L G ++ D HG I +A Q Sbjct: 4 QILVTSALPYANGHIHIGHLVEYLQTDIWVRFQKLVGNRCVYVCADDTHGTAIMIRARQE 63 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 +V + + +D I +D++ T + C +W+ + I + Sbjct: 64 GRSELEVIGEMRESHLKDFTG-FGIEFDNYGSTHSDENRALCAEIWQSLRQADLIVERNV 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQY----------YNAQH--NPV---------- 157 +Y +E + D + GA+ QY Y+A NP+ Sbjct: 123 ERFYDPVEETFLADRFIKGTCPKCGAEDQYGDNCDKCGSTYDATEVINPISTLSGATPVR 182 Query: 158 ------------------QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199 +W + G+ Q+++ +Y + H F Sbjct: 183 RESLQLFVELEKLHGWLNEWTQTGGHL------QEEIANYLQGH---------------F 221 Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPA 258 + L+D +SR +G +IPD P YVW DA Y+ +T +G K + +W + Sbjct: 222 LNDPLRDWDVSRPARYFGFEIPDSPGNYWYVWFDAPIGYIASTHQWCKANGEKLEDWWKS 281 Query: 259 DL----HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 D H IGKDI FH ++WPA L +A L LPKKV HGF+ GEK+SKS G + Sbjct: 282 DRTEIHHFIGKDITYFHTLFWPAMLKTAGLNLPKKVHIHGFLRVNGEKMSKSKGTFVMAS 341 Query: 315 EVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++ + LRY+ +++ +D + D R+N+DL + NL SR+ Sbjct: 342 TYLKHLDPAYLRYYYASKLSSRVEDLDLNLDEFVARINSDLVGKVVNLASRTARFAQ--- 398 Query: 374 DGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 PT A D + + + +I E + +A+ ++ L + ++Y + Sbjct: 399 ----PTGLSAQYPDDGGLFAEAAAEAGKIAELYEACEYAQAMRAIMVLAEKANKYVEDNA 454 Query: 433 PWELKKTNPDRAST---VLYVTVEVIRQLAILLQAFVPKLANKIFDIL------------ 477 PW LKK +P +A V V + + RQLA+ L +P+LA + +L Sbjct: 455 PWTLKK-DPAQAGKLQDVCTVALNLFRQLAVYLAPVLPQLAEQTGRLLNAPMKSWDEAQT 513 Query: 478 -FVADENRCFQSLDQRLKPG 496 VA F+ L +R+ P Sbjct: 514 PLVASPVNLFEHLMKRVDPA 533 >gi|86157740|ref|YP_464525.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] gi|85774251|gb|ABC81088.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] Length = 694 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 135/517 (26%), Positives = 222/517 (42%), Gaps = 61/517 (11%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++L +++A+ Y N H+GH E + DV RF R G DV + D HG I A Sbjct: 3 QRLLVTSALPYANGPIHLGHLVEYVQTDVYVRFRRACGDDVAYVCAADSHGTPIEVNAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T K FV++ + + + T + ++ + KG +YK Sbjct: 63 VGMTPKAFVEKYRAEQHADFRAFGVEFSTYYTTDSDENRRWAYRVYDALKAKGLVYKKSV 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 Y D + D V Q+ V E G + +D + S P Sbjct: 123 EQLYCETDRRFLPDRFVKGTCPKCGTPDQYGDV--CEHCGTTYDPRELKDPYCAICRSAP 180 Query: 185 ---------------------------EFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215 E L R +V ++ + L+D ++R F Sbjct: 181 VVRASDHAYVNLRKPDVNAVIHEWVNAEGHLEPAVREQVKGWL-ADLQDWCITRDAPYFG 239 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYL---DNPDGSK---AKF--------WPADL- 260 + + P+ P +YVW+DA YL++ + + P+G++ A+F PA L Sbjct: 240 FPVTDPEFPGKFLYVWVDAPIGYLSSAEHFFAAEAPEGARLAPAEFERRYLAVDSPARLE 299 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 H IGKDILRFHA++WPA L +A L P ++ HG + GEK+SKS G + ++ Sbjct: 300 HFIGKDILRFHAVFWPAMLWAAGLKRPDRMPVHGHLTVNGEKMSKSRGTFVTGRTYLDS- 358 Query: 321 GVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 G+D LRYF + G D D + R+NADLAN + NL SR +++ + Sbjct: 359 GLDPELLRYFYAANLGSGVSDLDLSLDEFRNRINADLANNVANLASRVAALLQR------ 412 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWEL 436 PG T + + ++ +R + L +R + +++S + V +R KPWE Sbjct: 413 -LPGGVTAALDPEIAAATREAVKGARGAYQALEYRDVVRLVSQAASVCNRRVQETKPWED 471 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +R +VLY T + + LA +L +P+ + ++ Sbjct: 472 PAGEAER--SVLYTTGKALLGLARVLAPILPQFSARL 506 >gi|254805891|ref|YP_003084112.1| Methionyl-tRNA synthetase [Neisseria meningitidis alpha14] gi|254669433|emb|CBA08678.1| Methionyl-tRNA synthetase [Neisseria meningitidis alpha14] Length = 717 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 129/511 (25%), Positives = 222/511 (43%), Gaps = 54/511 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 36 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAAQKQ 95 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + D I YD++ T + + +++ + G I Sbjct: 96 GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 154 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 + + + D V G + + ++P + + Sbjct: 155 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 214 Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209 E E +FF+L D L ++ ++ P L E N++ ++ G L D + Sbjct: 215 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 272 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263 SR +G +IPD P YVW+DA Y+ + L + G +++ AD H I Sbjct: 273 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFI 332 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 GKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 333 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 392 Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 393 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 451 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439 +D ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 452 ----ADSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEG 507 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 508 QDERLHEVCSELINAFTMLTAYLAPVLPQTA 538 >gi|254671245|emb|CBA08498.1| Methionyl-tRNA synthetase [Neisseria meningitidis alpha153] Length = 717 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 130/508 (25%), Positives = 222/508 (43%), Gaps = 53/508 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 36 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQKQ 95 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + D I YD++ T + + +++ + G I Sbjct: 96 GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 154 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 + + + D V G + + ++P + + Sbjct: 155 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 214 Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209 E E +FF+L D L ++ ++ P L E N++ ++ G L D + Sbjct: 215 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWDI 272 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263 SR +G +IPD P YVW+DA Y+ + L + G +++ AD H I Sbjct: 273 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFI 332 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 GKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 333 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 392 Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 393 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 451 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 +D ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 452 ----ADSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQE- 506 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKL 469 + + V E+I IL P L Sbjct: 507 GQDERLHEVCSELINAFTILTAYLAPVL 534 >gi|307595974|ref|YP_003902291.1| methionyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429] gi|307551175|gb|ADN51240.1| methionyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429] Length = 584 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 129/513 (25%), Positives = 238/513 (46%), Gaps = 47/513 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + I +A Y A PH+G+ ++ ADV R+ RL G DV+F +G+DEHG I A Sbjct: 14 RRRWVIGSAWPYIYAVPHLGNLIGSVLSADVFTRYLRLRGDDVVFVSGSDEHGTPIEVEA 73 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GV + D+ + + ++ +IS+D++ RT H + + + K+ G ++ Sbjct: 74 LQLGVKPRELTDRMHEIVKRLFELWEISFDNYTRTESPVHREFVKEFFLKLYRNGYVFTR 133 Query: 123 CYSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHN---------------------P 156 Y +D Y D + Y G D + N P Sbjct: 134 EDEVPYCPKDRIYLPDRFIIGTCPYCGYDKARGDQCENCGRLLEPRLLINPRCAICGSKP 193 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + W++ ++ L+ +D++ Y E + LP + + +K GL+ +++R W Sbjct: 194 I-WVKTRHWYLDLTKLEDRVRKYVEGNTA--LPENAKQMSLGMLKEGLRPRAITRDN-KW 249 Query: 217 GIK--IPDDPQYIMYVWIDALTNYLTTT-GYL---DNPDGSKAKFWPADLHVI---GKDI 267 GI+ P +YVW +A+ Y++ T Y N D K ++ + V+ GKD Sbjct: 250 GIEAPFPGADNKTIYVWFEAVLGYISATIEYFRGKGNEDEWKRYWFDPNTRVVFFVGKDN 309 Query: 268 LRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVD 323 + FH I PA L+++ P +P S ++L +G+K SKS +G ID E + + VD Sbjct: 310 IPFHVILLPAMLIASGDPYVMPYTTASTEYLLFEGKKFSKSQRIGIWID--EALALMPVD 367 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 R+ L+ + G+D + + +N+ L + IGN + R ++ I ++G +P+ G+ Sbjct: 368 YWRFVLIYQRPEGRDTSFAWHQALEVINSILNDVIGNFIHRVLTFISTRFNGEVPS-GSL 426 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 + D + E+ + + AL +V+ + +RY + ++PWEL K+N D Sbjct: 427 RDVDVKYRDEALSHFRSSEEHYEKIELKDALMEVVEIARVGNRYLNERQPWELIKSNRDE 486 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 A V+ + +++ L+I L +P+ ++ + Sbjct: 487 AGAVILNALHMVKALSIGLWPVMPRSMEDLWSM 519 >gi|189500062|ref|YP_001959532.1| methionyl-tRNA synthetase [Chlorobium phaeobacteroides BS1] gi|189495503|gb|ACE04051.1| methionyl-tRNA synthetase [Chlorobium phaeobacteroides BS1] Length = 703 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 137/543 (25%), Positives = 244/543 (44%), Gaps = 69/543 (12%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + ++TA+ Y N H+GH A + AD+ RF R+ G +++ G+DEHG I A Sbjct: 7 RTLVTTALPYANGPVHLGHLAGVYLPADIYVRFKRMQGENIIHIGGSDEHGVPITITADK 66 Query: 65 AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ + VD+ +SRN D + IS+D + RTT H T + + +I K K Sbjct: 67 EGISPQDVVDRYHSRNM-DAFERCGISFDHYGRTTSPVHFRTAQEFFSEIERKNIFVKKK 125 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG------------------- 164 +Y Y +D V G N + N Q E+ G Sbjct: 126 ERHFYDPEARRYLSDRYVV-GTCPVCNNPEANGDQ-CEQCGTHLSPRELSNPRSKLSDRT 183 Query: 165 --------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLSRK 212 ++F L +QD+L ++ +SH + + R V+++ ++ GLKD +++R Sbjct: 184 PELRETLHWYFPLGRFQDQLKNFVDSHDD-----DWRANVLNYTRTWLNQGLKDRAITRD 238 Query: 213 TFDWGIKIP---DDPQ-YIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD----LH 261 WGI +P D+ Q ++YVW DA+ Y++ T +G+ +W + ++ Sbjct: 239 -LHWGIPVPLDTDEAQGKVLYVWFDAVLGYISFTREWAEKEGNPELWRDYWQSSECRIIN 297 Query: 262 VIGKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 IGKD + FH + +PA L++ N L V + F+ +G K SKS + Sbjct: 298 FIGKDNVVFHTLMFPAILMAWNEDRVGGKYSLADNVPASEFMNFEGRKFSKSRNYAVYLG 357 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374 E ++ D LRY + KD + + R N +LA+ +GN + RS+ +D Sbjct: 358 EFLDRFPADTLRYSIAMNYPESKDSDFSWSDFQNRTNGELADTLGNFIKRSIDFTNSKFD 417 Query: 375 GMIPTPGAFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 G +P A T D L + + +++ + + A + + + +R+ +P Sbjct: 418 GELPY--ACTGEDWDALGIDWADSFEKLDQAYEQFHFREAASLTMQIARLANRFLTESEP 475 Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493 W++ KT+ + A + +++ + LA+ +P +N+I+ +L QSLD + Sbjct: 476 WKVMKTDREAAGKTMALSLNLCYTLALAWYPVIPHTSNRIYALLGFD------QSLDDAV 529 Query: 494 KPG 496 K G Sbjct: 530 KKG 532 >gi|326562649|gb|EGE12951.1| methionyl-tRNA synthetase [Moraxella catarrhalis 103P14B1] Length = 683 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 134/516 (25%), Positives = 225/516 (43%), Gaps = 47/516 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M K+ +++A+ Y N H+GH E I D+ R + +V + D HG I Sbjct: 1 MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMRHNVTYVCADDAHGTAIML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AQ+ G+T + + + + +D A L I +D++ T + + ++ + G I Sbjct: 61 KAQDNGITPEEQIATVKASHEKDFAGFL-IDFDNYHSTHSSENQYFSQKIYTTLKQNGYI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME 161 + + ++ + D KG A QY YNA NP + Sbjct: 120 FTKDVEQLFD-TEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLS 178 Query: 162 EEG--------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 YFF L + + L ++ +S I N++ + +GL +SR Sbjct: 179 NSSPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSI--YNKLSEWFDAGLAPWDISRDA 236 Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVI 263 +G KIPD +P YVW+DA Y+ + L D D +++ D H I Sbjct: 237 PYFGFKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFI 296 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323 GKDI+ FH+++WPA L A P V +HGF+ GEK+SKS G I + + + Sbjct: 297 GKDIVYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPE 356 Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ +++ +D D + ++VN+DL + N+ SRS I K++DG + Sbjct: 357 YLRYYFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKL--SDE 414 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP- 441 TE +C+ EI + + + +++ + + Y D QKPW L K Sbjct: 415 LTEPKLIDEIICAG--DEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKAGKF 472 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D V V++ + +L I L +PKL+ + + L Sbjct: 473 DEVQKVCTVSLNIFHKLIIYLTPILPKLSEQAREFL 508 >gi|194334175|ref|YP_002016035.1| methionyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] gi|194311993|gb|ACF46388.1| methionyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] Length = 704 Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 124/522 (23%), Positives = 237/522 (45%), Gaps = 57/522 (10%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ ++TA+ Y N H+GH A + AD+ R+ RL G D++ G+DEHG I A Sbjct: 6 KRTLVTTALPYANGPVHLGHLAGVYLPADIYVRYRRLCGDDIIHIGGSDEHGVPITITAD 65 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT + VD+ D IS+D + RT+ + HH T R +++I+ K K Sbjct: 66 REGVTPQDVVDRYHGMNLDAFTRCGISFDYYGRTSSRLHHATAREFFREINGKNIFVKKT 125 Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG-------- 164 ++ + +D V G + +P++ ++ + Sbjct: 126 EKQFFDPSAGRFLSDRYVTGTCPICSSPDANGDQCEQCGTHLSPMELIDPKSKLSNQVPE 185 Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRKTF 214 ++F L +Q++L Y SH + + R+ V+++ +K GL D +++R Sbjct: 186 LRETLHWYFPLGIFQEQLEGYVNSHQD-----DWRSNVLNYTRTWLKQGLTDRAITRD-L 239 Query: 215 DWGIKIP-DDPQY---IMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPADLHVI--- 263 WG+ +P D P+ ++YVW DA+ Y++ T NP+ + + D +I Sbjct: 240 SWGVPVPVDGPEALGKVLYVWFDAVLGYISFTRQWAEDRGNPEEWRRYWQDPDCRIINFI 299 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVF-------SHGFILHKGEKISKSLGNVIDPIEV 316 GKD + FH + +PA L++ N ++V+ + F+ +G K SKS + E Sbjct: 300 GKDNVVFHTLMFPALLMAWNQGRDEEVYNLADNVPASEFMNFEGRKFSKSRNYAVYLGEF 359 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 ++ D LRY + KD + + R N +LA+ +GN + RS+ ++G+ Sbjct: 360 LDSFPADTLRYCIAMNYPENKDSDFSWTDFQNRTNGELADTLGNFIKRSIDFSNVRFEGV 419 Query: 377 IPTPGAFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 +P + D L + + E +N A + + + +R+ +PW+ Sbjct: 420 VPCDCSM--DDWQGLGIDWQDSFACLDEAYRNFHFREAASLSMQIARRANRFLTESEPWK 477 Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + K +P++A+ + +++ + LA+ +P A++I+ +L Sbjct: 478 VIKQDPEKAAKTMALSLNLCYTLAVAFYPVIPSTASRIYAML 519 >gi|325143425|gb|EGC65754.1| methionyl-tRNA synthetase [Neisseria meningitidis 961-5945] gi|325197336|gb|ADY92792.1| methionyl-tRNA synthetase [Neisseria meningitidis G2136] Length = 684 Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 129/508 (25%), Positives = 224/508 (44%), Gaps = 53/508 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + D D I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVREEHLADFTD-FGIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 + + + D V G + + ++P + + Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182 Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209 E E +FF+L D L ++ ++ P L E N++ ++ G L D + Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263 SR +G +IPD P YVW+DA Y+ + L + G +++ AD H I Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFI 300 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 GKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360 Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 +D ++L+ + + I E +++ +AL +++L V+ Y DA KPWEL K Sbjct: 420 ----ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEG 475 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKL 469 A + V E+I +L P L Sbjct: 476 QDAR-LHEVCSELINAFTMLTAYLAPVL 502 >gi|161869048|ref|YP_001598214.1| methionyl-tRNA synthetase [Neisseria meningitidis 053442] gi|304388827|ref|ZP_07370882.1| methionine--tRNA ligase [Neisseria meningitidis ATCC 13091] gi|161594601|gb|ABX72261.1| methionyl-tRNA synthetase [Neisseria meningitidis 053442] gi|304337231|gb|EFM03410.1| methionine--tRNA ligase [Neisseria meningitidis ATCC 13091] Length = 720 Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 129/511 (25%), Positives = 219/511 (42%), Gaps = 54/511 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 39 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQKQ 98 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + D I YD++ T + + +++ + G I Sbjct: 99 GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 157 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 + + + D V G + + ++P + + Sbjct: 158 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 217 Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209 E E +FF+L D L ++ ++ P L E N++ ++ G L D + Sbjct: 218 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 275 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVI 263 SR +G +IPD P YVW+DA Y+ + L + G KA H I Sbjct: 276 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHFI 335 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 GKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 336 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 395 Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 396 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 454 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439 +D ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 455 ----ADSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEG 510 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 511 QDERLHEVCSELINAFTMLTAYLAPVLPQTA 541 >gi|187649784|sp|A9LZS9|SYM_NEIM0 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS Length = 685 Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 129/511 (25%), Positives = 219/511 (42%), Gaps = 54/511 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + D I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 + + + D V G + + ++P + + Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182 Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209 E E +FF+L D L ++ ++ P L E N++ ++ G L D + Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVI 263 SR +G +IPD P YVW+DA Y+ + L + G KA H I Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHFI 300 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 GKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360 Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439 +D ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 420 ----ADSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEG 475 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 476 QDERLHEVCSELINAFTMLTAYLAPVLPQTA 506 >gi|119871860|ref|YP_929867.1| methionyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184] gi|187647759|sp|A1RRE2|SYM_PYRIL RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|119673268|gb|ABL87524.1| methionyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184] Length = 567 Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 136/527 (25%), Positives = 238/527 (45%), Gaps = 47/527 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K I +A Y PH+G+ ++ ADV AR+ R G DV+F +G+D HG I A Sbjct: 3 KYVIGSAWPYVQTVPHLGNLIGSVLSADVYARYLRFRGHDVVFVSGSDMHGTPIEVEAIQ 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV + + + + ++ DIS+D + T H + + KI + G I+ Sbjct: 63 LGVDPEEYAKKMHQIVAELFKRWDISFDLYTHTHSDTHIKFVQNFFLKIYNNGYIFTKEE 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQ--------------W 159 Y RD+ Y D + Y+ A G Q N +P Q W Sbjct: 123 EVPYCPRDKIYLPDRFIIGKCPYCGYERARGDQCENCGRLLDPKQLIEPRCAICGSRPEW 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + ++ L +D++ Y E +P LP + + +K GLK +++R WGI Sbjct: 183 RITKHWYLDLRKLEDRIRKYVEENPH--LPPNAKEMSLGMLKEGLKPRAITRDN-KWGIP 239 Query: 220 --IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDILRFHA 272 P +YVW +A+ Y++ L D K ++W + +GKD + FH Sbjct: 240 APFPGAEGKTIYVWFEAVLGYISAVVELFREDAGKWERYWKDPETKIVFFVGKDNIPFHV 299 Query: 273 IYWPAFLLS--ANLPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDALRYF 328 I PA LL+ LP S ++L++G+K SKS G ID E ++ + D R+ Sbjct: 300 IILPALLLANGEGYTLPTTTASTEYLLYEGDKFSKSRRWGIWID--EALQLMPPDYWRFI 357 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L+ +D + + +N + + +GN ++R ++ I G++P PGA T DE Sbjct: 358 LIYIRPENRDTSFTWALALEIINKIMNDDVGNYINRVLTFIKNRMGGVVPPPGAPTREDE 417 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 ++ ++ ++ ++ + AL V+ + E +RY +A+ PWEL + + + A+ V+ Sbjct: 418 EFINRVIQLFKKAEKHYDAIELKDALHTVVEIAREGNRYLNARAPWELLRRDIEVANAVM 477 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495 Y ++ +A L P+ A +++ +L ++ S D+ KP Sbjct: 478 YRAYWSLKTIAAGLTPVTPRSAAELWKMLGISQ-----PSWDEAYKP 519 >gi|330817988|ref|YP_004361693.1| Methionyl-tRNA synthetase [Burkholderia gladioli BSR3] gi|327370381|gb|AEA61737.1| Methionyl-tRNA synthetase [Burkholderia gladioli BSR3] Length = 718 Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 133/517 (25%), Positives = 226/517 (43%), Gaps = 47/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG I A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYVGADDTHGTPIMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ K +++ + D IS+D+F T + + ++ + + G I + Sbjct: 77 QEGLSPKQLIERVWGEHKRDFDSFGISFDNFYTTDSEENRVLSENIYLALKEAGLIAERD 136 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME---------- 161 Y E + D KG A QY + + P + + Sbjct: 137 IEQAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYQPTELINPYSVVSGATP 195 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 +FF+LS + ++ + E N++ ++ ++ L D +SR Sbjct: 196 VRKTSTHHFFKLS--DPRCENFLRGWVGGLAQPEATNKMREWLGDAGEAKLADWDISRDA 253 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADL----HVIGKDI 267 +G +IP P YVW+DA Y + L + G + W P H IGKDI Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLADRLGLDFEAWTRPGSTAEQYHFIGKDI 313 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I+ VI+ + + LR Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGTKMSKSRGTFINAKSVIDTGMNPEWLR 373 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + RVN+DL N+ SR+ ++K ++G + + Sbjct: 374 YYYAAKLNATMEDLDLNLADFQARVNSDLVGKYVNIASRAAGFLIKRFEGRVQD----SA 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +L+ + +I + + + RAL Q + L V+ Y D KPWE K N Sbjct: 430 MNHPLLASLREAIPQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWEQAKDPANAVA 489 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +PKL + L +A Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPKLVEAVEAFLGIA 526 >gi|94311701|ref|YP_584911.1| methionyl-tRNA synthetase [Cupriavidus metallidurans CH34] gi|122987861|sp|Q1LJN4|SYM_RALME RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|93355553|gb|ABF09642.1| methionyl-tRNA synthetase [Cupriavidus metallidurans CH34] Length = 690 Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 136/516 (26%), Positives = 224/516 (43%), Gaps = 50/516 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 ++ +++A+ Y N Q HIGH E I D+ RF R+ G +V + D HG + A+ Sbjct: 5 RILVTSALPYANGQIHIGHLVEYIQTDIWVRFQRMMGNEVYYVGADDTHGTPVMLRAEKE 64 Query: 66 GVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T K +D+ + + RD + L +S+D++ T + + C ++ + + I + Sbjct: 65 GITPKQLIDRVWTEHKRDFDNFL-VSFDNYYSTDAEENRQLCEKIYLALKAEDLITERDV 123 Query: 125 SGWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME------ 161 +Y + D E K GA QY ++ NP + Sbjct: 124 EQFYDPVKNMFLPDRFIKGECPKCGAKDQYGDSCEVCGTTYVPTDLKNPYSVVSGATPVR 183 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-----KSGLKDLSLSRKTF 214 +FF+LS + ++ + E N++ ++ S L D +SR Sbjct: 184 KSSTHFFFKLS--DPRCETFLREWVADLAQPEASNKMQEWLGAEGEASTLSDWDISRDAP 241 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268 +G +IP P YVW+DA Y + L G W H IGKDIL Sbjct: 242 YFGFEIPGAPGKYFYVWLDAPIGYYASFKNLAEKRGIDFDAWVGPHSTAEQYHFIGKDIL 301 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LR 326 FH ++WPA L + P VF+HGF+ G K+SKS G I + + G++ LR Sbjct: 302 YFHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFIT-AQSYTDTGMNPEWLR 360 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + D RVN+DL N+ SR+ ++K +DG + A Sbjct: 361 YYFAAKLNASMEDLDLNLDDFVARVNSDLIGKYVNIASRAAGFLVKRFDGKV-NEAALA- 418 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 +L + ++ + + + +AL V+ L V+ + D KPWEL K R + Sbjct: 419 --NPLLEQLRQAAPQLAQYYEGREYSKALRLVMELTDAVNAFVDTNKPWELAKDESKRDA 476 Query: 446 --TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 V++E R L I L+ VP +A + L V Sbjct: 477 LHAACSVSLEAFRLLTIYLKPVVPTMAAGVERFLNV 512 >gi|298370508|ref|ZP_06981824.1| methionine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] gi|298281968|gb|EFI23457.1| methionine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] Length = 685 Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 129/511 (25%), Positives = 222/511 (43%), Gaps = 54/511 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + D I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 + + + D V G + + ++P + + Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182 Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209 E E +FF+L D L ++ ++ P L E N++ ++ G L D + Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263 SR +G +IPD P YVW+DA Y+ + L + G +++ AD H I Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFI 300 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 GKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360 Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439 S ++L+ + + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 420 ----SGSTLLAKLAAESETIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEG 475 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 476 QDERLHEVCSELINAFTMLTAYLAPVLPQTA 506 >gi|295698760|ref|YP_003603415.1| methionyl-tRNA synthetase [Candidatus Riesia pediculicola USDA] gi|291157378|gb|ADD79823.1| methionyl-tRNA synthetase [Candidatus Riesia pediculicola USDA] Length = 543 Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 122/517 (23%), Positives = 225/517 (43%), Gaps = 58/517 (11%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++ + ++ A Y N H+GH E I AD+ R+ ++ G +VLF + D HG I A Sbjct: 2 KKKTILVTCAFPYSNGPIHLGHLLEHIQADIWVRYRKMKGEEVLFMSSDDSHGAAIMLKA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + + + + + ++ IS+D + T + + + + ++ + +G I K Sbjct: 62 IDLDMDPSKMIQKMHKEHKEDLLKFSISHDIYCSTNDLENKNITQKIYLILKKRGYIKKK 121 Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNA----------QHNP 156 S Y ++ ++ D KG + QY YN+ +P Sbjct: 122 IVSQLYD-SEKKFFLPDRFVKGNCPNCLSPDQYGDNCEICGVVYNSTDLLHPRSILSQSP 180 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 ++ + + F LS +Q KL + P +N+ I ++ GLKD +SR + Sbjct: 181 LKIKKTKHIFLILSKFQKKLFEWINCMP---FSQSVKNKSIEWISKGLKDWDISRDDPYF 237 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVIGKDILRF 270 G KIP++ + YVW+DA Y+ ++ L S +FW + H IGKDI+ F Sbjct: 238 GFKIPEEKRKYFYVWLDATIGYIASSRTLFKKRKISFQRFWKNNSEDLLFHFIGKDIIYF 297 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H ++WP+ L P +F HG + G+K+SKS GN I ++ D LRY+ Sbjct: 298 HTLFWPSILEGIKYRKPNNIFVHGHLTVDGQKMSKSKGNFISANSYLKHFDSDYLRYYFA 357 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--------DGMIPTPG 381 +++ +D ++ ++N +L N I NL SR+ S I K + D M Sbjct: 358 SKLSSKFEDVNFNLTDFSNKINKELINKIINLASRNASFIKKYFCNYLSKKLDNMFLYQK 417 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK-KTN 440 ES ++I ++ + + A+ ++ L ++Y + PW++ K Sbjct: 418 FIKES------------KKIEQSFISLNFNSAVKRICFLSDLANKYVEMCSPWKIDPKLE 465 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + + + + L L +PK+A + + L Sbjct: 466 NKKMHEICSTGINLFKILMTYLSPILPKIAERSSNFL 502 >gi|46446299|ref|YP_007664.1| putative methionine-tRNA ligase [Candidatus Protochlamydia amoebophila UWE25] gi|68565984|sp|Q6MDG0|SYM_PARUW RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|46399940|emb|CAF23389.1| putative methionine-tRNA ligase [Candidatus Protochlamydia amoebophila UWE25] Length = 698 Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 137/507 (27%), Positives = 226/507 (44%), Gaps = 34/507 (6%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +K+ I++A+ Y N H GH A + AD ARF RL DVL+ G+DE+G I +A Sbjct: 12 QKILITSALPYANGPLHFGHIAGAYLPADCYARFQRLMKKDVLYICGSDEYGIAITLSAD 71 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T + VD + + L IS+D + RTT K H + + + G I + Sbjct: 72 LAGRTPQEHVDLFHHINQSFFEQLQISFDHYSRTTWKGHVEPTHQFFNDLLQNGYIEERT 131 Query: 124 YSGWYSLRDEAYYNDD-----------EVYKGAD----GQYYNAQH--NPVQWMEEEGYF 166 YS +D+ + D E +G + G Y A NP + + Sbjct: 132 TDQLYSEKDQKFLADRYVVGTCPRCGFENARGDECPCCGASYEATELKNPRSKLTDASLI 191 Query: 167 FRLSAYQDKLLSYYESH-PEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WGIKIP-- 221 R + + LL ++ E++ + VI+F++ + L T D WGI +P Sbjct: 192 LRPTKHWFLLLEKFKKPLMEWLETKNWKPNVINFIRGYIDHLHARAITRDMKWGISVPLP 251 Query: 222 DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW--PAD--LHVIGKDILRFHAIY 274 D ++YVW DA Y++ T L + K+W P ++ IGKD + FHA Sbjct: 252 DSEGKVLYVWFDAPIGYISATKEWALLRGEEKLWEKYWLDPETKLVNFIGKDNIPFHASI 311 Query: 275 WPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 +PA ++ N P L ++ ++ F +G++ SKS G ID + + D +RY + Sbjct: 312 FPAMIMGQNQPYKLVDELPANEFYNLEGKQFSKSDGWYIDLEDFFKHYTSDQIRYAIASN 371 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + + R N+DL GNLV+R + I G +P G E D L Sbjct: 372 APETSDSEFTWKDFQLRCNSDLLGKYGNLVNRVLVFIHNQCQGKVPESGVLEEQDRKFLK 431 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450 ++ + + + +A ++ L + YFD++KPW+ K + R T L Sbjct: 432 NIQDLVDQAAASYSTFKVRKASQIMMELSQLGNVYFDSKKPWQDAKNDYTKGRMHTTLNC 491 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477 +E ++ LA++ +P A+K++ L Sbjct: 492 CMECLKALALISFPIIPTAASKVWQFL 518 >gi|220917741|ref|YP_002493045.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] gi|219955595|gb|ACL65979.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] Length = 694 Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 139/516 (26%), Positives = 222/516 (43%), Gaps = 59/516 (11%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++L +++A+ Y N H+GH E + DV RF R G DV + D HG I A Sbjct: 3 QRLLVTSALPYANGPIHLGHLVEYVQTDVYVRFRRACGDDVAYVCAADSHGTPIEVNAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T K FV++ + + + T + ++ + KG IYK Sbjct: 63 VGMTPKAFVEKYRAEQHADFHAFGVEFSTYYTTDSDENRRWAYRVYDALKAKGLIYKKSV 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQYYN---------------------AQHNPVQ 158 Y D + D V G QY + + +PV Sbjct: 123 EQLYCEVDRRFLPDRFVKGTCPKCGTPDQYGDVCEHCGTTYDPRELKDPYCAICRSSPVV 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216 + Y + ++ + + + P R E + + L+D ++R F + Sbjct: 183 RASDHAYVNLRKPDVNAVIHEWVNAEGHLEPAVR--EQVKGWLADLQDWCITRDAPYFGF 240 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGY---LDNPDGSK---AKF--------WPADL-H 261 + P+ P +YVW+DA YL++ + + PDG + A+F PA L H Sbjct: 241 PVTDPEFPGKFLYVWVDAPIGYLSSAEHYFAAEAPDGERLAPAEFERRYLAVGAPARLEH 300 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321 IGKDILRFHA++WPA L + L P ++ HG + GEK+SKS G + +E G Sbjct: 301 FIGKDILRFHAVFWPAMLWATGLKRPDRMPVHGHLTVNGEKMSKSRGTFVTGRTYLES-G 359 Query: 322 VDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 +D LRYF + G D D + R+NADLAN + NL SR V+ +L+ G + Sbjct: 360 LDPELLRYFYAANLGSGVSDLDLSLDEFRNRINADLANNVANLASR-VAALLQRLPGGVT 418 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELK 437 P D I + ++ R Q L R + +++S + V +R KPWE Sbjct: 419 AP-----LDPEIAAATREAVKGARAAYQ-VLETRDVVRLVSQAASVCNRRVQETKPWENP 472 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + +R +VLY T + + LA +L +P+ + + Sbjct: 473 AGDAER--SVLYTTGKALLGLARVLAPILPRFSAAL 506 >gi|52218647|dbj|BAD51240.1| methionyl-tRNA synthetase [Bacteroides fragilis YCH46] Length = 654 Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 130/486 (26%), Positives = 227/486 (46%), Gaps = 44/486 (9%) Query: 29 IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD 88 + AD+ R+ RL DVLF G+DEHG I A+ G+T + VD+ + + Sbjct: 6 VPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGITPQDVVDRYHFLIKKSFEEFG 65 Query: 89 ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-----YK 143 IS+D + RT+ K HH+ +KK+ +KG+ + +Y + D + + Sbjct: 66 ISFDVYSRTSSKTHHELASDFFKKLYEKGEFIEKTSEQYYDEEAHQFLADRYITGECPHC 125 Query: 144 GADGQYYN---------------------AQHNPVQWMEEEGYFFRLSAYQDKLLSY-YE 181 ++G Y + + PV E + ++ L ++ L + E Sbjct: 126 HSEGAYGDQCEKCGTSLSPTDLINPKSAISGSKPVM-KETKHWYLPLDKHETWLRQWILE 184 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYL 239 H E+ + + S++ GL+ ++SR DWGI +P + ++YVW DA Y+ Sbjct: 185 EHKEWRPNV--YGQCKSWLDMGLQPRAVSR-DLDWGIPVPVEGAEGKVLYVWFDAPIGYI 241 Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSH 293 + T L PD + W D +H IGKD + FH I +PA L + + LP V S+ Sbjct: 242 SNTKEL-LPDSWET--WWKDPETRLVHFIGKDNIVFHCIVFPAMLKAEGSYILPDNVPSN 298 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 F+ +G+KIS S + E +E+ D LRY L KD + + R N Sbjct: 299 EFLNLEGDKISTSRNWAVWLHEYLEDFPGKQDVLRYVLTANAPETKDNDFTWKDFQARNN 358 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +L GN V+R++ + K ++G +P G T+ D+ L S V E+ + + Sbjct: 359 NELVAVYGNFVNRAMVLTQKYFEGKVPAAGELTDYDKETLKEFSDVKAEVEKLLNVFKFR 418 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 A + ++L ++Y +PW+L KT+ +R T+L ++++++ LAI + F+P + Sbjct: 419 DAQKEAMNLARIGNKYLADTEPWKLAKTDMERVGTILNISLQLVANLAIAFEPFLPFSSE 478 Query: 472 KIFDIL 477 ++ +L Sbjct: 479 RLRQML 484 >gi|315927701|gb|EFV07030.1| methionyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 380 Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 83/218 (38%), Positives = 132/218 (60%), Gaps = 2/218 (0%) Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316 PA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+ +GEK+SKS GNV+ P EV Sbjct: 1 PAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGNVVKPKEV 60 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 ++ G +A RYFL+RE+ G DG + ++ L R+NA+L+N GNL++R + M K G Sbjct: 61 VDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNRIIGMSTKYSQGN 120 Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 I G + L+ L E ++N +R L ++ +S + +PW L Sbjct: 121 ISKEGVLKFYNAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVANLAISKYEPWSL 179 Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 K N ++A+ ++ + ++ + ++LL +PK + K+ Sbjct: 180 IKENKHEQANALVALCANILAKTSLLLSPTLPKSSQKV 217 >gi|169829851|ref|YP_001700009.1| methionyl-tRNA synthetase [Lysinibacillus sphaericus C3-41] gi|168994339|gb|ACA41879.1| Methionyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41] Length = 551 Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 135/540 (25%), Positives = 233/540 (43%), Gaps = 48/540 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R + I A Y N H+GH ++ D+LAR++R G VL+ +G+D +G I+ A Sbjct: 7 RMTIVIGGAWPYANGSLHLGHVAALLPGDILARYYRQKGEQVLYVSGSDCNGTPISIRAA 66 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 TT+ + F+ + L +YD + RT + HH++ + L+ ++ +YK Sbjct: 67 QENTTTEAIANHYHEEFKKCFNKLGFTYDLYTRTDAEHHHESVKGLFLQLLANHFLYKKK 126 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH--NPVQWM------------- 160 Y D+ + D V K Q N +P+ + Sbjct: 127 IEQAYCETDQQFLPDRFVEGICPNCGAKARGDQCDNCSEILDPLDLIDKSCKICGNEPVI 186 Query: 161 -EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E ++F S +Q KL S+ E+ E ++ G+ D +++R + GI Sbjct: 187 RETEHFYFTFSQFQGKLESFLSEAKAEKRWRDNALGLTERYLAEGVPDRAVTRDLPN-GI 245 Query: 219 KIPDDPQY---IMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPADL---HVIGKDILRFH 271 +P P + +YVWI+A+ YLT + + + W + +V GKD + FH Sbjct: 246 DVPV-PGFDGKKIYVWIEAVAGYLTASLEWAKQHHMAIEDLWNEETISYYVHGKDNIPFH 304 Query: 272 AIYWPAFLLSANL-PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 + WPA L+ + LP + S+ ++ + K+S S + ++ D++RYFL Sbjct: 305 TVIWPAILMGLGVQALPTHIVSNEYLTLEKRKLSTSQNWAVWVPYILSRYDADSIRYFLT 364 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + N +L GN V+R++ I K + +P E D +I Sbjct: 365 TNAPENRDTDFSWREFIYSHNGELLGAYGNFVNRTLKFIEKSFASQVPQ----AEVDSTI 420 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 ++ E+ ++ +AL + + +RYFD Q+PW K N + + L Sbjct: 421 RKQTIQLFNEVGILIEGGRFKQALETIFEYIRGANRYFDEQQPWLQVKENVEAGNCTLAT 480 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 V +I L LLQ F+P A K+ D+L + DE + ++ L KT + I P F Sbjct: 481 CVYIIANLGQLLQPFLPFSAAKVRDMLGI-DEIMWHEQVE--------LPKTIEDITPLF 531 >gi|240114715|ref|ZP_04728777.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|268600362|ref|ZP_06134529.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|268584493|gb|EEZ49169.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID18] Length = 684 Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 130/512 (25%), Positives = 223/512 (43%), Gaps = 56/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + + Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 181 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 239 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262 +SR +G +IPD P YVW+DA Y+ + L + G +++ AD H Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 299 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359 Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 360 PEWMRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV 419 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439 S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 420 -----SGSALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 474 Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 475 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506 >gi|240116915|ref|ZP_04730977.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID1] Length = 700 Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 130/512 (25%), Positives = 222/512 (43%), Gaps = 56/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 20 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 79 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 80 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 137 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + Sbjct: 138 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPE 197 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 198 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGGETTLSDWD 255 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262 +SR +G +IPD P YVW+DA Y+ + L + G +++ AD H Sbjct: 256 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 315 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 316 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 375 Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 376 PEWMRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV 435 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439 S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 436 -----SGSALLAKLAAESNNIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 490 Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 491 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 522 >gi|148244673|ref|YP_001219367.1| methionyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] gi|187651803|sp|A5CWL9|SYM_VESOH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|146326500|dbj|BAF61643.1| methionyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] Length = 545 Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 133/548 (24%), Positives = 246/548 (44%), Gaps = 65/548 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N + H+GH E I D+ RF ++ G + + D HG I A Sbjct: 5 KILVTSALPYANGEIHLGHLLEYIQTDIWVRFQKMMGNECHYVCADDAHGTAIMLKADEL 64 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 +T +V + S + I + + T + + D ++ K++ G I S Sbjct: 65 DITPEVLIKNMSNKHQIDFQSFSIDFSQYHSTHSQENKDISTNIYNKLNVAGFIKTRVIS 124 Query: 126 GWYSLRDEAYYND-----DEVYKGADGQY------YNAQHNPVQW--------------M 160 + + + D D G++ QY A ++ ++ Sbjct: 125 QAFDPLKQMFLADRFIKGDCPKCGSNEQYGDNCEVCGATYSSIELKNAKSVISGVTPITK 184 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + E YFF L ++ +L + ++ L N++ + K GL+ +SR +G +I Sbjct: 185 DSEHYFFDLPQFEVQLKEWTKAGH---LQDAISNKLSEWFKEGLQQWDISRDAPYFGFQI 241 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274 P YVW+DA Y+ + L D + +++ D H IGKDI+ FHA++ Sbjct: 242 PAVEGKYFYVWLDAPIGYMASFKKLCDEQNIDFNEYFNKDSNTELYHFIGKDIIYFHALF 301 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L+ +N P +F+HGF+ G+K+SKS G I + + + LRY+ +++ Sbjct: 302 WPAMLIGSNYRTPSAIFAHGFLTINGQKMSKSRGTFIQARTYLNYLNPEYLRYYYAYKLS 361 Query: 335 CGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + K+R+N+DL + N+ SRS I+K ++ + S ++ Sbjct: 362 SKIDDIDLNLIDFKQRINSDLVGKVVNIASRSAGFIVKKFNKTL-----------SSYTI 410 Query: 394 CSRVLQE-------IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 S+ QE I ++ + + ++A+ +I L ++ ++Y D KPW+L K P++ + Sbjct: 411 ESKFYQEFFDCGDIIAKHYEARNYNQAMRVIIKLANKANQYIDKHKPWQLIK-KPNQQTQ 469 Query: 447 VLYVT---VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK-- 501 V VT + + R L L+ +P +A ++ L + + + Q LK + H+ Sbjct: 470 VHDVTSLAINLFRVLMTYLKPVLPIMAKQVEKFLNIDELHW------QDLKYPLIKHQIN 523 Query: 502 TFDPIFPR 509 TF P+ R Sbjct: 524 TFKPLMLR 531 >gi|327312639|ref|YP_004328076.1| methionine--tRNA ligase [Prevotella denticola F0289] gi|326945094|gb|AEA20979.1| methionine--tRNA ligase [Prevotella denticola F0289] Length = 687 Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 129/520 (24%), Positives = 238/520 (45%), Gaps = 43/520 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ ++ A+ Y N HIGH A + AD+ R+ RL +V+F G+DEHG I Sbjct: 4 KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKREVVFIGGSDEHGVPITI 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GVT + D+ + +D + IS+D + RTT H+ ++K+ D G + Sbjct: 64 RAKKEGVTPQDVCDRYHKLIKDSFEEFGISFDVYSRTTSPTHNKFASDFFRKLYDDGKLV 123 Query: 121 KGCYSGWYSLRDEAYYND----DEVYKGADGQYYNAQ-------------HNPVQWM--- 160 + +Y + D E + Y Q NP + Sbjct: 124 EKESEQYYDEEARQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTISGS 183 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + + ++ L+ YQ+ L + E H E+ + + S++ L+ +++R Sbjct: 184 QPVIRKTKNWYLPLNNYQEWLKQWILEDHKEWRPNV--YGQCKSWLDMDLQPRAMTRD-L 240 Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----LHVIG 264 DWGI +P + ++YVW DA Y++ T L + D GS K+W +H IG Sbjct: 241 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDSDPERFGSWQKWWQDPETRLVHFIG 300 Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE--EVG 321 KD + FH + +P L + LP V ++ F+ + KIS S + E + E Sbjct: 301 KDNIVFHCLIFPTMLKAHGGYILPDNVPANEFLNLEDNKISTSKNWAVWLHEYLRDFEGK 360 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D LRY L KD + ++R N++L GN V+R++ + K +DG++P G Sbjct: 361 QDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWDGVVPACG 420 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 + D + V +++ ++ A + ++L ++Y +PW++ KT+P Sbjct: 421 ELHDVDRQAIQEFKDVKEKLEAYLEAFKFREAQKEAMNLARIGNKYITECEPWKVWKTDP 480 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 R T+L ++++++ L+I + F+P + K+ ++ + + Sbjct: 481 KRVETILNLSLQLVANLSIAFEPFLPFSSKKLRSMINMTE 520 >gi|311108811|ref|YP_003981664.1| methionyl-tRNA synthetase [Achromobacter xylosoxidans A8] gi|310763500|gb|ADP18949.1| methionyl-tRNA synthetase [Achromobacter xylosoxidans A8] Length = 688 Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 145/568 (25%), Positives = 247/568 (43%), Gaps = 80/568 (14%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 L+++TA+ Y N HIGH E I AD+ R R+ G V F D HG I A+ G Sbjct: 5 LFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEKEG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH----HDTCRIL-------WKKISD 115 +T + V + + + I +D + T + D R L + I Sbjct: 65 ITPQALVARYAAERPQYLNGFHIRFDHWHSTDSAENVALSQDIYRALKAQDLIETRSIEQ 124 Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------------E 161 D KG + ++ E + G + A + P + + Sbjct: 125 FYDPVKGMFLADRYIKGECPKCHAKDQYGDSCEVCGAVYAPTELINPYSALTGATPVLKS 184 Query: 162 EEGYFFRLSAYQD-KLLSYYESHPEFILPIERRNEVISFVK---------SGLKDLSLSR 211 + +FF+LS + + L + + + E+++ + + L D +SR Sbjct: 185 SDHFFFKLSDPRCVEFLQQWTTGSNAAGGKHLQPEMLAKTREWLGSDDGEAKLGDWDISR 244 Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-----------LDNPDGSKAKFWPADL 260 +GI+IPD P YVW+DA YL + L +P G + + Sbjct: 245 DAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAVKGLDFDKLLDPAGPTEQ-----V 299 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 H IGKDI+ FHA++WPA L A P V HGFI GEK+SKS G I P+ + E+ Sbjct: 300 HFIGKDIVYFHALFWPAMLKFAGRKTPDAVNVHGFITVSGEKMSKSRGTGISPLRYL-EL 358 Query: 321 GVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 G++A +RY++ ++ A +D ++ + RVN+DL N+ SR+ S I K +DG++ Sbjct: 359 GMNAEWMRYYIAAKLNARVEDMDFNPEDFIARVNSDLIGKYVNIASRAASFITKHFDGVL 418 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 ++ ++ + + + IR + + +RA+ ++++ +++ FD +PW L Sbjct: 419 ----GYSGDTSALAAEYAEQAESIRAAFEAREYNRAIREIMAYADRLNQAFDTAQPWVLA 474 Query: 438 K---TNPDRASTVLY----VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN------- 483 K T D L ++ + L+++L +P+LA ++ LF A Sbjct: 475 KGIATADDAQKAALQDICSRSLAGFKALSVMLAPVLPELAERVALELFGAQAPFTWADAA 534 Query: 484 ------RCFQSLDQRLKPGFMLHKTFDP 505 F+ L QR++P ML F+P Sbjct: 535 VLPQRVAPFKHLMQRVEPQ-MLEDLFEP 561 >gi|258647690|ref|ZP_05735159.1| methionine--tRNA ligase [Prevotella tannerae ATCC 51259] gi|260852523|gb|EEX72392.1| methionine--tRNA ligase [Prevotella tannerae ATCC 51259] Length = 680 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 139/519 (26%), Positives = 232/519 (44%), Gaps = 55/519 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + I+ A+ Y N HIGH A I +D+ AR+ RL VLF G+DEHG I Sbjct: 4 KTFNRTLITAALPYANGGVHIGHLAGVYIPSDIYARYLRLRNKPVLFICGSDEHGVPITI 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ T + VD+ + +D + IS+D + RTT H T ++ + DKG+ Sbjct: 64 RARREHCTPQDVVDRYHKLIKDSFEAFGISFDIYSRTTSAVHEKTATEFFRTLYDKGEFI 123 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ----HNPVQWMEE-EGYFFRLSAYQ-- 173 + ++ Y D+E +Y + H P + ++ E LS + Sbjct: 124 E---------KESEQYYDEEAKTFLADRYITGECPHCHKPGAYGDQCENCGTALSPLELI 174 Query: 174 DKLLSYYESHP------EFILPIER----------------RNEVISFVKS----GLKDL 207 + + S P + LP+++ R+ VI KS GL+ Sbjct: 175 NPQSAISGSKPVLRTTKHWYLPLDKHQPWLEKWILGEHADWRSNVIGQCKSWFDMGLQPR 234 Query: 208 SLSRKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LH 261 ++SR DWGI +P + ++YVW DA Y++ T L D +W +D +H Sbjct: 235 AVSRD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTRELLPNDWET--WWKSDDTRLVH 291 Query: 262 VIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 IGKD + FH I +PA L + LP V S+ F+ + KIS S + E + + Sbjct: 292 FIGKDNIVFHCIVFPAMLKAHGEYVLPDNVPSNEFLNLEDRKISTSRNWAVWLHEYLTDF 351 Query: 321 --GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 D LRY L KD + + R N +L GN V+R++ + K Y G +P Sbjct: 352 PDKQDVLRYVLTANAPETKDNNFTWKDFQARNNNELVAVYGNFVNRALVLTHKYYGGEVP 411 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 G DE+ ++ V ++ + + A + ++L ++Y +PW++ K Sbjct: 412 ACGTLLPEDEATIAEFKDVKDKVEYLLDHFRFRDAQKEAMNLARIGNKYLTDAEPWKVIK 471 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 T+P+R T+LY+ ++++ LA F+P + ++ +L Sbjct: 472 TDPERVKTILYIALQLVANLATAFAPFLPFSSERLRRML 510 >gi|240120254|ref|ZP_04733216.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1] Length = 700 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 130/512 (25%), Positives = 223/512 (43%), Gaps = 56/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 20 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 79 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 80 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 137 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + + Sbjct: 138 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 197 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 198 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 255 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262 +SR +G +IPD P YVW+DA Y+ + L + G +++ AD H Sbjct: 256 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 315 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 316 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 375 Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 376 PEWMRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV 435 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439 S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 436 -----SGSALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 490 Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 491 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 522 >gi|319779090|ref|YP_004130003.1| Methionyl-tRNA synthetase [Taylorella equigenitalis MCE9] gi|317109114|gb|ADU91860.1| Methionyl-tRNA synthetase [Taylorella equigenitalis MCE9] Length = 693 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 131/523 (25%), Positives = 226/523 (43%), Gaps = 58/523 (11%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++ +TA+ Y N HIGH E I AD+ R R+ G V F D HG I AQ G Sbjct: 5 IFATTALPYANGSFHIGHIMEFIQADIWVRAMRMFGHKVYFMGADDAHGAPIMLKAQAEG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--------- 117 +T + V + + + I +D + T + + + ++K + G Sbjct: 65 ITPEELVSRIASERPQYLNGFQIKHDFWHSTHSTENIEVSQNIYKALKKNGFISTKTIEQ 124 Query: 118 --DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME-------------- 161 D KG + ++ E + G + A + P +E Sbjct: 125 FFDPIKGMFLPDRYIKGECPKCHAKDQYGDSCEVCGAVYAPTDLIEPYSTLTKASPELRT 184 Query: 162 EEGYFFRLSAYQD-KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---- 216 E +FF LS + + L + ++ + + EV++ K L D K DW Sbjct: 185 SEHFFFNLSDPRCIQFLHDWTNNSGNLNKTHLQGEVLAKTKEWLGDSESDSKLGDWDISR 244 Query: 217 -----GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG------SKAKFWPADLHVIGK 265 GI IPD+ YVW+DA YL +G K + +H IGK Sbjct: 245 DAPYFGIPIPDEKDKYFYVWLDAPAGYLAALKAYTKKEGLDYDSIVDPKGETSQIHFIGK 304 Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA- 324 DI+ FHA++WPA L ++ +P ++ HGFI KGEK+SKS G I P++ + VG++ Sbjct: 305 DIIYFHALFWPAMLKFSDRKVPDRIQVHGFITVKGEKMSKSRGTGISPLKYL-SVGLNPA 363 Query: 325 -LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY++ +++ +D + + RVN+DL N+ SR+ + I + +DG + Sbjct: 364 YLRYYIAAKLSAKVEDVDFTAEDFMVRVNSDLVGKYVNIASRASTFINRFFDGHL----- 418 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 + E ++ E++ +++N +A+ +++ +V+ FD KPW L K + Sbjct: 419 -SFKTEEQFEEIKKLTDEVKADIENFEYSKAVRAIMAFADKVNTAFDQAKPWVLAKGFSE 477 Query: 443 RAST-------VLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 + + + + + LL P+L+ I++ LF Sbjct: 478 ASDETKAQLQDICSQAIAGFKAICTLLYPITPELSTSIYEDLF 520 >gi|317165158|gb|ADV08699.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107] Length = 719 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 130/512 (25%), Positives = 222/512 (43%), Gaps = 56/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 39 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 98 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 99 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 156 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + Sbjct: 157 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPE 216 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 217 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 274 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262 +SR +G +IPD P YVW+DA Y+ + L + G +++ AD H Sbjct: 275 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 334 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 335 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 394 Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 395 PEWMRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV 454 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439 S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 455 -----SGSALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 509 Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 510 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 541 >gi|197122949|ref|YP_002134900.1| methionyl-tRNA synthetase [Anaeromyxobacter sp. K] gi|196172798|gb|ACG73771.1| methionyl-tRNA synthetase [Anaeromyxobacter sp. K] Length = 694 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 139/517 (26%), Positives = 218/517 (42%), Gaps = 61/517 (11%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++L +++A+ Y N H+GH E + DV RF R G +V + D HG I A Sbjct: 3 QRLLVTSALPYANGPIHLGHLVEYVQTDVYVRFRRACGDEVAYVCAADSHGTPIEVNAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T K FV++ + + + T + ++ + KG IYK Sbjct: 63 VGMTPKAFVEKYRAEQHADFRAFGVEFSTYYTTDSDENRRWAYRVYDALKAKGLIYKKSV 122 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 Y D + D V Q+ V E G + +D + S P Sbjct: 123 EQLYCEVDRRFLPDRFVKGTCPKCGTPDQYGDV--CEHCGTTYDPRELKDPYCAICRSSP 180 Query: 185 ---------------------------EFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215 E L R +V ++ + L+D ++R F Sbjct: 181 VVRASDHAYVNLHKPDVNAVIHEWVNAEGHLEPAVREQVKGWL-ADLQDWCITRDAPYFG 239 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGY---LDNPDGSK-----------AKFWPADL- 260 + + P+ P +YVW+DA YL++ + + PDG + A PA L Sbjct: 240 FPVTDPEFPGKFLYVWVDAPIGYLSSAEHYFAAEAPDGERLAPAEFERRYLAAGAPARLE 299 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 H IGKDILRFHA++WPA L + L P ++ HG + GEK+SKS G + +E Sbjct: 300 HFIGKDILRFHAVFWPAMLWATGLKRPDRMPVHGHLTVNGEKMSKSRGTFVTGRTYLES- 358 Query: 321 GVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 G+D LRYF + G D D + R+NADLAN + NL SR V+ +L+ G + Sbjct: 359 GLDPELLRYFYAANLGSGVSDLDLSLDEFRNRINADLANNVANLASR-VAALLQRLPGGV 417 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWEL 436 P D I + ++ R Q L R + +++S + V +R KPWE Sbjct: 418 TAP-----LDPEIAAATREAVKGARAAYQ-ALETRDVVRLVSQAASVCNRRVQETKPWEN 471 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + +R +VLY T + + LA +L +P+ + + Sbjct: 472 PAGDAER--SVLYTTGKALLGLARVLAPILPRFSAAL 506 >gi|254282433|ref|ZP_04957401.1| methionyl-tRNA synthetase [gamma proteobacterium NOR51-B] gi|219678636|gb|EED34985.1| methionyl-tRNA synthetase [gamma proteobacterium NOR51-B] Length = 523 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 120/486 (24%), Positives = 209/486 (43%), Gaps = 43/486 (8%) Query: 27 EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADV 86 E I D+ RF R G + D HG I +A+ GVT +V +D+ + ++ Sbjct: 3 EQIQTDIWVRFQRSRGHQCHYVCADDAHGTAIMLSAERQGVTPEVLIDRVRSDHMASSEG 62 Query: 87 LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA- 145 + +D+F T + +++ + G I + ++ + D KG Sbjct: 63 FLVEFDNFYSTHSPENQQWSERIFRDLESGGHIAVREVIQAFD-EEKGLFLSDRFIKGTC 121 Query: 146 -----DGQY------YNAQHNPVQWME--------------EEGYFFRLSAYQDKLLSYY 180 GQY A + P ++ + FF+LS +Q+ L + Sbjct: 122 PTCKTAGQYGDNCEACGATYTPADLIDPVSALSGSVPIEKASDHIFFQLSHFQELLEGWV 181 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 + L N++ ++ +GL+D +SR + +G +IP P YVW+DA Y+ Sbjct: 182 ATDA---LQSAIANKLREWIDAGLQDWDISRDSPYFGFEIPGHPGKYFYVWLDAPIGYIA 238 Query: 241 T-TGYLDNPDGSKAKFW--PADL---HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 + +W P D H IGKDI+ FH ++WPA L A L +P +F HG Sbjct: 239 AWENHCQRTGEDFDSYWKSPTDTELYHFIGKDIINFHGLFWPAMLHCAGLRMPSAIFVHG 298 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNAD 353 F+ G K+SKS G I ++ + + LRY+ +++ G D + +RVN+D Sbjct: 299 FLTVDGTKMSKSRGTFIMARTYLDHLDPEYLRYYFAAKLSSGVDDIDLNLSDFVQRVNSD 358 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 L + N+ SR + K +D + A T + +++ I E+ +N +RA Sbjct: 359 LVGKVVNIASRCAGFLRKRFDNQL----ADTCDEPELVADFINQGSSIAEHYENLEFNRA 414 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 + +I+L ++Y D +KPW + K V V + + R L L+ +P +A Sbjct: 415 MRDIIALADRANQYIDEKKPWVMAKEEGRESEVQAVCSVGINLFRILMTYLKPVLPGMAE 474 Query: 472 KIFDIL 477 + D + Sbjct: 475 RAEDFM 480 >gi|78189366|ref|YP_379704.1| methionyl-tRNA synthetase [Chlorobium chlorochromatii CaD3] gi|123743436|sp|Q3AQR4|SYM_CHLCH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|78171565|gb|ABB28661.1| methionyl-tRNA synthetase [Chlorobium chlorochromatii CaD3] Length = 705 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 126/527 (23%), Positives = 232/527 (44%), Gaps = 59/527 (11%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M + ++TA+ Y N H+GH A + AD+ R+ RL G D++ G+DEHG I Sbjct: 4 MPHFSRTLVTTALPYANGPVHLGHLAGVYLPADLYVRYKRLKGEDIIHIGGSDEHGVPIT 63 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 +A+ G++ + VD+ D IS+D + RT+ HH T + + I KG Sbjct: 64 ISAEKEGISPRDVVDRYHAMNLDAFTRCGISFDYYGRTSSAVHHATAQEFFSDIEQKGIF 123 Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM-------- 160 + ++ L+ + +D V G + +P++ + Sbjct: 124 QQKTEKLFFDLQAGRFLSDRYVTGTCPVCNNPEANGDQCEQCGTHLSPLELLNPKSKLSD 183 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210 E ++F L +Q L Y SH E R V+++ K GL D +++ Sbjct: 184 ATPELRETLHWYFPLGRFQAALEEYVNSHEG-----EWRPNVVNYTRTWFKQGLNDRAIT 238 Query: 211 RKTFDWGIKIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------- 259 R DWG+ +P + ++YVW DA+ Y++ T G+ A+ W Sbjct: 239 RD-LDWGVAVPLQSAEAVGKVLYVWFDAVLGYISFTKEWAALQGN-AELWKTYWQDPETR 296 Query: 260 -LHVIGKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVI 311 +H IGKD + FH + +P+ L++ N L V + F+ +G K SKS + Sbjct: 297 LIHFIGKDNVVFHTLMFPSILMAWNEGKTTDCYNLADNVPASEFMNFEGRKFSKSRNYAV 356 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 E +++ D LRY + KD + + R N +LA+ +GN + RS+ Sbjct: 357 YLGEFLDKFPADTLRYSIAMNYPESKDTDFSWQDFQNRTNGELADTLGNFIKRSIDFTNT 416 Query: 372 DYDGMIPTPGAFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 ++G++ P + T+ + L + L+++ + A + + +RY + Sbjct: 417 RFEGVV--PASVTKEEWDNLGIDWQATLEQLDSAYEGFHFRDAATLGMEIARAANRYLTS 474 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +PW++ K + + A+T + +++ + L+I L +P+ N+I +L Sbjct: 475 SEPWKVIKVDREAAATTMALSLNLCHALSIALYPVIPETCNRIRAML 521 >gi|254672536|emb|CBA06112.1| Methionyl-tRNA synthetase [Neisseria meningitidis alpha275] Length = 717 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 128/511 (25%), Positives = 224/511 (43%), Gaps = 54/511 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 36 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQKQ 95 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + D I YD++ T + + +++ + G I Sbjct: 96 GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 154 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 + + + D V G + + ++P + + Sbjct: 155 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 214 Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209 E E +FF+L D L ++ ++ P L E N++ ++ G L D + Sbjct: 215 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 272 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263 SR +G +IPD P YVW+DA Y+ + L + G +++ AD H I Sbjct: 273 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFI 332 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 GKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 333 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 392 Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 393 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGCLKDV- 451 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439 +D ++L+ + + I E +++ +AL +++L V+ Y DA KPWEL K Sbjct: 452 ----ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEG 507 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +PK+A Sbjct: 508 QDERLHEVCSELINAFTMLTAYLAPVLPKVA 538 >gi|325860413|ref|ZP_08173525.1| methionine--tRNA ligase [Prevotella denticola CRIS 18C-A] gi|325482071|gb|EGC85092.1| methionine--tRNA ligase [Prevotella denticola CRIS 18C-A] Length = 687 Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 133/524 (25%), Positives = 235/524 (44%), Gaps = 51/524 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ ++ A+ Y N HIGH A + AD+ R+ RL +V+F G+DEHG I Sbjct: 4 KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKREVVFIGGSDEHGVPITI 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GVT + D+ + +D + IS+D + RTT H+ ++K+ D G + Sbjct: 64 RAKKEGVTPQDVCDRYHKLIKDSFEEFGISFDVYSRTTSPTHNKFASDFFRKLYDDGKLV 123 Query: 121 KGCYSGWYSLRDEAYYND----DEVYKGADGQYYNAQ-------------HNPVQWM--- 160 + +Y + D E + Y Q NP + Sbjct: 124 EKESEQYYDEEARQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTISGS 183 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213 + + ++ L+ YQ L + E H E+ R V KS L D+ L + Sbjct: 184 QPVIRKTKNWYLPLNNYQKWLKQWILEDHKEW------RPNVYGQCKSWL-DMDLQPRAM 236 Query: 214 ---FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----L 260 DWGI +P + ++YVW DA Y++ T L + D GS K+W + Sbjct: 237 TRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDSDPERFGSWQKWWQDPETRLV 296 Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE- 318 H IGKD + FH + +P L + LP V ++ F+ + KIS S + E + Sbjct: 297 HFIGKDNIVFHCLIFPTMLKAHGGYILPDNVPANEFLNLEDNKISTSKNWAVWLHEYLRD 356 Query: 319 -EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E D LRY L KD + ++R N++L GN V+R++ + K +DG++ Sbjct: 357 FEGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWDGVV 416 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G + D + V +++ ++ A + ++L ++Y +PW++ Sbjct: 417 PACGELHDVDRQAIQEFKDVKEKVEAYLEAFKFREAQKEAMNLARIGNKYITECEPWKVW 476 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 KT+P R T+L ++++++ L+I + F+P + K+ ++ + + Sbjct: 477 KTDPKRVETILNLSLQLVANLSIAFEPFLPFSSKKLRSMINMTE 520 >gi|240013183|ref|ZP_04720096.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae DGI18] Length = 684 Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 130/512 (25%), Positives = 223/512 (43%), Gaps = 56/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + + Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 181 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 239 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262 +SR +G +IPD P YVW+DA Y+ + L + G +++ AD H Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 299 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359 Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 360 PEWMRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV 419 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439 S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 420 -----SGSALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 474 Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 475 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506 >gi|187476981|ref|YP_785005.1| methionyl-tRNA synthetase [Bordetella avium 197N] gi|123752268|sp|Q2KYS4|SYM_BORA1 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|115421567|emb|CAJ48077.1| methionyl-tRNA synthetase [Bordetella avium 197N] Length = 691 Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 140/556 (25%), Positives = 244/556 (43%), Gaps = 65/556 (11%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 L+++TA+ Y N HIGH E I AD+ R R+ G V F D HG I A+ G Sbjct: 5 LFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEKEG 64 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--------- 117 +T + V + + D I +D + T + +++ + G Sbjct: 65 ITPQALVARYAAERPRYLDGFHIRFDHWHSTDSAENVALSHEIYRALKAAGLIETRSIEQ 124 Query: 118 --DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME-------------- 161 D KG + ++ E + G + A + P + ++ Sbjct: 125 FFDPVKGMFLADRYIKGECPRCHAKDQYGDSCEVCGAVYAPTELIQPYSALTGATPVLKR 184 Query: 162 EEGYFFRLSAYQD-KLLSYYESHPEFILPIERRNEVISFVK---------SGLKDLSLSR 211 + +FF+LS + + L + + ++EV + + + L D +SR Sbjct: 185 SDHFFFKLSDPRCVEFLQQWTTGSNRNGIKHLQSEVQAKTREWLGGEEGEAKLGDWDISR 244 Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNP--------DGSKAKFWPADLHV 262 +GI+IPD P YVW+DA YL + Y D D S A +H Sbjct: 245 DAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCDKIGLDFDALLDPSSAT---EQVHF 301 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 IGKDI+ FHA++WPA L A P + HGFI GEK+SKS G I P+ + EVG+ Sbjct: 302 IGKDIIYFHALFWPAMLKFAGRKTPDALNVHGFITVSGEKMSKSRGTGISPLRYL-EVGM 360 Query: 323 DA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 D LRY++ ++ A +D ++ + RVN+DL N+ SR+ + I + ++G + Sbjct: 361 DPEWLRYYMAAKLNARVEDMDFNPEDFIARVNSDLVGKYVNIASRAANFITRHFEGKL-- 418 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK- 438 A+ ++ + ++ + IR ++ + +RA+ ++++ +++ FDA +PW L K Sbjct: 419 --AYLGDTAALSAEFAQQTESIRAALEAREFNRAIREIMAYADGINQAFDAAQPWVLAKG 476 Query: 439 -TNPDRA-----STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ---SL 489 D A + + + L+++L +P L +++ LF A + + L Sbjct: 477 FAEADEARRAQLQDICSRALAGFKALSVMLAPVLPALTSRVARDLFGAQRDFIWSDAADL 536 Query: 490 DQRLKPGFMLHKTFDP 505 ++ P L + DP Sbjct: 537 PAQVAPFKHLMQRVDP 552 >gi|268602591|ref|ZP_06136758.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID1] gi|268586722|gb|EEZ51398.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID1] Length = 684 Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 130/512 (25%), Positives = 222/512 (43%), Gaps = 56/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPE 181 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGGETTLSDWD 239 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262 +SR +G +IPD P YVW+DA Y+ + L + G +++ AD H Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 299 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359 Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 360 PEWMRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV 419 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439 S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 420 -----SGSALLAKLAAESNNIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 474 Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 475 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506 >gi|268595679|ref|ZP_06129846.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|268549068|gb|EEZ44486.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] Length = 700 Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 130/512 (25%), Positives = 222/512 (43%), Gaps = 56/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 20 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 79 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 80 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 137 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + Sbjct: 138 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPE 197 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 198 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 255 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262 +SR +G +IPD P YVW+DA Y+ + L + G +++ AD H Sbjct: 256 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 315 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 316 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 375 Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 376 PEWMRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV 435 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439 S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 436 -----SGSALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 490 Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 491 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 522 >gi|325268659|ref|ZP_08135289.1| methionine--tRNA ligase [Prevotella multiformis DSM 16608] gi|324989187|gb|EGC21140.1| methionine--tRNA ligase [Prevotella multiformis DSM 16608] Length = 712 Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 128/520 (24%), Positives = 238/520 (45%), Gaps = 43/520 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ ++ A+ Y N HIGH A + AD+ R+ RL +V+F G+DEHG I Sbjct: 29 KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKREVVFIGGSDEHGVPITI 88 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ GVT + D+ + +D + IS+D + RTT H+ ++K+ D G + Sbjct: 89 RAKKEGVTPQDVCDRYHKLIKDSFEEFGISFDVYSRTTSPTHNKFASDFFRKLYDDGKLV 148 Query: 121 KGCYSGWYSLRDEAYYND----DEVYKGADGQYYNAQ-------------HNPVQWM--- 160 + +Y + D E + Y Q NP + Sbjct: 149 EKESEQYYDEEARQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTISGS 208 Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + + ++ L+ YQ+ L + + H E+ + + S++ L+ +++R Sbjct: 209 QPVIRKTKNWYLPLNNYQEWLKQWILKDHKEWRPNV--YGQCKSWLDMDLQPRAMTRD-L 265 Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----LHVIG 264 DWGI +P + ++YVW DA Y++ T L + D GS K+W +H IG Sbjct: 266 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDSDPERFGSWQKWWQDPETRLVHFIG 325 Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE--EVG 321 KD + FH + +P L + LP V ++ F+ + KIS S + E + E Sbjct: 326 KDNIVFHCLIFPTMLKAHGGYILPDNVPANEFLNLEDNKISTSKNWAVWLHEYLRDFEGK 385 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D LRY L KD + ++R N++L GN V+R++ + K +DG++P G Sbjct: 386 QDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWDGVVPACG 445 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 + D + V +++ ++ A + ++L ++Y +PW++ KT+P Sbjct: 446 ELHDVDRQTIQEFKDVKEKVEAYLEAFKFREAQKEAMNLARIGNKYITECEPWKVWKTDP 505 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 R T+L ++++++ L+I + F+P + K+ ++ + + Sbjct: 506 KRVETILNLSLQLVANLSIAFEPFLPFSSKKLRSMINMTE 545 >gi|227830547|ref|YP_002832327.1| methionyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15] gi|229579360|ref|YP_002837758.1| methionyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14] gi|229581880|ref|YP_002840279.1| methionyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51] gi|238620010|ref|YP_002914836.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.16.4] gi|227456995|gb|ACP35682.1| methionyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15] gi|228010074|gb|ACP45836.1| methionyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14] gi|228012596|gb|ACP48357.1| methionyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51] gi|238381080|gb|ACR42168.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.16.4] Length = 631 Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 138/522 (26%), Positives = 251/522 (48%), Gaps = 54/522 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAA 62 K+ +++A Y N+ PH+G+ I+ ADV AR+ RL +VLF +G+DEHG I A Sbjct: 60 KVLVTSAWPYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSGSDEHGTPIEIEA 119 Query: 63 QNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI-- 119 V K DQ + + +V IS+D++ RT + H R K++ + Sbjct: 120 IKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESETHKKFVREFLLKLTKYVKVSE 179 Query: 120 -----------------YKGC--YSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHNPV 157 KG Y G+ R + N ++ + + + P+ Sbjct: 180 DEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGKAPI 239 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + + + +FF LS + +K+ S+ S E +P ++ + +V GLK S++R WG Sbjct: 240 -FKKSKHWFFDLSEFNEKIRSWISSSNE--MPDNVKSVALGWVSEGLKPRSITRDN-KWG 295 Query: 218 IKIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPAD----LHVIGKD 266 I P +D +YVW +AL Y++ G K +W ++ + IGKD Sbjct: 296 IPAPFIGAEDKS--IYVWFEALLGYISAVIEYFEKKGEVEKWKEYWFSNDIKSYYFIGKD 353 Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGV 322 + FH + PA L+++ LP + + ++L++G+K SKS +G ID E E + V Sbjct: 354 NIPFHVVILPAMLMASGEEYHLPDVIAATEYLLYEGQKFSKSRKIGVWID--EAPELMDV 411 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--P 380 + R+ L+R KD + + VN +L + IGN V+R +SM+ + Y+G++P Sbjct: 412 EYWRFVLIRLRPEEKDTNFTWRETVRIVNTELNDDIGNYVNRILSMLNRYYNGIVPEFRS 471 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 A ++D+ I+S+ + + + + + + + +++ V E + Y + + PW+L K Sbjct: 472 DALDDNDKKIISLINEIPKIVGDLFEKGKLKAGTEEMLRFVRECNAYLNLKAPWDLYKAG 531 Query: 441 PD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 + + LY+ V ++ +AILL +P A +I+D+L + + Sbjct: 532 KEVELNNTLYIGVNSVKTIAILLYPLMPSHAQEIYDMLNMGN 573 >gi|229523177|ref|ZP_04412584.1| methionyl-tRNA synthetase [Vibrio cholerae TM 11079-80] gi|229339540|gb|EEO04555.1| methionyl-tRNA synthetase [Vibrio cholerae TM 11079-80] Length = 658 Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 130/483 (26%), Positives = 211/483 (43%), Gaps = 46/483 (9%) Query: 27 EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF-RDMAD 85 E I AD+ R+ RL G V F D HG I AQ G+T + ++ S RD A Sbjct: 3 EHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMGMTPEAMIEMVSEEHQRDFAG 62 Query: 86 VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG- 144 DIS+D++ T + + ++ ++ G I S + E + D V KG Sbjct: 63 -FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQLFDPEKEMFLPDRFV-KGT 120 Query: 145 ---------------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSY 179 A G+ Y+ NP + + E +FF L ++ L + Sbjct: 121 CPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEW 180 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 S L E N++ + + GL+ +SR +G +IP + YVW+DA Y+ Sbjct: 181 TRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYM 237 Query: 240 TTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 + L + G ++W D H IGKDI+ FH+++WPA L + P VF Sbjct: 238 GSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFHSLFWPAMLDGSGFRKPTNVFV 297 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVN 351 HG++ G K+SKS G + + + + LRY+ ++ D + + +RVN Sbjct: 298 HGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVN 357 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 AD+ N I NL SR+ I K +DG + A E R I E + + Sbjct: 358 ADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEFAGAADR----IAELFETREFG 413 Query: 412 RALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKL 469 RA+ ++ +L + ++Y D + PW + K+ D+A + V + + R L L+ +P L Sbjct: 414 RAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGINLFRVLMTYLKPVMPAL 473 Query: 470 ANK 472 A + Sbjct: 474 AER 476 >gi|284998042|ref|YP_003419809.1| hypothetical protein LD85_1778 [Sulfolobus islandicus L.D.8.5] gi|284445937|gb|ADB87439.1| hypothetical protein LD85_1778 [Sulfolobus islandicus L.D.8.5] Length = 585 Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 138/522 (26%), Positives = 251/522 (48%), Gaps = 54/522 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAA 62 K+ +++A Y N+ PH+G+ I+ ADV AR+ RL +VLF +G+DEHG I A Sbjct: 14 KVLVTSAWPYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSGSDEHGTPIEIEA 73 Query: 63 QNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI-- 119 V K DQ + + +V IS+D++ RT + H R K++ + Sbjct: 74 IKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESETHKKFVREFLLKLTKYVKVSE 133 Query: 120 -----------------YKGC--YSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHNPV 157 KG Y G+ R + N ++ + + + P+ Sbjct: 134 DEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGKAPI 193 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + + + +FF LS + +K+ S+ S E +P ++ + +V GLK S++R WG Sbjct: 194 -FKKSKHWFFDLSEFNEKIRSWISSSNE--MPDNVKSVALGWVSEGLKPRSITRDN-KWG 249 Query: 218 IKIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPAD----LHVIGKD 266 I P +D +YVW +AL Y++ G K +W ++ + IGKD Sbjct: 250 IPAPFIGAEDKS--IYVWFEALLGYISAVIEYFEKKGEVEKWKEYWFSNDIKSYYFIGKD 307 Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGV 322 + FH + PA L+++ LP + + ++L++G+K SKS +G ID E E + V Sbjct: 308 NIPFHVVILPAMLMASGEEYHLPDVIAATEYLLYEGQKFSKSRKIGVWID--EAPELMDV 365 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--P 380 + R+ L+R KD + + VN +L + IGN V+R +SM+ + Y+G++P Sbjct: 366 EYWRFVLIRLRPEEKDTNFTWRETVRIVNTELNDDIGNYVNRILSMLNRYYNGIVPEFRS 425 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 A ++D+ I+S+ + + + + + + + +++ V E + Y + + PW+L K Sbjct: 426 DALDDNDKKIISLINEIPKIVGDLFEKGKLKAGTEEMLRFVRECNAYLNLKAPWDLYKAG 485 Query: 441 PD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 + + LY+ V ++ +AILL +P A +I+D+L + + Sbjct: 486 KEVELNNTLYIGVNSVKTIAILLYPLMPSHAQEIYDMLNMGN 527 >gi|256370611|ref|YP_003108436.1| methionyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM] gi|256009403|gb|ACU52763.1| methionyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM] Length = 553 Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 129/532 (24%), Positives = 243/532 (45%), Gaps = 52/532 (9%) Query: 9 ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 ++ A+ Y N HIGH + + AD+ R+ + +G +V+F +GTDEHG I A+ G+ Sbjct: 8 VTAALPYANGPIHIGHLSGVYLPADIFVRYLKSNGKNVIFISGTDEHGVPITIKAKEEGL 67 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + V++ ++ + I +D+F RTT K H T +K +S K +++ + Sbjct: 68 SPQELVNKYHSLIKNSLKKMGILFDNFSRTTSKIHFKTSIKFFKILSKKKILFEKESEHY 127 Query: 128 YSLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 + + + + D + YK A G + +P + + +F K Sbjct: 128 FDKKVKKFLPDRYIRGICPKCSYKAAYGDQCEKCGGSISPEELINPYSFFTGKKPILKKT 187 Query: 177 LSYYESHPEFILPIER------------------RNEVISFVKSGLKDLSLSRKTFDWGI 218 +Y LP+ + ++ +++K GLK +++R +WGI Sbjct: 188 KHWY-------LPLNKYQNFLEKWIKTKKFKKNVSGQIKAWLKEGLKPRAITR-DLNWGI 239 Query: 219 KIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW----PADLHVIGKDILRFH 271 +P ++ ++YVW +A Y+++T G K+W A ++ IGKD + FH Sbjct: 240 PLPIKNNTGKVLYVWFEAPIGYISSTIEWGLKTGKNWEKYWKNKNTAIINFIGKDNIVFH 299 Query: 272 AIYWPAFL-LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYF 328 I +P L + LP V ++ F+ + +KIS S + E +E+ D LRY Sbjct: 300 GIIFPIMLKVHGEYILPYNVPANEFLNIEKKKISTSKKWAVWLHEYLEDFPKKEDVLRYV 359 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L + KD + KK+ N++L + +GN +R V + K ++G +P+P F D Sbjct: 360 LTSNMPETKDTNFSWQNFKKKNNSELVSILGNYFNRVVVLTKKLFNGKVPSPEKFKTKDF 419 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 IL + +I ++ AL + L ++Y ++PW K N R T++ Sbjct: 420 FILKFLKKCPLKIGGFIEKYHFKDALMTFMELARLGNKYLTDEEPW---KINKKRVKTII 476 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN-RCFQSLDQRLKPGFML 499 Y++ +++ + L F+P ++KI +L + N + ++ + PG +L Sbjct: 477 YISFQIMGVIGNLSNPFLPFTSSKILKMLSLKQLNWQLLLKTNEIVTPGLLL 528 >gi|239999868|ref|ZP_04719792.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|240015623|ref|ZP_04722163.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae FA6140] Length = 684 Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 130/512 (25%), Positives = 222/512 (43%), Gaps = 56/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPE 181 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 239 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262 +SR +G +IPD P YVW+DA Y+ + L + G +++ AD H Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 299 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359 Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 360 PEWMRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV 419 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439 S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 420 -----SGSALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 474 Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 475 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506 >gi|21672394|ref|NP_660461.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|22654289|sp|Q9ZHD7|SYM_BUCAP RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|21623001|gb|AAM67672.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 545 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 125/503 (24%), Positives = 230/503 (45%), Gaps = 44/503 (8%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N HIGH E I AD+ R+ R+ +V F + D HG I ++ Sbjct: 6 KKILVTCALPYANGPIHIGHMLEHIQADIWVRYQRMRNNEVWFISSDDAHGTAIMLKSEK 65 Query: 65 AGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K+ + D ++ +IS+D++ T + R ++ +S++ I + Sbjct: 66 LGITPIKLIKKIKEEHIIDFSN-FNISHDNYHSTHCVENLFLLRKIFLSLSEQKLINEKK 124 Query: 124 YSGWYSLRDEAYYNDDEVYKGAD----------------GQYYNAQH--NPVQWMEEE-- 163 +Y + + D KG G Y NP+ + Sbjct: 125 IFQFYD-NTKKMFLPDRFIKGTCPFCSSKNQNGDNCEICGSIYEPTDLVNPISVISNSVP 183 Query: 164 ------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 +F L + + L + S IL + ++KSGLK+ +SR +G Sbjct: 184 ILKNTTHLYFNLPLFTNMLNKWIHSG---ILEKSVAKKTEEWLKSGLKEWGISRDAPYFG 240 Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILRF 270 KIP + YVW+DA Y++ N +FW + H IGKDI+ F Sbjct: 241 FKIPKFDKKYFYVWLDAPVGYISAFKNFCTKNKKVDFNEFWKKESKCELYHFIGKDIIYF 300 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 H ++WPA L +++ P +F HG + G K+SKS G +I + I+ D+LRY+ Sbjct: 301 HTLFWPAILEASSYRKPNGIFVHGHLTINGLKLSKSRGFLIKASDWIKCFDSDSLRYYYA 360 Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 +++ D + + +++N+D+ N + NL SR+ S I K +DG + A + D + Sbjct: 361 SKLSNNINDIEINLEDFIQKINSDIVNKLVNLASRNASFIHKYFDGYL----ADSLGDCN 416 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 + + ++I +N+ + + + L+ ++Y + ++PW++K+ N ++ T+ Sbjct: 417 LYQDFIDISKKIANFFENRQFSSVIRECMKLLDLANQYINQREPWKIKQDNFNKLHTICT 476 Query: 450 VTVEVIRQLAILLQAFVPKLANK 472 V + + R + I L+ +P LA K Sbjct: 477 VGINLFRLVVIFLKPIIPDLAKK 499 >gi|229529874|ref|ZP_04419264.1| methionyl-tRNA synthetase [Vibrio cholerae 12129(1)] gi|229333648|gb|EEN99134.1| methionyl-tRNA synthetase [Vibrio cholerae 12129(1)] Length = 658 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 131/485 (27%), Positives = 212/485 (43%), Gaps = 50/485 (10%) Query: 27 EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF-RDMAD 85 E I AD+ R+ RL G V F D HG I AQ G+T + ++ S RD A Sbjct: 3 EHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMGMTPEAMIEMVSEEHQRDFAG 62 Query: 86 VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG- 144 DIS+D++ T + + ++ ++ G I S + E + D V KG Sbjct: 63 -FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQLFDPEKEMFLPDRFV-KGT 120 Query: 145 ---------------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSY 179 A G+ Y+ NP + + E +FF L ++ L + Sbjct: 121 CPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEW 180 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 S L E N++ + + GL+ +SR +G +IP + YVW+DA Y+ Sbjct: 181 TRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYM 237 Query: 240 TTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 + L + G ++W D H IGKDI+ FH+++WPA L + P VF Sbjct: 238 GSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFHSLFWPAMLDGSGFRKPTNVFV 297 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVN 351 HG++ G K+SKS G + + + + LRY+ ++ D + + +RVN Sbjct: 298 HGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVN 357 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ--EIRENMQNQL 409 AD+ N I NL SR+ I K +DG + A E R+ + E RE Sbjct: 358 ADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEFAGAADRIAELFEARE------ 411 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVLYVTVEVIRQLAILLQAFVP 467 RA+ ++ +L + ++Y D + PW + K+ D+A + V + + R L L+ +P Sbjct: 412 FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGINLFRVLMTYLKPVMP 471 Query: 468 KLANK 472 LA + Sbjct: 472 ALAER 476 >gi|238020730|ref|ZP_04601156.1| hypothetical protein GCWU000324_00620 [Kingella oralis ATCC 51147] gi|237867710|gb|EEP68716.1| hypothetical protein GCWU000324_00620 [Kingella oralis ATCC 51147] Length = 688 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 138/539 (25%), Positives = 231/539 (42%), Gaps = 51/539 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M + K+ +++A+ Y N H+GH E I D+ RF + G + + D HG I Sbjct: 1 MTSKRKILVTSALPYANGAIHLGHMVEHIQTDIWVRFQKSRGHECYYCCADDTHGTPIML 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 AA+ G+T + + + I YD++ T + +++ + G I Sbjct: 61 AAEKQGITPEQLIAKTHGEHLADFTGFGIGYDNYYSTHSPENQTLSEQIYRSLKANGKII 120 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY-------------------YNAQHN 155 + + + + D V KG A QY Y+A Sbjct: 121 SKTINQLFDPEKQMFLPDRFV-KGECPKCHAQDQYGDNCEVCGTTYAPTELIKPYSAVSG 179 Query: 156 PVQWMEE-EGYFFRLSAYQDKLLSYY--ESHPEFILPIERRNEVISFVKSG-LKDLSLSR 211 M+E E +FF+LS D L + E++ L E N++ ++K G L D +SR Sbjct: 180 ATPVMKETEHFFFKLSDCGDYLKQWTAGETNGRAHLQPEALNKMNEWLKEGELSDWDISR 239 Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGK 265 +G +IPD P YVW+DA Y+ + L G +F+ D H IGK Sbjct: 240 DAPYFGFQIPDAPNKYFYVWLDAPVGYMASFQNLCARKGLDFNEFFGKDSQTELYHFIGK 299 Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324 DIL FHA++W A L + P +F+HGF+ G+K+SKS G I +E+ + + Sbjct: 300 DILYFHALFWTAMLEYSGHRAPSGIFAHGFLTVDGQKMSKSRGTFITARSYLEQGLNPEW 359 Query: 325 LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 +RY++ ++ +D + RVN+DL N+ +R+ I K + G + Sbjct: 360 MRYYIAAKLNSKIEDIDLNLQDFIARVNSDLVGKYVNIAARAAGFIHKRFSGCLKDV--- 416 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-- 441 S I+ + + I + + +AL +++ L V+ Y D KPWEL K Sbjct: 417 --SGSEIVKHLAAESERIASLYEEREYGKALREIMILADVVNEYVDENKPWELAKLEGAD 474 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADENRCFQSLDQRLKP 495 R V + + L + L +P++A + + L + AD +R S + +KP Sbjct: 475 SRLHKVCSELINAFKILTVYLSPVLPRVAEQAAEFLGLEKLVWADASRTL-SENHVIKP 532 >gi|156937943|ref|YP_001435739.1| methionyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I] gi|187647728|sp|A8ABN0|SYM_IGNH4 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|156566927|gb|ABU82332.1| methionyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I] Length = 561 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 133/513 (25%), Positives = 234/513 (45%), Gaps = 53/513 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K + +A Y N PH+G+ ++ ADV ARF RL G DV+F +G+DEHG I A+ Sbjct: 3 KWIVGSAWPYVNTVPHLGNLIGSVLSADVFARFLRLMGEDVVFVSGSDEHGTPIEVEARK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV K D+ + + + IS+D++ RT H + R + KI + G I+ Sbjct: 63 RGVEPKELTDKVHEYVKKLFEKYLISFDNYTRTHNPVHMEFVRETFMKIYENGYIFTQEM 122 Query: 125 SGWYSLRDEAYYNDDEV-----YKGA---------------------DGQYYNAQHNPVQ 158 Y +D+ + D Y GA + + PV Sbjct: 123 VMPYCPKDKMFLPDRFTVGTCPYCGAPDARGDQCERCGKLLDPPDLVNPRCAFCGSRPV- 181 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 W + +FF L + L+ + E LP + +++VK GL S++R WGI Sbjct: 182 WRKTLHWFFDLPKAAEGLVEWLERSE---LPNNVKKFTLNWVKEGLTPRSVTRDN-KWGI 237 Query: 219 K--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFW----PADLHVIGKDILRF 270 P +YVW +A+ YL+ LD +G+ +FW ++ IGKD + F Sbjct: 238 PAPFPGAEGKTIYVWFEAVLGYLSAVKELDVKNGTNLFEEFWKDINSRPVYFIGKDNIPF 297 Query: 271 HAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEV-GVDAL 325 H+I PA L + PLP + + +++++G+K SK +G ID E +E V D Sbjct: 298 HSIILPALLKATGEEYPLPYNISATEYLMYEGQKFSKRRRVGVWID--EALEVVPNPDYW 355 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 R+ L+R +D + + VN++L + IGN R ++ + + + G + Sbjct: 356 RFALIRMRPEERDTNFTWREFYRIVNSELNDDIGNFAHRVLTFVERRFGGSV-----RGR 410 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA 444 DE + + + ++ + M + A V+ + ++Y + ++PW L K+ + A Sbjct: 411 VDEEVKKSIAELHEKYVKAMYKVKLKEASGLVLEMARLGNKYLNEKEPWRLLKEGKEEEA 470 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V+Y + ++R++A+ L F P A +++ ++ Sbjct: 471 RDVMYTCLFILREVALHLAPFAPSAAEELWKMI 503 >gi|121633907|ref|YP_974152.1| methionyl-tRNA synthetase [Neisseria meningitidis FAM18] gi|187647737|sp|A1KR57|SYM_NEIMF RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|120865613|emb|CAM09333.1| methionyl-tRNA synthetase [Neisseria meningitidis FAM18] Length = 685 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 128/511 (25%), Positives = 218/511 (42%), Gaps = 52/511 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECYYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ + + + +I YD++ T + + +++ + I Sbjct: 64 GIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQFSQDIYRALKANDKIESRVIE 123 Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM-------------- 160 + + + D V G + + ++P + + Sbjct: 124 QLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPELR 183 Query: 161 EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSLS 210 E E +FF+L D L ++ ++ P L E N++ ++ G L D +S Sbjct: 184 ESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWDIS 241 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIG 264 R +G +IPD P YVW+DA Y+ + L + G KA H IG Sbjct: 242 RDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHFIG 301 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 KDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + + Sbjct: 302 KDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPE 361 Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 362 WMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGKLKDV-- 419 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440 SD ++L+ + + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 420 ---SDSALLAKLTAQSEAIAECYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQ 476 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 +R V + L L +P+ A Sbjct: 477 DERLHEVCSELINAFTMLTAYLAPVLPQTAT 507 >gi|313127143|ref|YP_004037413.1| methionyl-tRNA synthetase [Halogeometricum borinquense DSM 11551] gi|312293508|gb|ADQ67968.1| methionyl-tRNA synthetase [Halogeometricum borinquense DSM 11551] Length = 688 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 121/510 (23%), Positives = 227/510 (44%), Gaps = 58/510 (11%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N HIGH + D+ +R + G + F +G+D HG +A A+ GVT Sbjct: 14 VTCGLPYANGDLHIGHLRTYVGGDIYSRALKRLGQETAFVSGSDMHGTPVAVNAEKEGVT 73 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + F ++ +++ +I +D++ T ++ + + + L + + D+G +YK Y Sbjct: 74 PESFALRHHEKYKETFPKFEIEFDNYGHTHDETNTELTQELVRTLEDEGYVYKKQIPVAY 133 Query: 129 SLRDEAYYND----------------DEVYKGADGQYYNAQH----------NPVQWMEE 162 + + D DE +G G++ NP ++ + Sbjct: 134 DPDADQWLPDRYVEGTCPYCGEHARGDECDEGC-GRHLEPGEIEDPVSAITGNPAEYRDR 192 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIE----RRNEVISFVKSGLKDLSLSRKTFDWGI 218 FFR++ Q+ L EFI +E +N+ +++ L+D ++R DWGI Sbjct: 193 NHRFFRVTELQEYL-------QEFIDRLEGTSNAQNQPREWIEGELQDWCITRD-MDWGI 244 Query: 219 KIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPAD---LHVIGKDILR 269 P + + ++YVW+DA Y+++T G+ K W +H+IG+DI++ Sbjct: 245 DYPGETEDDLVLYVWVDAPIEYISSTKQYTERAGADTFDWEKAWKESGDIVHIIGRDIIQ 304 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LRY 327 H ++WPA L + + P+ V + GFI G+ S S + E ++E G D +RY Sbjct: 305 HHTVFWPAMLRATDHVEPRAVMASGFITLNGKGFSTSRNRAVWADEYLDE-GFDPALIRY 363 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 +L +D + + + RVN +L +GN + RS+ ++Y+G P E Sbjct: 364 YLATNGGFQQDVDFSWEKFRNRVNNELVGTVGNFLYRSLLFAHREYEGT-PDADLSAEVK 422 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 E I ++E + + + V+ L + Y +PW+L R V Sbjct: 423 ERIYD----AIEEFEAGVNDYSVREVGNSVVRLAQFGNEYIQGHEPWKLDDGAEKR--QV 476 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + V++ + +A+L + P A K++D L Sbjct: 477 IRDCVQIAKAIAVLFEPVAPGKAEKLWDDL 506 >gi|229505369|ref|ZP_04394879.1| methionyl-tRNA synthetase [Vibrio cholerae BX 330286] gi|229510961|ref|ZP_04400440.1| methionyl-tRNA synthetase [Vibrio cholerae B33] gi|229518082|ref|ZP_04407526.1| methionyl-tRNA synthetase [Vibrio cholerae RC9] gi|229608388|ref|YP_002879036.1| methionyl-tRNA synthetase [Vibrio cholerae MJ-1236] gi|229344797|gb|EEO09771.1| methionyl-tRNA synthetase [Vibrio cholerae RC9] gi|229350926|gb|EEO15867.1| methionyl-tRNA synthetase [Vibrio cholerae B33] gi|229357592|gb|EEO22509.1| methionyl-tRNA synthetase [Vibrio cholerae BX 330286] gi|229371043|gb|ACQ61466.1| methionyl-tRNA synthetase [Vibrio cholerae MJ-1236] Length = 658 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 131/485 (27%), Positives = 212/485 (43%), Gaps = 50/485 (10%) Query: 27 EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF-RDMAD 85 E I AD+ R+ RL G V F D HG I AQ G+T + ++ S RD A Sbjct: 3 EHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMGMTPEAMIEMVSEEHQRDFAG 62 Query: 86 VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG- 144 DIS+D++ T + + ++ ++ G I S + E + D V KG Sbjct: 63 -FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQLFDPEKEMFLPDRFV-KGT 120 Query: 145 ---------------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSY 179 A G+ Y+ NP + + E +FF L ++ L + Sbjct: 121 CPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEW 180 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 S L E N++ + + GL+ +SR +G +IP + YVW+DA Y+ Sbjct: 181 TRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYM 237 Query: 240 TTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 + L + G ++W D H IGKDI+ FH+++WPA L + P VF Sbjct: 238 GSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFHSLFWPAMLDGSGFRKPTNVFV 297 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVN 351 HG++ G K+SKS G + + + + LRY+ ++ D + + +RVN Sbjct: 298 HGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVN 357 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ--EIRENMQNQL 409 AD+ N I NL SR+ I K +DG + A E R+ + E RE Sbjct: 358 ADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEFAGAADRIAELFEARE------ 411 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVLYVTVEVIRQLAILLQAFVP 467 RA+ ++ +L + ++Y D + PW + K+ D+A + V + + R L L+ +P Sbjct: 412 FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGINLFRVLMTYLKPVMP 471 Query: 468 KLANK 472 LA + Sbjct: 472 ALAER 476 >gi|323474905|gb|ADX85511.1| methionyl-tRNA synthetase [Sulfolobus islandicus REY15A] gi|323477646|gb|ADX82884.1| methionyl-tRNA synthetase [Sulfolobus islandicus HVE10/4] Length = 573 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 138/522 (26%), Positives = 251/522 (48%), Gaps = 54/522 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAA 62 K+ +++A Y N+ PH+G+ I+ ADV AR+ RL +VLF +G+DEHG I A Sbjct: 2 KVLVTSAWPYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSGSDEHGTPIEIEA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI-- 119 V K DQ + + +V IS+D++ RT + H R K++ + Sbjct: 62 IKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESETHKKFVREFLLKLTKYVKVSE 121 Query: 120 -----------------YKGC--YSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHNPV 157 KG Y G+ R + N ++ + + + P+ Sbjct: 122 DEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGKAPI 181 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + + + +FF LS + +K+ S+ S E +P ++ + +V GLK S++R WG Sbjct: 182 -FKKSKHWFFDLSEFNEKIRSWISSSNE--MPDNVKSVALGWVSEGLKPRSITRDN-KWG 237 Query: 218 IKIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPAD----LHVIGKD 266 I P +D +YVW +AL Y++ G K +W ++ + IGKD Sbjct: 238 IPAPFIGAEDKS--IYVWFEALLGYISAVIEYFEKKGEVEKWKEYWFSNDIKSYYFIGKD 295 Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGV 322 + FH + PA L+++ LP + + ++L++G+K SKS +G ID E E + V Sbjct: 296 NIPFHVVILPAMLMASGEEYHLPDVIAATEYLLYEGQKFSKSRKIGVWID--EAPELMDV 353 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--P 380 + R+ L+R KD + + VN +L + IGN V+R +SM+ + Y+G++P Sbjct: 354 EYWRFVLIRLRPEEKDTNFTWRETVRIVNTELNDDIGNYVNRILSMLNRYYNGIVPEFRS 413 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 A ++D+ I+S+ + + + + + + + +++ V E + Y + + PW+L K Sbjct: 414 DALDDNDKKIISLINEIPKIVGDLFEKGKLKAGTEEMLRFVRECNAYLNLKAPWDLYKAG 473 Query: 441 PD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 + + LY+ V ++ +AILL +P A +I+D+L + + Sbjct: 474 KEVELNNTLYIGVNSVKTIAILLYPLMPSHAQEIYDMLNMGN 515 >gi|16082174|ref|NP_394618.1| methionyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728] gi|25009396|sp|Q9HJ12|SYM_THEAC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|10640473|emb|CAC12287.1| probable methionyl-tRNA synthetase [Thermoplasma acidophilum] Length = 547 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 137/515 (26%), Positives = 241/515 (46%), Gaps = 57/515 (11%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K+ ++ A+ Y N HIGH A + ADV R++RL G VL+ +G+DE+G I A+ Sbjct: 5 KILVNCALPYANGPLHIGHIAGAYLGADVFVRYNRLMGNQVLYVSGSDEYGTPITVRAEK 64 Query: 65 AGVTTK----VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 G + K ++ +++ R F + L IS+D F+RTT H + + + K+ ++G I Sbjct: 65 EGRSPKEIADIYYEEHLRTFEN----LGISFDIFMRTTWPEHSENAQDFFIKLLNEGYIE 120 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWME-------- 161 KG + + + D + Y A G Q N +P ++ Sbjct: 121 KGTMIAPFCRKIGRFMPDRYIEGTCPYCHYPKARGDQCDNCGRTLDPQDLIDPKCILSGE 180 Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212 E +FF + L + S F P V+++ + GLK ++R Sbjct: 181 TPEFRETEHFFLRLDLLEDRLKSWISSKNFWKP-----NVLAYTQNFISGGLKKRPITRD 235 Query: 213 TFDWGIKIPDDP--QYIMYVWIDALTNYLTT----TGYLDNPDGSKAKFWPADL---HVI 263 DWG+KIP D +YVW +AL Y+T + NPD K + ++ + I Sbjct: 236 -IDWGVKIPLDGYDSKRIYVWFEALIGYITGAKEYSKRTGNPDLWKEYYMDPEVRNYYFI 294 Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 GKD + FHAI WPA L+ LP + ++ ++ KG++ SKS G ++++ V Sbjct: 295 GKDNIPFHAIIWPAMLMGYGGFNLPYDIPANEYLTFKGQQFSKSRGIGYSVDDLLKAVPA 354 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D LRY++ + D + + L VN+DL + GNLV R +S + D + P P Sbjct: 355 DYLRYYVASILPETGDSDFSLEELVNTVNSDLIDKYGNLVYRILSFM--DRYSINPDPVD 412 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 + +E R + E++ + R L + + L + +F+ +PW+ K + Sbjct: 413 VSGDEE--FKYAQRSFELWSEDLSGVHVKRGLLRWLDLAIYANGFFNRSEPWKTIKNDRQ 470 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + LY+++++ L +++ ++P A KI+++L Sbjct: 471 KLNHDLYLSLKITEVLTVMVYPYIPSSAEKIWNML 505 >gi|229515418|ref|ZP_04404877.1| methionyl-tRNA synthetase [Vibrio cholerae TMA 21] gi|229347187|gb|EEO12147.1| methionyl-tRNA synthetase [Vibrio cholerae TMA 21] Length = 658 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 131/485 (27%), Positives = 212/485 (43%), Gaps = 50/485 (10%) Query: 27 EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF-RDMAD 85 E I AD+ R+ RL G V F D HG I AQ G+T + ++ S RD A Sbjct: 3 EHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMGMTPEAMIEMVSEEHQRDFAG 62 Query: 86 VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG- 144 DIS+D++ T + + ++ ++ G I S + E + D V KG Sbjct: 63 -FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQLFDPEKEMFLPDRFV-KGT 120 Query: 145 ---------------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSY 179 A G+ Y+ NP + + E +FF L ++ L + Sbjct: 121 CPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEW 180 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 S L E N++ + + GL+ +SR +G +IP + YVW+DA Y+ Sbjct: 181 TRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYM 237 Query: 240 TTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 + L + G ++W D H IGKDI+ FH+++WPA L + P VF Sbjct: 238 GSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFHSLFWPAMLDGSGFRKPTNVFV 297 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVN 351 HG++ G K+SKS G + + + + LRY+ ++ D + + +RVN Sbjct: 298 HGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVN 357 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ--EIRENMQNQL 409 AD+ N I NL SR+ I K +DG + A E R+ + E RE Sbjct: 358 ADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEFAGAADRIAELFEARE------ 411 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVLYVTVEVIRQLAILLQAFVP 467 RA+ ++ +L + ++Y D + PW + K+ D+A + V + + R L L+ +P Sbjct: 412 FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGINLFRVLMTYLKPVMP 471 Query: 468 KLANK 472 LA + Sbjct: 472 ALAER 476 >gi|218767290|ref|YP_002341802.1| methionyl-tRNA synthetase [Neisseria meningitidis Z2491] gi|25009400|sp|Q9JWP0|SYM_NEIMA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|121051298|emb|CAM07582.1| methionyl-tRNA synthetase [Neisseria meningitidis Z2491] Length = 685 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 129/508 (25%), Positives = 222/508 (43%), Gaps = 53/508 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + D I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 + + + D V G + + ++P + + Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182 Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209 E E +FF+L D L ++ ++ P L E N++ ++ G L D + Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263 SR +G +IPD P YVW+DA Y+ + L + G +++ AD H I Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFI 300 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 GKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360 Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 +D +L+ + + I E +++ RAL +++L V+ Y DA KPWEL K Sbjct: 420 ----ADSELLAKLTAQSEAIAECYESREYARALRDIMALADIVNEYVDANKPWELAKQEG 475 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKL 469 A + V E+I +L P L Sbjct: 476 QDAR-LHEVCSELINAFTMLTAYLAPVL 502 >gi|156975200|ref|YP_001446107.1| methionyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116] gi|156526794|gb|ABU71880.1| hypothetical protein VIBHAR_02927 [Vibrio harveyi ATCC BAA-1116] Length = 661 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 127/484 (26%), Positives = 212/484 (43%), Gaps = 48/484 (9%) Query: 27 EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADV 86 E I AD+ R+ RL G V F D HG I AQ G+T + + S + Sbjct: 3 EHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMGITPEEMIAAVSEEHQKDFAG 62 Query: 87 LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG-- 144 DIS+D++ T + + + ++ ++ G I S + E + D V KG Sbjct: 63 FDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQLFDPEKEMFLPDRFV-KGTC 121 Query: 145 ----ADGQYYNAQHN------PVQWME--------------EEGYFFRLSAYQDKLLSYY 180 ++ QY + N P + ++ E +FF L ++ L + Sbjct: 122 PKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVMKDSEHFFFDLPQFESMLKEWT 181 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 S L E N++ + +SGL+ +SR +G +IP + YVW+DA Y+ Sbjct: 182 RSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEENKFFYVWLDAPVGYMA 238 Query: 241 TTGYL-DNPDGSK-AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 + L D +G ++W D H IGKDI+ FH+++WPA L + P VF H Sbjct: 239 SFKNLCDKTEGLDFDEYWKKDSSTELYHFIGKDIVYFHSLFWPAMLEGSGFRKPNNVFVH 298 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNA 352 G++ G K+SKS G + ++ + + LRY+ ++ D + + +RVNA Sbjct: 299 GYVTVNGAKMSKSKGTFVKASTYLKHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVNA 358 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV--LQEIRENMQNQLI 410 D+ N I NL SR+ I K ++G + A E ++ R+ L E RE Sbjct: 359 DVVNKIVNLASRNAGFISKRFEGKLAENFAEPELYNEFVAAADRIAELYETRE------F 412 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPK 468 RA+ ++ +L + ++Y D + PW + K + V + + R L L+ +P Sbjct: 413 GRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEICSVGINLFRVLMTYLKPVMPA 472 Query: 469 LANK 472 LA + Sbjct: 473 LAAR 476 >gi|313205891|ref|YP_004045068.1| methionyl-tRNA synthetase [Riemerella anatipestifer DSM 15868] gi|312445207|gb|ADQ81562.1| methionyl-tRNA synthetase [Riemerella anatipestifer DSM 15868] gi|315022203|gb|EFT35231.1| methionyl-tRNA synthetase [Riemerella anatipestifer RA-YM] gi|325336669|gb|ADZ12943.1| EMAP domain [Riemerella anatipestifer RA-GD] Length = 677 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 126/510 (24%), Positives = 236/510 (46%), Gaps = 43/510 (8%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E+ I+ A+ Y N HIGH A I ADV ARF R G +V F G+DEHG I A+ Sbjct: 3 ERKLITAALPYANGPVHIGHLAGVYIPADVYARFQRRTGKEVAFICGSDEHGIPITIRAK 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT + VD+ + + L IS+D++ RTT +H++T + K+ + G + Sbjct: 63 KEGVTPQDIVDKYHLIIKKSFEDLGISFDEYSRTTSAKHYETASEFFLKMYENGKFTEEV 122 Query: 124 YSGWYSLRDEAYYNDDEVY----KGADGQYYNAQH-------------NPVQWME----- 161 +Y + + D + K ++ Y Q NP + Sbjct: 123 SEQFYDEQAGEFLADRYIVGTCPKCSNNNAYGDQCEKCGSTLSPTELLNPKSMLSGNSPV 182 Query: 162 ---EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + ++ L+ Y+ L + E H P +V S++ GLK +++R +WG Sbjct: 183 LKPTKNWYLPLNEYEGFLNQWIIEGHQHDWKP-NVYGQVKSWLNEGLKPRAMTRD-LNWG 240 Query: 218 IKIP--DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD----LHVIGKDILRF 270 + +P D ++YVW DA Y++ T + + + +W ++ +H IGKD + F Sbjct: 241 VPVPLPDAEGKVLYVWFDAPIGYISFTKEWAEKNNKDWKDYWQSENSDLVHFIGKDNIVF 300 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327 H I +P+ + + + +P V + F+ + +KIS S + E + + D LRY Sbjct: 301 HCIIFPSMMKAHGDYIMPNNVPAFEFLNLENDKISTSRNWAVWAHEYVADFPGQQDVLRY 360 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L+ KD + + + N++L +GN ++R + K Y+G +P ++ Sbjct: 361 ALLSSAPETKDNNFTWKEFQTKNNSELVGILGNFINRVAVLTHKYYNGRVPK----GNTN 416 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 + L ++ EI++ ++ AL+ +++L ++Y ++PW+ KT+ + + Sbjct: 417 ATELEEINKAATEIKDYLEKFEFRNALSALMNLARFGNQYLQTEEPWKTIKTDEAKTANT 476 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L++ ++ LA L + F+P + K+ ++ Sbjct: 477 LFIGTQIAIALAQLSEPFMPFSSEKLLNMF 506 >gi|15897480|ref|NP_342085.1| methionyl-tRNA synthetase [Sulfolobus solfataricus P2] gi|284174797|ref|ZP_06388766.1| methionyl-tRNA synthetase [Sulfolobus solfataricus 98/2] gi|25009409|sp|Q9UWW2|SYM_SULSO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|6015914|emb|CAB57741.1| methionyl-trna synthetase [Sulfolobus solfataricus P2] gi|13813723|gb|AAK40875.1| Methionyl-tRNA synthetase (metS) [Sulfolobus solfataricus P2] gi|261602240|gb|ACX91843.1| methionyl-tRNA synthetase [Sulfolobus solfataricus 98/2] Length = 573 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 141/520 (27%), Positives = 246/520 (47%), Gaps = 50/520 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAA 62 K+ ++ A Y N+ PH+G+ I+ ADV AR+ RL +VLF +G+DEHG I A Sbjct: 2 KVLVTAAWPYVNSVPHLGNLIGSILSADVFARYARLRYGKENVLFVSGSDEHGTPIEIEA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRTTEKRHHDTCRILWKKIS------- 114 V K DQ R + +V IS+D++ RT + H R K++ Sbjct: 62 IKRKVNPKELTDQAHEYDRHLFLNVWKISFDNYTRTESEIHKKFVREFLLKLTKYIKVSE 121 Query: 115 ------DKGDIY------KGC--YSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHNPV 157 + +Y KG Y G+ R + N ++ + + + PV Sbjct: 122 DEIPYCENDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGKTPV 181 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + + + +FF LS + DK+ + S E +P ++ +S+V GLK S++R WG Sbjct: 182 -FKKTKHWFFDLSEFNDKIRGWISSSNE--MPDNVKSVALSWVGEGLKPRSITRDN-KWG 237 Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-----FWP--ADLHVIGKDIL 268 I P + +YVW +AL Y++ G + K F P + IGKD + Sbjct: 238 IPAPFEGAQDKSIYVWFEALLGYISAVIEYFERKGDQEKWKEYWFGPNIKSYYFIGKDNI 297 Query: 269 RFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDA 324 FHA+ PA L+++ LP + + ++L++G+K SKS +G ID E E + V+ Sbjct: 298 PFHAVILPAMLMASEEEYHLPDVIAATEYLLYEGQKFSKSRKIGVWID--EAPELMDVEY 355 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGA 382 R+ L+R KD + + VN +L + IGN V+R +SM+ + Y G++P Sbjct: 356 WRFVLIRLRPEEKDTNFTWRETVRIVNTELNDDIGNYVNRVLSMVNRYYSGIVPEFKIDI 415 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 ++D I+S+ + + + + + + +++ V E + Y + + PW+L K+ + Sbjct: 416 LDDNDRKIISLINETPKVVGDLFEKGKLKAGTEEMLKFVRECNAYLNMKAPWDLYKSGKE 475 Query: 443 -RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 LY+ ++ +AILL +P A KI+++L + + Sbjct: 476 IELKNTLYIGTNSVKTIAILLYPLMPSHAQKIYEMLNMGN 515 >gi|319638779|ref|ZP_07993538.1| methionyl-tRNA synthetase [Neisseria mucosa C102] gi|317400020|gb|EFV80682.1| methionyl-tRNA synthetase [Neisseria mucosa C102] Length = 685 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 129/518 (24%), Positives = 223/518 (43%), Gaps = 54/518 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + D I YD++ T + +++ + G I Sbjct: 64 GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSEQIYRALKANGKIESRVI 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 + + + D V G + + ++P + + Sbjct: 123 KQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182 Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209 E E +FF+L D L ++ ++ P L E N++ ++ G L D + Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263 SR +G +IPD P YVW+DA Y+ + L + G +++ AD H I Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFI 300 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 GKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360 Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439 +D +L+ + + I E +++ +AL +++L V+ Y DA KPWEL K Sbjct: 420 ----ADSELLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEG 475 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +R V + L L +PK+A L Sbjct: 476 QDERLHEVCSELINAFTMLTAYLAPVLPKVAENAAKFL 513 >gi|325129190|gb|EGC52035.1| methionyl-tRNA synthetase [Neisseria meningitidis N1568] Length = 685 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 128/517 (24%), Positives = 222/517 (42%), Gaps = 52/517 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+ + + + +I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQFSQDIYRALKTGGKIESRVIE 123 Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM-------------- 160 + + + D V G + + ++P + + Sbjct: 124 QLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGVKPELR 183 Query: 161 EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSLS 210 E E +FF+L D L ++ ++ P L E N++ ++ G L D +S Sbjct: 184 ESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWDIS 241 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIG 264 R +G +IPD P YVW+DA Y+ + L + G +++ AD H IG Sbjct: 242 RDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFIG 301 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 KDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + + Sbjct: 302 KDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPE 361 Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 362 WMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV-- 419 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 +D ++L+ + I E +++ +AL +++L V+ Y DA KPWEL K Sbjct: 420 ---ADSALLAKLAAESDTIAEQYESREYAKALRDIMALADIVNEYVDANKPWELAKQEGQ 476 Query: 443 --RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 R V + L L +PK+A L Sbjct: 477 DARLHEVCSELINAFTMLTAYLAPVLPKVAENAAKFL 513 >gi|325133228|gb|EGC55897.1| methionyl-tRNA synthetase [Neisseria meningitidis M6190] gi|325139263|gb|EGC61807.1| methionyl-tRNA synthetase [Neisseria meningitidis ES14902] Length = 684 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 128/508 (25%), Positives = 223/508 (43%), Gaps = 53/508 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + D D I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVREEHLADFTD-FGIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 + + + D V G + + ++P + + Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182 Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209 E E +FF+L D L ++ ++ P L E N++ ++ G L D + Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263 SR +G +IPD P YVW+DA Y+ + L + G +++ AD H I Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFI 300 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 GKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360 Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++ + Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFESRLKDV- 419 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 +D ++L+ + + I E +++ +AL +++L V+ Y DA KPWEL K Sbjct: 420 ----ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEG 475 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKL 469 A + V E+I +L P L Sbjct: 476 QDAR-LHEVCSELINAFTMLTAYLAPVL 502 >gi|145591530|ref|YP_001153532.1| methionyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514] gi|187647757|sp|A4WKG3|SYM_PYRAR RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|145283298|gb|ABP50880.1| methionyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514] Length = 570 Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 130/514 (25%), Positives = 232/514 (45%), Gaps = 44/514 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K + +A Y PH+G+ ++ ADV AR+ RL G +V+F +G+D HG I A Sbjct: 3 KYVVGSAWPYVQTVPHLGNMIGSVLSADVYARYLRLRGHEVVFVSGSDMHGTPIEVEAIQ 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV + + + ++ DIS+D + T + H + + ++ + G I+ Sbjct: 63 LGVDPADYALKMHQIVAELFRRWDISFDLYTHTHSETHIKFVQEFFARVYENGFIFTRDD 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQ--------------W 159 Y RD+ Y D V Y+ A G Q N +P Q W Sbjct: 123 EVPYCPRDKIYLPDRFVIGKCPYCGYERARGDQCENCGRLLDPKQLIEPRCAVCGSKPEW 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 ++ L +D++ Y E +P LP+ + ++ +K G++ +++R WGI Sbjct: 183 RVTRHWYLDLRRLEDRIRKYVEGNPH--LPLNAKEMSLAMLKEGMRPRAITRDN-KWGIP 239 Query: 220 --IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFW----PADLHVIGKDILRF 270 P +YVW +A+ Y++ G + +FW + +GKD + F Sbjct: 240 APFPGAEGKTIYVWFEAVLGYISAVVEYFKKLGREEEWKRFWLDQETKVVFFVGKDNVPF 299 Query: 271 HAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDALR 326 H I PA L+++ N +P S ++L++G+K SKS G ID E + + D R Sbjct: 300 HVIILPALLMASGENYVMPTTTASTEYLLYEGDKFSKSRRWGIWID--EALHLLPTDYWR 357 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + LV +D + + +N L + +GN +R +S I G +P PG + Sbjct: 358 FVLVYIRPENRDTSFTWQTALEVINKVLNDDVGNYANRVLSFIKSRMGGAVPPPGKPSPE 417 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 DE +S +++ Q+ + + A+ V+ + E ++Y +A+ PWEL K + + A+ Sbjct: 418 DEEFISKVAQLFQKAEAHYDAIELKEAVHTVVEIAREGNKYLNARAPWELAKKDAEAANA 477 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 VLY ++ LA L VP+ A ++ ++ ++ Sbjct: 478 VLYRAFWSLKYLAAGLAPVVPRSAETLWAMMGIS 511 >gi|229585107|ref|YP_002843609.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.16.27] gi|228020157|gb|ACP55564.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.16.27] Length = 631 Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 138/518 (26%), Positives = 249/518 (48%), Gaps = 54/518 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAA 62 K+ +++A Y N+ PH+G+ I+ ADV AR+ RL +VLF +G+DEHG I A Sbjct: 60 KVLVTSAWPYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSGSDEHGTPIEIEA 119 Query: 63 QNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI-- 119 V K DQ + + +V IS+D++ RT + H R K++ + Sbjct: 120 IKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESEIHKKFVREFLLKLTKYVKVSE 179 Query: 120 -----------------YKGC--YSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHNPV 157 KG Y G+ R + N ++ + + + P+ Sbjct: 180 DEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGKAPI 239 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + + + +FF LS + +K+ S+ S E +P ++ + +V GLK S++R WG Sbjct: 240 -FKKSKHWFFDLSEFNEKIRSWISSSNE--MPDNVKSVALGWVSEGLKPRSITRDN-KWG 295 Query: 218 IKIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPAD----LHVIGKD 266 I P +D +YVW +AL Y++ G K +W ++ + IGKD Sbjct: 296 IPAPFIGAEDKS--IYVWFEALLGYISAVIEYFEKKGEVEKWKEYWFSNDIKSYYFIGKD 353 Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGV 322 + FH + PA L+++ LP + + ++L++G+K SKS +G ID E E + V Sbjct: 354 NIPFHVVILPAMLMASGEEYHLPDVIAATEYLLYEGQKFSKSRKIGVWID--EAPELMDV 411 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--P 380 + R+ L+R KD + + VN +L + IGN V+R +SM+ + Y+G++P Sbjct: 412 EYWRFVLIRLRPEEKDTNFTWRETVRIVNTELNDDIGNYVNRILSMLNRYYNGIVPEFRS 471 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 A ++D+ I+S+ + + + + + + + +++ V E + Y + + PW+L K Sbjct: 472 DALDDNDKKIISLINEIPKIVGDLFEKGKLKAGTEEMLRFVRECNAYLNLKAPWDLYKAG 531 Query: 441 PD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + LY+ V ++ +AILL +P A +I+D+L Sbjct: 532 KEVELNNTLYIGVNSVKTIAILLYPLMPSHAQEIYDML 569 >gi|325135247|gb|EGC57870.1| methionyl-tRNA synthetase [Neisseria meningitidis M13399] Length = 685 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 129/518 (24%), Positives = 222/518 (42%), Gaps = 54/518 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + D I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 + + + D V G + + ++P + + Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182 Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209 E E +FF+L D L ++ ++ P L E N++ ++ G L D + Sbjct: 183 RESEHFFFKLDECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWDI 240 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVI 263 SR +G +IPD P YVW+DA Y+ + L + G KA H I Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHFI 300 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 GKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360 Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439 +D ++L+ + + I E +++ +AL +++L V+ Y DA KPWEL K Sbjct: 420 ----ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEG 475 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +R V + L L +PK+A L Sbjct: 476 QDERLHEVCSELINAFTMLTAYLAPVLPKVAENAAKFL 513 >gi|293397921|ref|ZP_06642127.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae F62] gi|291611867|gb|EFF40936.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae F62] Length = 719 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 133/513 (25%), Positives = 225/513 (43%), Gaps = 58/513 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 39 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 98 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 99 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 156 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + + Sbjct: 157 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 216 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 217 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 274 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262 +SR +G +IPD P YVW+DA Y+ + L + G +++ AD H Sbjct: 275 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 334 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 335 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 394 Query: 322 VDALRYFLVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 + +RY++ ++ GK D + RVN+DL N+ +R+ I K ++G Sbjct: 395 PEWMRYYIAAKLN-GKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---R 450 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 P + S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 451 PKDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQ 508 Query: 440 --NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 509 EGQDERLHEVCSELINAFTMLTAYLAPVLPQTA 541 >gi|59802352|ref|YP_209064.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] gi|68565958|sp|Q5F585|SYM_NEIG1 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|59719247|gb|AAW90652.1| putative methionyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] Length = 684 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 133/513 (25%), Positives = 225/513 (43%), Gaps = 58/513 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + + Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 181 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 239 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262 +SR +G +IPD P YVW+DA Y+ + L + G +++ AD H Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 299 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359 Query: 322 VDALRYFLVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 + +RY++ ++ GK D + RVN+DL N+ +R+ I K ++G Sbjct: 360 PEWMRYYIAAKLN-GKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---R 415 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 P + S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 416 PKDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQ 473 Query: 440 --NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 474 EGQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506 >gi|240122554|ref|ZP_04735510.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID332] gi|268681142|ref|ZP_06148004.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID332] gi|268621426|gb|EEZ53826.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID332] Length = 684 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 133/513 (25%), Positives = 225/513 (43%), Gaps = 58/513 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + + Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 181 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 239 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262 +SR +G +IPD P YVW+DA Y+ + L + G +++ AD H Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 299 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359 Query: 322 VDALRYFLVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 + +RY++ ++ GK D + RVN+DL N+ +R+ I K ++G Sbjct: 360 PEWMRYYIAAKLN-GKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---R 415 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 P + S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 416 PKDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQ 473 Query: 440 --NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 474 EGQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506 >gi|114798101|ref|YP_760532.1| methionyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444] gi|123028005|sp|Q0C161|SYM_HYPNA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|114738275|gb|ABI76400.1| methionyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444] Length = 579 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 129/534 (24%), Positives = 231/534 (43%), Gaps = 56/534 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M ++ ++ I++A+ Y N H+G+ A M+ ADV AR RL G DV + TDEHG Sbjct: 1 MTQQRRILITSALPYINGVKHLGNLAGSMLPADVYARVMRLQGHDVTYICATDEHGTPAE 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AAQ G + + + D+ R + ++S+D F RT+ +H + L +++ G I Sbjct: 61 LAAQATGQSVQAYCDEQYEVQRKAGEGFNLSFDWFGRTSRPANHTLTQHLAQQLEKNGLI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP------ 156 Y++ D + D V Y+ A G Q N NP Sbjct: 121 EVRTSKQVYAVDDGRFLPDRYVEGTCPHCGYEKARGDQCDNCGRLLDPVDLINPYSAVSG 180 Query: 157 ---VQWMEEEGYFFRLSAYQDKLLSYYESH----PEFILPIERRNEVISFVKSGLKDLSL 209 ++ + + + + QD++ + + P + I + ++ GL S+ Sbjct: 181 SRNIEIRDTDHLYLLQTGMQDRIRDWVNAKGKNWPSLAVSIANK-----WLDEGLIARSI 235 Query: 210 SRKTFDWGIKIPD---DPQ-----YIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD- 259 SR WG+K+ D +P+ + YVW DA Y++ T G+ K W D Sbjct: 236 SRD-LSWGVKVTDADGNPRPGFENKVFYVWFDAPIGYISATQEWAEATGNDWEKLWLTDK 294 Query: 260 -------LHVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNV 310 + +GKD + FH + +P LL + P K+ + ++ G K S S Sbjct: 295 GADQTEYVQFMGKDNVAFHTVSFPVTLLGSGEPWKTVDKLKAFNWVTWYGGKFSTSQKRG 354 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 + + + + D R++L+ G D + +G + VN+DLAN +GN ++R Sbjct: 355 VFMDQALSLLPSDYWRWYLISNAPEGSDAAFTWEGFQAAVNSDLANVLGNFINRITKYCA 414 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 ++G IP G +++ + + + L + E + +A A+ ++ + + Y Sbjct: 415 SKFEGKIPETGTSGDAEAWMANELAERLPRLIEFYEAMEFRKAAAETRAIWAAGNEYLTK 474 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 +PW K + D A+ + + + I+ Q +P A KI D L + +ENR Sbjct: 475 AEPWVKYKNDVDGAAVGVRAGINLAAIFGIIAQPIIPDAAKKILDALGIPEENR 528 >gi|311896408|dbj|BAJ28816.1| putative methionyl-tRNA synthetase [Kitasatospora setae KM-6054] Length = 569 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 135/526 (25%), Positives = 232/526 (44%), Gaps = 45/526 (8%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N H+G+ M+ ADV AR+ R G +VL+ TDEHG AAQ AG+ Sbjct: 6 ITSALPYINGIKHLGNMVGSMLPADVYARYLRQRGHEVLYICATDEHGTPAELAAQEAGL 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 F + + + D +S+D F R++ ++ + + + +++ G I + Sbjct: 66 PVAEFCARAHDQQKAIYDGFRLSFDHFGRSSSPQNREITQEIARELQANGFIEERAIRQV 125 Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWME--------------E 162 YS+ D + D + Y A G Q N +P +E E Sbjct: 126 YSVADGRFLPDRYIVGTCPFCGYDKARGDQCENCTRVLDPTDLLEPRSAISGSAELEVRE 185 Query: 163 EGYFFRL-SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 + F L S D++ ++ +H + P+ + ++ GL+D +++R +WG+ +P Sbjct: 186 TKHLFLLQSKLTDEVEAWIAAHGD-DWPVLASSIARKWLTEGLQDRAITRD-LEWGVPVP 243 Query: 222 DD--PQY-----IMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV-----IGKDI 267 D P+ + YVW DA Y+ T + G + W AD V + KD Sbjct: 244 ADTWPELAAEGKVFYVWFDAPIEYIGATREWADATGGDWRSWWYEADDTVRYTEFMAKDN 303 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 + FH + +PA LL + P K + F + + G K S S I +E + D Sbjct: 304 VPFHTVMFPATLLGSRQPWKKVDYVKAFNWLTYYGGKFSTSQKLGIFTDVALELLPADYW 363 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 RY+L+ D + D VN DLA+ +GN V+R +S K + +P + Sbjct: 364 RYYLMANAPESDDSSFTWDLFAATVNKDLADTLGNFVNRVLSFSRKRFGDEVPAGAPNGD 423 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 ++ ++ + +L E + +A + +L S + Y D PW KT+P+ A+ Sbjct: 424 AETALGEQIAELLAEYEAQLDALNFRKAAQALRALWSAGNSYLDVTAPWTEIKTDPEAAA 483 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491 L + +I A+L + F+P A I D +AD+ R + S D+ Sbjct: 484 RTLRTAINLIHLYAVLSEPFIPTAARTIRDSFALADDTRTWVSADE 529 >gi|325145467|gb|EGC67741.1| methionyl-tRNA synthetase [Neisseria meningitidis M01-240013] Length = 685 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 129/518 (24%), Positives = 222/518 (42%), Gaps = 54/518 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + D I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 + + + D V G + + ++P + + Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182 Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209 E E +FF+L D L ++ ++ P L E N++ ++ G L D + Sbjct: 183 RESEHFFFKLDECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWDI 240 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVI 263 SR +G +IPD P YVW+DA Y+ + L + G KA H I Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHFI 300 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 GKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360 Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439 +D ++L+ + + I E +++ +AL +++L V+ Y DA KPWEL K Sbjct: 420 ----ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEG 475 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +R V + L L +PK+A L Sbjct: 476 QDERLHEVCSELINAFTMLTAYLAPVLPKVAENAAKFL 513 >gi|240081768|ref|ZP_04726311.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|268597867|ref|ZP_06132034.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|268551655|gb|EEZ46674.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae FA19] Length = 700 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 133/513 (25%), Positives = 225/513 (43%), Gaps = 58/513 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 20 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 79 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 80 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 137 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + + Sbjct: 138 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 197 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 198 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 255 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262 +SR +G +IPD P YVW+DA Y+ + L + G +++ AD H Sbjct: 256 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 315 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 316 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 375 Query: 322 VDALRYFLVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 + +RY++ ++ GK D + RVN+DL N+ +R+ I K ++G Sbjct: 376 PEWMRYYIAAKLN-GKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---R 431 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 P + S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 432 PKDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQ 489 Query: 440 --NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 490 EGQDERLHEVCSELINAFTMLTAYLAPVLPQTA 522 >gi|291044838|ref|ZP_06570547.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] gi|291011732|gb|EFE03728.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] Length = 719 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 131/512 (25%), Positives = 221/512 (43%), Gaps = 56/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 39 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 98 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 99 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 156 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + + Sbjct: 157 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 216 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 217 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 274 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHV 262 +SR +G +IPD P YVW+DA Y+ + L + G KA H Sbjct: 275 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHF 334 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 335 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 394 Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G P Sbjct: 395 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---RP 451 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439 + S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 452 KDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 509 Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 510 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 541 >gi|325205130|gb|ADZ00583.1| methionyl-tRNA synthetase [Neisseria meningitidis M04-240196] Length = 684 Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 128/508 (25%), Positives = 220/508 (43%), Gaps = 53/508 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + D I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 + + + D V G + + ++P + + Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182 Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209 E E +FF+L D L ++ ++ P L E N++ ++ G L D + Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVI 263 SR +G +IPD P YVW+DA Y+ + L + G KA H I Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHFI 300 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 GKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360 Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 +D ++L+ + + I E +++ +AL +++L V+ Y DA KPWEL K Sbjct: 420 ----ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEG 475 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKL 469 A + V E+I +L P L Sbjct: 476 QDAR-LHEVCSELINAFTMLTAYLAPVL 502 >gi|260441474|ref|ZP_05795290.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] Length = 700 Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 131/512 (25%), Positives = 221/512 (43%), Gaps = 56/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 20 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 79 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 80 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 137 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + + Sbjct: 138 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 197 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 198 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 255 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHV 262 +SR +G +IPD P YVW+DA Y+ + L + G KA H Sbjct: 256 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHF 315 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 316 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 375 Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G P Sbjct: 376 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---RP 432 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439 + S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 433 KDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 490 Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 491 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 522 >gi|268685620|ref|ZP_06152482.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] gi|268625904|gb|EEZ58304.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] Length = 684 Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 131/512 (25%), Positives = 221/512 (43%), Gaps = 56/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + + Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 181 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGGETTLSDWD 239 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHV 262 +SR +G +IPD P YVW+DA Y+ + L + G KA H Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHF 299 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359 Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G P Sbjct: 360 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---RP 416 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439 + S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 417 KDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 474 Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 475 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506 >gi|240127258|ref|ZP_04739919.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] Length = 700 Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 131/512 (25%), Positives = 221/512 (43%), Gaps = 56/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 20 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 79 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 80 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 137 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + + Sbjct: 138 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 197 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 198 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGGETTLSDWD 255 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHV 262 +SR +G +IPD P YVW+DA Y+ + L + G KA H Sbjct: 256 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHF 315 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 316 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 375 Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G P Sbjct: 376 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---RP 432 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439 + S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 433 KDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 490 Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 491 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 522 >gi|241760687|ref|ZP_04758779.1| methionine--tRNA ligase [Neisseria flavescens SK114] gi|241318868|gb|EER55394.1| methionine--tRNA ligase [Neisseria flavescens SK114] Length = 685 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 128/511 (25%), Positives = 221/511 (43%), Gaps = 54/511 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + D I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 + + + D V G + + ++P + + Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182 Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209 E E +FF+L D L ++ ++ P L E N++ ++ G L D + Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263 SR +G +IPD P YVW+DA Y+ + L + G +++ AD H I Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFI 300 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 GKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360 Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + +RY++ ++ +D + RVN+DL N+ +R+ + K ++G + Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFLSKRFEGRLKDV- 419 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439 S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 420 ----SGSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEG 475 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 476 QDERLHEVCSELINAFTMLTAYLAPVLPQTA 506 >gi|47570792|ref|ZP_00241355.1| methionyl-tRNA synthetase [Bacillus cereus G9241] gi|47552540|gb|EAL11028.1| methionyl-tRNA synthetase [Bacillus cereus G9241] Length = 183 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 78/182 (42%), Positives = 116/182 (63%), Gaps = 8/182 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDIY Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122 Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 Y GWYS++DE +Y + D + +G G+ ++ H+ V+ + EE YFFR+ Y D Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREEIYFFRMGKYVD 181 Query: 175 KL 176 +L Sbjct: 182 RL 183 >gi|282889857|ref|ZP_06298396.1| hypothetical protein pah_c004o273 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500431|gb|EFB42711.1| hypothetical protein pah_c004o273 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 680 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 135/514 (26%), Positives = 225/514 (43%), Gaps = 48/514 (9%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +K+ +++A+ Y N H GH A + D +RF RL +VL+ G+DE+G I +A+ Sbjct: 3 KKILVTSALPYANGPLHFGHIAGAYLPGDCYSRFQRLQKNNVLYVCGSDEYGVAITMSAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG T K VD ++ L+ S+D + RTT K H +T + + G I + Sbjct: 63 LAGRTPKEHVDIFHEVNLNLFKKLNFSFDHYSRTTWKGHAETVHQYFLDLLANGYIEERT 122 Query: 124 YSGWYSLRDEAYYND-----------------DEVYKGADGQYYNAQHNPVQWMEE---- 162 YS D+ + D DE K NP + + Sbjct: 123 TEQLYSEVDQRFLADRYVVGTCPRCGYENARGDECTKCGASYEATDLKNPRSKLTDAPLI 182 Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--W 216 + +F L ++++LL + +S + V +F K +KDL T D W Sbjct: 183 LKPTKHWFLVLDLFKERLLEWIDSK-------NWKPNVSNFAKGYIKDLHARAITRDSTW 235 Query: 217 GIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPAD----LHVIGKDI 267 GI IP D ++YVW DA Y++ T GS +W ++ IGKD Sbjct: 236 GIPIPLPDTEGKVLYVWFDAPIGYISATKEWAELRGSPESWKDYWCDQSTQLVNFIGKDN 295 Query: 268 LRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 + FHA +PA + N P L ++ ++ F +G + SKS G ID + + D + Sbjct: 296 IPFHAAIFPAMTMGQNQPYKLVDELPANEFYNLEGRQFSKSDGWYIDLDDFFKRYTPDQI 355 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 RY + D + ++R N +L GNLV+R + K +G +P Sbjct: 356 RYAIAANAPETSDSEFTWKDFQQRCNIELLGKYGNLVNRVLVFAHKQCEGRVPQKKDLQP 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 D L R+++E ++ + RA V+ L + YFDA++PW+ + RAS Sbjct: 416 IDLGFLENMQRLVEEAAQSYDTFKLRRASQIVMELAQLGNVYFDAKRPWQDAREEATRAS 475 Query: 446 --TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 T + ++ ++ LA++ +P+ A +I+ +L Sbjct: 476 METTIACCLDCLKLLALISFPIIPESAEQIWKML 509 >gi|254492772|ref|ZP_05105943.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae 1291] gi|226511812|gb|EEH61157.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae 1291] Length = 684 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 131/512 (25%), Positives = 221/512 (43%), Gaps = 56/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + + Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 181 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 239 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHV 262 +SR +G +IPD P YVW+DA Y+ + L + G KA H Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHF 299 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359 Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G P Sbjct: 360 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---RP 416 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439 + S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 417 KDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 474 Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 475 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506 >gi|238028342|ref|YP_002912573.1| methionyl-tRNA synthetase [Burkholderia glumae BGR1] gi|237877536|gb|ACR29869.1| Methionyl-tRNA synthetase [Burkholderia glumae BGR1] Length = 718 Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 130/517 (25%), Positives = 223/517 (43%), Gaps = 47/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R ++ +++A+ Y N Q HIGH E I D+ R R+ G +V + D HG I A+ Sbjct: 17 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLRAE 76 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T K +++ R + D IS+D+F T + ++ + D G I + Sbjct: 77 QEGITPKQLIERVWREHKRDFDSYAISFDNFYTTDSDENRVLSETIYLALKDAGLIAERD 136 Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME---------- 161 Y + + D KG A QY + + P + + Sbjct: 137 IEQAYDPVKQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYQPTELLNPYSVVSGATP 195 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213 +FF+LS + ++ + E N++ ++ ++ L D +SR Sbjct: 196 VRKTSTHHFFKLS--DPRCENFLRGWVGGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253 Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY------LDNPDGSKAKFWPADLHVIGKDI 267 +G +IP P YVW+DA Y + LD ++ H IGKDI Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNHCEKLGLDFDAWTRPGSTTEQYHFIGKDI 313 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 L FH ++WPA L + P VF+HGF+ G K+SKS G I I+ + + LR Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDAGLNPEWLR 373 Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ ++ A +D + + + RVN+DL N+ SR+ ++K ++G + + Sbjct: 374 YYFAAKLNATMEDLDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFEGRVQD----SA 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443 + +L+ + +I + + + RAL Q + L V+ Y D KPWE K N Sbjct: 430 MNHPLLASLRGTIPQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWEQAKDPANAVA 489 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V++E R L++ L+ +P++ + L +A Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVVEAVEAFLGIA 526 >gi|268600117|ref|ZP_06134284.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|268584248|gb|EEZ48924.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae MS11] Length = 684 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 131/512 (25%), Positives = 224/512 (43%), Gaps = 56/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + + Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 181 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGGETTLSDWD 239 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262 +SR +G +IPD P YVW+DA Y+ + L + G +++ AD H Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 299 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359 Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G P Sbjct: 360 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---RP 416 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439 + S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 417 KDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 474 Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 475 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506 >gi|227827837|ref|YP_002829617.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.14.25] gi|259511562|sp|C3MW97|SYM_SULIM RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|227459633|gb|ACP38319.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.14.25] Length = 573 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 137/522 (26%), Positives = 250/522 (47%), Gaps = 54/522 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAA 62 K+ +++A Y N+ PH+G+ I+ ADV AR+ RL +VLF +G+DEHG I A Sbjct: 2 KVLVTSAWPYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSGSDEHGTPIEIEA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI-- 119 V K DQ + + +V IS+D++ RT + H R K++ + Sbjct: 62 IKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESETHKKFVREFLLKLTKYVKVSE 121 Query: 120 -----------------YKGC--YSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHNPV 157 KG Y G+ R + N ++ + + + P+ Sbjct: 122 DEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGKAPI 181 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + + + +FF LS + +K+ S+ S E +P ++ + +V GLK S++R WG Sbjct: 182 -FKKSKHWFFDLSEFNEKIRSWISSSNE--MPDNVKSVALGWVSEGLKPRSITRDN-KWG 237 Query: 218 IKIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPAD----LHVIGKD 266 I P +D +YVW +AL Y++ G K +W ++ + IGKD Sbjct: 238 IPAPFIGAEDKS--IYVWFEALLGYISAVIEYFEKKGEVEKWKEYWFSNDIKSYYFIGKD 295 Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGV 322 + FH + PA L+++ LP + + ++L++G+K SKS +G ID E E + V Sbjct: 296 NIPFHVVILPAMLMASGEEYHLPDVIAATEYLLYEGQKFSKSRKIGVWID--EAPELMDV 353 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--P 380 + R+ L+R KD + + VN +L + IGN V+R +SM+ + Y+G++P Sbjct: 354 EYWRFVLIRLRPEEKDTNFTWRETVRIVNTELNDDIGNYVNRILSMLNRYYNGIVPEFRS 413 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 A ++D+ +S+ + + + + + + + +++ V E + Y + + PW+L K Sbjct: 414 DALDDNDKKTISLINEIPKIVGDLFEKGKLKAGTEEMLRFVRECNAYLNLKAPWDLYKAG 473 Query: 441 PD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 + + LY+ V ++ +AILL +P A +I+D+L + + Sbjct: 474 KEVELNNTLYIGVNSVKTIAILLYPLMPSHAQEIYDMLNMGN 515 >gi|48477614|ref|YP_023320.1| methionyl-tRNA synthetase [Picrophilus torridus DSM 9790] gi|68565981|sp|Q6L1M5|SYM_PICTO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|48430262|gb|AAT43127.1| methionyl-tRNA synthetase [Picrophilus torridus DSM 9790] Length = 690 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 138/528 (26%), Positives = 238/528 (45%), Gaps = 61/528 (11%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E++ ++ A+ Y N H+GH A + AD+ RF+RL+G +VLF +G+DE+G I A+ Sbjct: 3 ERILVNCALPYANGPLHLGHIAGAYLAADIFVRFNRLNGNEVLFVSGSDEYGTPITITAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH--------------------- 102 + + D R LDI +D F RTT+ H Sbjct: 63 KNKTSPQNVADIYHREHEQTFKNLDIVFDIFTRTTDPEHVKDVDEFFINLLNKNYLEKRY 122 Query: 103 --HDTCRILWKKISDKGDIYKGC-YSGWYSLR----DEAYYNDDEVYKGADGQYYNAQHN 155 C+ K + D+ I+ C Y G+ R DE D + + + + ++ Sbjct: 123 MVSPYCKSTGKFMPDRY-IHGTCPYCGFNDARGDQCDECGRTLDPI-ELINPRCTSSNEE 180 Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLSR 211 P+ ++ E +F RL D+LL+Y + + + VI+F +S GL+ ++R Sbjct: 181 PL-FIATEHFFLRLDLLSDELLNYLNTRENW------KPNVINFTRSIINEGLRPRPITR 233 Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTG-YLDN--PDGSKAKFW----PADLHV 262 DWG+ IP + +YVW +AL Y+T Y N D KFW + Sbjct: 234 D-IDWGVPIPLNGFEGKRIYVWFEALIGYITGARVYSKNIKDDDYWKKFWLDKNVKSYYF 292 Query: 263 IGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321 IGKD + FH I WPA L++ + LP V ++ ++ +G + SKS G E + V Sbjct: 293 IGKDNIPFHTIIWPAMLIAHGDYNLPYNVPANEYLRFEGAQFSKSRGIGYTVNEALSLVN 352 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + LRY++ + D + + L RVN++L + GN + R + I + Sbjct: 353 KNYLRYYMASIMPETGDSSFSLNELVSRVNSELIDKYGNFIYRVLGFISNRKINIKKC-- 410 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 +SI++ R E E+++N I L + V+ + YF+++ PW + + Sbjct: 411 ----EPDSIINEFKRFFDEYSESIKNIKIKNGLQIWLEAVTLANNYFNSEAPWNI--NDH 464 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489 +R + VL+ ++++ L +L +VP +++I L N F + Sbjct: 465 ERLNQVLFTSLKISMYLTAMLYPYVPSASSEILSSLGFKTVNYKFDDM 512 >gi|240114050|ref|ZP_04728540.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae MS11] Length = 700 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 131/512 (25%), Positives = 224/512 (43%), Gaps = 56/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 20 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 79 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 80 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 137 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + + Sbjct: 138 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 197 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 198 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGGETTLSDWD 255 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262 +SR +G +IPD P YVW+DA Y+ + L + G +++ AD H Sbjct: 256 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 315 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 316 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 375 Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G P Sbjct: 376 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---RP 432 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439 + S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 433 KDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 490 Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 491 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 522 >gi|194099679|ref|YP_002002814.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] gi|193934969|gb|ACF30793.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] Length = 719 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 131/512 (25%), Positives = 220/512 (42%), Gaps = 56/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 39 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 98 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 99 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 156 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + Sbjct: 157 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPE 216 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 217 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGGETTLSDWD 274 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHV 262 +SR +G +IPD P YVW+DA Y+ + L + G KA H Sbjct: 275 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHF 334 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 335 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 394 Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G P Sbjct: 395 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---RP 451 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439 + S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 452 KDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 509 Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 510 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 541 >gi|240126602|ref|ZP_04739488.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|268685183|ref|ZP_06152045.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|268625467|gb|EEZ57867.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] Length = 684 Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 131/512 (25%), Positives = 223/512 (43%), Gaps = 56/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + + + +AD I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121 Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160 + + + D V G + + ++P + Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPE 181 Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208 E E +FF+L D L ++ ++ P L E N++ ++ G L D Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 239 Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262 +SR +G +IPD P YVW+DA Y+ + L + G +++ AD H Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 299 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321 IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359 Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G P Sbjct: 360 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---RP 416 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439 + S ++L+ + I E +N+ RAL +++L V+ Y DA KPWEL K Sbjct: 417 KDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 474 Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 475 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506 >gi|145495850|ref|XP_001433917.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124401038|emb|CAK66520.1| unnamed protein product [Paramecium tetraurelia] Length = 428 Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 97/325 (29%), Positives = 167/325 (51%), Gaps = 45/325 (13%) Query: 28 MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87 MI AD +A++ + L TGTDEHG K+ ++A++ + + + D S F+ +A+ Sbjct: 1 MIYADAIAKYKSVKLL-----TGTDEHGLKVYRSAKHQPL--QQYCDSISNQFKQLANSF 53 Query: 88 DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147 I YD FIRTT+ +H + W + + G I K Y G+Y +E++ N Sbjct: 54 -IKYDQFIRTTDPQHIVKVQKNWNLLQNNGFIIKDTYKGYYCQVEESFVN---------- 102 Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207 H Q++EE+ YFF+ +D L + ++ P +NE+ + + + + Sbjct: 103 ------HKTDQYLEEDNYFFKFD--KDYLETCIKNAPS-----RYQNELKQLIINSIC-I 148 Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267 S ++ + WGI++P+D ++YVW+DAL YL + +HVIGKDI Sbjct: 149 SRPKQRYYWGIEVPNDNNQLIYVWLDALLGYLQEEQH-------------HYMHVIGKDI 195 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 +RFHA+YWP+FL N ++ H + K+SKSLGNVIDP +++++ + +R Sbjct: 196 VRFHALYWPSFLKGINNQSTTELIVHNHWIRNNMKMSKSLGNVIDPFQLLKKYNQNQIRL 255 Query: 328 FLVREIACGKDGFYDKDGLKKRVNA 352 + + + D +++ L+K N Sbjct: 256 YFLTQGPQNMDVSFEESKLEKCWNT 280 >gi|313667363|ref|YP_004047647.1| methionyl-tRNA synthetase [Neisseria lactamica ST-640] gi|313004825|emb|CBN86249.1| methionyl-tRNA synthetase [Neisseria lactamica 020-06] Length = 684 Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 128/508 (25%), Positives = 221/508 (43%), Gaps = 53/508 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L + + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRSHECHYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + D I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKAGGKIESRVI 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 + + + D V G + + ++P + + Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGVKPEL 182 Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209 E E +FF+L D L ++ ++ P L E N++ ++ G L D + Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263 SR +G +IPD P YVW+DA Y+ + L + G +++ AD H I Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFGEYFKADSQAEMYHFI 300 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 GKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360 Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 S ++L+ + + I E +++ RAL +++L V+ Y DA KPWEL K Sbjct: 420 ----SGSALLAKLTAQSEAIAECYESREYARALRDIMALADAVNEYVDANKPWELAKQE- 474 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKL 469 + + V E+I IL P L Sbjct: 475 GQDERLHEVCSELINAFTILTAYLAPVL 502 >gi|159045247|ref|YP_001534041.1| methionyl-tRNA synthetase [Dinoroseobacter shibae DFL 12] gi|187647718|sp|A8LIJ9|SYM_DINSH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|157913007|gb|ABV94440.1| methionyl-tRNA synthetase [Dinoroseobacter shibae DFL 12] Length = 572 Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 119/524 (22%), Positives = 230/524 (43%), Gaps = 49/524 (9%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++AI Y N H+G+ + AD+ AR+ R G +V+F TDEHG AA Sbjct: 3 RILITSAIPYINGIKHLGNLVGSQLPADLYARYARARGHEVMFICATDEHGTPAELAAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + + D+A +S+D F R++ +R+ + K+++ G I + Sbjct: 63 AGKPVAEYCAEMHAVQSDIAKRFGLSFDHFGRSSSERNKALTQYFAGKLAENGLIEEVSE 122 Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160 YS D + D + +G + Q +P + Sbjct: 123 KQVYSHADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTDLE 182 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E + + R SA +D+L ++ +S ++ + + GL+D ++R DWG+ Sbjct: 183 VRETKHLYLRQSALKDQLDAWIDSKTDWPILTTSIAKKWLHDGDGLQDRGITRD-LDWGV 241 Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDG----SKAKFWPAD-------- 259 + P + YVW DA Y+ T + +G + ++W D Sbjct: 242 PVKKGTEDWPGMEGKVFYVWFDAPIEYIAGTAEWADANGLDDAAWERWWRTDKGADEVRY 301 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 + +GKD + FH + +PA ++ + P L + S ++ + G + S S G + + + Sbjct: 302 VQFMGKDNVPFHTLSFPATIMGSGDPWKLVDYIKSFNYLTYDGGQFSTSQGRGVFMDQAL 361 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E + D R++L+ D + + + VN DLA+ +GN SR Y + Sbjct: 362 EILPADYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNFASRVTKFCRSKYGEEV 421 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P GA+ ++E++++ + L+ +M + +A A++ ++ + Y A PW + Sbjct: 422 PAGGAYGPAEEALIAELTTKLRAYEGHMDAMEVRKAAAELRAIWVAGNEYLQAAAPWSVF 481 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 KT+PD A+ ++ + + ++R A+L Q F+P + + + D Sbjct: 482 KTDPDAAAAIIRLGLNLVRFYAVLSQPFIPDASAALLRAMKAED 525 >gi|332161115|ref|YP_004297692.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665345|gb|ADZ41989.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 635 Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 120/468 (25%), Positives = 205/468 (43%), Gaps = 42/468 (8%) Query: 40 LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99 + G V F D HG I AQ G+ + + + S+ + ISYD++ T Sbjct: 1 MRGNQVHFICADDAHGTPIMLKAQQLGIEPEEMIAEMSQEHQQDFAGFAISYDNYHSTHS 60 Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQ 148 + + +++ ++ G I S Y + D V G + + Sbjct: 61 DENRELSSLIYSRLKANGYIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCE 120 Query: 149 YYNAQHNPVQWM--------------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194 A ++P + + E E +FF L A+ D L ++ S L + N Sbjct: 121 VCGATYSPTELIDPKSAVSGATPVMRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVAN 177 Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA- 253 ++ + +SGL+ +SR +G +IPD P YVW+DA Y+ L + G Sbjct: 178 KMQEWFESGLQQWDISRDAPYFGFEIPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDF 237 Query: 254 -KFW----PADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307 +FW ADL H IGKDI+ FH+++WPA L +N P +F HG++ G K+SKS Sbjct: 238 DEFWRKDSEADLYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSR 297 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSV 366 G I ++ + D LRY+ +++ D + + +RVNAD+ N + NL SR+ Sbjct: 298 GTFIKAGTYLKHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNA 357 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 I K + G + A +D ++ + I + N+ +A+ ++++L +R Sbjct: 358 GFINKRFAGKL----ADHLADPALYKTFTDAATSIADAYSNRESSKAIREIMALADIANR 413 Query: 427 YFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 Y D Q PW + K A + + + + R L L+ +P L + Sbjct: 414 YVDEQAPWVVAKEEGRDADLQAICSMGINLFRVLMTYLKPVLPALTER 461 >gi|307566244|ref|ZP_07628690.1| methionine--tRNA ligase [Prevotella amnii CRIS 21A-A] gi|307345048|gb|EFN90439.1| methionine--tRNA ligase [Prevotella amnii CRIS 21A-A] Length = 687 Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 128/510 (25%), Positives = 233/510 (45%), Gaps = 51/510 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ ++ A+ Y N HIGH A + +D+ R+ RL +V+F G+DEHG I Sbjct: 4 KKFKRTTVTAALPYANGGVHIGHLAGVYVPSDIYVRYLRLKKQEVIFIGGSDEHGVPITI 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + D+ + +D + IS+D + RTT H+ +KK+ + G + Sbjct: 64 RARKEGITPQDVCDRYHKMIKDSFNEFGISFDVYSRTTSNVHNKFASDFFKKLYEDGKLI 123 Query: 121 KGCYSGWYSLRDEAYYND----DEVYKGADGQYYNAQ-------------HNPVQWME-- 161 + Y + + D E + Y Q NP + Sbjct: 124 EKEGEQLYDESAKQFLADRYVMGECPHCGNPNAYGDQCEKCGSDLSPLELKNPRSTISGS 183 Query: 162 ------EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213 + ++ L+ YQ+ L + + H E+ R+ V KS L D+ L + Sbjct: 184 KPVLKNTKNWYLPLNNYQEWLKEWILKEHKEW------RSNVYGQCKSWL-DMDLQPRAM 236 Query: 214 ---FDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----L 260 DWGI +P ++YVW DA Y++ T L + + G+ K+W + Sbjct: 237 TRDLDWGIPVPVKGAEGKVLYVWFDAPIGYISNTKELCDKEPERFGNWEKWWKDPETRLI 296 Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 H IGKD + FH I +P L + LP V ++ F+ + +KIS S + E + + Sbjct: 297 HFIGKDNIVFHCIIFPIMLKAHGGYILPDNVPANEFLNLENDKISTSKNWAVWLHEYLVD 356 Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 D LRY L KD + ++R N++L + GN V+R++ + K ++G++ Sbjct: 357 FPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVSIYGNFVNRALQLTKKYWNGIV 416 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G + D+ +++ V +++ ++ A + ++L +RY +PW++ Sbjct: 417 PPCGELKDIDKQVIAEFKDVKEKVEASLDAFKFREAQKEAMNLARIGNRYITECEPWKVW 476 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 KT+P R TVL ++++++ L+I + F+P Sbjct: 477 KTDPKRVETVLNISLQLVANLSIAFEPFLP 506 >gi|149200861|ref|ZP_01877836.1| methionyl-tRNA synthetase [Roseovarius sp. TM1035] gi|149145194|gb|EDM33220.1| methionyl-tRNA synthetase [Roseovarius sp. TM1035] Length = 572 Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 127/525 (24%), Positives = 229/525 (43%), Gaps = 53/525 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R G +VLF TDEHG AA AG Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLFARYCRARGHEVLFLCATDEHGTPAELAAAKAGQ 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + ++A +S+D F R++ ++ + K++ DKG I + + Sbjct: 66 PVADYCAEMHAVQAEIARGFRLSFDHFGRSSSSQNRRLTQNFAKRLHDKGLIREVSETQM 125 Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPV---------------QWME 161 YS D Y D E +G Q +PV + E Sbjct: 126 YSPTDGRYLPDRYIEGTCPNCGYESARGDQCDNCTKQLDPVDLINPRSAVSGATDLEMRE 185 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--LKDLSLSRKTFDWGIK 219 + + R S +D+L ++ +S ++ PI + ++ G L+D ++R DWGI Sbjct: 186 TKHLYLRQSQMKDELEAWIDSKTDW--PILTTSIAKKWLNDGDGLQDRGITRD-LDWGIP 242 Query: 220 IP-DDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPAD--------L 260 + DD + + YVW DA Y+ G +A ++W D Sbjct: 243 VQFDDAPWQGMDGKVFYVWFDAPIEYIACGAEWAEAHGLEASAWERWWRTDKGADDVRYT 302 Query: 261 HVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 +GKD + FH + +PA +L + P L + S ++ + G + S S G + + +E Sbjct: 303 QFMGKDNVPFHTLSFPATILGSAEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALE 362 Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 + D R++L+ D + + + VN DLA+ +GN VSR + ++P Sbjct: 363 ILPADYWRWWLLSHAPESSDSEFTWENFQASVNKDLADVLGNFVSRVTKFCRSKFGEVVP 422 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 T GA+ + +++ + ++E +MQ + ++ + + ++ E + Y PW K Sbjct: 423 TGGAYGAQETALIERLTTRIREYEAHMQAMEVRKSASALRAIWVEGNEYLQEAAPWSTFK 482 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +P+RA+ + + +IR A+L F+P A + + D+N Sbjct: 483 ADPERAAMQTRLALNLIRLYAVLSAPFIPDAAAAMLTAMQTDDDN 527 >gi|242062646|ref|XP_002452612.1| hypothetical protein SORBIDRAFT_04g029070 [Sorghum bicolor] gi|241932443|gb|EES05588.1| hypothetical protein SORBIDRAFT_04g029070 [Sorghum bicolor] Length = 802 Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 132/533 (24%), Positives = 235/533 (44%), Gaps = 67/533 (12%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + I++A+ Y N PH+G+ ++ ADV AR+ RL G + L+ GTDE+G A Sbjct: 17 RRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKA 76 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + K D+ ++ DI +D F RT+ + + C+ ++ K+ + + + Sbjct: 77 MEEKCSPKEICDKYHAIHNEVYKWFDIKFDKFGRTSSPQQTEICQAIFHKLMENNWLTEN 136 Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-QYYNAQH--NPVQWM--------- 160 Y + D V K A G Q N H NP + + Sbjct: 137 TMQQLYCDTCRRFLADRLVEGTCPIEGCTNKAARGDQCDNCSHMLNPTELIDPKCKVCKN 196 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---FVKSGLKDLSLSRK 212 E + F L + KL++Y + + +N + + ++K GLK ++R Sbjct: 197 TPHIRETDHLFLDLPLLEGKLVNYINDTS--VAGMWSQNAIQATNAWLKEGLKSRCITRD 254 Query: 213 TFDWGIKIPDDP--QYIMYVWIDALTNYLTTTG--------YLDNPDGSKAKFWPADLHV 262 WG+ +P + + YVW DA Y++ T + NPD + Sbjct: 255 -LKWGVPVPIEKYKDKVFYVWFDAPIGYVSITASYTPEWEQWWKNPDNVEL------FQF 307 Query: 263 IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIE 315 +GKD + FH I +P+ LL N + K + ++ ++G K SKS GN Sbjct: 308 MGKDNVPFHTIMFPSTLLGTGENWTMMKTISVTEYLNYEGGKFSKSKGIGVFGNDAKDTN 367 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK---- 371 + EV RY+L+ D + L+ ++N++L N +GN ++R +S I K Sbjct: 368 IPPEV----WRYYLLMNRPEASDTLFTWTDLQAKLNSELLNNLGNFINRVLSFIAKPVGA 423 Query: 372 DYDGMIP-TPGAFTESDES-ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 YD +IP PGA + S I S+ +++ + M+ + + L + + ++ +RY Sbjct: 424 GYDSIIPDAPGAESHPSTSDIAEKVSKSVEQYLDAMEKVKLKQGLKSAMGISTDGNRYLQ 483 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + W+L K NP + V+ +V ++ LA LL+ F+P + ++ L ++ E Sbjct: 484 ESEFWKLYKDNPANCAIVMKTSVGLVYLLACLLEPFMPSFSKEVLRQLNLSPE 536 >gi|316983598|gb|EFV62580.1| methionyl-tRNA synthetase [Neisseria meningitidis H44/76] Length = 720 Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 127/511 (24%), Positives = 221/511 (43%), Gaps = 54/511 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + D HG + AAQ Sbjct: 39 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHACHYCCADDTHGTPVMLAAQKQ 98 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + D I YD++ T + + +++ + G I Sbjct: 99 GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 157 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 + + + D V G + + ++P + + Sbjct: 158 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGTKPEL 217 Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209 E E +FF+L D L ++ ++ P L E N++ ++ G L D + Sbjct: 218 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 275 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263 SR +G +IPD P YVW+DA Y+ + L + G +++ AD H I Sbjct: 276 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFI 335 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 GKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 336 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 395 Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 396 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 454 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439 +D +L+ + + I E +++ +AL +++L V+ Y DA KPWEL K Sbjct: 455 ----ADSELLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEG 510 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 511 QDERLHEVCSELINAFTMLTAYLAPVLPQTA 541 >gi|224129132|ref|XP_002328898.1| predicted protein [Populus trichocarpa] gi|222839328|gb|EEE77665.1| predicted protein [Populus trichocarpa] Length = 801 Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 131/519 (25%), Positives = 236/519 (45%), Gaps = 49/519 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV AR+ RL G + ++ GTDE+G A Sbjct: 16 KRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETKA 75 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T K D+ R++ +IS+D+F RT+ + + C+ ++KK+ D + + Sbjct: 76 MEENSTPKQICDKYHAIHREVYKWFNISFDEFGRTSSPQQTEVCQAIFKKLLDNNWLSEN 135 Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-QYYNAQH--NPVQWM--------- 160 Y E + D V Y A G Q N NP + + Sbjct: 136 TMKQLYCDTCERFLADRLVEGTCPTEGCNYDSARGDQCENCGKLLNPTELINPRCKQCKN 195 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---FVKSGLKDLSLSRK 212 + F L +DKL+SY ES + +N + + ++K GLK ++R Sbjct: 196 TPRIRDTNHLFLELPQLKDKLVSYIESMS--VAGSWSQNAIQTTNAWLKEGLKPRCITRD 253 Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKDI 267 WG+ +P D + YVW DA Y++ T PD K P ++ + +GKD Sbjct: 254 -LKWGVPVPLDEFKDKVFYVWFDAPIGYVSITSCY-TPDWEKWWKNPDNVELYQFMGKDN 311 Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324 + FH + +P+ L+ N + K + ++ ++ K SKS G V + V+ Sbjct: 312 VPFHTVMFPSTLIGTGENWTMMKTISVTEYLNYEAGKFSKSKGVGVFGNDAKDTNIPVEV 371 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP-T 379 RY+L+ D + L+ ++N++L N +GN ++R +S + K Y +IP Sbjct: 372 WRYYLLTNRPEVSDTLFTWSDLQAKLNSELLNNLGNFINRVLSFLAKPPGLGYGSIIPDA 431 Query: 380 PGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 PGA + + + + +++ E M+ + + L +S+ SE + Y + W+L K Sbjct: 432 PGADSHPLTKKLAGEVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYK 491 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + S V+ ++ ++ LA LL+ F+P + ++F L Sbjct: 492 EDQPSCSIVIKTSLGLVYLLACLLEPFIPSFSVEVFKQL 530 >gi|315931152|gb|EFV10125.1| methionyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 327] Length = 377 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 81/215 (37%), Positives = 129/215 (60%), Gaps = 2/215 (0%) Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+ +GEK+SKS GNV+ P EV++ Sbjct: 1 MHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGNVVKPKEVVDA 60 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 G +A RYFL+RE+ G DG + ++ L R+NA+L+N GNL++R + M K G I Sbjct: 61 YGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNRIIGMSTKYSQGNILK 120 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 G + L+ L E ++N +R L ++ +S + +PW L K Sbjct: 121 EGVLKYYNTE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVANLAISKYEPWNLIKE 179 Query: 440 NP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 N ++A+ ++ + ++ + ++LL +PK K+ Sbjct: 180 NKHEQANALVALCANILAKTSLLLSPTLPKSCEKV 214 >gi|311087576|gb|ADP67655.1| methionyl-tRNA synthetase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 547 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 123/506 (24%), Positives = 231/506 (45%), Gaps = 50/506 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N HIGH E I AD+ R+HR+ G +V F + D HG I AQ+ Sbjct: 7 KILVTCALPYANGSIHIGHMLEHIQADIWVRYHRMRGHEVWFVSADDAHGTAIMLKAQDL 66 Query: 66 GVTTKVFVDQNSRNFRDMADV----LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 ++ + +N R + IS+D++ T + R ++ +++KG I + Sbjct: 67 EISPNKLI----KNIRIEHQIDFSNFKISHDNYYSTHSLENLYLSRKIFTCLNEKGLIKE 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWME--------- 161 Y + + D + G + + +A + P + Sbjct: 123 KKIFQLYDTVKKIFLPDRFIKGTCPICKSKNQYGDNCEICSATYEPTDLINPISVISGKK 182 Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + +F L ++ + L + S I++ E + K GLK ++SR + Sbjct: 183 PILKNTKHLYFDLPSFTNMLKKWIHSGVLEESVIKKTEE---WFKVGLKSWAISRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269 G KIP+ P YVW+DA Y++ L + + + W + H IGKDI+ Sbjct: 240 GFKIPNHPNKYFYVWLDAPIGYISAFKNLCFKSKKLNFNELWNQNSNYELYHFIGKDIIY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH ++WPA L + + P +F HG + G K+SKS G +I + I+ D+LRY+ Sbjct: 300 FHTLFWPAILEAVSFRQPSGIFVHGHLTMNGLKLSKSRGALIKASDWIQYFDSDSLRYYY 359 Query: 330 VREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +++N+D+ N + NL +R+ S I K ++G + + + + Sbjct: 360 ASKLSNKTHDIEINLEDFIQKINSDIVNKLVNLAARNASFINKYFNGYLSDKLSNIKLYK 419 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRAST 446 ++ S + ++ EN + I + + + L+ ++Y + +KPW++K+T N Sbjct: 420 YFVNTSSSI-EDFFENREFSFI---VKESMRLLDIANQYINEKKPWKIKRTEENIRELQN 475 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472 + + + + R + I L+ VP LA K Sbjct: 476 ICTMGINLFRIIMIFLKPIVPDLAIK 501 >gi|15675970|ref|NP_273096.1| methionyl-tRNA synthetase [Neisseria meningitidis MC58] gi|25009401|sp|Q9K1Q0|SYM_NEIMB RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|7225249|gb|AAF40501.1| methionyl-tRNA synthetase [Neisseria meningitidis MC58] gi|325139494|gb|EGC62034.1| methionyl-tRNA synthetase [Neisseria meningitidis CU385] gi|325199263|gb|ADY94718.1| methionyl-tRNA synthetase [Neisseria meningitidis H44/76] Length = 685 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 127/511 (24%), Positives = 221/511 (43%), Gaps = 54/511 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ +++A+ Y N H+GH E I DV RF +L G + D HG + AAQ Sbjct: 4 KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHACHYCCADDTHGTPVMLAAQKQ 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + + + + D I YD++ T + + +++ + G I Sbjct: 64 GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160 + + + D V G + + ++P + + Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGTKPEL 182 Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209 E E +FF+L D L ++ ++ P L E N++ ++ G L D + Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263 SR +G +IPD P YVW+DA Y+ + L + G +++ AD H I Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFI 300 Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 GKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I +E+ + Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360 Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G + Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439 +D +L+ + + I E +++ +AL +++L V+ Y DA KPWEL K Sbjct: 420 ----ADSELLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEG 475 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 +R V + L L +P+ A Sbjct: 476 QDERLHEVCSELINAFTMLTAYLAPVLPQTA 506 >gi|15616730|ref|NP_239942.1| methionyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681485|ref|YP_002467870.1| methionyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682041|ref|YP_002468425.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471164|ref|ZP_05635163.1| methionyl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11134932|sp|P57210|SYM_BUCAI RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|254782855|sp|B8D8R1|SYM_BUCA5 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|254782856|sp|B8D715|SYM_BUCAT RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|25293139|pir||D84942 methionine-tRNA ligase (EC 6.1.1.10) [imported] - Buchnera sp. (strain APS) gi|10038793|dbj|BAB12828.1| methionyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621774|gb|ACL29930.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624328|gb|ACL30483.1| methionyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311085852|gb|ADP65934.1| methionyl-tRNA synthetase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311087005|gb|ADP67085.1| methionyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 547 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 123/506 (24%), Positives = 231/506 (45%), Gaps = 50/506 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N HIGH E I AD+ R+HR+ G +V F + D HG I AQ+ Sbjct: 7 KILVTCALPYANGSIHIGHMLEHIQADIWVRYHRMRGHEVWFVSADDAHGTAIMLKAQDL 66 Query: 66 GVTTKVFVDQNSRNFRDMADV----LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 ++ + +N R + IS+D++ T + R ++ +++KG I + Sbjct: 67 EISPNKLI----KNIRIEHQIDFSNFKISHDNYYSTHSLENLYLSRKIFTCLNEKGLIKE 122 Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWME--------- 161 Y + + D + G + + +A + P + Sbjct: 123 KKIFQLYDTVKKIFLPDRFIKGTCPICKSKNQYGDNCEICSATYEPTDLINPISVISGKK 182 Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + +F L ++ + L + S I++ E + K GLK ++SR + Sbjct: 183 PILKNTKHLYFDLPSFTNMLKKWIHSGVLEESVIKKTEE---WFKVGLKSWAISRDAPYF 239 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269 G KIP+ P YVW+DA Y++ L + + + W + H IGKDI+ Sbjct: 240 GFKIPNYPNKYFYVWLDAPIGYISAFKNLCFKSKKLNFNELWNQNSNYELYHFIGKDIIY 299 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 FH ++WPA L + + P +F HG + G K+SKS G +I + I+ D+LRY+ Sbjct: 300 FHTLFWPAILEAVSFRQPSGIFVHGHLTMNGLKLSKSRGALIKASDWIQYFDSDSLRYYY 359 Query: 330 VREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 +++ D + + +++N+D+ N + NL +R+ S I K ++G + + + + Sbjct: 360 ASKLSNKTHDIEINLEDFIQKINSDIVNKLVNLAARNASFINKYFNGYLSDKLSNIKLYK 419 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRAST 446 ++ S + ++ EN + I + + + L+ ++Y + +KPW++K+T N Sbjct: 420 YFVNTSSSI-EDFFENREFSFI---VKESMRLLDVANQYINEKKPWKIKRTEENIRELQN 475 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472 + + + + R + I L+ VP LA K Sbjct: 476 ICTMGINLFRIIMIFLKPIVPDLAIK 501 >gi|221055079|ref|XP_002258678.1| trna ligase [Plasmodium knowlesi strain H] gi|193808748|emb|CAQ39450.1| trna ligase, putative [Plasmodium knowlesi strain H] Length = 727 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 79/243 (32%), Positives = 134/243 (55%), Gaps = 10/243 (4%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-----VLFTTGTDEHGQKIAKAA 62 ++ST + Y N +PHIGHAY +++D++ RF + + + V+ +G DEHG KI + + Sbjct: 145 FVSTPVYYANDKPHIGHAYCNVLSDIICRFAKWEYTEGRRKRVILFSGMDEHGLKIERKS 204 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + + + +++ S ++ M D L + + F RTT + H + +WK ++ G IYKG Sbjct: 205 KKLKIPSMEYINNMSSYYQMMNDKLHVHVNIFYRTTSQFHKSFVQQVWKYLTQNGYIYKG 264 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y G+Y + +E Y N+ E+ Q N + EE YFF + ++ L +Y+ Sbjct: 265 TYRGYYDVNEEKYLNEFEL-----KQKEKNDPNILYIEEENSYFFNILKFKKFLTDFYQR 319 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242 E I P + E++ FV LKD+ +SR WGIKIP + + +YVW DAL +Y+++ Sbjct: 320 SDELIYPSYLQKEMLHFVNHELKDVCISRYNTQWGIKIPGEEKGTIYVWFDALLSYVSSV 379 Query: 243 GYL 245 Y+ Sbjct: 380 LYM 382 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 71/235 (30%), Positives = 126/235 (53%), Gaps = 14/235 (5%) Query: 248 PDGSKAKF----WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303 PDG+ ++ W + VIGKDIL+FH + + L S NL LP+K+ HG I + K+ Sbjct: 465 PDGTLSRLFQKAWNPHVQVIGKDILKFHGVLYICLLQSLNLKLPQKIICHGLIKSENVKM 524 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA---DLANGIGN 360 SKS+GNVI P +++E+ D +R + C + F DK+ K+ + + + N +GN Sbjct: 525 SKSIGNVISPFDIVEKYDPDIVRLYF---FGCA-NIFEDKNFKKEHLESFQLFVRNNVGN 580 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+ R +S+ + + I G D I S + Q++ + N+ L +++L Sbjct: 581 LLYRVMSLCMDNNYKHIYKDGQANFLDSPIFRQSSEMKQKLLILIHNKDFALFLENLMAL 640 Query: 421 VSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + +V+++F Q+PW K TN R + ++Y T+E I+ ++ L +P++ + I Sbjct: 641 IKQVNKFFVHQEPW--KCTNDSVRFNQIIYETLEGIKFFSVFLYPIMPQICSSIL 693 >gi|260772448|ref|ZP_05881364.1| methionyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14] gi|260611587|gb|EEX36790.1| methionyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14] Length = 658 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 125/484 (25%), Positives = 208/484 (42%), Gaps = 48/484 (9%) Query: 27 EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADV 86 E I AD+ R+ RL G V F D HG I AQ G+T + + S + Sbjct: 3 EHIQADIWVRYQRLRGNIVNFICADDAHGTPIMLKAQQMGITPEEMIAAVSEEHQQDFAG 62 Query: 87 LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG-- 144 DIS+D++ T + + + ++ ++ G I S + + + D V KG Sbjct: 63 FDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQLFDPEKQMFLPDRFV-KGTC 121 Query: 145 --------------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSYY 180 A G+ Y+ NP + + E +FF L ++ L + Sbjct: 122 PKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEWT 181 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 S L E N++ + + GL+ +SR +G +IP + YVW+DA Y+ Sbjct: 182 RSGS---LQTETANKMQEWFEGGLQQWDISRDAPYFGFEIPGETNKFFYVWLDAPIGYMG 238 Query: 241 TTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 + L + D ++W D H IGKDI+ FH+++WPA L + P VF H Sbjct: 239 SFKNLCSKRNDLDFDEYWRKDSQTELYHFIGKDIVYFHSLFWPAMLEGSGFRKPTNVFVH 298 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNA 352 G++ G K+SKS G + ++ + + LRY+ ++ D + + +RVNA Sbjct: 299 GYVTVNGAKMSKSKGTFVKASTYLKHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVNA 358 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV--LQEIRENMQNQLI 410 D+ N I NL SR+ I K +D + A E + R+ L E RE Sbjct: 359 DVVNKIVNLASRNAGFISKRFDNQLSATFAEPELYAEFAAAAERIAELYETRE------F 412 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPK 468 RA+ ++ +L + ++Y D + PW + K + + V + + R L L+ +P Sbjct: 413 GRAIREITALADKANQYVDEKAPWVIAKQEGQEQALQDICTVGINLFRVLMTYLKPVMPA 472 Query: 469 LANK 472 LA + Sbjct: 473 LAER 476 >gi|282163406|ref|YP_003355791.1| methionyl-tRNA synthetase [Methanocella paludicola SANAE] gi|282155720|dbj|BAI60808.1| methionyl-tRNA synthetase [Methanocella paludicola SANAE] Length = 669 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 125/503 (24%), Positives = 209/503 (41%), Gaps = 45/503 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + ++ + Y N HIGH I AD+ R R+ G + F G+D HG I A+ G Sbjct: 10 VLVTCGLPYANGAAHIGHLRTYIPADMFVRTLRMMGQNTTFVCGSDTHGTPIVVNAEEQG 69 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY----KG 122 T V + F +I ++ + T + +H+ R + + + G +Y K Sbjct: 70 TTPGELVKKYHLVFEQTFKNFEIDFNHYGSTDDLENHERTRSIVRDLEKNGYVYPKEIKV 129 Query: 123 CYSGWYSLRD--EAYYNDDEVYKGADGQYYNAQHNPVQWME------------------- 161 Y G + R + Y Y GA + + +E Sbjct: 130 AYCG-HCQRGLPDRYVEGTCPYCGALARGDECDIGCQKHLEPGDILDPRCRICGGKAETR 188 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 +E +FF+LS + L Y + N + K LKD ++R +WG+K Sbjct: 189 VKEHFFFKLSEFGPFLTDYLNK----LHATSNVNYAKEWAKD-LKDWCITR-NLEWGVKY 242 Query: 221 PDDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWP 276 P ++YVW+DA Y+ T Y+ + W D +H IG DI+ H I+WP Sbjct: 243 PGHEDLVVYVWVDAPIGYIAFTEEYMSSIGEDWKNIWKGDSRIIHFIGGDIIYHHCIFWP 302 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV--IDPIEVIEEVGVDALRYFLVREIA 334 A L A LP V + G I +K SKS G + ++ + D LRY+++ + Sbjct: 303 AMLKGAGYTLPWGVVASGMIKVNDKKFSKSRGYIVWVEDDYLAHGFHPDLLRYYILSYTS 362 Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 KD + + +VN +L GN V+R ++ I + G+ E D S+ Sbjct: 363 HTKDINFSWKEFQTKVNKELVGSFGNFVNRVLTFI--ESKGL----DVKGEIDPSVSEAI 416 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 + + ++N + +I+L + YF +PW+L K + VLY ++ Sbjct: 417 KTAMSVAKAEIENYEFKKICDSIITLADFGNTYFQGHEPWKLIKEDKAACENVLYNCTQI 476 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 ++ LAIL +P A +I+ +L Sbjct: 477 VKALAILSWPSIPAKAEEIWGML 499 >gi|301026438|ref|ZP_07189877.1| methionyl-tRNA synthetase [Escherichia coli MS 196-1] gi|299879675|gb|EFI87886.1| methionyl-tRNA synthetase [Escherichia coli MS 196-1] Length = 618 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 111/448 (24%), Positives = 203/448 (45%), Gaps = 45/448 (10%) Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 AQ G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 4 AQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKN 63 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME-------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 64 RTISQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGA 122 Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR Sbjct: 123 TPVMRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPY 179 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDI 267 +G +IP+ P YVW+DA Y+ + L + G F W D H IGKDI Sbjct: 180 FGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDI 239 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FH+++WPA L +N P +F HG++ G K+SKS G I + D+LRY Sbjct: 240 VYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRY 299 Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A + Sbjct: 300 YYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ANELA 355 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-- 444 D + + + I E +++ +A+ ++++L +RY D Q PW + K A Sbjct: 356 DPQLYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADL 415 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANK 472 + + + + R L L+ +PKL + Sbjct: 416 QAICSMGINLFRVLMTYLKPVLPKLTER 443 >gi|238749949|ref|ZP_04611453.1| Methionyl-tRNA synthetase [Yersinia rohdei ATCC 43380] gi|238711878|gb|EEQ04092.1| Methionyl-tRNA synthetase [Yersinia rohdei ATCC 43380] Length = 635 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 122/469 (26%), Positives = 206/469 (43%), Gaps = 44/469 (9%) Query: 40 LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99 + G V F D HG I AQ G+ + + + S+ + ISYD++ T Sbjct: 1 MRGNQVHFICADDAHGTPIMLKAQQLGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHS 60 Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY---- 149 + + +++ ++ G I S Y ++ + D KG A QY Sbjct: 61 DENRELSSLIYGRLKANGYIKNRTISQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNC 119 Query: 150 --YNAQHNPVQWM--------------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193 A ++P + + E E +FF L A+ D L ++ S L + Sbjct: 120 EVCGATYSPTELIDPKSAVSGATPVLRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVA 176 Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGS 251 N++ + +SGL+ +SR +G +IPD P YVW+DA Y+ L + D Sbjct: 177 NKMQEWFESGLQQWDISRDAPYFGFEIPDAPGKYFYVWLDAPIGYMGAFKNLCDKRDDLD 236 Query: 252 KAKFW----PADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 +FW DL H IGKDI+ FH+++WPA L + P +F HG++ G K+SKS Sbjct: 237 FDEFWREGSTTDLYHFIGKDIVYFHSLFWPAMLEGSQFRKPTNLFVHGYVTVNGAKMSKS 296 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRS 365 G I ++ + D LRY+ +++ D + + +RVNAD+ N + NL SR+ Sbjct: 297 RGTFIKAGTYLKHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRN 356 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 I K +DG + A +D + + I + N+ +A+ ++++L + Sbjct: 357 AGFISKRFDGKL----ADQLADPELYKTFTDAAVSIADAYSNRESSKAIREIMALADIAN 412 Query: 426 RYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 RY D Q PW + K A + + + + R L L+ +P L + Sbjct: 413 RYVDEQAPWVVAKAEGRDADLQAICSMGINLFRVLMTYLKPVLPALTER 461 >gi|182682199|ref|YP_001830359.1| methionyl-tRNA synthetase [Xylella fastidiosa M23] gi|32130163|sp|Q87B68|SYM_XYLFT RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|226710940|sp|B2I7S0|SYM_XYLF2 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|28057584|gb|AAO29432.1| methionyl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|182632309|gb|ACB93085.1| methionyl-tRNA synthetase [Xylella fastidiosa M23] Length = 702 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 140/536 (26%), Positives = 226/536 (42%), Gaps = 43/536 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G + F D HG I AA+ AG+ Sbjct: 18 VTTALPYANGPLHLGHLVGYIQADIWVRARRLGGHNTWFVCADDTHGTPIMLAAEKAGMP 77 Query: 69 TKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A ++++D + T + + + G I + + Sbjct: 78 PEAFIATTQASHERDFA-AFNVAFDHYDSTHSPVNRHLTEQSYLTLKQAGHITCRSVAQF 136 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQW-------------MEEE 163 Y + D V GA QY A ++P + + + Sbjct: 137 YDPAKGMFLPDRYVKGTCPNCGATDQYGDNCEACGATYDPTELKNPYSVISGATPELRDS 196 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 +FF A+ D L ++ S + ++ + + K GL+ +SR +G KIPD Sbjct: 197 EHFFFEVAHFDTFLRHWLSGDVALPSVKNKLKEWLDAKGGLRPWDISRDAPYFGFKIPDQ 256 Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYWPA 277 P YVW+DA YL + L G ++ H IGKDI+ FHA++WPA Sbjct: 257 PGKYFYVWLDAPIGYLCSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWPA 316 Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACG 336 L P ++ +G++ G K+SKS G I ++ + DALRY+ + + Sbjct: 317 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFIMARTYLDAGLEPDALRYYFAAKSSGD 376 Query: 337 KDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 D + RVNADL + NL SR S I ++G + A T D Sbjct: 377 VDDLDLNLSDFVARVNADLVGKLVNLASRCASFIGTRFNGQL----ADTLPDRIQYDRFV 432 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY-VTVEV 454 L IR+ + A+ Q + L E ++Y D KPW + K + A L+ V + Sbjct: 433 AALTPIRDAYERNDTASAIRQTMQLADEANKYIDETKPWIIAKQH--HADAQLHAVCTQG 490 Query: 455 IRQLAILLQAFVPKLAN-KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 + +L+ A P L + I F+A +Q ++Q L G + + + P+F R Sbjct: 491 LNLFRVLITALKPILPHTSIQAETFLAAPVTAWQDVNQPLTGGHTI-QPYSPLFTR 545 >gi|77747705|ref|NP_779783.2| methionyl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|307578469|gb|ADN62438.1| methionyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 690 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 140/536 (26%), Positives = 226/536 (42%), Gaps = 43/536 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G + F D HG I AA+ AG+ Sbjct: 6 VTTALPYANGPLHLGHLVGYIQADIWVRARRLGGHNTWFVCADDTHGTPIMLAAEKAGMP 65 Query: 69 TKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A ++++D + T + + + G I + + Sbjct: 66 PEAFIATTQASHERDFA-AFNVAFDHYDSTHSPVNRHLTEQSYLTLKQAGHITCRSVAQF 124 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQW-------------MEEE 163 Y + D V GA QY A ++P + + + Sbjct: 125 YDPAKGMFLPDRYVKGTCPNCGATDQYGDNCEACGATYDPTELKNPYSVISGATPELRDS 184 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 +FF A+ D L ++ S + ++ + + K GL+ +SR +G KIPD Sbjct: 185 EHFFFEVAHFDTFLRHWLSGDVALPSVKNKLKEWLDAKGGLRPWDISRDAPYFGFKIPDQ 244 Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYWPA 277 P YVW+DA YL + L G ++ H IGKDI+ FHA++WPA Sbjct: 245 PGKYFYVWLDAPIGYLCSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWPA 304 Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACG 336 L P ++ +G++ G K+SKS G I ++ + DALRY+ + + Sbjct: 305 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFIMARTYLDAGLEPDALRYYFAAKSSGD 364 Query: 337 KDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 D + RVNADL + NL SR S I ++G + A T D Sbjct: 365 VDDLDLNLSDFVARVNADLVGKLVNLASRCASFIGTRFNGQL----ADTLPDRIQYDRFV 420 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY-VTVEV 454 L IR+ + A+ Q + L E ++Y D KPW + K + A L+ V + Sbjct: 421 AALTPIRDAYERNDTASAIRQTMQLADEANKYIDETKPWIIAKQH--HADAQLHAVCTQG 478 Query: 455 IRQLAILLQAFVPKLAN-KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 + +L+ A P L + I F+A +Q ++Q L G + + + P+F R Sbjct: 479 LNLFRVLITALKPILPHTSIQAETFLAAPVTAWQDVNQPLTGGHTI-QPYSPLFTR 533 >gi|238795773|ref|ZP_04639287.1| Methionyl-tRNA synthetase [Yersinia mollaretii ATCC 43969] gi|238720499|gb|EEQ12301.1| Methionyl-tRNA synthetase [Yersinia mollaretii ATCC 43969] Length = 635 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 119/469 (25%), Positives = 207/469 (44%), Gaps = 44/469 (9%) Query: 40 LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99 + G V F D HG I AQ G+ + + + S+ + ISYD++ T Sbjct: 1 MRGNQVHFICADDAHGTPIMLKAQQLGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHS 60 Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA------------DG 147 + + +++ ++ G I S Y ++ + D KG + Sbjct: 61 DENRELSSLIYSRLKANGYIKNRTISQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNC 119 Query: 148 QYYNAQHNPVQWM--------------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193 + A ++P + + E E +FF L A+ D L ++ S L + Sbjct: 120 EVCGATYSPTELIDPKSAVSGATPVMRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVA 176 Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253 N++ + +SGL+ +SR +G +IPD P YVW+DA Y+ L + G Sbjct: 177 NKMQEWFESGLQQWDISRDAPYFGFEIPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLD 236 Query: 254 --KFW----PADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 +FW ADL H IGKDI+ FH+++WPA L +N P +F HG++ G K+SKS Sbjct: 237 FDEFWRKDSDADLYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKS 296 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRS 365 G I ++ + D LRY+ +++ D + + +RVNAD+ N + NL SR+ Sbjct: 297 RGTFIKAGTYLKHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRN 356 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 I K + G + A +D ++ + I + ++ +A+ ++++L + Sbjct: 357 AGFINKRFAGKL----ADQLADPALYKTFTDAAVSIADAYNSRESSKAIREIMALADVAN 412 Query: 426 RYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 RY D Q PW + K A + + + + R L L+ +P L + Sbjct: 413 RYIDEQAPWVVAKEEGRDAELQAICSMGINLFRVLMTYLKPVLPSLNER 461 >gi|188992353|ref|YP_001904363.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. B100] gi|226710938|sp|B0RWA1|SYM_XANCB RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|167734113|emb|CAP52319.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 694 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 133/504 (26%), Positives = 212/504 (42%), Gaps = 54/504 (10%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G F D HG I AA+ AGVT Sbjct: 7 VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66 Query: 69 TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A +++D + T + + + K+ G I + + + Sbjct: 67 PEAFIANIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYTKLEAAGHISRRSVAQF 125 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162 Y + D + G+ QY A + P + E Sbjct: 126 YDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 E +FF + + L + + + LP ++ + + + GL+ +SR +G +IP Sbjct: 186 EHFFFEVGHFDGFLREWLDG--DVALPGVKAKLKEWLDAEGGLRAWDISRDAPYFGFQIP 243 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-----AKFWPADL-HVIGKDILRFHAIYW 275 P YVW+DA YL + L G A +L H IGKDI+ FH ++W Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFQAHLAAGTQTELHHFIGKDIVNFHGLFW 303 Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREI 333 PA L P ++ +G+++ G K+SKS G + +VG+ +ALRY+ + Sbjct: 304 PAVLHGTGHRAPTRLHVNGYLMVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKS 362 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG----MIPTPGAFTESDE 388 + G D + RVNADL NL SR I K +DG +P P + E Sbjct: 363 SGGVDDLDLNLGDFVARVNADLVGKFVNLASRCAGFIGKRFDGKLADALPDPAQYARFVE 422 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--ST 446 + L IRE + A+ Q ++L E ++Y D KPW + K A + Sbjct: 423 A--------LAPIREAYERNDPASAIRQTMALADEANKYIDDTKPWVIAKQEGADAQLQS 474 Query: 447 VLYVTVEVIRQLAILLQAFVPKLA 470 V + + R L L+ +P+ A Sbjct: 475 VCTQGLNLFRLLVAALKPILPRTA 498 >gi|253795688|ref|YP_003038784.1| putative methionyl-tRNA synthetase [Candidatus Hodgkinia cicadicola Dsem] gi|253739996|gb|ACT34331.1| putative methionyl-tRNA synthetase [Candidatus Hodgkinia cicadicola Dsem] Length = 494 Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 133/510 (26%), Positives = 219/510 (42%), Gaps = 54/510 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVL----ARFHRLDGLDVLFTTGTDEHGQKIA 59 R++ + TA+AY NA H GHA+E+ A VL A++H D GTD+HG K+ Sbjct: 11 RKRYTVCTALAYTNACVHAGHAFELAAAAVLSAYIAKWH-----DTRLVCGTDDHGLKLK 65 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD-KGD 118 +A V N+ +A L D++ T RH +K++ K Sbjct: 66 ASADWLKVHPVKLAVVNANKALALASRLRAPVSDWLSTLHVRHTRRAESCLRKVTRLKKW 125 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +Y+ Y GWYS +AY DD+V +G Y + PV+W +E G F +A + KL S Sbjct: 126 VYELSYCGWYSPYADAYCGDDDVSLSRNGMYM-CEGQPVEWAQERGVFLNYNALKPKLAS 184 Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWGIKI-PDDPQYIMYVWIDALT 236 Y + + +R V + +K+ +++ SR+ +G+K + + ++VW +AL Sbjct: 185 VYRADVILTPNVSKRAVVSAVMKA--QNVCFSRQPAAGYGLKFKTKEAKLSLWVWFEALM 242 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 Y G +HV+G+D+ FH Y+ A L N LPK V H + Sbjct: 243 AYAGAGGV-------------NKIHVVGRDVFWFHITYYVALALCLNQKLPKAVLCHAHV 289 Query: 297 LHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK----DGFYDKDGLKKRVN 351 G K+SKSLG D + + + DA+++ L C K + D DG R Sbjct: 290 AENGRRKLSKSLG---DELVSLPQTW-DAIKHAL-----CSKPNKANVAVDADG-ASRFR 339 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 A +A +GNLV R + K G + +D + + ++ + Sbjct: 340 AQIAKALGNLVKR----LTKLTATRGAKAGKLSANDWIHIMYAKHAPKVVKHHAMRLRFG 395 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 + +A + +++ + KPW L+ + + +Y T + L+ F+ A+ Sbjct: 396 QVVAFLTGRIAKTNASLSKLKPW-LRADAAHKLAVWIYTTAVFTK----WLEPFLGHSAS 450 Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHK 501 I D L AD F D++ P K Sbjct: 451 SIIDALLTADHT--FTPFDRKPPPAISRQK 478 >gi|124802025|ref|XP_001347338.1| methionine-tRNA ligase, putative [Plasmodium falciparum 3D7] gi|23494916|gb|AAN35251.1| methionine-tRNA ligase, putative [Plasmodium falciparum 3D7] Length = 749 Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 84/246 (34%), Positives = 138/246 (56%), Gaps = 8/246 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-----VLFTTGTDEHGQKIA 59 E L IST + Y N +PHIGHAY I+ DVL ++ +L G++ ++F +G DEHG KI Sbjct: 142 EYLLISTPVYYSNDRPHIGHAYCNILCDVLYKYEKLKGVEKKKKGIIFFSGMDEHGLKIE 201 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 K + ++D S ++DM L + + F RT+ H + +WK + I Sbjct: 202 KKCNKNKMKIIEYIDDISNYYKDMNKKLSVDVNLFYRTSYSFHKMFVQNVWKYLVHNNYI 261 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 YK Y G+Y++ +E Y ++ E+ +G+Y N + EE YFF + ++D L+ + Sbjct: 262 YKDTYKGYYNINEERYISEQEL---REGKYKIDNENIIYVEEENSYFFNILKFKDYLIDF 318 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 YE + FI P R +VI +K+ L+++ +SR W I+IP++ + +YVW DAL +Y+ Sbjct: 319 YEKNENFIYPPYLRKQVIYTLKNELRNICISRYNTKWAIQIPNEAEGTIYVWFDALLSYV 378 Query: 240 TTTGYL 245 ++ YL Sbjct: 379 SSMLYL 384 Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 84/261 (32%), Positives = 144/261 (55%), Gaps = 27/261 (10%) Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 KFW + VIGKDIL FHAI + L S NL LP+K+ HG I ++ K+SKSL NV++P Sbjct: 496 KFWNPFIQVIGKDILNFHAILYICLLKSLNLELPQKILCHGLIKNENIKMSKSLNNVVNP 555 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA---DLANGIGNLVSRSVSMIL 370 +++++ D LR + + CG + DK+ ++ + + L N +GNL+ R VS+ + Sbjct: 556 FDLLKKYNPDVLRLYF---MGCG-SIYEDKNYKEQNIESFELFLRNNVGNLLYRVVSLCI 611 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH--------RALAQVISLVS 422 ++ M+P + D +I +L E ++N++N+LI + L +++L+ Sbjct: 612 ENNYNMVPVIKT-NDYDSNI------ILNEWKDNIKNKLIPYLDNMEYIQFLELIMTLIK 664 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF-DILF--V 479 V+++F PW KK + T +YVT+E ++ +IL+ F+P ++ I +I F + Sbjct: 665 NVNKFFVHNTPWNYKK-DTQHFHTTIYVTLECMKYFSILMFPFIPNISLAILRNIGFDDI 723 Query: 480 ADENRCFQSLDQRLKPGFMLH 500 +EN L+ R FML+ Sbjct: 724 DEENISLDMLETR-TTKFMLN 743 >gi|21230796|ref|NP_636713.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769206|ref|YP_243968.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|25009358|sp|Q8PAY7|SYM_XANCP RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|81304835|sp|Q4USM5|SYM_XANC8 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|21112396|gb|AAM40637.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574538|gb|AAY49948.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] Length = 696 Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 133/504 (26%), Positives = 212/504 (42%), Gaps = 54/504 (10%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G F D HG I AA+ AGVT Sbjct: 7 VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66 Query: 69 TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A +++D + T + + + K+ G I + + + Sbjct: 67 PEAFIANIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYTKLEAAGHISRRSVAQF 125 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162 Y + D + G+ QY A + P + E Sbjct: 126 YDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 E +FF + + L + + + LP ++ + + + GL+ +SR +G +IP Sbjct: 186 EHFFFEVGHFDGFLREWLDG--DVALPGVKAKLKEWLDAEGGLRAWDISRDAPYFGFQIP 243 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-----AKFWPADL-HVIGKDILRFHAIYW 275 P YVW+DA YL + L G A +L H IGKDI+ FH ++W Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFQAHLAAGTQTELHHFIGKDIVNFHGLFW 303 Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREI 333 PA L P ++ +G+++ G K+SKS G + +VG+ +ALRY+ + Sbjct: 304 PAVLHGTGHRAPTRLHVNGYLMVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKS 362 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG----MIPTPGAFTESDE 388 + G D + RVNADL NL SR I K +DG +P P + E Sbjct: 363 SGGVDDLDLNLGDFVARVNADLVGKFVNLASRCAGFIGKRFDGKLADALPDPAQYARFVE 422 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--ST 446 + L IRE + A+ Q ++L E ++Y D KPW + K A + Sbjct: 423 A--------LAPIREAYERNDPASAIRQTMALADEANKYIDDTKPWVIAKQEGADAQLQS 474 Query: 447 VLYVTVEVIRQLAILLQAFVPKLA 470 V + + R L L+ +P+ A Sbjct: 475 VCTQGLNLFRLLVAALKPILPRTA 498 >gi|320156804|ref|YP_004189183.1| methionyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] gi|319932116|gb|ADV86980.1| methionyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] Length = 660 Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 133/519 (25%), Positives = 218/519 (42%), Gaps = 60/519 (11%) Query: 27 EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADV 86 E I AD+ R+ RL G V F D HG I AQ G++ + + S + Sbjct: 3 EHIQADIWVRYQRLRGNIVNFICADDAHGTPIMLKAQQMGMSPEEMIAAVSIEHQKDFAG 62 Query: 87 LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG-- 144 DIS+D++ T + + ++ ++ G I S + E + D V KG Sbjct: 63 FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQLFDPEKEMFLPDRFV-KGTC 121 Query: 145 --------------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSYY 180 A G+ Y+ NP + + E +FF L ++ L + Sbjct: 122 PKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEWT 181 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240 S L E N++ + +SGL+ +SR +G +IP + YVW+DA Y+ Sbjct: 182 RSGS---LQTETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYMG 238 Query: 241 TTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 + L + D ++W D H IGKDI+ FH+++WPA L + P VF H Sbjct: 239 SFKNLCDKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSLFWPAMLDGSGFRKPNNVFVH 298 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNA 352 G++ G K+SKS G + +E + + LRY+ ++ D + + +RVNA Sbjct: 299 GYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVNA 358 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV--LQEIRENMQNQLI 410 D+ N I NL SR+ I K ++G + E ++ R+ L E RE Sbjct: 359 DVVNKIVNLASRNAGFIAKRFEGKLAENFVEPELYNEFVAAADRIAELYEARE------F 412 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPK 468 RA+ ++ +L + ++Y D + PW + K + V + + R L L+ +P Sbjct: 413 GRAIREITALADKANQYVDEKAPWVVAKQEGKDQELQEICSVGINLFRVLMTYLKPVMPA 472 Query: 469 LANKIFDIL------------FVADENRCFQSLDQRLKP 495 LA + L A E F++L R+ P Sbjct: 473 LAARTEAFLNEELTWEGVAQPLTAHEITAFKALFNRIDP 511 >gi|330836672|ref|YP_004411313.1| methionyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] gi|329748575|gb|AEC01931.1| methionyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] Length = 748 Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 136/514 (26%), Positives = 237/514 (46%), Gaps = 48/514 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 MK+R I++A+ Y N PH+G+ +++ ADV ARF R G + L+ GTDE+G Sbjct: 10 MKKRR--LITSALPYVNNIPHLGNLTQVLSADVFARFCRSKGYETLYVCGTDEYGTATET 67 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A GVT + D+ RD+ +IS+D F RT+ + ++ + G I+ Sbjct: 68 KALQEGVTPQELCDRYHAIHRDIYRWFNISFDHFGRTSTPLQTKIVQDIFNAVDANGYIH 127 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWMEEEGYFFRL 169 + Y D+ Y D V Y+ A G Q N NP ++ Sbjct: 128 EHEIEQLYCTHDQMYLADRYVTGTCPHCAYENARGDQCENCGTLLNPTDLIKPVCGVCGN 187 Query: 170 SAYQDKLLSYYESHPEFILPIERR------------NEVI----SFVKSGLKDLSLSRKT 213 + K Y P+ ILP+ N I ++++ GLK+ ++R Sbjct: 188 TPELRKTKHLYLDLPQ-ILPLLEEWMQKASVEGFWANNAIQMTKAWIREGLKERGITRD- 245 Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKD 266 W I +P + YVW DA Y++ T L + +W P ++ + IGKD Sbjct: 246 LKWSIPVPRKGYENKVFYVWFDAPIGYISITANLTD---QWETWWRNPENVELFQFIGKD 302 Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 + FH + +P+ L+ + + S ++ ++G K SKS G I +V + + VD Sbjct: 303 NIPFHTVIFPSSQLATGQKWTMLHHMSSTEYLNYEGGKFSKSKGIGIFGNDVQDTGIPVD 362 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 R+++ D + +++VN +L + NLV+R++S I + YDG +P+ G+ Sbjct: 363 IWRFYMYYNRPETSDVTFTWKDFQEKVNGELIGNLSNLVNRTLSFIKRFYDGELPS-GSI 421 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 E+ + ++ V++ + E + + AL + +L ++ F A +PW+ + T+P R Sbjct: 422 DENLMTQVAEKEAVIEALLERAEER---DALRTIFALSDIGNKAFQAGEPWKTRTTDPTR 478 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A+ +L V VI +A+L+ F+P + KI L Sbjct: 479 AADLLTTLVYVIHDIAVLIAPFMPGTSEKILGWL 512 >gi|77747505|ref|NP_297839.2| methionyl-tRNA synthetase [Xylella fastidiosa 9a5c] Length = 690 Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 137/535 (25%), Positives = 226/535 (42%), Gaps = 41/535 (7%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G + F D HG I AA+ AG+ Sbjct: 6 VTTALPYANGPLHLGHLVGYIQADIWVRARRLGGHNTWFVCADDTHGTPIMLAAEKAGMP 65 Query: 69 TKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A ++++D + T + + + G I + + Sbjct: 66 PEAFIATTQASHERDFA-AFNVAFDHYDSTHSPVNRHLTEQSYLTLKQAGHITCRSVAQF 124 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQW-------------MEEE 163 Y + D V GA QY A ++P + + + Sbjct: 125 YDPAKGMFLPDRYVKGTCPNCGATDQYGDNCEACGATYDPTELKNPYSVISGTTPELRDS 184 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 +FF A+ D L ++ S + ++ + + K GL+ +SR +G +IP+ Sbjct: 185 EHFFFEVAHFDTFLRHWLSGDVALPSVKNKLKEWLDAKGGLRPWDISRDAPYFGFEIPNQ 244 Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYWPA 277 P YVW+DA YL + L G ++ H IGKDI+ FHA++WPA Sbjct: 245 PGKYFYVWLDAPIGYLCSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWPA 304 Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACG 336 L P ++ +G++ G K+SKS G I ++ + DALRY+ + + Sbjct: 305 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFIMARTYLDAGLEPDALRYYFAAKSSGD 364 Query: 337 KDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 D + RVNADL + NL SR S I ++G + A T D Sbjct: 365 VDDLDLNLSDFVARVNADLVGKLVNLASRCASFIGTRFNGQL----ADTLPDRIQYDQFV 420 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 L IR+ + A+ Q + L E ++Y D KPW + K + + + + V + + Sbjct: 421 AALTPIRDAYERNDTASAIRQTMQLADEANKYIDETKPWIIAKQH-NADAQLHAVCTQGL 479 Query: 456 RQLAILLQAFVPKLAN-KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 +L+ A P L + I F+A +Q ++Q L G +H + P+F R Sbjct: 480 NLFRVLITALKPILPHTSIQAETFLAAPVTAWQDVNQPLIGGHTIHP-YSPLFTR 533 >gi|78187048|ref|YP_375091.1| methionyl-tRNA synthetase [Chlorobium luteolum DSM 273] gi|123771060|sp|Q3B3N3|SYM_PELLD RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|78166950|gb|ABB24048.1| methionyl-tRNA synthetase [Chlorobium luteolum DSM 273] Length = 702 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 129/559 (23%), Positives = 239/559 (42%), Gaps = 62/559 (11%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M + ++ ++TA+ Y N H+GH A + AD+ R RL G +VL G+DEHG I Sbjct: 1 MAQFKRTLVTTALPYANGPVHLGHLAGVYLPADIYVRHKRLKGEEVLHIGGSDEHGVPIT 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G++ + VD+ R + IS+D + RT+ + HH+T + + ++ KG Sbjct: 61 ITAEKEGISPRDVVDRYHRMNLEAFLKCGISFDCYGRTSSELHHETAQEFFLELERKGIF 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG---- 164 + +Y + +D V G + +P++ + + Sbjct: 121 NRRTEKLFYDAEGGRFLSDRYVSGTCPICGSTEASGDQCEQCGTHLSPMELINPKSKISN 180 Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLS 210 ++F L YQ +L + SH + + R+ V+++ +K GL D +++ Sbjct: 181 ATPELRDTLHWYFPLGRYQAELERFVNSHED-----DWRSNVLNYTRTWLKGGLNDRAIT 235 Query: 211 RKTFDWGIKIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD----- 259 R +WGIK+P + ++YVW DA+ Y++ T G + + W + Sbjct: 236 RD-LNWGIKVPLGEAEAVGKVLYVWFDAVLGYISFTRQWAEEQGDRDLWRHWWQNPETRL 294 Query: 260 LHVIGKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVID 312 + IGKD + FH + PA L++ N L V + F+ +G K SKS + Sbjct: 295 VQFIGKDNVVFHTLMLPAILMAWNEGREDGIYNLADNVPASEFMNFEGRKFSKSRNYAVY 354 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 E +++ D LRY + KD + + R N +LA+ +GN + RS+ Sbjct: 355 LGEFLQKFPADTLRYSIAMNYPENKDTDFSWTDFQNRTNGELADTLGNFIKRSIDFTNSR 414 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV-ISLVSEVDRYFDAQ 431 + G +P E + L + Q + R A + + + +R+ + Sbjct: 415 FGGEVPHSCTVQEWEG--LGIDWYATQSQLDQAYEGFHFREAATIAMDIARAANRFLTSA 472 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-----NRCF 486 +PW+ KT+P+ A + +++ + L+I L +P+ ++I +L +C Sbjct: 473 EPWKAIKTDPEAAGRTMALSLNLCHALSIALYPVIPETCDRIHRMLGFKGGVDGLVRKCE 532 Query: 487 QSLDQRLKPGFMLHKTFDP 505 L L+P + P Sbjct: 533 PILKTLLEPALPMGHKLSP 551 >gi|25009404|sp|Q9PFV8|SYM_XYLFA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|9105408|gb|AAF83359.1|AE003902_4 methionyl-tRNA synthetase [Xylella fastidiosa 9a5c] Length = 702 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 137/535 (25%), Positives = 226/535 (42%), Gaps = 41/535 (7%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G + F D HG I AA+ AG+ Sbjct: 18 VTTALPYANGPLHLGHLVGYIQADIWVRARRLGGHNTWFVCADDTHGTPIMLAAEKAGMP 77 Query: 69 TKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A ++++D + T + + + G I + + Sbjct: 78 PEAFIATTQASHERDFA-AFNVAFDHYDSTHSPVNRHLTEQSYLTLKQAGHITCRSVAQF 136 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQW-------------MEEE 163 Y + D V GA QY A ++P + + + Sbjct: 137 YDPAKGMFLPDRYVKGTCPNCGATDQYGDNCEACGATYDPTELKNPYSVISGTTPELRDS 196 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 +FF A+ D L ++ S + ++ + + K GL+ +SR +G +IP+ Sbjct: 197 EHFFFEVAHFDTFLRHWLSGDVALPSVKNKLKEWLDAKGGLRPWDISRDAPYFGFEIPNQ 256 Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYWPA 277 P YVW+DA YL + L G ++ H IGKDI+ FHA++WPA Sbjct: 257 PGKYFYVWLDAPIGYLCSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWPA 316 Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACG 336 L P ++ +G++ G K+SKS G I ++ + DALRY+ + + Sbjct: 317 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFIMARTYLDAGLEPDALRYYFAAKSSGD 376 Query: 337 KDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 D + RVNADL + NL SR S I ++G + A T D Sbjct: 377 VDDLDLNLSDFVARVNADLVGKLVNLASRCASFIGTRFNGQL----ADTLPDRIQYDQFV 432 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 L IR+ + A+ Q + L E ++Y D KPW + K + + + + V + + Sbjct: 433 AALTPIRDAYERNDTASAIRQTMQLADEANKYIDETKPWIIAKQH-NADAQLHAVCTQGL 491 Query: 456 RQLAILLQAFVPKLAN-KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 +L+ A P L + I F+A +Q ++Q L G +H + P+F R Sbjct: 492 NLFRVLITALKPILPHTSIQAETFLAAPVTAWQDVNQPLIGGHTIHP-YSPLFTR 545 >gi|325967829|ref|YP_004244021.1| methionyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28] gi|323707032|gb|ADY00519.1| methionyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28] Length = 584 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 130/513 (25%), Positives = 230/513 (44%), Gaps = 47/513 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + I +A Y A PH+G+ ++ ADV R+ RL G DV+F +G+DEHG I A Sbjct: 14 RRRWVIGSAWPYIYAVPHLGNLIGSVLSADVFVRYLRLKGDDVVFVSGSDEHGTPIEVEA 73 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+ + D+ + + + +I +D++ RT H + R + K+ + I+ Sbjct: 74 LQLGIRPRELTDRMHEIIKKLFEFWEIGFDNYTRTESPVHREFVREFFMKLYNNSYIFTK 133 Query: 123 CYSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHN---------------------P 156 Y +D+ Y D + Y G D + N P Sbjct: 134 EDEVPYCPKDKIYLPDRFIIGTCPYCGYDKARGDQCENCGRLLEPKLLINPRCAICGSKP 193 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + W+ ++ L+ +D++ Y E + LP + + +K GLK +++R W Sbjct: 194 I-WVRTAHWYLDLTRLEDRVKKYVEENTA--LPENAKQMSLGMLKEGLKPRAITRDN-KW 249 Query: 217 GIK--IPDDPQYIMYVWIDALTNYLTTT-GYL---DNPDGSKAKFWPADLHVI---GKDI 267 GI+ P +YVW +A+ Y++ T Y N D K ++ + V+ GKD Sbjct: 250 GIEAPFPGADNKTIYVWFEAVLGYISATIEYFRNRGNEDEWKRYWFDPNTRVVFFVGKDN 309 Query: 268 LRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVD 323 + FH I PA L+++ P +P S ++L +G+K SKS +G ID E + + VD Sbjct: 310 IPFHVILLPAMLIASGDPYVMPYTTASTEYLLFEGKKFSKSQRIGIWID--EALALMPVD 367 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 R+ L+ + KD + +N+ L + IGN + R ++ I ++G IP+ G+ Sbjct: 368 YWRFVLIYQRPESKDTSFAWHQTLDVINSILNDIIGNFIHRVLTFISTRFNGEIPS-GSL 426 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 + D + + + AL + I + +RY + ++PWEL K N D Sbjct: 427 RDIDIKYRDEALDHFKNSEGYYEKIELRDALLEAIEIARVGNRYLNERQPWELIKGNKDE 486 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 A V+ + +++ L+I L +PK ++ + Sbjct: 487 AGAVILNALHIVKILSIDLWPIMPKSMESLWTM 519 >gi|119899492|ref|YP_934705.1| methionyl-tRNA synthetase [Azoarcus sp. BH72] gi|187645705|sp|A1KAG3|SYM_AZOSB RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|119671905|emb|CAL95819.1| MetG protein [Azoarcus sp. BH72] Length = 723 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 134/518 (25%), Positives = 215/518 (41%), Gaps = 55/518 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I D+ RF R+ G V + D HG I A+ Sbjct: 4 KILVTNALPYANGDIHLGHLVGYIQGDIWVRFQRMRGNSVHYVCADDTHGTPIMLRAEKE 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + +D+ + + RD D + +D + T + ++ K+ G I Sbjct: 64 GITPEQLIDRVHGEHLRDFTD-FGVGFDHYHSTHSAENRAYAEEIYGKLLGAGFIETRSI 122 Query: 125 SGWYSLRDEAYYND----DEVYKGADGQYYN-------AQHNPVQWME------------ 161 +Y E + D E K G Y A + P + Sbjct: 123 EQFYDPVKEMFLPDRFIKGECPKCGAGDQYGDNCEVCGAAYAPTELKNPYSAVSGAKPVL 182 Query: 162 --EEGYFFRLS-----AYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210 E YFFRLS + + E L E N++ ++ ++ L D +S Sbjct: 183 RTSEHYFFRLSDPRAVEFLRDWTRGTNAGGERRLQAEAANKMKEWLGEAGENKLSDWDIS 242 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTT----------TGYLDNPDGSKAKFWPADL 260 R +G +IP P YVW+DA YL + D D ++A+ +L Sbjct: 243 RDAPYFGFEIPGAPGKYFYVWLDAPIGYLASFRHYAERRGDIAVADYTDAARAESHGTEL 302 Query: 261 -HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIE 318 H IGKDIL FHA++WPA L A P ++ +GF+ G K+SKS G I +++ Sbjct: 303 VHFIGKDILYFHALFWPAMLKFAGYRTPTQLCVNGFLTVDGAKMSKSRGTFITARSYIVQ 362 Query: 319 EVGVDALR-YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 + + LR YF + +D + D + +VN+DL N+ SR I K +DG + Sbjct: 363 GLNPEWLRYYFASKSNGTMEDVDLNLDDMIAKVNSDLVGKYVNIASRCAGFIAKRFDGKL 422 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 +D +++ Q E RAL +++ L ++Y + KPWEL Sbjct: 423 GASDPKATADFESAYESAQIAQAYDERDYG----RALREIMRLADLANQYVNDHKPWELA 478 Query: 438 KTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKI 473 K + A V + + R L + L+ +P LA K+ Sbjct: 479 KQDGQDAQLHVVCSTALTLFRDLTLYLKPVLPGLAAKV 516 >gi|15789599|ref|NP_279423.1| methionyl-tRNA synthetase [Halobacterium sp. NRC-1] gi|169235311|ref|YP_001688511.1| methionyl-tRNA synthetase [Halobacterium salinarum R1] gi|25009397|sp|Q9HSA4|SYM_HALSA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|10579953|gb|AAG18903.1| methionine-tRNA synthetase [Halobacterium sp. NRC-1] gi|167726377|emb|CAP13158.1| methionine--tRNA ligase [Halobacterium salinarum R1] Length = 689 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 118/506 (23%), Positives = 220/506 (43%), Gaps = 55/506 (10%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + YP HIGH + D +R R G + +F +GTD HG IA A AGV Sbjct: 14 VTCGLPYPTGDLHIGHLRTYVSGDAFSRALRKLGQETVFVSGTDMHGTPIAVQAIEAGVG 73 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + + D + +++D + T E+ + + R D +Y+ Y Sbjct: 74 PLDLGLERHEQYADTFEEFSVAFDTYGHTDEETNVELTREFVGAWEDNDHVYETEIQVAY 133 Query: 129 SLRDEAYYND----------------DEVYKGA---------DGQYYNAQHNPVQWMEEE 163 + + D DE +G + N ++ E Sbjct: 134 DPDADQWLPDRYVEGTCPYCGEHARGDECDEGCQRHLEPGEIEAPVSTITGNSAEYHERA 193 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIE----RRNEVISFVKSGLKDLSLSRKTFDWGIK 219 F RLS +Q+ L FI +E +N+ +++ GL+D ++R DWGI Sbjct: 194 HKFLRLSDFQEYLEG-------FINRMEGTNNAKNQPREWIEGGLEDFCITRD-LDWGID 245 Query: 220 IPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--------LHVIGKDILR 269 P + ++YVW+DA Y+ T G++ W + +HVIG+DI++ Sbjct: 246 YPGEGGDDLVLYVWVDAPIEYVAATKQYSERVGTEEFDWASVWKDGDGEIIHVIGRDIIQ 305 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328 H ++WP+ L A+ P+ V + GF+ G +S S I E ++ D LRY+ Sbjct: 306 HHTVFWPSMLAGADYAEPRAVCATGFVNIDGRGLSTSKNRAIWAAEYLDAGFHPDLLRYY 365 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L +D + +RVN +LA+ +GN R++ +++DG TP + +D+ Sbjct: 366 LATASGFERDVNFSWAEFAQRVNTELADAVGNFAYRALLFANRNFDG---TPQEVSLTDD 422 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 + + ++ + + + + + A + ++L + Y +PW L + + A+ V+ Sbjct: 423 -VETEIAQAMDDYEDALNEYDLRTAGERAVALARFGNEYIQHNEPWNL---DSEAAAPVM 478 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF 474 V++++ +A+LLQ F+P+ ++ Sbjct: 479 RDCVQLVKAVAVLLQPFLPEKTETLW 504 >gi|149174947|ref|ZP_01853571.1| methionyl-tRNA synthetase [Planctomyces maris DSM 8797] gi|148846284|gb|EDL60623.1| methionyl-tRNA synthetase [Planctomyces maris DSM 8797] Length = 681 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 125/516 (24%), Positives = 226/516 (43%), Gaps = 53/516 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +R ++ ++ A+ Y N HIGH E I D+ RF +L G F D HG I Sbjct: 1 MTQR-RILVTAALPYANGDIHIGHLVEYIQTDIWVRFQKLRGHACRFFCADDTHGTAIMI 59 Query: 61 AAQNAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ G + + + D ++ D A +I +D++ T +++ C +W+ + + Sbjct: 60 RARQEGRSEEALIADVQQKHITDFAG-FNIEFDNYGSTNSEQNRKLCYEIWEALRTADLV 118 Query: 120 YKGCYSGWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWMEE 162 + + + +++ + D D+ D G Y +P+ + Sbjct: 119 VEKEVTQLFDVQENTFLADRFVKGTCPKCKAPDQYGDNCDKCGSTYTPADLADPISTLSN 178 Query: 163 EG--------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS-----GLKDLSL 209 F R+ L+ + +S ++EV +++K L+D + Sbjct: 179 TTPELRTASHLFVRIEDLHGFLVEWTQSGEHL------QSEVANYLKGHFLGDPLRDWDI 232 Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-----HVIG 264 SR +G +IPD P YVW DA Y+ +T G W + H IG Sbjct: 233 SRPAPYFGFEIPDSPGNYWYVWFDAPIGYIASTLEWCEKHGEDFDQWWKNPETEVHHFIG 292 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324 KDI FH ++WPA L +A LP+KV HGF+ GEK+SKS G + + + Sbjct: 293 KDITYFHTLFWPAMLKTAGFNLPEKVHIHGFLTVDGEKMSKSKGTFVKAATYLNHLDPAC 352 Query: 325 LRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 LRY+ ++ D + D ++VN+DL + NL SRS + K G+ A+ Sbjct: 353 LRYYYASKLGPRLDDLDLNLDEFIQKVNSDLVGKVVNLASRSAKFVAK--TGL---SAAY 407 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 E D + + + I + + A+ ++++L ++++D +KPWE+KK + Sbjct: 408 PE-DGGLFAHAASRSDAIAAAYEACDYNGAMREILALADRANKFWDDKKPWEVKKDGSRQ 466 Query: 444 AST--VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A + +++ + +Q+ I L +P+L+ + +L Sbjct: 467 AELQDICTISLNLYQQIVIYLTPVLPQLSEQTGALL 502 >gi|254294466|ref|YP_003060489.1| methionyl-tRNA synthetase [Hirschia baltica ATCC 49814] gi|254042997|gb|ACT59792.1| methionyl-tRNA synthetase [Hirschia baltica ATCC 49814] Length = 570 Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 126/530 (23%), Positives = 228/530 (43%), Gaps = 53/530 (10%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++A+ Y N H+G+ A M+ ADV ARF RL G DVL+ TDEHG AA Sbjct: 3 RILITSALPYINGVKHLGNLAGSMLPADVYARFKRLKGDDVLYVCATDEHGTPAELAASA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG++ + + D+ R + +S+D F R++ +++ + +K+ G I + Sbjct: 63 AGISVQEYCDEQHEIQRAAGEGFGLSFDWFGRSSREQNAKLTQHFAEKLEANGLIEERTS 122 Query: 125 SGWYSLRDEAYYNDD---------EVYKGADGQYYNAQH--NPVQWMEEEG--------- 164 YS+ D + D E K Q N +PV +E Sbjct: 123 KQVYSVDDGRFLPDRYVEGTCPHCEFEKARGDQCDNCGRLLDPVDLIEPYSAVSGSKNIE 182 Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 F QD + ++ + + P R+ ++ GL+D +++R WG+ Sbjct: 183 IRDTVHLFLLQEKMQDTIRAWVDEAETW--PQLARSIAYKWLDEGLQDRAITRD-LKWGV 239 Query: 219 KIPDD----PQY---IMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPAD-------- 259 + D P + + YVW DA Y+ T DN D +W D Sbjct: 240 PVLKDGKPRPGFEDKVFYVWFDAPVEYIAATQEWAEAGDNRDWES--WWRTDKGADDVSY 297 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVI 317 + +GKD + FH + +P + + P K+ + ++ G K S S + + + Sbjct: 298 VQFMGKDNVAFHTVSFPVTIFGSQEPWKTVDKLKAFNWVTWYGGKFSTSQKRGVFMDQAL 357 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 + D R++L+ G D + +G + +N+DLAN +GN V+R + +DG++ Sbjct: 358 GILPSDYWRWYLIANAPEGSDAPFTWEGFQSAINSDLANVLGNFVNRITKYTVSKFDGVL 417 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G E + + L + + +N +A A+ ++ + + Y +PW Sbjct: 418 PDGGVAGEDEAWLEGELKTRLPILMSHYENMEFRKAAAETRAIWAVGNEYLTKAEPWVKF 477 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487 KT+ D A+ + + ++ IL +P+ KI D + + +E+R F+ Sbjct: 478 KTDKDAAAVGVRYGLNLVALFGILALPIIPETGKKILDAIGIPEEHRSFK 527 >gi|304321411|ref|YP_003855054.1| methionyl-tRNA synthetase [Parvularcula bermudensis HTCC2503] gi|303300313|gb|ADM09912.1| methionyl-tRNA synthetase [Parvularcula bermudensis HTCC2503] Length = 575 Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 119/511 (23%), Positives = 221/511 (43%), Gaps = 44/511 (8%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ +++A+ Y N H+G+ M+ ADV ARF R G +V F TDEHG AA+ Sbjct: 3 RILVTSALPYINGVKHLGNLVGSMLPADVYARFMRARGHNVAFLCATDEHGTPAELAARK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + +A +S+D F R++ +H+ R ++ +G + + Sbjct: 63 AGQPVAEYCAAQHETQASLAAAFGLSFDHFGRSSSPTNHELTRHFADRLEAEGYLEERVS 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYN------------------AQHNPVQ 158 YS D + D V ++ A G + + V+ Sbjct: 123 QQVYSNADARFLPDRYVEGTCPNCGFEKARGDQCDNCGKLLDPTDLIDPYSAISGSKDVE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + + S + ++ ++ ++H ++ P+ R+ ++ GL+D S++R DWGI Sbjct: 183 MRDTRHLYLLQSKLEGEVRAWVDTHKDW--PLLTRSIAYKWIDEGLRDRSITRD-LDWGI 239 Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--------LHVIGKDIL 268 + D + YVW DA Y+ T D P+G ++ +W D + +GKD + Sbjct: 240 PVRRDGFEGKVFYVWFDAPIEYIAATKEWD-PEGWES-WWRTDQGADEVTYVQFMGKDNV 297 Query: 269 RFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 FH +++P L+ + P + + S ++ G K S S G I + I+ + D R Sbjct: 298 AFHTVFFPCTLIGSREPWKRVDHLKSLNWLTWYGGKFSTSEGRGIFMDQAIDLMPADTWR 357 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 ++L+ D + VN DLA+ +GNLV+R ++G +P G E+ Sbjct: 358 WYLMANAPESDDTAFTLQSFAGAVNKDLADVLGNLVNRVTRFTASKFEGQVPPGGEPGEA 417 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 ++++ + ++ +A A + L + + Y PW KT+PD A+ Sbjct: 418 EQTLYREVDDRCAALTGALEAMEFRKAFAALRGLWAAGNEYLQVTAPWTAFKTDPDAAAV 477 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + +I +A + +P+ A+KI I Sbjct: 478 SVRTALNLIMLIAEVSAPVIPETADKILGIF 508 >gi|301166247|emb|CBW25822.1| putative methionyl-tRNA synthetase [Bacteriovorax marinus SJ] Length = 569 Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 129/514 (25%), Positives = 236/514 (45%), Gaps = 45/514 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M+E++ L I+ A+ Y N H GH A + +DV R +L G LF +G+DEHG I Sbjct: 1 MQEKKYL-ITAALPYANGPIHFGHMAGAYLSSDVYNRHRKLQGHKTLFISGSDEHGVAIM 59 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ + +V++ R ++ I +D F +T+ H + +K + +KG I Sbjct: 60 LNAKKVSEPYQEYVNKWHREHSELFKDFGIGFDFFGQTSADYHKEEVIKWFKVLHEKGYI 119 Query: 120 YKG------CYSGWYSLRDE-----AYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168 C L D Y D E +G + +PV+ + Sbjct: 120 EPKDSQQLYCNDCHNHLPDRFVEGTCYKCDYEHARGDECPNCGEFIDPVKLTNT---VCK 176 Query: 169 LSAYQD----KLLSYY----ESHPEFILPIERRNE---------VISFVKSGLKDLSLSR 211 + A Q+ + YY + HPE+ +E +++ V S K L D +++R Sbjct: 177 ICASQNISEVTVTQYYICLSKYHPEYRKWLETKSDEWRKTVYPYVDSLTKENLHDRAITR 236 Query: 212 KTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK---AKFWPAD----LH 261 DWGI +P + +YVW DA Y++ T YL+ + S+ +W +D H Sbjct: 237 D-IDWGIDVPLPNTEGKKLYVWFDAPIGYVSNTKKYLEQVESSEDYINDWWNSDDVELTH 295 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 IGKD + FH + +P +++ + P +V ++ F+ +G++ SKS G+ +D + + + Sbjct: 296 FIGKDNIIFHTVIFPTMSMASGICKPANQVPANQFLNLEGKQFSKSTGHYVDAAKAVAKF 355 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 G +ALRY+L+ + D + + L+ +VN +LAN IGN ++R + K+++ +P Sbjct: 356 GQNALRYYLLSILPEQTDSSFSWEQLQAKVNNELANNIGNFLNRCLKFTQKNWNEGMPAK 415 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 + S S ++ + E + I + + +V+ + + +F PW K + Sbjct: 416 YYEGFTGSSACESLSADIKALNELVDGYNIKKGIEKVMFIGQSANNFFSDNAPWAQIKED 475 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 D A L + L ++++ F+P L++ I Sbjct: 476 KDLAGKTLAHSSIYALCLGVIMKPFLPALSDSIL 509 >gi|259416472|ref|ZP_05740392.1| methionyl-tRNA synthetase [Silicibacter sp. TrichCH4B] gi|259347911|gb|EEW59688.1| methionyl-tRNA synthetase [Silicibacter sp. TrichCH4B] Length = 573 Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 118/526 (22%), Positives = 229/526 (43%), Gaps = 49/526 (9%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++A+ Y N H+G+ + AD+ AR++R G +V+F TDEHG AA Sbjct: 3 RILITSALPYINGIKHLGNLVGSQLPADLYARYNRGRGNEVMFLCATDEHGTPAELAAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + + D+A +S+D + R++ ++H + K+ + G I + Sbjct: 63 AGKPVADYCAEMHEVQADIAKRFGLSFDHYGRSSSPQNHALTQHFAGKLEEAGLITEVSE 122 Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM------------- 160 YS D + D E +G + Q +P + Sbjct: 123 KQVYSNADGRFLPDRYIEGTCPNCGFEKARGDQCEECTKQLDPTDLINPRSAISGSTDLE 182 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E + F R S+ +D+L + +S ++ + + GL+D ++R DWGI Sbjct: 183 VRETKHLFLRQSSMRDQLDQWIDSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGI 241 Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD-------- 259 + P + YVW DA Y+ G G ++W D Sbjct: 242 AVKKGTEDWPGMEGKVFYVWFDAPIEYIAAAGEWAEAHGKSDADWERWWRTDKGADDVKY 301 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 + +GKD + FH + +PA LL + P + + S ++ + G + S S G + + + Sbjct: 302 VQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVFMDQAL 361 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E + D R++L+ D + + ++ VN DLA+ +GN VSR + + Sbjct: 362 EILPSDYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSKFGEQV 421 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P GA+ E +++++ S + +M+ + ++ ++ ++ + Y + PW + Sbjct: 422 PEGGAWGEQEQALIEELSTRIGAYERHMEAMEVRKSAQELRAIWVAGNEYLQSAAPWSVF 481 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 K +P+RA+ + + + +IR A+L F+P ++++F+ L D + Sbjct: 482 KEDPERAAGQVRLGLNLIRLYAVLSAPFIPDASDRLFEALGSEDRD 527 >gi|71900625|ref|ZP_00682751.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta subunit, C-terminal [Xylella fastidiosa Ann-1] gi|71729619|gb|EAO31724.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta subunit, C-terminal [Xylella fastidiosa Ann-1] Length = 702 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 139/536 (25%), Positives = 226/536 (42%), Gaps = 43/536 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G + F D HG I AA+ AG+ Sbjct: 18 VTTALPYANGPLHLGHLVGYIQADIWVRARRLGGHNTWFVCADDTHGTPIMLAAEKAGMP 77 Query: 69 TKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A ++++D + T + + + G I + + Sbjct: 78 PEAFIATTQASHERDFA-AFNVAFDHYDSTHSPVNRHLTEQSYLTLKQAGHITCRSVAQF 136 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQW-------------MEEE 163 Y + D V GA QY A ++P + + + Sbjct: 137 YDPAKGMFLPDRYVKGTCPNCGATDQYGDNCEACGATYDPTELKNPYSVISGATPELRDS 196 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 +FF A+ D L ++ S + ++ + + K GL+ +SR +G +IPD Sbjct: 197 EHFFFEVAHFDTFLRHWLSGDVALPSVKNKLKEWLDAKGGLRPWDISRDAPYFGFEIPDQ 256 Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYWPA 277 P YVW+DA YL + L G ++ H IGKDI+ FHA++WPA Sbjct: 257 PGKYFYVWLDAPIGYLCSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWPA 316 Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACG 336 L P ++ +G++ G K+SKS G I ++ + DALRY+ + + Sbjct: 317 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFIMARTYLDAGLEPDALRYYFAAKSSGD 376 Query: 337 KDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 D + RVNADL + NL SR S I ++G + A T D Sbjct: 377 IDDLDLNLSDFVARVNADLVGKLVNLASRCASFIGTRFNGQL----ADTLPDHIQYDRFV 432 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY-VTVEV 454 L IR+ + A+ Q + L E ++Y D KPW + K + A L+ V + Sbjct: 433 AALTPIRDAYERNDTASAIRQTMQLADEANKYIDETKPWIIAKQH--HADAQLHAVCTQG 490 Query: 455 IRQLAILLQAFVPKLAN-KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 + +L+ A P L + I F+A +Q ++Q L G + + + P+F R Sbjct: 491 LNLFRVLITALKPILPHTSIQAETFLAAPVTAWQDVNQPLTGGHTI-QPYSPLFTR 545 >gi|146278384|ref|YP_001168543.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025] gi|187647761|sp|A4WV24|SYM_RHOS5 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|145556625|gb|ABP71238.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025] Length = 572 Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 117/524 (22%), Positives = 227/524 (43%), Gaps = 49/524 (9%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++AI Y N H+G+ + AD+ AR+ R G +V+F TDEHG AA Sbjct: 3 RILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG +V+ + +++A +S+D F R++ R+H + ++++ G I + Sbjct: 63 AGKPVEVYCAEMHEIQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGQLAENGFIEEVSE 122 Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160 +S+ D + D + +G + Q +P + Sbjct: 123 RQVFSVADNRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLINPRSAISGSTDLE 182 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E + + R A +D++ ++ +S ++ + + GL+D ++R WG+ Sbjct: 183 VRETKHLYLRQRALKDEIEAWIDSKTDWPVLTTSIAKKWLHDGEGLQDRGITRD-LHWGV 241 Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPAD-------- 259 + P + YVW DA Y+ T + +G ++W D Sbjct: 242 PVKKGDQPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKTEADWERWWRTDKGAGDVRY 301 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 + +GKD + FH + +PA ++ + P L + S ++ + G + S S G + + + Sbjct: 302 VQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 361 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 + D R++L+ D + + + VN DLA+ +GNLVSR + + Sbjct: 362 SILPADYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNLVSRVTKFCRSKFGETV 421 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P GAF E + +++ L M+ I +A ++ +L + Y + PW + Sbjct: 422 PAGGAFGEREHQLIAELQERLAAYESCMEAMEIRKAATELRALWVAGNEYLQSAAPWTVV 481 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 KT+P+RA ++ +++ +IR A++ + F+P A L D Sbjct: 482 KTDPERAQAMIRLSLNLIRLYAVISRPFIPDAAASTMASLGCDD 525 >gi|126650518|ref|ZP_01722741.1| methionyl-tRNA synthetase [Bacillus sp. B14905] gi|126592674|gb|EAZ86673.1| methionyl-tRNA synthetase [Bacillus sp. B14905] Length = 544 Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 122/506 (24%), Positives = 218/506 (43%), Gaps = 39/506 (7%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + I A Y N H+GH ++ D+LAR++R G VL+ +G+D +G I+ A Sbjct: 3 IVIGGAWPYANGSLHLGHVAALLPGDILARYYRQKGEQVLYVSGSDCNGTPISIRAAQEN 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 TT+ + F + L +YD + RT + HH++ + L+ ++ +YK Sbjct: 63 TTTEAIANHYHEEFTKCFNELGFTYDLYTRTDAEHHHESVKGLFLQLLANNFLYKKKIEQ 122 Query: 127 WYSLRDEAYYNDDEV--------YKGADGQYYNAQH--NPVQWM--------------EE 162 Y D+ + D V K Q N +P+ + E Sbjct: 123 AYCEADQQFLPDRFVEGICPNCGAKARGDQCDNCSEILDPLDLIDKCCKICGNEPVIRET 182 Query: 163 EGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 E ++F S +Q +L ++ E+ E ++ G+ D +++R + GI +P Sbjct: 183 EHFYFTFSQFQGRLETFLSEAKAEKRWRDNALGLTERYLAEGVPDRAVTRDLPN-GIDVP 241 Query: 222 DDPQY---IMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPADL---HVIGKDILRFHAIY 274 P + +YVWI+A+ YLT + + + W + +V GKD + FH + Sbjct: 242 V-PGFEGKKIYVWIEAVAGYLTASLEWAKQHHMAIEDLWNEETISYYVHGKDNIPFHTVI 300 Query: 275 WPAFLLSANL-PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 WPA L+ LP + S+ ++ + K+S SL + ++ D++RYFL Sbjct: 301 WPAILMGLGAKALPTHIVSNEYLTLEKRKLSTSLNWAVWVPYILSRYDADSIRYFLTTNA 360 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 +D + N +L GN V+R++ I K + +P E D +I Sbjct: 361 PENRDTDFSWREFIYSHNGELLGAYGNFVNRTLKFIEKSFANQVPQ----AEVDSTIRKQ 416 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 ++ E+ ++ +AL + + +RYFD Q+PW K + + + L V Sbjct: 417 TIQLFNEVGILIEGGHFKQALESIFEYIRGANRYFDEQQPWLQVKEHVEAGNCTLATCVY 476 Query: 454 VIRQLAILLQAFVPKLANKIFDILFV 479 +I L LL F+P A K+ ++L + Sbjct: 477 IIANLGQLLHPFLPFSAEKVRNMLGI 502 >gi|99038317|gb|ABF64929.1| methionyl-tRNA synthetase [Ruegeria sp. TM1040] Length = 576 Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 119/531 (22%), Positives = 229/531 (43%), Gaps = 49/531 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M + ++ I++A+ Y N H+G+ + AD+ AR++R G +V+F TDEHG Sbjct: 1 MDDMARILITSALPYINGIKHLGNLVGSQLPADLYARYNRGRGHEVMFLCATDEHGTPAE 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AA AG + + D+A +S+D + R++ ++H + K+ + G I Sbjct: 61 LAAAKAGKPVADYCAEMHAVQADIAKRFGLSFDHYGRSSSPQNHALTQHFAGKLEEAGLI 120 Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160 + YS D + D E +G + Q +P + Sbjct: 121 TEVSEKQVYSNADGRFLPDRYIEGTCPNCGFEKARGDQCEECTKQLDPTDLINPRSAISG 180 Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 E + F R SA +D+L + +S ++ + + GL+D ++R Sbjct: 181 STDLEVRETKHLFLRQSAMRDQLDQWIDSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD- 239 Query: 214 FDWGIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD--- 259 DWGI + P + YVW DA Y+ G G ++W D Sbjct: 240 LDWGIAVKKGDADWPGMEGKVFYVWFDAPIEYIAAAGEWAEAHGKTDADWERWWRTDKGA 299 Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVID 312 + +GKD + FH + +PA LL + P + + S ++ + G + S S G + Sbjct: 300 DDVKYVQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVF 359 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 + +E + D R++L+ D + + ++ VN DLA+ +GN VSR Sbjct: 360 MDQALEILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSK 419 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 + +P G + E +++++ S + +M+ + ++ ++ ++ + Y + Sbjct: 420 FGEEVPDGGTWGEQEQTLIEELSTRIGAFERHMEAMEVRKSAQELRAIWVAGNEYLQSAA 479 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 PW + K +P+RA+ + + + +IR A+L F+P ++++F L D + Sbjct: 480 PWSVFKEDPERAAGQVRLGLNLIRLYAVLSAPFIPDASDRLFAALGTEDRS 530 >gi|238793464|ref|ZP_04637089.1| Methionyl-tRNA synthetase [Yersinia intermedia ATCC 29909] gi|238727237|gb|EEQ18766.1| Methionyl-tRNA synthetase [Yersinia intermedia ATCC 29909] Length = 635 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 119/469 (25%), Positives = 206/469 (43%), Gaps = 44/469 (9%) Query: 40 LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99 + G V F D HG I AQ G+ + + + S+ + ISYD++ T Sbjct: 1 MRGNQVHFICADDAHGTPIMLKAQQLGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHS 60 Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY---- 149 + + +++ ++ G I S Y ++ + D KG A QY Sbjct: 61 DENRELSSLIYSRLKANGYIKNRTISQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNC 119 Query: 150 --YNAQHNPVQWM--------------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193 A ++P + + E E +FF L A+ D L ++ S L + Sbjct: 120 EVCGATYSPTELIDPKSAVSGATPVMRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVA 176 Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253 N++ + +SGL+ ++R +G ++PD P YVW+DA Y+ + L + G Sbjct: 177 NKMQEWFESGLQQWDITRDAPYFGFEVPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLD 236 Query: 254 --KFW----PADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 +FW DL H IGKDI+ FH+++WPA L +N P +F HG++ G K+SKS Sbjct: 237 FDEFWREGSETDLYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNIFVHGYVTVNGAKMSKS 296 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRS 365 G I ++ D LRY+ +++ D + + +RVN D+ N + NL SR+ Sbjct: 297 RGTFIKASTYLQHFDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNTDIVNKVVNLASRN 356 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 I K + G + A +D ++ + I + ++ +A+ ++++L + Sbjct: 357 AGFINKRFGGKL----ADKLADPALYKTFTDAAVSIADAYNSRESGKAIREIMALADIAN 412 Query: 426 RYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 RY D Q PW + K A V + + + R L L+ +P L + Sbjct: 413 RYVDEQAPWVIAKEEGRDADLQAVCSLGINLFRVLMTYLKPVLPSLTER 461 >gi|153005309|ref|YP_001379634.1| methionyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] gi|152028882|gb|ABS26650.1| methionyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] Length = 694 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 137/517 (26%), Positives = 217/517 (41%), Gaps = 63/517 (12%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E+L +++A+ Y N H+GH E I DV R+ R G V + D HG I A Sbjct: 3 ERLLVTSALPYANGSIHLGHLVEYIQTDVYVRYRRACGDHVTYVCAADSHGTPIEVNAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG+T K FV++ D + + + T + ++ + KG IYK Sbjct: 63 AGMTPKAFVEKYRGEQHDDFRRFGVEFSTYYTTDSPENARWAYRIYDALKAKGLIYKRSI 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQYYN---------------------AQHNPVQ 158 Y D + D V GA QY + PV Sbjct: 123 EQLYCEHDRRFLPDRFVKGTCPKCGARDQYGDVCEVCGTTYDPRDLKDPRCAICGSAPVV 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216 + Y L ++ + + E+ E L R +V ++ + L+D ++R F + Sbjct: 183 RSSDHAYV-DLKKAEEVIRGWVEA--EGHLEPAVREQVKGWL-ADLQDWCITRDAPYFGF 238 Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPADL--------------H 261 +K PD P +YVW+DA YL++ Y + + PA+ H Sbjct: 239 PVKDPDFPGKFLYVWVDAPIGYLSSAEHYFAEEAPAGERLSPAEFERRYLAEGAGARLEH 298 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321 IGKDILRFHA++WPA L +A L P ++ HG + GEK+SK+ G+ I + + G Sbjct: 299 FIGKDILRFHAVFWPAMLWAAGLKRPDRMPVHGHLTVNGEKMSKTRGSFITARTYL-DAG 357 Query: 322 VDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 +D LRYF + +D D + RVNADLAN + NL SR + ++P Sbjct: 358 LDPELLRYFYAANLGPSVQDLDLALDEFRNRVNADLANNVANLASRVAA--------LVP 409 Query: 379 TPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWEL 436 GA E E L +R L +R + + + V++ ++ KPWE Sbjct: 410 RAGAPLAERPEPALVEVARSALAAARLAYRALEYREVVRAANQVADRCNKRMQEAKPWED 469 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + RA +L+ + +R +A +L +P+ + Sbjct: 470 PASPASRA--LLFSCAKSLRAIATILWPVMPRFCGDL 504 >gi|325981754|ref|YP_004294156.1| methionyl-tRNA synthetase [Nitrosomonas sp. AL212] gi|325531273|gb|ADZ25994.1| methionyl-tRNA synthetase [Nitrosomonas sp. AL212] Length = 701 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 139/522 (26%), Positives = 232/522 (44%), Gaps = 50/522 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ I++A+ Y N H+GH E I D+ RF ++ G +V + D HG I A+ Sbjct: 3 KRKILITSALPYANGSIHLGHLVEYIQTDIWVRFQKMRGHEVYYVCADDTHGTPIMLRAE 62 Query: 64 NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRT--TEKRHHDTCRILWKKISDKGDIY 120 G+T + + + +S + D + I +D++ T TE RH ++ K+ G I Sbjct: 63 KEGITPEALIARVHSEHLGDFSG-FHIQFDNYYSTHSTETRHFS--EDIYAKLKAAGLIA 119 Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQH------------NPVQWME-- 161 Y + D V GA QY ++ NP + Sbjct: 120 VRGIEQLYDPVKNMFLPDRFVKGECPKCGAKDQYGDSCEVCGAAYVPTELKNPYSAVSGA 179 Query: 162 ------EEGYFFRLSAYQD-KLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210 E YFF LS + L ++ + L +E N++ +V ++ L D +S Sbjct: 180 KPINKSSEHYFFSLSDPRCVDFLRHWACEGDH-LQLEAANKMREWVGEAGENKLSDWDIS 238 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIG 264 R +G +IPD P YVW+DA Y+ + L + + +FW A+L H IG Sbjct: 239 RDAPYFGFEIPDAPGKYFYVWLDAPVGYMGSFKNLCEREKIQFDEFWQPQSNAELYHFIG 298 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 KDIL FHA++WPA L +A P K+F+HGF+ GEK+SKS G I + + + + Sbjct: 299 KDILYFHALFWPAMLQNAGYRTPTKIFAHGFLTVNGEKMSKSRGTFITAESYLRQGLNPE 358 Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ ++ + +D + + RVN+DL N+ SR I K ++G + Sbjct: 359 WLRYYYAAKLNSTLEDIDLNLEDFVARVNSDLVGKFINIASRCAGFISKRFEGRLVDGAQ 418 Query: 383 FTESDESILSVCSRVLQEIREN-MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 + + + + E+ E+ + + A+ Q++ E + PWE+ K NP Sbjct: 419 YQILQQMVNERFAAWRPEVIEHAFEAREYSAAIRQIMKFADEANEMIHQLAPWEIAK-NP 477 Query: 442 DRA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 DR+ + V++ L+ L+ +P A +I L A Sbjct: 478 DRSDDLQRTCSLGVQLFYLLSRYLKPVLPATAQQIETFLNCA 519 >gi|282859895|ref|ZP_06268983.1| methionine--tRNA ligase [Prevotella bivia JCVIHMP010] gi|282587298|gb|EFB92515.1| methionine--tRNA ligase [Prevotella bivia JCVIHMP010] Length = 687 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 129/510 (25%), Positives = 230/510 (45%), Gaps = 51/510 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ ++ ++ A+ Y N HIGH A + +D+ R+ RL +V+F G+DEHG I Sbjct: 4 KKFKRTTVTAALPYANGGVHIGHLAGVYVPSDIYVRYLRLKKQEVVFIGGSDEHGVPITI 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A+ G+T + D+ +D IS+D + RTT H+ +KK+ ++G + Sbjct: 64 RAKKEGITPQDVCDRYHSMIKDSFKDFGISFDVYSRTTSDVHNKLASDFFKKLYEEGKLV 123 Query: 121 KGCYSGWYSLRDEAYYND----DEVYKGADGQYYNAQ-------------HNPVQWME-- 161 + Y + + D E + Y Q NP + Sbjct: 124 EKESEQLYDEEAKQFLADRYVMGECPHCGNPNAYGDQCEKCGSDLSPLELKNPRSTISGS 183 Query: 162 ------EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213 + ++ L+ YQ+ L + + H E+ R V KS L D+ L + Sbjct: 184 QPVLKNTKNWYLPLNDYQEWLKEWILKEHQEW------RPNVYGQCKSWL-DMDLQPRAM 236 Query: 214 ---FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYL--DNPD--GSKAKFWPAD----L 260 DWGI +P + ++YVW DA Y++ T L + P+ G+ K+W + Sbjct: 237 TRDLDWGIPVPIEGAEGKVLYVWFDAPIGYISNTKELCDNEPEKFGNWEKWWKDPETRLV 296 Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 H IGKD + FH I +P L + LP V S+ F+ + +KIS S + E + + Sbjct: 297 HFIGKDNIVFHCIIFPTMLKAHGGYILPDNVPSNEFLNLENDKISTSKNWAVWLHEYLVD 356 Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 D LRY L KD + ++R N++L GN V+R++ + K ++G++ Sbjct: 357 FPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYWNGVV 416 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G + D+ ++ V +++ + A + ++L +RY +PW++ Sbjct: 417 PACGELLDVDKQAIAEFQDVKEKVEAFLNVFKFREAQKEAMNLARIGNRYITECEPWKVW 476 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 KT+P R T+L ++++++ L+I + F+P Sbjct: 477 KTDPKRVETILNISLQLVANLSIAFEPFLP 506 >gi|161899027|ref|YP_614191.2| methionyl-tRNA synthetase [Ruegeria sp. TM1040] gi|187649779|sp|Q1GEI7|SYM_SILST RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS Length = 573 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 118/526 (22%), Positives = 227/526 (43%), Gaps = 49/526 (9%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++A+ Y N H+G+ + AD+ AR++R G +V+F TDEHG AA Sbjct: 3 RILITSALPYINGIKHLGNLVGSQLPADLYARYNRGRGHEVMFLCATDEHGTPAELAAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + + D+A +S+D + R++ ++H + K+ + G I + Sbjct: 63 AGKPVADYCAEMHAVQADIAKRFGLSFDHYGRSSSPQNHALTQHFAGKLEEAGLITEVSE 122 Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM------------- 160 YS D + D E +G + Q +P + Sbjct: 123 KQVYSNADGRFLPDRYIEGTCPNCGFEKARGDQCEECTKQLDPTDLINPRSAISGSTDLE 182 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E + F R SA +D+L + +S ++ + + GL+D ++R DWGI Sbjct: 183 VRETKHLFLRQSAMRDQLDQWIDSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGI 241 Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD-------- 259 + P + YVW DA Y+ G G ++W D Sbjct: 242 AVKKGDADWPGMEGKVFYVWFDAPIEYIAAAGEWAEAHGKTDADWERWWRTDKGADDVKY 301 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 + +GKD + FH + +PA LL + P + + S ++ + G + S S G + + + Sbjct: 302 VQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVFMDQAL 361 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E + D R++L+ D + + ++ VN DLA+ +GN VSR + + Sbjct: 362 EILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSKFGEEV 421 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G + E +++++ S + +M+ + ++ ++ ++ + Y + PW + Sbjct: 422 PDGGTWGEQEQTLIEELSTRIGAFERHMEAMEVRKSAQELRAIWVAGNEYLQSAAPWSVF 481 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 K +P+RA+ + + + +IR A+L F+P ++++F L D + Sbjct: 482 KEDPERAAGQVRLGLNLIRLYAVLSAPFIPDASDRLFAALGTEDRS 527 >gi|56696287|ref|YP_166644.1| methionyl-tRNA synthetase [Ruegeria pomeroyi DSS-3] gi|68565961|sp|Q5LTL1|SYM_SILPO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|56678024|gb|AAV94690.1| methionyl-tRNA synthetase [Ruegeria pomeroyi DSS-3] Length = 572 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 117/526 (22%), Positives = 229/526 (43%), Gaps = 49/526 (9%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++AI Y N H+G+ + AD+ AR+ R G +V+F TDEHG AA Sbjct: 3 RILITSAIPYINGIKHLGNLVGSQLPADLYARYQRGRGNEVMFLCATDEHGTPAELAAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + + D+A +S+D F R++ ++H + K+++ I + Sbjct: 63 AGKPVAEYCAEMHGVQADIARRFGLSFDHFGRSSSAQNHKLTQHFAGKLAENDLIREVSE 122 Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG--------- 164 YS D + D + +G + Q +P +E Sbjct: 123 RQVYSNADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIEPRSAISGSTDLE 182 Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + R SA +D+L ++ +S ++ + + GL+D ++R DWGI Sbjct: 183 VRETKHLYLRQSALKDQLDAWIDSKADWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGI 241 Query: 219 KIPDDPQ-------YIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD-------- 259 + Q + YVW DA Y+ G G ++W D Sbjct: 242 PVKKGEQDWPGMEGKVFYVWFDAPIEYIACAGEWAEAHGKSDAEWERWWRTDKGADDVRY 301 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 + +GKD + FH + +PA L+ + P + + S ++ + G + S S G + + + Sbjct: 302 VQFMGKDNVPFHTLSFPATLIGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVFMDQAL 361 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E + D R++L+ D + + + VN DLA+ +GN VSR + + Sbjct: 362 EILPADYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNFVSRITKFCRSKFGEEV 421 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P GA+ +E++++ + L+ +M+ + ++ ++ ++ + + Y + PW L Sbjct: 422 PEGGAYGPQEEALIAELTTRLRAYEGHMEAMEVRKSAQELRAIWAAGNEYLQSAAPWTLF 481 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 KT+P +A+ + + + +IR A+L F+P + ++ + + +D+N Sbjct: 482 KTDPVQAAAQVRLGLNLIRLYAVLSAPFIPAASARMLEAMQTSDDN 527 >gi|194324311|ref|ZP_03058085.1| methionyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] gi|194321758|gb|EDX19242.1| methionyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] Length = 652 Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 122/492 (24%), Positives = 222/492 (45%), Gaps = 48/492 (9%) Query: 29 IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNS-RNFRDMADVL 87 I +D+ RF +L G +F G+D HG I A++ G+T + V + S R+ +D D Sbjct: 5 IQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSLGITPEELVTKYSNRHLQDFTD-F 63 Query: 88 DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG--- 144 +I++D++ T + + ++ K+++K I K + Y + + D V KG Sbjct: 64 EINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAIAQAYDPEAKMFLPDRFV-KGTCP 122 Query: 145 ---ADGQY------YNAQHNPVQWME--------------EEGYFFRLSAYQDKLLSYYE 181 A+ QY A ++P + + E +FF L A + + + E Sbjct: 123 KCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPIQKNSEHFFFDLPALEKNIKDWIE 182 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-DDPQYIMYVWIDALTNYLT 240 S+ +L E N++ + + GL+ +SR +G IP + Q YVW+DA Y+ Sbjct: 183 SNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGFAIPGTNEQKFFYVWLDAPMGYIA 240 Query: 241 T-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294 + Y + + FW + H IGKDI+ FHA++WPA L S P VF++G Sbjct: 241 SFKDYCNRNEIDFDDFWGDNSESELYHFIGKDIIYFHALFWPAILSSTGYKTPTSVFANG 300 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNAD 353 F+ G+K+SKS G I ++ + LRY+ + D + + + N+D Sbjct: 301 FLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASRLTSRIDDIDLNLEEFVTKSNSD 360 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 + + N+ SR I K +D + + F D + S S+ I + + + A Sbjct: 361 IVGKVVNIASRCAGFIYKKFDATL-SGEIF---DPELESEFSKNHDAITQAFEKREFAHA 416 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL-- 469 + +++L + +++ D KPW+L K + V + + + L L+ +P + Sbjct: 417 VRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVCSQGINMFKVLIAYLKPIIPSIVA 476 Query: 470 -ANKIFDILFVA 480 A + +I F++ Sbjct: 477 EAERFLNIQFIS 488 >gi|147766455|emb|CAN73803.1| hypothetical protein VITISV_028905 [Vitis vinifera] Length = 652 Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 143/566 (25%), Positives = 255/566 (45%), Gaps = 73/566 (12%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV AR+ RL G +VL+ GTDE+G A Sbjct: 19 KRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVLYICGTDEYGTATETKA 78 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + + D+ + +++ D DIS+D+F RT+ +H + C+ ++KK+ + + + Sbjct: 79 MEENCSPQQICDKYHKIHKEVYDWFDISFDEFGRTSIPQHTEVCQAIFKKLMENNWLSEN 138 Query: 123 CYSGWYSLRDEAYYND----------DEVYKGADGQYYN------------------AQH 154 Y + + D D Y A G Q Sbjct: 139 RMQQLYCETCQRFLADRLVEGTCPTLDCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQS 198 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV---ISFVKSGLKDLSLSR 211 P Q + + F L +DKL Y + I +N + +++K GL+ ++R Sbjct: 199 TP-QIRDTDHLFLELPLLKDKLEEYINNMS--IAGCWSQNAIQATYAWLKEGLRSRCITR 255 Query: 212 KTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKD 266 WG+ +P + + YVW DA Y++ T P+ K P ++ +GKD Sbjct: 256 D-LKWGVPVPHEKYKDKVFYVWFDAPIGYVSITACY-TPEWEKWWKNPENVDLYQFMGKD 313 Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEE 319 + FH + +P+ L+ N L K + ++ ++ K SKS GN + ++ E Sbjct: 314 NVPFHTVMFPSTLIGTGENWTLMKSISVTEYLNYEAGKFSKSKGVGVFGNDVKDTKIPAE 373 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDG 375 V RY+L+ D + L+ ++N +L N +GN ++R +S I K Y Sbjct: 374 V----WRYYLLTNRPEVSDSLFTWVDLQAKLNTELLNNLGNFINRVLSFIAKAPGLGYGS 429 Query: 376 MIP-TPGAFTESDESILSVCSRV---LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 IP PGA ES ++ +V L++ E M+ + + L +S+ SE + Y Sbjct: 430 SIPDAPGA--ESHYLTKALAEKVGAYLEQYIEAMEKVKLKQGLKIGMSISSEGNGYLQES 487 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR---CFQS 488 + W+L K + S V+ +V ++ L+ LL+ F+P + ++ L + E R C ++ Sbjct: 488 QFWKLYKEDRASCSIVMRTSVGLVYLLSCLLEPFMPSFSLEVLKQLNLPPETRLSLCDEN 547 Query: 489 --LDQRLKPGFML---HK--TFDPIF 507 L++ KP +L HK T +P+F Sbjct: 548 GDLERARKPWELLPAGHKMGTPEPLF 573 >gi|76801248|ref|YP_326256.1| methionyl-tRNA synthetase [Natronomonas pharaonis DSM 2160] gi|121724492|sp|Q3IT47|SYM_NATPD RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|76557113|emb|CAI48687.1| methionine--tRNA ligase [Natronomonas pharaonis DSM 2160] Length = 698 Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 123/519 (23%), Positives = 218/519 (42%), Gaps = 63/519 (12%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N H+GH + D AR G V F +G+D HG IA A GV Sbjct: 13 VTCGLPYANGDLHVGHLRTYVSGDAYARALESLGQSVAFVSGSDMHGTPIAVNAAEEGVD 72 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-ISDKGDIYKGCYSGW 127 + F + + + +I +D++ T ++ + + R + I D + K W Sbjct: 73 PESFAVEYHEQYEETFPQFNIEFDNYGHTHDETNTEMTRSFVRSWIDDDHVVEKEIEVAW 132 Query: 128 YSLRDEAYYN---------------DDEVYKGA---------DGQYYNAQHNPVQWMEEE 163 + D+ + DE +G + NP ++ Sbjct: 133 DAEADQPLPDRFVEGTCPYCGEKARGDECDEGCQRHLEPGEIEAPVSTITGNPAEYRTRP 192 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIE----RRNEVISFVKSGLKDLSLSRKTFDWGIK 219 F RLS +Q+ L FI +E +N+ +++ L+DL ++R DWGI Sbjct: 193 HKFLRLSDFQEYLRG-------FIDRLEGTENAQNQPREWIEGELQDLCITRD-MDWGID 244 Query: 220 IPDD-----PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--------------- 259 P D ++YVW+DA Y+++T G W A Sbjct: 245 YPADGDESGEDLVLYVWVDAPIEYVSSTKQYSEQVGRDEYDWEAVWKNQVDGVPPEGGEI 304 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 +H+IG DI++ H ++WPA L A P+ V + GF+ G+ S S + + IE Sbjct: 305 VHIIGHDIIQHHTVFWPAMLRGAGFNEPRAVMACGFVNLDGDAFSTSRNRAVWADDYIES 364 Query: 320 -VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 + D RY ++ D + DGL++R N++L +GN + RS+ ++Y G Sbjct: 365 GLHPDLYRYHIITGSEFTADVDFSWDGLQERTNSELVGTLGNFLYRSLLFAERNYGG--- 421 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 TP A SDE + + + + R + + + + L + + Y +PW+L Sbjct: 422 TPDAAV-SDE-VRNEIEAAMADFRTAVNDYRVRGLGRAPVELATFGNEYIQRHEPWKLTD 479 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +P++A V+ V++ + +A+L + +P A ++D L Sbjct: 480 DDPEKARQVIRDCVQIAKAIAVLAEPVLPGKAAALWDQL 518 >gi|299538180|ref|ZP_07051465.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] gi|298726382|gb|EFI66972.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] Length = 544 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 124/513 (24%), Positives = 217/513 (42%), Gaps = 49/513 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + I A Y N H+GH ++ D+LAR++R G VL+ +G+D +G I+ A Sbjct: 3 IVIGGAWPYANGSLHLGHVAALLPGDILARYYRQKGEQVLYVSGSDCNGTPISIRAAQEN 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 TT+ + F L +YD + RT + HH++ + L+ ++ +YK Sbjct: 63 TTTEAIANHYHDEFTRCFHDLGFTYDLYTRTDAEHHHESVKTLFLQLLANNFLYKKKIEQ 122 Query: 127 WYSLRDEAYYNDDEV--------YKGADGQYYNAQH--NPVQWM--------------EE 162 Y D+ + D V K Q N +P+ + E Sbjct: 123 AYCETDKQFLPDRFVEGLCPNCGAKARGDQCDNCSEILDPLDLIDKRCKICGNEPVIRET 182 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERR------NEVISFVKSGLKDLSLSRKTFDW 216 E ++F S +Q +L SY +E+R ++ G+ D +++R + Sbjct: 183 EHFYFTFSQFQGRLESYLAQ-----AKVEKRWRDNALGLTERYLAEGVPDRAVTRDLPN- 236 Query: 217 GIKIPDDPQY---IMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPADL---HVIGKDILR 269 GI +P P + +YVWI+A+ YLT + + + W + +V GKD + Sbjct: 237 GIDVPV-PGFEGKKIYVWIEAVAGYLTASLKWAKEHQIAIEDLWNEETISYYVHGKDNIP 295 Query: 270 FHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH + WPA L+ + LP + S+ ++ + K+S S + ++ D++RYF Sbjct: 296 FHTVIWPAILMGIGSKALPTHIVSNEYLTLEKRKLSTSQNWAVWVPYILSRYDADSIRYF 355 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L +D + N +L GN V+R++ I K + +P E D Sbjct: 356 LTMNAPENRDTDFSWREFIYSHNGELLGAYGNFVNRTLKFIEKSFACQVPQ----AEVDS 411 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 I ++ E ++ +AL + + +RYFD Q+PW K N + + L Sbjct: 412 DIRKQTVQLFNEAGVLIEGGHFKQALESIFEYIRRANRYFDEQQPWLQVKENVEAGNRTL 471 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 V +I L LL F+P A K+ ++L + + Sbjct: 472 ATCVYIIANLGQLLHPFLPFSAKKVRNMLGINE 504 >gi|225433588|ref|XP_002269672.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 807 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 125/526 (23%), Positives = 233/526 (44%), Gaps = 45/526 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 ++ + + I++A+ Y N PH+G+ ++ ADV AR+ RL G + ++ GTDE+G Sbjct: 19 IQGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATE 78 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A T + D+ +++ +IS+D+F RT+ + + C+ ++KK+ + + Sbjct: 79 TKAMEEKCTPQQICDKYHAIHKEVYKWFNISFDEFGRTSSPQQTEVCQAIFKKLMENNWL 138 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 + Y + + + D V Q N E+ G +D + Sbjct: 139 SENVMQQLYCDKCQKFLADRLVEGICPTQDCNYDSARGDQCEKCGKLLNPIELKDPRCKF 198 Query: 180 YESHP----------EFILPIERRNEVI------------------SFVKSGLKDLSLSR 211 S P E L ++ E I +++K GLK ++R Sbjct: 199 CHSTPHIRDTNHLFLELPLLKDKLEEYINLMSVAGSWSQNAIQATHAWLKEGLKPRCITR 258 Query: 212 KTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKD 266 WG+ +P + + YVW DA Y++ T PD K P ++ + +GKD Sbjct: 259 D-LKWGVPVPHEKFKDKVFYVWFDAPIGYVSITSCY-TPDWEKWWKNPENVELYQFMGKD 316 Query: 267 ILRFHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVD 323 + FH + +P+ LL S N L K + ++ ++ K SKS G V + V+ Sbjct: 317 NVPFHTVMFPSTLLGTSENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDAKDTNIPVE 376 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP- 378 RY+L+ D + L+ ++N++L N +GN ++R +S I K Y +IP Sbjct: 377 VWRYYLLTNRPEVSDTLFTWVDLQAKLNSELLNNLGNFINRVLSFIAKPAGLGYGSVIPD 436 Query: 379 TPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 PGA + +++ R +++ E M+ + + L +S+ SE + Y + W+L Sbjct: 437 APGAELHQLTKTLAEKVGRFVEQYVEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLY 496 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 K + S V+ ++ ++ LA LL+ F+P + ++ L + E Sbjct: 497 KEDQPSCSIVVKTSLGLVHLLACLLEPFMPSFSLEVLKQLNMPPET 542 >gi|21242139|ref|NP_641721.1| methionyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] gi|25009359|sp|Q8PMP0|SYM_XANAC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|21107551|gb|AAM36257.1| methionyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] Length = 694 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 130/498 (26%), Positives = 210/498 (42%), Gaps = 46/498 (9%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G F D HG I AA+ AGVT Sbjct: 7 VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66 Query: 69 TKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + + RD A +++D + T + + + K+ G I + + + Sbjct: 67 PEAFIANVQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYAKLEAAGHISRRSVAQF 125 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162 Y + D + G+ QY A + P + E Sbjct: 126 YDTAKGMFLPDRYIKGICPNCGSPDQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 E +FF + + L + + LP ++ + + + GL+ +SR +G +IP Sbjct: 186 EHFFFEVGHFDGFLREWLAG--DVALPGVKAKLKEWLDAEGGLRAWDISRDAPYFGFQIP 243 Query: 222 DDPQYIMYVWIDALTNYLTTTGYL-----DNPDGSKAKFWPADL-HVIGKDILRFHAIYW 275 P YVW+DA YL + L +N + +L H IGKDI+ FH ++W Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGENFEAHLVAGTQTELHHFIGKDIVNFHGLFW 303 Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREI 333 PA L P ++ +G++ G K+SKS G + +VG+ +ALRY+ + Sbjct: 304 PAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKS 362 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 + G D + RVNADL NL SR I K +DG + A D + Sbjct: 363 SGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----ADALPDAAQYD 418 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450 L IRE + A+ Q ++L E ++Y D KPW + K + A +V Sbjct: 419 RFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCTQ 478 Query: 451 TVEVIRQLAILLQAFVPK 468 + + R L L+ +P+ Sbjct: 479 GLNLFRILVAALKPILPR 496 >gi|84683791|ref|ZP_01011694.1| methionyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84668534|gb|EAQ15001.1| methionyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654] Length = 585 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 115/526 (21%), Positives = 228/526 (43%), Gaps = 49/526 (9%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++A+ Y N H+G+ + AD+ AR+ R G +V+F TDEHG AA Sbjct: 16 RVLITSALPYINGIKHLGNLVGSQLPADLYARYMRARGHEVMFICATDEHGTPAELAAAM 75 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G + + ++A +S+D + R++ +R+H + L K+++ G I + Sbjct: 76 TGEAVADYCARMHDVQAELAKGFRLSFDHYGRSSSQRNHALTQHLAGKLAENGYIEEVSE 135 Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG--------- 164 YS D + D + +G + Q +PV +E Sbjct: 136 EQVYSNADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPVDLIEPRSAISGSTDLE 195 Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 F + SA +D++ ++ + ++ + + GL+D ++R DWGI Sbjct: 196 VRQTKHLFLKQSAMKDEIDAWIDQKTDWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGI 254 Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPAD-------- 259 + P + YVW DA Y+ T + G ++W D Sbjct: 255 PVKKGTEDWPGMEGKVFYVWFDAPIEYIAATAEWADATGRSESDWERWWRTDKGADDVRY 314 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 + +GKD + FH + +PA ++ + P L + S ++ + G + S S G + + + Sbjct: 315 VQFMGKDNVPFHTLGFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 374 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E + D R++L+ D + + + +N DLAN +GN VSR + + Sbjct: 375 EILPADYWRWWLLSHAPENSDAEFTWENFQSSINTDLANVLGNFVSRVTKFCASKFGEAV 434 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G E++ ++++ + ++ + M+ + +A ++ ++ + + Y PW + Sbjct: 435 PEGGELGEAERALIADLTARIRSYEKQMEAMEVRKAAQELRAIWAVGNEYLQTAAPWTVF 494 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 KT+PD+A ++ + + +IR A++ FVP A K+ + D + Sbjct: 495 KTDPDQAGAIIRLMLNLIRVYAVISAPFVPDAAAKMLSGMNTLDTD 540 >gi|71274586|ref|ZP_00650874.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta subunit, C-terminal [Xylella fastidiosa Dixon] gi|71898125|ref|ZP_00680311.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta subunit, C-terminal [Xylella fastidiosa Ann-1] gi|170730848|ref|YP_001776281.1| methionyl-tRNA synthetase [Xylella fastidiosa M12] gi|226710941|sp|B0U472|SYM_XYLFM RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|71164318|gb|EAO14032.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta subunit, C-terminal [Xylella fastidiosa Dixon] gi|71732099|gb|EAO34155.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta subunit, C-terminal [Xylella fastidiosa Ann-1] gi|167965641|gb|ACA12651.1| methionyl-tRNA synthetase [Xylella fastidiosa M12] Length = 702 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 138/536 (25%), Positives = 225/536 (41%), Gaps = 43/536 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G + F D HG I AA+ AG+ Sbjct: 18 VTTALPYANGPLHLGHLVGYIQADIWVRARRLGGHNTWFVCADDTHGTPIMLAAEKAGMP 77 Query: 69 TKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A ++++D + T + + + G I + + Sbjct: 78 PEAFIATTQASHERDFA-AFNVAFDHYDSTHSPVNRHLTEQSYLTLKQAGHITCRSVAQF 136 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQW-------------MEEE 163 Y + D V GA QY A ++P + + + Sbjct: 137 YDPAKGMFLPDRYVKGTCPNCGATDQYGDNCEACGATYDPTELKNPYSVISGATPELRDS 196 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 +FF A+ D L ++ S + ++ + + K GL+ +SR +G +IPD Sbjct: 197 EHFFFEVAHFDTFLRHWLSGDVALPSVKNKLKEWLDAKGGLRPWDISRDAPYFGFEIPDQ 256 Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYWPA 277 P YVW+DA YL + L G ++ H IGKDI+ FHA++WPA Sbjct: 257 PGKYFYVWLDAPIGYLCSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWPA 316 Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACG 336 L P ++ +G++ G K+SKS G I ++ + DALRY+ + + Sbjct: 317 VLHGTGRCAPTRLHVNGYLTVDGAKMSKSRGTFIMARTYLDAGLEPDALRYYFAAKSSGD 376 Query: 337 KDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 D + RVNADL + NL SR S I ++G + A D Sbjct: 377 VDDLDLNLSDFVARVNADLVGKLVNLASRCASFIGTRFNGQL----ADILPDRIQYDQFV 432 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY-VTVEV 454 L IR+ + A+ Q + L E ++Y D KPW + K + A L+ V + Sbjct: 433 AALTPIRDAYERNDTASAIRQTMQLADEANKYIDETKPWIIAKQH--HADAQLHAVCTQG 490 Query: 455 IRQLAILLQAFVPKLAN-KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509 + +L+ A P L + I F+A +Q ++Q L G + + + P+F R Sbjct: 491 LNLFRVLITALKPILPHTSIQAETFLAAPVTTWQDVNQPLTGGHTI-QPYSPLFTR 545 >gi|325929563|ref|ZP_08190677.1| methionyl-tRNA synthetase [Xanthomonas perforans 91-118] gi|325540073|gb|EGD11701.1| methionyl-tRNA synthetase [Xanthomonas perforans 91-118] Length = 694 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 131/498 (26%), Positives = 210/498 (42%), Gaps = 46/498 (9%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G F D HG I AA+ AGVT Sbjct: 7 VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66 Query: 69 TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A +++D + T + + + K+ G I + + + Sbjct: 67 PEAFIANIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYAKLEAAGHISRRSVAQF 125 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162 Y + D + G+ QY A + P + E Sbjct: 126 YDTAKGMFLPDRYIKGICPNCGSPDQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 E +FF + + L + + LP ++ + + + GL+ +SR +G +IP Sbjct: 186 EHFFFEVGHFDGFLREWLAG--DVALPGVKAKLKEWLDAEGGLRAWDISRDAPYFGFQIP 243 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLHVIGKDILRFHAIYW 275 P YVW+DA YL + L G A H IGKDI+ FH ++W Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFASHLVAGTQTELHHFIGKDIVNFHGLFW 303 Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREI 333 PA L P ++ +G++ G K+SKS G + +VG+ +ALRY+ + Sbjct: 304 PAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKS 362 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 + G D + RVNADL NL SR I K +DG + A ++D+ Sbjct: 363 SGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKLAD--ALPDADQYDRF 420 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450 V + L IRE + A+ Q ++L E ++Y D KPW + K + A +V Sbjct: 421 VAA--LAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCTQ 478 Query: 451 TVEVIRQLAILLQAFVPK 468 + + R L L+ +P+ Sbjct: 479 GLNLFRILVAALKPILPR 496 >gi|298205165|emb|CBI17224.3| unnamed protein product [Vitis vinifera] Length = 949 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 125/526 (23%), Positives = 233/526 (44%), Gaps = 45/526 (8%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 ++ + + I++A+ Y N PH+G+ ++ ADV AR+ RL G + ++ GTDE+G Sbjct: 19 IQGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATE 78 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A T + D+ +++ +IS+D+F RT+ + + C+ ++KK+ + + Sbjct: 79 TKAMEEKCTPQQICDKYHAIHKEVYKWFNISFDEFGRTSSPQQTEVCQAIFKKLMENNWL 138 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 + Y + + + D V Q N E+ G +D + Sbjct: 139 SENVMQQLYCDKCQKFLADRLVEGICPTQDCNYDSARGDQCEKCGKLLNPIELKDPRCKF 198 Query: 180 YESHP----------EFILPIERRNEVI------------------SFVKSGLKDLSLSR 211 S P E L ++ E I +++K GLK ++R Sbjct: 199 CHSTPHIRDTNHLFLELPLLKDKLEEYINLMSVAGSWSQNAIQATHAWLKEGLKPRCITR 258 Query: 212 KTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKD 266 WG+ +P + + YVW DA Y++ T PD K P ++ + +GKD Sbjct: 259 D-LKWGVPVPHEKFKDKVFYVWFDAPIGYVSITSCY-TPDWEKWWKNPENVELYQFMGKD 316 Query: 267 ILRFHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVD 323 + FH + +P+ LL S N L K + ++ ++ K SKS G V + V+ Sbjct: 317 NVPFHTVMFPSTLLGTSENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDAKDTNIPVE 376 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP- 378 RY+L+ D + L+ ++N++L N +GN ++R +S I K Y +IP Sbjct: 377 VWRYYLLTNRPEVSDTLFTWVDLQAKLNSELLNNLGNFINRVLSFIAKPAGLGYGSVIPD 436 Query: 379 TPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 PGA + +++ R +++ E M+ + + L +S+ SE + Y + W+L Sbjct: 437 APGAELHQLTKTLAEKVGRFVEQYVEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLY 496 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 K + S V+ ++ ++ LA LL+ F+P + ++ L + E Sbjct: 497 KEDQPSCSIVVKTSLGLVHLLACLLEPFMPSFSLEVLKQLNMPPET 542 >gi|315926518|gb|EFV05900.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 196 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 82/198 (41%), Positives = 119/198 (60%), Gaps = 5/198 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PH+GHAY IIAD LARF+RL G + F TGTDEHGQKI +AA+ Sbjct: 3 YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + + D+ S F+ + D +I+YD + RTT+ RH + + ++ K+ KGDIYK Y G Sbjct: 63 TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFIKAMFLKMWQKGDIYKDEYEGH 122 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E+++ ++ Q + ++EE YFF+LS YQDK+L +YE + I Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQ---TRILKEESYFFKLSKYQDKILQWYEE-KDPI 178 Query: 188 LPIERRNEVISFVKSGLK 205 LP + + FV++ LK Sbjct: 179 LP-KTKKRTYKFVQTALK 195 >gi|167010078|ref|ZP_02275009.1| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC200] Length = 653 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 122/493 (24%), Positives = 224/493 (45%), Gaps = 49/493 (9%) Query: 29 IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNS-RNFRDMADVL 87 I +D+ RF +L G +F G+D HG I A++ G+T + V + S R+ +D D Sbjct: 5 IQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSLGITPEELVTKYSNRHLQDFTD-F 63 Query: 88 DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG--- 144 +I++D++ T + + ++ K+++K I K + Y + + D V KG Sbjct: 64 EINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAIAQAYDPEAKMFLPDRFV-KGTCP 122 Query: 145 ---ADGQY------YNAQHNPVQWME--------------EEGYFFRLSAYQDKLLSYYE 181 A+ QY A ++P + + E +FF L A + + + E Sbjct: 123 KCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPIQKNSEHFFFDLPALEKNIKDWIE 182 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-DDPQYIMYVWIDALTNYLT 240 S+ +L E N++ + + GL+ +SR +G IP + Q YVW+DA Y+ Sbjct: 183 SNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGFAIPGTNEQKFFYVWLDAPMGYIA 240 Query: 241 T-TGYLDNPDGSKAKFW-----PADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 + Y + + + FW ++L H IGKDI+ FHA++WPA L S P VF++ Sbjct: 241 SFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYFHALFWPAILSSTGYKTPTSVFAN 300 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNA 352 GF+ G+K+SKS G I ++ + LRY+ + D + + + N+ Sbjct: 301 GFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASRLTSRIDDIDLNLEEFVTKSNS 360 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 D+ + N+ SR I K +D + + F D + S S+ I + + + Sbjct: 361 DIVGKVVNIASRCAGFIYKKFDATL-SGEIF---DPELESEFSKNHDAITQAFEKREFAH 416 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL- 469 A+ +++L + +++ D KPW+L K + V + + + L L+ +P + Sbjct: 417 AVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVCSQGINMFKVLIAYLKPIIPSIV 476 Query: 470 --ANKIFDILFVA 480 + +I F++ Sbjct: 477 AETERFLNIQFIS 489 >gi|302876074|ref|YP_003844707.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|307686795|ref|ZP_07629241.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|302578931|gb|ADL52943.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B] Length = 538 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 132/501 (26%), Positives = 221/501 (44%), Gaps = 43/501 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + I A Y N HIGH ++ DVLAR++R G +VL+ +G+D HG I+ A+ G Sbjct: 3 ILIGGAWPYANGSLHIGHIAALLPGDVLARYYRGKGDNVLYVSGSDCHGTPISIRAKKEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 V+ K D+ F+ + L+ SYD + RT ++ H + + +KG IY+ Sbjct: 63 VSPKDIADKYHGEFKKCFEKLNFSYDYYGRTDDEFHKKEVQEAILLLYNKGLIYEKEVEQ 122 Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEG------------ 164 Y + D + +G + P++ E + Sbjct: 123 IYCEHCNQFLPDRYVEGVCPKCHSIARGDQCDNCGSLLEPLELSERKCKLCNSEPIVKNA 182 Query: 165 --YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F LS +Q+ + + + I N ++K GL D ++SR GI IP Sbjct: 183 KQLYFSLSKFQNTIKENLDK-TQGNWRINAVNNTERYLKEGLCDRAISR-DLSLGIDIPI 240 Query: 222 ---DDPQYIMYVWIDALTNYLTTTG--YLDNPDGSKAKFW---PADLHVIGKDILRFHAI 273 +D + +YVWIDA+ YLT + L+N S +FW +V GKD + FH+I Sbjct: 241 QGFNDKK--VYVWIDAVLGYLTMSKKWALENKK-SYEEFWDESAISYYVHGKDNIPFHSI 297 Query: 274 YWPAFLLSANL-PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 PA + LP+++ S + +G+KIS S + ++IE DALRYF + Sbjct: 298 ILPALIKGIGYNKLPERIISSEHLTLEGKKISTSNNWAVWVPDIIEAYNSDALRYFFLIN 357 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 +D + N +L GNLV+R++ K ++ IP D +I Sbjct: 358 SPEKRDTDFSFREFVNSNNGELLGAYGNLVNRTLVFAKKYFNNKIPN----GRVDSNIKK 413 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + I + ++ + AL ++ + +++YFD + PW K + + +Y + Sbjct: 414 EIESLYDLIGKFIEQGNLKVALEKIFEFIRSINKYFDEKTPWITVKDDLEVCGNTIYNCI 473 Query: 453 EVIRQLAILLQAFVPKLANKI 473 I LA LL F+P+ + KI Sbjct: 474 YSIANLANLLSPFLPESSAKI 494 >gi|289662871|ref|ZP_06484452.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 692 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 130/498 (26%), Positives = 207/498 (41%), Gaps = 46/498 (9%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G F D HG I AA+ AGVT Sbjct: 7 VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66 Query: 69 TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A +++D + T + + + K+ G I + + + Sbjct: 67 PEAFIASIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYTKLEGAGHISRRSVAQF 125 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162 Y + D + G+ QY A + P + E Sbjct: 126 YDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 E +FF + + L + + LP ++ + + + GL+ +SR +G +IP Sbjct: 186 EHFFFEVGHFDSFLREWLAG--DVALPGVKAKLKEWLDTEGGLRAWDISRDAPYFGFQIP 243 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYW 275 P YVW+DA YL + L G +A H IGKDI+ FH ++W Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFASHLRAGTQTELHHFIGKDIVNFHGLFW 303 Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREI 333 PA L P ++ +G++ G K+SKS G + +VG+ +ALRY+ + Sbjct: 304 PAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKS 362 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 + G D + RVNADL NL SR I K +DG + A D + Sbjct: 363 SGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----AEALPDAAQYD 418 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450 L IRE + A+ Q ++L E ++Y D KPW + K + A +V Sbjct: 419 RFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCTQ 478 Query: 451 TVEVIRQLAILLQAFVPK 468 + + R L L+ +P+ Sbjct: 479 GLNLFRILVAALKPILPR 496 >gi|27904607|ref|NP_777733.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46396632|sp|Q89AX4|SYM_BUCBP RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|27904004|gb|AAO26838.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 545 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 132/533 (24%), Positives = 235/533 (44%), Gaps = 56/533 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++++ ++ A Y N HIGH E I AD+ R+ ++ G +V F D HG I +Q Sbjct: 2 KKRILVTCAFPYANGSLHIGHFLEHIQADIWVRYKKMRGHEVWFICADDAHGTPIMLKSQ 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 + ++ + F+ ++ + + +I+YD++ T + + ++ + KG I Sbjct: 62 SLKMSPESFISDIYKDHVNDLEKFNINYDNYYSTHSSENSYFLKKIYHILDKKGLIQT-- 119 Query: 124 YSGWYSLRDEA--YYNDDEVYKGAD----------------GQYYNAQH--NPVQWMEEE 163 + L D + D KGA G Y+A PV + Sbjct: 120 -RNIFQLFDNTKRVFLPDRFVKGACPICHTKDQYGDHCEVCGSSYSAVELIKPVSMLSGN 178 Query: 164 G--------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 +FF L ++ L S+ S +L ++ + K GL++ +SR + Sbjct: 179 CPILKKSLHFFFNLPYFESMLRSWVMSG---VLQASVVKKLDEWFKLGLREWDISRDSPY 235 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDIL 268 +G IP YVW+DA Y++T L + + FW + IGKDI+ Sbjct: 236 FGFNIPGFLDKYFYVWLDAPIGYISTFKNLCTQRNNLNFLDFWKKNSECELYQFIGKDIV 295 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH+++WP+ L ++N P K+F HG + G K+SKS G+ I I+ + D+LRY+ Sbjct: 296 YFHSLFWPSILEASNFRKPTKIFVHGHVTINGLKLSKSRGDCILAKNWIKNLDSDSLRYY 355 Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 +++ +D + ++N+D+ N I NL SR S I ++ + + D Sbjct: 356 YASKLSSKIQDIEVNAKHFLYKINSDVVNKIVNLASRVSSFINIYFNNELS-----SRID 410 Query: 388 ESILSVCSRVLQE---IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442 + L++ R + I + ++N + A++ VISL + Y D +KPW L K N + Sbjct: 411 D--LALYKRFVTSSSYIEKMLENCEFNSAISMVISLADIANSYVDNKKPWNLTKNIKNSN 468 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493 + + + R L L+ +P LA L + E N C L+ ++ Sbjct: 469 TLHDICTTVLNLFRILMTWLKPVMPDLAKNSEKFLNIKLEWANICIPLLNHKI 521 >gi|260575434|ref|ZP_05843433.1| methionyl-tRNA synthetase [Rhodobacter sp. SW2] gi|259022354|gb|EEW25651.1| methionyl-tRNA synthetase [Rhodobacter sp. SW2] Length = 572 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 116/512 (22%), Positives = 224/512 (43%), Gaps = 53/512 (10%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++AI Y N H+G+ + AD+ AR+ R G +V+F TDEHG AA Sbjct: 3 RILITSAIPYINGIKHLGNLVGSQLPADLYARYCRARGHEVMFICATDEHGTPAELAAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G + + + +++A +S+D F R++ R+H + ++D G I + Sbjct: 63 VGKPVEAYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALADNGLIEEVSE 122 Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160 +S+ D + D + +G + Q +P + Sbjct: 123 KQVFSITDNRFLPDRYIEGTCPNCGYTRARGDQCEECTKQLDPTDLINPRSAISGSTDLE 182 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--LKDLSLSRKTFDW 216 + + + R A + KL ++ +S ++ PI + ++ G L+D ++R W Sbjct: 183 VRQTKHLYLRQRALRGKLEAWIDSKTDW--PILTTSIAKKWLNDGDGLQDRGITRD-LHW 239 Query: 217 GIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPADL----- 260 G+ + P + YVW DA Y+ T + PD + ++W DL Sbjct: 240 GVPVKRGEADWPGMEGKVFYVWFDAPIEYIAATAEWADAHGLPDAAWQRWWRTDLGADDV 299 Query: 261 ---HVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIE 315 +GKD + FH + +PA ++ + P L + S ++ + G + S S G + + Sbjct: 300 RYVQFMGKDNVPFHTLSFPATIMGSGEPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQ 359 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 + + D R++L+ D + + + VN DLA+ +GNLVSR + Sbjct: 360 ALSILPADYWRWWLLSHAPESSDSEFTWENFQASVNKDLADVLGNLVSRVTKFARAKFGE 419 Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 +P G+F +++++ + L+ MQ + +A A++ +L + Y PW Sbjct: 420 TVPAGGSFGPREQALIDDLTSGLRAYEACMQAMEVRKAAAELRALWVAGNEYLQNAAPWT 479 Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 + KT+P+ A ++ + + +IR A++ Q F+P Sbjct: 480 VVKTDPEHAQAMVRLALNLIRVYAVISQPFIP 511 >gi|289670254|ref|ZP_06491329.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 692 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 130/498 (26%), Positives = 207/498 (41%), Gaps = 46/498 (9%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G F D HG I AA+ AGVT Sbjct: 7 VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66 Query: 69 TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A +++D + T + + + K+ G I + + + Sbjct: 67 PEAFIASIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYTKLEGAGHISRRSVAQF 125 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162 Y + D + G+ QY A + P + E Sbjct: 126 YDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 E +FF + + L + + LP ++ + + + GL+ +SR +G +IP Sbjct: 186 EHFFFEVGHFDGFLREWLAG--DVALPGVKAKLKEWLDTEGGLRAWDISRDAPYFGFQIP 243 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYW 275 P YVW+DA YL + L G +A H IGKDI+ FH ++W Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFASHLRAGTQTELHHFIGKDIVNFHGLFW 303 Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREI 333 PA L P ++ +G++ G K+SKS G + +VG+ +ALRY+ + Sbjct: 304 PAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKS 362 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 + G D + RVNADL NL SR I K +DG + A D + Sbjct: 363 SGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----AEALPDAAQYD 418 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450 L IRE + A+ Q ++L E ++Y D KPW + K + A +V Sbjct: 419 RFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCTQ 478 Query: 451 TVEVIRQLAILLQAFVPK 468 + + R L L+ +P+ Sbjct: 479 GLNLFRILVAALKPILPR 496 >gi|260433994|ref|ZP_05787965.1| methionyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] gi|260417822|gb|EEX11081.1| methionyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] Length = 572 Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 115/524 (21%), Positives = 228/524 (43%), Gaps = 49/524 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++AI Y N H+G+ + AD+ AR+ R G +V+F TDEHG AA Sbjct: 3 RILITSAIPYINGIKHLGNLIGSQLPADLFARYQRGRGNEVMFLCATDEHGTPAELAAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + + D+A +S+D F R++ ++H + K+++ G I + Sbjct: 63 AGKPVAEYCAEMHEVQADIAKRFGLSFDHFGRSSSPQNHKLTQHFAGKLAEAGLIREVTE 122 Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM------------- 160 YS D + D E +G + Q +P + Sbjct: 123 KQVYSKADGRFLPDRYIEGTCPNCGYEKARGDQCENCTKQLDPTDLIDPRSAISGSTDLE 182 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E + + R SA +D+L ++ +S ++ + + GL+D ++R DWGI Sbjct: 183 VRETKHLYLRQSAMKDQLDAWIDSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGI 241 Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPAD-------- 259 + P + YVW DA Y+ + PD ++W D Sbjct: 242 PVKKGDEDWPGMEGKVFYVWFDAPIEYIACAKEWADAHGKPDAEWERWWRTDKGADDVRY 301 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 + +GKD + FH + +PA +L + P L + S ++ + G + S S G + + + Sbjct: 302 VQFMGKDNVPFHTLSFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 361 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 + + D R++L+ D + + ++ VN DLA+ +GN VSR + + Sbjct: 362 DILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSKFGEEV 421 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G + E +++++ ++ ++ +M+ + ++ ++ ++ + Y A PW Sbjct: 422 PAGGEYGEREQALIEELTKRIRAYEAHMEAMEVRKSAQELRAIWVAGNEYLQAAAPWSTF 481 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 K +P++A+ + + + +IR A+L F+P+ + ++ + D Sbjct: 482 KEDPEQAAAQVRLGLNLIRLYAVLSAPFIPETSARMLSAMNTLD 525 >gi|166712769|ref|ZP_02243976.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 694 Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 129/502 (25%), Positives = 209/502 (41%), Gaps = 54/502 (10%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G F D HG I AA+ AGVT Sbjct: 7 VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66 Query: 69 TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A +++D + T + + + K+ G I + + + Sbjct: 67 PEAFIASIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYTKLEAAGHISRRSVAQF 125 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162 Y + D + G+ QY A + P + E Sbjct: 126 YDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 E +FF + + L + + LP ++ + + + GL+ +SR +G ++P Sbjct: 186 EHFFFEVGQFDGFLREWLAG--DVALPGVKAKLKEWLDAEGGLRAWDISRDAPYFGFQMP 243 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNP----------DGSKAKFWPADLHVIGKDILRFH 271 P YVW+DA YL + L DG++ + H IGKDI+ FH Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFAAHLVDGTQTELH----HFIGKDIVNFH 299 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFL 329 ++WPA L P ++ +G++ G K+SKS G + +VG+ +ALRY+ Sbjct: 300 GLFWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYF 358 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 + + G D + RVNADL NL SR I K +DG + A D Sbjct: 359 AAKSSGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----AEALPDT 414 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--ST 446 + L IRE + A+ Q ++L E ++Y D KPW + K + A + Sbjct: 415 AQYDRFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDSADAQLQS 474 Query: 447 VLYVTVEVIRQLAILLQAFVPK 468 V + + R L L+ +P+ Sbjct: 475 VCTQGLNLFRVLVAALKPILPR 496 >gi|315185895|gb|EFU19660.1| methionyl-tRNA synthetase [Spirochaeta thermophila DSM 6578] Length = 719 Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 125/516 (24%), Positives = 228/516 (44%), Gaps = 56/516 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++K I++A+ Y N PH+G+ +++ ADV AR+ R G + L+ GTDE+G A Sbjct: 2 KKKRLITSALPYVNNVPHLGNLIQVLSADVFARYCRSAGYETLYVCGTDEYGTATETRAL 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ K D+ ++ + +I +D + RT+ H + ++ K+ G I + Sbjct: 62 EEGISPKELCDRFHAIHTEIYEWFEIQFDKWGRTSTPEHTRITQDIFLKLDRNGYIKERT 121 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWM------------ 160 YS + + + D V Y+ A G ++ +P + + Sbjct: 122 IQQLYSEKSDMFLADRYVRGTCPHCGYEDARGDQCEHCGKLLDPTELIDPRSAIDGSTPV 181 Query: 161 --EEEGYFFRLSAYQDKLLSYYES---HPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 E + + L A KL ++ E + R E S+++ GL++ ++R Sbjct: 182 LRETKHLYLDLPALLPKLKAWMEKASVEGRWATNAIRMTE--SWIRDGLRERCITRD-LK 238 Query: 216 WGIKIPDDPQY---IMYVWIDALTNYLTTTG--------YLDNPDGSKAKFWPADLHVIG 264 WG+ +P P Y + YVW DA Y++ T + NPD + IG Sbjct: 239 WGVPVPK-PGYENKVFYVWFDAPIGYISITATYTDRWEEWWKNPDEVEL------YQFIG 291 Query: 265 KDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321 KD + FH + +P+ LL L K + S ++ ++ K SKS G V + Sbjct: 292 KDNIPFHTVIFPSTLLGTGEEWTLLKTMSSTEYLNYESGKFSKSRGVGVFGNDAKDTGIP 351 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D R++L D + +++VN +L NLV+R++S I + Y G IP Sbjct: 352 ADVWRFYLFYNRPETSDYTFTWKDFQEKVNGELIGNFANLVNRTLSFIHRFYQGRIPE-- 409 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 +D + + ++I E ++ + A V +L ++ F A +PW+ + NP Sbjct: 410 --APTDTAFWGRVRELEEKITEYLEGAQLRDAFRTVFALSDLGNKAFQAGEPWKTRTENP 467 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + A +L ++R LAIL++ ++P + +I + L Sbjct: 468 EEAEKLLRHLAYLVRDLAILVEPYLPATSRRILEFL 503 >gi|325921029|ref|ZP_08182910.1| methionyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865] gi|325548478|gb|EGD19451.1| methionyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865] Length = 696 Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 130/498 (26%), Positives = 207/498 (41%), Gaps = 46/498 (9%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G F D HG I AA+ AGVT Sbjct: 7 VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66 Query: 69 TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A +++D + T + + + K+ G I + + + Sbjct: 67 PEAFIANIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYSKLEAAGHISRRSVAQF 125 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162 Y + D + G+ QY A + P + E Sbjct: 126 YDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 E +FF + + L + + LP ++ + + + GL+ +SR +G +IP Sbjct: 186 EHFFFEVGHFDGFLREWLAG--DVALPGVKAKLKEWLDTEGGLRAWDISRDAPYFGFQIP 243 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLHVIGKDILRFHAIYW 275 P YVW+DA YL + L G A H IGKDI+ FH ++W Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFQAHLVAGTQTELHHFIGKDIVNFHGLFW 303 Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREI 333 PA L P ++ +G+++ G K+SKS G + +VG+ +ALRY+ + Sbjct: 304 PAVLHGTGHRAPTRLHVNGYLMVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKS 362 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 + G D + RVN+DL NL SR I K +DG + A T D + Sbjct: 363 SGGVDDLDLNLGDFVTRVNSDLVGKFVNLASRCAGFIGKRFDGKL----ADTLPDLAQYE 418 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450 L IRE + A+ Q ++L E ++Y D KPW + K A +V Sbjct: 419 RFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQEGADAQLQSVCTQ 478 Query: 451 TVEVIRQLAILLQAFVPK 468 + + R L L+ +P+ Sbjct: 479 GLNLFRILVAALKPILPR 496 >gi|58581547|ref|YP_200563.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623480|ref|YP_450852.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188577209|ref|YP_001914138.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] gi|68565959|sp|Q5H1J3|SYM_XANOR RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|123766596|sp|Q2P4E9|SYM_XANOM RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|226710939|sp|B2SRQ4|SYM_XANOP RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|58426141|gb|AAW75178.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367420|dbj|BAE68578.1| Methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188521661|gb|ACD59606.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 694 Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 129/502 (25%), Positives = 209/502 (41%), Gaps = 54/502 (10%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G F D HG I AA+ AGVT Sbjct: 7 VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66 Query: 69 TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A +++D + T + + + K+ G I + + + Sbjct: 67 PEAFIASIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYTKLEAAGHISRRSVAQF 125 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162 Y + D + G+ QY A + P + E Sbjct: 126 YDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPRSVISGATPELRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 E +FF + + L + + LP ++ + + + GL+ +SR +G ++P Sbjct: 186 EHFFFEVGQFDGFLHEWLAG--DVALPGVKAKLKEWLDAEGGLRAWDISRDAPYFGFQMP 243 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNP----------DGSKAKFWPADLHVIGKDILRFH 271 P YVW+DA YL + L DG++ + H IGKDI+ FH Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFAAHLVDGTQTELH----HFIGKDIVNFH 299 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFL 329 ++WPA L P ++ +G++ G K+SKS G + +VG+ +ALRY+ Sbjct: 300 GLFWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYF 358 Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 + + G D + RVNADL NL SR I K +DG + A D Sbjct: 359 AAKSSGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----AEALPDA 414 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--ST 446 + L IRE + A+ Q ++L E ++Y D KPW + K + A + Sbjct: 415 AQYDRFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDSADAQLQS 474 Query: 447 VLYVTVEVIRQLAILLQAFVPK 468 V + + R L L+ +P+ Sbjct: 475 VCTQGLNLFRVLVAALKPILPR 496 >gi|86136378|ref|ZP_01054957.1| methionyl-tRNA synthetase [Roseobacter sp. MED193] gi|85827252|gb|EAQ47448.1| methionyl-tRNA synthetase [Roseobacter sp. MED193] Length = 575 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 120/531 (22%), Positives = 225/531 (42%), Gaps = 49/531 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M ++ I++AI Y N H+G+ + AD+ ARF R G +V+F TDEHG Sbjct: 1 MDGMARILITSAIPYINGIKHLGNLVGSQLPADLYARFQRATGNEVMFLCATDEHGTPAE 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AA AG + F + D+A +S+D F R++ ++H + K+++ G I Sbjct: 61 LAAAKAGQPVEEFCAEMHEVQADIAKGFGLSFDHFGRSSSPQNHALTQHFAGKLAEAGLI 120 Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG---- 164 + S YS D + D E +G + Q +P + Sbjct: 121 REVDDSQIYSHADGRFLPDRYVEGTCPNCGFEKARGDQCEECTKQLDPTDLINPRSAISG 180 Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 F S +D+L ++ S ++ + + GL+D ++R Sbjct: 181 STDLEVRATKHLFLCQSQMKDQLDAWINSKSDWPVLTTSIAKKWLHDGDGLQDRGITRD- 239 Query: 214 FDWGIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADL-- 260 DWGI + P + YVW DA Y+ G +G ++W D+ Sbjct: 240 LDWGIPVKKGTEDWPGMEGKVFYVWFDAPIEYIAAAGEWAEANGKTDADWQRWWRTDMGA 299 Query: 261 ------HVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVID 312 +GKD + FH + +PA +L + P L + S ++ + G + S S G I Sbjct: 300 DDVKYVQFMGKDNVPFHTLSFPATILGSGEPWKLVDHLKSFNYLNYDGGQFSTSQGRGIF 359 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 + +E + D R++L+ D + + ++ VN DLA+ +GN VSR Sbjct: 360 MDQALEILPADYWRWWLLSHAPESSDSEFTWEQFQQSVNKDLADVLGNFVSRITKFCRSK 419 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 + +P + ++++++ + ++ ++M+N + ++ ++ ++ + Y + Sbjct: 420 FGEAVPESAPYGAPEQALIADLTSRIRAYEQHMENMEVRKSAQELRAIWVAGNEYLQSTA 479 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 PW KT+P A+T + + + +IR A+L F+P + + L D + Sbjct: 480 PWATFKTDPQLAATQVRLGLNLIRLYAVLSSPFIPNASEVLMQALNCDDRS 530 >gi|294665009|ref|ZP_06730318.1| methionyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605228|gb|EFF48570.1| methionyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 694 Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 129/497 (25%), Positives = 209/497 (42%), Gaps = 44/497 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G F D HG I AA+ AGVT Sbjct: 7 VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66 Query: 69 TKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + + RD A +++D + T + + + K+ G I + + + Sbjct: 67 PEAFIANVQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYAKLDAAGHISRRSVAQF 125 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162 Y + D + G+ QY A + P + E Sbjct: 126 YDTAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPRSVISGAKPELRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222 E +FF + + D L + + + ++ + + + GL+ +SR +G +IP Sbjct: 186 EHFFFEVGHF-DGFLRQWLAGDVALPGVKAKLKEWLDAEGGLRAWDISRDAPYFGFQIPG 244 Query: 223 DPQYIMYVWIDALTNYLTTTGYL-----DNPDGSKAKFWPADL-HVIGKDILRFHAIYWP 276 P YVW+DA YL + L ++ D +L H IGKDI+ FH ++WP Sbjct: 245 QPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFDAHLVAGTQTELHHFIGKDIVNFHGLFWP 304 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIA 334 A L P ++ +G++ G K+SKS G + +VG+ +ALRY+ + + Sbjct: 305 AVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKSS 363 Query: 335 CGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 G D + RVNADL NL SR I K +DG + A D + Sbjct: 364 GGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----ADALPDAAQYDR 419 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451 L IRE + A+ Q + L E ++Y D KPW + K + A +V Sbjct: 420 FVAALAPIREAYERNDAASAIRQTMELADEANKYIDDTKPWVIAKQDGADAQLQSVCTQG 479 Query: 452 VEVIRQLAILLQAFVPK 468 + + R L L+ +P+ Sbjct: 480 LNLFRILVAALKPILPR 496 >gi|326511433|dbj|BAJ87730.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 798 Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 129/531 (24%), Positives = 242/531 (45%), Gaps = 54/531 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + I++A+ Y N PH+G+ ++ ADV AR+ RL G + ++ GTDE+G A Sbjct: 16 RRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETKA 75 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + K D+ ++ DI +D F RT+ + C+ ++ K+ + + + Sbjct: 76 LEEKCSPKEICDKYHVIHDEVYKWFDIKFDKFGRTSAPEQTEVCQAIFHKLMENKWLTEN 135 Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-QYYNAQH--NPVQWMEEEG----- 164 Y E + D V Y+ A G Q N NP + ++ + Sbjct: 136 TMQQLYCDTCERFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCKN 195 Query: 165 ---------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---FVKSGLKDLSLSRK 212 F L DKL++Y + + + +N + + ++K GLK ++R Sbjct: 196 APRIRDTDHLFLELPLLSDKLVNYINNTS--VAGMWSQNAIQATNAWLKEGLKQRCITRD 253 Query: 213 TFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGK 265 WG+ +P + + YVW DA Y++ T PD K +W P ++ + +GK Sbjct: 254 -LKWGVPVPHEKYKDKVFYVWFDAPIGYISITASY-TPDWEK--WWKDPDNVELFQFMGK 309 Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322 D + FH + +P+ LL N + K + ++ ++ K SKS G V + + Sbjct: 310 DNVPFHTVMFPSTLLGTGENWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKVTNIPS 369 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP 378 + RY+L+ D + L+ ++N++L N +GN ++R +S + K YD +IP Sbjct: 370 EVWRYYLLMNRPEASDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSIIP 429 Query: 379 -TPGAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 P A + + S L+ ++ +++ E M+ + + L +++ S+ + Y + W L Sbjct: 430 DAPNAESHTLTSALAEKTNKWVEQYLEAMEKVKLKQGLKSAMAISSDGNAYLQESQFWRL 489 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-DENRCF 486 K +P + V+ +V V+ LA LL+ F+P + ++ L ++ DE+ F Sbjct: 490 YKEDPAACAIVMKTSVGVVYLLACLLEPFMPSFSREVLRQLNMSPDEDLSF 540 >gi|78046997|ref|YP_363172.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123757531|sp|Q3BVP1|SYM_XANC5 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|78035427|emb|CAJ23072.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 694 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 130/498 (26%), Positives = 206/498 (41%), Gaps = 46/498 (9%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G F D HG I AA+ AGVT Sbjct: 7 VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66 Query: 69 TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A +++D + T + + + K+ G I + + + Sbjct: 67 PEAFIANIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYAKLEAAGHISRRSVAQF 125 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162 Y + D + G+ QY A + P + E Sbjct: 126 YDTAKGMFLPDRYIKGICPNCGSPDQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 E +FF + + L + + LP ++ + + + GL+ +SR +G +IP Sbjct: 186 EHFFFEVGHFDGFLREWLAG--DVALPGVKAKLKEWLDAEGGLRAWDISRDAPYFGFQIP 243 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLHVIGKDILRFHAIYW 275 P YVW+DA YL + L G A H IGKDI+ FH ++W Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFASHLVAGTQTELHHFIGKDIVNFHGLFW 303 Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREI 333 PA L P ++ +G++ G K+SKS G + +VG+ +ALRY+ + Sbjct: 304 PAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKS 362 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 + G D + RVNADL NL SR I K +DG + A D + Sbjct: 363 SGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----ADALPDAAQYD 418 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450 L IRE + A+ Q ++L E ++Y D KPW + K + A +V Sbjct: 419 RFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCTQ 478 Query: 451 TVEVIRQLAILLQAFVPK 468 + + R L L+ +P+ Sbjct: 479 GLNLFRILVAALKPILPR 496 >gi|294626909|ref|ZP_06705500.1| methionyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598769|gb|EFF42915.1| methionyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 691 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 129/497 (25%), Positives = 207/497 (41%), Gaps = 44/497 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G F D HG I AA+ AGVT Sbjct: 7 VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66 Query: 69 TKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + + RD A +++D + T + + + K+ G I + + + Sbjct: 67 PEAFIANVQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYAKLDAAGHISRRSVAQF 125 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162 Y + D + G+ QY A + P + E Sbjct: 126 YDTAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222 E +FF + + D L + + + ++ + + + GL+ +SR +G +IP Sbjct: 186 EHFFFEVGHF-DGFLRQWLAGDVALPGVKAKLKEWLDAEGGLRAWDISRDAPYFGFQIPG 244 Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLHVIGKDILRFHAIYWP 276 P YVW+DA YL + L G A H IGKDI+ FH ++WP Sbjct: 245 QPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFQAHLVAGTQTELHHFIGKDIVNFHGLFWP 304 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIA 334 A L P ++ +G++ G K+SKS G + +VG+ +ALRY+ + + Sbjct: 305 AVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKSS 363 Query: 335 CGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 G D + RVNADL NL SR I K +DG + A D + Sbjct: 364 GGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----ADALPDAAQYDR 419 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451 L IRE + A+ Q ++L E ++Y D KPW + K + A +V Sbjct: 420 FVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCTQG 479 Query: 452 VEVIRQLAILLQAFVPK 468 + + R L L+ +P+ Sbjct: 480 LNLFRILVAALKPILPR 496 >gi|329119551|ref|ZP_08248235.1| methionine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] gi|327464338|gb|EGF10639.1| methionine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] Length = 691 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 128/520 (24%), Positives = 222/520 (42%), Gaps = 55/520 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ K+ +++A+ Y N H+GH E I D+ RF +L G D + D HG + Sbjct: 1 MTQKRKILVTSALPYANGSIHLGHMVEHIQTDIWVRFQKLRGHDCRYCCADDTHGTPVML 60 Query: 61 AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AAQ V + + + + D L I YD++ T + + ++ + G I Sbjct: 61 AAQKQDVQPEDMIARVREEHLADFTGFL-IGYDNYYSTHSPENKELSEKIYLALKANGKI 119 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM-------- 160 + + D V G + + ++P + + Sbjct: 120 ESRTIEQLFDPEKHMFLPDRFVKGECPKCHAADQYGDNCEVCGTTYSPTELIKPYSAVSG 179 Query: 161 ------EEEGYFFRLSAYQDKLLSYY-------ESHPEFILPIERRNEVISFV----KSG 203 E E +FF+L D L + + + L E N++ ++ ++ Sbjct: 180 ATPVLKESEHFFFKLGKCADYLKQWTAGSTTLPDGREQPHLQPEALNKMNEWLGKDGETT 239 Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD--- 259 L D +SR +G +IP P YVW+DA Y+ + L G + ++ D Sbjct: 240 LSDWDISRDAPYFGFEIPGAPGKYFYVWLDAPVGYMASFKNLCARAGIEFDDYFRTDSDT 299 Query: 260 --LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 H IGKDIL FHA++WPA L + P VF+HGF+ G+K+SKS G I + Sbjct: 300 EMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVFAHGFLTVDGQKMSKSRGTFITAKSYL 359 Query: 318 EE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 E+ + + +RY++ ++ +D + RVN+DL N+ +R+ I K ++G Sbjct: 360 EQKLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG 419 Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 + S ++L + + I + + RAL +++L V+ Y DA KPWE Sbjct: 420 SLKDV-----SGSALLKKLAAESETIAAAYEEREYARALRDIMALADAVNEYTDANKPWE 474 Query: 436 LKKTNPDRASTVLYVTVEVIRQLAIL---LQAFVPKLANK 472 L K + + V E+I A+L L +P++A + Sbjct: 475 LAK-QAGQEVRLHEVCSELINAFAVLSVYLAPVLPRVAEQ 513 >gi|285019248|ref|YP_003376959.1| methionyl-tRNA synthetase [Xanthomonas albilineans GPE PC73] gi|283474466|emb|CBA16967.1| probable methionyl-trna synthetase protein [Xanthomonas albilineans] Length = 686 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 133/498 (26%), Positives = 213/498 (42%), Gaps = 48/498 (9%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G F D HG I AA+ AGVT Sbjct: 7 VTTALPYANGPLHLGHLVGYIQADIWVRARRLHGDRAWFVCADDTHGTPIMLAAEKAGVT 66 Query: 69 TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A +++D + T + + ++ G I + + + Sbjct: 67 AEDFIASIQASHERDFA-AFGVAFDHYDSTNSAANRALTEAFYARLDAGGHIARRRVAQF 125 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162 Y + D + G+ QY A + P + E Sbjct: 126 YDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGTTPELRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS--GLKDLSLSRKTFDWGIKI 220 E +FF + + L + + LP + +++ ++ S GL+ +SR +G +I Sbjct: 186 EHFFFEVGRFDRFLRDWLAG--DVALP-GVKAKLMEWLDSEGGLRAWDISRDAPYFGFQI 242 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYL-----DNPDGSKAKFWPADLH-VIGKDILRFHAIY 274 P P YVW+DA YL++ L ++ + A +LH IGKDI+ FH ++ Sbjct: 243 PGQPGKYFYVWLDAPIGYLSSFQTLCARLGESFEAHLAAGSSTELHHFIGKDIVNFHGLF 302 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVRE 332 WPA L P ++ +G++ G K+SKS G + + +VG+ +ALRY+ + Sbjct: 303 WPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTYL-DVGLEPEALRYYFAAK 361 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 + G D + RVNADL NL SR I K + G + A T D + Sbjct: 362 SSGGVDDLDLNLSDFIARVNADLVGKFVNLASRCAGFIDKRFGGTL----AETLPDPAQY 417 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLY 449 + L IRE A+ Q ++L E ++Y D KPW L K + AS V Sbjct: 418 AHFVAALSPIREAYARNDPASAIRQTMALADEANKYIDEHKPWVLAKQDGAEASLQAVCT 477 Query: 450 VTVEVIRQLAILLQAFVP 467 + + R LA L+ +P Sbjct: 478 QGLNLFRVLAAALKPVLP 495 >gi|294630424|ref|ZP_06708984.1| methionyl-tRNA synthetase [Streptomyces sp. e14] gi|292833757|gb|EFF92106.1| methionyl-tRNA synthetase [Streptomyces sp. e14] Length = 571 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 131/529 (24%), Positives = 231/529 (43%), Gaps = 49/529 (9%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N H+G+ M+ ADV +R+ R G DVL+ TDEHG AA+ G+ Sbjct: 6 ITSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHDVLYICATDEHGTPAELAAKEQGI 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 F Q + + D +++D F R++ +++H+ + + +++ G I + Sbjct: 66 PVAEFCAQAHDAQKAIYDGFSLAFDHFGRSSSRQNHEITQEIARELKANGFIEERAIRQV 125 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL-LSYYE 181 YS D + D + + G D + N + ++ SA L E Sbjct: 126 YSNADGRFLPDRYIIGTCPHCGYDKARGDQCENCTRVLDPTDLIEPRSAISGSADLEIRE 185 Query: 182 SHPEFILPIERRNEVISFV-------------------KSGLKDLSLSRKTFDWGIKIPD 222 + F+L EV ++V GL D +++R DWG+ +P Sbjct: 186 TKHLFLLQSTLAGEVEAWVDERADDWPVLASSIARKWLTEGLHDRAITRD-LDWGVPVPA 244 Query: 223 DP-------QYIMYVWIDALTNYLTTTGYLDNPDGS----KAKFWPADLHV-----IGKD 266 D + YVW DA Y+ +T D ++ +W +D V +GKD Sbjct: 245 DTWPDLAAEGKVFYVWFDAPIEYIGSTKEWAELDPENRDWRSWWWESDADVRYTQFMGKD 304 Query: 267 ILRFHAIYWPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 + FH++ +PA LL P K K F+ ++ + G K S S + + +E + Sbjct: 305 NVPFHSVMFPATLLGTRAPWKKVDVIKAFN--WLNYYGGKFSTSQHRGVFTHDALEILPA 362 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D RYF++ D + + VN DLA+ +GN V+R +S K + +P G Sbjct: 363 DYWRYFMMANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFGDEVPQGGE 422 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 E++ + + +R+L E E M+ +A A + +L S + Y + + PW KT+ D Sbjct: 423 PGEAEAKLGAEIARLLAEYEEQMEAIQFRKAAAALRALWSAGNSYLEEKAPWLEIKTDKD 482 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491 A+ L + +I A++ + F+P A + + D+ + S D+ Sbjct: 483 GAALTLRTAMNLIHLYAVVSEPFIPTTAKAMRSAFALPDDTATWVSADE 531 >gi|238785448|ref|ZP_04629433.1| Methionyl-tRNA synthetase [Yersinia bercovieri ATCC 43970] gi|238713653|gb|EEQ05680.1| Methionyl-tRNA synthetase [Yersinia bercovieri ATCC 43970] Length = 635 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 117/469 (24%), Positives = 207/469 (44%), Gaps = 44/469 (9%) Query: 40 LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99 + G V F D HG I AQ G+ + + + S+ + ISYD++ T Sbjct: 1 MRGNQVHFICADDAHGTPIMLKAQQLGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHS 60 Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY---- 149 + + +++ ++ G I S Y ++ + D KG A QY Sbjct: 61 DENRELSSLIYSRLKANGYIKNRTISQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNC 119 Query: 150 --YNAQHNPVQWM--------------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193 A ++P + + E + +FF L A+ + L ++ S L + Sbjct: 120 EVCGATYSPTELIDPKSAVSGATPVMRESKHFFFDLPAFSEMLQAWTRSG---ALQEQVA 176 Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253 N++ + +SGL+ ++R +G ++PD P YVW+DA Y+ L + G Sbjct: 177 NKMQEWFESGLQQWDITRDAPYFGFEVPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLD 236 Query: 254 --KFW----PADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306 +FW DL H IGKDI+ FH+++WPA L +N P +F HG++ G K+SKS Sbjct: 237 FDEFWREGAETDLYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKS 296 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRS 365 G I ++ + D LRY+ +++ D + + +RVNAD+ N + NL SR+ Sbjct: 297 RGTFIKAGTYLKHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRN 356 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 I K + G + A +D ++ + I + ++ +A+ ++++L + Sbjct: 357 AGFINKRFAGKL----ADQLADPALYKTFTDAAVSIADAYNSRESSKAIREIMALADVAN 412 Query: 426 RYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 RY D Q PW + K A + + + + R L L+ +P L + Sbjct: 413 RYIDEQAPWVVAKEEGRDAELQAICSMGINLFRVLMTYLKPVLPSLNER 461 >gi|225463876|ref|XP_002268996.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296081059|emb|CBI18340.3| unnamed protein product [Vitis vinifera] Length = 804 Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 142/566 (25%), Positives = 255/566 (45%), Gaps = 73/566 (12%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV AR+ RL G +VL+ GTDE+G A Sbjct: 18 KRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVLYICGTDEYGTATETKA 77 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + + D+ + +++ D IS+D+F RT+ +H + C+ ++KK+ + + + Sbjct: 78 MEENCSPQQICDKYHKIHKEVYDWFGISFDEFGRTSTPQHTEVCQAIFKKLMENNWLSEN 137 Query: 123 CYSGWYSLRDEAYYND----------DEVYKGADGQYYN------------------AQH 154 Y + + D D Y A G Q Sbjct: 138 RMQQLYCETCQRFLADRLVEGTCPTLDCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQS 197 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV---ISFVKSGLKDLSLSR 211 +P Q + + F L +DKL Y + I +N + +++K GL+ ++R Sbjct: 198 SP-QIRDTDHLFLELPLLKDKLEEYINNMS--IAGCWSQNAIQATYAWLKEGLRSRCITR 254 Query: 212 KTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKD 266 WG+ +P + + YVW DA Y++ T P+ K P ++ +GKD Sbjct: 255 D-LKWGVPVPHEKYKDKVFYVWFDAPIGYVSITACY-TPEWEKWWKNPENVDLYQFMGKD 312 Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEE 319 + FH + +P+ L+ N L K + ++ ++ K SKS GN + ++ E Sbjct: 313 NVPFHTVMFPSTLIGTGENWTLMKSISVTEYLNYEAGKFSKSKGVGVFGNDVKDTKIPAE 372 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDG 375 V RY+L+ D + L+ ++N +L N +GN ++R +S I K Y Sbjct: 373 V----WRYYLLTNRPEVSDSLFTWVDLQAKLNTELLNNLGNFINRVLSFIAKAPGLGYGS 428 Query: 376 MIP-TPGAFTESDESILSVCSRV---LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 IP PGA ES ++ +V L++ E M+ + + L +S+ SE + Y Sbjct: 429 SIPDAPGA--ESHYLTKALAEKVGAYLEQYIEAMEKVKLKQGLKIGMSISSEGNGYLQES 486 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR---CFQS 488 + W+L K + S V+ +V ++ L+ LL+ F+P + ++ L + E R C ++ Sbjct: 487 QFWKLYKEDRASCSIVMRTSVGLVYLLSCLLEPFMPSFSLEVLKQLNLPPETRLSLCDEN 546 Query: 489 --LDQRLKPGFML---HK--TFDPIF 507 L++ KP +L HK T +P+F Sbjct: 547 GDLERARKPWELLPAGHKMGTPEPLF 572 >gi|55378546|ref|YP_136396.1| methionyl-tRNA synthetase [Haloarcula marismortui ATCC 43049] gi|68565966|sp|Q5V1B3|SYM_HALMA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|55231271|gb|AAV46690.1| methionyl-tRNA synthetase [Haloarcula marismortui ATCC 43049] Length = 717 Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 126/529 (23%), Positives = 218/529 (41%), Gaps = 75/529 (14%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N H+GH + D L+R R G F +G+D HG +A A GV Sbjct: 14 VTCGLPYANGDLHVGHLRTYVDGDALSRALRRIGQQTAFVSGSDMHGTPVAVNAAEEGVA 73 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR------------------HHDTCRILW 110 + F + + +I +D++ T ++ H + W Sbjct: 74 PREFALDFHETYAETFPQFNIEFDNYGHTDDETNVELTQEFVRSWVENDHVHEKEIEVAW 133 Query: 111 KKISDKG--DIY--KGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNA-----QHNPVQWM 160 D+ D Y C Y G + DE D+ + + A NP ++ Sbjct: 134 DTEEDQPLPDRYVEGTCPYCGEQARGDEC---DEGCQRHLEPGEIEAPVSTLTGNPAEYR 190 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E F RL+ +Q+ L + + +N+ +++ L+DL ++R DWG+ Sbjct: 191 TREHKFLRLADFQEYLQGFLDR---LEGTDNAQNQPREWIEGELQDLCITRD-MDWGVDY 246 Query: 221 PDD----PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----------------- 259 P+D + ++YVW+DA Y+ +T G W A Sbjct: 247 PEDVDGGDELVLYVWVDAPIEYVASTKQYTERVGDDEYDWEAVWKIDSEERHGTEWDDEW 306 Query: 260 -------LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312 +HVIG+DI++ HA++WPA L A P+ + + GF+ G +S S + Sbjct: 307 ADDSGEIIHVIGRDIIQHHAVFWPAMLRGAGYNEPRSILATGFVGIDGNALSTSRNRAVW 366 Query: 313 PIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 E ++ D RY++ D + D ++RVN +L +GN + RS+ + Sbjct: 367 ADEYLDAGFHPDLFRYYIATGAQIDTDVDFSWDRFQERVNGELVGNVGNFIYRSLLFAER 426 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIR--ENMQNQLIHRALAQV-ISLVSEVDRYF 428 +YDG TP A D V R+ I E + R LA++ I L + + Y Sbjct: 427 NYDG---TPDAAVSDD-----VRGRIEDAIADFEAAVREYDIRELAEIAIELSNYGNEYI 478 Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +PW L +P+ A V+ V++ + +A+L+Q +P A +++ L Sbjct: 479 QRNEPWNLVDDDPEEAEQVIRDCVQLTKAVAVLMQPVLPGKAERLWGQL 527 >gi|153873508|ref|ZP_02002069.1| truncated Methionyl-tRNA synthetase [Beggiatoa sp. PS] gi|152070026|gb|EDN67931.1| truncated Methionyl-tRNA synthetase [Beggiatoa sp. PS] Length = 398 Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 114/399 (28%), Positives = 175/399 (43%), Gaps = 38/399 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M R+ L +++A+ Y N HIGH E I D+ RF +L G + D HG I Sbjct: 1 MTTRQIL-VTSALPYANGPIHIGHLVEYIQTDIWVRFQKLRGHTCYYVCADDAHGTPIML 59 Query: 61 AAQNAGVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AQ G+T + + + S + D AD I +D++ T + +++++ + G I Sbjct: 60 KAQKEGITPEELITRYSTEHQADFAD-FAIGFDNYYSTHSSENEHFSQLIYQGLKTAGHI 118 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY----------YNAQH--NPVQWM-- 160 + +Y E + D + GA QY YN NPV + Sbjct: 119 ERRTIRQFYDPIKEMFLPDRFIRGECPNCGAKDQYGDSCEVCSKTYNPTELKNPVSAVSG 178 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E E F LS ++ L + S+ L R+++ + SGL+ +SR Sbjct: 179 ATPVEKESEHLFVNLSDFETMLQEWIGSNA---LQPAVRHKLNEWFDSGLQAWDISRDAP 235 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVIGKDIL 268 +G +IPD+P YVW+DA Y+ + L D FW D H IGKDI Sbjct: 236 YFGFEIPDEPGKYFYVWLDAPIGYMASFKQLCDQKQIDFNAFWQKDSQAEVYHFIGKDIQ 295 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH ++WPA L + P VF HGF+ G+K+SK+ G I + + + LRY+ Sbjct: 296 YFHCLFWPAMLTAGGFRKPTAVFVHGFLKVDGQKMSKTRGTFISARTYLNHLQPEYLRYY 355 Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSV 366 ++ G D + + +RVNADL N+ SR Sbjct: 356 FAAKLGDGVDDIDLNLEDFVQRVNADLVGKFVNIASRCA 394 >gi|159040724|ref|YP_001539976.1| methionyl-tRNA synthetase [Caldivirga maquilingensis IC-167] gi|187647711|sp|A8MA54|SYM_CALMQ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|157919559|gb|ABW00986.1| methionyl-tRNA synthetase [Caldivirga maquilingensis IC-167] Length = 582 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 124/507 (24%), Positives = 227/507 (44%), Gaps = 46/507 (9%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + +A Y A PH+G+ ++ ADV R+ +L G DV+F TG+DEHG I A G+ Sbjct: 19 VGSAWPYIYAVPHLGNLIGSLLSADVFTRYLKLKGYDVVFVTGSDEHGTPIEVEAIKLGI 78 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + D+ + + I D++ RT + H R + KI + G I+ Sbjct: 79 EPRQLTDRMHEIIVKLLKLWGIEPDNYTRTESEVHKWYVRDAFTKIYNNGYIFTKDDELP 138 Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP--------VQWMEE 162 Y RD+ + D V Y A G Q N NP +W Sbjct: 139 YCPRDKIFLPDRFVIGTCPYCGYPYARGDQCENCGRLLEPRMLINPKCAICGSTPEWRLT 198 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK--I 220 ++ L +D++ SY E + LP + + +K GL+ +++R WGI Sbjct: 199 RHWYLDLRRLEDRIRSYIEGNSA--LPDNAKQMSLGILKEGLRPRAITRDN-KWGIPAPF 255 Query: 221 PDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIGKDILRFHA 272 P +YVW +A+ Y++ T L D + +FW + IGKD + FH Sbjct: 256 PGAEGKTIYVWFEAVLGYVSATIEYFRRLGREDDWR-RFWFNKGTRVVFFIGKDNIPFHT 314 Query: 273 IYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 I +PA L++ + +P S +++ +G+K SKS I E I + D R++L+ Sbjct: 315 IIFPALLMATGEDYVMPWTTSSTEYLIFEGKKFSKSQRVGIWADEAIALLPADYWRFYLI 374 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 +D + D VN+ + + +GN + R +++ + + G +P E D+ I Sbjct: 375 YNRPEQRDSNFTWDSFLDVVNSIMNDTVGNFIHRVLTLAKRRW-GTVPGDVKMIEQDQEI 433 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450 +L + E+ + ++ A++Q I + ++Y + ++PW L + + A +Y+ Sbjct: 434 YGKVLEILNTVEEDYERIMLKDAVSQSIEIARIGNKYLNERQPWRLSEVEFNSA---IYM 490 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477 + +++ L+I L +P N+++ ++ Sbjct: 491 LMSIVKTLSITLAPVIPFSINELWRMM 517 >gi|109940177|sp|Q9ZTS1|SYM_ORYSJ RecName: Full=Probable methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|54290977|dbj|BAD61657.1| methionyl-tRNA synthetase [Oryza sativa Japonica Group] gi|222635658|gb|EEE65790.1| hypothetical protein OsJ_21495 [Oryza sativa Japonica Group] Length = 801 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 123/520 (23%), Positives = 235/520 (45%), Gaps = 57/520 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + +++A+ Y N PH+G+ ++ ADV AR+ RL G +V++ GTDE+G A Sbjct: 15 RRNILVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVIYICGTDEYGTATETKA 74 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + K D+ ++ DI +D F RT+ + + C+ +++K+ + + + Sbjct: 75 MEEKCSPKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVCQAIFQKLMENNWLTEN 134 Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-QYYNAQH--NPVQWMEEEG----- 164 Y + + D V Y+ A G Q N NP + ++ + Sbjct: 135 TMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCKN 194 Query: 165 ---------YFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 F L DKL++Y E+ + +++K GLK ++R Sbjct: 195 TPRVRDTDHLFLELPLLSDKLVNYINETSVAGMWSQNAIQATNAWLKEGLKPRCITRD-L 253 Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDI 267 WG+ +P + + YVW DA Y++ T PD K +W P ++ + +GKD Sbjct: 254 KWGVPVPHEKYKDKVFYVWFDAPIGYVSITASY-TPDWEK--WWKDPDNVELFQFMGKDN 310 Query: 268 LRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEEV 320 + FH + +P+ LL + K + ++ ++ K SKS GN + EV Sbjct: 311 VPFHTVMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKDTNIPPEV 370 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGM 376 RY+L+ D + L+ ++N++L N +GN ++R +S + K YD + Sbjct: 371 ----WRYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSI 426 Query: 377 IP-TPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 +P P A + ++++ ++ +++ E M+ + + L + + S+ + Y + W Sbjct: 427 VPDAPNAESHPLTKALVEKTNKWVEQYLEAMEKVKLKQGLKSAMGISSDGNAYLQESQFW 486 Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +L K +P + V+ +V V+ LA LL+ F+P +N++ Sbjct: 487 KLYKEDPAACAVVMKTSVGVVYLLACLLEPFMPSFSNEVL 526 >gi|126735051|ref|ZP_01750797.1| methionyl-tRNA synthetase [Roseobacter sp. CCS2] gi|126715606|gb|EBA12471.1| methionyl-tRNA synthetase [Roseobacter sp. CCS2] Length = 572 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 121/521 (23%), Positives = 225/521 (43%), Gaps = 47/521 (9%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R G +VLF TDEHG AA A Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLYARYLRQRGHEVLFLCATDEHGTPAELAAAKASK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + +AD +S+D F R++ ++H + +++D G I + Sbjct: 66 PVAEYCAEMHGIQAKIADGFRLSFDHFGRSSSPQNHKLTQAFAMRLADVGLIKEVTEEQV 125 Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM---------------E 161 YS+ D + D E +G Q +P + E Sbjct: 126 YSVADGRFLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPADLIDAHSTISGSTELEVRE 185 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 + + R S +D L ++ +S ++ + + GL+D ++R DWGI + Sbjct: 186 TKHLYLRQSELKDDLAAWIDSKTDWPILTTSIAKKWLTDGDGLQDRGITRD-LDWGIPVK 244 Query: 222 DDPQY-------IMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD--------LHVIG 264 Q + YVW DA Y+ + D G+ A++W D +G Sbjct: 245 QGDQTWPGMEGKVFYVWFDAPIEYIACAQEWEDAGKGTDWARWWRTDKGADDVTYTQFMG 304 Query: 265 KDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 KD + FH + +PA +L + P L + S ++ + G + S S G + + +E + Sbjct: 305 KDNVPFHTLSFPATILGSQEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALELLPA 364 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R++L+ D + + + VN DLA+ +GN VSR + +P GA Sbjct: 365 DYWRWWLLSHAPESSDAEFTWENFQTDVNKDLADVLGNFVSRITKFCRSKFSEAVPEGGA 424 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 + ++E +++ + ++ +M + ++ A++ ++ + Y A PW KT+P+ Sbjct: 425 YGPAEEQLIADLTTRIRAYEGHMDAMEVRKSAAELRAIWVLGNEYLQANAPWTTFKTDPE 484 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 A+ + + + +IR A+L AF+P + + D + D++ Sbjct: 485 TAAMQVRLALNLIRIYAVLSAAFIPDASKTMIDAMQTDDDS 525 >gi|318604995|emb|CBY26493.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica Y11] Length = 616 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 113/447 (25%), Positives = 199/447 (44%), Gaps = 44/447 (9%) Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 AQ G+ + + + S+ + ISYD++ T + + +++ ++ G I Sbjct: 4 AQQLGIEPEEMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYSRLKANGYIKN 63 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM--------- 160 S Y ++ + D KG + + A ++P + + Sbjct: 64 RTISQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSAVSGA 122 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 E E +FF L A+ D L ++ S L + N++ + +SGL+ +SR Sbjct: 123 TPVMRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPY 179 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFW----PADL-HVIGKDIL 268 +G +IPD P YVW+DA Y+ L + G +FW ADL H IGKDI+ Sbjct: 180 FGFEIPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWRKDSEADLYHFIGKDIV 239 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH+++WPA L +N P +F HG++ G K+SKS G I ++ + D LRY+ Sbjct: 240 YFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKHLDADCLRYY 299 Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 +++ D + + +RVNAD+ N + NL SR+ I K + G + A +D Sbjct: 300 YAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGKL----ADHLAD 355 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--S 445 ++ + I + N+ +A+ ++++L +RY D Q PW + K A Sbjct: 356 PALYKTFTDAATSIADTYSNRESSKAIREIMALADIANRYVDEQAPWVVAKEEGRDADLQ 415 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472 + + + + R L L+ +P L + Sbjct: 416 AICSMGINLFRVLMTYLKPVLPALTER 442 >gi|294813511|ref|ZP_06772154.1| Methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294326110|gb|EFG07753.1| Methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] Length = 579 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 134/508 (26%), Positives = 222/508 (43%), Gaps = 47/508 (9%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N H+G+ M+ AD +R+ R G DVL+ TDEHG AA+ AG+ Sbjct: 11 ITSALPYINGIKHLGNMVGSMLPADAYSRYLRQRGHDVLYICATDEHGTPAELAAKEAGL 70 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F Q + + D ++++D F R++ +++ + + +K+ + G I + Sbjct: 71 SVAEFCAQAHVAQKAVYDGFELAFDYFGRSSSQQNSEITQHFARKLHENGFIEERAIRQV 130 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL-LSYYE 181 YS D + D V Y G D + N + ++ SA L E Sbjct: 131 YSPADGRFLPDRYVVGTCPYCGYDKARGDQCENCTRVLDPTDLVNPRSAISGSTDLEVRE 190 Query: 182 SHPEFILPIERRNEVISFVKS-------------------GLKDLSLSRKTFDWGIKIPD 222 + F+L + + EV ++ S GL D +++R DWGI +P Sbjct: 191 TKHLFLLQSKLQREVEEWIDSVSAQWPQLSTSIARKWLTEGLHDRAITRD-LDWGIPVPA 249 Query: 223 DP-------QYIMYVWIDALTNYLTTTGYLDN--PDGS----KAKFWPADLHV-----IG 264 D + YVW DA Y+ T + PDG K+ ++ AD V + Sbjct: 250 DTWPDLAAEGKVFYVWFDAPIEYIAATKEWSDAAPDGETRDWKSWWYEADDTVHYSQFMA 309 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEEVGV 322 KD + FH + +PA L P K GF + + G K S S + +E + Sbjct: 310 KDNVPFHTVMFPATELGVREPWKKVDVVKGFNWLTYYGGKFSTSQKRGVFTDAALETLPG 369 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D RYFL+ D + + VN DLA+ +GN V+R +S K + +P Sbjct: 370 DYWRYFLLANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFGDEVPEGNH 429 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 E++ + +R+L E E+M+ +A A + +L S + Y + + PW KT+PD Sbjct: 430 AGEAEAKLGEELARLLAEYEEHMETLQFRKAAAALRALWSAGNSYLEEKAPWLEIKTDPD 489 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLA 470 A+ L + +I AI+ + F+P A Sbjct: 490 GAALTLRTAMNLIHLYAIVSEPFIPATA 517 >gi|254390056|ref|ZP_05005277.1| methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|326442082|ref|ZP_08216816.1| methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|197703764|gb|EDY49576.1| methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] Length = 574 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 134/508 (26%), Positives = 222/508 (43%), Gaps = 47/508 (9%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N H+G+ M+ AD +R+ R G DVL+ TDEHG AA+ AG+ Sbjct: 6 ITSALPYINGIKHLGNMVGSMLPADAYSRYLRQRGHDVLYICATDEHGTPAELAAKEAGL 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F Q + + D ++++D F R++ +++ + + +K+ + G I + Sbjct: 66 SVAEFCAQAHVAQKAVYDGFELAFDYFGRSSSQQNSEITQHFARKLHENGFIEERAIRQV 125 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL-LSYYE 181 YS D + D V Y G D + N + ++ SA L E Sbjct: 126 YSPADGRFLPDRYVVGTCPYCGYDKARGDQCENCTRVLDPTDLVNPRSAISGSTDLEVRE 185 Query: 182 SHPEFILPIERRNEVISFVKS-------------------GLKDLSLSRKTFDWGIKIPD 222 + F+L + + EV ++ S GL D +++R DWGI +P Sbjct: 186 TKHLFLLQSKLQREVEEWIDSVSAQWPQLSTSIARKWLTEGLHDRAITRD-LDWGIPVPA 244 Query: 223 DP-------QYIMYVWIDALTNYLTTTGYLDN--PDGS----KAKFWPADLHV-----IG 264 D + YVW DA Y+ T + PDG K+ ++ AD V + Sbjct: 245 DTWPDLAAEGKVFYVWFDAPIEYIAATKEWSDAAPDGETRDWKSWWYEADDTVHYSQFMA 304 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEEVGV 322 KD + FH + +PA L P K GF + + G K S S + +E + Sbjct: 305 KDNVPFHTVMFPATELGVREPWKKVDVVKGFNWLTYYGGKFSTSQKRGVFTDAALETLPG 364 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D RYFL+ D + + VN DLA+ +GN V+R +S K + +P Sbjct: 365 DYWRYFLLANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFGDEVPEGNH 424 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 E++ + +R+L E E+M+ +A A + +L S + Y + + PW KT+PD Sbjct: 425 AGEAEAKLGEELARLLAEYEEHMETLQFRKAAAALRALWSAGNSYLEEKAPWLEIKTDPD 484 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLA 470 A+ L + +I AI+ + F+P A Sbjct: 485 GAALTLRTAMNLIHLYAIVSEPFIPATA 512 >gi|221639859|ref|YP_002526121.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides KD131] gi|254782870|sp|B9KKH3|SYM_RHOSK RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|221160640|gb|ACM01620.1| Methionyl-tRNA synthetase [Rhodobacter sphaeroides KD131] Length = 572 Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 113/524 (21%), Positives = 228/524 (43%), Gaps = 49/524 (9%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++AI Y N H+G+ + AD+ AR+ R G +V+F TDEHG AA Sbjct: 3 RILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + + + +++A +S+D F R++ R+H + +++ G I + Sbjct: 63 AGKPVEDYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALAENGFIEEVVE 122 Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNP---------------VQ 158 ++S+ D + D + +G + Q +P ++ Sbjct: 123 RQFFSVADNRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTELE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E + + R A +D++ ++ +S ++ + + GL+D ++R WG+ Sbjct: 183 LRETKHLYLRQRALKDEIEAWIDSKTDWPVLTTSIAKKWLHDGEGLQDRGITRD-LKWGV 241 Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD-------- 259 + P + YVW DA Y+ T + +G ++W D Sbjct: 242 PVRKGSEPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKADADWERWWRTDRGAEDVRY 301 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 + +GKD + FH + +PA ++ + P L + S ++ + G + S S G + + + Sbjct: 302 VQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 361 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 + D R++L+ D + + + VN DLA+ +GNLVSR + + Sbjct: 362 SILPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNLVSRVTKFCRSKFGETV 421 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G+ E + +++ + L M+ + +A A++ +L + Y + PW + Sbjct: 422 PAGGSPGEREHQLVAELQQQLAAYETCMEAMEVRKAAAELRALWVAGNEYLQSAAPWTVV 481 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 KT+P++A ++ + + +IR A++ + F+P A + L D Sbjct: 482 KTDPEQAQAMIRLALNLIRLYAVISRPFIPDAAASMMASLGCED 525 >gi|167386989|ref|XP_001737980.1| methionine-tRNA synthetase [Entamoeba dispar SAW760] gi|165899002|gb|EDR25712.1| methionine-tRNA synthetase, putative [Entamoeba dispar SAW760] Length = 753 Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 123/507 (24%), Positives = 233/507 (45%), Gaps = 47/507 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G ++ ADV AR+ R+ G + L+ GTDE+G + A Sbjct: 16 ILITSALPYCNNVPHLGTLIGCVLSADVYARYCRMRGYNTLYVCGTDEYGTTTEQKALLE 75 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 T + D+ +++ D DIS++ F RT+ ++ + + ++K +++ G IYK Sbjct: 76 HCTPQEICDKYYTLHKEVYDWFDISFNYFGRTSTEKQTEITQDIFKHLNNNGYIYKESVE 135 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161 +Y + + + D V GA G ++ + +E Sbjct: 136 QFYCEKCDKFLADRFVEGICPFCNAPGARGDQCDSCQKLINTVELINPQCKVCHSVPVRR 195 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WGI 218 E F L QDKL ++ E + E N K+ L +L T D WG Sbjct: 196 SSEHLFIDLPKLQDKLGNWAN---ETMSKYEWPNNCACATKTWLNNLKGRCITRDLKWGT 252 Query: 219 KIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDILRF 270 K+P + + YVW DA YL+ T Y D+ K+W + HV +GKD + F Sbjct: 253 KVPLEGFENKVFYVWFDAPIGYLSITANYTDD----WKKWWMDNEHVELTQFLGKDNIVF 308 Query: 271 HAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327 H++ +P+ LL P + +K+ + ++ ++ K SKS G + + ++ + + RY Sbjct: 309 HSVLFPSTLLGTGQPWTMVRKLATTEYLNYEDCKFSKSNGTGVFGDDAMKTGIPPEVWRY 368 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTES 386 +L+ D + + L ++ N +L IGNL R+++ +K++D IP TE Sbjct: 369 YLLINRPEQSDTVFLWNDLMEKNNNELLKNIGNLAQRTLTFAVKNFDNKIPKKINKITEV 428 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 + + + +E M+N + L +S+ S ++Y W+ K++ +RA+ Sbjct: 429 ELNCEKEIKELYKEYLNAMENVKLKEGLKIAMSISSVGNKYLQDTAAWKTIKSDKERAAD 488 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKI 473 +Y + ++ ++++L ++P+ K+ Sbjct: 489 EIYYALNILYFVSLVLDPYIPEFGKKV 515 >gi|218198281|gb|EEC80708.1| hypothetical protein OsI_23153 [Oryza sativa Indica Group] Length = 804 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 123/520 (23%), Positives = 234/520 (45%), Gaps = 57/520 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + +++A+ Y N PH+G+ ++ ADV AR+ RL G +V++ GTDE+G A Sbjct: 18 RRNILVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVIYICGTDEYGTATETKA 77 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + K D+ ++ DI +D F RT+ + + C+ +++K+ + + + Sbjct: 78 MEEKCSPKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVCQAIFQKLMENNWLTEN 137 Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-QYYNAQH--NPVQWMEEEG----- 164 Y + + D V Y+ A G Q N NP + ++ + Sbjct: 138 TMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCKN 197 Query: 165 ---------YFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 F L DKL++Y E+ + +++K GLK ++R Sbjct: 198 TPRVRDTDHLFLELPLLSDKLVNYINETSVAGMWSQNAIQATNAWLKEGLKPRCITRD-L 256 Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDI 267 WG+ +P + + YVW DA Y++ T PD K +W P ++ + +GKD Sbjct: 257 KWGVPVPHEKYKDKVFYVWFDAPIGYVSITASY-TPDWEK--WWKDPDNVELFQFMGKDN 313 Query: 268 LRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEEV 320 + FH + +P+ LL + K + ++ ++ K SKS GN + EV Sbjct: 314 VPFHTVMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKDTNIPPEV 373 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGM 376 RY+L+ D + L+ ++N++L N +GN ++R +S + K YD + Sbjct: 374 ----WRYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSI 429 Query: 377 IP-TPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 +P P A + +++ ++ +++ E M+ + + L + + S+ + Y + W Sbjct: 430 VPDAPNAESHPLTKALAEKTNKWVEQYLEAMEKVKLKQGLKSAMGISSDGNAYLQESQFW 489 Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +L K +P + V+ +V V+ LA LL+ F+P +N++ Sbjct: 490 KLYKEDPAACAVVMKTSVGVVYLLACLLEPFMPSFSNEVL 529 >gi|4091008|gb|AAC99620.1| methionyl-tRNA synthetase [Oryza sativa] Length = 804 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 123/520 (23%), Positives = 234/520 (45%), Gaps = 57/520 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + +++A+ Y N PH+G+ ++ ADV AR+ RL G +V++ GTDE+G A Sbjct: 18 RRNILVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVIYICGTDEYGTATETKA 77 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + K D+ ++ DI +D F RT+ + + C+ +++K+ + + + Sbjct: 78 MEEKCSPKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVCQAIFQKLMENNWLTEN 137 Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-QYYNAQH--NPVQWMEEEG----- 164 Y + + D V Y+ A G Q N NP + ++ + Sbjct: 138 TMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCKN 197 Query: 165 ---------YFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 F L DKL++Y E+ + +++K GLK ++R Sbjct: 198 TPRVRDTDHLFLELPLLSDKLVNYINETSVAGMWSQNAIQATNAWLKEGLKPRCITRD-L 256 Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDI 267 WG+ +P + + YVW DA Y++ T PD K +W P ++ + +GKD Sbjct: 257 KWGVPVPHEKYKDKVFYVWFDAPIGYVSITASY-TPDWEK--WWKDPDNVELFQFMGKDN 313 Query: 268 LRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEEV 320 + FH + +P+ LL + K + ++ ++ K SKS GN + EV Sbjct: 314 VPFHTVMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKDTNIPPEV 373 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGM 376 RY+L+ D + L+ ++N++L N +GN ++R +S + K YD + Sbjct: 374 ----WRYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSI 429 Query: 377 IP-TPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 +P P A + +++ ++ +++ E M+ + + L + + S+ + Y + W Sbjct: 430 VPDAPNAESHPLTKALAEKTNKWVEQYLEAMEKVKLKQGLKSAMGISSDGNAYLQESQFW 489 Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +L K +P + V+ +V V+ LA LL+ F+P +N++ Sbjct: 490 KLYKEDPAACAVVMKTSVGVVYLLACLLEPFMPSFSNEVL 529 >gi|18313703|ref|NP_560370.1| methionyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2] gi|25009379|sp|Q8ZU56|SYM_PYRAE RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|18161256|gb|AAL64552.1| methionyl-tRNA synthetase alpha subunit [Pyrobaculum aerophilum str. IM2] Length = 570 Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 127/511 (24%), Positives = 229/511 (44%), Gaps = 44/511 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K I +A Y PH+G+ ++ ADV AR+ RL G +V+F +G+D HG + A Sbjct: 3 KYVIGSAWPYVQTVPHLGNMIGSVLSADVYARYLRLKGHEVVFVSGSDVHGTPVEVEAIQ 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV + + ++ +IS+D + T + H + + KI + G I+ Sbjct: 63 LGVDPAEYSMKMHAIVAELFKKWNISFDLYTHTHSETHIKFVQDFYLKIYENGYIFTKED 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQ--------------W 159 Y RD+ Y D + Y+ A G Q N +P Q W Sbjct: 123 EVPYCPRDKIYLPDRFIIGKCPYCGYERARGDQCENCGRLLDPKQLIEPKCAVCGSKPEW 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + ++ L +D++ Y E +P LP + ++ +K GL+ +++R WGI Sbjct: 183 RITKHWYLDLRRLEDRIRKYVEENPH--LPPNAKEMSLAMLKEGLRPRAVTRDN-KWGIP 239 Query: 220 --IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFW--PAD--LHVIGKDILRF 270 P +YVW +A+ Y++ G + +FW P + +GKD + F Sbjct: 240 APFPGAEGKTIYVWFEAVLGYISAVVEYFKKIGREEEWKRFWLDPETKVVFFVGKDNVPF 299 Query: 271 HAIYWPAFLLS--ANLPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDALR 326 H I PA LL+ +P S ++L++G+K SKS G ID E ++ + D R Sbjct: 300 HVIILPALLLANGGGYVMPTTTASTEYLLYEGDKFSKSRRWGVWID--EALQLLPADYWR 357 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + L+ +D + + +N L + +GN +R +S I G +P G + Sbjct: 358 FVLIYIRPENRDTNFSWSTALEIINKVLNDDVGNYANRVLSFIKNRMGGAVPPRGKPSRD 417 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 DE + R+ ++ + + + A+ V+ + E ++Y +A+ PW+L K + D A+ Sbjct: 418 DEEFIEKVKRLFEKAEAHYEAIELKDAVHTVVEIAREGNKYLNARAPWDLVKKDVDAANA 477 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V+Y ++ LA+ L +P+ A +++ ++ Sbjct: 478 VMYHAYWSLKFLAVGLAPAIPESAEQLWKMM 508 >gi|149179757|ref|ZP_01858262.1| methionyl-tRNA synthetase [Bacillus sp. SG-1] gi|148851949|gb|EDL66094.1| methionyl-tRNA synthetase [Bacillus sp. SG-1] Length = 549 Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 124/509 (24%), Positives = 223/509 (43%), Gaps = 57/509 (11%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR+HRL G DVL+ +G+D +G I A G Sbjct: 12 VFIGGAWPYANGSLHVGHLAALLPGDILARYHRLKGEDVLYVSGSDCNGTPIEIRAHQEG 71 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126 V + D+ + F D L SYD + RT HH + ++ + D G +Y+ Sbjct: 72 VKVRDIADRYHQEFLDCFQKLGFSYDQYGRTDSANHHQEVQKIFLTLKDNGFLYEKTTEE 131 Query: 127 WYSLRDEAYYND----------DEVYKG--ADG------------QYYNAQHNPVQWMEE 162 + L + + D +E +G DG ++ NP ++E Sbjct: 132 TFCLHCDRFLPDRFVEGTCPNCNEKARGDQCDGCGTILDPRELIDRHCKLCGNPPS-LKE 190 Query: 163 EGYFFRLSA--------YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 +F+ + Y +K + + E + RR ++ GL D + +R Sbjct: 191 TAHFYLALSLLEEELKDYLNKNKGKWRENAE---ALTRR-----YINEGLHDRAATRDIG 242 Query: 215 DWGIKIP----DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADL---HVIGKD 266 G+ +P +D + +YVWI+A++ YLT + + + + KFW + +V GKD Sbjct: 243 T-GVDVPVEGYNDKK--IYVWIEAVSGYLTGSIEWGEKHERDWRKFWDKEAVSYYVHGKD 299 Query: 267 ILRFHAIYWPAFLLSANL-PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 + FH I WPA L N LP + S ++ + +KIS S + +V+++ D L Sbjct: 300 NIPFHTIIWPAILKGLNSDGLPDWIVSSEYVTLEKKKISTSKDWAVWLPDVLKDYHPDTL 359 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 RY+ +D + + N++L +GN + R+V K++ Sbjct: 360 RYYFSANYPDKRDADFSWREFILKHNSELVGSLGNFIQRTVKFYRKEFG----ESAVLET 415 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 D ++ V ++ E ++ +A + +V ++YFD ++PW + K + + A Sbjct: 416 IDPIVVRELYTVFRQTGELIEEGECRKAAKRAFEIVRWGNKYFDDKQPWRVIKEDRNEAR 475 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +L + + L+ LL F+P A +I Sbjct: 476 FILESCLYISINLSQLLSPFIPFSAEEIL 504 >gi|257053975|ref|YP_003131808.1| methionyl-tRNA synthetase [Halorhabdus utahensis DSM 12940] gi|256692738|gb|ACV13075.1| methionyl-tRNA synthetase [Halorhabdus utahensis DSM 12940] Length = 697 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 118/507 (23%), Positives = 210/507 (41%), Gaps = 53/507 (10%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N HIGH + DVL R G F +G+D HG IA A + Sbjct: 14 VTCGLPYANGDLHIGHLRTYVGGDVLTRSLEKLGQQTAFVSGSDMHGTPIAVQAIEDDID 73 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + F + + + D+ +D++ T ++ + + + + + G + + + Sbjct: 74 PEAFALEYHEQYEETFPEFDVDFDNYGHTHQETNRELTHEIVEALEAAGYVDEQEIKVAW 133 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQH---------------NPVQWMEEE 163 D+ D E +G + +H NP ++ E Sbjct: 134 DPEDDQPLPDRYVVGTCPYCGETARGDECDEGCGRHLEPGEIEDPVSKISGNPAEYRERT 193 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-- 221 FF +S D L + + +N+ +++ GL+D ++R DWG P Sbjct: 194 HKFFEVSKLADYLSGFLDR---LEGTANAKNQPRQWIEEGLQDWCITRD-MDWGFDYPEV 249 Query: 222 ----DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-------LHVIGKDIL 268 DD ++YVW+DA Y+ +T + G +A W +HVIG+DI+ Sbjct: 250 DDTGDDTAEDLVLYVWVDAPIEYIASTKQYTDRVGPEAYDWAETWKESGEIIHVIGRDII 309 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327 + H I+WPA L A P+ V + GF+ G+ S S I E ++E D LRY Sbjct: 310 QHHTIFWPAMLHVAEFNEPRAVVASGFMSLDGDAFSTSRNRAIWAREYLDEGFHPDLLRY 369 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 +L D + D ++RVN +L +GN RS+ ++Y G TP A D Sbjct: 370 YLTTVGGFQDDIDFSWDRFRERVNGELVGTVGNFAYRSLLFADRNYGG---TPDADLSPD 426 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 + +++ + + I +A + L S + Y +PW L + D A+ + Sbjct: 427 --VEDRIEDAIEDFEAGVNDYSIRKATQAAVELASFGNEYIQRHEPWNL---DDDEAAPI 481 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIF 474 + V++ + +A+LLQ P + +++ Sbjct: 482 IRDCVQIAKAVAVLLQPTTPDTSRRLW 508 >gi|326528397|dbj|BAJ93387.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 801 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 129/531 (24%), Positives = 240/531 (45%), Gaps = 54/531 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + I++A+ Y N PH+G+ ++ ADV AR+ RL G + ++ GTDE+G A Sbjct: 19 RRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETKA 78 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + K D+ ++ DI +D F RT+ + C+ ++ K+ + + + Sbjct: 79 LEEKCSPKEICDKYHVIHDEVYKWFDIKFDKFGRTSAPEQTEVCQAIFHKLMENKWLTEN 138 Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-QYYNAQH--NPVQWMEEEG----- 164 Y E + D V Y+ A G Q N NP + ++ + Sbjct: 139 TMQQLYCDTCERFLADRLVEGRCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCKN 198 Query: 165 ---------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---FVKSGLKDLSLSRK 212 F L DKL++Y + + + +N + + ++K GLK ++R Sbjct: 199 APRIRDTDHLFLELPLLSDKLVNYINNTS--VAGMWSQNAIQATNAWLKEGLKQRCITRD 256 Query: 213 TFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGK 265 WG+ +P + + YVW DA Y++ T PD K +W P ++ + +GK Sbjct: 257 -LKWGVPVPHEKYKDKVFYVWFDAPIEYISITASY-TPDWEK--WWKDPDNVELFQFMGK 312 Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322 D + FH + +P+ LL N + K + ++ ++ K SKS G V I + Sbjct: 313 DNVPFHTVMFPSTLLGTGENWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKITNIPS 372 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP 378 + RY+L+ D + L+ ++N++L N +GN ++R +S + K YD +IP Sbjct: 373 EVWRYYLLMNRPEVSDTLFTWVDLQAKLNSELLNNLGNFINRVLSFVAKPAGGGYDSIIP 432 Query: 379 -TPGAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 P A + + L+ ++ ++ E M+ + + L +++ S+ + Y + W L Sbjct: 433 DAPNAESHPLTNTLAEKTNKWVEHYLEAMEKVKLKQGLKSAMAISSDGNAYLQESQFWRL 492 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-DENRCF 486 K +P + V+ +V V+ LA LL+ F+P + ++ L ++ DE+ F Sbjct: 493 YKEDPATCAIVMKTSVGVVYLLACLLEPFMPSFSREVLHQLNMSPDEDLSF 543 >gi|326506100|dbj|BAJ91289.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 801 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 129/531 (24%), Positives = 240/531 (45%), Gaps = 54/531 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + I++A+ Y N PH+G+ ++ ADV AR+ RL G + ++ GTDE+G A Sbjct: 19 RRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETKA 78 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + K D+ ++ DI +D F RT+ + C+ ++ K+ + + + Sbjct: 79 LEEKCSPKEICDKYHVIHDEVYKWFDIKFDKFGRTSAPEQTEVCQAIFHKLMENKWLTEN 138 Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-QYYNAQH--NPVQWMEEEG----- 164 Y E + D V Y+ A G Q N NP + ++ + Sbjct: 139 TMQQLYCDTCERFLADRLVEGRCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCKN 198 Query: 165 ---------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---FVKSGLKDLSLSRK 212 F L DKL++Y + + + +N + + ++K GLK ++R Sbjct: 199 APRIRDTDHLFLELPLLSDKLVNYINNTS--VAGMWSQNAIQATNAWLKEGLKQRCITRD 256 Query: 213 TFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGK 265 WG+ +P + + YVW DA Y++ T PD K +W P ++ + +GK Sbjct: 257 -LKWGVPVPHEKYKDKVFYVWFDAPIGYISITASY-TPDWEK--WWKDPDNVELFQFMGK 312 Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322 D + FH + +P+ LL N + K + ++ ++ K SKS G V I + Sbjct: 313 DNVPFHTVMFPSTLLGTGENWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKITNIPS 372 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP 378 + RY+L+ D + L+ ++N++L N +GN ++R +S + K YD +IP Sbjct: 373 EVWRYYLLMNRPEVSDTLFTWVDLQAKLNSELLNNLGNFINRVLSFVAKPAGGGYDSIIP 432 Query: 379 -TPGAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 P A + + L+ ++ ++ E M+ + + L +++ S+ + Y + W L Sbjct: 433 DAPNAESHPLTNTLAEKTNKWVEHYLEAMEKVKLKQGLKSAMAISSDGNAYLQESQFWRL 492 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-DENRCF 486 K +P + V+ +V V+ LA LL+ F+P + ++ L ++ DE+ F Sbjct: 493 YKEDPATCAIVMKTSVGVVYLLACLLEPFMPSFSREVLHQLNMSPDEDLSF 543 >gi|126462842|ref|YP_001043956.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] gi|187647760|sp|A3PLG8|SYM_RHOS1 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|126104506|gb|ABN77184.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] Length = 572 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 112/524 (21%), Positives = 228/524 (43%), Gaps = 49/524 (9%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++AI Y N H+G+ + AD+ AR+ R G +V+F TDEHG AA Sbjct: 3 RILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + + + +++A +S+D F R++ R+H + +++ G I + Sbjct: 63 AGKPVEDYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALAENGFIEEVVE 122 Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNP---------------VQ 158 ++S+ D + D + +G + Q +P ++ Sbjct: 123 RQFFSVADNRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTELE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E + + R A +D++ ++ +S ++ + + GL+D ++R WG+ Sbjct: 183 LRETKHLYLRQRALKDEIEAWIDSKTDWPVLTTSIAKKWLHDGEGLQDRGITRD-LKWGV 241 Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD-------- 259 + P + YVW DA Y+ T + +G ++W D Sbjct: 242 PVRKGSEPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKTDADWERWWRTDRGAEDVRY 301 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 + +GKD + FH + +PA ++ + P L + S ++ + G + S S G + + + Sbjct: 302 VQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 361 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 + D R++L+ D + + + VN DLA+ +GNLVSR + + Sbjct: 362 SILPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNLVSRVTKFCRSKFGETV 421 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G+ E + +++ + L M+ + +A +++ +L + Y + PW + Sbjct: 422 PAGGSPGEREHQLVAELQQRLAAYEACMEAMEVRKAASELRALWVAGNEYLQSAAPWTVV 481 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 KT+P++A ++ + + +IR A++ + F+P A + L D Sbjct: 482 KTDPEQAQAMIRLALNLIRLYAVISRPFIPDAAASMMTSLGCED 525 >gi|325916608|ref|ZP_08178871.1| methionyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937] gi|325537162|gb|EGD08895.1| methionyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937] Length = 696 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 128/498 (25%), Positives = 207/498 (41%), Gaps = 46/498 (9%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R RL G F D HG I AA+ AGVT Sbjct: 7 VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66 Query: 69 TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A +++D + T + + + K+ G I + + + Sbjct: 67 PEAFIANIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYSKLEAAGHISRRSVAQF 125 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162 Y + D + G+ QY A + P + E Sbjct: 126 YDPAKGMFLPDRYIKGICPNCGSPDQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 E +FF + + L + + LP ++ + + + GL+ +SR +G +IP Sbjct: 186 EHFFFEVGHFDGFLREWLAG--DVALPGVKAKLKEWLDTEGGLRAWDISRDAPYFGFQIP 243 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLHVIGKDILRFHAIYW 275 P YVW+DA YL + L G A H IGKDI+ FH ++W Sbjct: 244 GRPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFDTHLVAGTQTELHHFIGKDIVNFHGLFW 303 Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREI 333 PA L P ++ +G++ G K+SKS G + +VG+ +ALRY+ + Sbjct: 304 PAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKS 362 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 + G D + RVNADL NL SR I K ++G + A D++ Sbjct: 363 SGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFEGKL----ADALPDQAQYD 418 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450 L IR+ + A+ Q ++L E ++Y D KPW + K + A +V Sbjct: 419 RFVAALAPIRDAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCTQ 478 Query: 451 TVEVIRQLAILLQAFVPK 468 + + R L L+ +P+ Sbjct: 479 GLNLFRILVAGLKPILPR 496 >gi|307718042|ref|YP_003873574.1| methionyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] gi|306531767|gb|ADN01301.1| methionyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] Length = 719 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 124/516 (24%), Positives = 223/516 (43%), Gaps = 56/516 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++K I++A+ Y N PH+G+ +++ ADV AR+ R G + L+ GTDE+G A Sbjct: 2 KKKRLITSALPYVNNVPHLGNLIQVLSADVFARYCRSAGYETLYVCGTDEYGTATETRAL 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ K D+ ++ + +I +D + RT+ H + ++ K+ G I + Sbjct: 62 EEGISPKELCDRFHAIHTEIYEWFEIQFDKWGRTSTPEHTRITQDIFLKLDRNGYIKERT 121 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWMEEEG-------- 164 YS + + D V Y+ A G ++ +P + +E Sbjct: 122 IQQLYSEKSGMFLADRYVRGTCPHCGYEDARGDQCEHCGKLLDPTELIEPRSAIDGSTPV 181 Query: 165 ------YFFRLSAYQDKLLSYYES---HPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 + L A KL ++ E + R E S+++ GL++ ++R Sbjct: 182 LRETKHLYLDLPALLPKLKAWMEKASVEGRWATNAIRMTE--SWIRDGLRERCITRD-LK 238 Query: 216 WGIKIPDDPQY---IMYVWIDALTNYLTTTG--------YLDNPDGSKAKFWPADLHVIG 264 WG+ +P P Y + YVW DA Y++ T + NPDG + IG Sbjct: 239 WGVPVP-KPGYENKVFYVWFDAPIGYISITATYTDRWEEWWKNPDGVEL------YQFIG 291 Query: 265 KDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321 KD + FH + +P+ LL L K + S ++ ++ K SKS G V + Sbjct: 292 KDNIPFHTVIFPSTLLGTGEGWTLLKTMSSTEYLNYESGKFSKSRGVGVFGNDAKDTGIP 351 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D R++L D + +++VN +L NLV+R++S I + Y G IP Sbjct: 352 ADVWRFYLFYNRPETSDYTFTWKDFQEKVNGELIGNFANLVNRTLSFIHRFYQGRIPE-- 409 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 D ++ + +I E ++ + A + +L ++ F A +PW+ + P Sbjct: 410 --APVDTALWGRVRELEGQITEYLERAQLRDAFRTMFALSDLGNKAFQAGEPWKTRTERP 467 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + A +L ++R LAIL+ ++P + +I L Sbjct: 468 EEAEKLLRNLAYLVRDLAILVAPYLPATSRRILGFL 503 >gi|315931151|gb|EFV10124.1| Methionine-tRNA ligase [Campylobacter jejuni subsp. jejuni 327] Length = 187 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 4/189 (2%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PH+GHAY IIAD LARF+RL G + F TGTDEHGQKI +AA+ Sbjct: 3 YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + + D+ S F+ + D +I+YD + RTT+ RH + + ++ K+ KGDIYK Y G Sbjct: 63 TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122 Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187 Y + E+++ ++ D + N ++EE YFF+LS YQDK+L +YE + I Sbjct: 123 YCISCESFFTQSQLIN--DCSCPDCGKNTT-ILKEESYFFKLSKYQDKILQWYEE-KDPI 178 Query: 188 LPIERRNEV 196 LP ++ + Sbjct: 179 LPKNKKTNL 187 >gi|126725226|ref|ZP_01741069.1| methionyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] gi|126706390|gb|EBA05480.1| methionyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] Length = 572 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 122/531 (22%), Positives = 224/531 (42%), Gaps = 61/531 (11%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++AI Y N H+G+ + AD+ ARF R G +V+F TDEHG AA Sbjct: 2 RVLITSAIPYINGIKHLGNLVGSQLPADLYARFMRARGHEVMFLCATDEHGTPAELAATK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG F + +A +S+D F R++ ++ + + K+++ I + Sbjct: 62 AGKPVADFCAEMHEVQATIAKGFGMSFDHFGRSSSPQNRELTQYFAGKLAENDLIAEVTG 121 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWMEEEGYF------- 166 YS D Y D + Y GA G + Q +P +E Sbjct: 122 KQVYSNADGRYLPDRYIEGTCPNCGYDGARGDQCENCTKQLDPTDLLEPRSAISGSTDLE 181 Query: 167 --------FRLSAYQDKLLSYYESH---PEFILPIERRNEVISFVK--SGLKDLSLSRKT 213 R S D+L ++ +S P I R+ +++ GL+D ++R Sbjct: 182 VRDTKHLHLRQSTMVDQLEAWIDSKKDWPTLTTSIARK-----WLRDGDGLQDRGITRD- 235 Query: 214 FDWGIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD--- 259 DWG+ + P + YVW DA Y+ +G ++W D Sbjct: 236 LDWGVPVKNGTEDWPGMEGKVFYVWFDAPIEYIACAAEWAEANGKSEADWQRWWRTDKGA 295 Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVID 312 + +GKD + FH + +P +L +N P L + S F+ + G + S S G I Sbjct: 296 DDVKYVQFMGKDNVPFHTLSFPVTILGSNEPWKLVDYIKSFNFLNYDGGQFSTSKGRGIF 355 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 + +E + D R++L+ D + + + VN DLAN +GN +SR Sbjct: 356 MDQALEILPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLANVLGNFISRITKFCRSK 415 Query: 373 YDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 + +P A + + + + +++E +M+ + ++ + ++ + Y Sbjct: 416 FSEAVPAAPLDAIAQERAGLWASLAPLIKEYETHMEAMEVRKSANTLRAIWVVGNEYLQN 475 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 PW + KT+P+ A+ +++V++ +IR A++ F+P A ++ D + D Sbjct: 476 TAPWTVNKTDPEAAAAIVHVSLNLIRLFAVVSSPFIPHAAQQMMDDMHTDD 526 >gi|77463998|ref|YP_353502.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1] gi|123757747|sp|Q3J0T3|SYM_RHOS4 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|77388416|gb|ABA79601.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1] Length = 572 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 112/524 (21%), Positives = 228/524 (43%), Gaps = 49/524 (9%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++AI Y N H+G+ + AD+ AR+ R G +V+F TDEHG AA Sbjct: 3 RILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + + + +++A +S+D F R++ R+H + +++ G I + Sbjct: 63 AGKPVEDYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALAENGFIEEVVE 122 Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNP---------------VQ 158 ++S+ D + D + +G + Q +P ++ Sbjct: 123 RQFFSVADNRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTELE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E + + R A +D++ ++ +S ++ + + GL+D ++R WG+ Sbjct: 183 LRETKHLYLRQRALKDEIEAWIDSKTDWPVLTTSIAKKWLHDGEGLQDRGITRD-LKWGV 241 Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD-------- 259 + P + YVW DA Y+ T + +G ++W D Sbjct: 242 PVRKGSEPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKADADWERWWRTDRGAEDVRY 301 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 + +GKD + FH + +PA ++ + P L + S ++ + G + S S G + + + Sbjct: 302 VQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 361 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 + D R++L+ D + + + VN DLA+ +GNLVSR + + Sbjct: 362 SILPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNLVSRVTKFCRSKFGETV 421 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G+ E + +++ + L M+ + +A +++ +L + Y + PW + Sbjct: 422 PAGGSPGEREHQLVAELQQRLAAYEACMEAMEVRKAASELRALWVAGNEYLQSAAPWTVV 481 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 KT+P++A ++ + + +IR A++ + F+P A + L D Sbjct: 482 KTDPEQAQAMIRLALNLIRLYAVISRPFIPDAAASMMASLGCED 525 >gi|292654972|ref|YP_003534869.1| methionyl-tRNA synthetase [Haloferax volcanii DS2] gi|291371457|gb|ADE03684.1| methionyl-tRNA synthetase [Haloferax volcanii DS2] Length = 740 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 122/548 (22%), Positives = 224/548 (40%), Gaps = 88/548 (16%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N HIGH + D+ +R R G F +G+D HG +A A+ GVT Sbjct: 14 VTCGLPYANGDLHIGHLRTYVGGDIYSRSLRTLGQQTAFVSGSDMHGTPVAVNAEKEGVT 73 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + F ++ + +I +D++ T ++ + + + + + + +G +Y+ Y Sbjct: 74 PEEFALRHHEKYEATFPRFNIEFDNYGHTHDETNTELTQEIVRTLEAEGYVYEKEIPVAY 133 Query: 129 S------LRDE----------AYYNDDEVYKGADGQYYNAQH----------NPVQWMEE 162 L D A+ DE +G G++ NP ++ E Sbjct: 134 DPDADQWLPDRFVEGACPYCGAHARGDECDEGC-GRHLEPGEIEDPTSTLTGNPAEYRER 192 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIE----RRNEVISFVKSGLKDLSLSRKTFDWGI 218 E FF +S QD L EFI +E RN+ +++ L+D ++R DWGI Sbjct: 193 EHKFFAVSDLQDYLQ-------EFIDRLEGTSNARNQPREWIEGELQDWCITRD-MDWGI 244 Query: 219 KIP------DDPQ-------------------------YIMYVWIDALTNYLTTTGYLDN 247 P +D + ++YVW+DA Y+++T Sbjct: 245 DYPGVSESAEDSEADQTESGRDEGDESDGSSSPSGTSDLVLYVWVDAPVEYVSSTKQYTE 304 Query: 248 PDGSKAKFWPAD-------LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 G+ W +H+IG+DI++ H ++WPA L A P+ V + GFI G Sbjct: 305 RVGADTFDWEVAWKDAGDIVHIIGRDIIQHHTVFWPAMLRGAGYVEPRAVMASGFITLNG 364 Query: 301 EKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 + S S + E ++E D LRY+L +D + K RVN++L +G Sbjct: 365 KGFSTSRNRAVWADEYLDEGFHPDLLRYYLATNGGFQQDVDFSWSKFKDRVNSELVGTVG 424 Query: 360 NLVSRSVSMILKDYDGM----------IPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 N + RS+ ++++G T E E + + + E + + Sbjct: 425 NFLYRSMLFAYRNFEGTPDVSELHSEASETGSRAAEVSEEVEARIEEAIDEFEAGINDYS 484 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 + ++ + L + Y +PW+L +P+ A+ V+ V++ + +A+L P Sbjct: 485 VRKSGNAAVRLAQFGNEYIQRNEPWKLTDEDPEAAAQVIRDCVQIAKAIAVLFFPVAPGK 544 Query: 470 ANKIFDIL 477 +++ L Sbjct: 545 MQALWEQL 552 >gi|226330823|ref|ZP_03806341.1| hypothetical protein PROPEN_04744 [Proteus penneri ATCC 35198] gi|225201618|gb|EEG83972.1| hypothetical protein PROPEN_04744 [Proteus penneri ATCC 35198] Length = 541 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/322 (29%), Positives = 159/322 (49%), Gaps = 17/322 (5%) Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E E YFF L A+ + L + S L + N++ + SGL+ ++R +G +I Sbjct: 53 ETEHYFFDLPAFSNMLQEWIRSG---ALQEQVANKMQEWFDSGLQQWDITRDAPYFGFEI 109 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW----PADL-HVIGKDILRFHAI 273 PD P YVW+DA Y+++ L G S +FW ADL H IGKDI+ FH++ Sbjct: 110 PDAPGKYFYVWLDAPIGYMSSFLNLCEKRGDLSFDEFWNKDSKADLYHFIGKDIVYFHSL 169 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L + P +F HG++ G K+SKS G I ++ D LRY+ ++ Sbjct: 170 FWPAMLEGSEYRKPTNLFVHGYVTVNGAKMSKSRGTFITARAYLDHFDADCLRYYYAAKL 229 Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 + D + + +RVN+D+ N + NL SR+ I K +DG + A + D + Sbjct: 230 SSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRTAGFISKRFDGKL----ADSLDDAKLYQ 285 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450 + + I ++ +N+ +A+ ++++L E +RY D + PW + K A + + Sbjct: 286 HFVDMKETIAQSFENREFGKAVREIMALADEANRYIDEKAPWVVAKQEGQDAQLQAICTM 345 Query: 451 TVEVIRQLAILLQAFVPKLANK 472 + + R L L+ +P L + Sbjct: 346 GINLFRVLMTYLKPVLPSLTER 367 >gi|315274506|ref|ZP_07869420.1| methionyl-tRNA synthetase [Listeria marthii FSL S4-120] gi|313615865|gb|EFR89079.1| methionyl-tRNA synthetase [Listeria marthii FSL S4-120] Length = 153 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 65/150 (43%), Positives = 99/150 (66%), Gaps = 3/150 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E+ YI+T I YP+ + HIGHAY + D +AR+ RL G DV + TGTDEHGQKI Sbjct: 4 EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A+ G++ + +VD+ + F+++ L+IS DFIRTT+ RH + +++++ +GDIY Sbjct: 64 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLVQGDIYL 123 Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQ 148 G Y GWYS+ DE Y+ + +EVYK +G+ Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGK 153 >gi|119384777|ref|YP_915833.1| methionyl-tRNA synthetase [Paracoccus denitrificans PD1222] gi|187647740|sp|A1B3P3|SYM_PARDP RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|119374544|gb|ABL70137.1| methionyl-tRNA synthetase [Paracoccus denitrificans PD1222] Length = 572 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 120/526 (22%), Positives = 228/526 (43%), Gaps = 55/526 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R +V+F TDEHG AA AG Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLYARYLRGRDNEVMFICATDEHGTPAELAAAKAGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 V+ + ++A +S+D F R++ +R+H + K+ + G I + Sbjct: 66 PIAVYCAEMHEVQAEIARNFGLSFDHFGRSSSERNHVLTQHFAGKLDENGYIAEVEERQV 125 Query: 128 YSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------------ 164 YS+ D + D + +G + Q +P +E Sbjct: 126 YSIDDGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIEPRSAISGSTNLEVRA 185 Query: 165 ---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--LKDLSLSRKTFDWGIK 219 + R + +D++ ++ +S ++ PI + ++ G L+D ++R DWGI Sbjct: 186 TKHLYLRQRSLKDRIAAWIDSKTDW--PILTTSIARKWLNDGDGLQDRGITRD-LDWGIP 242 Query: 220 I-------PDDPQYIMYVWIDALTNYLTTTG----YLDNPDGSKAKFWPAD--------L 260 + P + YVW DA Y+ T PD + ++W D Sbjct: 243 VKKGDKPWPGMEGKVFYVWFDAPIEYIAATAEGADKRGEPDSAWRRWWRLDEGAEDVTYT 302 Query: 261 HVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 +GKD + FH + +PA ++ + P L + S ++ + G + S S G + + + Sbjct: 303 QFMGKDNVPFHTLSFPATIIGSGEPWKLVDYIKSFNYLTYDGGQFSTSQGRGVFMDQALS 362 Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 + D R++L+ D + D ++ VN DLA+ +GN VSR + IP Sbjct: 363 ILPADYWRWWLLSHAPESGDSEFTWDNFQQSVNKDLADVLGNFVSRITKFCRSKFGETIP 422 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 G++ +E+++ + ++ M + + ++ A++ ++ + Y + PW K Sbjct: 423 QGGSYGPEEEALIQALTTRIRAYEGFMDHVEVRKSAAELRAIWVLGNEYLQSAAPWSTFK 482 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 T+PD+A+ + + + +IR A+L F+P A+ + + ENR Sbjct: 483 TDPDKAAMQVRLGLNLIRLYAVLSAPFIPFAADAMLAAM--QTENR 526 >gi|15639785|ref|NP_219235.1| methionyl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Nichols] gi|189026023|ref|YP_001933795.1| methionyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] gi|6094408|sp|O83776|SYM_TREPA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|3323103|gb|AAC65761.1| methionyl-tRNA synthetase (metG) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018598|gb|ACD71216.1| methionyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] gi|291060156|gb|ADD72891.1| methionyl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Chicago] Length = 811 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 117/515 (22%), Positives = 220/515 (42%), Gaps = 59/515 (11%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+ A+ Y N PH+G+ + + ADV ARF R+ G F GTDE+G A G++ Sbjct: 6 ITAALPYVNNVPHLGNLIQGLSADVFARFCRMRGYHTCFVCGTDEYGTASETRAAEQGLS 65 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 RD+ D+S+D F RTT H + + L++ + +G I + + Y Sbjct: 66 PAQLCAHYHALHRDIYQWFDLSFDYFGRTTSDAHTELTQALFRHLDARGFISEHESAQAY 125 Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF-- 186 L A + D +G NA+ Q E G + + PEF Sbjct: 126 CLHC-ARFLADRYLRGTCPHCRNAEARADQ-CEHCGVLLEPETLLNARCVSCGTAPEFRP 183 Query: 187 -------ILPIER--------------RNEVI---SFVKSGLKDLSLSRKTFDWGIKIPD 222 + +E+ +N V ++++GL++ +++R WG+ +P Sbjct: 184 TRHLYLNLPALEKAYRSWFCTTNHLWTKNAVRMTEGWLRTGLQERAITRD-LRWGVPVPK 242 Query: 223 D--PQYIMYVWIDALTNYLTTT------------GYLDNPDGSKAKFWPAD------LHV 262 Q + YVW DA Y++ T G D+ K + W D + Sbjct: 243 AGFEQKVFYVWFDAPVGYISITKCGTEAASSQEGGGTDDGVKEKWQSWWLDQQDVELVQF 302 Query: 263 IGKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE- 319 +GKD + FH +++P L+ + + ++ + ++ ++G K SKSLG + + E Sbjct: 303 VGKDNIPFHTLFFPCMLIGSGQRWTMLTRLSATEYLNYEGGKFSKSLGVGVFGSDAKESG 362 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 + D R++L+ D + ++RVN++L + NLV+R+++ + + Y G++P Sbjct: 363 IPSDLWRFYLLYHRPEKSDAHFTWHEFQERVNSELIGNLCNLVNRTLTFVARTYGGVVPA 422 Query: 380 PGAFTESDESILSVCSRVLQEIREN-------MQNQLIHRALAQVISLVSEVDRYFDAQK 432 + ++ + + +R M+ + A +V +L + ++ Sbjct: 423 QDGARSTRAQVMEETLALREAVRNTAKRMTDLMEQVQLREAFREVFALSARANKALQDGA 482 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 PW+ + + +RA ++ VIR + IL F+P Sbjct: 483 PWKTRAQDRERADALMRELCYVIRDVLILAHPFLP 517 >gi|325971031|ref|YP_004247222.1| Methionyl-tRNA synthetase [Spirochaeta sp. Buddy] gi|324026269|gb|ADY13028.1| Methionyl-tRNA synthetase [Spirochaeta sp. Buddy] Length = 741 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 127/522 (24%), Positives = 235/522 (45%), Gaps = 51/522 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M +K +++A+ Y N PH+G+ +++ ADV ARF R G + L+ GTDE+G Sbjct: 1 MSPMKKRLVTSALPYVNNIPHLGNLTQVLSADVFARFCRSKGYETLYICGTDEYGTATET 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A GV+ + D+ RD+ +I++D F RT+ + ++ K+ G I Sbjct: 61 RALKEGVSPRELCDRYHAIHRDIYAWFNIAFDYFGRTSTPEQTKIVQDIFTKVDAAGYIS 120 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWMEEEGYFFRL 169 + Y + + D V +GA G ++ +P++ + Sbjct: 121 EHELEQLYCPSCQRFLADRFVEGTCPHCHSEGARGDQCDSCQTLLDPIELINPRCGVCGT 180 Query: 170 SAYQDKLLSYYESHPEFILPIERRNE---------------VISFVKSGLKDLSLSRKTF 214 K Y P+ + +E E S+++ GLK+ ++R Sbjct: 181 RPVPKKTKHLYIDLPKALPLLEGWMEKASKEGFWANNAIQVTKSWIRDGLKERCITRD-L 239 Query: 215 DWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKD 266 WGI +P P Y + YVW DA Y++ + N K+W P + + IGKD Sbjct: 240 KWGIPVPK-PGYEDKVFYVWFDAPIGYVSISA---NATKDWKKWWGDPENTELFQFIGKD 295 Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV-- 322 + FH + +P+ L++ + + S ++ ++G K SKSLG I +V ++ G+ Sbjct: 296 NIPFHTVIFPSCQLASGETWTMLHHMSSTEYLNYEGGKFSKSLGIGIFGNDV-QDTGIPA 354 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R+++ D + +++VN +L + NLV+R+++ I + Y P Sbjct: 355 DVWRFYMFYNRPEKSDVTFTWADFQEKVNGELIGNLSNLVNRTLTFIQRFY----PDASL 410 Query: 383 FTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 S DE + EI ++ L Q+++L S ++ F +PW+LK ++P Sbjct: 411 LKASLDEELWKQVIAKEAEIDALLERAEEREGLRQILALSSIGNKAFQDGEPWKLKNSDP 470 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +A ++L + +IR L I+++ ++P + +I + F+ EN Sbjct: 471 QKAMSLLKTLIYLIRDLGIMVEPYMPTTSTRI--LAFLGSEN 510 >gi|294503497|ref|YP_003567559.1| methionyl-tRNA synthetase [Yersinia pestis Z176003] gi|262361540|gb|ACY58261.1| methionyl-tRNA synthetase [Yersinia pestis D106004] gi|262365721|gb|ACY62278.1| methionyl-tRNA synthetase [Yersinia pestis D182038] gi|294353956|gb|ADE64297.1| methionyl-tRNA synthetase [Yersinia pestis Z176003] Length = 616 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 112/447 (25%), Positives = 196/447 (43%), Gaps = 44/447 (9%) Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 AQ G+ + + + S+ + ISYD++ T + + +++ ++ G I Sbjct: 4 AQQMGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYGRLKANGYIKN 63 Query: 122 GCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM--------- 160 S Y ++ + D KG A QY A ++P + + Sbjct: 64 RTISQLYD-PEKGMFLPDRFVKGTCPKCKAPEQYGDNCEVCGATYSPTELIDPKSAVSGA 122 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 E E +FF L A+ D L ++ S L + N++ + SGL+ ++R Sbjct: 123 TPVMRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVANKMQEWFDSGLQQWDITRDAPY 179 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADL-----HVIGKDIL 268 +G ++PD P YVW+DA Y+ L + G +FW D H IGKDI+ Sbjct: 180 FGFEVPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWGKDAKTDLYHFIGKDIV 239 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH+++WPA L +N P +F HG++ G K+SKS G I ++ + D LRY+ Sbjct: 240 YFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKYLDADCLRYY 299 Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 +++ D + + +RVNAD+ N + NL SR+ I K + G + A +D Sbjct: 300 YAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQL----ADQLAD 355 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-- 445 + + I + N+ +A+ ++++L +RY D Q PW + K A Sbjct: 356 PVLYKTFTDAATSIADAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLH 415 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472 + + + + R L L+ +P L + Sbjct: 416 AICSMGINLFRVLMTYLKPVLPSLTER 442 >gi|254477821|ref|ZP_05091207.1| methionyl-tRNA synthetase [Ruegeria sp. R11] gi|214032064|gb|EEB72899.1| methionyl-tRNA synthetase [Ruegeria sp. R11] Length = 578 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 114/531 (21%), Positives = 228/531 (42%), Gaps = 49/531 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M + + I++AI Y N H+G+ + AD+ AR+ R G +V+F TDEHG Sbjct: 3 MDDMARFLITSAIPYINGIKHLGNLVGSQLPADLYARYQRARGNEVMFLCATDEHGTPAE 62 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AA AG + + +A +S+D F R++ ++H + K+++ G I Sbjct: 63 LAAAKAGKPVAEYCAEMHEVQAGIAKGFGLSFDHFGRSSSPQNHALTQHFAGKLAEAGLI 122 Query: 120 YKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG---- 164 + YS D+ + D V +G + Q +P +E Sbjct: 123 REVEDRQVYSHADKRFLPDRYVEGTCPNCGYDKARGDQCENCTKQLDPTDLIEPRSAISG 182 Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + S +D+L ++ +S ++ + + GL+D ++R Sbjct: 183 STDLEVRATKHLYLCQSQLKDELDAWIDSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD- 241 Query: 214 FDWGIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD--- 259 DWGI + P + YVW DA Y+ G +G ++W D Sbjct: 242 LDWGIPVKKGDQDWPGMEGKVFYVWFDAPIEYIAAAGEWAEANGKSDAEWERWWRTDKGA 301 Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVID 312 + +GKD + FH + +PA +L + P + + S ++ + G + S S G + Sbjct: 302 EDVKYVQFMGKDNVPFHTLSFPATILGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVF 361 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 + +E + D R++L+ D + + ++ VN DLA+ +GN VSR Sbjct: 362 MDQALEILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSK 421 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 Y +P G++ E++++++ + ++ ++M + ++ ++ ++ + Y + Sbjct: 422 YGEEVPAGGSYGEAEQTLIKELTTRIRAYEDHMAAMEVRKSAQELRAIWVAGNEYLQSVA 481 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 PW KT+P++A+ + + + +IR A+L F+P + + + D++ Sbjct: 482 PWSTFKTDPEQAAAQVRLGLNLIRLYAVLSSPFIPTAKDTLLAAMQTEDDS 532 >gi|242036495|ref|XP_002465642.1| hypothetical protein SORBIDRAFT_01g042830 [Sorghum bicolor] gi|241919496|gb|EER92640.1| hypothetical protein SORBIDRAFT_01g042830 [Sorghum bicolor] Length = 799 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 122/536 (22%), Positives = 228/536 (42%), Gaps = 63/536 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + I++A+ Y N PH+G+ ++ ADV AR+ RL G + ++ GTDE+G A Sbjct: 14 RRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETKA 73 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T K D+ ++ +I +D F RT+ + C ++ K+ + + + Sbjct: 74 MEEKCTPKEICDKYHAIHNEVYKWFNIKFDKFGRTSSPEQTEVCHAIFHKLMENNWLTEN 133 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEG------ 164 Y + + D V + NA NP + ++ + Sbjct: 134 TMQQLYCDTCQKFLADRLVEGTCPNKACNASARGDQCETCSTLLNPTELIDPKCKVCKNT 193 Query: 165 --------YFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 F L +DKL++Y E+ +++K GLK ++R Sbjct: 194 PRIRDTDHLFLELPLLRDKLVNYINETSVAGSWSQNAIQATNAWLKEGLKPRCITRD-LK 252 Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTG--------YLDNPDGSKAKFWPADLHVIGK 265 WG+ +P + + YVW DA Y++ T + NPD + +GK Sbjct: 253 WGVPVPHEKYKDKVFYVWFDAPIGYVSITASYTPEWEKWWKNPDNVEL------FQFMGK 306 Query: 266 DILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIE 318 D + FH I +P+ LL + K + ++ ++ K SKS GN + Sbjct: 307 DNVPFHTIMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSKGIGVFGNDAKDTNIPP 366 Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYD 374 EV RY+L+ D + L+ ++N++L N +GN ++R +S + K YD Sbjct: 367 EV----WRYYLLMNRPEASDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYD 422 Query: 375 GMIP-TPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 ++P P A T +++ S+ +++ + M+ + + L + + S+ + Y + Sbjct: 423 SVVPDAPNASTHPLTKTLAEKTSKWVEQYLDAMEKVKLKQGLKSAMGISSDGNAYLQESQ 482 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQ 487 W+L K +P + V+ +V ++ LA LL+ F+P ++++ L +EN F Sbjct: 483 FWKLYKEDPASCAIVMKTSVGLVYLLACLLEPFMPSFSDEVLRQLNLCPEENLSFS 538 >gi|89069900|ref|ZP_01157234.1| methionyl-tRNA synthetase [Oceanicola granulosus HTCC2516] gi|89044576|gb|EAR50695.1| methionyl-tRNA synthetase [Oceanicola granulosus HTCC2516] Length = 572 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 123/524 (23%), Positives = 226/524 (43%), Gaps = 57/524 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R G +VLF TDEHG AA AG Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLFARYQRARGHEVLFLCATDEHGTPAELAAAKAGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + + D+A+ +S+D F R++ ++H + ++++G I + + Sbjct: 66 PVAEYCAEMWQVQADLAEGFGLSFDHFGRSSSPQNHALTQHFAGVLAEQGLIEEVSETQM 125 Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE-------------- 162 YS D + D E +G Q +PV ++ Sbjct: 126 YSPADGRFLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPVDLIDAYSTISGSRELEMRA 185 Query: 163 -EGYFFRLSAYQDKLLSYYESH---PEFILPIERR--NEVISFVKSGLKDLSLSRKTFDW 216 + + R S +D+L ++ ++ P I R+ N+ GL+D ++R DW Sbjct: 186 TKHLYLRQSVLKDELAAWIDTKTDWPVLTTSIARKWLND-----GDGLQDRGITRD-LDW 239 Query: 217 GIKI-------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD-------- 259 G+ + P + YVW DA Y+ +++ G A++W D Sbjct: 240 GVPVKRGSEDWPGMEGKVFYVWFDAPIEYIACAQEWVEAGKGDDWARWWRTDRGADDVRY 299 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 +GKD + FH + +PA +L + P L + S ++ + G + S S G + + + Sbjct: 300 TQFMGKDNVPFHTLSFPATILGSREPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQAL 359 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E + D R++L+ D + + + VN DLA+ +GN VSR + + Sbjct: 360 EILPADYWRWWLLSHAPESADAEFTWENFQASVNKDLADVLGNFVSRVTKFCNAKFGPQV 419 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P GA + +++ ++ +M + +A A++ ++ + Y PW + Sbjct: 420 PEAGAHGPDEAALIEELEGRVRAYERHMDAIEVRKAAAELRAIWVTGNEYLQKAAPWTVI 479 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 KT+ RA + + + +IR AIL FVP + ++ + L V+D Sbjct: 480 KTDEARAKAQIALGLNLIRLYAILSAPFVPNASARMLEALGVSD 523 >gi|257389032|ref|YP_003178805.1| methionyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286] gi|257171339|gb|ACV49098.1| methionyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286] Length = 708 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 119/527 (22%), Positives = 216/527 (40%), Gaps = 68/527 (12%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N H+GH + DV AR R G F G+D HG I A GV Sbjct: 14 VTVGLPYANGDLHVGHLRGYVNGDVYARALRRVGQQTAFVCGSDMHGTPIVVNAGEEGVD 73 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + + + + + ++ +D++ T + + + + + ++ +Y+ Y Sbjct: 74 PEAYALEYHETYAETFPQFNVEFDNYGHTHDDTNQELTQEFVRSWVEQDHVYEKEIQVGY 133 Query: 129 SLRDEAYYND----------------DEVYKGADGQYYNAQ---------HNPVQWMEEE 163 + + D DE +G + NP ++ E Sbjct: 134 DPEADQWLPDRLVEGTCPYCGERARGDECDEGCQRHLEPGEIEDPVSTRTGNPAEYRTRE 193 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 F RL+ +Q+ L + + +N+ +V+ L+DL ++R DWG+ P D Sbjct: 194 HKFLRLNDFQEYLQGFLDR---LDGTDNAQNQPREWVEGDLQDLCITRD-IDWGVDYPTD 249 Query: 224 PQ-------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----------------- 259 ++YVW+DA Y+ +T G W + Sbjct: 250 ADDEETEEDLVLYVWVDAPIEYVASTKQYTERVGEDTYDWESVWKLGGEERHGTDWDDDW 309 Query: 260 -------LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312 +HVIG+DI++ HA++WPA L A P+ + + GF+ G +S S + Sbjct: 310 TDEAGEIVHVIGRDIIQHHAVFWPAMLRGAGYNEPRAILATGFVNIDGNSLSTSRNRAVW 369 Query: 313 PIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 E ++ D RY++V D + D +RVN +L +GN + RS+ + Sbjct: 370 ADEYLDAGFHPDLFRYYIVSGSGIETDVDFSWDRFAERVNGELVGNVGNFLYRSLLFAKR 429 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV-ISLVSEVDRYFDA 430 +Y G TP TE + + ++ + + + + RALA V + L + Y Sbjct: 430 NYGG---TPD--TEISDDVRERIEDAIETFEDAVDDYEL-RALADVGVELADFGNEYIQR 483 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +PW L +P+RA V+ V++ + +A+LLQ +P+ A +I+ L Sbjct: 484 NEPWNLVDDDPERAQQVIRDCVQLSKAVAVLLQPVLPEKAERIWGQL 530 >gi|315499719|ref|YP_004088522.1| methionyl-tRNA synthetase [Asticcacaulis excentricus CB 48] gi|315417731|gb|ADU14371.1| methionyl-tRNA synthetase [Asticcacaulis excentricus CB 48] Length = 572 Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 122/521 (23%), Positives = 224/521 (42%), Gaps = 50/521 (9%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++A+ Y N H+G+ A M+ ADV ARF R G +VL+ TDEHG AA Sbjct: 3 RILITSALPYINGIKHLGNLAGSMLPADVYARFMRARGHEVLYICATDEHGTPAELAAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG K + D+ + + +SYD F R++ + + + + + G I + Sbjct: 63 AGQDVKTYCDEQHLIQKTAGEAFGLSYDWFGRSSSEENRHLTQAFCEALDRNGLIEERTD 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP---------VQ 158 YS+ D + D V ++ A G Q N NP ++ Sbjct: 123 KMVYSIDDGRFLPDRYVEGTCPHCKFEKARGDQCDNCGRLLDPTDLINPYSAVSGSRNLE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + + + + + +L ++ ES ++ P ++ + + GL D ++R WG+ Sbjct: 183 VRDTKHLYLLQTKVEPQLRAWIESKTQW--PQLAKSIAMKHLDEGLIDRGITRD-LKWGV 239 Query: 219 KIPDDPQ-------YIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD--------L 260 I D + + YVW DA Y+ T N G+ +W D + Sbjct: 240 PITKDGKPRDGFENKVFYVWFDAPVEYIGATQEYFNAKGNADGWQSWWRLDQGAVDVTYV 299 Query: 261 HVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 +GKD + FH + +PA ++ +N P + + + ++ G K S S+ + + +E Sbjct: 300 QFMGKDNVAFHTVSFPATIIGSNEPWKMVDTLKAFNWLNWYGGKFSTSMNRGVFMDQALE 359 Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 + D R++L+ + G D + + + VN DLA+ +GN +R + + G++P Sbjct: 360 LLPADYWRWYLISQSPEGSDSSFTWEQFQSAVNKDLADVLGNFANRILKFTESKFGGVVP 419 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 G ++ + + S +L E E + + +A V + + Y PW K Sbjct: 420 EGGEAGPQEQKLYADLSALLAEATEAFEAMEMRKAAQAVRRIWVLGNEYLQEAAPWTAFK 479 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 T+ +RA ++ + ++R A+L Q P A I D + V Sbjct: 480 TDVERAGVIVRHGLNLVRLYAVLAQPLTPFAAQSIADCVGV 520 >gi|145629338|ref|ZP_01785137.1| tellurite resistance protein TehB [Haemophilus influenzae 22.1-21] gi|144978841|gb|EDJ88564.1| tellurite resistance protein TehB [Haemophilus influenzae 22.1-21] Length = 548 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 93/321 (28%), Positives = 164/321 (51%), Gaps = 16/321 (4%) Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E E +FF L A++ L + S L E N++ + +SGL+ +SR +G +I Sbjct: 53 ESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFEI 109 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHAIY 274 P YVW+DA Y+ + L + +G +FW A+L H IGKDI+ FH+++ Sbjct: 110 PGAKDKFFYVWLDAPIGYMASFKNLCDREGIDFNEFWAEGSDAELYHFIGKDIVYFHSLF 169 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L + P VF+HG++ G K+SKS G I + + + LRY+ ++ Sbjct: 170 WPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAKLN 229 Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 +D ++ D +RVN D+ N + NL SR+ I K ++G + A DE++ + Sbjct: 230 DRIEDLDFNLDDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDEALFAE 285 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451 + ++I +++ ++A+ ++++L + ++Y D + PW + K A V + Sbjct: 286 FTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCSMG 345 Query: 452 VEVIRQLAILLQAFVPKLANK 472 +E+ R L L+ +PKLA + Sbjct: 346 IELFRVLMSYLKPVLPKLAER 366 >gi|257457531|ref|ZP_05622698.1| methionyl-tRNA synthetase [Treponema vincentii ATCC 35580] gi|257444917|gb|EEV19993.1| methionyl-tRNA synthetase [Treponema vincentii ATCC 35580] Length = 791 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 121/517 (23%), Positives = 225/517 (43%), Gaps = 49/517 (9%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I++A+ Y N PH+G+ +++ ADV ARF RL G L+ GTDE+G A G T Sbjct: 6 ITSALPYVNNIPHLGNLIQVLSADVFARFCRLRGYTSLYVCGTDEYGTATETKALEEGKT 65 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D RD+ +IS+D F RT+ + + + ++K I G I + Y Sbjct: 66 PRELCDYYHAIHRDIYHWFNISFDYFGRTSTPQQTEIVQGIFKDIEKNGFIKEHTIEQLY 125 Query: 129 SLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE-- 185 + D V Y +A+ + E G + + S + PE Sbjct: 126 CAHCNRFLADRYVRGTCPHCGYEDARGDQC---EACGKLLEPTELKAPRCSTCGAAPEPR 182 Query: 186 ----------FILPI------------ERRNEVISFVKSGLKDLSLSR---KTFDWGIKI 220 I+P + N + K L+D R + WGI + Sbjct: 183 STKHLYIDLPGIVPQYEPWMQKASKEGQWSNNAVQMTKGWLRDGLQERAITRDLKWGIPV 242 Query: 221 PDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IGKDILRFHA 272 P + YVW DA Y++ T + G+ K W +D+ + IGKD + FH Sbjct: 243 PKAGFEDKVFYVWFDAPIGYISITKCFTDLTGTDWKNWWLEQSDVELFQFIGKDNIPFHT 302 Query: 273 IYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFL 329 + +P L+++ K + S ++ ++ K SKS G V + D R+++ Sbjct: 303 VIFPCSLIASGKDWVKLHHISSSEYLNYESGKFSKSKGIGVFGSDAKDSGIPADMWRFYI 362 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESD- 387 D + ++RVN++L + NL++R+++ + + Y+G+IP G + D Sbjct: 363 FYNRPEKNDALFTWKDFQERVNSELVGNLCNLINRTLTFVSRYYNGVIPQRDGPASSRDD 422 Query: 388 -----ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 ES+ + +++I ++ + A ++ +L S ++ F +PW+ ++ +P+ Sbjct: 423 VRFVTESLRAAAKYSIEKITALLEEAELRDAFHELFALSSVANKAFQDGEPWKNREADPE 482 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +A +L+ +I+ L IL+ ++P+ A+ + L + Sbjct: 483 KAEALLFELCYLIKDLLILMHPYMPEYADAVASFLGI 519 >gi|297201071|ref|ZP_06918468.1| methionyl-tRNA synthetase [Streptomyces sviceus ATCC 29083] gi|197712144|gb|EDY56178.1| methionyl-tRNA synthetase [Streptomyces sviceus ATCC 29083] Length = 571 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 136/553 (24%), Positives = 239/553 (43%), Gaps = 62/553 (11%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N H+G+ M+ ADV +R+ R G +VL+ TDEHG AA+ G+ Sbjct: 6 ITSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHEVLYICATDEHGTPAELAAKEQGL 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 F Q + + D +++D F R++ +++ + + +++++ G I + Sbjct: 66 PVAEFCAQAHDAQKAVYDGFALAFDYFGRSSSEQNVEITQHFARRLNENGFIEERAIRQV 125 Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP---------VQWME 161 YS D + D V Y A G Q N NP ++ E Sbjct: 126 YSPADGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLINPRSAISGSTDLEVRE 185 Query: 162 EEGYFFRLSAYQDKLLSYYESH----PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + F S Q ++ + +H P+ I R+ ++ GL D +++R DWG Sbjct: 186 TKHLFLLQSKLQHEVEEWVAAHEEEWPQLAASIARK-----WLTEGLHDRAITRD-LDWG 239 Query: 218 IKIPDD--PQY-----IMYVWIDALTNYLTTTG-YLD-NPDGSKAKFWPADL-------H 261 + +P D P+ + YVW DA Y+ T + D +P+ K W D+ Sbjct: 240 VPVPADTWPELAAEGKVFYVWFDAPIEYIGATKEWADLDPENRDWKSWWYDVDTTVRYTE 299 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEE 319 + KD + FH + +PA L P K + F + + G K S S + + ++ Sbjct: 300 FMAKDNVPFHTVMFPATELGVREPWKKVDYVKAFNWLTYYGGKFSTSQKRGVFTDQALDI 359 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 + D RYFL+ D + + VN DLA+ +GN V+R +S K + +P Sbjct: 360 LPADYWRYFLIANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSKKRFGEEVPA 419 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 G E++ + +R+L E M+ +A A + +L S + Y + + PW KT Sbjct: 420 GGEPGEAEAKLGEEIARLLAEYESQMEALQFRKAAAALRALWSAGNSYLEEKAPWLEIKT 479 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ-----RLK 494 + D A+ L + +I A++ + F+P A + + +AD+ + + D+ L Sbjct: 480 DKDGAALTLRTAMNLIHLYAVVSEPFIPATAKTMREAFALADDTATWVTADEARALTALT 539 Query: 495 PGFMLHKTFDPIF 507 PG T P+ Sbjct: 540 PGIAF--TVPPVL 550 >gi|83858613|ref|ZP_00952135.1| methionyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633] gi|83853436|gb|EAP91288.1| methionyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633] Length = 568 Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 126/522 (24%), Positives = 232/522 (44%), Gaps = 58/522 (11%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++A+ Y N H+G+ A M+ ADV ARF RL G DVL TDEHG AA Sbjct: 3 RILITSALPYINGVKHLGNLAGSMLPADVYARFMRLQGHDVLAICATDEHGTPAELAAAA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + + D+ + + + +S+D F RT+ ++ + + + + G I + Sbjct: 63 AGQDVRAYCDEQHEIQKSIGEQFGLSWDYFGRTSSPQNAELTQHFAETLEKNGLIAEVVE 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWMEEEGYF------- 166 YS+ D + D V ++ A G Q N +P++ +E Sbjct: 123 QQVYSIDDGRFLPDRYVEGTCPNCGFEKARGDQCDNCGKLLDPIELIEPYSAVSGSKNLE 182 Query: 167 --------FRLSAYQDKLLSYYESH---PEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 + + ++++ ++ ++ P F I + ++ GL+D +++R Sbjct: 183 VRDTKHLQLKQTVMEERIRAWVDAADGWPSFAKSIAYK-----WLDEGLRDRTITRD-LK 236 Query: 216 WGIKIPDDPQ-------YIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD-------- 259 WG+ + + Q + YVW DA Y++ T + + G +W D Sbjct: 237 WGVPVTKNGQPREGFEDKVFYVWFDAPIGYISATREWAEQNGGDWESWWRTDKGADDVRY 296 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGNVIDPIE 315 + +GKD + FH + +PA LL + P K F+ ++ G K S S + + Sbjct: 297 VEFMGKDNVAFHTVSFPATLLGSEEPWKTVDALKAFN--WLTWYGGKFSTSNKRGVFMDQ 354 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 +E + D R++L G D + D + VN DLA+ +GN V+R + ++G Sbjct: 355 ALELLPADYWRWYLTAYGPEGSDAQFTWDHFQSSVNKDLADVLGNFVNRILKFGASRFEG 414 Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 +IP G E++ + + + L I + + +A A+ +L + + Y +PW Sbjct: 415 VIPEGGTPGEAEAWLETEVATRLANIASHYEAMEFRKAAAETRALWAAGNEYLTRAEPWV 474 Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 KT+ D+A+ + + + ++R AI+ Q +P+ A KI L Sbjct: 475 HFKTDKDQAALGVRMGINLVRLCAIVAQPVIPQAAGKILAAL 516 >gi|84502718|ref|ZP_01000837.1| methionyl-tRNA synthetase [Oceanicola batsensis HTCC2597] gi|84389113|gb|EAQ01911.1| methionyl-tRNA synthetase [Oceanicola batsensis HTCC2597] Length = 573 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 124/544 (22%), Positives = 238/544 (43%), Gaps = 58/544 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R G +VLF TDEHG AA AG Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLYARYQRARGHEVLFLCATDEHGTPAELAAAKAGK 65 Query: 68 TTKVFV----DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 + D +R RD +S+D F R++ ++H + ++++ G I + Sbjct: 66 PVAEYCAEMHDVQARIARD----FRLSFDHFGRSSGPQNHRLTQHFAGRLAEAGLISEVD 121 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYN---AQHNPVQWMEEEG-------- 164 YSL D + D + ++GA G + Q +PV ++ Sbjct: 122 EHQMYSLSDGRFLPDRYIEGTCPNCGFEGARGDQCDNCTKQLDPVDLIDPHSTISGSKDL 181 Query: 165 -------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 F R SA +D+L ++ +S ++ + + GL+D ++R DWG Sbjct: 182 EMRATKHLFLRQSAMKDRLDAWIDSKDDWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWG 240 Query: 218 IKI-------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD--------L 260 I + P + YVW DA Y+ ++D G+ ++W D Sbjct: 241 IPVRRGEEDWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGTDWERWWRTDKGAEDVRYT 300 Query: 261 HVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 +GKD + FH + +PA +L + P L + S ++ +G + S S G + + +E Sbjct: 301 QFMGKDNVPFHTLSFPATILGSGEPWKLVDYIKSFNYLNFEGGQFSTSRGRGVFMDQALE 360 Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 + D R++L+ D + + VN DLA+ +GN VSR + +P Sbjct: 361 ILPADYWRWWLLSHAPESSDAEFTWANFQASVNKDLADVLGNFVSRVTKFCRSKFGETVP 420 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 G + ++++++ L +M + ++ + ++ + Y + PW K Sbjct: 421 EGGDYGPREDALVAELETRLSAYAAHMDAMEVRKSAQDLRAIWVAGNEYLQSAAPWAAYK 480 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR---LKP 495 +P RA+ ++ +++ +IR A++ F+P ++++ + + ++D + S+ + L+P Sbjct: 481 EDPARAAAIVRLSLNLIRLYAVVSAPFLPDASDRLAEAMHLSDRSWPEGSVAEALSLLQP 540 Query: 496 GFML 499 G+ Sbjct: 541 GWAF 544 >gi|300175086|emb|CBK20397.2| unnamed protein product [Blastocystis hominis] Length = 749 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 119/512 (23%), Positives = 227/512 (44%), Gaps = 46/512 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ + I++A+ Y N PH+G+ ++ ADV AR+ R GL+ L+ GTDE+G A Sbjct: 190 KQNILITSALPYVNNVPHLGNLIGCVLSADVFARYCRERGLNTLYVCGTDEYGTATETRA 249 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDT--CRILWKKISDKGDI 119 Q +T + ++ R + D DI +D F RT TE DT + ++K++ ++ + Sbjct: 250 QADHMTPREICNKFHAIHRAVYDWFDIHFDFFGRTSTEDPRKDTQIAQGIFKRLCEEDQL 309 Query: 120 YKG------CYSGWYSLRDEAYYNDDEV--YKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171 + C+ L D + Y A G + N + E ++ Sbjct: 310 VEQEIEQVYCHQCGRFLADRFIEGTCPICGYPKAGGDQCDKCGNLLNATELVNPVCKVGG 369 Query: 172 YQDKLLSYYESHPEFILP---IERR-----------------NEVISFVKSGLKDLSLSR 211 K+ + H LP E R N ++++GLK ++R Sbjct: 370 PTHKVENRVTKHLFLNLPKLEPELRAWVAETSVANDWSSNAINITNGWIENGLKPRCITR 429 Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVI---G 264 WG +P + + YVW DA Y++ T N ++W P D+ ++ G Sbjct: 430 D-LKWGTPVPREGYEDKVFYVWFDAPIGYISITA---NYTKEWKQWWQNPKDVKLVQFMG 485 Query: 265 KDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVG 321 KD + FH + +P+ L+ P K ++ ++ ++ K SKS G + + + V Sbjct: 486 KDNIPFHTVIFPSTLIGTRDPWTKVTQISCTEYLNYEDGKFSKSQGTGVFGDQAKDTNVP 545 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 + R++L+ D + + L ++ N +L +GN V R +S + D +P G Sbjct: 546 SEVWRFYLLSNRPEQSDSAFYWEDLAEKNNNELLKNLGNFVHRCLSFVYNRMDATVPPCG 605 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 A TE ++ ++ + LQ+ E M + L + + ++Y +PW + K++P Sbjct: 606 AKTEREQKLIEAVNETLQKYNEAMMGTHLKAGLKWAMEISRLGNQYLQDAEPWTVLKSDP 665 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ T+ YV V ++ ++ + + F+P ++K+ Sbjct: 666 EQCGTICYVAVNLVYLISNVFEPFMPGFSDKV 697 >gi|67474236|ref|XP_652867.1| methionyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS] gi|56469764|gb|EAL47481.1| methionyl-tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS] Length = 754 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 121/507 (23%), Positives = 232/507 (45%), Gaps = 47/507 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G ++ ADV AR+ R+ G + L+ GTDE+G + A Sbjct: 16 ILITSALPYCNNVPHLGTLIGCVLSADVYARYCRMRGYNTLYVCGTDEYGTTTEQKALLE 75 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 T + ++ +++ D DIS++ F RT+ ++ + + ++K ++D G IYK Sbjct: 76 HCTPQEICNKYYTLHKEVYDWFDISFNYFGRTSTEKQTEITQDIFKHLNDNGYIYKDSVE 135 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161 +Y + + + D V GA G ++ + +E Sbjct: 136 QFYCEKCDKFLADRFVEGVCPFCNAPGARGDQCDSCQKLINTVELINPQCKVCHSVPVRR 195 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WGI 218 E F L QDKL ++ E + E N K+ L +L T D WG Sbjct: 196 SSEHLFIDLPKLQDKLGNWAN---ETMSKYEWPNNCACATKTWLNNLKGRCITRDLKWGT 252 Query: 219 KIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDILRF 270 K+P + + YVW DA YL+ T Y D+ K+W + HV +GKD + F Sbjct: 253 KVPLEGFENKVFYVWFDAPIGYLSITANYTDD----WKKWWMDNEHVELTQFLGKDNIVF 308 Query: 271 HAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327 H++ +P+ LL + + +K+ + ++ ++ K SKS G + + ++ + + RY Sbjct: 309 HSVLFPSTLLGTGESWTMVRKLATTEYLNYEDCKFSKSNGTGVFGDDAMKTGIPPEVWRY 368 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTES 386 +L+ D + + L ++ N +L IGNL R+++ +K++D IP TE Sbjct: 369 YLLINRPEQSDTVFLWNDLMEKNNNELLKNIGNLAQRTLTFAVKNFDNKIPKKITKITEV 428 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 + + + +E M+N + L +++ S ++Y W+ K++ +RA Sbjct: 429 ELNCEKEIKELYKEYLNAMENVKLKEGLKIAMAISSVGNKYLQDTAAWKTIKSDKERAGD 488 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKI 473 +Y + ++ ++++L ++P+ K+ Sbjct: 489 EIYYALNILYFVSLVLDPYIPEFGKKV 515 >gi|326519270|dbj|BAJ96634.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 594 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 119/517 (23%), Positives = 220/517 (42%), Gaps = 45/517 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + +++A+ Y N PH+G+ ++ ADV AR+ RL G +VL+ GTDE+G A Sbjct: 13 RRNVLVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGHNVLYVCGTDEYGTATENRA 72 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G + D+ +++ + +I++D F RT+ + + C+ ++ K+ D + + Sbjct: 73 LEEGCSPLQICDKYHAIHKEVYEWFNINFDHFGRTSTPQQTEICQSIFSKLLDNNWLSEN 132 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y + + D V + + G + D E Sbjct: 133 TMQQLYCESCQRFLADRFVVGSCPVEGCGNDTARGDQCDRCGRLLNSTELIDPRCKVCEG 192 Query: 183 HP----------EFILPIERRNEVI------------------SFVKSGLKDLSLSRKTF 214 P E L E+ + I +++K GLK ++R Sbjct: 193 IPIVRDTDHLFLELPLLKEQLEKYIDEASATGSWSQNAVRITNAWLKEGLKPRCITRD-L 251 Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKDILR 269 WG+ +P + + YVW DA Y++ T P+ K P ++ + +GKD + Sbjct: 252 KWGVPVPHEKYKDKVFYVWFDAPIGYISITACY-TPEWEKWWKNPENVELYQFMGKDNVP 310 Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALR 326 FH + +P+ LL N L K + ++ ++ K SK+ G V + D R Sbjct: 311 FHTVMFPSALLGTGENWTLMKNISVTEYLNYESGKFSKTKGIGVFGNDAKATNIPADVWR 370 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP-TPG 381 Y+L+ D + +GL+ + N +L N +GN + R +S I K Y +IP P Sbjct: 371 YYLLSNRPEASDAVFTWEGLQIKHNNELINNLGNFIYRVLSFIAKPEGAGYGSIIPEAPN 430 Query: 382 AFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 A T +S+ ++++ + M + + L +++ SE + Y + W+L K + Sbjct: 431 ANTHPLSQSLAETVGNLIEQYIDAMDKVKLKQGLKIAMAISSEGNAYLQESQFWKLYKQD 490 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P +TV+ + ++ LA LL+ F+P + + L Sbjct: 491 PASCATVMKTSAGLVYLLACLLEPFMPSFSKDVLQQL 527 >gi|114766268|ref|ZP_01445255.1| methionyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601] gi|114541469|gb|EAU44514.1| methionyl-tRNA synthetase [Roseovarius sp. HTCC2601] Length = 570 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 122/526 (23%), Positives = 224/526 (42%), Gaps = 57/526 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R G +VLF TDEHG AA AG Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLFARYQRARGNEVLFLCATDEHGTPAELAAAKAGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + +A+ +S+D F R++ ++H + ++++G I + + Sbjct: 66 PVAEYCAEMHEVQSKIAEGFRLSFDHFGRSSSPQNHKLTQHFAGVLAERGLIREVSETQM 125 Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM---------------E 161 YS D Y D E +G Q +PV+ + E Sbjct: 126 YSPTDGRYLPDRYIEGTCPNCGFEDARGDQCDNCTKQLDPVELINPRSVISGATDLEMRE 185 Query: 162 EEGYFFRLSAYQDKLLSYY---ESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDW 216 + + S +D+L S+ E P I ++ N+ GL+D ++R DW Sbjct: 186 TKHLYLCQSQMKDQLESWIDTREGWPVLTTSIAKKWLND-----GDGLQDRGITRD-LDW 239 Query: 217 GIKI-------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD-------- 259 GI + P + YVW DA Y+ ++D G ++W D Sbjct: 240 GIPVKKGEEDWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGDDWTRWWRTDKGAEDVTY 299 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 +GKD + FH + +PA +L + P L + S ++ + G + S S G + + + Sbjct: 300 TQFMGKDNVPFHTLSFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQAL 359 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E + D R++L+ D + + + VN DLA+ +GN SR + ++ Sbjct: 360 EILPADYWRWWLLSHAPESSDAEFTWENFQSSVNKDLADVLGNFASRVTKFCRSKFGEVV 419 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G E + +++ + ++E E+M + + ++ + + + Y PW Sbjct: 420 PEDGRTGEREAQLVADLTAKVREYEEHMAHAEVRKSATALRAAWVLGNEYLQDAAPWSTF 479 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 KT+P+ A+ + + + VIR A++ Q F+P + ++ L D++ Sbjct: 480 KTDPETAAAQIRLALNVIRLYAVISQPFIPDASAQLLQALKTDDDS 525 >gi|300176882|emb|CBK25451.2| unnamed protein product [Blastocystis hominis] Length = 647 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 126/548 (22%), Positives = 243/548 (44%), Gaps = 50/548 (9%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + + I++A+ Y N PH+G+ ++ ADV AR+ R GL+ L+ GTDE+G AQ Sbjct: 89 QNILITSALPYVNNVPHLGNLIGCVLSADVFARYCRERGLNTLYVCGTDEYGTATETRAQ 148 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDT--CRILWKKISDKGDIY 120 +T + ++ R + D DI +D F RT TE DT + ++K++ ++ + Sbjct: 149 ADHMTPREICNKFHAIHRAVYDWFDIHFDFFGRTSTEDPRKDTQIAQGIFKRLCEEDQLV 208 Query: 121 KG------CYSGWYSLRDEAYYNDDEV--YKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 + C+ L D + Y A G + N + E ++ Sbjct: 209 EQEIEQVYCHQCGRFLADRFIEGTCPICGYPKAGGDQCDKCGNLLNATELVNPVCKVGGP 268 Query: 173 QDKLLSYYESHPEFILP---IERRNEVIS-----------------FVKSGLKDLSLSRK 212 K+ + H LP E R V + ++++GLK ++R Sbjct: 269 THKVENRVTKHLFLNLPKLEPELRAWVAATSVANDWSSNAINITNGWIENGLKPRCITRD 328 Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVI---GK 265 WG +P + + YVW DA Y++ T N ++W P D+ ++ GK Sbjct: 329 -LKWGTPVPREGYEDKVFYVWFDAPIGYISITA---NYTKEWKQWWQNPKDVKLVQFMGK 384 Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGV 322 D + FH + +P+ L+ P K ++ ++ ++ K SKS G + + + V Sbjct: 385 DNIPFHTVIFPSTLIGTRDPWTKVTQISCTEYLNYEDGKFSKSQGTGVFGDQAKDTNVPS 444 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 + R++L+ D + + L ++ N +L +GN V R +S + D +P GA Sbjct: 445 EVWRFYLLSNRPEQSDSAFYWEDLAEKNNNELLKNLGNFVHRCLSFVYNRMDATVPPCGA 504 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 TE ++ ++ + LQ+ E M + L + + ++Y +PW + K++P+ Sbjct: 505 KTEREQKLIEAVNETLQKYNEAMMGTHLKAGLKWAMEISRLGNQYLQDAEPWTVLKSDPE 564 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKI-FDILFVADENRCFQSLDQRLKPGFMLHK 501 + T+ YV V ++ ++ + + F+P ++K+ + + F D + ++ + G ++K Sbjct: 565 QCGTICYVAVNLVYLISNVFEPFMPGFSDKVCYQLNF--DHGKIPDVFEEVIPAGHKINK 622 Query: 502 TFDPIFPR 509 PIF + Sbjct: 623 IL-PIFKK 629 >gi|194366698|ref|YP_002029308.1| methionyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] gi|226710935|sp|B4SRG1|SYM_STRM5 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|194349502|gb|ACF52625.1| methionyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] Length = 693 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 126/495 (25%), Positives = 199/495 (40%), Gaps = 42/495 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R R+ G F D HG I AA+ AGVT Sbjct: 7 VTTALPYANGPLHLGHLVGYIQADIWVRARRMSGGKAWFVCADDTHGTPIMLAAEKAGVT 66 Query: 69 TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A +++D + T + + K+ G I + + + Sbjct: 67 PETFIANIQASHERDFA-AFGVAFDHYDSTNSAANKALTEQFYLKLEAAGHISRRSVAQF 125 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162 Y + D V G+ QY A + P E Sbjct: 126 YDPAKGMFLPDRYVKGICPNCGSADQYGDNCEVCGATYAPTDLKEPRSVVSGATPEMRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222 E +FF + + L + + E ++ + GL+ +SR +G +IP Sbjct: 186 EHFFFEVGHFDGFLRDWLAGDVALPGVKAKLGEWLN-AEGGLRAWDISRDAPYFGFEIPG 244 Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYWP 276 P YVW+DA YL++ L + G +A H +GKDI+ FH ++WP Sbjct: 245 QPGKYFYVWLDAPIGYLSSFQTLCSRIGEDFEAHLRAGTSTELHHFLGKDIVNFHGLFWP 304 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIAC 335 A L P ++ +G++ G K+SKS G + ++ + +ALRY+ + Sbjct: 305 AVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDAGLEPEALRYYFAAKSGG 364 Query: 336 GKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 G D + RVNADL NL SR I K +DG++ A D + Sbjct: 365 GVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFISKRFDGLL----AAQLPDAAQYQRF 420 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTV 452 L IRE + A+ ++L E +RY D KPW + K A V + Sbjct: 421 VDGLAPIREAYERNDPAAAIRLTMTLADEANRYIDDVKPWVIAKQEGADAQLQAVCSQGL 480 Query: 453 EVIRQLAILLQAFVP 467 + R L L+ +P Sbjct: 481 NLFRVLVTALKPVLP 495 >gi|145507618|ref|XP_001439764.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124406959|emb|CAK72367.1| unnamed protein product [Paramecium tetraurelia] Length = 840 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 126/512 (24%), Positives = 231/512 (45%), Gaps = 45/512 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + + I++A+ Y N PH+G+ ++ AD AR+ RL G + L+ GTDE+G Sbjct: 268 KGKRNVLITSALPYVNNVPHLGNIIGCVLSADTFARYSRLRGYNTLYVCGTDEYGTATEV 327 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A +T + + +++ D DI +D F RT+ H + + ++ + K Sbjct: 328 KAIQENMTPQQICTKYFEIHKNVYDWFDIDFDYFGRTSTPVHTEITQEIFNHLHPKYTTQ 387 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWMEEEGYFFRL 169 K + S + Y D V Y A G ++ +PV+ + + Y + Sbjct: 388 KTTPQTFCS-HCKMYLADRYVSGTCPHCQYDDARGDQCDSCGKLLDPVELINSKCYICKN 446 Query: 170 SAYQDKLLSYYESHPEFILPIER---------------RNEVISFVKSGLKDLSLSRKTF 214 Y + PE +E+ N +++K GLK+ ++R Sbjct: 447 KPEIKDTKHIYINLPEIQERLEKWIHSTSKSGQWSQNSYNVSKAWLKLGLKERCITRD-L 505 Query: 215 DWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDI 267 WG+++P + + YVW DA YL+ T N ++W P ++ + +GKD Sbjct: 506 KWGVQVPLEEYKDKVFYVWFDAPIGYLSITA---NFIKDWKQWWMNPENVELFQFMGKDN 562 Query: 268 LRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGN-VIDPIEVIEEVGVDA 324 + FH + +P+ L+ L L K + + ++ ++ K SKS G V E+ + Sbjct: 563 VPFHTVIFPSTLMGTGLDYTLLKTISTTEYLNYEDGKFSKSRGTGVFGDNAQNTEIPNEI 622 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GA 382 RY+L+ D + + + N +L +GNLV+R+++ I K+Y+ IP Sbjct: 623 FRYYLLANRPEKSDTVFTWNDFANKNNNELLPNLGNLVNRALNFIYKNYNKQIPQVELNQ 682 Query: 383 FTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 T DE +++ ++ E E + I AL + + L S V++Y +K WE ++ Sbjct: 683 LTPKDEEFINLFLNKFKTEYLEAFEKVEIKDALRKAMELSSLVNKYIQDEKAWEKEQKES 742 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 R+ +L+V V IR ++ L++ F+P ++ KI Sbjct: 743 KRSDVILFVAVNAIRFVSALIEPFMPSVSAKI 774 >gi|327310210|ref|YP_004337107.1| methionyl-tRNA synthetase [Thermoproteus uzoniensis 768-20] gi|326946689|gb|AEA11795.1| methionyl-tRNA synthetase [Thermoproteus uzoniensis 768-20] Length = 568 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 126/512 (24%), Positives = 227/512 (44%), Gaps = 46/512 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K I +A Y + PH+G+ ++ ADV AR+ RL G +V+F +G+D HG I A Sbjct: 3 KFVIGSAWPYVQSVPHLGNMIGSVLSADVYARYLRLRGHEVVFVSGSDMHGTPIEVEAIQ 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV + + + ++ +IS+D + T H + + +KKI + G ++ Sbjct: 63 LGVDPQDYAMRMHGIVAELFRRWNISFDLYTHTHSNTHIEFTKDFFKKIYENGYVFTQED 122 Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNP--------------VQW 159 Y D+ + D E +G + P +W Sbjct: 123 ELPYCPNDKIFLPDRFVIGKCPYCGYERARGDQCERCGRLLEPRLLIEPRCAVCGAKPEW 182 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + ++ L +D + Y E + E LP R + +K GL+ +++R WGI Sbjct: 183 RRTKHWYLDLRKLEDAVRRYVEGNKE--LPQNAREMALGILKEGLRPRAITRDN-KWGIP 239 Query: 220 --IPDDPQYIMYVWIDALTNYLTTTG-YLDN---PDGSKAKFW--PADLHV--IGKDILR 269 P +YVW +A+ Y++ Y + PD + +FW P+ V +GKD + Sbjct: 240 APFPGAEGKTIYVWFEAVLGYISAVKEYFEKRGEPDRWR-EFWLDPSTKAVFFVGKDNIP 298 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHG--FILHKGEKISKS--LGNVIDPIEVIEEVGVDAL 325 FH I PA +++ ++ + ++ ++G+K SKS G ID E ++ + VD Sbjct: 299 FHVIILPALIMANGGGYTTRLTTSSTEYLNYEGDKFSKSRRWGIWID--EALKLMPVDYW 356 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 R+ LV +D + + VN L + +GN R +S I + G++P PG T Sbjct: 357 RFVLVYMRPENRDVDFTWQTAVEVVNKVLNDDVGNFAHRVLSFIKTRFGGVLPGPGPSTP 416 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 D + ++ ++ + + AL + + E ++Y + + PW+L K P+ A Sbjct: 417 PDAEFVEAVAKYVKSAEAHYDRIELKEALMDAVEIAREGNKYLNLRAPWQLVKERPEEAG 476 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 TV+Y + + + LA LL +P A K++ ++ Sbjct: 477 TVMYNSYKALMALAALLYPVIPSSAEKLWSMM 508 >gi|302526675|ref|ZP_07279017.1| methionyl-tRNA synthetase [Streptomyces sp. AA4] gi|302435570|gb|EFL07386.1| methionyl-tRNA synthetase [Streptomyces sp. AA4] Length = 359 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 81/235 (34%), Positives = 129/235 (54%), Gaps = 13/235 (5%) Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 +HV+GK ILRFHA+YWPA LLSA LP +F H ++ G KISKS GN + P ++I++ Sbjct: 137 VHVLGKGILRFHAVYWPALLLSAGERLPDTIFVHDYLTVYGAKISKSAGNTVRPTDLIDQ 196 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 G DA+R++L+RE+A D + +D L R + +LANG+GNLV R +S+ + G I Sbjct: 197 YGADAVRWWLLREVAPLGDTDFTEDRLIARADDELANGLGNLVHRVLSLARR--TGRIVP 254 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 G ++ S+ R I + + A ++ ++++ +RY + +PW L+ Sbjct: 255 AGPL----RTVHSLADR----IDAALADFDFRSATGALVQVIADANRYVEQTRPWALRGD 306 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494 D+A L V R+LA L F+P A ++ L + R + L Q+ + Sbjct: 307 ELDQA---LGTVVSTCRELATELSPFLPDRAARLHAQLDRGEPARLYPRLRQQPR 358 >gi|190575365|ref|YP_001973210.1| methionyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] gi|226710936|sp|B2FPT0|SYM_STRMK RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|190013287|emb|CAQ46921.1| putative methionyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] Length = 692 Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 128/495 (25%), Positives = 197/495 (39%), Gaps = 42/495 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R R+ G F D HG I AA+ AGVT Sbjct: 7 VTTALPYANGPLHLGHLVGYIQADIWVRARRMSGGKAWFVCADDTHGTPIMLAAEKAGVT 66 Query: 69 TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A +++D + T + + K+ G I + + + Sbjct: 67 PETFIANIQASHERDFA-AFGVAFDHYDSTNSAANKALTEQFYLKLEAAGHISRRSVAQF 125 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162 Y + D V G+ QY A + P E Sbjct: 126 YDPAKGMFLPDRYVKGICPNCGSPDQYGDNCEVCGATYAPTDLKEPRSVISGATPEMRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222 E +FF + + L + + E ++ + GL+ +SR +G +IP Sbjct: 186 EHFFFEVGHFDAFLREWLAGDVALPGVKAKLGEWLN-AEGGLRAWDISRDAPYFGFQIPG 244 Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYWP 276 P YVW+DA YL++ L G +A H IGKDI+ FH ++WP Sbjct: 245 QPGKYFYVWLDAPIGYLSSFQTLCGRIGEDFEAHLRAGTSTELHHFIGKDIVNFHGLFWP 304 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIAC 335 A L P ++ +G++ G K+SKS G + ++ + +ALRY+ + Sbjct: 305 AVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDAGLEPEALRYYYAAKSGG 364 Query: 336 GKDGFYDKDG-LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 G D G RVNADL NL SR I K +DG + A D + Sbjct: 365 GVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFISKRFDGQL----AAQLPDAAQYQRF 420 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTV 452 L IRE + A+ ++L E +RY D KPW + K A V + Sbjct: 421 VDGLAPIREAYERNDPAAAIRLTMTLADEANRYIDDVKPWVIAKQEGADAQLQAVCSQGL 480 Query: 453 EVIRQLAILLQAFVP 467 + R L L+ +P Sbjct: 481 NLFRVLVTALKPVLP 495 >gi|145642100|ref|ZP_01797670.1| tellurite resistance protein TehB [Haemophilus influenzae R3021] gi|145273179|gb|EDK13055.1| tellurite resistance protein TehB [Haemophilus influenzae 22.4-21] Length = 548 Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 92/321 (28%), Positives = 163/321 (50%), Gaps = 16/321 (4%) Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 E E +FF L A++ L + S L E N++ + +SGL+ +SR +G +I Sbjct: 53 ESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFEI 109 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHAIY 274 P YVW+DA Y+ + L +G +FW A+L H IGKDI+ FH+++ Sbjct: 110 PGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIVYFHSLF 169 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 WPA L + P VF+HG++ G K+SKS G I + + + LRY+ ++ Sbjct: 170 WPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAKLN 229 Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 +D ++ + +RVN D+ N + NL SR+ I K ++G + A DE++ + Sbjct: 230 DRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDEALFAE 285 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451 + ++I +++ ++A+ ++++L + ++Y D + PW + K A V + Sbjct: 286 FTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCSMG 345 Query: 452 VEVIRQLAILLQAFVPKLANK 472 +E+ R L L+ +PKLA + Sbjct: 346 IELFRVLMSYLKPVLPKLAER 366 >gi|326519092|dbj|BAJ96545.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 635 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 119/517 (23%), Positives = 220/517 (42%), Gaps = 45/517 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + +++A+ Y N PH+G+ ++ ADV AR+ RL G +VL+ GTDE+G A Sbjct: 54 RRNVLVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGHNVLYVCGTDEYGTATENRA 113 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G + D+ +++ + +I++D F RT+ + + C+ ++ K+ D + + Sbjct: 114 LEEGCSPLQICDKYHAIHKEVYEWFNINFDHFGRTSTPQQTEICQSIFSKLLDNNWLSEN 173 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y + + D V + + G + D E Sbjct: 174 TMQQLYCESCQRFLADRFVVGSCPVEGCGNDTARGDQCDRCGRLLNSTELIDPRCKVCEG 233 Query: 183 HP----------EFILPIERRNEVI------------------SFVKSGLKDLSLSRKTF 214 P E L E+ + I +++K GLK ++R Sbjct: 234 IPIVRDTDHLFLELPLLKEQLEKYIDEASATGSWSQNAVRITNAWLKEGLKPRCITRD-L 292 Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKDILR 269 WG+ +P + + YVW DA Y++ T P+ K P ++ + +GKD + Sbjct: 293 KWGVPVPHEKYKDKVFYVWFDAPIGYISITACY-TPEWEKWWKNPENVELYQFMGKDNVP 351 Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALR 326 FH + +P+ LL N L K + ++ ++ K SK+ G V + D R Sbjct: 352 FHTVMFPSALLGTGENWTLMKNISVTEYLNYESGKFSKTKGIGVFGNDAKATNIPADVWR 411 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP-TPG 381 Y+L+ D + +GL+ + N +L N +GN + R +S I K Y +IP P Sbjct: 412 YYLLSNRPEASDAVFTWEGLQIKHNNELINNLGNFIYRVLSFIAKPEGAGYGSIIPEAPN 471 Query: 382 AFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 A T +S+ ++++ + M + + L +++ SE + Y + W+L K + Sbjct: 472 ANTHPLSQSLAETVGNLIEQYIDAMDKVKLKQGLKIAMAISSEGNAYLQESQFWKLYKQD 531 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P +TV+ + ++ LA LL+ F+P + + L Sbjct: 532 PASCATVMKTSAGLVYLLACLLEPFMPSFSKDVLQQL 568 >gi|116515014|ref|YP_802643.1| hypothetical protein BCc_072 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256868|gb|ABJ90550.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 547 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 126/511 (24%), Positives = 219/511 (42%), Gaps = 58/511 (11%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A Y N H+GH E I AD+ R+HR+ V+F D HG I ++N Sbjct: 6 DKILVTCAFPYANGDIHLGHLLEQIQADIWVRYHRMKHRSVVFICSDDTHGTAIMLKSKN 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 ++++ + + + +D L S +D + T + + D C ++K + K I + Sbjct: 66 MNISSEKLI--HDIGIKHKSDFLKFSIIHDYYSSTHSQVNKDLCCNIFKILKKKKFIKEK 123 Query: 123 CYSGWY------------------SLRDEAYYNDDEVYKGADGQYYNAQH--NPVQWM-- 160 S Y + Y D+ Y GA +YNA NP+ + Sbjct: 124 IISQLYDKKLNMFLPDRFIKGICPKCKSNNQYGDNCDYCGA---FYNAIELLNPISELSK 180 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + FF+LS ++ L ++ S + + N+++S L ++SR Sbjct: 181 TKPIIKQSNHLFFKLSYFKKFLKTWINSGITQKSILNKLNDLLS---KKLCSWNISRDKP 237 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDI 267 +G +IP YVW+DA Y++ N + + FW H IGKDI Sbjct: 238 YFGFEIPGYIDKFFYVWMDAPIGYISCIQEFCNINKTVNFNDFWSKHSKYQLFHFIGKDI 297 Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + FH ++WPA L P +F HG++ K+SKS G++I + + D+LRY Sbjct: 298 IYFHCLFWPAILEGCEYRKPTNIFVHGYVTLNKLKLSKSKGSIITANQWLSYFDSDSLRY 357 Query: 328 FLVREIACGKD----GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 + +++ + YD R+N+D+ N + NL SRS LK Y I + Sbjct: 358 YFASKLSNNIEDIEINLYD---YAYRINSDIVNNVINLASRSY-FFLKKYFFSILSNNLL 413 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NP 441 E + ++ E + LI + ++ L + ++YF+ QKPW L K Sbjct: 414 KEKLYKKFVSSIKDIENFFEKRKFSLI---IQKIRFLSQKANKYFNDQKPWVLIKNIIYK 470 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 + + +++ + R L L+ +P L K Sbjct: 471 SKVHDICSLSINLFRILMTFLKPIMPTLVKK 501 >gi|294676114|ref|YP_003576729.1| methionyl-tRNA synthetase [Rhodobacter capsulatus SB 1003] gi|294474934|gb|ADE84322.1| methionyl-tRNA synthetase [Rhodobacter capsulatus SB 1003] Length = 569 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 124/518 (23%), Positives = 217/518 (41%), Gaps = 46/518 (8%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R G +V+F TDEHG AA AG Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLYARYLRGRGHEVMFICATDEHGTPAELAAAKAGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + +A +S+D F R++ ++ + K ++D+G I + Sbjct: 66 PVADYCAEMHDVQAAIAGGFRLSFDHFGRSSSPQNRALTQHFAKALADQGLIREVTEKQM 125 Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPV---------------QWME 161 YS+ D + D E +G Q +PV + E Sbjct: 126 YSVTDGRFLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPVDLINPRSVISGSTDLEMRE 185 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 + F R SA +DKL ++ +S ++ + + F GL+D ++R WG+ Sbjct: 186 TKHLFLRQSAMKDKLAAWIDSKTDWPVLSTSIAKKWLFDGEGLQDRGITRD-LSWGVPAQ 244 Query: 222 DDPQ-------YIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPAD--------LHVIGK 265 D + YVW DA Y+ T + + G A++W D +GK Sbjct: 245 FDGAPWAGMEGKVFYVWFDAPIEYIAGTQEWAEKTGGDWARWWRLDQGAEDVTYTQFMGK 304 Query: 266 DILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323 D + FH + +P+ +L + P L + S ++ + G + S S G + + + + D Sbjct: 305 DNVPFHTLSFPSTILGSAEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALGILPSD 364 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 R++L+ D + + + VN DLA+ +GNLVSR + +P Sbjct: 365 YWRWWLLSHAPESADAEFTWENFQASVNKDLADVLGNLVSRVTKFCNSKFGTEMPATVVL 424 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 TE + ++++ L + M + RA ++ +L + Y A PW + KT+ Sbjct: 425 TERETALMAQFRDGLAAYEKAMDEIHVRRAAEELRALWVLGNEYLQAAAPWSVVKTDEAA 484 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 A ++ + +IR A+L + F+P A I L D Sbjct: 485 ARGIIAFALNLIRLYAVLSRPFIPDAAQAIMTALNCDD 522 >gi|260425221|ref|ZP_05779201.1| methionyl-tRNA synthetase [Citreicella sp. SE45] gi|260423161|gb|EEX16411.1| methionyl-tRNA synthetase [Citreicella sp. SE45] Length = 570 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 121/526 (23%), Positives = 222/526 (42%), Gaps = 57/526 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R G +VLF TDEHG AA AG Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLYARYQRARGNEVLFLCATDEHGTPAELAAAKAGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + +A+ +S+D F R++ ++H + ++++G I + Sbjct: 66 PVAEYCAEMHEVQARIAEGFRLSFDHFGRSSSPQNHALTQHFAGVLAERGLIREVSERQM 125 Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 YS D + D E +G Q +PV + +S D Sbjct: 126 YSPTDGRFLPDRYIEGTCPNCGFEDARGDQCDNCTKQLDPVDLINPRSV---ISGATD-- 180 Query: 177 LSYYESHPEFILPIERRNEVISFVKS--------------------GLKDLSLSRKTFDW 216 L E+ F+ + R E+ ++ S GL+D ++R DW Sbjct: 181 LEMRETKHLFLCQSQIRTEIEDWIDSKSDWPVLTTSIAKKWLHDGDGLQDRGITRD-LDW 239 Query: 217 GIKI-------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD-------- 259 GI + P + YVW DA Y+ + ++D G ++W D Sbjct: 240 GIPVKKGAEDWPGMEGKVFYVWFDAPIEYIACSQEWVDAGKGDDWERWWRTDKGAEDVTY 299 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 +GKD + FH + +PA +L + P L + S ++ + G + S S G + + + Sbjct: 300 TQFMGKDNVPFHTLTFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQAL 359 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E + D R++L+ D + + + VN DLA+ +GN SR + ++ Sbjct: 360 EILPADYWRWWLLSHAPESSDAEFTWENFQTSVNKDLADVLGNFASRVTKFCRSKFGEVV 419 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G +E +++ + ++E E+M + + ++ A + + + Y PW Sbjct: 420 PEGGTPGAREEQLIADLTAKVREYEEHMAHAEVRKSAAALRAAWVLGNEYLQEAAPWSTF 479 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 KT+P+ A+ + + + VIR A++ Q F+P + ++ L D++ Sbjct: 480 KTDPEAAAAQIRLALNVIRLYAVISQPFIPDASAQLLTALNTTDDS 525 >gi|254510427|ref|ZP_05122494.1| methionyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] gi|221534138|gb|EEE37126.1| methionyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] Length = 577 Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 111/524 (21%), Positives = 223/524 (42%), Gaps = 49/524 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++AI Y N H+G+ + AD+ AR+ R G +V+F TDEHG AA Sbjct: 8 RILITSAIPYINGIKHLGNLIGSQLPADLYARYQRGRGNEVMFLCATDEHGTPAELAAAK 67 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + D+A+ +S+D F R++ ++ + K+ + G I + Sbjct: 68 AGKPVAEYCADMYAVQADIANRFGLSFDHFGRSSSDQNKHLTQHFAGKLEEAGLIREVSE 127 Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG--------- 164 YS D + D + +G + Q +P +E Sbjct: 128 KQVYSNTDGRFLPDRYIEGTCPNCGYDRARGDQCENCTKQLDPTDLIEPRSAISGSTDLE 187 Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + R SA +D+L ++ +S ++ + + GL+D ++R DWG+ Sbjct: 188 VRETKHLYLRQSALKDQLDAWIDSKSDWPILTTSIAKKWLHDGDGLQDRGITRD-LDWGV 246 Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD-------- 259 + P + YVW DA Y+ G +G ++W D Sbjct: 247 PVKKGDQDWPGMEGKVFYVWFDAPIEYIACAGEWAEANGKTDADWERWWRTDKGADDVRY 306 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 + +GKD + FH + +PA +L + P + + S ++ + G + S S G + + + Sbjct: 307 VQFMGKDNVPFHTLSFPATILGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVFMDQAL 366 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E + D R++L+ D + + ++ VN DLA+ +GN VSR + + Sbjct: 367 EILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSKFGEAV 426 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G F ++ +++ ++ ++ +M+ + ++ ++ ++ + Y + PW Sbjct: 427 PEGGEFGAREQELIAELTKRIRAYEGHMEAMEVRKSAQELRAIWVAGNEYLQSAAPWSTF 486 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 K +P +A+ + + + +IR A+L F+P+ + ++ + D Sbjct: 487 KEDPAQAAAQVRLGLNLIRLYAVLSAPFIPETSARMLSAMNTLD 530 >gi|91086451|ref|XP_969201.1| PREDICTED: similar to AAEL014709-PA [Tribolium castaneum] gi|270010323|gb|EFA06771.1| hypothetical protein TcasGA2_TC009707 [Tribolium castaneum] Length = 926 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 129/548 (23%), Positives = 245/548 (44%), Gaps = 62/548 (11%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ +++ DV ARF R+ + LF GTDE+G A Sbjct: 258 ILITSALPYVNNVPHLGNIIGCVLSSDVFARFCRICNYNTLFIGGTDEYGTATETKALEE 317 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G++ + D+ +D+ + +IS+D F R++ + + C+ ++ ++++ G ++ Sbjct: 318 GLSCQAICDKYYAIHKDIYNWFNISFDYFGRSSSPQQTELCQDMFLQLNNNGFMFTEAVE 377 Query: 126 GWYSLRDEAYYNDDEVYKGAD-----------------GQYYNAQH--NP--------VQ 158 + + + Y D V G G+ NA NP + Sbjct: 378 QLHCEKCDRYLADRFVEGGCPHPGCNYEDARGDQCDGCGKLVNAVELKNPRCKICRSTPK 437 Query: 159 WMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVI--SFVKSGLKDLSLSRKTFD 215 +F L + LL + +S P + +VI ++++ GLK ++R Sbjct: 438 LKTSNQFFIDLPKLEPLLLHWMKQSAPGW----SSNAQVIGKAWIREGLKPRCITRD-LK 492 Query: 216 WGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVI------GK 265 WG+ +P D + YVW DA Y++ ++ K + W P H I K Sbjct: 493 WGVPVPLKDFKDKVFYVWFDAPIGYMS----INKAYTEKWEEWWRPKPEHKITLYQFMAK 548 Query: 266 DILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322 D + FHA+ +PA LL AN + + ++ ++ K SKS G V + Sbjct: 549 DNVPFHAVMFPACLLGANRGYITVSHIMATEYLNYEDGKFSKSRGVGVFGNDARDTGIPS 608 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R++L+ +D + L + N++L N +GN ++R++ +++ +P Sbjct: 609 DVWRFYLLYVRPESQDSSFSWSDLATKNNSELLNNLGNFINRALVFAKNNFNCTVPE-MQ 667 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 T+ D ++L +C+R L+ ++ + + ++S+ ++Y +PW L K P+ Sbjct: 668 LTKDDFTLLVLCTRELKGYVNCLEKCKLRDGIRHILSISRLGNQYMQFNQPWVLLKGTPE 727 Query: 443 ---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLKPGF 497 RA+TV+ + + LA LL ++P +N + L A+ +S++ Q L PG Sbjct: 728 EKVRAATVVGLCCNIAALLATLLHPYMPDTSNTLKKQLNCANTALTPESIEIRQLLPPG- 786 Query: 498 MLHKTFDP 505 HK +P Sbjct: 787 --HKLGNP 792 >gi|217970006|ref|YP_002355240.1| methionyl-tRNA synthetase [Thauera sp. MZ1T] gi|217507333|gb|ACK54344.1| methionyl-tRNA synthetase [Thauera sp. MZ1T] Length = 733 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 132/532 (24%), Positives = 221/532 (41%), Gaps = 63/532 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH I AD+ R+ R+ G V + D HG + A+ Sbjct: 4 KLLVTNALPYANGDIHLGHLVGYIQADIWVRYQRMRGHSVHYVCADDTHGTPVMLRAEKE 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + +++ + + RD +++D++ T + ++ ++ G I Sbjct: 64 GLTPEQLIERVHGEHLRDFT-AFGVAFDNYHSTHSAENRFYAEDIYARLKAGGLIDTRSI 122 Query: 125 SGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWME------------ 161 +Y E + D E K GA QY A + P + Sbjct: 123 EQYYDPVKEMFLPDRFIKGECPKCGAPDQYGDNCEACGAAYAPTELKNPYSAVSGAKPVL 182 Query: 162 --EEGYFFRLS-----AYQDKLLSYYESHPEFILPIERRNEVISFV--------KSGLKD 206 E YFFRLS A+ + + E L +E N++ ++ ++ L D Sbjct: 183 KTSEHYFFRLSDERAVAFLREWTRGTNAAGERRLQMEAANKMKEWLGENATEEGENTLSD 242 Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------- 259 +SR +G +IP P YVW+DA YL + L + + + Sbjct: 243 WDISRDAPYFGFEIPGAPGKYFYVWLDAPIGYLASFRNLAAKRAAAGETIAVEDYTDAAR 302 Query: 260 --------LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311 +H IGKDIL FHA++WPA L A P ++ +GF+ G K+SKS G I Sbjct: 303 AAAAGTEMVHFIGKDILYFHALFWPAMLKFAGYATPSRLCVNGFLTVDGAKMSKSRGTFI 362 Query: 312 DPIEVI-EEVGVDALRYFLV-REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 I +++ + LRY+ + +D + D + +VN++L N+ SR I Sbjct: 363 TAHSYIAQKLDPEWLRYYFAGKSNGTMEDVDLNLDDMIAKVNSELVGKFVNIASRCAGFI 422 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 K +DG + A ++ + RV E + RAL +V+ L ++Y + Sbjct: 423 GKRFDGRLGEADAAACAEFAAAWSEGRVATAFEERDYS----RALREVMRLADLANQYVN 478 Query: 430 AQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 KPWEL + A TV + + R L L+ +P LA ++ L + Sbjct: 479 DHKPWELARQEGQEARLHTVCSTALTMFRDLTRYLKPVLPALAAQVETFLAI 530 >gi|297849444|ref|XP_002892603.1| hypothetical protein ARALYDRAFT_312128 [Arabidopsis lyrata subsp. lyrata] gi|297338445|gb|EFH68862.1| hypothetical protein ARALYDRAFT_312128 [Arabidopsis lyrata subsp. lyrata] Length = 583 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 127/524 (24%), Positives = 232/524 (44%), Gaps = 61/524 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV AR+ RL G + ++ GTDE+G A Sbjct: 13 KRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIYICGTDEYGTATETKA 72 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T + D+ +++ D DIS+D F RT+ +H C+ ++ K+ + I + Sbjct: 73 LEENRTPREICDKYHAIHKEVYDWFDISFDQFGRTSTPQHTQVCQEIFNKLWENKLISEN 132 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWM----------- 160 Y + D V Y A G + NP + + Sbjct: 133 TIQQLYCDTCNKFLADRLVEGSCPLCNYDSARGDQCESCGKLLNPTELIAPRCKVCQTTP 192 Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---FVKSGLKDLSLSRKTF 214 + + F L + +L +Y + RN V + +++ GL+ ++R Sbjct: 193 EIRDTDHLFIDLPKLKAQLEAYINGTS--VRGSWSRNAVQTTNAWIREGLQQRCITRD-L 249 Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTG--------YLDNPDGSKAKFWPADLHVIG 264 WG+ +P + + YVW DA Y++ T + NP ++ +G Sbjct: 250 KWGVPVPHEKYKDKVFYVWFDAPIGYVSITSCYTSEWEQWWKNPKNAEL------YQFMG 303 Query: 265 KDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVG 321 KD + FH + +P+ L N L K V ++ ++G K SKS G + +V + + Sbjct: 304 KDNVPFHTVMFPSTQLGTGENWTLMKTVSVTEYLTYQGGKFSKSKGVGLFGNDVKDTNIP 363 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMI 377 V+ RY+L+ D ++ + L+ ++N +L +GN V+R VS I K Y +I Sbjct: 364 VEVWRYYLLINRPEVSDTSFEWEDLQAKLNDELLKNLGNFVNRVVSFIAKPENIGYGSII 423 Query: 378 P-TPGAFTESDESILSVCSRV---LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 P PGA ES + +S+ +V ++E E M+ + + L + + E + Y + Sbjct: 424 PDAPGA--ESHQLTMSLSEKVGKLVEEYVEAMEKVKLKQGLKTAMLISGEGNAYLQTSEF 481 Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 W+L K + + V+ ++ LA LL+ F+P ++++F L Sbjct: 482 WKLYKEDKPSCAIVVRSAAGLVHLLARLLEPFMPSFSHEVFKQL 525 >gi|163738597|ref|ZP_02146011.1| methionyl-tRNA synthetase [Phaeobacter gallaeciensis BS107] gi|161387925|gb|EDQ12280.1| methionyl-tRNA synthetase [Phaeobacter gallaeciensis BS107] Length = 575 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 114/531 (21%), Positives = 224/531 (42%), Gaps = 49/531 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M + + I++AI Y N H+G+ + AD+ AR+ R G +V+F TDEHG Sbjct: 1 MDDMARFLITSAIPYINGIKHLGNLVGSQLPADLYARYQRARGHEVMFLCATDEHGTPAE 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AA AG + + +A +S+D F R++ ++H + K++++G I Sbjct: 61 LAAAKAGKPVADYCAEMHEVQAGIAKGFGLSFDHFGRSSSPQNHALTQHFAGKLAEQGLI 120 Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160 + YS D + D E +G + Q +P + Sbjct: 121 REVTEQQVYSHTDGRFLPDRYIEGTCPNCGYERARGDQCEECTKQLDPTDLIDPRSAISG 180 Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 E + + S +D+L + S ++ + + GL+D ++R Sbjct: 181 STDLEVRETKHLYLCQSQLKDQLDDWINSKSDWPVLTTSIAKKWLHDGDGLQDRGITRD- 239 Query: 214 FDWGIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADL-- 260 DWG+ + P + YVW DA Y+ + + +G ++W D+ Sbjct: 240 LDWGVPVKKGDADWPGMEGKVFYVWFDAPIEYIAASREWADANGKTDADWQRWWRTDMGA 299 Query: 261 ------HVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVID 312 +GKD + FH + +PA +L + P + + S ++ + G + S S G + Sbjct: 300 EDVKYVQFMGKDNVPFHTLSFPATILGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVF 359 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 + +E + D R++L+ D + + ++ VN DLA+ +GN VSR Sbjct: 360 MDQALEILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSK 419 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 Y +P + E++++++ S + +M + ++ ++ ++ + Y + Sbjct: 420 YGEAVPAGNDYGEAEQALIDEISTRVTAYEGHMAAMDVRKSAQELRAIWVAGNEYLQSVA 479 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 PW + KT+PD+A+ + + + +IR A+L F+P ++ L D + Sbjct: 480 PWSVFKTDPDQAAAQVRLGLNLIRLYAVLSAPFIPDATERLLAALQTEDRS 530 >gi|56477937|ref|YP_159526.1| methionyl-tRNA synthetase [Aromatoleum aromaticum EbN1] gi|68565963|sp|Q5P239|SYM_AZOSE RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|56313980|emb|CAI08625.1| methionyl-tRNA synthetase [Aromatoleum aromaticum EbN1] Length = 718 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 133/529 (25%), Positives = 214/529 (40%), Gaps = 61/529 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K+ ++ A+ Y N H+GH I D+ R+ R+ G V + D HG + A+ Sbjct: 4 KILVTNALPYANGDIHLGHLVGYIQGDIWVRYQRMRGNTVHYVCADDTHGTPVMLRAEKE 63 Query: 66 GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + + + RD D +++D++ T + ++ K+ I Sbjct: 64 GITPEALIGRVHGEHLRDFTD-FGVAFDNYHSTHSVENRAYAEDVYTKLKAAELIDTRAI 122 Query: 125 SGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWME------------ 161 +Y E + D E K GA QY A + P + Sbjct: 123 EQFYDPVKEMFLPDRFIKGECPKCGAADQYGDNCEACGAAYAPTELKNPHSAVSGAKPVL 182 Query: 162 --EEGYFFRLS-----AYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKD 206 E YFFRLS A+ + + L +E N E + + L D Sbjct: 183 KTSEHYFFRLSDPRAVAFLREWTRGTNAAGTRRLQVEAANKMKEWLGDETVGDGGNTLSD 242 Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL----------DNPDGSKAKFW 256 +SR +G +IP P YVW+DA Y + L D D +A+ Sbjct: 243 WDISRDAPYFGFEIPGAPGKYFYVWLDAPIGYFASFRNLAEQRGDIAVDDFTDAVRAETA 302 Query: 257 PADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315 ++ H IGKDIL FHA++WPA L A P ++ +GF+ G K+SKS G I Sbjct: 303 GTEMVHFIGKDILYFHALFWPAMLRFAGYRTPTQLCVNGFLTVDGAKMSKSRGTFITARS 362 Query: 316 VIEE-VGVDALR-YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 + + + LR YF + +D D + +VN+DL N+ SR I K + Sbjct: 363 YVSRGLNPEWLRYYFATKSNGTMEDVDLSLDDMVAKVNSDLVGKYVNIASRCAGFIAKRF 422 Query: 374 DGMIPTPGAFTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 DG + +D E+ + + I + + RAL +++ L ++Y + K Sbjct: 423 DGKLGASDPQATADFEAAFAAGT-----IAHAYEERDYGRALREIMRLADLANQYVNDHK 477 Query: 433 PWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 PWEL K A V + R L + L+ +P LA K+ L + Sbjct: 478 PWELAKQEGQEAHLHVVCSTALTHFRDLTLYLKPVLPALAQKVEAFLAI 526 >gi|83941176|ref|ZP_00953638.1| methionyl-tRNA synthetase [Sulfitobacter sp. EE-36] gi|83846996|gb|EAP84871.1| methionyl-tRNA synthetase [Sulfitobacter sp. EE-36] Length = 570 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 118/517 (22%), Positives = 219/517 (42%), Gaps = 47/517 (9%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R G +VLF TDEHG AA AG Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLYARYQRGRGQEVLFLCATDEHGTPAELAAAKAGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + +A+ +S+D F R++ ++ + + D+G I + Sbjct: 66 PVAEYCAEMHEVQARIAEGFGLSFDHFGRSSSAQNKALTQHFAAALYDQGLIEEVEQRQI 125 Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNP---------------VQWME 161 YS D + D E +G Q +P ++ Sbjct: 126 YSETDGRFLPDRYVEGTCPNCGFEDARGDQCDNCTKQLDPEDLINPRSTVSGATDLEMRA 185 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI- 220 + F R S +DKL + S ++ + + GL+D ++R DWG+ + Sbjct: 186 TKHLFLRQSQMKDKLNEWINSKADWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGVPVK 244 Query: 221 ------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFW-----PAD----LHVIG 264 P + YVW DA Y+ ++D GS + W AD +G Sbjct: 245 RGDADWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGSDWESWWRTDKGADDVRYTQFMG 304 Query: 265 KDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 KD + FH + +PA ++ + P L + S ++ + G + S S G + + +E + Sbjct: 305 KDNVPFHTLSFPATIMGSQEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALEILSA 364 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R++L+ D + + + VN DLA+ +GN +SR + +P G Sbjct: 365 DYWRWWLLSHAPETSDAEFTWENFQSSVNKDLADVLGNFISRITKFCRSKFSEDVPAAGE 424 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 + + ++++ + + + M+ + ++ A++ ++ + + Y AQ PW KT+PD Sbjct: 425 YGPEEHALIADLTERVARYQTAMEAMEVRKSAAELRAIWAAGNEYLQAQAPWTTFKTDPD 484 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +A+ + + + +I A+L F+P A + D + V Sbjct: 485 KAAAQVRLALNLIPLYAVLSAPFIPTAAASMLDSMKV 521 >gi|254522917|ref|ZP_05134972.1| methionyl-tRNA synthetase [Stenotrophomonas sp. SKA14] gi|219720508|gb|EED39033.1| methionyl-tRNA synthetase [Stenotrophomonas sp. SKA14] Length = 693 Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 126/495 (25%), Positives = 197/495 (39%), Gaps = 42/495 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++TA+ Y N H+GH I AD+ R R+ G F D HG I AA+ AG+T Sbjct: 7 VTTALPYANGPLHLGHLVGYIQADIWVRARRMSGGKAWFVCADDTHGTPIMLAAEKAGIT 66 Query: 69 TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F+ + + RD A +++D + T + + K+ G I + + + Sbjct: 67 PETFIANIQAGHERDFA-AFGVAFDHYDSTNSAANKALTEQFYLKLEAAGHISRRSVAQF 125 Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162 Y + D V G+ QY A + P E Sbjct: 126 YDPAKGMFLPDRYVKGICPNCGSPDQYGDNCEVCGATYAPTDLKEPRSVISGATPEMRDS 185 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222 E +FF + + L + + E ++ + GL+ +SR +G +IP Sbjct: 186 EHFFFEVGHFDAFLRDWLAGDVALPGVKAKLGEWLN-AEGGLRAWDISRDAPYFGFQIPG 244 Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYWP 276 P YVW+DA YL++ L G +A H IGKDI+ FH ++WP Sbjct: 245 QPGKYFYVWLDAPIGYLSSFQTLCGKLGEDFESHLRAGTSTELHHFIGKDIVNFHGLFWP 304 Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIAC 335 A L P ++ +G++ G K+SKS G + ++ + +ALRY+ + Sbjct: 305 AVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDAGLEPEALRYYYAAKSGG 364 Query: 336 GKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 G D + RVNADL NL SR I K +DG + A D + Sbjct: 365 GVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFISKRFDGQL----AAQLPDAAQYQRF 420 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTV 452 L IRE + A+ ++L E +RY D KPW + K A V + Sbjct: 421 VDGLAPIREAYERNDPAAAIRLTMTLADEANRYIDDVKPWVIAKQEGADAQLQAVCSQGL 480 Query: 453 EVIRQLAILLQAFVP 467 + R L L+ +P Sbjct: 481 NLFRVLVTALKPVLP 495 >gi|254440533|ref|ZP_05054027.1| methionyl-tRNA synthetase [Octadecabacter antarcticus 307] gi|198255979|gb|EDY80293.1| methionyl-tRNA synthetase [Octadecabacter antarcticus 307] Length = 570 Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 117/524 (22%), Positives = 221/524 (42%), Gaps = 57/524 (10%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R G +VLF TDEHG AA AG Sbjct: 6 ITSAIPYINGIKHLGNLIGSQLPADLYARYLRGRGHEVLFLCATDEHGTPAELAAAKAGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + D+A +S+D + R++ ++ + ++D G I + + Sbjct: 66 PVADYCAEMWTVQADLATRFGLSFDHYGRSSSLQNRALTQHFAGVLADNGLIEERMETQM 125 Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 YS D Y D E +G Q +PV + + +S D Sbjct: 126 YSHEDGRYLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPVDLINP---YSTISGSTD-- 180 Query: 177 LSYYESHPEFILPIERRNEVISFVKS--------------------GLKDLSLSRKTFDW 216 L ++ ++L + ++E+ +++ S GL+D ++R DW Sbjct: 181 LEMRDTKHLYLLQSKLKDEIEAWIDSQTGWPVLTTSIAKKWLNDGDGLQDRGITRD-LDW 239 Query: 217 GIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-------- 259 G+ + P + YVW DA Y+ + G + A++W D Sbjct: 240 GVPVMRGDAPWPGMEDKVFYVWFDAPIEYIACAQEWSDATGGQDWARWWRTDKGADDVRY 299 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF--SHGFILHKGEKISKSLGNVIDPIEVI 317 +GKD + FH + +PA ++ + P + + S F+ + G + S S G + + + Sbjct: 300 TQFMGKDNVPFHTLSFPATIIGSGEPWKRVDYLKSFNFLNYDGGQFSTSRGRGVFMDQAL 359 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E + D R++L+ D + D + N DLA+ +GN VSR + + Sbjct: 360 EILPADYWRWWLLSRAPETSDSEFTWDAFQVDTNKDLADVLGNFVSRVTKFCRSKFSEAV 419 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G + +++ +++ L + M + +A A++ ++ + + Y A PW + Sbjct: 420 PAGGEYGDAENKLIADLQTRLTTYQAAMDAIEVRKAAAELRAMWAAGNEYLQAAAPWSVF 479 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 K +PD+A+ + + + +IR A+L F+P + + + D Sbjct: 480 KEDPDKAAAQIRLALNLIRIYAVLSAPFIPTASATLLSAMNTMD 523 >gi|29830946|ref|NP_825580.1| methionyl-tRNA synthetase [Streptomyces avermitilis MA-4680] gi|68566000|sp|Q82F60|SYM_STRAW RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|29608059|dbj|BAC72115.1| putative methionyl-tRNA synthetase [Streptomyces avermitilis MA-4680] Length = 574 Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 128/535 (23%), Positives = 228/535 (42%), Gaps = 58/535 (10%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N H+G+ M+ ADV +R+ R G DVL+ TDEHG AA+ G+ Sbjct: 6 ITSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHDVLYICATDEHGTPAELAAKERGL 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 F Q + + D ++++D F R++ +++ + + +++++ G I + Sbjct: 66 PVDEFCAQAHDAQKAVYDGFELAFDYFGRSSSEQNREITQHFARRLNENGFIEERAIRQV 125 Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP---------VQWME 161 YS D + D V Y A G Q N NP ++ E Sbjct: 126 YSPADGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLINPRSAISGSTDLEVRE 185 Query: 162 EEGYFFRLSAYQDKLLSYYESH----PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + F S Q ++ + H P+ I R+ ++ GL D +++R DWG Sbjct: 186 TKHLFLLQSKLQHEVEEWVARHEEEWPQLASSIARK-----WLNEGLHDRAITRD-LDWG 239 Query: 218 IKIPDD--PQY-----IMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------- 259 + +P D P+ + YVW DA Y+ T + P+ K W D Sbjct: 240 VPVPADTWPELAAEGKVFYVWFDAPIEYIGATKEWSDLDPENRDWKSWWYDADSGENPVR 299 Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEV 316 + KD + FH + +PA L P K + F + + G K S S + Sbjct: 300 YTEFMAKDNVPFHTVMFPATELGVREPWKKVDYVKAFNWLTYYGGKFSTSQKRGVFTDHA 359 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 +E + D RYFL+ D + + VN DLA+ +GN V+R +S K + Sbjct: 360 LEILPADYWRYFLIANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSKKRFGEE 419 Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 +P ES+ + + +L E +M+ +A A + +L S + Y + + PW Sbjct: 420 VPAGAPAGESETKLGEEIAALLAEYESHMETLQFRKAAAALRALWSAGNSYLEEKAPWLE 479 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491 KTNP+ A+ L + +I +++ + F+P + + ++++ + + D+ Sbjct: 480 IKTNPEGAALTLRTAMNLIHLYSVVSEPFIPASSKAMRSAFALSEDTATWVTQDE 534 >gi|321469650|gb|EFX80629.1| hypothetical protein DAPPUDRAFT_318233 [Daphnia pulex] Length = 773 Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 137/550 (24%), Positives = 244/550 (44%), Gaps = 58/550 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 56 ILITSALPYVNNFPHLGNIIGCVLSADVFARYCRLRNYNTLYICGTDEYGTATETKALEE 115 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ + ++ DIS+D F RTT + ++ K+ + + Sbjct: 116 GLTPQQICDKYFKLHDEVYKWFDISFDHFGRTTTPNQTKIAQDIFLKLHRNNYLVEDTME 175 Query: 126 GWYSLRDEAYYNDDEV--------YKGADG-------QYYNA-----------QHNPVQW 159 + + D V Y+ A G + NA +H PV Sbjct: 176 QLLCQHCKIFLADRFVEGTCPLCGYEDARGDQCDKCGKLVNAVELKLPRCKMCRHTPV-I 234 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI--SFVKSGLKDLSLSRKTFDWG 217 + F L +DKL S+ ES VI S++K GLK ++R WG Sbjct: 235 KTSKHLFLDLPKIEDKLTSWMES---VTAGWTHNARVIANSWIKEGLKPRCITRD-LKWG 290 Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPADLHVI-----GKDILR 269 +P + + YVW DA YL+ T Y + + ++W V+ KD + Sbjct: 291 TPVPLEGYTDKVFYVWFDAPIGYLSITACYTEKWE----RWWKNREQVVHYEFMAKDNVP 346 Query: 270 FHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DAL 325 FH++ +P+ L + P L + + ++ ++ K SKS G + +E G+ D Sbjct: 347 FHSVVFPSSQLGTHDPYTLVNHLIATEYLNYEDGKFSKSRGVGVFGNNA-QETGIPADVW 405 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 R++L+ +D + L + N +L N +GN +R++S + K+YD +P+ + Sbjct: 406 RFYLLYVRPESQDSTFSWADLMTKNNTELLNNLGNFANRALSFLEKNYDSCVPS-MTLGQ 464 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--- 442 + +L +R L++ ++N + A+ + S+ ++ A +PW L K+ D Sbjct: 465 EENMLLVRINRELKQYISLLENAKLRDAIRPIFSISRLGNQLMQAAQPWVLIKSTKDEEK 524 Query: 443 -RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQSLDQRLKPGFMLH 500 RA TV+ + +I QL+++L ++P L+ K+ + L V +D N RL G + Sbjct: 525 KRAGTVIGLCANIICQLSVMLLPYMPNLSGKLQEQLGVTSDVNHLIPEFTCRLPAGHRIG 584 Query: 501 KTFDPIFPRF 510 K P+F + Sbjct: 585 KP-APLFQKI 593 >gi|83955735|ref|ZP_00964315.1| methionyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] gi|83840029|gb|EAP79205.1| methionyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] Length = 570 Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 118/517 (22%), Positives = 219/517 (42%), Gaps = 47/517 (9%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R G +VLF TDEHG AA AG Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLYARYQRGRGQEVLFLCATDEHGTPAELAAAKAGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + +A+ +S+D F R++ ++ + + D+G I + Sbjct: 66 PVAEYCAEMHEVQARIAEGFGLSFDHFGRSSSAQNKALTQHFAAALYDQGLIEEVEQRQI 125 Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNP---------------VQWME 161 YS D + D E +G Q +P ++ Sbjct: 126 YSETDGRFLPDRYVEGTCPNCGFEDARGDQCDNCTKQLDPEDLINPRSTVSGATDLEMRA 185 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI- 220 + F R S +DKL + S ++ + + GL+D ++R DWG+ + Sbjct: 186 TKHLFLRQSQMKDKLDEWINSKADWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGVPVK 244 Query: 221 ------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFW-----PAD----LHVIG 264 P + YVW DA Y+ ++D GS + W AD +G Sbjct: 245 RGDADWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGSDWESWWRTDKGADDVRYTQFMG 304 Query: 265 KDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 KD + FH + +PA ++ + P L + S ++ + G + S S G + + +E + Sbjct: 305 KDNVPFHTLSFPATIMGSQEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALEILPA 364 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R++L+ D + + + VN DLA+ +GN +SR + +P G Sbjct: 365 DYWRWWLLSHAPETSDAEFTWENFQSSVNKDLADVLGNFISRITKFCRSKFSEDVPAAGE 424 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 + + ++++ + + + M+ + ++ A++ ++ + + Y AQ PW KT+PD Sbjct: 425 YGPEEHALIADLTERVARYQNAMEAMEVRKSAAELRAIWAAGNEYLQAQAPWTTFKTDPD 484 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +A+ + + + +I A+L F+P A + D + V Sbjct: 485 KAAAQVRLALNLIPLYAVLSAPFIPTAAASMLDSMKV 521 >gi|149435709|ref|XP_001520505.1| PREDICTED: similar to MARS2 protein, partial [Ornithorhynchus anatinus] Length = 136 Score = 136 bits (342), Expect = 9e-30, Method: Composition-based stats. Identities = 67/143 (46%), Positives = 89/143 (62%), Gaps = 7/143 (4%) Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280 P DP +YVW+DAL +YLT TGY P A HV+GKDILRFHA+YWPA LL Sbjct: 1 PGDPTQTVYVWLDALVSYLTVTGY---PGPGAAD----TCHVLGKDILRFHAVYWPALLL 53 Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +A LP P+++ H G K+SKSLGN +DP +E VD RYFL+R G+DG Sbjct: 54 AAGLPPPRRIRVHSHWTVGGRKMSKSLGNAVDPGACLERFTVDGFRYFLLRRGVPGRDGD 113 Query: 341 YDKDGLKKRVNADLANGIGNLVS 363 + + + VNA+LA+ +G L++ Sbjct: 114 FSPEKAEGLVNAELADALGGLLN 136 >gi|254461141|ref|ZP_05074557.1| methionyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083] gi|206677730|gb|EDZ42217.1| methionyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083] Length = 572 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 115/521 (22%), Positives = 223/521 (42%), Gaps = 49/521 (9%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ ARF R G +VLF TDEHG AA AG Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLYARFQRARGHEVLFLCATDEHGTPAELAAAKAGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + ++A +S+D F R++ +++ D + +++D+G I + Sbjct: 66 PVDEYCAEMWDVQGEIAKGFRMSFDHFGRSSSQQNRDLTQHFAGRLADEGLIEEVTEQQI 125 Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPV---------------QWME 161 YS DE + D E +G Q +PV + E Sbjct: 126 YSNTDERFLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPVDLINPYSTISGSTDLEMRE 185 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI- 220 + + R S +D+L + +S ++ + + GL+D ++R WG+ + Sbjct: 186 TKHLYLRQSQMKDQLSDWIDSKDDWPVLTTSIAKKWLHDGDGLQDRGITRD-LSWGVPVK 244 Query: 221 ------PDDPQYIMYVWIDALTNYLTTTGYLDNPDG-SKA---KFWPADL--------HV 262 P + YVW DA Y+ + +G S A ++W D+ Sbjct: 245 RGTEDWPGMEGKVFYVWFDAPIEYIACAKEWADANGLSDADWQRWWRTDMGAEDVRYTQF 304 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHG--FILHKGEKISKSLGNVIDPIEVIEEV 320 +GKD + FH + +P +L + P + G ++ + G + S S G + + + + Sbjct: 305 MGKDNIPFHTLSFPVTILGSGEPWKLVDYIKGLNYLNYDGGQFSTSRGRGVFMDQALAIL 364 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D R++L+ + D + + + VN DLA+ +GN VSR + ++P Sbjct: 365 PSDYWRWWLLSHVPESSDSEFTWENFQASVNKDLADVLGNFVSRVTKFCRSKFGEVVPEG 424 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 G + +E++++ + ++ +M + ++ +++ ++ + Y A PW K + Sbjct: 425 GTWGAQEEALIAELTTRVRAYEGHMDAMEVRKSASELRAIWVAGNEYLQAAAPWVTFKED 484 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 P++A+ + + + +IR A+L F+P A + + D Sbjct: 485 PEQAAAQIRLALNLIRLYAVLSAPFIPDAAEDLMKAMHTDD 525 >gi|318059205|ref|ZP_07977928.1| methionyl-tRNA synthetase [Streptomyces sp. SA3_actG] gi|318081093|ref|ZP_07988425.1| methionyl-tRNA synthetase [Streptomyces sp. SA3_actF] Length = 570 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 132/513 (25%), Positives = 224/513 (43%), Gaps = 54/513 (10%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N H+G+ M+ ADV AR+ R G +VL+ TDEHG AA GV Sbjct: 6 ITSALPYINGIKHLGNMVGSMLPADVYARYLRQRGHEVLYICATDEHGTPAELAAAAQGV 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 F + + D +++D F R++ ++ + + +K+++ G I + Sbjct: 66 PVAEFCATAHDAQKAVYDGFSLAFDYFGRSSSAQNREITQHFARKLNENGFIEERAIRQV 125 Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP---------VQWME 161 YS D + D V Y A G Q N NP ++ E Sbjct: 126 YSPVDGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLINPRSAISGSTELEVRE 185 Query: 162 EEGYFFRLSAYQDKLLSYYE----SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + F S Q ++ + + S P+ I R+ ++ GL D +++R DWG Sbjct: 186 TKHLFLLQSKLQGEVEKWIDATADSWPQLSSSIARK-----WLTEGLHDRAITRD-LDWG 239 Query: 218 IKIPDD--PQY-----IMYVWIDALTNYLTTTGYLDN--PDGSKAKFW--PAD----LHV 262 + +P D P+ + YVW DA Y+ T P+G K W AD Sbjct: 240 VPVPADVWPELAAEGKVFYVWFDAPIEYIGATREWAETAPEGRDWKSWWYEADDVRYTEF 299 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVF--SHGFILHKGEKISKSLGNVIDPIEVIEEV 320 +GKD + FH++ +PA + P + F S ++ + G K S S + + +E + Sbjct: 300 MGKDNVPFHSVMFPATQIGTREPWKRVDFLKSFNWLNYYGGKFSTSQRRGVFTHDALELL 359 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D RYF++ D + + + VN DLA+ +GN V+R +S K + +P Sbjct: 360 PADYWRYFMMANAPESDDTSFTWEHFQATVNKDLADTLGNFVNRVLSFSRKRFGDAVPEG 419 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 G E++ + +R+L E E M+ +A A + +L S + Y + + PW KT+ Sbjct: 420 GTAGEAETRLGEEIARLLAEYEEQMEALQFRKAAAALRALWSAGNSYLEEKAPWLEIKTD 479 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + A+ L + +I A++ + FVP A + Sbjct: 480 QEAAALTLRTAMNLIHLYAVVSEPFVPTTAKAM 512 >gi|302520598|ref|ZP_07272940.1| methionyl-tRNA synthetase [Streptomyces sp. SPB78] gi|302429493|gb|EFL01309.1| methionyl-tRNA synthetase [Streptomyces sp. SPB78] Length = 570 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 132/513 (25%), Positives = 224/513 (43%), Gaps = 54/513 (10%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N H+G+ M+ ADV AR+ R G +VL+ TDEHG AA GV Sbjct: 6 ITSALPYINGIKHLGNMVGSMLPADVYARYLRQRGHEVLYICATDEHGTPAELAAAAQGV 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 F + + D +++D F R++ ++ + + +K+++ G I + Sbjct: 66 PVAEFCATAHDAQKAVYDGFSLAFDYFGRSSSAQNREITQHFARKLNENGFIEERAIRQV 125 Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP---------VQWME 161 YS D + D V Y A G Q N NP ++ E Sbjct: 126 YSPVDGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLINPRSAISGSTELEVRE 185 Query: 162 EEGYFFRLSAYQDKLLSYYE----SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + F S Q ++ + + S P+ I R+ ++ GL D +++R DWG Sbjct: 186 TKHLFLLQSKLQGEVEKWIDATADSWPQLSSSIARK-----WLTEGLHDRAITRD-LDWG 239 Query: 218 IKIPDD--PQY-----IMYVWIDALTNYLTTTGYLDN--PDGSKAKFW--PAD----LHV 262 + +P D P+ + YVW DA Y+ T P+G K W AD Sbjct: 240 VPVPADVWPELAAEGKVFYVWFDAPIEYIGATREWAETAPEGRDWKSWWYEADDVRYTEF 299 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVF--SHGFILHKGEKISKSLGNVIDPIEVIEEV 320 +GKD + FH++ +PA + P + F S ++ + G K S S + + +E + Sbjct: 300 MGKDNVPFHSVMFPATQIGTREPWKRVDFLKSFNWLNYYGGKFSTSQRRGVFTHDALELL 359 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D RYF++ D + + + VN DLA+ +GN V+R +S K + +P Sbjct: 360 PADYWRYFMMANAPESDDTSFTWEHFQATVNKDLADTLGNFVNRVLSFSRKRFGDAVPEG 419 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 G E++ + +R+L E E M+ +A A + +L S + Y + + PW KT+ Sbjct: 420 GTAGEAETRLGEEIARLLAEYEEQMEALQFRKAAAALRALWSAGNSYLEEKAPWLEIKTD 479 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + A+ L + +I A++ + FVP A + Sbjct: 480 QEAAALTLRTAMNLIHLYAVVSEPFVPTTAKAM 512 >gi|198434929|ref|XP_002128793.1| PREDICTED: similar to methionyl-tRNA synthetase [Ciona intestinalis] Length = 883 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 134/552 (24%), Positives = 244/552 (44%), Gaps = 51/552 (9%) Query: 2 KEREK-LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 KE EK + I++A+ Y N PH+G+ ++ ADV +R+ RL G +VL+ GTDE+G Sbjct: 250 KEGEKNILITSALPYVNNVPHLGNIIGCVLSADVFSRYCRLRGWNVLYICGTDEYGTATE 309 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A GVT K D+ + ++ + I +D F RTT + + ++ + + Sbjct: 310 TKAAQEGVTPKEICDKYHKIHSEVYEWFSIGFDYFGRTTTECQTKIAQDIFWHLHRNNHL 369 Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------- 161 K Y R E + D V ++ A G + + +E Sbjct: 370 IKQTVEQLYCGRCERFLADRFVEGTCPLCAFEDARGDQCDKCGKLINAVELKSPKCKMCS 429 Query: 162 -------EEGYFFRLSAYQDKLL-SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 E F LS + KL ES + ++++ GLK ++R Sbjct: 430 DTPAIRTSEHLFVDLSKLEPKLRRCLQESFKGEGWSNNAKTITETWLRDGLKPRCITRD- 488 Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW---PADLHV---IG 264 WG +P + + YVW DA YL+ T Y D K + W P ++ + + Sbjct: 489 LKWGTPVPLEGFTDKVFYVWFDAPIGYLSITANYTD-----KWELWWKNPKNVQLYNFMA 543 Query: 265 KDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321 KD + FH++ +P+ LL + + + + ++ ++ K SKS G V + Sbjct: 544 KDNVPFHSVVFPSCLLGTDDEYTIVNHLNATEYLNYEEGKFSKSRGVGVFGDHASKTNID 603 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D R++L+ G+D + + N++L N +GN ++RS+ + Y G++P P Sbjct: 604 SDIWRFYLLSMRPEGQDTHFSWSDFLLKNNSELLNNLGNFINRSLKFVSNAYGGVVPDP- 662 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 +D +L++ +R L++ +M I L +++S+ ++Y +PW+L K + Sbjct: 663 VLNNTDLELLALVNRELKDYVTDMDKLKIRDNLRRILSISRLGNQYLQENQPWKLIKGSN 722 Query: 442 D---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498 D RASTV + + L IL+ ++P+ ++ I D L + ++ + L G Sbjct: 723 DDKSRASTVTSIAANLSCLLCILIHPYMPQTSSIIQDQLNLRGGYLIPDAITRMLPSGHK 782 Query: 499 LHKTFDPIFPRF 510 ++K P+F + Sbjct: 783 INKP-SPLFRKL 793 >gi|196013568|ref|XP_002116645.1| hypothetical protein TRIADDRAFT_31114 [Trichoplax adhaerens] gi|190580921|gb|EDV21001.1| hypothetical protein TRIADDRAFT_31114 [Trichoplax adhaerens] Length = 761 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 129/549 (23%), Positives = 243/549 (44%), Gaps = 59/549 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + +++A+ Y N PH+G+ ++ AD AR+ R ++L+ GTDE+G A Sbjct: 125 KRNILLTSALPYVNNVPHLGNIVGCVLSADAFARYCRARNYNILYICGTDEYGTATETKA 184 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GVT + D+ ++ DIS+D F RTT K + + ++ ++ D+ + + Sbjct: 185 VEEGVTPQQICDKYHALHAEVYKWFDISFDHFGRTTTKEQTEIAQDIFWRLQDRNYVTEE 244 Query: 123 CYSGWYSLRDEAYYNDDEVYKGAD---------------GQYYNA-----------QHNP 156 + + + D V G+ NA + P Sbjct: 245 NVDQLFCENCQRFLADRFVEGTCPFCTFPDARGDQCDKCGKLINAIELKAPRCKVCKSQP 304 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL--PIERRNEVISFVKSGLKDLSLSRKTF 214 V + F L + +L YY P+ + RN ++++ G+K ++R Sbjct: 305 VI-KSSKHLFLDLPKIEPQLHKYY-GRPDSLTDWSPAARNITQTWLRDGVKSRCITRD-L 361 Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKD 266 WG +P + + + YVW DA Y++ T Y D + K+W P ++ + + KD Sbjct: 362 KWGTPVPLEGFTEKVFYVWYDAPIGYISITAAYTDQWE----KWWKNPQNVEMYNFMAKD 417 Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVD 323 + FH+I +PA LL+A N + K+ + ++ ++ K SKS G V + VD Sbjct: 418 NVPFHSIIFPACLLAADDNYTVVNKLSATEYLNYEDGKFSKSRGIGVFGNDAKATGIPVD 477 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 R++L+ +D + L+ + N++L +GN V+R++ + ++G IP Sbjct: 478 IWRFYLLYVRPETQDSSFSWSDLEAKNNSELLANLGNFVNRAMLFVSNFFNGEIPEMD-L 536 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TN 440 E D+ +L+ +R ++ N++ I + ++S+ ++Y + PW+L K + Sbjct: 537 IEEDKVLLAQITREIRTYNNNLERTRIRDGIRNILSVSRLGNQYMQSHTPWKLVKQSEAD 596 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF-------DILFVADENRCFQSLDQRL 493 RA TV+ V + L+ILLQ ++P + +I D + D+ C R+ Sbjct: 597 KKRAGTVVGVCANITCLLSILLQPYMPTTSKEILSQAKLVDDYSVITDKFVCLLPAGHRI 656 Query: 494 -KPGFMLHK 501 KP + K Sbjct: 657 GKPKHLFEK 665 >gi|30248639|ref|NP_840709.1| methionyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718] gi|68566001|sp|Q82WP0|SYM_NITEU RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|30180234|emb|CAD84536.1| Methionyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718] Length = 706 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 133/547 (24%), Positives = 229/547 (41%), Gaps = 61/547 (11%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + +++A+ Y N H+GH E I D+ RF ++ G V + D HG + A+ G Sbjct: 6 ILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGHTVYYVCADDTHGTPVMLRAEKEG 65 Query: 67 VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI----LWKKISDKGDIYK 121 ++ + + + ++ + RD I++D + T H D R +++K+ + G I Sbjct: 66 ISPEALIARVHAEHLRDFTG-FHIAFDQYYST----HSDETRYYAEDIYRKLKEAGLIAV 120 Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------- 161 Y + D V GA QY A + P + Sbjct: 121 RAIEQLYDPIKNLFLPDRFVKGECPKCGAAEQYGDSCEACGAAYTPTELKNPYSAVSGAT 180 Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRK 212 E +FF+LS + +H L E N++ ++ ++ L D +SR Sbjct: 181 PVRKTSEHFFFKLSDSRCADFLRRWTHEGNHLQAEAANKMAEWLGEAGENKLSDWDISRD 240 Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKD 266 +G +IP + YVW+DA Y+ + L G +W D H IGKD Sbjct: 241 APYFGFEIPGETGKYFYVWLDAPIGYMGSFKKLCARKGIDFDAYWKKDSTTELYHFIGKD 300 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325 IL FHA++WPA L +A P ++F+HGF+ GEK+SKS G I +E+ + + L Sbjct: 301 ILYFHALFWPAMLENAGYRTPTQIFAHGFLTVNGEKMSKSRGTFITAESYLEQGLNPEWL 360 Query: 326 RYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF- 383 RY+ ++ +D + D RVN+DL N+ SR I K + G + + + Sbjct: 361 RYYYAAKLNGSMEDIDLNLDDFVARVNSDLVGKYINIASRCAGFISKRFGGKLVSGEDYR 420 Query: 384 ---TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK-- 438 DE V++ E A+ ++ EV+ PWE+ + Sbjct: 421 LLQQMVDEHFAGWQPGVIEAAYEARD---FSAAVRHIMRRADEVNELIHELAPWEIARDE 477 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD----ENRCFQSL-DQRL 493 T + +++ L+ L+ +P+ A +I D L + + + + Q L D L Sbjct: 478 TRERELHRACSLGIQMFYLLSCYLKPILPRTAAQIEDFLNLGELSWQKQQAGQPLSDTLL 537 Query: 494 KPGFMLH 500 PG +++ Sbjct: 538 PPGHVIN 544 >gi|328717976|ref|XP_003246352.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon pisum] Length = 736 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 126/524 (24%), Positives = 239/524 (45%), Gaps = 67/524 (12%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 +K+ + + +++A+ Y N PH+G+ ++ ADV AR+ RL G + L+ +GTDE+G Sbjct: 40 VKDEKNILVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGWNTLYISGTDEYGTATE 99 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A +T + D+ + ++ +IS+D F RTT ++ + + ++K++ G Sbjct: 100 TKALEEKLTPQQICDKFFKIHNEIYKWFNISFDHFGRTTSQKQTEIVQEIFKEVHSNG-- 157 Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------------YKGADGQYYN-------------- 151 Y+ S+ N D Y+ A G + Sbjct: 158 ----YTSTASMEQLLCENCDRFLADRFVEGTCPLCNYEDARGDQCDGCGHLINATELIKP 213 Query: 152 ----AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI--SFVKSGLK 205 Q PV ++ F L + KL + + + +VI S++K GLK Sbjct: 214 RCKVCQKTPVIRSSQQ-LFLNLPKVEAKLNDWVDKSGD---DWSYNAKVITKSWLKDGLK 269 Query: 206 DLSLSRKTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD--- 259 + ++R WGI +P D + YVW DA Y++ + PD K +W P D Sbjct: 270 ERCITRD-LKWGIPVPLEDFKSKVFYVWFDAPIGYMSMSAAY-TPDWRK--WWQPEDDTK 325 Query: 260 ---LHVIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 + KD + FH++ +PA L + N + + + ++ ++ K SKS G + Sbjct: 326 VTYYQFMAKDNVPFHSVMFPACLFATERNYTMVNHIMATEYLNYEDGKFSKSRGVGVFGN 385 Query: 315 EVIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 + ++ G+ D R++L+ +D + L + N++L N +GN +R++S + K Sbjct: 386 DA-QDTGLPADVFRFYLLFVRPESQDSSFSWADLATKNNSELLNNLGNFCNRALSFLEKF 444 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 +D +IP + ++L++ +R L+E + + L ++S+ ++Y QK Sbjct: 445 FDCVIPEI-QLGNDELTLLALVTRDLKEYTSMLDKAKLRDGLRLILSISRHGNQYMQFQK 503 Query: 433 PWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 PW L K + + RA TV+ ++ + LA++LQ ++P+ N I Sbjct: 504 PWVLIKGSSEEKIRAGTVIGLSCNLACLLAVMLQPYMPQTVNII 547 >gi|163747185|ref|ZP_02154540.1| methionyl-tRNA synthetase [Oceanibulbus indolifex HEL-45] gi|161379460|gb|EDQ03874.1| methionyl-tRNA synthetase [Oceanibulbus indolifex HEL-45] Length = 570 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 118/519 (22%), Positives = 222/519 (42%), Gaps = 47/519 (9%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R G +VLF TDEHG AA AG Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLYARYLRGRGQEVLFLCATDEHGTPAELAAAKAGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + + +A+ +S++ F R++ ++ + ++D+G I + Sbjct: 66 PVEDYCAEMYAVQARIAEGFGLSFNHFGRSSSVQNRKLTQHFAGALADQGLIEEVSQRQI 125 Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNP---------------VQWME 161 YS D + D E +G Q +P ++ E Sbjct: 126 YSPTDGRFLPDRYVEGTCPNCGFEDARGDQCDNCTKQLDPEDLINPRSTISGATDLEMRE 185 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI- 220 + F R S +D+L + S ++ + + GL+D ++R WG+ + Sbjct: 186 TKHLFLRQSKLKDELDDWINSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD-LSWGVPVK 244 Query: 221 ------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFW-----PAD----LHVIG 264 P + YVW DA Y+ ++D GS + W AD +G Sbjct: 245 RGDQDWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGSDWESWWRTDKGADDVRYTQFMG 304 Query: 265 KDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 KD + FH + +PA + + P L + S ++ + G + S S G + + +E + Sbjct: 305 KDNVPFHTLSFPATIKGSGEPWKLVDYIKSFNYLTYDGGQFSTSRGRGVFMDQALEILPA 364 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R++L+ D + + + VN DLA+ +GN +SR + +P G Sbjct: 365 DYWRWWLLSHAPETSDAEFTWENFQASVNKDLADVLGNFISRITKFCRSKFGEAVPEAGE 424 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 + E++++++ + + M+ + ++ A++ + + + Y AQ PW KT+PD Sbjct: 425 YGEAEQALIEDITARVARYETLMEAMEVRKSAAELRGIWAAGNEYLQAQAPWTTFKTDPD 484 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 +A+ + + + +I A+L F+P A + + + VAD Sbjct: 485 KAAAQVRLALNLIPLYAVLSAPFIPSAAASMLEAMKVAD 523 >gi|329851532|ref|ZP_08266289.1| methionyl-tRNA synthetase [Asticcacaulis biprosthecum C19] gi|328840378|gb|EGF89950.1| methionyl-tRNA synthetase [Asticcacaulis biprosthecum C19] Length = 571 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 123/516 (23%), Positives = 219/516 (42%), Gaps = 52/516 (10%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++A+ Y N H+G+ A M+ ADV ARF R G +VL+ TDEHG AA Sbjct: 3 RILITSALPYINGIKHLGNLAGSMLPADVYARFMRARGHEVLYICATDEHGTPAELAAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + + D+ + + +SYD F R++ ++ ++ + + G I + Sbjct: 63 AGQDVRTYCDEQHLIQKSAGESFGLSYDWFGRSSSPQNRQLTQMFCEALDRNGLIEERVD 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP---------VQ 158 +S+ D + D V Y+ A G Q N NP ++ Sbjct: 123 KMVFSIDDGRFLPDRYVEGTCPHCGYEKARGDQCDNCGRLLDPTDLKNPYSAVSGSTNLE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + + + +D+L ++ SH + P ++ + GL D ++R WG+ Sbjct: 183 VRDTRHLYLLQTKVEDRLRAWIASHDNW--PHLAKSIANKHLDEGLIDRGITRD-LAWGV 239 Query: 219 KIPDDPQ-------YIMYVWIDALTNYLTTT-GYLD---NPDGSKAKFWPAD-------- 259 + D Q + YVW DA Y+ T + D PDG + +W D Sbjct: 240 PVTKDGQPRPGFENKVFYVWFDAPIEYIAATREFFDAKGKPDGWQT-WWRLDQGAEDVSY 298 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 + +GKD + FH + +PA +L + P + + + ++ G K S S+ + + + Sbjct: 299 VEFMGKDNVAFHTVSFPATILGSGEPWKMVDTLKAFNWLNWYGGKFSTSMNRGVFMDQAL 358 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E + D R++L+ D + + + +N DL + +GN V+R G + Sbjct: 359 ELLPADYWRWYLIANSPESSDSSFTWEQFQATINKDLNDVLGNFVNRITKFTEGKLGGGV 418 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G +E + + L E E ++ + +A V + + Y PW Sbjct: 419 PEGGEAGPIEEKLYGDVAEQLAEATEALETMEMRKAAQAVRRIWVLGNEYLQEAAPWTAI 478 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 KT+P RA ++ + ++R A+L Q F+P A KI Sbjct: 479 KTDPARAGVIVRHALNLVRLNAVLAQPFMPFSAEKI 514 >gi|82703057|ref|YP_412623.1| methionyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196] gi|123727136|sp|Q2Y7P0|SYM_NITMU RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|82411122|gb|ABB75231.1| methionyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196] Length = 728 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 126/532 (23%), Positives = 216/532 (40%), Gaps = 70/532 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K+ +++A+ Y N H+GH E I D+ RF ++ +V + D HG I A+ Sbjct: 3 KRKILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQEHEVHYVCADDAHGTPIMLRAE 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + +D+ + D I +D + T + C +++++ I K Sbjct: 63 QEGITPRQLIDRVWHEHKTDFDGFHIGFDHYYTTDSPENQAFCEDIYRQLRAGELIAKRS 122 Query: 124 YSGWYSLRDEAYYND----DEVYKGADGQYYN-------AQHNPVQWME----------- 161 +Y + + D E + G Y A + P + Sbjct: 123 VEQFYDPVKQMFLPDRYIKGECPRCHAGDQYGDSCEACGATYLPTDLISPYSAVSGARPE 182 Query: 162 ---EEGYFFRLSA------YQDKLLSYYESHPEFILPIERR------NEVISFVKSGLKD 206 YFF+LS ++ + + P L R N++ ++ +GL D Sbjct: 183 RRTSNHYFFKLSDVRCEAFLKNWIFESIPAQPGVALETRPRLQPEAANKMNEWLSAGLVD 242 Query: 207 LSLSRKTFDWGIKIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAK----FWPAD- 259 +SR +G IP + YVW+DA Y + Y ++A+ P Sbjct: 243 WDISRDAPYFGFPIPRTGGKKFFYVWLDAPVGYFGSFKNYFKQNQRTQAEIDEFLRPGGN 302 Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316 +H IGKDIL FHA++WPA L + P ++++HGF+ G+K+SKS G I Sbjct: 303 TEMVHFIGKDILYFHALFWPAMLEFSGYRTPTQIYAHGFLTVNGQKMSKSRGTFITAESY 362 Query: 317 IEE-VGVDALRYFLVREIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRSVSMILK 371 +++ + + LRY+ ++ D D D RVN+DL N+ SR I K Sbjct: 363 LKQGLNPEWLRYYYAAKL---NDSMEDIDLSFEDFVARVNSDLVGKYVNIASRCAGFITK 419 Query: 372 DYDGMIPTPGA-----------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 + G + + F E E + + I + + +A+ +++S Sbjct: 420 KFGGELTHNVSEASRKWFNQFLFCELGEGDTFLGRHM--SIANFYERREYSKAIKEIMSA 477 Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 ++Y D KPW L K N V V + + R L + L+ +PKLA Sbjct: 478 ADVANQYVDRMKPWVLAKDSRNDRELHEVCSVALNMFRMLTVYLKPVLPKLA 529 >gi|307329475|ref|ZP_07608636.1| methionyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] gi|306884884|gb|EFN15909.1| methionyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] Length = 577 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 130/509 (25%), Positives = 220/509 (43%), Gaps = 45/509 (8%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N H+G+ M+ ADV +R+ R G DVL+ TDEHG AA+ AG+ Sbjct: 6 ITSALPYINGIKHLGNMVGSMLPADVYSRYMRQRGHDVLYICATDEHGTPAELAAKEAGL 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 F Q + + D +++D F R++ ++ + + +++ G I + Sbjct: 66 PVDEFCAQQHEAQKAIYDGFGLAFDYFGRSSSAQNVQITQTIARELKANGFIEERSIRQV 125 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL-LSYYE 181 YS D + D + + G D + N + ++ SA L E Sbjct: 126 YSNADGRFLPDRYIEGTCPHCGYDKARGDQCENCTRVLDPTDLIDARSAISGSSDLEVRE 185 Query: 182 SHPEFILPIERRNEVISFV-------------------KSGLKDLSLSRKTFDWGIKIPD 222 + F+L + EV S+V GL+D +++R DWG+ +P Sbjct: 186 TKHLFLLQSKLAEEVASWVDERGKDWPTLASSIARKWLNEGLQDRAITRD-LDWGVPVPA 244 Query: 223 D--PQY-----IMYVWIDALTNYLTTTG-YLD-NPDGSKAKFWPADL-------HVIGKD 266 D P+ + YVW DA Y+ T + D +P+ K W D+ + KD Sbjct: 245 DTWPELAAEGKVFYVWFDAPIEYIGATKEWADLDPENRDWKSWWYDVDETVRYTEFMAKD 304 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEEVGVDA 324 + FH + +PA LL K + F + + G K S S + +E + D Sbjct: 305 NVPFHTVMFPATLLGTRDAWKKVDYVKAFNWLTYYGGKFSTSQKRGVFTDAALEVLPADY 364 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 RYFL+ D + + VN DLA+ +GN V+R +S K + +P A Sbjct: 365 WRYFLMANAPESDDTSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFGDEVPAGQAAG 424 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 E++E + +R+L E E+M +A A + +L S + Y + + PW KT+ + A Sbjct: 425 EAEERLGEEIARLLAEYEEHMDALQFRKAAAALRALWSAGNSYLEEKAPWLEIKTDQEAA 484 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKI 473 + L + +I AI+ + F+P A + Sbjct: 485 ALTLRTAMNLIHLYAIVSEPFIPSSARAM 513 >gi|163743016|ref|ZP_02150399.1| methionyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] gi|161383699|gb|EDQ08085.1| methionyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] Length = 575 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 113/531 (21%), Positives = 224/531 (42%), Gaps = 49/531 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M + + I++AI Y N H+G+ + AD+ AR+ R G +V+F TDEHG Sbjct: 1 MDDMARFLITSAIPYINGIKHLGNLVGSQLPADLYARYQRARGHEVMFLCATDEHGTPAE 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AA AG + + +A +S+D F R++ ++H + K++++G I Sbjct: 61 LAAAKAGKPVADYCAEMHEVQAGIAKGFGLSFDHFGRSSSPQNHALTQHFAGKLAEQGLI 120 Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160 + +S D + D E +G + Q +P + Sbjct: 121 REVTEKQVFSHADGRFLPDRYIEGTCPNCGYERARGDQCEECTKQLDPTDLIDPRSAISG 180 Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 E + + S +D+L + S ++ + + GL+D ++R Sbjct: 181 STDLEVRETKHLYLCQSQLKDQLDDWINSKSDWPVLTTSIAKKWLHDGDGLQDRGITRD- 239 Query: 214 FDWGIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD--- 259 DWG+ + P + YVW DA Y+ + + +G ++W D Sbjct: 240 LDWGVPVKKGDADWPGMEGKVFYVWFDAPIEYIAASREWADANGKTDADWQRWWRTDKGA 299 Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVID 312 + +GKD + FH + +PA +L + P + + S ++ + G + S S G + Sbjct: 300 EDVKYVQFMGKDNVPFHTLSFPATILGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVF 359 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 + +E + D R++L+ D + + ++ VN DLA+ +GN VSR Sbjct: 360 MDQALEILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSK 419 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 Y +P + E++++++ S + +M + ++ ++ ++ + Y + Sbjct: 420 YGEAVPAGNDYGEAEQALIDEISTRVTAYEGHMAAMDVRKSAQELRAIWVAGNEYLQSVA 479 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 PW + KT+PD+A+ + + + +IR A+L F+P ++ L D + Sbjct: 480 PWSVFKTDPDQAAAQVRLGLNLIRLYAVLSAPFIPDATERLLAALQTEDRS 530 >gi|254449433|ref|ZP_05062870.1| methionyl-tRNA synthetase [Octadecabacter antarcticus 238] gi|198263839|gb|EDY88109.1| methionyl-tRNA synthetase [Octadecabacter antarcticus 238] Length = 570 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 116/520 (22%), Positives = 221/520 (42%), Gaps = 57/520 (10%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R G +VLF TDEHG AA A Sbjct: 6 ITSAIPYINGIKHLGNLIGSQLPADLYARYLRGRGHEVLFLCATDEHGTPAELAATKADK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + D+A +S+D + R++ ++ + ++DKG I + + Sbjct: 66 PVAEYCAEMWTVQSDLAARFGLSFDHYGRSSSPQNRALTQHFAGVLADKGLIEERMETQM 125 Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 YS D Y D E +G Q +PV + + +S D Sbjct: 126 YSHEDGRYLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPVDLINP---YSTISGSTD-- 180 Query: 177 LSYYESHPEFILPIERRNEVISFVKS--------------------GLKDLSLSRKTFDW 216 L ++ ++L + +N++ +++ S GL+D ++R DW Sbjct: 181 LEMRDTKHLYLLQSKLKNDIEAWIDSQTGWPVLTTSIAKKWLHDGDGLQDRGITRD-LDW 239 Query: 217 GIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-------- 259 G+ + P + YVW DA Y+ + G + A++W D Sbjct: 240 GVPVMRGDAPWPGMEDKVFYVWFDAPIEYIACAQEWADATGGQDWARWWRTDKGADDVRY 299 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF--SHGFILHKGEKISKSLGNVIDPIEVI 317 +GKD + FH + +PA ++ ++ P + + S F+ + G + S S G + + + Sbjct: 300 TQFMGKDNVPFHTLSFPATIIGSDEPWKRVDYLKSFNFLNYDGGQFSTSRGRGVFMDQAL 359 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E + D R++L+ D + + + N DLA+ +GN VSR + + Sbjct: 360 EILPADYWRWWLLSHAPETSDAEFTWEAFQTDTNKDLADVLGNFVSRVTKFCRSKFSEDV 419 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G + +++ +++ L + M + +A A+V ++ + + Y A PW + Sbjct: 420 PAGGEYGDAENKLIADLQIRLTAYQAAMDAIEVRKAAAEVRAMWAAGNEYLQAAAPWSVF 479 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K +PD+A+ + + + +IR A+L F+P + + + Sbjct: 480 KVDPDQAAAQIRLALNLIRIYAVLSAPFIPTASATLLSAM 519 >gi|85705165|ref|ZP_01036265.1| methionyl-tRNA synthetase [Roseovarius sp. 217] gi|85670487|gb|EAQ25348.1| methionyl-tRNA synthetase [Roseovarius sp. 217] Length = 570 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 117/507 (23%), Positives = 219/507 (43%), Gaps = 51/507 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R G +VLF TDEHG AA AG Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLFARYCRARGHEVLFLCATDEHGTPAELAAAKAGQ 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + ++A +S+D F R++ ++H + K++ D+G I + + Sbjct: 66 PVAEYCAEMHTVQAEIARGFRLSFDHFGRSSSSQNHRLTQHFAKRLHDQGLIREVSETQM 125 Query: 128 YSLRDEAYYNDDEV--------YKGADGQYYN---AQHNPVQWMEEEG------------ 164 YS D Y D + Y A G + Q +PV + Sbjct: 126 YSPTDGRYLPDRYIEGTCPNCGYDSARGDQCDNCTKQLDPVDLINPRSVISGATDLEMRV 185 Query: 165 ---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--LKDLSLSRKTFDWGIK 219 + S +D+L + +S + P+ + ++ G L+D ++R DWGI Sbjct: 186 TKHLYLCQSQMKDELEKWIDSKTGW--PVLTTSIAKKWLNDGDGLQDRGITRD-LDWGIP 242 Query: 220 I-------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD--------LHV 262 + P + YVW DA Y+ ++D G+ ++W D Sbjct: 243 VKRGDEDWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGTDWERWWRTDKGAEDVRYTQF 302 Query: 263 IGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 +GKD + FH + +PA +L + P L + S ++ + G + S S G + + +E + Sbjct: 303 MGKDNVPFHTLSFPATILGSREPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALEIL 362 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D R++L+ D + + + VN DLA+ +GN VSR + +P+ Sbjct: 363 PADYWRWWLLSHAPESSDSEFTWENFQASVNKDLADVLGNFVSRVTKFCRSKFGETVPSG 422 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 + + ++++ + +++ +M+ + ++ A + ++ E + Y PW K + Sbjct: 423 ATYGAQETALIARLTSRIRDYEGHMEAMEVRKSAAALRAIWVEGNEYLQEVAPWSTFKQD 482 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVP 467 P+RA+ + + +IR A+L F+P Sbjct: 483 PERAAMQTRLALNLIRLYAVLSSPFIP 509 >gi|302775650|ref|XP_002971242.1| hypothetical protein SELMODRAFT_171855 [Selaginella moellendorffii] gi|300161224|gb|EFJ27840.1| hypothetical protein SELMODRAFT_171855 [Selaginella moellendorffii] Length = 784 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 126/521 (24%), Positives = 225/521 (43%), Gaps = 62/521 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + +++A+ Y N PH+G+ ++ ADV AR+ RL G ++++ GTDE+G A Sbjct: 9 RRNILVTSALPYVNNVPHLGNIIGSVLSADVFARYGRLRGYNIIYMCGTDEYGTATETKA 68 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + K D+ + + D DI +D F RT+ C+ ++KK+ + +Y+ Sbjct: 69 LEEKTSPKEICDKYHDVHKKVYDWFDIRFDKFGRTSSPEQTVICQSIFKKLLAQDRLYED 128 Query: 123 ---------CYSGWYSLRDEAYYND----DEVYKGADGQYYNAQHNPVQWMEEEG----- 164 C S L D +G + NP + +E + Sbjct: 129 KINQACRLYCESCQRFLADRFVIGTCPKCGMTARGDQCEKCTHVLNPGELVEPKCKICNS 188 Query: 165 ---------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRK 212 F L +++L+ Y E I N + ++++ GLK ++R Sbjct: 189 SPHLRETTHLFLDLPKIKNELVDYVEKTS--IAGGWSSNSITITNAWIRDGLKGRCITRD 246 Query: 213 TFDWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGK 265 WG+ +P P++ + YVW DA Y++ T N K+W ++ +GK Sbjct: 247 -LKWGVPVPL-PRFEDKVFYVWFDAPIGYISITA---NYTPEWEKWWKSEDVELFQFMGK 301 Query: 266 DILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322 D + FH + +P LL + K + + ++ ++G K SKS G V V V Sbjct: 302 DNVTFHTVIFPCTLLGTGERWTMMKTLSATEYLNYEGAKFSKSAGIGVFGNDAQDTNVPV 361 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP 378 + RY+L+ D F+ L+ + N +L +GN V R +S + K Y IP Sbjct: 362 EVWRYYLLSIRPEAADTFFSWADLQAKQNNELLKNLGNFVHRCLSFLAKPEGQGYSSKIP 421 Query: 379 -TPGAFTESDESILSV-----CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 PGA +E L+V S +LQ+ ++M+ + L +S+ S + Y + Sbjct: 422 DAPGA----EEHALTVKLAEEVSELLQQYVDSMEKTKLKNGLKVAMSISSLGNSYLQESE 477 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 W L K + + V+ + +++ LA +L+ F+P + K+ Sbjct: 478 FWRLYKEDRPSCNIVVRTAIGLVKILATILEPFMPSFSKKV 518 >gi|331247157|ref|XP_003336208.1| methionyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309315198|gb|EFP91789.1| methionyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 291 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 91/306 (29%), Positives = 146/306 (47%), Gaps = 55/306 (17%) Query: 204 LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 L DLS+SR T WGI +P DP I+ Sbjct: 9 LADLSISRPTSRLSWGIPVPGDPNQII--------------------------------- 35 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321 FHAIYWPA L++A +PLPK + +HG EK+SKS+GNV+DP + ++E G Sbjct: 36 --------FHAIYWPAILMAAGIPLPKHIIAHGHWKIDEEKMSKSIGNVVDPFKAMDEWG 87 Query: 322 VDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--------KD 372 VD +RY+L+R D + + L + DL +GNL++R + L + Sbjct: 88 VDGVRYYLMRAPGSLWGDSDWAPNRLDEHYRKDLLGQLGNLLARISAPKLWNRLPPGRRS 147 Query: 373 YDGMIPTPGAFTESD--ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 ++ PG+ TE + +S+ + ++ E+ +M++ I +AL + +++ +R Sbjct: 148 GASILFPPGSKTEIEGADSLQRLLLQLPGELDGHMKSFEIPKALKSIFDVLAGANRLIQD 207 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490 PW + T PD A ++++ E +R ILLQ F+P A ++ D L VA + R + L Sbjct: 208 TAPWH-ESTTPDDAYQAIHLSAEALRISGILLQPFIPAKAAQLLDSLGVAQDGRTWSHLA 266 Query: 491 QRLKPG 496 L G Sbjct: 267 LGLGTG 272 >gi|302543872|ref|ZP_07296214.1| methionine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653] gi|302461490|gb|EFL24583.1| methionine-tRNA ligase [Streptomyces himastatinicus ATCC 53653] Length = 584 Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 129/503 (25%), Positives = 221/503 (43%), Gaps = 45/503 (8%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N H+G+ M+ ADV +R+ R G DVL+ TDEHG AA+ AG+ Sbjct: 6 ITSALPYINGIKHLGNMVGSMLPADVYSRYMRQRGHDVLYICATDEHGTPAELAAKEAGL 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 VF Q + + D +++D F R++ ++ + + + +++ G I + Sbjct: 66 PVDVFCAQQHDAQKAIYDGFGLAFDYFGRSSSAQNVEITQRIARELKGHGFIEERSIRQV 125 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL-LSYYE 181 YS D + D + + G D + N + ++ SA L E Sbjct: 126 YSNADGRFLPDRYIEGTCPHCGYDRARGDQCENCTRVLDPTDLIDARSAISGSSDLEIRE 185 Query: 182 SHPEFILPIERRNEVISFVK-------------------SGLKDLSLSRKTFDWGIKIPD 222 + F+L + EV ++V+ GL+D +++R DWG+ +P Sbjct: 186 TKHLFLLQSKLAEEVGTWVEENGKQWPTLASSIARKWLTEGLQDRAITRD-LDWGVPVPA 244 Query: 223 D--PQY-----IMYVWIDALTNYLTTTG-YLD-NPDGSKAKFWPADL-------HVIGKD 266 D P+ + YVW DA Y+ T + D +P+ K W D+ + KD Sbjct: 245 DTWPELAAEGKVFYVWFDAPIEYIGATKEWADRDPENRDWKSWWYDVDTTVRYTEFMAKD 304 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEEVGVDA 324 + FH + +PA LL K F F + + G K S S + +E + D Sbjct: 305 NVPFHTVMFPATLLGTRDVWKKVDFVKAFNWLTYYGGKFSTSQKRGVFTDAALEVLPADY 364 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 RYFL+ D + + VN DLA+ +GN V+R +S K + +P A Sbjct: 365 WRYFLMANAPESDDTSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFGDEVPAGKAAG 424 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 E++E + +R+L E E+M +A A + +L S + Y + + PW K++ + A Sbjct: 425 EAEERLGEEIARLLAEYEEHMDTLQFRKAAAALRALWSAGNSYLEEKAPWLEIKSDQEAA 484 Query: 445 STVLYVTVEVIRQLAILLQAFVP 467 + L + +I AI+ + F+P Sbjct: 485 ALTLRTAMNLIHLYAIVSEPFIP 507 >gi|84515258|ref|ZP_01002620.1| methionyl-tRNA synthetase [Loktanella vestfoldensis SKA53] gi|84510541|gb|EAQ06996.1| methionyl-tRNA synthetase [Loktanella vestfoldensis SKA53] Length = 570 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 118/523 (22%), Positives = 221/523 (42%), Gaps = 51/523 (9%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R G +VLF TDEHG AA AG Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLYARYLRKRGHEVLFLCATDEHGTPAELAAAKAGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + +AD +S+D F R++ ++H + + ++++ G I + Sbjct: 66 PVAAYCAEMHAVQARIADGFGLSFDHFGRSSSPQNHKLTQAMAGRLAEMGLIREVTEDQV 125 Query: 128 YSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------------ 164 YS+ D + D + +G Q +P + Sbjct: 126 YSVTDGRFLPDRYIEGTCPNCGFDSARGDQCDNCTKQLDPTDLINPRSTISGATDLEVRT 185 Query: 165 ---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--LKDLSLSRKTFDWGIK 219 + R S + L + +S ++ PI + ++ G L+D ++R DWGI Sbjct: 186 TKHLYLRQSELKAALADWIDSKKDW--PILTTSIAKKWLNDGDGLQDRGITRD-LDWGIP 242 Query: 220 I-------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD--------LHV 262 + P + YVW DA Y+ + D G+ ++W D Sbjct: 243 VRKGDQDWPGMEGKVFYVWFDAPIEYIACAQEWQDAGKGNDWERWWRTDKGAGDVRYTQF 302 Query: 263 IGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 +GKD + FH + +PA ++ P L + S ++ + G + S S G + + ++ + Sbjct: 303 MGKDNVPFHTLSFPATIMGTQQPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALDIL 362 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D R++L+ D + D ++ VN DLA+ +GN VSR + IP Sbjct: 363 PSDYWRWWLLSHAPETSDAEFTWDAFQQDVNKDLADVLGNFVSRITKFCRSKFSETIPAG 422 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 G + ++++ ++ L + +M + +A A++ ++ + Y A PW KT+ Sbjct: 423 GEHGAPEHALIAALTQRLTAYQGHMDAIEVRKAAAELRAIWVLGNEYLQANAPWTTIKTD 482 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 PD A+ + + + +IR A+L F+P + + + + D + Sbjct: 483 PDMAAMQVRLGLNLIRLYAVLSAPFIPDASKLLLEAMQTDDAD 525 >gi|66815711|ref|XP_641872.1| methionyl-tRNA synthetase [Dictyostelium discoideum AX4] gi|74856380|sp|Q54X95|SYMC_DICDI RecName: Full=Probable methionyl-tRNA synthetase, cytoplasmic; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|60469912|gb|EAL67895.1| methionyl-tRNA synthetase [Dictyostelium discoideum AX4] Length = 736 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 121/517 (23%), Positives = 225/517 (43%), Gaps = 53/517 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + ++ GTDE+G A + Sbjct: 18 ILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLKNYNCIYICGTDEYGTATETKALSE 77 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T K D+ +++ + +IS+D F RT+ + + ++ KI D G Sbjct: 78 GCTPKEICDKYHEIHKEIYEWFNISFDKFGRTSTNSQTEIAQDIFNKIKDNGYTLTQEIE 137 Query: 126 GWYSLRDEAYYNDDEVYKG---------ADGQYYNAQH---NPVQWM------------- 160 Y + + D +G A G + NP + + Sbjct: 138 QLYCEQTCKMFLADRFVEGTCPHCKFEDARGDQCDGCSKLLNPTELINPRCKVCSKPPVI 197 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGI 218 + F L Q ++ + E++ + E + ++VK LK ++R WG Sbjct: 198 KSTKHIFIDLPQLQQQVDQFVETNSKGGNWSENSIAITNTWVKGELKPRCITRD-LKWGT 256 Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVI---GKDILRFH 271 +P + + YVW DA Y++ T N K+W P ++ ++ GKD + FH Sbjct: 257 PVPMEEFKDKVFYVWFDAPIGYISITAEYTN---EWEKWWKNPENVKLVQFMGKDNVPFH 313 Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEEVGVDA 324 + +PA L+ + N L + + F+ ++ K SKS G+ + EV Sbjct: 314 TVIFPASLIGSKDNYTLLNNLSTTEFLNYETGKFSKSRNTGVFGDGAKATGIPSEV---- 369 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--YDGMIPTPGA 382 R++L+ D + D + N +L N GNLV+R + M+ + ++G++P G Sbjct: 370 WRFYLLNNRPESSDSIFSWDDFNFK-NNELLNNFGNLVNRVLKMLNTNAAFNGVVPKIGE 428 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 E D+ ++ L + + ++ + L +S+ + Y KPW+L + + Sbjct: 429 LNEVDKKLVQEVDEHLVQYFQKLEEISLKEGLKIAMSISKLGNTYMQDNKPWDLSGKDNE 488 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 R VL + + +I+ L+ LL+ ++P L +K+ L V Sbjct: 489 RCGQVLAILINLIKLLSTLLEPYIPSLTDKVHQQLNV 525 >gi|328849345|gb|EGF98527.1| hypothetical protein MELLADRAFT_50986 [Melampsora larici-populina 98AG31] Length = 675 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 122/528 (23%), Positives = 235/528 (44%), Gaps = 58/528 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGL--DVLFTTGTDEHGQK 57 + +R + I++A+ Y N PH+G+ + ADV AR+ R + VL+ GTDE+G Sbjct: 16 LSDRPNILITSALPYVNNAPHLGNIIGSTLSADVYARYRRTGPIPSQVLYICGTDEYGTT 75 Query: 58 IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117 A G++ D+ + +D + DIS+D F RTT + + C+ ++ + + Sbjct: 76 TETKALEEGLSPGALCDKYHQVHKDSYEWFDISFDHFGRTTTPKQTEICQEIFTALYNND 135 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYN------------------ 151 + + Y D+ + D V GA G + Sbjct: 136 HLVEHTVEQVYCNNDQRFLADRFVEGTCPKCGASGARGDQCDTCCQTLDAIDLIDKKCKI 195 Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI-LPIERRNEVISFVKSGLKDLSLS 210 H+PV + + + L Q + S+Y S E + ++++ GL++ L+ Sbjct: 196 CSHSPVT-RKSKHLYLNLPKLQKTIESWYSSAKEGKHWSANGKAFTEAWLRDGLRERCLT 254 Query: 211 RKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADL---HV 262 R WG+ +P D +MYVW DA Y + T Y D+ K+W P ++ Sbjct: 255 RD-LKWGVPVPLDGWKDKVMYVWFDAPIGYPSITANYTDD----WKKWWKNPEEVTLYQF 309 Query: 263 IGKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 +GKD + FH I +PA+L+ + + + ++ ++ K SKS N+ + E Sbjct: 310 MGKDNVPFHTILFPAYLMGTGEKWTMLNHISTTEYLQYENAKFSKS-NNIGVFGQNARET 368 Query: 321 GV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 GV + RY+L+ D + + N++L N +GN V+R + ++ ++P Sbjct: 369 GVPSEVWRYYLISTRPETNDSQFTWTDFIAKANSELLNNLGNFVNRIIKFCNARFNSIVP 428 Query: 379 TPGA--------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-D 429 P + F + D+ + +L + E+ ++ + ALA V+ + + ++Y D Sbjct: 429 DPLSWPIPGRDEFDQLDQEFVRDIDNLLNQYIESAESLKLRNALAIVMLISARGNQYLQD 488 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + L T+P R + ++ V++ ++ L++L+ F+P ++ I L Sbjct: 489 NKIDYNLLLTSPRRCAQIVLVSMNLVYLLSVLVHPFMPTTSDLILKQL 536 >gi|319787562|ref|YP_004147037.1| methionyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] gi|317466074|gb|ADV27806.1| methionyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] Length = 708 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 128/523 (24%), Positives = 206/523 (39%), Gaps = 73/523 (13%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ A+ Y N H+GH I AD+ R R G V + D HG I AA+ AGVT Sbjct: 7 VTNALPYANGPLHLGHLVGYIQADIWVRARRERGQTVHYVCADDTHGTPIMLAAEKAGVT 66 Query: 69 TKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 + F+ + R+F+D + +D + T + + + +G I + Sbjct: 67 PEAFIAATKAGHERDFQDFG----VHFDWYHSTHSDENRALTERFYAALDARGSIERRSI 122 Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWME------------ 161 Y + D V G + + A + P ++ Sbjct: 123 EQLYDPVKAMFLPDRYVKGTCPKCKSPDQYGDNCEACGATYGPTDLIDPRSAVSGATPEL 182 Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E +FF+L Y + L + + E I + GL+D +SR +G + Sbjct: 183 RASEHFFFKLGQYTEGLREWLRGDVALPGVKAKLAEWIEG-EGGLRDWDISRDAPYFGFE 241 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-------------HVIGKD 266 IP P YVW+DA Y ++ L G+KA F A + H IGKD Sbjct: 242 IPGHPGKYFYVWLDAPIGYFSSLLALAR-SGNKAGFDEAAMERLLQPGDHAELHHFIGKD 300 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DA 324 I+ FH ++WPA L L P ++ +G++ G K+SKS G I + +VG+ DA Sbjct: 301 IVNFHGLFWPAVLEGNGLRKPDRLHVNGYLTVDGAKMSKSRGTFIMARTYL-DVGLEPDA 359 Query: 325 LRYFLVREIACGKDGFYDKDGLK-----KRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 LRY+ AC G D L RVN+DL N+ SR ++ + ++ T Sbjct: 360 LRYYF----ACKSSGGVDDLDLNLSDFVARVNSDLVGKFANIASRCARLLDVHFGNVLAT 415 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR-----------YF 428 P A + + + +++ N++ ++ + V R Y Sbjct: 416 PPALVDETGDLSEGWAETARQLLANVRGRIETAPELYTEDNFAAVTRNAMAAADMANEYI 475 Query: 429 DAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKL 469 A PW L K RA VL ++ +A +L+ VP + Sbjct: 476 AATAPWALAKDPARRADLHLVLSTAIQAFADIAGVLKPIVPGI 518 >gi|254485609|ref|ZP_05098814.1| methionyl-tRNA synthetase [Roseobacter sp. GAI101] gi|214042478|gb|EEB83116.1| methionyl-tRNA synthetase [Roseobacter sp. GAI101] Length = 570 Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 114/517 (22%), Positives = 220/517 (42%), Gaps = 47/517 (9%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R G +VLF TDEHG AA AG Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLYARYLRARGHEVLFLCATDEHGTPAELAAAKAGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + + +AD +S+D F R++ ++ + + ++G I + Sbjct: 66 PVEDYCAEMHEVQARIADGFGLSFDHFGRSSSIQNQRLTQHFAGALYNEGLIEEVEQRQI 125 Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNP---------------VQWME 161 YS D + D E +G Q +P ++ Sbjct: 126 YSETDGRFLPDRYVEGTCPNCGFEDARGDQCDNCTKQLDPEDLINPRSTVSGATDLEMRA 185 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI- 220 + F + S +D+L + S ++ + + GL+D ++R WG+ + Sbjct: 186 TKHLFLKQSKMKDRLDDWINSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD-LSWGVPVK 244 Query: 221 ------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD--------LHVIG 264 P + YVW DA Y+ ++D GS ++W D +G Sbjct: 245 RGDEDWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGSDWERWWRTDKGADDVRYTQFMG 304 Query: 265 KDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 KD + FH + +PA ++ +N P L + S ++ + G + S S G + + +E + Sbjct: 305 KDNVPFHTLSFPATIMGSNEPWKLVDYIKSFNYLTYDGGQFSTSRGRGVFMDQALEILPA 364 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R++L+ D + + + VN DLA+ +GN +SR + +P G Sbjct: 365 DTWRWWLLSHAPETSDAEFTWENFQASVNKDLADVLGNFISRITKFCRSKFSEAVPEAGE 424 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 + ++ ++++ S + + M+ + ++ A++ ++ + + Y A+ PW KT+PD Sbjct: 425 YGPAEHALIADLSERVSRYQAAMEAMEVRKSAAELRAIWAAGNEYLQAEAPWTTFKTDPD 484 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +A+ + + + +I A+L F+P A + + V Sbjct: 485 KAAAQVRLALNLIPFYAVLSAPFIPDAAASMLSCVRV 521 >gi|126738818|ref|ZP_01754514.1| methionyl-tRNA synthetase [Roseobacter sp. SK209-2-6] gi|126719999|gb|EBA16706.1| methionyl-tRNA synthetase [Roseobacter sp. SK209-2-6] Length = 581 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 119/531 (22%), Positives = 219/531 (41%), Gaps = 58/531 (10%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++AI Y N H+G+ + AD+ ARF R G +VLF TDEHG AA Sbjct: 3 RILITSAIPYINGIKHLGNLVGSQLPADLYARFQRGIGNEVLFLCATDEHGTPAELAAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 A F + ++A +S+D F R++ +H + K+ + G I + Sbjct: 63 AEKPVAEFCAEMHGVQSEIAKGFALSFDHFGRSSSPENHKLTQHFAGKLEEAGLIREVED 122 Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG--------- 164 YS+ D + D E +G + Q +P + Sbjct: 123 RQVYSIADGRFLPDRYVEGTCPNCGFENARGDQCEECTKQLDPTDLINPRSAISGSTDLE 182 Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 F S +D+L ++ +S ++ + + GL+D ++R DWG+ Sbjct: 183 VRATKHLFLCQSQMKDQLDAWIDSKADWPILTTSIAKKWLHDGDGLQDRGITRD-LDWGV 241 Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD-------- 259 + P + YVW DA Y+ G +G ++W D Sbjct: 242 PVKKGGEDWPGMEGKVFYVWFDAPIEYIACAGEWAEANGKSDADWQRWWRTDKGAEDVKY 301 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKK-----------VFSHGFILHKGEKISKSLG 308 + +GKD + FH + +PA +L N K + S ++ + G + S S G Sbjct: 302 VQFMGKDNVPFHTLSFPATILGTNNYNEKSGDPERWKAVDYIKSFNYLNYDGGQFSTSKG 361 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 I + +E + D R++L+ D + + ++ VN DLA+ +GN VSR Sbjct: 362 RGIFMDQALEILPADYWRWWLLSHAPENSDAEFTWEDFQQSVNKDLADVLGNFVSRITKF 421 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428 + +P G F +++++ + +Q +M+ + ++ ++ ++ + Y Sbjct: 422 CRSKFGEEVPAAGEFGPEEDALIEELTNRIQAYEGHMEAMEVRKSAQELRAIWVAGNEYL 481 Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + PW KT+PD+A+ + + + +I A+L F+P A K+ D + V Sbjct: 482 QSTAPWSTFKTDPDKAAAQVRLGLNLIPLYAVLSAPFIPGSAAKMLDAMGV 532 >gi|51598840|ref|YP_073028.1| methionyl-tRNA synthetase [Borrelia garinii PBi] gi|68565975|sp|Q660T5|SYM_BORGA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|51573411|gb|AAU07436.1| methionyl-tRNA synthetase [Borrelia garinii PBi] Length = 724 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 113/500 (22%), Positives = 222/500 (44%), Gaps = 43/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ A+ Y N PH+G+ +++ AD AR+ ++ G++ L+ GTDE+G A + Sbjct: 7 VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYICGTDEYGTATETKALIEKTS 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + + + +I +D F RTT K H D + + K+ G I + ++ Sbjct: 67 PLELCNKYYKIHKSIYKWFNIEFDIFGRTTNKHHQDIVQNFFLKLEKNGYIKERETEQFF 126 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +D + D + KG + + NP+ + + + K Sbjct: 127 CNKDSIFLADRYVIGECPECQSIAKGDQCENCSKLLNPIDLINPKCIICKNKPVLKKTNH 186 Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223 Y P+ +E+ +N S F++ GLK+ +++R WGI +P Sbjct: 187 LYIDLPKIKRKLEKWIKNSTTSKNWNTNALKMTNAFLRDGLKERAITR-DLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276 + YVW DA Y++ T L S +W + V IGKD + FH + +P Sbjct: 246 GYENKVFYVWFDAPIGYISITKNLVKNWES---WWKNNEQVNLVQFIGKDNILFHTVIFP 302 Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333 + + + N + ++ S ++ ++ K SKS G I +VI + D R+++ Sbjct: 303 SIEIGSKENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDVITTGIPSDVWRFYIYYNR 362 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + L +RVN +L + NLV+R ++ K + +I T + + I+ Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQKKFFGDVIETIEIQNKFWKQIIPK 422 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++L ++ + AL +++ + S ++ F +PW+ K ++P ++ + Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKDSSPQETKELISNLIY 478 Query: 454 VIRQLAILLQAFVPKLANKI 473 +IR L+IL+ F+P+ + KI Sbjct: 479 LIRDLSILMMPFIPETSKKI 498 >gi|260220414|emb|CBA27928.1| Methionyl-tRNA synthetase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 547 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/332 (29%), Positives = 156/332 (46%), Gaps = 33/332 (9%) Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA---- 258 GL D +SR +GI+IPD P YVW+DA YL + + G KAK Sbjct: 63 GLGDWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNWFDKGGPKAKHGDTRSFD 122 Query: 259 ---------DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLG 308 H IGKDI+ FH ++WPA L + P VF HGF+ ++ GEK+SKS G Sbjct: 123 EYMAASDTEQYHFIGKDIVTFHTLFWPAMLKFSGRKTPNNVFVHGFLTVNNGEKMSKSRG 182 Query: 309 NVIDPIEVIEEVGVDA--LRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 +DP++ + +G++A LRY+L +++ +D ++ D RVN+DL N+ SR+ Sbjct: 183 TGLDPLKYL-SLGMNAEWLRYYLAAKLSARNEDIDFNADDFMARVNSDLIGKYVNIASRA 241 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 I K +DG + + F + ++L+ + + + + +A +++ L +V+ Sbjct: 242 AGFITKRFDGKLTS--DFGPTGAALLAEVRGASDALAQMYEAREYGKATREIMLLADKVN 299 Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 Y D KPW+L K N V V + L L +P LA + L V + Sbjct: 300 AYVDQNKPWDLAKDVANNQALHQVCSVLINTFATLTRYLSPVLPGLAQAVQGFLGVDMQQ 359 Query: 484 ----------RCFQSLDQRLKPGFMLHKTFDP 505 + +Q L QR+ P L F+P Sbjct: 360 WNVAGDVQAIQPYQHLMQRVTPE-QLDALFEP 390 >gi|302844133|ref|XP_002953607.1| hypothetical protein VOLCADRAFT_82392 [Volvox carteri f. nagariensis] gi|300261016|gb|EFJ45231.1| hypothetical protein VOLCADRAFT_82392 [Volvox carteri f. nagariensis] Length = 816 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 118/518 (22%), Positives = 229/518 (44%), Gaps = 46/518 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + I++A+ Y N PH+G+ ++ AD AR+ R G + ++ GTDE+G A Sbjct: 39 RRNVLITSALPYVNNVPHLGNIIGCVLSADCYARYCRARGHNCIYMCGTDEYGTATETKA 98 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+T + D+ ++ DI++D F RT + + ++K + G + + Sbjct: 99 LEEGLTCQQICDKYHAIHAEIYRWFDIAFDRFGRTPTRAQTAIAQDIFKSLHANGQLVQQ 158 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----------NPVQWMEEE----GYFF 167 YS + D VY Y+ NP + + G Sbjct: 159 EMQQLYSEAAGKFLADRFVYGTCPKCGYDDARGDQCDGCGNLLNPTELINPRCKLTGTTP 218 Query: 168 RLSAYQDKLLSYYESHP---EFILPIERRNE--------VISFVKSGLKDLSLSRKTFDW 216 L + + L + P E+I + ++++ GLK ++R W Sbjct: 219 VLRSTRHVFLDLPQLSPALQEYITTTSTQGGWSANCVQLTNAWMRDGLKLRCITRD-LKW 277 Query: 217 GIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHVI---GKDILRF 270 G +P + + YVW DA Y++ T GY PD P D+ ++ GKD + F Sbjct: 278 GTPVPLEGYEDKVFYVWFDAPIGYISITAGY--TPDWEAWWKSPKDVELVQFMGKDNVPF 335 Query: 271 HAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327 H + +PA L P + K + ++ ++G K SKS G + + + + V+ RY Sbjct: 336 HTVIFPATQLGTQQPWTMMKSISVTEYLNYEGGKFSKSRGTGVFGNQAKDTGIPVEVWRY 395 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTE 385 +L+ D + L + N++L +GN ++RS+ + K ++G+IP T E Sbjct: 396 YLLANRPEQADTDFKWSDLAAKNNSELLANLGNFINRSLMFVAKFFEGVIPGATEAGLAE 455 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 ++E + ++E ++ + L V+S+ ++ +++ KPW K + D+ + Sbjct: 456 AEE-----LGKTVEEYISALERIKLKEGLRLVMSISADGNKFLQDTKPWVAVKEDKDKCA 510 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 T++ ++ ++R LA ++ ++P L++KI + + E+ Sbjct: 511 TLVATSMGLVRLLAAVMAPYMPSLSSKILSQMALPLES 548 >gi|219684348|ref|ZP_03539292.1| methionyl-tRNA synthetase [Borrelia garinii PBr] gi|219672337|gb|EED29390.1| methionyl-tRNA synthetase [Borrelia garinii PBr] Length = 724 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 113/500 (22%), Positives = 219/500 (43%), Gaps = 43/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ A+ Y N PH+G+ +++ AD AR+ ++ G++ L+ GTDE+G A T Sbjct: 7 VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYICGTDEYGTATETKALIEKTT 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + + +I +D F RTT K H D + + K+ G I + ++ Sbjct: 67 PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKHHQDIVQNFFLKLEKNGYIKERETEQFF 126 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +D + D + KG + + NP+ + + + K Sbjct: 127 CNKDSIFLADRYVIGECPECQSIAKGDQCEKCSKLLNPIDLINPKCIICKSKPVLKKTNH 186 Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223 Y P+ +E +N S F++ GLK+ +++R WGI +P Sbjct: 187 LYIDLPKIKTKLEEWIKNSTASKNWNTNALKMTNAFLRDGLKERAITR-DLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276 + YVW DA Y++ T N + +W + V IGKD + FH + +P Sbjct: 246 GYENKVFYVWFDAPIGYISIT---KNIVKNWESWWKNNEQVNLIQFIGKDNILFHTVIFP 302 Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333 + + N + ++ S ++ ++ K SKS G I +VI + D R+++ Sbjct: 303 CIEIGSKENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDVITTGIPSDVWRFYIYYNR 362 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + L +RVN +L + NLV+R ++ K + +I T + + I+ Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQKKFFGDVIETIEIQNKFWKQIIPK 422 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++L ++ + AL +++ + S ++ F +PW+ K ++P ++ + Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKDSSPQETKELISNLIY 478 Query: 454 VIRQLAILLQAFVPKLANKI 473 +IR L+IL+ F+P+ + KI Sbjct: 479 LIRDLSILMMPFIPETSKKI 498 >gi|302756297|ref|XP_002961572.1| hypothetical protein SELMODRAFT_164891 [Selaginella moellendorffii] gi|300170231|gb|EFJ36832.1| hypothetical protein SELMODRAFT_164891 [Selaginella moellendorffii] Length = 784 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 125/521 (23%), Positives = 225/521 (43%), Gaps = 62/521 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + +++A+ Y N PH+G+ ++ ADV AR+ RL G ++++ GTDE+G A Sbjct: 9 RRNILVTSALPYVNNVPHLGNIIGSVLSADVFARYGRLRGYNIIYMCGTDEYGTATETKA 68 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + K D+ + + D DI +D F RT+ C+ ++KK+ + +Y+ Sbjct: 69 LEEKTSPKEICDKYHDVHKKVYDWFDIRFDKFGRTSSPEQTVICQSIFKKLLAQDRLYED 128 Query: 123 ---------CYSGWYSLRDEAYYND----DEVYKGADGQYYNAQHNPVQWMEEEG----- 164 C S L D +G + NP + +E + Sbjct: 129 KINQACRLYCESCQRFLADRFVIGTCPKCGMTARGDQCEKCTHVLNPGELVEPKCKICNS 188 Query: 165 ---------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRK 212 F L +++L+ Y E I N + ++++ GLK ++R Sbjct: 189 SPHLRETTHLFLDLPKIKNELVDYVEKTS--IAGGWSSNSITITNAWIRDGLKGRCITRD 246 Query: 213 TFDWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGK 265 WG+ +P P++ + YVW DA Y++ T N ++W ++ +GK Sbjct: 247 -LKWGVPVPL-PRFEDKVFYVWFDAPIGYISITA---NYTPEWEQWWKSEDVELFQFMGK 301 Query: 266 DILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322 D + FH + +P LL + K + + ++ ++G K SKS G V V V Sbjct: 302 DNVTFHTVIFPCTLLGTGERWTMMKTLSATEYLNYEGAKFSKSAGIGVFGNDAQDTNVPV 361 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP 378 + RY+L+ D F+ L+ + N +L +GN V R +S + K Y IP Sbjct: 362 EVWRYYLLSIRPEAADTFFSWADLQAKQNNELLKNLGNFVHRCLSFLAKPEGQGYGSKIP 421 Query: 379 -TPGAFTESDESILSV-----CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 PGA +E L+V S +LQ+ ++M+ + L +S+ S + Y + Sbjct: 422 DAPGA----EEHALTVKLAEEVSELLQQYVDSMEKTKLKNGLKVAMSISSLGNSYLQESE 477 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 W L K + + V+ + +++ LA +L+ F+P + K+ Sbjct: 478 FWRLYKEDRPSCNIVVRTAIGLVKILATILEPFMPSFSKKV 518 >gi|254465029|ref|ZP_05078440.1| methionyl-tRNA synthetase [Rhodobacterales bacterium Y4I] gi|206685937|gb|EDZ46419.1| methionyl-tRNA synthetase [Rhodobacterales bacterium Y4I] Length = 575 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 112/525 (21%), Positives = 222/525 (42%), Gaps = 49/525 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M ++ I++AI Y N H+G+ + AD+ ARF R G +V+F TDEHG Sbjct: 1 MDGMARILITSAIPYINGIKHLGNLVGSQLPADLYARFQRGRGNEVMFLCATDEHGTPAE 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AA A + + ++A +S+D F R++ ++H + K+++ G I Sbjct: 61 LAAAKADKPVAEYCAEMHAIQAEIAKGFALSFDHFGRSSSPQNHALTQHFAGKLAEAGLI 120 Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160 + YS D + D E +G + Q +P + Sbjct: 121 REVTEKQVYSNADGRFLPDRYIEGTCPNCGYERARGDQCEECTKQLDPTDLINPRSAVSG 180 Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 E + + S +D+L ++ +S ++ + + GL+D ++R Sbjct: 181 STDLEVRETKHLYLCQSQLKDQLDAWIDSKKDWPVLTTSIAKKWLHDGDGLQDRGITRD- 239 Query: 214 FDWGIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPAD--- 259 DWG+ + P + YVW DA Y+ + PD ++W D Sbjct: 240 LDWGVPVKKGDEDWPGMEGKVFYVWFDAPIEYIACAKEWADASGRPDADWQRWWRTDKGA 299 Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVID 312 + +GKD + FH + +PA +L + P L + S ++ + G + S S G + Sbjct: 300 EDVKYVQFMGKDNVPFHTLSFPATILGSGEPWKLVDHLKSFNYLNYDGGQFSTSQGRGVF 359 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 + +E + D R++L+ D + + ++ VN DLA+ +GN VSR Sbjct: 360 MDQALEILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSK 419 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 + +P G + +++++ + ++ +M+ + ++ ++ ++ + Y + Sbjct: 420 FGEEVPAGGEYGPQEQALIDELTTRIRAYEGHMEAMEVRKSSQELRAIWVAGNEYLQSAA 479 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 PW + K +P+RA+ + + + +IR A+L F+P + + L Sbjct: 480 PWSVFKEDPERAAAQVRLGLNLIRLYAVLSAPFIPHATDTLMAAL 524 >gi|219685229|ref|ZP_03540049.1| methionine--tRNA ligase [Borrelia garinii Far04] gi|219673325|gb|EED30344.1| methionine--tRNA ligase [Borrelia garinii Far04] Length = 724 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 113/500 (22%), Positives = 219/500 (43%), Gaps = 43/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ A+ Y N PH+G+ +++ AD AR+ ++ G++ L+ GTDE+G A T Sbjct: 7 VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYICGTDEYGTATETKALIEKTT 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + + +I +D F RTT K H D + + K+ G I + ++ Sbjct: 67 PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKHHQDIVQNFFLKLEKNGYIKERETEQFF 126 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +D + D + KG + + NP+ + + + K Sbjct: 127 CNKDSIFLADRYVIGECPKCQSIAKGDQCENCSKLLNPIDLINPKCIICKSKPVLKKTNH 186 Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223 Y P+ +E +N S F++ GLK+ +++R WGI +P Sbjct: 187 LYIDLPKIKTKLEEWIKNSTASKNWNTNALKMTNAFLRDGLKERAITR-DLKWGISVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276 + YVW DA Y++ T N + +W + V IGKD + FH + +P Sbjct: 246 GYENKVFYVWFDAPIGYISIT---KNIVKNWESWWKNNEQVNLVQFIGKDNILFHTVIFP 302 Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333 + + N + ++ S ++ ++ K SKS G I +VI + D R+++ Sbjct: 303 CIEIGSKENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDVITTGIPSDVWRFYIYYNR 362 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + L +RVN +L + NLV+R ++ K + +I T + + I+ Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQKKFFGDVIETIEIQNKFWKQIIPK 422 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++L ++ + AL +++ + S ++ F +PW+ K ++P ++ + Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKDSSPQETKELISNLIY 478 Query: 454 VIRQLAILLQAFVPKLANKI 473 +IR L+IL+ F+P+ + KI Sbjct: 479 LIRDLSILMMPFIPETSKKI 498 >gi|16125727|ref|NP_420291.1| methionyl-tRNA synthetase [Caulobacter crescentus CB15] gi|221234484|ref|YP_002516920.1| methionyl-tRNA synthetase [Caulobacter crescentus NA1000] gi|25009392|sp|Q9A884|SYM_CAUCR RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|254782857|sp|B8H5U4|SYM_CAUCN RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|13422851|gb|AAK23459.1| methionyl-tRNA synthetase [Caulobacter crescentus CB15] gi|220963656|gb|ACL95012.1| methionyl-tRNA synthetase [Caulobacter crescentus NA1000] Length = 569 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 122/518 (23%), Positives = 219/518 (42%), Gaps = 53/518 (10%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++A+ Y N H+G+ A M+ ADV ARF R G + L+ TDEHG AA Sbjct: 3 RILITSALPYINGIKHLGNLAGSMLPADVYARFKRAQGHETLYICATDEHGTPAELAAAA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + + ++ +S+D F R++ ++H + + + D G I + Sbjct: 63 AGQDVATYCAEQHVLQHEVGRAFGLSWDHFGRSSSPQNHRLTQHFCQALEDHGLIEERVD 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN------------------PVQ 158 YS+ D+ + D V ++ A G + N ++ Sbjct: 123 QMVYSVDDKRFLPDRYVEGTCPHCKFEKARGDQCDNCGNLLDPTDLIDPYSVISGSRNIE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + + + + QDK+ ++ ++H ++ P R+ + GL D ++R WGI Sbjct: 183 VRDTKHLYLLQTKMQDKIRAWVDAHADW--PPLARSIAYKHLDEGLIDRGITRD-LAWGI 239 Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD--------LH 261 + D + + YVW DA Y+ T +PD ++W D + Sbjct: 240 PVAQDGVPRPGFEEKVFYVWFDAPIEYIAATQEWAEGSPDRDWKRWWRTDAGADDVRYVQ 299 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGNVIDPIEVI 317 +GKD + FH + +PA +L + P K F+ ++ G K S S + + Sbjct: 300 FMGKDNVAFHTVSFPATILGSEEPWKSVDMLKAFN--WLNWYGGKFSTSNKRGVFMDAAL 357 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E + D R++L G D + + VN DLA+ +GN V+R + ++G++ Sbjct: 358 EILPPDLWRWYLTANSPEGSDTAFTWEQFASAVNRDLADVLGNFVNRILKFNESKFEGVV 417 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G +E + + S L ++ E M I ++ + +L + Y PW Sbjct: 418 PAGGEPGPLEEKLFADVSARLADLAEQMDAIEIRKSAQALRALWVVGNEYLQEAAPWTAI 477 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 KT+ DRA+ ++ + + A + F+P A KI D Sbjct: 478 KTDRDRAAVIVRTALNLAALYAKISAPFIPFAAEKIGD 515 >gi|83952859|ref|ZP_00961589.1| methionyl-tRNA synthetase [Roseovarius nubinhibens ISM] gi|83835994|gb|EAP75293.1| methionyl-tRNA synthetase [Roseovarius nubinhibens ISM] Length = 570 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 112/523 (21%), Positives = 226/523 (43%), Gaps = 51/523 (9%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R G +VLF TDEHG AA AG Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLFARYLRGRGQEVLFLCATDEHGTPAELAAAKAGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + + ++A +S+D F R++ ++H + ++++ G I + Sbjct: 66 PVEQYCAEMHDIQAEIAKGFRLSFDHFGRSSSPQNHRLTQHFAGRLAEAGLIEEVSEKQV 125 Query: 128 YSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------------ 164 YS D + D + +G + Q +P +E Sbjct: 126 YSNADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIEPRSAVSGSTDLEVRE 185 Query: 165 ---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--LKDLSLSRKTFDWGIK 219 + R S+ +D+L ++ ++ ++ PI + ++ G L+D ++R DWG+ Sbjct: 186 TRHLYLRQSSMRDELNAWIDAKKDW--PILTTSIARKWLNDGDGLQDRGITRD-LDWGVP 242 Query: 220 I-------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD--------LHV 262 + P + YVW DA Y+ + ++D G ++W D Sbjct: 243 VKKGEADWPGMEGKVFYVWFDAPIEYIACSQEWVDAGKGDDWERWWRTDKGAEDVTYTQF 302 Query: 263 IGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 +GKD + FH + +PA +L + P L + S ++ + G + S S G + + ++ + Sbjct: 303 MGKDNVPFHTLSFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQALDIL 362 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D R++L+ D + + + VN DLA+ +GN VSR + +P Sbjct: 363 PADYWRWWLLSHAPESSDSEFTWENFQASVNKDLADVLGNFVSRVTKFCRSKFGEEVPAG 422 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 GAF + +++ + ++ +M+ + ++ ++ ++ + Y + PW K + Sbjct: 423 GAFGAEETALIETLTTRIRAYEGHMEAMEVRKSANELRAIWVAGNEYLQSAAPWATFKDD 482 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 P++A+ + + + +IR A+L F+P + + + D+ Sbjct: 483 PEKAAAQVRLALNLIRLYAVLSAPFIPDASAAMLKSMQTEDDQ 525 >gi|310815507|ref|YP_003963471.1| methionyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] gi|308754242|gb|ADO42171.1| methionyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] Length = 569 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 117/521 (22%), Positives = 220/521 (42%), Gaps = 47/521 (9%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R G +V+F TDEHG AA AG Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLYARYQRGRGHEVMFLCATDEHGTPAEIAAAKAGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + ++A +S+D F R++ ++H + ++++G I + Sbjct: 66 PVAEYCAEMHDVQAEIAKGFRLSFDHFGRSSSAQNHKLTQHFAGVLAERGFIREVTEMQM 125 Query: 128 YSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV---------------QWME 161 YS D Y D + +G Q +PV + E Sbjct: 126 YSPTDGRYLPDRYIEGTCPNCGFPDARGDQCDNCTKQLDPVDLINPRSAISGATDLEMRE 185 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI- 220 + + S QDK+ ++ +S ++ + + GL+D ++R DWGI + Sbjct: 186 TKHLYLCQSQLQDKIAAWIDSKTDWPVLTTSIAKKWLTDGDGLQDRGITRD-LDWGIPVK 244 Query: 221 ------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD--------LHVIG 264 P + YVW DA Y+ + ++D G ++W D +G Sbjct: 245 KGDADWPGMEGKVFYVWFDAPIEYIASAQEWVDAGKGVDWERWWRTDKGADDVTYTQFMG 304 Query: 265 KDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 KD + FH + +PA +L + P L + S ++ + G + S S G + + + + Sbjct: 305 KDNVPFHTLTFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALSILPA 364 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R++L+ D + D + VN DLA+ +GN VSR + +IP G Sbjct: 365 DYWRWWLLSHAPETSDSEFTWDNFQMSVNKDLADVLGNFVSRVTKFCRSKFGEVIPEGGT 424 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 + + ++++ ++ LQ M + +A +++ ++ + Y + PW KT+ + Sbjct: 425 WGARENALIAELTQRLQAYEGFMDAMEVRKASSELRAIWVAGNEYLQSAGPWTTIKTDTE 484 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 A+ + + +IR A+L F+P + + + AD+ Sbjct: 485 TAAMQTRLGLNLIRLYAVLSAPFIPDASATMLAAMKTADDQ 525 >gi|111115415|ref|YP_710033.1| methionyl-tRNA synthetase [Borrelia afzelii PKo] gi|216263519|ref|ZP_03435514.1| methionyl-tRNA synthetase [Borrelia afzelii ACA-1] gi|123145679|sp|Q0SMS1|SYM_BORAP RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|110890689|gb|ABH01857.1| methionyl-tRNA synthetase [Borrelia afzelii PKo] gi|215980363|gb|EEC21184.1| methionyl-tRNA synthetase [Borrelia afzelii ACA-1] Length = 724 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 117/500 (23%), Positives = 218/500 (43%), Gaps = 43/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+ A+ Y N PH+G+ +++ AD AR+ ++ G++ L+ GTDE+G A T Sbjct: 7 ITAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYICGTDEYGTATETKALIEKTT 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + + +I +D F RTT K H +T + + K+ G I + ++ Sbjct: 67 PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKHHQETVQNFFLKLEKNGYIKERETEQFF 126 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +D + D + KG + NP + + + K Sbjct: 127 CNKDLIFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186 Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223 Y P+ +E+ +N S F++ GLK+ +++R WGI +P Sbjct: 187 LYIDLPKIKTKLEKWIKNPTTSKNWNTNALKMTNAFLRDGLKERAITR-DLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276 + YVW DA Y++ T N + +W + V IGKD + FH I +P Sbjct: 246 GYENKVFYVWFDAPIGYISIT---KNIVKNWESWWKNNKQVNLVQFIGKDNILFHTIMFP 302 Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333 + + N ++ S ++ ++ K SKS G I +VI + D R+++ Sbjct: 303 CIKIGSKENWTTLNQLSSSEYLNYENLKFSKSEGTGIFGNDVITTGIPSDVWRFYIYYNR 362 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + L +RVN +L + NLV+R ++ K + +I T + E I Sbjct: 363 PEKSDFQFIWQDLMERVNTELIDNFSNLVNRVLTFQKKFFGDVIETIEIQHKFWEQITPK 422 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++L + N + AL +++ + S ++ F +PW+ K+++P ++ + Sbjct: 423 YNKILNLFK----NTELKSALKEILKISSFGNKIFQDNEPWKRKESSPQEIKELILNLIY 478 Query: 454 VIRQLAILLQAFVPKLANKI 473 +IR L+IL+ F+P+ + KI Sbjct: 479 LIRDLSILMMPFIPETSKKI 498 >gi|163735330|ref|ZP_02142764.1| methionyl-tRNA synthetase [Roseobacter litoralis Och 149] gi|161391339|gb|EDQ15674.1| methionyl-tRNA synthetase [Roseobacter litoralis Och 149] Length = 582 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 114/521 (21%), Positives = 215/521 (41%), Gaps = 49/521 (9%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E+ I++AI Y N H+G+ + AD+ AR+ R G +VLF TDEHG AA Sbjct: 12 ERHLITSAIPYINGIKHLGNLVGSQLPADLYARYLRARGHEVLFLCATDEHGTPAELAAA 71 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG + + ++A +S+D F R++ ++H + K+ I + Sbjct: 72 KAGKPVDQYCAEMHAIQSEIAKGFQLSFDHFGRSSSPQNHALTQHFAGKLDAANLIDEVV 131 Query: 124 YSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG-------- 164 YS D + D + +G + Q +P +E Sbjct: 132 EKQVYSHADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIEPRSAISGSTDL 191 Query: 165 -------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + + S +D+L ++ +S ++ + + GL+D ++R DWG Sbjct: 192 EVRQTKHLYLKQSVLKDQLDAWIDSKTDWPILTTSIAKKWLHDGDGLRDRGITRD-LDWG 250 Query: 218 IKIPDDPQ-------YIMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPAD------- 259 I + Q + YVW DA Y+ +G + ++W D Sbjct: 251 IPVKKGTQDWPGMEGKVFYVWFDAPIEYIACASEWAEANGLEPSEWERWWRTDKGAEDVR 310 Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316 +GKD + FH + +PA LL + P + + S ++ + G + S S G I + Sbjct: 311 YTQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGIFMDQA 370 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 ++ + D R++L+ D + + + VN DLA+ +GN VSR + Sbjct: 371 LDILPADYWRWWLLSHAPENSDAEFTWENFQTSVNKDLADVLGNFVSRITKFCSAKFGDQ 430 Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 +P G + ++ +L+ L ++NM + ++ ++ ++ + + Y PW + Sbjct: 431 VPAGGHYGPTELDLLNRLDESLTRYQDNMSAMEVRKSAQELRAIWASGNEYLQTVAPWTV 490 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 KT+P+ A+ + + + +L FVP+ + KI + L Sbjct: 491 FKTDPETAAMQTRLGLNLALLFGVLSSPFVPEASEKILNCL 531 >gi|295837687|ref|ZP_06824620.1| methionine-tRNA ligase [Streptomyces sp. SPB74] gi|197695943|gb|EDY42876.1| methionine-tRNA ligase [Streptomyces sp. SPB74] Length = 572 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 131/515 (25%), Positives = 228/515 (44%), Gaps = 56/515 (10%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N H+G+ M+ ADV AR+ R G +VL+ TDEHG AA GV Sbjct: 6 ITSALPYINGIKHLGNMVGSMLPADVYARYLRQRGHEVLYICATDEHGTPAELAAAAQGV 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 F + + D +++D F R++ ++ +T + +++ + G I + Sbjct: 66 PVAEFCATAHDAQKAVYDGFSLAFDHFGRSSSAQNRETTQHFARRLHENGFIEERAIRQV 125 Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP---------VQWME 161 YS D + D V Y A G Q N NP ++ E Sbjct: 126 YSPVDGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLINPRSAISGSTELEVRE 185 Query: 162 EEGYFFRLSAYQDKLLSY----YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + F S Q+++ + +S P+ I R+ ++ GL D +++R DWG Sbjct: 186 TKHLFLLQSKLQEEVERWIDATADSWPQLSSSIARK-----WLTEGLHDRAITRD-LDWG 239 Query: 218 IKIPDD--PQY-----IMYVWIDALTNYLTTTGYL--DNPDGS----KAKFWPAD----L 260 + +P D P+ + YVW DA Y+ T + P+G+ K+ ++ A Sbjct: 240 VPVPGDVWPELAAEGKVFYVWFDAPIEYIGATREWADEAPEGAGRDWKSWWYEAGDVRYT 299 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVF--SHGFILHKGEKISKSLGNVIDPIEVIE 318 +GKD + FH++ +PA + P + F S ++ + G K S S + + +E Sbjct: 300 EFMGKDNVPFHSVMFPATQIGTREPWKRVDFLKSFNWLNYYGGKFSTSQNRGVFTHDALE 359 Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 + D RYF++ D + + + VN DLA+ +GN V+R +S K + +P Sbjct: 360 LLPADYWRYFMMANAPESDDTSFTWEHFQATVNKDLADTLGNFVNRVLSFSRKRFGDAVP 419 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 GA E++ + +R+L E E M+ +A A + +L S + Y + + PW K Sbjct: 420 EGGAPGEAEAKLGEEIARLLAEYEEQMEALQFRKAAAALRALWSAGNSYLEEKAPWLEIK 479 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 T+ A+ L + +I A++ + FVP A + Sbjct: 480 TDQAAAALTLRTAMNLIHLYAVVSEPFVPTTAKAM 514 >gi|297800908|ref|XP_002868338.1| hypothetical protein ARALYDRAFT_493536 [Arabidopsis lyrata subsp. lyrata] gi|297314174|gb|EFH44597.1| hypothetical protein ARALYDRAFT_493536 [Arabidopsis lyrata subsp. lyrata] Length = 798 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 124/520 (23%), Positives = 228/520 (43%), Gaps = 51/520 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV AR+ RL G + ++ GTDE+G A Sbjct: 16 KRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIYICGTDEYGTATETKA 75 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T K D+ +++ D DIS+D F RT+ + C+ ++KK+ D + + Sbjct: 76 LEENCTPKEICDKYHAIHKEVYDWFDISFDKFGRTSTPEQTEVCQAIFKKLWDNKWLSEN 135 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y + + D V + N E+ G + +D ++ Sbjct: 136 TMQQLYCDTCKKFLADRLVEGSCPFEGCNYDSARGDQCEKCGKLLNPTELKDPKCKVCQN 195 Query: 183 HPE-------FI-LPI--ERRNEVI------------------SFVKSGLKDLSLSRKTF 214 P FI LP+ +R + I ++++ GL+ ++R Sbjct: 196 TPRIRDTDHLFIELPLLKDRLEKYINETSVAGSWSQNAIQTTNAWLRDGLRQRCITRD-L 254 Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDI 267 WG+ +P + + + YVW DA Y++ T + K+W P ++ + +GKD Sbjct: 255 KWGVPVPHEKYKEKVFYVWFDAPIGYVSITSCYTS---EWEKWWKNPENVELYQFMGKDN 311 Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDA 324 + FH + +P+ L N L K + ++ ++ K SKS G + +V + + V+ Sbjct: 312 VPFHTVMFPSTQLGTGENWTLMKTISVTEYLNYEDGKFSKSKGVGVFGNDVKDTNIPVEV 371 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPTP 380 RY+L+ D + L+ ++N +L N +GN V+R +S I K Y +IP Sbjct: 372 WRYYLLTNRPEVSDTSFSWTDLQAKLNGELLNNLGNFVNRVLSFIAKPNNAGYGSVIPD- 430 Query: 381 GAFTESDESILSVCSRV---LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 ES S+ +V + E E M+ + + L + + SE + Y + W+L Sbjct: 431 AHDAESHPLTKSLAEKVEKFVAEYVEAMEKVKLKQGLKTAMLISSEGNFYLQTSQFWKLY 490 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K + + V+ ++ LA LL+ F+P + ++F L Sbjct: 491 KEDKPLCAIVIRTAAGLVHLLAQLLEPFMPSFSCEVFKQL 530 >gi|156364627|ref|XP_001626448.1| predicted protein [Nematostella vectensis] gi|156213324|gb|EDO34348.1| predicted protein [Nematostella vectensis] Length = 646 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 130/548 (23%), Positives = 242/548 (44%), Gaps = 47/548 (8%) Query: 2 KEREK-LYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIA 59 KE EK + I++A+ Y N PH+G+ +++ DV AR+ R+ G + L+ +GTDE+G Sbjct: 3 KEGEKNILITSALPYVNNVPHLGNIIGCVLSGDVFARYCRIRGFNTLYISGTDEYGTATE 62 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A G+T + D+ + + D +I +D F RTT + + ++ K+ + + Sbjct: 63 TKALEEGLTPQQVCDKYHKLHCSVYDWFNIQFDFFGRTTTENQTKIAQDIFWKLHQQNHL 122 Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171 + + + D V Y+ A G +A + E + ++ Sbjct: 123 VEDTVEQLQCTGCQRFLADRFVEGICPFCNYEDARGDQCDACGKLINATELKSPKCKVCG 182 Query: 172 YQDK-------LLSYYESHPEFILPI------ERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + L+ ES + R S+++ GLK ++R WG Sbjct: 183 GTPEKKTSRHLFLNLTESSQDISCTSPGNWSPNARQITRSWIQEGLKPRCITRD-LKWGT 241 Query: 219 KIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDILRF 270 +P + + YVW DA YL+ T Y D + K+W V + KD + F Sbjct: 242 PVPLEGYTDKVFYVWFDAPIGYLSITANYTDQWE----KWWKNPKQVTLYQFMAKDNVPF 297 Query: 271 HAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRY 327 H + +P+ L+ AN L + + ++ ++ +K SKS G V + D R+ Sbjct: 298 HTVVFPSTLIGANDNYTLLNNISATEYLNYEDDKFSKSRGVGVFGDNAADSGIPADIWRF 357 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 +L+ G+D + + N++L N +GN ++R++ + ++ G IP E D Sbjct: 358 YLLYMRPEGQDSAFSWSDFAIKNNSELLNNLGNFINRALMFLQNNFAGKIPDLELMDE-D 416 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RA 444 + +++ +R L+ ENM + L V+++ ++Y A KPW L K + RA Sbjct: 417 TNFIALVNRELKVYYENMDKLRLREGLKVVLNISKYGNQYVQANKPWVLVKGSDAERCRA 476 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC---FQSLDQRLKPGFMLHK 501 TV+ + + L++L+ ++P ++ +I L V + C + LKPG ++ Sbjct: 477 GTVIGLACNLSFMLSLLIHPYMPTVSKEIQTQLKVRAQEDCGILTEHFVPFLKPGHVIG- 535 Query: 502 TFDPIFPR 509 T P+F + Sbjct: 536 TPKPLFQK 543 >gi|326777757|ref|ZP_08237022.1| methionyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] gi|326658090|gb|EGE42936.1| methionyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] Length = 574 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 130/529 (24%), Positives = 230/529 (43%), Gaps = 47/529 (8%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 +++A+ Y N H+G+ M+ ADV +R+ R G DVL+ TDEHG AA+ AG+ Sbjct: 6 VTSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHDVLYICATDEHGTPAELAAKEAGL 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + F Q + + D ++++D F R++ +++ + + +K+ + G I + Sbjct: 66 SVAEFCAQAHDAQKAVYDGFELAFDYFGRSSSQQNVEITQHFARKLHENGFIEERAIRQV 125 Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL-LSYYE 181 YS D + D V + G D + N + ++ SA L E Sbjct: 126 YSPVDGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLIDPRSAISGSTDLEVRE 185 Query: 182 SHPEFILPIERRNEVISFVKS-------------------GLKDLSLSRKTFDWGIKIPD 222 + F+L + ++EV ++ + GL D +++R DWG+ +P Sbjct: 186 TKHLFLLQSKLQHEVEEWIATVSAEWPHLSTSIARKWLTEGLNDRAVTRD-LDWGVPVPA 244 Query: 223 D--PQY-----IMYVWIDALTNYLTTTG-YLD-NPDGS----KAKFWPAD-----LHVIG 264 D P+ + YVW DA Y+ T + D + DG K+ ++ AD + Sbjct: 245 DTWPELAAEGKVFYVWFDAPIEYIAATKEWADASADGESRDWKSWWYEADDTVRYTQFMA 304 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEEVGV 322 KD + FH + +PA L P K GF + G K S S + +E + Sbjct: 305 KDNVPFHTVMFPATELGVREPWKKVDVVKGFNWLTFYGGKFSTSQKRGVFTDAALEILPG 364 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D RYFL+ D + + VN DLA+ +GN V+R +S K + +P Sbjct: 365 DYWRYFLIANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFGDEVPAGRV 424 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 E++ + +R+L E E M+ +A A + +L S + Y + + PW KT+ D Sbjct: 425 AGEAEAKLGEEIARLLGEYEEQMEALQFRKAAAALRALWSAGNSYLEEKAPWLEIKTDAD 484 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491 A+ L + +I A++ + F+P A + + + + + +Q Sbjct: 485 GAALTLRTAMNLIHLYAVVSEPFIPASAAAMRGAFALESDTATWVTAEQ 533 >gi|320537817|ref|ZP_08037738.1| methionyl-tRNA synthetase [Treponema phagedenis F0421] gi|320145356|gb|EFW37051.1| methionyl-tRNA synthetase [Treponema phagedenis F0421] Length = 774 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 122/516 (23%), Positives = 221/516 (42%), Gaps = 47/516 (9%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I++A+ Y N PH+G+ +++ ADV ARF RL G L+ GTDE+G A G T Sbjct: 6 ITSALPYVNNIPHLGNLLQVLSADVFARFCRLKGYKTLYICGTDEYGTATETKALQEGKT 65 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D D+ + +I++D F RT+ + + + ++ + G I + Y Sbjct: 66 PQQLCDYYHAIHSDIYNWFNIAFDYFGRTSTPQQTEITQQIFLDLEKNGFITEHEMQQLY 125 Query: 129 SLRDEAYYNDDEV--------YKGADG-------------QYYNAQHNPVQWMEEEGYFF 167 + + D V Y+ A G + N Q E Sbjct: 126 CPQCRRFLADRYVRGTCPHCSYEDARGDQCEQCGKLLDPTELKNPQCATCGGTPEPQTTK 185 Query: 168 RLSAYQDKLLSYYES-HPEFILPIERRNEVI----SFVKSGLKDLSLSRKTFDWGIKIPD 222 L ++S Y+ E E N + S+++ GL++ +++R WGI +P Sbjct: 186 HLYINLPAIISQYQPWMEEASKNGEWSNNALQMTKSWIRDGLQERAITRD-LQWGIPVPK 244 Query: 223 D--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAIY 274 + + YVW DA Y++ T + G K W D IGKD + FH + Sbjct: 245 AGYEKKVFYVWFDAPIGYISITKSFTDITGGDWKSWWLDQKDVELFQFIGKDNIPFHTVI 304 Query: 275 WPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVR 331 +P L+ + K + S ++ ++ K SKS G + + E + D R++L Sbjct: 305 FPCSLIGSGQNWTKLFHMSSTEYLNYESGKFSKSKGVGVFGSDAKESGIPADMWRFYLFY 364 Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 D + ++RVN++L NLV+R+ S I + Y+G IP T+S + + Sbjct: 365 NRPEKNDTQFTWKDFQERVNSELIGNFCNLVNRTFSFISRYYNGCIPEVDG-TQSSRADV 423 Query: 392 SVCSRVLQEIRENMQNQL--------IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 + + L++ E+ + + + Q+ L S ++ F +PW+ + +P++ Sbjct: 424 AEPIKQLRKAVESYKKSITDLMDWANLRDGFHQIFELSSIANKAFQDGEPWKNRDADPEK 483 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +L I+ L IL+ +F+P+ A++ L + Sbjct: 484 TEALLSELCYFIKDLLILIHSFMPEYASQAASFLGI 519 >gi|114331896|ref|YP_748118.1| methionyl-tRNA synthetase [Nitrosomonas eutropha C91] gi|122313375|sp|Q0AES9|SYM_NITEC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|114308910|gb|ABI60153.1| methionyl-tRNA synthetase [Nitrosomonas eutropha C91] Length = 701 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 126/514 (24%), Positives = 215/514 (41%), Gaps = 54/514 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + +++A+ Y N H+GH E I D+ RF ++ G V + D HG I A+ G Sbjct: 6 ILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGHTVYYVCADDAHGTPIMLRAEREG 65 Query: 67 VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI----LWKKISDKGDIYK 121 ++ + + + + + RD I++D + T H D R +++K+ G I Sbjct: 66 ISPEALIARVYTEHLRDFTG-FHIAFDQYYST----HSDETRYYAEDIYQKLKAAGLIAI 120 Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------- 161 Y + D V GA QY A + P + Sbjct: 121 RSIEQLYDPVKNLFLPDRFVKGECPKCGAVDQYGDSCEACGAAYTPTELKNPYSAISGAT 180 Query: 162 -----EEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210 E +FF+LS D L + S L +E N++ ++ ++ L D +S Sbjct: 181 PIRKASEHFFFKLSDPRCSDFLRKWTRSGNH--LQVEAANKMAEWLGEEGENKLSDWDIS 238 Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADL-----HVIG 264 R +G +IP + YVW+DA Y+ + L G ++W H IG Sbjct: 239 RDAPYFGFEIPGETDKYFYVWLDAPIGYMGSFKKLCTEQGIDFDQYWKKGATTELYHFIG 298 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 KDIL FHA++WPA L +A P ++F+HGF+ GEK+SKS G I +++ + + Sbjct: 299 KDILYFHALFWPAMLENAGYRTPTQIFAHGFLTVNGEKMSKSRGTFITAESYLQQRLNPE 358 Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 LRY+ ++ +D + + RVNADL N+ SR I K +DG + Sbjct: 359 WLRYYYAAKLNGSMEDIDLNLEDFVTRVNADLVGKYINIASRCAGFISKCFDGKLVAGED 418 Query: 383 FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--T 439 + +++ S + E + + A+ ++ EV+ PWE+ K T Sbjct: 419 YQLLQQTVDEYFSSWQPGVIEAAYEARDFSAAIRHIMKRTDEVNELIHVLAPWEIAKDET 478 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + +++ L+ L+ +P A +I Sbjct: 479 RERELHRACSLGIQMFYLLSCYLKPVLPYTAERI 512 >gi|328675609|gb|AEB28284.1| Methionyl-tRNA synthetase [Francisella cf. novicida 3523] Length = 619 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 114/460 (24%), Positives = 208/460 (45%), Gaps = 49/460 (10%) Query: 62 AQNAGVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A++ G+T + V + S N RD AD +I++D++ T + + ++ K+++K I Sbjct: 4 AKSLGITPEELVAKYSNNHQRDFAD-FEINFDNYHSTHNTLNKEIVEDIYSKLNNKNLIS 62 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------- 161 K + Y + + D V KG A+ QY A ++P + + Sbjct: 63 KKAIAQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPKSVVSG 121 Query: 162 -------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E +FF L A + + + ES+ +L E N++ + + GL+ +SR Sbjct: 122 KTPIQKNSEHFFFDLPALEKNIKDWIESNK--LLQPEVANKLAEWFEQGLQSWDISRDAP 179 Query: 215 DWGIKIPD-DPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW-----PADL-HVIGKD 266 +G IPD + Q YVW+DA Y+ + Y + + + FW ++L H IGKD Sbjct: 180 YFGFAIPDTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFDDFWGDSSSESELYHFIGKD 239 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L S P +F++GF+ G+K+SKS G I + + LR Sbjct: 240 IIYFHALFWPAILSSTGYKTPTSIFANGFLTVNGKKMSKSRGTFIQARTYLNNLKPSYLR 299 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ + D + + + N+D+ + N+ SR I K +DG + Sbjct: 300 YYFASRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIHKKFDGTLSN----EI 355 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443 D + S S+ I + + + +A+ ++SL + +++ D KPW+L K + Sbjct: 356 FDPKLESEFSKNHNSITQAFEKREFAQAVRLIMSLADKANQFIDYHKPWQLAKEEGQEQK 415 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480 V + + + L L+ +P + A + +I F++ Sbjct: 416 VHQVCSQGINMFKVLVNYLKPIIPSIVAEAERFLNIEFIS 455 >gi|147905173|ref|NP_001079984.1| methionyl-tRNA synthetase, cytoplasmic [Xenopus laevis] gi|82187134|sp|Q6PF21|SYMC_XENLA RecName: Full=Methionyl-tRNA synthetase, cytoplasmic; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|34785909|gb|AAH57757.1| MGC69150 protein [Xenopus laevis] Length = 905 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 132/549 (24%), Positives = 243/549 (44%), Gaps = 76/549 (13%) Query: 3 EREK-LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 E EK + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G Sbjct: 259 EGEKNVLITSALPYVNNVPHLGNIIGSVLSADVFARYCRLRNWNTLYICGTDEYGTATET 318 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A G+T + D+ + + +IS+D F RTT + + ++ ++ ++ + Sbjct: 319 KAMEEGLTPQQICDKYNAIHTAIYQWFNISFDYFGRTTTQHQTTISQDIFHRLLEREFLL 378 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG------------------QYYNAQH 154 + + + D V Y+ A G Q + Sbjct: 379 TDTVEQLRCEKCQRFLADRFVEGICPFCNYEEARGDQCDKCGKLINAVELKKPQCKICKQ 438 Query: 155 NPVQWMEEEGYFF--------RLSAYQDKLLSY--YESHPEFILPIERRNEVISFVKSGL 204 +PV ++ + F RL + ++ S + S+ FI S+++ GL Sbjct: 439 SPV--IKSSKHLFLDLPKLEKRLEQWLEQSFSTGDWTSNARFI--------TRSWIRDGL 488 Query: 205 KDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLH 261 K ++R WG +P D + YVW DA Y++ T Y D + K+W + Sbjct: 489 KPRCITRD-LKWGTPVPLDGFRDKVFYVWFDAPIGYISITANYTDQWE----KWWKSPQQ 543 Query: 262 V-----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDP 313 V + KD + FH++ +P+ LL A N L + + ++ ++ K SKS G V Sbjct: 544 VQLYNFMAKDNVPFHSVVFPSCLLGAEDNYTLVNHLVATEYLNYEDGKFSKSRGVGVFGD 603 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 + + D R++L+ G+D + L + N++L N +GN V+R+ + K + Sbjct: 604 MAKDTGIPADIWRFYLLYVRPEGQDSAFSWSDLMLKNNSELLNNLGNFVNRAGMFVQKFF 663 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 +G +P +E D+ +L+ + LQ+ ++ I AL ++++ ++Y +P Sbjct: 664 NGCVPEMELLSE-DKRLLAQVAAELQQYNLLLEKVRIRDALRCILNISRHGNQYIQVNEP 722 Query: 434 WELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR------ 484 W+ K N RA TV V V + L+I+L ++P +++ I + L + E++ Sbjct: 723 WKCIKGNQQEQKRAGTVTGVAVNMAALLSIMLHPYMPTISSVIQEQLLMPQESKVLTTDF 782 Query: 485 --CFQSLDQ 491 C QS Q Sbjct: 783 CCCLQSGHQ 791 >gi|255560103|ref|XP_002521069.1| methionine-tRNA synthetase, putative [Ricinus communis] gi|223539638|gb|EEF41220.1| methionine-tRNA synthetase, putative [Ricinus communis] Length = 617 Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 128/530 (24%), Positives = 230/530 (43%), Gaps = 66/530 (12%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + + I++A+ Y N PH+G ++ DV AR+ RL G +VL+ GTDE+G A Sbjct: 26 KRNVLITSALPYVNNVPHLG----VLNGDVFARYCRLRGHNVLYICGTDEYGTATETKAM 81 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 T + D+ +++ D DIS+D+F RT+ + + C+ ++KK+ + + + Sbjct: 82 EENCTPQEICDKYHAIHKEVYDWFDISFDEFGRTSTPQQTEICQAIFKKLMENNWLSENI 141 Query: 124 YSGWYSLRDEAYYNDDEVYK-----GAD------------GQYYN-----------AQHN 155 Y E + D V G D G++ N Q Sbjct: 142 MQQLYCDTCERFLADRFVEGTCPTLGCDYDSARGDQCEKCGKFLNPTELINPRCKVCQTT 201 Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI----SFVKSGLKDLSLSR 211 P + + F L +D L SY E + I ++++ GLK ++R Sbjct: 202 P-RTRDTNNLFLELPLLKDNLQSYIS---EMSVTGSWSQNAIQTTHAWLRDGLKPRCITR 257 Query: 212 KTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKD 266 WG+ +P + + YVW DA Y++ T PD K P ++ + +GKD Sbjct: 258 D-LKWGVPVPLEKFKDKVFYVWFDAPIGYISITSCY-TPDWEKWWKNPENVELYQFMGKD 315 Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324 + FH + +P+ L+ N L K + ++ ++ K SKS G + V DA Sbjct: 316 NVPFHTVMFPSTLIGTRENWTLMKNISVTEYLNYESGKFSKSKG-----VGVFGNDARDA 370 Query: 325 ------LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL----KDYD 374 RY+L+ D + + + ++N +L + +GN + R +S I K Y Sbjct: 371 HHPAEVWRYYLLANRPEISDTIFTWEDFQAKLNNELIHNLGNFIHRVLSFIANTSGKGYG 430 Query: 375 GMIP-TPGAFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 +IP PGA + ++ + ++ E + M + + L +S+ + Y A + Sbjct: 431 TVIPDAPGAESHPLTIKFAIDVTNLVDEYVKAMDQVKLKQGLKCAMSISGAGNTYLQASQ 490 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + L + + S V+ +V V+ LA LL+ F+P ++K+F +L + E Sbjct: 491 YFRLYEEDQASCSIVVRTSVGVVCILARLLEPFMPSFSHKVFKLLKLPPE 540 >gi|167043416|gb|ABZ08118.1| putative tRNA binding domain protein [uncultured marine microorganism HF4000_APKG1C9] Length = 729 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 145/558 (25%), Positives = 232/558 (41%), Gaps = 99/558 (17%) Query: 12 AIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK 70 A Y N H+GH A + AD+ R+ R G VL +G+DEHG I A+ G + Sbjct: 2 AWPYANGPLHLGHVAGNCLPADIQFRYERARGRRVLMCSGSDEHGTPITLTAEEEGAHPQ 61 Query: 71 VFVDQ----NSRNFRDMADVLDISYDD---------FIRTTEKRHHDTCR-----ILWKK 112 VD N + DM + D + RT++ RH + R +L K Sbjct: 62 EIVDHFHQINKKALIDMGCSWAMDVDPRGPEYGGALYNRTSDPRHKELVRDLFTLMLEAK 121 Query: 113 ISDKGDIYKGCY---SGWYSLRDEAYYNDDE---VYKGADGQY-------YNAQH--NPV 157 + ++ + + C G + Y D + GA G Y NP+ Sbjct: 122 MLERKTMQQYCSVSKDGSIRFLPDRYVEGDCPVCSFSGARGDQCDDCGATYETHELINPI 181 Query: 158 QWMEEEG---------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208 ++ + FFRL +QD L S+Y E P R+ +++ GL+ + Sbjct: 182 SKLDADANIEVRNTDHLFFRLDLFQDSLNSHYLERKEVWKP-NVRSMTKNWLDMGLRPRA 240 Query: 209 LSRKTFDWGIKIP----DDPQYIMYVWIDALTNYLTTT--------GYLDNPDGSKA--K 254 ++R DWGI++P + +YVW +A+ Y T +PDG A Sbjct: 241 VTRD-IDWGIELPLSGSEWDSKRVYVWFEAVQGYYTCARIWAERFADEAGHPDGVDAWRN 299 Query: 255 FW--------PADLHVIGKDILRFHAIYWPAFLLSAN----------LPLPK------KV 290 +W P L+ +GKD + FH I WPA L+ N PLP V Sbjct: 300 WWTVSGDGYVPKHLYFMGKDNIPFHTIIWPAILMGINSAQSGNPVSHTPLPNDLVLEANV 359 Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350 ++ +++ +G + SKS + I +E D LRY+L + G D + D RV Sbjct: 360 PANQYLMLQGGQFSKSRKHAIWLPSFLERFDPDTLRYYLSINMPEGHDTDFRWDEFVDRV 419 Query: 351 NADLANGIGNLVSR--SVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRE 403 N +L N V R ++S L D DG P +P TE+ S+ SR L++ Sbjct: 420 NNELIGTYANFVHRVMTLSHRLSD-DGSNPLSDFDSPDEHTEAQ----SIISRHLEDAIH 474 Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPW---ELKKTNPDRAS-TVLYVTVEVIRQLA 459 +M+ Q AL ++++ + PW + T R S + L T + R LA Sbjct: 475 SMERQRFKEALRCIMNIAQLGNSILQEAAPWKHLDGDDTPEARKSLSSLAFTWRMCRGLA 534 Query: 460 ILLQAFVPKLANKIFDIL 477 + L+ F+P +++++ +L Sbjct: 535 VTLRPFIPYQSDRLWAML 552 >gi|187918449|ref|YP_001884012.1| methionyl-tRNA synthetase [Borrelia hermsii DAH] gi|226710894|sp|B2S0T6|SYM_BORHD RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|119861297|gb|AAX17092.1| methionyl-tRNA synthetase [Borrelia hermsii DAH] Length = 729 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 119/515 (23%), Positives = 223/515 (43%), Gaps = 63/515 (12%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++K I+ A+ Y N PH+G+ +++ AD AR+ R+ G++ L+ GTDE+G A Sbjct: 2 KKKNLITAALPYVNNIPHLGNLVQVLSADAFARYSRMMGIETLYVCGTDEYGTATETKAL 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 T + ++ + + + +I +D F RTT KRH +T + L+ K+ G + Sbjct: 62 IEKTTPEELCNKYYEIHKSIYEWFNIKFDIFGRTTNKRHKETVQDLFLKLEKNGYTTEKE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE--------------------- 162 ++ +D+ + D V NA+ + + + Sbjct: 122 SEQFFCKQDQMFLADRYVTGECPNCGNNAKGDQCENCSKLLSPTDLINPKCIICKNIPII 181 Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI----SFVKSGLKDLSLSRKTFD 215 + + L +D+L S++ E L I +F++ GLK+ +++R Sbjct: 182 KTTKHIYIDLPKIKDEL-SHWMQITE--LNTNWNTNAIKITNAFLRDGLKERAITRD-LK 237 Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268 WGI +P + YVW DA Y++ T + S +W + + IGKD + Sbjct: 238 WGIPVPKKEYENKVFYVWFDAPIGYISITKEISKDWES---WWKNNEETNLVQFIGKDNI 294 Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325 FH + +P+ L + N + K+ S ++ ++ K SKS G I +VI + D Sbjct: 295 LFHTVIFPSIALGSKENWTMLSKLASSEYLNYENLKFSKSAGTGIFGNDVITTGIPSDIW 354 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 R+++ D + D +RVN++L NLV+R ++ K + I Sbjct: 355 RFYIYYNRPEKSDFQFMWDDFMERVNSELIGNFSNLVNRVLTFYKKFFGDQIDK------ 408 Query: 386 SDESILSVCSRVLQEIRENMQNQL-------IHRALAQVISLVSEVDRYFDAQKPWELKK 438 + + QEI L + AL +++ + ++ F ++PW+ K Sbjct: 409 -----IEIKEDFWQEINLKYDKTLNFFKQVELKSALKEILDISRTGNKIFQDKEPWKTKD 463 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + P + +L + +IR L+IL+ F+P ++KI Sbjct: 464 STPQKTKELLLNLIYLIRDLSILISPFIPHTSDKI 498 >gi|89055636|ref|YP_511087.1| methionyl-tRNA synthetase [Jannaschia sp. CCS1] gi|123401013|sp|Q28MK0|SYM_JANSC RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|88865185|gb|ABD56062.1| methionyl-tRNA synthetase [Jannaschia sp. CCS1] Length = 570 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 120/522 (22%), Positives = 220/522 (42%), Gaps = 53/522 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M + I++AI Y N H+G+ + AD+ AR+ R G +VLF TDEHG Sbjct: 1 MSTTSRTLITSAIPYINGIKHLGNLVGSQLPADLYARYLRARGQEVLFLCATDEHGTPAE 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 AA AG + ++A +S+D F R++ ++H + K++D G I Sbjct: 61 LAAAKAGKPVAEYCADMHAVQAEIARGFRLSFDHFGRSSSPQNHALTQHFAGKLADAGLI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM-------- 160 + YS D + D + +G + Q +P + Sbjct: 121 AEVEEKQVYSHADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLINPRSAISG 180 Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--LKDLSLSR 211 E + + R S + +L + S ++ PI + ++ G L+D ++R Sbjct: 181 STDLEVRETKHLYLRQSQLRGQLSDWISSKTDW--PILTTSIAKKWLNDGDGLQDRGITR 238 Query: 212 KTFDWGIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-- 259 DWG+ + P + YVW DA Y+ +GS + ++W D Sbjct: 239 D-LDWGVPVKRGDADWPGMEGKVFYVWFDAPIEYIACAAEAVE-EGSISDWERWWRVDKG 296 Query: 260 ------LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVI 311 + +GKD + FH + +PA +L + P L + S ++ + G + S S G + Sbjct: 297 ADDVRYVQFMGKDNVPFHTLSFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSQGRGV 356 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 + +E + D R++L+ D + + ++ VN DLA+ +GN VSR Sbjct: 357 FMDQALEILPSDYWRWWLLSHAPETSDAEFTWEAFQQDVNKDLADVLGNFVSRITKFCRS 416 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 + ++P G + + ++++ + L + +M I +A A++ ++ + Y + Sbjct: 417 KFGEVVPEGGDYGPQETALIADLDKRLAAYQTHMDAIDIRKAAAELRAIWVAGNEYLQSA 476 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 PW KT+PDRA+ + + +I A L F+P A + Sbjct: 477 APWTAFKTDPDRAAAITRFALNLIPFYAGLSAPFIPDAAQAM 518 >gi|110679753|ref|YP_682760.1| methionyl-tRNA synthetase [Roseobacter denitrificans OCh 114] gi|123361874|sp|Q166L9|SYM_ROSDO RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|109455869|gb|ABG32074.1| methionyl-tRNA synthetase [Roseobacter denitrificans OCh 114] Length = 572 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 116/521 (22%), Positives = 215/521 (41%), Gaps = 49/521 (9%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 E+ I++AI Y N H+G+ + AD+ AR+ R G +VLF TDEHG AA Sbjct: 2 ERHLITSAIPYINGIKHLGNLVGSQLPADLYARYLRARGHEVLFLCATDEHGTPAELAAA 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 AG + + ++A +S+D F R++ ++H + K+ + I + Sbjct: 62 KAGKPVDEYCAEMHAIQSEIAKGFRLSFDHFGRSSSAQNHRLTQHFAGKLDEANLIDEVI 121 Query: 124 YSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG-------- 164 YS D + D + +G + Q +P +E Sbjct: 122 EKQVYSHADGRFLPDRYIEGTCPNCAYDKARGDQCENCTKQLDPTDLIEPRSAISGSTDL 181 Query: 165 -------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + + S +D+L ++ +S ++ + + GL+D ++R DWG Sbjct: 182 EVRETKHLYLKQSVLKDQLDAWIDSKTDWPVLTTSIAKKWLHDGDGLRDRGITRD-LDWG 240 Query: 218 IKIPDDPQ-------YIMYVWIDALTNYLTTT---GYLDNPDGSK-AKFWPAD------- 259 I + Q + YVW DA Y+ +N + S ++W D Sbjct: 241 IPVKKGTQDWPGMEGKVFYVWFDAPIEYIACASEWAEANNLEQSDWERWWRTDKGADDVR 300 Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316 +GKD + FH + +PA LL + P + + S ++ + G + S S G I + Sbjct: 301 YTQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGIFMDQA 360 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 +E + D R++L+ D + + + VN DLA+ +GN VSR + Sbjct: 361 LELLPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNFVSRITKFCAAKFGSE 420 Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 +P GA+ ++ +L+ L ++ M + ++ ++ ++ + + Y PW + Sbjct: 421 VPAGGAYGSAELELLTKLDESLTRYQDYMGAMEVRKSAQELRAIWASGNEYLQTVAPWSV 480 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 KT+P+ A+ + + + +L FVP + KI L Sbjct: 481 FKTDPETAAMQTRLGLNLALLFGVLSSPFVPDASEKILKCL 521 >gi|148977648|ref|ZP_01814224.1| methionyl-tRNA synthetase [Vibrionales bacterium SWAT-3] gi|145963163|gb|EDK28431.1| methionyl-tRNA synthetase [Vibrionales bacterium SWAT-3] Length = 486 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 87/297 (29%), Positives = 141/297 (47%), Gaps = 18/297 (6%) Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247 L E N++ + +SGL+ +SR +G +IP + YVW+DA Y+ + L + Sbjct: 11 LQAETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYMGSFKNLCD 70 Query: 248 P--DGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300 D ++W D H IGKDI+ FH+++WPA L + P VF HG++ G Sbjct: 71 KRDDLDFNEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSGFRKPNNVFVHGYVTVNG 130 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIG 359 K+SKS G I + + + LRY+ ++ D + + +RVNAD+ N I Sbjct: 131 AKMSKSKGTFIKASTYLNHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVNADVVNKIV 190 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV--LQEIRENMQNQLIHRALAQV 417 NL SR+ I K ++G + A E ++ R+ L E RE RA+ ++ Sbjct: 191 NLASRNAGFITKRFEGKLAAEFAEPELYNEFVAAAERIGELYETRE------FSRAIREI 244 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 +L + ++Y D + PW L K V V + + R L L+ +P+LA + Sbjct: 245 TALADKANQYIDEKAPWVLAKEEGKEKELQEVSSVGINLFRVLMAYLKPVMPELAAR 301 >gi|295688954|ref|YP_003592647.1| methionyl-tRNA synthetase [Caulobacter segnis ATCC 21756] gi|295430857|gb|ADG10029.1| methionyl-tRNA synthetase [Caulobacter segnis ATCC 21756] Length = 569 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 122/516 (23%), Positives = 216/516 (41%), Gaps = 53/516 (10%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++A+ Y N H+G+ A M+ ADV ARF R G + L+ TDEHG AA Sbjct: 3 RILITSALPYINGIKHLGNLAGSMLPADVYARFQRARGHETLYICATDEHGTPAELAAAA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 A + + D+ +S+D F R++ ++H + + + D G I + Sbjct: 63 ANQDVATYCAEQHVLQHDVGRAFGLSWDHFGRSSSPQNHRLTQHFCQALEDHGLIEERVD 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN------------------PVQ 158 YS+ D+ + D V ++ A G + N ++ Sbjct: 123 QMVYSVDDKRFLPDRYVEGTCPHCGFEKARGDQCDNCGNLLDPTDLIDPYSVISGSRNIE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + + + DK+ ++ +SH ++ P R+ + GL D ++R WGI Sbjct: 183 VRDTRHLYLLQTKMADKIRAWVDSHADW--PQLARSIAYKHLDEGLIDRGITRD-LAWGI 239 Query: 219 KIPDD----PQY---IMYVWIDALTNYLTTTGYLD--NPDGSKAKFWPAD--------LH 261 + D P + + YVW DA Y+ T +PD ++W D + Sbjct: 240 PVAKDGAPRPGFEDKVFYVWFDAPIEYIAATQEWAEASPDRDWKRWWRTDAGAEDVRYVQ 299 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGNVIDPIEVI 317 +GKD + FH + +PA +L + P K F+ ++ G K S S + + Sbjct: 300 FMGKDNVAFHTVSFPATILGSEEPWKSVDMLKAFN--WLNWYGGKFSTSNKRGVFMDAAL 357 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 + + D R++L G D + + VN DLA+ +GN V+R + +DG++ Sbjct: 358 DILPPDLWRWYLTANSPEGSDTAFTWEQFASAVNRDLADVLGNFVNRILKFTESKFDGVV 417 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G +E + + S L ++ E M I ++ + +L + Y PW Sbjct: 418 PEGGQPGPLEEKLFADVSARLADLAEQMDAIEIRKSAQALRALWVVGNEYLQEAAPWTAI 477 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 KT+ DRA+ ++ + + A + F+P A KI Sbjct: 478 KTDRDRAAVIVRTALNLAALYAKISAPFIPFAAEKI 513 >gi|281207432|gb|EFA81615.1| methionyl-tRNA synthetase [Polysphondylium pallidum PN500] Length = 732 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 123/512 (24%), Positives = 225/512 (43%), Gaps = 46/512 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ +++ DV AR+ R+ G + ++ GTDE+G A Sbjct: 18 QRNILITSALPYVNNVPHLGNIIGCVLSGDVYARYCRMRGYNTIYICGTDEYGTATETKA 77 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GVT K D+ RD+ +I +D F RT+ + + ++ K+ Sbjct: 78 LQEGVTPKEICDRYHVIHRDIYKWFNIGFDKFGRTSTDSQTEIAQDIFMKLYKNELTTSE 137 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWM----------- 160 Y R + D V ++ A G Q N NP + Sbjct: 138 EIEQLYCERCNMFLADRYVEGTCPHCQFEDARGDQCDNCTKMLNPTDLIRPRCKLDSTTP 197 Query: 161 ---EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + F L Q +L + +S P + +R S+VK LK ++R W Sbjct: 198 VLKSTKHIFLSLPKIQQRLDDFVTQSSPIWSENSQRITN--SWVKGELKSRCITRD-LKW 254 Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFW--PADLHVI---GKDIL 268 G +P + + + YVW DA YL+ T Y + + ++W P ++ ++ GKD + Sbjct: 255 GTPVPLEEFKEKVFYVWFDAPIGYLSITKEYTEQWE----QWWKNPKNVELVQFMGKDNV 310 Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGN-VIDPIEVIEEVGVDAL 325 FH + +P+ L+ + L + + ++ ++ K SKS V + V D Sbjct: 311 PFHTVIFPSSLIGSGDQYTLLHNLSTTEYLNYESGKFSKSRNTGVFGDNAMGTGVPADIW 370 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 RY+L+ D + + N +L + GNLV+R + + D +G+IP + Sbjct: 371 RYYLLSNRPEKIDSTFSWADFGLKTNTELLSNFGNLVNRVLKQVSSDLNGVIPKI-ELND 429 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 D ++ ++ E ++++ I L +S+ ++Y + KPWELK+ +P R Sbjct: 430 EDRQFIADVDKLYIEYLNDLEHVHIKDGLRTAMSMSKLGNQYMQSNKPWELKEKDPLRFG 489 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 T+L V V I+ LA + + ++P++ K+ + L Sbjct: 490 TILTVLVNTIKLLATVFEPYLPEITAKVHEQL 521 >gi|297158890|gb|ADI08602.1| methionyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1] Length = 589 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 130/524 (24%), Positives = 221/524 (42%), Gaps = 55/524 (10%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N H+G+ M+ ADV AR+ R G DVL+ TDEHG AA+ AG+ Sbjct: 6 ITSALPYINGIKHLGNMVGSMLPADVYARYMRQRGHDVLYICATDEHGTPAELAAKEAGL 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 F Q + + D +++D F R++ ++ + + + +++ G I + Sbjct: 66 PVGEFCAQQHHAQKAVYDGFSLAFDYFGRSSSAQNVEITQTIARELKANGFIEERSIRQV 125 Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP---------VQWME 161 YS D + D + Y A G Q N NP ++ E Sbjct: 126 YSNADGRFLPDRYIEGTCPHCGYDKARGDQCENCTRVLDPTDLINPRSAISGSSDLEVRE 185 Query: 162 EEGYFFRLSAYQDKLLSYYESH----PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + F S ++ ++ + H P I R+ ++ GL+D +++R DWG Sbjct: 186 TKHLFLLQSKLAGEVAAWVDEHGKDWPTLASSIARK-----WLNEGLQDRAITRD-LDWG 239 Query: 218 IKIPDDP-------QYIMYVWIDALTNYLTTTGYLD--NPDGSKAKFWPADL-------H 261 + +P D + YVW DA Y+ T +P K W D+ Sbjct: 240 VPVPADTWPDLAAEGKVFYVWFDAPIEYIGATKEWSDLDPANRDWKSWWYDVDQTVRYTE 299 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEE 319 + KD + FH + +PA LL K + F + + G K S S + +E Sbjct: 300 FMAKDNVPFHTVMFPATLLGTRDAWKKVDYVKAFNWLTYYGGKFSTSQKRGVFTDAALEL 359 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 + D RYFL+ D + + VN DLA+ +GN V+R +S K + +P Sbjct: 360 LPADYWRYFLMANAPESDDTSFTWEHFAATVNKDLADTLGNFVNRVLSFSRKRFGDEVPA 419 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 A E++ + +R+L E E M +A A + +L S + Y + + PW KT Sbjct: 420 GKAAGEAEARLGEEIARLLAEYEEYMDALQFRKAAAALRALWSAGNSYLEEKAPWLEIKT 479 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 + + A+ L + +I A++ + F+P A + +AD+ Sbjct: 480 DQEGAALTLRTAMNLIHLYAVVSEPFIPASARAMRSAFALADDT 523 >gi|255513959|gb|EET90224.1| methionyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 552 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 131/523 (25%), Positives = 230/523 (43%), Gaps = 65/523 (12%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M + +K +++A+ Y A PH+G+ I+ ADV ++ ++ G D +F G+D+HG I Sbjct: 1 MNKTQKFIVTSALPYAEAVPHLGNFVGSILPADVYFKYLKMKGEDAIFICGSDQHGTPIE 60 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A AG+T ++ + + + ++ + +T + + T +++ + G I Sbjct: 61 LKAIKAGITPDRLSNEVHEKIKKVMERSGCTFTYYGKTHSESNKLTVYEIFESLRKNGYI 120 Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWME------- 161 + + Y D+ + +D + Y A G Q N H +P + +E Sbjct: 121 IETEDTQAYCSVDDRFLSDRFIIGTCPYCGYSDARGDQCENCGHLLSPQELIEPYCAVCG 180 Query: 162 EEGYFFR--------LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + FR L A ++ ++ ESH N+ +S+++ GLK ++R Sbjct: 181 NKKLEFRKTKNLALDLEALSGEIKAFVESHKHNNWTKNAINKTLSYLEQGLKPRDITR-N 239 Query: 214 FDWGIKIP----DDPQYIMYVWIDALTNYLTTT---------GYLDNPDGSKAKFWPADL 260 WG +P +D + YVW DA+ Y+ T Y +PD +F Sbjct: 240 IKWGFPVPLKGFEDKAF--YVWFDAVIGYIGITREWSESQYLNYWKDPDTKLIQF----- 292 Query: 261 HVIGKDILRFHAIYWPAFLLSAN----LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316 +GKD L FH + WP L+ A LP KVF ++ KG K SKS G ++ Sbjct: 293 --MGKDNLEFHTMMWPGILIGAGREYVLPHTIKVFE--YLNAKGVKFSKSKGVGLNMEGA 348 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 +E + D R+ L+ + D + + + VN + + IGNLV+R V I G+ Sbjct: 349 VELLPSDYWRFALMYLLPETSDTDFSIEEFIEIVNKVMNDKIGNLVNR-VLTIYGANRGI 407 Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 I + E D + +S ++ E + AL +VI L + + +PW+L Sbjct: 408 I----SGEEDDAASISKARSIISEYIAEFDAINMRNALHKVIELSELGNEVMSSTEPWKL 463 Query: 437 KK---TNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFD 475 K N R + + V++ +++ L I+L F P A+KI D Sbjct: 464 AKAGDANSKREFSKIMVSLRQIVYDLGIMLWPFAPDAASKILD 506 >gi|222873808|gb|EEF10939.1| predicted protein [Populus trichocarpa] Length = 289 Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 56/103 (54%), Positives = 74/103 (71%) Query: 39 RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98 R DG DV+F TGTDEHG K+ + A+ G+T D+N+ F+ MA +L+ S DDFIRTT Sbjct: 186 RCDGKDVMFLTGTDEHGIKMLQTARKEGITAGELADRNAPEFQRMAKLLNASNDDFIRTT 245 Query: 99 EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 E+RH + +WK ++D+GDIY G YSGWYS+RDEAYY +DE Sbjct: 246 EERHRTASQAIWKAMADRGDIYLGGYSGWYSVRDEAYYGEDET 288 >gi|221119548|ref|XP_002161815.1| PREDICTED: similar to MGC69150 protein [Hydra magnipapillata] Length = 1410 Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 122/514 (23%), Positives = 235/514 (45%), Gaps = 49/514 (9%) Query: 2 KEREK-LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 K+ EK + I++A+ Y N PH+G+ + ADV AR+ RL L+VL+ GTDE+G Sbjct: 757 KDGEKNILITSALPYVNNVPHLGNIIGCTLSADVYARYCRLRNLNVLYICGTDEYGTATE 816 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G+T + D+ ++ ++ +I +D F RTT + + ++ KI + G + Sbjct: 817 TKAFSEGLTPQQICDKYNKIHSEIYTWFNIEFDCFGRTTTEHQTKITQDIFWKIENNGYL 876 Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------- 161 K + E + D V Y+ A G +A + E Sbjct: 877 CKDAVDQLKCEQCERFLADRFVEGICPFCSYEDARGDQCDACGKLINATELKKPRCKQCG 936 Query: 162 -------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + F L + L + + + +N ++ GLK ++R Sbjct: 937 SSPVIKSSDHIFLDLPKIEPMLKDWIMKSEKANWTVNAKNITRGWIAEGLKPRCITRD-L 995 Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHVI---GKD 266 WG +P + + YVW DA Y++ T Y D + K+W P + ++ KD Sbjct: 996 KWGTPVPMEGYTDKVFYVWFDAPIGYISITANYTDQWE----KWWKNPEQVTLVQFMAKD 1051 Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV-- 322 + FH + +P+ LL+A N + ++ + ++ ++ +K SKS G + + E G+ Sbjct: 1052 NVPFHTVVFPSSLLAAKDNYTILNEISATEYLNYENDKFSKSRGVGVFG-DHAESTGIPA 1110 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R++L+ +D F+ D + N++L N +GN V+R++ + ++ +P Sbjct: 1111 DMFRFYLLYIRPESQDSFFQWDDFITKNNSELLNNLGNFVNRALMFLKNSFNSTLPNLQL 1170 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 E D +++ +R L + E++ + L ++++ ++Y A KPW L K + Sbjct: 1171 QCE-DYKLIAGINRDLHQYIEHLDAIKLKDGLRCILNMSRLGNQYMQAHKPWVLIKGDEQ 1229 Query: 443 ---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 RA+TV+ + V V +A+L+ ++P ++ ++ Sbjct: 1230 EQMRAATVVGLAVNVSALIAVLILPYMPLVSKQL 1263 >gi|167645711|ref|YP_001683374.1| methionyl-tRNA synthetase [Caulobacter sp. K31] gi|189083257|sp|B0T3J0|SYM_CAUSK RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|167348141|gb|ABZ70876.1| methionyl-tRNA synthetase [Caulobacter sp. K31] Length = 569 Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 126/516 (24%), Positives = 217/516 (42%), Gaps = 53/516 (10%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++A+ Y N H+G+ A M+ ADV ARF R G D L+ TDEHG AA Sbjct: 3 RILITSALPYINGVKHLGNLAGSMLPADVYARFQRARGNDTLYICATDEHGTPAELAAAA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + + D+ +S+D F R++ ++H + + + ++G I + Sbjct: 63 AGQDVAEYCAEQHVLQHDVGRAFGLSWDHFGRSSSPQNHRLTQHFCEVLEERGLIEERVD 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ--- 173 YS+ D + D + + A G + N + E + + +S + Sbjct: 123 QMVYSIDDARFLPDRYIEGTCPHCGFDKARGDQCDNCGNLLDPTELKDPYSVISGSRNLE 182 Query: 174 ---------------DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 DK+ ++ +SHP++ L ++ + GL D ++R WGI Sbjct: 183 VRDTRHLYLLQTKMADKIRAWIDSHPDWQLLA--KSIAYKHLDEGLIDRGITRD-LAWGI 239 Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFW-----PAD----LH 261 + P + YVW DA Y+ T + D G K W AD + Sbjct: 240 PVTKGEFPRPGFEDKVFYVWFDAPIEYIAATQEWADEGAGRDWKSWWRTDEGADDVRYVQ 299 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGNVIDPIEVI 317 +GKD + FH + +PA +L + P K F+ ++ G K S S + + Sbjct: 300 FMGKDNVAFHTVSFPATILGSQEPWKSVDMLKAFN--WLNWYGGKFSTSNKRGVFMDAAL 357 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E + D R++L D + + VN DLA+ +GN V+R + +DG+I Sbjct: 358 EILPPDFWRWYLTSNAPESSDTAFTWEQFASAVNRDLADVLGNFVNRILKFTEGKFDGVI 417 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P GA +E + + S L ++ E M + ++ + +L + Y PW Sbjct: 418 PDGGAPGPLEEKLYADVSARLADLTEQMDAVEVRKSAQALRALWVVGNEYLQEAAPWTAI 477 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 KT+ DRA+ ++ + + A + F+P A KI Sbjct: 478 KTDRDRAAVIVRTALNLAALYARISAPFIPFAAEKI 513 >gi|148692550|gb|EDL24497.1| methionine-tRNA synthetase, isoform CRA_a [Mus musculus] Length = 856 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 123/512 (24%), Positives = 227/512 (44%), Gaps = 48/512 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ER L I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G Sbjct: 268 ERNVL-ITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRQWNTLYLCGTDEYGTATETK 326 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A G+T + D+ D+ IS+D F RTT + + +++++ +G + + Sbjct: 327 AMEEGLTPREICDKYHAIHADIYRWFGISFDTFGRTTTPQQTKITQDIFQRLLTRGFVLR 386 Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME------------ 161 R + D V Y+ A G + + +E Sbjct: 387 DTVEQLRCERCARFLADRFVEGVCPFCGYEEARGDQCDRCGKLINAIELKKPQCKICRSC 446 Query: 162 -----EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 + F L + +L + ++ P R + S+++ GLK ++R Sbjct: 447 PVVRSSQHLFLDLPKLEKRLEDWLGKTVPGSDWTPNARFIIRSWLRDGLKPRCITRD-LK 505 Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWP----ADLH-VIGKDI 267 WG +P + + YVW DA Y++ T Y D + K+W DL+ + KD Sbjct: 506 WGTPVPLEGFEDKVFYVWFDATIGYVSITANYTDQWE----KWWKNPEQVDLYQFMAKDN 561 Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324 + FH + +P +L A N L K + + ++ ++ K SKS G V + + D Sbjct: 562 VPFHGLVFPCSVLGAEDNYTLVKHIIATEYLNYEDGKFSKSRGIGVFGDMAKDTGIPADI 621 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 R++L+ G+D + L + N++L N +GN ++R+ + K + G +P A T Sbjct: 622 WRFYLLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCVPE-MALT 680 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNP 441 D +++ S LQ + ++ I AL ++++ ++Y +PW+ K + Sbjct: 681 PDDRRLVAHVSWELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGGEMDR 740 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 RA TV + V + L+++LQ ++P +++ I Sbjct: 741 QRAGTVTGMAVNMAALLSVMLQPYMPTVSSTI 772 >gi|242820726|ref|XP_002487564.1| methionyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500] gi|218714029|gb|EED13453.1| methionyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500] Length = 672 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 136/573 (23%), Positives = 238/573 (41%), Gaps = 80/573 (13%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR++R G L+ G+DE+G A Sbjct: 16 ILITSALPYVNNVPHLGNIIGSVLPADVFARYNRARGFPTLYICGSDEYGTATETKALEE 75 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH----HDTCRILWKK--ISDKGDI 119 GVT + + + + D +I +D F RT D R LW+ I ++ Sbjct: 76 GVTPEELCAKYHAIHKGIYDWFNIEFDIFGRTPTAHQTKIVQDVFRGLWENGYIEERETT 135 Query: 120 YKGC-------------YSGWYSLRDEAYYNDDEVYK--------------GADGQYYNA 152 C G S+ + D+ K DG+ + Sbjct: 136 QPYCPVEGHASFLADRFVEGECSICGDPGARGDQCDKCGNLLDPLEPDAKESGDGEEQDV 195 Query: 153 QHNPVQWM---------------EEEGYFFRLSAYQDKLLSYYES-HPEFILPIERRNEV 196 + W+ + + + RL A +DK++ ++E E I + V Sbjct: 196 EARATGWLINPRCKLDGATPEKRKTKHLYLRLDALKDKIVPWFEKVSKENDWSINTTSIV 255 Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIP------DDPQY---IMYVWIDALTNYLTTTGYL-- 245 S++ GLK +++R WG+ IP D+ Y + YVW DA Y++ T Sbjct: 256 QSWIDRGLKPRAITRD-IKWGVPIPKGIKGLDEEAYKNKVFYVWFDACIGYVSITANYTD 314 Query: 246 -DNPDGSKAKFWPADLHVI------GKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFI 296 DN +G K + W ++ GKD + FH+I +P L + + + K+ + ++ Sbjct: 315 GDNLEGKKWEQWWKHPELVSLYQFMGKDNVPFHSIIFPGSQLGSGMTWTQVHKISATEYL 374 Query: 297 LHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 ++G K SKS G V VG D R++L+ D + D N +L Sbjct: 375 NYEGGKFSKSKGVGVFGTSAKDTGVGPDIWRFYLLSRRPESSDTEFKWDEFVSTNNNELL 434 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS----VCSRVLQEIRENMQNQLIH 411 +GNLV+R + +G++P A E+ +++L+ + L+ M + Sbjct: 435 KNLGNLVARVTKFCIAKMNGVVPEYSA--EAGKAVLTEHENQVNTHLKSYNTYMDATKMR 492 Query: 412 RALAQVISLVSEVDRYF-DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 AL ++ + S ++ D + L PDR + V+ + + I LA +L F+P+ + Sbjct: 493 PALNDIMHISSLGNKLLQDNKLDNRLFTEEPDRCAAVINIALNHIHLLASILSPFMPQTS 552 Query: 471 NKIFDILFVADENRCFQS-LDQRLKPGFMLHKT 502 IF+ L E R + + LKPG L ++ Sbjct: 553 KSIFEQLGAVPEARIPEKWVTDALKPGHKLGES 585 >gi|114771637|ref|ZP_01449041.1| methionyl-tRNA synthetase [alpha proteobacterium HTCC2255] gi|114547709|gb|EAU50599.1| methionyl-tRNA synthetase [alpha proteobacterium HTCC2255] Length = 570 Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 111/522 (21%), Positives = 218/522 (41%), Gaps = 49/522 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + I++A+ Y N H+G+ + +DV ARF R G +V+F TDEHG AA Sbjct: 3 RTLITSALPYINGVKHLGNLIGSQLPSDVYARFCRAKGHEVMFICATDEHGTPAELAAAK 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + + ++A +S+D F R++ +++H + K+++ G I + Sbjct: 63 AGKNVADYCMEMHDVQFELARGFRLSFDHFGRSSSEQNHLLTQYFAGKLAENGLIEEISE 122 Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160 YS D+ Y D + +G + Q P + Sbjct: 123 KQVYSNTDKRYLPDRYIEGECPNCGSPDARGDQCENCTKQLEPTDLINPRSAISGSTDLE 182 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E + + + S ++KL ++ + ++ + + GL+D ++R DWG+ Sbjct: 183 VRETKHLYLKQSKMREKLDNWIKQKSDWPILTTSIAKKWLHDGDGLQDRGITRD-LDWGV 241 Query: 219 KIPDDP-------QYIMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPAD-------- 259 + + YVW DA Y+ T + P ++W D Sbjct: 242 PVKKGAVDWGGMEGKVFYVWFDAPIEYIAATAEWAAKNNKPKEEWERWWRTDKGAENVNY 301 Query: 260 LHVIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 + +GKD + FH + +PA ++ A N L + S ++ + G + S S G + + + Sbjct: 302 VQFMGKDNVPFHTLSFPATIMGADDNWKLVDFIKSFNYLNYDGGQFSTSKGRGVFMNQAL 361 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 + + D R++L+ + D + D ++ VN DLA+ +GN VSR + +I Sbjct: 362 DILPSDYWRWWLLSNVPESSDSEFTWDSFQQGVNKDLADVLGNFVSRITKFCRSKFGEII 421 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P + + ++++ + NM + ++ A + ++ S + Y PW L Sbjct: 422 PEGNEYGPREFTVINQLEERIASYENNMAKMEVRKSAADLRAIWSIGNEYLQDAAPWTLF 481 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 K +P ++T++ + +I A L + F+P + + + V Sbjct: 482 KEDPQSSATIVRFALNLIPLYAALSEPFIPDATDTMVTAMNV 523 >gi|145630903|ref|ZP_01786680.1| methionyl-tRNA synthetase [Haemophilus influenzae R3021] gi|144983563|gb|EDJ91031.1| methionyl-tRNA synthetase [Haemophilus influenzae R3021] Length = 464 Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 81/281 (28%), Positives = 144/281 (51%), Gaps = 13/281 (4%) Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP-- 257 +S L+ +SR +G +IP YVW+DA Y+ + L +G +FW Sbjct: 6 ESSLQQWDISRDAPYFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWAEG 65 Query: 258 --ADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 A+L H IGKDI+ FH+++WPA L + P VF+HG++ G K+SKS G I Sbjct: 66 SDAELYHFIGKDIVYFHSLFWPAMLEGSGYRKPTNVFTHGYVTVDGAKMSKSRGTFIQAS 125 Query: 315 EVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 + + + LRY+ ++ +D ++ D +RVN D+ N + NL SR+ I K + Sbjct: 126 TYLNHIDPECLRYYYAAKLNDRIEDLDFNLDDFVQRVNTDIVNKLVNLASRNAGFIAKRF 185 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 +G + A DE++ + + ++I +++ ++A+ ++++L + ++Y D + P Sbjct: 186 EGKL----ADKLEDEALFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAP 241 Query: 434 WELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 W + K A V + +E+ R L L+ +PKLA + Sbjct: 242 WVIAKEEGKEAELQAVCSMGIELFRVLMSYLKPVLPKLAER 282 >gi|284172357|ref|NP_001165053.1| methionyl-tRNA synthetase, cytoplasmic isoform 1 [Mus musculus] Length = 910 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 119/508 (23%), Positives = 223/508 (43%), Gaps = 47/508 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 268 VLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRQWNTLYLCGTDEYGTATETKAMEE 327 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ IS+D F RTT + + +++++ +G + + Sbjct: 328 GLTPREICDKYHAIHADIYRWFGISFDTFGRTTTPQQTKITQDIFQRLLTRGFVLRDTVE 387 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161 R + D V Y+ A G + + +E Sbjct: 388 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDRCGKLINAIELKKPQCKICRSCPVVR 447 Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + F L + +L + ++ P R + S+++ GLK ++R WG Sbjct: 448 SSQHLFLDLPKLEKRLEDWLGKTVPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGTP 506 Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDILRFH 271 +P + + YVW DA Y++ T Y D + K+W V + KD + FH Sbjct: 507 VPLEGFEDKVFYVWFDATIGYVSITANYTDQWE----KWWKNPEQVDLYQFMAKDNVPFH 562 Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328 + +P +L A N L K + + ++ ++ K SKS G V + + D R++ Sbjct: 563 GLVFPCSVLGAEDNYTLVKHIIATEYLNYEDGKFSKSRGIGVFGDMAKDTGIPADIWRFY 622 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L+ G+D + L + N++L N +GN ++R+ + K + G +P A T D Sbjct: 623 LLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCVPE-MALTPDDR 681 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRAS 445 +++ S LQ + ++ I AL ++++ ++Y +PW+ K + RA Sbjct: 682 RLVAHVSWELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGGEMDRQRAG 741 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473 TV + V + L+++LQ ++P +++ I Sbjct: 742 TVTGMAVNMAALLSVMLQPYMPTVSSTI 769 >gi|195120732|ref|XP_002004875.1| GI20156 [Drosophila mojavensis] gi|193909943|gb|EDW08810.1| GI20156 [Drosophila mojavensis] Length = 1032 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 131/552 (23%), Positives = 236/552 (42%), Gaps = 58/552 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD+ AR+ R G + L GTDE+G A Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIFARYSRAAGYNTLLICGTDEYGTATENKALAE 315 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 +T + D+ + I +D F RTT + + +K + + G I Sbjct: 316 NMTPREICDKYFELHNSIYRWFGIGFDYFGRTTTPEQTEIVQEAFKDVYEAGYILTESVE 375 Query: 126 GWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME-------------- 161 + + + D V Y+ A G + V E Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELVRPRCKVCNTAPV 435 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + F L + KL + + E R ++++ GLK ++R WGI Sbjct: 436 LRSSDQLFLDLPKAEPKLREWVD-RAEQGWTHNARVITRAWLREGLKPRCITRD-LKWGI 493 Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD------LHVIGKDILR 269 +P Q + YVW DA Y++ T ++W PA + KD + Sbjct: 494 PVPHKNFEQKVFYVWFDAPFGYVSITKRYTK---DYLQWWQPAPGTDVELFQFMAKDNVP 550 Query: 270 FHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DAL 325 FH++ WP+ LL+ N L + + ++ ++ K SKS G + + +E G+ D Sbjct: 551 FHSVVWPSVLLAINKGNTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDA-QETGIPADVW 609 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 R++L G+D + L R N++L N +GN V+R++S +++D +P Sbjct: 610 RFYLASARPEGQDSSFSWTDLAARNNSELLNNLGNFVNRALSFCERNFDSKLPQID-LNH 668 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--- 442 +D +L++ +R L+ +++ + + ++S+ + Y Q+PW L K + D Sbjct: 669 NDFLLLALINRELRGYINSLEKAKMRDGIRHLLSISRHGNGYIQYQQPWALLKGSDDQKT 728 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFM 498 RA T++ +++ ++ LA LL F+P A +F L D N+ F +L L+PG Sbjct: 729 RAGTIIGLSINIVCLLANLLFPFMPTTARAMFAQLNTKQTPLDANKPFATL--LLRPGHK 786 Query: 499 LHKTFDPIFPRF 510 + T P+F + Sbjct: 787 IG-TPSPLFNKL 797 >gi|51491852|ref|NP_001003913.1| methionyl-tRNA synthetase, cytoplasmic isoform 2 [Mus musculus] gi|81884328|sp|Q68FL6|SYMC_MOUSE RecName: Full=Methionyl-tRNA synthetase, cytoplasmic; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|51260910|gb|AAH79643.1| Methionine-tRNA synthetase [Mus musculus] Length = 902 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 119/508 (23%), Positives = 223/508 (43%), Gaps = 47/508 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 268 VLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRQWNTLYLCGTDEYGTATETKAMEE 327 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ IS+D F RTT + + +++++ +G + + Sbjct: 328 GLTPREICDKYHAIHADIYRWFGISFDTFGRTTTPQQTKITQDIFQRLLTRGFVLRDTVE 387 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161 R + D V Y+ A G + + +E Sbjct: 388 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDRCGKLINAIELKKPQCKICRSCPVVR 447 Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + F L + +L + ++ P R + S+++ GLK ++R WG Sbjct: 448 SSQHLFLDLPKLEKRLEDWLGKTVPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGTP 506 Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDILRFH 271 +P + + YVW DA Y++ T Y D + K+W V + KD + FH Sbjct: 507 VPLEGFEDKVFYVWFDATIGYVSITANYTDQWE----KWWKNPEQVDLYQFMAKDNVPFH 562 Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328 + +P +L A N L K + + ++ ++ K SKS G V + + D R++ Sbjct: 563 GLVFPCSVLGAEDNYTLVKHIIATEYLNYEDGKFSKSRGIGVFGDMAKDTGIPADIWRFY 622 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L+ G+D + L + N++L N +GN ++R+ + K + G +P A T D Sbjct: 623 LLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCVPE-MALTPDDR 681 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRAS 445 +++ S LQ + ++ I AL ++++ ++Y +PW+ K + RA Sbjct: 682 RLVAHVSWELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGGEMDRQRAG 741 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473 TV + V + L+++LQ ++P +++ I Sbjct: 742 TVTGMAVNMAALLSVMLQPYMPTVSSTI 769 >gi|203288026|ref|YP_002223041.1| methionyl-tRNA synthetase [Borrelia recurrentis A1] gi|226710895|sp|B5RPT6|SYM_BORRA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|201085246|gb|ACH94820.1| methionyl-tRNA synthetase [Borrelia recurrentis A1] Length = 726 Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 116/512 (22%), Positives = 229/512 (44%), Gaps = 57/512 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++K I+ A+ Y N PH+G+ +++ AD AR+ R+ G++ L+ GTDE+G A Sbjct: 2 QKKNLITAALPYVNNIPHLGNLVQVLSADAFARYSRMMGIETLYVCGTDEYGTATETKAL 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 T + ++ + + + +I +D F RTT K H +T + L+ K+ G I + Sbjct: 62 IEKTTPEELCNKYHAIHKSIYEWFNIKFDIFGRTTNKYHKETVQDLFLKLDKNGYITEKE 121 Query: 124 YSGWYSLRDEAYYND----------------DEVYKGADGQYYNAQHNPVQWM------- 160 ++ +D+ + D D+ ++ N NP + Sbjct: 122 NEQFFCQQDQMFLADRYVTGECPNCGNNTKGDQCENCSNLLVTNELLNPRCIICKNIPII 181 Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEF----ILPIERRNEVISFVKSGLKDLSLSRKTFD 215 + + + L +++L + + + I I+ N +F++ GLK+ +++R Sbjct: 182 KKTKHLYIDLPKIKNELEHWIQQIDQNTNWNINAIKITN---AFLRDGLKERTITRD-LK 237 Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTGYL---------DNPDGSKAKFWPADLHVIG 264 WGI +P + YVW DA Y++ T + +N D + +F IG Sbjct: 238 WGIPVPKKEYENKVFYVWFDAPIGYISITKEIIKDWESWWKNNEDTNLIQF-------IG 290 Query: 265 KDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVG 321 KD + FH I +P+ L + N + K+ S ++ ++ K SKS G I +VI E+ Sbjct: 291 KDNILFHTIMFPSIELGSQENWTMLNKLASSEYLNYENLKFSKSAGTGIFGNDVITTEIP 350 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D R+++ D + D +R+N++L NL++R ++ K + I Sbjct: 351 SDVWRFYIYYNRPEKADFQFMWDDFMERINSELIGNFSNLINRVLTFYKKFFGDKIDK-- 408 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 E +E+ + + + + + AL +++ + ++ F ++PW+ K + P Sbjct: 409 --IELNENFWQIVNIKYERTINFFKQIELKAALKEILDISRIGNKIFQDKEPWKTKNSTP 466 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +L + +IR L+IL+ F+P +++I Sbjct: 467 QTTKELLLNLIYLIRDLSILISPFMPHTSDRI 498 >gi|312147894|gb|ADQ30553.1| methionyl-tRNA synthetase [Borrelia burgdorferi JD1] Length = 734 Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 113/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ A+ Y N PH+G+ +++ AD AR+ ++ G++ L+ GTDE+G A T Sbjct: 7 VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + + +I +D F RTT K H D + + ++ G I + +Y Sbjct: 67 PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFY 126 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +D + D + KG + NP + + + K Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186 Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223 Y P+ +E+ +N S F++ GLK+ +++R WGI +P Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276 + YVW DA Y++ T N + +W + V IGKD + FH I +P Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302 Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333 + + N + ++ S ++ ++ K SKS G I + I + D R+++ Sbjct: 303 CIEIGSEENWTMLNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + L +RVN +L + NLV+R ++ K + +I T + + I Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++L ++ + AL +++ + S ++ F +PW+ K +P ++ + Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478 Query: 454 VIRQLAILLQAFVPKLANKI 473 +IR L+IL+ F+P+ + KI Sbjct: 479 LIRDLSILMMPFIPETSKKI 498 >gi|110667531|ref|YP_657342.1| methionyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790] gi|121689847|sp|Q18JV4|SYM_HALWD RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|109625278|emb|CAJ51700.1| methionine--tRNA ligase [Haloquadratum walsbyi DSM 16790] Length = 741 Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 116/529 (21%), Positives = 219/529 (41%), Gaps = 77/529 (14%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ + Y N HIGH + D+ +R + G + F +G+D HG +A A GVT Sbjct: 31 VTCGLPYANGDLHIGHLRTYVGGDIFSRALKRLGQETAFVSGSDMHGTPVAVNAAEEGVT 90 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK------- 121 + F ++ + I +D++ T ++ + + R + + + G +Y+ Sbjct: 91 PESFALRHHEQYETTFPQFGIEFDNYGHTHDETNVEMTREIVEALIQAGYVYEREIPVAY 150 Query: 122 -GCYSGWYSLR--------DEAYYNDDEVYKGADGQYYNAQH----------NPVQWMEE 162 W R A+ DE +G G++ N ++ Sbjct: 151 DPAADQWLPDRFVNGTCPYCGAHARGDECDEGC-GRHLEPGEIETPVSTITGNDAEYRRR 209 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222 E FF +S Q L S+ + +N+ +V+ L+D ++R DWG+ PD Sbjct: 210 EHQFFAVSELQSYLSSFLD---RLEGTTNAQNQPREWVEGELQDWCITRD-MDWGVDYPD 265 Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-------------------------- 256 D ++YVW+DA Y+++T G+ + W Sbjct: 266 DNDLVLYVWVDAPIEYISSTKQYAERVGTDSFDWKNAWRDIPGVRSHSSSSAKDSSEGNS 325 Query: 257 PADLHVIGKDIL-------RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309 P++++ G+ I + H ++WPA L +A P+ V + GFI +G+ S S Sbjct: 326 PSNINNGGEIIHIIGRDIIQHHTVFWPAMLHAAGYTEPRAVMASGFITLEGKGFSTSRNR 385 Query: 310 VIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 + E + E D LRY+L +D + ++RVN +L +GN + RS+ Sbjct: 386 AVWADEYLAEGFHPDLLRYYLATNGGFQQDVDFSWSRFRERVNNELVGTVGNFIYRSLLF 445 Query: 369 ILKDYDGMIPTPG-AFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQ-VISLVSEVD 425 +++DG TP A ++S +E I + + N+ RA+ + L + Sbjct: 446 AAREFDG---TPDVALSDSVEERIETAIDAFTAGV-----NEYSVRAVGDAAVKLAQFGN 497 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 Y +PW+L +P + V+ +++ + +A+L + P A +++ Sbjct: 498 EYIQHHEPWKLSNDDPQK-QQVMRDCIQLAKAIAVLFEPVTPAAAERVW 545 >gi|115481896|ref|NP_001064541.1| Os10g0400100 [Oryza sativa Japonica Group] gi|78708564|gb|ABB47539.1| methionyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica Group] gi|113639150|dbj|BAF26455.1| Os10g0400100 [Oryza sativa Japonica Group] gi|215695151|dbj|BAG90342.1| unnamed protein product [Oryza sativa Japonica Group] gi|218184471|gb|EEC66898.1| hypothetical protein OsI_33478 [Oryza sativa Indica Group] gi|222612783|gb|EEE50915.1| hypothetical protein OsJ_31437 [Oryza sativa Japonica Group] Length = 605 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 125/529 (23%), Positives = 234/529 (44%), Gaps = 59/529 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + +++A+ Y N PH+G+ ++ AD AR+ RL G +VL+ GTDE+G A Sbjct: 14 RRNVLVTSALPYVNNVPHLGNIIGCVLSADAFARYCRLRGHNVLYVCGTDEYGTATETKA 73 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G + + D+ +++ + DIS+D F RT+ + + C+ ++ K+ D + + Sbjct: 74 MEEGCSPREICDKYHAIHKEVYEWFDISFDIFGRTSSPQQTEVCQDIFLKLLDNNWLSEN 133 Query: 123 CYSGWYSLRDEAYYNDD--EVYKGADGQYYNAQH-----------------NPVQWM--- 160 Y + + D E Y +G Y++ NP + Sbjct: 134 TMQQLYCNSCQRFLADRLVEGYCPTEGCNYDSARGDQCEKCGKLLNSTELVNPKCKVCGS 193 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI----SFVKSGLKDLSLSR 211 + + F L ++KL Y + E L I +++K GLK ++R Sbjct: 194 TPCVRDTDHLFLELPLLREKLEKYID---ETSLTGSWSQNAIHATNAWLKEGLKPRCITR 250 Query: 212 KTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKD 266 WG+ +P + + YVW DA Y++ T P+ K P ++ + +GKD Sbjct: 251 D-LKWGVPVPHEKYKDKVFYVWFDAPIGYISITACY-TPEWEKWWKNPENVELYQFMGKD 308 Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEE 319 + FH + +P+ LL N L K + ++ ++ K SK+ GN + E Sbjct: 309 NVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKTKGIGVFGNDAKSTNIPPE 368 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDG 375 V RY+L+ D + L+ + N +L N +GN ++R +S I K Y Sbjct: 369 V----WRYYLLTNRPEASDTLFTWTDLQAKCNNELLNNLGNFINRVLSFIAKPEGTGYGS 424 Query: 376 MIP-TPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 ++P +P + + +S+ +++ + + M I + L +++ SE + Y + Sbjct: 425 VVPDSPDVDSHALTQSLAETVGKLIDQYIDAMDKVKIKQGLKIAMAISSEGNAYLQESQF 484 Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 W+L K +P +TV+ +V ++ LA LL+ F+P + + L ++ E Sbjct: 485 WKLYKQDPASCATVMKTSVGIVYLLACLLEPFMPTFSKDVLQQLNLSPE 533 >gi|216264496|ref|ZP_03436488.1| methionyl-tRNA synthetase [Borrelia burgdorferi 156a] gi|215980969|gb|EEC21776.1| methionyl-tRNA synthetase [Borrelia burgdorferi 156a] Length = 734 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 113/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ A+ Y N PH+G+ +++ AD AR+ ++ G++ L+ GTDE+G A T Sbjct: 7 VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + + +I +D F RTT K H D + + ++ G I + +Y Sbjct: 67 PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFY 126 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +D + D + KG + NP + + + K Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186 Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223 Y P+ +E+ +N S F++ GLK+ +++R WGI +P Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276 + YVW DA Y++ T N + +W + V IGKD + FH I +P Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302 Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333 + + N + ++ S ++ ++ K SKS G I + I + D R+++ Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + L +RVN +L + NLV+R ++ K + +I T + + I Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++L ++ + AL +++ + S ++ F +PW+ K +P ++ + Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478 Query: 454 VIRQLAILLQAFVPKLANKI 473 +IR L+IL+ F+P+ + KI Sbjct: 479 LIRDLSILMMPFIPETSKKI 498 >gi|15594932|ref|NP_212721.1| methionyl-tRNA synthetase [Borrelia burgdorferi B31] gi|3915073|sp|Q44951|SYM_BORBU RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|2688510|gb|AAB91520.1| methionyl-tRNA synthetase (metG) [Borrelia burgdorferi B31] Length = 734 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 113/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ A+ Y N PH+G+ +++ AD AR+ ++ G++ L+ GTDE+G A T Sbjct: 7 VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + + +I +D F RTT K H D + + ++ G I + +Y Sbjct: 67 PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFY 126 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +D + D + KG + NP + + + K Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186 Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223 Y P+ +E+ +N S F++ GLK+ +++R WGI +P Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276 + YVW DA Y++ T N + +W + V IGKD + FH I +P Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302 Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333 + + N + ++ S ++ ++ K SKS G I + I + D R+++ Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + L +RVN +L + NLV+R ++ K + +I T + + I Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++L ++ + AL +++ + S ++ F +PW+ K +P ++ + Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478 Query: 454 VIRQLAILLQAFVPKLANKI 473 +IR L+IL+ F+P+ + KI Sbjct: 479 LIRDLSILMMPFIPETSKKI 498 >gi|221218149|ref|ZP_03589615.1| methionyl-tRNA synthetase [Borrelia burgdorferi 72a] gi|223889005|ref|ZP_03623596.1| methionyl-tRNA synthetase [Borrelia burgdorferi 64b] gi|225549495|ref|ZP_03770461.1| methionyl-tRNA synthetase [Borrelia burgdorferi 118a] gi|221192097|gb|EEE18318.1| methionyl-tRNA synthetase [Borrelia burgdorferi 72a] gi|223885821|gb|EEF56920.1| methionyl-tRNA synthetase [Borrelia burgdorferi 64b] gi|225369772|gb|EEG99219.1| methionyl-tRNA synthetase [Borrelia burgdorferi 118a] Length = 734 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 113/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ A+ Y N PH+G+ +++ AD AR+ ++ G++ L+ GTDE+G A T Sbjct: 7 VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + + +I +D F RTT K H D + + ++ G I + +Y Sbjct: 67 PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFY 126 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +D + D + KG + NP + + + K Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186 Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223 Y P+ +E+ +N S F++ GLK+ +++R WGI +P Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276 + YVW DA Y++ T N + +W + V IGKD + FH I +P Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302 Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333 + + N + ++ S ++ ++ K SKS G I + I + D R+++ Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + L +RVN +L + NLV+R ++ K + +I T + + I Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++L ++ + AL +++ + S ++ F +PW+ K +P ++ + Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478 Query: 454 VIRQLAILLQAFVPKLANKI 473 +IR L+IL+ F+P+ + KI Sbjct: 479 LIRDLSILMMPFIPETSKKI 498 >gi|148692551|gb|EDL24498.1| methionine-tRNA synthetase, isoform CRA_b [Mus musculus] Length = 916 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 119/508 (23%), Positives = 223/508 (43%), Gaps = 47/508 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 274 VLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRQWNTLYLCGTDEYGTATETKAMEE 333 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ IS+D F RTT + + +++++ +G + + Sbjct: 334 GLTPREICDKYHAIHADIYRWFGISFDTFGRTTTPQQTKITQDIFQRLLTRGFVLRDTVE 393 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161 R + D V Y+ A G + + +E Sbjct: 394 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDRCGKLINAIELKKPQCKICRSCPVVR 453 Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + F L + +L + ++ P R + S+++ GLK ++R WG Sbjct: 454 SSQHLFLDLPKLEKRLEDWLGKTVPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGTP 512 Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDILRFH 271 +P + + YVW DA Y++ T Y D + K+W V + KD + FH Sbjct: 513 VPLEGFEDKVFYVWFDATIGYVSITANYTDQWE----KWWKNPEQVDLYQFMAKDNVPFH 568 Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328 + +P +L A N L K + + ++ ++ K SKS G V + + D R++ Sbjct: 569 GLVFPCSVLGAEDNYTLVKHIIATEYLNYEDGKFSKSRGIGVFGDMAKDTGIPADIWRFY 628 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L+ G+D + L + N++L N +GN ++R+ + K + G +P A T D Sbjct: 629 LLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCVPE-MALTPDDR 687 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRAS 445 +++ S LQ + ++ I AL ++++ ++Y +PW+ K + RA Sbjct: 688 RLVAHVSWELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGGEMDRQRAG 747 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473 TV + V + L+++LQ ++P +++ I Sbjct: 748 TVTGMAVNMAALLSVMLQPYMPTVSSTI 775 >gi|225552399|ref|ZP_03773339.1| methionyl-tRNA synthetase [Borrelia sp. SV1] gi|225371397|gb|EEH00827.1| methionyl-tRNA synthetase [Borrelia sp. SV1] Length = 734 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 113/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ A+ Y N PH+G+ +++ AD AR+ ++ G++ L+ GTDE+G A T Sbjct: 7 VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + + +I +D F RTT K H D + + ++ G I + +Y Sbjct: 67 PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKHHQDIVQNFFLQLEKNGYIKERETEQFY 126 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +D + D + KG + NP + + + K Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186 Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223 Y P+ +E+ +N S F++ GLK+ +++R WGI +P Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276 + YVW DA Y++ T N + +W + V IGKD + FH I +P Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302 Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333 + + N + ++ S ++ ++ K SKS G I + I + D R+++ Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + L +RVN +L + NLV+R ++ K + +I T + + I Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++L ++ + AL +++ + S ++ F +PW+ K +P ++ + Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478 Query: 454 VIRQLAILLQAFVPKLANKI 473 +IR L+IL+ F+P+ + KI Sbjct: 479 LIRDLSILMMPFIPETSKKI 498 >gi|332181112|gb|AEE16800.1| Methionyl-tRNA synthetase [Treponema brennaborense DSM 12168] Length = 781 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 117/522 (22%), Positives = 223/522 (42%), Gaps = 60/522 (11%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I++A+ Y N PH+G+ +++ ADV ARF R G D L+ GTDE+G A T Sbjct: 6 ITSALPYVNNIPHLGNLIQVLSADVFARFCRSRGYDTLYVCGTDEYGTATETRALEEKKT 65 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + D D+ I++D F RT+ + + + ++ + G I + + Sbjct: 66 PRELCDYYHAIHADIYKWFGIAFDHFGRTSAAQQTEIVQRMFLDLDKNGFIRENTIEQLF 125 Query: 129 S-----------LRDEAYYNDDEVYKGADGQYYNAQHNPVQWME--------------EE 163 +R + E +G + PV+ + Sbjct: 126 CPDCGRFLADRFVRGTCPHCGYEDARGDQCENCGKLLEPVELKSPRCSTCGGTPHLKSTK 185 Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIKI 220 + L A Q + ++ E + +N V ++++ GL + +++R WGI + Sbjct: 186 HLYIDLPAIQKRYGAWMEEAS--VKGKWAKNAVQMTQAWIRDGLHERAITRD-LKWGIPV 242 Query: 221 PDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-------FW------------PAD 259 P + YVW DA Y++ T L + + K +W P D Sbjct: 243 PKTGFEDKVFYVWFDAPIGYISITKALADTLAAHGKDSFDWKSWWLPGESAEAAGKPPVD 302 Query: 260 L-HVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEV 316 L IGKD + FH + +P+ L+ + K + S ++ ++ K SKS G + + Sbjct: 303 LFQFIGKDNIPFHTVIFPSTLIGSGRDWTKLYHMSSTEYLNYESGKFSKSKGIGVFGSDA 362 Query: 317 IEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 E + DA R+++ D + +++ N +L +GNLV+R+++ + + Y G Sbjct: 363 KESGIPADAWRFYIFYNRPEKSDTQFLWKDFQEKYNGELIGNLGNLVNRTLTFVSRYYGG 422 Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 +IP P A DE + SV +I E ++ + A ++ ++ S ++ F +PW+ Sbjct: 423 VIPEPAA----DEQLWSVVRAGESKITELLEWAELKDAFRELFAVSSVANKAFQDGEPWK 478 Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + T+P++A++++ VI+ L I+ ++P K+ Sbjct: 479 TRNTDPEKAASLIGNLCYVIKDLMIMAHPYLPHYTEKVMSFF 520 >gi|291409351|ref|XP_002720959.1| PREDICTED: methionyl-tRNA synthetase isoform 1 [Oryctolagus cuniculus] Length = 908 Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 120/509 (23%), Positives = 223/509 (43%), Gaps = 49/509 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 325 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 326 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLSRGFVLQDTVE 385 Query: 126 GWYSLRDEAYYNDDEV--------YKGADG------------------QYYNAQHNPVQW 159 R + D V Y+ A G Q + +PV Sbjct: 386 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCRSSPVV- 444 Query: 160 MEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + F L +++L + ++ P R + S+++ GLK ++R WG Sbjct: 445 KSSQHLFLDLPKLEERLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGT 503 Query: 219 KIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDILRF 270 +P + + YVW DA YL+ T Y D + ++W V + KD + F Sbjct: 504 PVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVDLYQFMAKDNVPF 559 Query: 271 HAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRY 327 H + +P L A N L K + + ++ ++ K SKS G V + + D R+ Sbjct: 560 HGLVFPCSALGAEDNYTLVKHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRF 619 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 +L+ G+D + + + N++L N +GN ++R+ + K + G +P T D Sbjct: 620 YLLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGCVPE-MVLTSDD 678 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRA 444 +L+ + LQ + ++ I AL ++++ ++Y +PW+ K + RA Sbjct: 679 RRLLAHVTLELQHYHQLLEKARIRDALRSILTISRHGNQYIQVNEPWKRIKGDEADRQRA 738 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKI 473 TV + V V L+++LQ ++P ++ I Sbjct: 739 GTVTGMAVNVAALLSVMLQPYMPTVSASI 767 >gi|291409353|ref|XP_002720960.1| PREDICTED: methionyl-tRNA synthetase isoform 2 [Oryctolagus cuniculus] Length = 900 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 120/509 (23%), Positives = 223/509 (43%), Gaps = 49/509 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 325 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 326 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLSRGFVLQDTVE 385 Query: 126 GWYSLRDEAYYNDDEV--------YKGADG------------------QYYNAQHNPVQW 159 R + D V Y+ A G Q + +PV Sbjct: 386 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCRSSPVV- 444 Query: 160 MEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + F L +++L + ++ P R + S+++ GLK ++R WG Sbjct: 445 KSSQHLFLDLPKLEERLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGT 503 Query: 219 KIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDILRF 270 +P + + YVW DA YL+ T Y D + ++W V + KD + F Sbjct: 504 PVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVDLYQFMAKDNVPF 559 Query: 271 HAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRY 327 H + +P L A N L K + + ++ ++ K SKS G V + + D R+ Sbjct: 560 HGLVFPCSALGAEDNYTLVKHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRF 619 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 +L+ G+D + + + N++L N +GN ++R+ + K + G +P T D Sbjct: 620 YLLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGCVPE-MVLTSDD 678 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRA 444 +L+ + LQ + ++ I AL ++++ ++Y +PW+ K + RA Sbjct: 679 RRLLAHVTLELQHYHQLLEKARIRDALRSILTISRHGNQYIQVNEPWKRIKGDEADRQRA 738 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKI 473 TV + V V L+++LQ ++P ++ I Sbjct: 739 GTVTGMAVNVAALLSVMLQPYMPTVSASI 767 >gi|302537896|ref|ZP_07290238.1| methionyl-tRNA synthetase [Streptomyces sp. C] gi|302446791|gb|EFL18607.1| methionyl-tRNA synthetase [Streptomyces sp. C] Length = 571 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 125/513 (24%), Positives = 222/513 (43%), Gaps = 54/513 (10%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N H+G+ M+ ADV +R+ R G DVL+ TDEHG AA+ G+ Sbjct: 6 ITSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHDVLYICATDEHGTPAELAAKENGL 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 F Q + + D ++S+D F R++ ++ + + +++ G I + Sbjct: 66 PVSEFCAQAHDAQKAVYDGFELSFDYFGRSSSAQNVEITQHFARQLQANGFIEERAIRQV 125 Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWME--------------E 162 YS D + D V Y A G Q N +P +E E Sbjct: 126 YSPADGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLIEPRSAISGSTELEVRE 185 Query: 163 EGYFFRL-SAYQDKLLSYYESH----PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + F L S Q ++ ++ H P+ I R+ ++ GL D +++R DWG Sbjct: 186 TKHLFLLQSKLQHEVEAWVARHEDEWPQLASSIARK-----WLTEGLHDRAITRD-LDWG 239 Query: 218 IKIPDD--PQY-----IMYVWIDALTNYLTTTGYLDNPDGS----KAKFWPAD----LHV 262 + +P D P+ + YVW DA Y+ +T + D + K+ ++ A+ Sbjct: 240 VPVPADTWPELAAEGKVFYVWFDAPIEYIASTKEWADADPANRDYKSWWYEAEDVRYTQF 299 Query: 263 IGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 + KD + FH + +PA L P + V + ++ + G K S S + + +E + Sbjct: 300 MAKDNVPFHTVMFPATELGTREPWKMVDYVKAFNWLTYYGGKFSTSQKRGVFTDQALEIL 359 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D RYFL+ D + + VN DL +GN V+R ++ K + +P Sbjct: 360 PADFWRYFLIANAPESDDSSFTWEHFAATVNKDLGGTLGNFVNRVLTFSRKKFGDEVPAG 419 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 E++ + + +L E +M+ +A A + +L S + Y D + PW KT+ Sbjct: 420 NPAGEAESRLGEQIAELLAEYEGHMETLQYRKAAAALRALWSAGNAYLDEKAPWLEVKTD 479 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 D A+ L + +I +++ + F+P A + Sbjct: 480 LDAAALTLRTAMNLIHLYSVVSEPFIPASARAM 512 >gi|226321211|ref|ZP_03796746.1| methionyl-tRNA synthetase [Borrelia burgdorferi 29805] gi|226233379|gb|EEH32125.1| methionyl-tRNA synthetase [Borrelia burgdorferi 29805] Length = 708 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 112/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ A+ Y N PH+G+ +++ AD AR+ ++ G++ L+ GTDE+G A T Sbjct: 7 VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + + +I +D F RTT K H D + + ++ G I + ++ Sbjct: 67 PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFF 126 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +D + D + KG + NP + + + K Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186 Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223 Y P+ +E+ +N S F++ GLK+ +++R WGI +P Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKSWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276 + YVW DA Y++ T N + +W + V IGKD + FH I +P Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302 Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333 + + N + ++ S ++ ++ K SKS G I + I + D R+++ Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + L +RVN +L + NLV+R ++ K + +I T + + I Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++L ++ + AL +++ + S ++ F +PW+ K +P ++ + Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478 Query: 454 VIRQLAILLQAFVPKLANKI 473 +IR L+IL+ F+P+ + KI Sbjct: 479 LIRDLSILMMPFIPETSKKI 498 >gi|119953372|ref|YP_945581.1| methionyl-tRNA synthetase [Borrelia turicatae 91E135] gi|254782854|sp|A1R019|SYM_BORT9 RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|119862143|gb|AAX17911.1| methionyl-tRNA synthetase [Borrelia turicatae 91E135] Length = 726 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 117/511 (22%), Positives = 219/511 (42%), Gaps = 55/511 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++K I+ A+ Y N PH+G+ +++ AD AR+ R+ +D L+ GTDE+G A Sbjct: 2 KKKNLITAALPYVNNIPHLGNLVQVLSADAFARYSRMMDIDTLYVCGTDEYGTATETKAL 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 T + ++ + + + +I +D F RTT K H T + L+ K+ G I Sbjct: 62 IEKTTPEELCNRYYAIHKSIYEWFNIKFDIFGRTTNKSHKQTVQDLFLKLEKNGYITDKE 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN----------PVQWMEEEGYFFRLSAYQ 173 ++ +D+ + D V NA+ + P+ + + + Sbjct: 122 SEQFFCQQDQMFLADRYVTGECPNCGNNAKGDQCENCSKLLAPIDLINPKCIICKNIPII 181 Query: 174 DKLLSYYESHPEFILPIERRNEVI---------------------SFVKSGLKDLSLSRK 212 Y + P+ +NE+I +F++ GLK+ +++R Sbjct: 182 KTTKHLYINLPKI------KNELIHWMQTTEHNTNWNTNAIKTTNAFLRDGLKERAITR- 234 Query: 213 TFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGK 265 WGI +P + YVW DA Y++ T + S +W + + IGK Sbjct: 235 DLKWGIPVPKKEYENKVFYVWFDAPIGYISITKEISKDWES---WWKNNKETNLVQFIGK 291 Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 D + FH + +PA L + N + K+ S ++ ++ K SKS G I +VI + Sbjct: 292 DNILFHTVIFPAIKLGSKENWTMLGKLASSEYLNYEHLKFSKSAGIGIFGNDVITTGISA 351 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R+++ D + D +R+N++L NLV+R ++ K + I T Sbjct: 352 DIWRFYIYYNRPEKSDFQFMWDDFMERINSELIGNFSNLVNRVLTFYKKFFGDKIDT--- 408 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 E E + + + + AL +++ + ++ F ++PW+ K + P Sbjct: 409 -IEIKEDFWKEINLKYDKTLNFFKQIELKSALKEILDISRIGNKIFQDKEPWKTKDSTPK 467 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + +L + +IR L+IL+ F+P ++KI Sbjct: 468 KTKELLLNLIYLIRDLSILISPFIPHTSDKI 498 >gi|225548701|ref|ZP_03769748.1| methionyl-tRNA synthetase [Borrelia burgdorferi 94a] gi|225370731|gb|EEH00167.1| methionyl-tRNA synthetase [Borrelia burgdorferi 94a] Length = 734 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 112/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ A+ Y N PH+G+ +++ AD AR+ ++ G++ L+ GTDE+G A T Sbjct: 7 VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + + +I +D F RTT K H D + + ++ G I + ++ Sbjct: 67 PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFF 126 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +D + D + KG + NP + + + K Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186 Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223 Y P+ +E+ +N S F++ GLK+ +++R WGI +P Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276 + YVW DA Y++ T N + +W + V IGKD + FH I +P Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302 Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333 + + N + ++ S ++ ++ K SKS G I + I + D R+++ Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAISTGIPSDIWRFYIYYNR 362 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + L +RVN +L + NLV+R ++ K + +I T + + I Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++L ++ + AL +++ + S ++ F +PW+ K +P ++ + Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478 Query: 454 VIRQLAILLQAFVPKLANKI 473 +IR L+IL+ F+P+ + KI Sbjct: 479 LIRDLSILMMPFIPETSKKI 498 >gi|255261576|ref|ZP_05340918.1| methionyl-tRNA synthetase [Thalassiobium sp. R2A62] gi|255103911|gb|EET46585.1| methionyl-tRNA synthetase [Thalassiobium sp. R2A62] Length = 570 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 113/515 (21%), Positives = 215/515 (41%), Gaps = 47/515 (9%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ ARF R +VLF TDEHG AA AG Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLFARFQRARRNEVLFLCATDEHGTPAELAAAKAGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + ++A +S+D F R++ + + +++D+G I + + Sbjct: 66 PVAEYCAEMWTLQAEIAQGFRLSFDHFGRSSSDENRTLTQHFAGRLADEGLIEETVETQV 125 Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM---------------E 161 YS+ D + D E +G Q +P + E Sbjct: 126 YSIADGRFLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPADLINPYSTISGSTELEPRE 185 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI- 220 + + S +D+L ++ S ++ + + GL+D ++R DWG+ + Sbjct: 186 TKHLHLKQSKVKDQLDNWISSKKDWPILTTSIAKKWLHDGDGLQDRGITRD-LDWGVPVK 244 Query: 221 ------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD--------LHVIG 264 P + YVW DA Y+ + ++ G ++W D +G Sbjct: 245 RGADDWPGMEGKVFYVWFDAPIEYIACSQEWVAAGKGDDWERWWRTDKGADDVRYTQFMG 304 Query: 265 KDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 KD + FH + +PA ++ +N P L + S ++ + G + S S G + + +E + Sbjct: 305 KDNVPFHTLSFPATIMGSNEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALEILPS 364 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R++L+ D + + + VN DLA+ +GN VSR + IP G Sbjct: 365 DYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNFVSRVTKFTRSKFSEEIPDGGK 424 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 +ES++ + ++ M+ I ++ ++ ++ + Y PW KT P+ Sbjct: 425 NGPEEESLIQEITTRVRAYEGYMEAMEIRKSANELRAIWVAGNEYLQTVAPWSTFKTAPE 484 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +A+ + + + +IR A+L F+P + ++ + Sbjct: 485 QAAAQIRLALNLIRVYAVLSAPFIPDASAELMQAM 519 >gi|15236350|ref|NP_193114.1| methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative [Arabidopsis thaliana] gi|12230648|sp|Q9SVN5|SYM_ARATH RecName: Full=Probable methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|4455307|emb|CAB36842.1| methionyl-tRNA synthetase-like protein [Arabidopsis thaliana] gi|7268082|emb|CAB78420.1| methionyl-tRNA synthetase-like protein [Arabidopsis thaliana] gi|17381106|gb|AAL36365.1| putative methionyl-tRNA synthetase [Arabidopsis thaliana] gi|20259315|gb|AAM14393.1| putative methionyl-tRNA synthetase [Arabidopsis thaliana] Length = 797 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 122/520 (23%), Positives = 225/520 (43%), Gaps = 51/520 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV AR+ RL G + ++ GTDE+G A Sbjct: 16 KRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIYICGTDEYGTATETKA 75 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T K D+ +++ D IS+D F RT+ + C+ ++ K+ D + + Sbjct: 76 LEENCTPKEICDKYHAIHKEVYDWFGISFDKFGRTSTPEQTEVCQAIFNKLWDNKWLSEN 135 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 Y + + D V + N E+ G + +D ++ Sbjct: 136 TMQQLYCDTCKKFLADRLVEGSCPFEGCNYDSARGDQCEKCGKLLNPTELKDPKCKVCQN 195 Query: 183 HPE-------FI-LPI--ERRNEVI------------------SFVKSGLKDLSLSRKTF 214 P FI LP+ +R I ++++ GL+ ++R Sbjct: 196 TPRIRDTDHLFIELPLLKDRLEAYIKKTSVTGSWSQNAIQTTNAWLRDGLRQRCITRD-L 254 Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDI 267 WG+ +P + + YVW DA Y++ T + K+W P ++ + +GKD Sbjct: 255 KWGVPVPHEKYKDKVFYVWFDAPIGYVSITSCYTS---EWEKWWKNPENVELYQFMGKDN 311 Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDA 324 + FH + +P+ L N L K + ++ ++ K SKS G + +V + + V+ Sbjct: 312 VPFHTVMFPSTQLGTEENWTLMKTISVTEYLNYEDGKFSKSKGVGVFGNDVKDTNIPVEV 371 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPTP 380 RY+L+ D + L+ ++N +L + +GN V+R +S I K Y +IP Sbjct: 372 WRYYLLTNRPEVSDTSFSWTDLQAKLNGELLSNLGNFVNRVLSFIAKPDNAGYGSVIPD- 430 Query: 381 GAFTESDESILSVCSRV---LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 ES S+ +V + E E M+ + + L + + SE + Y A + W+L Sbjct: 431 AHDAESHSLTKSLAEKVEKFVAEYVEAMEKVKLKQGLKTAMLISSEGNYYLQASQFWKLY 490 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K + + V+ ++ LA LL+ F+P + ++F L Sbjct: 491 KEDKPLCAVVIRTAAGLVHLLAQLLEPFMPSFSCEVFKQL 530 >gi|312149641|gb|ADQ29712.1| methionyl-tRNA synthetase [Borrelia burgdorferi N40] Length = 734 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 111/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ A+ Y N PH+G+ +++ AD AR+ ++ G++ L+ GTDE+G A T Sbjct: 7 VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + + +I +D F RTT K H D + + ++ G I + ++ Sbjct: 67 PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFF 126 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +D + D + KG + NP + + + K Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186 Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223 Y P+ +E+ +N S F++ GLK+ +++R WGI +P Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWP 276 + YVW DA Y++ T N + +W + + IGKD + FH I +P Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302 Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333 + + N + ++ S ++ ++ K SKS G I + I + D R+++ Sbjct: 303 CIEIGSQENWTMLNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + L +RVN +L + NLV+R ++ K + +I T + + I Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++L ++ + AL +++ + S ++ F +PW+ K +P ++ + Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478 Query: 454 VIRQLAILLQAFVPKLANKI 473 +IR L+IL+ F+P+ + KI Sbjct: 479 LIRDLSILMMPFIPETSKKI 498 >gi|224532738|ref|ZP_03673355.1| methionine--tRNA ligase [Borrelia burgdorferi WI91-23] gi|224512356|gb|EEF82740.1| methionine--tRNA ligase [Borrelia burgdorferi WI91-23] Length = 734 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 112/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ A+ Y N PH+G+ +++ AD AR+ ++ G++ L+ GTDE+G A T Sbjct: 7 VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + + +I +D F RTT K H D + + ++ G I + ++ Sbjct: 67 PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFF 126 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +D + D + KG + NP + + + K Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186 Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223 Y P+ +E+ +N S F++ GLK+ +++R WGI +P Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276 + YVW DA Y++ T N + +W + V IGKD + FH I +P Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302 Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333 + + N + ++ S ++ ++ K SKS G I + I + D R+++ Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + L +RVN +L + NLV+R ++ K + +I T + + I Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++L ++ + AL +++ + S ++ F +PW+ K +P ++ + Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478 Query: 454 VIRQLAILLQAFVPKLANKI 473 +IR L+IL+ F+P+ + KI Sbjct: 479 LIRDLSILMMPFIPETSKKI 498 >gi|226321893|ref|ZP_03797419.1| methionyl-tRNA synthetase [Borrelia burgdorferi Bol26] gi|226233082|gb|EEH31835.1| methionyl-tRNA synthetase [Borrelia burgdorferi Bol26] Length = 734 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 112/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ A+ Y N PH+G+ +++ AD AR+ ++ G++ L+ GTDE+G A T Sbjct: 7 VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + + +I +D F RTT K H D + + ++ G I + ++ Sbjct: 67 PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFF 126 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +D + D + KG + NP + + + K Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186 Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223 Y P+ +E+ +N S F++ GLK+ +++R WGI +P Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276 + YVW DA Y++ T N + +W + V IGKD + FH I +P Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302 Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333 + + N + ++ S ++ ++ K SKS G I + I + D R+++ Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + L +RVN +L + NLV+R ++ K + +I T + + I Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++L ++ + AL +++ + S ++ F +PW+ K +P ++ + Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478 Query: 454 VIRQLAILLQAFVPKLANKI 473 +IR L+IL+ F+P+ + KI Sbjct: 479 LIRDLSILMMPFIPETSKKI 498 >gi|126731060|ref|ZP_01746868.1| methionyl-tRNA synthetase [Sagittula stellata E-37] gi|126708362|gb|EBA07420.1| methionyl-tRNA synthetase [Sagittula stellata E-37] Length = 570 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 117/526 (22%), Positives = 220/526 (41%), Gaps = 57/526 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R G +VL+ TDEHG AA AG Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLYARYLRARGHEVLYLCATDEHGTPAELAAAKAGK 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + +A+ +S+D F R++ + + K + ++G I + + Sbjct: 66 PVADYCAEMHEVQAKIAEGFRLSFDHFGRSSSDANKRLTQHFAKVLDEQGLIRETSETQM 125 Query: 128 YSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV---------------QWME 161 YS D + D + +G Q +PV + E Sbjct: 126 YSKADGRFLPDRYIEGTCPNCGFDSARGDQCDNCTKQLDPVDLINPHSTISGSTDLEMRE 185 Query: 162 EEGYFFRLSAYQDKLLSYY---ESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDW 216 + + R SA +D+L + E P I ++ N+ GL+D ++R DW Sbjct: 186 TKHLYLRQSAMKDELEKWIDTREGWPVLTTSIAKKWLND-----GDGLQDRGITRD-LDW 239 Query: 217 GIKI-------PDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSK-AKFWPAD-------- 259 G+ + P + YVW DA Y+ ++D G+ ++W D Sbjct: 240 GVPVMKGDQPWPGMEGKVFYVWFDAPIEYIACGQEWVDAGKGTDWERWWRTDKGADDVRY 299 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 +GKD + FH + +P +L + P L + S ++ + G + S S G + + + Sbjct: 300 TQFMGKDNVPFHTLSFPVTILGSGEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQAL 359 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E + D R++L+ + D + + + VN DLA+ +GN SR + + Sbjct: 360 EILPADYWRWWLLSHVPETSDAEFTWESFQSGVNKDLADVLGNFASRVTKFCRSKFSEAV 419 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P G ++ +++ + ++E +M+ I +A A + + Y PW Sbjct: 420 PEGGTPGAAEAKLIADLTAKVREYETHMEAIEIRKAAAALRGAWVLGNEYLQEVAPWTTF 479 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 KT+P++A+ + + + +IR A++ + F+P + + DE+ Sbjct: 480 KTDPEQAAMQIRLALNLIRLYAVISRPFIPDACADLLAAMQTDDES 525 >gi|224534740|ref|ZP_03675312.1| methionine--tRNA ligase [Borrelia spielmanii A14S] gi|224513988|gb|EEF84310.1| methionine--tRNA ligase [Borrelia spielmanii A14S] Length = 724 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 111/500 (22%), Positives = 216/500 (43%), Gaps = 43/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ A+ Y N PH+G+ +++ AD AR+ ++ G+ L+ GTDE+G A Sbjct: 7 VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIKTLYVCGTDEYGTATETKALIEKTA 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + + +I +D F RTT K H + + + K+ G I + ++ Sbjct: 67 PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKHHQEIVQNFFLKLEKNGYIKERETEQFF 126 Query: 129 SLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +D + D V KG + + NP+ + + + K Sbjct: 127 CNKDSIFLADRYVIGECPECQSTAKGDQCENCSKLLNPIDLINPKCIICKNKPILKKTNH 186 Query: 179 YYESHPEFILPIER--RNEVI-------------SFVKSGLKDLSLSRKTFDWGIKIPDD 223 Y P+ +E+ +N +F++ GLK+ +++R WGI +P Sbjct: 187 LYIDLPKIKTKLEKWIKNSTTNKNWNTNALKMTNAFLRDGLKERAITR-DLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276 + YVW DAL Y++ T N + +W + V IGKD + FH I +P Sbjct: 246 GYENKVFYVWFDALIGYISIT---KNIVKNWESWWKNNEQVNLVQFIGKDNILFHTIIFP 302 Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333 + + N + ++ S ++ ++ K SKS G I + I + D R+++ Sbjct: 303 CIEIGSKENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAISTGIPSDVWRFYIYYNR 362 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + L +RVN +L + NLV+R ++ K + ++ T + + I Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQKKFFGDILETIEIQHKFWKQITPK 422 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++L ++ + AL +++ + S ++ F +PW+ K + P ++ + Sbjct: 423 YNKILNLFKKTE----LKSALKEILQISSFGNKIFQDNEPWKKKDSAPQETKELILNLIY 478 Query: 454 VIRQLAILLQAFVPKLANKI 473 +IR L+IL+ F+P+ + KI Sbjct: 479 LIRDLSILMMPFIPETSKKI 498 >gi|110289054|gb|ABB47540.2| methionyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica Group] Length = 540 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 124/524 (23%), Positives = 232/524 (44%), Gaps = 59/524 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + +++A+ Y N PH+G+ ++ AD AR+ RL G +VL+ GTDE+G A Sbjct: 14 RRNVLVTSALPYVNNVPHLGNIIGCVLSADAFARYCRLRGHNVLYVCGTDEYGTATETKA 73 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G + + D+ +++ + DIS+D F RT+ + + C+ ++ K+ D + + Sbjct: 74 MEEGCSPREICDKYHAIHKEVYEWFDISFDIFGRTSSPQQTEVCQDIFLKLLDNNWLSEN 133 Query: 123 CYSGWYSLRDEAYYNDD--EVYKGADGQYYNAQH-----------------NPVQWM--- 160 Y + + D E Y +G Y++ NP + Sbjct: 134 TMQQLYCNSCQRFLADRLVEGYCPTEGCNYDSARGDQCEKCGKLLNSTELVNPKCKVCGS 193 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI----SFVKSGLKDLSLSR 211 + + F L ++KL Y + E L I +++K GLK ++R Sbjct: 194 TPCVRDTDHLFLELPLLREKLEKYID---ETSLTGSWSQNAIHATNAWLKEGLKPRCITR 250 Query: 212 KTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKD 266 WG+ +P + + YVW DA Y++ T P+ K P ++ + +GKD Sbjct: 251 D-LKWGVPVPHEKYKDKVFYVWFDAPIGYISITACY-TPEWEKWWKNPENVELYQFMGKD 308 Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEE 319 + FH + +P+ LL N L K + ++ ++ K SK+ GN + E Sbjct: 309 NVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKTKGIGVFGNDAKSTNIPPE 368 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDG 375 V RY+L+ D + L+ + N +L N +GN ++R +S I K Y Sbjct: 369 V----WRYYLLTNRPEASDTLFTWTDLQAKCNNELLNNLGNFINRVLSFIAKPEGTGYGS 424 Query: 376 MIP-TPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 ++P +P + + +S+ +++ + + M I + L +++ SE + Y + Sbjct: 425 VVPDSPDVDSHALTQSLAETVGKLIDQYIDAMDKVKIKQGLKIAMAISSEGNAYLQESQF 484 Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 W+L K +P +TV+ +V ++ LA LL+ F+P + + +L Sbjct: 485 WKLYKQDPASCATVMKTSVGIVYLLACLLEPFMPTFSKDVCLLL 528 >gi|224533669|ref|ZP_03674258.1| methionyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a] gi|224513342|gb|EEF83704.1| methionyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a] Length = 734 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 112/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ A+ Y N PH+G+ +++ AD AR+ ++ G++ L+ GTDE+G A T Sbjct: 7 VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + + +I +D F RTT K H D + + ++ G I + ++ Sbjct: 67 PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFF 126 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +D + D + KG + NP + + + K Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186 Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223 Y P+ +E+ +N S F++ GLK+ +++R WGI +P Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276 + YVW DA Y++ T N + +W + V IGKD + FH I +P Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302 Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333 + + N + ++ S ++ ++ K SKS G I + I + D R+++ Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + L +RVN +L + NLV+R ++ K + +I T + + I Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++L ++ + AL +++ + S ++ F +PW+ K +P ++ + Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478 Query: 454 VIRQLAILLQAFVPKLANKI 473 +IR L+IL+ F+P+ + KI Sbjct: 479 LIRDLSILMMPFIPETSKKI 498 >gi|224055851|ref|XP_002298685.1| predicted protein [Populus trichocarpa] gi|222845943|gb|EEE83490.1| predicted protein [Populus trichocarpa] Length = 805 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 139/563 (24%), Positives = 247/563 (43%), Gaps = 63/563 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV AR+ RL G + ++ GTDE+G A Sbjct: 16 KRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETKA 75 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T K D+ R++ +IS+D+F RT+ + + C+ ++KK+ + + + Sbjct: 76 MEENSTPKQICDKYYAIHREVYKWFNISFDEFGRTSSPQQTEICQAIFKKLLENNWLSEN 135 Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-QYYNAQH--NPVQWM--------- 160 Y E + D V Y A G Q N NP + + Sbjct: 136 SMQQLYCDTCERFLADRLVEGNCPTEGCNYDSARGDQCENCGKLLNPTELINPRCKQCKN 195 Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---FVKSGLKDLSLSRK 212 + F L +DKL+ Y ES + +N + + ++K GLK ++R Sbjct: 196 TPRIRDTNHLFLELPLLKDKLVHYIESTS--VAGGWSQNAIQTTNAWLKEGLKPRCITRD 253 Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKDI 267 WG+ +P + + YVW DA Y++ T PD K P ++ + +GKD Sbjct: 254 -LKWGVPVPLEEFKDKVFYVWFDAPIGYVSITSCY-TPDWEKWWKNPENVELYQFMGKDN 311 Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324 + FH + +P+ LL N L K + ++ ++ K SKS G V + V+ Sbjct: 312 VPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDAKDTNIPVEV 371 Query: 325 LRYFLVRE-----IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDG 375 RY+L+ + D + L+ + N +L N +GN ++R +S + K Y Sbjct: 372 WRYYLLTNRPEAILLKVSDTLFTWSDLQAKSNNELLNNLGNFINRVLSFLAKPPGSGYGS 431 Query: 376 MIP-TPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 +IP PGA + + + +++ E M+ + L +S+ SE + Y + Sbjct: 432 VIPDAPGAGSHPLTNKLAEEVGKYVEQYLEAMEKVKLKHGLKTAMSISSEGNAYLQESQF 491 Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF----QSL 489 W L K + S V+ ++ ++ LA LL+ F+P + ++F L + E + Sbjct: 492 WRLYKEDQPSCSIVIKTSLGLVYLLACLLEPFMPSFSVEVFKQLNMPPEQASLCDEKGDM 551 Query: 490 DQRLKPGFML---HK--TFDPIF 507 D+ +P +L HK T +P+F Sbjct: 552 DKAKRPWEILPAGHKIGTPEPLF 574 >gi|312074907|ref|XP_003140180.1| hypothetical protein LOAG_04595 [Loa loa] gi|307764654|gb|EFO23888.1| hypothetical protein LOAG_04595 [Loa loa] Length = 583 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 126/516 (24%), Positives = 231/516 (44%), Gaps = 50/516 (9%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + + I++A+ Y N PH+G+ ++ AD +R+ L G LF GTDE+G + A Sbjct: 7 KNILITSALPYVNNVPHLGNIIGCVLSADAFSRYCYLKGWRRLFICGTDEYGTATERKAV 66 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+ + +I +D F RTT + + + ++ K+ G Sbjct: 67 QEGLTPRQICDKYHAIHAKIYKWFNIDFDRFGRTTTQHQTELTQEIFLKLHKNGFTSTDV 126 Query: 124 YSGWYSLRDEAYYNDDEVY-----------KG----ADGQYYNAQH--NPVQWMEEEGYF 166 + + D V+ +G A G+ NA NP + + Sbjct: 127 VDQLHCDNCNRFLADRFVFGECPYCHFDDARGDQCDACGKLINAVEIINPRCDLCKATPV 186 Query: 167 FRLSAY----QDKLLSYYESHPEFILPIERRN---EVISFVKSGLKDLSLSRKT----FD 215 + S++ DKL E H L + + IS KS LK L R+ Sbjct: 187 VKPSSHIFLHLDKLAGEVEKHLNKQLSSGKNHWSANAISIAKSWLKG-GLERRCITRDLK 245 Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA--DLH-VIGKDI--- 267 WG+ +P D + YVW DA YL+ T D S+ P+ DL+ +GK I Sbjct: 246 WGVPVPIDSFSNKVFYVWFDAPIGYLSITKEYLGEDWSQWWKNPSIVDLYNFVGKTIFPF 305 Query: 268 ---LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 + FHA+ +PA + N + ++ + ++ ++ K SKS G + ++ E G+ Sbjct: 306 HDNVAFHAVMFPATQIGTGDNYTMVNRLCATEYLNYESTKFSKSRGTGVFG-DMAAETGI 364 Query: 323 DA--LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 DA R++L+ +D + D +VN +L N +GN V+R++ + K ++G++P Sbjct: 365 DADIWRFYLLYIRPETQDTSFSWDDFSLKVNTELLNNLGNFVNRALMFLSKYFNGVVPDM 424 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 E D+++L+ + L + + + + + +V+S+ + Y + +PW L K N Sbjct: 425 -YLEEEDKALLAQVASDLNDFDSCLSSVKLRDGIVKVLSISRHGNLYMQSTQPWVLLKGN 483 Query: 441 PD---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + RA TV+ V + +A+++ ++P ++ KI Sbjct: 484 ENDRRRAGTVIGVVANLTYLIAVMIYPYMPSISEKI 519 >gi|168032815|ref|XP_001768913.1| predicted protein [Physcomitrella patens subsp. patens] gi|162679825|gb|EDQ66267.1| predicted protein [Physcomitrella patens subsp. patens] Length = 811 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 132/566 (23%), Positives = 248/566 (43%), Gaps = 73/566 (12%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + +++A+ Y N PH+G+ ++ ADV AR+ R G +V++ GTDE+G A Sbjct: 24 KRNIMVTSALPYVNNVPHLGNIIGCVLSADVYARYCRRRGYNVIYMCGTDEYGTATETRA 83 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+T + D+ RD+ + DI +D F RT+ + + + ++ + +K + + Sbjct: 84 MEEGLTPREICDKYHAIHRDIYEWFDIDFDKFGRTSTPQQTEIAQAIFMSLYEKKRLNEN 143 Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-------QYYNAQH----------N 155 Y + D V Y+ A G + NA N Sbjct: 144 TMIQPYCTTCNRFLADRLVEGTCPTPGCGYEDARGDQCDLCGKLLNADDLINPRCKVCGN 203 Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPE----FILPIERRNEVISFVKSGLKDLSLSR 211 + + F L D+L SY + + I++ N ++++ GLK+ ++R Sbjct: 204 TPEKRPTDHLFLDLPGLNDQLQSYINNTSKRGGWSSNSIQQTN---AWIRDGLKERCITR 260 Query: 212 KTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVI---G 264 WG+ +P + + YVW DA Y++ T N K+W P D+ ++ G Sbjct: 261 D-LKWGVPVPLEKYKHKVFYVWFDAPIGYISITA---NYSPEWEKWWKSPEDVELVQFMG 316 Query: 265 KDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVG 321 KD + FH + +P+ LL P L K + ++ ++ K SKS G + +V + Sbjct: 317 KDNVPFHTVIFPSTLLGTEEPWTLMKTISVTEYLNYESGKFSKSRGVGVFGNDVKSTNIP 376 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-----DYDGM 376 V+ RY+L+ D + L+ + N +L +GN V R++S + K + + Sbjct: 377 VEVWRYYLLTNRPEVSDTLFTWVDLQAKQNNELLKNLGNFVHRTLSFLAKPLGEGGFGKV 436 Query: 377 IPTPGAFTESDES---ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 +P G E + + + V S V + I+ +M+ + L + + S ++Y + Sbjct: 437 VPEVGNPEEHELTRNLAIKVKSTVDEYIK-SMEAVKLKGGLKAAMQVSSLGNQYLQDSQF 495 Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF-------DILFVADENRCF 486 W+L K + + VL +V ++ LA LL+ F+P ++K+ L + +EN Sbjct: 496 WKLYKEDKPSCAIVLKTSVGLVHLLATLLEPFMPSFSHKVLAQLNLPVSTLSLVEEN--- 552 Query: 487 QSLDQRLKPGFMLHK-----TFDPIF 507 L++ KP ++ + +PIF Sbjct: 553 DELERAYKPWMLVQSGHSIGSPEPIF 578 >gi|222873365|gb|EEF10496.1| predicted protein [Populus trichocarpa] Length = 371 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 102/364 (28%), Positives = 167/364 (45%), Gaps = 46/364 (12%) Query: 52 DEHGQKIAKAAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILW 110 D HG I A GV ++ D ++ D + +IS+D++ T + + ++ Sbjct: 1 DAHGTPIMLKADQMGVKPEQLIADVQQKHMADFSG-FNISFDNYHSTHSDENRELVEAIY 59 Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQ 158 K+ G I S + ++A + D KG A+ QY +A ++P++ Sbjct: 60 HKLKQNGFIKTRIISQLFD-PEKAMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPIE 118 Query: 159 WM--------------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204 + E E +FF L A++ L + S L E N++ + ++GL Sbjct: 119 LISPRSTVSGATPVLKESEHFFFDLPAFESMLTEWIRSGS---LQQEVANKMQEWFEAGL 175 Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPAD 259 + +SR +G KIP+ YVW+DA Y+ + N G K+ FW + Sbjct: 176 QQWDISRDAPYFGFKIPNTDNKYFYVWLDAPIGYMAS---FKNLCGKKSGIDFDSFWSKE 232 Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 H IGKDI+ FH+++WPA L A+L P +F HG++ GEK+SKS G I Sbjct: 233 SHAELYHFIGKDIMYFHSLFWPAMLDGASLRKPNNIFVHGYVTVNGEKMSKSRGTFIQAA 292 Query: 315 EVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++ + + LRY+ ++ D + D +RVN DL N + NL SR+ S I K + Sbjct: 293 TYLKYLDPECLRYYYAAKLGSRIDDLDLNLDDFVQRVNTDLVNKLVNLASRNASFIQKRF 352 Query: 374 DGMI 377 DG + Sbjct: 353 DGKL 356 >gi|323651384|gb|ADX97538.1| methionyl-tRNA synthetase [Terra1 virus] Length = 546 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 128/514 (24%), Positives = 225/514 (43%), Gaps = 65/514 (12%) Query: 6 KLYISTAIAYPN-AQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 K +I++A+ YPN A PH+G+ +++ DV ARF R +V++ +GTDE+G A+ Sbjct: 2 KYFITSALPYPNNASPHLGNLIGALLSGDVYARFKREQHHEVIYLSGTDEYGTTTMIKAR 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT + D+ + + D +I +D F RT+ ++ + ++ + G I + Sbjct: 62 QEGVTCRELCDKYFELHKKVYDWFNIQFDIFGRTSTEKQTEITHEIFTGLYHNGFIEEKN 121 Query: 124 YSGWYSLRDEAYYNDDEV-----YKGADG--------QYYNAQH--------NPVQWMEE 162 + Y + Y D V Y G Q QH NP + + Sbjct: 122 STQMYCDTCQLYLADTYVKGTCYYDYCQGKNIITNGDQCEICQHMIEVTKLINPFCSICK 181 Query: 163 EGYFFR----LSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWG 217 R L DKL + E++ + N V +++ +GL ++R WG Sbjct: 182 TTPVIRNTQHLYLQLDKLTNQIENYLDKTNFKSSVNSVAKAWLNTGLTSRCITRD-LSWG 240 Query: 218 IKIPDD--------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI---GKD 266 IP+ + YVW DA Y + L N ++ +D++ I GKD Sbjct: 241 TPIPNGIDDVIDKYSDKVFYVWFDAPIGYYSI---LANAKPDWREWLNSDVNWISTQGKD 297 Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEE 319 + FH I +PA +L + LPL ++ S ++L++GEK SKS G+ + I + Sbjct: 298 NIPFHTIMFPASILGSGVKLPLINEICSTDYLLYEGEKFSKSNNCGLFGDQVMKISSELD 357 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 + D R++L++ +D ++ + +DL N IGNL++R S++ K Sbjct: 358 ITEDYWRFYLMKIRPETQDSSFNLKDFVTCIKSDLVNNIGNLINRYFSLVKK-------- 409 Query: 380 PGAFTESDESILSVCSRVLQEIREN---MQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 + +E + + +++ I E M N AL + + ++Y +PW+L Sbjct: 410 ----LDINEFTVDIPVDIIEYITEYVDLMNNFKFREALKLCLKISDYGNKYIQTNRPWKL 465 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 T+ A VL + + L LL+ F+PK + Sbjct: 466 LSTDIKTAEHVLSIAGMICWILLSLLKPFIPKTS 499 >gi|208780529|ref|ZP_03247869.1| methionyl-tRNA synthetase [Francisella novicida FTG] gi|208743675|gb|EDZ89979.1| methionyl-tRNA synthetase [Francisella novicida FTG] Length = 619 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 111/460 (24%), Positives = 209/460 (45%), Gaps = 49/460 (10%) Query: 62 AQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A++ G+T + V + S R+ +D D +I++D++ T + + ++ K+++K I Sbjct: 4 AKSLGITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLIS 62 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------- 161 K + Y + + D V KG A+ QY A ++P + + Sbjct: 63 KKAIAQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISG 121 Query: 162 -------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E +FF L A + + + ES+ +L E N++ + + GL+ +SR Sbjct: 122 QSPIQKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAP 179 Query: 215 DWGIKIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW-----PADL-HVIGKD 266 +G IP + Q YVW+DA Y+ + Y + + + FW ++L H IGKD Sbjct: 180 YFGFAIPGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKD 239 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L S P VF++GF+ G+K+SKS G I ++ + LR Sbjct: 240 IIYFHALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLR 299 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ + D + + + N+D+ + N+ SR I K +D + + F Sbjct: 300 YYFASRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF-- 356 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443 D+ + S S+ I + + + A+ +++L + +++ D KPW+L K + Sbjct: 357 -DQELESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQK 415 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480 V + + + L L+ +P + A + +I F++ Sbjct: 416 VHQVCSQGINMFKVLIAYLKPIIPSIVAEAERFLNIQFIS 455 >gi|323651382|gb|ADX97537.1| methionyl-tRNA synthetase [Courdo11 virus] Length = 546 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 126/514 (24%), Positives = 223/514 (43%), Gaps = 65/514 (12%) Query: 6 KLYISTAIAYPN-AQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 K +I++A+ YPN A PH+G+ +++ DV ARF R +V++ +GTDE+G A+ Sbjct: 2 KYFITSALPYPNNASPHLGNLIGALLSGDVYARFKREQHHEVIYLSGTDEYGTTTMIKAR 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GVT + D+ + + D +I +D F RT+ ++ + ++ + G I + Sbjct: 62 QEGVTCRELCDKYFELHKKVYDWFNIQFDIFGRTSTEKQTEITHEIFTGLYHNGFIEEKN 121 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYN-------------AQH--------NPVQWMEE 162 + Y + Y D V Y QH NP + + Sbjct: 122 STQMYCDTCQLYLADTYVKGTCYHDYCQGKNIITNGDQCEICQHMIEVTKLINPFCSICK 181 Query: 163 EGYFFR----LSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWG 217 R L DKL + E++ + N V +++ +GL ++R WG Sbjct: 182 TTPVIRNTQHLYLQLDKLTNQIENYLDKTNFKSSVNSVAKAWLNTGLTSRCITRD-LSWG 240 Query: 218 IKIPDD--------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI---GKD 266 IP+ + YVW DA Y + L N ++ +D++ I GKD Sbjct: 241 TPIPNGIDDVIDKYSDKVFYVWFDAPIGYYSI---LANAKPDWREWLNSDVNWISTQGKD 297 Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEE 319 + FH I +PA +L + LPL ++ S ++L++GEK SKS G+ + I + Sbjct: 298 NIPFHTIMFPASILGSGVKLPLINEICSTDYLLYEGEKFSKSNNCGLFGDQVMKISSELD 357 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 + D R++L++ +D ++ + +DL N IGNL++R S++ K Sbjct: 358 ITEDYWRFYLMKIRPETQDSSFNLKDFVTCIKSDLVNNIGNLINRYFSLVKK-------- 409 Query: 380 PGAFTESDESILSVCSRVLQEIREN---MQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 + +E + + +++ I E M N AL + + ++Y +PW+L Sbjct: 410 ----LDVNEFTVDIPVDIIEYITEYVDLMNNFKFREALKLCLKISDYGNKYIQTNRPWKL 465 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 T+ A VL + + L LL+ F+PK + Sbjct: 466 LSTDIKTAEHVLSIAGMICWILLSLLKPFIPKTS 499 >gi|307204861|gb|EFN83419.1| Methionyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator] Length = 831 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 127/524 (24%), Positives = 234/524 (44%), Gaps = 50/524 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + I++A+ Y N PH+G+ ++ AD+ AR+ R + L+ GTDE+G Sbjct: 253 KGERNVLITSALPYVNNVPHLGNIIGCVLSADIFARYCRQRNYNTLYICGTDEYGTATEA 312 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A T + D+ D+ I +D F RTT + + + KI +G I Sbjct: 313 KALQEKTTPQAICDKFFDIHNDVYRWFGIGFDYFGRTTTPEQTEIVQSFFLKIKSQGYIL 372 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADG-QYYNAQ----------HNPVQWMEEEG----- 164 + + + D V G +Y +A+ N V+ +E Sbjct: 373 NETVEQLHCELCDRFLADRFVEGTCPGCKYEDARGDQCDGCGHLMNAVELVEPRCKICNT 432 Query: 165 ---------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS--FVKSGLKDLSLSRKT 213 +F L +D+L + ++ + + + V+S +++ GLK ++R Sbjct: 433 KPVVKNSVQFFLDLPKIEDRLKQWSDTVSKGWSSVAK---VVSKSWLRDGLKPRCITRD- 488 Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHV-----IGK 265 WGI +P + + YVW DA Y++ T K+W P D V + K Sbjct: 489 LKWGIPVPVNGFENKVFYVWFDAPFGYISITKRYTK---EYEKWWKPQDTKVDLCQFMAK 545 Query: 266 DILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 D + FHAI +PA LL+AN L K + + ++ ++ +K SKS + + + + Sbjct: 546 DNVPFHAIMFPACLLAANQNNTLIKYLMATEYLNYEDKKFSKSRSVGVFGTDARDTGIPA 605 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R++L +D ++ L + N++L N +GN V+R++ K +D +P P Sbjct: 606 DVWRFYLAYIRPETQDSNFNWIDLATKNNSELLNNLGNFVNRALMFSEKFFDCNVP-PTK 664 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKTNP 441 E+D ++L++ R L M+ + L ++++ ++Y Q+PW ++K T+ Sbjct: 665 LEEADWTVLALAQRELTSYINAMEQAKLRDGLKHILAISKHGNQYMQFQQPWVKIKGTDD 724 Query: 442 D--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 D RA TV+ + + L+ LL F+P A ++ L ++++N Sbjct: 725 DKNRAGTVVAICCNLACLLSALLAPFMPATAKQLRSQLGLSNKN 768 >gi|290447949|emb|CBK19452.1| C. elegans protein F58B3.5b, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 676 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 117/510 (22%), Positives = 215/510 (42%), Gaps = 42/510 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I+ A+ Y N PH+G+ ++ ADV AR+ L G + GTDE+G A Sbjct: 34 KRNILITAALPYVNNVPHLGNIIGCVLSADVFARYCNLRGHQTFYVGGTDEYGTATETKA 93 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G T + D+ + + + I + F RTT + C+ ++ K+ G Sbjct: 94 LQEGCTPRELCDKYHAIHKGIYEWFGIDFSHFGRTTTDHQTEICQDMFLKLHKNGYTSSQ 153 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWMEEEGYFFRLSA 171 Y + E + D V Y A G + N V + + + + + Sbjct: 154 SVDQLYCNQCEKFLADRFVTGTCPMCAYDDARGDQCDGCGKLINAVDLKDAKCHMCKATP 213 Query: 172 ----------YQDKLLSYYESHPEFILPIE----RRNEV---ISFVKSGLKDLSLSRKTF 214 DKL H + L E N V +++K GL ++R Sbjct: 214 EVKQSTHIFLSLDKLQQKTTEHLDRELAKEDNRWSSNAVGITKAWMKLGLDPRCITRD-L 272 Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKDILR 269 WG +P D + + YVW DA YL+ T + + +K P ++ + +GKD + Sbjct: 273 KWGTAVPLDGFEKKVFYVWFDAPIGYLSITKCVLGDNWTKWWKNPENVELFNFVGKDNVA 332 Query: 270 FHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGN-VIDPIEVIEEVGVDALR 326 FHA+ +P L AN + + + ++ ++ K SKS G + E+ D R Sbjct: 333 FHAVMFPCSQLGANDNYTVVNNLCATEYLNYEDTKFSKSRGTGIFGDAAQGTEIPADIWR 392 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 ++L+ +D + D +VN++L N +GN ++R++S + + G++P T Sbjct: 393 FYLLYMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVANSFGGVVPEMN-LTND 451 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---R 443 D +LS + + + A+ ++++ ++Y AQ PW L K + + R Sbjct: 452 DAEVLSEIHNECMQWDKQFDGVHLKDAVKTILNVSRLGNQYMQAQTPWVLMKKDEEGKKR 511 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 A T++ V + +++LL +P ++ I Sbjct: 512 AGTIIGVAANIAYHVSVLLYPIMPTISATI 541 >gi|49619159|gb|AAT68164.1| methionine-tRNA synthetase [Danio rerio] Length = 913 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 120/511 (23%), Positives = 222/511 (43%), Gaps = 47/511 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV AR+ RL G ++L+ GTDE+G A Sbjct: 261 KRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYGRLRGWNLLYICGTDEYGTATENKA 320 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + G+T + D+ + I +D F RTT + + + ++ ++ ++G + + Sbjct: 321 REEGLTPQQICDKYRCIHASIYQWFQIDFDFFGRTTTQHQTEIAQDIFWRLHERGFLLED 380 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME------------- 161 + + D V Y A G + P+ +E Sbjct: 381 TVEQLRCEGCQRFLADRFVEGECPHCRYPEARGDQCDKCGRPINAVELKNPQCKVCKETP 440 Query: 162 ----EEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + F L + L + + S R+ S+++ GLK ++R W Sbjct: 441 VIRSSKHLFLNLPKLEQDLEQWLQTSTAAGDWTTNARHITRSWLRDGLKPRCITRD-LKW 499 Query: 217 GIKIP--DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDIL 268 G +P D + + YVW DA YL+ T Y D + ++W V + KD + Sbjct: 500 GTPVPHPDYKEKVFYVWFDAPIGYLSITANYTDQWE----RWWKNPQQVELYNFMAKDNV 555 Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDAL 325 FH++ +P LL A N L + + ++ ++ K SKS G V + + D Sbjct: 556 PFHSVVFPCSLLGAQDNYTLVNNLIATEYLNYEDTKFSKSRGVGVFGDMAKDTGIPSDVW 615 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 R++L+ G+D + + + N++L N +GN ++R+ + K ++G +P + Sbjct: 616 RFYLLYLRPEGQDSAFSWTDMALKNNSELLNNLGNFINRAGMFVSKFFEGCVPEMLLNDD 675 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--- 442 I VC + Q I + + I AL ++++ ++Y +PW+ K + Sbjct: 676 DKRLIAQVCWELKQYI-QLLDKVRIRDALKCILNMSRHGNQYIQLNEPWKKIKGGAEDRC 734 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 RA TV V+V V LA +L+ F+P ++ I Sbjct: 735 RAGTVTGVSVNVACLLAAVLEPFMPTVSLSI 765 >gi|290958910|ref|YP_003490092.1| methionyl-tRNA synthetase [Streptomyces scabiei 87.22] gi|260648436|emb|CBG71547.1| putative methionyl-tRNA synthetase [Streptomyces scabiei 87.22] Length = 577 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 131/544 (24%), Positives = 232/544 (42%), Gaps = 60/544 (11%) Query: 9 ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N H+G+ M+ ADV +R+ R G DVL+ TDEHG AA+ G+ Sbjct: 6 ITSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHDVLYICATDEHGTPAELAAKERGL 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 F Q + + D +++D F R++ ++ + + +++ + G I + Sbjct: 66 PVDEFCAQAHDAQKAVYDGFALAFDYFGRSSSPQNVEITQHFARRLKENGFIEERAIRQV 125 Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWM---------------E 161 YS D + D V Y A G Q N +P + E Sbjct: 126 YSPADGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLIDPRSAISGSTDLEVRE 185 Query: 162 EEGYFFRLSAYQDKLLSYYESH----PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + F S Q ++ ++ +H P I R+ ++ GL D +++R DWG Sbjct: 186 TKHLFLLQSKLQHEVEAWVAAHEEEWPHLSSSIARK-----WLNEGLHDRAITRD-LDWG 239 Query: 218 IKIPDD--PQY-----IMYVWIDALTNYLTTTGYLDN--PDGS----KAKFWPAD----- 259 + +P D P+ + YVW DA Y+ T + PDG K+ ++ AD Sbjct: 240 VPVPADTWPELAAEGKVFYVWFDAPIEYIGATKEWSDAAPDGEKRDWKSWWYEADGGDHP 299 Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPI 314 + KD + FH + +PA L P K V S ++ + G K S S + Sbjct: 300 VRYTQFMAKDNVPFHTVMFPATELGIREPWKKVDYVKSFNWLTYYGGKFSTSQKRGVFTD 359 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374 + +E + D RYFL+ D + + VN DLA+ +GN V+R +S K + Sbjct: 360 QALEILPADYWRYFLIANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFG 419 Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 +P A E++ + +R+L E M+ +A A + +L S + Y + + PW Sbjct: 420 DEVPAGAAAGEAETRLGEEIARLLAEYEAQMEALQFRKAAAALRALWSAGNSYLEEKAPW 479 Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494 KT+ D A+ L + +I +++ + F+P + + + D+ + + ++ Sbjct: 480 LEIKTDQDAAALTLRTAMNLIHLYSVVSEPFIPASSAAMRAAFALKDDTAAWVTAEEARA 539 Query: 495 PGFM 498 F+ Sbjct: 540 LAFV 543 >gi|301761326|ref|XP_002916060.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like [Ailuropoda melanoleuca] Length = 900 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 117/508 (23%), Positives = 223/508 (43%), Gaps = 47/508 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 325 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 326 GLTPQEICDKYHAIHADIYRWFNISFDTFGRTTTPQQTKITQDIFQRLLTRGFVLQDTVE 385 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161 R + D V Y+ A G + + +E Sbjct: 386 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCPVVK 445 Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 F L + +L + ++ P R + S+++ GLK ++R WG Sbjct: 446 SSRHLFLDLPKLEKRLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGTP 504 Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKDILRFH 271 +P + + YVW DA YL+ T Y D + ++W P +++ + KD + FH Sbjct: 505 VPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVNLYQFMAKDNVPFH 560 Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328 + +P L A N L + + ++ ++ K SKS G V + + D R++ Sbjct: 561 GLVFPCSALGAEDNYTLVNHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRFY 620 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L+ G+D + + + N++L N +GN ++R+ + K + G +P T D Sbjct: 621 LLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPE-MVLTSDDR 679 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPD--RAS 445 +L+ + LQ + ++ I AL ++++ ++Y +PW+ +K + D RA Sbjct: 680 RLLAHVTLELQHYHQLLEKVRIREALRSILTISRHGNQYIQVNEPWKRIKGSEADRQRAG 739 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473 TV + V + L+++LQ ++P + I Sbjct: 740 TVTGLAVNIAALLSVMLQPYMPTVGGTI 767 >gi|149914331|ref|ZP_01902862.1| methionyl-tRNA synthetase [Roseobacter sp. AzwK-3b] gi|149811850|gb|EDM71683.1| methionyl-tRNA synthetase [Roseobacter sp. AzwK-3b] Length = 572 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 110/523 (21%), Positives = 215/523 (41%), Gaps = 53/523 (10%) Query: 9 ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++AI Y N H+G+ + AD+ AR+ R G +V+F TDEHG AA G Sbjct: 6 ITSAIPYINGIKHLGNLVGSQLPADLYARYQRARGHEVMFLCATDEHGTPAELAAAKTGE 65 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + + + D+A+ +S+D F R++ ++H + ++ G I + Sbjct: 66 PVSEYCARMHKVQSDLAEGFRLSFDHFGRSSSPQNHSLTQHFAGRLHAAGLIEEVTEKQV 125 Query: 128 YSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM---------------E 161 YS D + D + +G + Q +P + E Sbjct: 126 YSKADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTDLEVRE 185 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--LKDLSLSRKTFDWGIK 219 + R S +D+L + +S ++ PI + ++ G L+D ++R DWGI Sbjct: 186 TTHLYLRQSLMRDQLSDWIDSKSDW--PILTTSIARKWLNDGDGLQDRGITRD-LDWGIP 242 Query: 220 I-------PDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKFWPAD--------L 260 + P + YVW DA Y+ D + ++W + Sbjct: 243 VKRGDEDWPGMDGKVFYVWFDAPIEYIACAAEWAEAHSLDDSAWERWWRTERGAEDVRYT 302 Query: 261 HVIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 +GKD + FH + +PA +L + + L + S ++ + G + S S G + + +E Sbjct: 303 QFMGKDNVPFHTLSFPATILGSGEDWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQALE 362 Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 + D R++L+ D + + ++ VN DLA+ +GN VSR + +P Sbjct: 363 ILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRVTKFCRSKFGEAVP 422 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 G + +++ ++ + +M + +A ++ ++ + Y PW K Sbjct: 423 DGGEMRARERALIDDLGDRIRTYQAHMDAIEVRKASQELRAIWVAGNEYLQEAAPWSTYK 482 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 +P++A+ + + + +IR A+L F+P + + + D Sbjct: 483 EDPEQAAAQIRLALNLIRLYAVLSAPFIPDASESMLTAMHTTD 525 >gi|281353298|gb|EFB28882.1| hypothetical protein PANDA_004122 [Ailuropoda melanoleuca] Length = 864 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 117/508 (23%), Positives = 223/508 (43%), Gaps = 47/508 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 230 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 289 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 290 GLTPQEICDKYHAIHADIYRWFNISFDTFGRTTTPQQTKITQDIFQRLLTRGFVLQDTVE 349 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161 R + D V Y+ A G + + +E Sbjct: 350 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCPVVK 409 Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 F L + +L + ++ P R + S+++ GLK ++R WG Sbjct: 410 SSRHLFLDLPKLEKRLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGTP 468 Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKDILRFH 271 +P + + YVW DA YL+ T Y D + ++W P +++ + KD + FH Sbjct: 469 VPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVNLYQFMAKDNVPFH 524 Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328 + +P L A N L + + ++ ++ K SKS G V + + D R++ Sbjct: 525 GLVFPCSALGAEDNYTLVNHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRFY 584 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L+ G+D + + + N++L N +GN ++R+ + K + G +P T D Sbjct: 585 LLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPE-MVLTSDDR 643 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPD--RAS 445 +L+ + LQ + ++ I AL ++++ ++Y +PW+ +K + D RA Sbjct: 644 RLLAHVTLELQHYHQLLEKVRIREALRSILTISRHGNQYIQVNEPWKRIKGSEADRQRAG 703 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473 TV + V + L+++LQ ++P + I Sbjct: 704 TVTGLAVNIAALLSVMLQPYMPTVGGTI 731 >gi|218249303|ref|YP_002375095.1| methionyl-tRNA synthetase [Borrelia burgdorferi ZS7] gi|226695276|sp|B7J2F0|SYM_BORBZ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|218164491|gb|ACK74552.1| methionyl-tRNA synthetase [Borrelia burgdorferi ZS7] Length = 734 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 112/500 (22%), Positives = 214/500 (42%), Gaps = 43/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ A+ Y N PH+G+ +++ AD AR+ ++ G+ L+ GTDE+G A T Sbjct: 7 VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIKTLYVCGTDEYGTATETKALIENTT 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + + +I +D F RTT K H D + + ++ G I + ++ Sbjct: 67 PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFF 126 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +D + D + KG + NP + + + K Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186 Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223 Y P+ +E+ +N S F++ GLK+ +++R WGI +P Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276 + YVW DA Y++ T N + +W + V IGKD + FH I +P Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302 Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333 + + N + ++ S ++ ++ K SKS G I + I + D R+++ Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + L +RVN +L + NLV+R ++ K + +I T + + I Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++L ++ + AL +++ + S ++ F +PW+ K +P ++ + Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478 Query: 454 VIRQLAILLQAFVPKLANKI 473 +IR L+IL+ F+P+ + KI Sbjct: 479 LIRDLSILMMPFIPETSKKI 498 >gi|195941720|ref|ZP_03087102.1| methionyl-tRNA synthetase [Borrelia burgdorferi 80a] Length = 734 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 111/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ A+ Y N PH+G+ +++ AD AR+ ++ G++ L+ GTDE+G A T Sbjct: 7 VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + + +I +D F RTT K H D + + ++ G I + ++ Sbjct: 67 PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFF 126 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +D + D + KG + NP + + + K Sbjct: 127 CNKDLMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186 Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223 Y P+ +E+ +N S F++ GLK+ +++R WGI +P Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWP 276 + YVW DA Y++ T N + +W + + IGKD + FH I +P Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302 Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333 + + N + ++ S ++ ++ K SKS G I + I + D R+++ Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + L +RVN +L + NLV+R ++ K + +I T + + I Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++L ++ + AL +++ + S ++ F +PW+ K +P ++ + Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478 Query: 454 VIRQLAILLQAFVPKLANKI 473 +IR L+IL+ F+P+ + KI Sbjct: 479 LIRDLSILMMPFIPETSKKI 498 >gi|203284492|ref|YP_002222232.1| methionyl-tRNA synthetase [Borrelia duttonii Ly] gi|226710893|sp|B5RME0|SYM_BORDL RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|201083935|gb|ACH93526.1| methionyl-tRNA synthetase [Borrelia duttonii Ly] Length = 726 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 114/509 (22%), Positives = 226/509 (44%), Gaps = 51/509 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++K I+ A+ Y N PH+G+ +++ AD AR+ R+ G++ L+ GTDE+G A Sbjct: 2 KKKNLITAALPYVNNIPHLGNLVQVLSADAFARYSRMMGIETLYVCGTDEYGTATETKAL 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 T + ++ + + + +I +D F RTT K H +T + L+ K+ G I + Sbjct: 62 IEKTTPEELCNKYHAIHKSIYEWFNIKFDIFGRTTNKYHKETVQDLFLKLDKNGYITEKE 121 Query: 124 YSGWYSLRDEAYYND----------------DEVYKGADGQYYNAQHNPVQWMEEEGYFF 167 ++ +D+ + D D+ ++ N NP + + Sbjct: 122 NEQFFCQQDKMFLADRYVTGECPNCGNNTKGDQCENCSNLLVTNELLNPRCIICKNIPII 181 Query: 168 RLSAYQDKLLSYYESHPE-FILPIERRNE--------VISFVKSGLKDLSLSRKTFDWGI 218 + + + L ++ E +I I++ +F++ GLK+ +++R WGI Sbjct: 182 KKTKHLYIDLPKIKNELEHWIQQIDQNTNWNTNAIKITNAFLRDGLKERTITRD-LKWGI 240 Query: 219 KIPDDP--QYIMYVWIDALTNYLTTTGYL---------DNPDGSKAKFWPADLHVIGKDI 267 +P + YVW DA Y++ T + +N D + +F IGKD Sbjct: 241 PVPKKEYENKVFYVWFDAPIGYISITKEIIKDWESWWKNNEDTNLIQF-------IGKDN 293 Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324 + FH I +P+ L + N + K+ S ++ ++ K SKS G I +VI + D Sbjct: 294 ILFHTIMFPSIELGSQENWTMLNKLASSEYLNYENLKFSKSAGTGIFGNDVITTGIPSDV 353 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 R+++ D + D +R+N++L NL++R ++ K + I Sbjct: 354 WRFYIYYNRPEKADFQFMWDDFMERINSELIGNFSNLINRVLTFYKKFFGDKIDK----I 409 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 E +E+ + + + + + AL +++ + ++ F ++PW+ K + P Sbjct: 410 ELNENFWQIVNIKYERTINFFKQIELKAALKEILDISRIGNKIFQDKEPWKTKNSTPQTT 469 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKI 473 +L + +IR L+IL+ F+P +++I Sbjct: 470 KELLLNLIYLIRDLSILISPFMPHTSDRI 498 >gi|328676534|gb|AEB27404.1| Methionyl-tRNA synthetase [Francisella cf. novicida Fx1] Length = 619 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 110/460 (23%), Positives = 205/460 (44%), Gaps = 49/460 (10%) Query: 62 AQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A++ G+T + V + S R+ +D D +I++D++ T + + ++ K+++K I Sbjct: 4 AKSLGITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLIS 62 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------- 161 K + Y + + D V KG A+ QY A ++P + + Sbjct: 63 KKAIAQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISG 121 Query: 162 -------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E +FF L A + + + ES+ +L E N++ + + GL+ +SR Sbjct: 122 QSPIQKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAP 179 Query: 215 DWGIKIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD------LHVIGKD 266 +G IP + Q YVW+DA Y+ + Y + + + FW H IGKD Sbjct: 180 YFGFAIPATNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGNSSSESELYHFIGKD 239 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 I+ FHA++WPA L S P VF++GF+ G+K+SKS G I ++ + LR Sbjct: 240 IIYFHALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLR 299 Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 Y+ + D + + + N+D+ + N+ SR I K +D + + F Sbjct: 300 YYFASRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF-- 356 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443 D + S S+ I + + + A+ +++L + +++ D KPW+L K + Sbjct: 357 -DPELESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQK 415 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480 V + + + L L+ +P + A + +I F++ Sbjct: 416 VHQVCSQGINMFKVLIAYLKPIIPSIVAEAERFLNIQFIS 455 >gi|84000155|ref|NP_001033180.1| methionyl-tRNA synthetase, cytoplasmic [Bos taurus] gi|110816437|sp|Q2T9L8|SYMC_BOVIN RecName: Full=Methionyl-tRNA synthetase, cytoplasmic; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|83405370|gb|AAI11363.1| Methionyl-tRNA synthetase [Bos taurus] Length = 898 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 126/516 (24%), Positives = 228/516 (44%), Gaps = 63/516 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 325 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 326 GLTPQEICDKYHVIHADIYRWFNISFDFFGRTTTPQQTKITQDIFQRLLARGFVLQDTVE 385 Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156 LR E A + D +G G+ NA + P Sbjct: 386 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCRSCP 442 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP-----IERRNEVISFVKSGLKDLSLSR 211 V + F L KL + E E LP R + S+++ GLK ++R Sbjct: 443 VV-KSSQHLFLDLP----KLAARVEEWLEKTLPGSDWTANARFIIRSWLRDGLKPRCITR 497 Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---I 263 WG +P + + YVW DA YL+ T Y D + K+W P +++ + Sbjct: 498 D-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----KWWKNPEQVNLYQFM 552 Query: 264 GKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEV 320 KD + FH I +P+ L A N L + + ++ ++ K SKS G V + + Sbjct: 553 AKDNVPFHGIVFPSSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGI 612 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D R++L+ G+D + + + N++L N +GN ++R+ + K + G +P Sbjct: 613 PADIWRFYLLYNRPEGQDSAFSWTDMLFKNNSELLNNLGNFINRAGMFVSKFFGGFVPE- 671 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK-- 438 T D+ +L+ + LQ + ++ I AL ++++ ++Y +PW+ K Sbjct: 672 MVLTSDDQRLLTHITLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGG 731 Query: 439 -TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + RA TV + V + L+++LQ ++P ++ I Sbjct: 732 EADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767 >gi|324502781|gb|ADY41221.1| Methionyl-tRNA synthetase [Ascaris suum] Length = 930 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 117/524 (22%), Positives = 230/524 (43%), Gaps = 49/524 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 +K + + +++A+ Y N PH+G+ ++ ADV +R+ RL G L+ GTDE+G Sbjct: 26 VKGEKNVLVTSALPYVNNVPHLGNIIGCVLSADVFSRYCRLKGWRCLYVCGTDEYGTATE 85 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A G+T + D + + + +I +D F RTT + + L+ K+ G Sbjct: 86 MKAMQEGLTPQQICDHYYNIHKSIYEWFNIDFDRFGRTTNPHQIELTQDLFLKLHSNGYT 145 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----------NPVQWMEEEGYFF- 167 + + + + D V+ +++ N V+ ++ + Sbjct: 146 STDTVDQLHCSKCQRFLADRFVHGECPNCHFDDARGDQCDACSKLINAVELIKPRCHICG 205 Query: 168 ---------RLSAYQDKLLSYYESHPEFILPIERR---NEVI---SFVKSGLKDLSLSRK 212 L + DKL + E H L N + S++K GL+ ++R Sbjct: 206 ETPVVKPSKHLFIHLDKLSAEVEKHMNNQLDSNNHWSANAISIARSWIKGGLEKRCITRD 265 Query: 213 TFDWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---I 263 WG+ +P P++ + YVW DA Y++ T L G W PA++ + + Sbjct: 266 -LKWGVPVPL-PEFQDKVFYVWFDAPVGYMSITKDLV---GDAWTSWWKNPAEVELYNFV 320 Query: 264 GKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGN-VIDPIEVIEEV 320 GKD + FHA+ +PA + A N + + ++ ++ K SKS G V + + Sbjct: 321 GKDNVAFHAVMFPASQIGARDNYTTVNHLCATEYLNYEDTKFSKSRGTGVFGDMARDTGI 380 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D R++L+ +D + D +VN++L + +GN V+R++S + + G+IP Sbjct: 381 EADVWRFYLLYLRPETQDTSFAWDDFALKVNSELLSNLGNFVNRALSFVAASFGGLIPE- 439 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 ++ +L L E + + +++++ + ++Y + +PW L K + Sbjct: 440 MELGNAEIELLEAVRSDLSEYDSLLTAVKLRDGISKILQISRRGNQYMQSMQPWVLIKGD 499 Query: 441 PD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 RA TV+ V + +A+LL ++P+++ +I + + D Sbjct: 500 EQQKKRAGTVIGVAANIAYLIAVLLHPYMPEVSARIREQCGLVD 543 >gi|258568590|ref|XP_002585039.1| methionyl-tRNA synthetase [Uncinocarpus reesii 1704] gi|237906485|gb|EEP80886.1| methionyl-tRNA synthetase [Uncinocarpus reesii 1704] Length = 657 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 125/521 (23%), Positives = 231/521 (44%), Gaps = 53/521 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 K + + I++A+ Y N PH+G+ ++ ADV AR+H+ G L+ GTDE+G Sbjct: 10 QKGQRNILITSALPYVNNVPHLGNIVGSVLSADVFARYHKACGRPTLYVCGTDEYGTATE 69 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A GVT + + ++ +++ + I +D F RT ++H + + ++K++ D G + Sbjct: 70 TKALEEGVTPEQLCAKYNKIHQEVYEWFGIGFDIFGRTPTQKHTEISQRIFKRLYDNGFL 129 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----------------NPVQWMEE 162 + Y + E++ D V +Y+ NP ++ Sbjct: 130 EEKTAEQPYCEKHESFLADRYVEGECPRCHYDDARGDQCDKCGNLLDPFDLINPRCKVDG 189 Query: 163 EGYFFRLSAYQDKLLSYYESH-PEFILP-IER-----RNEVI--SFVKSGLKDLSLSRKT 213 R + + LL + E++ P IE+ + VI S++K GLKD ++R Sbjct: 190 ATPVSRPTKHIHLLLDKLQPQIEEWVRPAIEKGDWPKNSRVITESWLKEGLKDRGITRD- 248 Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW---PADLHV---IG 264 WG+ +P + ++YVW +A Y + T Y D+ + W P D+ + +G Sbjct: 249 LKWGVPVPLEGYENKVLYVWFEACIGYPSITANYTDD-----WELWWRSPEDVQLYQFLG 303 Query: 265 KDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321 KD + FHA+ +P L + + + ++ ++ K SKS G V + Sbjct: 304 KDNVPFHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYESGKFSKSRGIGVFGNNAKDTGIP 363 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPT 379 D RY+L++ D ++ N +L +GNLV+R V +I K Y G++P Sbjct: 364 ADVWRYYLLKNRPETGDTQFEWRSFIDANNGELLAKLGNLVNRVVKLIASPKAYSGVVPD 423 Query: 380 PGAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWEL 436 FT ES +L + +L++ E M+ + LA + + + + K L Sbjct: 424 ---FTVQESFNPVLDDITTILRQYIEEMETVHLRAGLATAMRVAEAGNNLIQSNKLDNSL 480 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P+RA+TV+ + + +I A + ++P + I + L Sbjct: 481 IANEPERAATVVGIVINLIHLCASVFSPYLPATSKSILEQL 521 >gi|189083764|ref|NP_001121131.1| methionyl-tRNA synthetase [Rattus norvegicus] Length = 902 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 122/512 (23%), Positives = 225/512 (43%), Gaps = 55/512 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 268 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 327 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + +++++ +G + + Sbjct: 328 GLTPQEICDKYHAIHVDIYRWFNISFDTFGRTTTPLQTKITQDIFQRLLTRGFVLQDTVE 387 Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156 LR E A + D +G G+ NA + +P Sbjct: 388 ---QLRCEQCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKRPQCKVCRSHP 444 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 V + F L + +L + ++ P R + S+++ GLK ++R Sbjct: 445 VV-KSSKHLFLDLPKLEKRLEDWLGKTMPGSDWTPNARFIIRSWLRDGLKPRCITRD-LK 502 Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDI 267 WG +P + + YVW DA YL+ T Y D + ++W V + KD Sbjct: 503 WGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVDLYQFMAKDN 558 Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324 + FH + +P L A N L K + + ++ ++ K SKS G V + + D Sbjct: 559 VPFHGLVFPCSALGAEDNYTLVKNLIATEYLNYEDGKFSKSRGIGVFGDMAQDTGIPADI 618 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 R++L+ G+D + L + N++L N +GN ++R+ + K + G +P T Sbjct: 619 WRFYLLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCVPE-MVLT 677 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--- 441 D +++ S LQ + ++ I AL ++++ ++Y +PW+ K + Sbjct: 678 HDDRRLVAHVSWELQRYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGDEMDR 737 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 RA TV + V + L+++LQ ++P +++ I Sbjct: 738 QRAGTVTGMAVNIAALLSVMLQPYMPTVSSTI 769 >gi|197104673|ref|YP_002130050.1| methionyl-tRNA synthetase [Phenylobacterium zucineum HLK1] gi|196478093|gb|ACG77621.1| methionyl-tRNA synthetase [Phenylobacterium zucineum HLK1] Length = 606 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 127/548 (23%), Positives = 219/548 (39%), Gaps = 85/548 (15%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++A+ Y N H+G A M+ ADV ARF R G + L+ TDEHG AA Sbjct: 3 RILITSALPYINGIKHLGTLAGSMLPADVYARFQRARGRETLYICATDEHGTPTELAAAE 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG+ F Q + +S+D F R++ ++H + + + + G I + Sbjct: 63 AGLDPATFCAQQHEVQHRLGRAFGLSWDHFGRSSSPQNHRLTQRFAQTLWEAGFIEERVT 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWMEEEG--------- 164 YS D + D V Y+ A G Q N +P + Sbjct: 123 QQVYSNADRRFLPDRYVIGTCPHCGYEAARGDQCENCTRVLDPADLLHPRSAVSGSTDIE 182 Query: 165 ------YFFRLSAYQDKLLSYYESH----PEFILPIERRNEVISFVKSGLKDLSLSR--- 211 F R S + KL + E+ P + I + ++ GL+D ++R Sbjct: 183 IRGSKHLFLRQSLFAGKLRDWIEAKRGRWPHLVTSI-----ALKWLDEGLQDRGITRDLE 237 Query: 212 -----KTFDWGI----KIPDDPQY---IMYVWIDALTNYLTTT-----------GYLDNP 248 F+WG K+PD + YVW DA Y+ T G Sbjct: 238 WGVPVNAFEWGPNPDGKLPDVEGLAGKVFYVWFDAPIEYIGATWEWAESRAVEAGRPGAD 297 Query: 249 DGSKAKFWPAD-------LHVIGKDILRFHAIYWPAFLLSANLPL------------PKK 289 D ++W + +GKD + FH + +P L+ N L P K Sbjct: 298 DIEWERWWRGPEASDVTYVEFMGKDNVPFHTVGFPCTLIGVNERLGAGGAWRVAEARPWK 357 Query: 290 VFS--HGF--ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345 + GF + + G K S S G + +E + D R++++ D + + Sbjct: 358 LVDDLKGFNWLDYYGGKFSTSQGRGVFMDHALELLPADYWRWWIMANAPETSDATFAWEQ 417 Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405 + +VNADLA+ +GN V+R ++G +P G E + ++ + L+E+ ++ Sbjct: 418 FRDQVNADLADVLGNFVNRICKFAESRFEGQVPEGGEPGELETALEADVLMKLRELTGHL 477 Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465 +++ +A + L ++Y PW KT+ DRA+ + + + A + + F Sbjct: 478 EDREFRKATTALRQLWVLGNQYLTEAAPWTAIKTDRDRAAVAVRYGLNLAALFAKVSEPF 537 Query: 466 VPKLANKI 473 +P A K+ Sbjct: 538 IPFAAEKV 545 >gi|329889121|ref|ZP_08267464.1| methionyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568] gi|328844422|gb|EGF93986.1| methionyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568] Length = 569 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 120/522 (22%), Positives = 216/522 (41%), Gaps = 48/522 (9%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++A+ Y N H+G+ A M+ ADV ARF R G DVL+ TDEHG AA Sbjct: 3 RILITSALPYINGIKHLGNLAGSMLPADVWARFMRARGHDVLYVCATDEHGTPAELAAAA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + + D+ + + AD +S+D F R++ + + K + ++G I + Sbjct: 63 AGQDVRTYCDEQHQVQKKAADAFSLSFDIFGRSSNAPNTRLTQHFAKVLEERGLIEERVD 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP---------VQ 158 YS+ D + D V Y+ A G Q N NP ++ Sbjct: 123 RMIYSIDDARFLPDRYVEGTCPHCAYEKARGDQCDNCGRLLDPTDLINPYSAVSGSRNLE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + + + D + ++ ++ P+ R + + GL D ++R WG+ Sbjct: 183 VRDTRHLYLLQTKIADDVRAWVDARSPQWQPLAR-SIAYKHLDEGLIDRGITRD-LKWGV 240 Query: 219 KI--------PDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD--------LH 261 + P + YVW DA Y+ T + + G+ +W D + Sbjct: 241 PVVGPDGGPRPGMEGKVFYVWFDAPIEYIGATEEWAEQTGGNWRSWWRLDEGAEDVRYVQ 300 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 +GKD + FH + +PA +L + P ++ + ++ G K S S+G + + +E Sbjct: 301 FMGKDNVAFHTVSFPATILGSGEPWKTVDQLKAFNWLNWYGGKFSTSMGRGVFMDQALEL 360 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 + D R+ L D + + + N DLA+ +GN V+R V +DG+ P Sbjct: 361 LPADYWRWHLTAYGPEHSDAAFTWEQFQSTTNKDLADVLGNFVNRIVKFTESKFDGVAPE 420 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 G +E + + L + + +A +L + Y PW KT Sbjct: 421 GGEPGALEEKLAADVKAALASLTYEFEAMEFRKAAQAARALWVLGNEYLQEAAPWTALKT 480 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 + +RA+ V+ + ++ A + F+P+ A +I + D Sbjct: 481 DRERAAVVVRTGLSLVALFARVTAPFMPEAAARIAATVGATD 522 >gi|149066599|gb|EDM16472.1| rCG59785, isoform CRA_a [Rattus norvegicus] Length = 910 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 122/512 (23%), Positives = 225/512 (43%), Gaps = 55/512 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 268 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 327 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + +++++ +G + + Sbjct: 328 GLTPQEICDKYHAIHVDIYRWFNISFDTFGRTTTPLQTKITQDIFQRLLTRGFVLQDTVE 387 Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156 LR E A + D +G G+ NA + +P Sbjct: 388 ---QLRCEQCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKRPQCKVCRSHP 444 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 V + F L + +L + ++ P R + S+++ GLK ++R Sbjct: 445 VV-KSSKHLFLDLPKLEKRLEDWLGKTMPGSDWTPNARFIIRSWLRDGLKPRCITRD-LK 502 Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDI 267 WG +P + + YVW DA YL+ T Y D + ++W V + KD Sbjct: 503 WGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVDLYQFMAKDN 558 Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324 + FH + +P L A N L K + + ++ ++ K SKS G V + + D Sbjct: 559 VPFHGLVFPCSALGAEDNYTLVKNLIATEYLNYEDGKFSKSRGIGVFGDMAQDTGIPADI 618 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 R++L+ G+D + L + N++L N +GN ++R+ + K + G +P T Sbjct: 619 WRFYLLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCVPE-MVLT 677 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--- 441 D +++ S LQ + ++ I AL ++++ ++Y +PW+ K + Sbjct: 678 HDDRRLVAHVSWELQRYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGDEMDR 737 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 RA TV + V + L+++LQ ++P +++ I Sbjct: 738 QRAGTVTGMAVNIAALLSVMLQPYMPTVSSTI 769 >gi|149715335|ref|XP_001488941.1| PREDICTED: methionyl-tRNA synthetase [Equus caballus] Length = 900 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 122/512 (23%), Positives = 226/512 (44%), Gaps = 55/512 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 325 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 326 GLTPQEICDKYHAIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLFSRGFVLQDTVE 385 Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156 LR E A + D +G G+ NA + P Sbjct: 386 ---QLRCEQCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINATELKKPQCKVCRSCP 442 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESH-PEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 V + F L + +L + E+ P R + S+++ GLK ++R Sbjct: 443 VV-KSSQHLFLDLPKLEKRLEEWLENTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LK 500 Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDI 267 WG +P + + YVW DA YL+ T Y D + ++W V + KD Sbjct: 501 WGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVSLYQFMAKDN 556 Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324 + FH + +P L A N L + + ++ ++ K SKS G V + + D Sbjct: 557 VPFHGLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADI 616 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 R++L+ G+D + + + N++L N +GN ++R+ + K + G +P T Sbjct: 617 WRFYLLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPE-MVLT 675 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPD- 442 D+ +L+ + LQ + ++ I AL ++++ ++Y +PW+ +K + D Sbjct: 676 SDDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGSEADR 735 Query: 443 -RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 RA TV + V + L+++LQ ++P ++ I Sbjct: 736 QRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767 >gi|118386032|ref|XP_001026138.1| methionyl-tRNA synthetase [Tetrahymena thermophila] gi|89307905|gb|EAS05893.1| methionyl-tRNA synthetase [Tetrahymena thermophila SB210] Length = 837 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 123/517 (23%), Positives = 212/517 (41%), Gaps = 59/517 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G +++ DV AR+ R G + ++ GTDE+G A Sbjct: 265 QRNILITSALPYVNNAPHLGTLIGCVLSGDVFARYCRSRGYNTIYICGTDEYGTATEMKA 324 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T + + +D+ D DI +D F RTT ++H + ++ + G I + Sbjct: 325 LQEKTTPAEICTKYYKIQKDVYDWFDIDFDIFGRTTTEKHTKISQDIFLTLHKNGYIKED 384 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH---------------NPVQWMEEEGYFF 167 + + + D V +G QH NP + + + Sbjct: 385 IMHQSFCAACDKFLADRYV----NGTCPFCQHDDCHGDQCDKCGKLVNPAELINPKCTIC 440 Query: 168 R----LSAYQDKLLSYYESHPEFILPIERRNE-----------VISFVKSGLKDLSLSRK 212 + + + L + E IE+R++ +++K+GLK ++R Sbjct: 441 KNPSVIKETKHCFLDLPQLEKEIDEFIEKRSKEGDWSDNAYKTSKAWIKNGLKYRCITRD 500 Query: 213 TFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYL--------DNPDGSKAKFWPADLHV 262 WG IP +MYVW DA Y + T L NP+ K Sbjct: 501 -LKWGTPIPLAGWENKVMYVWFDAPIGYPSITANLVEDWEKWWKNPENVKL------YQF 553 Query: 263 IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIE 318 IGKD + FH + +P LL N L + S ++ ++ K SKS +G D + Sbjct: 554 IGKDNIPFHCVIFPGTLLGTRENWTLLNSMSSCEYLQYESGKFSKSKCVGVFGDDAQKTG 613 Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 + V+ RY+L+ D + + N +L +GNLV R + + + +P Sbjct: 614 -IPVEVWRYYLLINRPEQNDTNFQWSDFAAKNNNELLPNVGNLVQRILKFLYSKLEKKVP 672 Query: 379 TP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 T E D++ L+ + Q+ +M+ + AL V+ + SE + Y +PW Sbjct: 673 TLDFSLLNEEDKNWLASIWNLFQQYLSHMEKVELKSALKVVMQISSEGNNYMQKNEPWNK 732 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 R L+V V +IR L+ L + F+P L+ KI Sbjct: 733 ANQETGRHIVSLFVLVNIIRFLSALFEPFMPTLSAKI 769 >gi|41056059|ref|NP_956370.1| methionyl-tRNA synthetase, cytoplasmic [Danio rerio] gi|37682147|gb|AAQ98000.1| methionine-tRNA synthetase [Danio rerio] Length = 922 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 127/514 (24%), Positives = 225/514 (43%), Gaps = 53/514 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV AR+ RL G ++L+ GTDE+G A Sbjct: 261 KRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYGRLRGWNLLYICGTDEYGTATENKA 320 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + G+T + D+ + I +D F RTT + + + ++ ++ ++G + + Sbjct: 321 REEGLTPQQICDKYHCIHASIYQWFQIDFDFFGRTTTQHQTEIAQDIFWRLHERGFLLED 380 Query: 123 CYSGWYSLRDEAY--YNDDEVYKG----------------ADGQYYNAQH--NPVQWMEE 162 LR E + D +G G+ NA NP + + Sbjct: 381 TVE---QLRCEGCQRFLADRFVEGECPHCRFPEARGDQCDKCGRLINAVELKNPQCKVCK 437 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIER---------RNEVISFVKSGLKDLSLSRKT 213 E R S + L E E L R+ S+++ GLK ++R Sbjct: 438 ETPVIRSSKHLFLNLPKLEQDLEQWLQTSTAAGDWTTNARHITRSWLRDGLKPRCITRD- 496 Query: 214 FDWGIKIP--DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGK 265 WG +P D + + YVW DA YL+ T Y D + ++W V + K Sbjct: 497 LKWGTPVPHPDYKEKVFYVWFDAPIGYLSITANYTDQWE----RWWKNPQQVELYNFMAK 552 Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322 D + FH++ +P LL A N L + + ++ ++ K SKS G V + + Sbjct: 553 DNVPFHSVVFPCSLLGAQDNYTLVNNLIATEYLNYEDTKFSKSRGVGVFGDMAKDTGIPS 612 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R++L+ G+D + + + N++L N +GN ++R+ + K +DG +P Sbjct: 613 DVWRFYLLYLRPEGQDSAFSWTDMALKNNSELLNNLGNFINRAGMFVSKFFDGCVPEMLL 672 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 + I VC + Q I + + I AL ++++ ++Y +PW+ K + Sbjct: 673 NDDDKRLIAQVCWELKQYI-QLLDKVRIRDALKCILNMSRHGNQYIQLNEPWKKIKGGAE 731 Query: 443 ---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 RA TV V+V V LA +L+ F+P ++ I Sbjct: 732 DRCRAGTVTGVSVNVACLLAAVLEPFMPTVSLSI 765 >gi|195149636|ref|XP_002015762.1| GL10845 [Drosophila persimilis] gi|194109609|gb|EDW31652.1| GL10845 [Drosophila persimilis] Length = 1021 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 119/518 (22%), Positives = 218/518 (42%), Gaps = 63/518 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD+ AR+ R G + L GTDE+G A Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIFARYSRCAGYNTLLICGTDEYGTATENKALAE 315 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 +T + D+ + I +D F RTT + D + +K + G I Sbjct: 316 NMTPREICDKYFELHNSIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVHSAGYIITESVE 375 Query: 126 GWYSLRDEAYYNDDEV-----YKGAD------------GQYYNAQH---------NPVQW 159 + + + D V + G G+ NA N Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGCGYADARGDQCDKCGKLVNATELIRPRCKVCNTAPI 435 Query: 160 MEEEGYFF--------RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211 + F RL + DK + + + + I ++++ GLK ++R Sbjct: 436 LRSSDQLFIDLPKAEPRLREWVDKAENGWTHNAKVI--------TRAWLREGLKPRCITR 487 Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD------LHV 262 WGI +P + + YVW DA Y++ T K+W PA Sbjct: 488 D-LKWGIPVPHSGFEKKVFYVWFDAPFGYVSMTKRYTK---EYQKWWQPAKGTDVELFQF 543 Query: 263 IGKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEE 319 + KD + FH++ WP+ LL+ N L + + ++ ++ K SKS G V Sbjct: 544 MAKDNVPFHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQATG 603 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 + D R++L G+D + + L R N++L N +GN V+R++ K+++ ++P Sbjct: 604 IPADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFNSIVPE 663 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 A TE + +L++ +R L+ +++ + + ++++ + Y Q+PW L K Sbjct: 664 VVA-TEEELILLALVNRELRGYINSLEKAKLRDGIRHLLAISRHGNGYMQTQQPWVLLKG 722 Query: 440 NPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 N + RA+T++ + + LA LL ++P A +F Sbjct: 723 NDEQKKRAATIIGLCANIACLLANLLFPYMPSTARTLF 760 >gi|328948204|ref|YP_004365541.1| methionyl-tRNA synthetase [Treponema succinifaciens DSM 2489] gi|328448528|gb|AEB14244.1| Methionyl-tRNA synthetase [Treponema succinifaciens DSM 2489] Length = 775 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 114/525 (21%), Positives = 221/525 (42%), Gaps = 56/525 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +K + +++A+ Y N PH+G+ +M+ ADV ARF R G + L+ GTDE+G Sbjct: 4 IKNLNRRLVTSALPYVNNIPHLGNLIQMLSADVFARFCRSRGYETLYVCGTDEYGTATET 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A T + D + ++ DI++D F RT+ + + + ++K + G I Sbjct: 64 RAVEEKKTPRELCDYYYKQHDEIYKWFDIAFDKFGRTSNEECTEITQAMFKDLDKNGFIK 123 Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM--------- 160 + + + + D V+ +G + +PV+ Sbjct: 124 EHTNKQLFCPSCQMFLADRYVHGVCPKCGFEDARGDQCDKCGSLLDPVELKSPRCATCGS 183 Query: 161 -----EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + L + L S+ ++ E N ++++ GL + +++R Sbjct: 184 TPEIRETRHLYIDLPSISKNLDSWMNKTSKEGRWSDNAINITKAWIRDGLNERAITR-DL 242 Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYL-------DNPDGSKAKFW--------- 256 WGI +P + YVW +A Y++ T L P +W Sbjct: 243 KWGIPVPKAGYENKVFYVWFNAPIGYISITKQLADELIAASKPSFDWKSWWLPEESEEAK 302 Query: 257 ---PADL-HVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNV 310 P DL IGKD + FH + +P + + K + S ++ ++ K SKS G Sbjct: 303 NKPPVDLFQFIGKDNIPFHTVIFPCSQIGSGHNFTKLFHMSSTEYLNYEDGKFSKSRGVG 362 Query: 311 IDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 + + E + DA R+++ +D + ++R N +L +GNLV+R++ + Sbjct: 363 VFGTDAKESGIKADAWRFYIFYNRPEKQDYQFTWKEFRERYNGELIGNLGNLVNRTLLFV 422 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 K YD IP DE + + + + ++ + A +V + ++ F Sbjct: 423 QKYYDSKIPDAPV----DEKLWAQVKEHEAKATDYLEWANLKDAFHEVFVISDIGNKAFQ 478 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +PW+ ++T+P+RA+ +++ +I+ L I+ ++P+ A KI Sbjct: 479 DTEPWKTRETHPERAAKLIHNLCYMIKDLMIMAHPYMPQFAEKIM 523 >gi|328776868|ref|XP_003249232.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like isoform 1 [Apis mellifera] Length = 919 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 124/522 (23%), Positives = 230/522 (44%), Gaps = 52/522 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ + + I++A+ Y N PH+G+ ++ AD+ AR+ R + LF +GTDE+G Sbjct: 217 KDEKNVLITSALPYVNNVPHLGNIIGCVLSADIFARYCRQRNYNTLFISGTDEYGTATEA 276 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A T + D+ D+ +I +D F RTT + + + +I +G I Sbjct: 277 KALEEKTTPQSICDKFFDIHNDIYRWFNIGFDYFGRTTTPEQTEIVQKFFLRIKSQGYIL 336 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME----------- 161 + + D V Y+ A G + + + + Sbjct: 337 SETVDQLLCESCDRFLADRFVEGTCPRCKYEDARGDQCDGCSHLINATDLISPRCKVCSN 396 Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS--FVKSGLKDLSLSRKT 213 E +F L ++KL + + + R V++ +++ GLK ++R Sbjct: 397 RPIIKKSEQFFLDLPKLENKLKEWLSTVENGWSGVAR---VVAKPWLRDGLKPRCITRD- 452 Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHV-----IGK 265 WGI +P + YVW DA Y++ T ++W P D+ V + K Sbjct: 453 LKWGIPVPIKGFENKVFYVWFDAPFGYMSITKRYTK---EYEQWWKPKDIKVDLYQFMAK 509 Query: 266 DILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV- 322 D + FHAI +PA LL+AN L K + + ++ ++ K SKS G + + + G+ Sbjct: 510 DNVPFHAIMFPASLLAANEDYILLKHLMATEYLNYEDTKFSKSRGIGVFGTDA-RDTGIP 568 Query: 323 -DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D R++L +D ++ L + N++L N GN V+R++ + + ++ IP P Sbjct: 569 SDVWRFYLAYVRPETQDSNFNWVDLATKNNSELLNNFGNFVNRALVFVERYFESKIP-PI 627 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKTN 440 E D +L++ R L M+ + L ++++ ++Y Q+PW ++K T+ Sbjct: 628 ELQEDDLIVLALAQRELSSYICAMEQAKLRDGLKHILAISKHGNQYMQFQEPWVKIKGTD 687 Query: 441 PD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 D RA T++ ++ + L+ LL F+P A ++ L +A Sbjct: 688 NDKKRAGTIIGISCNMACLLSALLAPFMPSTARELRSQLGLA 729 >gi|224532120|ref|ZP_03672752.1| methionyl-tRNA synthetase [Borrelia valaisiana VS116] gi|224511585|gb|EEF81991.1| methionyl-tRNA synthetase [Borrelia valaisiana VS116] Length = 724 Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 109/500 (21%), Positives = 213/500 (42%), Gaps = 43/500 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 ++ A+ Y N PH+G+ +++ AD AR+ ++ G++ L+ GTDE+G A T Sbjct: 7 VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYICGTDEYGTATETKALIEKTT 66 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 ++ + + +I +D F RTT K H + + + K+ G I + ++ Sbjct: 67 PLELCNKYYEIHKSIYKWFNIDFDIFGRTTNKHHQEIVQNFFLKLEKNGYIKERETEQFF 126 Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 +D + D + KG + NP+ + + + K Sbjct: 127 CNKDSIFLADRYVIGECPECQSIAKGDQCDNCSKLLNPIDLINPKCIICKNKPILKKTNH 186 Query: 179 YYESHPEFILPIER---------------RNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223 Y P+ +E+ N SF++ GLK+ +++R WGI +P Sbjct: 187 LYIDLPKIKTKLEKWIKNPNTSKNWNTNALNMTNSFLRDGLKERAITR-DLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276 + YVW DA Y++ T N + +W + V IGKD + FH I +P Sbjct: 246 GYENKVFYVWFDAPIGYISIT---KNIVKNWKSWWKNNEQVNLVQFIGKDNILFHTIIFP 302 Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333 + + N + ++ S ++ ++ K SKS G I + I + D R+++ Sbjct: 303 CIEIGSKENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDVWRFYIYYNR 362 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 D + +RVN +L + NLV+R ++ K + ++ + + I Sbjct: 363 PEKSDFQFMWQDFMERVNTELIDNFSNLVNRVLTFQKKFFGDVVEPIEIQNKFWKQITPK 422 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++L ++ + AL +++ + S ++ F +PW+ K + P ++ + Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKDSFPQETKELILNLIY 478 Query: 454 VIRQLAILLQAFVPKLANKI 473 +IR L+IL+ F+P+ + KI Sbjct: 479 LIRDLSILMMPFIPETSKKI 498 >gi|73968525|ref|XP_859038.1| PREDICTED: similar to methionine-tRNA synthetase isoform 5 [Canis familiaris] Length = 907 Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 116/508 (22%), Positives = 224/508 (44%), Gaps = 47/508 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + + GTDE+G A Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTFYLCGTDEYGTATETKAMEE 325 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 326 GLTPQEICDKYHAIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLTRGFVLQDTVE 385 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161 R + D V Y+ A G + + +E Sbjct: 386 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCRSCPVVK 445 Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + F L + +L + ++ P R + S+++ GLK ++R WG Sbjct: 446 SSQHLFLDLPKLEKRLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGTP 504 Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKDILRFH 271 +P + + YVW DA YL+ T Y D + ++W P +++ + KD + FH Sbjct: 505 VPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVNLYQFMAKDNVPFH 560 Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328 + +P L A N L + + ++ ++ K SKS G V + + D R++ Sbjct: 561 GLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRFY 620 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L+ G+D + + + N++L N +GN ++R+ + K + G +P T D Sbjct: 621 LLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPE-MVLTSDDR 679 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPD--RAS 445 +L+ + LQ + ++ I AL ++++ ++Y +PW+ +K + D RA Sbjct: 680 RLLAHVTLELQHYHQLLEKVRIREALRSILTISRHGNQYIQVNEPWKRIKGSEADRQRAG 739 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473 TV + V + L+++LQ ++P ++ I Sbjct: 740 TVTGLAVNIAALLSVMLQPYMPTVSATI 767 >gi|328776866|ref|XP_397235.3| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like isoform 2 [Apis mellifera] Length = 960 Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 124/522 (23%), Positives = 230/522 (44%), Gaps = 52/522 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+ + + I++A+ Y N PH+G+ ++ AD+ AR+ R + LF +GTDE+G Sbjct: 258 KDEKNVLITSALPYVNNVPHLGNIIGCVLSADIFARYCRQRNYNTLFISGTDEYGTATEA 317 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A T + D+ D+ +I +D F RTT + + + +I +G I Sbjct: 318 KALEEKTTPQSICDKFFDIHNDIYRWFNIGFDYFGRTTTPEQTEIVQKFFLRIKSQGYIL 377 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME----------- 161 + + D V Y+ A G + + + + Sbjct: 378 SETVDQLLCESCDRFLADRFVEGTCPRCKYEDARGDQCDGCSHLINATDLISPRCKVCSN 437 Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS--FVKSGLKDLSLSRKT 213 E +F L ++KL + + + R V++ +++ GLK ++R Sbjct: 438 RPIIKKSEQFFLDLPKLENKLKEWLSTVENGWSGVAR---VVAKPWLRDGLKPRCITRD- 493 Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHV-----IGK 265 WGI +P + YVW DA Y++ T ++W P D+ V + K Sbjct: 494 LKWGIPVPIKGFENKVFYVWFDAPFGYMSITKRYTK---EYEQWWKPKDIKVDLYQFMAK 550 Query: 266 DILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV- 322 D + FHAI +PA LL+AN L K + + ++ ++ K SKS G + + + G+ Sbjct: 551 DNVPFHAIMFPASLLAANEDYILLKHLMATEYLNYEDTKFSKSRGIGVFGTDA-RDTGIP 609 Query: 323 -DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D R++L +D ++ L + N++L N GN V+R++ + + ++ IP P Sbjct: 610 SDVWRFYLAYVRPETQDSNFNWVDLATKNNSELLNNFGNFVNRALVFVERYFESKIP-PI 668 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKTN 440 E D +L++ R L M+ + L ++++ ++Y Q+PW ++K T+ Sbjct: 669 ELQEDDLIVLALAQRELSSYICAMEQAKLRDGLKHILAISKHGNQYMQFQEPWVKIKGTD 728 Query: 441 PD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 D RA T++ ++ + L+ LL F+P A ++ L +A Sbjct: 729 NDKKRAGTIIGISCNMACLLSALLAPFMPSTARELRSQLGLA 770 >gi|73968519|ref|XP_531646.2| PREDICTED: similar to methionine-tRNA synthetase isoform 1 [Canis familiaris] Length = 898 Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 116/508 (22%), Positives = 224/508 (44%), Gaps = 47/508 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + + GTDE+G A Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTFYLCGTDEYGTATETKAMEE 325 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 326 GLTPQEICDKYHAIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLTRGFVLQDTVE 385 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161 R + D V Y+ A G + + +E Sbjct: 386 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCRSCPVVK 445 Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + F L + +L + ++ P R + S+++ GLK ++R WG Sbjct: 446 SSQHLFLDLPKLEKRLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGTP 504 Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKDILRFH 271 +P + + YVW DA YL+ T Y D + ++W P +++ + KD + FH Sbjct: 505 VPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVNLYQFMAKDNVPFH 560 Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328 + +P L A N L + + ++ ++ K SKS G V + + D R++ Sbjct: 561 GLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRFY 620 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L+ G+D + + + N++L N +GN ++R+ + K + G +P T D Sbjct: 621 LLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPE-MVLTSDDR 679 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPD--RAS 445 +L+ + LQ + ++ I AL ++++ ++Y +PW+ +K + D RA Sbjct: 680 RLLAHVTLELQHYHQLLEKVRIREALRSILTISRHGNQYIQVNEPWKRIKGSEADRQRAG 739 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473 TV + V + L+++LQ ++P ++ I Sbjct: 740 TVTGLAVNIAALLSVMLQPYMPTVSATI 767 >gi|331243750|ref|XP_003334517.1| methionyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309313507|gb|EFP90098.1| methionyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 711 Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 128/573 (22%), Positives = 238/573 (41%), Gaps = 79/573 (13%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGL--DVLFTTGTDEHGQK 57 + +R + I++A+ Y N PH+G+ + ADV AR+ R + VL+ GTDE+G Sbjct: 31 LSDRPNILITSALPYVNNAPHLGNIIGSTLSADVFARYSRTGPVVAQVLYICGTDEYGTT 90 Query: 58 IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117 A G+T D+ + +D DI +D F RTT + + C+ ++ + D G Sbjct: 91 TETKALEEGMTPSDLCDKYHQIHKDSYQWFDIGFDHFGRTTTPKQTEICQEIFTALYDNG 150 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG---------------ADGQYYNAQHNPVQWMEE 162 + + Y +D +G D + P+ + Sbjct: 151 HLTEHEIEQVYCEKDARQVLSGSGARGDQCDTCCQTLDAIELIDKKCKICSSTPIS-KKS 209 Query: 163 EGYFFRLSAYQDKLLSYYESHPE-FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 + F L Q ++ S+Y S E + ++++ GL++ L+R WG+ +P Sbjct: 210 KHLFIDLPKLQKQIESWYNSAKEGHHWSSNGKAFTEAWLRDGLRERCLTRD-LKWGVPVP 268 Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDILRFHAIY 274 +MYVW DA Y + T N K+W P ++ + +GKD + FH I Sbjct: 269 IKGWEDKVMYVWFDAPIGYPSITANYSN---DWEKWWKNPKEVTLYQFMGKDNVPFHTIL 325 Query: 275 WPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEEVGVDALRY 327 +PA+L+ + + + ++ ++ K SKS G +V EV RY Sbjct: 326 FPAYLMGTGQEWTMLNHISTTEYLQYENVKFSKSNNVGVFGQNARETQVPSEV----WRY 381 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP------- 380 FL+ D + + N++L N +GN V+R V Y ++P P Sbjct: 382 FLISTRPETNDSQFTWTDFISKANSELLNNLGNFVNRIVKFCNARYHSIVPDPLSWPVVG 441 Query: 381 -------------------------GAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 +F E D++ + + +L + E+M++ + +AL+ Sbjct: 442 PPTQSESASKEDESSSTTSTQITSRESFDEEDQAFVGDINGLLTQYIESMESLKLRQALS 501 Query: 416 QVISLVSEVDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 V+++ + ++Y K + L +P R + ++ V++ ++ L++L+ +P + I Sbjct: 502 IVMAISARGNQYLQENKIDYSLLLASPRRCAQIVLVSLNLVYLLSVLVYPSMPSTSELIL 561 Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507 L A + R ++ L PG H D I+ Sbjct: 562 KQLN-APKRRLSRTFGIDLLPG---HTIGDAIY 590 >gi|73968523|ref|XP_849532.1| PREDICTED: similar to methionine-tRNA synthetase isoform 3 [Canis familiaris] Length = 905 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 116/508 (22%), Positives = 224/508 (44%), Gaps = 47/508 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + + GTDE+G A Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTFYLCGTDEYGTATETKAMEE 325 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 326 GLTPQEICDKYHAIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLTRGFVLQDTVE 385 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161 R + D V Y+ A G + + +E Sbjct: 386 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCRSCPVVK 445 Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + F L + +L + ++ P R + S+++ GLK ++R WG Sbjct: 446 SSQHLFLDLPKLEKRLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGTP 504 Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKDILRFH 271 +P + + YVW DA YL+ T Y D + ++W P +++ + KD + FH Sbjct: 505 VPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVNLYQFMAKDNVPFH 560 Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328 + +P L A N L + + ++ ++ K SKS G V + + D R++ Sbjct: 561 GLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRFY 620 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L+ G+D + + + N++L N +GN ++R+ + K + G +P T D Sbjct: 621 LLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPE-MVLTSDDR 679 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPD--RAS 445 +L+ + LQ + ++ I AL ++++ ++Y +PW+ +K + D RA Sbjct: 680 RLLAHVTLELQHYHQLLEKVRIREALRSILTISRHGNQYIQVNEPWKRIKGSEADRQRAG 739 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473 TV + V + L+++LQ ++P ++ I Sbjct: 740 TVTGLAVNIAALLSVMLQPYMPTVSATI 767 >gi|296487656|gb|DAA29769.1| methionyl-tRNA synthetase, cytoplasmic [Bos taurus] Length = 898 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 126/516 (24%), Positives = 228/516 (44%), Gaps = 63/516 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 325 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 326 GLTPQEICDKYHVIHADIYRWFNISFDFFGRTTTPQQTKITQDIFQRLLARGFVLQDTVE 385 Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156 LR E A + D +G G+ NA + P Sbjct: 386 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCRSCP 442 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP-----IERRNEVISFVKSGLKDLSLSR 211 V + F L KL + E E LP R + S+++ GLK ++R Sbjct: 443 VV-KSSQHLFLDLP----KLAARVEEWLEKTLPGSDWTANARFIIRSWLRDGLKPRCITR 497 Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---I 263 WG +P + + YVW DA YL+ T Y D + K+W P +++ + Sbjct: 498 D-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----KWWKNPEQVNLYQFM 552 Query: 264 GKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEV 320 KD + FH I +P+ L A N L + + ++ ++ K SKS G V + + Sbjct: 553 AKDNVPFHGIVFPSSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGI 612 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D R++L+ G+D + + + N++L N +GN ++R+ + K + G +P Sbjct: 613 PADIWRFYLLYIRPEGQDSAFSWTDMLFKNNSELLNNLGNFINRAGMFVSKFFGGFVPE- 671 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK-- 438 T D+ +L+ + LQ + ++ I AL ++++ ++Y +PW+ K Sbjct: 672 MVLTSDDQRLLTHITLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGG 731 Query: 439 -TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + RA TV + V + L+++LQ ++P ++ I Sbjct: 732 EADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767 >gi|297250681|ref|ZP_06934199.1| methionine--tRNA ligase [Neisseria polysaccharea ATCC 43768] gi|296838302|gb|EFH22240.1| methionine--tRNA ligase [Neisseria polysaccharea ATCC 43768] Length = 462 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 14/277 (5%) Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL------DNPDGSKAK 254 ++ L D +SR +G +IPD P YVW+DA Y+ + L D + KA Sbjct: 10 ETTLSDWDISRDAPYFGFEIPDSPGKYFYVWLDAPVGYMASFKNLCGRIGIDFDEYFKAG 69 Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 H IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I Sbjct: 70 SQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAK 129 Query: 315 EVIEE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 +E+ + + +RY++ ++ +D + RVN+DL N+ +R+ I K Sbjct: 130 SYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKR 189 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 ++G + SD ++L+ + + I E +N+ +AL +++L V+ Y DA K Sbjct: 190 FEGKLKDV-----SDSALLAKLTAQSEAIAECYENREYAKALRDIMALADAVNEYVDANK 244 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 PWEL K + + V E+I IL P L Sbjct: 245 PWELAKQE-GQDERLHEVCSELINAFTILTAYLAPVL 280 >gi|34785759|gb|AAH57463.1| Mars protein [Danio rerio] Length = 913 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 126/514 (24%), Positives = 225/514 (43%), Gaps = 53/514 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV AR+ RL G ++L+ GTDE+G A Sbjct: 261 KRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYGRLRGWNLLYICGTDEYGTATENKA 320 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + G+T + D+ + I +D F RTT + + + ++ ++ ++G + + Sbjct: 321 REEGLTPQQICDKYHCIHASIYQWFQIDFDFFGRTTTQHQTEIAQDIFWRLHERGFLLED 380 Query: 123 CYSGWYSLRDEAY--YNDDEVYKG----------------ADGQYYNAQH--NPVQWMEE 162 LR E + D +G G+ NA NP + + Sbjct: 381 TVE---QLRCEGCQRFLADRFVEGECPHCRYPEARGDQCDKCGRLINAVELKNPQCKVCK 437 Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIER---------RNEVISFVKSGLKDLSLSRKT 213 E R S + L E E L R+ S+++ GLK ++R Sbjct: 438 ETPVIRSSKHLFLNLPKLEQDLEQWLQTSTAAGDWTTNARHITRSWLRDGLKPRCITRD- 496 Query: 214 FDWGIKIP--DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGK 265 WG +P D + + YVW DA YL+ T Y D + ++W V + K Sbjct: 497 LKWGTPVPHPDYKEKVFYVWFDAPIGYLSITANYTDQWE----RWWKNPQQVELYNFMAK 552 Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322 D + FH++ +P LL A N L + + ++ ++ K SKS G V + + Sbjct: 553 DNVPFHSVVFPCSLLGAQDNYTLVNNLIATEYLNYEDTKFSKSRGVGVFGDMAKDTGIPS 612 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R++L+ G+D + + + N++L N +GN ++R+ + K ++G +P Sbjct: 613 DVWRFYLLYLRPEGQDSAFSWTDMALKNNSELLNNLGNFINRAGMFVSKFFEGCVPEMLL 672 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 + I VC + Q I + + I AL ++++ ++Y +PW+ K + Sbjct: 673 NDDDKRLIAQVCWELKQYI-QLLDKVRIRDALKCILNMSRHGNQYIQLNEPWKKIKGGAE 731 Query: 443 ---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 RA TV V+V V LA +L+ F+P ++ I Sbjct: 732 DRCRAGTVTGVSVNVACLLAAVLEPFMPTVSLSI 765 >gi|225076782|ref|ZP_03719981.1| hypothetical protein NEIFLAOT_01833 [Neisseria flavescens NRL30031/H210] gi|224951880|gb|EEG33089.1| hypothetical protein NEIFLAOT_01833 [Neisseria flavescens NRL30031/H210] Length = 463 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 84/280 (30%), Positives = 134/280 (47%), Gaps = 15/280 (5%) Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAK 254 ++ L D +SR +G +IPD P YVW+DA Y+ + L + G KA Sbjct: 10 ETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAG 69 Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 H IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I Sbjct: 70 SQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAK 129 Query: 315 EVIEE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 +E+ + + +RY++ ++ +D + RVN+DL N+ +R+ I K Sbjct: 130 SYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKR 189 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 ++G + +D +L+ + + I E +N+ RAL +++L V+ Y DA K Sbjct: 190 FEGRLKDV-----TDSELLAKLAAESETIAEQYENREYARALRDIMALADAVNEYVDANK 244 Query: 433 PWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 PWEL K +R V + L L +P+ A Sbjct: 245 PWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTA 284 >gi|195029951|ref|XP_001987835.1| GH19733 [Drosophila grimshawi] gi|193903835|gb|EDW02702.1| GH19733 [Drosophila grimshawi] Length = 1023 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 116/514 (22%), Positives = 223/514 (43%), Gaps = 49/514 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD+ AR+ R G + L GTDE+G A Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIFARYSRAAGYNTLLICGTDEYGTATENKALAE 315 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 +T + D+ + I +D F RTT + D + +K + + G I Sbjct: 316 NMTPREICDKYFELHNSIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVYNAGYILTESVE 375 Query: 126 GWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWMEEEGYFFR------- 168 + + + D V Y+ A G + V E + Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELVRPRCKVCNTAPV 435 Query: 169 LSAYQDKLLSYYESHPEFILPIER---------RNEVISFVKSGLKDLSLSRKTFDWGIK 219 L + + L ++ P+ ++R R ++++ GLK ++R WGI Sbjct: 436 LRSSEQLFLDLPKAEPQLREWVDRVENGWTHNARVITRAWLREGLKPRCITRD-LKWGIP 494 Query: 220 IPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-------IGKDILRF 270 +P + + YVW DA Y++ T ++W D + + KD + F Sbjct: 495 VPHKNFEKKVFYVWFDAPFGYVSMTKRYTK---DYEQWWRPDANTDVQLFQFMAKDNVPF 551 Query: 271 HAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALR 326 H++ WP+ LL+ N L + + ++ ++ K SKS G + + +E G+ D R Sbjct: 552 HSVVWPSVLLAVNKGNTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDA-QETGIPADVWR 610 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 ++L G+D + + L R N++L N +GN V+R++ K++ +P + Sbjct: 611 FYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFSSTVPHV-VLAQD 669 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR--- 443 + +L++ +R L+ +M+ + + ++++ + Y Q+PW L K N D+ Sbjct: 670 EVVLLALINRELRGYINSMEKAKLRDGIRHLLAISRHGNGYMQTQQPWVLLKGNADQKTH 729 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A+T++ + + + LA LL ++P A ++F L Sbjct: 730 AATIIGLCINIACLLANLLFPYMPSTARQLFAQL 763 >gi|17540794|ref|NP_502196.1| Methionyl tRNA Synthetase family member (mrs-1) [Caenorhabditis elegans] gi|3915072|sp|Q20970|SYMC_CAEEL RecName: Full=Methionyl-tRNA synthetase, cytoplasmic; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|3877884|emb|CAA97803.1| C. elegans protein F58B3.5a, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 917 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 119/511 (23%), Positives = 217/511 (42%), Gaps = 44/511 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I+ A+ Y N PH+G+ ++ ADV AR+ L G + GTDE+G A Sbjct: 34 KRNILITAALPYVNNVPHLGNIIGCVLSADVFARYCNLRGHQTFYVGGTDEYGTATETKA 93 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G T + D+ + + + I + F RTT + C+ ++ K+ G Sbjct: 94 LQEGCTPRELCDKYHAIHKGIYEWFGIDFSHFGRTTTDHQTEICQDMFLKLHKNGYTSSQ 153 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWMEEEGYFFRLSA 171 Y + E + D V Y A G + N V + + + + + Sbjct: 154 SVDQLYCNQCEKFLADRFVTGTCPMCAYDDARGDQCDGCGKLINAVDLKDAKCHMCKATP 213 Query: 172 ----------YQDKLLSYYESHPEFILPIE----RRNEV---ISFVKSGLKDLSLSRKTF 214 DKL H + L E N V +++K GL ++R Sbjct: 214 EVKQSTHIFLSLDKLQQKTTEHLDRELAKEDNRWSSNAVGITKAWMKLGLDPRCITRD-L 272 Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKDILR 269 WG +P D + + YVW DA YL+ T + + +K P ++ + +GKD + Sbjct: 273 KWGTAVPLDGFEKKVFYVWFDAPIGYLSITKCVLGDNWTKWWKNPENVELFNFVGKDNVA 332 Query: 270 FHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVI--DPIEVIEEVGVDAL 325 FHA+ +P L AN + + + ++ ++ K SKS G I D + E + D Sbjct: 333 FHAVMFPCSQLGANDNYTVVNNLCATEYLNYEDTKFSKSRGTGIFGDAAQGTE-IPADIW 391 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 R++L+ +D + D +VN++L N +GN ++R++S + + G++P T Sbjct: 392 RFYLLYMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVANSFGGVVPEMN-LTN 450 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--- 442 D +LS + + + A+ ++++ ++Y AQ PW L K + + Sbjct: 451 DDAEVLSEIHNECMQWDKQFDGVHLKDAVKTILNVSRLGNQYMQAQTPWVLMKKDEEGKK 510 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 RA T++ V + +++LL +P ++ I Sbjct: 511 RAGTIIGVAANIAYHVSVLLYPIMPTISATI 541 >gi|289804263|ref|ZP_06534892.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 259 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 13/247 (5%) Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253 N++ + +SGL+ +SR +G +IP+ P YVW+DA Y+ + L + G Sbjct: 16 NKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTT 75 Query: 254 KF---WPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305 F W D H IGKDI+ FH+++WPA L ++ P +F HG++ G K+SK Sbjct: 76 SFDEYWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSK 135 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSR 364 S G I ++ D+LRY+ +++ D + + +RVNAD+ N + NL SR Sbjct: 136 SRGTFIKASTWLKHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASR 195 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + I K +DG++ A D + + I E +++ +A+ ++++L Sbjct: 196 NAGFINKRFDGVLAAELA----DPQLYKTFTDAAAVIGEAWESREFGKAIREIMALADVA 251 Query: 425 DRYFDAQ 431 +RY D Q Sbjct: 252 NRYVDEQ 258 >gi|109097438|ref|XP_001116063.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like isoform 4 [Macaca mulatta] Length = 900 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 125/511 (24%), Positives = 227/511 (44%), Gaps = 53/511 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 325 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 326 GLTPQEICDKYHIIHADIYRWFNISFDTFGRTTTPQQTKITQDIFQRLLTRGFVLQDTVE 385 Query: 126 GWYSLRDE--AYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 LR E A + D +G Y A+ + + L Q K+ Sbjct: 386 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCP 442 Query: 179 -YYESHPEFI-LP-IERRNE-------------------VISFVKSGLKDLSLSRKTFDW 216 +H F+ LP +E+R E S+++ GLK ++R W Sbjct: 443 VVQSTHHLFLDLPKLEKRLEEWLGRTLPGSDWTPNARFITRSWLRDGLKPRCITRD-LKW 501 Query: 217 GIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDIL 268 G +P + + YVW DA YL+ T Y D + ++W V + KD + Sbjct: 502 GTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVDLYQFMAKDNV 557 Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDAL 325 FH I +P L A N L + + ++ ++ K SKS G V + + D Sbjct: 558 PFHGIVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 617 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 R++L+ G+D + L + N++L N +GN ++R+ + K + G +P T Sbjct: 618 RFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPE-MVLTP 676 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPD-- 442 D+ +L+ + LQ + ++ I AL ++++ ++Y +PW+ +K + D Sbjct: 677 DDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGSEADRQ 736 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 RA TV + V + L+++LQ ++P ++ I Sbjct: 737 RAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767 >gi|325473110|gb|EGC76306.1| methionyl-tRNA synthetase [Treponema denticola F0402] Length = 792 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 113/507 (22%), Positives = 210/507 (41%), Gaps = 43/507 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 +++A+ Y N PH+G+ +++ ADV ARF RL + L+ GTDE+G A + Sbjct: 6 VTSALPYVNNFPHLGNLIQVLSADVFARFCRLKEYETLYICGTDEYGTATETKALEEKKS 65 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + ++ + +I++D F RT+ + + + ++ + G I + Y Sbjct: 66 PEELCSFYHAIHAEIYNWFNIAFDYFGRTSTPQQTEITQGIFNDLDKNGYITEHTIEQLY 125 Query: 129 SLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 + + D V Y GA G ++ +P E S Sbjct: 126 CPSCKRFLADRYVLGTCPSCSYDGARGDQCEHCGKLLDPTDLKEPRCSSCGASPEVRSTT 185 Query: 178 SYYESHPEFILPIER-----------RNEVISFVKSGLKDLSLSR---KTFDWGIKIPDD 223 Y + P+ + E+ N + KS L+D R + WGI +P Sbjct: 186 HLYINLPKIVPEYEKWMPKTAEDGRWSNNALQMSKSWLRDGLQERAITRDLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAIYW 275 + YVW DA Y++ T + G K W D IGKD + FH + + Sbjct: 246 GFEDKVFYVWFDAPIGYISITKCWADLAGKDWKAWWLDQNDVELFQFIGKDNIPFHTVIF 305 Query: 276 PAFLLSANLPLPKKVFSHG--FILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVRE 332 P L+ + K G ++ ++ K SKS G + + E + D R+++ Sbjct: 306 PCSLIGSGKNWTKLFHMSGTEYLNYENGKFSKSKGVGVFGNDAKESGIPADMWRFYIFYN 365 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + ++RVN++L + NLV+R+ + + + YDG IP E I S Sbjct: 366 RPEKNDTQFTWKDFQERVNSELIGNLCNLVNRTATFVHRYYDGKIPQVDGAKSGREDIKS 425 Query: 393 V-------CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 + S ++I E + + + +L S ++ F +PW+ ++T+P+ A Sbjct: 426 MVKSLREAASASFKKITELSDWAELRDSFHEAFALSSVANKAFQDGEPWKRRETDPEYAE 485 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472 ++ +I+ + IL+ ++P+ A++ Sbjct: 486 ALMAELCYLIKDILILIHPYMPQYADQ 512 >gi|308456710|ref|XP_003090777.1| hypothetical protein CRE_09872 [Caenorhabditis remanei] gi|308260732|gb|EFP04685.1| hypothetical protein CRE_09872 [Caenorhabditis remanei] Length = 934 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 119/519 (22%), Positives = 222/519 (42%), Gaps = 59/519 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I+ A+ Y N PH+G+ ++ ADV AR+ L G + GTDE+G A Sbjct: 48 KRNILITAALPYVNNVPHLGNIIGCVLSADVFARYCNLRGHQTFYVGGTDEYGTATETKA 107 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T + D+ + + + I + F RTT + C+ ++ K+ G Sbjct: 108 LQEKCTPRELCDKYHTIHKGIYEWFGIDFTHFGRTTTDHQTEICQDMFMKLHQNG----- 162 Query: 123 CYSGWYSLRDEAYYN--------------------DDEVYKGADG--------QYYNAQH 154 Y+ S+ D+ + N DD DG + NA+ Sbjct: 163 -YTSTQSV-DQLFCNNCDKFLADRFVTGTCPYCAYDDARGDQCDGCGKLINAVELKNAKC 220 Query: 155 NPVQWMEE----EGYFFRLSAYQDKLLSYYE----SHPEFILPIERRNEVISFVKSGLKD 206 + + E F L Q+K Y + +P+ S+ K GL+ Sbjct: 221 HMCKSAPEVKQSTHIFLSLDKLQEKTAKYLDVVMNDNPDSRWSANAVGITNSWTKLGLEP 280 Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-- 262 ++R WG +P + + + YVW DA YL+ T + D +K P ++ + Sbjct: 281 RCITRD-LKWGTPVPLEGFEKKVFYVWFDAPIGYLSITKCVLGDDWTKWWKNPKNVELYN 339 Query: 263 -IGKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 +GKD + FHA+ +P L AN + + + ++ ++ K SKS G I + + Sbjct: 340 FVGKDNVAFHAVMFPCSQLGANDNYTVVNHLCATEYLNYEDTKFSKSRGTGIFG-DAAQG 398 Query: 320 VGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 G+ D R++L+ +D + D +VN++L N +GN ++R++S + + G+I Sbjct: 399 TGIPADIWRFYLLYMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVSNFFGGVI 458 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P T++D L ++ ++ + + A+ ++++ ++Y AQ PW L Sbjct: 459 PEI-QLTDADAEFLEEVNKECEQWDKQFDRVHLKDAVKSILNVSRLGNQYMQAQTPWVLM 517 Query: 438 KTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 K + + RA T++ V + LA++L +P ++ I Sbjct: 518 KGSDEEKKRAGTIIGVAANIAYHLAVILYPVMPSISATI 556 >gi|269215053|ref|ZP_06159011.1| methionine--tRNA ligase [Neisseria lactamica ATCC 23970] gi|269208418|gb|EEZ74873.1| methionine--tRNA ligase [Neisseria lactamica ATCC 23970] Length = 462 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 14/277 (5%) Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL------DNPDGSKAK 254 ++ L D +SR +G +IPD P YVW+DA Y+ + L D + KA Sbjct: 10 ETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCGRIGIDFDEYFKAG 69 Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 H IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I Sbjct: 70 SQTEMYHFIGKDILYFHALFWPAMLHFSGHRSPTGVYAHGFLTVDGQKMSKSRGTFITAK 129 Query: 315 EVIEE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 +E+ + + +RY++ ++ +D + RVN+DL N+ +R+ I K Sbjct: 130 SYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKR 189 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 ++G + SD ++L+ + + I E +N+ +AL +++L V+ Y DA K Sbjct: 190 FEGKLKDV-----SDSALLAKLTAQSEAIAECYENREYAKALRDIMALADAVNEYVDANK 244 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 PWEL K + + V E+I IL P L Sbjct: 245 PWELAKQE-GQDERLHEVCSELINAFTILTAYLAPVL 280 >gi|194757892|ref|XP_001961196.1| GF13746 [Drosophila ananassae] gi|190622494|gb|EDV38018.1| GF13746 [Drosophila ananassae] Length = 1020 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 122/520 (23%), Positives = 229/520 (44%), Gaps = 55/520 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ AD+ AR+ R G + L GTDE+G A Sbjct: 253 QRNVLITSALPYVNNVPHLGNIIGCVLSADIFARYSRSAGYNTLLICGTDEYGTATENKA 312 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 +T + D+ + I +D F RTT + D + +K + G I K Sbjct: 313 LAENLTPREICDKYFELHNSIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLSAGYIIKE 372 Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME---------EE 163 + + + D V Y+ A G + V E Sbjct: 373 SVEQLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELIRPRCKVCNS 432 Query: 164 GYFFRLSAYQDKL-LSYYESHPEFILPIERRN-------EVIS--FVKSGLKDLSLSRKT 213 R S D+L + ++ P+ +++ +VI+ ++K GLK ++R Sbjct: 433 APVIRSS---DQLFIDLPKAEPQLKDWVDKSEGGWTNNAKVITRAWLKEGLKPRCITRD- 488 Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD------LHVIG 264 WGI +P + + YVW DA Y++ T ++W PA + Sbjct: 489 LKWGIPVPHKGFEKKVFYVWFDAPFGYVSMTKRYTK---EYQQWWQPAKGTDVELFQFMA 545 Query: 265 KDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 KD + FH++ WP+ LL+ N L + + ++ ++ K SKS G + + +E G+ Sbjct: 546 KDNVPFHSVVWPSILLAVNKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDA-QETGI 604 Query: 323 --DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D R++L G+D + + L R N++L N +GN V+R++ K+++ +P Sbjct: 605 PADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFNSTVPEV 664 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 A T+ + +L++ +R L+ +M+ + + ++++ + Y Q+PW L K + Sbjct: 665 -ALTQDELILLALINRELKGYINSMEKAKLRDGIRHLLAVSRHGNGYMQTQQPWVLLKGS 723 Query: 441 PD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + RA+T++ ++ + LA LL ++P A +F L Sbjct: 724 DEQKKRAATIIGLSANIACLLANLLFPYMPTTARTLFSQL 763 >gi|125807237|ref|XP_001360316.1| GA13491 [Drosophila pseudoobscura pseudoobscura] gi|54635488|gb|EAL24891.1| GA13491 [Drosophila pseudoobscura pseudoobscura] Length = 1021 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 119/521 (22%), Positives = 219/521 (42%), Gaps = 63/521 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD+ AR+ R G + L GTDE+G A Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIFARYSRCAGYNTLLICGTDEYGTATENKALAE 315 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 +T + D+ + I +D F RTT + D + +K + G I Sbjct: 316 NMTPREICDKYFELHNSIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVHSAGYIITESVE 375 Query: 126 GWYSLRDEAYYNDDEV-----YKGAD------------GQYYNAQH---------NPVQW 159 + + + D V + G G+ NA N Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGCGYADARGDQCDKCGKLVNATELIRPRCKVCNTAPI 435 Query: 160 MEEEGYFF--------RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211 + F RL + DK + + + + I ++++ GLK ++R Sbjct: 436 LRSSDQLFIDLPKAEPRLREWVDKAENGWTHNAKVI--------TRAWLREGLKPRCITR 487 Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD------LHV 262 WGI +P + + YVW DA Y++ T K+W PA Sbjct: 488 D-LKWGIPVPHSGFEKKVFYVWFDAPFGYVSMTKRYTK---EYQKWWQPAKGTDVELFQF 543 Query: 263 IGKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEE 319 + KD + FH++ WP+ LL+ N L + + ++ ++ K SKS G V Sbjct: 544 MAKDNVPFHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQATG 603 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 + D R++L G+D + + L R N++L N +GN V+R++ K+++ ++P Sbjct: 604 IPADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFNSIVPE 663 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 A TE + +L++ +R L+ +++ + + ++++ + Y Q+PW L K Sbjct: 664 VVA-TEEELILLALVNRELRGYINSLEKAKLRDGIRHLLAISRHGNGYMQTQQPWVLLKG 722 Query: 440 NPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + RA+T++ + + LA LL ++P A +F L Sbjct: 723 SDEQKKRAATIIGLCANIACLLANLLFPYMPSTARTLFAQL 763 >gi|308491426|ref|XP_003107904.1| CRE-MARS-1 protein [Caenorhabditis remanei] gi|308249851|gb|EFO93803.1| CRE-MARS-1 protein [Caenorhabditis remanei] Length = 920 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 119/519 (22%), Positives = 222/519 (42%), Gaps = 59/519 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I+ A+ Y N PH+G+ ++ ADV AR+ L G + GTDE+G A Sbjct: 34 KRNILITAALPYVNNVPHLGNIIGCVLSADVFARYCNLRGHQTFYVGGTDEYGTATETKA 93 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T + D+ + + + I + F RTT + C+ ++ K+ G Sbjct: 94 LQEKCTPRELCDKYHTIHKGIYEWFGIDFTHFGRTTTDHQTEICQDMFMKLHQNG----- 148 Query: 123 CYSGWYSLRDEAYYN--------------------DDEVYKGADG--------QYYNAQH 154 Y+ S+ D+ + N DD DG + NA+ Sbjct: 149 -YTSTQSV-DQLFCNNCDKFLADRFVTGTCPYCAYDDARGDQCDGCGKLINAVELKNAKC 206 Query: 155 NPVQWMEE----EGYFFRLSAYQDKLLSYYE----SHPEFILPIERRNEVISFVKSGLKD 206 + + E F L Q+K Y + +P+ S+ K GL+ Sbjct: 207 HMCKSAPEVKQSTHIFLSLDKLQEKTAKYLDVVMNDNPDSRWSANAVGITNSWTKLGLEP 266 Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-- 262 ++R WG +P + + + YVW DA YL+ T + D +K P ++ + Sbjct: 267 RCITRD-LKWGTPVPLEGFEKKVFYVWFDAPIGYLSITKCVLGDDWTKWWKNPKNVELYN 325 Query: 263 -IGKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 +GKD + FHA+ +P L AN + + + ++ ++ K SKS G I + + Sbjct: 326 FVGKDNVAFHAVMFPCSQLGANDNYTVVNHLCATEYLNYEDTKFSKSRGTGIFG-DAAQG 384 Query: 320 VGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 G+ D R++L+ +D + D +VN++L N +GN ++R++S + + G+I Sbjct: 385 TGIPADIWRFYLLYMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVSNFFGGVI 444 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P T++D L ++ ++ + + A+ ++++ ++Y AQ PW L Sbjct: 445 PEI-QLTDADAEFLEEVNKECEQWDKQFDRVHLKDAVKSILNVSRLGNQYMQAQTPWVLM 503 Query: 438 KTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 K + + RA T++ V + LA++L +P ++ I Sbjct: 504 KGSDEEKKRAGTIIGVAANIAYHLAVILYPVMPSISATI 542 >gi|42526573|ref|NP_971671.1| methionyl-tRNA synthetase [Treponema denticola ATCC 35405] gi|68565989|sp|Q73NT9|SYM_TREDE RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|41816766|gb|AAS11552.1| methionyl-tRNA synthetase [Treponema denticola ATCC 35405] Length = 793 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 113/507 (22%), Positives = 210/507 (41%), Gaps = 43/507 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 +++A+ Y N PH+G+ +++ ADV ARF RL + L+ GTDE+G A + Sbjct: 6 VTSALPYVNNFPHLGNLIQVLSADVFARFCRLKEYETLYICGTDEYGTATETKALEEKKS 65 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + ++ + +I++D F RT+ + + + ++ + G I + Y Sbjct: 66 PEELCSFYHAIHAEIYNWFNIAFDYFGRTSTPQQTEITQGIFNDLDKNGYITEHTIEQLY 125 Query: 129 SLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 + + D V Y GA G ++ +P E + Sbjct: 126 CPSCKRFLADRYVLGTCPSCSYDGARGDQCEHCGKLLDPTDLKEPRCSSCGAAPEVRSTT 185 Query: 178 SYYESHPEFILPIER-----------RNEVISFVKSGLKDLSLSR---KTFDWGIKIPDD 223 Y + P+ + E+ N + KS L+D R + WGI +P Sbjct: 186 HLYINLPKIVPEYEKWMPKTAEEGRWSNNALQMSKSWLRDGLQERAITRDLKWGIPVPKK 245 Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAIYW 275 + YVW DA Y++ T + G K W D IGKD + FH + + Sbjct: 246 GFEDKVFYVWFDAPIGYISITKCWADLAGKDWKAWWLDQNDVELFQFIGKDNIPFHTVIF 305 Query: 276 PAFLLSANLPLPKKVFSHG--FILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVRE 332 P L+ + K G ++ ++ K SKS G + + E + D R+++ Sbjct: 306 PCSLIGSGKNWTKLFHMSGTEYLNYENGKFSKSKGVGVFGNDAKESGIPADMWRFYIFYN 365 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 D + ++RVN++L + NLV+R+ + I + YDG IP E I S Sbjct: 366 RPEKNDTQFTWKDFQERVNSELIGNLCNLVNRTATFIHRYYDGKIPQVDGAKSGREDIKS 425 Query: 393 V-------CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 + S ++I E + + + +L S ++ F +PW+ ++T+P+ A Sbjct: 426 MVKSLREAASASFKKITELSDWAELRDSFHEAFALSSVANKAFQDGEPWKRRETDPEYAE 485 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472 ++ +I+ + IL+ ++P+ A++ Sbjct: 486 ALMSELCYLIKDILILIHPYMPQYADQ 512 >gi|225554399|gb|EEH02697.1| methionyl-tRNA synthetase [Ajellomyces capsulatus G186AR] Length = 596 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 124/518 (23%), Positives = 228/518 (44%), Gaps = 48/518 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV ARF R G+ L+ GTDE+G A Sbjct: 17 KRNVLITSALPYVNNVPHLGNIIGSVLSADVFARFCRGRGIPTLYIGGTDEYGTTTEAKA 76 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T + D+ ++ DIS+D F RTT + D + +++K+ + G + + Sbjct: 77 LIEKCTPRELCDKYHAIHAEIYQWFDISFDIFGRTTTQLQTDITQDIFRKLYNNGFLKER 136 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN---PVQWMEE----EGY-- 165 + Y +++ D V Y A G + P+Q +G+ Sbjct: 137 MTTQLYCQEHQSFLADRFVEGECPTCSYTDARGDQCDMCGQLLEPLQLKNPRCKIDGFAP 196 Query: 166 --------FFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 F L Q ++ Y+ ++ P ++ ++++K GL+ S++R W Sbjct: 197 ITKDTKHIFLELDKLQPEVEDYFRKASTNGAWPNNGKSITLAWLKEGLQPRSITRD-MKW 255 Query: 217 GIKIPDDPQY---IMYVWIDALTNYLTTTG-YLDNPDGSKAKFW--PADLHV---IGKDI 267 G ++P P Y ++Y W DA Y++ T Y D + K+W P D+ + IGKD Sbjct: 256 GTQVPL-PGYEDKVIYSWFDACIGYVSITAKYTDQWE----KWWRNPEDVQLYQFIGKDN 310 Query: 268 LRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324 + FH++ +PA + P K + + ++ ++G K SKS G V V D Sbjct: 311 VVFHSVIFPATQVGTRGPWTKVHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQQTGVSADV 370 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAF 383 RY+L+ D + D N+ L N +GN SR + + + Y+ ++P + Sbjct: 371 WRYYLLSRRPETGDTEFSWDSFISANNSILLNNLGNFASRVLKFVNSRFYNNIVPDWTKY 430 Query: 384 TESDESIL-SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNP 441 E I +R+L + E + + LA + + + + + K +L ++ P Sbjct: 431 HEPSFEIWKEEINRLLTKYVEELDAVKLRAGLATALHISQQGNLFLQTNKLDGKLHESEP 490 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + + V+ +TV +I LA ++ ++P + I L V Sbjct: 491 AKCAAVIGLTVNLIHLLASVIAPYMPATSKSICTQLRV 528 >gi|225024824|ref|ZP_03714016.1| hypothetical protein EIKCOROL_01711 [Eikenella corrodens ATCC 23834] gi|224942427|gb|EEG23636.1| hypothetical protein EIKCOROL_01711 [Eikenella corrodens ATCC 23834] Length = 463 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 84/280 (30%), Positives = 136/280 (48%), Gaps = 15/280 (5%) Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD 259 ++ L D +SR +G +IPD P YVW+DA Y+ + L + G +++ AD Sbjct: 10 ETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAD 69 Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 H IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I Sbjct: 70 SQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAK 129 Query: 315 EVIEE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 +E+ + + +RY++ ++ +D + RVN+DL N+ +R+ I K Sbjct: 130 SYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKR 189 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 ++G + S ++L+ + I E +N+ RAL +++L V+ Y DA K Sbjct: 190 FEGRLKNV-----SGSALLAKLAAESDNIAEQYENREYARALRDIMALADAVNEYVDANK 244 Query: 433 PWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 PWEL K +R V + L L +P+ A Sbjct: 245 PWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTA 284 >gi|294670986|ref|ZP_06735842.1| hypothetical protein NEIELOOT_02692 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307473|gb|EFE48716.1| hypothetical protein NEIELOOT_02692 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 463 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 85/280 (30%), Positives = 137/280 (48%), Gaps = 15/280 (5%) Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD 259 ++ L D +SR +G +IPD P YVW+DA Y+ + L + G +++ AD Sbjct: 10 ETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAD 69 Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 H IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I Sbjct: 70 SQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAK 129 Query: 315 EVIEE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 +E+ + + +RY++V ++ +D + RVN+DL N+ +R+ I K Sbjct: 130 SYLEKGLNPEWMRYYIVAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKR 189 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 ++G + S ++L+ + I E +N+ RAL +++L V+ Y DA K Sbjct: 190 FEGRLKDV-----SGSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANK 244 Query: 433 PWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 PWEL K +R V + L L +P+ A Sbjct: 245 PWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTA 284 >gi|328769498|gb|EGF79542.1| hypothetical protein BATDEDRAFT_12267 [Batrachochytrium dendrobatidis JAM81] Length = 647 Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 114/511 (22%), Positives = 217/511 (42%), Gaps = 42/511 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + I++A+ Y N PH+G+ ++ ADV AR+ R+ G +VLF GTDE+G Sbjct: 3 KNERNVLITSALPYVNNIPHLGNLIGSVLSADVYARYSRIRGENVLFICGTDEYGTATET 62 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A ++ K D+ + + I +D F RT ++ + ++ K+ G + Sbjct: 63 KAIEEKLSCKQLCDKYFKFHDETYKWFQIDFDHFGRTITEQQTIITQDIYLKLEKNGHVM 122 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME----------- 161 + + Y + E++ D V Y+ A G ++ + +E Sbjct: 123 EDTVTQLYCNQHESFLADRFVEGTCPLCGYEDARGDQCDSCGKLLNAIELKNPRCKLDNA 182 Query: 162 ------EEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + F L+ Q+KL +++ + E + S++K GLK ++R Sbjct: 183 APVARDSKHLFLNLTGQQEKLTEWFKKASSEGCWSANSQTITNSWLKEGLKPRCITRD-L 241 Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDI 267 WG +P + + YVW DA Y + T N +W P D+ + +GKD Sbjct: 242 KWGTPVPKEGYENKVFYVWFDAPIGYFSITA---NYTKDWELWWKNPKDVKLYQFMGKDN 298 Query: 268 LRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324 + FH + +P+ LL N L + + ++ ++ K SKS G + V++ + V+ Sbjct: 299 VPFHTVIFPSTLLGTNENWTLLHHLSTTEYLQYESGKFSKSRGVGVFGNNVVDSGIPVEV 358 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 RY+L+ D ++ + N +L +GN V+R V I YDG+IP Sbjct: 359 WRYYLLSIRPESGDSYFSWNSFIAANNTELLANLGNFVNRLVKFINAKYDGVIPAYKTTG 418 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDR 443 E + ++S + +L + E + + I L + + + + Y + L + +R Sbjct: 419 EPETKLISSVNTLLHQFIEALNDVKIRTGLRLFMDISARGNLYLQENRIDNSLFANSRER 478 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 V+ V + ++ ++ ++P + I Sbjct: 479 CDNVVAVAANLAYLISAVVYPYMPSTSEGIL 509 >gi|47570442|ref|ZP_00241078.1| methionyl-tRNA synthetase [Bacillus cereus G9241] gi|47552900|gb|EAL11315.1| methionyl-tRNA synthetase [Bacillus cereus G9241] Length = 120 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 55/118 (46%), Positives = 79/118 (66%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E + YI+T I YP+ + HIGHAY + D +AR+ R+ G +V + TGTDEHGQKI K Sbjct: 3 EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ VT + +VD +++ + +DISYDDFIRTTE RH D ++K++ D+GDI Sbjct: 63 AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDI 120 >gi|288575952|ref|ZP_06394074.1| methionine--tRNA ligase [Neisseria mucosa ATCC 25996] gi|288566634|gb|EFC88194.1| methionine--tRNA ligase [Neisseria mucosa ATCC 25996] Length = 462 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 84/280 (30%), Positives = 136/280 (48%), Gaps = 15/280 (5%) Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD 259 ++ L D +SR +G +IPD P YVW+DA Y+ + L + G +++ AD Sbjct: 10 ETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAD 69 Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 H IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I Sbjct: 70 SQTEMYHFIGKDILYFHALFWPAMLHFSGHRTPTGVYAHGFLTVDGQKMSKSRGTFITAK 129 Query: 315 EVIEE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 +E+ + + +RY++ ++ +D + RVN+DL N+ +R+ I K Sbjct: 130 SYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKH 189 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 ++G + S ++L+ + I E +N+ RAL +++L V+ Y DA K Sbjct: 190 FEGRLKDV-----SGSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANK 244 Query: 433 PWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 PWEL K +R V + L L +P+ A Sbjct: 245 PWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTA 284 >gi|228968149|ref|ZP_04129152.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto str. T04001] gi|228791541|gb|EEM39140.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto str. T04001] Length = 425 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 88/336 (26%), Positives = 159/336 (47%), Gaps = 23/336 (6%) Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDW 216 E E ++F L +Q ++ E E R+ I +VK GL+D ++SR Sbjct: 62 ETEHFYFALHTFQQQIKKVVEIAKE---KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPI 117 Query: 217 GIKIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADL---HVIGKDIL 268 G+ IP +D + +YVWI+A+ Y + + Y G +FW +D +V GKD + Sbjct: 118 GVPIPVKGYEDKK--IYVWIEAVAGYYSASKYWAEETGKDDHEFWNSDAQTYYVHGKDNI 175 Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 FH+I WPA LL +P+ + S+ ++ + K+S S + +++E D++RY Sbjct: 176 PFHSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRY 235 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 FL +D + N++L GN V+R++ I K YDG++P E Sbjct: 236 FLTVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPQGTINVELK 295 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 + + + + + E ++ AL + V ++YFD ++PW+ ++ NP Sbjct: 296 DKV----EGLYKNVGEAIEQTTFKVALETIFDAVRFANKYFDERQPWKEREDNPVSCEET 351 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 +Y + +I A LL+ F+P + ++ L + + N Sbjct: 352 IYNCIYLIANFANLLEPFLPFSSERVRSTLSIVNRN 387 >gi|122937774|gb|ABM68611.1| AAEL014709-PA [Aedes aegypti] Length = 1019 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 123/515 (23%), Positives = 215/515 (41%), Gaps = 49/515 (9%) Query: 9 ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N PH+G+ ++ ADV AR+ RL G + L+ GTDE+G A + Sbjct: 260 ITSALPYVNNVPHLGNIIGCVLSADVFARYSRLCGYNTLYICGTDEYGTATETKALAENL 319 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K D+ + I +D F RTT + ++K + G I Sbjct: 320 TPKQICDKYFEIHNSIYRWFGIGFDYFGRTTTAEQTQIVQDMFKDLYAGGFIETRAVDQL 379 Query: 128 YSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME---------------- 161 + + Y D V Y+ A G +A + +E Sbjct: 380 LCQKCDRYLADRFVEGTCPYPGCGYEDARGDQCDACGKLINAIELVRPRCKVCNTSPIIR 439 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 +F L + KL + + E R +++K GLK ++R WGI + Sbjct: 440 QSSQFFLDLPKIEPKLREWVDKA-EHGWTHNARVITRAWLKEGLKSRCITRD-LKWGIPV 497 Query: 221 PDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLH-VIGKDILRFH 271 P + + YVW DA Y++ T ++W DL+ + KD + FH Sbjct: 498 PLEGYEDKVFYVWFDAPIGYISMTSRYSK---EWKQWWQPSAETKVDLYQFMAKDNVPFH 554 Query: 272 AIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328 ++ +PA L+ + L + + ++ ++ K SKS G V + D R++ Sbjct: 555 SVMFPASLIGIDKGYTLVSHIMATEYLNYEDGKFSKSRGVGVFGNDAHDTGIPADVWRFY 614 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L G+D + + L R N +L +GN V+R++ K +D +IP P E D Sbjct: 615 LCSSRPEGQDSSFSWNDLAARNNNELLKNLGNFVNRALVFCEKYFDSIIP-PMVLNEEDF 673 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RAS 445 ++L++ +R L+ M+ + + ++ + ++ A++PW L K D RA Sbjct: 674 TLLALINRDLKGYVHQMEKARLRDGIRHLLGISRYGNQLMQAEEPWVLVKGTDDQKTRAG 733 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 TV+ + + LA L+ F+P A ++ L V+ Sbjct: 734 TVIGLCCNLACVLATLIFPFMPSTARNLYAQLNVS 768 >gi|255065400|ref|ZP_05317255.1| methionine--tRNA ligase [Neisseria sicca ATCC 29256] gi|255050225|gb|EET45689.1| methionine--tRNA ligase [Neisseria sicca ATCC 29256] Length = 462 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 84/280 (30%), Positives = 136/280 (48%), Gaps = 15/280 (5%) Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD 259 ++ L D +SR +G +IPD P YVW+DA Y+ + L + G +++ AD Sbjct: 10 ETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAD 69 Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 H IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I Sbjct: 70 SQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAK 129 Query: 315 EVIEE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 +E+ + + +RY++ ++ +D + RVN+DL N+ +R+ I K Sbjct: 130 SYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKR 189 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 ++G + S ++L+ + I E +N+ RAL +++L V+ Y DA K Sbjct: 190 FEGRLKDV-----SGSALLAKLAAESSAIAEQYENREYARALRDIMALADAVNEYVDANK 244 Query: 433 PWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 PWEL K +R V + L L +P+ A Sbjct: 245 PWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTA 284 >gi|157105436|ref|XP_001648869.1| methionine-tRNA synthetase [Aedes aegypti] gi|108869023|gb|EAT33248.1| methionine-tRNA synthetase [Aedes aegypti] Length = 966 Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 123/515 (23%), Positives = 215/515 (41%), Gaps = 49/515 (9%) Query: 9 ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N PH+G+ ++ ADV AR+ RL G + L+ GTDE+G A + Sbjct: 260 ITSALPYVNNVPHLGNIIGCVLSADVFARYSRLCGYNTLYICGTDEYGTATETKALAENL 319 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K D+ + I +D F RTT + ++K + G I Sbjct: 320 TPKQICDKYFEIHNSIYRWFGIGFDYFGRTTTAEQTQIVQDMFKDLYAGGFIETRAVDQL 379 Query: 128 YSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME---------------- 161 + + Y D V Y+ A G +A + +E Sbjct: 380 LCQKCDRYLADRFVEGTCPYPGCGYEDARGDQCDACGKLINAIELVRPRCKVCNTSPIIR 439 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 +F L + KL + + E R +++K GLK ++R WGI + Sbjct: 440 QSSQFFLDLPKIEPKLREWVDKA-EHGWTHNARVITRAWLKEGLKSRCITRD-LKWGIPV 497 Query: 221 PDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLH-VIGKDILRFH 271 P + + YVW DA Y++ T ++W DL+ + KD + FH Sbjct: 498 PLEGYEDKVFYVWFDAPIGYISMTSRYSK---EWKQWWQPSAETKVDLYQFMAKDNVPFH 554 Query: 272 AIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328 ++ +PA L+ + L + + ++ ++ K SKS G V + D R++ Sbjct: 555 SVMFPASLIGIDKGYTLVSHIMATEYLNYEDGKFSKSRGVGVFGNDAHDTGIPADVWRFY 614 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L G+D + + L R N +L +GN V+R++ K +D +IP P E D Sbjct: 615 LCSSRPEGQDSSFSWNDLAARNNNELLKNLGNFVNRALVFCEKYFDSIIP-PMVLNEEDF 673 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RAS 445 ++L++ +R L+ M+ + + ++ + ++ A++PW L K D RA Sbjct: 674 TLLALINRDLKGYVHQMEKARLRDGIRHLLGISRYGNQLMQAEEPWVLVKGTDDQKTRAG 733 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 TV+ + + LA L+ F+P A ++ L V+ Sbjct: 734 TVIGLCCNLACVLATLIFPFMPSTARNLYAQLNVS 768 >gi|157106644|ref|XP_001649418.1| methionine-tRNA synthetase [Aedes aegypti] gi|108868809|gb|EAT33034.1| methionine-tRNA synthetase [Aedes aegypti] Length = 966 Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 123/515 (23%), Positives = 215/515 (41%), Gaps = 49/515 (9%) Query: 9 ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N PH+G+ ++ ADV AR+ RL G + L+ GTDE+G A + Sbjct: 260 ITSALPYVNNVPHLGNIIGCVLSADVFARYSRLCGYNTLYICGTDEYGTATETKALAENL 319 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T K D+ + I +D F RTT + ++K + G I Sbjct: 320 TPKQICDKYFEIHNSIYRWFGIGFDYFGRTTTAEQTQIVQDMFKDLYAGGFIETRAVDQL 379 Query: 128 YSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME---------------- 161 + + Y D V Y+ A G +A + +E Sbjct: 380 LCQKCDRYLADRFVEGTCPYPGCGYEDARGDQCDACGKLINAIELVRPRCKVCNTSPIIR 439 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 +F L + KL + + E R +++K GLK ++R WGI + Sbjct: 440 QSSQFFLDLPKIEPKLREWVDKA-EHGWTHNARVITRAWLKEGLKSRCITRD-LKWGIPV 497 Query: 221 PDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLH-VIGKDILRFH 271 P + + YVW DA Y++ T ++W DL+ + KD + FH Sbjct: 498 PLEGYEDKVFYVWFDAPIGYISMTSRYSK---EWKQWWQPSAETKVDLYQFMAKDNVPFH 554 Query: 272 AIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328 ++ +PA L+ + L + + ++ ++ K SKS G V + D R++ Sbjct: 555 SVMFPASLIGIDKGYTLVSHIMATEYLNYEDGKFSKSRGVGVFGNDAHDTGIPADVWRFY 614 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L G+D + + L R N +L +GN V+R++ K +D +IP P E D Sbjct: 615 LCSSRPEGQDSSFSWNDLAARNNNELLKNLGNFVNRALVFCEKYFDSIIP-PMVLNEEDF 673 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RAS 445 ++L++ +R L+ M+ + + ++ + ++ A++PW L K D RA Sbjct: 674 TLLALINRDLKGYVHQMEKARLRDGIRHLLGISRYGNQLMQAEEPWVLVKGTDDQKTRAG 733 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 TV+ + + LA L+ F+P A ++ L V+ Sbjct: 734 TVIGLCCNLACVLATLIFPFMPSTARNLYAQLNVS 768 >gi|297692235|ref|XP_002823470.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like [Pongo abelii] Length = 900 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 122/512 (23%), Positives = 225/512 (43%), Gaps = 55/512 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 266 VLITSALPYVNNVPHLGNLIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEE 325 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 326 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLKRGFVLQDTVE 385 Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156 LR E A + D +G G+ NA + P Sbjct: 386 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCRSCP 442 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 V + F L + +L + + P R + S+++ GLK ++R Sbjct: 443 VV-QSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LK 500 Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDI 267 WG +P + + YVW DA YL+ T Y D + ++W V + KD Sbjct: 501 WGTPVPLEGFEDKVFYVWFDATFGYLSITANYTDQWE----RWWKNPEQVDLYQFMAKDN 556 Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324 + FH + +P L A N L + + ++ ++ K SKS G V + + D Sbjct: 557 VPFHGLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADI 616 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 R++L+ G+D + L + N++L N +GN ++R+ + K + G +P T Sbjct: 617 WRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPE-MVLT 675 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPD- 442 D+ +L+ + LQ + ++ I AL ++++ ++Y +PW+ +K + D Sbjct: 676 PDDKRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGSEADR 735 Query: 443 -RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 RA TV + V + L+++LQ ++P ++ I Sbjct: 736 QRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767 >gi|13940612|gb|AAK50414.1|AC021891_15 Putative methionyl-tRNA synthetase [Oryza sativa Japonica Group] Length = 596 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 123/527 (23%), Positives = 232/527 (44%), Gaps = 64/527 (12%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + +++A+ Y N PH+G+ ++ AD AR+ RL G +VL+ GTDE+G A Sbjct: 14 RRNVLVTSALPYVNNVPHLGNIIGCVLSADAFARYCRLRGHNVLYVCGTDEYGTATETKA 73 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G + + D+ +++ + DIS+D F RT+ + + C+ ++ K+ D + + Sbjct: 74 MEEGCSPREICDKYHAIHKEVYEWFDISFDIFGRTSSPQQTEVCQDIFLKLLDNNWLSEN 133 Query: 123 CYSGWYSLRDEAYYNDD--EVYKGADGQYYNAQH-----------NPVQWM--------- 160 Y + + D E Y +G Y++ N + + Sbjct: 134 TMQQLYCNSCQRFLADRLVEGYCPTEGCNYDSARGDQCEKCGKLLNSTELVNPKCKACHV 193 Query: 161 --------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI----SFVKSGLKDLS 208 + + F L ++KL Y + E L I +++K GLK Sbjct: 194 CGSTPCVRDTDHLFLELPLLREKLEKYID---ETSLTGSWSQNAIHATNAWLKEGLKPRC 250 Query: 209 LSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---I 263 ++R WG+ +P + + YVW DA Y++ T P+ K P ++ + + Sbjct: 251 ITRD-LKWGVPVPHEKYKDKVFYVWFDAPIGYISITACY-TPEWEKWWKNPENVELYQFM 308 Query: 264 GKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321 GKD + FH + +P+ LL N L K + ++ ++ K SK+ G I G Sbjct: 309 GKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKTKG--------IGVFG 360 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMI 377 DA + E + D + L+ + N +L N +GN ++R +S I K Y ++ Sbjct: 361 NDAKSTNIPPEAS---DTLFTWTDLQAKCNNELLNNLGNFINRVLSFIAKPEGTGYGSVV 417 Query: 378 P-TPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 P +P + + +S+ +++ + + M I + L +++ SE + Y + W+ Sbjct: 418 PDSPDVDSHALTQSLAETVGKLIDQYIDAMDKVKIKQGLKIAMAISSEGNAYLQESQFWK 477 Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 L K +P +TV+ +V ++ LA LL+ F+P + + L ++ E Sbjct: 478 LYKQDPASCATVMKTSVGIVYLLACLLEPFMPTFSKDVLQQLNLSPE 524 >gi|296212123|ref|XP_002752733.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like [Callithrix jacchus] Length = 830 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 119/516 (23%), Positives = 221/516 (42%), Gaps = 56/516 (10%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ER L I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G Sbjct: 185 ERNVL-ITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETK 243 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 244 AMEEGLTPQEICDKYHIIHADIYRWFNISFDVFGRTTTPQQTKITQDIFQRLLARGFVLQ 303 Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170 R + D E +G N V+ + + R Sbjct: 304 DTVEQLRCERCARFLADRFVEGVCPFCGFEEARGDQCDKCGKLINAVELKKPQCKVCRSC 363 Query: 171 AYQDKLLSYYESHPEFILPIERRNE-------------------VISFVKSGLKDLSLSR 211 + P+ +E+R E S+++ GLK ++R Sbjct: 364 PVVKSSQHLFLDLPK----LEKRLEEWLGRTLPGSDWTPNAWFITRSWLRDGLKPRCITR 419 Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----I 263 WG +P + + YVW DA YL+ T Y D + ++W V + Sbjct: 420 D-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVDLYQFM 474 Query: 264 GKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEV 320 KD + FH I +P L A N L + + ++ ++ K SKS G V + + Sbjct: 475 AKDNVPFHGIVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGI 534 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D R++L+ G+D + + + N++L N +GN ++R+ + K + G +P Sbjct: 535 PADIWRFYLLYMRPEGQDSTFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPE- 593 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKT 439 T D+ +L+ + L+ + ++ I AL ++++ ++Y +PW ++K + Sbjct: 594 MVLTPDDQRLLAHVTLELRHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKQIKGS 653 Query: 440 NPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 D RA TV + V + L+++LQ ++P ++ I Sbjct: 654 EADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 689 >gi|194881221|ref|XP_001974747.1| GG20938 [Drosophila erecta] gi|190657934|gb|EDV55147.1| GG20938 [Drosophila erecta] Length = 1021 Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 127/528 (24%), Positives = 233/528 (44%), Gaps = 77/528 (14%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD+ AR+ R G + L GTDE+G A Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTDEYGTATENKALAE 315 Query: 66 GVTTKVFVDQ-------------------NSRNFRDMADVLDISYDDFIRT----TEKRH 102 +T + D+ ++ D++ ++ D ++ TE Sbjct: 316 KLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITESVE 375 Query: 103 HDTC----RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH--NP 156 C R L + + + GC G+ R D+ K G+ NA P Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGC--GYEDARG------DQCDKC--GKLVNATELIRP 425 Query: 157 VQWMEEEGYFFRLSAYQDKL-LSYYESHPEFILPIERRN-------EVIS--FVKSGLKD 206 + R S D+L + ++ P+ +++ +VI+ ++K GLK Sbjct: 426 RCKVCNSAPVLRSS---DQLFIDLPKAEPQLKEWVDKSEGGWTHNAKVITRAWLKEGLKP 482 Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD---- 259 ++R WGI +P + + + YVW DA Y++ T ++W PA+ Sbjct: 483 RCITRD-LKWGIPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTK---EYQQWWQPAEGTDV 538 Query: 260 --LHVIGKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315 + KD + FH++ WP+ LL+ N L + + ++ ++ K SKS G + + Sbjct: 539 ELFQFMAKDNVPFHSVVWPSVLLAINKRHTLVSHIMATEYLNYEDGKFSKSRGIGVFGND 598 Query: 316 VIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +E G+ D R++L G+D + + L R N++L N +GN V+R++ K++ Sbjct: 599 A-QETGIPADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNF 657 Query: 374 DGMIPTPGAFTESDESI-LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 + +P T DE + L++ +R L+ +M+ + + ++S+ + Y +Q+ Sbjct: 658 NSTVPE--VVTTQDELVLLALINRELRGYINSMEKAKLRDGIRHLLSISRHCNGYMQSQQ 715 Query: 433 PWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 PW L K N D RAST++ + V + LA LL ++P A +F L Sbjct: 716 PWVLLKGNDDQKARASTIIGLCVNIACLLANLLFPYMPTTARTLFGQL 763 >gi|158255150|dbj|BAF83546.1| unnamed protein product [Homo sapiens] Length = 900 Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 124/521 (23%), Positives = 230/521 (44%), Gaps = 73/521 (14%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEE 325 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 326 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVE 385 Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156 LR E A + D +G G+ NA + P Sbjct: 386 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCP 442 Query: 157 VQWMEEEGYFF--------RLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKD 206 V ++ + F RL + + L S + + +FI S+++ GLK Sbjct: 443 V--VQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFI--------TRSWLRDGLKP 492 Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV- 262 ++R WG +P + + YVW DA YL+ T Y D + ++W V Sbjct: 493 RCITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVD 547 Query: 263 ----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIE 315 + KD + FH++ +P L A N L + + ++ ++ K SKS G V + Sbjct: 548 LYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMA 607 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 + D R++L+ G+D + L + N++L N +GN ++R+ + K + G Sbjct: 608 QDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGG 667 Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 +P T D+ +L+ + LQ + ++ I AL ++++ ++Y +PW+ Sbjct: 668 YVPE-MVLTPDDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWK 726 Query: 436 -LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +K + D RA TV + V + L+++LQ ++P ++ I Sbjct: 727 RIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767 >gi|62897093|dbj|BAD96487.1| methionine-tRNA synthetase variant [Homo sapiens] Length = 900 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 124/521 (23%), Positives = 230/521 (44%), Gaps = 73/521 (14%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEE 325 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 326 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVE 385 Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156 LR E A + D +G G+ NA + P Sbjct: 386 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCP 442 Query: 157 VQWMEEEGYFF--------RLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKD 206 V ++ + F RL + + L S + + +FI S+++ GLK Sbjct: 443 V--VQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFI--------TRSWLRDGLKP 492 Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV- 262 ++R WG +P + + YVW DA YL+ T Y D + ++W V Sbjct: 493 RCITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVD 547 Query: 263 ----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIE 315 + KD + FH++ +P L A N L + + ++ ++ K SKS G V + Sbjct: 548 LYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMA 607 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 + D R++L+ G+D + L + N++L N +GN ++R+ + K + G Sbjct: 608 QDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGG 667 Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 +P T D+ +L+ + LQ + ++ I AL ++++ ++Y +PW+ Sbjct: 668 YVPE-MVLTPDDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWK 726 Query: 436 -LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +K + D RA TV + V + L+++LQ ++P ++ I Sbjct: 727 RIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767 >gi|14043022|ref|NP_004981.2| methionyl-tRNA synthetase, cytoplasmic [Homo sapiens] gi|20178332|sp|P56192|SYMC_HUMAN RecName: Full=Methionyl-tRNA synthetase, cytoplasmic; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|7804468|dbj|BAA95668.1| methionyl tRNA synthetase [Homo sapiens] gi|12803161|gb|AAH02384.1| Methionyl-tRNA synthetase [Homo sapiens] gi|13623455|gb|AAH06328.1| Methionyl-tRNA synthetase [Homo sapiens] gi|15079642|gb|AAH11639.1| Methionyl-tRNA synthetase [Homo sapiens] gi|15080151|gb|AAH11849.1| Methionyl-tRNA synthetase [Homo sapiens] gi|30583515|gb|AAP36002.1| methionine-tRNA synthetase [Homo sapiens] gi|60656267|gb|AAX32697.1| methionine-tRNA synthetase [synthetic construct] gi|307686053|dbj|BAJ20957.1| methionyl-tRNA synthetase [synthetic construct] Length = 900 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 124/521 (23%), Positives = 230/521 (44%), Gaps = 73/521 (14%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEE 325 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 326 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVE 385 Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156 LR E A + D +G G+ NA + P Sbjct: 386 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCP 442 Query: 157 VQWMEEEGYFF--------RLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKD 206 V ++ + F RL + + L S + + +FI S+++ GLK Sbjct: 443 V--VQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFI--------TRSWLRDGLKP 492 Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV- 262 ++R WG +P + + YVW DA YL+ T Y D + ++W V Sbjct: 493 RCITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVD 547 Query: 263 ----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIE 315 + KD + FH++ +P L A N L + + ++ ++ K SKS G V + Sbjct: 548 LYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMA 607 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 + D R++L+ G+D + L + N++L N +GN ++R+ + K + G Sbjct: 608 QDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGG 667 Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 +P T D+ +L+ + LQ + ++ I AL ++++ ++Y +PW+ Sbjct: 668 YVPE-MVLTPDDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWK 726 Query: 436 -LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +K + D RA TV + V + L+++LQ ++P ++ I Sbjct: 727 RIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767 >gi|1702932|emb|CAA64381.1| yeast methionyl-tRNA synthetase homolog [Homo sapiens] Length = 900 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 124/521 (23%), Positives = 229/521 (43%), Gaps = 73/521 (14%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEE 325 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 326 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVE 385 Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156 LR E A + D +G G+ NA + P Sbjct: 386 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCP 442 Query: 157 VQWMEEEGYFF--------RLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKD 206 V ++ + F RL + + L S + + +FI S+++ GLK Sbjct: 443 V--VQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFI--------TRSWLRDGLKP 492 Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV- 262 ++R WG +P + + YVW DA YL+ T Y D + ++W V Sbjct: 493 RCITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVD 547 Query: 263 ----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIE 315 + KD + FH++ +P L A N L + + ++ ++ K SKS G V + Sbjct: 548 LYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMA 607 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 + D R++L+ G+D + L + N++L N +GN ++R+ + K + G Sbjct: 608 QDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGG 667 Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 +P T D+ +L + LQ + ++ I AL ++++ ++Y +PW+ Sbjct: 668 YVPE-MVLTPDDQRLLGHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWK 726 Query: 436 -LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +K + D RA TV + V + L+++LQ ++P ++ I Sbjct: 727 RIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767 >gi|15929104|gb|AAH15011.1| MARS protein [Homo sapiens] Length = 899 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 124/521 (23%), Positives = 230/521 (44%), Gaps = 73/521 (14%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 265 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEE 324 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 325 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVE 384 Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156 LR E A + D +G G+ NA + P Sbjct: 385 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCP 441 Query: 157 VQWMEEEGYFF--------RLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKD 206 V ++ + F RL + + L S + + +FI S+++ GLK Sbjct: 442 V--VQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFI--------TRSWLRDGLKP 491 Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV- 262 ++R WG +P + + YVW DA YL+ T Y D + ++W V Sbjct: 492 RCITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVD 546 Query: 263 ----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIE 315 + KD + FH++ +P L A N L + + ++ ++ K SKS G V + Sbjct: 547 LYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMA 606 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 + D R++L+ G+D + L + N++L N +GN ++R+ + K + G Sbjct: 607 QDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGG 666 Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 +P T D+ +L+ + LQ + ++ I AL ++++ ++Y +PW+ Sbjct: 667 YVPE-MVLTPDDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWK 725 Query: 436 -LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +K + D RA TV + V + L+++LQ ++P ++ I Sbjct: 726 RIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 766 >gi|114644161|ref|XP_509164.2| PREDICTED: methionine-tRNA synthetase [Pan troglodytes] Length = 900 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 124/521 (23%), Positives = 230/521 (44%), Gaps = 73/521 (14%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEE 325 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 326 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVE 385 Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156 LR E A + D +G G+ NA + P Sbjct: 386 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCP 442 Query: 157 VQWMEEEGYFF--------RLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKD 206 V ++ + F RL + + L S + + +FI S+++ GLK Sbjct: 443 V--VQSTQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFI--------TRSWLRDGLKP 492 Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV- 262 ++R WG +P + + YVW DA YL+ T Y D + ++W V Sbjct: 493 RCITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVD 547 Query: 263 ----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIE 315 + KD + FH++ +P L A N L + + ++ ++ K SKS G V + Sbjct: 548 LYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMA 607 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 + D R++L+ G+D + L + N++L N +GN ++R+ + K + G Sbjct: 608 QDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGG 667 Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435 +P T D+ +L+ + LQ + ++ I AL ++++ ++Y +PW+ Sbjct: 668 YVPE-MVLTPDDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWK 726 Query: 436 -LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +K + D RA TV + V + L+++LQ ++P ++ I Sbjct: 727 RIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767 >gi|294659971|ref|XP_002770677.1| DEHA2G20262p [Debaryomyces hansenii CBS767] gi|199434371|emb|CAR66009.1| DEHA2G20262p [Debaryomyces hansenii] Length = 755 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 122/524 (23%), Positives = 225/524 (42%), Gaps = 55/524 (10%) Query: 2 KEREK-LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 KE E+ + I++A+ Y N PH+G+ ++ AD+ AR+ + + LF GTDE+G Sbjct: 190 KENERNILITSALPYVNNVPHLGNIVGSVLSADIYARYAKNRNYNALFICGTDEYGTATE 249 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A +T K D+ + +D+ D DI +D F RTT + + + ++ K+ D G + Sbjct: 250 TKALEEKITPKQLCDKYHKIHKDVYDWFDIGFDYFGRTTTSQQTEIAQDIFMKLFDNGYL 309 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH----------NPVQWMEEEGYFFR 168 + Y A+ D V QY +A+ NP + + R Sbjct: 310 EEKTTEQLYCQEHNAFLADRFVEGTCPKCQYEDARGDQCDKCGSLLNPFELVNP-----R 364 Query: 169 LSAYQDKLLSYYESH---------PEFILPIERRNE-----------VISFVKSGLKDLS 208 K + +H PE +E +E S++K GL+ Sbjct: 365 CKVDNAKPIPRNSTHIYIKLDDLEPELKAWVEEASEKGAWSKNSKTITNSWLKQGLEPRC 424 Query: 209 LSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTG--YLDNPDGSKAKFW--PADL-- 260 ++R WG +P + ++YVW DA Y++ T + DN K+W P ++ Sbjct: 425 ITRDLI-WGTPVPLEKFKDKVLYVWFDATIGYVSITANYFKDNKTEDWKKWWRNPENVDL 483 Query: 261 -HVIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEV 316 +GKD + FH + +PA + N + + ++ ++ K SKS G V Sbjct: 484 YQFMGKDNVPFHTVVFPASQIGTKDNWTKLHHLNTTEYLQYENGKFSKSRGVGVFGNNAK 543 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 + RY+L D + + N++L +GN V+R V ++ Y+G+ Sbjct: 544 ETNISPSVWRYYLASVRPESSDSHFSWTEFVTKNNSELLANLGNFVNRLVKFVIAKYNGV 603 Query: 377 IPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 +P P + ++ + +++L ENM+ + R L +S+ S +++ K Sbjct: 604 VPEFDPKNIPDYNKFNTEI-NQLLANYIENMEAVNLRRGLEIAMSISSRGNQFLQDNKLD 662 Query: 435 ELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 TN PD++ V+ V + +I ++ ++ F+P+ +I +L Sbjct: 663 NNLYTNLPDKSDAVMGVGLNLIYLVSAIISPFMPECTTQICQVL 706 >gi|284799512|ref|ZP_06390190.1| methionine--tRNA ligase [Neisseria subflava NJ9703] gi|284798091|gb|EFC53438.1| methionine--tRNA ligase [Neisseria subflava NJ9703] Length = 463 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 83/280 (29%), Positives = 138/280 (49%), Gaps = 15/280 (5%) Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD 259 ++ L D +SR +G +IPD P YVW+DA Y+ + L + G +++ AD Sbjct: 10 ETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAD 69 Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 H IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I Sbjct: 70 SQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAK 129 Query: 315 EVIEE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 +E+ + + +RY++ ++ +D + RVN+DL N+ +R+ I K Sbjct: 130 SYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKR 189 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 ++G + +D ++L+ + + I E +++ +AL +++L V+ Y DA K Sbjct: 190 FEGRLKDV-----ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANK 244 Query: 433 PWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLA 470 PWEL K R V + L L +PK+A Sbjct: 245 PWELAKQEGQDARLHEVCSELINAFTMLTAYLAPVLPKVA 284 >gi|195426788|ref|XP_002061477.1| GK20695 [Drosophila willistoni] gi|194157562|gb|EDW72463.1| GK20695 [Drosophila willistoni] Length = 1016 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 117/521 (22%), Positives = 223/521 (42%), Gaps = 63/521 (12%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD+ AR+ R G + L GTDE+G A Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIFARYSRSAGYNTLLICGTDEYGTATENKALAE 315 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 +T + D+ + I +D F RTT + + + +K + G I Sbjct: 316 NLTPREICDKYFELHNAIYRWFGIGFDYFGRTTHQEQTEIVQEAFKDVHSAGYIITESVE 375 Query: 126 GWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME-------------- 161 + + + D V Y+ A G + V E Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELIRPRCKVCNSAPV 435 Query: 162 ---EEGYFFRLSAYQDKLLSYYE------SHPEFILPIERRNEVISFVKSGLKDLSLSRK 212 + F L + KL + + +H ++ ++++ GLK ++R Sbjct: 436 LRSSDQLFIDLPKAEPKLREWVDKADNGWTHNARVI-------TRAWLREGLKPRCITRD 488 Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD------LHVI 263 WGI +P + + YVW DA Y++ T ++W PA + Sbjct: 489 -LKWGIPVPHAGFEKKVFYVWFDAPFGYVSMTKRYTK---DYQQWWQPAKGTDVELFQFM 544 Query: 264 GKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321 KD + FH++ WP+ LL+ N L + + ++ ++ K SKS G + + +E G Sbjct: 545 AKDNVPFHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDA-QETG 603 Query: 322 V--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 + D R++L G+D + + L R N++L N +GN V+R++ K+++ ++P Sbjct: 604 IPADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFNSLVPE 663 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK- 438 T+ + +L++ +R L+ +++ + + ++++ + Y Q+PW L K Sbjct: 664 V-VLTQDELILLALINRELRGYINSLEKAKLRDGIRHLLAISRHGNGYMQTQQPWVLLKG 722 Query: 439 --TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 T RA+T++ ++ + LA LL ++P A +FD L Sbjct: 723 DETQKKRAATIIGLSANIACLLANLLFPYMPSTARTLFDQL 763 >gi|67521846|ref|XP_658984.1| hypothetical protein AN1380.2 [Aspergillus nidulans FGSC A4] gi|40746054|gb|EAA65210.1| hypothetical protein AN1380.2 [Aspergillus nidulans FGSC A4] gi|259488283|tpe|CBF87610.1| TPA: methionyl-tRNA synthetase (AFU_orthologue; AFUA_1G09010) [Aspergillus nidulans FGSC A4] Length = 658 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 120/514 (23%), Positives = 223/514 (43%), Gaps = 43/514 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + +++A+ Y N PH+G+ ++ ADV AR+H+ G L+ GTDE+G Sbjct: 11 KGERNILVTSALPYVNNVPHLGNIVGSVLSADVFARYHKACGHPTLYICGTDEYGTATET 70 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A VT + + ++ +++ + +I +D F RT ++H + + ++K++ D G + Sbjct: 71 KALEEKVTPEELCAKYNKIHQEVYEWFEIGFDHFGRTPTQKHTEISQAIFKRLYDNGYLA 130 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEEE 163 + Y ++ D V Y A G Q H NP ++ Sbjct: 131 EKTAEQPYCETHGSFLADRYVEGECPRCHYDDARGDQCDKCGHLLDPFDLINPRCKLDGA 190 Query: 164 GYFFRLSAYQDKLLSYYESHPE-FILPI--------ERRNEVISFVKSGLKDLSLSRKTF 214 R + + LL + E ++LP RN ++++ GLKD ++R Sbjct: 191 TPVKRDTKHIHLLLDKLQPEIEKYVLPAMEKGEWPKNSRNITENWLREGLKDRGITRD-L 249 Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKDILR 269 WG+ +P D ++YVW +A Y + T PD P D+ + +GKD + Sbjct: 250 KWGVPVPLDGFDNKVLYVWFEACIGYPSITANY-TPDWELWWRNPEDVQLYQFLGKDNVP 308 Query: 270 FHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 FH++ +P L + + + ++ ++G K SKS G + E V D R Sbjct: 309 FHSVIFPGCQLGTKEKWTMLHHLNTAEYLNYEGGKFSKSRGIGVFGNNAKETGVAPDVWR 368 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-- 384 Y+L++ D ++ N++L +GNLV+R V ++ Y IP FT Sbjct: 369 YYLLKNRPETGDTQFEWRSFVDSNNSELLAKLGNLVNRVVKLVAASYGSTIPD---FTVP 425 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDR 443 ES + L + +L++ E M+ + ++ + + + A + L P+R Sbjct: 426 ESFQPTLDEVTGLLRQYVEEMEGVHLRAGVSTAMKIAEAGNGLIQANRLDNSLIANEPER 485 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A+ V+ + +I LA + ++P + I + L Sbjct: 486 AAAVVGTVLNLIHLLASVFAPYLPATSKSINEQL 519 >gi|194375956|dbj|BAG57322.1| unnamed protein product [Homo sapiens] Length = 635 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 127/525 (24%), Positives = 234/525 (44%), Gaps = 74/525 (14%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ER L I++A+ Y + PH+G+ ++ ADV AR+ RL + L+ GTDE+G Sbjct: 29 ERNVL-ITSALPYVSNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETK 87 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 88 ALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQ 147 Query: 122 GCYSGWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA----------- 152 LR E A + D +G G+ NA Sbjct: 148 DTVE---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVC 204 Query: 153 QHNPVQWMEEEGYFF--------RLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKS 202 + PV ++ + F RL + + L S + + +FI S+++ Sbjct: 205 RSCPV--VQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFI--------TRSWLRD 254 Query: 203 GLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWP-- 257 GLK ++R WG +P + + YVW DA YL+ T Y D + ++W Sbjct: 255 GLKPRCITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNP 309 Query: 258 --ADLH-VIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVI 311 DL+ + KD + FH++ +P L A N L + + ++ ++ K SKS G V Sbjct: 310 EQVDLYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVF 369 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 + + D R++L+ G+D + L + N++L N +GN ++R+ + K Sbjct: 370 GDMAQDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSK 429 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 + G +P T D+ +L+ + LQ + ++ I AL ++++ ++Y Sbjct: 430 FFGGYVPE-MVLTPDDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVN 488 Query: 432 KPWE-LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +PW+ +K + D RA TV + V + L+++LQ ++P ++ I Sbjct: 489 EPWKRIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 533 >gi|269214174|ref|ZP_06158403.1| methionine--tRNA ligase [Neisseria cinerea ATCC 14685] gi|269144326|gb|EEZ70744.1| methionine--tRNA ligase [Neisseria cinerea ATCC 14685] Length = 463 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 83/280 (29%), Positives = 137/280 (48%), Gaps = 15/280 (5%) Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD 259 ++ L D +SR +G +IPD P YVW+DA Y+ + L + G +++ AD Sbjct: 10 ETTLSDWDISRDAPYFGFEIPDAPSKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAD 69 Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314 H IGKDIL FHA++WPA L + P V++HGF+ G+K+SKS G I Sbjct: 70 SQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAK 129 Query: 315 EVIEE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 +E+ + + +RY++ ++ +D + RVN+DL N+ +R+ I K Sbjct: 130 SYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKR 189 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 ++G + +D +L+ + + I E +++ +AL +++L V+ Y DA K Sbjct: 190 FEGRLKDV-----ADSELLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANK 244 Query: 433 PWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLA 470 PWEL K R V + L L +PK+A Sbjct: 245 PWELAKQEGQDARLHEVCSELINAFTMLTAYLAPVLPKVA 284 >gi|297242583|ref|ZP_06926522.1| methionyl-tRNA synthetase [Gardnerella vaginalis AMD] gi|296889392|gb|EFH28125.1| methionyl-tRNA synthetase [Gardnerella vaginalis AMD] Length = 520 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 93/348 (26%), Positives = 166/348 (47%), Gaps = 40/348 (11%) Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF---VKSGLKDLSLSRKTFDWG 217 E E YF L A + +++ S + R VI+F + + +K +++R DWG Sbjct: 81 ETEHYFLDLPALAEANVNWLHSREGW------RTNVINFSLGLFNEVKPRAITRD-IDWG 133 Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGK 265 I +P D+P +YVW DA+ YL+ + G + W D + +GK Sbjct: 134 IPVPVEGWIDNPNKRLYVWFDAVIGYLSASIEWARRQGKPDAWRDWWCDPKSPGYYFMGK 193 Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311 D + FH+ WP+ +L+ N L +P++V + F+ +G+K S S G VI Sbjct: 194 DNITFHSQIWPSEMLAYNGAGSKGGEAGVYGPLNMPEQVVASEFMTMEGKKFSSSRGIVI 253 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 +++ VDA+RY++ D + + N +LA GNLV+R ++I K Sbjct: 254 YVKDILARYPVDAVRYYISIAGPENSDADFTWAEFARHNNEELAASWGNLVNRVANLINK 313 Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 ++ G+IP + T D ++L S + ++ AL + + +V+++++Y Sbjct: 314 NF-GVIPPLDEDSMTAMDRALLDQTSDAFALVGSLIERHRQKNALTEAMRVVADINKYIS 372 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A +PW++K + R TVL+V + + LL F+P A K+++ L Sbjct: 373 ATEPWKIKD-DEARLGTVLHVAAQAVSDANHLLAPFLPHAAQKVWEAL 419 >gi|320187431|gb|EFW62121.1| Methionyl-tRNA synthetase [Shigella flexneri CDC 796-83] Length = 326 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 82/314 (26%), Positives = 142/314 (45%), Gaps = 38/314 (12%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270 +IP+ P YVW+DA Y+ + L + G F W D H IGKDI+ F Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301 Query: 271 HAIYWPAFLLSANL 284 H+++WPA L +N Sbjct: 302 HSLFWPAMLEGSNF 315 >gi|149198175|ref|ZP_01875222.1| methionyl-tRNA synthetase [Lentisphaera araneosa HTCC2155] gi|149138777|gb|EDM27183.1| methionyl-tRNA synthetase [Lentisphaera araneosa HTCC2155] Length = 712 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 122/518 (23%), Positives = 235/518 (45%), Gaps = 48/518 (9%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +K I++A+ Y N +PH+G+ ++ AD ARF R + L+ GTDE+G A Sbjct: 3 KKRLITSALPYVNNEPHLGNLIGCVLSADCFARFSRSCDYETLYICGTDEYGTATETKAA 62 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G++ + D+ + + D +I +D F RT+ H T + ++++++ K D +K Sbjct: 63 QEGLSPREICDKYHVIHKKIYDHFNICFDAFGRTSTDIHTQTVQEIFEQVA-KEDHFKVV 121 Query: 124 YS-GWYSLRDEAYYNDDEV--------YKGADGQYYN---AQHNPVQWMEEEGYFFRLSA 171 + +YS + D + Y A G + A P + ++ + + + Sbjct: 122 ENEQFYSESMNKFLADRLINGTCPKCGYDDARGDQCDGCGALLTPTELIDPKCSVDKSTP 181 Query: 172 YQDKLLSYYESHPEFILPIER-RNEVI--------------SFVKSGLKDLSLSRKTFDW 216 K + PE +E +N I S++K GL+ +++R W Sbjct: 182 VLRKTKHLHLKLPELSSDLEAWQNHSIEAGHWPNNADTTTRSWMKRGLESRAITRD-LKW 240 Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD------LHVIGKDI 267 G+ +P + + YVW DA Y++ T G PD K+W D + KD Sbjct: 241 GVPVPYEGFTDKVFYVWFDAPIGYVSITRGAF--PD--TWKYWWHDPDNTQLFQFMAKDN 296 Query: 268 LRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324 + FH++ +PA +++ + + S ++ ++ K SKS + +VIE + VD Sbjct: 297 IPFHSVIFPATQIASGDKWTMCHHLASTEYLNYEDTKFSKSRNIGVFGSDVIESGIDVDL 356 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 R++L+ +D + +VN + + IGNLV+RS+ K++ G I A T Sbjct: 357 WRFYLLAIRPEKQDSAFTWQEFFDKVNNEFLDNIGNLVNRSLVYANKNFSGPIELCEA-T 415 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKTNPDR 443 E+ + +++EI + + A+ + L +++F ++PW ++K+ + Sbjct: 416 ETQTEFKNKAQELIKEITQAYEACSFREAIRLTLILGKLGNKFFQDEEPWVKIKEGKDEE 475 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 + + + V ++R ++ILL +P ANKI + + D Sbjct: 476 VRSAINILVHLVRDISILLSPAMPNTANKIQSFIGLKD 513 >gi|263514338|sp|C4V943|SYMC_NOSCE RecName: Full=Probable methionyl-tRNA synthetase, cytoplasmic; AltName: Full=Methionine--tRNA ligase; Short=MetRS Length = 560 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 126/528 (23%), Positives = 225/528 (42%), Gaps = 58/528 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K I++A+ Y N QPH+G+ ++ AD+ ARF R + DV+F +GTDE+G I AA Sbjct: 8 KKIITSALPYVNNQPHLGNIIGCVLSADMYARFCRKNNEDVVFLSGTDEYGTAIEMAAFA 67 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 T ++N + + D +I +D F TT H + + KI + G + Sbjct: 68 QNKTPLQICEENRIIHKKIYDWFNIDFDFFGHTTSTAHTKNVQDFFNKIHNNGFFTEQEI 127 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQ-----------------HNPVQW 159 ++ + + + D V Y A G + H+ Sbjct: 128 EQFFCDKCQIFLADRYVVGTCKFCKYTDAKGDQCDGCGHTYKSLDLIDAKCTLCHSFPNI 187 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-WGI 218 FF + ++DKL + ++ ++ + S++ L ++R + WG+ Sbjct: 188 KSTRHLFFDFNNFKDKLQKLFNTNSQY-WSENGKQITKSWLDQELLPRCMTRDLKNRWGV 246 Query: 219 KIP--DDPQYIMYVWIDALTNYLT-----TTGYLDNPDGSKAKFWPAD--------LHVI 263 +P D + + YVW DA+ Y T ++ + K + D + + Sbjct: 247 PVPLKDFEEKVFYVWFDAVIGYFTFYKEYVAARSESKELDKNNVFATDNILQDCELVQFM 306 Query: 264 GKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-V 320 GKD + FH I +P+ + + N PL KK+ F+L + EK SKS G+ I +++++ + Sbjct: 307 GKDNVFFHTIVFPSLIFATNDSYPLIKKLSVTEFLLFENEKFSKSRGHGIFGLDLVDNTM 366 Query: 321 GVDAL-RYFL--VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 G L RY+L +R C D + ++ADL N IGN +R + I D +I Sbjct: 367 GQSCLWRYYLAKIRPEKC--DSNFSFTHFTNVIDADLNNNIGNFCNRVLKYIKNKNDKLI 424 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 + D+ ++ ++ +E + I AL +++ + + Y Q+ K Sbjct: 425 -SIDKLEHRDDLMVQTIDKIYKEYLTSFSAIRIREALEKILEISKVGNEY--VQQVVSSK 481 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 P + V + V +I Q LL+ F+P + K+ + EN C Sbjct: 482 IEVP-KGFQVAFSIVVLIGQ---LLEPFIPVSSEKLLKMCNRKKENFC 525 >gi|307173500|gb|EFN64410.1| Methionyl-tRNA synthetase, cytoplasmic [Camponotus floridanus] Length = 934 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 123/522 (23%), Positives = 231/522 (44%), Gaps = 45/522 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + +++A+ Y N PH+G+ ++ AD+ AR+ R + L+ +GTDE+G Sbjct: 223 KGERNILVTSALPYVNNVPHLGNIIGCVLSADIFARYCRQRNYNTLYISGTDEYGTATEA 282 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A T +V D+ D+ I +D F RTT + + + +I +G + Sbjct: 283 KALQEKTTPQVICDKFFDIHNDVYRWFGIGFDYFGRTTTPEQTEIVQAFFLRIKSQGYVS 342 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWMEEEGYFFRL 169 + + + D V Y+ A G Q H N V+ + Sbjct: 343 SETVEQLHCESCDRFLADRFVEGTCPRCKYEDARGDQCDGCSHLVNAVELINPRCKMCNT 402 Query: 170 SAYQDKLLSYYESHP-------EFILPIER------RNEVISFVKSGLKDLSLSRKTFDW 216 + ++ P E+ + +E+ R S+++ GLK ++R W Sbjct: 403 RPVIKNSIQFFLDLPKIEKRLKEYSITVEKEWSSVARAVSKSWLRDGLKPRCITRD-LKW 461 Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DL-HVIGKDI 267 GI +P + + YVW DA Y++ T K+W DL + KD Sbjct: 462 GIPVPIEGFENKVFYVWFDAPFGYISITKRYTK---EYKKWWQPLQDTKIDLCQFMAKDN 518 Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324 + FHAI +PA+LL+A N L K + + ++ ++ +K SKS G + + + + D Sbjct: 519 VPFHAIMFPAYLLAANQNYTLIKYLMATEYLNYEDKKFSKSRGIGVFGTDARDTGIPADV 578 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 R++L +D ++ L + N++L N +GN V+R++ K ++ +P P Sbjct: 579 WRFYLAYIRPETQDSNFNWVDLATKNNSELLNNLGNFVNRALVFSEKFFNSTVP-PIEAE 637 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKT--NP 441 E+D ++L++ R L M+ + L ++++ ++Y Q+PW ++K T N Sbjct: 638 EADWTVLALAQRELSCYINAMEQAKLRDGLKYILAISKHGNQYMQFQQPWVKVKGTDDNK 697 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 RA TV+ + + L+ LL F+P A ++ L +++++ Sbjct: 698 KRAGTVIAICCNLACLLSALLAPFMPSTAKQLRSQLGLSNKS 739 >gi|260803681|ref|XP_002596718.1| hypothetical protein BRAFLDRAFT_78382 [Branchiostoma floridae] gi|229281977|gb|EEN52730.1| hypothetical protein BRAFLDRAFT_78382 [Branchiostoma floridae] Length = 579 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 131/553 (23%), Positives = 230/553 (41%), Gaps = 82/553 (14%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + + I++A+ Y N PH+G+ ++ ADV +R+ RL G + L+ GTDE+G A Sbjct: 32 KNVLITSALPYVNNVPHLGNIIGCVLSADVFSRYCRLRGWNALYICGTDEYGTATETRAL 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+T + D+ D+ +I +D F RTT + + + ++ ++ + + Sbjct: 92 EEGLTPQQICDKYHALHADIYRWFNIDFDFFGRTTTPQQTEIAQDIFWRLHQRDHLLTDT 151 Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYN------------------AQHNPV 157 + + + D V Y+ A G + +PV Sbjct: 152 VDQLLCEKCDRFLADRFVEGTCPLCNYEDARGDQCDKCGKLIVATELKKPRCKVCSASPV 211 Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER-----RNEVISFVKSGLKDLSLSRK 212 F L + KL + E ILP + R ++++ GLK ++R Sbjct: 212 V-KTSTHLFLNLPQIEPKLSGWLEE----ILPSDSWSSNARVITRTWLRDGLKPRCITRD 266 Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADL---HVIGK 265 WG +P + + YVW DA YL+ T N K+W P ++ + + K Sbjct: 267 -LQWGTPVPLKGFTEKVFYVWFDAPIGYLSITA---NYTDQWEKWWKNPDEVTLYNFMAK 322 Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322 D + FH++ +P LL A N L + + F+ ++ K SKS G V + Sbjct: 323 DNVPFHSVVFPCSLLGAEDNYTLVNHLQATEFLNYEDGKFSKSRGIGVFGDDAKDTSIPA 382 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R++L+ +D + + L + N++L N +GN + ++ + D D Sbjct: 383 DIWRFYLLYVRPENQDTTFSWEDLMVKHNSELLNNLGNFIYSTIPTM--DLD-------- 432 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 ESD +L+ +R LQ NM+ + L ++++ ++Y A KPW L K Sbjct: 433 --ESDTEMLAQVNRELQMYNFNMERVRLREGLTTILNISRLGNQYIQASKPWVLLKGTEQ 490 Query: 443 ---RASTVLYVTVEVIRQLAILLQAFVPKLANKI-------FDILFVADENRCFQSLDQR 492 RA TV+ + + L++LL ++P ++ +I D+ V D C Sbjct: 491 ERARAGTVVGLCANIACVLSVLLHPYMPDISTQIQAQLAAPVDVNVVGDRLVC------H 544 Query: 493 LKPGFMLHKTFDP 505 L PG HK P Sbjct: 545 LAPG---HKIGQP 554 >gi|68006554|ref|XP_670411.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56485641|emb|CAI03621.1| hypothetical protein PB301256.00.0 [Plasmodium berghei] Length = 233 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/125 (45%), Positives = 74/125 (59%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + YI+TAI Y N +PHIGHAYE+++AD LAR+HR G DV FTTG DEHG KIA A Sbjct: 109 KNDNFYITTAINYVNGEPHIGHAYEIVLADTLARYHRNLGRDVFFTTGADEHGLKIANQA 168 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 +T + D N F+ + L + D ++RTT H + +W K GDIY G Sbjct: 169 LRNNMTPQELCDLNVIKFKKLNKDLHTTEDYYVRTTADIHKKIAQSIWMKCVKNGDIYLG 228 Query: 123 CYSGW 127 Y GW Sbjct: 229 EYEGW 233 >gi|167519384|ref|XP_001744032.1| hypothetical protein [Monosiga brevicollis MX1] gi|163777994|gb|EDQ91610.1| predicted protein [Monosiga brevicollis MX1] Length = 616 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 122/516 (23%), Positives = 237/516 (45%), Gaps = 58/516 (11%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + +++A+ Y N PH+G+ ++ ADV ARF R G VLF GTDE+G A Sbjct: 21 ILVTSALPYVNNVPHLGNIIGCVLSADVYARFARNQGHTVLFVCGTDEYGTATETKALAE 80 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ + + + +IS+D F RT+ + C+ ++KK G + + Sbjct: 81 GMTPREICDKYHAIHKGVYEWFNISFDHFGRTSTPLQTEICQDIFKKCYANGFVQQKDEQ 140 Query: 126 GWYSLRDEAYYND--------DEVYKGADG--------------------QYYNAQHNPV 157 WY E + D D Y A G +Y + Sbjct: 141 QWYCTSCETFLADRFVEGICPDCGYDDARGDQCDECGHTFDAIKLKSPRCRYRKDCNKAP 200 Query: 158 QWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + + +L Q +Y ES+ + ++ ++ GL+ +++R W Sbjct: 201 ELRTSRHLYLQLDKLQPLTEKWYAESNDKHAWSKIAQDISRNWFNMGLEARAITRD-LKW 259 Query: 217 GIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKDIL 268 GI +P + + + YVW DA Y++ T Y D + ++W P ++ + + KD + Sbjct: 260 GIPVPLEGFTEKVFYVWFDAPIGYISITANYTDQWE----QWWKNPENVELFQFMAKDNV 315 Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDAL 325 FH+I +P+ LL++ N + + + ++ ++G + SKS G V + D Sbjct: 316 PFHSIVFPSALLASQDNWTMLNHLNAVQYLNYEGTQFSKSRGVGVFGDSARDSGLAADVY 375 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 R++L+ D +D + L + N +L N +GN +R++S + +DG +P Sbjct: 376 RFYLLYMRPEASDANFDWEDLVAKHNNELLNNLGNFANRALSFCKRFFDGKVPK----IA 431 Query: 386 SDESILSVCSRVLQEIR---ENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441 D++ + ++V E+R E M++Q+ I A+ ++S+ ++Y + PW+L K NP Sbjct: 432 LDDTAVEAVAQVNTELRAYTEGMESQVRIRDAIRGILSVSRIGNQYLQSTMPWKLVK-NP 490 Query: 442 D---RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + +A +++ V + + +A++L+ +P A ++ Sbjct: 491 ETAAQAGSIVGVVLNLTYLIALMLEPIMPDTAQELL 526 >gi|332022780|gb|EGI63053.1| Methionyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior] Length = 977 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 124/526 (23%), Positives = 230/526 (43%), Gaps = 52/526 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + I++A+ Y N PH+G+ ++ AD+ AR+ R + L+ GTDE+G Sbjct: 260 KGERNMLITSALPYVNNVPHLGNIIGCVLSADIFARYCRQRNYNTLYICGTDEYGTATEA 319 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A +T + D+ D+ I +D F RT+ + + + KI +G + Sbjct: 320 KALQEKMTPQAICDKFFDIHNDIYRWFGIGFDYFGRTSTPEQTEIVQAFFLKIKSQGYVL 379 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME----------- 161 + + + D V Y+ A G + + V +E Sbjct: 380 TETVEQLHCEFCDRFLADRFVEGTCPGCKYEDARGDQCDGCGHLVNAVELINPRCKICNI 439 Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS--FVKSGLKDLSLSRKT 213 +F L ++KL Y + + + R V+S +++ GL+ ++R Sbjct: 440 KPVVKNSVQFFLDLPKLEEKLKEYSTTRDKGWSNVAR---VVSKAWLRDGLQPRCITRD- 495 Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLD-------NPDGSKAKFWPADLH-VI 263 WGI +P + + YVW DA Y++ T P K DL+ + Sbjct: 496 LKWGIPVPVEGFEHKVFYVWFDAPFGYISITKRYTKEYKQWWQPPSQDIKI---DLYQFM 552 Query: 264 GKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-V 320 KD + FH I +PA LL+AN L K + + ++ ++ +K SKS G + + + + Sbjct: 553 AKDNIPFHTIMFPACLLAANQNYTLMKCILATEYLNYEDKKFSKSRGIGVFGTDARDTGI 612 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D R++L +D ++ L + N++L N +GN V+R++ K +D IP P Sbjct: 613 PADVWRFYLAYIRPETQDSNFNWVDLATKNNSELLNNLGNFVNRALVFCEKFFDSNIP-P 671 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 E+D ++L++ R L M+ + L +++++ ++Y Q+PW K N Sbjct: 672 IEPEEADWTVLALVQRELSAYINAMEQGKLKDGLKRILAISKHGNQYMQFQQPWVKIKGN 731 Query: 441 PD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 D +A TV+ + + L+ LL F+P +A ++ L ++++N Sbjct: 732 DDNKKKAGTVVAICCNLACLLSALLAPFMPNIAKQLRSQLGLSNKN 777 >gi|268536458|ref|XP_002633364.1| C. briggsae CBR-MRS-1 protein [Caenorhabditis briggsae] gi|187034452|emb|CAP26269.1| CBR-MARS-1 protein [Caenorhabditis briggsae AF16] Length = 921 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 113/515 (21%), Positives = 219/515 (42%), Gaps = 52/515 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I+ A+ Y N PH+G+ ++ ADV AR+ L G + GTDE+G A Sbjct: 34 KRNILITAALPYVNNVPHLGNIIGCVLSADVFARYCNLRGHQTFYVGGTDEYGTATETKA 93 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G T + D+ + + + I + F RTT + C+ ++ K+ G Sbjct: 94 LQEGCTPRELCDKYHAIHKGIYEWFGIDFTHFGRTTTDHQTEICQDMFLKLHKNGFTTTQ 153 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ--DKLLSYY 180 + + + + D V G N ++ + + +G ++A + D Sbjct: 154 TVDQLFCNQCDKFLADRFVT----GTCPNCAYDDARGDQCDGCGKLINAVELKDAKCHMC 209 Query: 181 ESHPE------FILPIERRNEVI------------------------SFVKSGLKDLSLS 210 +S PE L +++ E S+ GL+ ++ Sbjct: 210 KSTPEVKQSTHIFLSLDKLQESTMDLIMKQMDLPGSKWSANAKGITKSWENQGLEPRCIT 269 Query: 211 RKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGK 265 R WG +P + + + YVW DA YL+ T + D +K P+++ + +GK Sbjct: 270 RD-LKWGTPVPLEGFEKKVFYVWFDAPIGYLSITKCVLGDDWTKWWKNPSNVELYNFVGK 328 Query: 266 DILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV- 322 D + FH + +P + AN + + + ++ ++ K SKS G I + + G+ Sbjct: 329 DNVAFHGVMFPCSQVGANDNYTVVNHLCATEYLNYEDTKFSKSRGTGIFG-DAAQRTGIP 387 Query: 323 -DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 D R++L+ +D + D +VN++L N +GN ++R++S + + G+IP Sbjct: 388 ADIWRFYLLYMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVANFFGGVIPN-M 446 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN- 440 TE+D +IL + + + A+ ++++ ++Y +Q PW L K + Sbjct: 447 DLTEADATILEEIHQECLQWDTQFDGVRLKDAVKSILNVSRIGNQYMQSQTPWVLMKGDD 506 Query: 441 --PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 RA T++ V + LA++L +P ++ I Sbjct: 507 AAKKRAGTIIGVAANIAYHLAVILYPVMPSVSETI 541 >gi|242006743|ref|XP_002424206.1| methionine-tRNA synthetase, putative [Pediculus humanus corporis] gi|212507555|gb|EEB11468.1| methionine-tRNA synthetase, putative [Pediculus humanus corporis] Length = 891 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 110/477 (23%), Positives = 211/477 (44%), Gaps = 50/477 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ +++ DV ARF RL G + L+ +GTDE+G A Sbjct: 250 ILITSALPYVNNVPHLGNIIGCVLSGDVFARFCRLRGYNTLYISGTDEYGTATETKALEE 309 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ + + IS+D F RTT + + C++++KKI++ I Sbjct: 310 GLTPREICDKYYKIHDAIYKWFGISFDYFGRTTTPQQTEICQLIFKKINENNYIISDVVE 369 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYN------------------AQHNPVQW 159 + + Y D V Y+ A G + + PV Sbjct: 370 QLLCEKCDRYLADRFVEGVCPRCSYEDARGDQCDGCGHLINAPELIKPRCKMCKQTPV-- 427 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + + FF + LL + R +++ GLK ++R WGI Sbjct: 428 LRQSKQFFLDLPKIEPLLKEWIQQRWLDWSHNAREISKAWLNDGLKPRCITRD-LKWGIP 486 Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-------IGKDILR 269 +P + + YVW DA Y++ T GY K+W D + + KD + Sbjct: 487 VPLEGFESKVFYVWFDAPIGYISITKGYT----SEWKKWWMPDKNTKVNLYQFMAKDNVP 542 Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DAL 325 FH++ +PA L+++ N +F+ ++ ++ K SKS G + + +E G+ D Sbjct: 543 FHSVMFPASLIASKENYVTVSNIFATEYLNYEDGKFSKSRGIGVFGNDA-QETGIPADVW 601 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 R++L+ +D + L + N++L + +GN ++R++ K +D IP T+ Sbjct: 602 RFYLLYVRPESQDSSFSWSDLALKNNSELLSVLGNFINRALMFCEKTFDSKIPNMN-LTD 660 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 + ++++ +R L E ++ + + ++S+ +++ + +PW L K + D Sbjct: 661 ENYELVALVNRELHEYISVIEKGKLREGIRHLLSIARLGNQFMQSSQPWVLCKGSED 717 >gi|320325842|gb|EFW81903.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. B076] gi|320327240|gb|EFW83254.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] Length = 547 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 117/490 (23%), Positives = 213/490 (43%), Gaps = 46/490 (9%) Query: 25 AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84 A ++ AD+ ARF R G DV+F GTDEHG AAQNA + K + + R + Sbjct: 2 AGSLLPADIYARFLRQQGHDVMFICGTDEHGTPAEIAAQNANMDVKSYCNHMYEVQRRIY 61 Query: 85 DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV--- 141 +S++ F R++ ++ + + + K+ D G I++ S +YS + + D + Sbjct: 62 ANFGLSFNFFGRSSCDQNVEITQEFFFKLQDAGYIFEDVISQYYSAVEGRFLPDRFINGQ 121 Query: 142 -----YKGADGQYYN---AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193 + A G + A NP + + + + + S+ E +P+ ++ Sbjct: 122 CPRCGFLSATGDQCDGCGALLNPEELINPKSSISGDEKLELRRTSHLFLDLEKTVPLLQK 181 Query: 194 -----------NEVIS--FVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTN 237 +IS GLK ++R WGI +P P+ + YVW DA Sbjct: 182 WHDSNRWGNLTRGIISKWMDNEGLKARCITRDN-KWGIPVPLLHLTPK-VFYVWFDAPYA 239 Query: 238 YLTTT-GYLDNPDGSKA---KFWPAD----LHVIGKDILRFHAIYWPAFLLSA--NLPLP 287 Y+ T Y D ++ K+W +D + KD + FHAI+WPA LL++ N+ L Sbjct: 240 YIAITKAYGDTLGDAETILKKWWYSDSVEYTQFMAKDNVPFHAIFWPAQLLASRDNVKLV 299 Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 + ++ + G K S S + + +E D RY+L D + Sbjct: 300 DDIKGFNWLTYDGGKFSTSRLRGVFLDQALELFPADYWRYYLAARAPESSDSDFSFQDFA 359 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRE 403 + VN++L G+GN V R + +Y+ T +F DE+++ + + ++ Sbjct: 360 QVVNSELVGGLGNFVRRVFKLASNNYE---ETNVSFNTREVMLDEALVVEITELFSNLQS 416 Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463 M + + +++ ++ L S +RY +PW K++P +A V+ I ++ + Sbjct: 417 LMYKKEVRKSIEKIRLLWSIANRYIAEAQPWTTIKSDPHQALQVIKNCFYFIYLFSLSVA 476 Query: 464 AFVPKLANKI 473 +P A K+ Sbjct: 477 PVIPFTAEKL 486 >gi|119496181|ref|XP_001264864.1| methionyl-tRNA synthetase [Neosartorya fischeri NRRL 181] gi|119413026|gb|EAW22967.1| methionyl-tRNA synthetase [Neosartorya fischeri NRRL 181] Length = 651 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 121/519 (23%), Positives = 231/519 (44%), Gaps = 53/519 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + I++A+ Y N PH+G+ ++ ADV AR+H+ G L+ GTDE+G Sbjct: 11 KGERNILITSALPYVNNVPHLGNIVGSVLSADVFARYHKACGRQTLYICGTDEYGTATET 70 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A VT + + ++ +++ + +I +D F RT ++H + + ++K++ D G + Sbjct: 71 KALEEKVTPEELCAKYNKIHQEVYEWFEIGFDHFGRTPTQQHTEISQAIFKRLYDNGYLT 130 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEEE 163 + + ++ D V Y+ A G Q H P ++ Sbjct: 131 EKTAEQPFCEAHGSFLADRYVEGECPRCHYEDARGDQCDKCGHLLDPFDLIKPRCKLDGA 190 Query: 164 GYFFRLSAYQDKLLSYYESHPE-FILPI--------ERRNEVISFVKSGLKDLSLSRKTF 214 R + + LL + E ++LP R+ +++K GLKD ++R Sbjct: 191 TPVRRSTKHIHLLLDKLQPEIEKWVLPAMEKGNWPKNSRDITKAWLKEGLKDRGITRD-L 249 Query: 215 DWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKD 266 WG+ +P P + ++YVW +A Y + T N K+W P ++ + +GKD Sbjct: 250 KWGVPVPL-PGFENKVLYVWFEACIGYPSITA---NYTADWEKWWRNPEEVELYQFLGKD 305 Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVD 323 + FH++ +P L + + + ++ ++G K SKS G V V D Sbjct: 306 NVPFHSVIFPGCELGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGVGVFGNNARQTGVPPD 365 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TP 380 RY+L++ D ++ + N++L +GNLV+R V +I Y+ IP P Sbjct: 366 VWRYYLLKNRPETGDTQFEWRPFVECNNSELLAKLGNLVNRVVKLIAASYNSTIPEFIVP 425 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRA--LAQVISLVSEVDRYFDAQKPWELKK 438 +F + + I S+ + ++E+ ++ A LA+ + + + +R +A L Sbjct: 426 ESFQPNLDEITSLLRQYIEEMEGVHLRAGVNTAMRLAEAGNGLIQANRLDNA-----LIA 480 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 PDRA+ V+ + +I L+ + ++P + I + L Sbjct: 481 NEPDRAAAVVGTVINLIHLLSSVFAPYLPATSRSILEQL 519 >gi|70994984|ref|XP_752268.1| methionyl-tRNA synthetase [Aspergillus fumigatus Af293] gi|66849903|gb|EAL90230.1| methionyl-tRNA synthetase [Aspergillus fumigatus Af293] gi|159131024|gb|EDP56137.1| methionyl-tRNA synthetase [Aspergillus fumigatus A1163] Length = 651 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 121/519 (23%), Positives = 230/519 (44%), Gaps = 53/519 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + +++A+ Y N PH+G+ ++ ADV AR+H+ G L+ GTDE+G Sbjct: 11 KGERNILVTSALPYVNNVPHLGNIVGSVLSADVFARYHKACGRQTLYICGTDEYGTATET 70 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A VT + + ++ +++ + +I +D F RT ++H + + ++K++ D G + Sbjct: 71 KALEEKVTPEELCAKYNKIHQEVYEWFEIGFDHFGRTPTQQHTEISQAIFKRLYDNGYLT 130 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEEE 163 + + ++ D V Y+ A G Q H P ++ Sbjct: 131 EKTAEQPFCEAHGSFLADRYVEGECPRCHYEDARGDQCDKCGHLLDPFDLIKPRCKLDGA 190 Query: 164 GYFFRLSAYQDKLLSYYESHPE-FILPI--------ERRNEVISFVKSGLKDLSLSRKTF 214 R + + LL + E ++LP R+ +++K GLKD ++R Sbjct: 191 TPVRRSTKHIHLLLDKLQPEIENWVLPAMEKGNWPKNSRDITKAWLKEGLKDRGITRD-L 249 Query: 215 DWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKD 266 WG+ +P P + ++YVW +A Y + T N K+W P ++ + +GKD Sbjct: 250 KWGVPVPL-PGFENKVLYVWFEACIGYPSITA---NYTADWEKWWRNPEEVELYQFLGKD 305 Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVD 323 + FH++ +P L + + + ++ ++G K SKS G V V D Sbjct: 306 NVPFHSVIFPGCELGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGVGVFGNNARQTGVPPD 365 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TP 380 RY+L++ D ++ + N++L +GNLV+R V +I Y+ IP P Sbjct: 366 VWRYYLLKNRPETGDTQFEWRSFVECNNSELLAKLGNLVNRVVKLIAASYNSTIPEFTVP 425 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRA--LAQVISLVSEVDRYFDAQKPWELKK 438 +F + + I S+ + ++E+ I+ A LA+ + + +R +A L Sbjct: 426 ESFQPNLDEITSLLRQYIEEMEGVHLRPGINTAMRLAEAGNGFIQANRLDNA-----LIA 480 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 PDRA+ V+ + +I L+ + ++P + I + L Sbjct: 481 NEPDRAAAVVGTVINLIHLLSSVFAPYLPATSKSILEQL 519 >gi|21428760|gb|AAM50099.1| AT05114p [Drosophila melanogaster] Length = 1012 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 126/528 (23%), Positives = 231/528 (43%), Gaps = 77/528 (14%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD+ AR+ R G + L GTDE+G A Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTDEYGTATENKALAE 315 Query: 66 GVTTKVFVDQ-------------------NSRNFRDMADVLDISYDDFIRT----TEKRH 102 +T + D+ ++ D++ ++ D ++ TE Sbjct: 316 NLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITESVE 375 Query: 103 HDTC----RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH--NP 156 C R L + + + GC G+ R D+ K G+ NA P Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGC--GYEDARG------DQCDKC--GKLVNATELIRP 425 Query: 157 VQWMEEEGYFFRLSAYQDKL-LSYYESHPEFILPIERRN-------EVIS--FVKSGLKD 206 + R S D+L + ++ P+ +++ +VI+ ++K GLK Sbjct: 426 RCKVCNSAPVLRSS---DQLFIDLPKAEPQLKEWVDKSEGGWTHNAKVITRAWLKEGLKP 482 Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD---- 259 ++R WGI +P + + + YVW DA Y++ T ++W PA Sbjct: 483 RCITRD-LKWGIPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTK---EYQQWWQPAKGTDV 538 Query: 260 --LHVIGKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315 + KD + FH++ WP+ LL+ N L + + ++ ++ K SKS G + + Sbjct: 539 ELFQFMAKDNVPFHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGND 598 Query: 316 VIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +E G+ D R++L G+D + + L R N++L N +GN V+R++ K++ Sbjct: 599 A-QETGIPADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNF 657 Query: 374 DGMIPTPGAFTESDESI-LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 + PG T DE + L++ +R L+ +M+ + + ++++ + Y +Q+ Sbjct: 658 SSTV--PGVITTQDELVLLALINRELRGYINSMEKAKLRDGVRHLLAISRHGNGYMQSQQ 715 Query: 433 PWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 PW L K D RAST++ + V + LA LL ++P A +F L Sbjct: 716 PWVLLKGTDDQKTRASTIIGLCVNIACLLANLLFPYMPTTARTLFGQL 763 >gi|213022927|ref|ZP_03337374.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 298 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 117/226 (51%), Gaps = 12/226 (5%) Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + E +FF L ++ + L ++ S L + N++ + +SGL+ +SR +G +I Sbjct: 68 DSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGFEI 124 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRFHA 272 P+ P YVW+DA Y+ + L + G F W D H IGKDI+ FH+ Sbjct: 125 PNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFHS 184 Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++WPA L ++ P +F HG++ G K+SKS G I ++ D+LRY+ + Sbjct: 185 LFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTAK 244 Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 ++ D + + +RVNAD+ N + NL SR+ I K +DG++ Sbjct: 245 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL 290 >gi|24655311|ref|NP_611382.1| CG15100 [Drosophila melanogaster] gi|21627004|gb|AAF57625.2| CG15100 [Drosophila melanogaster] Length = 1022 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 126/528 (23%), Positives = 231/528 (43%), Gaps = 77/528 (14%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD+ AR+ R G + L GTDE+G A Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTDEYGTATENKALAE 315 Query: 66 GVTTKVFVDQ-------------------NSRNFRDMADVLDISYDDFIRT----TEKRH 102 +T + D+ ++ D++ ++ D ++ TE Sbjct: 316 NLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITESVE 375 Query: 103 HDTC----RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH--NP 156 C R L + + + GC G+ R D+ K G+ NA P Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGC--GYEDARG------DQCDKC--GKLVNATELIRP 425 Query: 157 VQWMEEEGYFFRLSAYQDKL-LSYYESHPEFILPIERRN-------EVIS--FVKSGLKD 206 + R S D+L + ++ P+ +++ +VI+ ++K GLK Sbjct: 426 RCKVCNSAPVLRSS---DQLFIDLPKAEPQLKEWVDKSEGGWTHNAKVITRAWLKEGLKP 482 Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD---- 259 ++R WGI +P + + + YVW DA Y++ T ++W PA Sbjct: 483 RCITRD-LKWGIPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTK---EYQQWWQPAKGTDV 538 Query: 260 --LHVIGKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315 + KD + FH++ WP+ LL+ N L + + ++ ++ K SKS G + + Sbjct: 539 ELFQFMAKDNVPFHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGND 598 Query: 316 VIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +E G+ D R++L G+D + + L R N++L N +GN V+R++ K++ Sbjct: 599 A-QETGIPADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNF 657 Query: 374 DGMIPTPGAFTESDESI-LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 + PG T DE + L++ +R L+ +M+ + + ++++ + Y +Q+ Sbjct: 658 SSTV--PGVITTQDELVLLALINRELRGYINSMEKAKLRDGVRHLLAISRHGNGYMQSQQ 715 Query: 433 PWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 PW L K D RAST++ + V + LA LL ++P A +F L Sbjct: 716 PWVLLKGTDDQKTRASTIIGLCVNIACLLANLLFPYMPTTARTLFGQL 763 >gi|320163393|gb|EFW40292.1| methionyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864] Length = 1036 Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 131/531 (24%), Positives = 234/531 (44%), Gaps = 60/531 (11%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++ + I++A+ Y N PH+G+ ++ ADV ARF R G + L+ GTDE+G Sbjct: 304 DQRNILITSALPYVNNVPHLGNIIGCVLSADVYARFCRERGYNTLYICGTDEYGTATETK 363 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-TTEKRHHDTCRILWKKISDKGDIY 120 A G+T + D+ + R++ + IS+D F R TT ++ + I + + + + Sbjct: 364 ALEEGLTPQQICDKYHKLHREIYEYFQISFDHFGRTTTPQQTEISQDIFLRALKNDTLLE 423 Query: 121 KG-----CYSGWYSLRD--------EAYYND---DEVYKGADGQYYNA-----------Q 153 + C + L D Y+D D+ K G+ NA + Sbjct: 424 ESVEQLLCETCNRYLADRFVEGICPSCKYDDARGDQCDKC--GKLLNAVELVEPRCKLCR 481 Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRK 212 PV F L ++ +Y S + ++ S++K G+K ++R Sbjct: 482 SRPVV-RPSRHMFLNLPMLDGQIKEWYAGSSVKGDWTASAKHITSSWLKEGVKPRCITRD 540 Query: 213 TFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGK 265 WG+ +P D + + YVW DA Y++ T K+W P+ + + + K Sbjct: 541 -LKWGVPVPLDGFREKVFYVWFDAPIGYISITAAYT---AEWEKWWKNPSQVQLYQFMAK 596 Query: 266 DILRFHAIYWPAFL------LSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEV 316 D + FH+I +PA + L+A N L + + F+ ++ K SKS G V Sbjct: 597 DNVPFHSIIFPASIIFPASQLAAKDNYTLVHHISAVEFLNYEDGKFSKSRGVGVFGNHAR 656 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 + +D R++L+ D + L +VN +L +GNLV RS+S I ++ G Sbjct: 657 DTGLAIDIFRFYLLGIRPEYTDSVFSWTDLASKVNNELLANLGNLVQRSLSFIKANFAGK 716 Query: 377 IPTPGAFTESDE---SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 +P ++D + +++ +R L+E + ++ + AL V+ + S ++YF +P Sbjct: 717 VPKVVLNVDTDAQSCNFVALVNRYLREYIDLLEQVHLRDALRLVLKISSIANQYFQTVQP 776 Query: 434 WELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 W+ K D R +T L + + L+ LL F+P KI + L A Sbjct: 777 WKTIKLTDDLSKQRTATCLGLCANFVHLLSTLLFPFMPVTGKKILEQLNAA 827 >gi|145239045|ref|XP_001392169.1| methionyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS 513.88] gi|134076672|emb|CAK45203.1| unnamed protein product [Aspergillus niger] Length = 659 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 121/520 (23%), Positives = 225/520 (43%), Gaps = 51/520 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + + +++A+ Y N PH+G+ ++ ADV ARFH+ G L+ GTDE+G Sbjct: 11 KGQRNILVTSALPYVNNVPHLGNIVGSVLSADVFARFHKACGHQTLYICGTDEYGTATET 70 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A VT + + ++ + + + +I +D F RT ++H + + ++KK+ + G + Sbjct: 71 KALEEKVTPEELCAKYNKIHQQVYEWFEIGFDHFGRTPTQQHTEISQAIFKKLYENGYLT 130 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEEE 163 + + ++ D V Y A G Q H NP ++ Sbjct: 131 EKTAEQPFCETHGSFLADRYVEGECPRCHYDDARGDQCDKCGHLLDPFDLINPRCKLDGA 190 Query: 164 GYFFRLSAY----QDKLLSYYESHPEFIL-----PIERRNEVISFVKSGLKDLSLSRKTF 214 R + + DKL E + + P R S++K GLKD ++R Sbjct: 191 TPVRRSTKHIHLLLDKLQPQIEEWSKNAIEKGDWPKNSRVITESWLKEGLKDRGITRD-L 249 Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IGKD 266 WG+ +P + ++YVW +A Y + T S + W P D+ + +GKD Sbjct: 250 KWGVPVPLEGFETKVLYVWFEACIGYPSITANYT----SDWELWWRNPEDVQLYQFLGKD 305 Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV-- 322 + FH++ +P L + + + ++ ++G K SKS G + +E GV Sbjct: 306 NVPFHSVIFPGSQLGTKEKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGTSA-KETGVPP 364 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D RY+L++ D ++ + N++L +GNLV+R + ++ Y ++P Sbjct: 365 DVWRYYLLKNRPETGDTQFEWRSFVESNNSELLAKLGNLVNRVIKLVTASYGSVVP---E 421 Query: 383 FT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKT 439 FT ES + L + L++ E M+ + + + L + A + L Sbjct: 422 FTVPESFQPTLDEVTATLRQYIEEMEGAHLRAGVVSAMKLAEAGNGLIQANRLDNSLIAN 481 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 P+RA+ V+ + +I LA + ++P + I + L V Sbjct: 482 EPERAAAVVGTVLNLIHLLASVFSPYLPATSKSINEQLDV 521 >gi|171686138|ref|XP_001908010.1| hypothetical protein [Podospora anserina S mat+] gi|170943030|emb|CAP68683.1| unnamed protein product [Podospora anserina S mat+] Length = 684 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 132/577 (22%), Positives = 233/577 (40%), Gaps = 86/577 (14%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +E + I++A+ Y N PH+G+ ++ ADV ARF R GL ++ G+DE+G A Sbjct: 14 KENILITSALPYVNNVPHLGNIIGSVLSADVFARFCRARGLPTIYICGSDEYGTATETKA 73 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + GV + +++ D I +D F RT H + + ++K + + G I + Sbjct: 74 LSEGVDPATLCAKYHAIHKEIYDWFRIDFDTFGRTPTDEHTEIVQSVFKHLWNNGYIEQR 133 Query: 123 CYSGWYSLRDEAYYNDDEVY--------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 + Y E++ D V KGA G +A N + ME + S Q+ Sbjct: 134 ETTQAYCPEHESFLADRYVEGECSLCHDKGARGDQCDACGNLLDPMEPD---LDASGNQE 190 Query: 175 KLLSYYESHPEFIL----PIER------------RNEVISFVKSGLKDLSLS-------- 210 + + +P+ L PI+R + E+ +++ S KD S + Sbjct: 191 TKATGWLINPKCKLDGTTPIKRQTKHLYLRLDALQGEIETWIASAKKDWSANCTSITYSW 250 Query: 211 ----------RKTFDWGIKIP---------DDPQYIMYVWIDALTNYLTTTGYL---DNP 248 + WG+ IP D + + YVW DA Y + T NP Sbjct: 251 LDQGLKPRGITRDLKWGVPIPTGLDGLSEEDFAKKVFYVWFDACIGYPSITKTFTDAGNP 310 Query: 249 DGSKAKFW---PADLHV---IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKG 300 G+ + W P ++ + +GKD + FH I WPA + + N K + + ++ ++G Sbjct: 311 SGTNWEKWWKNPEEVSLYQFMGKDNVPFHTIIWPASQIGSKENWTKVKTLSTTEYLNYEG 370 Query: 301 EKISKSLG-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K SKS G V + D R++L+ D + + N DL +G Sbjct: 371 GKFSKSKGVGVFGNNARDTGIDPDIWRFYLLSRRPETSDSEFKWEEFVDVNNNDLLKNLG 430 Query: 360 NLVSRSVSMILKDYDGMIPT------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 NL R + ++P P DE +++L E ++ + Sbjct: 431 NLCQRVIKFTQAKMGSVVPDFDLSKFPALQQHKDE-----VNKLLHEYNTTLRGLKLRHG 485 Query: 414 LAQVISLVSEVDRYF-DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 L+ ++++ ++ D + +L P+R + V+ + + I LA +L ++P + Sbjct: 486 LSVIMAISGLGNKLLQDNKLGNQLIAEEPERCNAVIGIALNHIHLLANVLAPYMPGKSQA 545 Query: 473 IFDILFVADENRCFQSLD----QRLKPGFMLHKTFDP 505 I L E + LD +KPG HK +P Sbjct: 546 ILKQLGFDGEGQTASILDVWEADAIKPG---HKLGEP 579 >gi|296828372|ref|XP_002851320.1| methionyl-tRNA synthetase [Arthroderma otae CBS 113480] gi|238838874|gb|EEQ28536.1| methionyl-tRNA synthetase [Arthroderma otae CBS 113480] Length = 650 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 121/515 (23%), Positives = 223/515 (43%), Gaps = 47/515 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV AR+++ G L+ GTDE+G A Sbjct: 13 QRNILITSALPYVNNVPHLGNIVGSVLSADVFARYNKACGRPTLYVCGTDEYGTATETKA 72 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GVT + ++ +R +++ +I +D F RT K H + + ++K++ + G + + Sbjct: 73 LEEGVTPEELCEKYNRIHQEVYKWFNIGFDIFGRTPTKPHTEISQGIFKRLYENGYLEEK 132 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH-----------------NP 156 + + +++ D V Y A G Q QH P Sbjct: 133 TTEQPFCEKHDSFLADRFVEGECPRCHYDDARGDQCDKCQHLLDPFDLINPRCKVDGATP 192 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE-FILPIERRNEVISFVKSGLKDLSLSRKTFD 215 V+ + F L Q ++ S+ S E P R S++K GL+ ++R Sbjct: 193 VR-RQTRHIFLLLDKLQPQIDSWASSAFEKGDWPKNSRVITGSWLKEGLQPRGITRD-LK 250 Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDIL 268 WG+ +P D + ++YVW +A Y + T N K+W P D+ + +GKD + Sbjct: 251 WGVPVPLDGYEKKVLYVWFEACIGYPSITA---NYTPEWEKWWRNPEDVQLYQFLGKDNV 307 Query: 269 RFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325 FHA+ +P L + + + ++ ++G K SKS G + E V D Sbjct: 308 PFHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGNNAKETGVSSDVW 367 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAF 383 RY+L++ D ++ N +L +GNLV+R + ++ K Y+ +IP Sbjct: 368 RYYLLKNRPESGDTQFEWKSFIDSNNGELLAKLGNLVNRVIKLVASPKAYNSVIPE-FTV 426 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPD 442 TE L + +L++ M+ + + + + + A K L P+ Sbjct: 427 TEPFYPALEEVTSLLRQYINEMEGVHLRAGILTAMKIAEAGNGLIQANKLDNSLIANEPE 486 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 RA+TV+ + V +I + + ++P I + L Sbjct: 487 RAATVVGIVVNLIHLCSSIFCPYLPATCVSILEQL 521 >gi|303320629|ref|XP_003070314.1| methionyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240110000|gb|EER28169.1| methionyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] Length = 657 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 121/521 (23%), Positives = 229/521 (43%), Gaps = 53/521 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 K + + +++A+ Y N PH+G+ ++ ADV AR+H+ G L+ GTDE+G Sbjct: 10 QKGQRNILVTSALPYVNNVPHLGNIVGSVLSADVFARYHKACGRPTLYVCGTDEYGTATE 69 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A GVT + + ++ +++ + +I +D F RT ++H + + ++K++ G + Sbjct: 70 TKALEEGVTPEELCAKYNKIHQEVYEWFEIGFDFFGRTPTQKHTEISQSIFKRLYKNGYL 129 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----------------NPVQWMEE 162 + + + +++ D V +Y+ NP ++ Sbjct: 130 EEKTAEQPFCEKHQSFLADRYVEGECPRCHYDDARGDQCDKCGSLLDPFDLINPRCKVDG 189 Query: 163 EGYFFRLSAYQDKLLSYYESHPE-FILP-IER-----RNEVI--SFVKSGLKDLSLSRKT 213 R + + LL + E ++ P IE+ + VI S++K GLKD ++R Sbjct: 190 ATPVSRPTKHIHLLLDKLQPQIEDWVRPAIEKGDWPKNSRVITESWLKEGLKDRGITRD- 248 Query: 214 FDWGIKIPDDP--QYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW---PADLHV---IG 264 WG+ +P + ++YVW +A Y + T Y D+ + W P D+ + +G Sbjct: 249 LKWGVPVPLEGYDNKVLYVWFEACIGYPSITANYTDD-----WELWWRNPEDVRLYQFLG 303 Query: 265 KDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321 KD + FHA+ +P L N + + + ++ ++ K SKS G V + Sbjct: 304 KDNVPFHAVIFPGCQLGTKDNWTMLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKDTGIP 363 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPT 379 D RY+L++ D ++ N +L +GNLV+R V +I K Y ++P Sbjct: 364 PDVWRYYLLKNRPETGDTQFEWRSFIDANNGELLAKLGNLVNRVVKLIASPKAYSSVVPD 423 Query: 380 PGAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWEL 436 FT ES IL + +L++ E M+ + L + + + + K L Sbjct: 424 ---FTIPESFNPILDDVTAILRQYIEEMEGVHLRAGLITAMRVAEAGNNLIQSNKLDNSL 480 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P+RA+TV+ + +I A + ++P + I + L Sbjct: 481 IANEPERAATVVGIVTNLIHLCASVFSPYLPATSKSILEQL 521 >gi|328865789|gb|EGG14175.1| methionyl-tRNA synthetase [Dictyostelium fasciculatum] Length = 733 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 118/519 (22%), Positives = 224/519 (43%), Gaps = 61/519 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ +++ DV +R+ RL G + ++ GTDE+G A Sbjct: 23 QRNILITSALPYVNNVPHLGNIIGCVLSGDVYSRYCRLKGHNCIYICGTDEYGTATETKA 82 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T K D+ +++ + +I +D F RT+ + + + ++ K+ G + Sbjct: 83 LQEKCTPKEICDRYHAIHKEIYEWFNIGFDKFGRTSTQSQTEITQDIFMKLHQNGLTFSD 142 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWME---------- 161 + + + + D V Y+ A G + NP ++ Sbjct: 143 TVEQLFCEQCKIFLADRYVEGICPHCQYEDARGDQCDKCTKLLNPTDLIQPRCKVCSTTP 202 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + F L Q++L ++ + +N S+VK LK ++R WG Sbjct: 203 IIKSTKHIFLDLPKVQERLDTFVQGS-SGKWSENSQNITNSWVKGELKPRCITRD-LKWG 260 Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVI---GKDILRF 270 +P + + + YVW DA YL+ T K+W P ++ ++ GKD + F Sbjct: 261 TPVPLEEFKEKVFYVWFDAPIGYLSITKEYTK---EWEKWWKNPENVELVQFMGKDNVPF 317 Query: 271 HAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGN-VIDPIEVIEEVGVDALRY 327 H + +P+ L+ P + + + ++ ++ K SKS V ++ D R+ Sbjct: 318 HTVIFPSSLIGTEDPYTMLHNLSTTEYLNYETGKFSKSRNTGVFGDGARDTKIPADIWRF 377 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 +L+ D + D + +L N GNLV+R + + ++DG IP +SD Sbjct: 378 YLLSNRPEVSDSVFSWDDFSAKT-LELLNNFGNLVNRVLKFVSVNFDGKIPKID-LNDSD 435 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQV-----ISLVSEVDR----YFDAQKPWELKK 438 + + +QE+ +N++ L H AL V + L + R Y KPWE+ K Sbjct: 436 K-------KFVQEVNDNVK--LYHEALEAVRIKEGLRLAMAISRLGNQYQQENKPWEVIK 486 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 T+ R + + V I+ LA L + ++P ++ +I + L Sbjct: 487 TDKARCGASVALLVNTIKLLATLFEPYLPLISQQIHEQL 525 >gi|255711786|ref|XP_002552176.1| KLTH0B08976p [Lachancea thermotolerans] gi|238933554|emb|CAR21738.1| KLTH0B08976p [Lachancea thermotolerans] Length = 751 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 119/514 (23%), Positives = 222/514 (43%), Gaps = 51/514 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD+ AR+ + + LF GTDE+G A Sbjct: 198 ILITSALPYVNNVPHLGNIVGSVLSADIYARYCKARNYNTLFVCGTDEYGTATETKAIEE 257 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G T + D+ + D+ I +D F RTT ++ + + ++ K+++ G + + Sbjct: 258 GCTPRELCDKYHKIHSDVYKWFQIGFDYFGRTTTEKQTEIAQDIFNKLNNNGYLEEHSMK 317 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---------NPVQWME------- 161 Y +AY D V Y+ A G + NP ++ Sbjct: 318 QLYCEEHKAYLADRYVEGECPKCHYEDARGDQCDKCGGLLDPFELINPRCKLDNSKPIPR 377 Query: 162 -EEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + F L + ++ + E S E R S++K GL+ ++R WG Sbjct: 378 NSDHIFISLDKLEPRIKEWVEKSSREGGWSKNSRTITQSWLKEGLQPRCITRDLV-WGTP 436 Query: 220 IPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDILRFHA 272 +P + ++YVW DA Y++ T + DG K K+W P ++ + +GKD + FH+ Sbjct: 437 VPLEKYKDKVLYVWFDATIGYVSITA--NYTDGWK-KWWKDPENVQLYQFMGKDNVPFHS 493 Query: 273 IYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFL 329 + +P L N + + + ++ ++G K SKS G V V RY+L Sbjct: 494 VIFPGSQLGTNENWTMLHHLSTTEYLQYEGGKFSKSRGVGVFGNNAKDTGVSPSVWRYYL 553 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFT 384 D + R N++L +GN V+R V + Y+G++P F Sbjct: 554 ASVRPESSDSHFSWSDFVARNNSELLANLGNFVNRLVKFVNAKYNGVVPEYDQKQLADFV 613 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDR 443 + ++ I S+ S + E+ ++ + R L +SL + + + K L P + Sbjct: 614 KLEKDINSILSSYVSEMEQSHE----RRGLEIAMSLSARGNLFLQENKLDNSLFSEFPAK 669 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + V+ V + ++ +A ++ F+P+ A I+ +L Sbjct: 670 SDAVVGVGLNIVYSVASVIYPFMPEAAETIYKML 703 >gi|119184836|ref|XP_001243278.1| hypothetical protein CIMG_07174 [Coccidioides immitis RS] Length = 657 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 120/521 (23%), Positives = 229/521 (43%), Gaps = 53/521 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 K + + +++A+ Y N PH+G+ ++ ADV AR+H+ G L+ GTDE+G Sbjct: 10 QKGQRNILVTSALPYVNNVPHLGNIVGSVLSADVFARYHKACGRPTLYVCGTDEYGTATE 69 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A GVT + + ++ +++ + +I +D F RT ++H + + ++K++ G + Sbjct: 70 TKALEEGVTPEELCAKYNKIHQEVYEWFEIGFDFFGRTPTQKHTEISQSIFKRLYKNGYL 129 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----------------NPVQWMEE 162 + + + +++ D V +Y+ NP ++ Sbjct: 130 EEKTAEQPFCEKHQSFLADRYVEGECPRCHYDDARGDQCDKCGSLLDPFDLINPRCKVDG 189 Query: 163 EGYFFRLSAYQDKLLSYYESHPE-FILP-IER-----RNEVI--SFVKSGLKDLSLSRKT 213 R + + LL + E ++ P IE+ + VI S++K GLKD ++R Sbjct: 190 ATPVSRPTKHIHLLLDKLQPQIEDWVRPAIEKGDWPKNSRVITESWLKEGLKDRGITRD- 248 Query: 214 FDWGIKIPDDP--QYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW---PADLHV---IG 264 WG+ +P + ++YVW +A Y + T Y D+ + W P D+ + +G Sbjct: 249 LKWGVPVPLEGYDNKVLYVWFEACIGYPSITANYTDD-----WELWWRNPEDVRLYQFLG 303 Query: 265 KDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321 KD + FHA+ +P L N + + + ++ ++ K SKS G V + Sbjct: 304 KDNVPFHAVIFPGCQLGTKDNWTMLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKDTGIP 363 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPT 379 D RY+L++ D ++ N +L +GNLV+R V +I K Y ++P Sbjct: 364 PDVWRYYLLKNRPETGDTQFEWRSFIDANNGELLAKLGNLVNRVVKLIASPKAYSSVVPD 423 Query: 380 PGAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWEL 436 FT ES +L + +L++ E M+ + L + + + + K L Sbjct: 424 ---FTIPESFNPVLDDVTAILRQYIEEMEGVHLRAGLITAMRVAEAGNNLIQSNKLDNSL 480 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P+RA+TV+ + +I A + ++P + I + L Sbjct: 481 IANEPERAATVVGIVTNLIHLCASVFSPYLPATSKSILEQL 521 >gi|312374412|gb|EFR21973.1| hypothetical protein AND_15967 [Anopheles darlingi] Length = 1133 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 127/520 (24%), Positives = 216/520 (41%), Gaps = 69/520 (13%) Query: 9 ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N PH+G+ ++ AD+ AR+ RL G + L+ GTDE+G A + Sbjct: 419 ITSALPYVNNVPHLGNIVGCVLSADIFARYSRLCGYNTLYIGGTDEYGTATETKALAENM 478 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + D+ + I +D F RTT + L+ ++ KG I Sbjct: 479 TPRQICDKYFDIHNSIYRWFGIGFDYFGRTTTTEQTRIVQELFGELYAKGYIETRAVEQL 538 Query: 128 YSLRDEAYYNDDEV----------YKGADG-------QYYNAQH---------NPVQWME 161 + + Y D V Y+ A G + NA N M Sbjct: 539 LCTKCDRYLADRFVEGTCPHPGCGYEDARGDQCDGCGKLVNAIELLRPRCKVCNSSPIMR 598 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRN-------EVI--SFVKSGLKDLSLSRK 212 E FF L + PE I+R + VI S++K GLK ++R Sbjct: 599 ESNQFF---------LDLPKIEPELRAWIDRSDPGWTHNARVITRSWLKEGLKSRCITRD 649 Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLD------NPDGSKAKFWPADLHVI 263 WGI +P + + + YVW DA Y++ T+ Y PD + + Sbjct: 650 -LKWGIPVPVEGYEKKVFYVWFDAPIGYISITSRYCKEWKQWWQPDTANTGVKVDLYQFM 708 Query: 264 GKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEV 320 KD + FH++ +PA LL+ N L + + ++ ++ K SKS G V + Sbjct: 709 AKDNVPFHSVMFPASLLAVNQGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQDTGI 768 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D R++L G+D + L+ R N +L +GN V+R++ K +D IP P Sbjct: 769 PADVWRFYLGASRPEGQDSSFSWSDLQARNNNELLKNLGNFVNRALVFCEKFFDSTIP-P 827 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKT 439 E D ++L++ +R L+ M+ + + ++ + +++ ++PW ++K T Sbjct: 828 MTLIEDDYTLLALANRELKGYVHQMEKARMRDGIRHMLQISRYGNQFMQNEEPWVKVKGT 887 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + +A L LA L+ F+P A ++ L V Sbjct: 888 DEQKARAGL---------LATLIFPFMPATARNLYSQLNV 918 >gi|195384499|ref|XP_002050955.1| GJ22433 [Drosophila virilis] gi|194145752|gb|EDW62148.1| GJ22433 [Drosophila virilis] Length = 1016 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 119/517 (23%), Positives = 223/517 (43%), Gaps = 55/517 (10%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD+ AR+ R G + L GTDE+G A Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIFARYSRSAGYNTLLICGTDEYGTATENKALAE 315 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 +T + D+ + I +D F RTT + D + + + G I Sbjct: 316 NMTPREICDKYFELHNSIYRWFGIGFDYFGRTTTQEQTDIVQEAFHDVYKAGYILTESVE 375 Query: 126 GWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME---------EEGYF 166 + + + D V Y+ A G + V E Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELVRPRCKVCNSAPV 435 Query: 167 FRLSAYQDKL-LSYYESHPEFILPIERRNE-------VIS--FVKSGLKDLSLSRKTFDW 216 R S D+L L ++ P+ ++R + VI+ +++ GLK ++R W Sbjct: 436 LRSS---DQLFLDLPKAEPQLREWVDRVEQGWTHNARVITRAWLREGLKPRCITRD-LKW 491 Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD------LHVIGKDI 267 GI +P + + YVW DA Y++ T ++W PA + KD Sbjct: 492 GIPVPHKNFEKKVFYVWFDAPFGYVSMTKRYTK---EYLQWWQPAAGTNVELFQFMAKDN 548 Query: 268 LRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--D 323 + FH++ WP+ LL+ N L + + ++ ++ K SKS G + + +E G+ D Sbjct: 549 VPFHSVVWPSVLLAINKGNTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDA-QETGIPAD 607 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 R++L G+D + + L R N++L N +GN V+R++ K+++ +P Sbjct: 608 VWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFNSTVPQI-VL 666 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD- 442 + + +L++ +R L+ +++ + + ++++ + Y Q+PW L K N + Sbjct: 667 NQDELVLLALINRELRGYINSLEKAKLRDGIRHLLAISRHGNGYMQTQQPWVLLKGNDEQ 726 Query: 443 --RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 RA+T++ + + LA LL ++P A +F L Sbjct: 727 KSRAATIIGLCANIACLLANLLFPYMPSTARNLFAQL 763 >gi|320041417|gb|EFW23350.1| methionyl-tRNA synthetase [Coccidioides posadasii str. Silveira] Length = 657 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 120/521 (23%), Positives = 229/521 (43%), Gaps = 53/521 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 K + + +++A+ Y N PH+G+ ++ ADV AR+H+ G L+ GTDE+G Sbjct: 10 QKGQRNILVTSALPYVNNVPHLGNIVGSVLSADVFARYHKACGRPTLYVCGTDEYGTATE 69 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A GVT + + ++ +++ + +I +D F RT ++H + + ++K++ G + Sbjct: 70 TKALEEGVTPEELCAKYNKIHQEVYEWFEIGFDFFGRTPTQKHTEISQSIFKRLYKNGYL 129 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----------------NPVQWMEE 162 + + + +++ D V +Y+ NP ++ Sbjct: 130 EEKTAEQPFCEKHQSFLADRYVEGECPRCHYDDARGDQCDKCGSLLDPFDLINPRCKVDG 189 Query: 163 EGYFFRLSAYQDKLLSYYESHPE-FILP-IER-----RNEVI--SFVKSGLKDLSLSRKT 213 R + + LL + E ++ P IE+ + VI S++K GLKD ++R Sbjct: 190 ATPVSRPTKHIHLLLDKLQPQIEDWVRPAIEKGDWPKNSRVITESWLKEGLKDRGITRD- 248 Query: 214 FDWGIKIPDDP--QYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW---PADLHV---IG 264 WG+ +P + ++YVW +A Y + T Y D+ + W P D+ + +G Sbjct: 249 LKWGVPVPLEGYDNKVLYVWFEACIGYPSITANYTDD-----WELWWRNPEDVRLYQFLG 303 Query: 265 KDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321 KD + FHA+ +P L N + + + ++ ++ K SKS G V + Sbjct: 304 KDNVPFHAVIFPGCQLGTKDNWTMLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKDTGIP 363 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPT 379 D RY+L++ D ++ N +L +GNLV+R V +I K Y ++P Sbjct: 364 PDVWRYYLLKNRPETGDTQFEWRSFIDANNGELLAKLGNLVNRVVKLIASPKAYSSVVPD 423 Query: 380 PGAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWEL 436 FT ES +L + +L++ E M+ + L + + + + K L Sbjct: 424 ---FTIPESFNPVLDDVTAILRQYIEEMEGVHLRAGLITAMRVAEAGNNLIQSNKLDNSL 480 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P+RA+TV+ + +I A + ++P + I + L Sbjct: 481 IANEPERAATVVGIVTNLIHLCASVFSPYLPATSKSILEQL 521 >gi|156096647|ref|XP_001614357.1| tRNA ligase [Plasmodium vivax SaI-1] gi|148803231|gb|EDL44630.1| tRNA ligase, putative [Plasmodium vivax] Length = 535 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 109/196 (55%), Gaps = 9/196 (4%) Query: 52 DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111 DEHG KI + ++ ++ V+ S ++ M L + + F RTT + H + +WK Sbjct: 2 DEHGLKIERKSKKLEISIAEHVNNMSSYYQMMNQKLHVHVNIFYRTTSQFHKSFVQQVWK 61 Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEE-GYFFRL 169 +++ G IYKG Y G+Y + +E Y N+ E+ + +++P V ++EEE YFF + Sbjct: 62 YLAENGYIYKGTYRGYYDVNEEKYLNEFELKQ-------KRKNDPSVLYIEEENSYFFNI 114 Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229 +++ L Y+ E I P + E++ FV LKD+ +SR WGIKIP + + +Y Sbjct: 115 LKFKNFLTDLYQRSEEVIYPSYLQKEMLHFVNHELKDVCISRYNTQWGIKIPGEEKGTIY 174 Query: 230 VWIDALTNYLTTTGYL 245 VW DAL +Y+++ ++ Sbjct: 175 VWFDALLSYVSSVLHM 190 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 120/224 (53%), Gaps = 8/224 (3%) Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 K W ++ +IGKDIL+FH + + L S +L LPKK+ HG I + K+SK++GNVI P Sbjct: 283 KAWNPEVQIIGKDILKFHGVLYICLLQSLHLKLPKKILCHGLIKSENVKMSKTIGNVISP 342 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA---DLANGIGNLVSRSVSMIL 370 +++++ D +R + C + F DK+ K + + + N +GNL+ R VS+ + Sbjct: 343 FDIVQKYDTDIVRLYF---FGCA-NIFEDKNFKKTHLESFQLFVRNNVGNLIYRVVSLCV 398 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 I G + IL CS Q++ + N+ L +++L+ +V+++F Sbjct: 399 DSNYLNIFQIGETDFLESPILRQCSESKQKLVALIHNREFPLFLENLMTLIKQVNKFFVH 458 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 ++PW+ + R + ++Y T+E I+ +++ L +P + + I Sbjct: 459 REPWKCTD-DSVRFNRIIYETLEGIKFVSVFLYPIMPHICSSIL 501 >gi|241956011|ref|XP_002420726.1| methionyl-tRNA synthetase, cytoplasmic, putative [Candida dubliniensis CD36] gi|223644068|emb|CAX41811.1| methionyl-tRNA synthetase, cytoplasmic, putative [Candida dubliniensis CD36] Length = 748 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 114/517 (22%), Positives = 226/517 (43%), Gaps = 44/517 (8%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + + I++A+ Y N PH+G+ ++ AD+ +R+ + + LF GTDE+G Sbjct: 185 DERNILITSALPYVNNVPHLGNIVGSVLSADIYSRYAKNRNYNTLFICGTDEYGTATETK 244 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A VT + D+ +++ D DI +D F RTT + + ++ K+ +KG + + Sbjct: 245 ALEENVTPQQLCDKYHAIHKEVYDWFDIGFDYFGRTTTPLQTEIAQDIFMKLHNKGYLEE 304 Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN---PVQWM---------- 160 Y +++ D V Y+ A G + N P++ + Sbjct: 305 KTTEQLYCEHHKSFLADRFVEGTCPKCDYEDARGDQCDKCGNLLDPLELINPRCKVDGNT 364 Query: 161 ----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 E + +L+ ++ L + +S + +N S++K GL+ ++R Sbjct: 365 PVVKESTHIYLKLNDLEEPLKEWVLDSSAKGAWSKNSKNITDSWIKRGLEPRCITRDLI- 423 Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTG--YLDNPDGSKAKFW--PADL---HVIGKD 266 WG +P + ++YVW DA Y++ T + D+ K+W P ++ +GKD Sbjct: 424 WGTPVPLKGYDKKVLYVWFDATIGYVSITANYFKDSNTDDYLKWWRNPENVDLYQFMGKD 483 Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD- 323 + FH + +PA + K + + ++ ++ K SKS G + +E GV Sbjct: 484 NVPFHTVVFPASQIGTGDKWTKLHHLSTTEYLQYENGKFSKSRGVGVFGNNA-KETGVSP 542 Query: 324 -ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 RY+L +D + D + N++L +GN V+R V ++ Y+G+IP Sbjct: 543 SVWRYYLASNRPETQDAHFSWDEFVAKNNSELLANLGNFVNRIVKFVIAKYNGVIPKFDT 602 Query: 383 FTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTN 440 D + +L +NM+N + + L +++ S +++ D + L Sbjct: 603 KNIPDYGKFETDINSLLASYIDNMENVNLRKGLELAMAISSRGNQFLQDNKLDNSLYANQ 662 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P ++ V+ V + ++ ++ ++ F+P+ KI IL Sbjct: 663 PAKSDAVVAVAINLVYLVSAIIYPFMPETTAKIDQIL 699 >gi|327301905|ref|XP_003235645.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892] gi|326462997|gb|EGD88450.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892] Length = 650 Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 119/517 (23%), Positives = 224/517 (43%), Gaps = 51/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV +R+++ G L+ GTDE+G A Sbjct: 13 KRNILITSALPYVNNVPHLGNIVGSVLSADVFSRYNKACGRPTLYVCGTDEYGTATETKA 72 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GVT + + ++ +++ +I +D F RT K H + + ++K++ + G + + Sbjct: 73 LEEGVTPEELCSKYNKIHQEVYSWFNIGFDIFGRTPTKAHTEISQSIFKRLYEHGYLEEK 132 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH-----------------NP 156 + + +++ D V Y A G Q QH P Sbjct: 133 TTEQPFCEKHDSFLADRFVEGECPRCHYDDARGDQCDKCQHLLDPFDLINPRCKVDGATP 192 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE-FILPIERRNEVISFVKSGLKDLSLSRKTFD 215 ++ + + F L Q + S+ + E P R S++K GL+ ++R + Sbjct: 193 IR-RKTKHIFLLLDKLQPDIESWAATASEKGDWPKNSRVITGSWLKEGLQPRGITRD-LN 250 Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDIL 268 WG+ +P D + ++YVW +A Y + T N K+W P ++ + +GKD + Sbjct: 251 WGVPVPLDGFERKVLYVWFEACIGYPSITA---NYTSEWEKWWRSPEEVQLYQFLGKDNV 307 Query: 269 RFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325 FHA+ +P L + + + ++ ++G K SKS G + E V D Sbjct: 308 PFHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGNNAKETGVSSDVW 367 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAF 383 RY+L++ D ++ N +L +GNLV+R V ++ K Y +IP F Sbjct: 368 RYYLLKNRPETGDTQFEWKSFIDSNNGELLAKLGNLVNRVVKLVASPKAYSSVIPE---F 424 Query: 384 TESDE--SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTN 440 T S+ L S +L++ M+ + + + + + A K L Sbjct: 425 TVSEAFYPALEEVSSLLRQYINEMEGVHLRAGIVTAMKIAEAGNGLIQANKLDNSLIANE 484 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P+RA+ V+ + V +I + + ++P + I D L Sbjct: 485 PERAAAVVGIVVNLIHLCSSVFCPYLPATSASILDQL 521 >gi|158297351|ref|XP_317601.4| AGAP007891-PA [Anopheles gambiae str. PEST] gi|157015154|gb|EAA12906.4| AGAP007891-PA [Anopheles gambiae str. PEST] Length = 977 Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 120/513 (23%), Positives = 210/513 (40%), Gaps = 44/513 (8%) Query: 9 ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N PH+G+ ++ AD+ AR+ RL G + L+ GTDE+G A + Sbjct: 263 ITSALPYVNNVPHLGNIVGCVLSADIFARYSRLCGYNTLYIGGTDEYGTATETKALAENM 322 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + D+ + I +D F RTT + ++K++ G I Sbjct: 323 TPRQICDKYFDIHNSIYRWFGIGFDYFGRTTTAEQTRIVQDIFKELYASGYIETRSVEQL 382 Query: 128 YSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME---------------- 161 + + Y D V Y+ A G + V +E Sbjct: 383 LCQKCDRYLADRFVEGTCPHPGCGYEDARGDQCDGCGKLVNAVELLRPRCKMCNTSPVIR 442 Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 E FF + L + E R +++K GLK ++R WGI +P Sbjct: 443 ESSQFFLDLPKIEPTLREWVDRSEGGWTHNARVITRAWLKEGLKSRCITRD-LKWGIPVP 501 Query: 222 DD--PQYIMYVWIDALTNYLT-TTGYLD------NPDGSKAKFWPADLHVIGKDILRFHA 272 + + + YVW DA Y++ T+ Y PD + + KD + FH+ Sbjct: 502 LEGYEKKVFYVWFDAPIGYISITSRYCKEWKQWWQPDTANTGVKVDLYQFMAKDNVPFHS 561 Query: 273 IYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFL 329 + +PA LL+ + L V + ++ ++ K SKS G V + D R++L Sbjct: 562 VMFPASLLAVDKGYTLVSHVMATEYLNYEDGKFSKSRGIGVFGNDAQDTGIPADVWRFYL 621 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 G+D + L+ R N++L +GN +R++ K +D IP P E D + Sbjct: 622 GAARPEGQDSSFSWSDLQARNNSELLKNLGNFFNRALVFCEKFFDSTIP-PMTLLEEDYT 680 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RAST 446 +L++ +R L+ M+ + + ++ + ++ +++PW K D RA T Sbjct: 681 LLALINRELKGYVNQMEKARMRDGIRHLLQISRYGNQLMQSEEPWVKVKGTDDQKARAGT 740 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 V+ + LA L+ F+P A ++ L V Sbjct: 741 VIGLCCNFACLLATLIFPFMPTTARNMYSQLNV 773 >gi|255939616|ref|XP_002560577.1| Pc16g02040 [Penicillium chrysogenum Wisconsin 54-1255] gi|211585200|emb|CAP92874.1| Pc16g02040 [Penicillium chrysogenum Wisconsin 54-1255] Length = 649 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 117/512 (22%), Positives = 225/512 (43%), Gaps = 49/512 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + +++A+ Y N PH+G+ ++ ADV AR+H+ G L+ GTDE+G A Sbjct: 14 ILVTSALPYVNNVPHLGNVVGSVLSADVFARYHKACGRRTLYICGTDEYGTATETKALEE 73 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 ++ + + ++ +D+ + +I +D F RT ++H D + ++K++ + G + + Sbjct: 74 KMSPEDLCAKYNKIHQDVYEWFNIGFDHFGRTPTQKHTDISQSIFKRLHENGYLGERTAE 133 Query: 126 GWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEEEGYFFR 168 + + ++ D V Y A G Q H NP ++ R Sbjct: 134 QPFCEQHGSFLADRFVEGECPRCHYDDARGDQCDKCGHLLDPFDLINPRCKIDGAAPVRR 193 Query: 169 LSAY----QDKLLSYYE--SHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219 + + DKL E +HP RN I S++K GLK ++R WG+ Sbjct: 194 ETKHIHILLDKLQPEIEKWAHPAIEKGNWPRNSRIITESWLKEGLKGRGITRD-LKWGVP 252 Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKDILRFH 271 +P + ++YVW +A Y + T Y D+ + K+W P D+ + +GKD + FH Sbjct: 253 VPLEGYENKVLYVWFEACIGYPSITANYTDDWE----KWWRNPEDVQLWQFLGKDNVPFH 308 Query: 272 AIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328 ++ +P + + + + ++ ++G K SKS G + E V D RYF Sbjct: 309 SVIFPGTQIGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGVGVFGTNARETGVPADVWRYF 368 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--ES 386 L++ D ++ N +L +GNLV+R + ++ Y +IP FT E+ Sbjct: 369 LLKNRPETGDTQFEWAPFVDSNNGELLAKLGNLVNRIIKLVTASYGSVIP---EFTVPET 425 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRAS 445 L + L++ E+++ + + + + + A + L P+RA+ Sbjct: 426 FNPFLEEVTEHLRQYHEDLEGAHLRAGVQTAMRIAEAGNGLIQANRLDNALIANEPERAA 485 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V+ + +I L+ + ++P + I + L Sbjct: 486 AVVGTVLNLIHLLSSVFSPYMPATSKSILEQL 517 >gi|302417150|ref|XP_003006406.1| methionyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] gi|261354008|gb|EEY16436.1| methionyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] Length = 679 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 127/550 (23%), Positives = 231/550 (42%), Gaps = 74/550 (13%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 +K + + +++A+ Y N PH+G+ ++ ADV ARF R G +F G+DE+G Sbjct: 10 VKGKNNVLVTSALPYVNNTPHLGNVIGSVLSADVFARFSRARGNPTIFICGSDEYGTATE 69 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH----HDTCRILWKK--- 112 A GV + + + + + ++S+D F RT ++ D R LW+ Sbjct: 70 TKALEEGVDPETLCRKYHAVHKGIYEWFNLSFDIFGRTPTEQQTEIVQDIFRKLWQNGYI 129 Query: 113 ----------------ISDK---------------GDIYKGCYSGWYSLRDEAYYN---- 137 ++D+ GD C + L E Sbjct: 130 EERETTQPFCPVHHSFLADRFVEGECSLCGYNDARGDQCDKCGNLLDPLEPEPEAGNAKP 189 Query: 138 DDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE-SHPEFILPIE 191 DD++ A G N + P + + + F RL A ++ L+ +++ + E Sbjct: 190 DDDIAAKATGWLINPRCKLDGAKPDK-KQTKHLFLRLDALKEPLIDWFKKASTEGAWSTS 248 Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD------PQYIMYVWIDALTNYLT-TTGY 244 + +++ GLK ++R WG+ +P D + YVW DA Y++ T Y Sbjct: 249 AQTITQAWIDKGLKPRGITRD-LKWGVPVPTDVTGEDYAAKVFYVWFDACIGYVSITKNY 307 Query: 245 LDNPD--GSKAKFW---PADLHV---IGKDILRFHAIYWPAFLLSANLPLPK--KVFSHG 294 D D G K + W P ++ + +GKD ++FH+ +PA L N K K+ + Sbjct: 308 TDGADLAGKKWEQWWKNPDEVKLYQFLGKDNVQFHSTVFPASQLGTNENWTKVHKISATE 367 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNA 352 ++ ++G K SKS G + +V +E GV D RY+L+ D + L N Sbjct: 368 YLNYEGGKFSKSRGVGVFGNQV-QETGVPSDVWRYYLLSRRPETSDSEFMWQELVDGNNN 426 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--ESILSVCSRVLQEIRENMQNQLI 410 +L +GN R + D +P F +D ++ + + L+E NM+ Sbjct: 427 ELLKNLGNFCQRVIKFAQAKLDTTVPDYTKFGLNDYLKNHVKEVNVNLKEYIANMEGTKF 486 Query: 411 HRALAQVISLVSEVDRYF-DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 L ++S+ + ++ D + +L PDR + ++ + + I +A +L ++P Sbjct: 487 RDGLRSILSISALGNKLLQDNKLDNKLLTEEPDRCAAIIGLALNQIALIASILNPYMPVT 546 Query: 470 ANKIFDILFV 479 + IF+ L V Sbjct: 547 SKAIFEQLGV 556 >gi|310797897|gb|EFQ32790.1| methionyl-tRNA synthetase [Glomerella graminicola M1.001] Length = 674 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 130/548 (23%), Positives = 225/548 (41%), Gaps = 70/548 (12%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 +K + + I++A+ Y N PH+G+ ++ ADV AR+ R G ++ G+DE+G Sbjct: 9 VKGKNNVLITSALPYVNNVPHLGNIIGSVLSADVFARYSRARGNPTVYVCGSDEYGTATE 68 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH----HDTCRILWKK--I 113 A GVT + + + D DIS+D F RT + D LWK I Sbjct: 69 TKALEEGVTPSELCAKYHALHKGIYDYFDISFDIFGRTPTPQQTEIVQDIFTKLWKNGFI 128 Query: 114 SDKGDIYKGC----YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE------ 163 ++ C + + + R Y GA G + N + +E E Sbjct: 129 EERETTQPFCPVEAHQSFLADRFVEGVCSICAYDGARGDQCDKCGNLLDPLEPEPEANAT 188 Query: 164 ----------GY---------------------FFRLSAYQDKLLSYY-ESHPEFILPIE 191 G+ F RL + +D+L+ ++ ES + Sbjct: 189 AEDDIAAKPTGFLIKPRCKLDGATPEKRKTKHLFLRLDSLRDELVKWFKESSKKGAWSNN 248 Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP------DDPQYIMYVWIDALTNYLT-TTGY 244 +++ GLK ++R WG+ IP D + + YVW DA Y++ T Y Sbjct: 249 AEQITQAWIDKGLKPRGITRD-LKWGVPIPTHEVGQDYAKKVFYVWFDACIGYVSITKNY 307 Query: 245 LDNPD--GSKAKFW---PADLHV---IGKDILRFHAIYWPAFLLSANLPLPK--KVFSHG 294 D D G K + W P D+ + +GKD ++FH I +P L+ K K+ + Sbjct: 308 TDGDDLAGKKWEQWWKNPDDVKLYQFMGKDNVQFHTIIFPGSLIGTGENWTKLHKISTTE 367 Query: 295 FILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 ++ ++G K SKS G + +V + V VD RY+L+ D + + N + Sbjct: 368 YLNYEGGKFSKSRGVGVFGNQVQQTGVPVDVWRYYLLSRRPETSDSEFMWQEMVDGNNNE 427 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD-ESILSVCSRVLQEIRENMQNQLIHR 412 L +GN R DG++P +T+ + + + +L+E NM+ + Sbjct: 428 LLKNLGNFCQRVNKFCQAKTDGVVPDYTKYTDDYLKKHIGEVNTLLKEYISNMEATKMRA 487 Query: 413 ALAQVISLVSEVDRYF-DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 L ++S+ + ++ D + L PDR + V+ + + I LA L+ ++P + Sbjct: 488 GLQTIMSISALGNKLLQDNKLDNRLLTEEPDRCAAVVGLALNQIDLLASLVAPYLPNTST 547 Query: 472 KIFDILFV 479 I L V Sbjct: 548 AILKQLGV 555 >gi|149238245|ref|XP_001524999.1| methionyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239] gi|146451596|gb|EDK45852.1| methionyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239] Length = 755 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 119/522 (22%), Positives = 227/522 (43%), Gaps = 51/522 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + + I++A+ Y N PH+G+ ++ AD+ AR+ + + +F GTDE+G Sbjct: 189 DERNILITSALPYVNNVPHLGNIVGSVLSADIYARYAKNRNYNAIFICGTDEYGTATETK 248 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD-IY 120 A GVT + D+ + + + D DI +D F RTT + + ++KK+ DKG+ + Sbjct: 249 ALEDGVTPQQLCDKYHKIHKQVYDWFDIGFDYFGRTTTPLQTEIAQDIFKKL-DKGEYLE 307 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWMEEEG----- 164 + Y ++ D V Y+ A G + +P++ +E Sbjct: 308 EKTTEQLYCEHHHSFLADRFVEGICPKCGYEDARGDQCDKCGQLLDPLELIEPRCKVDGT 367 Query: 165 ---------YFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + +L+ + L + + S + + S++K GL+ ++R Sbjct: 368 KPIVKPSTHIYLKLNELETPLKEWVDISSEKGAWSKNSKTITNSWIKQGLEPRCITRD-L 426 Query: 215 DWGIKIPDDPQY---IMYVWIDALTNYLT-TTGYLDNPDGSKAKFW------PADL---H 261 WG +P P Y ++YVW DA Y++ T Y + D S W P ++ Sbjct: 427 KWGTPVPR-PGYEDKVLYVWFDATIGYVSITANYFKSIDESSVDNWQKWWKNPENVDLYQ 485 Query: 262 VIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 +GKD + FH + +PA + N + + ++ ++G K SKS G + EE Sbjct: 486 FMGKDNVPFHTVVFPASQIGTGDNWTKLHHLSTTEYLQYEGGKFSKSRGVGVFGNNA-EE 544 Query: 320 VGVDA--LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 GV A RY+L D + D + N++L +GN V+R V + Y+G++ Sbjct: 545 TGVPASVWRYYLASSRPETSDAHFSWDDFVTKNNSELLANLGNFVNRIVKFAIAKYNGVL 604 Query: 378 PTPGAFTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWE 435 P + + L+ + +L +NM+ + + L + + S +++ K Sbjct: 605 PQYDTKNIPNYDQFLTDINTLLGTYIKNMEAVNLRKGLETAMLISSRGNQFLQENKLDNT 664 Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L PD++ V+ + + ++ ++ ++ F+P KI +IL Sbjct: 665 LYNEYPDKSDAVVAIGLNLVYLVSAVISPFMPDTTKKINEIL 706 >gi|256078304|ref|XP_002575436.1| methionine-tRNA synthetase [Schistosoma mansoni] gi|238660675|emb|CAZ31669.1| methionine-tRNA synthetase, putative [Schistosoma mansoni] Length = 593 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 116/510 (22%), Positives = 210/510 (41%), Gaps = 79/510 (15%) Query: 7 LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ + A+V A + L G +VL GTDE+G A + Sbjct: 51 VMITSALPYVNNVPHLGNMIGSTLSANVFALYCDLAGYNVLSICGTDEYGTATEAKAVSE 110 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 +T + D+ + D+ I +D F RTT +H + + ++K++ DKG I + Sbjct: 111 NMTPRQICDKFHKLHCDIYKWFQIEFDYFGRTTTDQHTEIVQEVFKRLWDKGFITEDSVE 170 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQ---HNPVQWME------------- 161 Y + + D V Y A G + N V+ +E Sbjct: 171 QLYCEKCSKFLADRFVEGVCPLCKYHDARGDQCDKCGRLMNAVELIEPRCKMCSQKPVVR 230 Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWG 217 F L ++KL ++ E + N S+++ GLK ++R WG Sbjct: 231 SSRHLFLDLPKIENKLNTFVEQRINDSSCVWTSNACTISSSWLRDGLKPRCITRD-LHWG 289 Query: 218 IKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD------LHVIGKDIL 268 + +P + + YVW DA Y++ T N ++W P+D + KD + Sbjct: 290 VPVPLEAYKDKVFYVWFDATIGYMSITA---NYTKHWKQWWQPSDNNEIELFQFMAKDNV 346 Query: 269 RFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326 FHAI +PA LL+A+ L K + S ++ ++ K SKS G Sbjct: 347 PFHAIVFPACLLAADAGYTLVKHLLSTEYMNYENTKFSKSRG------------------ 388 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 G + D +K V +D + S+S + + ++ +IP+ Sbjct: 389 -----------IGVFGDDAMKSGVISD----VWRFYLLSLSFVSRFFNSIIPSITKLEPV 433 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL--KKTNPDRA 444 D L+ +++ NM++ + A+ V+++ + YF A +PW K +R+ Sbjct: 434 DTEFLARINKLFATYIHNMESCHLRDAIRNVLTIARLGNGYFQANQPWVAVKKPETKERS 493 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIF 474 V+ V + L ++ F+P + +I+ Sbjct: 494 GVVISVAANIACLLGAMIYPFMPTIGKQIW 523 >gi|315274509|ref|ZP_07869421.1| methionyl-tRNA synthetase [Listeria marthii FSL S4-120] gi|313615859|gb|EFR89075.1| methionyl-tRNA synthetase [Listeria marthii FSL S4-120] Length = 330 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/192 (35%), Positives = 106/192 (55%), Gaps = 10/192 (5%) Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTE 385 Y+L+RE+ G DG + + RVN DLAN +GNL++R+V+MI K +DG IP G TE Sbjct: 1 YYLLREVPFGSDGLFTPEDFVDRVNYDLANDLGNLLNRTVAMINKYFDGEIPAYQGNVTE 60 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA- 444 D++++ + V++E +M + AL Q+ SLVS ++Y D PW L K RA Sbjct: 61 FDQTLVDFKNNVVKEYESSMDHMQFSVALNQLWSLVSRTNKYIDETAPWALAKDEDKRAE 120 Query: 445 -STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ-----RLKPGFM 498 ++V+ E +R +A+LLQ F+ + +IF L + +EN + D + G Sbjct: 121 LASVMTHLAETLRIIAVLLQPFLTRTPGEIFLQLGLQEEN--LKKWDSIYGYGEIPAGTT 178 Query: 499 LHKTFDPIFPRF 510 + K PIFPR Sbjct: 179 VVKKGTPIFPRL 190 >gi|169763032|ref|XP_001727416.1| methionyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40] gi|238488877|ref|XP_002375676.1| methionyl-tRNA synthetase [Aspergillus flavus NRRL3357] gi|83770444|dbj|BAE60577.1| unnamed protein product [Aspergillus oryzae] gi|220698064|gb|EED54404.1| methionyl-tRNA synthetase [Aspergillus flavus NRRL3357] Length = 625 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 118/517 (22%), Positives = 231/517 (44%), Gaps = 50/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + +++A+ Y N PH+G+ + ADV AR+ R G + L+ GTDE+G A Sbjct: 14 KRNFLVTSALPYVNNVPHLGNLIGSTLSADVFARYGRGRGANTLYVCGTDEYGTTSEARA 73 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 +TTK D+ ++ +IS+D F RTT + + ++ K+ D G + + Sbjct: 74 IQENMTTKELCDKYYALHAEVYKWFNISFDIFGRTTTELQTKITQDIFLKLHDNGFLSEH 133 Query: 123 CYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHN-------------------------P 156 + Y +++ D + + +Y +A + P Sbjct: 134 VTTQLYCEEHKSFLADRFIQGECPHCKYIDAYGDQCDLCGQLLDPLDLIKPRCKLDGATP 193 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 V+ + + F +L Q ++ +++ ES + ++ S++ GL++ S++R Sbjct: 194 VK-RDTKHIFLKLDKLQPEIQAFFDESSAKGGWSQNGKDITSSWLTKGLQERSITRD-IK 251 Query: 216 WGIKIPDDPQY---IMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKD 266 WG ++P P Y ++Y W DA Y++ T Y D + K+W P D+ + IGKD Sbjct: 252 WGTQVPL-PGYEEKVIYSWFDACIGYVSITANYTDQWE----KWWRNPEDVELYQFIGKD 306 Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVD 323 + +H++ +P + K + + ++ ++G K SKS G V + D Sbjct: 307 NVAYHSVMFPGTEIGTREKWLKVHHLSTTEYLTYEGGKFSKSRGIGVFGDSAKKTGIPAD 366 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGA 382 RY+L+ D ++ D N L +GN VSR V + K+YD ++P A Sbjct: 367 VWRYYLLSHRPETGDSEFNWDLFISSNNNILLKNLGNFVSRVVKFVNSKNYDNIVPDYTA 426 Query: 383 FTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTN 440 +TE ++ + +L + + + I A+ V+++ + + + + +L + Sbjct: 427 YTEPAFDAWKEEVNELLTQYIQQLDAVKIRAAIDTVLTISQKGNLFLQSNSLDNKLAENE 486 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P + + V+ + + +I L+ LL ++P+ A I +IL Sbjct: 487 PAKCAAVIGLALNLIHLLSALLAPYMPETAASINEIL 523 >gi|156549927|ref|XP_001602511.1| PREDICTED: similar to ENSANGP00000010004 [Nasonia vitripennis] Length = 968 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 120/523 (22%), Positives = 224/523 (42%), Gaps = 48/523 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + + I++A+ Y N PH+G+ ++ AD+ AR+ R + L+ +GTDE+G Sbjct: 260 KGEKNVLITSALPYVNNVPHLGNIIGCVLSADIFARYCRQRNYNTLYISGTDEYGTATEA 319 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A +T + D+ D+ I +D F RTT + + ++ +I ++G I Sbjct: 320 KALEEKLTPQQICDKFFDIHNDIYRWFSIGFDYFGRTTTPEQTEIVQAMFLRIKEQGYIL 379 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME----------- 161 + E + D V Y+ A G + + V E Sbjct: 380 PKTVDQLLCEKCERFLADRFVEGTCPRCKYEDARGDQCDGCGHLVNATELINPRCKVCST 439 Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 +F L Q+ L + + E R +++ GLK ++R Sbjct: 440 KPVIKASTQFFLDLPKIQEGL-KQWATEAEGGWSSVARAVTKPWLRDGLKPRCITRD-LK 497 Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDN-------PDGSKAKFWPADLHVIGKD 266 WGI +P D + YVW DA YL+ T P+G + + KD Sbjct: 498 WGIPVPLDGYRDKVFYVWFDAPLGYLSITKKYTKEFEKWWKPNGVDVSLY----QFMAKD 553 Query: 267 ILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323 + FHAI +PA LL+A+ L + + + ++ ++ K SKS G + + + + D Sbjct: 554 NVPFHAIMFPATLLAADQGHTLVRHIMATEYLNYEDTKFSKSRGIGVFGTDARDTGIPAD 613 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 R++L D ++ L + N++L N +GN V+R++ K+++ IP Sbjct: 614 VWRFYLAYIRPETMDSNFNWVDLATKNNSELLNNLGNFVNRALMFAEKNFNSKIPE-MEL 672 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKTNPD 442 E D +L++ R L ++ + +L ++++ ++Y +Q+PW ++K + D Sbjct: 673 LEDDLHVLALVQRELTSYITLLEQARLRDSLRHILAISKHGNQYMQSQQPWVKVKGSEED 732 Query: 443 --RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 + +TV+ V + L+ LL F+P A ++ L + +N Sbjct: 733 KKKGATVIGVCCNLACLLSALLAPFMPNTARELRAQLGLPKQN 775 >gi|121702181|ref|XP_001269355.1| methionyl-tRNA synthetase [Aspergillus clavatus NRRL 1] gi|119397498|gb|EAW07929.1| methionyl-tRNA synthetase [Aspergillus clavatus NRRL 1] Length = 651 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 117/519 (22%), Positives = 228/519 (43%), Gaps = 53/519 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + I++A+ Y N PH+G+ ++ AD AR+H+ G L+ GTDE+G Sbjct: 11 KGERNILITSALPYVNNVPHLGNIVGSVLSADAFARYHKACGRQTLYICGTDEYGTATET 70 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A VT + + ++ +++ + +I +D F RT K+H + + ++K++ D G + Sbjct: 71 KALEEKVTPEELCAKYNKIHQEVYEWFEIGFDHFGRTPTKQHTEISQAIFKRLYDNGYLT 130 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEEE 163 + Y ++ D V Y+ A G Q H P ++ Sbjct: 131 EKTAEQPYCETHGSFLADRYVEGECPRCHYEDARGDQCDKCGHLLDPFDLIKPRCKLDGA 190 Query: 164 GYFFRLSAYQDKLLSYYESHPE-FILPI--------ERRNEVISFVKSGLKDLSLSRKTF 214 R + + LL + E ++LP R+ +++K GLKD ++R Sbjct: 191 TPVRRPTKHIHLLLDKLQPEIEKWVLPAMEEGNWPKNSRDITKAWLKEGLKDRGITRD-L 249 Query: 215 DWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKD 266 WG+ +P P + ++YVW +A Y + T N ++W P ++ + +GKD Sbjct: 250 KWGVPVPL-PGFENKVLYVWFEACIGYPSITA---NYTSEWEQWWRNPEEVQLYQFLGKD 305 Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVD 323 + FH++ +P L + + + ++ ++G K SKS G V V D Sbjct: 306 NVPFHSVIFPGCELGTKDKWTMLHHLSTAEYLNYEGGKFSKSRGIGVFGNNAKQTGVPPD 365 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TP 380 RY+L++ D ++ N++L +GNLV+R V ++ Y+ +IP P Sbjct: 366 VWRYYLLKNRPETGDTQFEWRAFVDCNNSELLAKLGNLVNRVVKLVAASYNSIIPEFTVP 425 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRA--LAQVISLVSEVDRYFDAQKPWELKK 438 +F + + I S + ++E+ + ++ A LA+ + + + +R + L Sbjct: 426 ESFQPNLDEITSTLRQYIEEMEDVHLRAGVNTAMRLAEAGNGLIQANRLDNT-----LIA 480 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P+ A+ V+ + +I L+ + ++P + I + L Sbjct: 481 NEPEHAAAVVGTVMNLIYLLSSVFAPYLPATSKSILEQL 519 >gi|238882844|gb|EEQ46482.1| methionyl-tRNA synthetase [Candida albicans WO-1] Length = 748 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 114/517 (22%), Positives = 226/517 (43%), Gaps = 44/517 (8%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + + I++A+ Y N PH+G+ ++ AD+ +R+ + + LF GTDE+G Sbjct: 185 DERNILITSALPYVNNVPHLGNIIGSVLSADIYSRYAKNRNYNTLFICGTDEYGTATETK 244 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A VT + D+ +++ D DI +D F RTT + + ++ K+ +KG + + Sbjct: 245 ALEEKVTPQQLCDKYHAIHKEVYDWFDIGFDYFGRTTTSLQTEIAQDIFLKLHNKGYLEE 304 Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN---PVQWM---------- 160 Y +++ D V Y+ A G + N P++ + Sbjct: 305 KTTEQLYCEHHKSFLADRFVEGTCPKCDYEDARGDQCDKCGNLLDPLELINPRCKVDGNT 364 Query: 161 ----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 E + +L+ ++ L + +S + +N S++K GL+ ++R Sbjct: 365 PVVKESTHIYLKLNDLEEPLKEWVLDSSAKGAWSRNSKNITDSWIKRGLEPRCITRDLI- 423 Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTG--YLDNPDGSKAKFWPADLHV-----IGKD 266 WG +P ++YVW DA Y++ T + D+ K+W +V +GKD Sbjct: 424 WGTPVPLKGYDNKVLYVWFDATIGYVSITANYFKDSNTDDYLKWWKNPENVDLYQFMGKD 483 Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD- 323 + FH + +PA + K + + ++ ++ K SKS G + +E GV Sbjct: 484 NVPFHTVVFPASQIGTGDKWTKLHHLSTTEYLQYENGKFSKSRGVGVFGNNA-KETGVSP 542 Query: 324 -ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 RY+L +D + D + N++L +GN V+R V ++ Y+G+IP Sbjct: 543 SVWRYYLASNRPETQDAHFSWDEFVAKNNSELLANLGNFVNRIVKFVIAKYNGVIPKFDT 602 Query: 383 FTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTN 440 D + + + +L +NM+N + + L +++ S +++ D + L Sbjct: 603 KNIPDYDKFETDINSLLASYIDNMENVNLRKGLELAMAISSRGNQFLQDNKLDNSLYANQ 662 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P ++ V+ V + ++ ++ ++ F+P+ KI IL Sbjct: 663 PAKSDAVVAVAINLVYLVSAIIYPFMPETTVKIDQIL 699 >gi|302498134|ref|XP_003011065.1| hypothetical protein ARB_02587 [Arthroderma benhamiae CBS 112371] gi|291174613|gb|EFE30425.1| hypothetical protein ARB_02587 [Arthroderma benhamiae CBS 112371] Length = 650 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 121/518 (23%), Positives = 226/518 (43%), Gaps = 53/518 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV +R+++ G L+ GTDE+G A Sbjct: 13 KRNILITSALPYVNNVPHLGNIVGSVLSADVFSRYNKACGRPTLYVCGTDEYGTATETKA 72 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GVT + + ++ +++ +I +D F RT K H + + ++K++ + G + + Sbjct: 73 LEEGVTPEELCSKYNKIHQEVYSWFNIGFDIFGRTPTKAHTEISQSIFKRLYEHGYLEEK 132 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH-----------------NP 156 + + +++ D V Y A G Q QH P Sbjct: 133 TTEQPFCEKHDSFLADRFVEGECPRCHYDDARGDQCDKCQHLLDPFDLINPRCKVDGATP 192 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE-FILPIERRNEVISFVKSGLKDLSLSRKTFD 215 ++ + + F L Q ++ ++ + E P R S++K GL+ ++R Sbjct: 193 IR-RKTKHIFLLLDKLQPEIENWVATAFEKGDWPKNSRVITGSWLKEGLQPRGITRD-LK 250 Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDIL 268 WG+ +P D + ++YVW +A Y + T N K+W P D+ + +GKD + Sbjct: 251 WGVPVPLDGFERKVLYVWFEACIGYPSITA---NYTSEWEKWWRNPEDVQLYQFLGKDNV 307 Query: 269 RFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325 FHA+ +P L + + + ++ ++G K SKS G + E V D Sbjct: 308 PFHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGNNAKETGVSSDVW 367 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAF 383 RY+L++ D ++ N +L +GNLV+R V ++ K Y +IP F Sbjct: 368 RYYLLKNRPETGDTQFEWKSFIDSNNGELLAKLGNLVNRVVKLVASPKAYSSVIP---EF 424 Query: 384 TESDE---SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKT 439 T S+ ++ V S + Q I E M+ + + + + + A K L Sbjct: 425 TVSEPFYPALEEVTSLLRQYINE-MEGVHLRAGIVTAMKIAEAGNGLIQANKLDNSLIAN 483 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P+RA+ V+ + V +I + + ++P + I D L Sbjct: 484 EPERAAAVVGIVVNLIHLCSSVFCPYLPATSASILDQL 521 >gi|68467731|ref|XP_722024.1| potential cytoplasmic methionyl tRNA synthetase [Candida albicans SC5314] gi|68468050|ref|XP_721864.1| potential cytoplasmic methionyl tRNA synthetase [Candida albicans SC5314] gi|46443806|gb|EAL03085.1| potential cytoplasmic methionyl tRNA synthetase [Candida albicans SC5314] gi|46443971|gb|EAL03249.1| potential cytoplasmic methionyl tRNA synthetase [Candida albicans SC5314] Length = 748 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 114/517 (22%), Positives = 226/517 (43%), Gaps = 44/517 (8%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + + I++A+ Y N PH+G+ ++ AD+ +R+ + + LF GTDE+G Sbjct: 185 DERNILITSALPYVNNVPHLGNIIGSVLSADIYSRYAKNRNYNTLFICGTDEYGTATETK 244 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A VT + D+ +++ D DI +D F RTT + + ++ K+ +KG + + Sbjct: 245 ALEEKVTPQQLCDKYHAIHKEVYDWFDIGFDYFGRTTTSLQTEIAQDIFLKLHNKGYLEE 304 Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN---PVQWM---------- 160 Y +++ D V Y+ A G + N P++ + Sbjct: 305 KTTEQLYCEHHKSFLADRFVEGTCPKCDYEDARGDQCDKCGNLLDPLELINPRCKVDGNT 364 Query: 161 ----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 E + +L+ ++ L + +S + +N S++K GL+ ++R Sbjct: 365 PVVKESTHIYLKLNDLEEPLKEWVLDSSAKGAWSRNSKNITDSWIKRGLEPRCITRDLI- 423 Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTG--YLDNPDGSKAKFWPADLHV-----IGKD 266 WG +P ++YVW DA Y++ T + D+ K+W +V +GKD Sbjct: 424 WGTPVPLKGYDNKVLYVWFDATIGYVSITANYFKDSNTDDYLKWWKNPENVDLYQFMGKD 483 Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD- 323 + FH + +PA + K + + ++ ++ K SKS G + +E GV Sbjct: 484 NVPFHTVVFPASQIGTGDKWTKLHHLSTTEYLQYENGKFSKSRGVGVFGNNA-KETGVSP 542 Query: 324 -ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 RY+L +D + D + N++L +GN V+R V ++ Y+G+IP Sbjct: 543 SVWRYYLASNRPETQDAHFSWDEFVAKNNSELLANLGNFVNRIVKFVIAKYNGVIPKFDT 602 Query: 383 FTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTN 440 D + + + +L +NM+N + + L +++ S +++ D + L Sbjct: 603 KNIPDYDKFENDINSLLASYIDNMENVNLRKGLELAMAISSRGNQFLQDNKLDNSLYANQ 662 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P ++ V+ V + ++ ++ ++ F+P+ KI IL Sbjct: 663 PAKSDAVVAVAINLVYLVSAIIYPFMPETTVKIDQIL 699 >gi|170577156|ref|XP_001893903.1| methionyl-tRNA synthetase [Brugia malayi] gi|158599817|gb|EDP37273.1| methionyl-tRNA synthetase, putative [Brugia malayi] Length = 940 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 127/529 (24%), Positives = 232/529 (43%), Gaps = 62/529 (11%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + + I++A+ Y N PH+G+ ++ ADV +R+ L G LF GTDE+G A Sbjct: 29 KNILITSALPYVNNVPHLGNIVGCVLSADVFSRYCYLKGWRRLFICGTDEYGTATETKAI 88 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG- 122 G+T + D+ + +I +D F RTT + + + ++ K+ G Sbjct: 89 QEGLTPRQICDKYHAIHAKIYKWFNIDFDHFGRTTTQHQTELTQEIFLKLHKNGFTSTDT 148 Query: 123 -----CYSGWYSLRDE--------AYYNDDEVYKG-ADGQYYNAQH--NPVQWMEEEGYF 166 C S L D +++D + A G+ NA NP + + Sbjct: 149 VDQLHCDSCSRFLADRFVCGECPHCHFDDARGDQCDACGKLINAVELINPRCHLCKATPI 208 Query: 167 FRLSAY----QDKLLSYYESHPEFILPIERRN---EVISFVKS----GLKDLSLSRKTFD 215 + S + DKL E H L + + IS KS GL+ ++R Sbjct: 209 VKPSNHIFLHLDKLADKVEKHLNEQLNLGKNQWSPNAISIAKSWLKGGLEKRCITRD-LK 267 Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA--DLH-VIGK----- 265 WG+ +P + + YVW DA YL+ T D S+ P+ DL+ +GK Sbjct: 268 WGVSVPLESFSNKVFYVWFDAPIGYLSITKEYLGEDWSQWWKNPSIVDLYNFVGKVAYFF 327 Query: 266 ----DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISK-SLGNVIDPIE--- 315 D + FHA+ +PA + N + ++ + ++ ++ K SK + D + Sbjct: 328 VPFHDNVAFHAVMFPATQIGTGDNYTVVNRLCATEYLNYESMKFSKHGFAFLFDIFQSRG 387 Query: 316 ------VIEEVGVDA--LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 + E G+DA R++L+ +D + D +VN +L N +GN V+R++ Sbjct: 388 TGVFGDMAAETGIDADIWRFYLLYIRPETQDTSFSWDDFSLKVNTELLNNLGNFVNRALI 447 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 + K +DG++P E D+++L+ S L + + + + + +V+S+ + Y Sbjct: 448 FLSKYFDGVVPD-MHLQEQDKALLAQVSSDLSDFDLCLSSVKLRDGIVKVLSISRHGNLY 506 Query: 428 FDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + +PW L K + + RA TV+ + + +A++L ++P ++ KI Sbjct: 507 IQSTQPWVLIKGSENDRKRAGTVIGIVANLAYLIAVMLYPYMPSISAKI 555 >gi|302667056|ref|XP_003025122.1| hypothetical protein TRV_00701 [Trichophyton verrucosum HKI 0517] gi|291189205|gb|EFE44511.1| hypothetical protein TRV_00701 [Trichophyton verrucosum HKI 0517] Length = 650 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 123/517 (23%), Positives = 224/517 (43%), Gaps = 51/517 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV +R+++ G L+ GTDE+G A Sbjct: 13 KRNILITSALPYVNNVPHLGNIVGSVLSADVFSRYNKACGRPTLYVCGTDEYGTATETKA 72 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GVT + + ++ +++ +I +D F RT K H + + ++K++ + G + + Sbjct: 73 LEEGVTPEELCSKYNKIHQEVYSWFNIGFDIFGRTPTKAHTEISQSIFKRLYEHGYLEEK 132 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEEEGY 165 + + +++ D V Y A G Q QH NP ++ Sbjct: 133 TTEQPFCEKHDSFLADRFVEGECPRCHYDDARGDQCDKCQHLLDPFDLINPRCKVDGATP 192 Query: 166 FFRLSAY----QDKLLSYYESHPEFIL-----PIERRNEVISFVKSGLKDLSLSRKTFDW 216 R + + DKL E+ P R S++K GL+ ++R W Sbjct: 193 IRRKTKHIFLLLDKLQPDIENWAATAFEKGDWPKNSRVITGSWLKEGLQPRGITRD-LKW 251 Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDILR 269 G+ +P D + ++YVW +A Y + T N K+W P D+ + +GKD + Sbjct: 252 GVPVPLDGFERKVLYVWFEACIGYPSITA---NYTSEWEKWWRNPEDVQLYQFLGKDNVP 308 Query: 270 FHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326 FHA+ +P L + + + ++ ++G K SKS G + E V D R Sbjct: 309 FHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGNNAKETGVSSDVWR 368 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAFT 384 Y+L++ D ++ N +L +GNLV+R V ++ K Y +IP FT Sbjct: 369 YYLLKNRPETGDTQFEWKSFIDSNNGELLAKLGNLVNRVVKLVASPKAYSSVIP---EFT 425 Query: 385 ESDE---SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTN 440 S+ ++ V S + Q I E M+ + + + + + A K L Sbjct: 426 VSEPFYPALEEVTSLLRQYINE-MEGVHLRAGIVTAMKIAEAGNGLIQANKLDNSLIANE 484 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P+RA+ V+ + V +I + + ++P + I D L Sbjct: 485 PERAAAVVGIVVNLIHLCSSVFCPYLPATSASILDQL 521 >gi|50287813|ref|XP_446336.1| hypothetical protein [Candida glabrata CBS 138] gi|49525643|emb|CAG59260.1| unnamed protein product [Candida glabrata] Length = 750 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 117/516 (22%), Positives = 223/516 (43%), Gaps = 44/516 (8%) Query: 2 KEREK-LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 KE E+ + I++A+ Y N PH+G+ ++ AD+ AR+ + + LF GTDE+G Sbjct: 191 KEGERNILITSALPYVNNVPHLGNIVGSVLSADIFARYCKSRNYNTLFICGTDEYGTATE 250 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A GV+ + D+ + D+ I +D F RTT ++ + + ++ K+ G + Sbjct: 251 TKAIEEGVSPRELCDKYHKIHSDVYKWFQIGFDYFGRTTTEQQTEIAQDIFLKLDKNGYL 310 Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---------NPVQWME- 161 + Y ++ D V Y+ A G + NP ++ Sbjct: 311 GEESMKQLYCPVHNSFLADRYVEGECPKCHYEDARGDQCDKCGGLLDPFELINPRCKLDN 370 Query: 162 -------EEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + F L + ++ + E + E + S++K GLK ++R Sbjct: 371 AIPEPKTSDHIFLALDKLEPEIKKWVEKASTEGEWSKNSKTITNSWLKDGLKPRCITRDL 430 Query: 214 FDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKD 266 WG +P + ++YVW DA Y++ T N + ++W P D+ + +GKD Sbjct: 431 V-WGTPVPLEKYKDKVLYVWFDATIGYVSITA---NYTKNWEQWWKKPEDVKLYQFMGKD 486 Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVD 323 + FH + +P L N + + + ++ ++G K SKS G V + Sbjct: 487 NVPFHTVVFPGSQLGTNDEWTMLHHLNTTEYLQYEGGKFSKSRGVGVFGNNAQDSGISPS 546 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 RY+L D + D R N++L +GN V+R + + Y+G+IP Sbjct: 547 VWRYYLASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRIIKFVNAKYNGVIPKFDTK 606 Query: 384 TESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNP 441 + +S++S + +L+ + M+ R L +SL + +++ K L +P Sbjct: 607 NLPNYDSLVSDINEILRNYVKEMETAHERRGLEIAMSLSARGNQFLQENKLDNSLFSQHP 666 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +++ V+ V + ++ +A L+ F+P+ A I +L Sbjct: 667 EKSDAVVGVGLNIVYAVASLIYPFMPETAETINRML 702 >gi|3924|emb|CAA24627.1| tRNA synthetase [Saccharomyces cerevisiae] gi|151943538|gb|EDN61849.1| methionyl-tRNA synthetase [Saccharomyces cerevisiae YJM789] gi|323308896|gb|EGA62129.1| Mes1p [Saccharomyces cerevisiae FostersO] Length = 751 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 112/511 (21%), Positives = 214/511 (41%), Gaps = 45/511 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD+ AR+ + + LF GTDE+G A Sbjct: 198 ILITSALPYVNNVPHLGNIIGSVLSADIFARYCKGRNYNALFICGTDEYGTATETKALEE 257 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT + D+ + D+ I +D F RTT + + + ++ K++ G + + Sbjct: 258 GVTPRQLCDKYHKIHSDVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNGYLEEQSMK 317 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYN-----------AQHNPVQWME----------EEG 164 Y +Y D V +Y+ A +P + + E Sbjct: 318 QLYCPVHNSYLADRYVEGECPKCHYDDARGDQCDKCGALLDPFELINPRCKLDDASPEPK 377 Query: 165 Y----FFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 Y F L + ++ + E + E + S++K GLK ++R WG Sbjct: 378 YSDHIFLSLDKLESQISEWVEKASEEGNWSKNSKTITQSWLKDGLKPRCITRDLV-WGTP 436 Query: 220 IPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHA 272 +P + ++YVW DA Y++ T N ++W HV +GKD + FH Sbjct: 437 VPLEKYKDKVLYVWFDATIGYVSITS---NYTKEWKQWWNNPEHVSLYQFMGKDNVPFHT 493 Query: 273 IYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFL 329 + +P L N + + + ++ ++ K SKS G V + RY+L Sbjct: 494 VVFPGSQLGTEENWTMLHHLNTTEYLQYENGKFSKSRGVGVFGNNAQDSGISPSVWRYYL 553 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESD 387 D + D R N++L +GN V+R + + Y+G++P P + D Sbjct: 554 ASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRLIKFVNAKYNGVVPKFDPKKVSNYD 613 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRAST 446 ++ + +L + M+ R L +SL + +++ K L +P+++ Sbjct: 614 -GLVKDINEILSNYVKEMELGHERRGLEIAMSLSARGNQFLQENKLDNTLFSQSPEKSDA 672 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V+ V + +I ++ ++ ++P++ KI +L Sbjct: 673 VVAVGLNIIYAVSSIITPYMPEIGEKINKML 703 >gi|323348501|gb|EGA82746.1| Mes1p [Saccharomyces cerevisiae Lalvin QA23] Length = 751 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 112/511 (21%), Positives = 214/511 (41%), Gaps = 45/511 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD+ AR+ + + LF GTDE+G A Sbjct: 198 ILITSALPYVNNVPHLGNIIGSVLSADIFARYCKGRNYNALFICGTDEYGTATETKALEE 257 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT + D+ + D+ I +D F RTT + + + ++ K++ G + + Sbjct: 258 GVTPRQLCDKYHKIHSDVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNGYLEEQSMK 317 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYN-----------AQHNPVQWME----------EEG 164 Y +Y D V +Y+ A +P + + E Sbjct: 318 QLYCPVHNSYLADRYVEGECPKCHYDDARGDQCDKCGALLDPFELINPRCKLDDASPEPK 377 Query: 165 Y----FFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 Y F L + ++ + E + E + S++K GLK ++R WG Sbjct: 378 YSDHIFLSLDKLESQISEWVEKASEEGNWSKNSKTITQSWLKDGLKPRCITRDLV-WGTP 436 Query: 220 IPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHA 272 +P + ++YVW DA Y++ T N ++W HV +GKD + FH Sbjct: 437 VPLEKYKDKVLYVWFDATIGYVSITS---NYTKEWKQWWNNPEHVSLYQFMGKDNVPFHT 493 Query: 273 IYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFL 329 + +P L N + + + ++ ++ K SKS G V + RY+L Sbjct: 494 VVFPGSQLGTEENWTMLHHLNTTEYLQYENGKFSKSRGVGVFGNNAQDSGISPSVWRYYL 553 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESD 387 D + D R N++L +GN V+R + + Y+G++P P + D Sbjct: 554 ASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRLIKFVNAKYNGVVPKFDPKKVSNYD 613 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRAST 446 ++ + +L + M+ R L +SL + +++ K L +P+++ Sbjct: 614 -GLVKDINEILSNYVKEMELGHERRGLEIAMSLSARGNQFLQENKLDNTLFSQSPEKSDA 672 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V+ V + +I ++ ++ ++P++ KI +L Sbjct: 673 VVAVGLNIIYAVSSIITPYMPEIGEKINKML 703 >gi|6321704|ref|NP_011780.1| Mes1p [Saccharomyces cerevisiae S288c] gi|1711639|sp|P00958|SYMC_YEAST RecName: Full=Methionyl-tRNA synthetase, cytoplasmic; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|1323481|emb|CAA97293.1| MES1 [Saccharomyces cerevisiae] gi|1536956|emb|CAA69086.1| methionine--tRNA ligase [Saccharomyces cerevisiae] gi|190406732|gb|EDV09999.1| methionine-tRNA ligase [Saccharomyces cerevisiae RM11-1a] gi|259146765|emb|CAY80022.1| Mes1p [Saccharomyces cerevisiae EC1118] gi|285812454|tpg|DAA08354.1| TPA: Mes1p [Saccharomyces cerevisiae S288c] Length = 751 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 112/511 (21%), Positives = 214/511 (41%), Gaps = 45/511 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD+ AR+ + + LF GTDE+G A Sbjct: 198 ILITSALPYVNNVPHLGNIIGSVLSADIFARYCKGRNYNALFICGTDEYGTATETKALEE 257 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT + D+ + D+ I +D F RTT + + + ++ K++ G + + Sbjct: 258 GVTPRQLCDKYHKIHSDVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNGYLEEQSMK 317 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYN-----------AQHNPVQWME----------EEG 164 Y +Y D V +Y+ A +P + + E Sbjct: 318 QLYCPVHNSYLADRYVEGECPKCHYDDARGDQCDKCGALLDPFELINPRCKLDDASPEPK 377 Query: 165 Y----FFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 Y F L + ++ + E + E + S++K GLK ++R WG Sbjct: 378 YSDHIFLSLDKLESQISEWVEKASEEGNWSKNSKTITQSWLKDGLKPRCITRDLV-WGTP 436 Query: 220 IPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHA 272 +P + ++YVW DA Y++ T N ++W HV +GKD + FH Sbjct: 437 VPLEKYKDKVLYVWFDATIGYVSITS---NYTKEWKQWWNNPEHVSLYQFMGKDNVPFHT 493 Query: 273 IYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFL 329 + +P L N + + + ++ ++ K SKS G V + RY+L Sbjct: 494 VVFPGSQLGTEENWTMLHHLNTTEYLQYENGKFSKSRGVGVFGNNAQDSGISPSVWRYYL 553 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESD 387 D + D R N++L +GN V+R + + Y+G++P P + D Sbjct: 554 ASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRLIKFVNAKYNGVVPKFDPKKVSNYD 613 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRAST 446 ++ + +L + M+ R L +SL + +++ K L +P+++ Sbjct: 614 -GLVKDINEILSNYVKEMELGHERRGLEIAMSLSARGNQFLQENKLDNTLFSQSPEKSDA 672 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V+ V + +I ++ ++ ++P++ KI +L Sbjct: 673 VVAVGLNIIYAVSSIITPYMPEIGEKINKML 703 >gi|256272650|gb|EEU07627.1| Mes1p [Saccharomyces cerevisiae JAY291] Length = 751 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 112/511 (21%), Positives = 214/511 (41%), Gaps = 45/511 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD+ AR+ + + LF GTDE+G A Sbjct: 198 ILITSALPYVNNVPHLGNIIGSVLSADIFARYCKGRNYNALFICGTDEYGTATETKALEE 257 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT + D+ + D+ I +D F RTT + + + ++ K++ G + + Sbjct: 258 GVTPRQLCDKYHKIHSDVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNGYLEEQSMK 317 Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYN-----------AQHNPVQWME----------EEG 164 Y +Y D V +Y+ A +P + + E Sbjct: 318 QLYCPVHNSYLADRYVEGECPKCHYDDARGDQCDKCGALLDPFELINPRCKLDDASPEPK 377 Query: 165 Y----FFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 Y F L + ++ + E + E + S++K GLK ++R WG Sbjct: 378 YSDHIFLSLDKLESQISEWVEKASEEGNWSKNSKTITQSWLKDGLKPRCITRDLV-WGTP 436 Query: 220 IPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHA 272 +P + ++YVW DA Y++ T N ++W HV +GKD + FH Sbjct: 437 VPLEKYKDKVLYVWFDATIGYVSITS---NYTKEWKQWWNNPEHVSLYQFMGKDNVPFHT 493 Query: 273 IYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFL 329 + +P L N + + + ++ ++ K SKS G V + RY+L Sbjct: 494 VVFPGSQLGTEENWTMLHHLNTTEYLQYENGKFSKSRGVGVFGNNAQDSGISPSVWRYYL 553 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESD 387 D + D R N++L +GN V+R + + Y+G++P P + D Sbjct: 554 ASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRLIKFVNAKYNGVVPKFDPKKVSNYD 613 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRAST 446 ++ + +L + M+ R L +SL + +++ K L +P+++ Sbjct: 614 -GLVKDINEILSNYVKEMELGHERRGLEIAMSLSARGNQFLQENKLDNTLFSQSPEKSDA 672 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V+ V + +I ++ ++ ++P++ KI +L Sbjct: 673 VVAVGLNIIYAVSSIITPYMPEIGEKINKML 703 >gi|330790515|ref|XP_003283342.1| methionyl-tRNA synthetase [Dictyostelium purpureum] gi|325086767|gb|EGC40152.1| methionyl-tRNA synthetase [Dictyostelium purpureum] Length = 720 Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 123/550 (22%), Positives = 224/550 (40%), Gaps = 73/550 (13%) Query: 7 LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ + ADV AR+ RL +V++ GTDE+G A Sbjct: 18 ILITSALPYVNNVPHLGNLVGSTLSADVYARYCRLKNYNVIYIWGTDEYGTATETKALQE 77 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 T K D+ + +++ + +IS+D F ++KK++D G Sbjct: 78 KCTPKEICDKYHKIHKEIYEWFNISFDKF-------------DIFKKLNDNGYTLTQEIE 124 Query: 126 GWYSLRDEAYYNDDEVYKG--ADGQYYNAQH----------NPVQWMEEEGYFFRLSAYQ 173 Y + + D +G QY +A+ NP + R Sbjct: 125 QLYCEQTCKMFLADRYVEGICPHCQYEDARGDQCDKCTKLLNPTDLINP-----RCKMCS 179 Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-------------------- 213 + H LP + ++ V FVK D + S + Sbjct: 180 KPPIIKSTKHIFIDLP-QLQSSVQEFVKRNSADGNWSENSIQITKTWVDGELKPRCITRD 238 Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVI---GKD 266 WG +P + + + YVW DA Y++ T K+W P D+ ++ GKD Sbjct: 239 LKWGTPVPLEEFKEKVFYVWFDAPIGYISITAEYTK---DWEKWWKNPEDVKLVQFMGKD 295 Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV-- 322 + FH + +PA + + L + + ++ ++ K SKS G + + + G+ Sbjct: 296 NVPFHTVIFPASQIGTKDSYTLLNNLSTTEYLNYETGKFSKSRGTGVFG-DGAKNTGIPS 354 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--P 380 + R++L+ D + D + N +L N GNLV+R + MI Y G +PT Sbjct: 355 EVWRFYLLSNRPESSDSVFSWDDFNAK-NNELLNNFGNLVNRVLKMISTTYQGTVPTIDN 413 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 E+D ++ ++ L + ++++ + L +++ + Y KPWE K Sbjct: 414 TKLNEADHKFINEVNQNLDQYFKSLEEISLKEGLKITMAISKLGNSYMQENKPWEGDK-- 471 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500 +R++ VL V +I+ LA L + ++P L ++I L V + + G L Sbjct: 472 -ERSALVLAVLTNLIKLLATLFEPYIPSLTDRIHQQLNVEPTKYSTKFDLHAIPGGHELS 530 Query: 501 KTFDPIFPRF 510 K +P+ + Sbjct: 531 KQIEPLVKKI 540 >gi|321258022|ref|XP_003193784.1| methionyl-tRNA synthetase; Mes1p [Cryptococcus gattii WM276] gi|317460254|gb|ADV21997.1| Methionyl-tRNA synthetase, putative; Mes1p [Cryptococcus gattii WM276] Length = 724 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 131/576 (22%), Positives = 236/576 (40%), Gaps = 99/576 (17%) Query: 4 REKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ + ADV AR++R + L+ GTDE+G A Sbjct: 30 QRNVLITSALPYVNNVPHLGNIIGSTLSADVFARYNRTLNVPTLYICGTDEYGTATETKA 89 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GVT + + ++ + IS+D + RT+ H + + ++K++ D G +++ Sbjct: 90 LEEGVTPYELCTKFHKLHTEIYEWFQISFDKWGRTSTPEHTEITQGIYKRLHDNG-LFR- 147 Query: 123 CYSGWYSLRDEAYYNDDEVY---KGADGQYYNAQHN----------------PVQWMEEE 163 D+ Y DDE++ + +G N ++ P Q + Sbjct: 148 -----LETSDQTYCEDDELFLADRFVEGTCPNCGYDDARGDQCDKCALTFSSPTQLINPR 202 Query: 164 G---------------YFFRLSAYQDKLLSYYESHP-----EFILPIERRNEVIS--FVK 201 +RL Q +L+ + + I + E++ + Sbjct: 203 CKRNKAHTLSVRPSTHACYRLDLLQPRLVEWMQDARVKGKWGTNAVITDKGEIVEPRMLG 262 Query: 202 SGLKDLSLSRKTFDWGIKIP---DDPQ------YIMYVWIDALTNYLTTTG-YLDNPDGS 251 GL+ +++R WG+++P D+ + ++YVW DA Y + T Y D + Sbjct: 263 EGLRPSAVTRD-LKWGVEVPKVGDEEEDKAMEGKVIYVWFDAPIGYPSITATYTDKWE-- 319 Query: 252 KAKFW--PADLHV---IGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKIS 304 K+W P ++ + +GKD + FH + +PA LL P + + S ++ ++ K S Sbjct: 320 --KWWKNPDNVELYQFMGKDNVYFHTVLFPATLLGTKEPWTMLHTISSTQYLNYEDTKFS 377 Query: 305 KS-----LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 KS GN EV RY+L+ + D + N +L +G Sbjct: 378 KSRNIGVFGNNARETGQPPEV----WRYYLLSQRPENSDSSFLWSKFIAANNNELLANLG 433 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFT---------ESDESILSVCSRVLQEIRENMQNQLI 410 N V+R V I D +P P F SD ++ + L+E RE M + + Sbjct: 434 NFVNRVVKFINAKLDSKVPGPEGFAGGEVVPPSDSSDFDFVTDVNTRLKEYREQMDDTKL 493 Query: 411 HRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 LA ++L + ++Y L + P+R + VL V +I L+++ F+P Sbjct: 494 RGGLATAMALSARGNQYLQENSLDNALLASKPERCAEVLLNAVNLIYILSVVFHPFMPNT 553 Query: 470 ANKIFDILFVADENRCFQSLDQRLK----PGFMLHK 501 + I L N +SL + PG +L K Sbjct: 554 SEGILRQL-----NAPARSLPTKFSIDILPGHVLGK 584 >gi|50302967|ref|XP_451421.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640552|emb|CAH03009.1| KLLA0A09647p [Kluyveromyces lactis] Length = 777 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 122/549 (22%), Positives = 236/549 (42%), Gaps = 63/549 (11%) Query: 2 KEREK-LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 KE E+ + I++A+ Y N PH+G+ ++ AD+ +RF + + L+ GTDE+G Sbjct: 218 KEGERNILITSALPYVNNVPHLGNIVGSVLSADIYSRFAKGRNYNALYICGTDEYGTATE 277 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A GVT + D+ + D+ I +D F RTT ++ + ++ K+ D+G + Sbjct: 278 TKALEDGVTPRELCDKYHKVHSDVYKWFQIGFDYFGRTTTEKQTAIAQDIFMKLYDRGFL 337 Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYN---AQHNPVQWME------- 161 + Y + Y D V Y+ A G + A NP + ++ Sbjct: 338 EEQTMKQLYCPAHKGYLADRYVEGTCPKCGYEDARGDQCDKCGALLNPFELIDPRCKLDD 397 Query: 162 -------EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 + F L + ++ + E+ + + S++K GL ++R Sbjct: 398 GVPEPRDSDHIFMSLDKLEPEIKKWVDEASSKGNWSKNSKTITQSWLKEGLHPRCITRDL 457 Query: 214 FDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADL---HVIGKD 266 WG +P + + ++YVW DA Y++ T N ++W P ++ +GKD Sbjct: 458 V-WGTPVPLENYKEKVLYVWFDACIGYVSITANYTN---KWEQWWKNPNNIDLYQFMGKD 513 Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEE 319 + FH + +P L + + + + ++ ++G K SKS GN I + Sbjct: 514 NVPFHTVIFPGSQLGTGDDWTMLHHLNTTEYLQYEGGKFSKSRSIGVFGNNAQEIGLSPS 573 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP- 378 V RY+L+ D + R N++L +GN V+R V + Y+G++P Sbjct: 574 V----WRYYLISVRPETSDSQFSWSDFAARNNSELLANLGNFVNRVVKFVNAKYNGVVPD 629 Query: 379 -----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQK 432 PG + + + I +L +NM+ + R L ++L + +++ D + Sbjct: 630 FNVDNLPG-YAQLKKDI----DEILTNYVDNMEKVHLRRGLEIAMTLSARGNQFLQDNKL 684 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492 L P ++ V+ V + +I +A ++ F+P+ + I+ +L A R + Sbjct: 685 DNSLFAQEPAKSDAVVGVALNIIYTVASIMSPFIPETSEIIYRML-NAPALRIDDHFNLP 743 Query: 493 LKPGFMLHK 501 ++PG ++K Sbjct: 744 IRPGHNINK 752 >gi|291236811|ref|XP_002738331.1| PREDICTED: Methionyl-tRNA synthetase, mitochondrial-like [Saccoglossus kowalevskii] Length = 1208 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 113/222 (50%), Gaps = 19/222 (8%) Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-----GQYYNAQHNP 156 + D+ + K+ G IY+G Y GWYS+ DEA+ D +V D + + N Sbjct: 58 NSDSNLVELNKLVANGYIYEGKYCGWYSISDEAFITDKQVQDVTDKHGNVTKVSSETGNL 117 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--F 214 V+W EE+ Y FRLS + ++ + +P I P + + ++ GL DLS+SR+ Sbjct: 118 VEWTEEKNYVFRLSEFGPRIQRWLADNPNVIKPAKFTKVLHHWLNDGLPDLSVSRQRSRL 177 Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274 WGI + +D +YVW+DAL NYLT +GY K+ WPA +H++GKDIL+ +I Sbjct: 178 KWGIPVANDNTQTIYVWLDALVNYLTVSGYPH-----KSYRWPA-VHLVGKDILKG-SIA 230 Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316 P N+ P++ + KG +S G+ P E Sbjct: 231 SPE---EGNVASPEEGIV--ALPEKGSDVSPEEGSDASPEEA 267 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 114/229 (49%), Gaps = 21/229 (9%) Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GN+++P+E +++ D LRYFL+RE DG Y D + + +NA+L + +GNL+ Sbjct: 978 MSKSKGNIVNPLEKVKDFTTDGLRYFLLREGVPHSDGDYYDDKVVECLNAELCDTLGNLL 1037 Query: 363 SRSVSMILKDYDGMIPTPGAF-----------TESDESILSVCSRVLQEIRENMQNQLIH 411 SR + L P T D +++ + + + + + N +H Sbjct: 1038 SRCTAKSLNPKQIFPPLDANLFPPVMKSGIKATRDDYNLIMKFTNLPECVHQYYINFEVH 1097 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469 +A+ +++S + E + + +PW L+K D+ +TVL++ +E +R ILLQ P L Sbjct: 1098 KAIKEIMSCLRETNAFIQRHEPWNLRKNAADQTWLNTVLHIAMETLRISGILLQPVAPNL 1157 Query: 470 ANKIFDILFVADENR------CFQSL--DQRLKPGFMLHKTFDPIFPRF 510 A+K+ L + + NR CF SL D L G L +F R Sbjct: 1158 ADKLLSRLGILNHNRTWSDLNCFSSLHADTCLNAGHSLGPDTGVLFTRI 1206 >gi|225678255|gb|EEH16539.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03] Length = 653 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 136/563 (24%), Positives = 244/563 (43%), Gaps = 66/563 (11%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLAR--FHRLDGLDVLFTTGTDEHGQKI 58 +K + + I++A+ Y N PH+G+ I+ VL+ + + G LF GTDE+G Sbjct: 10 VKGQRNILITSALPYVNNVPHLGN----IVGSVLSADVYQKACGRPTLFVCGTDEYGTAT 65 Query: 59 AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 A GVT + + ++ +D+ + +I +D F RT +H + ++K++ + G Sbjct: 66 ETKALEEGVTPEELCAKYNKIHQDVYEWFEIGFDIFGRTPTAQHTQISQNIFKRLHENGF 125 Query: 119 IYKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWME 161 + + + + +++ D V Y A G Q H NP ++ Sbjct: 126 LEEKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLD 185 Query: 162 EEGYFFRLSAYQDKLLSYYESH-PEFILP-IERRN-----EVI--SFVKSGLKDLSLSRK 212 R + + LL + E++ P IE+ N VI S++K GLKD ++R Sbjct: 186 GATPVRRPTKHIHLLLDKLQPEIEEWVHPAIEKGNWPKNSRVITESWLKEGLKDRGITRD 245 Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IG 264 WG+ +P D + ++YVW +A Y + T PD + W P ++ + +G Sbjct: 246 -LKWGVPVPLDGYEKKVLYVWFEACIGYPSITANY-TPD---WELWWRDPDNVQLYQFLG 300 Query: 265 KDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321 KD + FH++ +P + K + + ++ ++ K SKS G V + Sbjct: 301 KDNVPFHSVIFPGTQIGTRDKWTKLYHLSTTEYLNYENGKFSKSRGIGVFGNNAKDTGIP 360 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPT 379 D RY+L++ D ++ N +L +GNLV+R V +I K Y ++P Sbjct: 361 PDVWRYYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSVVPE 420 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKK 438 TE E L + +L++ M++ + L + +V + A K L Sbjct: 421 -FTVTEPFEPALEEITALLRQYISEMESVHLRAGLVTAMKIVEVGNGLIQANKLDNSLIA 479 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ------- 491 T P+RA+TV+ + V +I ++ + ++P + I L V N SLD+ Sbjct: 480 TEPERAATVVGIVVNLIYLISSIFSPYLPATSASILAQLNVPFRN--IPSLDELKEVGWR 537 Query: 492 --RLKPGFMLHKT---FDPIFPR 509 +KPG + K F I P+ Sbjct: 538 ADLIKPGHKIGKAKYLFSQIDPK 560 >gi|326474779|gb|EGD98788.1| methionyl-tRNA synthetase [Trichophyton tonsurans CBS 112818] gi|326484274|gb|EGE08284.1| methionyl-tRNA synthetase [Trichophyton equinum CBS 127.97] Length = 650 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 119/518 (22%), Positives = 226/518 (43%), Gaps = 53/518 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV +R+++ G L+ GTDE+G A Sbjct: 13 KRNILITSALPYVNNVPHLGNIVGSVLSADVFSRYNKACGRPTLYVCGTDEYGTATETKA 72 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GVT + + ++ +++ +I +D F RT K H + + ++K++ + G + + Sbjct: 73 LEEGVTPEGLCSKYNKIHQEVYSWFNIGFDIFGRTPTKAHTEISQSIFKRLYEHGYLEEK 132 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH-----------------NP 156 + + +++ D V Y A G Q QH P Sbjct: 133 TTEQPFCEKHDSFLADRFVEGECPRCHYDDARGDQCDKCQHLLDPFDLINPRCKVDGATP 192 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE-FILPIERRNEVISFVKSGLKDLSLSRKTFD 215 ++ + + F L Q ++ ++ + E P R S++K GL+ ++R Sbjct: 193 IR-RKTKHIFLLLDKLQPEIENWATAAFEKGDWPKNSRVITGSWLKEGLQPRGITRD-LK 250 Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDIL 268 WG+ +P D + ++YVW +A Y + T N K+W P ++ + +GKD + Sbjct: 251 WGVPVPLDGFERKVLYVWFEACIGYPSITA---NYTSEWEKWWRNPEEVQLYQFLGKDNV 307 Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325 FHA+ +P L + + + ++ ++G K SKS G + E V D Sbjct: 308 PFHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGNNAKETGVSSDVW 367 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAF 383 RY+L++ D ++ N +L +GNLV+R V ++ K Y +IP F Sbjct: 368 RYYLLKNRPETGDTQFEWKSFIDSNNGELLAKLGNLVNRVVKLVASPKAYSSVIP---EF 424 Query: 384 TESD---ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKT 439 T S+ ++ V S + Q I E M+ + + + + + A K L Sbjct: 425 TVSEPFYPALEEVTSLLRQYINE-MEGVHLRAGIVTAMKIAEAGNGLIQANKLDNSLIAN 483 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P+RA+ V+ + V +I + + ++P + I + L Sbjct: 484 EPERAAAVVGIVVNLIHLCSSVFCPYLPTTSASILEQL 521 >gi|297837631|ref|XP_002886697.1| hypothetical protein ARALYDRAFT_315394 [Arabidopsis lyrata subsp. lyrata] gi|297332538|gb|EFH62956.1| hypothetical protein ARALYDRAFT_315394 [Arabidopsis lyrata subsp. lyrata] Length = 713 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 116/498 (23%), Positives = 214/498 (42%), Gaps = 54/498 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV AR+ RL G + ++ GTDE+G A Sbjct: 16 KRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNTIYICGTDEYGTATETKA 75 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T K D+ + D DIS+D F RT+ C+ ++ K+ + I + Sbjct: 76 LEENCTPKEICDK-YHAIHQVYDWFDISFDKFGRTSTPETK-VCQEIFNKLWENEWISED 133 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-------------NPVQWMEEEGYFFRL 169 Y + + D V K G + + H ++ G + R Sbjct: 134 TMKQPYCDTCKKFLADRLVCKTTPG-FRDTDHLFLELPLLKYKLKKYIKETSSSGSWSR- 191 Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP--QYI 227 +A Q S E +P + K GLK ++R WG+ +P + + + Sbjct: 192 NAIQTTDASLKE------VPNDSE-------KDGLKKRCITRD-LKWGVPVPHEKYKEKV 237 Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDILRFHAIYWPAFLLSA 282 YVW DA Y++ T + K+W P ++ + +GKD + FH + +P L Sbjct: 238 FYVWFDAPIGYVSITSCYTS---EWEKWWKNPENVELYQFMGKDNVFFHTVLFPCTHLGT 294 Query: 283 --NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALRYFLVREIACGKDG 339 + + K V ++ ++G K S+S G + +V + + V+ RY+L+ D Sbjct: 295 GEDWTMMKTVSVTDYLNYEGGKFSESKGVGVFGNDVKDTNIPVEVWRYYLLTNRPEKSDT 354 Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399 + D +K++N +L +GN V +S I K + G + S+ ++++ Sbjct: 355 TFKWDDFQKKLNHELLANLGNFVYLVLSFIAKPKNK-----GGYG----SLAEYAGKLVE 405 Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459 + + M+ + + L + L +E + Y WEL K + + V+ ++ LA Sbjct: 406 DYVKVMEKVKLKKGLHTTMLLSNEGNTYLQDTNFWELYKKDKPSCAVVIRTAAGLVHLLA 465 Query: 460 ILLQAFVPKLANKIFDIL 477 LL+ F+P + ++F L Sbjct: 466 RLLEPFMPSFSREVFKQL 483 >gi|302382698|ref|YP_003818521.1| methionyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264] gi|302193326|gb|ADL00898.1| methionyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264] Length = 567 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 122/519 (23%), Positives = 211/519 (40%), Gaps = 59/519 (11%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ I++A+ Y N H+G+ A M+ ADV ARF R G +VL+ TDEHG AA Sbjct: 3 RILITSALPYINGIKHLGNLAGSMLPADVFARFKRGQGHEVLYICATDEHGTPAELAAAA 62 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 AG + + D+ + +SYD F R++ + + + K + G I + Sbjct: 63 AGQDVQTYCDEQHEIQKAAGQAFGLSYDWFGRSSREPNRRLTQHFAKVLEANGLIEERVD 122 Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQY----------------YNAQHNP--VQ 158 YS+ D + D V + GA G Y+A ++ Sbjct: 123 RMVYSVDDARFLPDRYVEGTCPHCGHVGARGDQCDNCGRLLDPTDLIAPYSAVSGSTNLE 182 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + + + +D++ + ES ++ ++ + + GL D ++R WG+ Sbjct: 183 VRDTRHLYLLQTKIEDRIRGWIESKSDW--QTLAKSIALKHLDEGLIDRGITRD-LKWGV 239 Query: 219 KI--------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-----PAD----LH 261 + P + YVW DA Y+ T +G+ + W AD + Sbjct: 240 PVVGDDGGPRPGMEGKVFYVWFDAPIEYIGATEEWAEANGTTWRDWWRLDEGADDVRYVQ 299 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGNVIDPIEVI 317 +GKD + FH + +PA +L + P K F+ ++ G K S S + + + Sbjct: 300 FMGKDNVAFHTVSFPATILGSGEPWKTVDTLKAFN--WLNWYGGKFSTSQKRGVFMDQAL 357 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 E + D R+ L G D + + + N DLA+ +GN V+R V +DG++ Sbjct: 358 EILPADYWRWHLTAYGPEGSDAAFTWEQFQSTTNKDLADVLGNFVNRIVKFAESKFDGVV 417 Query: 378 P---TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 P TPG E+ ++ E M+ + AL V L +E Y PW Sbjct: 418 PDGGTPGPLEAKLEADVAAGIAEATAAFEAMEFRKACVALRAVWVLGNE---YLQEAAPW 474 Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 KT+ +R++ + + ++ A L +P A I Sbjct: 475 TAYKTDVERSAVGVRTGLNLVALFARLAAPVLPFTAPTI 513 >gi|297520080|ref|ZP_06938466.1| methionyl-tRNA synthetase [Escherichia coli OP50] Length = 390 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 7/215 (3%) Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 H IGKDI+ FH+++WPA L +N P +F HG++ G K+SKS G I + Sbjct: 5 HFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHF 64 Query: 321 GVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 D+LRY+ +++ D + + +RVNAD+ N + NL SR+ I K +DG++ Sbjct: 65 DADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL-- 122 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 A +D + + + I E +++ +A+ ++++L +RY D Q PW + K Sbjct: 123 --ANELADPQLYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQ 180 Query: 440 NPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 A + + + + R L L+ +PKL + Sbjct: 181 EGRDADLQAICSMGINLFRVLMTYLKPVLPKLTER 215 >gi|291333221|gb|ADD92931.1| putative tRNA binding domain protein [uncultured archaeon MedDCM-OCT-S04-C14] Length = 723 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 132/570 (23%), Positives = 224/570 (39%), Gaps = 95/570 (16%) Query: 32 DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ----NSRNFRDMADVL 87 D+ RF R G VL +G+DEHG I A+ G+T + VD+ N + D+ Sbjct: 4 DIQFRFERALGNRVLMVSGSDEHGTPITVTAETQGITPQQVVDEYHEINLKALLDLGCSW 63 Query: 88 DISYDD---------FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAY--Y 136 + D F RTT+ H + ++ + G + ++ L ++ + Sbjct: 64 STTLDPRGPEFGGALFNRTTDSEHKRMVQENFQSLEKAGFFERKTTEQYFELNEDGSGRF 123 Query: 137 NDDEVYKG----------------ADGQYYNAQH--NPVQWM---------EEEGYFFRL 169 D +G A G Y A NPV M E E F+RL Sbjct: 124 LPDRYVEGTCPSCEATDARGDQCDACGATYEAVELKNPVSKMNPSAKVVIRETEHLFYRL 183 Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY--- 226 +Q+ L + + H E + + R ++ GL +++R WGI +P Sbjct: 184 DLFQNALEEHAQ-HQEKVWKVNVREMTKQWLDMGLHPRAVTRD-LSWGIPVPLSGDSWDG 241 Query: 227 -IMYVWIDALTNYLTTTGYLDN------PDGSKA--KFW--------PADLHVIGKDILR 269 +YVW +A+ Y T PDG+ ++W P L+ +GKD + Sbjct: 242 KCVYVWFEAVQGYSTCARIWAQRQADALPDGADTWKRWWNVAEDGTKPRHLYFLGKDNIP 301 Query: 270 FHAIYWPAFLLSAN-------------LPLPKK------VFSHGFILHKGEKISKSLGNV 310 FH I WPA +L N LP P + V + +++ G + SKS + Sbjct: 302 FHTIIWPALILGLNHAHKGLSSTDPIALPGPGELALESDVPAMQYLMLAGGQFSKSRKHA 361 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM-- 368 + +E D+LRY+L + D ++ ++N +L GN V R +++ Sbjct: 362 VWLPSFLERYHPDSLRYYLSIVMPEFSDSDFNWPDFVAKINTELNANYGNFVHRVLTLGA 421 Query: 369 ILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 L ++ P P +S R +I ++Q AL Q++S+ ++ Sbjct: 422 RLPQHERKSPFEPHDGHACVQSHKDHVERAFNDITASLQRHRYKEALQQIMSVSQYGNQI 481 Query: 428 FDAQKPWE----LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 A PW+ ++ D +T+ + + R LAI Q F+P A ++++ L E Sbjct: 482 LQAAAPWKHLNGPQEGYEDSIATLAFCW-RISRFLAITTQPFMPTSAQQLWENLAQPSE- 539 Query: 484 RCFQSLDQRL---KPGFMLHKTFDPIFPRF 510 + D+ + P L T P+F R Sbjct: 540 VSLSAWDEAINWQSPLTWLEDTPQPLFDRL 569 >gi|50557232|ref|XP_506024.1| YALI0F29843p [Yarrowia lipolytica] gi|49651894|emb|CAG78837.1| YALI0F29843p [Yarrowia lipolytica] Length = 750 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 116/510 (22%), Positives = 217/510 (42%), Gaps = 43/510 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV +R+ + + LF GTDE+G A Sbjct: 193 QRNILITSALPYVNNVPHLGNIIGSVLSADVYSRYCKGRNYNALFICGTDEYGTATETKA 252 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 VT K D+ + +D+ D I +D F RTT + + + ++ K+ D G + Sbjct: 253 LEEKVTPKELCDKYHKIHKDVYDWFQIGFDYFGRTTTDKQTEIAQDIFMKLHDNGYLEAQ 312 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWM----------- 160 + Y + A+ D V Y+ A G + NP + + Sbjct: 313 KMTQLYCTQHNAFLADRFVEGICPKCGYEDARGDQCDGCGTLLNPFELIKPRCKLDGSSP 372 Query: 161 ---EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + E F L Q + + + ES + R ++ + L ++R W Sbjct: 373 EVRDSEHIFLSLDKLQKETVEWAQESAEKGDWSKNSRTITDGWLNNELHPRCITRDLV-W 431 Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADL---HVIGKDILR 269 G +P + ++YVW DA Y++ T +P+ KA +W P ++ +GKD + Sbjct: 432 GTPVPLEGFKNKVLYVWFDATIGYVSITANY-SPENWKA-WWNNPENVDLYQFMGKDNVP 489 Query: 270 FHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALR 326 FH + +PA LL P K + + ++ ++G K SKS G V + R Sbjct: 490 FHTVIFPATLLGTKQPWTKLHHLSTTEYLQYEGGKFSKSRGVGVFGNNAQDTGISPSVWR 549 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 Y+L+ D + D R N++L +GN V+R + Y+G++ Sbjct: 550 YYLLSARPESSDTQFSWDDFVARNNSELLANLGNFVNRVIKFSNAKYNGVVADFSTSELG 609 Query: 387 DESIL--SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTNPDR 443 D L + +L + M+N + A +++ S +++ D + L +P + Sbjct: 610 DTFTLLKADVDGLLTKYNTLMENTKLKSAQDTAMAISSRGNQFLQDNKLDNSLFADHPAK 669 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ V+ V + +I ++ ++ F+P+ A I Sbjct: 670 SAAVVGVALNLIHLVSAVIAPFMPETAESI 699 >gi|166796169|gb|AAI59044.1| Unknown (protein for IMAGE:7540772) [Xenopus (Silurana) tropicalis] Length = 655 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 83/328 (25%), Positives = 159/328 (48%), Gaps = 22/328 (6%) Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLT-TTGYLDNPDGSKAK 254 S+++ GLK ++R WG +P D + YVW DA Y++ T Y D + K Sbjct: 232 SWIRDGLKPRCITRD-LKWGTPVPLDGFRDKVFYVWFDAPIGYISITANYTDQWE----K 286 Query: 255 FWPAD-----LHVIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSL 307 +W + H + KD + FH++ +P+ LL A N L + + ++ ++ K SKS Sbjct: 287 WWKSTQQVQLYHFMAKDNVPFHSVIFPSCLLGAEDNYTLVNHIIATEYLNYEDGKFSKSR 346 Query: 308 G-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 G V + + D R++L+ G+D + L + N++L N +GN V+R+ Sbjct: 347 GVGVFGDMAKDTGIPADIWRFYLLYVRPEGQDSAFSWSDLMLKNNSELLNNLGNFVNRAG 406 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 + K ++G +P +E D+ +L+ + LQ+ ++++ I AL ++++ ++ Sbjct: 407 MFVQKFFNGCVPEMELLSE-DKRLLAQVAAELQQYNQHLEKVRIRDALRCILNISRHGNQ 465 Query: 427 YFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 Y +PW+ K N RA TV V V + L+++L ++P ++ I + L + E+ Sbjct: 466 YIQVNEPWKCIKGNQQEQKRAGTVTGVAVNMAALLSVMLHPYMPTVSGLIQEQLLMPQES 525 Query: 484 RCFQS-LDQRLKPGFMLHKTFDPIFPRF 510 + + RL+ G + P+F + Sbjct: 526 KVLTTDFCCRLQSGHQIGNV-SPLFQKL 552 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 2/102 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 12 KNVLITSALPYVNNVPHLGNIIGSVLSADVFARYCRLRNWNTLYICGTDEYGTATETKAM 71 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105 G+T + D+ + + DIS+D F RTT +H T Sbjct: 72 EEGLTPQQICDKYNAVHTAIYQWFDISFDFFGRTT-TQHQTT 112 >gi|146418697|ref|XP_001485314.1| hypothetical protein PGUG_03043 [Meyerozyma guilliermondii ATCC 6260] Length = 751 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 116/520 (22%), Positives = 221/520 (42%), Gaps = 44/520 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + I++A+ Y N PH+G+ ++ AD+ A++ + + LF GTDE+G Sbjct: 188 KNERNILITSALPYVNNVPHLGNIVGSVLSADIYAKYVQNRNYNSLFICGTDEYGTATET 247 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A VT + D+ + +D+ D DI++D F RTT + + + ++ K+ + G + Sbjct: 248 KALEEKVTPQELCDKYHKVHKDVYDWFDINFDHFGRTTTPQQTEIAQDIFLKLYNNGYLE 307 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME----------- 161 + Y +++ D V Y+ A G + N + E Sbjct: 308 EKTTEQLYCEEHKSFLADRFVEGTCPKCGYEDARGDQCDKCGNLLDPFELINPRCKLDNA 367 Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTF 214 + +L Q +L ++E + ++ S ++ GL+ ++R F Sbjct: 368 KPIPRNSTHIYLKLGDLQGELKEWFEKASTDGKWSKNAVQITSSWINRGLESRCITRDLF 427 Query: 215 DWGIKIPDDPQY--IMYVWIDALTNYLTTTG--YLDNPDGSKAKFWPADLHV-----IGK 265 WG +P + ++YVW DA Y++ T + D K+W HV +GK Sbjct: 428 -WGTPVPLKNYHDKVLYVWFDATIGYVSITANYFKDKNTEDWLKWWKNPEHVDLYQFMGK 486 Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV- 322 D + FH + +P+ + N + + ++ ++G K SKS G + +E G+ Sbjct: 487 DNVPFHTVVFPSSQIGTRDNWTKLHHLSTTEYLQYEGGKFSKSRGVGVFGNNA-KETGIT 545 Query: 323 -DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 RY+L D + R N++L +GN V+R V + Y+G+IP Sbjct: 546 PSVWRYYLASIRPETSDAQFSWGEFVTRNNSELLANLGNFVNRLVKFTIAKYNGVIPDYK 605 Query: 382 AFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKT 439 D ++ + +L ENM+ I + L +++ S + + D + L Sbjct: 606 VSEIPDYAVFEKDVNELLSSYIENMEAVNIRKGLELAMAISSRGNLFLQDNKLDNTLYTK 665 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 P ++ V+ V + +I ++ L+ F+P ++ +IL V Sbjct: 666 YPAKSDAVVGVGMNLIYLVSSLIYPFMPSTTAQMNEILNV 705 >gi|190346778|gb|EDK38945.2| hypothetical protein PGUG_03043 [Meyerozyma guilliermondii ATCC 6260] Length = 751 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 116/520 (22%), Positives = 221/520 (42%), Gaps = 44/520 (8%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + I++A+ Y N PH+G+ ++ AD+ A++ + + LF GTDE+G Sbjct: 188 KNERNILITSALPYVNNVPHLGNIVGSVLSADIYAKYVQNRNYNSLFICGTDEYGTATET 247 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A VT + D+ + +D+ D DI++D F RTT + + + ++ K+ + G + Sbjct: 248 KALEEKVTPQELCDKYHKVHKDVYDWFDINFDHFGRTTTPQQTEIAQDIFLKLYNNGYLE 307 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME----------- 161 + Y +++ D V Y+ A G + N + E Sbjct: 308 EKTTEQLYCEEHKSFLADRFVEGTCPKCGYEDARGDQCDKCGNLLDPFELINPRCKLDNA 367 Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTF 214 + +L Q +L ++E + ++ S ++ GL+ ++R F Sbjct: 368 KPIPRNSTHIYLKLGDLQGELKEWFEKASTDGKWSKNAVQITSSWINRGLESRCITRDLF 427 Query: 215 DWGIKIPDDPQY--IMYVWIDALTNYLTTTG--YLDNPDGSKAKFWPADLHV-----IGK 265 WG +P + ++YVW DA Y++ T + D K+W HV +GK Sbjct: 428 -WGTPVPLKNYHDKVLYVWFDATIGYVSITANYFKDKNTEDWLKWWKNPEHVDLYQFMGK 486 Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV- 322 D + FH + +P+ + N + + ++ ++G K SKS G + +E G+ Sbjct: 487 DNVPFHTVVFPSSQIGTRDNWTKLHHLSTTEYLQYEGGKFSKSRGVGVFGNNA-KETGIT 545 Query: 323 -DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 RY+L D + R N++L +GN V+R V + Y+G+IP Sbjct: 546 PSVWRYYLASIRPETSDAQFSWGEFVTRNNSELLANLGNFVNRLVKFTIAKYNGVIPDYK 605 Query: 382 AFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKT 439 D ++ + +L ENM+ I + L +++ S + + D + L Sbjct: 606 VSEIPDYAVFEKDVNELLSSYIENMEAVNIRKGLELAMAISSRGNLFLQDNKLDNTLYTK 665 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 P ++ V+ V + +I ++ L+ F+P ++ +IL V Sbjct: 666 YPAKSDAVVGVGMNLIYLVSSLIYPFMPSTTAQMNEILNV 705 >gi|116203381|ref|XP_001227502.1| hypothetical protein CHGG_09575 [Chaetomium globosum CBS 148.51] gi|88178093|gb|EAQ85561.1| hypothetical protein CHGG_09575 [Chaetomium globosum CBS 148.51] Length = 570 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 124/520 (23%), Positives = 217/520 (41%), Gaps = 73/520 (14%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFT---------------T 49 + +++A+ Y N PH+G+ ++ ADV AR+ R G++ L+ + Sbjct: 16 NVLVTSALPYVNNVPHLGNIIGSVLSADVFARYCRGRGINTLYVGGEQRPSFRQVRADLS 75 Query: 50 GTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109 GTDE+G AQ + + D+ + +IS+D F RTT ++H D + Sbjct: 76 GTDEYGTSTETRAQKEKCSPRELCDKFHAVHAQVYKWFNISFDVFGRTTTQQHTDITHHI 135 Query: 110 WKKISDKGDIYKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQ 158 + K+ G + + C + L D + K D + P+ Sbjct: 136 FHKLEKHGFLEERPTPQPYCNTHGSFLADRLIEGQCPLCKFPDARGDQCDGCSQLLEPIN 195 Query: 159 WM--------------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204 + E FF+L Q ++ S + E P R+ +++K GL Sbjct: 196 LVGPRCKLDGTMPVTHETRHVFFKLDKLQPQVESMLHN-VEKRWPTNARSATATWLKQGL 254 Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG-YLD-------NPDGSKAKFW 256 K +++R WG+ +P + + Y W DA Y++ T Y D NPD +F Sbjct: 255 KPFTITRD-IRWGVPVPGYDK-VFYSWFDACIGYVSITACYTDQWERWWRNPDVQLYQF- 311 Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPI 314 IGKD + FH++ +PA + K + + F+ ++G K SKS G + Sbjct: 312 ------IGKDNVVFHSVVFPATQIGTGDVWTKVHHLSTTDFLTYEGGKFSKSRGVGVFGD 365 Query: 315 EVIE-EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 V + +V D R++L+ D + +GL + N L NG+G VSR + +++ +Y Sbjct: 366 SVQQTDVPPDVWRFYLLSCRPETGDTEFRWEGLIEVNNNLLFNGVGGFVSRVLRLVVDEY 425 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 ++P D + V + +L + M + L + E+ R D Sbjct: 426 SSVVPR----WSEDYGFVKVTNDLLNRYIKEMDGVELRAGLLTAL----EISRCGDTLLS 477 Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +L +RAS V+ +TV ++ LA LL ++P A I Sbjct: 478 GDLHTQ--ERAS-VVGLTVNLVHLLASLLAPYMPDTAAAI 514 >gi|283945504|ref|NP_001017000.2| methionyl-tRNA synthetase [Xenopus (Silurana) tropicalis] gi|195539926|gb|AAI67909.1| Unknown (protein for MGC:135671) [Xenopus (Silurana) tropicalis] Length = 905 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 83/328 (25%), Positives = 159/328 (48%), Gaps = 22/328 (6%) Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLT-TTGYLDNPDGSKAK 254 S+++ GLK ++R WG +P D + YVW DA Y++ T Y D + K Sbjct: 482 SWIRDGLKPRCITRD-LKWGTPVPLDGFRDKVFYVWFDAPIGYISITANYTDQWE----K 536 Query: 255 FWPAD-----LHVIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSL 307 +W + H + KD + FH++ +P+ LL A N L + + ++ ++ K SKS Sbjct: 537 WWKSTQQVQLYHFMAKDNVPFHSVIFPSCLLGAEDNYTLVNHIIATEYLNYEDGKFSKSR 596 Query: 308 G-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 G V + + D R++L+ G+D + L + N++L N +GN V+R+ Sbjct: 597 GVGVFGDMAKDTGIPADIWRFYLLYVRPEGQDSAFSWSDLMLKNNSELLNNLGNFVNRAG 656 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 + K ++G +P +E D+ +L+ + LQ+ ++++ I AL ++++ ++ Sbjct: 657 MFVQKFFNGCVPEMELLSE-DKRLLAQVAAELQQYNQHLEKVRIRDALRCILNISRHGNQ 715 Query: 427 YFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 Y +PW+ K N RA TV V V + L+++L ++P ++ I + L + E+ Sbjct: 716 YIQVNEPWKCIKGNQQEQKRAGTVTGVAVNMAALLSVMLHPYMPTVSGLIQEQLLMPQES 775 Query: 484 RCFQS-LDQRLKPGFMLHKTFDPIFPRF 510 + + RL+ G + P+F + Sbjct: 776 KVLTTDFCCRLQSGHQI-GNVSPLFQKL 802 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 3/105 (2%) Query: 3 EREK-LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 E EK + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G Sbjct: 259 EGEKNVLITSALPYVNNVPHLGNIIGSVLSADVFARYCRLRNWNTLYICGTDEYGTATET 318 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105 A G+T + D+ + + DIS+D F RTT +H T Sbjct: 319 KAMEEGLTPQQICDKYNAVHTAIYQWFDISFDFFGRTT-TQHQTT 362 >gi|159487881|ref|XP_001701951.1| predicted protein [Chlamydomonas reinhardtii] gi|158281170|gb|EDP06926.1| predicted protein [Chlamydomonas reinhardtii] Length = 796 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 118/520 (22%), Positives = 226/520 (43%), Gaps = 48/520 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R + I++A+ Y N PH+G+ ++ ADV AR+ R G + ++ GTDE+G A Sbjct: 8 RRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRARGHNCIYVCGTDEYGTATETKA 67 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G+T + D+ + DI++D F RT + + ++K + +G + + Sbjct: 68 LEEGLTCQQICDKYHAIHAGIYQWFDIAFDRFGRTPTRAQTKIAQDIFKSLQSRGQLVQQ 127 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWMEEE----GYFF 167 YS + D V Y+ A G + NP + + + G Sbjct: 128 EMQQLYSEAAGKFLADRFVTGTCPKCGYEDARGDQCDGCGNLLNPTELIRPKCKLTGTTP 187 Query: 168 RLSAYQDKLLSYYESHP---EFILPIERR-----NEVI---SFVKSGLKDLSLSRKTFDW 216 + + + L + P E+I + N V ++++ GLK ++R W Sbjct: 188 VMRSTRHVFLDLPQLSPQLQEYITTTSAQGGWSANCVTLTNAWMRDGLKLRCITRD-LKW 246 Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI---GKDILRFH 271 G +P + + + YVW DA Y++ T PD P D+ ++ GKD + FH Sbjct: 247 GTPVPLEGFEEKVFYVWFDAPIGYISITANY-TPDWEAWWKSPKDVELVQFMGKDNVPFH 305 Query: 272 AIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE---VIEEVGVDALR 326 + +PA LL + + + + ++ ++G K SKS G E ++ + V Sbjct: 306 TVIFPATLLGTGGDWTMMRNISVTEYLNYEGGKFSKSRGTGEQEEEESRLLTTIIVPGTP 365 Query: 327 YFLVREIACGKDGFYDKDGLKKRV--NADLANGIGNLVS--RSVSMILKDYDGMIP--TP 380 L + L+ + ++ L + NL + R++ + K +DG++P T Sbjct: 366 LCLFQTPPRRTPRRPFTHVLRSTLPNSSQLFPTLPNLPTAPRALMFVSKFFDGVVPGATA 425 Query: 381 GAFTESDESILSVCSRVLQEIRE---NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 E++E +V +V + E M+ + L V+S+ ++ +++ KPW Sbjct: 426 AGQAEAEELGKTVGPKVRVPVDEYIAAMERIKLKEGLRLVMSISADGNKFLQDTKPWVAV 485 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K + D+ +T++ +V ++R L+ L+ ++P L+ KI L Sbjct: 486 KEDKDKCATLVATSVGLVRLLSALMAPYMPSLSAKILQQL 525 >gi|315057065|ref|XP_003177907.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893] gi|311339753|gb|EFQ98955.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893] Length = 650 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 116/515 (22%), Positives = 221/515 (42%), Gaps = 47/515 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV +R+++ G L+ GTDE+G A Sbjct: 13 QRNILITSALPYVNNVPHLGNIVGSVLSADVFSRYNKACGRPTLYVCGTDEYGTATETKA 72 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GVT + + ++ +++ +I +D F RT H + + ++K++ + G + + Sbjct: 73 LEEGVTPEELCSKYNKIHQEVYSWFNIGFDIFGRTPTTAHTEISQSIFKRLYEHGYLEEK 132 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH-----------------NP 156 + + +++ D V Y A G Q QH P Sbjct: 133 TTEQPFCEKHDSFLADRFVEGECPRCHYDDARGDQCDKCQHLLDPFDLINPRCKVDGATP 192 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE-FILPIERRNEVISFVKSGLKDLSLSRKTFD 215 V+ + + F L Q ++ + + E P R S++K GL+ ++R Sbjct: 193 VR-RQTKHIFLLLDKLQPEIEKWSATAIEKGDWPKNSRVITGSWLKEGLQPRGITRD-LK 250 Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDIL 268 WG+ +P D + ++YVW +A Y + T N K+W P D+ + +GKD + Sbjct: 251 WGVPVPLDGFEKKVLYVWFEACIGYPSITA---NYTPEWEKWWRNPEDVQLYQFLGKDNV 307 Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325 FHA+ +P L + + + ++ ++G K SKS G + E V D Sbjct: 308 PFHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGNNAKETGVSSDVW 367 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAF 383 RY+L++ D ++ N +L +GNLV+R V ++ K Y+ +IP Sbjct: 368 RYYLLKNRPETGDTQFEWKSFIDSNNGELLAKLGNLVNRVVKLVASPKAYNSVIPD-FTV 426 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPD 442 TE L + +L++ M+ + + + + + A K L P+ Sbjct: 427 TEPFYPALEEVTGLLRQYINEMEGVHLRAGILTAMKIAEAGNGLIQANKLDNSLIANEPE 486 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 RA+ V+ + V +I + + ++P + I + L Sbjct: 487 RAAAVVGIVVNLIHLCSSVFCPYLPATSASILEQL 521 >gi|156841046|ref|XP_001643899.1| hypothetical protein Kpol_1067p13 [Vanderwaltozyma polyspora DSM 70294] gi|156114528|gb|EDO16041.1| hypothetical protein Kpol_1067p13 [Vanderwaltozyma polyspora DSM 70294] Length = 750 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 110/516 (21%), Positives = 210/516 (40%), Gaps = 51/516 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD+ +R+ + + LF GTDE+G A Sbjct: 196 ILITSALPYVNNVPHLGNIVGSVLSADIFSRYCKTRNYNTLFICGTDEYGTATETKALEE 255 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT + D+ + I +D F RTT ++ + + ++ K++ G + + Sbjct: 256 GVTPRELCDKYHEIHAQVYKWFQIDFDYFGRTTTEKQTEIAQDIFLKLNKNGFLEEQSMK 315 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161 Y ++ D V Y+ A G + + E Sbjct: 316 QLYCPVHNSFLADRYVEGECPKCHYEDARGDQCDKCGGLLDAFELINPRCKLDNATPEPK 375 Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 + F L + + + ++ E + S++K GL ++R WG Sbjct: 376 FSDHIFLSLDKLEKNIADWVAKASDEGNWSKNSKTITQSWLKDGLHPRCITRDLV-WGTP 434 Query: 220 IPDDP--QYIMYVWIDALTNYLTTTG--------YLDNPDGSKAKFWPADLHVIGKDILR 269 +P D + ++YVW DA Y++ T + NPD K +GKD + Sbjct: 435 VPLDKYKEKVLYVWFDATIGYVSITANYTNEWQKWWKNPDNVKL------YQFMGKDNVP 488 Query: 270 FHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALR 326 FH + +P + + + + + ++ ++G K SKS G V V R Sbjct: 489 FHTVIFPGSEIGTDDGWTMLHHLNTTEYLQYEGGKFSKSRGVGVFGNNAQDSGVSPSVWR 548 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFT 384 Y+L D + D R N++L +GN V+R + + Y+G++P P Sbjct: 549 YYLASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRIIKFVNAKYNGVVPAYDPKKL- 607 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDR 443 E+ + S ++L M+ R L +SL + +++ K L NPD+ Sbjct: 608 ENYGGLCSDIEKILNNYISEMEQAHERRGLELAMSLSARGNQFLQENKLDNTLFSQNPDK 667 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + V+ V + ++ +A ++ ++P+ + I+ +L V Sbjct: 668 SDAVVGVALNMVYTVASIIYPYMPETSEAIYRMLNV 703 >gi|322694565|gb|EFY86391.1| methionyl-tRNA synthetase [Metarhizium acridum CQMa 102] Length = 643 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 120/523 (22%), Positives = 226/523 (43%), Gaps = 69/523 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV +R+ +L L+ GTDE+G A Sbjct: 13 KRNILITSALPYVNNVPHLGNIVGSVLSADVFSRYSKLRDRPTLYICGTDEYGTATETKA 72 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G T + D+ +++ D +I +D F RTT ++ + + ++ K+ + G + + Sbjct: 73 LETGQTPQQLCDEFHVKHKEVYDWFEIGFDHFGRTTTQKQTEIVQDIFLKLHENGFLEER 132 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYN--------------------AQH 154 + Y + + Y D V Y A G + AQ Sbjct: 133 TTTQPYCEKHDGYLADRFVEGTCPKCGYDDARGDQCDKCGGLLDPFELINPRCKVDGAQP 192 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 P + + F +L Q + ++E +H ++ P S++ GL+ S++R Sbjct: 193 IP---RDTKHIFLKLDRLQSDIEKWFEEAHKKYGWPQNGVGITQSWLTKGLEGRSITRD- 248 Query: 214 FDWGIKIPDDPQY---IMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IG 264 WG+ IP P Y ++YVW DA Y + T Y D + K+W +V +G Sbjct: 249 LKWGVPIPL-PGYEKKVIYVWFDACIGYPSITANYTDEWE----KWWKNPDNVTLYQFMG 303 Query: 265 KDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 KD + FH + +P + + + + ++ ++ K SKS G + +V +++G+ Sbjct: 304 KDNVPFHTVIFPGSEIGTGYKWTMLNHLSTTEYLNYENGKFSKSRGVGVFGNQV-KDIGI 362 Query: 323 D--ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 RY+L+ D ++ N++L GN V+R V + DG +P Sbjct: 363 SPSVWRYYLLSNRPESGDTQFEWQNFVLANNSELLANFGNFVNRIVKFVNAKCDGTVPEF 422 Query: 381 GAFTESDES------ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 A T +D++ IL V + +L E + M+ I + +++ + +E + + Sbjct: 423 SA-TYTDDTFDFAGWILRV-NALLSEYVDLMEKVHIRAGVKKLMEISTEGNTLLQ----Y 476 Query: 435 ELKKTN----PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 L TN P+R TV+ + + + LA L ++P + I Sbjct: 477 RLDNTNLVEKPERTKTVIGLALNLCHLLASLASPYMPSTSESI 519 >gi|312211904|emb|CBX91988.1| hypothetical protein [Leptosphaeria maculans] Length = 738 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 128/524 (24%), Positives = 220/524 (41%), Gaps = 63/524 (12%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ER L I++A+ Y N PH+G+ ++ ADV ARF R G + L+ GTDE+G Sbjct: 14 ERNVL-ITSALPYVNNVPHLGNIVGSVLSADVFARFSRARGYNTLYVCGTDEYGTATETK 72 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A VT K D+ ++ +IS+D F RT ++ D + ++ K+ G + + Sbjct: 73 AIEEKVTPKELCDKYYALHSEVYKWFNISFDHFGRTPTQQQTDIAQDIFTKLYKNGYLEE 132 Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH-----------------N 155 + Y +++ D V Y+ A G Q H Sbjct: 133 QVTTQPYCETHKSFLADRFVEGTCPLCNYEDARGDQCDKCGHLLDPLELKNPRCKLDGAT 192 Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTF 214 PV E + + L Q + ++E + ++ S++K GL+ ++R Sbjct: 193 PVP-RETKHVYLGLDKLQPAVQKWFEEESKKGNWSSNGIQITASWLKEGLRPRGITRD-L 250 Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTG-YLD-------NPDGSKAKFWPADLHVIG 264 WG +P + +MYVW DA Y++ T Y D NP+ K +G Sbjct: 251 KWGTAVPLEGYEDKVMYVWFDACIGYVSITATYTDEWQKWWHNPEQVKL------YQFMG 304 Query: 265 KDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 KD + FH + +P + N + + + ++ ++ K SKS N+ +E G+ Sbjct: 305 KDNVPFHTVVFPCSQIGTKDNWTMLNTISTTEYLNYENGKFSKSR-NIGVFGNNAKETGI 363 Query: 323 --DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPT 379 D RY+L+ D ++ G N +L +GN V+R + + K YD +IP Sbjct: 364 SSDVWRYYLLSHRPETGDTEFEWAGFIAANNNELLKNLGNFVNRVIKFVNSKIYDSVIPD 423 Query: 380 PGAF-----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKP 433 F TE + + + R + E +++ I AL+ + L S ++ D + Sbjct: 424 YTKFDDPYFTEHKKKVNDLLKRYISE----LEDVKIRAALSTALHLSSLGNQLLQDNKLD 479 Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +L PDR + V+ + + I LA L+Q ++P I L Sbjct: 480 NKLATEQPDRCAAVVGLALSHIHLLASLIQPYMPDTTTAILTQL 523 >gi|255723323|ref|XP_002546595.1| methionyl-tRNA synthetase [Candida tropicalis MYA-3404] gi|240130726|gb|EER30289.1| methionyl-tRNA synthetase [Candida tropicalis MYA-3404] Length = 748 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 111/517 (21%), Positives = 222/517 (42%), Gaps = 44/517 (8%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + + I++A+ Y N PH+G+ ++ AD+ +R+ + + LF GTDE+G Sbjct: 185 DERNILITSALPYVNNVPHLGNIVGSVLSADIYSRYAKNRNYNALFVCGTDEYGTATETK 244 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A VT + D+ +++ D DI +D F RTT + + ++ K+ G + + Sbjct: 245 ALEEKVTPQQLCDKYHAIHKEVYDWFDIGFDYFGRTTTPLQTEIAQDIFMKLHKNGYLEE 304 Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN---PVQWM---------- 160 Y +++ D V Y A G + N P++ + Sbjct: 305 KTTEQLYCEEHKSFLADRFVEGTCPKCEYDDARGDQCDKCGNLLDPLELIKPRCKLDGAS 364 Query: 161 ----EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 E + +L+ ++ L + +S + ++ S+ K GL+ ++R Sbjct: 365 PIVKESTHIYLKLNELEEPLKEWIIDSSAKGAWSKNSKSITDSWTKRGLEPRCITRDLI- 423 Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTG--YLDNPDGSKAKFWPADLHV-----IGKD 266 WG +P + ++YVW DA Y++ T + D K+W +V +GKD Sbjct: 424 WGTPVPLKGYEEKVLYVWFDATIGYISITANYFKDGNVDDYLKWWKNPENVDLYQFMGKD 483 Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD- 323 + FH + +PA + N + + ++ ++ K SKS G + +E GV Sbjct: 484 NVPFHTVVFPASQIGTGDNWTKLHHLSTTEYLQYENGKFSKSRGVGVFGNNA-KETGVSP 542 Query: 324 -ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 RY+L +D + D + N +L +GN V+R V ++ Y+G++P Sbjct: 543 SVWRYYLASNRPENQDSHFSWDEFVAKNNNELLANLGNYVNRIVKFLIAKYNGVVPKYDV 602 Query: 383 FTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTN 440 D S + +L ENM++ + + L +++ S +++ D + L Sbjct: 603 SNIPDYASFEKDINTLLSSYIENMESVNLRKGLELAMAISSRGNQFLQDNKLDNSLYTNQ 662 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P+++ V+ V + ++ ++ ++ F+P+ +I +IL Sbjct: 663 PNKSDAVVAVAINLVYLISAIIYPFMPETTKQINEIL 699 >gi|311978039|ref|YP_003987159.1| methionyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus] gi|82000411|sp|Q5UR82|SYM_MIMIV RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|55417250|gb|AAV50900.1| methyonyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus] gi|308204961|gb|ADO18762.1| methionyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus] Length = 550 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 122/525 (23%), Positives = 234/525 (44%), Gaps = 60/525 (11%) Query: 5 EKLYISTAIAYPN-AQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +K ++++A+ YPN + PH+G+ +++ DV ARF R G +V++ GTDE+G A Sbjct: 2 QKFFVTSALPYPNNSSPHLGNLVGALLSGDVYARFKRNQGHEVIYLCGTDEYGTTTMIRA 61 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 + GVT + D+ + + D +I +D F RT+ + + ++ + + G I + Sbjct: 62 RKEGVTCRELCDKYFELHKKVYDWFNIEFDVFGRTSTTKQTEITWEIFNGLYNNGYIEEK 121 Query: 123 CYSGWYSLRDEAYYNDDEV--YKGADGQYYNA------QHNPVQWMEEEGYFFR------ 168 + + + Y D + Y DG N Q Q M + Sbjct: 122 TTVQAFCEKCDMYLADTYLKGYCYHDGCRENRVISNGDQCEICQKMIDVNKLINPFCSIC 181 Query: 169 ----LSAYQDKL-LSYYESHP---EFILPIERRNEVISFVKS----GLKDLSLSRKTFDW 216 + D L LS + P +++ +E + +++ K+ GL ++R +W Sbjct: 182 LTPPIQKSTDHLYLSLDKLTPLVQQYLDRVEFDSRIMAISKAWLEIGLNPRCITRD-LEW 240 Query: 217 GIKIPD--DPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI---GK 265 G IP DP+ + YVW DA Y + L N ++ + + + K Sbjct: 241 GTPIPINLDPKLEKYADKVFYVWFDAPIGYYSI---LANERDDWREWLNSGVTWVSTQAK 297 Query: 266 DILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVI--DPI-EVIEEV 320 D + FH+I +PA ++ +N LPL ++ ++L++G+K SKS G + D + E+ ++ Sbjct: 298 DNVPFHSIVFPASVIGSNIELPLIDRICGTDYLLYEGQKFSKSQGVGLFGDKVAEISPKL 357 Query: 321 GV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 G+ D R++L++ +D ++ + + V DL N IGN ++R S++ K Sbjct: 358 GINEDYWRFYLMKIRPETQDSSFNLEEFVRIVKTDLVNNIGNFINRVFSLLEK------- 410 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438 TP + + + I +++ +M L + + S +++ + KPW + K Sbjct: 411 TP--YRDLNYQISPEYIEFIKKYEVSMDEFKFRDGLKICLEMSSRGNKFVQSTKPWTMIK 468 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 D ++ V + L LL+ +PK A + L ++N Sbjct: 469 DGLD-TQEIMTEAVGICWILLNLLKPIIPKSACDMLSNLDTDNQN 512 >gi|170099107|ref|XP_001880772.1| predicted protein [Laccaria bicolor S238N-H82] gi|164644297|gb|EDR08547.1| predicted protein [Laccaria bicolor S238N-H82] Length = 718 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 122/538 (22%), Positives = 218/538 (40%), Gaps = 65/538 (12%) Query: 2 KEREK-LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHR--LDGLDVLFTTGTDEHGQK 57 K+ EK + I++A+ Y N PH+G+ + ADV +R++R L+ GTDE+G Sbjct: 44 KQGEKNILITSALPYCNNVPHLGNIIGSTLSADVFSRYNRAWTRNRRTLYICGTDEYGTA 103 Query: 58 IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117 A G+T + D+ ++ + DI +D F RT+ H + + ++ + G Sbjct: 104 TETQALKEGITPRELCDKYHVLHKETYEWFDIGFDHFGRTSTPLHTEIAQEIYTNLGKNG 163 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME-------- 161 + K Y + D V ++ A G + + +E Sbjct: 164 VLEKQEKEQTYCEGCPKFLADRFVEGICPHCGFEDARGDQCDGCSRTLDAIELIKPRCLV 223 Query: 162 ----------EEGYFFRLSAYQDKLLSYYESH-------PEFILPIERRNEVI-SFVKSG 203 + +L A Q + + + P + I E+I + +K+G Sbjct: 224 DKTHVVTTKTSAHMYLKLDAIQPRTEEWIKKSWKAGKWSPNAV--INGDGEIIDARLKNG 281 Query: 204 LKDLSLSRKTFDWGIKIPDDPQ-------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256 L L+R WG+ +P + + ++YVW DA Y + T P+ + F Sbjct: 282 LMPTPLTRD-LKWGVPVPIEGEDTFGMAGKVLYVWFDAPIGYPSITANY-TPEWKQWWFN 339 Query: 257 PADL---HVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NV 310 P D+ +GKD + FH +YWP+ L K + + ++ ++G K SKS V Sbjct: 340 PRDVDLYQFMGKDNVYFHTVYWPSVQLGDGRDWTKLHHLSTTEYLNYEGGKFSKSKNRGV 399 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 P + RY+L+ D + R + GN V+R++ + Sbjct: 400 FGPAAKETGIPSSVWRYYLLSTRPETADAMFSWPECVSREGRSILRSFGNFVNRALKFVS 459 Query: 371 KDYDGMIP----TPGAFTESDE---SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 YDG+IP PG + +D +S+ + +L++ + M+ + L Q+I L+S Sbjct: 460 SQYDGVIPESGDPPGPLSPNDPLDGEFISIVNNLLRDYIDAMEAVKLRLGL-QIIMLISN 518 Query: 424 VDRYFDAQKPWE--LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + L NP R + V+ V +I L+ L+ F+P ++ I L V Sbjct: 519 RGNTYLQSSGLNKALMAENPTRCAQVISRAVNLIYVLSSLIYPFMPATSDSIIAQLNV 576 >gi|70933656|ref|XP_738171.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56514164|emb|CAH82575.1| hypothetical protein PC300080.00.0 [Plasmodium chabaudi chabaudi] Length = 316 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 47/110 (42%), Positives = 69/110 (62%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + Y++TAI Y N PHIGHAYE+++AD +AR+HR G D+ FTTG DEHG KIA A Sbjct: 206 KNDNFYVTTAINYVNGDPHIGHAYEIVLADTIARYHRNLGRDLFFTTGADEHGLKIANQA 265 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112 +T + DQN F+++ L + D ++RTT + H + + +W K Sbjct: 266 ARNNMTPQELCDQNVIKFKNLNKNLHTTEDYYVRTTSETHKNIAQSIWTK 315 >gi|322710337|gb|EFZ01912.1| methionyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23] Length = 644 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 118/523 (22%), Positives = 226/523 (43%), Gaps = 69/523 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + +++A+ Y N PH+G+ ++ ADV +R+ +L L+ GTDE+G A Sbjct: 13 KRNILVTSALPYVNNVPHLGNIVGSVLSADVFSRYSKLRDRPTLYICGTDEYGTATETKA 72 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G T + D+ +++ D +I +D F RTT ++ + + ++ K+ + G + + Sbjct: 73 LETGQTPQQLCDEFHVKHKEVYDWFEIGFDHFGRTTTQKQTEIVQDIFLKLHENGFLEER 132 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYN--------------------AQH 154 + Y + + Y D V Y A G + AQ Sbjct: 133 TTTQPYCEKHDGYLADRFVEGTCPKCGYDDARGDQCDKCGGLLDPFELINPRCKVDGAQP 192 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 P + + F +L Q + ++E +H ++ P S++ GL+ S++R Sbjct: 193 IP---RDTKHIFLKLDMLQSDIEKWFEEAHKKYGWPQNGVGITQSWLTKGLEGRSITRD- 248 Query: 214 FDWGIKIPDDPQY---IMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IG 264 WG+ IP P Y ++YVW DA Y + T Y D + K+W +V +G Sbjct: 249 LKWGVPIPL-PGYEKKVIYVWFDACIGYPSITANYTDEWE----KWWKNPDNVTLYQFMG 303 Query: 265 KDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322 KD + FH + +P + + + + ++ ++ K SKS G + +V +++G+ Sbjct: 304 KDNVPFHTVIFPGSEIGTGYKWTMLNHLSTTEYLNYENGKFSKSRGVGVFGNQV-KDIGI 362 Query: 323 D--ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 RY+L+ D ++ N++L GN V+R V + DG +P Sbjct: 363 SPSVWRYYLLSNRPESGDTQFEWQNFVLANNSELLANFGNFVNRIVKFVNAKCDGTVPEF 422 Query: 381 GAFTESDES------ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 A T +D++ IL + + +L E + M+ I + +++ + +E + + Sbjct: 423 SA-TYTDDTFDFAGWILRI-NALLSEYVDLMEKVHIRAGVKKLMEISTEGNMLLQ----Y 476 Query: 435 ELKKTN----PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 L TN P+R TV+ + + + LA L ++P + I Sbjct: 477 RLDNTNLVEKPERTKTVIGLALNLCHLLASLASPYMPSTSESI 519 >gi|126131760|ref|XP_001382405.1| methionyl tRNA synthetase [Scheffersomyces stipitis CBS 6054] gi|126094230|gb|ABN64376.1| methionyl tRNA synthetase [Scheffersomyces stipitis CBS 6054] Length = 757 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 108/514 (21%), Positives = 225/514 (43%), Gaps = 46/514 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD+ AR+ + + ++ GTDE+G A Sbjct: 197 ILITSALPYVNNVPHLGNIIGSVLSADIYARYAKNRNYNAVYVCGTDEYGTATETKALEE 256 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 VT + D+ + +++ D DI +D F RTT + + ++ ++ + + Sbjct: 257 KVTPQQLCDKYHKIHKEVYDWFDIGFDYFGRTTTPLQTEIAQDIFTRLHKNNYLEERTTE 316 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN---PVQWM-------------- 160 Y +++ D V Y+ A G + N P+Q + Sbjct: 317 QLYCEEHKSFLADRFVEGTCPHCQYEDARGDQCDKCGNLLDPLQLIKPRCKVDGATPVVR 376 Query: 161 EEEGYFFRLSAYQDKLLSYYE---SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 E + +L+ + +L + + SH E+ + S++K GL+ ++R WG Sbjct: 377 ESTHIYLKLNELEGELAEWVDHASSHGEW--SKNAKTITASWIKRGLEPRCITRD-LSWG 433 Query: 218 IKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW---PADL---HVIGKDIL 268 +P + + ++YVW DA Y++ T Y + +G + W P ++ +GKD + Sbjct: 434 TPVPLEGYEEKVLYVWFDATIGYVSITANYFKDHNGDDWRKWWKNPENVDLYQFMGKDNV 493 Query: 269 RFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDAL 325 FH + +PA + K + + ++ ++ K SKS G V + Sbjct: 494 PFHTVVFPASQIGTRDVWTKLHHLSTTEYLQYENGKFSKSRGVGVFGNSAKDTGIPASVW 553 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 RY+L D + + + N++L +GN V+R V ++ Y+G+IP Sbjct: 554 RYYLASVRPETSDSQFSWEEFVTKNNSELLANLGNFVNRIVKFVIAKYNGVIPKFDTKNV 613 Query: 386 SD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTNPDR 443 D E + +++L+ + M+ + + L +++ S +++ D + L PD+ Sbjct: 614 PDYEKFETEVNQLLKSYVDTMEAVSLRKGLELAMAISSRGNQFLQDNKLDNSLYANLPDK 673 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + V+ V + ++ ++ ++ F+P+ +I +IL Sbjct: 674 SDAVVGVALNLVYLVSAIIFPFMPETTKQINEIL 707 >gi|154288292|ref|XP_001544941.1| hypothetical protein HCAG_01988 [Ajellomyces capsulatus NAm1] gi|150408582|gb|EDN04123.1| hypothetical protein HCAG_01988 [Ajellomyces capsulatus NAm1] Length = 638 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 130/562 (23%), Positives = 242/562 (43%), Gaps = 66/562 (11%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLAR--FHRLDGLDVLFTTGTDEHGQKIA 59 K + + I++A+ Y N PH+G+ I+ VL+ + + G L+ GTDE+G Sbjct: 11 KGQRNILITSALPYVNNVPHLGN----IVGSVLSADVYQKACGRPTLYICGTDEYGTATE 66 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A GVT + + ++ +++ + +I +D F RT +H + + ++K++ D G + Sbjct: 67 TKALEEGVTPEELCAKYNKIHQEVYEWFEIGFDIFGRTPTAQHTEISQAIFKRLYDNGFL 126 Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEE 162 + + + +++ D V Y A G Q H NP ++ Sbjct: 127 EEKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLDG 186 Query: 163 EGYFFRLSAY----QDKLLSYYES--HPEFI---LPIERRNEVISFVKSGLKDLSLSRKT 213 R + + DKL E+ HP P R S++K GLKD ++R Sbjct: 187 ATPVRRNTKHIHLLLDKLQPEIEAWVHPAIEKGDWPKNSRVITESWLKEGLKDRGITRD- 245 Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IGK 265 WG+ +P D + ++YVW +A Y + T PD + W P ++ + +GK Sbjct: 246 LKWGVPVPLDGYEKKVLYVWFEACIGYPSITANY-TPD---WELWWRDPDNVQLYQFLGK 301 Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 D + FH++ +P + K + + ++ ++ K SKS G + E V Sbjct: 302 DNVPFHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKETGVPA 361 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTP 380 D RY+L++ D ++ N +L +GNLV+R V +I K Y ++P Sbjct: 362 DVWRYYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSIVPD- 420 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKT 439 TE +L + +L++ M+ + +A + +V + + K L + Sbjct: 421 FTVTEPFTPVLGEITTLLRQYITEMEGVHLRAGVATAMRIVEVGNGLIQSNKLDNSLIAS 480 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ-------- 491 P+RA++V+ + + +I ++ + ++P + I + L V N SLD+ Sbjct: 481 EPERAASVVGIVINLIHLISSIFSPYLPATSASILEQLNVPFAN--IPSLDELKDEGWKP 538 Query: 492 -RLKPGFMLHKT---FDPIFPR 509 +KPG + K F I P+ Sbjct: 539 ALIKPGHQIGKAKYLFSQIDPK 560 >gi|239609857|gb|EEQ86844.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis ER-3] Length = 636 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 128/562 (22%), Positives = 243/562 (43%), Gaps = 64/562 (11%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + I++A+ Y N PH+G+ ++ ADV A + + G L+ GTDE+G Sbjct: 11 KGERNILITSALPYVNNVPHLGNIVGSVLSADVFASY-KACGRPTLYVCGTDEYGTTTET 69 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A GVT + + ++ R++ + +I +D F RT +H + + ++K++ + G + Sbjct: 70 KALEEGVTPEELCAKYNKLHREVYEWFEIGFDVFGRTPTAQHTEISQEIFKRLYENGFLT 129 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 + + + +++ D V Y A G + N + E + +L Sbjct: 130 EKTAEHPFCEKHDSFLADRYVEGECPRCAYNDARGDQCDKCGNLLDPFELKNPRCKLDGA 189 Query: 173 Q-------------DKLLSYYES--HPEFI---LPIERRNEVISFVKSGLKDLSLSRKTF 214 DKL E+ HP P R S++K GLKD ++R Sbjct: 190 TPVLRNTRHIYLMLDKLQPEIEAWVHPAIEKGDWPKNSRVITESWLKEGLKDRCITRDV- 248 Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IGKD 266 WG+ +P + + ++YVW +A Y + T PD + W P ++ + +GKD Sbjct: 249 KWGVPVPLEGYEKKVLYVWFEACIGYPSITANY-TPDW---ELWWRDPDNVQLYQFLGKD 304 Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV-- 322 + FH++ +P + K + + ++ ++ K SKS G + + +E GV Sbjct: 305 NVPFHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFG-DNAQETGVPA 363 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTP 380 D RY+L++ D ++ N++L +GNLV+R V ++ K Y+ ++P Sbjct: 364 DVWRYYLLKNRPETGDTQFEWRSFVDANNSELLAKLGNLVNRMVKLVASPKAYNSIVPD- 422 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKT 439 TE + L + +L++ M++ + + + +V + + K L Sbjct: 423 FTVTEPFKPALEEITTLLRQYITEMESVHLRSGVGTAMKIVEAGNGLIQSNKLDNSLIAN 482 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD--------- 490 P+RA+ V+ + V +I ++ + ++P + I + L V N SLD Sbjct: 483 EPERAAAVVGIVVNLIYLISSIFSPYLPATSASILEQLNVPFTN--IPSLDDLKDEGWEP 540 Query: 491 QRLKPGFMLHKT---FDPIFPR 509 + +KPG + K F I P+ Sbjct: 541 ELIKPGHKIGKAKYLFSQIDPK 562 >gi|195335733|ref|XP_002034518.1| GM19865 [Drosophila sechellia] gi|194126488|gb|EDW48531.1| GM19865 [Drosophila sechellia] Length = 1022 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 124/528 (23%), Positives = 230/528 (43%), Gaps = 77/528 (14%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTT-----GTDEHGQKIAK 60 + I++A+ Y N PH+G+ ++ AD+ AR+ R G + LF GT + +A+ Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLFICGTDEYGTATENKALAE 315 Query: 61 AAQNAGVTTKVFVDQNS--------------RNFRDMADVLDISYDDFIRT----TEKRH 102 + K F N+ ++ D++ ++ D ++ TE Sbjct: 316 NLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITESVE 375 Query: 103 HDTC----RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH--NP 156 C R L + + + GC G+ R D+ K G+ NA P Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGC--GYEDARG------DQCDKC--GKLVNATELIRP 425 Query: 157 VQWMEEEGYFFRLSAYQDKL-LSYYESHPEFILPIERRN-------EVIS--FVKSGLKD 206 + R S D+L + ++ P+ +++ +VI+ ++K GLK Sbjct: 426 RCKVCNTAPVLRSS---DQLFIDLPKAEPQLKDWVDKSEGGWTHNAKVITRAWLKEGLKP 482 Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD---- 259 ++R WGI +P + + + YVW DA Y++ T ++W PA Sbjct: 483 RCITRD-LKWGIPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTK---EYQQWWQPAKGTDV 538 Query: 260 --LHVIGKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315 + KD + FH++ WP+ LL+ N L + + ++ ++ K SKS G + + Sbjct: 539 ELFQFMAKDNVPFHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGND 598 Query: 316 VIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +E G+ D R++L G+D + + L R N++L N +GN V+R++ K++ Sbjct: 599 A-QETGIPADVWRFYLASARPEGQDSSFSWNDLAVRNNSELLNNLGNFVNRALVFCEKNF 657 Query: 374 DGMIPTPGAFTESDESI-LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 +P T DE + L++ +R L+ +M+ + + ++++ + Y +Q+ Sbjct: 658 SSTVPE--VITTQDELVLLALINRELRGYINSMEKAKLRDGVRHLLAISRHGNGYMQSQQ 715 Query: 433 PWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 PW L K D RAST++ + V + LA LL ++P A +F L Sbjct: 716 PWNLLKGTDDQKKRASTIIGLCVNIACLLANLLFPYMPTTARTLFGQL 763 >gi|19074889|ref|NP_586395.1| METHIONYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1] gi|74697495|sp|Q8SQW5|SYMC_ENCCU RecName: Full=Probable methionyl-tRNA synthetase, cytoplasmic; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|19069614|emb|CAD25999.1| METHIONYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1] Length = 550 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 117/543 (21%), Positives = 223/543 (41%), Gaps = 53/543 (9%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K +I++A+ Y N QPH+G+ +++ DV +R+ + G ++ GTDE+G I A + Sbjct: 2 KKFITSALPYVNNQPHLGNIIGSVLSGDVYSRYCKKKGEVSVYICGTDEYGTAIEMEAIS 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GVT ++N + + + D +I +D F T+ H + L+ K+ D G + Sbjct: 62 QGVTPLEICEKNRKLHKQVYDWFNIDFDYFGFTSSATHTGLVQDLFMKMYDNGHFSEVEI 121 Query: 125 SGWYS-----------LRDEAYYNDDEVYKG----ADGQYYNA-----------QHNPVQ 158 +Y + E + D +G + G YN+ +PV Sbjct: 122 EQFYCEHCGLFLADRFIVGECKFCGDGRARGDQCDSCGHTYNSLELLSPRCSICSSSPVV 181 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWG 217 FF L A++ L Y ++ + +N ++ ++R F+WG Sbjct: 182 RATTH-LFFDLEAFRPSLEELYRTNGH-LWSQNAQNIFRQWISMEFYPRCMTRDLKFNWG 239 Query: 218 IKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI---GKDILRFHA 272 + +P + + + YVW DA YLT +L G W D ++ GKD + FH Sbjct: 240 VPVPLEKFKEKVFYVWFDAPIGYLT---FLKELVGEDFGEWCKDAELVQFMGKDNVAFHT 296 Query: 273 IYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL--RYF 328 + +PA L + P+ +++ + ++ + EK SKS + I ++++ + RY+ Sbjct: 297 VIFPAMLYATGEKYPVVRRLSATEYLQFENEKFSKSRRHGIFGLDLVGGGLGKSCMWRYY 356 Query: 329 LVR-EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 L++ KD + ++ V ADL N +GN V+R + I + + D Sbjct: 357 LLKIRPESTKDSNFTFSDFRQSVTADLINNLGNFVNRVLKYIQSKCNSRVSLL-ELDSGD 415 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 + + + + + + M+ + AL V+ + + Y + DR Sbjct: 416 KKCIEDVNELYCKYKAKMEEIKLREALQVVMEICRRGNEYIQE------GVRSRDRKGHF 469 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507 + +I + LL F+P + +IL + + R+ G + P+F Sbjct: 470 FCLGFSIIGLVGTLLHPFIPVTS---LEILRMCNLEETMFPESMRIVDGHTMGSDIRPLF 526 Query: 508 PRF 510 F Sbjct: 527 EDF 529 >gi|39973615|ref|XP_368198.1| hypothetical protein MGG_01046 [Magnaporthe oryzae 70-15] gi|145018000|gb|EDK02279.1| hypothetical protein MGG_01046 [Magnaporthe oryzae 70-15] Length = 700 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 128/548 (23%), Positives = 222/548 (40%), Gaps = 74/548 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +E + +++A+ Y N PH+G+ ++ ADV AR+ R GL L+ G+DE+G A Sbjct: 14 QENILVTSALPYVNNVPHLGNIIGSVLSADVFARYCRAKGLQTLYVCGSDEYGTATETKA 73 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GV + +++ D I +D F RT H + ++ K+ G I + Sbjct: 74 LEEGVDPATLCAKYHAVHKEIYDWFRIEFDVFGRTPTPEHTQIVQDIFSKLWKNGFIEQQ 133 Query: 123 CYSGWYSLRDE--AYYNDDEV--------YKGADGQYYNAQHNPVQWMEEE--------- 163 + R E + D V Y GA G +A N + ME + Sbjct: 134 ETVQAFCARPEHNTFLADRFVEGECSLCHYTGARGDQCDACGNLLDPMEPDKDSSAPAED 193 Query: 164 ------GY---------------------FFRLSAYQDKLLSYYESHPEFILPIERRNEV 196 G+ F RL A +D+++S+ + E + Sbjct: 194 DAQKATGWLINPKCKVDGSTPEKRRTRHLFLRLDALKDEIVSWLK-ETETGWSSNCVSIT 252 Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIP------DDPQY---IMYVWIDALTNYLTTTGYL-- 245 S++ GLK +SR WG+ IP D+ +Y + YVW DA Y + T Sbjct: 253 HSWIDKGLKPRGISRD-LKWGVPIPKGLDGLDEEEYARKVFYVWFDACIGYPSITKTYTD 311 Query: 246 -DNPDGSKAKFW---PADLHV---IGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFI 296 DN DG+ + W P ++ + +GKD + FH I +PA L P K + + ++ Sbjct: 312 KDNLDGNNWEKWWKNPENVKLYQFMGKDNVPFHTIIFPASQLGTRQPWTKVNHLSTTEYL 371 Query: 297 LHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 ++G K SKS G V + D RY+L+ D + + N DL Sbjct: 372 NYEGGKFSKSKGVGVFGNTAQSTGIDPDVWRYYLLSRRPESSDSEFKWEEFIDANNNDLL 431 Query: 356 NGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 +GNLV R V +P D+ V +++LQ+ N++ + Sbjct: 432 KNLGNLVQRVVKFAHAKMGAKVPEYAKKEVPTFDQHKAEV-NKLLQDYISNLKATKLRAG 490 Query: 414 LAQVISLVSEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 LA + + + ++ K +L +P+ + ++ + ++ + +A LL ++P A Sbjct: 491 LATTMLISALGNKLLQDHKLGNQLLDEDPELCNGLIALALDHLYLIASLLFPYMPGTARS 550 Query: 473 IFDILFVA 480 I + +A Sbjct: 551 ILRQIGLA 558 >gi|308125798|ref|ZP_07663527.1| methionine--tRNA ligase [Vibrio parahaemolyticus K5030] gi|308113929|gb|EFO51469.1| methionine--tRNA ligase [Vibrio parahaemolyticus K5030] Length = 330 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 83/306 (27%), Positives = 132/306 (43%), Gaps = 35/306 (11%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 12 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 71 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + + S + DIS+D++ T + + + ++ ++ G I S Sbjct: 72 GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 131 Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160 + E + D D+ D G+ Y+ NP + Sbjct: 132 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 191 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + E +FF L ++ L + S L E N++ + +SGL+ +SR +G +I Sbjct: 192 DSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEI 248 Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273 P + YVW+DA Y+ + L N D ++W D H IGKDI+ FH++ Sbjct: 249 PGEKDKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSL 308 Query: 274 YWPAFL 279 +WPA L Sbjct: 309 FWPAML 314 >gi|241153667|ref|XP_002407128.1| methionyl-tRNA synthetase, putative [Ixodes scapularis] gi|215494043|gb|EEC03684.1| methionyl-tRNA synthetase, putative [Ixodes scapularis] Length = 649 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 113/516 (21%), Positives = 225/516 (43%), Gaps = 52/516 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G Sbjct: 4 KGERNVLITSALPYVNNVPHLGNIVGSVLSADVFARYCRLRNWNTLYVCGTDEYGTATET 63 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A G+T + D+ ++ D+ +IS+D F RTT ++ + ++ K+ + Sbjct: 64 KALEMGITPREICDRFNKLHADIYKWFNISFDHFGRTTTEQQTKIAQDIFLKLHKNQYMR 123 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWMEEEGYFFR- 168 + + R E + D V Y+ A G + NP + + + Sbjct: 124 EEVVEQLFCNRCERFLADRFVEGTCPFCAYEDARGDQCDLCSKLINPTELKQARCKLCKE 183 Query: 169 ---LSAYQDKLLSYYESHPEFILPIERRNE---------VIS--FVKSGLKDLSLSRKTF 214 L + L + P F ++ E VI+ +V+ GLK ++R Sbjct: 184 PPVLKTSRHLFLDLPKLEPAFGEWYRKKTEGDEWTQTAKVITHAWVRDGLKPRCITRD-L 242 Query: 215 DWGIKIPDDPQYIMYVWIDALTNY---LTTTGY----LDNPDGSKAKFWPADL----HVI 263 WG +P ++ + D +T+Y LT + LD ++ D + Sbjct: 243 KWGTPVP------LHDYKDKVTSYAAFLTWAKFPQINLDVEKSAQVFQHKQDFVTLYQFM 296 Query: 264 GKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEV 320 KD + FH I +P L + + + ++ ++ K SKS G V + Sbjct: 297 AKDNVPFHGIVFPMTQLGTHEHYTTVDHLVAVEYLNYEDSKFSKSRGIGVFGNDAQDTGI 356 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 D R++L+ + +D + + L + N++L N +GN ++R+++ + ++ G++P Sbjct: 357 PADVWRFYLMYQRPEHQDTSFCWNDLLMKNNSELLNNLGNFINRALTFLSNNFGGIVPE- 415 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 E D+ +++ + +++ M + ++ ++S+ ++Y KPWEL K Sbjct: 416 LQLLEEDKVVIAKVASLVEHYVSLMDKVRLRDSIRCILSVSKVGNQYIQFNKPWELVKGT 475 Query: 441 PD---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 P R++TV+ ++ + L+ LLQ F+P+ + + Sbjct: 476 PAQKLRSATVIGLSANIACLLSGLLQPFMPETSEAL 511 >gi|303391413|ref|XP_003073936.1| methionyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506] gi|303303085|gb|ADM12576.1| methionyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506] Length = 543 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 125/544 (22%), Positives = 229/544 (42%), Gaps = 55/544 (10%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 K +I++A+ Y N QPH+G+ +++ DV +++ + G L+ GTDE+G I A + Sbjct: 2 KKFITSALPYVNNQPHLGNVIGSVLSGDVYSKYCKKKGETCLYICGTDEYGTAIEMEAVS 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG------- 117 G ++N R + + D +I +D F T+ H + + L+ K+ + G Sbjct: 62 QGRPPLEICEENRRLHKQVYDWFNIDFDYFGFTSTPEHTEMVQSLFMKMYNNGHFKELEI 121 Query: 118 -DIYKGCYSGWYSLR---DEAYYNDDEVYKG----ADGQYYN---------AQHNPVQWM 160 Y G + + R E + D KG A GQ YN + + V + Sbjct: 122 EQFYCGNCGIFLADRYVVGECKFCGDLGAKGDQCDACGQTYNFLELLSPKCSICSTVPII 181 Query: 161 EEEGY-FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWGI 218 + FF L ++ LL Y+ + + +N ++ ++R F WG+ Sbjct: 182 RSTCHLFFDLEMFRPHLLETYKENGH-LWSQNAQNIFNQWISMEFHPRCMTRDLKFRWGV 240 Query: 219 KIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAI 273 +P + + + YVW DA YLT L D S+ W D + +GKD + FH I Sbjct: 241 PVPLEKFKEKVFYVWFDAPIGYLTFLKELVGEDFSE---WCKDSELVQFMGKDNVAFHTI 297 Query: 274 YWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDAL-RYFL 329 +PA + + P+ K++ + ++ + +K SKS + I +++++ +G + RY+L Sbjct: 298 IFPAMIYATGEKYPIIKRLSATEYLQFENQKFSKSRRHGIFGLDLVKGNLGKPCIWRYYL 357 Query: 330 VR-EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 ++ KD + ++ V ADL N +GN V+R + I + + E D+ Sbjct: 358 MKIRPESTKDSNFTFYDFQQSVTADLINNLGNFVNRVLKYIESRCNSRVSLL-ELDEKDK 416 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 + + + + M + L V+ + + Y N R S Sbjct: 417 EFVEDINGLYRRYITKMDEIKLREGLQVVMEISRRGNEYIQE------GVRNKARKSHFF 470 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRLKPGFMLHKTFDPI 506 + V+ LA LL F+P + +I + + + Q +D G M+ P+ Sbjct: 471 CLGFSVVGFLATLLYPFMPVASVEILRMCNLEETGLPESIQIID-----GHMIGGRICPL 525 Query: 507 FPRF 510 F F Sbjct: 526 FENF 529 >gi|218513078|ref|ZP_03509918.1| methionyl-tRNA synthetase [Rhizobium etli 8C-3] Length = 80 Score = 104 bits (259), Expect = 4e-20, Method: Composition-based stats. Identities = 43/77 (55%), Positives = 57/77 (74%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M ++ YI+TAI+YPN +PHIGHAYE+I D +AR+ RLDG DV F TGTDEHGQK+ + Sbjct: 4 MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGRDVFFLTGTDEHGQKMQQ 63 Query: 61 AAQNAGVTTKVFVDQNS 77 A+ G+T + D+NS Sbjct: 64 TARAEGITAQALADRNS 80 >gi|254581556|ref|XP_002496763.1| ZYRO0D07568p [Zygosaccharomyces rouxii] gi|238939655|emb|CAR27830.1| ZYRO0D07568p [Zygosaccharomyces rouxii] Length = 751 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 113/520 (21%), Positives = 215/520 (41%), Gaps = 53/520 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + + I++A+ Y N PH+G+ ++ AD+ AR+ + + LF GTDE+G Sbjct: 192 KGEKNIIITSALPYVNNVPHLGNIVGSVLSADIFARYCKARNYNTLFICGTDEYGTATET 251 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A VT + + +++ D + +D F RTT + + ++ K++D G + Sbjct: 252 KALEEKVTPLELCTKYHKIHKEVYDWFQVGFDYFGRTTTPLQTEIAQDIFSKLNDNGFLE 311 Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME----------- 161 + Y ++ D V Y+ A G + + E Sbjct: 312 EQTMKQLYCPVHNSFLADRFVEGECPKCHYEDARGDQCDKCGGLLDPFELINPRCKLDNA 371 Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTF 214 + F L + ++ + E + + S++K GL+ ++R Sbjct: 372 EPEVKYSDHIFLSLDKLEGRVADWVNKKSEEGFWSKNSKTITQSWLKDGLRPRCITRDLI 431 Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDI 267 WG +P + ++YVW DA YL+ T N K+W P D+++ +GKD Sbjct: 432 -WGTPVPLEKYKDKVLYVWFDATIGYLSITA---NYTKHWQKWWKNPEDVNLYQFMGKDN 487 Query: 268 LRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324 + FH + +PA + + + + ++ ++G K SKS V V Sbjct: 488 VPFHTVIFPASQIGTGDQWTMLHHLNTTEYLQYEGGKFSKSRNIGVFGNNAKDSGVSPSV 547 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP------ 378 RY+L D + D + N++L +GN V+R V + Y+G++P Sbjct: 548 WRYYLTSVRPESSDSHFSWDDFVTKNNSELLANLGNFVNRLVKFVNAKYNGVVPDYDVKN 607 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELK 437 PG +S+ S S++L M+ R L +SL + +++ + L Sbjct: 608 LPGF-----DSLKSDISQILGSYIAEMEPAHERRGLELAMSLSARGNQFLQENRLDNNLF 662 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P ++ V+ V + ++ +A ++ F+P+ A KI+ +L Sbjct: 663 SNFPAKSDAVVGVGLNIVYAVASVIGPFLPEAAEKIYRML 702 >gi|147898905|ref|NP_001086723.1| methionyl-tRNA synthetase [Xenopus laevis] gi|50603650|gb|AAH77353.1| Mars-prov protein [Xenopus laevis] Length = 905 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 83/329 (25%), Positives = 162/329 (49%), Gaps = 24/329 (7%) Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLT-TTGYLDNPDGSKAK 254 S+++ GLK ++R WG +P D + YVW DA Y++ T Y D + Sbjct: 482 SWIRDGLKPRCITRD-LKWGTPVPLDGFRDKVFYVWFDAPIGYISITANYTDQWE----M 536 Query: 255 FWPADLHV-----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSL 307 +W + V + KD + FH++ +P+ LL A N L + + ++ ++ K SKS Sbjct: 537 WWKSPQQVQLYNFMAKDNVPFHSVIFPSCLLGAEDNYTLVNHLVATEYLNYEDGKFSKSR 596 Query: 308 GNVIDPIEVIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 G + ++ +E G+ D R++L+ G+D + L + N++L N +GN V+R+ Sbjct: 597 GVGVFG-DMAQETGIPADIWRFYLLYVRPEGQDSAFSWSDLMLKNNSELLNNLGNFVNRA 655 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 + K ++G +P +E D+ +L+ + LQ+ + ++ I AL ++++ + Sbjct: 656 AMFVQKFFNGCVPEMELLSE-DKRLLAQVAAELQQFNQLLEKVRIRDALRCILNISRHGN 714 Query: 426 RYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 +Y +PW+ K N + RA TV V V + L+++L ++P ++ I + L + E Sbjct: 715 QYIQVNEPWKCIKGNQEEQKRAGTVTGVAVNMAALLSVMLHPYMPTISGVIQEQLLMPQE 774 Query: 483 NRCFQS-LDQRLKPGFMLHKTFDPIFPRF 510 ++ + RL+ G + P+F + Sbjct: 775 SKVLTTDFCCRLQSGHRIGNV-SPLFQKL 802 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 2/96 (2%) Query: 3 EREK-LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 E EK + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G Sbjct: 259 EGEKNILITSALPYVNNVPHLGNIIGSVLSADVFARYCRLRNWNTLYICGTDEYGTATET 318 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96 A G+T + D+ + + +IS+D F R Sbjct: 319 KAMEEGLTPQQICDKYNAVHTAIYQWFNISFDYFGR 354 >gi|195487299|ref|XP_002091851.1| GE13875 [Drosophila yakuba] gi|194177952|gb|EDW91563.1| GE13875 [Drosophila yakuba] Length = 1021 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 124/528 (23%), Positives = 230/528 (43%), Gaps = 77/528 (14%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTT-----GTDEHGQKIAK 60 + I++A+ Y N PH+G+ ++ AD+ AR+ R G + L GT + +A+ Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTDEYGTATENKALAE 315 Query: 61 AAQNAGVTTKVFVDQNS--------------RNFRDMADVLDISYDDFIRT----TEKRH 102 + K F N+ ++ D++ ++ D ++ TE Sbjct: 316 NLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITESVE 375 Query: 103 HDTC----RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH--NP 156 C R L + + + GC G+ R D+ K G+ NA P Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGC--GYEDARG------DQCDKC--GKLVNATELIRP 425 Query: 157 VQWMEEEGYFFRLSAYQDKL-LSYYESHPEFILPIERRN-------EVIS--FVKSGLKD 206 + R S D+L + ++ P+ +++ +VI+ ++K GLK Sbjct: 426 RCKVCNSAPVLRSS---DQLFIDLPKAEPQLKDWVDKSEGGWTHNAKVITRAWLKEGLKP 482 Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD---- 259 ++R WGI +P + + + YVW DA Y++ T ++W PA Sbjct: 483 RCITRD-LKWGIPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTK---EYQQWWQPAKGTDV 538 Query: 260 --LHVIGKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315 + KD + FH++ WP+ LL+ N L + + ++ ++ K SKS G + + Sbjct: 539 ELFQFMAKDNVPFHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGND 598 Query: 316 VIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +E G+ D R++L G+D + + L R N++L N +GN V+R++ K++ Sbjct: 599 A-QETGIPADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNF 657 Query: 374 DGMIPTPGAFTESDESI-LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 + IP T DE + L++ +R L+ +M+ + + ++++ + Y +Q+ Sbjct: 658 NSTIPE--VITTQDELVLLALINRELRGYINSMEKAKLRDGIRHLLAISRHGNGYMQSQQ 715 Query: 433 PWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 PW L K D RAST++ + V + LA LL ++P A +F L Sbjct: 716 PWVLLKGTDDQKKRASTIIGLCVNIACLLANLLFPYMPSTARTLFGQL 763 >gi|58266864|ref|XP_570588.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134110666|ref|XP_776160.1| hypothetical protein CNBD2070 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258828|gb|EAL21513.1| hypothetical protein CNBD2070 [Cryptococcus neoformans var. neoformans B-3501A] gi|57226821|gb|AAW43281.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 724 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 119/543 (21%), Positives = 214/543 (39%), Gaps = 80/543 (14%) Query: 4 REKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ + ADV AR++R + L+ GTDE+G A Sbjct: 30 QRNVLITSALPYVNNVPHLGNIIGSTLSADVFARYNRTLNVPTLYICGTDEYGTATETKA 89 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GVT + + ++ + IS+D + RT+ H + + +++++ D G Sbjct: 90 LEEGVTPYELCTKFHKLHTEIYEWFQISFDKWGRTSSPEHTEITQGIYRRLHDNGLFRLE 149 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH----NPVQWMEEEG------ 164 Y + D+ + D V Y A G + +P Q + Sbjct: 150 TTDQTYCVDDKLFLADRFVEGICPNCGYDDARGDQCDKCSLTFSSPTQLLNPRCKRNKAH 209 Query: 165 ---------YFFRLSAYQDKLLSYYESHP-----EFILPIERRNEVIS--FVKSGLKDLS 208 +RL Q +L+ + + I + E++ + GL+ + Sbjct: 210 TLSVRPSTHACYRLDLLQPRLVEWMQKARVKGKWGTNAVITEKGEIVEPRMLGEGLRPSA 269 Query: 209 LSRKTFDWGIKIP---DDPQ------YIMYVWIDALTNYLTTTG--------YLDNPDGS 251 ++R WG+++P D+ + ++YVW DA Y + T + NPD Sbjct: 270 VTRD-LKWGVEVPKVGDEEEDKAMEGKVIYVWFDAPIGYPSITATYTEEWEKWWKNPDNV 328 Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--- 306 + +GKD + FH + +PA LL + + S ++ ++ K SKS Sbjct: 329 EL------YQFMGKDNVYFHTVLFPAMLLGTEERWTMLHNISSTQYLNYEDTKFSKSRNV 382 Query: 307 --LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 GN E+ RY+L+ + D + N +L +GN V+R Sbjct: 383 GVFGNNARETGQPPEI----WRYYLISQRPENSDSSFLWSKFIAANNNELLANLGNFVNR 438 Query: 365 SVSMILKDYDGMIPTPGAFTES---------DESILSVCSRVLQEIRENMQNQLIHRALA 415 V I D +P P F D ++ + L+E RE M + + LA Sbjct: 439 VVKFINAKLDSKVPGPEDFAGGEVAPPADSLDVDFVTDVNTRLKEYREQMDDTKLRGGLA 498 Query: 416 QVISLVSEVDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 ++L + ++Y L +NP R + VL V +I L+++ F+P + I Sbjct: 499 TAMALSARGNQYLQENSLDNALLASNPKRCAEVLLNAVNLIYVLSVVFHPFMPNTSEGIL 558 Query: 475 DIL 477 L Sbjct: 559 RQL 561 >gi|325095468|gb|EGC48778.1| methionyl-tRNA synthetase [Ajellomyces capsulatus H88] Length = 637 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 131/564 (23%), Positives = 243/564 (43%), Gaps = 70/564 (12%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLAR--FHRLDGLDVLFTTGTDEHGQKIA 59 K + + I++A+ Y N PH+G+ I+ VL+ + + G L+ GTDE+G Sbjct: 11 KGQRNILITSALPYVNNVPHLGN----IVGSVLSADVYQKACGRPTLYICGTDEYGTATE 66 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A GVT + + ++ +++ + +I +D F RT +H + + ++K++ D G + Sbjct: 67 TKALEEGVTPEELCAKYNKIHQEVYEWFEIGFDIFGRTPTAQHTEISQAIFKRLYDNGFL 126 Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEE 162 + + + +++ D V Y A G Q H NP ++ Sbjct: 127 EEKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLDG 186 Query: 163 EGYFFRLSAY----QDKLLSYYES--HPEFI---LPIERRNEVISFVKSGLKDLSLSRKT 213 R + + DKL E+ HP P R S++K GLKD ++R Sbjct: 187 ATPVRRNTKHIHLLLDKLQPEIEAWVHPAIEKGDWPKNSRVITESWLKEGLKDRGITRD- 245 Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IGK 265 WG+ +P D + ++YVW +A Y + T PD + W P ++ + +GK Sbjct: 246 LKWGVPVPLDGYEKKVLYVWFEACIGYPSITANY-TPD---WELWWRDPDNVQLYQFLGK 301 Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 D + FH++ +P + K + + ++ ++ K SKS G + E V Sbjct: 302 DNVPFHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKETGVPA 361 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTP 380 D RY+L++ D ++ N +L +GNLV+R V +I K Y +P Sbjct: 362 DVWRYYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSTVPD- 420 Query: 381 GAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELK 437 FT E + +L + +L++ M+ + +A + +V + + K L Sbjct: 421 --FTVPEPFKPVLGEVTTLLRQYITEMEGVHLRAGVATAMRIVEVGNGLIQSNKLDNSLI 478 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ------ 491 + P+RA++V+ + + +I ++ + ++P + I + L V N SLD+ Sbjct: 479 ASEPERAASVVGIVINLIHLISSIFSPYLPATSASILEQLNVPFAN--IPSLDELKDEGW 536 Query: 492 ---RLKPGFMLHKT---FDPIFPR 509 +KPG + K F I P+ Sbjct: 537 KPALIKPGHQIGKAKYLFSQIDPK 560 >gi|225557737|gb|EEH06022.1| methionyl-tRNA synthetase [Ajellomyces capsulatus G186AR] Length = 638 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 131/564 (23%), Positives = 243/564 (43%), Gaps = 70/564 (12%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLAR--FHRLDGLDVLFTTGTDEHGQKIA 59 K + + I++A+ Y N PH+G+ I+ VL+ + + G L+ GTDE+G Sbjct: 11 KGQRNILITSALPYVNNVPHLGN----IVGSVLSADVYQKACGRPTLYICGTDEYGTATE 66 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A GVT + + ++ +++ + +I +D F RT +H + + ++K++ D G + Sbjct: 67 TKALEEGVTPEELCAKYNKIHQEVYEWFEIGFDIFGRTPTAQHTEISQAIFKRLYDNGFL 126 Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEE 162 + + + +++ D V Y A G Q H NP ++ Sbjct: 127 EEKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLDG 186 Query: 163 EGYFFRLSAY----QDKLLSYYES--HPEFI---LPIERRNEVISFVKSGLKDLSLSRKT 213 R + + DKL E+ HP P R S++K GLKD ++R Sbjct: 187 ATPVRRNTKHIHLLLDKLQPEIEAWVHPAIEKGDWPKNSRVITESWLKEGLKDRGITRD- 245 Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IGK 265 WG+ +P D + ++YVW +A Y + T PD + W P ++ + +GK Sbjct: 246 LKWGVPVPLDGYEKKVLYVWFEACIGYPSITANY-TPD---WELWWRDPDNVQLYQFLGK 301 Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 D + FH++ +P + K + + ++ ++ K SKS G + E V Sbjct: 302 DNVPFHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKETGVPA 361 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTP 380 D RY+L++ D ++ N +L +GNLV+R V +I K Y +P Sbjct: 362 DVWRYYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSTVPD- 420 Query: 381 GAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELK 437 FT E + +L + +L++ M+ + +A + +V + + K L Sbjct: 421 --FTVPEPFKPVLGEITTLLRQYITEMEGVHLRAGVATAMRIVEVGNGLIQSNKLDNSLI 478 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ------ 491 + P+RA++V+ + + +I ++ + ++P + I + L V N SLD+ Sbjct: 479 ASEPERAASVVGIVINLIHLISSIFSPYLPATSASILEQLNVPFAN--IPSLDELKDGGW 536 Query: 492 ---RLKPGFMLHKT---FDPIFPR 509 +KPG + K F I P+ Sbjct: 537 KPALIKPGHQIGKAKYLFSQIDPK 560 >gi|295674507|ref|XP_002797799.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] gi|226280449|gb|EEH36015.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] Length = 653 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 126/539 (23%), Positives = 237/539 (43%), Gaps = 54/539 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLAR--FHRLDGLDVLFTTGTDEHGQKI 58 +K + + I++A+ Y N PH+G+ I+ VL+ + + G LF GTDE+G Sbjct: 10 VKGQRNILITSALPYVNNVPHLGN----IVGSVLSADVYQKACGRPTLFVCGTDEYGTAT 65 Query: 59 AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 A GVT + + ++ +++ + +I +D F RT +H + + ++K++ + G Sbjct: 66 ETKALEEGVTPEELCAKYNKIHQEVYEWFEIGFDIFGRTPTAQHTEISQSIFKRLHENGF 125 Query: 119 IYKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWME 161 + + + + +++ D V Y A G Q H NP ++ Sbjct: 126 LEEKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLD 185 Query: 162 EEGYFFRLSAYQDKLLSYYESH-PEFILP-IERRN-----EVI--SFVKSGLKDLSLSRK 212 R + + LL + E++ P IE+ N VI S++K GLKD ++R Sbjct: 186 GATPVRRPTKHIHILLDKLQPEIEEWVHPAIEKGNWPKNSRVITESWLKEGLKDRGITRD 245 Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IG 264 WG+ +P D + ++YVW +A Y + T PD + W P ++ + +G Sbjct: 246 -LKWGVPVPLDGYEKKVLYVWFEACIGYPSITANY-TPD---WELWWRDPDNVQLYQFLG 300 Query: 265 KDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321 KD + FH++ +P + K + + ++ ++ K SKS G V + Sbjct: 301 KDNVPFHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKDTGIP 360 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPT 379 D RY+L++ D ++ N +L +GNLV+R V +I K Y ++P Sbjct: 361 PDVWRYYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSVVPE 420 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKK 438 TE + L + +L++ M++ + L + +V + A K L Sbjct: 421 -FTVTEPFKPALEEITALLRQYISEMESVHLRAGLVTAMKIVEVGNGLIQANKLDNSLIA 479 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497 P+RA++V+ + V +I ++ + ++P + I L V N SLD+ + G+ Sbjct: 480 NEPERAASVVGIVVNLIYLISSIFSPYLPATSASILAQLNVPFRN--IPSLDELKEGGW 536 >gi|169859193|ref|XP_001836237.1| methionyl tRNA synthetase [Coprinopsis cinerea okayama7#130] gi|116502714|gb|EAU85609.1| methionyl tRNA synthetase [Coprinopsis cinerea okayama7#130] Length = 718 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 120/547 (21%), Positives = 217/547 (39%), Gaps = 79/547 (14%) Query: 2 KEREK-LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 K+ EK + I++A+ Y N PH+G+ + ADV +R+ R L+ GTDE+G Sbjct: 26 KDGEKNILITSALPYCNNVPHLGNIIGSTLSADVFSRYSRTRNQRTLYVCGTDEYGTATE 85 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A G+T + D+ + + DI +D F RT+ H D + ++ + G + Sbjct: 86 TQALKEGITPRELCDKYYVLHKATYEWFDIGFDHFGRTSTPYHTDISQEIFLNLGKNGFL 145 Query: 120 ------------------YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQ 153 Y CY + ++ + + D V Y+ A G + Sbjct: 146 EKQEKEQVYCEGCPKYVYYTSCYGSFANVALDRFLADRYVEGVCPHCGYEDARGDQCDGC 205 Query: 154 HNPVQWME------------------EEGYFFRLSAYQDKLLSYYESH-------PEFIL 188 + +E + +L+ Q K + +S P + Sbjct: 206 SRTLDAVELIKPRCLVDKTHKVTTKLSSHMYLKLNEIQPKTEEWIKSSWKKGKWSPNAV- 264 Query: 189 PIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQ-------YIMYVWIDALTNYLT 240 I E+I + +K GL L+R WG+ +P + + ++YVW DA Y + Sbjct: 265 -INGDGEIIDARLKMGLLPTPLTRD-LKWGVPVPIEGEDVHGMKDKVLYVWFDAPIGYPS 322 Query: 241 TTGYLDNPDGSKAKFWPADL---HVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGF 295 T L P+ + P ++ +GKD + FH +YWP+ + K + + + Sbjct: 323 ITANL-TPEWKQWWLNPENVDLYQFMGKDNVYFHTVYWPSVQIGDGRNWTKLHHLSTTEY 381 Query: 296 ILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + ++G K SKS V P + RY+L+ D + N L Sbjct: 382 LNYEGGKFSKSKNRGVFGPAAKDTGIPASVWRYYLLSTRPETADAMFSWSDCVAANNNVL 441 Query: 355 ANGIGNLVSRSVSMILKDYDGMIP----TPGAFTESDE---SILSVCSRVLQEIRENMQN 407 N GN V+R++ I Y G+IP PG ++ +DE + + +L++ + M Sbjct: 442 LNNFGNFVNRALKFISSQYGGVIPDSEDAPGPYSPNDEVDGEFFTHVNSLLKDYIDAMDA 501 Query: 408 QLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466 + L V+ + ++ + Y + L + P R + V+ +I L++L+ F+ Sbjct: 502 VKLRLGLQTVMLISAQGNNYLQSSGLNKALMTSKPKRCAQVVSRAANLIYLLSVLIHPFM 561 Query: 467 PKLANKI 473 P I Sbjct: 562 PATGAAI 568 >gi|297605899|ref|NP_001057729.2| Os06g0508700 [Oryza sativa Japonica Group] gi|255677088|dbj|BAF19643.2| Os06g0508700 [Oryza sativa Japonica Group] Length = 727 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 99/436 (22%), Positives = 193/436 (44%), Gaps = 56/436 (12%) Query: 87 LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV----- 141 DI +D F RT+ + + C+ +++K+ + + + Y + + D V Sbjct: 25 FDIKFDKFGRTSSPQQTEVCQAIFQKLMENNWLTENTMQQLYCDTCQRFLADRLVEGKCP 84 Query: 142 -----YKGADG-QYYNAQH--NPVQWMEEEG--------------YFFRLSAYQDKLLSY 179 Y+ A G Q N NP + ++ + F L DKL++Y Sbjct: 85 TEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCKNTPRVRDTDHLFLELPLLSDKLVNY 144 Query: 180 Y-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALT 236 E+ + +++K GLK ++R WG+ +P + + YVW DA Sbjct: 145 INETSVAGMWSQNAIQATNAWLKEGLKPRCITRD-LKWGVPVPHEKYKDKVFYVWFDAPI 203 Query: 237 NYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDILRFHAIYWPAFLLSAN--LPLPKK 289 Y++ T PD K +W P ++ + +GKD + FH + +P+ LL + K Sbjct: 204 GYVSITASY-TPDWEK--WWKDPDNVELFQFMGKDNVPFHTVMFPSTLLGTGEKWTMMKT 260 Query: 290 VFSHGFILHKGEKISKS-----LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 + ++ ++ K SKS GN + EV RY+L+ D + Sbjct: 261 ISVTEYLNYEAGKFSKSHGIGVFGNDAKDTNIPPEV----WRYYLLTNRPEVSDTLFTWA 316 Query: 345 GLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP-TPGAFTES-DESILSVCSRVL 398 L+ ++N++L N +GN ++R +S + K YD ++P P A + ++++ ++ + Sbjct: 317 DLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSIVPDAPNAESHPLTKALVEKTNKWV 376 Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 ++ E M+ + + L + + S+ + Y + W+L K +P + V+ +V V+ L Sbjct: 377 EQYLEAMEKVKLKQGLKSAMGISSDGNAYLQESQFWKLYKEDPAACAVVMKTSVGVVYLL 436 Query: 459 AILLQAFVPKLANKIF 474 A LL+ F+P +N++ Sbjct: 437 ACLLEPFMPSFSNEVL 452 >gi|195584739|ref|XP_002082162.1| GD25352 [Drosophila simulans] gi|194194171|gb|EDX07747.1| GD25352 [Drosophila simulans] Length = 1022 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 123/528 (23%), Positives = 229/528 (43%), Gaps = 77/528 (14%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTT-----GTDEHGQKIAK 60 + I++A+ Y N PH+G+ ++ AD+ AR+ R G + L GT + +A+ Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTDEYGTATENKALAE 315 Query: 61 AAQNAGVTTKVFVDQNS--------------RNFRDMADVLDISYDDFIRT----TEKRH 102 + K F N+ ++ D++ ++ D ++ TE Sbjct: 316 NLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITESVE 375 Query: 103 HDTC----RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH--NP 156 C R L + + + GC G+ R D+ K G+ NA P Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGC--GYEDARG------DQCDKC--GKLVNATELIRP 425 Query: 157 VQWMEEEGYFFRLSAYQDKL-LSYYESHPEFILPIERRN-------EVIS--FVKSGLKD 206 + R S D+L + ++ P+ +++ +VI+ ++K GLK Sbjct: 426 RCKVCNTAPVLRSS---DQLFIDLPKAEPQLKDWVDKSEGGWTHNAKVITRAWLKEGLKP 482 Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD---- 259 ++R WGI +P + + + YVW DA Y++ T ++W PA Sbjct: 483 RCITRD-LKWGIPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTK---EYQQWWQPAKGTDV 538 Query: 260 --LHVIGKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315 + KD + FH++ WP+ LL+ N L + + ++ ++ K SKS G + + Sbjct: 539 ELFQFMAKDNVPFHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGND 598 Query: 316 VIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +E G+ D R++L G+D + + L R N++L N +GN V+R++ K++ Sbjct: 599 A-QETGIPADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNF 657 Query: 374 DGMIPTPGAFTESDESI-LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 +P T DE + L++ +R L+ +M+ + + ++++ + Y +Q+ Sbjct: 658 SSTVPE--VITTQDELVLLALINRELRGYINSMEKAKLRDGVRHLLAISRHGNGYMQSQQ 715 Query: 433 PWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 PW L K D RAST++ + V + LA LL ++P A +F L Sbjct: 716 PWSLLKGTDDQKKRASTIIGLCVNIACLLANLLFPYMPTTARTLFGQL 763 >gi|213618743|ref|ZP_03372569.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 239 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 7/213 (3%) Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323 GKDI+ FH+++WPA L ++ P +F HG++ G K+SKS G I ++ D Sbjct: 1 GKDIVYFHSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDAD 60 Query: 324 ALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 +LRY+ +++ D + + +RVNAD+ N + NL SR+ I K +DG++ A Sbjct: 61 SLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLAAELA 120 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442 D + + I E +++ +A+ ++++L +RY D Q PW + K Sbjct: 121 ----DPQLYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGR 176 Query: 443 RA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473 A + + + + R L L+ +P L+ ++ Sbjct: 177 DADLQAICSMGINLFRVLMTYLKPVLPTLSERV 209 >gi|254419987|ref|ZP_05033711.1| methionyl-tRNA synthetase [Brevundimonas sp. BAL3] gi|196186164|gb|EDX81140.1| methionyl-tRNA synthetase [Brevundimonas sp. BAL3] Length = 572 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 115/517 (22%), Positives = 208/517 (40%), Gaps = 50/517 (9%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGL------DVLFTTGTDEHGQKI 58 ++ I++A+ Y N H+G+ A M+ ADV ARF R L +VL+ TDEHG Sbjct: 3 RILITSALPYINGIKHLGNLAGSMLPADVWARFKRAQVLPDGSRHEVLYICATDEHGTPA 62 Query: 59 AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 AA AG + + D+ + +SYD F R++ ++H + + + G Sbjct: 63 ELAAAAAGQDVRTYCDEQHEIQKAAGQAFGLSYDWFGRSSNPQNHRLTQHFAEALEKNGL 122 Query: 119 IYKGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173 I + YS+ D + D V + G G + N + ++ S+ Sbjct: 123 IEERVDRMIYSIDDARFLPDRYVEGTCPHCGHVGARGDQCDNCGRLLDPTDLIDPYSSVS 182 Query: 174 -DKLLSYYESHPEFILPIERRNEVISFVKS------------------GLKDLSLSRKTF 214 K L ++ ++L ++ ++V S GL D ++R Sbjct: 183 GSKNLEVRDTRHLYLLQTRIEPQIRAWVDSKTGWQVLAKSIAYKHLDEGLIDRGITRD-L 241 Query: 215 DWGIKI-------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPAD------- 259 WG+ + P + YVW DA Y+ T + + GS +W D Sbjct: 242 AWGVPVLKDGFPRPGMEDKVFYVWFDAPIEYIAATEEWAEATGGSWRDWWRLDEGAEDVR 301 Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEV 316 + +GKD + FH + +PA ++ + P ++ + ++ G K S S + + Sbjct: 302 YVQFMGKDNVAFHTVSFPATIIGSGEPWKTVDQLKAFNWLNWYGGKFSTSQKRGVFMDQA 361 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 +E + D R+ L D + + + N DLA+ +GN V+R V +DG+ Sbjct: 362 LELLPADYWRWRLTAYGPEHADSAFTWEDFQASTNKDLADVLGNFVNRIVKFAESKFDGV 421 Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 +P G + + + + E E + +A + + ++ + Y PW Sbjct: 422 VPEGGEAGPVEIQLEADIKAGIAEATEQFEAMEFRKAASALRAVWVLGNEYLQVAAPWTA 481 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 KT+ DRA+ + + ++ A L +P A KI Sbjct: 482 LKTDRDRAAVGVRTGLNLVALFARLAAPILPFSAEKI 518 >gi|213403284|ref|XP_002172414.1| methionyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275] gi|212000461|gb|EEB06121.1| methionyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275] Length = 781 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 120/537 (22%), Positives = 225/537 (41%), Gaps = 70/537 (13%) Query: 1 MKEREK-----------LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFT 48 M+ER+K + I++A+ Y N PH+G+ + ADV AR+HR L+ Sbjct: 207 MQERKKSGVLPKPNSRNILITSALPYVNNVPHLGNIIGSTLSADVFARYHRARNNTTLYI 266 Query: 49 TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108 GTDE+G A GV+ K D+ + +++ D + +D F RTT + + + Sbjct: 267 CGTDEYGTATETKALEEGVSPKELCDKYHKLHKEVYDWFQLDFDFFGRTTTPKQTEISQH 326 Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK-----GAD----------GQYYNA- 152 ++ ++ ++ + + Y + + D V G D GQ NA Sbjct: 327 IFNRLYERDYMEVDSMTQLYCEEHKGFLADRYVEGTCPKCGFDDARGDQCDGCGQLLNAF 386 Query: 153 ----------QHNPVQWMEEEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVK 201 + PV+ E F L Q ++ +++ S E S++K Sbjct: 387 ELINPTCKLDKTTPVK-RETRHIFLSLDKLQPQIQEWFQKSSKEGHWSNNGVAITDSWLK 445 Query: 202 SGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLD-------NPDGS 251 GL+ ++R WG +P + ++YVW DA Y++ T Y D NP+ Sbjct: 446 EGLRPRCITRD-LKWGTPVPLEEFKDKVLYVWFDATIGYISITANYTDEWKQWWKNPENV 504 Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGN 309 K +GKD + FH + +P LL + + + + ++ ++ K SKS G Sbjct: 505 KL------YQFMGKDNVPFHTVIFPGSLLGTDEKWTMLHHINTTDYLNYESGKFSKSRGI 558 Query: 310 VIDPIEVIEEVGVD--ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 + +E+G+ RY+L+ D + R N++L IGNLV+R V Sbjct: 559 GVFGNNA-KELGLSPSVWRYYLLASRPETSDTMFTWKEFITRHNSELLANIGNLVNRVVK 617 Query: 368 MILKDYDGMIP------TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 Y+G++P + G+ E + V + +L++ ++ + L + L Sbjct: 618 FTTAKYNGLVPYYLEDASVGSGKLKTELVKDV-NAILRKYNTALEAVKLREGLRIAMELS 676 Query: 422 SEVDRYF-DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + +++ D + +L + + + T+ ++ LA +L F+P ++ I+ L Sbjct: 677 ARGNQFLQDNRVDNKLFTNERQKCADAIGYTLNLVYLLASILSPFIPATSDSIYKQL 733 >gi|45201428|ref|NP_986998.1| AGR332Cp [Ashbya gossypii ATCC 10895] gi|44986362|gb|AAS54822.1| AGR332Cp [Ashbya gossypii ATCC 10895] Length = 750 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 115/519 (22%), Positives = 221/519 (42%), Gaps = 54/519 (10%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ER L +++A+ Y N PH+G+ ++ AD+ AR+ + + LF GTDE+G Sbjct: 193 ERNVL-VTSALPYVNNVPHLGNIVGSVLSADIYARYCKARNYNTLFICGTDEYGTATETK 251 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A G++ + D+ + D+ +I +D F RTT + + ++ K+++ G + + Sbjct: 252 ALEEGISPRELCDKFHKIHADVYKWFNIGFDYFGRTTTAAQTEIAQDIFNKLNENGYLEE 311 Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYN---AQHNPVQWME--------- 161 Y A+ D V Y+ A G + A +P + + Sbjct: 312 KTMKQLYCSEHNAFLADRYVEGECPKCQYEDARGDQCDKCGALLDPFELVNPRCKLDNTK 371 Query: 162 -----EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 + F L+ + + + ES + R S++K GL+ ++R Sbjct: 372 PEPRTSDHIFLSLNKLEKDIAQWVAESSEKGNWSKNSRTITNSWLKEGLEPRCITRDLV- 430 Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDIL 268 WG +P + + ++YVW DA Y + T N ++W P ++ + +GKD + Sbjct: 431 WGTPVPLEKYKEKVLYVWFDATIGYSSITA---NYTKEWERWWKNPENVSLYQFMGKDNV 487 Query: 269 RFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDAL 325 FH + +P L + + + ++ ++G K SKS G V + D Sbjct: 488 PFHTVIYPGSQLGTGDKWTMLHHLNTTEYLQYEGGKFSKSRGVGVFGNNAKDTGIPPDVW 547 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT------ 379 RY+L D + + + N++L +GN V+R V + Y+ ++P+ Sbjct: 548 RYYLASVRPETSDSQFSWKDMVTKNNSELLANLGNFVNRLVKFVNAKYNRVVPSFNVDNL 607 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKK 438 PG F + + I + S + E M+ R L ++L + +++ K L Sbjct: 608 PG-FKQLTDDINHILSNYVAE----MELAREKRGLELAMALSARGNQFLQENKLDNSLFS 662 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +PD++ V+ V + +I +A ++ F+P+ A I +L Sbjct: 663 QSPDKSDAVVGVGLNIIYAVASVIAPFMPQTAETINRML 701 >gi|331247159|ref|XP_003336209.1| methionyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309315199|gb|EFP91790.1| methionyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 188 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 1/106 (0%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFT-TGTDEHGQKIAKAAQNA 65 Y+ST I Y N+ PHIGH + M+IADVL R+++L F TGTDEHG K+ +AA+N Sbjct: 78 FYVSTPIFYVNSVPHIGHLHSMVIADVLGRYNQLKTDTPSFMLTGTDEHGSKVQRAAENN 137 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111 + + + S FR +A ++ YDDFIRTTE RHH + LW+ Sbjct: 138 RQSPQELCEAVSDRFRQLARAANVKYDDFIRTTEPRHHRAAQHLWE 183 >gi|261198955|ref|XP_002625879.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] gi|239595031|gb|EEQ77612.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] gi|327350782|gb|EGE79639.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188] Length = 646 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 129/571 (22%), Positives = 243/571 (42%), Gaps = 72/571 (12%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD---------GLDVLFTTGT 51 K + I++A+ Y N PH+G+ ++ ADV A + L G L+ GT Sbjct: 11 KGERNILITSALPYVNNVPHLGNIVGSVLSADVFASYVALPYIKAKKKACGRPTLYVCGT 70 Query: 52 DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111 DE+G A GVT + + ++ R++ + +I +D F RT +H + + ++K Sbjct: 71 DEYGTTTETKALEEGVTPEELCAKYNKLHREVYEWFEIGFDVFGRTPTAQHTEISQEIFK 130 Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEE 163 ++ + G + + + + +++ D V Y A G + N + E + Sbjct: 131 RLYENGFLTEKTAEHPFCEKHDSFLADRYVEGECPRCAYNDARGDQCDKCGNLLDPFELK 190 Query: 164 GYFFRLSAYQ-------------DKLLSYYES--HPEFI---LPIERRNEVISFVKSGLK 205 +L DKL E+ HP P R S++K GLK Sbjct: 191 NPRCKLDGATPVLRNTRHIYLMLDKLQPEIEAWVHPAIEKGDWPKNSRVITESWLKEGLK 250 Query: 206 DLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADL 260 D ++R WG+ +P + + ++YVW +A Y + T PD + W P ++ Sbjct: 251 DRCITRDV-KWGVPVPLEGYEKKVLYVWFEACIGYPSITANY-TPDW---ELWWRDPDNV 305 Query: 261 HV---IGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIE 315 + +GKD + FH++ +P + K + + ++ ++ K SKS G + + Sbjct: 306 QLYQFLGKDNVPFHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFG-D 364 Query: 316 VIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--K 371 +E GV D RY+L++ D ++ N++L +GNLV+R V ++ K Sbjct: 365 NAQETGVPADVWRYYLLKNRPETGDTQFEWRSFVDANNSELLAKLGNLVNRMVKLVASPK 424 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 Y+ ++P TE + L + +L++ M++ + + + +V + + Sbjct: 425 AYNSIVPD-FTVTEPFKPALEEITTLLRQYITEMESVHLRSGVGTAMKIVEAGNGLIQSN 483 Query: 432 K-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490 K L P+RA+ V+ + V +I ++ + ++P + I + L V N SLD Sbjct: 484 KLDNSLIANEPERAAAVVGIVVNLIYLISSIFSPYLPATSASILEQLNVPFTN--IPSLD 541 Query: 491 ---------QRLKPGFMLHKT---FDPIFPR 509 + +KPG + K F I P+ Sbjct: 542 DLKDEGWEPELIKPGHKIGKAKYLFSQIDPK 572 >gi|309808438|ref|ZP_07702337.1| tRNA ligases class I (M) [Lactobacillus iners LactinV 01V1-a] gi|308168266|gb|EFO70385.1| tRNA ligases class I (M) [Lactobacillus iners LactinV 01V1-a] Length = 110 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 46/102 (45%), Positives = 68/102 (66%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + IG+AY + AD +AR+ R +G D F TGTDEHG KI + Sbjct: 1 MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102 A+ G+ + FVD + +++ + +LDISYD FIRTT++ H Sbjct: 61 KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEH 102 >gi|156311420|ref|XP_001617781.1| hypothetical protein NEMVEDRAFT_v1g156733 [Nematostella vectensis] gi|156195775|gb|EDO25681.1| predicted protein [Nematostella vectensis] Length = 311 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 88/312 (28%), Positives = 144/312 (46%), Gaps = 35/312 (11%) Query: 1 MKEREKLY-ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58 M E K Y I+ A+ Y N HIGH A + +D+ AR+ RL G DV F G+DEHG I Sbjct: 1 MLENPKRYTITAALPYTNGPIHIGHLAGVYVPSDIYARYLRLQGKDVAFMCGSDEHGVAI 60 Query: 59 AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 + A+ G+T + +D+ R IS+D++ RT+ K HHDT + ++K+ + G Sbjct: 61 SMKAKKEGITPQEVIDKYDGIIRQSFLDFGISFDNYSRTSSKIHHDTAQEFFRKLYENGK 120 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY----KGADGQYYNAQH-------------NPVQWME 161 + Y + + + D V K + + Y Q NP + Sbjct: 121 FIEQTTEQLYDAKADQFLADRFVTGTCPKCGNEEAYGDQCEKCGSSLNATDLINPKSTIT 180 Query: 162 EEGYFFRLSAYQDKLLSYYESH-PEFILPIERRN-------EVISFVKSGLKDLSLSRKT 213 E + + + L+ Y++ E++L + + +V S+V GL+ +++R Sbjct: 181 GETPVLKETKHWFLPLNEYDTFLREWVLEGHKNDWKSNVYGQVKSWVDGGLEPRAVTRD- 239 Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKD 266 DWGI +P + +YVW DA Y++ T +G + + D +H IGKD Sbjct: 240 LDWGIDVPVEGAEGKKLYVWFDAPIGYISATKEWAAKEGKDWEPYWKDQDTKLVHFIGKD 299 Query: 267 ILRFHAIYWPAF 278 + FH I +PA Sbjct: 300 NIVFHCIIFPAM 311 >gi|47222843|emb|CAF96510.1| unnamed protein product [Tetraodon nigroviridis] Length = 1242 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 78/294 (26%), Positives = 144/294 (48%), Gaps = 20/294 (6%) Query: 198 SFVKSGLKDLSLSRKTFDWGIKIP--DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAK 254 S+++ GLK ++R WG +P D + YVW DA YL+ T Y D + K Sbjct: 818 SWLRDGLKPRCITRD-LKWGTPVPHEDFKDKVFYVWFDAPIGYLSITANYTDEWE----K 872 Query: 255 FWPADLHV-----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSL 307 +W V + KD + FH++ +P LL A N L + + ++ ++ K SKS Sbjct: 873 WWKNPTQVELYNFMAKDNVPFHSVVFPCSLLGARDNYTLVNHLVATEYLNYEDTKFSKSR 932 Query: 308 G-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 G V + ++ D R++L+ G+D + L + N++L N +GN ++R+ Sbjct: 933 GVGVFGDMAKDTDIPCDVWRFYLLYVRPEGQDSSFSWTDLATKNNSELLNNLGNFINRAG 992 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 + K ++G +P + D+ +L++ LQ+ + M I AL ++++ ++ Sbjct: 993 MFVTKFFEGCVPA-MVLQQEDKKLLALVGWELQQYIQLMDRVKIRDALKHILNISRHGNQ 1051 Query: 427 YFDAQKPW-ELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y +PW ++K + D RA TV V+V + L+++L ++P ++ I D L Sbjct: 1052 YIQINEPWKKIKGADADRQRAGTVTGVSVNIACLLSVMLSPYMPIVSQTIRDQL 1105 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 2/112 (1%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K+++ + +++A+ Y N PH+G+ ++ ADV +R+ RL G +VL+ GTDE+G Sbjct: 595 KDKKNVLVTSALPYVNNVPHLGNIIGCVLSADVFSRYSRLRGWNVLYLCGTDEYGTATET 654 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR-ILWK 111 A G+T D+ + I +D F RTT ++ + + I W+ Sbjct: 655 KALEEGLTPLEICDKYHAVHAAIYKWFQIDFDFFGRTTTEKQTEIAQDIFWR 706 >gi|41615241|ref|NP_963739.1| hypothetical protein NEQ457 [Nanoarchaeum equitans Kin4-M] gi|68565990|sp|Q74MZ1|SYM_NANEQ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|40068965|gb|AAR39300.1| NEQ457 [Nanoarchaeum equitans Kin4-M] Length = 776 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 75/297 (25%), Positives = 142/297 (47%), Gaps = 28/297 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW-----PADLHVIGKDILRFHAIYWPAFLLS 281 ++YVW DA Y++ T + +P+ +W P +H IGKD + FH I+WPA ++ Sbjct: 285 VLYVWFDAPIGYISFT-FETSPEYRY--YWDEKEKPYIVHFIGKDNIPFHTIFWPALIIG 341 Query: 282 ANL-------------PLPKKVFSHGFILHKGEKISKS-LGNVIDPIEVIEEVGVDALRY 327 NL LP +VF + ++ + G+K SKS V ++ +D R+ Sbjct: 342 RNLGYKNINHILDFDIALPYQVFGNPYLNYYGKKFSKSKRWGVFLDNIDKIDIDIDYFRF 401 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 +L KD ++ D K+ +N +L + IGN + R ++ I ++G+ P + D Sbjct: 402 YLAYIHTVSKDMSFEWDQFKEVINKELVDNIGNFIHRVLTFIYNRFNGIPPKIEHLDDKD 461 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 + +L ++ +++ + I AL ++++ + ++YF ++PW KTN Sbjct: 462 KELLDKIKQLPEKVFNFIWKGEIGNALREIVNTSNLANKYFQEKEPW---KTN---DPNT 515 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504 + + E ++ ILL F+P+ A + I + + Q +++ KP + HK D Sbjct: 516 IAIAFEAVKTFIILLYPFIPEKAKLLASIANIDIKWDFNQKVEKINKPFIVFHKLSD 572 Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust. Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 1/99 (1%) Query: 6 KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 ++ ++ A+ Y N H+GH A + AD+ RF +L G + L+ G+D++G I A Sbjct: 2 RILVTAALPYSNGPIHLGHIAGAYLPADIFYRFVKLKGYNALYICGSDQYGSPIELNAIK 61 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103 + K + + ++ +I +D + T E H Sbjct: 62 LNIDPKDYASFYRKIQEEIFKKFNIKFDIYSGTAESNIH 100 >gi|164663049|ref|XP_001732646.1| hypothetical protein MGL_0421 [Malassezia globosa CBS 7966] gi|159106549|gb|EDP45432.1| hypothetical protein MGL_0421 [Malassezia globosa CBS 7966] Length = 712 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 102/423 (24%), Positives = 179/423 (42%), Gaps = 62/423 (14%) Query: 3 EREKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + E + +++A+ Y N PH+G+ + ADV AR+ R + L+ GTDE+G Sbjct: 41 DEENVLVTSALPYVNNVPHLGNIIGSTLSADVFARYARTQNKNTLYICGTDEYGTATETK 100 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A GV+ + D+ + + I +D F RTT R + + +++K+ + G + Sbjct: 101 ALEDGVSPQALCDKYHALHAQVYEWFQIGFDYFGRTTTPRQTEIAQDVFRKLYENGYFEE 160 Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYN------------------AQHN 155 Y E + D V Y A G + + Sbjct: 161 RVMRQLYCASCERFLADRYVNGICPKCDYDDARGDQCDKCGQLLDAVELKEPKCKLCKGT 220 Query: 156 PVQWMEEEGYFFRLSAYQDKLLSY---------YESHPEFILPIERRNEVISFVKSGLKD 206 P Q + + F R+ A Q + ++ + S+ FI S+ K GL+ Sbjct: 221 P-QERDSKHMFLRIDALQPQTEAWASEMSKKGKWSSNGTFI--------TESWFKEGLRP 271 Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-- 262 S+SR WG+ +P ++YVW DA Y + T N K+W HV Sbjct: 272 FSVSRD-LKWGVPVPLQGYEDKVLYVWFDAPIGYPSITA---NYTSEWEKWWKNPEHVRL 327 Query: 263 ---IGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317 +GKD +RFH + +P+ L+ P + + + ++ ++G K SKS N+ + Sbjct: 328 YQFMGKDNVRFHTVIFPSCLIGTKDPWTMLYHINTAEYLQYEGGKFSKSR-NIGVFGDRA 386 Query: 318 EEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 +++GV RY+L+ D + R N++L +GN V+R ++ +K Y+G Sbjct: 387 KDIGVSPSVWRYYLLSTRPESSDSQFVWHDFVTRNNSELLKNLGNFVNRILT-FMKKYEG 445 Query: 376 MIP 378 +P Sbjct: 446 RLP 448 >gi|238761088|ref|ZP_04622065.1| Methionyl-tRNA synthetase [Yersinia kristensenii ATCC 33638] gi|238761341|ref|ZP_04622317.1| Methionyl-tRNA synthetase [Yersinia kristensenii ATCC 33638] gi|238700315|gb|EEP93056.1| Methionyl-tRNA synthetase [Yersinia kristensenii ATCC 33638] gi|238700568|gb|EEP93308.1| Methionyl-tRNA synthetase [Yersinia kristensenii ATCC 33638] Length = 415 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 12/227 (5%) Query: 254 KFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308 +FW D H IGKDI+ FH+++WPA L +N P +F HG++ G K+SKS G Sbjct: 18 EFWRKDSTTDLYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRG 77 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVS 367 I ++ + D LRY+ +++ D + + +RVNAD+ N + NL SR+ Sbjct: 78 TFIKAGTYLKHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAG 137 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 I K + G + A E + + I + ++ +A+ ++++L +RY Sbjct: 138 FISKRFAGKLADHLASPE----LYKTFTDAAVSIADAYNSRESSKAIREIMALADVANRY 193 Query: 428 FDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 D Q PW + K + A + + + + R L L+ +P L + Sbjct: 194 VDEQAPWVVAKEDGRDADLQAICSMGINLFRVLMTYLKPVLPALTAR 240 >gi|33322961|gb|AAQ07217.1|AF496525_1 methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp. lactis] Length = 90 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 45/90 (50%), Positives = 62/90 (68%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289 VW AL NY+T GY D K+WPAD+H++GK+I+RFH IYWP L++ +LPLPK+ Sbjct: 1 VWXXALANYITALGYGLEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQ 60 Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 VF HG++L +K+SKS GN + P +I Sbjct: 61 VFGHGWVLIYKDKMSKSKGNAVYPESLISR 90 >gi|189196444|ref|XP_001934560.1| methionyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187980439|gb|EDU47065.1| methionyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 637 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 118/514 (22%), Positives = 215/514 (41%), Gaps = 53/514 (10%) Query: 9 ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N PH+G+ ++ ADV ARF R G + L+ GTDE+G A V Sbjct: 19 ITSALPYVNNVPHLGNIVGSVLSADVFARFSRARGYNTLYVCGTDEYGTATETKAIEEKV 78 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + K D+ ++ +IS+D F RT ++ D + ++ K+ G + + + Sbjct: 79 SPKELCDKYFALHSEVYKWFNISFDHFGRTPTQQQTDIAQDIFTKLYKNGFLEEQTTTQP 138 Query: 128 YSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ------ 173 Y +++ D V Y+ A G + + + +E + +L Sbjct: 139 YCETHKSFLADRFVEGTCPLCNYEDARGDQCDKCGHLLDPLELKNPRCKLDGATPVPRET 198 Query: 174 -------DKLLSYYE-----SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 DKL E S E S++K GL+ ++R WG +P Sbjct: 199 KHVYLCLDKLQPLEEEWFKKSSKEGNWSSNGVQITSSWLKEGLRPRGITRD-LKWGTAVP 257 Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIY 274 + +MYVW DA Y++ T ++W HV +GKD + FH + Sbjct: 258 LEGYEDKVMYVWFDACIGYVSITATYTE---DWKQWWHNPEHVKLYQFMGKDNVPFHTVV 314 Query: 275 WPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLV 330 +P + + + + ++ ++ K SKS N+ +E G+ D RY+L+ Sbjct: 315 FPCSQIGTKDKWTMLNTISTTEYLNYEKGKFSKSR-NIGVFGNNAKETGIPSDVWRYYLL 373 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI--LKDYDGMIPTPGAFTESDE 388 D ++ DG N +L +GN ++R + + K YD ++P +T+ D+ Sbjct: 374 SHRPETGDTEFEWDGFIAANNNELLKNLGNFINRVIKFVNNAKIYDSVVPD---YTKFDD 430 Query: 389 SILSVCSRVLQEIREN----MQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTNPDR 443 + + + ++ + +++ I ALA + + S + D + +L PDR Sbjct: 431 PYFTEHRKKVNDLLKTYIAELEDVKIRAALATALHVSSLGNLLLQDNKLDNKLATEQPDR 490 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + V+ + + I LA L+Q F+P I L Sbjct: 491 CAAVVGLALSQIHLLASLIQPFMPDTTAAILSQL 524 >gi|330945683|ref|XP_003306603.1| hypothetical protein PTT_19784 [Pyrenophora teres f. teres 0-1] gi|311315833|gb|EFQ85309.1| hypothetical protein PTT_19784 [Pyrenophora teres f. teres 0-1] Length = 637 Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 118/514 (22%), Positives = 215/514 (41%), Gaps = 53/514 (10%) Query: 9 ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N PH+G+ ++ ADV ARF R G + L+ GTDE+G A V Sbjct: 19 ITSALPYVNNVPHLGNIVGSVLSADVFARFSRARGYNTLYVCGTDEYGTATETKAIEEKV 78 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 + K D+ ++ +IS+D F RT ++ D + ++ K+ G + + + Sbjct: 79 SPKELCDKYFALHSEVYKWFNISFDHFGRTPTQQQTDIAQDIFTKLYKNGYLEEQTTTQP 138 Query: 128 YSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ------ 173 Y +++ D V Y+ A G + + + +E + +L Sbjct: 139 YCETHKSFLADRFVEGTCPLCNYEDARGDQCDKCGHLLDPLELKNPRCKLDGATPVPRET 198 Query: 174 -------DKLLSYYE-----SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 DKL E S E S++K GL+ ++R WG +P Sbjct: 199 KHVYLCLDKLQPLEEEWFKKSSKEGNWSSNGVQITSSWLKEGLRPRGITRD-LKWGTAVP 257 Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIY 274 + +MYVW DA Y++ T ++W HV +GKD + FH + Sbjct: 258 LEGYEDKVMYVWFDACIGYVSITATYTE---DWKQWWHNPEHVKLYQFMGKDNVPFHTVV 314 Query: 275 WPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLV 330 +P + + + + ++ ++ K SKS N+ +E G+ D RY+L+ Sbjct: 315 FPCSQIGTKDKWTMLNTISTTEYLNYEKGKFSKSR-NIGVFGNNAKETGIPSDVWRYYLL 373 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI--LKDYDGMIPTPGAFTESDE 388 D ++ DG N +L +GN ++R + + K YD ++P +T+ D+ Sbjct: 374 SHRPETGDTEFEWDGFIAANNNELLKNLGNFINRVIKFVNNAKIYDSVVPD---YTKFDD 430 Query: 389 SILSVCSRVLQEIREN----MQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTNPDR 443 + + + ++ + +++ I ALA + + S + D + +L PDR Sbjct: 431 PYFTEHRKKVNDLLKTYIAELEDVKIRAALATALHVSSLGNLLLQDNKLDNKLATEQPDR 490 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + V+ + + I LA L+Q F+P I L Sbjct: 491 CAAVVGLALSQIHLLASLIQPFMPDTTAAILSQL 524 >gi|19112378|ref|NP_595586.1| cytoplasmic methionine-tRNA ligase Mrs1 (predicted) [Schizosaccharomyces pombe 972h-] gi|51702161|sp|Q9UUF2|SYMC_SCHPO RecName: Full=Probable methionyl-tRNA synthetase, cytoplasmic; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|5679723|emb|CAB51763.1| cytoplasmic methionine-tRNA ligase Mrs1 (predicted) [Schizosaccharomyces pombe] Length = 782 Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 100/415 (24%), Positives = 175/415 (42%), Gaps = 53/415 (12%) Query: 7 LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ + ADV AR+HR + L+ GTDE+G A Sbjct: 224 ILITSALPYVNNVPHLGNIVGSTLSADVFARYHRARNHNTLYICGTDEYGTATETKALEE 283 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV+ K D+ +++ D +I +D F RTT + + ++ K+ + + + Sbjct: 284 GVSPKELCDKYHALHKEVYDWFEIDFDHFGRTTTPKQTGIAQHIFTKLYNNDYMAIDTMT 343 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNA------------------QHNPVQW 159 Y + Y D V Y A G + + PV+ Sbjct: 344 QLYCEVHQGYLADRYVEGTCPKCGYDDARGDQCDGCGGLLNAFELIDPKCKLDRATPVK- 402 Query: 160 MEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E + F L Q + S+ +S E R+ S++K GL+ ++R WG Sbjct: 403 RETKHVFLSLDKLQPAVESWAMQSAVEGKWSNNGRSITESWLKEGLRPRCITRD-LKWGT 461 Query: 219 KIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKDILRF 270 +P + ++YVW DA Y++ T Y D + K+W P + + +GKD + F Sbjct: 462 PVPLEEFKGKVLYVWFDATIGYISITANYTDEWE----KWWRNPEQVKLYQFMGKDNVPF 517 Query: 271 HAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEEVGVD 323 H + +P+ LL + + + ++ ++ K SKS GN I + V Sbjct: 518 HTVIFPSSLLGTGEKWTMLHHINTTDYLNYETGKFSKSRGVGVFGNTAQDIGLSPSV--- 574 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 RY+L+ D + R N++L +GN V+R++ Y+G++P Sbjct: 575 -WRYYLLSSRPETSDTMFTWKEFITRHNSELLANLGNFVNRTLKFTTAKYNGLVP 628 >gi|260948086|ref|XP_002618340.1| hypothetical protein CLUG_01799 [Clavispora lusitaniae ATCC 42720] gi|238848212|gb|EEQ37676.1| hypothetical protein CLUG_01799 [Clavispora lusitaniae ATCC 42720] Length = 746 Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 114/514 (22%), Positives = 223/514 (43%), Gaps = 45/514 (8%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD+ AR+ + + LF GTDE+G A Sbjct: 187 ILITSALPYVNNVPHLGNIVGSVLSADIYARYAKNRNYNALFVCGTDEYGTATETKALEE 246 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 VT + D+ + +D+ D DI++D F RTT + + ++ K+ + + Sbjct: 247 HVTPQELCDKYHKVHKDVYDWFDINFDYFGRTTTPLQTEIAQDIFMKLYHNNYLEEQTTE 306 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN---PVQWMEEEG---------- 164 Y ++ D V Y+ A G + N P + +E Sbjct: 307 QLYCEVHHSFLADRFVEGTCPKCAYEDARGDQCDKCGNLLNPFELIEPRCKLDNSKPVPR 366 Query: 165 ----YFFRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIK 219 + +L+ + +L + E E + + S++K GL ++R WG Sbjct: 367 NSTHVYLKLNELEPELKEWVEEAAEKGAWSKNSKTITNSWLKQGLDPRCITRDLV-WGTP 425 Query: 220 IPDDP--QYIMYVWIDALTNYLT-TTGYLDNP---DGSKAKFW--PADLHV---IGKDIL 268 +P + ++YVW DA Y++ T Y + DG + ++W P ++++ +GKD + Sbjct: 426 VPLEKFKDKVLYVWFDATIGYVSITANYFKDKEIKDGWQ-QWWRNPENVNLYQFMGKDNV 484 Query: 269 RFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325 FH + +PA + K + + ++ ++ K SKS G + E + Sbjct: 485 PFHTVVFPATQIGTRDKWTKLHHLNTTEYLQYEDGKFSKSRGVGVFGNNARETGISPSVW 544 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 RY+L D + R N++L +GN V+R V + Y+G++P+ A Sbjct: 545 RYYLASVRPETSDSHFSWKEFVTRNNSELLANLGNFVNRLVKFAIAKYNGVVPSYDANKI 604 Query: 386 SD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTNPDR 443 ++ S + +L ENM+ + R L +++ S +++ D + L PD Sbjct: 605 ANYASFEKDVNDLLTSYIENMEAVNLRRGLEIAMAISSRGNQFLQDNKLDNSLFNNTPDV 664 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + V+ V + +I ++ ++ F+P ++I ++L Sbjct: 665 SDAVVGVGLNLIYLVSAVISPFMPATRDQICEML 698 >gi|26454791|gb|AAH40934.1| MARS2 protein [Homo sapiens] Length = 265 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 17/220 (7%) Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 P+++ H G+K+SKSLGNV+DP + VD RYFL+R+ D Y + + Sbjct: 4 PQRICVHSHWTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKV 63 Query: 347 KKRVNADLANGIGNLVSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILS 392 K +N++LA+ +G L++R + + + Y T PG S D +++S Sbjct: 64 VKLLNSELADALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVS 123 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLY 449 + + +++ ++ N I++AL V S V + + + PW+L +P A TVL+ Sbjct: 124 AVATLPKQVADHYDNFRIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLH 183 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489 V +E +R LLQ P LA+K+ L V+ R L Sbjct: 184 VALECLRVFGTLLQPVTPSLADKLLSRLGVSASERSLGEL 223 >gi|171695362|ref|XP_001912605.1| hypothetical protein [Podospora anserina S mat+] gi|170947923|emb|CAP60087.1| unnamed protein product [Podospora anserina S mat+] Length = 623 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 120/556 (21%), Positives = 222/556 (39%), Gaps = 105/556 (18%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + +++A+ Y N PH+G+ ++ ADV ARF R G +VLF GTDE G + A+ Sbjct: 19 ILVTSALPYVNNVPHLGNIIGSVLSADVFARFWRGRGGNVLFVGGTDEFGTTTSLRAREE 78 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV + D+ + +D+ + +IS+D F RTT RH + DI+K + Sbjct: 79 GVAPQELCDKYHKIHKDVYEWFNISFDIFGRTTNDRHTEITH----------DIFKELWG 128 Query: 126 -GWYSLRD-EAYYND-------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 G +RD E + + D + +G + + + Q E + + F ++ + Sbjct: 129 EGLIEIRDSEQLWCEECKGFVFDRLVEGTCPECGSEEARGDQCGECD-WVFDITELVEPK 187 Query: 177 LSYYESHP------EFILPIERRNEVISFVK--------------SGLKDLSLSRKTFDW 216 + P L ++ ++ +G + ++R DW Sbjct: 188 CKIHGGRPALRPSKHLFLKLDNHGPLLENQAKEQGEDWLVNAKEINGNSSICITRDGLDW 247 Query: 217 GIKIPDD----PQYIMYVWIDALTNYLTTTGY------------------LDNPDGSKAK 254 G +P + Y W DAL Y++ T + + D + + Sbjct: 248 GTPVPGRLAGFDGKVFYPWWDALLGYISITASGMEGESWRAWWRPSTPIAMKSHDDNDSS 307 Query: 255 FW-PAD-----------LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKG 300 F+ P D +G D + FH I +PA LL + P P+ + S F+ ++G Sbjct: 308 FYKPGDNTPKSDVGVRLSQFLGADNIFFHGILFPATLLPLDPPYTAPRHIASTRFLTYQG 367 Query: 301 EKISKSLG-NVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGI 358 + SKSLG V + D R+FL++ G +D + D L + N I Sbjct: 368 GRFSKSLGVGVFGDNAQQTGLSADVFRFFLLQSRPEGMEDTDFTWDRLVEVHNELFVGKI 427 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 G LV + +L D +G++P + + +LS + ++ + +H+ L Q + Sbjct: 428 GKLVHK----VLTDLNGVVPH--SHDHINGPLLSSVGQTIKRFKGG-----VHKLLVQYV 476 Query: 419 SLVSEVDRYFDAQKPWELKK---------------TNPDRASTVLYVTVEVIRQLAILLQ 463 + + + EL T+ VL V + ++ + +L+ Sbjct: 477 TQLKNSELRGGLMTTLELTCGGIALLDLVSNRVMLTDTCERQAVLEVGINLVYLVVRMLE 536 Query: 464 AFVPKLANKIFDILFV 479 ++PK ++++L V Sbjct: 537 PYIPKTVESLYEVLGV 552 >gi|2257528|dbj|BAA21422.1| methionyl-tRNA synthetase [Schizosaccharomyces pombe] Length = 577 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 100/415 (24%), Positives = 175/415 (42%), Gaps = 53/415 (12%) Query: 7 LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ + ADV AR+HR + L+ GTDE+G A Sbjct: 19 ILITSALPYVNNVPHLGNIVGSTLSADVFARYHRARNHNTLYICGTDEYGTATETKALEE 78 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GV+ K D+ +++ D +I +D F RTT + + ++ K+ + + + Sbjct: 79 GVSPKELCDKYHALHKEVYDWFEIDFDHFGRTTTPKQTGIAQHIFTKLYNNDYMAIDTMT 138 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNA------------------QHNPVQW 159 Y + Y D V Y A G + + PV+ Sbjct: 139 QLYCEVHQGYLADRYVEGTCPKCGYDDARGDQCDGCGGLLNAFELIDPKCKLDRATPVK- 197 Query: 160 MEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E + F L Q + S+ +S E R+ S++K GL+ ++R WG Sbjct: 198 RETKHVFLSLDKLQPAVESWAMQSAVEGKWSNNGRSITESWLKEGLRPRCITRD-LKWGT 256 Query: 219 KIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKDILRF 270 +P + ++YVW DA Y++ T Y D + K+W P + + +GKD + F Sbjct: 257 PVPLEEFKGKVLYVWFDATIGYISITANYTDEWE----KWWRNPEQVKLYQFMGKDNVPF 312 Query: 271 HAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEEVGVD 323 H + +P+ LL + + + ++ ++ K SKS GN I + V Sbjct: 313 HTVIFPSSLLGTGEKWTMLHHINTTDYLNYETGKFSKSRGVGVFGNTAQDIGLSPSV--- 369 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 RY+L+ D + R N++L +GN V+R++ Y+G++P Sbjct: 370 -WRYYLLSSRPETSDTMFTWKEFITRHNSELLANLGNFVNRTLKFTTAKYNGLVP 423 >gi|300707442|ref|XP_002995928.1| hypothetical protein NCER_101052 [Nosema ceranae BRL01] gi|239605171|gb|EEQ82257.1| hypothetical protein NCER_101052 [Nosema ceranae BRL01] Length = 525 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 112/496 (22%), Positives = 206/496 (41%), Gaps = 53/496 (10%) Query: 35 ARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDF 94 ARF R + DV+F +GTDE+G I AA T ++N + + D +I +D F Sbjct: 3 ARFCRKNNEDVVFLSGTDEYGTAIEMAAFAQNKTPLQICEENRIIHKKIYDWFNIDFDFF 62 Query: 95 IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV--------YKGAD 146 TT H + + KI + G + ++ + + + D V Y A Sbjct: 63 GHTTSTAHTKNVQDFFNKIHNNGFFTEQEIEQFFCDKCQIFLADRYVVGTCKFCKYTDAK 122 Query: 147 GQYYNAQHNPVQWME-----------------EEGYFFRLSAYQDKLLSYYESHPEFILP 189 G + + + ++ FF + ++DKL + ++ ++ Sbjct: 123 GDQCDGCGHTYKSLDLIDAKCTLCHSFPNIKSTRHLFFDFNNFKDKLQKLFNTNSQY-WS 181 Query: 190 IERRNEVISFVKSGLKDLSLSRKTFD-WGIKIP--DDPQYIMYVWIDALTNYLT-----T 241 + S++ L ++R + WG+ +P D + + YVW DA+ Y T Sbjct: 182 ENGKQITKSWLDQELLPRCMTRDLKNRWGVPVPLKDFEEKVFYVWFDAVIGYFTFYKEYV 241 Query: 242 TGYLDNPDGSKAKFWPAD--------LHVIGKDILRFHAIYWPAFLLSAN--LPLPKKVF 291 ++ + K + D + +GKD + FH I +P+ + + N PL KK+ Sbjct: 242 AARSESKELDKNNVFATDNILQDCELVQFMGKDNVFFHTIVFPSLIFATNDSYPLIKKLS 301 Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL-RYFLVREIACGKDGFYDKDGLKKR 349 F+L + EK SKS G+ I +++++ +G L RY+L + D + Sbjct: 302 VTEFLLFENEKFSKSRGHGIFGLDLVDNTMGQSCLWRYYLAKIRPEKCDSNFSFTHFTNV 361 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 ++ADL N IGN +R + I D +I + D+ ++ ++ +E + Sbjct: 362 IDADLNNNIGNFCNRVLKYIKNKNDKLI-SIDKLEHRDDLMVQTIDKIYKEYLTSFSAIR 420 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 I AL +++ + + Y Q+ K P + V + V +I Q LL+ F+P Sbjct: 421 IREALEKILEISKVGNEY--VQQVVSSKIEVP-KGFQVAFSIVVLIGQ---LLEPFIPVS 474 Query: 470 ANKIFDILFVADENRC 485 + K+ + EN C Sbjct: 475 SEKLLKMCNRKKENFC 490 >gi|212545893|ref|XP_002153100.1| methionyl-tRNA synthetase [Penicillium marneffei ATCC 18224] gi|210064620|gb|EEA18715.1| methionyl-tRNA synthetase [Penicillium marneffei ATCC 18224] Length = 677 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 97/366 (26%), Positives = 166/366 (45%), Gaps = 33/366 (9%) Query: 166 FFRLSAYQDKLLSYYES-HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 + RL A +DK++ ++E E I + V S++ GLK +++R WG+ IP Sbjct: 225 YLRLDALKDKIVPWFEKVSKENDWSINTSSIVQSWIDRGLKPRAITRD-IKWGVPIPTGI 283 Query: 222 ---DDPQY---IMYVWIDALTNYLTTTGYL---DNPDGSKAKFW---PADLHV---IGKD 266 D+ Y + YVW DA Y++ T DN +G K + W P + + +GKD Sbjct: 284 EGLDEEAYKNKVFYVWFDACIGYVSITANYTDGDNLEGKKWEQWWKHPEQVSLFQFMGKD 343 Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVD 323 + FH+I +P L + + + K+ + ++ ++G K SKS G V VG D Sbjct: 344 NVPFHSIIFPGSQLGSGMKWTQVHKISATEYLNYEGGKFSKSKGVGVFGTSAKDTGVGPD 403 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 R++L+ D + D N +L +GNLV+R + DG +P A+ Sbjct: 404 IWRFYLLSRRPESSDTEFKWDEFVSTNNNELLKNLGNLVARVTKFCIAKMDGTVP---AY 460 Query: 384 T-ESDESILSVCSRVLQEIREN----MQNQLIHRALAQVISLVSEVDRYF-DAQKPWELK 437 + E+ +++L+ R + + M + AL ++ + S ++ D + L Sbjct: 461 SEEAAKAVLTEHERQVNSYLTSYITFMDATKMRPALNDIMHISSLGNKLLQDNKLDNRLF 520 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS-LDQRLKPG 496 PDR + V+ + + I LA LL F+P + IF+ L E R + LKPG Sbjct: 521 TEEPDRCAAVINIALNHIHLLASLLSPFMPATSKSIFEQLGAQPEARIPDKWVSDVLKPG 580 Query: 497 FMLHKT 502 L ++ Sbjct: 581 HKLGES 586 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 5/110 (4%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR++R G L+ G+DE+G A Sbjct: 16 ILITSALPYVNNVPHLGNIIGSVLPADVFARYNRARGFPTLYICGSDEYGTATETKALEE 75 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH----HDTCRILWK 111 GV+ + + + + D +I +D F RT D R LW+ Sbjct: 76 GVSPEELCAKYHTIHKGIYDWFNIEFDIFGRTPTAHQTKIVQDVFRGLWE 125 >gi|313227339|emb|CBY22485.1| unnamed protein product [Oikopleura dioica] Length = 535 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/300 (24%), Positives = 149/300 (49%), Gaps = 23/300 (7%) Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTG--------YLDN 247 S++K GL+ ++R WG+K+P D + YVW DA Y + T + Sbjct: 196 SWIKKGLEPRCMTR-DLKWGVKVPKDGYDHKVFYVWFDAPIGYPSITAEYTPKWRDWWLA 254 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISK 305 DG + K++ +GKD + FH++ +P++LL P L + + ++ ++ K SK Sbjct: 255 KDGQEVKYY----QFMGKDNVPFHSVLFPSYLLGTGKPWNLVNVINATEYLNYENGKFSK 310 Query: 306 SLGNVIDPIEVIE-EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 S G + + E + D R++L+ +D + + + N++L N +GN V+R Sbjct: 311 SRGVGVFGNQASETNIPADVWRFYLIYMRPEVQDTEFQWTDFQMKNNSELLNNLGNFVNR 370 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 +S ++K YDG +P+ + + ++ + +L++ E M+N L +V+++ Sbjct: 371 GLSFVVKFYDGKVPS-AEINGNMRAWVAEVNELLKQYIECMENNHQREGLRRVLAISKLG 429 Query: 425 DRYFDAQKPW-ELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 ++ +PW ++K +P + AS + ++ ++ L+ LL+ F+P + +I + VA Sbjct: 430 NKLIQTWQPWVKVKSKDPALRNEASACVMLSANLVFLLSSLLEPFMPMTSFEIARQVGVA 489 >gi|210617648|ref|ZP_03291679.1| hypothetical protein CLONEX_03903 [Clostridium nexile DSM 1787] gi|210149195|gb|EEA80204.1| hypothetical protein CLONEX_03903 [Clostridium nexile DSM 1787] Length = 923 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 111/426 (26%), Positives = 182/426 (42%), Gaps = 81/426 (19%) Query: 137 NDDEVYKGADGQY-----YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE------ 185 NDD G+Y Y A+ V +EE+GY ++ + + ++ H Sbjct: 340 NDDATINEHGGKYAGMDRYEARKAIVADLEEQGYLVKIEDHTHNVGTHDRCHTTVEPLIK 399 Query: 186 ---FILPIERRNEVISFVKSG-------------------LKDLSLSRKTFDWGIKIP-- 221 F+ E I+ +K+G ++D +SR+ + WG +IP Sbjct: 400 QQWFVKMEELAKPAINALKTGELKFVPERFDKIYLHWLENIRDWCISRQIW-WGHRIPAY 458 Query: 222 ------------DDPQYIMYV--------------WIDALTNYLTTTGYLDNPDGSKA-- 253 + P+ + W + +T G+ PD ++ Sbjct: 459 YCDECGEFVVAREMPEVCPHCGCTHFTQDEDTLDTWFSSALWPFSTLGW---PDSTEELD 515 Query: 254 KFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNV 310 F+P D+ V G DI+ F I + AF + P VF HG + +G K+SKSLGN Sbjct: 516 YFYPTDVLVTGYDIIFFWVIRMVFSAFAHTGKSPF-HTVFIHGLVRDSQGRKMSKSLGNG 574 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 IDP+EVIE+ G DALR LV A G D FYD+ + N + AN + N SR + M Sbjct: 575 IDPLEVIEQYGADALRMTLVTGNAPGNDMRFYDE---RVEANRNFANKVWN-ASRFILMN 630 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427 ++D P G T +D+ ILS + + +++ ENM + AL +V + + D Y Sbjct: 631 MEDKTITTPDLGELTPTDKWILSKVNTLAKDVTENMDKFELGIALQKVYDFIWDEFCDWY 690 Query: 428 FDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 + K + + + D A+ L+ V+ LL F+P ++ +I+ L +E+ Sbjct: 691 IELAK-YRMYHADEDAKAANATLWTLKTVLANGLKLLHPFMPFVSEEIYSALVPEEESLM 749 Query: 486 FQSLDQ 491 + Q Sbjct: 750 MSTWPQ 755 >gi|228917670|ref|ZP_04081211.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228841907|gb|EEM87013.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 288 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 68/281 (24%), Positives = 128/281 (45%), Gaps = 18/281 (6%) Query: 235 LTNYLTTTGYLDNPDGSKAK-FWPAD---LHVIGKDILRFHAIYWPAFLLS-ANLPLPKK 289 +T Y + + + G + FW ++ +V GKD + FH++ WPA LL +P+ Sbjct: 1 MTGYYSASKHWAEETGKDDREFWDSEAKTYYVHGKDNIPFHSVIWPAVLLGIGEGAIPRH 60 Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 + S+ ++ + K+S S + +++E D++RYFL +D + Sbjct: 61 IVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAPENRDTDFSWREFIYS 120 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 N++L GN V+R++ I K Y G++P E + I R+ + + E ++ Sbjct: 121 HNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI----ERLYKHVGEAIEQTK 176 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 AL + V ++YFD ++PW+ ++ +P +Y V +I A LL+ F+P Sbjct: 177 FKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYNCVYLIANFANLLEPFLPFS 236 Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 + +I + L + + N +P L D + P F Sbjct: 237 SERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 268 >gi|302918143|ref|XP_003052595.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256733535|gb|EEU46882.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 666 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 123/545 (22%), Positives = 220/545 (40%), Gaps = 75/545 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV AR+ R G + ++ G+DE+G A Sbjct: 13 KRNILITSALPYVNNIPHLGNIIGSVLSADVFARYCRARGHNTIYICGSDEYGTATETKA 72 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRI---LWKK------ 112 G++ + + + D I +D F RT T+++ +I LWK Sbjct: 73 LEEGLSPADLCAKYHALHKGVYDWFRIDFDIFGRTPTDQQTQIVQQIFSDLWKNGLIEER 132 Query: 113 ---------------------------------ISDKGDIYKGCYSGWYSLRDEAYYNDD 139 D+ D G + R+ + +DD Sbjct: 133 ETTQPFCADPAHCKFLADRFVEGECSICHDLGARGDQCDACGGLLDPFEPEREPSNDDDD 192 Query: 140 EVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRN 194 V A G N + + + + RL A +D L+ ++ +S E + Sbjct: 193 HVEAKATGWLINPRCKVDGTAPEKRRTKHLYLRLDAIKDLLVPWFHKSSKEGDWSANCIS 252 Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIP------DDPQY---IMYVWIDALTNYLTTTGYL 245 +++ GL ++R WG+ IP D +Y + YVW DA Y++ T L Sbjct: 253 ITQAWIDKGLLPRGITRD-LKWGVPIPKGLDGLSDEEYAEKVFYVWFDACIGYVSITKNL 311 Query: 246 DNP---DGSKAKFW---PADLHV---IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHG 294 +P DG+ + W P ++ + +GKD + FH I +PA L N K+ + Sbjct: 312 TDPGNLDGTNWEKWWKNPENVKLYQFMGKDNVPFHTIIFPASQLGTGENWTKVHKMSTTE 371 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNA 352 ++ ++G K SKS G + +E GV D RY+L+ D + N Sbjct: 372 YLNYEGGKFSKSRGVGVFG-NTAKETGVDPDVWRYYLLSRRPETADSEFKWPEFIDANNN 430 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIH 411 DL +GNL R + DG++P +T E E+ + LQ + Sbjct: 431 DLLKNLGNLNQRILKFCQAKLDGVVPDYTKYTDERLEAHKKEVNEALQTYITQFDAIKLR 490 Query: 412 RALAQVISLVSEVDRYF-DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 LA V+ + + ++ D++ +L PDR + V+ + + ++ LA ++ ++P Sbjct: 491 AGLATVMHISALGNKLLQDSKLNNQLLAEEPDRCAAVIGLGINHLQLLASIIHPYMPSTG 550 Query: 471 NKIFD 475 I + Sbjct: 551 EAILE 555 >gi|226290706|gb|EEH46190.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18] Length = 637 Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 129/562 (22%), Positives = 238/562 (42%), Gaps = 80/562 (14%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLAR--FHRLDGLDVLFTTGTDEHGQKI 58 +K + + I++A+ Y N PH+G+ I+ VL+ + + G LF GTDE+G Sbjct: 10 VKGQRNILITSALPYVNNVPHLGN----IVGSVLSADVYQKACGRPTLFVCGTDEYGTAT 65 Query: 59 AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 A GVT + + ++ +D+ + +I +D F RT +H + ++K++ + G Sbjct: 66 ETKALEEGVTPEELCAKYNKIHQDVYEWFEIGFDIFGRTPTAQHTQISQNIFKRLHENGF 125 Query: 119 IYKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWME 161 + + + + +++ D V Y A G Q H NP ++ Sbjct: 126 LEEKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLD 185 Query: 162 EEGYFFRLSAYQDKLLSYYESH-PEFILP-IERRN-----EVI--SFVKSGLKDLSLSRK 212 R + + LL + E++ P IE+ N VI S++K GLKD ++R Sbjct: 186 GATPVRRPTKHIHLLLDKLQPEIEEWVHPAIEKGNWPKNSRVITESWLKEGLKDRGITRD 245 Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IG 264 WG+ +P D + ++YVW +A Y + T PD + W P ++ + +G Sbjct: 246 -LKWGVPVPLDGYEKKVLYVWFEACIGYPSITANY-TPD---WELWWRDPDNVQLYQFLG 300 Query: 265 KDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321 KD + FH++ +P + K + + ++ ++ K SKS G V + Sbjct: 301 KDNVPFHSVIFPGTQIGTRDKWTKLYHLSTTEYLNYENGKFSKSRGIGVFGNNAKDTGIP 360 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPT 379 D RY+L++ D ++ N +L +GNLV+R V +I K Y ++P Sbjct: 361 PDVWRYYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSVVPE 420 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439 TE E L + +L++ M++ + L + +V + Sbjct: 421 -FTVTEQFEPALEEITALLRQYISEMESVHLRAGLVTAMKIV---------------EPP 464 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR------- 492 +P+ V+ + V +I ++ + ++P + I L V N SLD++ Sbjct: 465 SPNAQPPVVGIVVNLIYLISSIFSPYLPATSASILAQLNVPFRN--IPSLDEQKEVGWRA 522 Query: 493 --LKPGFMLHKT---FDPIFPR 509 +KPG + K F I P+ Sbjct: 523 DLIKPGHKIGKAKYLFSQIDPK 544 >gi|70926115|ref|XP_735646.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56509492|emb|CAH86895.1| hypothetical protein PC302210.00.0 [Plasmodium chabaudi chabaudi] Length = 231 Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 14/220 (6%) Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 K W + VIGKDIL+FH I + L S + +P+ + HG I + KISKSL N++ P Sbjct: 13 KLWNPYIQVIGKDILKFHGILYICLLNSLGIKIPEHILCHGLIKIENIKISKSLNNIVSP 72 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR----VNADLANGIGNLVSRSVSMI 369 ++E+ D +R + + G Y+ K+ L N +GNL+ R+VS+ Sbjct: 73 FTLLEKYDKDVIRLYFI-----GSGNIYEDKNFKESNLETFELFLRNSVGNLLYRTVSLC 127 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429 +++ +I F + + L ++ ENM+ L+ L +++ LV ++++YF Sbjct: 128 IENNYKIIKKHYLFNFTILNEFKSDKTNLIKLFENMEYPLL---LEKLMILVKKINKYFV 184 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 +PW K + + ++Y T E I+ +I + F+P + Sbjct: 185 HNEPWN-KLNDSKNFNLIIYETFECIK-FSIFMNPFIPNI 222 >gi|289616526|emb|CBI56691.1| unnamed protein product [Sordaria macrospora] Length = 671 Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 121/534 (22%), Positives = 210/534 (39%), Gaps = 63/534 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +E + I++A+ Y N PH+G+ ++ ADV ARF R GL L+ G+DE+G A Sbjct: 14 KENILITSALPYVNNVPHLGNIIGSVLSADVFARFCRARGLPTLYVCGSDEYGTATETKA 73 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR----ILWKK--ISDK 116 + GV + +D+ D IS+D F RT H + LWK I ++ Sbjct: 74 LSEGVDPATLCAKYHALHKDVYDWFRISFDKFGRTPTDEHTGITQEIFAQLWKNGFIEER 133 Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVY----KGADGQYYNAQHNPVQWMEEE--------- 163 C ++ Y + E GA G +A N + M+ + Sbjct: 134 ETTQAFCAVPEHNTFLADRYVEGECSICHDLGARGDQCDACGNLLDPMQPDKNAAGEDES 193 Query: 164 ---GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKD--LSLSRKTF 214 G+ D + ++ N+ I+ V++G ++++R Sbjct: 194 KGTGWLINPRCKLDGSTPERRKTKHLYIRLDELNKEITAWLDRVENGWSANCVAITRSWI 253 Query: 215 DWGIKIP-----------------DDPQY---IMYVWIDALTNYLT-TTGYLD--NPDGS 251 + G+K P D +Y + YVW DA Y + T Y D N +G Sbjct: 254 NNGLKPPWYHERSQVGFPKGLEGLSDEEYANKVFYVWFDACIGYASITKCYTDEGNLEGR 313 Query: 252 KAKFW---PADL---HVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKI 303 + W P ++ +GKD + FH I +P L + + + ++ ++G K Sbjct: 314 NWEKWWKNPNNVTLYQFMGKDNVPFHTIIFPGTQLGTKEKWTQVNHLSTTEYLNYEGGKF 373 Query: 304 SKSLG-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 SKS G V + D RY+L+ D + + N DL +GNL Sbjct: 374 SKSKGVGVFGNNARDTGIDPDVWRYYLLSRRPESGDSEFKWEEFIDSNNNDLLKNLGNLC 433 Query: 363 SRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 R V D +P P S + +++L+E E ++ + LA V+S+ Sbjct: 434 QRVVKFCQAKLDAKVPAYPATPIASLDEYKEEINKLLKEYNEQVKGTKLRAGLATVLSIS 493 Query: 422 SEVDRYF-DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 ++ D + +L P+R + V+ + ++ +A +L ++P A I Sbjct: 494 GVGNKLLQDNKLSNQLLTEEPERCNAVINFALNLLHLIAGVLTPYMPGTAQSIL 547 >gi|225569430|ref|ZP_03778455.1| hypothetical protein CLOHYLEM_05514 [Clostridium hylemonae DSM 15053] gi|225161638|gb|EEG74257.1| hypothetical protein CLOHYLEM_05514 [Clostridium hylemonae DSM 15053] Length = 885 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 78/238 (32%), Positives = 122/238 (51%), Gaps = 16/238 (6%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVI 311 F+P D+ V G DI+ F I + + + P VF HG + G K+SKSLGN I Sbjct: 476 FYPTDVLVTGYDIIFFWVIRMVFSGYAHTGKSPF-HTVFIHGLVRDSLGRKMSKSLGNGI 534 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368 DP+E+IE+ G DALR LV A G D FY+ +RV A + AN + N SR + M Sbjct: 535 DPLEIIEQYGADALRMTLVTGNAPGNDMRFYN-----ERVEASRNFANKVWN-ASRFILM 588 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 ++ + P D ILS C+R+++E+ ENM + AL +V + + D Sbjct: 589 NIEGKEITEPEASELLPGDRWILSKCNRLIREMTENMDKFELGIALQKVYDFIWDEFCDW 648 Query: 427 YFD-AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 Y + A++ + P+ A+ L+V V++ LL F+P ++ +I+ L +E+ Sbjct: 649 YIEIAKQRIYRAEEEPESANAALWVLKTVLKDALKLLHPFMPFVSEEIYGKLVPEEES 706 Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 +R + +T + PN + H+GHA + + D+L R+ R+ G + L+ GTD Sbjct: 33 DRSRKPFTTVMPPPNITGRLHMGHALDNTLQDILIRYKRMQGYNALWIPGTD 84 >gi|308235287|ref|ZP_07666024.1| methionyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018] Length = 291 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 84/269 (31%), Positives = 119/269 (44%), Gaps = 43/269 (15%) Query: 9 ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 ++ A Y N HIGH + +DV AR+ R+ G DVL +GTDEHG I A GV Sbjct: 1 MNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKEGV 60 Query: 68 TTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY-- 124 + + ++ +R +D+ D L +SYD F RTT H + ++++ G IYKG Sbjct: 61 SAQELANRYNRVITKDLCD-LGLSYDLFTRTTTANHEHVVQEMFRQCLKNGYIYKGTQKV 119 Query: 125 ----SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------QWM 160 S +L D Y GADG + NPV ++ Sbjct: 120 AISPSTGRTLPDR-YIEGTCPLCGADGARGDQCDACGNELDPDELINPVSKINGETPRFE 178 Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218 E E YF L A D LS+ S + R VI+F K++ T DWGI Sbjct: 179 ETEHYFLDLPALADANLSWLNSRDGW------RTNVINFSIGLFKEVKPRAITRDIDWGI 232 Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT 242 +P D+P +YVW DA+ YL+ + Sbjct: 233 PVPVEGWVDNPNKRLYVWFDAVIGYLSAS 261 >gi|71018895|ref|XP_759678.1| hypothetical protein UM03531.1 [Ustilago maydis 521] gi|46099436|gb|EAK84669.1| hypothetical protein UM03531.1 [Ustilago maydis 521] Length = 834 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 127/541 (23%), Positives = 223/541 (41%), Gaps = 85/541 (15%) Query: 7 LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + +++A+ Y N PH+G+ + ADV AR+ R + L+ GTDE+G A Sbjct: 151 ILVTSALPYVNNVPHLGNIIGSTLSADVYARYSRTRNRNTLYICGTDEYGTATETKALED 210 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT + D+ + + I +D F RTT + + + ++ K+ G + + + Sbjct: 211 GVTPQELCDKYHAQHAQVYEWFQIGFDHFGRTTTPKQTEIAQDVFLKLYKNGYLEERTMT 270 Query: 126 GWYSLRDEAYYNDDEVYK-----GAD----------GQYYNA-----------QHNPVQW 159 + + + D V G D GQ Y+A PVQ Sbjct: 271 QLFCQKCVRFLADRYVEGECPRCGYDDARGDQCDKCGQLYDAVELVKPRCKLCSSPPVQ- 329 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI--SFVKSGLKDLSLSRKTFDWG 217 + F R+ Q L + ++I S+ K GLK SL+R WG Sbjct: 330 KDSSHMFIRIDELQ-PLTEKWAREQAQKGGWSSNGKLITESWFKEGLKPFSLTRD-LKWG 387 Query: 218 IKIP--DDPQYIMYVWIDALTNYLT-TTGYLD-------NPDGSKAKFWPADLHVIGKDI 267 + +P ++YVW DA Y + T Y D NPD K +GKD Sbjct: 388 VPVPIKGMEDKVLYVWFDAPIGYPSITANYTDDWEKWWKNPDNVKL------YQFMGKDN 441 Query: 268 LRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA- 324 +RFH + +P+ L+ + P L + + ++ ++G K SKS N+ + ++G+ A Sbjct: 442 VRFHTVIFPSCLIGSKDPYTLLHHINTTEYLQYEGGKFSKSR-NIGVFGDKARDLGLSAS 500 Query: 325 -LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 RY+L+ D + R N++L +GN +R V +K YD +IP + Sbjct: 501 VWRYYLLANRPETADSQFAWRDFIARNNSELLANLGNFCNR-VLTFMKKYDYVIPAIPSD 559 Query: 384 TE------------------SDESILSVCSR----VLQEIRENMQNQLIHRALAQVISLV 421 ++ + S++S +R +L + +M+ I L +++L Sbjct: 560 SKLRSYKDGPVAAAAEGADDASSSVISRFARDVNLILGQYISSMEAVKIRSGLQHMMALS 619 Query: 422 SE-----VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 + V+ +FD L + R V+ V + +I L+ L+ F+P+ ++ I Sbjct: 620 ARGNLFLVESHFDNT----LFTESRARCDEVMIVALNLIWLLSALIHPFMPETSDAILKQ 675 Query: 477 L 477 L Sbjct: 676 L 676 >gi|254520461|ref|ZP_05132517.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] gi|226914210|gb|EEH99411.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] Length = 358 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 87/359 (24%), Positives = 155/359 (43%), Gaps = 45/359 (12%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 + A Y N H+G ++ D++AR+HRL G +V+F +GTD HG + A+ G+T Sbjct: 5 VGNAWPYANGPLHLGRIAVLLPGDIIARYHRLMGDEVVFLSGTDCHGTPVTMKAKEEGIT 64 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128 + F+ D L S+D F +T H + + ++ + G IY+ Y Sbjct: 65 PLEATIKYHDEFKRCFDSLGFSFDVFEKTHSDYHEEKVKKFILELYNNGYIYEKEIEQTY 124 Query: 129 SLRDEAYYND----------DEVYKGADGQY--------------YNAQHNPVQWMEEEG 164 + +D E+ G + N E + Sbjct: 125 CENCHEFLSDRYIEGKCPHCGEIVSGDQCESCLEIIDSEELLDKRCKLCGNETILKETKH 184 Query: 165 YFFRLSAYQD---KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 FF LS++++ +LL + E I +R ++ GL+D +++R F+WG+ +P Sbjct: 185 LFFSLSSFENDVRRLLIRQKGWRENAQKIVKR-----YLDEGLRDRAVTRD-FNWGVDVP 238 Query: 222 ----DDPQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD----LHVIGKDILRFHA 272 DD + ++VWI+A+ YLT + L+ + ++W + V GKD + FH Sbjct: 239 LEGYDDKK--IFVWIEAVMGYLTASMKCLEERNEDWKEYWQGEDSRVYFVHGKDNIPFHT 296 Query: 273 IYWPAFLLSANLPLPK-KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 + +PA L + P +V S ++ +G+ S I +++ VD RY+L Sbjct: 297 VIFPAILAGIGIKNPNLRVISSEYMKLEGKNFSSVKNWAIWGDYIVDNYDVDEFRYYLA 355 >gi|134300393|ref|YP_001113889.1| valyl-tRNA synthetase [Desulfotomaculum reducens MI-1] gi|134053093|gb|ABO51064.1| valyl-tRNA synthetase [Desulfotomaculum reducens MI-1] Length = 879 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 81/264 (30%), Positives = 130/264 (49%), Gaps = 27/264 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + + F+P + V G+DI+ F W A ++ + L Sbjct: 450 VLDTWFSSALWPFSTLGWPEKTE-ELEHFYPTSVLVTGRDIIFF----WVARMIFSGLRF 504 Query: 287 P-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-- 338 K+VF HG +L G K+SKSLGN +DP+++IE G D+LR+ L+ G D Sbjct: 505 MEEEPFKEVFIHGLVLDSLGRKMSKSLGNGVDPLDIIESHGADSLRFMLITGNTPGNDLR 564 Query: 339 -GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCS 395 F DG + + AN + N SR V M L DYD PT G +T +D ILS Sbjct: 565 FHFERLDGAR-----NFANKLWN-ASRFVMMNLGDYD---PTSQGGQYTLADRWILSRLQ 615 Query: 396 RVLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +++ + ++ + A + + SE D Y + KP KT P+ T +V V+ Sbjct: 616 GTAKDVTDFLERYELGEAARVLYEFIWSEFCDWYIELAKPRLFGKTTPEDRVTAQHVLVQ 675 Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477 V+RQ+ +L F+P + +I+ L Sbjct: 676 VLRQVLEMLHPFMPFITEEIWQKL 699 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 4/103 (3%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-QKIA 59 E++K + PN Q H+GHA + + D+L R+ R+ G + L+ GTD G A Sbjct: 34 EKDKTPFCIVMPPPNVTGQLHMGHALDNTLQDILTRWRRMQGYNALWIPGTDHAGIATQA 93 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102 K + + D F + Y + I TT+ RH Sbjct: 94 KVEEQLAKECQSKYDLGREKFLERVWAWKEQYGNRI-TTQLRH 135 >gi|125972845|ref|YP_001036755.1| valyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|125713070|gb|ABN51562.1| valyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] Length = 884 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 88/274 (32%), Positives = 132/274 (48%), Gaps = 19/274 (6%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 +I DP + W + +T G+ D + K F+P D+ V G DI+ F W A Sbjct: 443 RIEQDPD-TLDTWFSSALWPFSTLGWPDETEDLKY-FYPTDVLVTGYDIIFF----WVAR 496 Query: 279 LLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++ + L K VF HG + G K+SKSLGN IDP+E+I++ G DALR+ L Sbjct: 497 MIFSALEHTGKEPFKYVFIHGIVRDALGRKMSKSLGNGIDPLEIIDKYGTDALRFALTIG 556 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESIL 391 + G D + ++ K + + AN I N SR V M D D P FT SD+ IL Sbjct: 557 TSPGNDLRFSEE--KAESSRNFANKIWN-ASRFVLMNFDDNLDFSKVDPNKFTTSDKWIL 613 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449 S + + +E+ ENM+ + AL ++ + E D Y + KP K + R Y Sbjct: 614 SRVNNLTREVTENMEKFELGIALQKIYEFIWEEFCDWYIELVKPRLYDKDDETRLEA-QY 672 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V V+ LL ++P + +I+ L V DE+ Sbjct: 673 VLNYVLGTAMKLLHPYMPFITEEIYRHLVVDDES 706 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56 ++EK + I PN Q H+GHA + + D+L R+ R+ G L+ GTD Sbjct: 34 DKEKTPFTIVIPPPNITGQLHMGHALDETLQDILIRWKRMQGYCTLWLPGTDHASIATEA 93 Query: 57 KIAKAAQNAGVT 68 KI +A G+T Sbjct: 94 KIVEAMAKEGIT 105 >gi|256005887|ref|ZP_05430834.1| valyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|255990156|gb|EEU00291.1| valyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|316940919|gb|ADU74953.1| valyl-tRNA synthetase [Clostridium thermocellum DSM 1313] Length = 884 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 88/274 (32%), Positives = 132/274 (48%), Gaps = 19/274 (6%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 +I DP + W + +T G+ D + K F+P D+ V G DI+ F W A Sbjct: 443 RIEQDPD-TLDTWFSSALWPFSTLGWPDETEDLKY-FYPTDVLVTGYDIIFF----WVAR 496 Query: 279 LLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++ + L K VF HG + G K+SKSLGN IDP+E+I++ G DALR+ L Sbjct: 497 MIFSALEHTGKEPFKYVFIHGIVRDALGRKMSKSLGNGIDPLEIIDKYGTDALRFALTIG 556 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESIL 391 + G D + ++ K + + AN I N SR V M D D P FT SD+ IL Sbjct: 557 TSPGNDLRFSEE--KAESSRNFANKIWN-ASRFVLMNFDDNLDFSKVDPNKFTTSDKWIL 613 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449 S + + +E+ ENM+ + AL ++ + E D Y + KP K + R Y Sbjct: 614 SRVNNLTREVTENMEKFELGIALQKIYEFIWEEFCDWYIELVKPRLYDKDDETRLEA-QY 672 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V V+ LL ++P + +I+ L V DE+ Sbjct: 673 VLNYVLGTAMKLLHPYMPFITEEIYRHLVVDDES 706 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56 ++EK + I PN Q H+GHA + + D+L R+ R+ G L+ GTD Sbjct: 34 DKEKTPFTIVIPPPNITGQLHMGHALDETLQDILIRWKRMQGYCTLWLPGTDHASIATEA 93 Query: 57 KIAKAAQNAGVT 68 KI +A G+T Sbjct: 94 KIVEAMAKEGIT 105 >gi|260825349|ref|XP_002607629.1| hypothetical protein BRAFLDRAFT_123956 [Branchiostoma floridae] gi|229292977|gb|EEN63639.1| hypothetical protein BRAFLDRAFT_123956 [Branchiostoma floridae] Length = 784 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 91/333 (27%), Positives = 151/333 (45%), Gaps = 40/333 (12%) Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAK 254 S+V+ GLK ++R WG +P + + + YVW DA YL+ T Y D + K Sbjct: 361 SWVRDGLKPRCITRD-LKWGTPVPLEGFTEKVFYVWFDAPIGYLSITANYTDQWE----K 415 Query: 255 FWPADLHV-----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSL 307 +W V + KD + FH++ +P LL A N L + + ++ ++ K SKS Sbjct: 416 WWKNPQQVTLYNFMAKDNVPFHSVVFPCSLLGAEDNYTLVNHLQATEYLNYEDGKFSKSR 475 Query: 308 G-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 G V + D R++L+ +D + + + N++L N +GN V+R++ Sbjct: 476 GVGVFGNNAKDTGIPADIYRFYLLFVRPESQDSTFSWEDFMTKNNSELLNNLGNFVNRAL 535 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS---- 422 + + G+IP TE D +L+ +R LQ A Q + VS Sbjct: 536 MFVSNFFQGVIPAVDV-TEDDGQLLAQVNRELQ-------------AFIQCLEKVSWGGV 581 Query: 423 -EVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 ++Y QKPW L K NP RA TV+ + V L++++Q ++P +N I L Sbjct: 582 GGGNQYIQGQKPWVLVKGNPGEKARAGTVIGLAANVACLLSVMVQPYMPATSNTIQQQLQ 641 Query: 479 V-ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 A+ N + RL+ G + K P+F + Sbjct: 642 APAEVNILTDTFVCRLQAGHKIGKP-SPLFQKI 673 >gi|313893131|ref|ZP_07826708.1| valine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] gi|313442484|gb|EFR60899.1| valine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] Length = 885 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 79/266 (29%), Positives = 129/266 (48%), Gaps = 14/266 (5%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWP 276 ++ DP ++ W + T G+ D K +++P + V G DI+ F + + Sbjct: 444 RVTQDPD-VLDTWFSSGLWPFATMGWPDQTPELK-QWYPTSVLVTGYDIIFFWVARMIFM 501 Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 A +P K VF HG + +G K+SKSLGN I+P++VI++ G DALR+ LV Sbjct: 502 ALEFEDEIPF-KHVFIHGLVRDSQGRKMSKSLGNGINPLDVIDQFGADALRFTLVTGNTP 560 Query: 336 GKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSV 393 G D FY + + N + AN I N S+ V M L +YD +PT T +D+ I+ Sbjct: 561 GNDMRFYME---RVEANRNFANKIWN-ASKFVLMNLTNYDESFVPTADDLTLADQWIIQK 616 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVT 451 + +Q + N+ + A + V + + D Y + KP ++N TV Y+ Sbjct: 617 YNETVQSVTSNLDKFELGEAASSVYDFIWNTYCDWYIELAKPRLYSESNERDRRTVQYLL 676 Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477 V ++R + LL F+P + I+ L Sbjct: 677 VTILRHMLELLHPFMPFVTEHIWQHL 702 Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 23/123 (18%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKA----------- 61 H+GHA + + D+L RF R+ G +VL+ GTD G + +AK Sbjct: 54 HMGHALDNTLQDILIRFKRMQGYNVLWMPGTDHAGIATQIKVEEMLAKEEGKSRYDLGRE 113 Query: 62 --AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 + K + D + R + D + + F T + ++ R ++ K+ +KG I Sbjct: 114 KFVERVWEWKKEYGDTIVKQIRSLGASCDWTRERF--TLDDGYYHAVREVFVKLYEKGLI 171 Query: 120 YKG 122 Y+G Sbjct: 172 YRG 174 >gi|281417043|ref|ZP_06248063.1| valyl-tRNA synthetase [Clostridium thermocellum JW20] gi|281408445|gb|EFB38703.1| valyl-tRNA synthetase [Clostridium thermocellum JW20] Length = 875 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 88/274 (32%), Positives = 132/274 (48%), Gaps = 19/274 (6%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 +I DP + W + +T G+ D + K F+P D+ V G DI+ F W A Sbjct: 434 RIEQDPD-TLDTWFSSALWPFSTLGWPDETEDLKY-FYPTDVLVTGYDIIFF----WVAR 487 Query: 279 LLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++ + L K VF HG + G K+SKSLGN IDP+E+I++ G DALR+ L Sbjct: 488 MIFSALEHTGKEPFKYVFIHGIVRDALGRKMSKSLGNGIDPLEIIDKYGTDALRFALTIG 547 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESIL 391 + G D + ++ K + + AN I N SR V M D D P FT SD+ IL Sbjct: 548 TSPGNDLRFSEE--KAESSRNFANKIWN-ASRFVLMNFDDNLDFSKVDPNKFTTSDKWIL 604 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449 S + + +E+ ENM+ + AL ++ + E D Y + KP K + R Y Sbjct: 605 SRVNNLTREVTENMEKFELGIALQKIYEFIWEEFCDWYIELVKPRLYDKDDETRLEA-QY 663 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V V+ LL ++P + +I+ L V DE+ Sbjct: 664 VLNYVLGTAMKLLHPYMPFITEEIYRHLVVDDES 697 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56 ++EK + I PN Q H+GHA + + D+L R+ R+ G L+ GTD Sbjct: 25 DKEKTPFTIVIPPPNITGQLHMGHALDETLQDILIRWKRMQGYCTLWLPGTDHASIATEA 84 Query: 57 KIAKAAQNAGVT 68 KI +A G+T Sbjct: 85 KIVEAMAKEGIT 96 >gi|90019097|gb|ABD84202.1| methionyl-tRNA synthetase-like [Yersinia sp. MH-1] Length = 276 Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 30/263 (11%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +KL ++ A+ Y N H+GH E I AD+ RF R+ G +V F D HG I AQ Sbjct: 6 KKLLVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNEVHFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 GV + + + S+ + ISYD++ T + + ++++++ + G I Sbjct: 66 LGVEPEQMIAEMSQEHQQDFAGFGISYDNYHSTHSDENRELSSLIYRRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160 S Y ++ + D KG A QY A ++P + + Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSAVSGATPV 184 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 E E +FF L A+ + L ++ S L + N++ + SGL+ +SR +G Sbjct: 185 MRESEHFFFDLPAFSEMLQAWTRSG---ALQEQVANKMQEWFDSGLQQWDISRDAPYFGF 241 Query: 219 KIPDDPQYIMYVWIDALTNYLTT 241 ++PD P YVW+DA Y+ + Sbjct: 242 EVPDAPGKYFYVWLDAPIGYMGS 264 >gi|319411893|emb|CBQ73936.1| probable MES1-methionyl-tRNA synthetase [Sporisorium reilianum] Length = 735 Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 128/541 (23%), Positives = 222/541 (41%), Gaps = 85/541 (15%) Query: 7 LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + +++A+ Y N PH+G+ + ADV AR+ R + L+ GTDE+G A Sbjct: 47 ILVTSALPYVNNVPHLGNIIGSTLSADVYARYSRSRNRNTLYICGTDEYGTATETKALED 106 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT + D+ ++ I +D F RTT + + + ++ K+ + G + + + Sbjct: 107 GVTPQQLCDKYHALHAEVYQWFQIGFDHFGRTTTPKQTEIAQDIFLKLHENGYLEERTMT 166 Query: 126 GWYSLRDEAYYNDDEVYK-----GAD----------GQYYNA-----------QHNPVQW 159 + + D V G D GQ Y+A PVQ Sbjct: 167 QLFCQNCVRFLADRYVEGECPRCGYDDARGDQCDKCGQLYDAVELVKPRCKLCSSPPVQ- 225 Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI--SFVKSGLKDLSLSRKTFDWG 217 + F R+ Q L + ++I S+ K GLK SL+R WG Sbjct: 226 KDSRHMFIRIDELQ-PLTEKWAREQAQKGGWSSNGKLITESWFKEGLKPFSLTRD-LKWG 283 Query: 218 IKIP--DDPQYIMYVWIDALTNYLT-TTGYLD-------NPDGSKAKFWPADLHVIGKDI 267 + +P ++YVW DA Y + T Y D NPD K +GKD Sbjct: 284 VPVPIKGMEDKVLYVWFDAPIGYPSITANYTDDWQKWWKNPDNVKL------YQFMGKDN 337 Query: 268 LRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA- 324 +RFH + +P+ L+ + P L + + ++ ++G K SKS N+ + ++G+ A Sbjct: 338 VRFHTVIFPSCLIGSKDPYTLLHHINTTEYLQYEGGKFSKSR-NIGVFGDKARDLGLSAS 396 Query: 325 -LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 RY+L+ D + R N++L +GN +R V +K YD ++P A Sbjct: 397 VWRYYLLANRPETADSQFAWRDFIARNNSELLANLGNFCNR-VLTFMKKYDYVLPAIPAD 455 Query: 384 TE------------------SDESILSVCSR----VLQEIRENMQNQLIHRALAQVISLV 421 +E + S++S +R +L + M+ I L +++L Sbjct: 456 SELHSYKQGAVAAAADGADDASSSVISRFARDVNAILGQYISAMEAVKIRSGLQHMMALS 515 Query: 422 SE-----VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 + V+ +FD L + R V+ V + +I L+ L+ F+P+ ++ I Sbjct: 516 ARGNVFLVESHFDNT----LFTESRARCDEVMIVALNLIWLLSALIHPFMPETSDAILKQ 571 Query: 477 L 477 L Sbjct: 572 L 572 >gi|323703627|ref|ZP_08115270.1| valyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] gi|323531399|gb|EGB21295.1| valyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] Length = 882 Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 84/273 (30%), Positives = 131/273 (47%), Gaps = 26/273 (9%) Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276 G K+ DP ++ W + +T G+ + F+P + V G+DI+ F W Sbjct: 444 GGKMEQDPD-VLDTWFSSALWPFSTLGWPEK-TAELEHFYPTSVLVTGRDIIFF----WV 497 Query: 277 AFLLSANL------PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 A ++ + + P K+VF HG +L +G K+SKSLGN +DP+EVI+ G D+LR+ L Sbjct: 498 ARMIFSGMYNMHEEPF-KEVFIHGLVLDAQGRKMSKSLGNGVDPLEVIDSHGADSLRFML 556 Query: 330 VREIACGKD---GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + G D F DG + AN + N SR V M L DYD G +T + Sbjct: 557 ITGNTPGNDLRFHFERLDGAR-----SFANKLWN-ASRFVMMNLTDYDPAA-QGGPYTLA 609 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRA 444 D ILS + ++ + ++ + A + + SE D Y + KP KT P+ Sbjct: 610 DRWILSRLQGTVADVTDFLERYELGEAARVLYDFIWSEFCDWYIELAKPRLFGKTTPEDR 669 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 T V V+V+R+ LL F+P + +I+ L Sbjct: 670 ITTQQVLVQVLRKTLELLHPFMPFITEEIWQKL 702 Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust. Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 9/110 (8%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56 E++K + PN Q H+GHA + + D+L R+ R+ G + ++ GTD G Sbjct: 37 EKDKKPFCIVMPPPNVTGQLHMGHALDNTLQDILTRWRRMQGYNAMWVPGTDHAGIATQA 96 Query: 57 KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106 K+ + G+T D F + Y + I T +R +C Sbjct: 97 KVEEQLAKEGLTK---YDLGREKFLERVWAWKEQYGNRITTQLRRLGASC 143 >gi|282850551|ref|ZP_06259930.1| valine--tRNA ligase [Veillonella parvula ATCC 17745] gi|282580044|gb|EFB85448.1| valine--tRNA ligase [Veillonella parvula ATCC 17745] Length = 885 Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 10/230 (4%) Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVI 311 +++P + V G DI+ F L +P K VF HG + +G K+SKSLGN I Sbjct: 477 QWYPTSVLVTGYDIIFFWVARMIFMALEFEHEIPFKHVFIHGLVRDSQGHKMSKSLGNGI 536 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 +P+EVI++ G DALR+ LV G D FY + + N + AN I N S+ V M L Sbjct: 537 NPLEVIDQYGADALRFTLVTGNTPGNDMRFYME---RVEANRNFANKIWN-ASKFVLMNL 592 Query: 371 KDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY 427 +YD +PT T SD+ I+ + +Q + N+ + A + V + + D Y Sbjct: 593 TNYDESFVPTADDLTLSDQWIVQKYNETVQSVTSNLDKFELGEAASSVYDFIWNTYCDWY 652 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + KP ++N TV Y+ V ++R + LL F+P + I+ L Sbjct: 653 IELAKPRLYSESNERDRRTVQYLLVIILRHMLELLHPFMPFVTEHIWQHL 702 Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 11/55 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75 H+GHA + + D+L RF R+ G +VL+ GTD +AG+ T++ V++ Sbjct: 54 HMGHALDNTLQDILIRFKRMQGYNVLWMPGTD-----------HAGIATQIKVEE 97 >gi|294794041|ref|ZP_06759178.1| valine--tRNA ligase [Veillonella sp. 3_1_44] gi|294455611|gb|EFG23983.1| valine--tRNA ligase [Veillonella sp. 3_1_44] Length = 885 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 73/230 (31%), Positives = 114/230 (49%), Gaps = 10/230 (4%) Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVI 311 +++P + V G DI+ F L +P K VF HG + +G K+SKSLGN I Sbjct: 477 QWYPTSVLVTGYDIIFFWVARMIFMALEFEHEIPFKHVFIHGLVRDSQGRKMSKSLGNGI 536 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 +P+EVI++ G DALR+ LV G D FY + + N + AN I N S+ V M L Sbjct: 537 NPLEVIDQYGADALRFTLVTGNTPGNDMRFYME---RVEANRNFANKIWN-ASKFVLMNL 592 Query: 371 KDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY 427 +YD +PT T +D+ I+ + +Q + N+ + A + V + + D Y Sbjct: 593 TNYDESFVPTADDLTLADQWIVQKYNETVQSVTSNLDKFELGEAASSVYDFIWNTYCDWY 652 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + KP ++N TV Y+ V ++R + LL F+P + I+ L Sbjct: 653 IELAKPRLYSESNERDRRTVQYLLVTILRHMLELLHPFMPFVTEHIWQHL 702 Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 11/55 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75 H+GHA + + D+L RF R+ G +VL+ GTD +AG+ T++ V++ Sbjct: 54 HMGHALDNTLQDILIRFKRMQGYNVLWMPGTD-----------HAGIATQIKVEE 97 >gi|269798312|ref|YP_003312212.1| valyl-tRNA synthetase [Veillonella parvula DSM 2008] gi|269094941|gb|ACZ24932.1| valyl-tRNA synthetase [Veillonella parvula DSM 2008] Length = 885 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 73/230 (31%), Positives = 114/230 (49%), Gaps = 10/230 (4%) Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVI 311 +++P + V G DI+ F L +P K VF HG + +G K+SKSLGN I Sbjct: 477 QWYPTSVLVTGYDIIFFWVARMIFMALEFEHEIPFKHVFIHGLVRDSQGRKMSKSLGNGI 536 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 +P+EVI++ G DALR+ LV G D FY + + N + AN I N S+ V M L Sbjct: 537 NPLEVIDQYGADALRFTLVTGNTPGNDMRFYME---RVEANRNFANKIWN-ASKFVLMNL 592 Query: 371 KDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY 427 +YD +PT T +D+ I+ + +Q + N+ + A + V + + D Y Sbjct: 593 TNYDESFVPTADDLTLADQWIVQKYNETVQSVTSNLDKFELGEAASSVYDFIWNTYCDWY 652 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + KP ++N TV Y+ V ++R + LL F+P + I+ L Sbjct: 653 IELAKPRLYSESNERDRRTVQYLLVTILRHMLELLHPFMPFVTEHIWQHL 702 Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 11/55 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75 H+GHA + + D+L RF R+ G +VL+ GTD +AG+ T++ V++ Sbjct: 54 HMGHALDNTLQDILIRFKRMQGYNVLWMPGTD-----------HAGIATQIKVEE 97 >gi|46128473|ref|XP_388790.1| hypothetical protein FG08614.1 [Gibberella zeae PH-1] Length = 673 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 119/545 (21%), Positives = 219/545 (40%), Gaps = 75/545 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + +++A+ Y N PH+G+ ++ ADV +R+ + G + ++ G+DE+G A Sbjct: 13 KRNILVTSALPYVNNIPHLGNIIGSVLSADVFSRYCKARGYNTIYICGSDEYGTATETKA 72 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT---------------------EKR 101 G++ + + + D I +D F RT E+R Sbjct: 73 LEEGLSPADLCAKYHALHKGVYDWFRIDFDIFGRTPTQQQTQIVQQIFKELWKNGYIEER 132 Query: 102 --------HHDTCRILWKKI--------------SDKGDIYKGCYSGWYSLRDEAYYNDD 139 H + + L + D+ D G + R+ + DD Sbjct: 133 ETTQPFCTHANHGKFLADRFVEGECSICHDLGARGDQCDACGGLLDPFEPEREPSASEDD 192 Query: 140 EVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRN 194 V A G N + + + + F RL A +D L+ ++ +S E + Sbjct: 193 HVEAKATGFLINPRCKVDGTTPEKRKTKHLFLRLDAVKDLLVPWFHKSSKEGDWSANCIS 252 Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDD---------PQYIMYVWIDALTNYLTTTGYL 245 S++ GL ++R WG+ IP D + + YVW DA Y++ T L Sbjct: 253 ITQSWIDKGLLPRGITRD-LKWGVPIPQDLEGLSNEEYAEKVFYVWFDACIGYVSITKNL 311 Query: 246 ---DNPDGSKAKFW---PADLHV---IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHG 294 DN DG+ + W P ++ + +GKD + FH I +PA L N K+ + Sbjct: 312 VDGDNLDGTNWEKWWKNPENVKLYQFMGKDNVPFHTIIFPASQLGTGENWTKVHKMSTTE 371 Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNA 352 ++ ++G K SKS G + +E GV D RY+L+ D + N Sbjct: 372 YLNYEGGKFSKSRGVGVFG-NTAKETGVDPDVWRYYLLSRRPETADSEFKWQEFIDCNNN 430 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIH 411 DL +GNL R + DG++P +T E E + L+ + Sbjct: 431 DLLKNLGNLNQRILKFAQLKLDGVVPDYTKYTDERLEEHKKEVNEALKTFIAQFDAIKLR 490 Query: 412 RALAQVISLVSEVDRYF-DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 LA V+ + + ++ D++ +L P+R + V+ + + ++ LA ++ ++P + Sbjct: 491 AGLASVMHISALGNKLLQDSKLNNQLLAEEPERCAAVIGLGINHLQLLASIVYPYMPSTS 550 Query: 471 NKIFD 475 + I + Sbjct: 551 DAILE 555 >gi|240274148|gb|EER37666.1| methionine-tRNA synthetase [Ajellomyces capsulatus H143] Length = 616 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 124/544 (22%), Positives = 234/544 (43%), Gaps = 59/544 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLAR--FHRLDGLDVLFTTGTDEHGQKIA 59 K + + I++A+ Y N PH+G+ I+ VL+ + + G L+ GTDE+G Sbjct: 11 KGQRNVLITSALPYVNNVPHLGN----IVGSVLSADVYQKACGRPTLYICGTDEYGTATE 66 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A GVT + + ++ +++ + +I +D F RT +H + + ++K++ D G + Sbjct: 67 TKALEEGVTPEELCAKYNKIHQEVYEWFEIGFDIFGRTPTAQHTEISQAIFKRLYDNGFL 126 Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEE 162 + + + +++ D V Y A G Q H NP ++ Sbjct: 127 EEKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLDG 186 Query: 163 EGYFFRLSAY----QDKLLSYYES--HPEFI---LPIERRNEVISFVKSGLKDLSLSRKT 213 R + + DKL E+ HP P R S++K GLKD ++R Sbjct: 187 ATPVRRNTKHIHLLLDKLQPEIEAWVHPAIEKGDWPKNSRVITESWLKEGLKDRGITRD- 245 Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IGK 265 WG+ +P D + ++YVW +A Y + T PD + W P ++ + +GK Sbjct: 246 LKWGVPVPLDGYEKKVLYVWFEACIGYPSITANY-TPD---WELWWRDPDNVQLYQFLGK 301 Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322 D + FH++ +P + K + + ++ ++ K SKS G + E V Sbjct: 302 DNVPFHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKETGVPA 361 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTP 380 D RY+L++ D ++ N +L +GNLV+R V +I K Y +P Sbjct: 362 DVWRYYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSTVPD- 420 Query: 381 GAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELK 437 FT E + +L + +L++ M+ + +A + +V + + K L Sbjct: 421 --FTVPEPFKPVLGEVTTLLRQYITEMEGVHLRAGVATAMRIVEVGNGLIQSNKLDNSLI 478 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497 + P+RA++V+ + ++ + + + P+ A+ F + DE + +KPG Sbjct: 479 ASEPERAASVVGIHLQPVPAGHVSVD---PRTAHVPFANIPSLDELKDEGWKPALIKPGH 535 Query: 498 MLHK 501 + K Sbjct: 536 QIGK 539 >gi|270013434|gb|EFA09882.1| hypothetical protein TcasGA2_TC012030 [Tribolium castaneum] Length = 232 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 103/196 (52%), Gaps = 14/196 (7%) Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS NV+ P + E D LRYFL+RE DG Y + + +N++LA+ +GNL+ Sbjct: 1 MSKSKNNVVCPFQRSEIYSSDGLRYFLLREGVAHSDGNYSDTKVIRILNSELADTLGNLL 60 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVLQEIRE-------NMQNQLIHRA 413 SR L + P + ES+ S V ++++++ + N ++A Sbjct: 61 SRCCGTALNPHQTF---PKIEASAFESVASSDVTKKLIEDVATLPDVCMGHYSNFNFYKA 117 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLAN 471 + +VI+ + + + +F+ KPWELKK + VL++T+E +R ILLQ +P +A+ Sbjct: 118 VDRVIATLHQANLFFETFKPWELKKESAKTRELDVVLHLTLETLRVCGILLQPIIPNIAS 177 Query: 472 KIFDILFVADENRCFQ 487 + + + VA E R F Sbjct: 178 NLLNKINVARERRTFS 193 >gi|331092376|ref|ZP_08341202.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA] gi|330401400|gb|EGG80986.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA] Length = 882 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 105/423 (24%), Positives = 180/423 (42%), Gaps = 81/423 (19%) Query: 137 NDDEVYKGADGQY-----YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE------ 185 NDD G+Y Y A+ V +E EGY ++ + + ++ H Sbjct: 299 NDDATINEHGGKYAGMERYEARKAIVADLEAEGYLVKIEEHTHNVGTHDRCHTTVEPLIK 358 Query: 186 ---FILPIERRNEVISFVKSG-------------------LKDLSLSRKTFDWGIKIP-- 221 F+ E I+ +K+G ++D +SR+ + WG +IP Sbjct: 359 QQWFVKMEELAKPAINALKTGELKFVPERFNKTYLHWLENIRDWCISRQIW-WGHRIPAY 417 Query: 222 ------------DDPQYIMYV--------------WIDALTNYLTTTGYLDNPDGSKA-- 253 + P+ + W + +T G+ PD ++ Sbjct: 418 YCDECGEFVVAREMPEKCEHCGCTHFTQDEDTLDTWFSSALWPFSTLGW---PDSTEELD 474 Query: 254 KFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNV 310 F+P D+ V G DI+ F I + F + P VF HG + +G K+SKSLGN Sbjct: 475 YFYPTDVLVTGYDIIFFWVIRMVFSGFAHTGKSPF-HTVFIHGLVRDSQGRKMSKSLGNG 533 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 IDP+E+IE+ G DALR LV A G D FYD+ + N + AN + N SR + M Sbjct: 534 IDPLEIIEQYGADALRMTLVTGNAPGNDMRFYDE---RVEANRNFANKVWN-ASRFIMMN 589 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427 +++ + P+ T +D+ ILS + + +++ ENM + AL +V + + D Y Sbjct: 590 MEEKEITTPSESDLTATDKWILSKVNTLAKDVTENMDKFELGIALQKVYDFIWDEFCDWY 649 Query: 428 FDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 + K + + + D A+ L+ V+ +L ++P ++ +I+ L +E+ Sbjct: 650 IELAK-YRIYHADDDAVSANAALWTLKTVLANGLKMLHPYMPFVSEEIYSALVPEEESLM 708 Query: 486 FQS 488 S Sbjct: 709 MSS 711 >gi|238018913|ref|ZP_04599339.1| hypothetical protein VEIDISOL_00773 [Veillonella dispar ATCC 17748] gi|237864397|gb|EEP65687.1| hypothetical protein VEIDISOL_00773 [Veillonella dispar ATCC 17748] Length = 885 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 91/352 (25%), Positives = 154/352 (43%), Gaps = 42/352 (11%) Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 M + +F + + L + H +P ++++++ ++D ++SR+ + WG + Sbjct: 359 MVSKQWFVDMKPLAEPALKVVKDHEVEFVPERFTKTYVNWLEN-IRDWTISRQLW-WGHR 416 Query: 220 IP----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251 IP DP ++ W + T G+ + Sbjct: 417 IPAWYCDDCGETIVSREDINECPHCHGHVTQDPD-VLDTWFSSGLWPFATMGWPEQTPEL 475 Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGN 309 K +++P + V G DI+ F L +P K VF HG + +G K+SKSLGN Sbjct: 476 K-QWYPTSVLVTGYDIIFFWVARMIFMALEFEHEIPFKHVFIHGLVRDSQGRKMSKSLGN 534 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 I+P+EVI++ G DALR+ LV G D FY + + N + AN I N S+ V M Sbjct: 535 GINPLEVIDQYGADALRFTLVTGNTPGNDMRFYME---RVEANRNFANKIWN-ASKFVLM 590 Query: 369 ILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVD 425 L +YD +PT T +D+ I+ + +Q + N+ + A + V + + D Sbjct: 591 NLTNYDESFVPTADDLTLADQWIVQKYNETVQSVTSNLDKFELGEAASSVYDFIWNTYCD 650 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y + KP N TV Y+ V ++R + LL F+P + I+ L Sbjct: 651 WYIELAKPRLYNDGNERDRRTVQYLLVTILRHMLELLHPFMPFVTEHIWQHL 702 Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 23/123 (18%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKA----------- 61 H+GHA + + D+L RF R+ G +VL+ GTD G + +AK Sbjct: 54 HMGHALDNTLQDILIRFKRMQGYNVLWMPGTDHAGIATQIKVEEMLAKEEGKSRYDLGRE 113 Query: 62 --AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 + K + D + R + D S + F T ++ ++ R ++ + +KG I Sbjct: 114 KFVERVWEWKKEYGDTIVKQIRSLGASCDWSRERF--TLDEGYYHAVREVFVSLYEKGLI 171 Query: 120 YKG 122 Y+G Sbjct: 172 YRG 174 >gi|167759909|ref|ZP_02432036.1| hypothetical protein CLOSCI_02273 [Clostridium scindens ATCC 35704] gi|167662528|gb|EDS06658.1| hypothetical protein CLOSCI_02273 [Clostridium scindens ATCC 35704] Length = 883 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 103/418 (24%), Positives = 182/418 (43%), Gaps = 81/418 (19%) Query: 137 NDDEVYKGADGQY-----YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE------ 185 NDD G+Y Y A+ V+ +EE+GY ++ + + ++ H Sbjct: 299 NDDATINENGGKYAGMERYEARKVMVKDLEEQGYLVKVVPHSHNVGTHDRCHTTVEPMVK 358 Query: 186 ---FILPIERRNEVISFVKSG-------------------LKDLSLSRKTFDWGIKIP-- 221 F+ E I VK+G ++D +SR+ + WG +IP Sbjct: 359 QQWFVRMEELAKPAIEAVKNGDLKFVPERFDKIYLHWLENIRDWCISRQIW-WGHRIPAY 417 Query: 222 ------------DDPQYI--------------MYVWIDALTNYLTTTGYLDNPDGSKAKF 255 D P+ + W + +T G+ + + F Sbjct: 418 YCDECGDIVVSCDVPEKCPKCGCTHFTQDEDTLDTWFSSALWPFSTLGWPEKTEDLDY-F 476 Query: 256 WPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312 +P D+ V G DI+ F I + + + P VF HG + +G K+SKSLGN ID Sbjct: 477 YPTDVLVTGYDIIFFWVIRMVFSGYAHTGKTPF-HTVFIHGLVRDSQGRKMSKSLGNGID 535 Query: 313 PIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMI 369 P+E+IE+ G DALR L+ A G D FY+ +RV A + AN + N SR + M Sbjct: 536 PLEIIEQYGADALRMTLITGNAPGNDMRFYN-----ERVEASRNFANKVWN-ASRFIMMN 589 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427 ++D + P +D I+S C+ +++++ ENM + AL+++ + + D Y Sbjct: 590 IEDKEITEPADFKLRPADRWIMSKCNNLVKDVTENMDKYELGIALSKIYDFMWDEFCDWY 649 Query: 428 FDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 + K + + D+ A+ ++ EV+++ LL ++P ++ +I+ L +E+ Sbjct: 650 IEIAK-YRIYHVEEDQKSANDAMWTLREVLKKSLKLLHPYMPFVSEEIYGKLVPEEES 706 Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 +R + +T + PN + H+GHA + + D+L R+ R+ G + L+ GTD Sbjct: 33 DRSRKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMQGYNALWVPGTD 84 >gi|312898925|ref|ZP_07758313.1| valyl-tRNA synthetase [Megasphaera micronuciformis F0359] gi|310620087|gb|EFQ03659.1| valyl-tRNA synthetase [Megasphaera micronuciformis F0359] Length = 887 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 86/269 (31%), Positives = 128/269 (47%), Gaps = 22/269 (8%) Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 I DP ++ W + +T G+ D PD F+P + V G DI+ F W A Sbjct: 447 IHQDPD-VLDTWFSSALWPFSTMGWPDKTPDLQH--FFPTSVLVTGYDIIFF----WVAR 499 Query: 279 LLSANLPLPKKV-----FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++ A K+V F HG + +G K+SKSLGN IDP+EV + G DALR+ LV Sbjct: 500 MMFATCEFMKEVPFKDVFIHGLVRDSQGRKMSKSLGNGIDPLEVSDMYGADALRFTLVTG 559 Query: 333 IACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESI 390 G D FY + + N + AN I N S+ V M L+DYD +PT FT +D I Sbjct: 560 NTPGNDMRFYME---RVEANRNFANKIWN-ASKFVIMNLEDYDPEFVPTTDDFTLADRWI 615 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVL 448 L+ ++V++++ + + + + A A V S D Y + K K + T Sbjct: 616 LTSFNQVVRQVTKGLDSYELGDAAATVYDFTWNSFCDWYIELAKQRLYKSDDKRSRQTAQ 675 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477 YV V V+ LL F+P + ++ L Sbjct: 676 YVLVRVLTGALALLHPFMPFVTEHLWQHL 704 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 13/69 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S + PN Q H+GHA + + D+L RF R+ G +V++ GTD +AG+ Sbjct: 42 SIVMPPPNVTGQLHMGHALDNTLQDILIRFKRMSGYNVVWIPGTD-----------HAGI 90 Query: 68 TTKVFVDQN 76 T+V V++ Sbjct: 91 ATQVKVEEQ 99 >gi|294792176|ref|ZP_06757324.1| valine--tRNA ligase [Veillonella sp. 6_1_27] gi|294457406|gb|EFG25768.1| valine--tRNA ligase [Veillonella sp. 6_1_27] Length = 885 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 114/230 (49%), Gaps = 10/230 (4%) Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVI 311 +++P + V G DI+ F L +P K VF HG + +G K+SKSLGN I Sbjct: 477 QWYPTSVLVTGYDIIFFWVARMIFMALEFEHEIPFKHVFIHGLVRDSQGRKMSKSLGNGI 536 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 +P+EVI++ G DALR+ LV G D FY + + N + AN I N S+ V M L Sbjct: 537 NPLEVIDQYGADALRFTLVTGNTPGNDMRFYME---RVEANRNFANKIWN-ASKFVLMNL 592 Query: 371 KDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY 427 +YD +PT T +D+ I+ + +Q + N+ + A + V + + D Y Sbjct: 593 TNYDESFVPTADDLTLADQWIVQKYNETVQSVTSNLDKFELGEAASSVYDFIWNTYCDWY 652 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + KP +++ TV Y+ V ++R + LL F+P + I+ L Sbjct: 653 IELAKPRLYSESDERDRRTVQYLLVTILRHMLELLHPFMPFVTEHIWQHL 702 Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 11/55 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75 H+GHA + + D+L RF R+ G +VL+ GTD +AG+ T++ V++ Sbjct: 54 HMGHALDNTLQDILIRFKRMQGYNVLWMPGTD-----------HAGIATQIKVEE 97 >gi|327277846|ref|XP_003223674.1| PREDICTED: LOW QUALITY PROTEIN: methionyl-tRNA synthetase, cytoplasmic-like [Anolis carolinensis] Length = 908 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 81/328 (24%), Positives = 152/328 (46%), Gaps = 22/328 (6%) Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLT-TTGYLDNPDGSKAK 254 S+++ GLK ++R WG +P D + YVW DA YL+ Y D + K Sbjct: 491 SWIRDGLKPRCITRD-LKWGTPVPLDGFRDKVFYVWFDAPIGYLSIAANYTDQWE----K 545 Query: 255 FW--PADLHV---IGKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSL 307 +W P + + + KD + FH++ +P LL L + + ++ ++ K SKS Sbjct: 546 WWKNPEQVQLYNFMAKDNVPFHSVVFPCTLLGTGDKYTLVNHLIATEYLNYEDGKFSKSR 605 Query: 308 G-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 G V + + D R++L+ +D + L + N++L N +GN ++R+ Sbjct: 606 GVGVFGDMAKDTGIPSDIWRFYLLYLRPESQDSAFSWTDLMTKNNSELLNTLGNFINRAG 665 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 S + K + G +P + D+ +L+ + L++ ++ I AL ++++ + Sbjct: 666 SFVCKFFGGHVPA-MELNQDDKRLLAHITLELRQYNYLLEKVKIREALRSILNMARHGNH 724 Query: 427 YFDAQKPWE-LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADE 482 Y +PW+ +K + D RA TV+ V V + L+++LQ ++P ++ I L + AD Sbjct: 725 YLQVNEPWKHIKGSEADKKRAGTVIGVAVNIASLLSVVLQPYMPNVSATIQQQLSIPADY 784 Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 N L G + T P+F + Sbjct: 785 NVVSNDFVCTLPAGHQI-GTVTPLFQKL 811 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + + I++A+ Y N PH+G+ ++ AD AR+ RL + L+ GTDE+G A Sbjct: 271 KNVLITSALPYVNNVPHLGNIIGCVLSADTFARYCRLRNWNTLYLCGTDEYGTATETKAM 330 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96 G+T + D+ + +IS+D F R Sbjct: 331 EEGLTPQQICDKYYAVHDQIYKWFNISFDFFGR 363 >gi|254568272|ref|XP_002491246.1| Methionyl-tRNA synthetase, forms a complex with glutamyl-tRNA synthetase (Gus1p) and Arc1p [Pichia pastoris GS115] gi|238031043|emb|CAY68966.1| Methionyl-tRNA synthetase, forms a complex with glutamyl-tRNA synthetase (Gus1p) and Arc1p [Pichia pastoris GS115] gi|328352235|emb|CCA38634.1| methionyl-tRNA synthetase [Pichia pastoris CBS 7435] Length = 744 Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 108/516 (20%), Positives = 213/516 (41%), Gaps = 49/516 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD+ ARF + + LF GTDE+G A Sbjct: 190 ILITSALPYVNNVPHLGNIVGSVLSADIYARFCKARNYNTLFICGTDEYGTATETKALEE 249 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG-------- 117 VT + + + D+ I +D F RTT + + + ++ K+ + G Sbjct: 250 NVTPRELCTKYHKIHSDVYKWFQIGFDYFGRTTTELQTEIAQDIFMKLYNNGYLEEQSMR 309 Query: 118 DIYKGCYSGWYSLR------DEAYYND---DEVYKGAD-----------GQYYNAQHNPV 157 +Y ++G+ + R + +Y D D+ K + NA P Sbjct: 310 QLYCPVHNGFLADRYVEGECPKCHYEDARGDQCDKCGTLLDPFELINPRCKLDNASPEP- 368 Query: 158 QWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 + F L + L + ++ E R S++K GL ++R W Sbjct: 369 --KNSDHIFLSLDKLEPPLREWVAKASEEGKWSKNSRTITDSWIKEGLLPRCITRDLV-W 425 Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILR 269 G +P D + ++YVW DA Y++ T N ++W HV +GKD + Sbjct: 426 GTPVPLDGFEKKVLYVWFDATIGYISITA---NYTKHWKEWWKNPDHVDLYQFMGKDNVP 482 Query: 270 FHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALR 326 FH + +PA + + + + ++ ++G K SKS G V + R Sbjct: 483 FHTVVFPASEIGTGDKWTMLHHLSTTEYLQYEGGKFSKSRGIGVFGNNAQDSGIPPSVWR 542 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTE 385 Y+L D + + N +L +GN V+R + Y+G++P + E Sbjct: 543 YYLASIRPESSDSQFSWGEFVSKNNNELLANLGNFVNRLTKFVNAKYNGVVPDYDVSNCE 602 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTNPDRA 444 + E ++ + +L++ +++ + + L + L + +++ D + L P ++ Sbjct: 603 NYEVLVRDVNAILKQYLIDLEGVHLRKGLEVAMQLSARGNQFLQDNKLDNSLYNDKPAKS 662 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 V+ + + +I + ++ ++P+ +I IL A Sbjct: 663 DAVVAIGLNLIYLVGSVIYPYMPETTTQINQILNTA 698 >gi|320581006|gb|EFW95228.1| Methionyl-tRNA synthetase [Pichia angusta DL-1] Length = 754 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 103/517 (19%), Positives = 214/517 (41%), Gaps = 49/517 (9%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD+ AR+ + + ++ GTDE+G A Sbjct: 200 ILITSALPYVNNVPHLGNIVGSVLSADIYARYCKRRNYNAIYICGTDEYGTATETKALED 259 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 VT + D+ D+ I +D F RTT + + + ++ K+ + G + + Sbjct: 260 KVTPQELCDKYHAVHSDVYKWFQIGFDHFGRTTTPKQTEIAQEMFLKLYNNGYLEEKVMK 319 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK-- 175 + + + D V Y+ A G + N + E +L + + Sbjct: 320 QLFCPVHKGFLADRYVEGECPRCHYEDARGDQCDKCGNLLDPFELINPRCKLDGHTPEPR 379 Query: 176 -----LLSYYESHPEFILPIERRNE-----------VISFVKSGLKDLSLSRKTFDWGIK 219 +S + PE I +E S++K GL+ ++R WG Sbjct: 380 ESNHIFISLDKLEPEVRKWIGEASEKGKWSKNSKTITNSWLKEGLQPRCITRD-LTWGTP 438 Query: 220 IPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHA 272 +P ++YVW DA Y++ T N +W HV +GKD + FH Sbjct: 439 VPLKGFENKVLYVWFDAPIGYISITA---NYTDEWRDWWQNPEHVQLYQFMGKDNVPFHT 495 Query: 273 IYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFL 329 + +P+ + + + + ++ ++G K SKS G V V RY+L Sbjct: 496 VVFPSTEIGTKEKWTMLHHLNTTEYLQYEGGKFSKSRGIGVFGNNAEATGVSPSVWRYYL 555 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD-- 387 +D + R N++L +GN V+R ++ Y+G++P+ F D Sbjct: 556 ASVRPENQDSQFSWYEFVTRNNSELLANLGNFVNRLAKFVIAKYNGVVPS---FRTEDCP 612 Query: 388 --ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444 +L + +++ ++M+ + + L + + + + + K L P+++ Sbjct: 613 VYPELLKDLNSLVKTYVDDMETVHLRKGLETAMMISARGNLFLQENKLDNSLYNDFPEKS 672 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 V+ + + ++ ++ ++ ++P+ + +I +IL V + Sbjct: 673 DAVVAIGLNIVYLVSAVIAPYMPETSKQIEEILRVPE 709 >gi|206895183|ref|YP_002246881.1| valyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] gi|206737800|gb|ACI16878.1| valyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] Length = 866 Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 98/382 (25%), Positives = 168/382 (43%), Gaps = 53/382 (13%) Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 +L ++ Y E YK A G H V+ M + +F +L+A D+ E+ I+ Sbjct: 326 ALEEQGYLEKVEPYKHAVGHCQRC-HTVVEPMLSDQWFVKLTAMADEAKRVVETGEVQII 384 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQYI----------------- 227 P ER +V ++D +SR+ + WG +IP ++ Y+ Sbjct: 385 P-ERWIKVYQDWMDNIRDWCISRQIW-WGHRIPVYTCEECGYVFASEEETVEQCPKCGGP 442 Query: 228 -------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAF 278 + W + G+ + + K ++P L + G DIL F + + A Sbjct: 443 VKQEDDVLDTWFSSSLWPFEVFGWPEETEDLKY-YYPTSLLITGYDILFFWVARMIFMAT 501 Query: 279 LLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337 L+ +P ++VF HG +L + G+K+SKS GN +DP+++I+E DALRY LV ++ G Sbjct: 502 TLTGQIPF-EEVFLHGLVLDEHGQKMSKSKGNTVDPMDMIDEYSADALRYALVSAMSLGG 560 Query: 338 DGFYDKDGLKKRV--NADLANGIGNLVSRSVSMILKDYDG--MIPTPGAFTESDESILSV 393 D + + RV +L N I N S +L +G + TP F+ +D ILS Sbjct: 561 Q---DVNFSESRVEHGKNLTNKIWN----SARYVLSVLEGKQLDTTPNQFSIADRYILSR 613 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 + Q + E + AL ++ S Y+ W ++ + D + + E Sbjct: 614 LEQTKQFVSECFEAYDFGAALREIESF------YWSEYCDWYIEMSKVDPNYSTYWTLKE 667 Query: 454 VIRQLAILLQAFVPKLANKIFD 475 V+ Q L F+P + +I+D Sbjct: 668 VLEQSLKLFHPFLPFVTQEIWD 689 Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 20/142 (14%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56 ++ K S I PN HIGHA ++ + D + R+ +++G +V + GTD G Sbjct: 33 DKAKPRFSIVIPPPNVTGSLHIGHALDLSLQDAIVRYKKMNGFNVCWVPGTDHAGIATQN 92 Query: 57 KIAKAAQNAGVTTK-----VFVDQ----NSRNFRDMADVLD-----ISYDDFIRTTEKRH 102 + +A G+ + VF+++ R + D + + +D T + Sbjct: 93 VVERALLQQGIRRQDLGREVFLEKVWEWKERYGNTILDQITRLGCGVDWDRLRFTMDPVC 152 Query: 103 HDTCRILWKKISDKGDIYKGCY 124 R +K++ D+G IYKG Y Sbjct: 153 ARAVRRAFKELFDRGLIYKGHY 174 >gi|153864441|ref|ZP_01997343.1| Methionyl-tRNA synthetase, class Ia [Beggiatoa sp. SS] gi|152146065|gb|EDN72658.1| Methionyl-tRNA synthetase, class Ia [Beggiatoa sp. SS] Length = 407 Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 68/236 (28%), Positives = 104/236 (44%), Gaps = 22/236 (9%) Query: 255 FWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309 FW D H IGKDI FH ++WPA L + P VF HGF+ GEK+SKS G Sbjct: 41 FWGKDSQAELYHFIGKDIQYFHCLFWPAMLTAGGFRNPTAVFVHGFLKVDGEKMSKSRGT 100 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 I+ + + + LRY+ ++ G D + D RVNADL N+ SR Sbjct: 101 FINARTYLNYLKPEYLRYYFAAKLGYGVDDVDLNLDDFLHRVNADLVGKFVNIASRCAKF 160 Query: 369 ILKDYDGMIPT----PGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 I ++G + + P + DE I E + + ++A+ +++L Sbjct: 161 ITNRFEGQLASELVEPALYQHFIDEG---------NAIAEAYETRDYNKAVRHIMALADR 211 Query: 424 VDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++Y + KPW + K A V + + R L L +P L +K+ D L Sbjct: 212 ANQYIEEHKPWVIAKQAGQEAELQGVCSQGLNLFRVLMGYLAPILPLLTSKVEDFL 267 >gi|325660697|ref|ZP_08149326.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] gi|331085577|ref|ZP_08334661.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] gi|325473004|gb|EGC76213.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] gi|330407464|gb|EGG86966.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 882 Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 14/242 (5%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P D+ V G DI+ F I + + + P +F HG I +G K+SKSLGN I Sbjct: 476 FYPTDVLVTGYDIIFFWVIRMVFSGYAYTGKAPFHTVLF-HGLIRDSQGRKMSKSLGNGI 534 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 DP+E+IE+ G DALR LV A G D FYD+ + N + AN + N SR + M + Sbjct: 535 DPLEIIEKYGADALRITLVTGNAPGNDMRFYDE---RVEANRNFANKVWN-ASRFILMNM 590 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428 + + +P + D+ I+S + + +++ ENM + A+ +V + + D Y Sbjct: 591 EGKEITVPNESDLSAVDQWIISKMNTLTKDVTENMDKFELGIAVQKVYDFIWDEFCDWYI 650 Query: 429 DAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 + K + + + NP A++ LY V+ LL F+P + +I+ L +E+ Sbjct: 651 ELAK-YRIYHAEENPAAANSALYTLKTVLGDALKLLHPFMPFVTEEIYGALVPEEESLMM 709 Query: 487 QS 488 S Sbjct: 710 SS 711 Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 +R K +T + PN + H+GHA++ + D+L R+ R+ G + L+ GTD Sbjct: 33 DRSKKPFTTVMPPPNITGKLHMGHAFDNTLQDILIRYKRMQGYNALWIPGTD 84 >gi|291166072|gb|EFE28118.1| valine--tRNA ligase [Filifactor alocis ATCC 35896] Length = 885 Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 99/402 (24%), Positives = 177/402 (44%), Gaps = 60/402 (14%) Query: 122 GCYSGW--YSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171 G Y+G Y R E N +E + A G Y HN V+ M + +F ++ Sbjct: 313 GKYAGMSRYECRKEIVKNLEEAGLLVSVKDHAHAVGHCYRC-HNVVEPMVSKQWFVKMKD 371 Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------- 221 L E+ ++P +R +++ + ++D +SR+ + WG +IP Sbjct: 372 LAQPALEALETKKLNLVP-DRFDKIYNMWLENIRDWCISRQLW-WGHRIPAYYCEDCGEM 429 Query: 222 ------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLH 261 + + ++ W + ++T G+ P+ + +F+P Sbjct: 430 IVAKQKPERCYKCHSANLEQDEDVLDTWFSSALWPMSTLGW---PEETPEMFRFFPTSTL 486 Query: 262 VIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIE 318 V G DI+ F I + + L +P K VF HG + +G K+SKSLGN IDP+E+I+ Sbjct: 487 VTGYDIIFFWVIRMVFSSLYLKKEVPF-KDVFIHGLVRDDQGRKMSKSLGNGIDPLEIID 545 Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 G DALR+ L G D + + ++ N AN + N SR + M L++Y ++ Sbjct: 546 HYGADALRFMLASSNTPGNDMRFYMERVESARN--FANKLWN-ASRFILMNLEEYQPVLT 602 Query: 379 TPGA----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQV--ISLVSEVDRYFDAQK 432 T F D+ I+S+ ++V +E+ +N+ + A ++ + + D Y + K Sbjct: 603 TREEVEPYFELGDKWIISLSNKVAKEVSDNLDKYELSLAADKIYDFTWSNFCDWYIEMVK 662 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 P L T LY V++++ LL F+P + +I+ Sbjct: 663 P-RLYGEAGSEKDTALYTLQYVLKKILKLLHPFMPFITEEIY 703 Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 25/136 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------------ 55 S + PN Q H+GHA + + D+L R+ R+ G D L+ GTD Sbjct: 43 SIVLPPPNITGQLHMGHALDHTLQDILIRYKRMQGYDTLWQPGTDHASIATEVKVVERIR 102 Query: 56 QKIAKAAQNAG---------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106 Q + K + G + F D+ + + D D S + F T ++ ++ Sbjct: 103 QTLGKTKEEIGREEFLKHAWAWKEEFGDRIVEQMKKLGDSCDWSRERF--TMDEGCNEAV 160 Query: 107 RILWKKISDKGDIYKG 122 + K+ ++G IY+G Sbjct: 161 LEFFVKLYEEGYIYRG 176 >gi|167037935|ref|YP_001665513.1| valyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167040834|ref|YP_001663819.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|300914869|ref|ZP_07132185.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X561] gi|307723897|ref|YP_003903648.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X513] gi|320116350|ref|YP_004186509.1| valyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166855074|gb|ABY93483.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|166856769|gb|ABY95177.1| valyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|300889804|gb|EFK84950.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X561] gi|307580958|gb|ADN54357.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X513] gi|319929441|gb|ADV80126.1| valyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 879 Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 95/325 (29%), Positives = 152/325 (46%), Gaps = 51/325 (15%) Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY---------- 226 ER ++ + +KD +SR+ + WG +IP DPQ Sbjct: 386 ERFEKIYTNWLENIKDWCISRQLW-WGHRIPAWYCDDCGHITVSRKDPQKCEACGSPHIH 444 Query: 227 ----IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLL 280 ++ W + +T G+ P+G++ F+P D+ V G DI+ F W A ++ Sbjct: 445 QDEDVLDTWFSSALWPFSTMGW---PEGTEDLQYFYPTDVLVTGYDIIFF----WVARMI 497 Query: 281 SANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 +L K+V ++H +G K+SKSLGN IDP+EVIEE G D LR+ LV A Sbjct: 498 FMSLEFMKEVPFKHVLIHGLVRDAQGRKMSKSLGNGIDPLEVIEEYGADTLRFTLVIGNA 557 Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 G D + +D K ++ + AN + N SR V + L D D + T G T +D+ IL+ Sbjct: 558 PGNDMRFSQD--KVELSRNFANKLWN-ASRYVLLNLTDNDTNLYTDG-LTIADKWILTRY 613 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + +++E+ EN++ + A ++ V SE D Y + KP L N + V Sbjct: 614 NNIVKEVTENLEKFELGIAATKLYDFVWSEFCDWYIELSKP-VLYSDNLEAKKVTKSVLR 672 Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477 V+ LL F+P + +I+ L Sbjct: 673 YVLDNTLRLLHPFMPFITEEIWQNL 697 >gi|292669954|ref|ZP_06603380.1| valine-tRNA ligase [Selenomonas noxia ATCC 43541] gi|292648425|gb|EFF66397.1| valine-tRNA ligase [Selenomonas noxia ATCC 43541] Length = 904 Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 86/271 (31%), Positives = 127/271 (46%), Gaps = 27/271 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + T G+ P+ +K F+P V G DI+ +W A ++ L Sbjct: 470 VLDTWFSSALWPFETLGW---PEETKDLRHFYPTSTLVTGYDII----FFWVARMVMMGL 522 Query: 285 PLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 + VF HG + +G K+SKSLGN IDP+EVIE+ G D LR+ L+ G D Sbjct: 523 RFGGDVPFRDVFIHGLVRDSEGRKMSKSLGNGIDPVEVIEKYGADTLRFMLITGNTPGND 582 Query: 339 -GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVC 394 FY +RV A + AN I N SR + M L+ D +P T +D ILS Sbjct: 583 MRFY-----WERVEAARNFANKIWN-ASRYMLMNLEGTDDSFVPEESDCTLADRWILSRA 636 Query: 395 SRVLQEIRENMQNQLIHRALAQVIS-LVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTV 452 ++ ++ N++N + A + L SE D Y + K K NP +T LYV Sbjct: 637 AQTAHDVTANLENYELGEAGRMIYEFLWSEFCDWYIELTKARLYDKENPRARNTALYVLR 696 Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V+ + LL F+P L +I+ L A E+ Sbjct: 697 TVLERTMRLLHPFMPFLTEEIWQKLPHAGES 727 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN Q H+GHA + + D+L R+ R+ G +V++ G D +AG+ Sbjct: 61 SVVIPPPNVTGQLHMGHALDNTLQDILVRYQRMRGKNVVWIPGCD-----------HAGI 109 Query: 68 TTKVFVDQNSR 78 T+ V+++ R Sbjct: 110 ATQAKVEESLR 120 >gi|312793668|ref|YP_004026591.1| valyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180808|gb|ADQ40978.1| valyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 874 Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 79/254 (31%), Positives = 121/254 (47%), Gaps = 19/254 (7%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL----- 284 W + +T G+ + + K F+P D+ V DI+ F W A ++ + L Sbjct: 448 TWFSSALWPFSTLGWPEETEDLKY-FYPTDVLVTAYDIIFF----WVARMIFSGLEHMGK 502 Query: 285 -PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 P K V HG + +G K+SKSLGN IDP+EVIE+ G DALR+ LV I+ G D + Sbjct: 503 EPF-KYVLIHGIVRDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFH 561 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402 + K N + AN I N +R V M L P FT ++ ILS +++E+ Sbjct: 562 ME--KVEANRNFANKIWN-AARFVLMNLDIDTSFKPDESKFTFTERWILSRLDTLIREVT 618 Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460 EN++ I A ++ + + D Y + KP L V YV + V+ + Sbjct: 619 ENLEKFEIGIAAQKLYDFIWDEFCDWYIEMSKP-TLYNKEASNNKEVQYVLLTVLTDILK 677 Query: 461 LLQAFVPKLANKIF 474 LL F+P + +I+ Sbjct: 678 LLHPFMPFVTEEIY 691 >gi|326481166|gb|EGE05176.1| methionyl-tRNA synthetase [Trichophyton equinum CBS 127.97] Length = 617 Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 116/515 (22%), Positives = 215/515 (41%), Gaps = 54/515 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ + N PH+G+ +++ D AR+ R G++ L+ GTDE+G A Sbjct: 17 QRNILITSALPFVNNVPHLGNIIGCVLSGDAFARYCRGRGINTLYVGGTDEYGTTTEAKA 76 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T + D+ ++ + +IS+D F RTT + + + ++ K+ G + + Sbjct: 77 LAEKCTPQELCDKYHAIHAEIYEWFNISFDIFGRTTTQLQTEITQDIFLKLQKNGFLEER 136 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-------------QYYNAQ-----HNP 156 + Y ++ D V Y A G Q N + P Sbjct: 137 MTTQLYCEEHHSFLADRFVEGECPGCGYADARGDQCDLCGQLLESLQLRNPRCKIDGSTP 196 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKT 213 V + + F L Q K+ ++ H N + S++K GLK S++R Sbjct: 197 VT-RDTKHIFLELDKLQAKVEDFF--HDSAANGSWSNNGAVITGSWLKEGLKPRSITRD- 252 Query: 214 FDWGIKIPDDPQY---IMYVWIDALTNYLTTTG-YLDNPDGSKAKFW--PADLHV---IG 264 WG ++P P Y ++Y W DA Y++ T Y D + ++W P D+ + IG Sbjct: 253 ISWGTRVPL-PGYEDKVIYSWFDACIGYVSITARYTDQWE----RWWRNPKDVQLYQFIG 307 Query: 265 KDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321 KD + FH++ +PA + + + + ++ ++G K SKS G V + Sbjct: 308 KDNVVFHSVIFPASQIGTEDTWTRLHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQKTGIP 367 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTP 380 D R FL+ D + D N L +GN VSR + + + Y+ ++P Sbjct: 368 ADIWRCFLLSHRPETGDSEFTWDAFVNCNNNLLLKNLGNFVSRVLKFVNSRHYNNIMPNW 427 Query: 381 GAFTESDESIL-SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKK 438 + ES S +R+L + + I A + V+ + + + + + L + Sbjct: 428 TQYHESSFSTFKEEINRLLAQYIRELDAVKIRSAWSTVLQISQQGNGFLQLNRLDNSLAE 487 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 P + + V+ + + LA L+ ++P AN I Sbjct: 488 NEPAKCAAVIGIATNTVHLLASLVAPYMPDTANSI 522 >gi|154503249|ref|ZP_02040309.1| hypothetical protein RUMGNA_01073 [Ruminococcus gnavus ATCC 29149] gi|153796243|gb|EDN78663.1| hypothetical protein RUMGNA_01073 [Ruminococcus gnavus ATCC 29149] Length = 882 Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 88/328 (26%), Positives = 151/328 (46%), Gaps = 42/328 (12%) Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQYIMYV------ 230 ER N++ +KD +SR+ + WG +IP + P+ + Sbjct: 386 ERFNKIYLHWLENIKDWCISRQIW-WGHRIPAYYCDECGDFVVAREMPETCPHCGCTHFT 444 Query: 231 --------WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLL 280 W + +T G+ D + F+P D+ V G DI+ F I + + Sbjct: 445 QDEDTLDTWFSSALWPFSTLGWPDKTEDLDY-FYPTDVLVTGYDIIFFWVIRMVFSGYEH 503 Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 + P V HG + +G K+SKSLGN IDP+EVI++ G DALR LV A G D Sbjct: 504 TGKSPF-HTVLIHGLVRDSQGRKMSKSLGNGIDPLEVIDQYGCDALRLTLVTGNAPGNDM 562 Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399 + + ++ N AN + N SR + M +++ P E+D+ ILS +R+ + Sbjct: 563 RFYHERVESSRN--FANKVWN-ASRFIMMNMEENVVAEPDASLLNEADKWILSRVNRLAK 619 Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVI 455 ++ ENM + A+ +V + + D Y + K + + ++A+ VL+V V+ Sbjct: 620 DVTENMDKFELGIAVQKVYDFIWDEFCDWYVETAK-YRIYHKEEEKAAADCVLWVLKTVL 678 Query: 456 RQLAILLQAFVPKLANKIFDILFVADEN 483 +Q LL F+P + +I+ +L +E+ Sbjct: 679 KQALKLLHPFMPFITEEIYSVLVPEEES 706 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 +R + +T + PN + H+GHA + + D+L R+ R+ G + L+ GTD Sbjct: 33 DRSRKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMQGYNALWIPGTD 84 >gi|322800514|gb|EFZ21518.1| hypothetical protein SINV_15365 [Solenopsis invicta] Length = 1016 Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 126/569 (22%), Positives = 224/569 (39%), Gaps = 109/569 (19%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K + I++A+ Y N PH+G+ II VL+ +F +GTDE+G Sbjct: 260 KGERNILITSALPYVNNVPHLGN----IIGCVLSA--------DIFASGTDEYGTATEAK 307 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A T + D+ D+ I +D F RTT + + + KI +G + Sbjct: 308 ALQEKTTPQAICDKFFDIHNDVYRWFGIGFDYFGRTTTPEQTEIVQAFFLKIKSQGYVLT 367 Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME------------ 161 + + + D V Y+ A G + + V +E Sbjct: 368 ETVEQLHCEFCDRFLADRFVEGTCPGCKYEDARGDQCDGCGHLVNAVELINPRCKICNTR 427 Query: 162 -----EEGYFFRLSAYQDKLLSY----YESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212 +F L ++KL Y Y+ + + ++++ GLK ++R Sbjct: 428 PVVKNSVQFFLDLPKLEEKLKEYSATVYKGWSNVAKVVSK-----TWLRDGLKPRCITRD 482 Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV-----I 263 WGI +P + + YVW DA Y++ T K+W P D V + Sbjct: 483 -LKWGIPVPVEGFENKVFYVWFDAPFGYISITKRYTK---EYKKWWQPPQDTKVDLCQFM 538 Query: 264 GKDILRFHAIYWPAFLLSAN--LPLPKKVFSHG---------------------FILH-- 298 KD + FHAI +PA LL+ N L + + + G F+ H Sbjct: 539 AKDNVPFHAIMFPACLLAVNQNYTLTRNILATGTISKECKSLGCIYFMTVFVSYFLCHLF 598 Query: 299 ---------KGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKK 348 + +K SKS G + + + + D R++L +D ++ L Sbjct: 599 RNISEYLNYEDKKFSKSRGIGVFGTDARDTGIPADVWRFYLAYIRPETQDSTFNWVDLAT 658 Query: 349 RVNADLANGIGNLV-----------SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397 + N++L N +GN V SR++ K +D +P P E+D ++L++ R Sbjct: 659 KNNSELLNNLGNFVNRFVVSQKLVMSRALVFCEKFFDSNVP-PLEAEEADWTVLALAQRE 717 Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEV 454 L M+ + L ++++ ++Y Q+PW K N D +A TV+ + + Sbjct: 718 LSSYINAMEQAKLRDGLRHILAISKHGNQYMQFQQPWVKIKGNDDDKKKAGTVVAICCNL 777 Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN 483 L+ LL F+P +A ++ L ++++N Sbjct: 778 ACLLSALLAPFMPNVAKQLRSQLGLSNKN 806 >gi|169831629|ref|YP_001717611.1| valyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] gi|169638473|gb|ACA59979.1| valyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] Length = 881 Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 24/269 (8%) Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIYWP 276 I DP ++ W + +T G+ G A +F+P + V G+DI+ +W Sbjct: 444 IEQDPD-VLDTWFSSALWPFSTLGW----PGKTADLDRFYPTSVLVTGRDII----FFWV 494 Query: 277 AFLLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 A ++ + L + VF HG +L G K+SKSLGN +DPIEVIE+ G D+LR+ LV Sbjct: 495 ARMIFSGLKFMDREPFAEVFIHGLVLDALGRKMSKSLGNGVDPIEVIEKYGADSLRFMLV 554 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 G D + + L+ N AN + N SR V + L DY PG +D I Sbjct: 555 TGNTPGNDLRFHFEKLESSRN--FANKLWN-ASRFVLLNLGDYRPDKAAPGTLELADRWI 611 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL 448 LS L ++ + A + + + D Y + KP + T+ +RA Sbjct: 612 LSRFGAALARTTAGLEAYELGEAARALYEFIWDEFCDWYIELVKPRLYQGTDEERA-VAQ 670 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477 YV V V+R LL F+P + +++ L Sbjct: 671 YVLVRVLRSTLELLHPFMPFITEELWQHL 699 Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 S + PN + H+GHA + DVL R+ R+ G + L+ GTD G IA A+ G Sbjct: 41 SIVMPPPNVTGELHMGHALNNTLQDVLTRWRRMQGFETLWLPGTDHAG--IATQARVEG 97 >gi|104780203|ref|YP_606701.1| methionine--tRNA ligase [Pseudomonas entomophila L48] gi|95109190|emb|CAK13887.1| putative Methionine--tRNA ligase [Pseudomonas entomophila L48] Length = 662 Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 112/502 (22%), Positives = 196/502 (39%), Gaps = 44/502 (8%) Query: 16 PNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74 PN H+GH + I DVL R G V + +G D++ + A G + D Sbjct: 122 PNGDLHLGHLSGPYIAGDVLKRVLAGAGAQVFYGSGRDDNQTYVVTCAAREGFSPSECAD 181 Query: 75 QNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKG----CYSGWYS 129 + R+ I D FI + + D +++ D+G IY + Sbjct: 182 HYAEAIRETWQGYGIDMDFFITPDNQGEYADFVHHYLQRLYDQGLIYAKDTPVFVDNQGN 241 Query: 130 LRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWME-----------------EEGYFFRLS 170 EA+ + + G +DG A P Q ++ E FFRLS Sbjct: 242 ALHEAFIHGGCPHCGESSDGNACEACGQPNQCVDLTQPRVKQDGRQPQLKIETRLFFRLS 301 Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK--IPDDPQYIM 228 A D+L SY ++ +P + + GL D+ +S ++ DWGI+ +P ++ Sbjct: 302 ALADELASYVQT---ANMPAHVYQLCHTMLSQGLPDICISHRS-DWGIRHRLPGMQDQVV 357 Query: 229 YVWIDALTNYLTTTGYLDNPDGSK----AKFWPADL---HVIGKDILRFHAIYWPAFLLS 281 YVW + YL L +G + A+ + + H G D +H + +PA L+ Sbjct: 358 YVWFEMAFGYLWAASELPGAEGDRVARAAQRYAGAMDIVHCYGFDNAYYHTLLFPAVYLA 417 Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341 L P+ + + G K S S ++I + + E G D R L+ G + Sbjct: 418 LGLTPPRHHVVNELLDLNGSKFSTSRRHLIWGKDFLTEAGADYARMALMLTRPEGVRTNF 477 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 D + +R+N A+ + + V R + + G +P GA+ + + + Sbjct: 478 TVDQVCERINDLFADKLTHWVQRLQQHVARQ-GGQVPESGAWLSDQKIYHGELMQWMAGY 536 Query: 402 RENMQNQLI--HRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQ 457 R+ Q R QV ++ R+ AQ+ L P + A T + + R Sbjct: 537 RQAAATQTFSPRRMAEQVAQVIDRAWRFGLAQEHL-LAPGQPLSNHARTAVALLALTARW 595 Query: 458 LAILLQAFVPKLANKIFDILFV 479 LA +P L+ ++ ++L + Sbjct: 596 LAHATTPLMPGLSRQLNEVLNI 617 >gi|296813921|ref|XP_002847298.1| methionyl-tRNA synthetase [Arthroderma otae CBS 113480] gi|238842554|gb|EEQ32216.1| methionyl-tRNA synthetase [Arthroderma otae CBS 113480] Length = 615 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 109/512 (21%), Positives = 214/512 (41%), Gaps = 48/512 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ + N PH+G+ +++ D AR+ R G++ L+ GTDE+G A Sbjct: 17 KRNILITSALPFVNNVPHLGNIIGCVLSGDAFARYCRGRGINTLYVGGTDEYGTTTEAKA 76 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T + D+ ++ +IS+D F RTT + D + ++ K+ G + + Sbjct: 77 LVDKCTPQELCDKYHAIHAEIYKWFNISFDIFGRTTTQLQTDITQDIFLKLKQNGFLTER 136 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME------------- 161 + Y ++ D V Y A G + ++ ++ Sbjct: 137 MTTQLYCQEHHSFLADRFVEGECPVCGYTDARGDQCDLCGQLLESLQLKYPRCKIDGSKP 196 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDW 216 + F L Q + S++ + + S ++K GLK S++R +W Sbjct: 197 ITKDTKHIFLELDKLQPNIESFFRDSAAAGVWSNNGTVITSAWLKEGLKPRSITRD-INW 255 Query: 217 GIKIPDDPQY---IMYVWIDALTNYLTTTG-YLDNPDGSKAKFW--PADLHV---IGKDI 267 G ++P P Y ++Y W DA Y++ T Y D + K+W P D+ + IGKD Sbjct: 256 GTRVPL-PGYEEKVIYSWFDACIGYVSITAQYTDQWE----KWWRNPEDVQLYQFIGKDN 310 Query: 268 LRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324 + FH++ +P + K + + ++ ++G K SKS G V + D Sbjct: 311 VVFHSVIFPGSQIGTGDTWTKLHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQKTGIPADI 370 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAF 383 R FL+ D + D N L GN V+R + + + Y+ ++P + Sbjct: 371 WRCFLLSHRPEAGDSEFTWDAFINCNNNLLLKNFGNFVNRVLKFVNSRHYNNIVPNWAEY 430 Query: 384 TE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNP 441 E S ++ +++L + + + I A + V+ + + + + K L + P Sbjct: 431 REDSFDTFKKEINKLLSQYIQELDTVKIRSAWSIVLQISQQGNGFLQLNKLDNNLAENEP 490 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 R + V+ + + ++ LA ++ ++P A I Sbjct: 491 FRCAAVIGIAINMVHLLASIIAPYMPDTAKSI 522 >gi|312127460|ref|YP_003992334.1| valyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] gi|311777479|gb|ADQ06965.1| valyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] Length = 874 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 79/254 (31%), Positives = 121/254 (47%), Gaps = 19/254 (7%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL----- 284 W + +T G+ + + K F+P D+ V DI+ F W A ++ + L Sbjct: 448 TWFSSALWPFSTLGWPEETEDLKY-FYPTDVLVTAYDIIFF----WVARMIFSGLEHMGK 502 Query: 285 -PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 P K V HG + +G K+SKSLGN IDP+EVIE+ G DALR+ LV I+ G D + Sbjct: 503 EPF-KYVLIHGIVRDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFH 561 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402 + K N + AN I N +R V M L P FT ++ ILS +++E+ Sbjct: 562 ME--KVEANRNFANKIWN-AARFVLMNLDIDTSFKPDASKFTFTERWILSRLDTLVREVT 618 Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460 EN++ I A ++ + + D Y + KP L V YV + V+ + Sbjct: 619 ENLEKFEIGIAAQKLYDFIWDEFCDWYIEMSKP-TLYNKEASNNKEVQYVLLTVLTDVLK 677 Query: 461 LLQAFVPKLANKIF 474 LL F+P + +I+ Sbjct: 678 LLHPFMPFVTEEIY 691 >gi|222529480|ref|YP_002573362.1| valyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] gi|222456327|gb|ACM60589.1| valyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] Length = 874 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 79/254 (31%), Positives = 121/254 (47%), Gaps = 19/254 (7%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL----- 284 W + +T G+ + + K F+P D+ V DI+ F W A ++ + L Sbjct: 448 TWFSSALWPFSTLGWPEETEDLKY-FYPTDVLVTAYDIIFF----WVARMIFSGLEHMGK 502 Query: 285 -PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 P K V HG + +G K+SKSLGN IDP+EVIE+ G DALR+ LV I+ G D + Sbjct: 503 EPF-KYVLIHGIVRDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFH 561 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402 + K N + AN I N +R V M L P FT ++ ILS ++ E+ Sbjct: 562 ME--KVEANRNFANKIWN-AARFVIMNLDIDTSFKPDESKFTFTERWILSRLDTLISEVT 618 Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460 EN++ I A ++ + + D Y + KP L + V YV + V+ + Sbjct: 619 ENLEKFEIGIAAQKLYDFIWDEFCDWYIEMSKPI-LYNKEAENNKEVQYVLLTVLTNVLK 677 Query: 461 LLQAFVPKLANKIF 474 LL F+P + +I+ Sbjct: 678 LLHPFMPFVTEEIY 691 >gi|302684777|ref|XP_003032069.1| hypothetical protein SCHCODRAFT_67821 [Schizophyllum commune H4-8] gi|300105762|gb|EFI97166.1| hypothetical protein SCHCODRAFT_67821 [Schizophyllum commune H4-8] Length = 700 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 122/533 (22%), Positives = 222/533 (41%), Gaps = 61/533 (11%) Query: 2 KEREK-LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 KE E+ + I++A+ Y N PH+G+ + ADV +R++R L+ GTDE+G Sbjct: 29 KEGERNILITSALPYCNNVPHLGNIIGSTLSADVFSRYNRTRNRRTLYVCGTDEYGTATE 88 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A G+T K D+ + ++ +D F RT+ H + ++ + G + Sbjct: 89 TQALKEGITPKELCDKYHALHVATYEWFNLGFDYFGRTSTPWHTTISQEIFTNLYKNGYL 148 Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWME------- 161 K Y + D V Y A G + +P+ ++ Sbjct: 149 EKQDKEQTYCEGCPKFLADRFVEGTCPHCGYDDARGDQCDGCSRTLDPIDLIKPRCLVDK 208 Query: 162 --------EEGYFFRLSAYQDKLLSYYES-------HPEFILPIERRNEVI-SFVKSGLK 205 + +L+A Q K + ++ P + I E+I +K+GL Sbjct: 209 THVVTRKISSHMYLKLNAIQPKTEEWIKATWKKGKWSPNAV--INSEGEIIDPRLKNGLV 266 Query: 206 DLSLSRKTFDWGIKIP--DDP-----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258 +++R WG+ +P D+ ++YVW DA Y + T P+ + F P Sbjct: 267 PTAITRD-LTWGVPVPVVDEALEGMKDKVLYVWFDAPIGYPSITANY-TPEWRQWWFNPE 324 Query: 259 DLHV---IGKDILRFHAIYWPAFLLS--ANLPLPKKVFSHGFILHKGEKISKSLG-NVID 312 +++ +GKD + FH +Y+P+ L N + + + F+ ++ K SKS V Sbjct: 325 HVNLYQFMGKDNVYFHTVYFPSVELGDGRNWTMLHHLSTTEFLNYENGKFSKSKNRGVFG 384 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 P V D RY+L+ D + N L N GN V+R++ + Sbjct: 385 PAAKETGVPSDVWRYYLLSTRPETGDAMFSWSEFIAANNNVLLNNFGNFVNRALKFVTSQ 444 Query: 373 YDGMIP----TPGAFTE---SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 YD ++P PG ++ +D ++ + +L E NM+ + L +++L + + Sbjct: 445 YDSIVPDGGDAPGPYSPNDVNDADFIADVNNLLAEYTANMEAVKLRAGLQTIMALAARGN 504 Query: 426 RYFDAQKPWE-LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y A K + L +P R + VL V +I L++L+ ++P +N + L Sbjct: 505 GYLQASKLGKALMIEDPTRCAQVLARAVNLIYVLSVLVYPYMPATSNAMLAQL 557 >gi|312622286|ref|YP_004023899.1| valyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] gi|312202753|gb|ADQ46080.1| valyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] Length = 874 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 79/254 (31%), Positives = 121/254 (47%), Gaps = 19/254 (7%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL----- 284 W + +T G+ + + K F+P D+ V DI+ F W A ++ + L Sbjct: 448 TWFSSALWPFSTLGWPEETEDLKY-FYPTDVLVTAYDIIFF----WVARMIFSGLEHMGK 502 Query: 285 -PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 P K V HG + +G K+SKSLGN IDP+EVIE+ G DALR+ LV I+ G D + Sbjct: 503 EPF-KYVLIHGIVRDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFH 561 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402 + K N + AN I N +R V M L P FT ++ ILS ++ E+ Sbjct: 562 ME--KVEANRNFANKIWN-AARFVIMNLDIDTSFKPDESKFTFTERWILSRLDTLISEVT 618 Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460 EN++ I A ++ + + D Y + KP L + V YV + V+ + Sbjct: 619 ENLEKFEIGIAAQKLYDFIWDEFCDWYIEMSKPI-LYNKEAENNKEVQYVLLTVLTNVLK 677 Query: 461 LLQAFVPKLANKIF 474 LL F+P + +I+ Sbjct: 678 LLHPFMPFVTEEIY 691 >gi|291542091|emb|CBL15201.1| valyl-tRNA synthetase [Ruminococcus bromii L2-63] Length = 897 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 98/367 (26%), Positives = 157/367 (42%), Gaps = 62/367 (16%) Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 H ++ M + +F +++ + +P ER +V +KD +SR+ Sbjct: 374 HTTIEPMVSKQWFVKMAPLAKPAIDVVRKGNTKFIP-ERFEKVYFHWMENIKDWCISRQL 432 Query: 214 FDWGIKIP--------------DDPQYI--------------MYVWIDALTNYLTTTGYL 245 + WG +IP D P+ + W + +T G+ Sbjct: 433 W-WGHRIPAWYCEECGEVMVAKDAPEKCCKCGSTHIHQDEDTLDTWFSSALWPFSTLGWP 491 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFIL-H 298 D + F+P V G DI+ F W A ++ + P K VF HG + Sbjct: 492 DKTPELEY-FYPTSTLVTGYDIIFF----WVARMIFSACENMGSAPF-KTVFMHGIVRDE 545 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN--ADLAN 356 G K+SKSLGN IDP+EVI++ G DALR+FL G D Y KRV A+ AN Sbjct: 546 NGIKMSKSLGNGIDPLEVIDKYGADALRFFLATGNTPGNDMRYS----DKRVEACANFAN 601 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 + N SR V M + D+D P T D+ I+S + V +E+ EN++ + A+ + Sbjct: 602 KLWN-ASRYVHMNIDDHDVKNELPKTLTTEDKWIVSTLNTVAKEVNENLEKFELGIAVQK 660 Query: 417 VISLVSEVDRYFDAQKPW--ELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 + + +D W EL KT + + A V + V+ Q+ LL F+P + Sbjct: 661 IYEFI------WDCYCDWYIELVKTRLSSDGEDAQNARQVLLYVLDQILRLLHPFMPYIT 714 Query: 471 NKIFDIL 477 +I+ + Sbjct: 715 EEIWQTI 721 Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 25/189 (13%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTT 69 PN Q H+GHA + + D+L R+ R+ G L+ GTD KI +A + G+T Sbjct: 46 PNITGQLHMGHALDETLQDILIRWRRMQGYSALWLPGTDHASIATEAKIVEAMRKEGITK 105 Query: 70 KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129 + D F A Y I + K+ +C W++ ++ + +GC Sbjct: 106 E---DIGREEFLKRAWEWKKVYGGRITSQLKKLGSSCD--WER--ERFTMDEGCSKAVKE 158 Query: 130 LRDEAYYNDDEVYKG------ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY--- 180 + YND ++Y+G + V++ E+ G+F+ L YQ K Y Sbjct: 159 VFVR-LYNDGKIYRGNRMVNWCPHCCTSISDAEVEYKEQNGHFWHL-LYQVKETGEYLEI 216 Query: 181 -ESHPEFIL 188 + PE +L Sbjct: 217 ATTRPETML 225 >gi|326470325|gb|EGD94334.1| methionyl-tRNA synthetase [Trichophyton tonsurans CBS 112818] Length = 617 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 116/514 (22%), Positives = 214/514 (41%), Gaps = 52/514 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ + N PH+G+ +++ D AR+ R G++ L+ GTDE+G A Sbjct: 17 QRNILITSALPFVNNVPHLGNIIGCVLSGDAFARYCRGRGINTLYVGGTDEYGTTTEAKA 76 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T + D+ ++ + +IS+D F RTT + + + ++ K+ G + + Sbjct: 77 LAEKCTPQELCDKYHAIHAEIYEWFNISFDIFGRTTTQLQTEITQDIFLKLQKNGFLEER 136 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-------------QYYNAQ-----HNP 156 + Y ++ D V Y A G Q N + P Sbjct: 137 MTTQLYCEEHHSFLADRFVEGECPGCGYADARGDQCDLCGQLLESLQLRNPRCTIDGSTP 196 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI--SFVKSGLKDLSLSRKTF 214 V + + F L Q K+ ++ VI S++K GLK S++R Sbjct: 197 VT-RDTKHIFLELDKLQAKVEDFFHDSAAN-GSWSNSGAVITGSWLKEGLKPRSITRD-I 253 Query: 215 DWGIKIPDDPQY---IMYVWIDALTNYLTTTG-YLDNPDGSKAKFW--PADLHV---IGK 265 WG ++P P Y ++Y W DA Y++ T Y D + ++W P D+ + IGK Sbjct: 254 SWGTRVPL-PGYEDKVIYSWFDACIGYVSITARYTDQWE----RWWRNPKDVQLYQFIGK 308 Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322 D + FH++ +PA + + + + ++ ++G K SKS G V + Sbjct: 309 DNVVFHSVIFPASQIGTEDTWTRLHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQKTGIPA 368 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPG 381 D R FL+ D + D N L +GN VSR + + + Y+ ++P Sbjct: 369 DIWRCFLLSHRPETGDSEFTWDAFVNCNNNLLLKNLGNFVSRVLKFVNSRHYNNIMPNWT 428 Query: 382 AFTESDESIL-SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKT 439 + ES S +R+L + + I A + V+ + + + + + L + Sbjct: 429 QYHESSFSTFKEEINRLLAQYIRELDAVKIRSAWSTVLQISQQGNGFLQLNRLDNSLAEN 488 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 P + + V+ + + LA L+ ++P AN I Sbjct: 489 EPSKCAAVIGIATNTVHLLASLVAPYMPDTANSI 522 >gi|302871712|ref|YP_003840348.1| valyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] gi|302574571|gb|ADL42362.1| valyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] Length = 874 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 79/254 (31%), Positives = 120/254 (47%), Gaps = 19/254 (7%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL----- 284 W + +T G+ + + K F+P D+ V DI+ F W A ++ + L Sbjct: 448 TWFSSALWPFSTLGWPEETEDLKY-FYPTDVLVTAYDIIFF----WVARMIFSALEHMGK 502 Query: 285 -PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 P K V HG + +G K+SKSLGN IDP+EVIE+ G DALR+ LV I+ G D + Sbjct: 503 EPF-KYVLIHGIVRDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFH 561 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402 + K N + AN I N +R V M L P FT ++ ILS ++ E+ Sbjct: 562 ME--KVEANRNFANKIWN-AARFVLMNLDIDTSFKPDESKFTFTERWILSRLDTLISEVT 618 Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460 EN++ I A ++ + + D Y + KP L V YV + V+ + Sbjct: 619 ENLEKFEIGIAAQKLYDFIWDEFCDWYIEMSKP-TLYNKEASNNKEVQYVLLTVLTDILK 677 Query: 461 LLQAFVPKLANKIF 474 LL F+P + +I+ Sbjct: 678 LLHPFMPFVTEEIY 691 >gi|258645848|ref|ZP_05733317.1| valine--tRNA ligase [Dialister invisus DSM 15470] gi|260403221|gb|EEW96768.1| valine--tRNA ligase [Dialister invisus DSM 15470] Length = 883 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 87/290 (30%), Positives = 136/290 (46%), Gaps = 28/290 (9%) Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPA 277 I DP ++ W + +T G+ PD + +++P V G DI+ F W A Sbjct: 444 IRQDPD-VLDTWFSSALWPFSTMGW---PDRTPVLNQWYPTSTMVTGYDIIFF----WVA 495 Query: 278 FLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 ++ ++ K+ VF HG + +G K+SKSLGN IDP+EVIE+ G DALR+ LV Sbjct: 496 RMMFMSMEFMKEIPFRYVFIHGLVRDSQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVT 555 Query: 332 EIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDES 389 G D FY + + N + AN + N S+ M L DYD IP +T +D+ Sbjct: 556 GNTPGNDMRFYYE---RVEGNRNFANKLWN-ASKFTLMNLDDYDPRFIPEESQYTLADKW 611 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTV 447 IL ++ + + EN+ + A + S D Y + K N DR T Sbjct: 612 ILEGLAQTEEHVSENLDKYELGAAADSIYDFAWNSFCDWYIETAKGRLYGAHNADRQVT- 670 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC---FQSLDQRLK 494 YV V V+ ++ LL F+P + ++ L + E + + D+RL+ Sbjct: 671 QYVLVYVLTRIMALLHPFMPFITEHLWQHLHHSGETLARAPWPAADERLR 720 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 13/69 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S + PN Q H+GHA + + D+L R+ R+ G +VL+ G D +AG+ Sbjct: 41 SIVLPPPNVTGQLHMGHALDNTLQDILIRYKRMQGYNVLWLPGKD-----------HAGI 89 Query: 68 TTKVFVDQN 76 T+V V++ Sbjct: 90 ATQVKVEKQ 98 >gi|257440904|ref|ZP_05616659.1| valine--tRNA ligase [Faecalibacterium prausnitzii A2-165] gi|257196684|gb|EEU94968.1| valine--tRNA ligase [Faecalibacterium prausnitzii A2-165] Length = 901 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 94/398 (23%), Positives = 171/398 (42%), Gaps = 52/398 (13%) Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189 L++ + + E K G Y H+ ++ M + +F ++ + E +P Sbjct: 350 LKEGGFLKEIEPLKHEVGTCYRC-HSTIEPMVSKQWFVKMEPLAKPAIESVEKGEIKFVP 408 Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------- 221 ++++K G +D +SR+ + WG +IP Sbjct: 409 ERFTKNYLNWMK-GTRDWCISRQLW-WGHQIPAFYCNDCGETVVAKEMPCTCPKCGGSHF 466 Query: 222 -DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280 DP + W + +T G+ + F+P + V G DI+ F W + ++ Sbjct: 467 TQDPD-TLDTWFSSALWPFSTLGWPNEDSADLKYFYPTNTLVTGYDIIGF----WVSRMI 521 Query: 281 SANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 + L K V HG + +G K+SKSLGN IDP+EVI + G DALR+ L+ Sbjct: 522 FSGLAYTGKAPFDTVCIHGIVRDSQGRKMSKSLGNGIDPLEVIAQYGADALRFMLLDGST 581 Query: 335 CGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 G D Y +K+V A + AN + N + + +D+ +P SD+ +L+ Sbjct: 582 PGNDMRYS----EKKVEAARNFANKLWNATRFVLMNLPEDFQPGLPEESKLDMSDKWVLT 637 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYV 450 ++V + +N+ + + A A++ S + +V D + + KP L + ++A T V Sbjct: 638 KLNQVAGAMTDNLDHFEMGLAAAKINSFIWDVYCDWFIEIAKP-RLNSGDAEQADTARRV 696 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488 V V+ + LL F+P + +++ L + E QS Sbjct: 697 LVYVLDKALKLLHPFMPFITEELYQALPGSAETIMTQS 734 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 29/185 (15%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTT 69 PN Q H+GHA + + DVL R R+ G L+ GTD K+ +A + G+T Sbjct: 45 PNVTGQLHMGHALDNTMQDVLIRTKRMQGYAALWVPGTDHASIATEAKVVEAMRAEGLTK 104 Query: 70 KV----------------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113 ++ + ++ + + D + F T ++ D + ++ ++ Sbjct: 105 EMVGRDGFLERAWDWKTKYGNRIVSQLKKLGTSCDWQRERF--TMDEGCSDAVKEVFVRL 162 Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 DKG IY+G + +D EV Y+ DG +++ + PV+ E G L+ Sbjct: 163 YDKGLIYRGNRMVNWCPHCNTSISDAEVEYEEKDGNFWHLLY-PVK---ETGEMLELATT 218 Query: 173 QDKLL 177 + + + Sbjct: 219 RPETM 223 >gi|303229381|ref|ZP_07316171.1| valine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] gi|302515917|gb|EFL57869.1| valine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] Length = 885 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 81/265 (30%), Positives = 122/265 (46%), Gaps = 14/265 (5%) Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF 278 + DP ++ W + T G+ D ++ K W P + V G DI+ F Sbjct: 445 VTQDPD-VLDTWFSSGLWPFATMGW--PKDTAELKQWYPTSVLVTGYDIIFFWVARMIFM 501 Query: 279 LLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 L +P K VF HG + +G K+SKSLGN I+P++VI E G DALR+ LV G Sbjct: 502 ALEFEHEIPFKHVFIHGLVRDSQGRKMSKSLGNGINPLDVIGEYGADALRFTLVTGNTPG 561 Query: 337 KD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVC 394 D FY + + N + AN I N S+ V M L +YD +PT T +D+ I+ Sbjct: 562 NDMRFYME---RVEANRNFANKIWN-ASKFVLMNLTNYDESFVPTEADLTLADKWIVEKY 617 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + + I N+ + A + V + + D Y + KP N TV Y+ V Sbjct: 618 NETVASITANLDKFELGEAASSVYDFIWNTYCDWYIELAKPRLYSDANERDRRTVQYLLV 677 Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477 ++R + LL F+P + I+ L Sbjct: 678 TILRHMLELLHPFMPFVTEHIWQHL 702 Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 23/123 (18%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKA----------- 61 H+GHA + + D+L RF R+ G +VL+ GTD G + +AK Sbjct: 54 HMGHALDNTLQDILIRFKRMQGYNVLWMPGTDHAGIATQIKVEEMLAKEEGKSRYDLGRE 113 Query: 62 --AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 + K + D + R + D S + F T ++ ++ R ++ + +KG I Sbjct: 114 KFVERVWKWKKEYGDTIVKQIRSLGASCDWSRERF--TLDEGYYHAVREVFVSLYEKGLI 171 Query: 120 YKG 122 Y+G Sbjct: 172 YRG 174 >gi|303231399|ref|ZP_07318133.1| valine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] gi|302513995|gb|EFL56003.1| valine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] Length = 885 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 81/265 (30%), Positives = 122/265 (46%), Gaps = 14/265 (5%) Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF 278 + DP ++ W + T G+ D ++ K W P + V G DI+ F Sbjct: 445 VTQDPD-VLDTWFSSGLWPFATMGW--PKDTAELKQWYPTSVLVTGYDIIFFWVARMIFM 501 Query: 279 LLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 L +P K VF HG + +G K+SKSLGN I+P++VI E G DALR+ LV G Sbjct: 502 ALEFEHEIPFKHVFIHGLVRDSQGRKMSKSLGNGINPLDVIGEYGADALRFTLVTGNTPG 561 Query: 337 KD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVC 394 D FY + + N + AN I N S+ V M L +YD +PT T +D+ I+ Sbjct: 562 NDMRFYME---RVEANRNFANKIWN-ASKFVLMNLTNYDESFVPTEADLTLADKWIVEKY 617 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + + I N+ + A + V + + D Y + KP N TV Y+ V Sbjct: 618 NETVASITANLDKFELGEAASSVYDFIWNTYCDWYIELAKPRLYSDANERDRRTVQYLLV 677 Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477 ++R + LL F+P + I+ L Sbjct: 678 TILRHMLELLHPFMPFVTEHIWQHL 702 Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 11/55 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75 H+GHA + + D+L RF R+ G +VL+ GTD +AG+ T++ V++ Sbjct: 54 HMGHALDNTLQDILIRFKRMQGYNVLWMPGTD-----------HAGIATQIKVEE 97 >gi|313115499|ref|ZP_07800964.1| valyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] gi|310622209|gb|EFQ05699.1| valyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] Length = 922 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 77/280 (27%), Positives = 134/280 (47%), Gaps = 20/280 (7%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 K+ DP + W + +T G+ + F+P + V G DI+ F W + Sbjct: 486 KLTQDPD-TLDTWFSSALWPFSTLGWPNEESEDLKYFYPTNTLVTGYDIIGF----WVSR 540 Query: 279 LLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++ + L K V HG + +G K+SKSLGN IDP+EVI + G DALR+ LV Sbjct: 541 MIFSGLAYTGKAPFSTVCIHGIVRDSQGRKMSKSLGNGIDPLEVIAQYGADALRFMLVDG 600 Query: 333 IACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 G D Y ++K+V A + AN + N + + +D+ +P+ SD+ + Sbjct: 601 STPGNDMRY----IEKKVEAARNFANKLWNATRFVLMNLPEDFTPGLPSEDKLDMSDKWV 656 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVL 448 L+ ++V + +N+ + + A A++ S + +V D + + KP L + ++A T Sbjct: 657 LTKLNQVAGAMTDNLDHYEMGLAAAKINSFIWDVYCDWFIEIAKP-RLNSGDAEQADTAR 715 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488 V V V+ + LL F+P + +++ L + E QS Sbjct: 716 RVLVYVLDKALKLLHPFMPFITEELYQALPGSAETIMTQS 755 Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust. Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 31/186 (16%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTT 69 PN Q H+GHA + + D+L R R+ G L+ GTD K+ +A + G+T Sbjct: 66 PNVTGQLHMGHAVDNTMQDILIRTKRMQGYAALWVPGTDHASIATEAKVVEAMRAEGLTK 125 Query: 70 KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC-----------------RILWKK 112 ++ F D A Y + I + K+ +C + ++ + Sbjct: 126 EMV---GRDGFLDRAWAWKTKYGNRIVSQLKKLGSSCDWDRERFTMDEGCSEAVKEVFVR 182 Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171 + DKG IY+G + +D EV Y+ DG +++ + PV+ E G L+ Sbjct: 183 LYDKGLIYRGNRMVNWCPHCNTSISDAEVEYEEKDGSFWHLLY-PVK---ETGEMLELAT 238 Query: 172 YQDKLL 177 + + + Sbjct: 239 TRPETM 244 >gi|312875830|ref|ZP_07735820.1| valyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] gi|311797311|gb|EFR13650.1| valyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] Length = 882 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 28/279 (10%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL----- 284 W + +T G+ + + K F+P D+ V DI+ F W A ++ + L Sbjct: 448 TWFSSALWPFSTLGWPEETEDLKY-FYPTDVLVTAYDIIFF----WVARMIFSGLEHMGK 502 Query: 285 -PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 P K V HG + +G K+SKSLGN IDP+EVIE+ G DALR+ LV I+ G D + Sbjct: 503 EPF-KYVLIHGIVRDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFH 561 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402 + K N + AN I N +R + M L P FT ++ ILS +++E+ Sbjct: 562 ME--KVEANRNFANKIWN-AARFMLMNLDIDTSFKPDESKFTFTERWILSRLDTLIREVT 618 Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460 EN++ I A ++ + + D Y + KP L + V YV + V+ + Sbjct: 619 ENLEKFEIGIAAQKLYDFIWDEFCDWYIEMSKPI-LYNKEAENNKEVQYVLLTVLTNVLK 677 Query: 461 LLQAFVPKLANKIF-------DILFVAD--ENRCFQSLD 490 LL F+P + +I+ + L ++ E +C+ S D Sbjct: 678 LLHPFMPFVTEEIYLNLPHDEESLVISKWPEAKCYYSAD 716 >gi|121534137|ref|ZP_01665962.1| valyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] gi|121307240|gb|EAX48157.1| valyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] Length = 884 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 83/279 (29%), Positives = 127/279 (45%), Gaps = 15/279 (5%) Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264 +D+S K G K+ DP ++ W + +T G+ + A F+P + V G Sbjct: 431 EDVSCCPKC---GGKVEQDPD-VLDTWFSSALWPFSTMGWPEK-TAELAHFYPTSVLVTG 485 Query: 265 KDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVG 321 DI+ F + + A +P + VF HG + +G K+SKSLGN IDP+EVIE+ G Sbjct: 486 YDIIFFWVARMVFMAMEFQREIPF-RYVFIHGLVRDAQGRKMSKSLGNGIDPLEVIEKYG 544 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTP 380 D LR+ LV G D + + ++ N AN I N SR V M L +D P P Sbjct: 545 ADTLRFTLVTGNTPGNDMRFYWERVESSRN--FANKIWN-ASRFVLMNLDGFDAAAQPDP 601 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKK 438 F +D ILS ++ + ++ N++ + A + + D Y + K +K Sbjct: 602 ARFALADRWILSRYAQTVADVTANLEKFELGEAARLLYEFIWNEYCDWYIELTKGRLYRK 661 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 N T YV V+R LL F+P + I+ L Sbjct: 662 ENAQDRETAQYVLWYVLRGTLELLHPFMPFITEAIWQAL 700 Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 26/184 (14%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56 E +K S I PN Q H+GHA + + D+L RF R+ G + L+ GTD G Sbjct: 34 EPDKEPFSIVIPPPNVTGQLHMGHALDNTLQDILIRFKRMQGYNTLWMPGTDHAGIATQI 93 Query: 57 KIAKAAQNAGVT-----TKVFVDQ--------NSRNFRDMADVLDISYDDFIR---TTEK 100 K+ + G+T + F+D+ SR + + + + D++R T ++ Sbjct: 94 KVEEMLAKEGLTRYDLGREKFIDRVWEWKRQYGSRIIKQLKSLG--ASCDWVRERFTMDE 151 Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQW 159 R ++ + +KG IY+G + R + +D EV ++ G Y+ ++ PV+ Sbjct: 152 GCSRAVREVFVSLYEKGLIYQGNRITNWCPRCKTALSDIEVEHEEKSGHLYHVRY-PVEG 210 Query: 160 MEEE 163 M+ E Sbjct: 211 MDGE 214 >gi|295102463|emb|CBL00008.1| valyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6] Length = 901 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 133/282 (47%), Gaps = 20/282 (7%) Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276 G ++ DP + W + +T G+ + F+P + V G DI+ F W Sbjct: 463 GTRLTQDPD-TLDTWFSSALWPFSTLGWPNEESEDLKYFYPTNTLVTGYDIIGF----WV 517 Query: 277 AFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 + ++ + L K V HG + +G K+SKSLGN IDP+EVI + G DALR+ LV Sbjct: 518 SRMIFSGLAYTGKAPFDTVCIHGIVRDSQGRKMSKSLGNGIDPLEVIAQYGADALRFMLV 577 Query: 331 REIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 G D Y +K+V A + AN + N + + +D+ +P SD+ Sbjct: 578 DGSTPGNDMRYS----EKKVEAARNFANKLWNATRFVLMNLPEDFQPGLPGEEKLDMSDK 633 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRAST 446 +L+ ++V + +N+ + + A A++ S + +V D + + KP L + ++A T Sbjct: 634 WVLTKLNQVAGAMSDNLDHYEMGLAAAKINSFIWDVYCDWFIEIAKP-RLNSGDAEQADT 692 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488 V V V+ + LL F+P + +++ L + E QS Sbjct: 693 ARRVLVYVLDKALKLLHPFMPFITEELYQALPGSAETIMTQS 734 Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 31/186 (16%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTT 69 PN Q H+GHA + + D+L R R+ G L+ GTD K+ +A + G+T Sbjct: 45 PNVTGQLHMGHAVDNTMQDILIRTKRMQGYAALWVPGTDHASIATEAKVVEAMRAEGLTK 104 Query: 70 KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC-----------------RILWKK 112 ++ F + A Y + I + K+ +C + ++ + Sbjct: 105 EMV---GRDGFLERAWAWKTKYGNRIVSQLKKLGSSCDWERERFTMDEGCSEAVKEVFVR 161 Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171 + DKG IY+G + +D EV Y+ DG +++ + PV+ E G L+ Sbjct: 162 LYDKGLIYRGNRMVNWCPHCNTSISDAEVEYEEKDGSFWHLLY-PVK---ETGEMLELAT 217 Query: 172 YQDKLL 177 + + + Sbjct: 218 TRPETM 223 >gi|227871839|ref|ZP_03990240.1| conserved hypothetical protein [Oribacterium sinus F0268] gi|227842311|gb|EEJ52540.1| conserved hypothetical protein [Oribacterium sinus F0268] Length = 69 Score = 88.6 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 40/68 (58%), Positives = 52/68 (76%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E++ YI+TAIAY + +PHIG+ YE+I+AD +ARF R +G DV F TGTDEHGQKI A Sbjct: 2 EKKPYYITTAIAYASGKPHIGNTYEIILADAIARFKRYEGYDVFFMTGTDEHGQKIEGKA 61 Query: 63 QNAGVTTK 70 ++AG T K Sbjct: 62 KDAGKTPK 69 >gi|804996|emb|CAA89153.1| orf [Homo sapiens] Length = 478 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/290 (25%), Positives = 138/290 (47%), Gaps = 20/290 (6%) Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAK 254 S+++ GLK ++R WG +P + + YVW DA YL+ T Y D + + Sbjct: 62 SWLRDGLKPRCITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----R 116 Query: 255 FWPADLHV-----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSL 307 +W V + KD + FH++ +P L A N L + + ++ ++ K SKS Sbjct: 117 WWKNPEQVDLYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSR 176 Query: 308 G-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 G V + + D R++L+ G+D + L + N++L N +GN ++R+ Sbjct: 177 GVGVFGDMAQDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAG 236 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 + K + G +P T D+ +L + LQ + ++ I AL ++++ ++ Sbjct: 237 MFVSKFFGGYVPE-MVLTPDDQRLLGHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQ 295 Query: 427 YFDAQKPWE-LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 Y +PW+ +K + D RA TV + V + L+++LQ ++P ++ I Sbjct: 296 YIQVNEPWKRIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 345 >gi|289577959|ref|YP_003476586.1| valyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] gi|289527672|gb|ADD02024.1| valyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] Length = 879 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 94/323 (29%), Positives = 149/323 (46%), Gaps = 47/323 (14%) Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY---------- 226 ER ++ + +KD +SR+ + WG +IP DPQ Sbjct: 386 ERFEKIYTNWLENIKDWCISRQLW-WGHRIPAWYCDDCGHITVSRKDPQKCEACGSTNIH 444 Query: 227 ----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 ++ W + +T G+ + K F+P D+ V G DI+ F W A ++ Sbjct: 445 QDEDVLDTWFSSALWPFSTMGWPEETQDLKY-FYPTDVLVTGYDIIFF----WVARMIFM 499 Query: 283 NLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 +L K+V ++H +G K+SKSLGN IDP+EVIEE G D LR+ LV A G Sbjct: 500 SLEFMKEVPFKHVLIHGLVRDAQGRKMSKSLGNGIDPLEVIEEYGADTLRFTLVIGNAPG 559 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396 D + +D K ++ + AN + N SR V + L D D + T G T +D+ IL+ + Sbjct: 560 NDMRFSQD--KVELSRNFANKLWN-ASRYVLLNLTDNDTNLYTDG-LTIADKWILTRYNS 615 Query: 397 VLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 +++E+ EN++ + A ++ V SE D Y + KP L N + V V Sbjct: 616 IVKEVTENLEKFELGIAATKLYDFVWSEFCDWYIELSKP-VLYSDNLEAKKVTKSVLRYV 674 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 + LL F+P + +I+ L Sbjct: 675 LDNTLRLLHPFMPFITEEIWQNL 697 >gi|312135290|ref|YP_004002628.1| valyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] gi|311775341|gb|ADQ04828.1| valyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] Length = 874 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 75/229 (32%), Positives = 111/229 (48%), Gaps = 18/229 (7%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL------PLPKKVFSHGFIL-HKGEKISKSL 307 F+P D+ V DI+ F W A ++ + L P K V HG + +G K+SKSL Sbjct: 472 FYPTDVLVTAYDIIFF----WVARMIFSGLEHMGKEPF-KYVLIHGIVRDAQGRKMSKSL 526 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN IDP+EVIE+ G DALR+ LV I+ G D + + K N + AN I N +R V Sbjct: 527 GNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFHME--KVEANRNFANKIWN-AARFVL 583 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425 M L P FT ++ ILS ++ E+ EN++ I A ++ + + D Sbjct: 584 MNLDIDTSFKPDESKFTFTERWILSRLDTLISEVTENLEKFEIGIAAQKLYDFIWDEFCD 643 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 Y + KP L V YV + V+ + LL F+P + +I+ Sbjct: 644 WYIEMSKP-TLYNKEASNNKEVQYVLLTVLTDILKLLHPFMPFVTEEIY 691 >gi|160944580|ref|ZP_02091808.1| hypothetical protein FAEPRAM212_02094 [Faecalibacterium prausnitzii M21/2] gi|158444362|gb|EDP21366.1| hypothetical protein FAEPRAM212_02094 [Faecalibacterium prausnitzii M21/2] gi|295103338|emb|CBL00882.1| valyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3] Length = 901 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 74/269 (27%), Positives = 130/269 (48%), Gaps = 20/269 (7%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 K+ DP + W + +T G+ + F+P + V G DI+ F W + Sbjct: 465 KLTRDPD-TLDTWFSSALWPFSTLGWPNEDSADLKYFYPTNTLVTGYDIIGF----WVSR 519 Query: 279 LLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++ + L K V HG + +G K+SKSLGN IDP+EVI + G DALR+ LV Sbjct: 520 MIFSGLAYTGKAPFDTVCIHGIVRDSQGRKMSKSLGNGIDPLEVIAQYGADALRFMLVDG 579 Query: 333 IACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 G D Y ++K+V A + AN + N + + +D++ +P SD+ + Sbjct: 580 STPGNDMRY----IEKKVEAARNFANKLWNATRFVLMNLPEDFEPGLPCEELLDMSDKWV 635 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVL 448 L+ ++V + +N+++ + A A++ S + +V D + + KP L + +A T Sbjct: 636 LTKLNQVAGAMTDNLEHYEMGLAAAKINSFIWDVYCDWFIEIAKP-RLNSGDAQQADTAR 694 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V V V+ + LL F+P + +++ L Sbjct: 695 RVLVYVLDKALKLLHPFMPFITEELYQAL 723 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 31/186 (16%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTT 69 PN Q H+GHA + + D+L R R+ G L+ GTD K+ +A + G+T Sbjct: 45 PNVTGQLHMGHAVDNTMQDILIRTKRMQGYAALWVPGTDHASIATEAKVVEAMRAEGLTK 104 Query: 70 KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC-----------------RILWKK 112 ++ F + A Y + I + K+ +C + ++ + Sbjct: 105 EMV---GRDGFLERAWAWKTKYGNRIVSQLKKLGSSCDWERERFTMDEGCSEAVKEVFVR 161 Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171 + DKG IY+G + +D EV Y+ DG +++ + PV+ E G L+ Sbjct: 162 LYDKGLIYRGNRMVNWCPHCNTSISDAEVEYEEKDGSFWHLLY-PVK---ETGEMLELAT 217 Query: 172 YQDKLL 177 + + + Sbjct: 218 TRPETM 223 >gi|146297043|ref|YP_001180814.1| valyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410619|gb|ABP67623.1| valyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 874 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 122/253 (48%), Gaps = 17/253 (6%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA-FLLSANLPLPK 288 W + +T G+ + + K F+P D+ V DI+ F W A + SA + K Sbjct: 448 TWFSSALWPFSTLGWPEETEDLKY-FYPTDVLVTAYDIIFF----WVARMIFSAVEHMGK 502 Query: 289 KVFS----HGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 + F HG + +G K+SKSLGN IDP+E+IE+ G DALR+ LV I+ G D + Sbjct: 503 EPFKYVLIHGIVRDAQGRKMSKSLGNGIDPLEIIEKYGADALRFTLVTGISPGNDTRFHM 562 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 + K N + AN I N +R V M L P FT ++ ILS +++E+ E Sbjct: 563 E--KVEANRNFANKIWN-AARFVIMNLDIDTNYKPDESKFTFTERWILSRLDTLIKEVTE 619 Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461 N++ I A ++ + + D Y + KP L + V YV + V+ + L Sbjct: 620 NLEKFEIGIAAQKLYDFIWDEFCDWYIEMSKP-ILYNKEAENNKEVQYVLLTVLTNILKL 678 Query: 462 LQAFVPKLANKIF 474 L F+P + +I+ Sbjct: 679 LHPFMPFVTEEIY 691 Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 6/69 (8%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN Q H+GHA I D+L RF R+ G L+ GTD KI + + Sbjct: 36 TIVIPPPNITGQLHMGHALNNTIQDILIRFKRMQGYCALWVPGTDHASIATEAKIVEKMK 95 Query: 64 NAGVTTKVF 72 G+T ++ Sbjct: 96 EEGLTKEMI 104 >gi|149513066|ref|XP_001515174.1| PREDICTED: similar to Methionine-tRNA synthetase, partial [Ornithorhynchus anatinus] Length = 761 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 97/401 (24%), Positives = 173/401 (43%), Gaps = 48/401 (11%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ER L I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G Sbjct: 369 ERNVL-ITSALPYVNNVPHLGNIIGCVLSADVFARYARLRQWNTLYVCGTDEYGTATETK 427 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 A G+T + D+ + IS+D F RTT + + +++++ +G ++ Sbjct: 428 AMEEGLTPQQICDKYHALHATIYRWFAISFDHFGRTTTPQQTTIAQDIFQRLLARGFLHT 487 Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173 + R + D V Y+ A G + + +E + ++ Sbjct: 488 ATVAQLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKICRST 547 Query: 174 DKLLSYYESHPEFILP-IERRNE-------------------VISFVKSGLKDLSLSRKT 213 ++ S H LP +E+R E S+++ GLK ++R Sbjct: 548 PEVKS--SRHLFLDLPQLEKRLEPWLTKTLAASDWTPNARFITRSWLRDGLKPRCITRD- 604 Query: 214 FDWGIKIP--DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPADLHV-----IGK 265 WG +P D + + YVW DA YL+ T Y D + ++W V + K Sbjct: 605 LQWGTPVPLEDFQEKVFYVWFDAPIGYLSITATYTDQWE----RWWKNPEQVELYQFMAK 660 Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322 D + FH++ +P LL A N L + + ++ ++ K SKS G V + + Sbjct: 661 DNVPFHSVVFPCSLLGAEDNYTLVNHLIATEYLNYEDGKFSKSRGVGVFGDMAQGTGIPA 720 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 D R++L+ G+D + L+ + N++L N +GN ++ Sbjct: 721 DIWRFYLLFVRPEGQDSAFSWADLQLKNNSELLNNLGNFIN 761 >gi|315056245|ref|XP_003177497.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893] gi|311339343|gb|EFQ98545.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893] Length = 609 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 107/515 (20%), Positives = 206/515 (40%), Gaps = 53/515 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ + N PH+G+ +++ D AR+ R G++ L+ GTDE+G A Sbjct: 17 KRNILITSALPFVNNVPHLGNIIGSVLSGDAFARYCRGRGINTLYVGGTDEYGTTTEAKA 76 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T + D+ ++ + +IS+D F RTT + D + ++ K+ G + + Sbjct: 77 FVEKCTPQELCDKYHAIHAEVYEWFNISFDIFGRTTTQLQTDITQDIFLKLEKNGFLKER 136 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME------------- 161 + Y ++ D V Y A G + ++ ++ Sbjct: 137 MTTQLYCQEHHSFLADRFVEGECPVCGYTDARGDQCDLCGQLLESLQLKHPRCKIDGSKP 196 Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDW 216 + F L Q + +++ + S ++K GLK S++R W Sbjct: 197 ITKDTKHIFLELDKLQSNIETFFRDSAASGAWSNNSTVITSAWLKEGLKPRSITRD-IRW 255 Query: 217 GIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDIL 268 G ++P P Y ++Y W DA Y++ T + G K+W P D+ + IGKD + Sbjct: 256 GTRVPL-PGYEEKVIYSWFDACIGYVSITAQYTDQWG---KWWRNPEDVQLYQFIGKDNV 311 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRY 327 FH+ W + + ++ ++G K SKS G V + D R Sbjct: 312 VFHSDTWTKL---------HHLSTTDYLTYEGGKFSKSRGIGVFGDSAQKTGISADIWRC 362 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTE- 385 L+ D + D N L GN VSR + + + Y+ ++P + E Sbjct: 363 CLLSHRPEAGDSEFTWDAFINCNNNLLLKKFGNFVSRVLKFVNSRHYNNIVPNWTEYRED 422 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444 S ++ +++L + + I A + V+ + + + + K L + P + Sbjct: 423 SFDTFKEEINKLLAQYIQEFDAVKIRPAWSTVLQISQLGNGFLQSNKLDNSLAENEPSKC 482 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + V+ + + LA ++ ++P A I L V Sbjct: 483 AAVIGIAANTVHLLASIIAPYMPDTAKSINSQLCV 517 >gi|325263634|ref|ZP_08130368.1| valine--tRNA ligase [Clostridium sp. D5] gi|324031343|gb|EGB92624.1| valine--tRNA ligase [Clostridium sp. D5] Length = 882 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 15/262 (5%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287 W + +T G+ D + F+P D+ V G DI+ F I + F + P Sbjct: 452 TWFSSALWPFSTLGWPDKTEDLDY-FYPTDVLVTGYDIIFFWVIRMVFSGFEHTGKSPF- 509 Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDG 345 V HG + +G K+SKSLGN IDP+E+I++ G DALR LV A G D FY++ Sbjct: 510 HTVLIHGLVRDSQGRKMSKSLGNGIDPLEIIDQYGADALRLTLVTGNAPGNDMRFYNERV 569 Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405 R + AN + N SR + M +++ P E+D+ ILS + + +++ ENM Sbjct: 570 ESSR---NFANKVWN-ASRFILMNIENETLTQPETTELAEADKWILSKVNTLAKDVTENM 625 Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAIL 461 + A+ +V V + D Y + K + + K+ NP A+ L+ V+ Q + Sbjct: 626 DKFELGIAVQKVYDFVWDEFCDWYIEMAK-YRIYHKEENPQAANCALWTLKTVLGQALKM 684 Query: 462 LQAFVPKLANKIFDILFVADEN 483 L F+P + +I+ L +E+ Sbjct: 685 LHPFMPFVTEEIYKALVPEEES 706 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 +R K +T + PN + H+GHA + + D+L R+ R++G + L+ GTD Sbjct: 33 DRSKKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMEGYNALWIPGTD 84 >gi|238927599|ref|ZP_04659359.1| valine--tRNA ligase [Selenomonas flueggei ATCC 43531] gi|238884524|gb|EEQ48162.1| valine--tRNA ligase [Selenomonas flueggei ATCC 43531] Length = 887 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 81/241 (33%), Positives = 117/241 (48%), Gaps = 22/241 (9%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLG 308 F+P + V G DI+ F W A ++ L + VF HG + +G K+SKSLG Sbjct: 480 FYPTSVLVTGYDIIFF----WVARMVMMGLRFGGDVPFRDVFIHGLVRDSEGRKMSKSLG 535 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRS 365 N IDP+EVIE+ G D LR+ L+ G D FY +RV A + AN I N SR Sbjct: 536 NGIDPVEVIEKYGADTLRFMLITGNTPGNDMRFY-----WERVEAARNFANKIWN-ASRY 589 Query: 366 VSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSE 423 + M L+ D +PT +T +D ILS +++ N+++ + A + L SE Sbjct: 590 MLMNLEGSDASFVPTAEDYTLADRWILSRAEETTRDVTANLEHYELGEAGRTIYEFLWSE 649 Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 D Y + K K N +T LYV V+ + LL F+P L +I+ L A E Sbjct: 650 FCDWYIELTKARLYDKENVRAKNTALYVLRTVLERTMRLLHPFMPFLTEEIWQKLPHAGE 709 Query: 483 N 483 + Sbjct: 710 S 710 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 6/65 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN Q H+GHA + + D+L R+ R+ G +V++ G D G K+ A + Sbjct: 44 SVVIPPPNVTGQLHMGHALDNTLQDILVRYQRMRGKNVVWIPGCDHAGIATQAKVEAALR 103 Query: 64 NAGVT 68 G T Sbjct: 104 EEGTT 108 >gi|304438334|ref|ZP_07398275.1| valine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368700|gb|EFM22384.1| valine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 887 Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 81/241 (33%), Positives = 117/241 (48%), Gaps = 22/241 (9%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLG 308 F+P + V G DI+ F W A ++ L + VF HG + +G K+SKSLG Sbjct: 480 FYPTSVLVTGYDIIFF----WVARMVMMGLRFGGDVPFRDVFIHGLVRDSEGRKMSKSLG 535 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRS 365 N IDP+EVIE+ G D LR+ L+ G D FY +RV A + AN I N SR Sbjct: 536 NGIDPVEVIEKYGADTLRFMLITGNTPGNDMRFY-----WERVEAARNFANKIWN-ASRY 589 Query: 366 VSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSE 423 + M L+ D +PT +T +D ILS +++ N+++ + A + L SE Sbjct: 590 MLMNLEGSDASFVPTAEDYTLADRWILSRAEETTRDVTANLEHYELGEAGRTIYEFLWSE 649 Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 D Y + K K N +T LYV V+ + LL F+P L +I+ L A E Sbjct: 650 FCDWYIELTKARLYDKENVRAKNTALYVLRTVLERTMRLLHPFMPFLTEEIWQKLPHAGE 709 Query: 483 N 483 + Sbjct: 710 S 710 Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 6/65 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN Q H+GHA + + D+L R+ R+ G +V++ G D G K+ A + Sbjct: 44 SVVIPPPNVTGQLHMGHALDNTLQDILVRYQRMRGKNVVWIPGCDHAGIATQAKVEAALR 103 Query: 64 NAGVT 68 G T Sbjct: 104 EEGTT 108 >gi|225574666|ref|ZP_03783276.1| hypothetical protein RUMHYD_02743 [Blautia hydrogenotrophica DSM 10507] gi|225038134|gb|EEG48380.1| hypothetical protein RUMHYD_02743 [Blautia hydrogenotrophica DSM 10507] Length = 739 Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 76/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P D+ V G DI+ F I + A + P V HG + +G K+SKSLGN I Sbjct: 476 FYPTDVLVTGYDIIFFWVIRMVFSALEQTGKTPF-HHVLIHGLVRDSQGRKMSKSLGNGI 534 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 DP+EVI++ G DALR LV A G D FY + K + + AN + N SR + M L Sbjct: 535 DPLEVIDKYGADALRLTLVTGNAPGNDMRFYWE---KVEASRNFANKVWN-ASRFILMNL 590 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYF 428 + P D ILS + V QE+ ENM+ + A+ ++ + +V D Y Sbjct: 591 EGKTVTEPDLAQLNPEDRWILSKLNTVAQEVTENMEKYELGIAVQKIYDFLWDVFCDWYI 650 Query: 429 DAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 + K W+ ++ P A+ L+ V+ + LL F+P + +I+ L +E+ Sbjct: 651 EMAKVRIWKAEEA-PKEANDALWTLRTVLTEGLKLLHPFMPFITEEIYCALLPQEES 706 >gi|326429852|gb|EGD75422.1| methionyl-tRNA synthetase [Salpingoeca sp. ATCC 50818] Length = 494 Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 107/443 (24%), Positives = 187/443 (42%), Gaps = 46/443 (10%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 +K + + I++A+ Y N PH+G+ ++ ADV ARF RL + LF GTDE+G Sbjct: 11 IKGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARFCRLRDYNTLFICGTDEYGTATE 70 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGD 118 A G+ K D+ +++ D +IS+D F RT TEK+ T I W G Sbjct: 71 TKAIAEGLEPKQICDKYHAIHKEVYDWFNISFDYFGRTSTEKQTEVTQEIFW-ACHKNGF 129 Query: 119 IYKGCYSGWYSLRDEAYYND--------DEVYKGADGQYYNAQHNPV------------- 157 I + WY +++ D D Y A G + +P+ Sbjct: 130 ITQKDEEQWYCESCDSFLADRFVEGTCPDCGYTDARGDQCDECGHPLHAHQLKDPRCKYR 189 Query: 158 -------QWMEEEGYFFRLSAYQDKLLSYYESHPE-FILPIERRNEVISFVKSGLKDLSL 209 Q + L Q ++ +Y+ E + ++ S+ GL+ ++ Sbjct: 190 KDCGKTPQLRTSTHLYLCLDKLQPEMQAYFAQAVEKGVWSANAQDITQSWFDRGLEPRAI 249 Query: 210 SRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV--- 262 +R WG +P + + YVW DA Y++ T N ++W P D+ + Sbjct: 250 TRD-LKWGTPVPLEGFTDKVFYVWFDATIGYISITA---NYTDEWQQWWRNPDDVQLYQF 305 Query: 263 IGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE- 319 + KD + FH+I +P+ L+ K + + ++ ++ + SKS G + E Sbjct: 306 MAKDNVLFHSIIFPSSLIGTRETWTKVNHLSATEYLNYEDRQFSKSRGVGVFGNNAQESG 365 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 + D R++L+ D +D L + N +L N +GN V R+++ K +D + Sbjct: 366 IPADVYRFYLLYIRPETADTHFDWADLIAKHNNELLNNLGNFVHRALTFSAKFFDSKMTQ 425 Query: 380 PGAFTESDESILSVCSRVLQEIR 402 E ESI ++ V Q+ + Sbjct: 426 VVLTDEDKESIAAINEEVGQQAK 448 >gi|153852712|ref|ZP_01994149.1| hypothetical protein DORLON_00131 [Dorea longicatena DSM 13814] gi|149754354|gb|EDM64285.1| hypothetical protein DORLON_00131 [Dorea longicatena DSM 13814] Length = 886 Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 91/367 (24%), Positives = 166/367 (45%), Gaps = 47/367 (12%) Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 H V+ M ++ +F ++ + ++ +P ER N++ ++D +SR+ Sbjct: 351 HTTVEPMIKQQWFVKMEELAKPAIEAIKNGDLRFVP-ERFNKIYLHWLENIRDWCISRQI 409 Query: 214 FDWGIKIP----------------------------DDPQYIMYVWIDALTNYLTTTGYL 245 + WG +IP + + W + +T G+ Sbjct: 410 W-WGHRIPAYYCDECGEVVVGHGAPEKCPKCGCTHFTQDEDTLDTWFSSALWPFSTLGWP 468 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEK 302 D + F+P D+ V G DI+ F I + + + P VF HG + +G K Sbjct: 469 DQTEDLDY-FYPTDVLVTGYDIIFFWVIRMVFSGYAHTGKAPF-HTVFIHGLVRDSQGRK 526 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIG 359 +SKSLGN IDP+E+I++ G DALR L+ A G D FY+ +RV A + AN + Sbjct: 527 MSKSLGNGIDPLEIIDQYGADALRMTLMTGNAPGNDMRFYN-----ERVEASRNFANKVW 581 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 N SR + M L + + P +D I+S C+ +++++ ENM + AL+++ Sbjct: 582 N-ASRFIMMNLDEKELKKPANFEKRPADCWIMSKCNSLVKDVTENMDKFELGIALSKIYD 640 Query: 420 LVSE--VDRYFD-AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 + + D Y + A+ P + + A+ L+ EV+++ LL ++P + +I+ Sbjct: 641 FMWDEFCDWYIEMAKYPIYHADEDQEAANAALWTLREVLKKSLKLLHPYMPFVTEEIYSK 700 Query: 477 LFVADEN 483 L +E+ Sbjct: 701 LVPEEES 707 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 +R K +T + PN + H+GHA + + D+L R+ R+ G + L+ GTD Sbjct: 33 DRSKKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMQGYNALWIPGTD 84 >gi|219670367|ref|YP_002460802.1| valyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] gi|219540627|gb|ACL22366.1| valyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] Length = 881 Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 86/321 (26%), Positives = 143/321 (44%), Gaps = 47/321 (14%) Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDAL 235 ++D +SR+ + WG +IP +DP+ ++ W + Sbjct: 401 IRDWCISRQLW-WGHRIPVWYCEDCGAEICAKEDPETCPECGSKHIVQDPDVLDTWFSSG 459 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----KV 290 +T G+ + K +F+P + V G+DI+ F W A ++ L K KV Sbjct: 460 LWPFSTMGWPEETPELK-QFYPTSVLVTGRDIIFF----WVARMVFMGLEFMKDVPFQKV 514 Query: 291 FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 HG +L +G K+SKSLGN +DP+EVI++ G D LR+ L+ G D + + L+ Sbjct: 515 MIHGLVLDAQGRKMSKSLGNGVDPLEVIDQYGADTLRFMLITGNTPGNDLRFHPERLEAT 574 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 N AN I N SR V + L+DY+ G D ILS + E+ E ++ Sbjct: 575 RN--FANKIWN-ASRFVLLNLQDYEE--GPRGQLKLEDRWILSRYEKTAGEVTEALEQFD 629 Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 + A + + D Y + K K +P+ TV + +EV+ LL ++P Sbjct: 630 LGEAARLLYEFIWNEFCDWYIELAKGCLYDKEHPEARHTVQSILLEVLEGTMRLLHPYMP 689 Query: 468 KLANKIFDILFVADENRCFQS 488 + +I+ L ++ E+ QS Sbjct: 690 FITEEIWHNLPISGESIMIQS 710 Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 22/124 (17%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQN-AGVTTKV 71 H+GHA + I D+L RF R+ G + L+ GTD G +++AK N + + Sbjct: 55 HLGHAIDSTIQDILTRFKRMQGYNTLWLPGTDHAGIATQAKVEEQLAKEGTNRQALGREK 114 Query: 72 FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 F+D+ ++ R + D S + F T ++ + R ++ + KG IY Sbjct: 115 FLDRVWDWKKEYGGRITQQLRRLGASCDWSRERF--TMDEGCSEAVREVFVDLYHKGLIY 172 Query: 121 KGCY 124 +G Y Sbjct: 173 RGNY 176 >gi|33303731|gb|AAP22264.1| methionyl-tRNA synthetase [Bacillus cereus] gi|33303733|gb|AAP22265.1| methionyl-tRNA synthetase [Bacillus cereus] gi|33303735|gb|AAP22266.1| methionyl-tRNA synthetase [Bacillus cereus] Length = 299 Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 76/301 (25%), Positives = 138/301 (45%), Gaps = 41/301 (13%) Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT K DQ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 3 GVTAKDIADQYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVE 62 Query: 126 GWYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 63 QAYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQE 122 Query: 163 -EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGI 218 E ++F L +Q+++ + E+ + R N + +VK GL+D ++SR G+ Sbjct: 123 TEHFYFALHTFQEQIKTAVENVKQ--TGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGV 179 Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRF 270 IP +D + +YVWI+A+T Y + + + G +FW ++ +V GKD + F Sbjct: 180 PIPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGEDDQEFWDSEAKTYYVHGKDNIPF 237 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 H++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 238 HSVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFL 297 Query: 330 V 330 Sbjct: 298 T 298 >gi|89895934|ref|YP_519421.1| valyl-tRNA synthetase [Desulfitobacterium hafniense Y51] gi|89335382|dbj|BAE84977.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 881 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 86/321 (26%), Positives = 143/321 (44%), Gaps = 47/321 (14%) Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDAL 235 ++D +SR+ + WG +IP +DP+ ++ W + Sbjct: 401 IRDWCISRQLW-WGHRIPVWYCEDCGAEICAKEDPETCPECGSKHIVQDPDVLDTWFSSG 459 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----KV 290 +T G+ + K +F+P + V G+DI+ F W A ++ L K KV Sbjct: 460 LWPFSTMGWPEETPELK-QFYPTSVLVTGRDIIFF----WVARMVFMGLEFMKDMPFQKV 514 Query: 291 FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 HG +L +G K+SKSLGN +DP+EVI++ G D LR+ L+ G D + + L+ Sbjct: 515 MIHGLVLDAQGRKMSKSLGNGVDPLEVIDQYGADTLRFMLITGNTPGNDLRFHPERLEAT 574 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 N AN I N SR V + L+DY+ G D ILS + E+ E ++ Sbjct: 575 RN--FANKIWN-ASRFVLLNLQDYEE--GPRGQLKLEDRWILSRYEKTAGEVTEALEKFD 629 Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 + A + + D Y + K K +P+ TV + +EV+ LL ++P Sbjct: 630 LGEAARLLYEFIWNEFCDWYIELAKGRLYDKEHPEARHTVQSILLEVLEGTMRLLHPYMP 689 Query: 468 KLANKIFDILFVADENRCFQS 488 + +I+ L ++ E+ QS Sbjct: 690 FITEEIWHNLPISGESIMIQS 710 Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 22/124 (17%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNA-GVTTKV 71 H+GHA + I D+L RF R+ G + L+ GTD G +++AK N + + Sbjct: 55 HLGHAIDSTIQDILTRFKRMQGYNTLWLPGTDHAGIATQAKVEEQLAKEGTNRHALGREK 114 Query: 72 FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 F+D+ ++ R + D S + F T ++ + R ++ + KG IY Sbjct: 115 FLDRVWDWKKEYGGRITQQLRRLGASCDWSRERF--TMDEGCSEAVREVFVDLYHKGLIY 172 Query: 121 KGCY 124 +G Y Sbjct: 173 RGNY 176 >gi|313126424|ref|YP_004036694.1| isoleucyl-tRNA synthetase [Halogeometricum borinquense DSM 11551] gi|312292789|gb|ADQ67249.1| Isoleucyl-tRNA synthetase [Halogeometricum borinquense DSM 11551] Length = 1044 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 80/270 (29%), Positives = 128/270 (47%), Gaps = 28/270 (10%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYW 275 ++PD + VWID+ + T G LD P G++ F WPADL V D R +W Sbjct: 517 RVPD----VFDVWIDS---SVATWGTLDYP-GNETDFEELWPADLIVEAHDQTR--GWFW 566 Query: 276 PAFLL--SANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 + +A +P ++V HGF G K+SKSLGN++ P E I+ G D LR +L+ Sbjct: 567 SQLGMGTAARGEIPYEEVLMHGFANDENGRKMSKSLGNIVTPEEAIDRAGRDPLRAYLLS 626 Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIP--TPGAFTESDE 388 G D +D DGL +A N N+ + M L YD P + G + DE Sbjct: 627 HDQQGVDLSFDWDGLADTQSA--LNIFWNVFRFPLPYMELDGYDPANPDLSAGELSVVDE 684 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDA---QKPWELKKTNPDRA 444 +LS V ++ + + +H AL ++ V+E V R++ ++ WE + + R Sbjct: 685 WVLSRLQTVKADVADAWDDYEVHDALNAILDFVTEDVSRFYVKAIRERMWEEEDSESKRG 744 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + T V+ + L+ F P +A +++ Sbjct: 745 AYATLAT--VLNETVQLIAPFTPYVAERMY 772 Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 19/136 (13%) Query: 15 YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTK--- 70 Y + Q H+G A+ + D + R+ R+ G V G D HG I K + G TK Sbjct: 48 YTSGQMHLGTAWNKTLKDAIIRYKRMTGHRVTDRPGYDMHGLPIEVKVEEELGFETKRDI 107 Query: 71 ------VFVDQ----NSRNFRDMADVLD-----ISYDDFIRTTEKRHHDTCRILWKKISD 115 F+D+ RN M D + +DD +T + + + +++D Sbjct: 108 EEYGMESFIDECKSFAERNREAMDDDFQSIGVWMDWDDPYKTLSPEYMEAAWWAFDQVAD 167 Query: 116 KGDIYKGCYSGWYSLR 131 +G + +G S Y R Sbjct: 168 RGLVERGKRSVNYCPR 183 >gi|33303729|gb|AAP22263.1| methionyl-tRNA synthetase [Bacillus cereus] Length = 297 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 76/301 (25%), Positives = 138/301 (45%), Gaps = 41/301 (13%) Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 GVT K DQ F L +YD + RT + HH+T + ++ ++ ++G IYK Sbjct: 1 GVTAKDIADQYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVE 60 Query: 126 GWYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE------------- 162 Y + D E +G +A +P+ +E+ Sbjct: 61 QAYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQE 120 Query: 163 -EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGI 218 E ++F L +Q+++ + E+ + R N + +VK GL+D ++SR G+ Sbjct: 121 TEHFYFALHTFQEQIKTAVENVKQ--TGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGV 177 Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRF 270 IP +D + +YVWI+A+T Y + + + G +FW ++ +V GKD + F Sbjct: 178 PIPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGEDDQEFWDSEAKTYYVHGKDNIPF 235 Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 H++ WPA LL +P+ + S+ ++ + K+S S + +++E D++RYFL Sbjct: 236 HSVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFL 295 Query: 330 V 330 Sbjct: 296 T 296 >gi|156043243|ref|XP_001588178.1| hypothetical protein SS1G_10624 [Sclerotinia sclerotiorum 1980] gi|154695012|gb|EDN94750.1| hypothetical protein SS1G_10624 [Sclerotinia sclerotiorum 1980 UF-70] Length = 646 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 116/516 (22%), Positives = 213/516 (41%), Gaps = 51/516 (9%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + + I++A+ Y N PH+G+ ++ ADV +R+ +L L+ GTDE+G Sbjct: 11 KGKNNILITSALPYVNNVPHLGNIVGSVLSADVFSRYSKLRDRPTLYICGTDEYGTATEV 70 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A T K D+ + +D+ D +I +D F RTT + + ++ K+ G + Sbjct: 71 KALETKQTPKELCDEFHKKHKDVYDWFEIGFDYFGRTTTDQQTVIAQDIFMKLHKNGYLE 130 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH----------------NPVQWM--- 160 + + Y +++ D V QY +A+ NPV + Sbjct: 131 ERTTTQPYCEAHKSFLADRFVEGTCPKCQYDDARGDQCDKCGSLLDALELINPVCKVDGA 190 Query: 161 -----EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + F L Q + ++ +S E P + S++K GL+ S++R Sbjct: 191 TPVPRETKHIFLLLDKAQPAIEEWFNKSSEEGGWPKNGISITNSWLKQGLQGRSITRD-L 249 Query: 215 DWG--IKIPDDPQYIMYVWIDALTNYLTTTG--------YLDNPDGSKAKFWPADLHVIG 264 WG I +P + ++YVW DA Y + T + NP+ K +G Sbjct: 250 KWGTPIPLPGFEEKVLYVWFDACIGYPSITANYTKDWELWWRNPENVKL------YQFMG 303 Query: 265 KDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321 KD + FH + +P L K + + ++ ++ K SKS G V V Sbjct: 304 KDNVPFHTVIFPGSQLGTGDKWTKLNHLSTTEYLNYENGKFSKSRGVGVFGDTAKDTGVP 363 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--T 379 RY+L+ D ++ + N+ L N +GN V+R + + DG+IP + Sbjct: 364 PSVWRYYLLSNRPETADSQFEWSNFIQLNNSVLLNNLGNFVNRVIKFVNAKMDGVIPEFS 423 Query: 380 PGAFTESDE--SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437 P ES + + + + L++ +M+ I L QV+ + + + + Sbjct: 424 PEYKDESFDFPAFIEEINVQLKDYNNDMEAVKIRAGLDQVMKISTSGNNLLQYRLDNANL 483 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +P+R TV+ + + + +A + F+P + I Sbjct: 484 AEHPERTHTVIGLALNLAYLIASITSPFMPSTSESI 519 >gi|297544234|ref|YP_003676536.1| valyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842009|gb|ADH60525.1| valyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 879 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 92/323 (28%), Positives = 149/323 (46%), Gaps = 47/323 (14%) Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY---------- 226 ER ++ + ++D +SR+ + WG +IP DPQ Sbjct: 386 ERFEKIYTNWLENIRDWCISRQLW-WGHRIPAWYCDDCGHITVSRKDPQKCEACGSSHIH 444 Query: 227 ----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 ++ W + +T G+ + K F+P D+ V G DI+ F W A ++ Sbjct: 445 QDEDVLDTWFSSALWPFSTMGWPEETQDLKY-FYPTDVLVTGYDIIFF----WVARMIFM 499 Query: 283 NLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 +L K+V ++H +G K+SKSLGN IDP+EVIE+ G D LR+ LV A G Sbjct: 500 SLEFMKEVPFKHVLIHGLVRDAQGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPG 559 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396 D + +D K ++ + AN + N SR V + L D D + T G T +D+ IL+ + Sbjct: 560 NDMRFSQD--KVELSRNFANKLWN-ASRYVLLNLTDNDTNLYTDG-LTIADKWILTRYNN 615 Query: 397 VLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 +++E+ EN++ + A ++ V SE D Y + KP L N + V V Sbjct: 616 IVKEVTENLEKFELGIAATKLYDFVWSEFCDWYIELSKP-VLYSDNLEAKKVTKSVLRYV 674 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 + LL F+P + +I+ L Sbjct: 675 LDNTLRLLHPFMPFITEEIWQNL 697 >gi|154316456|ref|XP_001557549.1| hypothetical protein BC1G_04159 [Botryotinia fuckeliana B05.10] gi|150845959|gb|EDN21152.1| hypothetical protein BC1G_04159 [Botryotinia fuckeliana B05.10] Length = 642 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 118/521 (22%), Positives = 214/521 (41%), Gaps = 53/521 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + + I++A+ Y N PH+G+ ++ ADV +R+ +L L+ GTDE+G Sbjct: 11 KGKNNILITSALPYVNNVPHLGNIVGSVLSADVFSRYSKLRDRPTLYICGTDEYGTATEV 70 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 A T K D+ + +D+ D +I +D F RTT ++ + ++ K+ G + Sbjct: 71 KALETKQTPKELCDEFHKKHKDVYDWFEIGFDYFGRTTTEQQTIIAQDIFMKLHKNGYLE 130 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH----------------NPVQWM--- 160 + + Y + +++ D V QY +A+ NPV + Sbjct: 131 ERTTTQPYCEKHQSFLADRFVEGTCPKCQYDDARGDQCDKCGSLLDALELINPVCKVDGA 190 Query: 161 -----EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E + F L Q + ++ +S E P + S++K GL+ S++R Sbjct: 191 TPIPRETKHIFLLLDKAQPAIEEWFNKSSEEGGWPKNGISITNSWLKQGLQGRSITRD-L 249 Query: 215 DWGIKIPDDPQY---IMYVWIDALTNYLTTTG--------YLDNPDGSKAKFWPADLHVI 263 WG IP P Y ++YVW DA Y + T + +P+ K + Sbjct: 250 KWGTPIPL-PGYENKVLYVWFDACIGYPSITANYTKDWELWWRDPENVKL------YQFM 302 Query: 264 GKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEV 320 GKD + FH + +P L K + + ++ ++ K SKS G V V Sbjct: 303 GKDNVPFHTVIFPGSQLGTGDKWTKLNHLSTTEYLNYENGKFSKSRGVGVFGDTAKDTGV 362 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-- 378 RY+L+ D ++ + N+ L N +GN V+R V + DG+IP Sbjct: 363 PPSVWRYYLLSNRPETADSQFEWANFIQLNNSVLLNNLGNFVNRVVKFVNAKMDGVIPEF 422 Query: 379 TPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 +P E + + + L++ +M+ I L QV+ + + + + Sbjct: 423 SPEYKDEKFDAPAFIEEINAQLKDYNSDMEAVKIRVGLDQVMKISTSGNNLLQYRLDNAN 482 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +P+R TV+ + + + +A + F+P + I L Sbjct: 483 LAEHPERTHTVIGLALNLAYLIASITSPFMPSTSESIVSQL 523 >gi|160933630|ref|ZP_02081018.1| hypothetical protein CLOLEP_02484 [Clostridium leptum DSM 753] gi|156867507|gb|EDO60879.1| hypothetical protein CLOLEP_02484 [Clostridium leptum DSM 753] Length = 874 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFIL-HKGEKISKSLG 308 F+P D V G DI+ F W A ++ + L +P K VF HG + +G K+SKSLG Sbjct: 476 FYPTDTLVTGYDIIFF----WVARMIFSGLEHMGDIPFKTVFFHGLVRDAQGRKMSKSLG 531 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 N IDPIEVIE+ G DALR+ LV + G D + ++ L+ N AN I N +R + M Sbjct: 532 NGIDPIEVIEKYGADALRFTLVTGNSPGNDMRFTEEKLESSRN--FANKIWN-AARFIHM 588 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 + +D P + T D+ I+S + V +E+ EN++ + A+ ++ + + D Sbjct: 589 NIDGFDVKNELPESLTLEDQWIVSALNTVTKEVTENLEKYELGIAVQKLYDFIWDQFCDW 648 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y + K + K + + V V + L+ F+P + +I+ + Sbjct: 649 YIELAKTRLMAKD--ETSVGARQVLVWTFTSILKLMHPFMPYITEEIWQTM 697 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 6/70 (8%) Query: 5 EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58 EK + I PN Q H+GHA + I D+L RF R+ G L+ GTD KI Sbjct: 35 EKKPYTIVIPPPNITGQLHMGHALDETIQDILIRFKRMQGYSALWLPGTDHASIATEAKI 94 Query: 59 AKAAQNAGVT 68 +A + G+T Sbjct: 95 VEAMKKEGLT 104 >gi|162447403|ref|YP_001620535.1| valyl-tRNA synthetase [Acholeplasma laidlawii PG-8A] gi|161985510|gb|ABX81159.1| valyl-tRNA synthetase [Acholeplasma laidlawii PG-8A] Length = 859 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 78/304 (25%), Positives = 144/304 (47%), Gaps = 39/304 (12%) Query: 202 SGLKDLSLSRKTFDWGIKIP------------DDP-------QYIMYVWIDALTNYLTTT 242 + ++D ++SR+ + WG +IP + P + ++ W + +T Sbjct: 394 NNIQDWTISRQLW-WGHRIPAWFKGDEVKVQVESPGVDWTQDEDVLDTWFSSALWPFSTL 452 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL 297 G+ + D + +++P D+ V G DI+ F W A ++ L KK V HG I Sbjct: 453 GWPNEDDPNFKRYYPTDVLVTGYDIIFF----WVARMMFQGLEFTKKDPFKTVLLHGLIR 508 Query: 298 -HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 +G K+SKSL N +DP++VI++ GVDALR+F+V A G+D YD ++ N N Sbjct: 509 DEQGRKMSKSLNNGVDPMDVIDKYGVDALRFFIVSNAAPGQDTRYDITKIESSWN--FIN 566 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416 + N ++R VS+ +KD ++ D+ IL+ S + E + + + A Sbjct: 567 KLWN-ITRFVSLNIKD-KSLVIDEDRLNVFDKWILTRLSETITEADKYYERFEFNEASRV 624 Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + + + E + Y + K + +P V + V++ + LL F+P + +K++ Sbjct: 625 LTNFIWEEFANWYLEISK---VSLQDPKIEQNTQAVLIYVLKDILKLLHPFLPFVTDKLY 681 Query: 475 DILF 478 +F Sbjct: 682 MDIF 685 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 K+ K + I PN + H+GHA++ I D++ R R+ G D L+ G D G Sbjct: 32 KDLNKTPFTVVIPPPNVTGKLHLGHAWDTAIQDIIIRRKRMQGFDALYLPGMDHAG 87 >gi|158321063|ref|YP_001513570.1| valyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] gi|158141262|gb|ABW19574.1| valyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] Length = 884 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 78/259 (30%), Positives = 128/259 (49%), Gaps = 16/259 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAI--YWPAFLLSA 282 ++ W + +T G+ P+ +K F+P D+ V G DI+ F + + Sbjct: 450 VLDTWFSSALWPFSTLGW---PEATKELEYFYPTDVLVTGYDIIFFWVVRMAFSGLEFME 506 Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341 N+P K VF HG + +G K+SKSLGN IDP+E+I++ G DALR+ LV + G D + Sbjct: 507 NVPF-KHVFLHGLVRDAEGRKMSKSLGNGIDPLEIIDQYGADALRFTLVTGNSPGNDMRF 565 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQE 400 + L+ N AN + N +R V M L+ D+ FT +D+ I+S ++V +E Sbjct: 566 HMEKLESSRN--FANKLWN-ATRFVLMNLEVDHIEKSSVESNFTIADKWIISRMNKVAKE 622 Query: 401 IRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 + ENM + A+ ++ + SE D Y + KP L + + Y V+ + Sbjct: 623 MTENMDKFELGIAVQKLYDFIWSEYCDWYIELVKP-RLYGEDTEAKRAAQYTLTYVLENI 681 Query: 459 AILLQAFVPKLANKIFDIL 477 LL F+P + +I+ L Sbjct: 682 LKLLHPFMPFITEEIWQNL 700 >gi|256751768|ref|ZP_05492641.1| valyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|256749296|gb|EEU62327.1| valyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] Length = 879 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 91/323 (28%), Positives = 150/323 (46%), Gaps = 47/323 (14%) Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY---------- 226 ER ++ + +KD +SR+ + WG +IP DP+ Sbjct: 386 ERFEKIYTNWLENIKDWCISRQLW-WGHRIPAWYCDDCGHITVSRKDPEKCEACGSTNIH 444 Query: 227 ----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 ++ W + +T G+ + + + F+P D+ V G DI+ F W A ++ Sbjct: 445 QDEDVLDTWFSSALWPFSTMGWPEETEDLRY-FYPTDVLVTGYDIIFF----WVARMIFM 499 Query: 283 NLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 +L K+V ++H +G K+SKSLGN IDP+EVIE+ G D LR+ LV A G Sbjct: 500 SLEFMKEVPFKHVLIHGLVRDAQGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPG 559 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396 D + +D K ++ + AN + N SR V + L D D + T G T +D+ IL+ + Sbjct: 560 NDMRFSQD--KVELSRNFANKLWN-ASRYVLLNLTDNDTNLYTEG-LTIADKWILTRYNN 615 Query: 397 VLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 +++E+ EN++ + A ++ V SE D Y + KP L N + V V Sbjct: 616 IVKEVTENLEKFELGIAATKLYDFVWSEFCDWYIELSKP-VLYSDNLEAKKVTKSVLRYV 674 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 + LL F+P + +I+ L Sbjct: 675 LDNTLRLLHPFMPFITEEIWQNL 697 >gi|282600751|ref|ZP_05979667.2| valine--tRNA ligase [Subdoligranulum variabile DSM 15176] gi|282571616|gb|EFB77151.1| valine--tRNA ligase [Subdoligranulum variabile DSM 15176] Length = 926 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/361 (24%), Positives = 151/361 (41%), Gaps = 47/361 (13%) Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 H+ ++ M + +F ++ + E +P I+++K G +D +SR+ Sbjct: 398 HSVIEPMVSKQWFVKMEPLAGPAIEAVEKGDIKFVPERFTKNYINWMKGG-RDWCISRQL 456 Query: 214 FDWGIKIP-----------------------------DDPQYIMYVWIDALTNYLTTTGY 244 + WG +IP DP + W + +T G+ Sbjct: 457 W-WGHQIPAWYCDDCGETVVAKEAPSVCPKCGSTHLTQDPD-TLDTWFSSALWPFSTLGW 514 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-H 298 D F+P + V G DI+ F W + ++ + L K V HG + Sbjct: 515 PDENAPDYNYFYPTNTLVTGYDIIGF----WVSRMIFSGLAYTGKAPFDTVLIHGIVRDS 570 Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 +G K+SKSLGN IDP+EVI++ G DALR L+ G D Y + K + + AN + Sbjct: 571 QGRKMSKSLGNGIDPLEVIDQYGADALRMMLIVGSTAGNDMRYSDE--KVTASRNFANKL 628 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 N + + +D+ +P SD+ +LS ++V E N+ + A +V Sbjct: 629 WNAARFVLMNLPEDFQPGMPEESLLDMSDKWVLSELAKVTAEATANLDKYELGLAAEKVE 688 Query: 419 SLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 + + EV D Y + K L + +A T V V V+ + LL F+P + +I+ Sbjct: 689 NFIWEVYCDWYIEICKS-RLNSDDAVQADTARKVLVYVLDKALKLLHPFMPFITEEIYQA 747 Query: 477 L 477 L Sbjct: 748 L 748 >gi|320530417|ref|ZP_08031475.1| valyl-tRNA synthetase [Selenomonas artemidis F0399] gi|320137250|gb|EFW29174.1| valyl-tRNA synthetase [Selenomonas artemidis F0399] Length = 887 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 84/265 (31%), Positives = 123/265 (46%), Gaps = 27/265 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + T G+ PD +K F+P V G DI+ F W A ++ L Sbjct: 453 VLDTWFSSGLWPFETMGW---PDDTKDLRHFYPTAALVTGYDIIFF----WVARMVMMGL 505 Query: 285 PLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 + VF HG + +G K+SKSLGN IDP+EVIE+ G D LR+ L+ G D Sbjct: 506 RFGGDVPFRDVFIHGLVRDSEGRKMSKSLGNGIDPVEVIEKYGADTLRFMLITGNTPGND 565 Query: 339 -GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVC 394 FY +RV A + AN I N SR + M + D +P +T +D ILS C Sbjct: 566 MRFY-----WERVEAARNFANKIWN-ASRYMLMNFEGADTSFVPAAEDYTLADRWILSRC 619 Query: 395 SRVLQEIRENMQNQLIHRALAQVIS-LVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + +++ N++ + A + L SE D Y + K K N +T LYV Sbjct: 620 AVTARDVTANLEKYELGEAGRTIYEFLWSEFCDWYIELTKARLYDKENVRAKNTALYVLR 679 Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477 V+ + LL F+P L +I+ L Sbjct: 680 TVLERTLRLLHPFMPFLTEEIWQKL 704 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN Q H+GHA + + D+L R+ R+ G +V++ G D +AG+ Sbjct: 44 SVVIPPPNVTGQLHMGHALDNTLQDILVRYQRMRGKNVIWVPGCD-----------HAGI 92 Query: 68 TTKVFVDQNSR 78 T+ V+++ R Sbjct: 93 ATQAKVEESLR 103 >gi|289449837|ref|YP_003474971.1| valine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184384|gb|ADC90809.1| valine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 885 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 16/235 (6%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308 F+ D+ V DI+ F W A ++ + L ++ H ++H +G K+SKSLG Sbjct: 480 FYQTDVLVTAYDIIFF----WVARMIFSALAQTEQPPFHTVLIHGLVRDSQGRKMSKSLG 535 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 N IDP+ VI+ G DALRY L++ + G D Y ++ K N I N + Sbjct: 536 NGIDPLGVIDRYGADALRYSLIQGNSQGNDFRYQEE--KVEAGRAFVNKIWNATRFVLMN 593 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 KDY G P F D ILS +V+ EI +N+ + ALA++ + + E D Sbjct: 594 FPKDYTGK-HDPSKFLPEDAWILSRLQQVIGEINQNLDKYELGIALAKIYNFIWEEFCDW 652 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 Y + KP P R YV EV+ + LL F+P + +++ L +++ Sbjct: 653 YIEMVKPRMNDAAAPSR-DEAFYVLNEVVTAVLKLLHPFMPFVTEELYKSLPLSE 706 >gi|197303308|ref|ZP_03168348.1| hypothetical protein RUMLAC_02031 [Ruminococcus lactaris ATCC 29176] gi|197297592|gb|EDY32152.1| hypothetical protein RUMLAC_02031 [Ruminococcus lactaris ATCC 29176] Length = 882 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 80/269 (29%), Positives = 129/269 (47%), Gaps = 19/269 (7%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287 W + +T G+ D + F+P D+ V G DI+ F I + + + P Sbjct: 452 TWFSSALWPFSTLGWPDKTEDLDY-FYPTDVLVTGYDIIFFWVIRMVFSGYAHTGKAPF- 509 Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDG 345 V HG + +G K+SKSLGN IDP+E+I++ G DALR L+ A G D FY+ Sbjct: 510 NTVLIHGLVRDSQGRKMSKSLGNGIDPLEIIDQYGADALRLTLITGNAPGNDMRFYN--- 566 Query: 346 LKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 +RV A + AN + N SR + M +K+ P T +D ILS + + +++ E Sbjct: 567 --ERVEASRNFANKVWN-ASRFILMNMKENVVEKPEDALLTPADRWILSAVNTLAKDVTE 623 Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLA 459 NM + A+ +V + + D Y + K + + D+A+ VL+V V+ Q Sbjct: 624 NMDKFELGIAVQKVYDFIWDEFCDWYVELAK-YRIWHAEEDQAAANCVLWVLKTVLGQAL 682 Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQS 488 LL F+P + +I+ L +E+ S Sbjct: 683 KLLHPFMPFITEEIYLALVPEEESLMMSS 711 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 +R K +T + PN + H+GHA + + D+L R+ R++G + L+ GTD Sbjct: 33 DRSKKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMEGYNALWIPGTD 84 >gi|307265322|ref|ZP_07546879.1| valyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919606|gb|EFN49823.1| valyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] Length = 879 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/312 (28%), Positives = 145/312 (46%), Gaps = 47/312 (15%) Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWID 233 +KD +SR+ + WG +IP DP+ ++ W Sbjct: 397 ENIKDWCISRQLW-WGHRIPAWYCDDCGHITVSRKDPEKCEACGSTNIHQDEDVLDTWFS 455 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 + +T G+ + + + F+P D+ V G DI+ F W A ++ +L K+V Sbjct: 456 SALWPFSTMGWPEETEDLRY-FYPTDVLVTGYDIIFF----WVARMIFMSLEFMKEVPFK 510 Query: 294 GFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 ++H +G K+SKSLGN IDP+EVIE+ G D LR+ LV A G D + +D K Sbjct: 511 HVLIHGLVRDAQGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPGNDMRFSQD--K 568 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 ++ + AN + N SR V + L D D + T G T +D+ IL+ + +++E+ EN++ Sbjct: 569 VELSRNFANKLWN-ASRYVLLNLTDNDTNLYTEG-LTIADKWILTRYNNIVKEVTENLEK 626 Query: 408 QLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465 + A ++ V SE D Y + KP L N + V V+ LL F Sbjct: 627 FELGIAATKLYDFVWSEFCDWYIELSKP-VLYSDNLEAKKVTKSVLRYVLDNTLRLLHPF 685 Query: 466 VPKLANKIFDIL 477 +P + +I+ L Sbjct: 686 MPFITEEIWQNL 697 >gi|188585735|ref|YP_001917280.1| valyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350422|gb|ACB84692.1| valyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 885 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 18/269 (6%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 DP ++ W + +T G+ D D + KF+P D+ V G DI+ F W A ++ Sbjct: 446 DPD-VLDTWFSSALWPFSTMGWPDETDDLQ-KFYPTDVLVTGYDIIFF----WVARMIFM 499 Query: 283 NLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 L K+ VF HG + G K+SKSLGN IDP+E+I+E G D LRY LV I G Sbjct: 500 GLEFMKERPFDDVFIHGLVRDAHGRKMSKSLGNGIDPLEIIDEYGADTLRYTLVTGITPG 559 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVC 394 D + D ++ N AN I N SR M L +Y M +P + +D+ IL Sbjct: 560 NDMRFSYDKVEASRN--FANKIWN-ASRFAIMNLDNYQPMELSPEDDRLSLADKWILHRM 616 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 + V+ ++ M + A + + SE ++ L + + + S + V Sbjct: 617 NEVIDDVTRLMDKYELGEASKTLYEFIWSEFCDWYIEMAKIRLYQGSEEEKSLTQEILVR 676 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADE 482 + + LL F+P L+ +I L DE Sbjct: 677 GLDTILRLLHPFMPFLSEEIRSHLPHTDE 705 Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 25/138 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAK-AA 62 S I PN H+GHA + + DV+ RF R+ G D L+ GTD G K+ + A Sbjct: 40 SVVIPPPNVTGSLHMGHALDNTLQDVIVRFKRMQGYDTLWMPGTDHAGIATQTKVEEHLA 99 Query: 63 QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106 Q GV+ + + D + + + +D S + F T ++ Sbjct: 100 QEDGVSKYDLGREKFLEKVWAWKETYHDSITNQLKKLGVSVDWSRERF--TMDEGCSKAV 157 Query: 107 RILWKKISDKGDIYKGCY 124 R ++ + +KG IY+G Y Sbjct: 158 REVFVSLYEKGLIYQGDY 175 >gi|296134048|ref|YP_003641295.1| valyl-tRNA synthetase [Thermincola sp. JR] gi|296032626|gb|ADG83394.1| valyl-tRNA synthetase [Thermincola potens JR] Length = 883 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 70/228 (30%), Positives = 112/228 (49%), Gaps = 10/228 (4%) Query: 255 FWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P + V G+DI+ F + + A +P ++VF HG +L +G K+SKSLGN + Sbjct: 478 FYPTSVLVTGRDIIFFWVARMIFMAMEFMKEVPF-REVFIHGLVLDAQGRKMSKSLGNGV 536 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 DPIEVIE+ G D LR+ L+ G D + + L N AN I N SR V M L+ Sbjct: 537 DPIEVIEKYGADTLRFMLITGNTPGNDLRFHFERLDNTRN--FANKIWN-ASRFVLMNLE 593 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429 D+ P P ++ +D+ I S ++ ++ + + ++ + A + + D Y + Sbjct: 594 DFKPGEP-PKDYSPADKWIKSRFNKTVKTVTDALEAYNLGEAAQSLYEFIWNEFCDWYIE 652 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 KP K +P T YV V+ LL F+P + +I+ L Sbjct: 653 LVKPVLYGKESPAARYTAQYVLWSVLEGTMRLLHPFMPFITEEIWQHL 700 >gi|225026786|ref|ZP_03715978.1| hypothetical protein EUBHAL_01038 [Eubacterium hallii DSM 3353] gi|224955905|gb|EEG37114.1| hypothetical protein EUBHAL_01038 [Eubacterium hallii DSM 3353] Length = 880 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 101/413 (24%), Positives = 175/413 (42%), Gaps = 73/413 (17%) Query: 128 YSLRDEAYYNDDEVYKGADGQY-----YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 ++L + NDD G++ Y A+ V+ +EE GY R+ ++ + ++ Sbjct: 290 HNLEEINILNDDGTINENGGKFEGMDRYEARKAIVKELEEGGYLVRIENHEHNVGTHDRC 349 Query: 183 HPE---------FILPIERRNEVISFVKSG-------------------LKDLSLSRKTF 214 H F+ E I VK+G ++D +SR+ + Sbjct: 350 HTTVEPMVKKQWFVKMNEMAKPAIEAVKNGDLRFVPGHFDRTYLHWLENIRDWCISRQLW 409 Query: 215 DWGIKIP----DDPQYIMY------------------------VWIDALTNYLTTTGYLD 246 WG +IP DD I+ W + +T G+ D Sbjct: 410 -WGHRIPAYYCDDCGEIVVAKETPSVCPKCGCTHFTQDEDTLDTWFSSALWPFSTLGWPD 468 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKI 303 + F+P ++ V G DI+ F I + + + P V HG + +G K+ Sbjct: 469 KTEDLDY-FYPTNVLVTGYDIIFFWVIRMVFSGYEQTGKCPF-SDVLIHGLVRDEQGRKM 526 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGN IDP+E+I++ G DALR LV A G D Y + + N AN + N S Sbjct: 527 SKSLGNGIDPLEIIDQYGADALRLTLVTGNAPGNDMRYSEKKIIASRN--FANKVWN-AS 583 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R + M ++ D + T +D+ ILS + +++E+ +NM+N A++++ + E Sbjct: 584 RFMLMNIEKADLSNVSLDDLTPADKWILSKANSLVKEVTDNMENYDFGVAVSKLNDFIWE 643 Query: 424 --VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 D Y + KP + + +A+ L+ +V+ LL ++P + +IF Sbjct: 644 EFCDWYIEMVKPRLYNEEDTTKAA-ALFTLKKVLTISLKLLHPYMPFITEEIF 695 Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 7/71 (9%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +R K + + PN Q H+GHA + + D+L RF R+ G + L+ GTD A Sbjct: 33 DRSKKPFTIVMPPPNITGQLHMGHALDNTLQDILIRFKRMQGYNALWQPGTDH-----AS 87 Query: 61 AAQNAGVTTKV 71 A VT K+ Sbjct: 88 IATEVKVTNKL 98 >gi|260888326|ref|ZP_05899589.1| valine--tRNA ligase [Selenomonas sputigena ATCC 35185] gi|260861862|gb|EEX76362.1| valine--tRNA ligase [Selenomonas sputigena ATCC 35185] Length = 892 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 82/262 (31%), Positives = 123/262 (46%), Gaps = 25/262 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + T G+ + K +F+P + V G DI+ F W A ++ L Sbjct: 456 VLDTWFSSGLWPFETMGWPEETPELK-QFYPTSVLVTGYDIIFF----WVARMVMMGLEF 510 Query: 287 PK-----KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-G 339 K VF HG + +G K+SKSLGN IDP+EVI++ G D LR+ L+ G D Sbjct: 511 GKDIPFHHVFIHGLVRDSEGRKMSKSLGNGIDPVEVIDKYGADTLRFMLITGNTPGNDMR 570 Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSR 396 FY +RV A + AN + N SR + M L+D+D G PT +T +D ILS C + Sbjct: 571 FY-----WERVEAARNFANKLWN-ASRFMLMNLEDFDAGFTPTAEDYTLADRWILSRCQK 624 Query: 397 VLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRAS--TVLYVTV 452 + +N++ + A + + SE D Y + K K S T YV Sbjct: 625 TAAGVTQNLEKFELGEAGRMIYEFIWSEFCDWYIELAKARLYDKDAAGERSKKTAQYVLS 684 Query: 453 EVIRQLAILLQAFVPKLANKIF 474 V+ + LL F+P L +I+ Sbjct: 685 YVLERTLRLLHPFMPFLTEEIW 706 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QK 57 E K S I PN Q H+GHA + + D+L R+ R+ G + L+ G D G Q Sbjct: 40 EEGKKPFSIVIPPPNVTGQLHMGHALDNTLQDILIRWRRMQGYNTLWMPGCDHAGIATQA 99 Query: 58 IAKAAQNAGVTTK 70 +AA A T + Sbjct: 100 KVEAALRAEGTNR 112 >gi|326390738|ref|ZP_08212292.1| valyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] gi|325993275|gb|EGD51713.1| valyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 879 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 89/312 (28%), Positives = 145/312 (46%), Gaps = 47/312 (15%) Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWID 233 +KD +SR+ + WG +IP DP+ ++ W Sbjct: 397 ENIKDWCISRQLW-WGHRIPAWYCDDCGHITVSRKDPEKCEACGSTNIHQDEDVLDTWFS 455 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 + +T G+ + + + F+P D+ V G DI+ F W A ++ +L K+V Sbjct: 456 SALWPFSTMGWPEETEDLRY-FYPTDVLVTGYDIIFF----WVARMIFMSLEFMKEVPFK 510 Query: 294 GFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 ++H +G K+SKSLGN IDP+EVIE+ G D LR+ LV A G D + +D K Sbjct: 511 HVLIHGLVRDAQGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPGNDMRFSQD--K 568 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 ++ + AN + N SR V + L D D + T G T +D+ IL+ + +++E+ EN++ Sbjct: 569 VELSRNFANKLWN-ASRYVLLNLTDNDTNLYTEG-LTIADKWILTRYNNIVKEVTENLEK 626 Query: 408 QLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465 + A ++ V SE D Y + KP L N + V V+ LL F Sbjct: 627 FELGIAATKLYDFVWSEFCDWYIELSKP-VLYSDNLEAKKVTKSVLRYVLDNTLRLLHPF 685 Query: 466 VPKLANKIFDIL 477 +P + +I+ L Sbjct: 686 MPFITEEIWQNL 697 >gi|313894948|ref|ZP_07828507.1| valine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] gi|312976401|gb|EFR41857.1| valine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] Length = 887 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 83/265 (31%), Positives = 123/265 (46%), Gaps = 27/265 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + T G+ PD +K F+P V G DI+ F W A ++ L Sbjct: 453 VLDTWFSSGLWPFETMGW---PDDTKDLRHFYPTAALVTGYDIIFF----WVARMVMMGL 505 Query: 285 PLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 + +F HG + +G K+SKSLGN IDP+EVIE+ G D LR+ L+ G D Sbjct: 506 RFGGDVPFRDIFIHGLVRDSEGRKMSKSLGNGIDPVEVIEKYGADTLRFMLITGNTPGND 565 Query: 339 -GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVC 394 FY +RV A + AN I N SR + M + D +P +T +D ILS C Sbjct: 566 MRFY-----WERVEAARNFANKIWN-ASRYMLMNFEGADTSFVPAAEDYTLADRWILSRC 619 Query: 395 SRVLQEIRENMQNQLIHRALAQVIS-LVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + +++ N++ + A + L SE D Y + K K N +T LYV Sbjct: 620 AVTARDVTANLEKYELGEAGRTIYEFLWSEFCDWYIELTKARLYDKENVRAKNTALYVLR 679 Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477 V+ + LL F+P L +I+ L Sbjct: 680 TVLERTLRLLHPFMPFLTEEIWQKL 704 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN Q H+GHA + + D+L R+ R+ G +V++ G D +AG+ Sbjct: 44 SVVIPPPNVTGQLHMGHALDNTLQDILVRYQRMRGKNVIWVPGCD-----------HAGI 92 Query: 68 TTKVFVDQNSR 78 T+ V+++ R Sbjct: 93 ATQAKVEESLR 103 >gi|330838350|ref|YP_004412930.1| Valyl-tRNA synthetase [Selenomonas sputigena ATCC 35185] gi|329746114|gb|AEB99470.1| Valyl-tRNA synthetase [Selenomonas sputigena ATCC 35185] Length = 886 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 82/262 (31%), Positives = 123/262 (46%), Gaps = 25/262 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + T G+ + K +F+P + V G DI+ F W A ++ L Sbjct: 450 VLDTWFSSGLWPFETMGWPEETPELK-QFYPTSVLVTGYDIIFF----WVARMVMMGLEF 504 Query: 287 PK-----KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-G 339 K VF HG + +G K+SKSLGN IDP+EVI++ G D LR+ L+ G D Sbjct: 505 GKDIPFHHVFIHGLVRDSEGRKMSKSLGNGIDPVEVIDKYGADTLRFMLITGNTPGNDMR 564 Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSR 396 FY +RV A + AN + N SR + M L+D+D G PT +T +D ILS C + Sbjct: 565 FY-----WERVEAARNFANKLWN-ASRFMLMNLEDFDAGFTPTAEDYTLADRWILSRCQK 618 Query: 397 VLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRAS--TVLYVTV 452 + +N++ + A + + SE D Y + K K S T YV Sbjct: 619 TAAGVTQNLEKFELGEAGRMIYEFIWSEFCDWYIELAKARLYDKDAAGERSKKTAQYVLS 678 Query: 453 EVIRQLAILLQAFVPKLANKIF 474 V+ + LL F+P L +I+ Sbjct: 679 YVLERTLRLLHPFMPFLTEEIW 700 Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QK 57 E K S I PN Q H+GHA + + D+L R+ R+ G + L+ G D G Q Sbjct: 34 EEGKKPFSIVIPPPNVTGQLHMGHALDNTLQDILIRWRRMQGYNTLWMPGCDHAGIATQA 93 Query: 58 IAKAAQNAGVTTK 70 +AA A T + Sbjct: 94 KVEAALRAEGTNR 106 >gi|257413958|ref|ZP_05591858.1| valine--tRNA ligase [Roseburia intestinalis L1-82] gi|257201722|gb|EEV00007.1| valine--tRNA ligase [Roseburia intestinalis L1-82] Length = 651 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 78/257 (30%), Positives = 122/257 (47%), Gaps = 17/257 (6%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287 W + +T G+ D + F+P D+ V G DI+ F I + + P Sbjct: 221 TWFSSALWPFSTLGWPDKTEDLDY-FYPTDVLVTGYDIIFFWVIRMIFSGYEQMGKAPFH 279 Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDG 345 +F HG + +G K+SKSLGN IDP+EVI++ G DALR L+ A G D FY Sbjct: 280 TVLF-HGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLITGNAPGNDMRFY---- 334 Query: 346 LKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 +RV A + AN + N SR + M L+ + P+ G +D+ ILS + + +++ E Sbjct: 335 -WERVEASRNFANKVWN-ASRFIMMNLEGSEIKEPSLGELKPADKWILSKVNTLAKDVTE 392 Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAI 460 NM + A+ +V + + D Y + K K N P A+ + V+ + Sbjct: 393 NMDKYEMGIAVQKVYDFIWDEFCDWYIEITKTRTYNKENDPASANAAFWTLKTVLTEALK 452 Query: 461 LLQAFVPKLANKIFDIL 477 LL F+P + +IF L Sbjct: 453 LLHPFMPFITEEIFCTL 469 >gi|317123025|ref|YP_004103028.1| valyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] gi|315593005|gb|ADU52301.1| valyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] Length = 973 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 43/276 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F R+ + + + I+P ER V ++D +SR+ + WG +IP Sbjct: 408 WFIRMKPLAEPAMEAVRTGRTRIVP-ERFTRVYLHWLENVRDWCISRQIW-WGHRIPAWY 465 Query: 222 -----------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256 +DP+ ++ W + +T G+ D +F+ Sbjct: 466 CQRCGETVVAREDPERCPRCGSAELHQDEDVLDTWFSSALWPFSTLGWPDKDSPDLRRFY 525 Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFIL-HKGEKISKSLGNV 310 P + V G DIL +W A ++ L +P + V HG + KG+K+SKS GNV Sbjct: 526 PTSVLVTGYDIL----FFWVARMMVMGLEFMGDVPFRTVLLHGLVRDAKGQKMSKSRGNV 581 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 +DP+EVI++ G DALR+ LV +A G D + + + + + AN + N +R V M L Sbjct: 582 VDPLEVIDKYGADALRFTLVTGLAPGNDARFSWE--RAEASRNFANKLWN-AARFVLMNL 638 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 +D+D P +D IL+ V E++ ++ Sbjct: 639 QDFDPARGEPERDNAADRWILARLDAVTAEVQRLLE 674 Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 22/167 (13%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKI--AKAA 62 S I PN HIGHA + D+LAR+HR+ G L+ GTD G Q + + A Sbjct: 85 SMVIPPPNVTGNLHIGHALNNTMQDILARWHRMQGDVTLWVPGTDHAGIATQHVVEVRLA 144 Query: 63 QNAGVTTK------------VFVDQNSRNFRDMADVLDISYD-DFIR-TTEKRHHDTCRI 108 + G+ + + +Q N L S D D +R T ++ R Sbjct: 145 KEEGLRRQDLGRERFLERVWAWKNQYEANILGQLRRLGASVDWDRLRFTMDEGCSRAVRE 204 Query: 109 LWKKISDKGDIYKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W + A + + ++ +G+ Y+ ++ Sbjct: 205 VFVRLYEKGLIYRGDYMVNWCPVCHTALADIEVEHEEREGRLYHLRY 251 >gi|238917219|ref|YP_002930736.1| valyl-tRNA synthetase [Eubacterium eligens ATCC 27750] gi|238872579|gb|ACR72289.1| valyl-tRNA synthetase [Eubacterium eligens ATCC 27750] Length = 920 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 98/347 (28%), Positives = 153/347 (44%), Gaps = 56/347 (16%) Query: 146 DGQYYNAQHNPVQWMEEEGYFF--RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203 D YYN N W ++ R+ AY Y + E + R++V + K G Sbjct: 427 DKTYYNWTDNIRDWCISRQLWWGHRIPAY------YCKDCGEMTV---SRDKVCTCPKCG 477 Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLH 261 ++ T D W + +T G+ PD + F+P D+ Sbjct: 478 SANVEQDPDTLD--------------TWFSSALWPFSTLGW---PDKTPELDYFYPTDVL 520 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFS----HGFILH-KGEKISKSLGNVIDPIEV 316 V G DI+ F I + S + KK F HG + +G K+SKSLGN IDP+EV Sbjct: 521 VTGYDIIFFWVI---RMIFSGYEHMGKKPFGKVLFHGLVRDDQGRKMSKSLGNGIDPLEV 577 Query: 317 IEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDY 373 I++ G DALRY L+ A G D FY RV A + AN + N SR + M D Sbjct: 578 IDKYGADALRYTLITGNAPGNDMRFY-----WSRVEASRNFANKVWN-ASRFIMM--NDP 629 Query: 374 DGMIPT----PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427 D I P T++D+ ILS + +++E+ +NM+ + A+A++ + E D Y Sbjct: 630 DNKIKATDARPANLTDADKWILSKMNGLIKEVTDNMEKYELGIAVAKLNDFIWEEFCDWY 689 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + KP + + + + + +I L LL ++P + +IF Sbjct: 690 IEMVKPRLYNDADETKTAAIWTLKTVLIDALK-LLHPYMPFITEEIF 735 Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust. Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 6/70 (8%) Query: 4 REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57 R+K + + PN + H+GHA + + D++ RF R+ G + L+ GTD K Sbjct: 71 RDKKPFTIVMPPPNITGKLHMGHALDNTMQDIIIRFKRMQGYEALWIPGTDHASISTEVK 130 Query: 58 IAKAAQNAGV 67 + A + G+ Sbjct: 131 VTNALKEEGI 140 >gi|153814976|ref|ZP_01967644.1| hypothetical protein RUMTOR_01191 [Ruminococcus torques ATCC 27756] gi|317501588|ref|ZP_07959782.1| valine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] gi|331088546|ref|ZP_08337459.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] gi|145847544|gb|EDK24462.1| hypothetical protein RUMTOR_01191 [Ruminococcus torques ATCC 27756] gi|316897005|gb|EFV19082.1| valine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] gi|330407808|gb|EGG87302.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] Length = 881 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 79/263 (30%), Positives = 128/263 (48%), Gaps = 17/263 (6%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287 W + +T G+ D + F+P D+ V G DI+ F I + + + P Sbjct: 452 TWFSSALWPFSTLGWPDKTEDLDY-FYPTDVLVTGYDIIFFWVIRMVFSGYEHTGKSPF- 509 Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDG 345 V HG + +G K+SKSLGN IDP+E+I++ G DALR LV A G D FY+ Sbjct: 510 HTVLIHGLVRDSQGRKMSKSLGNGIDPLEIIDKYGADALRLTLVTGNAPGNDMRFYN--- 566 Query: 346 LKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 +RV A + AN + N SR + M + + P+ FT +D ILS + + +++ + Sbjct: 567 --ERVEASRNFANKVWN-ASRFIMMNMDENIIDEPSHDLFTPADRWILSAANTLAKDVTD 623 Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAI 460 NM + A+ +V + + D Y + K K+ P+ A+ L+V V+ Q Sbjct: 624 NMDKFELGIAVQKVYDFIWDEFCDWYVEMAKFRIYHKEEAPEAANCALWVLKTVLAQGLK 683 Query: 461 LLQAFVPKLANKIFDILFVADEN 483 LL F+P + +I+ L +E+ Sbjct: 684 LLHPFMPFITEEIYGALVPEEES 706 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 +R + +T + PN + H+GHA + + D+L R+ R++G + L+ GTD Sbjct: 33 DRSRKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMEGYNALWIPGTD 84 >gi|114567165|ref|YP_754319.1| valyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338100|gb|ABI68948.1| valyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 883 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 83/314 (26%), Positives = 141/314 (44%), Gaps = 49/314 (15%) Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWID 233 ++D +SR+ + WG +IP +DP + ++ W Sbjct: 399 ENIRDWCISRQLW-WGHRIPVWYCQECGEIICSKEDPNHCPNCESAELKQDEDVLDTWFS 457 Query: 234 ALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP 287 + +T G+ PD ++ F+P + V G+DI+ F W A ++ + + +P Sbjct: 458 SALWPFSTLGW---PDKTRDLDFFYPTTVLVTGRDIIFF----WVARMIFSGIEHMGEVP 510 Query: 288 -KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345 V HG IL +G K+SKSL N IDPIEVIE+ G D LR+ L+ + G D + D Sbjct: 511 FYDVNIHGLILDAQGRKMSKSLNNGIDPIEVIEKFGADTLRFSLITGVTPGNDVRFHWDK 570 Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405 ++ N AN I N SR V M ++ ++ + P + +D ILS + E+ + Sbjct: 571 VENTRN--FANKIWN-ASRFVLMNMEGFEAIKPGLEELSLADRWILSRLQLTIAEVTNLL 627 Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463 + A ++ + + D Y + KP + + NP V V +V+ + LL Sbjct: 628 DKYDLGEAARRLYEFIWDEFCDWYIELAKPRLVNQDNPRERLVVQNVLRDVLVDILRLLH 687 Query: 464 AFVPKLANKIFDIL 477 F+P + +I+ L Sbjct: 688 PFMPFITEEIYQFL 701 Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust. Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 23/155 (14%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-------- 68 H+GHA + + D+L R+ R+ G + L+ GTD G ++ +A G+ Sbjct: 55 HLGHALDNTLQDILTRWRRMQGYNALWLPGTDHAGIATQARVEEALAREGLNKYELGREK 114 Query: 69 --------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 ++ ++ ++ M D S + F T ++ R ++ + +KG IY Sbjct: 115 FLERVWEWKHLYGNRITQQLSLMGSSCDWSRERF--TMDEGCSRAVREVFVNLYEKGLIY 172 Query: 121 KGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 +G Y + R +D EV ++ +DG ++ ++ Sbjct: 173 QGDYIINWCPRCHTAISDIEVEHEDSDGHLWHIRY 207 >gi|327292537|ref|XP_003230967.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892] gi|326466904|gb|EGD92357.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892] Length = 599 Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 111/510 (21%), Positives = 203/510 (39%), Gaps = 57/510 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ + N PH+G+ +++ D AR+ R G++ L+ G DE+G A Sbjct: 12 QRNILITSALPFVNNVPHLGNIIGCVLSGDAFARYCRGRGINTLYVGGADEYGTTTEAKA 71 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T + D+ ++ + +IS+D F RTT + + + ++ K+ G + + Sbjct: 72 LADNCTPQELCDKYHAIHAEIYEWFNISFDIFGRTTTQLQTEITQDIFLKLEKNGFLEER 131 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-------------QYYNAQ-----HNP 156 + Y ++ D V Y A G Q N + P Sbjct: 132 MTTQLYCEEHHSFLADRFVEGECPGCGYTDARGDQCDLCGQLLESLQLRNPRCKIDGSTP 191 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 V + + F L Q K+ +++ +S S++K GLK S++R Sbjct: 192 VT-RDTKHIFLELDKLQAKVENFFRDSTTNGSWSNNGAIITASWLKEGLKPRSITRD-IS 249 Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFW--PADLHV---IGKDI 267 WG ++P ++Y W DA Y++ T Y D ++W P D+ + IGKD Sbjct: 250 WGTRVPLSGYEDKVIYSWFDACIGYVSITARYTDQ----WKRWWRNPKDVQLYQFIGKDN 305 Query: 268 LRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324 + FH++ +PA + K + + ++ +KG K SKS G V + D Sbjct: 306 VIFHSVIFPASQIGTEDTWTKLHHLSTTDYLTYKGGKFSKSRGIGVFGDSAQKTGIPADI 365 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 R FL+ D + D N L +GN VSR + + D G Sbjct: 366 WRCFLLSHRPETGDSEFTWDAFVNCNNNLLLKNLGNFVSRVLKFVNSRRDSFATFKGEI- 424 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDR 443 +R+L + + I A + V+ + + + + + L + P + Sbjct: 425 ----------NRLLTQYNRELDAVKIRSAWSTVLQISQQSNGFLQLNRLDNSLAENEPSK 474 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + V+ + + LA L+ ++P AN I Sbjct: 475 CAAVIGIATNTVHLLASLIAPYMPDTANSI 504 >gi|304316504|ref|YP_003851649.1| valyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778006|gb|ADL68565.1| valyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 878 Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 92/315 (29%), Positives = 144/315 (45%), Gaps = 59/315 (18%) Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDP--------------QYIMYVWID 233 + +KD +SR+ + WG +IP DDP + ++ W Sbjct: 396 NNIKDWCISRQLW-WGHRIPAWYCDDCGYVTVSKDDPTCCEQCGSKNIHQDEDVLDTWFS 454 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK----- 288 + +T G+ D+ + K F+P D+ V G DI+ F W A ++ +L K Sbjct: 455 SALWPFSTMGWPDDTEDLKY-FFPTDVLVTGYDIIFF----WVARMIFMSLEFMKEVPFK 509 Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +V HG + +G K+SKSLGN IDP+E+IE+ G D LR+ L+ A G D + D L+ Sbjct: 510 RVLIHGLVRDSQGRKMSKSLGNGIDPLEIIEKYGADTLRFTLITGNAPGNDMRFSDDKLE 569 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 N AN + N SR V + L D + +D+ IL+ + V++E+ EN++ Sbjct: 570 ASRN--FANKLWN-ASRYVMLNLTSDDTTLYLEN-LNIADKWILTRLNNVVKEVTENLEK 625 Query: 408 QLIHRALAQVIS-LVSE-VDRYFDAQKP------WELKKTNPDRASTVLYVTVEVIRQLA 459 + A ++ L SE D Y + KP E KK S + YV +R Sbjct: 626 YELGIAAGKLYDFLWSEFCDWYIELSKPVLYGDDLEAKKKT---KSVLRYVLDNTLR--- 679 Query: 460 ILLQAFVPKLANKIF 474 LL F+P + +IF Sbjct: 680 -LLHPFMPFITEEIF 693 >gi|303239683|ref|ZP_07326208.1| valyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] gi|302592854|gb|EFL62577.1| valyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] Length = 883 Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 85/296 (28%), Positives = 135/296 (45%), Gaps = 31/296 (10%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 +I DP + W + +T G+ + K F+P D+ V G DI+ F W A Sbjct: 444 RIEQDPD-TLDTWFSSALWPFSTLGWPQQTEDLKY-FYPTDVLVTGYDIIFF----WVAR 497 Query: 279 LLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++ + L +K VF HG + +G K+SKSLGN IDP+EVIE+ G DALR+ L Sbjct: 498 MIFSGLEHMEKEPFKYVFIHGIVRDSQGRKMSKSLGNGIDPLEVIEQYGTDALRFALTIG 557 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESIL 391 + G D + + ++ N AN I N SR V M ++ D F +D+ IL Sbjct: 558 TSPGNDLRFSSEKVESSRN--FANKIWN-ASRFVLMNFDENIDFSKVDSTKFNSADKWIL 614 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449 S + + +E+ ENM + AL ++ + E D Y + KP + + R Y Sbjct: 615 SRVNSLTKEVTENMDKFELGIALQKIYEFIWEEFCDWYIELVKPRLYDREDSSRLEA-QY 673 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVAD------------ENRCFQSLDQRL 493 V V+ LL ++P + +I+ L D E CF + ++++ Sbjct: 674 VLNYVLGSAMKLLHPYMPFITEEIYTHLINDDDSIMISKWPQYKEEYCFTAEEEKM 729 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 6/71 (8%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56 ++ K + I PN Q H+GHA + + D+L R+ R+ G L+ GTD Sbjct: 35 DKNKTPYTIVIPPPNITGQLHMGHALDNTLQDILIRWKRMQGFSALWLPGTDHASIATEA 94 Query: 57 KIAKAAQNAGV 67 KI +A G+ Sbjct: 95 KIVEAMAKEGI 105 >gi|331269097|ref|YP_004395589.1| valyl-tRNA synthetase [Clostridium botulinum BKT015925] gi|329125647|gb|AEB75592.1| valyl-tRNA synthetase [Clostridium botulinum BKT015925] Length = 879 Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 18/266 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T GY + + + F+P + V G DI+ F W A ++ + L Sbjct: 450 VLDTWFSSALWPFSTLGYPEKTEDLEY-FYPTNTLVTGYDIIFF----WVARMIFSGLHS 504 Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 KK+ + ++H +G K+SKSLGN +DP+EVIE+ G DALR+ L+ A G D Sbjct: 505 MKKIPFNTVLIHGIVRDSEGRKMSKSLGNGVDPLEVIEKYGADALRFMLITGNAPGNDIR 564 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQ 399 Y ++ ++ N AN I N SR V M L KD +T +D+ ILS + V++ Sbjct: 565 YYEEKVEAARN--FANKIWN-ASRFVMMNLDKDLMDKYKDSKEYTLADKWILSRINTVVK 621 Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 E+ EN++ + A + + D Y + KP L + VL V EV+++ Sbjct: 622 EVTENIEKFEVGIAAQKTYDFMWNEFCDWYIELVKP-VLYGEDEKAKGIVLNVLNEVLKK 680 Query: 458 LAILLQAFVPKLANKIFDILFVADEN 483 LL +P + +I+ L A+E Sbjct: 681 GLKLLHPVMPFITEEIYTNLPNAEET 706 >gi|227486662|ref|ZP_03916978.1| valine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] gi|227235374|gb|EEI85389.1| valine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] Length = 878 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 8/227 (3%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312 F+P D+ + G DI+ F I + + + +P +F+ +G K+SKSLGN +D Sbjct: 471 FFPTDILITGYDIIFFWVIRMVFASLYTTGKVPFSHVLFTGLIRDSQGRKMSKSLGNGVD 530 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 PI+V+ + G DALR+ L+ + G D YD+D L N AN + N SR V M + + Sbjct: 531 PIDVVNKYGADALRFTLITGNSPGNDMRYDEDRLLASRN--FANKLWN-ASRFVLMNIDE 587 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDA 430 D + T D+ IL ++V++++ +N+ I A ++ + D Y + Sbjct: 588 SDDLDFDGKNLTLEDKWILKRLNQVIEDVSKNLDKYEIGMAADRIEDFIWNEYCDWYIEF 647 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L + D + V V + V++ + ILL F+P + +I+ L Sbjct: 648 AKI-RLYGDDEDAKANVKKVLLYVLKSMLILLHPFMPFITEEIYSSL 693 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 24/149 (16%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEH---------GQKIAKAAQN 64 PN Q H+GHA + D++ R+ R+ G + L+ GTD G+ + Sbjct: 42 PNVTGQLHLGHALNNTLQDIVIRYKRMAGFEALWIPGTDHASISTEAKVVGKIAGEGKTK 101 Query: 65 AGVTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113 A + F+ + + R + D +D F T ++ + ++KK+ Sbjct: 102 ADLGRDGFLKEAWDWTHKYGGTIKKQLRTIGVSCDWDHDSF--TMDENLTRAVKRVFKKM 159 Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVY 142 D G IY+G + E +D EVY Sbjct: 160 YDDGLIYRGDRIVNWDPMAETAISDAEVY 188 >gi|164686738|ref|ZP_02210766.1| hypothetical protein CLOBAR_00333 [Clostridium bartlettii DSM 16795] gi|164604128|gb|EDQ97593.1| hypothetical protein CLOBAR_00333 [Clostridium bartlettii DSM 16795] Length = 889 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 80/262 (30%), Positives = 130/262 (49%), Gaps = 19/262 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP-AFLLSANLP 285 ++ W + +T G+ N + + ++P ++ V G DI+ F + A + N Sbjct: 452 VLDTWFSSALWPFSTLGWPHNTEELEY-YYPTNVLVTGYDIIFFWVVRMAFAGMFCMNET 510 Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDK 343 + V HG + +G K+SKSLGN I+P+EVI+E G DALR+ L+ + G D FY Sbjct: 511 PFEHVLIHGLVRDSQGRKMSKSLGNGINPLEVIDEYGADALRFMLITGNSPGNDMRFY-- 568 Query: 344 DGLKKRVNA--DLANGIGNLVSRSVSMILKD--YDGMI--PTPGAFTESDESILSVCSRV 397 +RV A + AN + N SR + M + D +G+ FT +D+ I+S +RV Sbjct: 569 ---FERVEASRNFANKLWN-ASRFIFMNIDDEIMNGVTRESVEANFTLADKWIISRANRV 624 Query: 398 LQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 +E+ ENM + A +V SE D Y + KP L + + T LYV V+ Sbjct: 625 AKEVTENMDKFDLGIAATKVEDFAWSEFCDWYIEIVKP-RLYGEDKEAKQTALYVLTYVL 683 Query: 456 RQLAILLQAFVPKLANKIFDIL 477 ++ LL ++P + +I+ L Sbjct: 684 EKILKLLHPYMPFITEEIYSCL 705 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 PN Q H+GHA + + DVL R+ R+DG + L+ GTD Sbjct: 47 PNITGQLHMGHALDHTLQDVLIRWKRMDGYEALWQPGTD 85 >gi|229825433|ref|ZP_04451502.1| hypothetical protein GCWU000182_00792 [Abiotrophia defectiva ATCC 49176] gi|229789996|gb|EEP26110.1| hypothetical protein GCWU000182_00792 [Abiotrophia defectiva ATCC 49176] Length = 897 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 77/245 (31%), Positives = 122/245 (49%), Gaps = 21/245 (8%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVI 311 F+P D+ V G DI+ F I + AF + P +F HG + G K+SKSLGN I Sbjct: 481 FYPTDVLVTGYDIIFFWVIRMVFSAFEHTGKAPFNTVMF-HGLVRDSLGRKMSKSLGNGI 539 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368 DP+E+I++ G DALR+ L+ A G D FY+ +RV A + AN + N SR + M Sbjct: 540 DPLEIIDKYGADALRFTLITGNAPGNDMRFYN-----ERVEASRNFANKVWN-ASRFIMM 593 Query: 369 ILKDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423 L + +P T +D+ ILS +++ E+ ENM + A+ +V + E Sbjct: 594 NLDAAE--VPANIELSDLTPADKWILSRANKLSAEMTENMDAFELGIAVQKVYDFIWEEF 651 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 D Y + KP T+ +A+ + + +I L LL F+P + +I+ L + N Sbjct: 652 CDWYIEMVKPRLYSDTDKTKAAALFTLKTVLINMLK-LLHPFMPFVTEEIYQALRENEPN 710 Query: 484 RCFQS 488 ++ Sbjct: 711 EAVKA 715 Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 7/65 (10%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73 PN Q H+GHA + + D+L RF R+ G + L+ GTD A A A + K+ Sbjct: 46 PNITGQLHMGHALDNTMQDILIRFKRMQGFEALWQAGTDH-----ASIATEAKIVEKLKE 100 Query: 74 DQNSR 78 + S+ Sbjct: 101 EGTSK 105 >gi|290969030|ref|ZP_06560565.1| valine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] gi|290780986|gb|EFD93579.1| valine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] Length = 886 Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 79/269 (29%), Positives = 123/269 (45%), Gaps = 22/269 (8%) Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279 I DP ++ W + +T G+ KF+P + V G DI+ F W A + Sbjct: 446 ITRDPD-VLDTWFSSALWPFSTQGW-PKKTADIQKFFPTSVLVTGYDIIFF----WVARM 499 Query: 280 L------SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 + ++P K VF HG + G K+SKSLGN IDP+ V EE G DALR+ LV Sbjct: 500 MFMTCEFMKDIPF-KHVFIHGLVRDSLGRKMSKSLGNGIDPLGVCEEYGADALRFTLVTG 558 Query: 333 IACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESI 390 G D FY + + N + AN I N S+ V M L +Y D +P T +D I Sbjct: 559 NTPGNDMRFYME---RVEANRNFANKIWN-ASKFVIMNLTEYDDAFVPEAADLTLADRWI 614 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVL 448 L++ + +Q++ ++ + A V + + + D Y + K T+ T Sbjct: 615 LTMLNETVQKVTRDLDRFELGEAADTVYNFIWNLYCDWYIELTKKRLYTSTDERNRRTAQ 674 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +V V V+ + LL F+P + ++ L Sbjct: 675 FVLVHVLTRTLELLHPFMPFVTEHLWQHL 703 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 13/76 (17%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 E EK S + PN Q H+GHA + + D+L RF R+ G + GTD Sbjct: 35 ENEKEAFSIVMPPPNVTGQLHMGHALDNTLQDILIRFKRMQGYHTAWIPGTD-------- 86 Query: 61 AAQNAGVTTKVFVDQN 76 +AG+ T+V V+Q Sbjct: 87 ---HAGIATQVKVEQQ 99 >gi|225389238|ref|ZP_03758962.1| hypothetical protein CLOSTASPAR_02984 [Clostridium asparagiforme DSM 15981] gi|225044699|gb|EEG54945.1| hypothetical protein CLOSTASPAR_02984 [Clostridium asparagiforme DSM 15981] Length = 880 Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 72/229 (31%), Positives = 114/229 (49%), Gaps = 17/229 (7%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308 F+P D+ V G DI+ ++W ++ + L K H ++H +G K+SKSLG Sbjct: 475 FYPTDVLVTGYDII----LFWVIRMVFSGLEQTGKCPFHTVLIHGLVRDSQGRKMSKSLG 530 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 N IDP+EVI++ G DALR L+ A G D + + ++ N AN + N SR + M Sbjct: 531 NGIDPLEVIDKYGADALRMTLLTGNAPGNDMRFYWERVENSRN--FANKVWN-ASRFIMM 587 Query: 369 -ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425 I K D TP + T +D ILS + + ++ EN+ + AL +V + E D Sbjct: 588 NIEKAPDVSGVTPDSLTMADRWILSKVNTLAGDVTENLDRYELGIALQKVYDFIWEEFCD 647 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 Y + KP + + +A+ V + +I L LL F+P + +IF Sbjct: 648 WYIEMVKPRLYNEDDATKAAAVWTLKTVLINALK-LLHPFMPFITEEIF 695 >gi|229829588|ref|ZP_04455657.1| hypothetical protein GCWU000342_01685 [Shuttleworthia satelles DSM 14600] gi|229791577|gb|EEP27691.1| hypothetical protein GCWU000342_01685 [Shuttleworthia satelles DSM 14600] Length = 888 Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 16/229 (6%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308 F+P D+ V G DI+ F W ++ + L K H ++H +G K+SKSLG Sbjct: 478 FYPTDVLVTGYDIIFF----WVIRMMFSALEQTGKAPFHHVLIHGLVRDDQGRKMSKSLG 533 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 N IDP+E+I+ G DALR L+ A G D + + ++ N AN + N SR + M Sbjct: 534 NGIDPLEIIDRYGADALRLTLITGNAPGNDMRFYIERVENSRN--FANKVWN-ASRFILM 590 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 L P D I S + V++E+ +NM+ + A+ +V + + D Sbjct: 591 NLDGVSLHEPASSELKIEDRWIKSRLNTVVKELTDNMERYELGIAVQKVFDFIWDEFCDW 650 Query: 427 YFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 Y + KP K+ +PD A+ LY V+ + LL F+P + +I+ Sbjct: 651 YIEIVKPRMYHKEQDPDSANAALYTLKGVLAEALKLLHPFMPFITEEIY 699 >gi|166031702|ref|ZP_02234531.1| hypothetical protein DORFOR_01402 [Dorea formicigenerans ATCC 27755] gi|166028679|gb|EDR47436.1| hypothetical protein DORFOR_01402 [Dorea formicigenerans ATCC 27755] Length = 884 Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 70/243 (28%), Positives = 119/243 (48%), Gaps = 16/243 (6%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P ++ V G DI+ F I + + + P V HG + +G K+SKSLGN I Sbjct: 477 FYPTNVLVTGYDIIFFWVIRMVFSGYAHTGKAPF-NTVLIHGLVRDSQGRKMSKSLGNGI 535 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368 DP+++I++ G DALR L+ A G D FY+ +RV A + AN + N SR + M Sbjct: 536 DPLDIIDQYGADALRMTLITGNAPGNDMRFYN-----ERVEASRNFANKVWN-ASRYILM 589 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 ++ + P +D ILS C+ V++++ EN+ + AL+++ + + D Sbjct: 590 NMEGKEITEPQAEDLGPADRWILSACNNVVKDVTENLDKFELGIALSKIYDFIWDEFCDW 649 Query: 427 YFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 Y + K NP A+ L+ +V+ LL ++P + +I+ L +E+ Sbjct: 650 YIELSKYAIYHADENPKSANAALWTLKKVLGDALKLLHPYMPFVTEEIYSKLVPEEESLM 709 Query: 486 FQS 488 S Sbjct: 710 MSS 712 >gi|55981138|ref|YP_144435.1| valyl-tRNA synthetase [Thermus thermophilus HB8] gi|14286172|sp|P96142|SYV_THETH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|66773799|sp|Q5SJ45|SYV_THET8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|12084715|pdb|1GAX|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna Synthetase Complexed With Trna(Val) And Valyl-Adenylate Analogue gi|12084716|pdb|1GAX|B Chain B, Crystal Structure Of Thermus Thermophilus Valyl-Trna Synthetase Complexed With Trna(Val) And Valyl-Adenylate Analogue gi|28948386|pdb|1IVS|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna Synthetase Complexed With Trna(Val) And Valyl-Adenylate Analogue gi|28948387|pdb|1IVS|B Chain B, Crystal Structure Of Thermus Thermophilus Valyl-Trna Synthetase Complexed With Trna(Val) And Valyl-Adenylate Analogue gi|33357071|pdb|1IYW|A Chain A, Preliminary Structure Of Thermus Thermophilus Ligand-Free Valyl-Trna Synthetase gi|33357072|pdb|1IYW|B Chain B, Preliminary Structure Of Thermus Thermophilus Ligand-Free Valyl-Trna Synthetase gi|18844753|dbj|BAB85225.1| valyl-tRNA synthetase [Thermus thermophilus] gi|55772551|dbj|BAD70992.1| valyl-tRNA synthetase (valine--tRNA ligase) (ValRS) [Thermus thermophilus HB8] Length = 862 Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 79/258 (30%), Positives = 120/258 (46%), Gaps = 18/258 (6%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANLPLP 287 W + L+T G+ + + KA F+P D+ V G DIL + + P Sbjct: 455 TWFSSALWPLSTLGWPEETEDLKA-FYPGDVLVTGYDILFLWVSRMEVSGYHFMGERPF- 512 Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 K V HG +L KG+K+SKS GNVIDP+E++E G DALR+ L+ G+D D L Sbjct: 513 KTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVERYGADALRFALIYLATGGQDIRLDLRWL 572 Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 ++A N + + +L +G T +D + S SR ++EI + Sbjct: 573 ------EMARNFANKLYNAARFVLLSREGFQAKEDTPTLADRFMRSRLSRGVEEITALYE 626 Query: 407 NQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 + +A +V LV SE D Y +A KP LK N + L EV+ L LL Sbjct: 627 ALDLAQAAREVYELVWSEFCDWYLEAAKP-ALKAGN----AHTLRTLEEVLAVLLKLLHP 681 Query: 465 FVPKLANKIFDILFVADE 482 +P L ++++ L +E Sbjct: 682 MMPFLTSELYQALTGKEE 699 >gi|297616869|ref|YP_003702028.1| valyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297144706|gb|ADI01463.1| valyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 884 Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 85/325 (26%), Positives = 142/325 (43%), Gaps = 45/325 (13%) Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDAL 235 ++D +SR+ + WG +IP ++PQ ++ W + Sbjct: 401 IRDWCISRQLW-WGHRIPVWYCQDCGQEICAKEEPQRCTNCGQSNLVQDPDVLDTWFSSA 459 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV----- 290 +T G+ P F+P D+ V G+DI+ F W A ++ + L ++V Sbjct: 460 LWPFSTLGW-PAPTSDLEYFYPTDVLVTGRDIIFF----WVARMIFSGLEFMREVPFYDV 514 Query: 291 FSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 HG IL G K+SKSLGN IDPI+VI++ G D LR+ L+ G D + + ++ Sbjct: 515 LIHGLILDALGRKMSKSLGNGIDPIDVIDKYGADTLRFSLITGSTPGNDIRFHWEKVENT 574 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 N AN I N +R V M L D++ + +T +D ILS ++++ E +Q+ Sbjct: 575 RN--FANKIWN-AARFVVMNLDDFEHITLEEKDYTLADRWILSRLQEKIEQVTELLQSYD 631 Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 + A + V + D Y + KP + N V V V+ LL F+P Sbjct: 632 LGEAARVLYDFVWDEFCDWYIELAKPRLYQNANQRDKKVVQNVLHRVLADQMRLLHPFMP 691 Query: 468 KLANKIFDILFVADENRCFQSLDQR 492 + +++ L E+ S Q+ Sbjct: 692 FVTEEVYQHLPRTAESIMVDSWPQK 716 Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 13/69 (18%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA + D+LAR+ R+ G + L+ GTD +AG+ Sbjct: 42 SMVIPPPNVTGSLHLGHALNNTLQDILARWRRMQGYNTLWLPGTD-----------HAGI 90 Query: 68 TTKVFVDQN 76 T+ V+++ Sbjct: 91 ATQARVEES 99 >gi|149184145|ref|ZP_01862472.1| methionine--tRNA ligase [Bacillus sp. SG-1] gi|148848146|gb|EDL62469.1| methionine--tRNA ligase [Bacillus sp. SG-1] Length = 299 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 5/160 (3%) Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 N +GNL++R+V+MI K +DG IP G+ D+ +LSV + + E M+ AL Sbjct: 1 NDLGNLLNRTVAMINKYFDGEIPMYKGSEGPFDKELLSVNKATVAQYEEAMEKMEFSVAL 60 Query: 415 AQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + + L+S ++Y D +PW L K+ D V+ E +R+ A++LQ F+ + KI Sbjct: 61 SSLWQLISRTNKYIDETQPWVLAKEEKKDELGNVMVHLAETLRRAAVMLQPFLTRTPKKI 120 Query: 474 FDILFV-ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510 F L V +E ++SL++ + G + K +PIFPR Sbjct: 121 FQQLNVDQEELTTWESLEEFGMIPAGTQVVKKGEPIFPRL 160 >gi|317418796|emb|CBN80834.1| 'Methionyl-tRNA synthetase, cytoplasmic' [Dicentrarchus labrax] Length = 861 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 17/263 (6%) Query: 227 IMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWPAFLL 280 + YVW DA YL+ T Y D + K+W V + KD + FH++ +P LL Sbjct: 460 VFYVWFDAPIGYLSITANYTDKWE----KWWKNPHQVELYNFMAKDNVPFHSVVFPCSLL 515 Query: 281 SA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFLVREIACGK 337 A N L + + ++ ++ K SKS G V + + D R++L+ G+ Sbjct: 516 GAQDNYTLVNHLVATEYLNYEDTKFSKSRGVGVFGDMAKDTGIPSDVWRFYLLYVRPEGQ 575 Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397 D + + + N++L N +GN ++R+ + K ++G +P + D+ +L++ Sbjct: 576 DSAFSWADMATKNNSELLNNLGNFINRAGMFVTKFFEGCVPAI-ELQQEDKKLLALVGWE 634 Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEV 454 LQ+ + M I AL ++++ ++Y +PW+ K RA TV ++V + Sbjct: 635 LQQYIQLMDKVKIRDALKHILNISRHGNQYIQVNEPWKKIKGGDIERQRAGTVTGLSVNI 694 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 L+++L ++P ++ I D L Sbjct: 695 ACLLSVMLFPYMPTVSQTIRDQL 717 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + L +++A+ Y N PH+G+ ++ ADV +R+ RL G ++LF GTDE+G A Sbjct: 266 KRNLLVTSALPYVNNVPHLGNIIGCVLSADVFSRYGRLRGWNMLFVCGTDEYGTATENKA 325 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR-ILWK 111 + G+T + D+ + I +D F RTT ++ + + I W+ Sbjct: 326 REEGLTPQQICDKYHAIHSSIYKWFQIDFDFFGRTTTEKQTEIAQNIFWR 375 >gi|218296345|ref|ZP_03497088.1| valyl-tRNA synthetase [Thermus aquaticus Y51MC23] gi|218243139|gb|EED09670.1| valyl-tRNA synthetase [Thermus aquaticus Y51MC23] Length = 718 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 18/258 (6%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANLPLP 287 W + L+T G+ + + KA F+P D+ V G DIL + + P Sbjct: 311 TWFSSALWPLSTLGWPEKTEDLKA-FYPGDVLVTGYDILFLWVSRMEVSGYHFMGERPF- 368 Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 K V HG +L KG+K+SKS GNVIDP+E++E G DALR+ L G+D D L Sbjct: 369 KTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVERYGADALRFALTYLATGGQDIRLDLRWL 428 Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 ++A N + + +L +G P A T +D + S +R ++EI + Sbjct: 429 ------EMARNFANKLYNAARFVLLSREGFSPKEDAPTLADRFMKSRLARGVEEITALYE 482 Query: 407 NQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 + +A +V L+ SE D Y +A KP LK N + L E + L LL Sbjct: 483 ALDLAQAAREVYELIWSEFCDWYLEASKP-ALKAGN----AHTLRTLEESLATLLKLLHP 537 Query: 465 FVPKLANKIFDILFVADE 482 +P + ++++ L +E Sbjct: 538 IMPFITSELYQALTGREE 555 >gi|315929371|gb|EFV08576.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305] Length = 82 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/78 (52%), Positives = 52/78 (66%) Query: 8 YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 YI+T I Y N PH+GHAY IIAD LARF+RL G + F TGTDEHGQKI +AA+ Sbjct: 3 YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62 Query: 68 TTKVFVDQNSRNFRDMAD 85 T + + D+ S F+ + D Sbjct: 63 TPQEYADKISFEFKKLWD 80 >gi|253681583|ref|ZP_04862380.1| valine--tRNA ligase [Clostridium botulinum D str. 1873] gi|253561295|gb|EES90747.1| valine--tRNA ligase [Clostridium botulinum D str. 1873] Length = 879 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 80/265 (30%), Positives = 129/265 (48%), Gaps = 18/265 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T GY + + + F+P + V G DI+ F W A ++ + L Sbjct: 450 VLDTWFSSALWPFSTLGYPEKTEDLEY-FYPTNTLVTGYDIIFF----WVARMIFSGLHS 504 Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 KK+ + ++H +G K+SKSLGN +DP+EVIE+ G DALR+ L+ A G D Sbjct: 505 MKKIPFNTVLIHGIVRDSQGRKMSKSLGNGVDPLEVIEKYGADALRFMLITGNAPGNDIR 564 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQ 399 Y ++ ++ N AN I N SR V M L KD +T +D+ ILS + V++ Sbjct: 565 YYEEKVEAARN--FANKIWN-ASRFVMMNLDKDLMDKYKDSKEYTLADKWILSRINTVVK 621 Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 E+ EN+ + A + + D Y + KP L + VL V EV+++ Sbjct: 622 EVTENIDKFEVGIAAQKTYDFMWNEFCDWYIELVKP-VLYGEDEKAKGIVLNVLNEVLKK 680 Query: 458 LAILLQAFVPKLANKIFDILFVADE 482 LL +P + +I+ L A+E Sbjct: 681 GLKLLHPVMPFITEEIYTNLPNAEE 705 >gi|307692585|ref|ZP_07634822.1| valyl-tRNA synthetase [Ruminococcaceae bacterium D16] Length = 876 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 105/401 (26%), Positives = 164/401 (40%), Gaps = 80/401 (19%) Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE---------FILPIER 192 Y G D Y A+ V +EE+GY ++ +Q + + Y H + F+ Sbjct: 313 YSGMD--RYEARKAIVADLEEQGYLVKVEPHQHNVGTCYRCHSDVEPIISAQWFVKMAPL 370 Query: 193 RNEVISFVKSG-------------------LKDLSLSRKTFDWGIKIP----DDPQY--- 226 E I V+ G + D +SR+ + WG +IP DD + Sbjct: 371 AKEAIRVVEEGETKFVPDRFSKTYLNWMENVHDWCISRQLW-WGHQIPVWYCDDCGHMTV 429 Query: 227 ---------------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265 ++ W + +T G+ + + K F+P D+ V G Sbjct: 430 SREDACECEKCHSKNIHRDPDVLDTWFSSALWPFSTLGWPEETEDLKY-FYPTDVLVTGY 488 Query: 266 DILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNVIDPIEVIEE 319 DI+ F W A ++ + K+ VF HG + KG K+SKSLGN IDP+E+ E+ Sbjct: 489 DIIFF----WVARMIFSACEQTKQPPFHTVFIHGLVRDDKGRKMSKSLGNGIDPLEIAEK 544 Query: 320 VGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 G DALR+ LV + G D FY + R + AN I N SR + M L +P Sbjct: 545 YGADALRFNLVTGNSPGNDMRFYTERCEAMR---NFANKIWN-ASRFLMMNLTIDKCELP 600 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436 D+ ILS +R + EI ENM + A ++ + + D Y + K L Sbjct: 601 E--KLELEDKWILSKLNRAIGEITENMDKYELGVAAQKIYDFIWDDYCDWYIELTKT-RL 657 Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + D V V+ + LL F+P + +I+ L Sbjct: 658 QGDDEDSKVRAQQVLCYVLTDMLKLLHPFMPFITEEIWQAL 698 Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 11/77 (14%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ER+ I Q H+GHA + + D+L RF R++G L+ G D Sbjct: 35 ERKPFTIVMPPPNVTGQLHMGHAMDCALQDILIRFKRMEGYAALWVPGMD---------- 84 Query: 63 QNAGVTTKVFVDQNSRN 79 +AG+ T++ V++ R Sbjct: 85 -HAGIATQIKVEEELRT 100 >gi|193794528|gb|ACF21476.1| methionyl-tRNA synthetase [Actinomyces viscosus] Length = 168 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP PG + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GRIPEPGELQDIDRALLDAVEAGFTTVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +PD R +T+L+ +V+ L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPDTQARLATILHTLAQVVADL 166 >gi|154484613|ref|ZP_02027061.1| hypothetical protein EUBVEN_02329 [Eubacterium ventriosum ATCC 27560] gi|149734461|gb|EDM50378.1| hypothetical protein EUBVEN_02329 [Eubacterium ventriosum ATCC 27560] Length = 879 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 106/410 (25%), Positives = 173/410 (42%), Gaps = 77/410 (18%) Query: 130 LRDEAYYNDD-EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE--- 185 L D+A DD Y G D Y A+ V+ +++EGY ++ ++ + + Y H Sbjct: 297 LTDDAKIVDDYPKYAGMD--RYEARKAIVEDLDKEGYLVKIEDHEHNVGTCYRCHTTIEP 354 Query: 186 ------FILPIERRNEVISFVKSG-------------------LKDLSLSRKTFDWGIKI 220 F+ E I VK+G ++D +SR+ + WG +I Sbjct: 355 RVSKQWFVKMEEIAKPAIEAVKNGDTKFVPPHFDKTYFHWLENIRDWCISRQLW-WGHRI 413 Query: 221 P----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252 P DP + W + +T G+ DN + Sbjct: 414 PAFYCDDCGEMVVTKEDHAVCPKCGKEMRQDPD-TLDTWFSSALWPFSTLGWPDNTE-EL 471 Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNV 310 F+P ++ V G DI+ F I L +P V HG + +G K+SKSLGN Sbjct: 472 DYFYPTNVLVTGYDIIFFWVIRMMFSGLEHTGKVPFDTVLIHGLVRDSQGRKMSKSLGNG 531 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVS 367 IDP+EVI++ G DALR+ L+ A G D FY +RV A + AN + N SR + Sbjct: 532 IDPLEVIDKYGADALRFTLITGNAPGNDMRFY-----WERVEASRNFANKVWN-ASRFIQ 585 Query: 368 MILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424 M + + + P T++D+ ILS + + +++ EN+ + A ++ + E Sbjct: 586 MNMPEEGIDVKNKPENLTDADKWILSKVNTLAKDVTENLDKFELGIAADKIYEFIWEEFC 645 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 D Y + KP L + D L+ +V+ LL ++P + +IF Sbjct: 646 DWYIEMVKP-RLYNDDDDTKKAALWTLKKVLIDALKLLHPYMPFITEEIF 694 Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 9/110 (8%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56 +R K + + PN Q H+GHA + + D+L RF R+ G + L+ GTD Sbjct: 32 DRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILTRFKRMQGYEALWLPGTDHASIATEA 91 Query: 57 KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106 KI + + G+T + D F D A Y I + K+ +C Sbjct: 92 KIVEKMREEGITKE---DLGREKFLDRAWQWKAQYGGRIVSQLKKIGSSC 138 >gi|291563752|emb|CBL42568.1| valyl-tRNA synthetase [butyrate-producing bacterium SS3/4] Length = 883 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 80/252 (31%), Positives = 117/252 (46%), Gaps = 15/252 (5%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-K 288 W + +T G+ D K F+P D+ V G DI+ F I L P Sbjct: 455 TWFSSALWPFSTLGWPKETDEMKY-FYPTDVLVTGYDIIFFWVIRMVFSGLEQTGECPFN 513 Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGL 346 V HG + +G K+SKSLGN IDP+EVI++ G DALR L+ A G D FY Sbjct: 514 TVLIHGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRMTLMTGNAPGNDMRFY----- 568 Query: 347 KKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404 +RV A + AN + N SR + M ++ T +D+ ILS + + +E+ EN Sbjct: 569 WERVEASRNFANKVWN-ASRFIMMNIEKAPAGEAKLTDLTAADKWILSKVNDLAKEVTEN 627 Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462 M + AL +V V E D Y + KP + +A+ + + +I L LL Sbjct: 628 MDKYELGIALQKVYDFVWEEFCDWYIEMVKPRLWNDEDRTKAAAIWTLKTVLINSLK-LL 686 Query: 463 QAFVPKLANKIF 474 F+P + +IF Sbjct: 687 HPFMPFITEEIF 698 >gi|307719496|ref|YP_003875028.1| valyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] gi|306533221|gb|ADN02755.1| valyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] Length = 882 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 90/363 (24%), Positives = 156/363 (42%), Gaps = 53/363 (14%) Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 H PV+ E +F R+ K L +E P + N ++++ ++D +SR+ Sbjct: 353 HVPVEPYLSEQWFVRMDTMAQKALKAWEEGKIQFFPRKWENTYTHWLRN-IRDWCISRQL 411 Query: 214 FDWGIKIP--------------DDP--------------QYIMYVWIDALTNYLTTTGYL 245 + WG +IP +DP + ++ W + +T G+ Sbjct: 412 W-WGHRIPVWYCDDCGAQMVLREDPTSCTSCGSTKIRQDEDVLDTWFSSWLWPFSTLGWP 470 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFILHK- 299 + + K +F+P V DI+ F W A ++ A+L +V + G + K Sbjct: 471 EETEDLK-RFFPTTTLVTAYDIIFF----WVARMIMASLEFMHEVPFRDIYITGLVRDKQ 525 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKSLGN IDP+E++EE G DALR+ L A G+D DK+ + V A AN I Sbjct: 526 GRKMSKSLGNGIDPLEIVEEYGADALRFTLAFLAAQGQDVLLDKETFQ--VGAHFANKIW 583 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQ 416 N + IL + +G P E+ D IL ++ ++ +R+ ++ + A Sbjct: 584 N----ASRFILMNLEGRTLIPFEEIETTDVDRWILHRLNQTIRTVRDALETYRFNEAAQT 639 Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 D Y ++ K L + V+ + + V+ Q LL F+P + +++ Sbjct: 640 AYEFFWSDFCDWYIESAKR-SLNGDDEREKDRVVSLLLFVLEQALKLLHPFLPFVTEELY 698 Query: 475 DIL 477 L Sbjct: 699 QKL 701 >gi|147677147|ref|YP_001211362.1| valyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] gi|146273244|dbj|BAF58993.1| valyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] Length = 886 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 74/236 (31%), Positives = 117/236 (49%), Gaps = 22/236 (9%) Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFILHK-GEKISKS 306 A ++P + V G+DI+ F W A ++ + L +P ++VF HG +L G K+SKS Sbjct: 478 AYYYPNSVLVTGRDIIFF----WVARMIFSGLAFMNDVPFREVFIHGLVLDALGRKMSKS 533 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKD---GFYDKDGLKKRVNADLANGIGNLVS 363 LGN +DPI+VIE G D+LR+ L+ G D F DG + + AN + N S Sbjct: 534 LGNGVDPIDVIESHGADSLRFMLITGNTPGNDLRFHFERLDGAR-----NFANKLWN-AS 587 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-S 422 R V M L+D+D PG ++ +D I+S + + ++ + A + + S Sbjct: 588 RFVLMNLEDFDPE-GRPGPYSLADRWIISRLQAAIAGVSRYLEAYELGEAARVLYDFIWS 646 Query: 423 E-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 E D Y + KP KT P+ T +V V++ LL F+P + +I+ L Sbjct: 647 EFCDWYIELAKPRLYGKTTPEDRYTAQHVLSSVLKCTLELLHPFMPFITEEIWQHL 702 >gi|255659387|ref|ZP_05404796.1| valine--tRNA ligase [Mitsuokella multacida DSM 20544] gi|260848348|gb|EEX68355.1| valine--tRNA ligase [Mitsuokella multacida DSM 20544] Length = 892 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 108/230 (46%), Gaps = 16/230 (6%) Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----KVFSHGFIL-HKGEKISKSL 307 +F+P V G DI+ F W A ++ L K VF HG + +G K+SKSL Sbjct: 482 QFYPTATLVTGYDIIFF----WVARMVMMGLEFGKDIPFHHVFIHGLVRDSQGRKMSKSL 537 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN IDP+EVIE+ G D LR+ L+ G D + + ++ N AN I N SR + Sbjct: 538 GNGIDPVEVIEKYGADTLRFMLITGNTPGNDMRFYWERVESARN--FANKIWN-ASRYML 594 Query: 368 MILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424 M + +D P FT +D+ ILS ++ + + +++ N + A + + Sbjct: 595 MNFEGFDKSFKPEAADFTLADKWILSRYAKTAEGVTKSLDNFELGEAGRMIYEFIWNEFC 654 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 D Y + K K N +T LYV V+ LL F+P L +I+ Sbjct: 655 DWYIELTKARLYDKENERAKNTALYVLSYVLEHTLRLLHPFMPFLTEEIW 704 Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN Q H+GHA + + D+L R+HR+ G + ++ G D G IA A+ G Sbjct: 46 SMVIPPPNVTGQLHMGHALDNTLQDILIRYHRMQGYNTVWIPGCDHAG--IATQAKVEGA 103 Query: 68 TTK 70 K Sbjct: 104 LRK 106 >gi|15644561|ref|NP_229614.1| valyl-tRNA synthetase [Thermotoga maritima MSB8] gi|148270232|ref|YP_001244692.1| valyl-tRNA synthetase [Thermotoga petrophila RKU-1] gi|281412433|ref|YP_003346512.1| valyl-tRNA synthetase [Thermotoga naphthophila RKU-10] gi|12585357|sp|Q9X2D7|SYV_THEMA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|4982399|gb|AAD36880.1|AE001819_3 valyl-tRNA synthetase [Thermotoga maritima MSB8] gi|147735776|gb|ABQ47116.1| Isoleucyl-tRNA synthetase [Thermotoga petrophila RKU-1] gi|281373536|gb|ADA67098.1| valyl-tRNA synthetase [Thermotoga naphthophila RKU-10] Length = 865 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 85/269 (31%), Positives = 132/269 (49%), Gaps = 30/269 (11%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP- 285 ++ W + +T G+ + + K +++P DL V G DI+ F W A ++ Sbjct: 447 VLDTWFSSALWPFSTLGWPEETEDLK-RYYPTDLLVTGFDIIFF----WVARMIMMGYEF 501 Query: 286 LPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 + K FSH +I H+ G K+SKSLGN IDP+EVI+E G D +R+ L A G+D Sbjct: 502 MNDKPFSHVYI-HQLVRDKYGRKMSKSLGNGIDPLEVIDEYGADPMRFTLAILAAQGRDI 560 Query: 340 FYDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396 D D KK AN I N +R V M L+DY +P T D+ IL+ ++ Sbjct: 561 KLDPRYFDAYKK-----FANKIWN-ATRFVLMNLEDYKE-VPLENLKT-VDKWILTRLNK 612 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 ++E+ ++N + A + + + D Y +A KP LK + TVL V+V Sbjct: 613 TVEEVTNALENYDFNIAARTIYNFFWDDFCDWYIEASKP-RLKTEERNLVQTVL---VKV 668 Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN 483 + LL F+P L +++ L VA E+ Sbjct: 669 LDASLRLLHPFMPFLTEELWQKLPVAGES 697 Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 23/154 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA----- 62 S I PN + H+GHA + + D++ R+ R+ G DVL+ G D G A Sbjct: 37 SIVIPPPNITGRIHMGHALNITLQDIVVRYKRMKGYDVLWVPGEDHAGIATQNAVEKFLL 96 Query: 63 QNAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCR 107 Q G T T + ++ R R+ L S D+ R T ++ R Sbjct: 97 QTQGKTREEIGREKFLEITWEWANKYRREIREQIKALGASV-DWTRERFTLDEGLSRAVR 155 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 ++ ++ KG IY+G Y + R + +D+EV Sbjct: 156 KVFVELYRKGLIYRGKYIVNWCPRCKTVLSDEEV 189 >gi|170288799|ref|YP_001739037.1| valyl-tRNA synthetase [Thermotoga sp. RQ2] gi|170176302|gb|ACB09354.1| valyl-tRNA synthetase [Thermotoga sp. RQ2] Length = 865 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 85/269 (31%), Positives = 132/269 (49%), Gaps = 30/269 (11%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP- 285 ++ W + +T G+ + + K +++P DL V G DI+ F W A ++ Sbjct: 447 VLDTWFSSALWPFSTLGWPEETEDLK-RYYPTDLLVTGFDIIFF----WVARMIMMGYEF 501 Query: 286 LPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 + K FSH +I H+ G K+SKSLGN IDP+EVI+E G D +R+ L A G+D Sbjct: 502 MNDKPFSHVYI-HQLVRDKYGRKMSKSLGNGIDPLEVIDEYGADPMRFTLAILAAQGRDI 560 Query: 340 FYDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396 D D KK AN I N +R V M L+DY +P T D+ IL+ ++ Sbjct: 561 KLDPRYFDAYKK-----FANKIWN-ATRFVLMNLEDYKE-VPLENLKT-VDKWILTRLNK 612 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 ++E+ ++N + A + + + D Y +A KP LK + TVL V+V Sbjct: 613 TVEEVTNALENYDFNIAARTIYNFFWDDFCDWYIEASKP-RLKTEERNLVQTVL---VKV 668 Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN 483 + LL F+P L +++ L VA E+ Sbjct: 669 LDASLRLLHPFMPFLTEELWQKLPVAGES 697 Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 23/154 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA----- 62 S I PN + H+GHA + + D++ R+ R+ G DVL+ G D G A Sbjct: 37 SIVIPPPNITGRIHMGHALNITLQDIVVRYKRMKGYDVLWVPGEDHAGIATQNAVEKFLL 96 Query: 63 QNAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCR 107 Q G T T + ++ R R+ L S D+ R T ++ R Sbjct: 97 QTQGKTREEIGREKFLEITWEWANKYRREIREQIKALGASV-DWTRERFTLDEGLSRAVR 155 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 ++ ++ KG IY+G Y + R + +D+EV Sbjct: 156 KVFVELYRKGLIYRGKYIVNWCPRCKTVLSDEEV 189 >gi|325849754|ref|ZP_08170901.1| valine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325479983|gb|EGC83063.1| valine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 875 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 80/309 (25%), Positives = 143/309 (46%), Gaps = 41/309 (13%) Query: 202 SGLKDLSLSRKTFDWGIKIP-------------DDPQYIMYV--------------WIDA 234 ++D +SR+ + WG ++P DDP Y+ W + Sbjct: 393 ENIRDWCISRQLW-WGHRLPVFYTEDGEIIVSEDDPDENGYLNGKKVTQEEDTLDTWFSS 451 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFS 292 T G+ + + K F+P D+ V G DI+ F I + + + P +F+ Sbjct: 452 ALWPFATLGWPEETEDYKY-FFPTDILVTGYDIIFFWVIRMVFSSLYNTNKTPFDHVLFT 510 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 +G K+SKSLGN +DPI+V+ + G DALR+ ++ + G D YD +KR+ A Sbjct: 511 GLIRDPQGRKMSKSLGNGVDPIDVVNKYGADALRFTIITGNSPGNDMRYD----EKRIVA 566 Query: 353 --DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410 + AN + N +R V M + + D + + D+ IL + V++E+ +N+ I Sbjct: 567 SRNFANKLWN-ATRFVLMNIDESDDLEFNNLDLSLEDKWILKRLNNVVEEVSKNLDKYEI 625 Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468 A +++ + E D Y + K L ++ ++ STV V + V++ + LL F+P Sbjct: 626 GLAASRIEDFIWEEFCDWYIEFAKE-RLNSSDENKKSTVKKVLLYVLKDMISLLHPFMPF 684 Query: 469 LANKIFDIL 477 + +I+ L Sbjct: 685 ITEEIYKQL 693 Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust. Identities = 48/213 (22%), Positives = 82/213 (38%), Gaps = 49/213 (23%) Query: 4 REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++K + + PN + H+GHA I D++ R+ R+ G + + GTD A Sbjct: 30 KDKKPFTIVMPPPNITGKLHLGHALNNTIQDIIIRYKRMQGYEACWIPGTDH-----ASI 84 Query: 62 AQNAGVTTKVFVDQNSRN-------------------------FRDMADVLDISYDDFIR 96 + A V K+ + S++ R + D D F Sbjct: 85 STEAKVVGKIKSEGKSKDELGRDKFLEECWDWTEEYGGTIKKQLRTVGVSCDWDRDSF-- 142 Query: 97 TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHN 155 T +K R ++KK+ D G IY+G + + +D EVY K +G + + Sbjct: 143 TMDKNLTRAVRKVFKKMYDDGLIYRGNRIVNWDPEAKTALSDAEVYHKDQEGHLWYIK-- 200 Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 YFF S D+ ++ + PE +L Sbjct: 201 ---------YFFEDS---DEFITIATTRPETML 221 >gi|193794312|gb|ACF21368.1| methionyl-tRNA synthetase [Actinomyces naeslundii] Length = 168 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP PG + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPGELQDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P+ R +TVL+ +V+ L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQARLATVLHALAQVVTDL 166 >gi|1814011|emb|CAA71837.1| valyl-tRNA synthetase [Thermus thermophilus] Length = 854 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 18/258 (6%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANLPLP 287 W + L+T G+ + + KA F+P D+ V G DIL + + P Sbjct: 447 TWFSSALWPLSTLGWPEETEDLKA-FYPGDVLVTGYDILFLWVSRMEVSGYHFMGERPF- 504 Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 K V HG +L KG+K+SKS GNVIDP+E++E G DALR+ L+ G+D D L Sbjct: 505 KTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVERYGADALRFALIYLATGGQDIRLDLRWL 564 Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 ++A N + + +L +G T +D + + SR ++EI + Sbjct: 565 ------EMARNFANKLYNAARFVLLSREGFQAKEDTPTLADRFMRTRLSRGVEEITALYE 618 Query: 407 NQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 + +A +V LV SE D Y +A KP LK N + L EV+ L LL Sbjct: 619 ALDLAQAAREVYELVWSEFCDWYLEAAKP-ALKAGN----AHTLRTLEEVLAVLLKLLHP 673 Query: 465 FVPKLANKIFDILFVADE 482 +P L ++++ L +E Sbjct: 674 MMPFLTSELYQALTGKEE 691 >gi|193794316|gb|ACF21370.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794334|gb|ACF21379.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794336|gb|ACF21380.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794344|gb|ACF21384.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794352|gb|ACF21388.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794358|gb|ACF21391.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794366|gb|ACF21395.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794372|gb|ACF21398.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794384|gb|ACF21404.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794386|gb|ACF21405.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794394|gb|ACF21409.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794396|gb|ACF21410.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794398|gb|ACF21411.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794400|gb|ACF21412.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794404|gb|ACF21414.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794416|gb|ACF21420.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794418|gb|ACF21421.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794428|gb|ACF21426.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794446|gb|ACF21435.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794456|gb|ACF21440.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794462|gb|ACF21443.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794466|gb|ACF21445.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794476|gb|ACF21450.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794496|gb|ACF21460.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794498|gb|ACF21461.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794504|gb|ACF21464.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794506|gb|ACF21465.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794518|gb|ACF21471.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794520|gb|ACF21472.1| methionyl-tRNA synthetase [Actinomyces naeslundii] Length = 168 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP PG + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPGELQDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P+ R +TVL+ +V+ L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQARLATVLHTLAQVVTDL 166 >gi|323140721|ref|ZP_08075640.1| valine--tRNA ligase [Phascolarctobacterium sp. YIT 12067] gi|322414739|gb|EFY05539.1| valine--tRNA ligase [Phascolarctobacterium sp. YIT 12067] Length = 911 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 79/259 (30%), Positives = 121/259 (46%), Gaps = 23/259 (8%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP---- 285 W + +T G+ D K +F+P + V G DI+ F W A +L + Sbjct: 483 TWFSSALWPFSTMGWPDKTPLLK-QFYPTSVLVTGYDIIFF----WVARMLIMGMEFMHE 537 Query: 286 LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYD 342 +P KVF HG + +G K+SKSLGN IDP+EVI++ G D LR+ L+ G D FY Sbjct: 538 IPFDKVFIHGLVRDSQGRKMSKSLGNGIDPLEVIDQYGADTLRFMLITGNTPGNDMRFY- 596 Query: 343 KDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 +RV A + AN I N SR M ++ YD +T +D+ ILS + Sbjct: 597 ----WERVEATRNFANKIWN-ASRFALMNMEGYDANAKL-APYTLADKWILSRLQHTAKS 650 Query: 401 IRENMQNQLIHRALAQVISLV-SEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 + E ++ + A + + EV D Y + KP K N + +T +V V+ Sbjct: 651 VTEMLEKFELGEAGRMIYDFIWGEVCDWYIELAKPRLYNKENAEERATAQHVLATVLTSA 710 Query: 459 AILLQAFVPKLANKIFDIL 477 LL ++P + +I+ L Sbjct: 711 MQLLHPYMPFITEEIYQCL 729 Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 E K S I PN Q H+GHA + + D+L R+HR+ G + L+ G D G Sbjct: 62 EEGKDAFSIVIPPPNITGQLHMGHALDNTLQDILIRWHRMMGHNTLWMPGYDHAG 116 >gi|193794452|gb|ACF21438.1| methionyl-tRNA synthetase [Actinomyces naeslundii] Length = 168 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP PG + D ++L + + + AL Sbjct: 61 VAGWGNLVNRAASMIHKRF-GQIPEPGELQDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P+ R +TVL+ +V+ L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQARLATVLHTLAQVVTDL 166 >gi|297624909|ref|YP_003706343.1| valyl-tRNA synthetase [Truepera radiovictrix DSM 17093] gi|297166089|gb|ADI15800.1| valyl-tRNA synthetase [Truepera radiovictrix DSM 17093] Length = 925 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 98/366 (26%), Positives = 159/366 (43%), Gaps = 59/366 (16%) Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 PV+ + +FF++S K+L+ ++ E L ER +V L+D ++SR+ + Sbjct: 359 PVEPILSTQWFFKMSEVAPKVLAALDAG-EMRLTPERYTKVNRDWLLSLRDWNISRQLW- 416 Query: 216 WGIKIPD--DPQYIMYV------------------------------WIDALTNYLTTTG 243 WG +IP DP+ +YV W + +T G Sbjct: 417 WGHQIPAWYDPEGNIYVPDPQNPDLDPPDDPRYAHLTLTQDPDVFDTWFSSNLWPFSTLG 476 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS----HGFILHK 299 + D D KF+P + V G DIL F L++ L +K FS HG +L + Sbjct: 477 WPDTEDPFFKKFFPTSVLVTGYDILFFWVT---KMQLASYALLDQKPFSDIVLHGLVLDE 533 Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 G+K SKS GN IDP++VI E G DALR+ + +D +D + + + N + Sbjct: 534 HGQKQSKSKGNGIDPLDVIAEAGADALRFAMAYASTGAQDIRWDPR--RVEMGRNFGNKL 591 Query: 359 GNLVSRSVSMILKD-----YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 N V R M L D G +P G T I S R +QE+ +++ + A Sbjct: 592 WNAV-RFAMMHLGDPPLPPLQGGVPEAGGLT--SRWITSRLQRAIQEVTRHLEAFDLGGA 648 Query: 414 LAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 V SE D Y +A KP EL+ N + + ++++ LL +P + + Sbjct: 649 SRAAYDFVWSEFCDWYLEAAKP-ELRAGNQETRVVLRRTLTDILK----LLHPLMPFITS 703 Query: 472 KIFDIL 477 ++++ L Sbjct: 704 ELYEAL 709 Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 4/52 (7%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT 68 H+GHA++ + D L RF R+ G + LF GTD G ++ +A Q+ G+T Sbjct: 59 HLGHAFDNTLIDTLIRFKRMRGFEALFQPGTDHAGISTQVQVERALQSEGLT 110 >gi|68165416|gb|AAY87668.1| methionyl-tRNA synthetase [Vibrio cholerae] gi|68165418|gb|AAY87669.1| methionyl-tRNA synthetase [Vibrio cholerae] gi|68165420|gb|AAY87670.1| methionyl-tRNA synthetase [Vibrio cholerae] gi|68165422|gb|AAY87671.1| methionyl-tRNA synthetase [Vibrio cholerae] gi|68165424|gb|AAY87672.1| methionyl-tRNA synthetase [Vibrio cholerae] gi|68165426|gb|AAY87673.1| methionyl-tRNA synthetase [Vibrio cholerae] gi|68165428|gb|AAY87674.1| methionyl-tRNA synthetase [Vibrio cholerae] gi|68165430|gb|AAY87675.1| methionyl-tRNA synthetase [Vibrio cholerae] gi|68165432|gb|AAY87676.1| methionyl-tRNA synthetase [Vibrio cholerae] gi|68165434|gb|AAY87677.1| methionyl-tRNA synthetase [Vibrio cholerae] gi|68165436|gb|AAY87678.1| methionyl-tRNA synthetase [Vibrio cholerae] gi|68165438|gb|AAY87679.1| methionyl-tRNA synthetase [Vibrio cholerae] gi|68165440|gb|AAY87680.1| methionyl-tRNA synthetase [Vibrio cholerae] gi|68165442|gb|AAY87681.1| methionyl-tRNA synthetase [Vibrio cholerae] gi|68165444|gb|AAY87682.1| methionyl-tRNA synthetase [Vibrio cholerae] gi|68165446|gb|AAY87683.1| methionyl-tRNA synthetase [Vibrio cholerae] Length = 269 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 70/263 (26%), Positives = 111/263 (42%), Gaps = 32/263 (12%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ RL G V F D HG I AQ Sbjct: 6 KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 65 Query: 66 GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + ++ S RD A DIS+D++ T + + ++ ++ G I Sbjct: 66 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 124 Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160 S + E + D V KG A G+ Y+ NP + Sbjct: 125 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 183 Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 + E +FF L ++ L + S L E N++ + + GL+ +SR +G Sbjct: 184 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 240 Query: 219 KIPDDPQYIMYVWIDALTNYLTT 241 +IP + YVW+DA Y+ + Sbjct: 241 EIPGEKDKFFYVWLDAPIGYMGS 263 >gi|193794332|gb|ACF21378.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794522|gb|ACF21473.1| methionyl-tRNA synthetase [Actinomyces naeslundii] Length = 168 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP PG + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPGELQDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P+ R +TVL+ +V+ L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQSRLATVLHTLAQVVTDL 166 >gi|291536702|emb|CBL09814.1| valyl-tRNA synthetase [Roseburia intestinalis M50/1] Length = 887 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 77/257 (29%), Positives = 121/257 (47%), Gaps = 17/257 (6%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287 W + +T G+ D + F+P D+ V G DI+ F I + + P Sbjct: 457 TWFSSALWPFSTLGWPDKTEDLDY-FYPTDVLVTGYDIIFFWVIRMIFSGYEQMGKAPFH 515 Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDG 345 +F HG + +G K+SKSLGN IDP+EVI++ G DALR L+ A G D FY Sbjct: 516 TVLF-HGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLITGNAPGNDMRFY---- 570 Query: 346 LKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 +RV A + AN + N SR + M L+ + P+ +D+ ILS + + +++ E Sbjct: 571 -WERVEASRNFANKVWN-ASRFIMMNLEGSEIKEPSLDELKPADKWILSKVNTLAKDVTE 628 Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAI 460 NM + A+ +V + + D Y + K K N P A+ + V+ + Sbjct: 629 NMDKYEMGIAVQKVYDFIWDEFCDWYIEITKTRTYNKENDPASANAAFWTLKTVLTEALK 688 Query: 461 LLQAFVPKLANKIFDIL 477 LL F+P + +IF L Sbjct: 689 LLHPFMPFITEEIFCTL 705 Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 25/133 (18%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +R K + + PN Q H+GHA + + D+L R+ R+ G + L+ GTD Sbjct: 37 DRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILTRYKRMQGYNALWQPGTD-------- 88 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFI-RTTEKRHHDTCRIL--WKKISDKG 117 +A + T+V V +N + + D D+ + F+ + E R RI+ KK+ Sbjct: 89 ---HASIATEVKVIENLK--KQGIDKRDLGREGFLEKCWEWRDEYGSRIINQLKKMGSSA 143 Query: 118 D-------IYKGC 123 D + KGC Sbjct: 144 DWERERFTMDKGC 156 >gi|291537986|emb|CBL11097.1| valyl-tRNA synthetase [Roseburia intestinalis XB6B4] Length = 887 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 77/257 (29%), Positives = 121/257 (47%), Gaps = 17/257 (6%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287 W + +T G+ D + F+P D+ V G DI+ F I + + P Sbjct: 457 TWFSSALWPFSTLGWPDKTEDLDY-FYPTDVLVTGYDIIFFWVIRMIFSGYEQMGKAPFH 515 Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDG 345 +F HG + +G K+SKSLGN IDP+EVI++ G DALR L+ A G D FY Sbjct: 516 TVLF-HGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLITGNAPGNDMRFY---- 570 Query: 346 LKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 +RV A + AN + N SR + M L+ + P+ +D+ ILS + + +++ E Sbjct: 571 -WERVEASRNFANKVWN-ASRFIMMNLEGSEIKEPSLDELKPADKWILSKVNTLAKDVTE 628 Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAI 460 NM + A+ +V + + D Y + K K N P A+ + V+ + Sbjct: 629 NMDKYEMGIAVQKVYDFIWDEFCDWYIEITKTRTYNKENDPASANAAFWTLKTVLTEALK 688 Query: 461 LLQAFVPKLANKIFDIL 477 LL F+P + +IF L Sbjct: 689 LLHPFMPFITEEIFCTL 705 Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 25/133 (18%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +R K + + PN Q H+GHA + + D+L R+ R+ G + L+ GTD Sbjct: 37 DRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILTRYKRMQGYNALWQPGTD-------- 88 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFI-RTTEKRHHDTCRIL--WKKISDKG 117 +A + T+V V +N + + D D+ + F+ + E R RI+ KK+ Sbjct: 89 ---HASIATEVKVIENLK--KQGIDKRDLGREGFLEKCWEWRDEYGSRIINQLKKMGSSA 143 Query: 118 D-------IYKGC 123 D + KGC Sbjct: 144 DWERERFTMDKGC 156 >gi|227431198|ref|ZP_03913252.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352960|gb|EEJ43132.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 894 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 79/265 (29%), Positives = 124/265 (46%), Gaps = 28/265 (10%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280 DP ++ W + +T G+ + DG A+++P + V G DI+ F W A ++ Sbjct: 456 DPD-VLDTWFSSALWPFSTMGWPEKLDGDFARYYPTNTLVTGYDIIFF----WVARMMFQ 510 Query: 281 ----SANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 + P K V HG I +G K+SKSLGN +DP++VIE+ G DALR+FLV Sbjct: 511 GKEFTGQRPF-KNVLIHGLIRDGEGRKMSKSLGNGVDPMDVIEKYGADALRWFLVTGSTP 569 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVC 394 G+D + + + N N I N SR V M L +D +P T +D+ ILS Sbjct: 570 GQDLRFTYEKMDSAWN--FINKIWN-ASRYVIMNLDEDTPSTLPDMSQLTLADQWILSRL 626 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA---STVLY 449 + V+ + N A ++ + + D Y + K E + D+A T+ Y Sbjct: 627 NTVVTNVTRNFDKFEFGEAGRELYNFIWSDFADWYIEMTK--ETLNGDQDKAPVQQTLAY 684 Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474 V + +R LLQ +P + I+ Sbjct: 685 VLDQTLR----LLQPIMPFVTEAIW 705 Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 46 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMD-----------HAGI 94 Query: 68 TTKVFVDQNSR 78 T+ V+Q R Sbjct: 95 ATQAKVEQRLR 105 >gi|291547952|emb|CBL21060.1| valyl-tRNA synthetase [Ruminococcus sp. SR1/5] Length = 884 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 74/237 (31%), Positives = 116/237 (48%), Gaps = 13/237 (5%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P D+ V G DI+ F I + A + P V HG + +G K+SKSLGN I Sbjct: 477 FYPTDVLVTGYDIIFFWVIRMVFSALEQTGETPF-HHVLIHGLVRDSQGRKMSKSLGNGI 535 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 DP+EVI++ G DALR L+ A G D + + ++ N AN I N SR + M L+ Sbjct: 536 DPLEVIDKYGADALRLTLMTGNAPGNDMRFYWERVESSRN--FANKIWN-ASRFIMMNLE 592 Query: 372 DYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428 P A D+ ILS + V++++ ENM + A+ +V + + D Y Sbjct: 593 GKTVTAPEDLNALCNEDKWILSRLNTVIRDVTENMDKYELGIAVQKVYDFLWDELCDWYI 652 Query: 429 DAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 + K W+ ++ NP A+ L+ + Q LL F+P + +I+ L +E+ Sbjct: 653 EMAKVRLWKAEE-NPAAANDALWTLRTALTQGLKLLHPFMPFITEEIYCTLLPEEES 708 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 15/83 (18%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73 PN Q H+GHA + + D+L RF R+ G + L+ GTD +A + T+V V Sbjct: 46 PNVTGQLHMGHALDETMQDILIRFKRMQGYEALWQPGTD-----------HAAIATEVKV 94 Query: 74 DQNSRNFRDMADVLDISYDDFIR 96 + R ++ D +I D+F++ Sbjct: 95 TEKLR--KEGIDKNEIGRDEFMK 115 >gi|116617448|ref|YP_817819.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096295|gb|ABJ61446.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 894 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 79/265 (29%), Positives = 124/265 (46%), Gaps = 28/265 (10%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280 DP ++ W + +T G+ + DG A+++P + V G DI+ F W A ++ Sbjct: 456 DPD-VLDTWFSSALWPFSTMGWPEKLDGDFARYYPTNTLVTGYDIIFF----WVARMMFQ 510 Query: 281 ----SANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 + P K V HG I +G K+SKSLGN +DP++VIE+ G DALR+FLV Sbjct: 511 GKEFTGQRPF-KNVLIHGLIRDGEGRKMSKSLGNGVDPMDVIEKYGADALRWFLVTGSTP 569 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVC 394 G+D + + + N N I N SR V M L +D +P T +D+ ILS Sbjct: 570 GQDLRFTYEKMDSAWN--FINKIWN-ASRYVIMNLDEDTPSTLPDMSQLTLADQWILSRL 626 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA---STVLY 449 + V+ + N A ++ + + D Y + K E + D+A T+ Y Sbjct: 627 NTVVTNVTRNFDKFEFGEAGRELYNFIWSDFADWYIEMTK--ETLNGDQDKAPVQQTLAY 684 Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474 V + +R LLQ +P + I+ Sbjct: 685 VLDQTLR----LLQPIMPFVTEAIW 705 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 46 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMD-----------HAGI 94 Query: 68 TTKVFVDQNSR 78 T+ V+Q R Sbjct: 95 ATQAKVEQRLR 105 >gi|110289055|gb|ABG66070.1| methionyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica Group] Length = 471 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 75/303 (24%), Positives = 143/303 (47%), Gaps = 24/303 (7%) Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255 +++K GLK ++R WG+ +P + + YVW DA Y++ T P+ K Sbjct: 103 AWLKEGLKPRCITRD-LKWGVPVPHEKYKDKVFYVWFDAPIGYISITACY-TPEWEKWWK 160 Query: 256 WPADLHV---IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS---- 306 P ++ + +GKD + FH + +P+ LL N L K + ++ ++ K SK+ Sbjct: 161 NPENVELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKTKGIG 220 Query: 307 -LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 GN + EV RY+L+ D + L+ + N +L N +GN ++R Sbjct: 221 VFGNDAKSTNIPPEV----WRYYLLTNRPEASDTLFTWTDLQAKCNNELLNNLGNFINRV 276 Query: 366 VSMILK----DYDGMIP-TPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 +S I K Y ++P +P + + +S+ +++ + + M I + L ++ Sbjct: 277 LSFIAKPEGTGYGSVVPDSPDVDSHALTQSLAETVGKLIDQYIDAMDKVKIKQGLKIAMA 336 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + SE + Y + W+L K +P +TV+ +V ++ LA LL+ F+P + + L + Sbjct: 337 ISSEGNAYLQESQFWKLYKQDPASCATVMKTSVGIVYLLACLLEPFMPTFSKDVLQQLNL 396 Query: 480 ADE 482 + E Sbjct: 397 SPE 399 >gi|193794502|gb|ACF21463.1| methionyl-tRNA synthetase [Actinomyces naeslundii] Length = 168 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP PG + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPGELQDIDWALLDAVEAGFASVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P+ R +TVL+ +V+ L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQSRLATVLHTLAQVVTDL 166 >gi|294633102|ref|ZP_06711661.1| methionine-tRNA ligase [Streptomyces sp. e14] gi|292830883|gb|EFF89233.1| methionine-tRNA ligase [Streptomyces sp. e14] Length = 213 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 89/201 (44%), Gaps = 25/201 (12%) Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 +E V DA+R++L+RE+ D + + L R +AD A G+GNLV R V+ + + G Sbjct: 24 LELVQADAVRWWLLREVPRTGDADFTAERLIGRADADFAGGLGNLVHRVVTAVHRFRGGA 83 Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436 +P + VC++V + + + RA V ++V E +R DA +PWEL Sbjct: 84 LPV--VEPSGGLPLTEVCAKVPGRVDAALADFDFRRATRAVWTVVEEANRCIDAARPWEL 141 Query: 437 KKTNPD-------RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489 + + R VL V R LA L+ FVP A +I Sbjct: 142 ARREREGDPAAGARLDAVLVALVAACRVLADELRPFVPGAAARI---------------- 185 Query: 490 DQRLKPGFMLHKTFDPIFPRF 510 +RL P T P+FPR Sbjct: 186 AERLTPADGRLPTPRPLFPRL 206 >gi|291303435|ref|YP_003514713.1| valyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] gi|290572655|gb|ADD45620.1| valyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] Length = 874 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 86/325 (26%), Positives = 140/325 (43%), Gaps = 39/325 (12%) Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------------DDP 224 ILP+E+ S+V + L D +SR+ + WG +IP Sbjct: 389 ILPLEQEKRYFSWVDN-LHDWCISRQLW-WGHRIPIWYGPGGEQICVGPGETAPEGYTQD 446 Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSA 282 + ++ W + +T G+ P+ +KA KF+P + V G DI+ F + F L A Sbjct: 447 EDVLDTWFSSALWPFSTMGW---PEQTKALEKFYPTSVLVTGYDIIFFWVVRMMLFGLYA 503 Query: 283 --NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 P K V HG I + G+K+SKS GN +DPIE ++ G DA+R+ L R G D Sbjct: 504 MDGQPPFKDVVLHGLIRDQFGKKMSKSAGNGVDPIEWMDAYGSDAVRFTLARGSNPGADP 563 Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399 +D ++ N N + N +R M +G +P P + D ILS S + Sbjct: 564 AIGEDWVQGSRN--FCNKLWN-ATRFALMSGATTEGPLPQPEQLSTIDRWILSRLSHTVT 620 Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 E+ M+ + +A + + D Y + KP + + A++ V V+ Sbjct: 621 EVDAQMEAYQLGKASDTLYHFAWDEVCDWYLELSKP--VLMAGGEAATSTRRVLGHVLDT 678 Query: 458 LAILLQAFVPKLANKIFDILFVADE 482 L LL P + +++ L +E Sbjct: 679 LLRLLHPMTPYVTEELWLALTGGEE 703 Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 66/165 (40%), Gaps = 31/165 (18%) Query: 5 EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------- 55 +K S I PN H+GHA + I D L R R+ G + L+ G D G Sbjct: 43 DKPAYSIVIPPPNVTGSLHLGHAMDHTIIDTLIRRKRMQGFEALWMPGMDHAGISTQNVV 102 Query: 56 --QKIAKAAQNAGVTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRH 102 Q + + + FVD+ S R + D +D + F T ++ Sbjct: 103 ERQLAEEGLSRHDLGREAFVDRVWQWKSEYGGKISGQMRRLGDSVDWDRERF--TMDEGL 160 Query: 103 HDTCRILWKKISDKGDIYKG------CYSGWYSLRD-EAYYNDDE 140 D + ++KK+ D G IY+ C +L D E ++DD+ Sbjct: 161 SDAVQTIFKKLYDDGLIYRAERIINWCPRCMTALSDIEVNHSDDD 205 >gi|229076690|ref|ZP_04209622.1| Methionine--tRNA ligase [Bacillus cereus Rock4-18] gi|228706432|gb|EEL58673.1| Methionine--tRNA ligase [Bacillus cereus Rock4-18] Length = 671 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 110/541 (20%), Positives = 214/541 (39%), Gaps = 62/541 (11%) Query: 4 REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++K I+ PN H+GH + AD+L R+ +L G +V + +G D+H + A Sbjct: 123 KKKYLITATPPTPNGDLHVGHLSGPYTGADILTRYLKLKGNEVFYMSGADDHQSYVPFKA 182 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH-DTCRILWKKISDKGDIY- 120 + + D + + +I+ D F++ H + + ++K+ ++G + Sbjct: 183 GQLEKSPRETADHFANEIEKTLRLAEINPDIFVKPHFSTFHIEFVKEFFEKLWNEGKLVE 242 Query: 121 --------KGCYSGWYSLRDEAYY--NDDEVYKGADGQYYNAQHNPVQWMEE-------- 162 K C Y EAY N + +DG P ++ Sbjct: 243 KEVDILFCKQCDKHLY----EAYVRGNCPHCDELSDGNACEKCGRPNLCIDLLNPSCKCC 298 Query: 163 ---------EGYFFRLSAYQDKLLSYYES---HPEFILPIERRNEVISFVKSGLKDLSLS 210 + FF LS Y+ +L YY+ P ER + L D+ +S Sbjct: 299 GSEPEKSKIKQLFFPLSNYKTQLKQYYKELKIGPHLTALCER------MLDEDLPDIPIS 352 Query: 211 RKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD----LH 261 + DWGI +P + +YVW + YL+ T L N + + FW ++ Sbjct: 353 HVS-DWGIPVPVEGYENQTIYVWFEMAPGYLSATNELIQDKNLSYTLSDFWNNQDTTIIN 411 Query: 262 VIGKDILRFHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 G D FH++ +PA L S ++ LPK + ++ F +G K S S G+ + E++E Sbjct: 412 FFGYDNGYFHSVLFPAIWLAYSEDITLPKTMITNEFYQLEGLKFSTSRGHAVWGKELLEN 471 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 D +RY+L + + + V+ +L G+ + + ++ P Sbjct: 472 ASHDVVRYYLSYSRPETVETNFTMEEFNHIVDTNLNQEWGSWLHDLKCKLEAEFPNGAPE 531 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPW-ELK 437 + + +R++ EI + N + + ++++ + + + F A + + + Sbjct: 532 LETLSGNYLMYYQHVNRIMNEIMNAYEPNTFSPQKVVRLLNELVRIAKKFSAGEEFLTVL 591 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI-----FDILFVADENRCFQSLDQR 492 K N R +T + + + + LAI +P + F++ DE F Q+ Sbjct: 592 KNNQQRRNTAIALELYTAKILAIFSSPIMPTFGKMLWGDLGFNVDMQLDEEVSFLPAGQK 651 Query: 493 L 493 + Sbjct: 652 V 652 >gi|283796427|ref|ZP_06345580.1| valine--tRNA ligase [Clostridium sp. M62/1] gi|291075837|gb|EFE13201.1| valine--tRNA ligase [Clostridium sp. M62/1] gi|295091426|emb|CBK77533.1| valyl-tRNA synthetase [Clostridium cf. saccharolyticum K10] Length = 883 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 114/231 (49%), Gaps = 22/231 (9%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308 F+P D+ V G DI+ F W ++ + L K H ++H +G K+SKSLG Sbjct: 479 FYPTDVLVTGYDIIFF----WVIRMVFSGLEQTGKEPFHTVLIHGLVRDSQGRKMSKSLG 534 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRS 365 N IDP+EVI++ G DALR L+ A G D FY +RV A + AN + N SR Sbjct: 535 NGIDPLEVIDKYGADALRMTLMTGNAPGNDMRFY-----WERVEASRNFANKVWN-ASRF 588 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423 + M ++ + + T +D ILS + + +++ ENM + AL +V + E Sbjct: 589 IMMNIEKAPKALASLSELTMADRWILSKVNTLAKDVTENMDKYELGIALQKVYDFIWEEF 648 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 D Y + KP + +A+ + + +I+ L LL ++P + +IF Sbjct: 649 CDWYIEMVKPRLYSDEDTTKAAAIWTLKTVLIQSLK-LLHPYMPFITEEIF 698 >gi|255994058|ref|ZP_05427193.1| valine--tRNA ligase [Eubacterium saphenum ATCC 49989] gi|255993726|gb|EEU03815.1| valine--tRNA ligase [Eubacterium saphenum ATCC 49989] Length = 897 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 99/400 (24%), Positives = 172/400 (43%), Gaps = 63/400 (15%) Query: 123 CYSGWYS-LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 C W L DE Y + E + + Y HN V+ + E +F ++ L + Sbjct: 330 CRKRWVKRLDDEGYLVETEDMNISASECYRC-HNTVEPLISEQWFVKMKDLAKPALDAAK 388 Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD------------------- 222 S +P + + ++++ ++D +SR+ + WG +IP Sbjct: 389 SGKLKHIPKKYEKTYLEWLEN-IRDWCISRQLW-WGHRIPAYTCTECGELVVSKEEVCEC 446 Query: 223 --------DPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHA 272 + ++ W + L+T G+ P+ S+ F+P ++ V G DI+ F Sbjct: 447 PSCKGKVVQDEDVLDTWFSSALWPLSTLGW---PEKSEDFDYFYPTNVLVTGYDIIFFWV 503 Query: 273 I--YWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 + + A L LP V+ HG + K G+K+SKSLGN IDP+++I+E G DALR+ L Sbjct: 504 VRMVFTALELDGRLPF-DNVYIHGLVRDKDGQKMSKSLGNGIDPLKIIDEYGADALRFML 562 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFT 384 + I+ G D Y ++ + N AN + N +R + M L G I G Sbjct: 563 LTGISAGSDIRYQEEKIIAARN--FANKLWN-AARFIFMSL----GQIENEGIDIKKIDV 615 Query: 385 ESDESILSVCSRVLQE--------IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPW 434 +++ES+L R + E ++ NM I A ++ L+ D Y + K Sbjct: 616 KNEESLLGTEDRWMIESIHRAMDYMKNNMDKYEIALAGQKIYDLIWNEYCDWYIEVIKGR 675 Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 D+A + V +E + + LL F+P + +I+ Sbjct: 676 IFGSDTADKA-VAISVAIECMANMLKLLHPFMPYITEEIW 714 >gi|76800957|ref|YP_325965.1| isoleucyl-tRNA synthetase [Natronomonas pharaonis DSM 2160] gi|84029523|sp|Q3ITY7|SYI_NATPD RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|76556822|emb|CAI48396.1| isoleucine--tRNA ligase [Natronomonas pharaonis DSM 2160] Length = 1061 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 83/296 (28%), Positives = 144/296 (48%), Gaps = 27/296 (9%) Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254 E + K + DL+++ + ++PD + VW+D+ T GY N D + + Sbjct: 501 ESVDLHKDTVDDLTITADGTTY-TRVPD----VFDVWLDSSVASWGTLGYPGNEDDFE-E 554 Query: 255 FWPADLHVIGKDILRFHAIYWPAFLL-SANLPLP--KKVFSHGFILHK-GEKISKSLGNV 310 WPADL + D R +W + SA L + V HG+ L + G K+SKS+GN+ Sbjct: 555 LWPADLIMEAHDQTR--GWFWSQLGMGSAALGEAPYETVLMHGWALAEDGRKMSKSIGNI 612 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MI 369 + P E I+ G D +R FL+ + G D + D ++ R DL N + N+ + M Sbjct: 613 VAPQEAIDRHGADPMRLFLLTQNPQGDDMRFSWDEMENR-QRDL-NILWNVFRFPLPYMR 670 Query: 370 LKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDR 426 L D+ D + A DE +LS S V E+ ++ +N +AL ++++ +V +V R Sbjct: 671 LDDFDPDAVALDEAALETVDEWVLSRLSTVTAEMTDHWENFRQDKALDELLAFIVEDVSR 730 Query: 427 YFDA---QKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++ ++ WE + + A +T+ +V VE + LL + P +A +I+ L Sbjct: 731 FYIQVVRERMWEEETSESKLAAYATLHHVLVETTK----LLAPYAPFVAEEIYGTL 782 >gi|170016586|ref|YP_001727505.1| valyl-tRNA synthetase [Leuconostoc citreum KM20] gi|169803443|gb|ACA82061.1| Valyl-tRNA synthetase [Leuconostoc citreum KM20] Length = 894 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 81/275 (29%), Positives = 124/275 (45%), Gaps = 30/275 (10%) Query: 217 GIKIPD------DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G + PD DP ++ W + +T G+ +N G AK++P + V G DI+ F Sbjct: 444 GTQAPDGDGWERDPD-VLDTWFSSALWPFSTMGWPENTTGDFAKYYPTNTLVTGYDIIFF 502 Query: 271 HAIYWPAFLL------SANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVD 323 W A ++ + P K V HG I +G K+SKSLGN +DP++VIE+ G D Sbjct: 503 ----WVARMMFQGKEFTGQRPF-KNVLIHGLIRDGEGRKMSKSLGNGVDPMDVIEKYGAD 557 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGA 382 ALR+FL G+D + D + N N I N SR V M L D+ +P Sbjct: 558 ALRWFLATGSTPGQDVRFTYDKMDAAWN--FINKIWN-ASRYVIMNLDDHTPSTLPDLTQ 614 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440 T +D+ ILS + + + N A ++ + + D Y + K + N Sbjct: 615 LTLADKWILSRLNTTIDNVTRNFDKFEFGEAGRELYNFIWSDFADWYIEMTK----ETLN 670 Query: 441 PDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIF 474 D T + T+ V+ Q LLQ +P + I+ Sbjct: 671 GDGDKTPVQQTLAYVLDQTLRLLQPIMPFVTEAIW 705 Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 23/155 (14%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-----TKV 71 H+GHA++ + D++ R ++ G+DVL+ G D G K+ + + GV+ + Sbjct: 59 HLGHAWDTTLQDMIIRQKKMQGMDVLWLPGMDHAGIATQAKVEQRLRAEGVSRYDLGREK 118 Query: 72 FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 FV+Q + + M LD + F T ++ + ++ + +KG IY Sbjct: 119 FVEQVWDWKNEYAATIKQQWGKMGLSLDFDRERF--TLDEGLNKAVNKVFIDLYNKGLIY 176 Query: 121 KGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 +G Y W A + + +Y+ +G +Y+ ++ Sbjct: 177 RGEYIINWDPQARTALSDIEVIYQDDEGAFYHVKY 211 >gi|193794406|gb|ACF21415.1| methionyl-tRNA synthetase [Actinomyces naeslundii] Length = 168 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP PG + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPGELQDIDRALLDAVEAGFVSVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P+ R +TVL+ +V+ L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQARLATVLHTLAQVVTDL 166 >gi|160894055|ref|ZP_02074834.1| hypothetical protein CLOL250_01610 [Clostridium sp. L2-50] gi|156864433|gb|EDO57864.1| hypothetical protein CLOL250_01610 [Clostridium sp. L2-50] Length = 923 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 10/225 (4%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVI 311 F+P D+ V G DI+ F I + A + P K V HG + +G K+SKSLGN I Sbjct: 519 FYPTDVLVTGYDIIFFWVIRMVFSALEQTGKSPF-KHVLIHGLVRDDQGRKMSKSLGNGI 577 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 DP+EVI++ G DALR L+ A G D + + ++ N AN I N SR + M ++ Sbjct: 578 DPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVENSRN--FANKIWN-ASRFIMMNME 634 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429 D T +D ILS + + E+ +NM+ + A+++V + E D Y + Sbjct: 635 KADFSNVKLSDLTIADRWILSKVNDLAVEMTDNMEKYELGIAVSKVYDFIWEEFCDWYIE 694 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 KP + +A+ + + +IR L LL ++P + +IF Sbjct: 695 MVKPRLYNDADETKAAALWTLKTVLIRALK-LLHPYMPFITEEIF 738 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +R K + + PN Q H+GHA + + D+L RF R+ G L+ GTD A Sbjct: 75 DRSKKPFTIVMPPPNVTGQLHMGHALDNTMQDILIRFKRMQGYSALWQPGTDH-----AA 129 Query: 61 AAQNAGVTTKV 71 A VT K+ Sbjct: 130 IATEVKVTEKL 140 >gi|313903077|ref|ZP_07836471.1| valyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] gi|313466579|gb|EFR62099.1| valyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] Length = 929 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 43/276 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F R+ + + S I+P ER V ++D +SR+ + WG +IP Sbjct: 373 WFVRMKPLAEPAMEAVRSGRTRIVP-ERFTRVYLHWLENIRDWCISRQIW-WGHRIPAWY 430 Query: 222 -----------DDP--------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256 +DP + ++ W + +T G+ D +F+ Sbjct: 431 CRQCGETVVAREDPDRCPRCGSDALHQDEDVLDTWFSSALWPFSTLGWPDADSPDLRRFY 490 Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFIL-HKGEKISKSLGNV 310 P + V G DIL +W A ++ L +P + V HG + +G+K+SKS GNV Sbjct: 491 PTSVLVTGYDIL----FFWVARMMVMGLEFMGDVPFRTVLLHGLVRDAQGQKMSKSRGNV 546 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 +DP+EVI++ G DALR+ LV +A G D + + + + + AN + N +R V M L Sbjct: 547 VDPLEVIDKYGADALRFTLVTGLAPGNDARFSWE--RAEASRNFANKLWN-AARFVLMNL 603 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 +D+D P +D IL+ V +++ ++ Sbjct: 604 QDFDPSRGEPRRENAADRWILARLEAVTADVQRLLE 639 Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 21/136 (15%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKI--AKAA 62 S I PN HIGHA + D+LAR+HR+ G L+ GTD G Q + + A Sbjct: 50 SMVIPPPNVTGNLHIGHALNNTMQDILARWHRMQGDVTLWVPGTDHAGIATQHVVEVRLA 109 Query: 63 QNAGVTTK------------VFVDQNSRNFRDMADVLDISYD-DFIR-TTEKRHHDTCRI 108 + G+ + + +Q N L S D D +R T ++ R Sbjct: 110 REEGLRRQDLGRERFLERVWAWKNQYEANILGQLRRLGASVDWDRVRFTMDEGCSRAVRE 169 Query: 109 LWKKISDKGDIYKGCY 124 ++ ++ +KG IY+G Y Sbjct: 170 VFVRLYEKGLIYRGDY 185 >gi|240273433|gb|EER36953.1| methionine-tRNA synthetase [Ajellomyces capsulatus H143] Length = 541 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 102/441 (23%), Positives = 190/441 (43%), Gaps = 43/441 (9%) Query: 43 LDVLFTT--GTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100 L VLF T GTDE+G T + D+ ++ DI +D F RTT Sbjct: 21 LLVLFHTLSGTDEYGTTTEAKGLIEKCTPQELCDKYHAIHAEIYQRFDIGFDIFGRTTTP 80 Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160 D + +++K+ + G + + + Y +E +Y D +G P+Q Sbjct: 81 LQTDITQDIFRKLYNNGFLKERMTTQLYC--EEHHYADA---RGDQCDMCGQLLEPLQLK 135 Query: 161 EE----EGY----------FFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLK 205 +G+ F L Q ++ Y++ + P ++ ++++K GL+ Sbjct: 136 NPRCKIDGFAPITKDTKHIFLELDKLQPEVEDYFQKASTNGAWPNNGKSITLAWLKEGLQ 195 Query: 206 DLSLSRKTFDWGIKIPDDPQY---IMYVWIDALTNYLTTTG-YLDNPDGSKAKFW--PAD 259 S++R WG ++P P Y ++Y W DA Y++ T Y D + K+W P D Sbjct: 196 PRSITRD-MKWGTQVPF-PGYEDKVIYSWFDACIGYVSITAKYTDQWE----KWWRNPED 249 Query: 260 LHV---IGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPI 314 + + IGKD + FH++ +PA + P K + + ++ ++G K SKS G + Sbjct: 250 VQLYQFIGKDNVVFHSVIFPASQIGTRGPWTKVHHLSTTDYLTYEGGKFSKSRGIGVFGD 309 Query: 315 EVIEEVG-VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKD 372 + G D RY+L+ D + D N+ L N +GN SR + + + Sbjct: 310 SAQQTGGSADVWRYYLLSRRPETGDTEFSWDSFISANNSILLNNLGNFASRVLKFVNSRF 369 Query: 373 YDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431 Y+ ++P + E S E+ +R+L + E + + LA + + + + + Sbjct: 370 YNNIVPNWTRYHEPSFETWKEEINRLLTKYVEVLNTVKLRAGLATALHISQQGNLFLQTN 429 Query: 432 KPWE-LKKTNPDRASTVLYVT 451 K + L ++ P + + V+ +T Sbjct: 430 KLNDKLHESEPAKCTAVISLT 450 >gi|239623672|ref|ZP_04666703.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521703|gb|EEQ61569.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 880 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 114/229 (49%), Gaps = 17/229 (7%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308 F+P D+ V G DI+ F W ++ + + K H ++H +G K+SKSLG Sbjct: 475 FYPTDVLVTGYDIIFF----WVIRMVFSGIEQTGKTPFHTVLIHGLVRDSQGRKMSKSLG 530 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 N IDP+EVI++ G DALR L+ A G D + + ++ N AN + N SR + M Sbjct: 531 NGIDPLEVIDKYGADALRMTLITGNAPGNDMRFYWERVENSRN--FANKVWN-ASRFIMM 587 Query: 369 -ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425 I K D + + T +D ILS + + +++ EN+ + AL +V + E D Sbjct: 588 NIGKAPDVTTVSLDSLTMADRWILSKVNTLTKDVTENLDKYELGIALQKVYDFIWEEFCD 647 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 Y + KP + + +A+ + + +I+ L LL F+P L +IF Sbjct: 648 WYIEMVKPRLYNEDDTTKAAAIWTLRTVLIQALK-LLHPFMPFLTEEIF 695 Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 15/99 (15%) Query: 4 REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 R K + + PN Q H+GHA + + D+L R+ R+ G + L+ GTD Sbjct: 33 RSKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYEALWQPGTD--------- 83 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100 +A + T+V V + ++ D D+ D F++ K Sbjct: 84 --HAAIATEVKVIDKLK--KEGIDKADLGRDGFLKECWK 118 >gi|294495458|ref|YP_003541951.1| isoleucyl-tRNA synthetase [Methanohalophilus mahii DSM 5219] gi|292666457|gb|ADE36306.1| Isoleucyl-tRNA synthetase [Methanohalophilus mahii DSM 5219] Length = 1056 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 76/260 (29%), Positives = 125/260 (48%), Gaps = 24/260 (9%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287 VW D+ T Y D K ++WPAD G D R F++ + + P Sbjct: 522 VWFDSAVASWATLNYPHRQDQFK-EWWPADFITEGHDQTRGWFYSQLGASMVAFGQAPY- 579 Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 K V HGF L G+K+SKSLGNV+ P EVIE+ G D+LR +++ A +D +++D L Sbjct: 580 KSVLMHGFTLDSTGKKMSKSLGNVVQPHEVIEKYGADSLRCYVLSSSAPWEDLKFNQDEL 639 Query: 347 KKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAFT-------ESDESILSVCSRVL 398 N + N+ + M L ++D P +F + D ILS V+ Sbjct: 640 ATIHRT--INILWNVYRFPLPYMALDEFD---PQEVSFEAVEPYLRKEDRWILSRMQSVI 694 Query: 399 QEIRENMQNQLIHRALAQVISLVSE-VDRYFDA---QKPWELKKTNPDRASTVLYVTVEV 454 +E+ +M+ L+HRA+ + V E + R++ + W + +PD+ + V V +V Sbjct: 695 EEVDRSMEQYLLHRAIRTINEFVLEDLSRWYIQLIRPRTWN-EADDPDKLA-VYRVLYDV 752 Query: 455 IRQLAILLQAFVPKLANKIF 474 L ++ F+P LA +++ Sbjct: 753 FVTLCKVIAPFMPHLAEEMY 772 >gi|86605229|ref|YP_473992.1| valyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab] gi|86553771|gb|ABC98729.1| valyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab] Length = 912 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 73/283 (25%), Positives = 131/283 (46%), Gaps = 29/283 (10%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 ++ DP ++ W + +T G+ + + K +++P L G DI+ F W A Sbjct: 462 RLERDPD-VLDTWFSSALWPFSTLGWPEETEDFK-RYYPTSLMSTGFDIIFF----WVAR 515 Query: 279 L------LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 + + +P K V+ +G + + G K+SKS GN IDPIE++++ G DALRY LV+ Sbjct: 516 MAMMGVQFTGQIPF-KDVYINGLVRDEHGAKMSKSKGNGIDPIELLDKYGTDALRYALVK 574 Query: 332 E-IACGKD---GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI------PTPG 381 E + G+D + K G V A A N + + +L + +G P P Sbjct: 575 EVVGAGQDIRLAYDRKTGESASVEA--ARNFANKIWNASRFVLLNLEGQTPAQLGSPAPE 632 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439 A +D ILS ++ E ++ + + SL+ + D Y + KP L++ Sbjct: 633 ALELADRWILSRLHSTATQVIEELEAYGLGEGARLLYSLIWDDFCDWYIELVKP-RLRRE 691 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 +P T V V+ + LL ++P + +++ +L A++ Sbjct: 692 DPTSKRTAQQVLASVLETILRLLHPWMPHITEEVWQLLTQANQ 734 >gi|269865281|ref|XP_002651869.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348] gi|220063727|gb|EED42187.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348] Length = 320 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 78/313 (24%), Positives = 140/313 (44%), Gaps = 45/313 (14%) Query: 5 EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +K+++++A+ Y N QPH+G+ ++ ADV +RF R G DV++ +GTDE+G I A+ Sbjct: 10 KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD----- 118 T + V +N +++ D ++ +D F T +HH+ + ++ K D D Sbjct: 70 KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIFLKTIDHFDEKEIN 129 Query: 119 ---------------IYKGCYSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPVQ 158 I C G + D+ Y+ D + + + + + P Q Sbjct: 130 QMFCPKCKQFLADRYIEGECACGATTHGDQCDTCGRYHEDSQ--ELTNFRCSICKTTP-Q 186 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWG 217 + FF L ++L Y+++ R +++K L ++RK WG Sbjct: 187 IKTTKQLFFNL----NELQHYFQTMDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWG 242 Query: 218 IKIP----DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKF-WPAD---LHVIGKDIL 268 + +P DD + YVW DA YL+ L++ G+ F W + +GKD + Sbjct: 243 VPVPLKEYDDK--VFYVWYDAPIGYLSFLQQKLESDQGTSDVFEWLKGSKWVLFMGKDNV 300 Query: 269 RFHAIYWPAFLLS 281 FH+I +P L + Sbjct: 301 PFHSIIFPCILYA 313 >gi|220932295|ref|YP_002509203.1| valyl-tRNA synthetase [Halothermothrix orenii H 168] gi|219993605|gb|ACL70208.1| valyl-tRNA synthetase [Halothermothrix orenii H 168] Length = 882 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 74/268 (27%), Positives = 127/268 (47%), Gaps = 24/268 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D + F+P D+ V G+DI+ F W A ++ L Sbjct: 449 VLDTWFSSALWPFSTMGWPDRTEDLDY-FYPTDVLVTGRDIIFF----WVARMIFMALEF 503 Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 P K V+ HG I G K+SKSLGN IDP+EV+E+ G DALR+ L+ G D Sbjct: 504 MDEPPFKDVYIHGLIRDALGRKMSKSLGNGIDPLEVVEKYGADALRFMLITGNTPGNDMR 563 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSVCS 395 + ++ L+ N AN I N + IL + D + P+ T +D+ +LS Sbjct: 564 FREERLEASRN--FANKIWN----AARFILMNTDDLDPSEIDENDLKLTLADKWMLSRLQ 617 Query: 396 RVLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +V++E+ + + A + + SE D Y + KP + + T Y ++ Sbjct: 618 KVIEEVDKAFEKYYFGEAAKVLYDFIWSEFCDWYIELIKPRLYQDKDVMEKRTAQYTGLK 677 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVAD 481 V+ ++ LL +P + +I+ L +++ Sbjct: 678 VLEKILRLLHPVMPFITEEIWQQLSISN 705 >gi|115402065|ref|XP_001217109.1| methionyl-tRNA synthetase [Aspergillus terreus NIH2624] gi|114188955|gb|EAU30655.1| methionyl-tRNA synthetase [Aspergillus terreus NIH2624] Length = 636 Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 78/305 (25%), Positives = 139/305 (45%), Gaps = 26/305 (8%) Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY---IMYVWIDALTNYLT-TTGY 244 P R S++K GLKD ++R WG+ +P P + ++YVW +A Y + T Y Sbjct: 225 PKNSRVITESWLKEGLKDRGITRD-LKWGVPVPL-PGFENKVLYVWFEACIGYPSITANY 282 Query: 245 LDNPDGSKAKFW---PADLHV---IGKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFI 296 D+ + W P ++ + +GKD + FH++ +P L +N + + + ++ Sbjct: 283 TDD-----WELWWRNPENVQLYQFLGKDNVPFHSVIFPGCQLGSNDKWTMLHHLSTTEYL 337 Query: 297 LHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 ++G K SKS G V V D RYFL++ D ++ N++L Sbjct: 338 NYEGGKFSKSRGIGVFGNNAKQTGVPADVWRYFLLKNRPETGDTQFEWRSFVDSNNSELL 397 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFT--ESDESILSVCSRVLQEIRENMQNQLIHRA 413 +GNLV+R + ++ YD IP FT ES + L + +L++ E M+ + Sbjct: 398 AKLGNLVNRIIKLMAAQYDSTIPE---FTVPESFQPNLDEITGLLRQYIEEMEGVHLRAG 454 Query: 414 LAQVISLVSEVDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 +A + L + A + L P+RA+ V+ + +I LA + ++P + Sbjct: 455 VATAMKLAEAGNGLIQANRLDNALIANEPERAAAVVGTVLNLIYLLASVFYPYLPATSKS 514 Query: 473 IFDIL 477 I + L Sbjct: 515 INEQL 519 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 65/118 (55%), Gaps = 2/118 (1%) Query: 2 KEREK-LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 KE E+ + +++A+ Y N PH+G+ ++ ADV ARFH+ G L+ GTDE+G Sbjct: 10 KEGERNILVTSALPYVNNVPHLGNIVGSVLSADVFARFHKACGHRTLYICGTDEYGTATE 69 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117 A V+ + + ++ +++ + +I +D F RT +H + + L+K++ D G Sbjct: 70 TKALEEKVSPEELCAKYNKIHQEVYEWFEIGFDHFGRTPTPKHTEISQSLFKRLYDNG 127 >gi|46199111|ref|YP_004778.1| valyl-tRNA synthetase [Thermus thermophilus HB27] gi|81405885|sp|Q72JG7|SYV_THET2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|46196735|gb|AAS81151.1| valyl-tRNA synthetase [Thermus thermophilus HB27] Length = 862 Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 78/258 (30%), Positives = 119/258 (46%), Gaps = 18/258 (6%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANLPLP 287 W + L+T G+ + + KA F+P D+ V G DIL + + P Sbjct: 455 TWFSSALWPLSTLGWPEETEDLKA-FYPGDVLVTGYDILFLWVSRMEVSGYHFMGERPF- 512 Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 K V HG +L KG+K+SKS GNVIDP+E++E G DALR+ L G+D D L Sbjct: 513 KTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVERYGADALRFALTYLATGGQDIRLDLRWL 572 Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 ++A N + + +L +G T +D + S S+ ++EI + Sbjct: 573 ------EMARNFANKLYNAARFVLLSREGFQAKEDTPTLADRFMRSRLSQGVEEITALYE 626 Query: 407 NQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 + +A +V LV SE D Y +A KP LK N + L EV+ L LL Sbjct: 627 ALDLAQAAREVYELVWSEFCDWYLEAAKP-ALKAGN----AHTLRTLEEVLAVLLKLLHP 681 Query: 465 FVPKLANKIFDILFVADE 482 +P L ++++ L +E Sbjct: 682 MMPFLTSELYQALTGKEE 699 >gi|298675785|ref|YP_003727535.1| isoleucyl-tRNA synthetase [Methanohalobium evestigatum Z-7303] gi|298288773|gb|ADI74739.1| isoleucyl-tRNA synthetase [Methanohalobium evestigatum Z-7303] Length = 1065 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 76/264 (28%), Positives = 132/264 (50%), Gaps = 26/264 (9%) Query: 230 VWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285 VW D+ T GY P K ++WPAD G D R F++ + + P Sbjct: 523 VWFDSAVASWATLGY---PQSEKDFHRWWPADFITEGHDQTRGWFYSQLGASMVAFEQSP 579 Query: 286 LPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 K V HGF L K G+K+SKS GNV+DP+EV+++ G D LR +++ A D ++ + Sbjct: 580 Y-KSVMMHGFTLDKYGKKMSKSQGNVVDPLEVVDKYGADTLRAYVLSTSAPWDDLKFNWE 638 Query: 345 GLKKRVNADLANGIGNLVSRSVS-MILKDYD----GMIPTPGAFTESDESILSVCSRVLQ 399 G+ + V ++L N + N+ + M+L ++D M + D+ ILS V++ Sbjct: 639 GVNQ-VYSNL-NILWNVYRFPIPYMVLDNFDPKQVSMDSISKHLRKEDKWILSRMQSVIK 696 Query: 400 EIRENMQNQLIHRALAQVISLVSE-VDRYFDA---QKPWELKKTNPDR--ASTVLYVTVE 453 ++ M + +H+A+ + V E + R++ + W ++ +PD+ A VLY + Sbjct: 697 DVDYAMSDYQLHKAIRAINEFVLEDLSRWYIQLIRPRTW-VESEDPDKLAAYRVLY---D 752 Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477 V L+ L+ F P +A +++ L Sbjct: 753 VFVTLSKLIAPFTPHIAEEMYQNL 776 >gi|315924479|ref|ZP_07920700.1| valine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622183|gb|EFV02143.1| valine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263] Length = 880 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 94/372 (25%), Positives = 159/372 (42%), Gaps = 48/372 (12%) Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206 G Y H V+ M E +F + + ++ + +P ER ++ ++D Sbjct: 345 GHCYRC-HTTVETMTSEQWFVDMKPLAEPAIAAVQQSKTRFIP-ERFEKIYFNWMENVRD 402 Query: 207 LSLSRKTFDWGIKIP-----------------------------DDPQYIMYVWIDALTN 237 +SR+ + WG +IP DP ++ W + Sbjct: 403 WCISRQLW-WGHRIPAWTCDDCGELIVAEETPAVCPKCGHTHLTQDPD-VLDTWFSSALW 460 Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFI 296 +T G+ ++ D K KF+P D+ V G DI+ F + A +P V+ HG I Sbjct: 461 PFSTIGWPEDTDDLK-KFYPNDVLVTGYDIIFFWVARMIFMGIDAMGEVPFSDVYIHGLI 519 Query: 297 LH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +G K+SKSLGN IDP+EVIE+ DALR+ ++ + G D + +D ++ N Sbjct: 520 RDAQGRKMSKSLGNGIDPLEVIEDYSADALRFAIITGNSAGNDIRWTQDKIESSRN--FL 577 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N I N SR V M + + + +D+ ILS ++ + E NM+ + A + Sbjct: 578 NKIWN-ASRFVLMNMTEDTDLDVKNVRLELTDKWILSRLNQTIAEATANMEKYELGIAAS 636 Query: 416 QVISLV-SE-VDRYFDAQKPWELKKTNPDRAST---VLYVTVEVIRQLAILLQAFVPKLA 470 ++ SE D Y + KP + N D A + L V++ + LL P + Sbjct: 637 KIYDFTWSEFCDWYIEMVKP----RFNSDDAVSKKAALTTLNYVLQNILKLLHPVTPFIT 692 Query: 471 NKIFDILFVADE 482 +I+ L +D+ Sbjct: 693 EEIYHYLPASDK 704 >gi|291544503|emb|CBL17612.1| valyl-tRNA synthetase [Ruminococcus sp. 18P13] Length = 873 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 72/256 (28%), Positives = 123/256 (48%), Gaps = 18/256 (7%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289 W + +T G+ D+ + F+P V G DI+ F W + ++ A + K+ Sbjct: 451 TWFSSALWPFSTLGWPDHTE-ELDYFYPTSTLVTGYDIITF----WVSRMIVAGMAHMKE 505 Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 V HG + +G K+SKSLGN IDP+EVI++ G DALR+ L A G D Y Sbjct: 506 IPFDTVLIHGLVRDSQGRKMSKSLGNGIDPLEVIDQYGADALRFMLATGNAPGNDMRYMD 565 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 + +K N AN + N SR + M L + + P + T D+ IL+ + + + + E Sbjct: 566 EKVKASRN--FANKLWN-ASRFIMMNLPEDYELTGLPESLTIEDKWILTRFNDLCKAVTE 622 Query: 404 NMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461 N+ + A++++ + +V D Y + KP + ++ V V V++ + L Sbjct: 623 NLDKFELGIAVSKLYDFIWDVYCDWYIELTKPRIMAGGATKESAQA--VLVWVMQGMLKL 680 Query: 462 LQAFVPKLANKIFDIL 477 L F+P + +I+ L Sbjct: 681 LHPFMPFITEEIWQAL 696 Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 24/181 (13%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56 +R K + I PN Q H+GHA + + D+L R+ R+ G L+ GTD Sbjct: 33 DRTKNPYTIVIPPPNITGQLHMGHALDETLQDILIRYRRMQGYCTLWLPGTDHASIATEA 92 Query: 57 KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116 KI +A + G+T D F A Y I K+ +C W++ ++ Sbjct: 93 KIVEAMRKEGITKD---DIGRDGFLKRAWAWKEQYGGRIVEQLKKLGSSCD--WER--ER 145 Query: 117 GDIYKGCYSGWYSLRD--EAYYNDDEVYKG------ADGQYYNAQHNPVQWMEEEGYFFR 168 + +GC ++R+ YY + +Y+G + + + V++ E++G+F+ Sbjct: 146 FTMDEGCNR---AVREVFVRYYEEGLIYRGERIINWCPHCHTSISNAEVEFEEQDGFFWH 202 Query: 169 L 169 L Sbjct: 203 L 203 >gi|227824227|ref|ZP_03989059.1| valyl-tRNA synthetase [Acidaminococcus sp. D21] gi|226904726|gb|EEH90644.1| valyl-tRNA synthetase [Acidaminococcus sp. D21] Length = 885 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 17/256 (6%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289 W + +T G+ D D + +F+P + V G DI+ F W A +++ + K+ Sbjct: 456 TWFSSGLWPFSTFGWPDKTDELQ-QFYPTSVLVTGYDIIFF----WVARMITMGMEFMKE 510 Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 VF HG + +G K+SKSLGN IDP+EV+++ G D LR+ L+ G D + Sbjct: 511 IPFKHVFIHGLVRDEQGRKMSKSLGNGIDPLEVVDKYGADTLRFMLITGNTPGNDMRFYW 570 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 + ++ N AN I N SR M L YD T +D ILS ++++ Sbjct: 571 NRIEATRN--FANKIWN-ASRFALMNLDGYDASAKR-APLTLADRWILSRLQHTIKDVSS 626 Query: 404 NMQNQLIHRALAQVISLV-SEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461 ++ + A + + EV D Y + KP K +P+ ST +V V+ L Sbjct: 627 FLEKFELGEAGRLIYDFIWGEVCDWYIELIKPRLYDKEHPEERSTAQFVLCRVLGDAMKL 686 Query: 462 LQAFVPKLANKIFDIL 477 L ++P + +I+ L Sbjct: 687 LHPYMPFITEEIWQHL 702 >gi|118443167|ref|YP_877806.1| valyl-tRNA synthetase [Clostridium novyi NT] gi|118133623|gb|ABK60667.1| valyl-tRNA synthetase [Clostridium novyi NT] Length = 879 Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 79/266 (29%), Positives = 128/266 (48%), Gaps = 18/266 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T GY + + + F+P + V G DI+ F W A ++ + L Sbjct: 450 VLDTWFSSALWPFSTLGYPEKTEDLEY-FYPTNTLVTGYDIIFF----WVARMIFSGLHS 504 Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 KK+ + ++H +G K+SKSLGN +DP+EVIE+ G DALR+ L+ A G D Sbjct: 505 MKKIPFNTVLIHGIVRDSEGRKMSKSLGNGVDPLEVIEKYGADALRFMLITGNAPGNDIR 564 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQ 399 Y ++ ++ N AN I N SR V M L KD +T +D+ ILS + V++ Sbjct: 565 YYEEKVEAARN--FANKIWN-ASRFVMMNLDKDLMEKYKDCKEYTLADKWILSRINTVVK 621 Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 E EN+ + A ++ + D Y + KP L + VL V EV+++ Sbjct: 622 EATENIDKFELGIAAQKIYDFMWNEFCDWYIELVKP-ALYGDDEKAKGVVLNVLNEVLKK 680 Query: 458 LAILLQAFVPKLANKIFDILFVADEN 483 LL +P + +I+ L +E Sbjct: 681 GLKLLHPVMPFITEEIYTNLPNTEET 706 >gi|193794350|gb|ACF21387.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794354|gb|ACF21389.1| methionyl-tRNA synthetase [Actinomyces naeslundii] gi|193794458|gb|ACF21441.1| methionyl-tRNA synthetase [Actinomyces naeslundii] Length = 168 Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP PG + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPGELQDIDRALLDAVEAGFVFVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P+ R +TVL+ +V+ L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQARLATVLHTLAQVVTDL 166 >gi|304439719|ref|ZP_07399618.1| valine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371794|gb|EFM25401.1| valine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 896 Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 117/233 (50%), Gaps = 19/233 (8%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL------PLPKKVFSHGFILHKGEKISKSLG 308 F+P D+ + G DI+ F W + ++ ++L P +F+ +G K+SKSLG Sbjct: 492 FFPTDVLITGYDIIFF----WVSRMIFSSLEQMGEVPFKDVLFTGLVNDAQGRKMSKSLG 547 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVS 367 N IDP+EVI++ G DALR+ LV + G D FY + + N + AN + N SR V Sbjct: 548 NGIDPLEVIDKYGADALRFTLVTGNSPGNDMRFYYE---RVEANRNFANKLWN-ASRFVL 603 Query: 368 MILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEV 424 M L+D D + AFT+ D+ IL+ + E+ ++ I A ++ + Sbjct: 604 MNLEDSDQEKVLVVNAFTQEDKWILTKLQETIDEVTTHLDKYEIGLAANEIYDFIWNEYC 663 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D Y + KP + +P + + V ++V++ + LL F+P + +I+ L Sbjct: 664 DWYIEMVKPRLYGEDSPSKTAAK-EVLLKVLKDILKLLHPFMPFITEEIYSHL 715 >gi|212697050|ref|ZP_03305178.1| hypothetical protein ANHYDRO_01615 [Anaerococcus hydrogenalis DSM 7454] gi|212675825|gb|EEB35432.1| hypothetical protein ANHYDRO_01615 [Anaerococcus hydrogenalis DSM 7454] Length = 875 Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 66/229 (28%), Positives = 116/229 (50%), Gaps = 12/229 (5%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312 F+P D+ V G DI+ F I + + + P +F+ +G K+SKSLGN +D Sbjct: 471 FFPTDILVTGYDIIFFWVIRMVFSSLYNTNKTPFDHVLFTGLIRDPQGRKMSKSLGNGVD 530 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL 370 PI+V+ + G DALR+ ++ + G D YD +KR+ A + AN + N +R V M + Sbjct: 531 PIDVVNKYGADALRFTIITGNSPGNDMRYD----EKRIVASRNFANKLWN-ATRFVLMNI 585 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428 + D + + D+ IL + V++E+ +N+ I A +++ + E D Y Sbjct: 586 DESDDLEFKDLDLSLEDKWILKRLNNVVEEVSKNLDKYEIGLAASRIEDFIWEEFCDWYI 645 Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + K L + ++ STV V + V++ + LL F+P + +I+ L Sbjct: 646 EFAKE-RLNSDDENKKSTVKKVLLYVLKDMISLLHPFMPFITEEIYKQL 693 Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust. Identities = 48/213 (22%), Positives = 82/213 (38%), Gaps = 49/213 (23%) Query: 4 REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++K + + PN + H+GHA I D++ R+ R+ G + + GTD A Sbjct: 30 KDKKPFTIVMPPPNITGKLHLGHALNNTIQDIIIRYKRMQGYEACWIPGTDH-----ASI 84 Query: 62 AQNAGVTTKVFVDQNSRN-------------------------FRDMADVLDISYDDFIR 96 + A V K+ + S++ R + D D F Sbjct: 85 STEAKVVGKIKSEGKSKDELGRDKFLKECWDWTEEYGGTIKKQLRTVGVSCDWDRDSF-- 142 Query: 97 TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHN 155 T +K R ++KK+ D G IY+G + + +D EVY K +G + + Sbjct: 143 TMDKNLTRAVRKVFKKMYDDGLIYRGNRIVNWDPEAKTALSDAEVYHKDQEGHLWYIK-- 200 Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 YFF S D+ ++ + PE +L Sbjct: 201 ---------YFFEDS---DEYITIATTRPETML 221 >gi|325478556|gb|EGC81668.1| valine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13] Length = 879 Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 85/348 (24%), Positives = 160/348 (45%), Gaps = 46/348 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ + + Y++ ++P ++++ + ++D ++SR+ + WG ++P Sbjct: 357 WFVKMDEFAQMCIDAYDNGEVTLIPDSLSKTYMNWL-NNIRDWTISRQLW-WGHRLPVFY 414 Query: 222 -DDPQYIMY-----------------------VWIDALTNYLTTTGYLDNPDGSKA--KF 255 DD + I+ W + T G+ PD ++ F Sbjct: 415 TDDGEIIVSEDEPDENGMLNGVHVTQEEDTLDTWFSSALWPFATLGW---PDENEEFDYF 471 Query: 256 WPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 +P D+ V G DI+ F I + + ++ +P +F+ +G K+SKSLGN +DP Sbjct: 472 FPTDILVTGYDIIFFWVIRMIFSSMYNTSKVPFHHVLFTGLIRDPQGRKMSKSLGNGVDP 531 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILK 371 I+V+ E G DALR+ L+ + G D YD +KR+ A + AN + N SR V M ++ Sbjct: 532 IDVVNEYGADALRFTLITGNSPGNDMRYD----EKRILASRNFANKLWN-ASRFVLMNIE 586 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFD 429 + D + + D+ IL + V+ ++ +N+ I A ++ + D Y + Sbjct: 587 EGDDLNFSGENLELEDKWILKRLNDVIVDVSKNLDKYEIGLAADRIEDFIWNEYCDWYIE 646 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L + D + V V + V+R++ LL F+P + +IF L Sbjct: 647 FAKI-RLYGEDEDAKANVKKVLLYVLRKMLALLHPFMPFITEEIFAAL 693 Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 22/142 (15%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQN-AGVTTKV 71 H+GHA I D++ R R+ G + L+ GTD KI+K + A + Sbjct: 49 HLGHALNNTIQDIIIRHKRMAGYEALWIPGTDHASISTESKVVDKISKEGKTKADLGRDG 108 Query: 72 FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 F+++ + R + D +D F T + + ++KK+ D G IY Sbjct: 109 FLEEAWDWTHKYGGTIKQQLRTIGVSCDWDHDSF--TMDDNLTKAVKRVFKKMYDDGLIY 166 Query: 121 KGCYSGWYSLRDEAYYNDDEVY 142 +G + + E +D EVY Sbjct: 167 RGNRIVNWDPKAETAISDAEVY 188 >gi|302386726|ref|YP_003822548.1| valyl-tRNA synthetase [Clostridium saccharolyticum WM1] gi|302197354|gb|ADL04925.1| valyl-tRNA synthetase [Clostridium saccharolyticum WM1] Length = 879 Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 73/228 (32%), Positives = 111/228 (48%), Gaps = 16/228 (7%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P D+ V G DI+ F I + + LP V HG + +G K+SKSLGN I Sbjct: 476 FYPTDVLVTGYDIIFFWVIRMVFSGIEQTGKLPF-HTVLIHGLVRDSEGRKMSKSLGNGI 534 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368 DP+EVIE+ G DALR L+ A G D FY +RV A + AN + N SR + M Sbjct: 535 DPLEVIEKYGADALRMTLITGNAPGNDMRFY-----WERVEASRNFANKVWN-ASRFIMM 588 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 ++ T +D+ ILS + + +++ EN+ + AL +V + E D Sbjct: 589 NIEKAPDAKAELKELTIADKWILSKANTLAKDVTENLDKYELGIALQKVYDFIWEEFCDW 648 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 Y + KP + +A+ + + +I L LL ++P L +IF Sbjct: 649 YIEMVKPRLWDDEDKTKAAAIWTLKTVLINSLK-LLHPYMPFLTEEIF 695 >gi|169837555|ref|ZP_02870743.1| methionyl-tRNA synthetase [candidate division TM7 single-cell isolate TM7a] Length = 75 Score = 80.1 bits (196), Expect = 8e-13, Method: Composition-based stats. Identities = 35/63 (55%), Positives = 44/63 (69%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 + YI+T I YPNA PH+G AY II D++AR+ RL G DV F TG DEHGQKI +AA+ Sbjct: 3 KSFYITTPIYYPNAAPHVGTAYTTIICDMVARYKRLTGYDVKFLTGVDEHGQKIQEAAEK 62 Query: 65 AGV 67 + Sbjct: 63 TDI 65 >gi|291296614|ref|YP_003508012.1| valyl-tRNA synthetase [Meiothermus ruber DSM 1279] gi|290471573|gb|ADD28992.1| valyl-tRNA synthetase [Meiothermus ruber DSM 1279] Length = 868 Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 95/370 (25%), Positives = 161/370 (43%), Gaps = 59/370 (15%) Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208 Y + PV+ + E +F R+ +K+L + +P ER +V +KD + Sbjct: 349 YSDRTKAPVEPLLLEQWFVRMKPVAEKVLEGLDKGEMRFVP-ERWEKVNRDWLENIKDWA 407 Query: 209 LSRKTFDWGIKIP----------------------DDPQY----------IMYVWIDALT 236 ++R+ + WG +IP DP+Y + W + Sbjct: 408 IARQLW-WGHQIPAWYDEEGNIYVPDPDNPDLDCDQDPRYAHLKLRRDEDVFDTWFSSAL 466 Query: 237 NYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 +T G+ D PD K++P D+ V G DI+ +W A + + + H Sbjct: 467 WPFSTLGWPDATPD--LKKYYPTDVLVTGYDII----FFWVARMQMSGYQFTGRAPFHTI 520 Query: 296 ILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 +LH KG+K+SKS GN IDP+E+I++ G DA R+ G+D +D+ ++ Sbjct: 521 VLHGLYLDAKGQKMSKSKGNGIDPLELIDKYGADACRFAWDYLATGGQDIRHDERRYEQG 580 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 N AN + N +R V ++ G P T +D ++S +R + EI E + Sbjct: 581 RN--FANKLYN-ATRFV--LMNKQAGRSSAPATPTLADRWMVSRLNRGIAEITEAYEAFD 635 Query: 410 IHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 + RA V LV SE D Y +A KP L++ N L+ + L LL +P Sbjct: 636 LGRAARLVYELVWSEFCDWYLEAAKP-ALREGN----QATLHTLESTLATLLKLLHPIMP 690 Query: 468 KLANKIFDIL 477 + +++++ L Sbjct: 691 FITSELYEAL 700 Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 11/56 (19%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76 H+GHA + I D + RF R+ G + L+ GTD +AG+TT+V V++ Sbjct: 56 HLGHALDNTIIDTIIRFKRMQGYEALYLPGTD-----------HAGITTQVLVERE 100 >gi|193794526|gb|ACF21475.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP PG + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPGELQDIDRALLDAVEAGFASVGDLISQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166 >gi|306819650|ref|ZP_07453313.1| valine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304552295|gb|EFM40223.1| valine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 882 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 81/284 (28%), Positives = 128/284 (45%), Gaps = 33/284 (11%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANL 284 ++ W + ++T GY + + + F+P V G DI+ F I + + ++ Sbjct: 448 VLDTWFSSALWPMSTLGYPEKTEEFE-HFFPTSTLVTGYDIIFFWVIRMVFSSLYITDKS 506 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYD 342 P K VF HG + +G K+SKSLGN IDP+EVI+ G DALR+ L + G D +YD Sbjct: 507 PF-KDVFIHGLVRDSQGRKMSKSLGNGIDPLEVIDSFGADALRFTLATGNSPGNDMRYYD 565 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-----SDESILSVCSRV 397 +RV A + N + S IL + D I E +D+ ILS + V Sbjct: 566 -----ERVTA--SRNFANKIWNSARFILMNLDEGIALSQEEIEKNLEIADKWILSRANSV 618 Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 +E+ ENM + A+ +V D Y + K + LY +V+ Sbjct: 619 AREMTENMDKYELGIAVQKVYDFAWNEFCDWYIEMVKSRLYNYEDKTSKQVALYTLKKVL 678 Query: 456 RQLAILLQAFVPKLANKIFD--------ILFVA-----DENRCF 486 + + LL F+P + +I++ +L VA DEN+ F Sbjct: 679 KDILKLLHPFMPFVTEEIWEKFEDKEEPVLIVAKWVEYDENKNF 722 Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 13/66 (19%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73 PN Q H+GHA + + D+L RF R+ G D L+ GTD +A + T+V V Sbjct: 44 PNITGQLHMGHALDHTLQDILIRFKRMQGYDTLWQPGTD-----------HASIATEVKV 92 Query: 74 DQNSRN 79 + +N Sbjct: 93 VEKIKN 98 >gi|20094860|ref|NP_614707.1| valyl-tRNA synthetase [Methanopyrus kandleri AV19] gi|74559149|sp|Q8TVG5|SYV_METKA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|19888087|gb|AAM02637.1| Valyl-tRNA synthetase [Methanopyrus kandleri AV19] Length = 914 Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 81/263 (30%), Positives = 122/263 (46%), Gaps = 23/263 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILRFHAIYWPA-FLLSANL 284 +M W+D+ L TG+ D PD P DL G DI+R Y L+ A+ Sbjct: 480 VMDTWMDSSITPLVITGWPDEEPD------LPVDLRPQGHDIIRTWLYYTTVRALVHADT 533 Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 K++ +G + + G K+SKS GNV++P EVIEE G DALRY+ V A G D Y Sbjct: 534 EPFKEILINGMVFGEDGYKMSKSRGNVVEPTEVIEEYGADALRYWAVSSGAPGSDVQYMT 593 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 +K+ A I N V R + D + G T +D ILS R++ E+ E Sbjct: 594 KTIKR--GYRFAKKIWN-VCRLAKDHIDDAPSVEEVEGDLTPADRWILSKFHRLVDEVTE 650 Query: 404 NMQNQL-IHRALAQVISLVSE--VDRYFDAQK-----PWELKKTNPDRASTVLYVTVEVI 455 ++++ + A+ + E D Y + K P EL + + + A VL V+ Sbjct: 651 HLESGYRFNDAIKAIEEFAWEELADDYLEMAKLRLYRPEELGEGSREAARAVLR---HVL 707 Query: 456 RQLAILLQAFVPKLANKIFDILF 478 L LL F+P + +++ LF Sbjct: 708 DGLLRLLAPFMPFVTEELYYRLF 730 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 6/110 (5%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AK 60 ++R I T YP + H+GH DV+AR+ R+ G DV F G D HG K Sbjct: 35 EDRPAFVIDTPPPYPTGELHMGHVLNWTYMDVVARYKRMCGYDVFFPQGWDCHGLPTEVK 94 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILW 110 + G+T + D R FR + + +++ ++ + E+ C I W Sbjct: 95 VEEIHGITKR---DAPRREFRKLCE--ELTLENIRKMREQLIQLGCSIDW 139 >gi|68011250|ref|XP_671064.1| tRNA ligase [Plasmodium berghei strain ANKA] gi|56486900|emb|CAH95866.1| tRNA ligase, putative [Plasmodium berghei] Length = 301 Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 9/174 (5%) Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 K W + VIGKDIL+FH I + L S + +P+ + HG I ++ +K+SKSL N+I P Sbjct: 133 KMWNPYIQVIGKDILKFHGILYICLLNSLGIKIPEHILCHGLIKNENKKMSKSLNNIISP 192 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR----VNADLANGIGNLVSRSVSMI 369 ++E+ D +R + + G Y+ K++ L N +GNL+ R VS+ Sbjct: 193 FRLLEKYNKDVIRLYFI-----GSGNIYEDKNFKEKNLESFELFLRNSVGNLLYRIVSLC 247 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 +++ +I F + + L ++ +NM+ L+ L I +++ Sbjct: 248 IENNYNIIKKNDLFNFTILNEFKNTKTYLIKLFDNMEYPLLLEKLMIFIKKINK 301 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 4/68 (5%) Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL- 245 I P + E+I +++ K++ +SR +WGIKIP++ + +YVW +AL +Y+++ Y+ Sbjct: 1 ISPSYLKKEIIHHIQNDFKNICISRYNTEWGIKIPEEEKGTIYVWFEALLSYISSIFYVI 60 Query: 246 ---DNPDG 250 DNP Sbjct: 61 KLYDNPKN 68 >gi|225376843|ref|ZP_03754064.1| hypothetical protein ROSEINA2194_02485 [Roseburia inulinivorans DSM 16841] gi|225211339|gb|EEG93693.1| hypothetical protein ROSEINA2194_02485 [Roseburia inulinivorans DSM 16841] Length = 891 Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 10/229 (4%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P D+ V G DI+ F I + + P +F HG + +G K+SKSLGN I Sbjct: 486 FYPNDVLVTGYDIIFFWVIRMIFSGYEQMGKAPFHTVLF-HGLVRDSQGRKMSKSLGNGI 544 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 DP+EVI++ G DALR L+ A G D + + ++ N AN + N SR + M L+ Sbjct: 545 DPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVESSRN--FANKVWN-ASRFIMMNLE 601 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429 + P +D+ ILS + + +++ ENM + A+ +V + + D Y + Sbjct: 602 GAEIKTPALDELKAADKWILSRVNTLAKDVTENMDKFEMGIAVQKVYDFIWDEFCDWYIE 661 Query: 430 AQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K K N P A+ + V+ + LL F+P + +IF L Sbjct: 662 ITKVRTYNKENDPASANAAFWTLKTVLTEALKLLHPFMPFITEEIFCTL 710 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 44/199 (22%), Positives = 87/199 (43%), Gaps = 30/199 (15%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQ---- 56 +R K + + PN Q H+GHA + + D+L R+ R+ G + L+ GTD H Sbjct: 42 DRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYNALWQPGTD-HASIATE 100 Query: 57 -KIAKAAQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYDDFIRTTE 99 K+ ++ + G+ + + ++ + M D + F T + Sbjct: 101 VKVIQSLKEKGIDKADLGREGFLEKCWEWREEYGNRIINQLKKMGSSADWQRERF--TMD 158 Query: 100 KRHHDTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158 K D + ++ K+ +KG IYKG W + + + + ++ DG +++ + PV Sbjct: 159 KGCSDAVQEVFIKLYEKGYIYKGSRIVNWCPVCKTSISDAEVEHEEQDGFFWHINY-PV- 216 Query: 159 WMEEEGYFFRLSAYQDKLL 177 + EEG F ++ + + L Sbjct: 217 -VGEEGRFVEIATTRPETL 234 >gi|320450562|ref|YP_004202658.1| valyl-tRNA synthetase [Thermus scotoductus SA-01] gi|320150731|gb|ADW22109.1| valyl-tRNA synthetase [Thermus scotoductus SA-01] Length = 891 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 79/267 (29%), Positives = 119/267 (44%), Gaps = 19/267 (7%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANLPLP 287 W + L+T G+ + + KA F+P D+ V G DIL + + P Sbjct: 484 TWFSSALWPLSTLGWPEETEDLKA-FYPGDVLVTGYDILFLWVSRMEVSGYHFRGERPF- 541 Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 K V HG +L KG+K+SKS GNVIDP+E++E G DALR+ L G+D D L Sbjct: 542 KTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVERYGADALRFALTYLTTGGQDIRLDLRWL 601 Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 ++A N + + +L + T +D + S SR + EI + Sbjct: 602 ------EMARNFANKLYNAARFVLLSREAFQAKADEPTLADRFMQSRLSRGVAEITRLYE 655 Query: 407 NQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 + +A +V LV SE D Y +A KP LK N + L E + L LL Sbjct: 656 ALDLAQAAREVYELVWSEFCDWYLEASKP-ALKAGN----AFTLRTLEETLATLLKLLHP 710 Query: 465 FVPKLANKIFDILFVADENRCFQSLDQ 491 +P L ++++ L E F++ Q Sbjct: 711 IMPFLTSELYQAL-TGKEELAFEAWPQ 736 >gi|160939307|ref|ZP_02086658.1| hypothetical protein CLOBOL_04201 [Clostridium bolteae ATCC BAA-613] gi|158438270|gb|EDP16030.1| hypothetical protein CLOBOL_04201 [Clostridium bolteae ATCC BAA-613] Length = 879 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 72/225 (32%), Positives = 108/225 (48%), Gaps = 9/225 (4%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVID 312 F+P D+ V G DI+ F I L LP V HG + +G K+SKSLGN ID Sbjct: 475 FYPTDVLVTGYDIIFFWVIRMVFSGLEQTGKLPFHTVLIHGLVRDSEGRKMSKSLGNGID 534 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM-ILK 371 P+EVI++ G DALR L+ A G D + + ++ N AN + N SR + M I K Sbjct: 535 PLEVIDKYGADALRMTLITGNAPGNDMRFYWERVENSRN--FANKVWN-ASRFIMMNIEK 591 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429 T +D+ I+S + + +E+ EN+ + AL +V + E D Y + Sbjct: 592 AAQSGEVALDRLTMADKWIVSKVNTLTREVTENLDKYELGIALQKVYDFIWEEFCDWYIE 651 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 KP L D + ++ V+ Q LL F+P ++ +IF Sbjct: 652 MVKP-RLYNEEDDTKAAAIWTLKHVLIQALKLLHPFMPFISEEIF 695 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 15/99 (15%) Query: 4 REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 R K + + PN Q H+GHA + + D+L R+ R+ G + L+ GTD Sbjct: 33 RSKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYEALWQPGTD--------- 83 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100 +A + T+V V + ++ D D+ D F++ K Sbjct: 84 --HAAIATEVKVIDKLK--KEGVDKADLGRDGFLKECWK 118 >gi|326692181|ref|ZP_08229186.1| valyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773] Length = 894 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 77/265 (29%), Positives = 123/265 (46%), Gaps = 28/265 (10%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280 DP ++ W + +T G+ ++ G A+++P + V G DI+ F W A ++ Sbjct: 456 DPD-VLDTWFSSALWPFSTMGWPEDTTGDYARYYPTNTLVTGYDIIFF----WVARMMFQ 510 Query: 281 ----SANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 + P K V HG I +G K+SKSLGN +DP++VIE+ G DALR+FL Sbjct: 511 GKEFTGQRPF-KNVLIHGLIRDGEGRKMSKSLGNGVDPMDVIEKYGADALRWFLATGSTP 569 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVC 394 G+D + D + N N I N SR V M L +D +P T +D+ ILS Sbjct: 570 GQDVRFTYDKMDAAWN--FINKIWN-ASRYVIMNLSEDTPSTLPDLDKLTLADQWILSRL 626 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA---STVLY 449 + ++ + N A ++ + + D Y + K E + D+A T+ Y Sbjct: 627 NTTVENVTRNFDKFEFGEAGRELYNFIWSDFADWYIEMTK--ETLNGDGDKAPVQQTLAY 684 Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474 V + +R LLQ +P + I+ Sbjct: 685 VLDQTLR----LLQPIMPFVTEAIW 705 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 23/155 (14%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-----TKV 71 H+GHA++ + D++ R ++ G+DVL+ G D G K+ + + GV+ + Sbjct: 59 HLGHAWDTTLQDMIIRQKKMQGMDVLWLPGMDHAGIATQAKVEQRLRGEGVSRYDLGREK 118 Query: 72 FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 FV+Q + + M LD + F T ++ + ++ + +KG IY Sbjct: 119 FVEQVWDWKNEYAATIKQQWGKMGLSLDFDRERF--TLDEGLNKAVNKVFIDLYNKGLIY 176 Query: 121 KGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 +G Y W A + + +Y+ +G +Y+ ++ Sbjct: 177 RGEYIINWDPQARTALSDIEVIYQDDEGAFYHVKY 211 >gi|291519933|emb|CBK75154.1| valyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4] Length = 848 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 11/235 (4%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P ++ V G DI+ F I + + + P V HG + +G K+SKSLGN I Sbjct: 478 FYPTNVLVTGYDIIFFWVIRMVFSGYAHTGKSPF-NTVLIHGLVRDSQGRKMSKSLGNGI 536 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 DP+E+I++ G DALR L+ A G D FY++ R + AN + N SR + M L Sbjct: 537 DPLEIIDKYGADALRLTLITGNAPGNDMRFYNERVENSR---NFANKVWN-ASRFIMMNL 592 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428 D + P D+ I+S + + +++ ENM + A+ +V + + D Y Sbjct: 593 ADNEVTEPAESELATEDKWIISAVNTLAKDVTENMDKYELGIAVQKVYDFIWDQFCDWYI 652 Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 + KP + L+ + +L F+P + +IF L +E Sbjct: 653 EIVKPRMYSTEYTASKNAALWTAKFALTNALKMLHPFMPFITEEIFCTLQSEEET 707 >gi|116491375|ref|YP_810919.1| valyl-tRNA synthetase [Oenococcus oeni PSU-1] gi|116092100|gb|ABJ57254.1| valyl-tRNA synthetase [Oenococcus oeni PSU-1] Length = 902 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 80/273 (29%), Positives = 121/273 (44%), Gaps = 18/273 (6%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLL 280 DP ++ W + +T G+ D + +F+P V G DI+ F + + A Sbjct: 462 DPD-VLDTWFSSALWPFSTLGWPDTNNSDYKRFYPTSTMVTGYDIIFFWISRMIFQAKEF 520 Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 + P K V HG I KG K+SKSLGN IDP++VI + G DALR+FL G+D Sbjct: 521 TGTRPF-KNVLIHGLIRDSKGRKMSKSLGNGIDPMDVINKYGTDALRWFLSTGSTPGQDL 579 Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVL 398 + D + N N I N VSR V M L+ D +P T +D+ ILS + + Sbjct: 580 NFSNDKMDSAWN--FINKIWN-VSRYVLMNLETDTKIELPDRNLLTLADKWILSRLNSTI 636 Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA---STVLYVTVE 453 + + +N A Q+ + + + D Y + K + N D A V V Sbjct: 637 ENVTKNFDKFEFGEAGRQLYNFIWDDFADWYIEMTK----ETLNDDSALNKRPVQQVLAY 692 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 V+ Q LL +P + I+ L +N+ Sbjct: 693 VLDQTLRLLHPIMPFVTEAIWQQLPQHQDNQSL 725 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D+L R R+ G D L+ G D G K+ + Sbjct: 51 SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEARLR 110 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVD+ + M LD S + F T +K ++ R Sbjct: 111 EDGISRYDLGREKFVDKVWQWKDEYASIIKEQWAKMGLSLDFSRERF--TLDKGLNEAVR 168 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G Y W A + + ++K G +Y+ ++ Sbjct: 169 KVFVDLYKKGLIYRGEYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 216 >gi|118586620|ref|ZP_01544060.1| valine-tRNA ligase [Oenococcus oeni ATCC BAA-1163] gi|118432935|gb|EAV39661.1| valine-tRNA ligase [Oenococcus oeni ATCC BAA-1163] Length = 918 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 80/273 (29%), Positives = 121/273 (44%), Gaps = 18/273 (6%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLL 280 DP ++ W + +T G+ D + +F+P V G DI+ F + + A Sbjct: 478 DPD-VLDTWFSSALWPFSTLGWPDTNNSDYKRFYPTSTMVTGYDIIFFWISRMIFQAKEF 536 Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 + P K V HG I KG K+SKSLGN IDP++VI + G DALR+FL G+D Sbjct: 537 TGTRPF-KNVLIHGLIRDSKGRKMSKSLGNGIDPMDVINKYGTDALRWFLSTGSTPGQDL 595 Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVL 398 + D + N N I N VSR V M L+ D +P T +D+ ILS + + Sbjct: 596 NFSNDKMDSAWN--FINKIWN-VSRYVLMNLETDTKIELPDRNLLTLADKWILSRLNSTI 652 Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA---STVLYVTVE 453 + + +N A Q+ + + + D Y + K + N D A V V Sbjct: 653 ENVTKNFDKFEFGEAGRQLYNFIWDDFADWYIEMTK----ETLNNDSALNKRPVQQVLAY 708 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 V+ Q LL +P + I+ L +N+ Sbjct: 709 VLDQTLRLLHPIMPFVTEAIWQQLPQHQDNQSL 741 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D+L R R+ G D L+ G D G K+ + Sbjct: 67 SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEARLR 126 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVD+ + M LD S + F T +K ++ R Sbjct: 127 EDGISRYDLGREKFVDKVWQWKDEYASIIKEQWAKMGLSLDFSRERF--TLDKGLNEAVR 184 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G Y W A + + ++K G +Y+ ++ Sbjct: 185 KVFVDLYKKGLIYRGEYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 232 >gi|238924929|ref|YP_002938445.1| valyl-tRNA synthetase [Eubacterium rectale ATCC 33656] gi|238876604|gb|ACR76311.1| valyl-tRNA synthetase [Eubacterium rectale ATCC 33656] gi|291527316|emb|CBK92902.1| valyl-tRNA synthetase [Eubacterium rectale M104/1] Length = 882 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 113/232 (48%), Gaps = 16/232 (6%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P D+ V G DI+ F I + + P +F HG + +G K+SKSLGN I Sbjct: 477 FYPNDVLVTGYDIIFFWVIRMIFSGYEQMGKAPFHTVLF-HGLVRDSQGRKMSKSLGNGI 535 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368 DP+EVI++ G DALR L+ A G D FY +RV A + AN + N SR + M Sbjct: 536 DPLEVIDKYGADALRLTLITGNAPGNDMRFY-----WERVEASRNFANKVWN-ASRFIMM 589 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 L+ + P +D+ ILS + + ++ ENM + A+ +V + + D Sbjct: 590 NLEGVELREPKLDELHAADKWILSRVNTLAKDATENMDKFELGIAVQKVYDFIWDEFCDW 649 Query: 427 YFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y + K KK NP+ A+ L+ V+ LL ++P + +IF L Sbjct: 650 YIEIAKVRTYKKDENPESANAALWTLKTVLVNALKLLHPYMPFITEEIFCTL 701 Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust. Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 28/198 (14%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56 +R K + + PN Q H+GHA + + D+L R+ R+ G + L+ GTD Sbjct: 33 DRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYNALWQPGTDHASIATEV 92 Query: 57 KIAKAAQNAGV-----TTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEK 100 K+ +A + G+ T + F+++ + R + D + F T ++ Sbjct: 93 KVIQALKEQGINKADLTREEFLEKCWDWRKEYGGRIVKQLRKLGSSADWQRERF--TMDE 150 Query: 101 RHHDTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159 + ++ K+ KG IYKG W + + + + ++ DG +++ + PV Sbjct: 151 GCSHAVQEVFTKLYKKGWIYKGSRIVNWCPVCKTSISDAEVEHEEQDGFFWHINY-PV-- 207 Query: 160 MEEEGYFFRLSAYQDKLL 177 + EEG F ++ + + L Sbjct: 208 VGEEGRFVEIATTRPETL 225 >gi|291525950|emb|CBK91537.1| valyl-tRNA synthetase [Eubacterium rectale DSM 17629] Length = 882 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 113/232 (48%), Gaps = 16/232 (6%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P D+ V G DI+ F I + + P +F HG + +G K+SKSLGN I Sbjct: 477 FYPNDVLVTGYDIIFFWVIRMIFSGYEQMGKAPFHTVLF-HGLVRDSQGRKMSKSLGNGI 535 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368 DP+EVI++ G DALR L+ A G D FY +RV A + AN + N SR + M Sbjct: 536 DPLEVIDKYGADALRLTLITGNAPGNDMRFY-----WERVEASRNFANKVWN-ASRFIMM 589 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 L+ + P +D+ ILS + + ++ ENM + A+ +V + + D Sbjct: 590 NLEGVELREPKLDELHAADKWILSRVNTLAKDATENMDKFELGIAVQKVYDFIWDEFCDW 649 Query: 427 YFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y + K KK NP+ A+ L+ V+ LL ++P + +IF L Sbjct: 650 YIEIAKVRTYKKDENPESANAALWTLKTVLVNALKLLHPYMPFITEEIFCTL 701 Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust. Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 28/198 (14%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56 +R K + + PN Q H+GHA + + D+L R+ R+ G + L+ GTD Sbjct: 33 DRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYNALWQPGTDHASIATEV 92 Query: 57 KIAKAAQNAGV-----TTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEK 100 K+ +A + G+ T + F+++ + R + D + F T ++ Sbjct: 93 KVIQALKEQGINKADLTREEFLEKCWDWRKEYGGRIVKQLRKLGSSADWQRERF--TMDE 150 Query: 101 RHHDTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159 + ++ K+ KG IYKG W + + + + ++ DG +++ + PV Sbjct: 151 GCSHAVQEVFTKLYKKGWIYKGSRIVNWCPVCKTSISDAEVEHEEQDGFFWHINY-PV-- 207 Query: 160 MEEEGYFFRLSAYQDKLL 177 + EEG F ++ + + L Sbjct: 208 VGEEGRFVEIATTRPETL 225 >gi|16332082|ref|NP_442810.1| valyl-tRNA synthetase [Synechocystis sp. PCC 6803] gi|2501067|sp|Q55522|SYV_SYNY3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|1001391|dbj|BAA10881.1| valyl-tRNA synthetase [Synechocystis sp. PCC 6803] Length = 910 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 75/285 (26%), Positives = 131/285 (45%), Gaps = 28/285 (9%) Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277 +++ DP ++ W + +T G+ + D AK++P V G DI+ F W A Sbjct: 455 VQLQQDPD-VLDTWFSSGLWPFSTMGWPEQTD-DLAKYYPTSTLVTGFDIIFF----WVA 508 Query: 278 FL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 + + +P K V+ HG + G+K+SKS N IDP+ +I + G DALRY L+ Sbjct: 509 RMTMMAGHFTGQIPF-KDVYIHGLVRDENGKKMSKSANNGIDPLLLINKYGTDALRYTLI 567 Query: 331 REIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAF 383 RE+A G+D D K + + + + N + + ++ + DG P PG Sbjct: 568 REVAGAGQDISLQYDRQKDESESVEASRNFANKLWNAARFVMMNLDGQTPQQLGLAPGED 627 Query: 384 TE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440 E +D ILS ++V+Q+ RE +++ + A + + D Y + KP K Sbjct: 628 LELADRWILSRLNQVIQQTREQIEDYGLGEAAKGLYEFIWGDFCDWYIELAKPRLWNKEG 687 Query: 441 PDRASTVLYVTVEVIRQ----LAILLQAFVPKLANKIFDILFVAD 481 D + V +V+ + LL F+P + +++ L A+ Sbjct: 688 GDVGTQRQLVARQVLAHTLDSIIKLLHPFMPHITEELWQTLHQAE 732 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 15/32 (46%), Positives = 22/32 (68%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 H+GHA+E + D L R+HR+ G + L+ GTD Sbjct: 53 HMGHAFESSLIDTLVRYHRMRGDNTLWLPGTD 84 >gi|193794432|gb|ACF21428.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P + D ++L + E + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPAELQDIDRALLDAVEAGFASVGEFIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166 >gi|154499847|ref|ZP_02037885.1| hypothetical protein BACCAP_03504 [Bacteroides capillosus ATCC 29799] gi|150271445|gb|EDM98702.1| hypothetical protein BACCAP_03504 [Bacteroides capillosus ATCC 29799] Length = 896 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 121/269 (44%), Gaps = 23/269 (8%) Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277 IK DD ++ W + +T G+ D F+P D+ V G DI+ F W A Sbjct: 445 IKQEDD---VLDTWFSSALWPFSTLGWPDENSEDYKYFYPTDVLVTGYDIIFF----WVA 497 Query: 278 FLLSANL-----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 ++ + P VF HG + KG K+SKSLGN IDP+E+ E+ G DALR+ LV Sbjct: 498 RMIFSACEHTGKPPFHTVFIHGLVRDDKGRKMSKSLGNGIDPLEIAEKYGADALRFNLVT 557 Query: 332 EIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 + G D FY + R + AN I N SR + M L +P D I Sbjct: 558 GNSPGNDMRFYTERCEAMR---NFANKIWN-ASRFLMMNLTIDKCELPE--KLEMEDRWI 611 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVL 448 LS + ++ E+ ENM + A ++ + S D Y + K L+ + + Sbjct: 612 LSKLNSLIPEMTENMDKYELGVAAQKIYDFIWDSYCDWYIELTKA-RLQGDDEEAKVNAQ 670 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V V+ Q+ LL F+P + +I+ L Sbjct: 671 KVLCYVLTQILKLLHPFMPFITEEIWQAL 699 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 14/82 (17%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73 PN Q H+GHA + + D+L RF R++G L+ GTD +AG+ T++ V Sbjct: 46 PNVTGQLHMGHAMDSTLQDILIRFKRMEGYAALWVPGTD-----------HAGIATQIKV 94 Query: 74 DQNSRNFRDMADVLDISYDDFI 95 ++ R + D+ D F+ Sbjct: 95 EEELRKNEGLTR-YDLGRDKFL 115 >gi|270666769|ref|ZP_06222445.1| methionine--tRNA ligase [Haemophilus influenzae HK1212] gi|270316829|gb|EFA28560.1| methionine--tRNA ligase [Haemophilus influenzae HK1212] Length = 148 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 7/148 (4%) Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHAI 273 IP YVW+DA Y+ + L + +G +FW A+L H IGKDI+ FH++ Sbjct: 1 IPGAKDKFFYVWLDAPIGYMASFKNLCDREGIDFNEFWAEGSDAELYHFIGKDIVYFHSL 60 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +WPA L + P VF+HG++ G K+SKS G I + + + LRY+ ++ Sbjct: 61 FWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAKL 120 Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGN 360 +D ++ D +RVN D+ N + N Sbjct: 121 NDRIEDLDFNLDDFVQRVNTDIVNKLVN 148 >gi|302507468|ref|XP_003015695.1| hypothetical protein ARB_06006 [Arthroderma benhamiae CBS 112371] gi|291179263|gb|EFE35050.1| hypothetical protein ARB_06006 [Arthroderma benhamiae CBS 112371] Length = 710 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 115/515 (22%), Positives = 210/515 (40%), Gaps = 59/515 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + + I++A+ + N PH+G+ II + D + GTDE+G A Sbjct: 114 QRNILITSALPFVNNVPHLGN----IIGGRGINTLYVGAPDYQLSLGTDEYGTTTEAKAL 169 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 T + D+ ++ + +IS+D F RTT + + + ++ K+ G + + Sbjct: 170 AENCTPQELCDKYHAIHAEIYEWFNISFDIFGRTTTQLQTEITQDIFLKLEKNGFLEERM 229 Query: 124 YSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHNPV----QWMEE---------------- 162 + Y ++ D V + D Y NA+ + Q +E Sbjct: 230 TTQLYCEEHHSFLADRFVEGECPDCGYANARGDQCDLCGQLLESLQLRNPRCKIDGSTPV 289 Query: 163 ----EGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217 + F L Q K+ ++++ S S++K GLK S++R WG Sbjct: 290 TRDTKHIFLELDKLQTKVENFFQDSTANGSWSNNGAVITTSWLKEGLKPRSITRD-ISWG 348 Query: 218 IKIPDDPQY---IMYVWIDALTNYLTTTG-YLDNPDGSKAKFW--PADLHV---IGKDIL 268 ++P P Y ++Y W DA Y++ T Y D + ++W P D+ + IGKD + Sbjct: 349 TRVPL-PGYEDKVIYSWFDACIGYVSITARYTDQWE----RWWRSPKDVQLYQFIGKDNV 403 Query: 269 RFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDAL 325 FH++ +PA + K + + ++ ++G K SKS G V + D Sbjct: 404 VFHSVIFPASQIGTEDTWTKLHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQKTGIPTDIW 463 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPT----- 379 R FL+ D + D L N L +GN VSR + + + Y+ ++P Sbjct: 464 RCFLLSHRPETGDSEFTWDALVNCNNNLLLKNLGNFVSRVLKFVNSRHYNNIVPNWTQYY 523 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKK 438 G+F E I +R+L + + I A + V+ + + + + + L K Sbjct: 524 EGSFATFKEEI----NRLLAQYIRELDAVKIRSAWSTVLQISQQGNGFLQLNRLDNSLAK 579 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 P + + V+ + + LA L+ ++P AN I Sbjct: 580 NEPSKCAAVIGIATNTVHLLASLVAPYMPDTANSI 614 >gi|193794348|gb|ACF21386.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P + D ++L + E + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAVEAGFASVGEFIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166 >gi|163813949|ref|ZP_02205343.1| hypothetical protein COPEUT_00102 [Coprococcus eutactus ATCC 27759] gi|158450819|gb|EDP27814.1| hypothetical protein COPEUT_00102 [Coprococcus eutactus ATCC 27759] Length = 920 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 10/225 (4%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVI 311 F+P + V G DI+ F I + A + P K V HG + +G K+SKSLGN I Sbjct: 516 FYPTSVLVTGYDIIFFWVIRMVFSALEQTGKSPF-KHVLIHGLVRDDQGRKMSKSLGNGI 574 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 DP+EVI++ G DALR L+ A G D + + ++ N AN I N +R + M ++ Sbjct: 575 DPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVENSRN--FANKIWN-ATRFIMMNME 631 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429 D T +D ILS + + +E+ +NM+ + A+++V + E D Y + Sbjct: 632 KADFSAVKLSDLTIADRWILSKVNTLAKEMTDNMEKFELGIAVSKVYDFIWEEFCDWYIE 691 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 KP L + + L+ V+ Q LL ++P + +IF Sbjct: 692 MVKP-RLYNDEDETKAAALWTLKTVLIQALKLLHPYMPFITEEIF 735 Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust. Identities = 42/198 (21%), Positives = 83/198 (41%), Gaps = 28/198 (14%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56 +R K + + PN Q H+GHA + + D+L RF R+ G L+ GTD Sbjct: 72 DRSKKPFTIVMPPPNVTGQLHMGHALDNTMQDILIRFKRMQGYSALWQPGTDHAAIATEV 131 Query: 57 KIAKAAQNAGVTTK----------------VFVDQNSRNFRDMADVLDISYDDFIRTTEK 100 K+ + + G+ K + ++ + M D + F T ++ Sbjct: 132 KVTEKLKEQGIDKKEIGREEFLKHAWAWKEEYGNRIVSQLKKMGSSADWDRERF--TMDE 189 Query: 101 RHHDTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159 + ++ ++ DKG IYKG W + + + + +++ DG +++ + PV Sbjct: 190 GCSRAVKEVFVRLYDKGYIYKGSRIINWCPVCKTSISDAEVIHEEQDGYFWHINY-PV-- 246 Query: 160 MEEEGYFFRLSAYQDKLL 177 + E G F ++ + + L Sbjct: 247 VGEPGRFVEIATTRPETL 264 >gi|331002328|ref|ZP_08325846.1| valyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] gi|330410144|gb|EGG89578.1| valyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] Length = 880 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 73/252 (28%), Positives = 120/252 (47%), Gaps = 15/252 (5%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287 W + +T G+ DN + F+P D+ V G DI+ F + + + + P Sbjct: 452 TWFSSALWPFSTLGWPDNTE-EMDYFYPTDVLVTGYDIIFFWVVRMVFSGYEQTGKTPF- 509 Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 V HG + +G K+SKSLGN IDP+EVI++ G DALR L+ A G D + + + Sbjct: 510 HTVLIHGLVRDSEGRKMSKSLGNGIDPLEVIDKYGADALRMMLMTGNAPGNDMRFYYERV 569 Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 + N AN I N +R + M + + SD+ ILS +R+++E+ N+ Sbjct: 570 ESARN--FANKIWN-AARLIMMNIGESKPEAIDSSKLMISDKWILSKSNRLVKEVTTNLD 626 Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILL 462 + ALA++ E D Y + K W + + D A +VL + +I + LL Sbjct: 627 KYELGIALAKIYDFAWEEFCDWYIEMVKVRLWNKEDESRDTALSVLTYVLNIILK---LL 683 Query: 463 QAFVPKLANKIF 474 F+P + +I+ Sbjct: 684 HPFMPFITEEIY 695 >gi|315651962|ref|ZP_07904964.1| valine--tRNA ligase [Eubacterium saburreum DSM 3986] gi|315485791|gb|EFU76171.1| valine--tRNA ligase [Eubacterium saburreum DSM 3986] Length = 880 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 72/250 (28%), Positives = 117/250 (46%), Gaps = 11/250 (4%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287 W + +T G+ D+ K F+P D+ V G DI+ F + + + + P Sbjct: 452 TWFSSALWPFSTLGWPDDTPEMKY-FYPTDVLVTGYDIIFFWVVRMVFSGYEQTGKSPF- 509 Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 K V HG + +G K+SKSLGN IDP+EVI++ G DALR L+ A G D + + + Sbjct: 510 KTVLIHGLVRDSEGRKMSKSLGNGIDPLEVIDKYGADALRMMLITGNAPGNDMRFYYEKV 569 Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 + N AN I N +R + M + + SD+ ILS ++++ E+ N+ Sbjct: 570 ESARN--FANKIWN-AARLIMMNIGESKPEAIDGSKLMLSDKWILSKTNKLINEVSTNLD 626 Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 + AL+++ E D Y + K L D T L V + V+ + LL Sbjct: 627 KFELGIALSKIYDFAWEEFCDWYIEMVK-LRLWNKEDDTKDTALAVLIYVLNTILKLLHP 685 Query: 465 FVPKLANKIF 474 F+P + +I+ Sbjct: 686 FMPFITEEIY 695 >gi|323704372|ref|ZP_08115951.1| valyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323536438|gb|EGB26210.1| valyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 878 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 89/315 (28%), Positives = 143/315 (45%), Gaps = 59/315 (18%) Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDP--------------QYIMYVWID 233 +KD +SR+ + WG +IP +DP + ++ W Sbjct: 396 ENIKDWCISRQLW-WGHRIPAWYCDDCGHVNVSKNDPVCCEKCGSKNIHQDEDVLDTWFS 454 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK----- 288 + +T G+ + + K F+P D+ V G DI+ F W A ++ +L K Sbjct: 455 SALWPFSTMGWPEETEDLKY-FFPTDVLVTGYDIIFF----WVARMIFMSLEFMKEVPFR 509 Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +V HG + +G K+SKSLGN IDP+E+IE+ G D LR+ L+ A G D + D K Sbjct: 510 RVLIHGLVRDSQGRKMSKSLGNGIDPLEIIEKYGADTLRFTLITGNAPGNDMRFSDD--K 567 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 + + AN + N SR V + L D + +D+ IL+ + V++E+ EN++ Sbjct: 568 VEASRNFANKLWN-ASRYVMLNLTSDDTTLYLEN-LNIADKWILTRLNDVVKEVTENLEK 625 Query: 408 QLIHRALAQVIS-LVSE-VDRYFDAQKP------WELKKTNPDRASTVLYVTVEVIRQLA 459 + A ++ L SE D Y + KP +E KK S + YV +R Sbjct: 626 YELGIAAGKLYDFLWSEFCDWYIELSKPVLYGDDFEAKKIT---KSVLRYVLDNTLR--- 679 Query: 460 ILLQAFVPKLANKIF 474 LL F+P + +IF Sbjct: 680 -LLHPFMPFITEEIF 693 >gi|227499878|ref|ZP_03929971.1| valine--tRNA ligase [Anaerococcus tetradius ATCC 35098] gi|227217987|gb|EEI83260.1| valine--tRNA ligase [Anaerococcus tetradius ATCC 35098] Length = 879 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 83/343 (24%), Positives = 155/343 (45%), Gaps = 42/343 (12%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ + + Y+ ++P ++++ + ++D ++SR+ + WG ++P Sbjct: 357 WFVKMDDFAKMCIEAYDKGEVKLIPDSLSKTYMNWL-NNIRDWTISRQLW-WGHRLPVFY 414 Query: 222 -DDPQYIMY-----------------------VWIDALTNYLTTTGYLDNPDGSKAKFWP 257 DD + I+ W + T G+ N + F+P Sbjct: 415 TDDGEVIVSEDEPDENGMLNGIHVTQDEDTLDTWFSSALWPFATLGW-PNENEEYDYFFP 473 Query: 258 ADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315 D+ V G DI+ F I + + + +P +F+ +G K+SKSLGN +DPI+ Sbjct: 474 TDILVTGYDIIFFWVIRMIFSSVYNTGEVPFSHVLFTGLIRDSQGRKMSKSLGNGVDPID 533 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDY 373 V+ E G DALR+ L+ + G D YD +KR+ A + AN + N SR V M ++D Sbjct: 534 VVNEYGADALRFTLITGNSPGNDMRYD----EKRILASRNFANKLWN-ASRFVLMNIEDG 588 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQ 431 D + T D+ IL + V+ ++ +N++ I A ++ + D Y + Sbjct: 589 DDLEFTGENLELEDKWILKRLNDVIVDVTKNLEKYEIGLAADRIEDFIWNEYCDWYIEFA 648 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 K L + + V V + V++ + ILL F+P + +I+ Sbjct: 649 KI-RLYGDDKEAKKNVKKVLLYVLKNMLILLHPFMPFITEEIY 690 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 24/143 (16%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA---KAAQNAGVT- 68 H+GHA I D++ R+ RL G + L+ GTD +KIA K Q+ G Sbjct: 49 HLGHALNNTIQDIIIRYKRLAGFEALWIPGTDHASISTESKVVEKIAGEGKTKQDLGREG 108 Query: 69 --------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 T + + R + D +D F T ++ + ++KK+ D G IY Sbjct: 109 FLEEAWDWTHKYGGRIKEQLRTIGVSCDWDHDSF--TMDENLTRAVKKVFKKMYDDGYIY 166 Query: 121 KG-CYSGWYSLRDEAYYNDDEVY 142 +G W L + A +D EVY Sbjct: 167 RGDRIVNWDPLAETA-ISDAEVY 188 >gi|168187608|ref|ZP_02622243.1| valyl-tRNA synthetase [Clostridium botulinum C str. Eklund] gi|169294536|gb|EDS76669.1| valyl-tRNA synthetase [Clostridium botulinum C str. Eklund] Length = 879 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 81/266 (30%), Positives = 126/266 (47%), Gaps = 18/266 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T GY + + + F+P V G DI+ F W A ++ + L Sbjct: 450 VLDTWFSSALWPFSTLGYPERTEDLEY-FYPTSTLVTGYDIIFF----WVARMIFSGLHS 504 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 KK V HG + +G K+SKSLGN +DP+EVIE+ G DALR+ L+ A G D Sbjct: 505 MKKIPFDTVLIHGIVRDSEGRKMSKSLGNGVDPLEVIEKYGADALRFMLITGNAPGNDIR 564 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQ 399 Y ++ ++ N AN I N SR V M L KD +T +D+ ILS + V++ Sbjct: 565 YYEEKVEAARN--FANKIWN-ASRFVMMNLDKDLMEKYKDCKEYTLADKWILSRINTVVK 621 Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 E EN+ + A ++ + D Y + KP L + VL V EV+++ Sbjct: 622 EATENIDKFELGIAAQKIYDFMWNEFCDWYIELVKP-ALYGDDEKAKGVVLNVLNEVLKK 680 Query: 458 LAILLQAFVPKLANKIFDILFVADEN 483 LL +P + +I+ L +E Sbjct: 681 GLKLLHPVMPFITEEIYTNLPNTEET 706 >gi|282162890|ref|YP_003355275.1| isoleucyl-tRNA synthetase [Methanocella paludicola SANAE] gi|282155204|dbj|BAI60292.1| isoleucyl-tRNA synthetase [Methanocella paludicola SANAE] Length = 1105 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 74/275 (26%), Positives = 125/275 (45%), Gaps = 19/275 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 I VW D+ T + D +WPAD V G D R F++ + Sbjct: 569 IFDVWFDSAVASWATLRFPQRKD--LMDWWPADFIVEGHDQTRGWFYSQLGAGMVGFGKA 626 Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P V HGF L +G K+SKSLGNV+ P EV+E+ G DALR +++ + A +D + Sbjct: 627 PY-NSVCMHGFTLDDQGRKMSKSLGNVVAPEEVLEKFGADALRLYVLSQSAPWEDLSFSW 685 Query: 344 DGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAFTE----SDESILSVCSRVL 398 D N N+ + M+L +D T G+ E D ILS V+ Sbjct: 686 DECGNVYRT--LNIFWNVYRFPLPYMVLDKFDPTKTTYGSVKEHLRVEDRWILSRLQAVI 743 Query: 399 QEIRENMQNQLIHRALAQVISLVSE-VDRYF---DAQKPWELKKTNPDRASTVLYVTVEV 454 +E+ E M +HR+ +I+ + E + R++ ++ W ++ +PD+ + +V V Sbjct: 744 KEVNEGMATYELHRSTRALINFILEDLSRWYVQLSRERTW-VEANDPDKLAA-YWVLYHV 801 Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489 + L+ + P +A +++ L E ++S+ Sbjct: 802 LSNTVKLMAPYTPYMAERMYQNLVRNSEPSAWESV 836 Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 23/161 (14%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQ----- 56 K +K Y Y + H+G A+ II D + R+ ++G D++ G D HG Sbjct: 36 KGNKKFYFVDGPPYTTGRIHLGTAWNKIIKDSVLRYRSMNGFDLMDRAGWDMHGLPIEVK 95 Query: 57 -------KIAKAAQNAGVT-----TKVFVDQNSR----NFRDMADVLDISYDDFIRTTEK 100 K K +N GV K F +N R F+ + LD +DD T + Sbjct: 96 VESLLGFKTKKDIENYGVAQFTEKCKAFAIENMREMTGQFKKLGVWLD--WDDPYMTLKN 153 Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 + + K+ +K + +G + + R E D EV Sbjct: 154 EYIEAAWWTIKQAHEKKLLERGLRNVNWCPRCETAIADSEV 194 >gi|256545439|ref|ZP_05472801.1| valine--tRNA ligase [Anaerococcus vaginalis ATCC 51170] gi|256398835|gb|EEU12450.1| valine--tRNA ligase [Anaerococcus vaginalis ATCC 51170] Length = 875 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 79/309 (25%), Positives = 142/309 (45%), Gaps = 41/309 (13%) Query: 202 SGLKDLSLSRKTFDWGIKIP-------------DDPQYIMYV--------------WIDA 234 ++D +SR+ + WG ++P DDP Y+ W + Sbjct: 393 ENIRDWCISRQLW-WGHRLPVFYTEDGEIIVSEDDPDENGYLDGKKVTQEEDTLDTWFSS 451 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFS 292 T G+ + + K F+P D+ V G DI+ F I + + + P +F+ Sbjct: 452 ALWPFATLGWPEETEDYKY-FFPTDILVTGYDIIFFWVIRMVFSSLYNTNKTPFDHVLFT 510 Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 +G K+SKSLGN +DPI+V+ + G DALR+ ++ + G D YD +KR+ A Sbjct: 511 GLIRDPQGRKMSKSLGNGVDPIDVVNKYGADALRFTIITGNSPGNDMRYD----EKRIVA 566 Query: 353 --DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410 + AN + N +R V M + + D + + D+ IL + V++E+ +N+ I Sbjct: 567 SRNFANKLWN-ATRFVLMNVDENDDIEFKNLDLSLEDKWILKRLNNVVEEVSKNLDKYEI 625 Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468 A +++ + E D Y + K L + ++ +TV V + V++ + LL F+P Sbjct: 626 GLAASRIEDFIWEEFCDWYIEFAKE-RLNSDDDNKKATVKKVLLYVLKDMISLLHPFMPF 684 Query: 469 LANKIFDIL 477 + +I+ L Sbjct: 685 ITEEIYKQL 693 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 47/196 (23%), Positives = 79/196 (40%), Gaps = 39/196 (19%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT- 68 PN + H+GHA I D++ R+ R+ G + + GTD K+ + +N G + Sbjct: 42 PNITGKLHLGHALNNTIQDIIIRYKRMQGYEACWIPGTDHASISTEAKVVEKIKNEGKSK 101 Query: 69 ---------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113 T+ + R R + D D F T +K R ++KK+ Sbjct: 102 DDLGRDKFLEECWDWTEEYGGTIKRQLRTVGVSCDWDRDSF--TMDKNLTRAVRKVFKKM 159 Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 D+G IY+G + + +D EVY K +G + + YFF S Sbjct: 160 YDEGLIYRGNRIVNWDPEAKTALSDAEVYHKDQEGHLWYIK-----------YFFEDS-- 206 Query: 173 QDKLLSYYESHPEFIL 188 D+ ++ + PE +L Sbjct: 207 -DEFITIATTRPETML 221 >gi|258516479|ref|YP_003192701.1| valyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] gi|257780184|gb|ACV64078.1| valyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] Length = 881 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 77/273 (28%), Positives = 124/273 (45%), Gaps = 24/273 (8%) Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276 G ++ DP ++ W + +T G+ K F+P + V G+DI+ F W Sbjct: 441 GTQLEQDPD-VLDTWFSSALWPFSTLGWPSETAELK-HFYPTSVLVTGRDIIFF----WV 494 Query: 277 AFLLSANLP----LP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 A ++ + L +P ++VF HG +L G K+SKSLGN IDPI++IE G D+LR+ LV Sbjct: 495 ARMIFSGLEFMEEVPFREVFIHGLVLDALGRKMSKSLGNGIDPIDLIESHGADSLRFMLV 554 Query: 331 REIACGKD---GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTES 386 G D F DG + + AN + N SR M L DYD P ++ + Sbjct: 555 TGNTPGNDLRFHFERLDGAR-----NFANKLWN-ASRFSLMNLSDYDPEKPVDSQDYSLA 608 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA 444 D ++S ++ + +N++ + A + + D Y + KP K Sbjct: 609 DRWMISRYQATVKSVTKNLEAYELGEAARSLYEFIWGEFCDWYLELIKPRVYGKEGEKAR 668 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 T V V++ LL F+P + +I+ L Sbjct: 669 HTAQRVLASVLKGTLELLHPFMPFITEEIWQHL 701 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 24/148 (16%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT- 68 PN Q H GHA + + D+L RF R+ G + L+ GTD G K+ + G T Sbjct: 47 PNVTGQLHGGHALDNTLQDILTRFRRMQGCNTLWLPGTDHAGIATQAKVEEQLAQEGTTK 106 Query: 69 ---------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113 + + + + R + D + F T ++ R ++ ++ Sbjct: 107 HELGREKFLERVWAWKERYGGRITHQLRRLGASCDWERERF--TMDEGCSSAVREVFIRL 164 Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 +KG IY+G Y + + +D EV Sbjct: 165 YEKGLIYRGNYITNWCPKCHTTISDIEV 192 >gi|193794300|gb|ACF21362.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794310|gb|ACF21367.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794324|gb|ACF21374.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794376|gb|ACF21400.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794450|gb|ACF21437.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794470|gb|ACF21447.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794474|gb|ACF21449.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P + D ++L + E + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAVEAGFASVGELIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166 >gi|302391303|ref|YP_003827123.1| valyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] gi|302203380|gb|ADL12058.1| valyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] Length = 883 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 15/229 (6%) Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNV 310 P + V G+DI+ F W A ++ + L ++ V HG + +G K+SKSLGN Sbjct: 480 PTSVLVTGRDIIFF----WVARMIFSGLEFMEETPFSDVLVHGLVRDAQGRKMSKSLGNG 535 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 IDPIE I+E G D LR+ LV G D + ++ ++ N N I N SR V M L Sbjct: 536 IDPIEFIDEYGADTLRFTLVTGNTPGNDMRFRQEKVEASRN--FVNKIWN-ASRFVLMNL 592 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428 +D+D +T +D+ I+S + QE+ + I A + + D Y Sbjct: 593 EDFDPEEVEELDYTLADKWIISRLNETAQEVTRTLDKYQIGNAAQTLYDFIWNEFCDWYI 652 Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + KP + + T YV V+ Q LL F+P + +I+ L Sbjct: 653 ELIKPRLYQDEDQVVKETAQYVVSSVLEQSLRLLHPFMPFVTEEIWQKL 701 >gi|326791024|ref|YP_004308845.1| valyl-tRNA synthetase [Clostridium lentocellum DSM 5427] gi|326541788|gb|ADZ83647.1| valyl-tRNA synthetase [Clostridium lentocellum DSM 5427] Length = 880 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 74/255 (29%), Positives = 119/255 (46%), Gaps = 20/255 (7%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287 W + +T G+ +N + K F+P + V G DI+ F I + +P Sbjct: 451 TWFSSALWPFSTLGWPENTEELK-HFYPTSVLVTGYDIIFFWVIRMVFSGIEQMGEIPF- 508 Query: 288 KKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDG 345 K V HG + G K+SKSLGN +DP+EVIE+ G DALR LV A G D FY Sbjct: 509 KDVLFHGLVRAADGRKMSKSLGNGVDPLEVIEKYGADALRLTLVTGNAPGNDMRFY---- 564 Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDG----MIPTPGAFTESDESILSVCSRVLQEI 401 +RV A+ GN + + I+ +Y+G + +D+ ILS + + +E+ Sbjct: 565 -YERVEAN--RNFGNKLWNAARFIMMNYEGEDINLTVDLKDLIPADKWILSKVNTLAKEV 621 Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459 +NM + A+ ++ E D Y + KP K + R + L+ V+ Q+ Sbjct: 622 TDNMDKYDLGVAVQKLYDFAWEEFCDWYIEMVKPRLYNKEDVTRPAA-LWTLKTVMTQIL 680 Query: 460 ILLQAFVPKLANKIF 474 +L ++P + +IF Sbjct: 681 KMLHPYMPFITEEIF 695 Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 E++K + + PN Q H+GHA + + D+L R+ R+ G + L+ GTD Sbjct: 32 EKDKKPFTIVMPPPNITGQLHMGHALDNTLQDILTRYKRMQGFNTLWVPGTD 83 >gi|256378249|ref|YP_003101909.1| methionine--tRNA ligase [Actinosynnema mirum DSM 43827] gi|255922552|gb|ACU38063.1| Methionine--tRNA ligase [Actinosynnema mirum DSM 43827] Length = 645 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 99/405 (24%), Positives = 165/405 (40%), Gaps = 55/405 (13%) Query: 16 PNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74 PN H+GH A + ADVL R R G D TGTD+H +A +A+ G T + Sbjct: 138 PNGGLHLGHLAGPYVRADVLVRALRSTGRDARHVTGTDDHQSHVAVSARLGGATPEQVAA 197 Query: 75 QNSRNFRDMADVLDISYDDFIR-TTEKRHHDTCRILWKKISDKGDIYKG------CYSGW 127 + + D R T H D R L ++++ + + C + Sbjct: 198 SHGEAILATLRAAGVDCDRLTRPATAPGHADRIRELITRLAESPSVTEQERDTAYCAACD 257 Query: 128 YSLRDE---------AYYNDDEVYKGADGQYYNAQ----------HNPVQWMEEEGYFFR 168 SL A +D E+ + A G+ A+ P E + Sbjct: 258 LSLHQAFARGACAHCAADSDGEICE-ACGRPNEAKDLVDPRCRLCGGPATTRPERALWLD 316 Query: 169 LSAYQDKLLSYY-ESH--PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ 225 +SA+ ++L Y +SH P+ + +ER + GL L+R+ DWG+++ D + Sbjct: 317 MSAHAEQLARYLKDSHTSPDLLALVER------LLADGLPPYRLARRA-DWGVELADGQR 369 Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-IGKDILRFHAIYWPAFLLSANL 284 + W+D +L DG PA + + +G D F+A+ PA +A L Sbjct: 370 --VDAWVDLALTFLDAARAETEQDG------PAKITLFLGYDNSFFYAVLLPAVAFAAGL 421 Query: 285 P--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 LP ++ F+ K S S G+ I + E G DA+R L+R G+ Sbjct: 422 AEHLPAAFVTNQFLHLDDAKFSTSRGHAIWADPALAEAGPDAVRLALLRNAPEGR----- 476 Query: 343 KDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTES 386 + + A LA +L ++ ++ DG++P GA+T++ Sbjct: 477 VTRITQERAALLAQDPLHLAAKEWLAGFAGVGDGVVPGTGAWTDA 521 >gi|300173956|ref|YP_003773122.1| Valyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] gi|299888335|emb|CBL92303.1| Valyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] Length = 894 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 92/358 (25%), Positives = 155/358 (43%), Gaps = 54/358 (15%) Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE-VISFVKSGLKDLSLSRKTF 214 PV+ +F +++ + L ++ E + + R E + ++D +SR+ + Sbjct: 363 PVESRLSTQWFVKMAPLAKQALDMQKNADEKVEFVPARFEDTFTRWMDNIRDWVISRQLW 422 Query: 215 DWGIKIP-----------------DDPQY--------IMYVWIDALTNYLTTTGYLDNPD 249 WG +IP D+P+ ++ W + +T G+ DN Sbjct: 423 -WGHQIPAWYKNKGTDQEEIYVGTDEPEGEGWQRDPDVLDTWFSSALWPFSTMGWPDNKA 481 Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFILH-KGEK 302 AK++P + V G DI+ F W A ++ + P K V HG I +G K Sbjct: 482 DDFAKYYPTNTLVTGYDIIFF----WVARMMFQGKEFTGQRPF-KNVLIHGLIRDGEGRK 536 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKSLGN +DP++VIE+ G DALR+FL G+D + D + N N I N Sbjct: 537 MSKSLGNGVDPMDVIEKYGADALRWFLATGSTPGQDVRFTYDKMDAAWN--FINKIWN-A 593 Query: 363 SRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 SR V M L + +P + SD+ ILS + ++++ N A ++ + + Sbjct: 594 SRYVIMNLDEKTPSTLPDLDKLSLSDKWILSRLNTTIEDVTRNFDRFEFGEAGRELYNFI 653 Query: 422 SE--VDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIF 474 D Y + K E + D+A T+ YV + +R LLQ +P + I+ Sbjct: 654 WSDFADWYIEMTK--ETLNGDADKAPVQQTLAYVLDQTLR----LLQPIMPFVTESIW 705 Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D++ R ++ G+DVL+ G D +AG+ Sbjct: 46 AIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKKMQGMDVLWLPGMD-----------HAGI 94 Query: 68 TTKVFVDQNSR 78 T+ V+Q R Sbjct: 95 ATQAKVEQRLR 105 >gi|295094145|emb|CBK83236.1| valyl-tRNA synthetase [Coprococcus sp. ART55/1] Length = 880 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 10/225 (4%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVI 311 F+P + V G DI+ F I + A + P K V HG + +G K+SKSLGN I Sbjct: 476 FYPTSVLVTGYDIIFFWVIRMVFSALEQTGKSPF-KHVLIHGLVRDDQGRKMSKSLGNGI 534 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 DP+EVI++ G DALR L+ A G D + + ++ N AN I N +R + M ++ Sbjct: 535 DPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVENSRN--FANKIWN-ATRFIMMNME 591 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429 D T +D ILS + + +E+ +NM+ + A+++V + E D Y + Sbjct: 592 KADFSDVKLSDLTIADRWILSKVNTLAKEMTDNMEKFELGIAVSKVYDFIWEEFCDWYIE 651 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 KP L + + L+ V+ Q LL ++P + +IF Sbjct: 652 MVKP-RLYNDEDETKAAALWTLKTVLIQALKLLHPYMPFITEEIF 695 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +R K + + PN Q H+GHA + + D+L RF R+ G L+ GTD A Sbjct: 32 DRSKKPFTIVMPPPNVTGQLHMGHALDNTMQDILIRFKRMQGYSALWQPGTDH-----AA 86 Query: 61 AAQNAGVTTKV 71 A VT K+ Sbjct: 87 IATEVKVTEKL 97 >gi|150389212|ref|YP_001319261.1| valyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] gi|149949074|gb|ABR47602.1| valyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] Length = 884 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 71/235 (30%), Positives = 109/235 (46%), Gaps = 15/235 (6%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVID 312 F+P D+ V G DI+ F + L +P K VF HG + G K+SKSLGN ID Sbjct: 477 FYPTDVLVTGYDIIFFWVVRMAFSGLEFMDEIPFKHVFIHGLVRDADGRKMSKSLGNGID 536 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 P+ +I++ G DALR+ LV + G D + + L+ N AN + N + +L + Sbjct: 537 PLNIIDQYGADALRFTLVTGNSPGNDMRFHMEKLESSRN--FANKLWN----ATRFVLMN 590 Query: 373 YDGMIPTPGAFTE----SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE-VDR 426 D T E +D I+S ++V +E+ ENM + A ++ + SE D Sbjct: 591 LDEKEITEEEVKEHLNTADRWIISRVNQVTKEVTENMDKFELGMAAQKIYDFIWSEYCDW 650 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 Y + K L N D+ Y V+ + LL F+P + +I+ L D Sbjct: 651 YIELTKT-RLYGENEDKRKAAQYTLTSVLADILKLLHPFMPFITEEIWQHLPTVD 704 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 14/111 (12%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S + PN Q H+GHA + + D+L R+ R+ G + L+ GTD +A + Sbjct: 40 SIVLPPPNITGQLHMGHALDHTLQDILIRWKRMQGFETLWQPGTD-----------HASI 88 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 T+V V + + ++ LDI D F++ + + R + ++ GD Sbjct: 89 ATEVKVVEKIKREEGLSK-LDIGRDGFLQRAWEWRDEHGRTIVNQMKRMGD 138 >gi|320528328|ref|ZP_08029490.1| valyl-tRNA synthetase [Solobacterium moorei F0204] gi|320131242|gb|EFW23810.1| valyl-tRNA synthetase [Solobacterium moorei F0204] Length = 870 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 93/337 (27%), Positives = 149/337 (44%), Gaps = 56/337 (16%) Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY---------I 227 ER + + ++D +SR+ + WG +IP DP+ + Sbjct: 387 ERFEKTFNGWLENIEDWCISRQLW-WGHRIPAWYNTVTGETYVGETDPEDTTNWVQDEDV 445 Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLP 285 + W + T G+ + + A+++P + V G DI+ F + + A + N P Sbjct: 446 LDTWFSSALWPFATLGWPEETE-DLARYYPTNTMVTGYDIIFFWVARMAFQARHFTKNRP 504 Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 K V HG + +G K+SKSLGN IDP++VIEE G+DALR+FL G+D Y + Sbjct: 505 F-KDVLIHGLLRDAQGRKMSKSLGNGIDPMKVIEEYGIDALRFFLTTNSTPGQDMRYIPE 563 Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE---SDESILSVCSRVLQEI 401 K + N I N SR V M L +GM T +D I++ + + + Sbjct: 564 --KVEAAGNFINKIWN-ASRFVFMNLP--EGMKVEDVDLTHLSLADAWIINRLNETITHV 618 Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPW--ELKKTNPD--------RASTVLYVT 451 ENM+ ++ S V +D W E+ KT + A + LYV Sbjct: 619 TENMEKYEFALVGNELYSFV------WDDFCSWYVEMSKTALNGTDEVAKRAAQSTLYVC 672 Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488 ++ I LLQ F+P + +I+D+L A E+ +S Sbjct: 673 LKAI---VGLLQPFMPFVTEEIYDLLPGAKESINLES 706 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 16/101 (15%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 HIGHA++ + D+++R+ R+ G D+LF G D +AG+ T+ VD +R Sbjct: 52 HIGHAWDNTLQDIISRYKRMQGYDMLFLPGMD-----------HAGIATQAKVD--ARLK 98 Query: 81 RDMADVLDISYDDFIRTT---EKRHHDTCRILWKKISDKGD 118 + D+ + F+ + + T R W K+ + D Sbjct: 99 SEGISRYDLGREKFLERAWEWKAEYAKTIRTQWGKLGNSLD 139 >gi|193794492|gb|ACF21458.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794494|gb|ACF21459.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P + D ++L + E + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GRIPEPAELEDIDRALLDAVEAGFASVGELIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166 >gi|255505616|ref|ZP_05347190.3| valine--tRNA ligase [Bryantella formatexigens DSM 14469] gi|255266928|gb|EET60133.1| valine--tRNA ligase [Bryantella formatexigens DSM 14469] Length = 889 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 121/241 (50%), Gaps = 23/241 (9%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308 F+P D+ V G DI+ F W ++ + L K H ++H +G K+SKSLG Sbjct: 484 FYPTDVLVTGYDIIFF----WVIRMVFSGLEQTGKAPFHHVLIHGLVRDSQGRKMSKSLG 539 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRS 365 N IDP+EVI++ G DALR L+ A G D FY +RV A + AN I N SR Sbjct: 540 NGIDPLEVIDKYGADALRLTLMTGNAPGNDMRFY-----WERVEASRNFANKIWN-ASRF 593 Query: 366 VSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423 + M L+ + P + T++D+ ILS + + +++ +NM+ + A+ +V + E Sbjct: 594 IMMNLEKAEIPEQMPKESLTQADKWILSKVNALAKDVTDNMEKFELGIAVQKVYDFIWEE 653 Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 D Y + KP T+ +A+ L+ V+ LL ++P + +I+ L +E Sbjct: 654 FCDWYIEMVKPRLYSDTDTTKAAA-LWTLKAVLGNALKLLHPYMPFITEEIYCTLNPQEE 712 Query: 483 N 483 + Sbjct: 713 S 713 >gi|323342873|ref|ZP_08083105.1| valine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463985|gb|EFY09179.1| valine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 861 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 87/346 (25%), Positives = 157/346 (45%), Gaps = 52/346 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ D++L++ + + ER + ++D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADEVLAHQQGDDKINFYPERFENTFTRWLDNIEDWCISRQLW-WGHRIPAWF 418 Query: 222 -----------DDPQYI---------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 + P+ I + W + +T G+ +N + + +++P ++ Sbjct: 419 HKETEEIYVGLEAPEDIENWRQDEDVLDTWFSSALWPFSTLGWPENTEDLE-RYYPTNVL 477 Query: 262 VIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIE 318 V G DI+ F + + A + + P + V HG I + G K+SKSLGN +DP++VIE Sbjct: 478 VTGYDIIFFWVARMAFQARYFTNSRPF-EDVLIHGLIRDQDGRKMSKSLGNGVDPMDVIE 536 Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 GVDALRYFL G+D Y + ++ N N I N SR V M ++D D Sbjct: 537 TYGVDALRYFLTTNSTPGQDMRYMPEKVEASWN--FINKIWN-ASRFVLMHIED-DVYEI 592 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQN---QLIHRALAQVISLVSEVDRYFDAQKPW- 434 ++ D I+ ++ L+E+ NM L+ L++ + +D W Sbjct: 593 DKAQLSQVDRHIIHKFNQTLEEVSRNMDKYEFALVGNTLSRFV---------WDDFCSWY 643 Query: 435 -ELKKTN-PDRASTVLYVT----VEVIRQLAILLQAFVPKLANKIF 474 EL K+ + V+Y T +++ + ILL F+P + +I+ Sbjct: 644 IELSKSGLQSDDAQVVYATKATLSHMLKNILILLHPFMPFVTEEIY 689 Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R+ RL G D L+ G D +AG+ Sbjct: 39 SLVIPPPNVTGKLHLGHAWDNTLQDIIIRYQRLLGKDALYLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSR 78 T+ V+Q R Sbjct: 88 ATQAKVEQKMR 98 >gi|291532689|emb|CBL05802.1| valyl-tRNA synthetase [Megamonas hypermegale ART12/1] Length = 841 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 16/230 (6%) Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----KVFSHGFIL-HKGEKISKSL 307 +F+P + V G DI+ F W A ++ L K VF HG + +G K+SKSL Sbjct: 433 QFYPTSVLVTGYDIIFF----WVARMVMMGLEFGKDIPFKHVFIHGLVRDSQGRKMSKSL 488 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN IDP+EVIE+ G D LR+ L+ G D + + ++ N AN + N SR + Sbjct: 489 GNGIDPVEVIEKYGADTLRFMLITGNTPGNDMRFYWERVESARN--FANKLWN-ASRFML 545 Query: 368 MILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424 M L+ +D +P +T +D+ ILS ++ I EN++ + A + + Sbjct: 546 MNLEGFDKTFVPEASDYTLADKWILSRYAKTAISITENLEKFELGEAGRSLYDFIWNEFC 605 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 D Y + K K N YV V+ LL F+P + +I+ Sbjct: 606 DWYIELSKARLYDKENVRPRKVAQYVLGYVLEHTLRLLHPFMPFITEEIW 655 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 13/65 (20%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73 PN Q H+GHA + + D+L RF R+ G + L+ GTD +AG+ T+ V Sbjct: 4 PNVTGQLHMGHAMDNTLQDILIRFRRMQGYNTLWMPGTD-----------HAGIATQAKV 52 Query: 74 DQNSR 78 D R Sbjct: 53 DAQLR 57 >gi|187776915|ref|ZP_02993388.1| hypothetical protein CLOSPO_00454 [Clostridium sporogenes ATCC 15579] gi|187775574|gb|EDU39376.1| hypothetical protein CLOSPO_00454 [Clostridium sporogenes ATCC 15579] Length = 881 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 84/268 (31%), Positives = 127/268 (47%), Gaps = 22/268 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D K F+P + V G DI+ F W A ++ + L Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTPDLKY-FYPNNTLVTGYDIIFF----WVARMVFSGLYC 505 Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +P V HG + +G+K+SKSLGN +DPIEVIEE G DALR+ LV A G D Sbjct: 506 MDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDPIEVIEEYGADALRFTLVTGNAPGNDIR 565 Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRV 397 Y +RV A + AN I N SR V M L KD +T +D+ ILS + V Sbjct: 566 Y----YPERVEAARNFANKIWN-ASRFVLMNLDKDLMDKYKDNKNYTIADKWILSRLNTV 620 Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 ++E+ EN++ + A ++ + D Y + KP L N + V +V+ Sbjct: 621 VKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELVKP-VLYGENEEAKGIAFNVLHKVL 679 Query: 456 RQLAILLQAFVPKLANKIFDILFVADEN 483 LL +P + +I+ L+ E+ Sbjct: 680 ETSLQLLHPIMPFITEEIYTHLYTEYES 707 >gi|194360507|gb|ACF57901.1| methionyl-tRNA synthetase [Actinomyces odontolyticus] Length = 166 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 2/165 (1%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + + DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLSRYQADALRYFISAAGPETSDSDFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IPTPG + D ++L + +++ AL Sbjct: 61 VAGWGNLVNRTASMIAKKF-GEIPTPGELEDIDRALLDAVEAGFATVGNLIRHHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQL 458 ++ + LV E ++Y +P++LK +R +TVL+ + + L Sbjct: 120 SEAMRLVGEANKYVTDTEPFKLKAPEQRERLATVLWTLAQAVADL 164 >gi|320538067|ref|ZP_08037966.1| valyl-tRNA synthetase [Treponema phagedenis F0421] gi|320145076|gb|EFW36793.1| valyl-tRNA synthetase [Treponema phagedenis F0421] Length = 900 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 93/389 (23%), Positives = 164/389 (42%), Gaps = 58/389 (14%) Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189 LR+ + ++E A G+ Y H ++ E +F ++ +K LS ++ P Sbjct: 340 LRELDLFKNEEKITHAVGECYRC-HTTIEPYLSEQWFVKMKPLAEKALSAWQKGEITFYP 398 Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------- 221 + N ++++ ++D +SR+ + WG +IP Sbjct: 399 KKWENTYAHWMEN-IRDWCISRQLW-WGHRIPAWYCDDCKQMTVSREDLSACTHCGSKNI 456 Query: 222 -DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280 DP ++ W + +T G+ + KA F+P V DI+ F W + ++ Sbjct: 457 HQDPD-VLDTWFSSWLWPFSTLGWPSKTEDLKA-FYPTTALVTAYDIIFF----WVSRMI 510 Query: 281 SANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 A L K ++ HG + +G K+SKSLGN IDP+EV++ G DAL++ L A Sbjct: 511 MAGLEFTGEVPFKDIYIHGLVRDRQGRKMSKSLGNGIDPLEVVKSYGADALKFTLAFMCA 570 Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---GAFTESDESIL 391 G+D D + K + + AN I N + IL + +G P TE D I Sbjct: 571 QGQDVLVDMESFK--LGSRFANKIWN----ASRYILGNLEGREIRPVKKSELTELDRWIY 624 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLV---SEVDRYFDAQKPWELKKTNPDRASTVL 448 ++ R+ ++ + A AQV+ + D Y +A K K + + + Sbjct: 625 HALNKAADNSRKALEAYRFNEA-AQVLYEFFWNNFCDWYVEATK-LSFKTNDENEMNRAA 682 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V + V+ + LL F+P + +I+ L Sbjct: 683 SVLLAVLEESLRLLHPFLPFVTEEIYGRL 711 Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust. Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 16/101 (15%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 H+GH + D++ R+HR+ G + L+ GTD +AG+ T+ V++ + Sbjct: 59 HMGHGLNNTLQDIVVRYHRMKGDETLWVPGTD-----------HAGIATQNVVERQLK-- 105 Query: 81 RDMADVLDISYDDFIRTT---EKRHHDTCRILWKKISDKGD 118 ++ D++ ++F++ T + HH KKI D Sbjct: 106 KEGRSRHDLTREEFLQRTWQVKDAHHAIIVNQLKKIGASAD 146 >gi|328950389|ref|YP_004367724.1| Valyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] gi|328450713|gb|AEB11614.1| Valyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] Length = 867 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 87/355 (24%), Positives = 157/355 (44%), Gaps = 61/355 (17%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 ++ + +K+++ E +P R + ++++ ++D ++SR+ + WG +IP Sbjct: 361 WWLSMKPLAEKVIAGIERGEIQFVPERWRKVNLDWLRN-IRDWNISRQLW-WGHQIPAWH 418 Query: 222 ----------------DDPQYIMY--------------VWIDALTNYLTTTGYLDNPDGS 251 +DPQ + W + L+T G+ + + Sbjct: 419 CKACGEITVPPVERYMEDPQACAHCGSPEIERDPDVFDTWFSSALWPLSTLGWPEETEDL 478 Query: 252 KAKFWPADLHVIGKDILRFHAIYW------PAFLLSANLPLPKKVFSHGFIL-HKGEKIS 304 KA F+P D+ V G DIL W + P K V HG +L KG+K+S Sbjct: 479 KA-FYPGDVLVTGYDIL----FLWVSRMEVSGYHFKGERPF-KTVLLHGLVLDEKGQKMS 532 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+DP+E++E G DALR+ LV G+D +D+ ++ + + AN + N Sbjct: 533 KSKGNVVDPLELVEAYGADALRFALVHLATGGQDIRFDRRWVE--MGRNFANKLWN---- 586 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE 423 + +L + +G T +D + + ++ ++EI + + A +V LV SE Sbjct: 587 AARFVLMNREGFEAKRDELTLADRWMQARLAQGVREITALYERYDLALAAREVYQLVWSE 646 Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D Y +A KP L++ N + L + L LL +P + ++I+ L Sbjct: 647 FCDWYIEAAKP-ALREGN----AATLKGLENALETLLKLLHPLMPFVTSEIYAAL 696 >gi|330880735|gb|EGH14884.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] Length = 334 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 83/319 (26%), Positives = 141/319 (44%), Gaps = 39/319 (12%) Query: 25 AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84 A ++ AD+ ARF R G DV+F GTDEHG AAQNA + K + + R + Sbjct: 2 AGSLLPADIYARFLRQQGHDVMFICGTDEHGTPAEIAAQNANMDVKSYCNHMYEVQRRIY 61 Query: 85 DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV--- 141 +S++ F R++ ++ + + + K+ D G I++ S +YS + + D + Sbjct: 62 ANFGLSFNFFGRSSCDQNVEITQEFFFKLQDAGYIFEDVISQYYSAVEGRFLPDRFINGQ 121 Query: 142 -----YKGADGQYYN---AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193 + A G + A NP + + + + + S+ E +P+ ++ Sbjct: 122 CPRCGFLSATGDQCDGCGALLNPEELINPKSSISGDEKLELRRTSHLFLDLEKTVPLLQK 181 Query: 194 -----------NEVIS--FVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTN 237 +IS GLK ++R WGI +P P+ + YVW DA Sbjct: 182 WHDSNRWGNLTRGIISKWMDNEGLKARCITRDN-KWGIPVPLLHLTPK-VFYVWFDAPYA 239 Query: 238 YLTTT-GYLDNPDGSKA---KFWPAD----LHVIGKDILRFHAIYWPAFLLSA--NLPLP 287 Y+ T Y D ++ K+W +D + KD + FHAI+WPA LL++ N+ L Sbjct: 240 YIAITKAYGDTLGDAETILKKWWYSDSVEYTQFMAKDNVPFHAIFWPAQLLASRDNVKLV 299 Query: 288 KKVFSHGFILHKGEKISKS 306 + ++ + G K S S Sbjct: 300 DDIKGFNWLTYDGGKFSTS 318 >gi|229107186|ref|ZP_04237171.1| Methionine--tRNA ligase [Bacillus cereus Rock3-28] gi|228676257|gb|EEL31117.1| Methionine--tRNA ligase [Bacillus cereus Rock3-28] Length = 671 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 110/541 (20%), Positives = 214/541 (39%), Gaps = 62/541 (11%) Query: 4 REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++K I+ PN H+GH + AD+L R+ +L G +V + +G D+H + A Sbjct: 123 KKKYLITATPPTPNGDLHVGHLSGPYTGADILTRYLKLKGNEVFYMSGADDHQSYVPFKA 182 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH-DTCRILWKKISDKGDIY- 120 + + D + + +I+ D F++ H + + ++K+ ++G + Sbjct: 183 GQLEKSPRETADHFANEIEKTLRLAEINPDIFVKPHFSTFHIEFVKEFFEKLWNEGKLVE 242 Query: 121 --------KGCYSGWYSLRDEAYYND-----DEVYKGADGQYYNAQH------NPV---- 157 K C Y EAY DE+ G + + NP Sbjct: 243 KEVDILFCKQCDKHLY----EAYVRGNCPHCDELSDGNACEKCGRPNLCIDLLNPTCKCC 298 Query: 158 ----QWMEEEGYFFRLSAYQDKLLSYYES---HPEFILPIERRNEVISFVKSGLKDLSLS 210 + + + FF LS Y+ +L YY+ P ER + L D+ +S Sbjct: 299 GSEPEKSKIKQLFFPLSNYKTQLKQYYKELKIGPHLTALCER------MLDEDLPDIPIS 352 Query: 211 RKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD----LH 261 + DWGI +P + +YVW + YL+ T L N + FW ++ Sbjct: 353 HVS-DWGIPVPVEGYENQTIYVWFEMAPGYLSATNELIQDKNLSYTLRDFWKNKDTTIIN 411 Query: 262 VIGKDILRFHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 G D FH++ +PA L S ++ LPK + ++ F +G K S S G+ + E++E Sbjct: 412 FFGYDNGYFHSVLFPAIWLAYSEDINLPKTMITNEFYQLEGLKFSTSRGHAVWGKELLEN 471 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 D +RY+L + + + V+ +L + + + ++ P Sbjct: 472 ASHDVVRYYLSYSRPETVETNFTMEEFNHIVDTNLNQEWESWLHDLKCKLEAEFPNGAPE 531 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPW-ELK 437 + + +R++ EI + N + + ++++ + + + F A + + + Sbjct: 532 LETLSGNYLMYYQHVNRIMNEIMNAYEPNTFSPQKVVRLLNELVRIAKKFSAGEEFLTVL 591 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI-----FDILFVADENRCFQSLDQR 492 K N R +T + + + + LAI +P + F++ DE F Q+ Sbjct: 592 KNNQQRRNTAIALELYTAKILAIFSSPIMPTFGKMLWGDLGFNVEMQLDEEVSFLPAGQK 651 Query: 493 L 493 + Sbjct: 652 V 652 >gi|330718899|ref|ZP_08313499.1| valyl-tRNA synthetase [Leuconostoc fallax KCTC 3537] Length = 873 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 72/283 (25%), Positives = 126/283 (44%), Gaps = 43/283 (15%) Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKT 213 PV+ +F +++ +++L+ + E + +P ER + + ++D +SR+ Sbjct: 342 PVESRLSTQWFVKMAPLAEQILAMQQKPDEKVNFVP-ERFEDTFTHWMENIRDWVISRQL 400 Query: 214 FDWGIKIP------DDPQYIMYV-------------------WIDALTNYLTTTGYLDNP 248 + WG +IP + Q +YV W + +T G+ + Sbjct: 401 W-WGHQIPAWYKNKNTDQEEIYVGQEAPEGEGWERDEDVLDTWFSSALWPFSTMGWPEKT 459 Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFILH-KGE 301 DG A+++P + V G DI+ F W A ++ + P K V HG I +G Sbjct: 460 DGDFARYYPTNTLVTGYDIIFF----WVARMMFQGKEFTGERPF-KNVLIHGLIRDGEGR 514 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKSLGN +DP++VIE+ G DALR+FL G+D + + + N N I N Sbjct: 515 KMSKSLGNGVDPMDVIEKYGADALRWFLATGSTPGQDTRFTYEKMDASWN--FINKIWNA 572 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404 + + +D +P T +D+ ILS + + + N Sbjct: 573 SRYVIMNLAEDTPTKLPDFDKLTLADKWILSRLNTTIANVTRN 615 Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 15/88 (17%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 24 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWVPGMD-----------HAGI 72 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFI 95 T+ V+Q R +D D+ + F+ Sbjct: 73 ATQAKVEQRLR--QDGVTRYDLGREKFV 98 >gi|297566936|ref|YP_003685908.1| valyl-tRNA synthetase [Meiothermus silvanus DSM 9946] gi|296851385|gb|ADH64400.1| valyl-tRNA synthetase [Meiothermus silvanus DSM 9946] Length = 872 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 93/367 (25%), Positives = 155/367 (42%), Gaps = 62/367 (16%) Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 P++ M +F R+ K+L E +P ER +V ++D ++ R+ + Sbjct: 356 EPIEPMLLTQWFVRMKPVAQKVLEGLERGEMRFVP-ERWEKVNRDWLENIRDWAIGRQLW 414 Query: 215 DWGIKIP----------------------DDPQY----------IMYVWIDALTNYLTTT 242 WG +IP DP+Y + W + +T Sbjct: 415 -WGHQIPAWYDEEGNIYVPDPENPDLDCDQDPRYAHLRLRRDEDVFDTWFSSALWPFSTL 473 Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH---- 298 G+ D+ + K KF+P D+ V G DI+ +W A + + + H +LH Sbjct: 474 GWPDDTEDLK-KFYPTDVLVTGYDII----FFWVARMQMSGYQFTGQAPFHTIVLHGLYL 528 Query: 299 --KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 KG+K+SKS GN IDP+E+I+ G DA R+ G+D +D ++ N AN Sbjct: 529 DEKGQKMSKSKGNGIDPLELIDRYGADACRFAWDYLATGGQDIRHDPRRYEQGRN--FAN 586 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGA----FTESDESILSVCSRVLQEIRENMQNQLIHR 412 + N + +L + D + T A T +D + S SR + EI E + + R Sbjct: 587 KLWN----AARFVLMNKDAIRQTQDAKREDLTLADRWMTSRLSRGIAEITEAYEAYDLGR 642 Query: 413 ALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 A + LV SE D Y +A KP L++ N + L+ + L LL +P + Sbjct: 643 AARLIYDLVWSEFCDWYLEAAKP-ALREGN----TATLHTLEHTLAALLKLLHPIMPFIT 697 Query: 471 NKIFDIL 477 ++++ L Sbjct: 698 SELYQAL 704 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 11/56 (19%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76 H+GHA + I D L RF R+ G + L+ GTD +AG+TT+V V++ Sbjct: 56 HLGHALDNTIIDTLIRFKRMQGYEALYLPGTD-----------HAGITTQVLVERE 100 >gi|168183482|ref|ZP_02618146.1| valine--tRNA ligase [Clostridium botulinum Bf] gi|237796619|ref|YP_002864171.1| valyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657] gi|182673388|gb|EDT85349.1| valine--tRNA ligase [Clostridium botulinum Bf] gi|229262502|gb|ACQ53535.1| valine--tRNA ligase [Clostridium botulinum Ba4 str. 657] Length = 881 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 84/268 (31%), Positives = 127/268 (47%), Gaps = 22/268 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D K F+P + V G DI+ F W A ++ A L Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTPDLKY-FYPNNTLVTGYDIIFF----WVARMVFAGLYC 505 Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +P V HG + +G+K+SKSLGN +DPIEVI+E G DALR+ LV A G D Sbjct: 506 MDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDPIEVIDEYGADALRFTLVTGNAPGNDIR 565 Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRV 397 Y +RV A + AN I N SR V M L KD +T +D+ ILS + V Sbjct: 566 Y----YPERVEAARNFANKIWN-ASRFVLMNLDKDLMDKYKDNKNYTIADKWILSRLNTV 620 Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 ++E+ EN++ + A ++ + D Y + KP L N + V +V+ Sbjct: 621 VKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELVKP-VLYGENEEAKGIAFNVLHKVL 679 Query: 456 RQLAILLQAFVPKLANKIFDILFVADEN 483 LL +P + +I+ L+ E+ Sbjct: 680 ETSLQLLHPIMPFITEEIYTHLYTEYES 707 >gi|294155780|ref|YP_003560164.1| valine--tRNA ligase [Mycoplasma crocodyli MP145] gi|291600430|gb|ADE19926.1| valine--tRNA ligase [Mycoplasma crocodyli MP145] Length = 830 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 82/357 (22%), Positives = 157/357 (43%), Gaps = 53/357 (14%) Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208 Y + P++ + +F ++ + +L + + + R +++ S + D + Sbjct: 342 YSERSNTPIEILVLPQWFVKMETFAKDILQHLRTKDKVKFYPPRFIKILKNWMSNIHDWT 401 Query: 209 LSRKTFDWGIKIP-------------------DDPQYIMYVWIDALTNYLTTTGYLDNPD 249 +SR+ + WG +IP + ++ W + + G+ + Sbjct: 402 ISRQIW-WGHRIPVWYKGDQIKVQTTSPGLDWKQDEDVLDTWFSSGLSPFVFLGWPQKNE 460 Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKI 303 K +++P L V G D++ F W A + L + K+ V HG I +G K+ Sbjct: 461 MIK-RYYPTSLLVTGSDLIFF----WIARMYMFGLDVMKQKPFENVLIHGLIRDEQGRKM 515 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSL N IDPI+VI+E G DAL++FL+ G D Y D +K L N + N +S Sbjct: 516 SKSLNNGIDPIDVIDEYGADALKWFLITNTTPGFDIKYSPDKIKSAWG--LCNKLWN-IS 572 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R ++ + D + I T++D+ I + S +++ I ++M+N +Q+ + Sbjct: 573 RFINELPNDNNNKI------TDADKWINNKLSLLIKSINKSMKNYEFTLVGSQISKFI-- 624 Query: 424 VDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 ++ W E K NP + +L +++ I++ F+ + KIF +F Sbjct: 625 ----YNDLSGWYVEFLKVNPSKKQALL-----ILKNTLIVVNPFLSFVTYKIFKDIF 672 Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust. Identities = 25/104 (24%), Positives = 52/104 (50%), Gaps = 14/104 (13%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73 PN + H+GHA++ +I D + R+ +L G D + +G D +AG+ T+ + Sbjct: 42 PNVTGKLHLGHAFDTLIPDTIIRYKKLKGFDTFWISGMD-----------HAGIATQSKI 90 Query: 74 DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117 +++ N + + DI ++F++ T + D + ++ S G Sbjct: 91 EEHLWNTKKLTK-HDIGREEFLKLTWQWKEDYANLFREQWSRLG 133 >gi|193794444|gb|ACF21434.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAVEAGFASVGDLISQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPTTQARLATVLHTLAQAVTDL 166 >gi|266625215|ref|ZP_06118150.1| valine--tRNA ligase [Clostridium hathewayi DSM 13479] gi|288862886|gb|EFC95184.1| valine--tRNA ligase [Clostridium hathewayi DSM 13479] Length = 464 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 112/228 (49%), Gaps = 16/228 (7%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P D+ V G DI+ F I + + LP V HG + +G K+SKSLGN I Sbjct: 64 FYPTDVLVTGYDIIFFWVIRMVFSGIEHTGQLPF-NTVLMHGLVRDSEGRKMSKSLGNGI 122 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368 DP+EVI++ G DALR L+ A G D FY +RV A + AN + N SR + M Sbjct: 123 DPLEVIDKYGADALRMTLITGNAPGNDMRFY-----WERVEASRNFANKVWN-ASRFIMM 176 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 ++ T +D+ ILS + + +++ +N+ + AL +V + E D Sbjct: 177 NIEKAPDSRAELSDLTMADKWILSKANSLARDVTDNLDKFELGIALQKVYDFIWEEFCDW 236 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 Y + KP + + +A+ + + +I L LL ++P L +IF Sbjct: 237 YIEMVKPRLWNEEDTTKAAAIWTLKTVLINSLK-LLHPYMPFLTEEIF 283 >gi|255527795|ref|ZP_05394646.1| methionyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|255508508|gb|EET84897.1| methionyl-tRNA synthetase [Clostridium carboxidivorans P7] Length = 68 Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 35/61 (57%), Positives = 45/61 (73%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++ YI+T I YP+A+ HIG+ Y I AD LARF RL G DV+F TGTDEHGQKI K ++ Sbjct: 3 KKPYYITTPIYYPSAKLHIGNTYTTIAADALARFKRLTGYDVMFLTGTDEHGQKITKISR 62 Query: 64 N 64 + Sbjct: 63 S 63 >gi|226325482|ref|ZP_03801000.1| hypothetical protein COPCOM_03287 [Coprococcus comes ATCC 27758] gi|225206225|gb|EEG88579.1| hypothetical protein COPCOM_03287 [Coprococcus comes ATCC 27758] Length = 731 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 74/256 (28%), Positives = 122/256 (47%), Gaps = 15/256 (5%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287 W + +T G+ + + K F+P D+ V G DI+ F I + + + P Sbjct: 299 TWFSSALWPFSTLGWPEETEDFKY-FYPTDVLVTGYDIIFFWVIRMVFSGYAHTGKAPF- 356 Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDG 345 V HG + +G K+SKSLGN IDP+EVI+E G DALR L+ A G D FY++ Sbjct: 357 HTVLIHGLVRDSQGRKMSKSLGNGIDPLEVIDEYGADALRLTLITGNAPGNDMRFYNERV 416 Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405 R + AN + N SR + M ++D P F +D+ ILS + + +++ ENM Sbjct: 417 ESSR---NFANKVWN-ASRFIMMNMEDKVISKPDEADFEVTDKWILSKVNTLAKDVTENM 472 Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAIL 461 + A+ +V + + D Y + K + + + N A+ L+ V+ + Sbjct: 473 DKFELGIAVQKVYDFIWDEFCDWYIELVK-YRIYHSDENYKSANAALWTLKTVLGNALKM 531 Query: 462 LQAFVPKLANKIFDIL 477 L F+P + +I+ L Sbjct: 532 LHPFMPFVTEEIYSAL 547 >gi|239618105|ref|YP_002941427.1| valyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] gi|239506936|gb|ACR80423.1| valyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] Length = 867 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 101/392 (25%), Positives = 160/392 (40%), Gaps = 55/392 (14%) Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189 L ++ Y E A G+ Y H V+ + ++ ++ ++ E P Sbjct: 324 LEEQGYLEKIESMTHAVGKCYRC-HTVVEPSLSDQWYVKIGPLAERAKKAVEDGEVVFFP 382 Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDP----------- 224 ER +V + ++D +SR+ + WG +IP DDP Sbjct: 383 -ERWKKVYLNWMNEIRDWCISRQLW-WGHRIPVWYCNDCGEIIVEEDDPTSCPKCGSKSL 440 Query: 225 ---QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281 + ++ W + TT G+ + K F+P + V G DI+ F W A ++ Sbjct: 441 RQDEDVLDTWFSSQLWPFTTLGWPGETEDLKT-FYPTSVLVTGFDIIFF----WVARMIM 495 Query: 282 ANLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 A + V+ H + K G K+SKSLGN IDP++VIEE G D +R+ L A Sbjct: 496 AGYHFTGEKPFSDVYIHQLVRDKHGRKMSKSLGNGIDPLDVIEEYGADPMRFTLSMLAAQ 555 Query: 336 GKDGFYDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 G+D D D K+ AN I N SR M L +Y + T D ILS Sbjct: 556 GRDIKLDPRFFDTYKR-----FANKIWN-ASRFAIMNLDNYVPIELTEETLELEDRWILS 609 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYV 450 R ++++ + M+N + A + S D Y + KP + N V Sbjct: 610 RLQRTIEQVTDAMENYDFNIAAKAIYSFFWNEFCDWYIETVKP--RLRENGMTKHVAQNV 667 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 V+V+ Q LL F+P + +++ L V E Sbjct: 668 LVKVLDQSLRLLHPFMPFITEELWQKLPVGGE 699 >gi|326201136|ref|ZP_08191008.1| valyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] gi|325988704|gb|EGD49528.1| valyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] Length = 883 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 78/267 (29%), Positives = 126/267 (47%), Gaps = 18/267 (6%) Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276 G K + Q + W + +T G+ D + + F+P D+ V G DI+ F W Sbjct: 441 GSKRIEQDQDTLDTWFSSALWPFSTLGWPDKTEDLEY-FYPTDVLVTGYDIIFF----WV 495 Query: 277 AFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 A ++ + + K+ VF HG + +G K+SKSLGN IDP+EVI + G DALR+ L Sbjct: 496 ARMIFSGMEHMKQEPFKYVFIHGIVRDSQGRKMSKSLGNGIDPLEVIAQYGTDALRFALT 555 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDES 389 + G D Y + ++ N AN + N SR V M +D D F+ +D+ Sbjct: 556 IGNSPGNDLRYSPEKVEAARN--FANKVWN-ASRFVLMNFDEDLDFSKVDKKKFSIADKW 612 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447 I+S + V +E+ EN++ + L +V + E D Y + KP + + R Sbjct: 613 IMSRINTVTKEVTENIEKFELGLGLQKVYDFIWEEFCDWYIEMVKPKLYDRESEGRLE-A 671 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIF 474 YV V+ LL ++P + +I+ Sbjct: 672 QYVLNFVLGNAMKLLHPYMPFVTEEIY 698 Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 24/142 (16%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56 ++ K + I PN Q H+GHA + + D+L R R+ G L+ GTD Sbjct: 35 DKNKKPFTIVIPPPNITGQLHMGHALDNTLQDILIRTKRMQGYSALWLPGTDHASIATEA 94 Query: 57 KIAKAAQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100 KI A G++ K++ + + + D + F T ++ Sbjct: 95 KIVDALAKDGISKDMLGREKFLEKAWEWRKIYGGRIVEQLKKLGSSCDWERERF--TMDE 152 Query: 101 RHHDTCRILWKKISDKGDIYKG 122 + ++ K+ DKG IYKG Sbjct: 153 GLSKAVQEVFLKLYDKGLIYKG 174 >gi|193794360|gb|ACF21392.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAVEAGFASVGDLISQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMHLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166 >gi|83589396|ref|YP_429405.1| valyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] gi|83572310|gb|ABC18862.1| valyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] Length = 880 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 87/314 (27%), Positives = 139/314 (44%), Gaps = 54/314 (17%) Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDAL 235 ++D +SR+ + WG +IP +DP+ ++ W + Sbjct: 399 IRDWCISRQLW-WGHRIPVWYCQQCGEEICSREDPEECPACGSTALEQDPDVLDTWFSSA 457 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKV 290 +T G+ D +A F+P + V G+DI+ F W A +L L +P ++V Sbjct: 458 LWPFSTLGWPDRTPELEA-FYPTSVLVTGRDIIFF----WVARMLFMGLEFMGEVPFREV 512 Query: 291 FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 HG +L +G K+SKSLGN +DP+EVIE+ G D LR LV G D + + L+ Sbjct: 513 LIHGLVLDAQGRKMSKSLGNGVDPMEVIEKYGADTLRLMLVTGNTPGNDLRFHPERLEGT 572 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 N AN I N +R M L+DY+ T +D ILS ++++ E+ ++ Sbjct: 573 RN--FANKIWN-AARFALMNLEDYEPAPLERENLTLADRWILSRLNKLVLEVNACLEAYE 629 Query: 410 IHRALAQVISLVSE------VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463 I +V ++ E D Y + KP L N V V V+ + LL Sbjct: 630 I----GEVARMLYEFFWGEFCDWYIELIKP-RLYGENRRERQVAQEVLVTVLGKSLQLLH 684 Query: 464 AFVPKLANKIFDIL 477 F+P + +I+ L Sbjct: 685 PFMPFITEEIWQHL 698 Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 22/141 (15%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-------- 68 H+GHA + + D+L R+HR+ G L+ GTD G ++ + G++ Sbjct: 53 HLGHALDNTLQDILTRWHRMRGDATLWIPGTDHAGIATQARVEEELAKEGLSKYDLGRDR 112 Query: 69 --------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 + D+ +R R + D S + F T ++ R ++ ++ +KG IY Sbjct: 113 FLERVWEWKHQYGDRITRQLRLLGSSCDWSRERF--TMDEGCSRAVREVFVRLYEKGLIY 170 Query: 121 KGCYSGWYSLRDEAYYNDDEV 141 +G Y + R +D EV Sbjct: 171 RGSYIINWCPRCRTTISDIEV 191 >gi|229118537|ref|ZP_04247890.1| Methionine--tRNA ligase [Bacillus cereus Rock1-3] gi|228664918|gb|EEL20407.1| Methionine--tRNA ligase [Bacillus cereus Rock1-3] Length = 671 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 110/541 (20%), Positives = 215/541 (39%), Gaps = 62/541 (11%) Query: 4 REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++K I+ PN H+GH + AD+L R+ +L G +VL+ +G D+H + A Sbjct: 123 KKKYLITATPPTPNGDLHVGHLSGPYTGADILTRYLKLKGNEVLYMSGADDHQSYVPFKA 182 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH-DTCRILWKKISDKGDIY- 120 + + D + + +I+ D F++ H + + ++K+ ++G + Sbjct: 183 GQLEKSPRETADHFANEIEKTLRLAEINPDIFVKPHFSTFHIEFVKEFFEKLWNEGKLVE 242 Query: 121 --------KGCYSGWYSLRDEAYYND-----DEVYKGADGQYYNAQH------NPV---- 157 K C Y EAY DE+ G + + NP Sbjct: 243 KEVDILFCKQCDKHLY----EAYVRGNCPHCDELSDGNACEKCGRPNLCIDLLNPTCKCC 298 Query: 158 ----QWMEEEGYFFRLSAYQDKLLSYYES---HPEFILPIERRNEVISFVKSGLKDLSLS 210 + + + FF LS Y+ +L YY+ P ER + L D+ +S Sbjct: 299 GSEPEKSKIKQLFFPLSNYKTQLKQYYKELKIGPHLTALCER------MLDEDLPDIPIS 352 Query: 211 RKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD----LH 261 + DWGI +P + +YVW + YL+ T L N + FW ++ Sbjct: 353 HVS-DWGIPVPVEGYENQTIYVWFEMAPGYLSATNELIQDKNLSYTLRDFWNNQDTTIIN 411 Query: 262 VIGKDILRFHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 G D FH++ +PA L S ++ LPK + ++ F +G K S S G+ + E++E Sbjct: 412 FFGYDNGYFHSVLFPAIWLAYSEDINLPKTMITNEFYQLEGLKFSTSRGHAVWGKELLEN 471 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 D +RY+L + + + V+ +L + + + ++ P Sbjct: 472 ASHDVVRYYLSYSRPETVETNFTMEEFNHIVDTNLNQEWESWLHDLKCKLEAEFANGAPE 531 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPW-ELK 437 + + +R++ EI + N + + ++++ + + + F A + + + Sbjct: 532 LETLSGNYLMYYQHVNRIMNEIMNAYEPNTFSPQKVVRLLNELVRIAKKFSAGEEFLTVL 591 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI-----FDILFVADENRCFQSLDQR 492 K N R +T + + + + LA+ +P + F++ DE F Q+ Sbjct: 592 KNNQQRRNTAIALELYTAKILALFSSPIMPTFGKMLWGDLGFNVDMQLDEEVSFLPAGQK 651 Query: 493 L 493 + Sbjct: 652 V 652 >gi|171680540|ref|XP_001905215.1| hypothetical protein [Podospora anserina S mat+] gi|170939897|emb|CAP65123.1| unnamed protein product [Podospora anserina S mat+] Length = 663 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 120/536 (22%), Positives = 218/536 (40%), Gaps = 62/536 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ AD AR+ R G + L+ GTDE+G A Sbjct: 73 KRNILITSALPYINNVPHLGNIIGSVLSADTFARYSRARGFNSLYIGGTDEYGTTTEARA 132 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T + D+ + IS+D F RTT + + ++ K+ D G + + Sbjct: 133 LVENCTLQELCDKYYAIHAAVYKWFSISFDIFGRTTTPLQTEITQDIFLKLKDNGFLEER 192 Query: 123 CYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHN-------------------------P 156 + Y + + D V + D Y +A+ + P Sbjct: 193 MTTQLYCEQHHLFLADRFVEGECPDCGYVDARGDQCDLCGKLLESLELIRPRCKVDGSVP 252 Query: 157 VQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 V E + F L Q ++ +++ ES + + +++K GL+ S++R Sbjct: 253 VT-KETKHIFLELDKLQPEVEAFFQESAAKGAWSSNGTSITAAWLKEGLQPRSITRD-LK 310 Query: 216 WGIKIPDD----PQYIMYVWIDAL-TNYLTTTGYLDNPDGSKAKFW--PADLHV---IGK 265 WG +P + ++Y W DA L + Y D + K+W P D+ + +GK Sbjct: 311 WGTPVPTSLEGYEEKVIYSWFDAWQVEILFHSNYTDQWE----KWWRSPDDVQLYQFMGK 366 Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322 D + +H+I +PA + + P K + + ++ ++G K SKS G V EV Sbjct: 367 DNVVYHSIIFPATKIGTHEPWTKLHHLSTTDYLTYEGGKFSKSRGIGVFGDSARETEVPS 426 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPG 381 D R++L+ D + DG N L +GN VSR V I + ++ ++P Sbjct: 427 DIWRFYLLYCRPETGDSEFTWDGFISANNNLLLKNLGNFVSRVVKFINSRHFNNVVPDWT 486 Query: 382 AFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKT 439 + E S ++ + +++L + + + + L + + + + A K L +T Sbjct: 487 QYGEPSFDAFKADINQLLAQYIQELDGVKLRAGLLTALQISQRGNGFLQASKLDNSLYET 546 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495 P + + V IL +P L D + E Q L R+KP Sbjct: 547 QPAKCAAV------------ILRANALPILEEWTADSIRPGHEISLSQHLFSRIKP 590 >gi|222099723|ref|YP_002534291.1| Valyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] gi|221572113|gb|ACM22925.1| Valyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] Length = 868 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 30/269 (11%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP- 285 ++ W + +T G+ + + K +++P DL V G DI+ F W A ++ Sbjct: 450 VLDTWFSSALWPFSTLGWPEETEDLK-RYYPTDLLVTGFDIIFF----WVARMIMMGYEF 504 Query: 286 LPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 + +K FSH +I H+ G K+SKSLGN IDP+EVI+E G D +R+ L A G+D Sbjct: 505 MNEKPFSHVYI-HQLVRDKYGRKMSKSLGNGIDPLEVIDEYGADPMRFTLAILAAQGRDI 563 Query: 340 FYDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396 D D KK AN I N +R V M L+DY +P T D+ IL+ ++ Sbjct: 564 KLDPRYFDAYKK-----FANKIWN-ATRFVLMNLEDYKE-VPLENLKT-VDKWILTRLNK 615 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 ++E+ ++N + A + + + D Y +A KP LK T+L T++ Sbjct: 616 TVKEVTSALENYDFNIAARTIYNFFWDEFCDWYIEASKP-RLKTEERHLVQTLLVKTLDT 674 Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN 483 + LL F+P L +++ L V E+ Sbjct: 675 SLR---LLHPFMPFLTEELWQKLPVDGES 700 Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 23/154 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA----- 62 S I PN + H+GHA + + D++ R+ R+ G DVL+ G D G A Sbjct: 40 SIVIPPPNITGRIHMGHALNITLQDIVVRYKRMKGYDVLWVPGEDHAGIATQNAVEKFLL 99 Query: 63 QNAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCR 107 Q G T T + ++ R R+ L S D+ R T ++ R Sbjct: 100 QTQGKTREEIGREKFLEITWEWANKYRREIREQIKALGASV-DWTRERFTLDEGLSRAVR 158 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 ++ ++ KG IY+G Y + R + +D+EV Sbjct: 159 KVFVELYKKGLIYRGKYIVNWCPRCKTVLSDEEV 192 >gi|193794326|gb|ACF21375.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794448|gb|ACF21436.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPAELQDIDRTLLDAVEAGFASVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166 >gi|193794422|gb|ACF21423.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPKPAELEDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166 >gi|193794304|gb|ACF21364.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794322|gb|ACF21373.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794328|gb|ACF21376.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794338|gb|ACF21381.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794340|gb|ACF21382.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794342|gb|ACF21383.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794356|gb|ACF21390.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794364|gb|ACF21394.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794378|gb|ACF21401.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794380|gb|ACF21402.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794392|gb|ACF21408.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794408|gb|ACF21416.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794434|gb|ACF21429.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794440|gb|ACF21432.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794454|gb|ACF21439.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPQPAELEDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166 >gi|193794362|gb|ACF21393.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794370|gb|ACF21397.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794402|gb|ACF21413.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794420|gb|ACF21422.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794514|gb|ACF21469.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794530|gb|ACF21477.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166 >gi|153812839|ref|ZP_01965507.1| hypothetical protein RUMOBE_03246 [Ruminococcus obeum ATCC 29174] gi|149831051|gb|EDM86140.1| hypothetical protein RUMOBE_03246 [Ruminococcus obeum ATCC 29174] Length = 895 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 71/239 (29%), Positives = 118/239 (49%), Gaps = 17/239 (7%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P D+ V G DI+ F I + A + +P V HG + +G K+SKSLGN I Sbjct: 488 FYPTDVLVTGYDIIFFWVIRMVFSALEQTGEVPF-HHVLIHGLVRDSQGRKMSKSLGNGI 546 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 DP+EVI++ G DALR L+ A G D + + ++ N AN I N SR + M L+ Sbjct: 547 DPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVESSRN--FANKIWN-ASRFIMMNLE 603 Query: 372 DYDGMIPTPGAFTE---SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 + P E D+ ILS + V++E+ +NM + A+ +V + + D Sbjct: 604 --GKTVTEPADLNELCLEDKWILSKLNTVIREVTDNMDKYELGIAVQKVYDFLWDELCDW 661 Query: 427 YFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 Y + K W+ ++ +P A+ L+ + + LL ++P + +I+ L +E+ Sbjct: 662 YIEMAKVRLWKAEE-DPKAANNALWTLRTALTEGLKLLHPYMPFITEEIYCTLLPEEES 719 Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 15/83 (18%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73 PN Q H+GHA + + D+L RF R+ G + L+ GTD +A + T+V V Sbjct: 57 PNVTGQLHMGHALDETMQDILIRFKRMQGYEALWQPGTD-----------HAAIATEVKV 105 Query: 74 DQNSRNFRDMADVLDISYDDFIR 96 + ++ D LDI ++F++ Sbjct: 106 IDKLK--KEGIDKLDIGREEFLK 126 >gi|290890940|ref|ZP_06554004.1| hypothetical protein AWRIB429_1394 [Oenococcus oeni AWRIB429] gi|290479339|gb|EFD87999.1| hypothetical protein AWRIB429_1394 [Oenococcus oeni AWRIB429] Length = 902 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 79/273 (28%), Positives = 120/273 (43%), Gaps = 18/273 (6%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLL 280 DP ++ W + +T G+ D + +F+P V G DI+ F + + A Sbjct: 462 DPD-VLDTWFSSALWPFSTLGWPDTNNSDYKRFYPTSTMVTGYDIIFFWISRMIFQAKEF 520 Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 + P K V HG I KG K+SKSLGN IDP++VI + G DALR+FL G+D Sbjct: 521 TGTRPF-KNVLIHGLIRDSKGRKMSKSLGNGIDPMDVINKYGTDALRWFLSTGSTPGQDL 579 Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVL 398 + D + N N I N VSR V M L+ D +P +D+ ILS + + Sbjct: 580 NFSNDKMDSAWN--FINKIWN-VSRYVLMNLETDTKIELPDRNLLALADKWILSRLNSTI 636 Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA---STVLYVTVE 453 + + +N A Q+ + + + D Y + K + N D A V V Sbjct: 637 ENVTKNFDKFEFGEAGRQLYNFIWDDFADWYIEMTK----ETLNDDSALNKRPVQQVLAY 692 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 V+ Q LL +P + I+ L +N+ Sbjct: 693 VLDQTLRLLHPIMPFVTEAIWQQLPQHQDNQSL 725 Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D+L R R+ G D L+ G D G K+ + Sbjct: 51 SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGLDHAGIATQAKVEARLR 110 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVD+ + M LD S + F T +K ++ R Sbjct: 111 EDGISRYDLGREKFVDKVLQWKDEYASIIKEQWAKMGLSLDFSRERF--TLDKGLNEAVR 168 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G Y W A + + ++K G +Y+ ++ Sbjct: 169 KVFVDLYKKGLIYRGEYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 216 >gi|193794306|gb|ACF21365.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794308|gb|ACF21366.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794314|gb|ACF21369.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794318|gb|ACF21371.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794330|gb|ACF21377.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794346|gb|ACF21385.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794368|gb|ACF21396.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794374|gb|ACF21399.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794382|gb|ACF21403.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794410|gb|ACF21417.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794464|gb|ACF21444.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794472|gb|ACF21448.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794478|gb|ACF21451.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794482|gb|ACF21453.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794484|gb|ACF21454.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794486|gb|ACF21455.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794488|gb|ACF21456.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794490|gb|ACF21457.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAVEAGFASVGDLISQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166 >gi|167766367|ref|ZP_02438420.1| hypothetical protein CLOSS21_00871 [Clostridium sp. SS2/1] gi|317496795|ref|ZP_07955125.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] gi|167711958|gb|EDS22537.1| hypothetical protein CLOSS21_00871 [Clostridium sp. SS2/1] gi|291559231|emb|CBL38031.1| valyl-tRNA synthetase [butyrate-producing bacterium SSC/2] gi|316895807|gb|EFV17959.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] Length = 879 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 100/408 (24%), Positives = 173/408 (42%), Gaps = 81/408 (19%) Query: 137 NDDEVYKGADGQY-----YNAQHNPVQWMEEEGYFFRLSAYQ------DKLLSYYES--H 183 NDD G+Y Y A+ V +EE+GY ++ ++ D+ + E Sbjct: 300 NDDATINKNGGKYEGMDRYEARKAIVADLEEQGYLVKIKEHEHNVGTHDRCGTTVEPMIK 359 Query: 184 PEFILPIER-RNEVISFVKSG-------------------LKDLSLSRKTFDWGIKIP-- 221 P++ + +E I VK+G ++D +SR+ + WG +IP Sbjct: 360 PQWFVKMEELAKPAIEAVKNGDLKFVPERYTKTYLHWLENIRDWCISRQLW-WGHRIPAY 418 Query: 222 ------------DDPQYI--------------MYVWIDALTNYLTTTGYLDNPDGSKA-- 253 + P+ + W + +T G+ P+ +K Sbjct: 419 YCDECGEVVVARETPEVCPKCGCKHFTQDEDTLDTWFSSALWPFSTLGW---PEKTKELD 475 Query: 254 KFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNV 310 F+P + V G DI+ F + + + + P V HG + +G K+SKSLGN Sbjct: 476 YFYPTNTLVTGYDIIFFWVVRMVFSGYEQTGKSPF-DTVLIHGLVRDEQGRKMSKSLGNG 534 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368 I+P++VI + G DALR+ L+ A G D Y +KRV A + AN I N SR + M Sbjct: 535 INPLDVIAQYGADALRFTLITGNAPGNDMRY----TEKRVIASRNFANKIWN-ASRFIMM 589 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 L+ D T T +D+ ILS + + +++ +NM+ + A+ ++ + E D Sbjct: 590 NLEQADFSDVTLEDLTSADKWILSKLNTLAKDVTDNMEKYELGIAVQKLNDFLWEEFCDW 649 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 Y + KP L + L+ V+ + LL ++P + +I+ Sbjct: 650 YIEMVKP-RLYNDEDQTKAAALWTLNTVLTEALKLLHPYMPFITEEIY 696 >gi|329121233|ref|ZP_08249860.1| valine--tRNA ligase [Dialister micraerophilus DSM 19965] gi|327470167|gb|EGF15630.1| valine--tRNA ligase [Dialister micraerophilus DSM 19965] Length = 906 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 75/268 (27%), Positives = 126/268 (47%), Gaps = 19/268 (7%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 KI DP ++ W + +T G+ + + K +++P V G DI+ F W A Sbjct: 466 KINQDPD-VLDTWFSSALWPFSTMGWPEKTETLK-QWYPTSTMVTGYDIIFF----WVAR 519 Query: 279 LLSANLP----LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++ ++ +P K VF HG + +G K+SKSLGN IDP+EVIE+ G DALR+ LV Sbjct: 520 MMFMSMEFMHEIPFKYVFIHGLVRDSQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTG 579 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESIL 391 G D + + ++ N + AN + N ++ M L +YD IP + +D+ IL Sbjct: 580 NTPGNDMRFYYERVEG--NRNFANKLWN-ATKFTLMNLDNYDKNFIPEEKDYALADKWIL 636 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449 ++ + + N+ + A + + D Y + K + DR T Y Sbjct: 637 EKLAKTEEFVSRNLDKYELGEAADSIYNFAWNCFCDWYIETAKSRLYAEHCRDRQVT-QY 695 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477 V V + ++ LL F+P + ++ L Sbjct: 696 VLVYTLTRMLALLHPFMPFITEHLWQHL 723 Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 25/164 (15%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S + PN Q H+GHA + + D+L R+ R+ G +V++ G D G K+ K Sbjct: 64 SIVLPPPNVTGQLHMGHALDGTLQDILIRYKRMQGYNVMWLPGKDHAGIATQVKVEKQIA 123 Query: 64 NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G+T + + + + R + D + + F T + R Sbjct: 124 KEGLTKYDLGREKFLERVWQWKEKYGNTIGKQIRKLGSSCDWTRERF--TMDDVCAKAVR 181 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150 ++ + +KG IY+G + R + +D EV ++ DG+ Y Sbjct: 182 EVFITLYEKGLIYRGFRITNWCPRCQTALSDIEVEHENEDGKLY 225 >gi|193794320|gb|ACF21372.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794424|gb|ACF21424.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794430|gb|ACF21427.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRTLLDAVEAGFASVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166 >gi|268609037|ref|ZP_06142764.1| valyl-tRNA synthetase [Ruminococcus flavefaciens FD-1] Length = 872 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 10/252 (3%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-K 288 W + +T G+ +N + K F+P + V G DI+ F I L +P Sbjct: 451 TWFSSALWPFSTLGWPENTEDLKY-FYPTNTLVTGYDIIFFWVIRMMFSGLENMGKVPFD 509 Query: 289 KVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 V HG + +G K+SKSLGN IDP+EVI E G DALR+ L + G D Y D +K Sbjct: 510 TVLIHGLVRDAQGRKMSKSLGNGIDPLEVINEYGADALRFMLATGNSPGNDMRYIDDKVK 569 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 N AN + N SR + M L + P D+ +++ +++ +E+ EN+ Sbjct: 570 AARN--FANKLWN-ASRFIMMNLPEDFEFKGLPSDLELEDKWLVNKFNQLAKEVNENLDK 626 Query: 408 QLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465 + A ++ + +V D Y + KP + + + V V ++ + LL F Sbjct: 627 YELGVASQKIYDFIWDVYCDWYIELTKP--RIQAGGETMAKAQAVLVWAMQGMLKLLHPF 684 Query: 466 VPKLANKIFDIL 477 +P + +I+ +L Sbjct: 685 MPFITEEIWQVL 696 Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 6/65 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN Q H+GHA + + D+L R+ R+ G L+ GTD KI +A + Sbjct: 40 TIVIPPPNITGQLHMGHALDETLQDILIRWKRMSGYSALWLPGTDHAAIATEAKIVEAMR 99 Query: 64 NAGVT 68 GVT Sbjct: 100 KEGVT 104 >gi|323147776|gb|ADX33167.1| MetG [Vibrio vulnificus] gi|323147784|gb|ADX33171.1| MetG [Vibrio vulnificus] gi|323147786|gb|ADX33172.1| MetG [Vibrio vulnificus] gi|323147788|gb|ADX33173.1| MetG [Vibrio vulnificus] gi|323147790|gb|ADX33174.1| MetG [Vibrio vulnificus] gi|323147794|gb|ADX33176.1| MetG [Vibrio vulnificus] gi|323147798|gb|ADX33178.1| MetG [Vibrio vulnificus] gi|323147802|gb|ADX33180.1| MetG [Vibrio vulnificus] gi|323147806|gb|ADX33182.1| MetG [Vibrio vulnificus] gi|323147810|gb|ADX33184.1| MetG [Vibrio vulnificus] gi|323147818|gb|ADX33188.1| MetG [Vibrio vulnificus] gi|323147824|gb|ADX33191.1| MetG [Vibrio vulnificus] gi|323147826|gb|ADX33192.1| MetG [Vibrio vulnificus] Length = 143 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 7/137 (5%) Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-- 259 L+ +SR +G +IP + YVW+DA Y+ + L + D ++W D Sbjct: 1 LQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKDSK 60 Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316 H IGKDI+ FH+++WPA L + P VF HG++ G K+SKS G + Sbjct: 61 TELYHFIGKDIVYFHSLFWPAMLDGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTY 120 Query: 317 IEEVGVDALRYFLVREI 333 +E + + LRY+ ++ Sbjct: 121 LEHLDPECLRYYYAAKL 137 >gi|259047289|ref|ZP_05737690.1| valine--tRNA ligase [Granulicatella adiacens ATCC 49175] gi|259036065|gb|EEW37320.1| valine--tRNA ligase [Granulicatella adiacens ATCC 49175] Length = 880 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 94/200 (47%), Gaps = 20/200 (10%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P + V G DIL F Sbjct: 431 GMEAPSDSENWTQDPDVLDTWFSSALWPFSTMGWPDEDAADYKRYYPTNTLVTGYDILTF 490 Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ L K V HG I +G K+SKSLGN +DP+EVIE+ G DA Sbjct: 491 ----WVSRMMFQGLEFTGKRPFKNVLIHGLIRDSQGRKMSKSLGNGVDPMEVIEQYGADA 546 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAF 383 LR+FL A G+D Y D + N N I N SR M + D + G Sbjct: 547 LRWFLANGSAPGQDVRYSTDKMDAAWN--FINKIWN-ASRYALMNVGDLTADQVDITGEK 603 Query: 384 TESDESILSVCSRVLQEIRE 403 T +D+ IL+ ++ + ++ E Sbjct: 604 TLADKWILTRLNQTIGKVTE 623 Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 79/167 (47%), Gaps = 23/167 (13%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA+++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDVTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLR 99 Query: 64 NAGVT-----TKVFVDQN-------SRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 G++ + F++Q + + R+ + IS D+ R T + D + Sbjct: 100 GEGLSRYDLGREKFLEQTWKWKEEYASHIREQWAKMGISV-DYRRERFTLDNGLSDAVKK 158 Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +KG IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 159 VFVTLYEKGLIYRGEYIINWDPKAKTSLSDIEVIHKDVEGAFYHMNY 205 >gi|313892624|ref|ZP_07826211.1| valine--tRNA ligase [Dialister microaerophilus UPII 345-E] gi|313119021|gb|EFR42226.1| valine--tRNA ligase [Dialister microaerophilus UPII 345-E] Length = 883 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 75/268 (27%), Positives = 126/268 (47%), Gaps = 19/268 (7%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 KI DP ++ W + +T G+ + + K +++P V G DI+ F W A Sbjct: 443 KINQDPD-VLDTWFSSALWPFSTMGWPEKTETLK-QWYPTSTMVTGYDIIFF----WVAR 496 Query: 279 LLSANLP----LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++ ++ +P K VF HG + +G K+SKSLGN IDP+EVIE+ G DALR+ LV Sbjct: 497 MMFMSMEFMHEIPFKYVFIHGLVRDSQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTG 556 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESIL 391 G D + + ++ N + AN + N ++ M L +YD P +T +D+ IL Sbjct: 557 NTPGNDMRFYYERVEG--NRNFANKLWN-ATKFTLMNLDNYDKNFTPEEKDYTLADKWIL 613 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449 ++ + + N+ + A + + D Y + K + DR T Y Sbjct: 614 EKLAKTEEFVSRNLDKYELGEAADSIYNFAWNCFCDWYIETAKSRLYAEHCRDRQVT-QY 672 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477 V V + ++ LL F+P + ++ L Sbjct: 673 VLVYTLTRMLALLHPFMPFITEHLWQHL 700 Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 25/164 (15%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S + PN Q H+GHA + + D+L R+ R+ G +V++ G D G K+ K Sbjct: 41 SIVLPPPNVTGQLHMGHALDGTLQDILIRYKRMQGYNVMWLPGKDHAGIATQVKVEKQIA 100 Query: 64 NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G+T + + + + R + D + + F T + R Sbjct: 101 KEGLTKYDLGREKFLERVWQWKEKYGNTIGKQIRKLGSSCDWTRERF--TMDDVCAKAVR 158 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150 ++ + +KG IY+G + R + +D EV ++ DG+ Y Sbjct: 159 EVFIALYEKGLIYRGFRITNWCPRCQTALSDIEVEHENEDGKLY 202 >gi|87123441|ref|ZP_01079292.1| valyl-tRNA synthetase [Synechococcus sp. RS9917] gi|86169161|gb|EAQ70417.1| valyl-tRNA synthetase [Synechococcus sp. RS9917] Length = 914 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 117/279 (41%), Gaps = 27/279 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ + +++P V G DI+ F + A + + Sbjct: 461 VLDTWFSSGLWPFSTLGWPETGSADLQRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEM 520 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYD 342 P K V+ HG + + K+SKS GN IDP+ +IE G DALR+ LVRE+A G+D D Sbjct: 521 PF-KDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALRFALVREVAGAGQDIRLD 579 Query: 343 KD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PGAFTESDESILSVCS 395 D + A N + + L + G P P A +D ILS + Sbjct: 580 YDRKTDTSATVEAARNFANKLWNATRFALMNLGGETPASLGEPEPAALQLADRWILSRLA 639 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS-------- 445 RV +E E + + A + D Y + K ++ NP A Sbjct: 640 RVNRETAERYSSYGLGEAAKGLYEFAWNDVCDWYLELSK----RRLNPGEAPSPEALADQ 695 Query: 446 -TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 T V V+VI Q+ ++L +P L +++ + A E Sbjct: 696 RTARQVLVKVISQMHLMLHPLMPHLTEELWHSVTGAGET 734 Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 S I PN H+GHA+ + D + RF RL G +VL GTD Sbjct: 39 SVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGRNVLCLPGTD 83 >gi|169334634|ref|ZP_02861827.1| hypothetical protein ANASTE_01037 [Anaerofustis stercorihominis DSM 17244] gi|169259351|gb|EDS73317.1| hypothetical protein ANASTE_01037 [Anaerofustis stercorihominis DSM 17244] Length = 882 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 24/260 (9%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL----- 284 W + +T G+ + K KF+P D+ V G DI+ F W A ++ + + Sbjct: 455 TWFSSALWPFSTLGWPKETEDLK-KFYPNDVLVTGFDIIFF----WVARMVFSGIEQMGE 509 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P V+ HG + +G K+SKSLGN IDP+EVI++ G D LR+ LV G D + + Sbjct: 510 PPFHHVYIHGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADVLRFSLVTGNKAGNDTRWQE 569 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYD----GMIPTPGAFTESDESILSVCSRVLQ 399 K N + AN I N +R + M L+D+D +P +D+ I+S +++++ Sbjct: 570 S--KVEANRNFANKINN-AARFILMNLEDFDENKKADLP---KLHNTDKWIISRTNQMVK 623 Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 E+ N++ A ++ + + D Y + KP L N + Y V Sbjct: 624 EVTANIEKYEFGIAAEKLYTFIWNEFCDLYIEFAKP-SLNSDNKEDRFNTQYTLNLVFMN 682 Query: 458 LAILLQAFVPKLANKIFDIL 477 + +L ++P + I+ + Sbjct: 683 ILKMLHPYMPFITEHIYSFM 702 >gi|210621752|ref|ZP_03292801.1| hypothetical protein CLOHIR_00746 [Clostridium hiranonis DSM 13275] gi|210154634|gb|EEA85640.1| hypothetical protein CLOHIR_00746 [Clostridium hiranonis DSM 13275] Length = 887 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 27/270 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ +N + ++P ++ V G DI+ F + +A + Sbjct: 450 VLDTWFSSALWPFSTLGWPNNTEELNY-YYPTNVLVTGYDIIFFWVV---RMAFAAMFCM 505 Query: 287 PKKVFSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GF 340 +K FSH I +G K+SKSLGN IDP+E+I++ G DALR+ L+ + G D F Sbjct: 506 NEKPFSHVLIHGLVRDSQGRKMSKSLGNGIDPLEIIDQFGADALRFTLITGNSPGNDMRF 565 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-------PTPGAFTESDESILSV 393 Y +RV + A N + + + ++D + T +D+ I+S Sbjct: 566 Y-----MERV--EFARNFANKLWNASRFVFMNWDEEMMNGVTRSDVEANLTLADKWIISR 618 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVT 451 + +++++ NM + AL + SE D Y + KP L + + LY Sbjct: 619 ANNIVKDVTHNMDKFELGMALQKAYDFTWSEYCDWYIEMVKP-RLYGDDVEAKKAALYTL 677 Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVAD 481 V+ + LL F+P + +IFD L A+ Sbjct: 678 TYVLETILKLLHPFIPFITEEIFDHLPTAN 707 >gi|260589301|ref|ZP_05855214.1| valine--tRNA ligase [Blautia hansenii DSM 20583] gi|260540382|gb|EEX20951.1| valine--tRNA ligase [Blautia hansenii DSM 20583] Length = 881 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 21/240 (8%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308 F+P D+ V G DI+ F W ++ + L K H ++H +G K+SKSLG Sbjct: 477 FYPTDVLVTGYDIIFF----WVIRMVFSGLEQTGKTPFHHVLIHGLVRDSQGRKMSKSLG 532 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 N IDP+EVI++ G DALR L+ A G D + + ++ N AN + N SR + M Sbjct: 533 NGIDPLEVIDKYGADALRLTLMTGNAPGNDMRFYWERIEASRN--FANKVWN-ASRFIMM 589 Query: 369 ILKDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423 L+ D IP T +D+ ILS + + +E+ EN+ + A+ +V + E Sbjct: 590 NLEKAD--IPKNIDLQTLTGADKWILSKVNTLAKEVTENLDKYELGIAVQKVYDFIWEEF 647 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 D Y + KP L + L+ V+ LL ++P + +I+ L +E+ Sbjct: 648 CDWYIEMVKP-RLYNDEDTTKAAALWTLKTVLSNALKLLHPYMPFITEEIYCTLCPEEES 706 Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Query: 4 REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 R+K + + PN Q H+GHA + + D+L RF R+ G + L+ GTD Sbjct: 34 RDKKPFTIVMPPPNVTGQLHMGHALDETMQDILIRFKRMQGYEALWQPGTD 84 >gi|37522488|ref|NP_925865.1| valyl-tRNA synthetase [Gloeobacter violaceus PCC 7421] gi|81708049|sp|Q7NCQ9|SYV_GLOVI RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|35213489|dbj|BAC90860.1| valyl-tRNA synthetase [Gloeobacter violaceus PCC 7421] Length = 897 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 73/288 (25%), Positives = 133/288 (46%), Gaps = 27/288 (9%) Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266 +++R+ + +++ D Q ++ W + TT G+ D + F+P L G D Sbjct: 437 FAVARERYGPDVQLQRD-QDVLDTWFSSSLWPFTTLGWPDQTE-DLGVFYPNALMSTGFD 494 Query: 267 ILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEE 319 I+ +W A + + +P + V+ +G + KG+K+SK+ GN IDPIE++++ Sbjct: 495 II----FFWVARMAMMAGEFTGQIPF-ETVYINGLVRDEKGQKMSKTKGNGIDPIEMMDK 549 Query: 320 VGVDALRYFLVREI-ACGKDGFYDKDGLKKRVNA-DLANGIGNLVSRSVSMILKDYDGMI 377 G DALRY LVRE+ G+D +D + A D + N + + +L + D + Sbjct: 550 YGTDALRYTLVREVTGAGQDVRFDYNRKTGESGAVDASKRFANKIWNASRFVLMNLDELT 609 Query: 378 PT------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429 P PG+ T D IL + ++I E + + A + + + D Y + Sbjct: 610 PAALGAADPGSLTLEDRWILGRLGQTARQIDELLGRYALGEAARSLYEFIWDDFCDWYVE 669 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 KP L+ R + V V+ + LL ++P L+ +I+ +L Sbjct: 670 LAKP-RLEALETRRGAQ--QVLAAVLDRTLRLLHPWMPHLSEEIWQLL 714 >gi|160947447|ref|ZP_02094614.1| hypothetical protein PEPMIC_01381 [Parvimonas micra ATCC 33270] gi|158446581|gb|EDP23576.1| hypothetical protein PEPMIC_01381 [Parvimonas micra ATCC 33270] Length = 875 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 77/253 (30%), Positives = 118/253 (46%), Gaps = 11/253 (4%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP-AFLLSANLPLPK 288 W + +T G+ D + K F+P + V G DIL F I + L + N + Sbjct: 447 TWFSSALWPFSTLGWPDKTEDLKY-FFPTNTLVTGYDILFFWVIRMVFSSLYNLNEVPFR 505 Query: 289 KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGL 346 V+ G I + G K+SKSLGN IDPIE+I++ G DALR+ LV G D FY+K Sbjct: 506 NVYFTGLIRDELGRKMSKSLGNGIDPIEIIDKYGADALRFTLVGGNTPGNDMRFYEK--- 562 Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 + N + AN + N SR V M L D + D+ IL+ +R ++E+ EN+ Sbjct: 563 RVESNRNFANKLWN-ASRFVLMNLNDEEIYDIDLNKIEIEDKWILTRLNRTIEELTENLS 621 Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 A +++ + D Y + K L N + V V V V+ + LL Sbjct: 622 KFEFGLASSKIYDFIWNEFCDWYIEFSKT-RLYGDNLGKKIVVKSVLVYVLNNILKLLHP 680 Query: 465 FVPKLANKIFDIL 477 F+P + +I+ + Sbjct: 681 FMPFITEEIYSFM 693 Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSR 78 H+GHA I D+L R+ R+ G + L+ GTD A + A V K+ D NS+ Sbjct: 52 HLGHALNNTIQDILIRWKRMSGYEALWVPGTDH-----ASISTEAKVVEKIKKDGNSK 104 >gi|260437219|ref|ZP_05791035.1| valine--tRNA ligase [Butyrivibrio crossotus DSM 2876] gi|292810532|gb|EFF69737.1| valine--tRNA ligase [Butyrivibrio crossotus DSM 2876] Length = 877 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 99/399 (24%), Positives = 160/399 (40%), Gaps = 73/399 (18%) Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE---------FILP 189 DE K A Y A+ V +E EG ++ + + + Y H F+ Sbjct: 305 DEYEKYAGLDRYEARKAIVADLEAEGALVKIEPHDHNVGTCYRCHTTVEPRVSKQWFVKM 364 Query: 190 IERRNEVISFVKSG-------------------LKDLSLSRKTFDWGIKIP--------- 221 E I VKSG +KD +SR+ + WG +IP Sbjct: 365 EELAGPAIEAVKSGKTRFVPEHFDKTYYHWLENIKDWCISRQLW-WGHRIPAFYCDCCNE 423 Query: 222 -------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADL 260 DP + W + +T G+ PD ++ F+P Sbjct: 424 VVVTKENKAVCPKCGKEMRQDPD-TLDTWFSSALWPFSTLGW---PDKTEELDYFYPTST 479 Query: 261 HVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVI 317 V G DI+ F I + + P + HG + +G K+SKSLGN IDP+EVI Sbjct: 480 LVTGYDIIFFWVIRMMFSGIEHTGKAPF-NTILIHGLVRDSQGRKMSKSLGNGIDPLEVI 538 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377 ++ G DALR L+ A G D + + ++ N AN + N SR + M L + Sbjct: 539 DKYGADALRLTLITGNAPGNDMRFYWERVESSRN--FANKVWN-ASRFIMMNLDKAEVRD 595 Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWE 435 T++D+ ILS + + +++ +NM+N + A+ ++ + E D Y + KP Sbjct: 596 VDVTELTDADKWILSKVNTLAKDVTDNMENYDLGVAVQKIYDFIWEEFCDWYIEMVKP-R 654 Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 L + + LY V+ LL ++P + +IF Sbjct: 655 LWNDDDTTKAAALYTLKTVLINSLKLLHPYMPFITEEIF 693 Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +R K + + PN Q H+GHA + + D+L RF R+ G L+ GTD A Sbjct: 32 DRSKKPFTIVMPPPNITGQLHMGHALDNTLQDILIRFKRMQGYSALWVPGTDH-----AS 86 Query: 61 AAQNAGVTTKV 71 A A V K+ Sbjct: 87 IATEAKVVEKI 97 >gi|293401447|ref|ZP_06645590.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305085|gb|EFE46331.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 874 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 86/307 (28%), Positives = 137/307 (44%), Gaps = 46/307 (14%) Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQY---------IMYVWIDALTNY 238 ++D +SR+ + WG +IP +DPQ ++ W + Sbjct: 398 ENIEDWCISRQLW-WGHRIPAWYHKETNEIYVGMEDPQDQENWKQDEDVLDTWFSSALWP 456 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFS 292 +T G+ +N D A+++P DL V G DI+ F W A + N P K V Sbjct: 457 FSTLGWPENTD-DLARYFPNDLLVTGYDIIFF----WVARMAFQTRYCMKNRPF-KDVLI 510 Query: 293 HGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 HG + +G K+SKSLGN IDP++VI+ GVDALR+FL G+D Y + ++ N Sbjct: 511 HGLVRDPQGRKMSKSLGNGIDPMDVIDHFGVDALRFFLTTNSTPGQDLRYSDEKVEASWN 570 Query: 352 ADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 N I N SR M L D + I A + D+ IL + VL + ENM+ Sbjct: 571 --FINKIWN-ASRFALMQLGDAFHLEDIDVSNA-SMIDKWILKRFNEVLGNVTENMEKYE 626 Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 ++ + V + Y + K L+ + + V V+R + +L F+P Sbjct: 627 FALVGNELYNFVWDDFCSWYIELSKA-GLQSADATVVTAARSTLVIVLRGIVRMLHPFMP 685 Query: 468 KLANKIF 474 ++ +I+ Sbjct: 686 FVSEEIY 692 Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 11/55 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75 H+GHA++ + D++AR+ RL G D+L+ G D +AG+ T+ VD+ Sbjct: 52 HLGHAWDTTLQDIVARYKRLQGYDMLWLPGMD-----------HAGIATQAKVDE 95 >gi|269866487|ref|XP_002652290.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348] gi|220062801|gb|EED41766.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348] Length = 315 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 77/313 (24%), Positives = 139/313 (44%), Gaps = 45/313 (14%) Query: 5 EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +K+++++A+ Y QPH+G+ ++ ADV +RF R G DV++ +GTDE+G I A+ Sbjct: 10 KKVFVTSALPYVINQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD----- 118 T + V +N +++ D ++ +D F T +HH+ + ++ K D D Sbjct: 70 KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIFLKTIDHFDEKEIN 129 Query: 119 ---------------IYKGCYSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPVQ 158 I C G + D+ Y+ D + + + + + P Q Sbjct: 130 QMFCPKCKQFLADRYIEGECACGATTHGDQCDTCGRYHEDSQ--ELTNFRCSICKTTP-Q 186 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWG 217 + FF L ++L Y+++ R +++K L ++RK WG Sbjct: 187 IKTTKQLFFNL----NELQHYFQTMDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWG 242 Query: 218 IKIP----DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKF-WPAD---LHVIGKDIL 268 + +P DD + YVW DA YL+ L++ G+ F W + +GKD + Sbjct: 243 VPVPLKEYDDK--VFYVWYDAPIGYLSFLQQKLESDQGTSDVFEWLKGSKWVLFMGKDNV 300 Query: 269 RFHAIYWPAFLLS 281 FH+I +P L + Sbjct: 301 PFHSIIFPCILYA 313 >gi|193794412|gb|ACF21418.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GRIPEPAELEDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166 >gi|269468704|gb|EEZ80333.1| methionyl-tRNA synthetase [uncultured SUP05 cluster bacterium] Length = 133 Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 1/99 (1%) Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320 H IGKDI+ FHA++WPA L+ A+ +F+HGF+ G+K+SKS G I +E + Sbjct: 29 HFIGKDIVYFHALFWPAMLMGADYRTRNAIFAHGFVTVNGQKMSKSRGTFIQARTYLESL 88 Query: 321 GVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGI 358 + LRY+ +++ D + + K+RVN+DL + Sbjct: 89 NPECLRYYYAYKLSAKIDDIDLNLEDFKQRVNSDLVGKV 127 >gi|209528060|ref|ZP_03276539.1| methionyl-tRNA synthetase [Arthrospira maxima CS-328] gi|209491516|gb|EDZ91892.1| methionyl-tRNA synthetase [Arthrospira maxima CS-328] Length = 83 Score = 77.0 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 35/74 (47%), Positives = 48/74 (64%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K ++ ++T + Y N PHIG AY I AD +AR+ RL G +VL TGTDEHGQKI + Sbjct: 6 KTKKTFSLTTPLYYVNDVPHIGSAYTTIAADAIARWKRLQGYEVLLITGTDEHGQKIQRT 65 Query: 62 AQNAGVTTKVFVDQ 75 A+ AG + +V D+ Sbjct: 66 AEEAGCSPQVHCDR 79 >gi|302338655|ref|YP_003803861.1| valyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] gi|301635840|gb|ADK81267.1| valyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] Length = 881 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 100/420 (23%), Positives = 178/420 (42%), Gaps = 65/420 (15%) Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 +L+ E Y D+ + G Y +M E+ +F R+ + DK L+ +E Sbjct: 327 ALKAEGVYIGDKEHLHQVGHCYRCDTVIEPYMSEQ-WFVRMKSLADKALAAWEKDEVRFY 385 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY-------- 226 P + N S++K+ ++D +SR+ + WG +IP +DP Sbjct: 386 PKKWENTYTSWLKN-IRDWCISRQLW-WGHRIPVWYCNDCGQMMVCREDPSTCSACGSSS 443 Query: 227 ------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280 ++ W + +T G+ + + K +F+P V G DI+ +W A ++ Sbjct: 444 LRQDPDVLDTWFSSWLWPFSTLGWPEKSEDLK-RFFPTSSLVTGYDII----FFWVARMI 498 Query: 281 SANLP----LP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 ++L +P + ++ G + K G K+SKSLGN +DP+E+++E G DA+++ L A Sbjct: 499 MSSLEFLGEVPFRDIYITGLVRDKQGRKMSKSLGNGMDPLEIVDEFGADAMKFTLAFLAA 558 Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 G+D KD K + AN I N +R + M L+ + + P D I Sbjct: 559 QGQDILLAKDDFK--FGSKFANKIWN-ATRFLLMNLEGRELLDPESVERKPLDRWIFHRL 615 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK--PWELKKTNPDRASTVLYV 450 + + + M++ + A V D Y +A K + +RA T+L Sbjct: 616 NEASAAVAKAMESYRFNDAANAVYEFFWSDFCDWYIEASKLSLYSDDDDEKNRAVTLLMQ 675 Query: 451 TVEVIRQLAILLQAFVP-----KLANKIFDILFVA---------DEN--RCFQSLDQRLK 494 +E +LA +F+ KL D++ A DE RCF +L + ++ Sbjct: 676 VLEESMRLAHPFLSFITEEIYQKLPGTKGDVITAAYPVWRESRRDEKTARCFSALQELIR 735 >gi|193794390|gb|ACF21407.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G +P P + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQVPEPAELEDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166 >gi|291549332|emb|CBL25594.1| valyl-tRNA synthetase [Ruminococcus torques L2-14] Length = 881 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 74/244 (30%), Positives = 117/244 (47%), Gaps = 18/244 (7%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P D+ V G DI+ F I + + + P V HG + +G K+SKSLGN I Sbjct: 476 FYPTDVLVTGYDIIFFWVIRMVFSGYEHTGKAPF-NTVLIHGLVRDSQGRKMSKSLGNGI 534 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368 DP+E+I++ G DALR L+ A G D FY+ +RV A + AN + N SR + M Sbjct: 535 DPLEIIDKYGADALRLTLITGNAPGNDMRFYN-----ERVEASRNFANKVWN-ASRFILM 588 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 ++ P +D ILS + + +E+ ENM + A+ +V + + D Sbjct: 589 NMEKNVVEEPEDFLLKPADRWILSKVNSLTKEMTENMDKFELGIAVQKVHDFIWDEFCDW 648 Query: 427 YFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 Y + K + + D A+ L+V V+ Q LL F+P + +I+ L +E+ Sbjct: 649 YVEIAK-YRIYHAEEDSQSANCALWVLKTVLGQALKLLHPFMPFITEEIYGALVPEEESL 707 Query: 485 CFQS 488 S Sbjct: 708 MMSS 711 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 +R K +T + PN + H+GHA + + D+L R+ R++G + L+ GTD Sbjct: 33 DRSKKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMEGYNALWIPGTD 84 >gi|325290585|ref|YP_004266766.1| valyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] gi|324965986|gb|ADY56765.1| valyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] Length = 892 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 74/272 (27%), Positives = 122/272 (44%), Gaps = 21/272 (7%) Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276 G + DP ++ W + +T G+ + + K KF+P + V G+DI+ +W Sbjct: 454 GKNLEQDPD-VLDTWFSSALWPFSTMGWPKDAEDLK-KFYPTSVLVTGRDII----FFWV 507 Query: 277 AFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 A ++ + +V H ++H +G K+SKSLGN +DP+EVI+ G D LR+ L+ Sbjct: 508 ARMIFMGMEFMGEVPFHQVMIHGLILDAQGRKMSKSLGNGVDPLEVIDRYGADTLRFTLI 567 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDES 389 G D + + L+ N N I N SR V M L+D+ TPG T +D+ Sbjct: 568 TGNTPGNDLRFHSEKLEASRN--FVNKIWN-ASRFVLMNLEDFAA---TPGGELTLADKW 621 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447 ILS ++ + + + A + + D Y + K + N + T Sbjct: 622 ILSRYDGTVKAVTTALDRFDLGEAARLLYEFIWNEFCDWYIELSKRRLYDRENSEGRHTA 681 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + EV+ LL F+P L +I+ L V Sbjct: 682 QRILREVLEGTMRLLHPFMPFLTEEIWQHLNV 713 Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust. Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 22/124 (17%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTTKVFVDQN 76 H+GHA + + D+LAR+ R+ G D L+ GTD G K+ + G + + + Sbjct: 67 HLGHAMDSTLQDILARYKRMQGYDTLWLPGTDHAGIATQAKVEEKLAEEGTSRQELGREK 126 Query: 77 ----------------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 ++ R + D S + F T + + R ++ K+ ++G IY Sbjct: 127 FLERVWQWKEQYGGKITQQLRRLGASCDWSRERF--TMDAGCSEAVREVFVKLYEQGLIY 184 Query: 121 KGCY 124 +G Y Sbjct: 185 RGNY 188 >gi|254478609|ref|ZP_05091982.1| valyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653] gi|214035463|gb|EEB76164.1| valyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653] Length = 879 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 88/323 (27%), Positives = 147/323 (45%), Gaps = 47/323 (14%) Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDP------------ 224 ER ++ + +KD +SR+ + WG +IP +DP Sbjct: 386 ERFEKIYTNWLENIKDWCISRQLW-WGHRIPAWYCEDCGHVTVSREDPVKCEACGSTNIH 444 Query: 225 --QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 + ++ W + +T G+ + + K F+P D+ V G DI+ F W A ++ Sbjct: 445 QDENVLDTWFSSALWPFSTMGWPEETEDLKY-FYPTDVLVTGYDIIFF----WVARMIFM 499 Query: 283 NLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 +L K+ V HG + G K+SKSLGN IDP+EVIE+ G D LR+ LV A G Sbjct: 500 SLEFMKEIPFKYVLIHGLVRDALGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPG 559 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396 D + + ++ N AN + N SR V + L + D + T +D+ IL+ + Sbjct: 560 NDMRFSWEKVEHSRN--FANKLWN-ASRYVLLNLDENDTNLYIDN-LTLADKWILTRYNN 615 Query: 397 VLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 +++E+ +N++ + A +++ V SE D Y + KP L N + V V Sbjct: 616 IVKEVTDNLEKFELGVAASKLYDFVWSEFCDWYIELSKP-VLYSDNEEAKKVTKSVLRYV 674 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 + LL F+P + +I+ L Sbjct: 675 LDNTLRLLHPFMPFITEEIWQNL 697 >gi|116754239|ref|YP_843357.1| isoleucyl-tRNA synthetase [Methanosaeta thermophila PT] gi|121692931|sp|A0B7P3|SYI_METTP RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|116665690|gb|ABK14717.1| Isoleucyl-tRNA synthetase [Methanosaeta thermophila PT] Length = 1049 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 77/290 (26%), Positives = 133/290 (45%), Gaps = 22/290 (7%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276 ++PD + VW D+ T + + + + +WPAD G D R F++ Sbjct: 516 RVPD----VFDVWFDSAVASWATLNFPRDEEEFRV-WWPADFITEGHDQTRGWFYSQLGA 570 Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 + + P K V HGF L +G K+SKS+GNV+ P +V+E G D LR++++ A Sbjct: 571 SMVAFGRAPY-KSVLMHGFTLDEQGRKMSKSIGNVVHPEDVVERYGADTLRFYVLSSNAP 629 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAF--TESDESILS 392 +D + +G VN + N + N + M+L +D + D I+S Sbjct: 630 WEDLHFSWEGAMN-VNR-MLNILWNAYRFPLPYMVLDRFDISKADTSKYDLRPEDRWIIS 687 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDA---QKPWELKKTNPDRASTVL 448 + + +EI ENM ++HRA + V E + R++ + W ++ +PD+ + Sbjct: 688 RVNSLAKEIEENMSGYMLHRATRSLQEFVLEDLSRWYIQLVRPRTW-IETEDPDKLAA-- 744 Query: 449 YVTV-EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497 Y T+ V+ L L+ F P LA I+ L + +S+ PG+ Sbjct: 745 YATLYNVMSTLVKLMAPFTPFLAESIYQNLVRGLDPSAPESVHMCDWPGY 794 >gi|229100082|ref|ZP_04230989.1| Methionine--tRNA ligase [Bacillus cereus Rock3-29] gi|228683331|gb|EEL37302.1| Methionine--tRNA ligase [Bacillus cereus Rock3-29] Length = 671 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 109/541 (20%), Positives = 214/541 (39%), Gaps = 62/541 (11%) Query: 4 REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++K I+ PN H+GH + AD+L R+ +L G +V + +G D+H + A Sbjct: 123 KKKYLITATPPTPNGDLHVGHLSGPYTGADILTRYLKLKGNEVFYMSGADDHQSYVPFKA 182 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH-DTCRILWKKISDKGDIY- 120 + + D + + +I+ D F++ H + + ++K+ ++G + Sbjct: 183 GQLEKSPRETADHFANEIEKTLRLAEINPDIFVKPHFSTFHIEFVKEFFEKLWNEGKLVE 242 Query: 121 --------KGCYSGWYSLRDEAYYND-----DEVYKGADGQYYNAQH------NPV---- 157 K C Y EAY DE+ G + + NP Sbjct: 243 KEVDILFCKQCDKHLY----EAYVRGNCPHCDELSDGNACEKCGRPNLCIDLLNPTCKCC 298 Query: 158 ----QWMEEEGYFFRLSAYQDKLLSYYES---HPEFILPIERRNEVISFVKSGLKDLSLS 210 + + + FF LS Y+ +L YY+ P ER + L D+ +S Sbjct: 299 GSEPEKSKIKQLFFPLSNYKTQLKQYYKELKIGPHLTALCER------MLDEDLPDIPIS 352 Query: 211 RKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD----LH 261 + DWGI +P + +YVW + YL+ T L N + FW ++ Sbjct: 353 HVS-DWGIPVPVEGYENQTIYVWFEMAPGYLSATNELIQDKNLSYTLRDFWNNQDTTIIN 411 Query: 262 VIGKDILRFHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319 G D FH++ +PA L S ++ LPK + ++ F +G K S S G+ + E++E Sbjct: 412 FFGYDNGYFHSVLFPAIWLAYSEDITLPKTMITNEFYQLEGLKFSTSRGHAVWGKELLEN 471 Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379 D +RY+L + + + V+ +L + + + ++ P Sbjct: 472 ASHDVVRYYLSYSRPETVETNFTMEEFNHIVDTNLNQEWESWLHDLKCKLKAEFPNGAPE 531 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPW-ELK 437 + + +R++ EI + N + + ++++ + + + F A + + + Sbjct: 532 LETLSGNYLMYYQHVNRIVNEIMNAYEPNTFSPQKVVRLLNELVRIAKKFSAGEEFLTVL 591 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI-----FDILFVADENRCFQSLDQR 492 K N R +T + + + + LA+ +P + F++ DE F Q+ Sbjct: 592 KNNQQRRNTAIALELYTAKILALFSSPIMPTFGKMLWGDLGFNVDMQLDEEVSFLPAGQK 651 Query: 493 L 493 + Sbjct: 652 V 652 >gi|227874318|ref|ZP_03992503.1| valine--tRNA ligase [Oribacterium sinus F0268] gi|227839806|gb|EEJ50251.1| valine--tRNA ligase [Oribacterium sinus F0268] Length = 900 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 78/281 (27%), Positives = 126/281 (44%), Gaps = 37/281 (13%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287 W + T G+ + + K F+P D+ V G DI+ F + + + P Sbjct: 452 TWFSSALWPFETLGWPEETEDYKY-FYPTDVLVTGYDIIFFWVVRMVFSGIEQTGKTPF- 509 Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDG 345 KKV HG + +G K+SKSLGN IDP+E+I G DALR L+ A G D FY Sbjct: 510 KKVLIHGLVRDDQGRKMSKSLGNGIDPLEIIGTYGADALRMTLLTGNAPGNDMRFY---- 565 Query: 346 LKKRVNA--DLANGIGNLVSRSVSMILKDYDG-----------------MIPTPGAFTES 386 RV A + N + N SR + M +K+ + + P + Sbjct: 566 -HSRVEASRNFMNKVWN-ASRFLFMNVKEEEKEALLSLVGKKEASLEEVLSVIPKNLALA 623 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA 444 D+ ILS C+ + E+ N+++ + AL ++ + + E D Y + KP L + Sbjct: 624 DQWILSKCNHTVSEVTRNLESFDLGIALDKIQNFIWEEFCDWYIEMVKP-RLYSEGGESK 682 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDI---LFVADE 482 + L+ ++V++ LL F P + +I+D LF +E Sbjct: 683 TLALWTLLKVLKTSLSLLHPFCPFITEEIYDTEKSLFPGEE 723 >gi|167745430|ref|ZP_02417557.1| hypothetical protein ANACAC_00121 [Anaerostipes caccae DSM 14662] gi|167655151|gb|EDR99280.1| hypothetical protein ANACAC_00121 [Anaerostipes caccae DSM 14662] Length = 879 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 100/407 (24%), Positives = 171/407 (42%), Gaps = 79/407 (19%) Query: 137 NDDEVYKGADGQY-----YNAQHNPVQWMEEEGYFFRLSAYQ------DKLLSYYES--H 183 NDD G+Y Y A+ V+ +EE+GY ++ ++ D+ + E Sbjct: 299 NDDATINENGGRYEGMERYEARKAIVKDLEEQGYLVKIKEHEHNVGTHDRCKATIEPMVK 358 Query: 184 PEFILPI-ERRNEVISFVKSG-------------------LKDLSLSRKTFDWGIKIP-- 221 P++ + + E I VK+G ++D +SR+ + WG +IP Sbjct: 359 PQWFVKMDELAKPAIEAVKNGDIKFVPERYTKTYLHWLENIRDWCISRQLW-WGHRIPAY 417 Query: 222 ------------DDPQYI--------------MYVWIDALTNYLTTTGYLDNPDGSKAKF 255 + P+ + W + +T G+ + + F Sbjct: 418 YCDECGETVVAKEKPEVCPKCGCTHFTQDEDTLDTWFSSALWPFSTLGWPEQTE-ELDYF 476 Query: 256 WPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312 +P ++ V G DI+ F + + + + P V HG + KG K+SKSLGN ID Sbjct: 477 YPTNVLVTGYDIIFFWVVRMVFSGYEHTGKAPF-DTVLIHGLVRDDKGRKMSKSLGNGID 535 Query: 313 PIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMI 369 P+EVI + G DALR+ LV A G D FY +RV A + AN + N SR + M Sbjct: 536 PLEVISQYGADALRFTLVTGNAPGNDMRFY-----MERVEASRNFANKVWN-ASRFMMMN 589 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427 + D T +D ILS + + +++ +NM + A+ ++ + E D Y Sbjct: 590 FEQADFSHVELSDLTSADRWILSKFNTLAKDVTDNMDKYELGIAVQKLNDFIWEEFCDWY 649 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + KP L + + L+ +V+ + LL F+P + +I+ Sbjct: 650 IEMVKP-RLYNDEDNTKAAALWTLKKVLSESLKLLHPFMPFITEEIY 695 >gi|194360509|gb|ACF57902.1| methionyl-tRNA synthetase [Actinomyces israelii] Length = 168 Score = 76.6 bits (187), Expect = 9e-12, Method: Composition-based stats. Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G K S S G VI + +E DALRYF+ D + +R N +L Sbjct: 1 FLTMEGRKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ +MI K + G +P PG D ++L + + AL Sbjct: 61 VAGWGNLVNRTATMIHKRF-GAVPAPGGLEPIDAALLDSIEAGFDAVGGLIARHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 A+ + LV E ++Y +P++LK +P +R +T+L+ + + L Sbjct: 120 AEAMRLVGEANKYIADTEPFKLKGQDPATQERLATILHTLAQAVADL 166 >gi|224369188|ref|YP_002603352.1| ValS [Desulfobacterium autotrophicum HRM2] gi|223691905|gb|ACN15188.1| ValS [Desulfobacterium autotrophicum HRM2] Length = 886 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 17/259 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ +N D K F+P + V G DIL F W A ++ + Sbjct: 450 VLDTWFSSALWPFSTMGWPENTDLLKT-FYPTNALVTGFDILFF----WVARMMMMGIHF 504 Query: 285 --PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +P K V+ H + + G+K+SKS GNVIDP++VI+ G DA R+ L A G+D Sbjct: 505 MGEVPFKDVYIHALVRDEHGKKMSKSKGNVIDPLKVIDTYGADAFRFTLAAFAAQGRDVK 564 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ ++ + N + N SR M + + IP + + I+ + + Sbjct: 565 MSEERVEGYRH--FVNKLWN-ASRFALMHVDEQSKTIPLEN-LSPMESWIMERSTATARA 620 Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 ++E ++ + A + + V D + +A+KP +K DR +T V V++ Sbjct: 621 VKEGIEEYRFNEAASAIYQFVWHEFCDWFLEAEKPALYEKEGLDRRNTARAVLARVLQDT 680 Query: 459 AILLQAFVPKLANKIFDIL 477 ++L F+P + +I+ +L Sbjct: 681 VVMLHPFMPFVTEEIWHML 699 Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 13/74 (17%) Query: 5 EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 EK S I PN H+GHA + + D++ RF RL G +VL+ GTD Sbjct: 36 EKRPYSIVIPPPNVTGVLHMGHALNITVQDIMCRFRRLMGDNVLWMPGTD---------- 85 Query: 63 QNAGVTTKVFVDQN 76 +AG+ T+ V++N Sbjct: 86 -HAGIATQNVVERN 98 >gi|220928627|ref|YP_002505536.1| valyl-tRNA synthetase [Clostridium cellulolyticum H10] gi|219998955|gb|ACL75556.1| valyl-tRNA synthetase [Clostridium cellulolyticum H10] Length = 883 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 76/265 (28%), Positives = 127/265 (47%), Gaps = 19/265 (7%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 +I DP + W + +T G+ + + + F+P D+ V G DI+ F W A Sbjct: 444 RIEQDPD-TLDTWFSSALWPFSTLGWPEKTEDLEY-FYPTDVLVTGYDIIFF----WVAR 497 Query: 279 LLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++ + + K+ VF HG + +G K+SKSLGN IDP+EVI + G DALR+ L Sbjct: 498 MIFSGVEHMKQEPFKYVFIHGIVRDSQGRKMSKSLGNGIDPLEVIAQYGTDALRFALTIG 557 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESIL 391 + G D + + ++ N AN + N SR V M ++ D F+ +D+ I+ Sbjct: 558 NSPGNDLRFSPEKVESARN--FANKVWN-ASRFVLMNFDENLDFSKVDKKKFSIADKWIM 614 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449 S + V +E+ EN++ + L +V + E D Y + KP + + R Y Sbjct: 615 SRINTVTKEVSENIEKFELGLGLQKVYDFIWEEFCDWYIEMVKPKLYDRESEGRLEA-QY 673 Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474 V V+R LL ++P + +I+ Sbjct: 674 VLNFVLRNAMKLLHPYMPFVTEEIY 698 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 24/142 (16%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56 ++ K + I PN Q H+GHA + + D+L R R+ G L+ GTD Sbjct: 35 DKNKKPFTIVIPPPNITGQLHMGHALDNTLQDILIRTKRMQGYSALWLPGTDHASIATEA 94 Query: 57 KIAKAAQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100 KI A G++ KV+ + + + D + F T ++ Sbjct: 95 KIVDAMAKEGISKDMLGREKFLEKAWEWKKVYGGRIVEQLKKLGSSCDWERERF--TMDE 152 Query: 101 RHHDTCRILWKKISDKGDIYKG 122 + ++ K+ DKG IYKG Sbjct: 153 GLSRAVQEVFLKLYDKGLIYKG 174 >gi|327295849|ref|XP_003232619.1| leucyl-tRNA synthetase [Trichophyton rubrum CBS 118892] gi|326464930|gb|EGD90383.1| leucyl-tRNA synthetase [Trichophyton rubrum CBS 118892] Length = 973 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 39/280 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y+ YP+ H+GH I+DVLARF+++ G DVL G D G AA Sbjct: 74 KEKTYVLPMFPYPSGTLHMGHVRVYTISDVLARFNQMKGYDVLHPMGWDAFGLPAENAAI 133 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+ + + +QN N R+ L I + D ++T + + L+ + +KG Y+ Sbjct: 134 ERGIHPEGWTNQNITNMRNQLKDLGIRFDWDTEVKTCSPEFYKHTQKLFLMLHEKGLAYQ 193 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177 Y D+ +++V A+ V+ E + +FFR++A+++ LL Sbjct: 194 AEAVVNYDPVDKTVLANEQVDSNGCSWRSGAK---VEKRELKQWFFRITAFKEALLKDLD 250 Query: 178 SYYESHPEFILPIER------RNEVISFVKSGLKDLSLSRKTFDWGI--KIPDDPQYIMY 229 S S P+ IL ++R R ++ F LS+ +T D + PD + Y Sbjct: 251 SLSGSWPDRILTMQRHWLGKSRGALVPFT------LSIPGETLDIEVFTTRPDTLHGVQY 304 Query: 230 VWIDA--------------LTNYLTTTGYLDNPDGSKAKF 255 + + L ++ +TG L P +KA F Sbjct: 305 IALSTSHPVVKKMAANTPELQKFINSTGSL--PPETKAGF 342 Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 14/189 (7%) Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD---GLKK------RVN 351 EK+SKS N +DP I+ G DA R ++ + +D+ G+++ + Sbjct: 672 EKMSKSKYNGVDPNTCIKSYGADATRAHVLFSAPVSEVLEWDETKIVGIQRWFSRIWKAV 731 Query: 352 ADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410 D N + S L +GM +P G TE++ ++L + + + + ++ Sbjct: 732 EDTGNSLKRANFSSAPDALLSLNGMALPPLGKLTETESNLLLMTNNTISSVSYCLEKN-- 789 Query: 411 HRALAQVIS-LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV-IRQLAILLQAFVPK 468 L VIS L+ + Q P E KT+ ++ T L+ T+ + + L +L P Sbjct: 790 QYGLNTVISDLIKLTNAIAAVQLPEESSKTSSAQSLTSLHTTLYISLNSLLRMLAPIAPA 849 Query: 469 LANKIFDIL 477 A++ +++L Sbjct: 850 FASECWEVL 858 >gi|14521127|ref|NP_126602.1| isoleucyl-tRNA synthetase [Pyrococcus abyssi GE5] gi|11135009|sp|Q9V072|SYI_PYRAB RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|5458344|emb|CAB49833.1| ileS isoleucyl-tRNA synthetase [Pyrococcus abyssi GE5] Length = 1067 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 133/261 (50%), Gaps = 14/261 (5%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD-ILRFHAIYWPAFLLSANLP 285 ++ VW D+ + GY N + + K WPAD V G+D + ++ A +++ + Sbjct: 549 VVDVWFDSGIASWASLGYPRNKELFE-KLWPADFIVEGEDQVTKWFYSQQAASIVAFDTV 607 Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 ++V HG++L KG+K+SKSLGN+I P EV+E G D R++++ ++ + Sbjct: 608 PYRRVAMHGYVLDEKGDKMSKSLGNIIRPEEVVERAGRDTFRFYMLWATNPWENLKFSWK 667 Query: 345 GLKKRVNADLANGIGNL-VSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQEI 401 G+++ + N + N+ V S M L ++D + P F E D+ ILS + ++ E+ Sbjct: 668 GVEQ--VRRMLNILWNVYVLASTYMSLDNFDPRKLNPDELPFREEDKWILSRVNSLISEV 725 Query: 402 RENMQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDRASTVLYVTVEVIRQ 457 +++ + +A + + V E + R++ ++ W ++ +PD+ + Y +V Sbjct: 726 ENGIESFYLTKATRALYNFVVEDLSRWYVRLIRKRLW-VEGEDPDKLAA-YYTLWKVFDV 783 Query: 458 LAILLQAFVPKLANKIFDILF 478 L LL F P +A +I+ L Sbjct: 784 LLRLLAPFTPYIAEEIYQNLI 804 Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AK 60 K+ K Y Y + H+G A+ II D++ RF + G +V G D HG I K Sbjct: 37 KDGPKYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVWRQPGYDMHGLPIEVK 96 Query: 61 AAQNAGVTTKVFVDQN 76 Q G+ TK +++ Sbjct: 97 VEQALGLKTKKEIEEK 112 >gi|237736331|ref|ZP_04566812.1| leucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] gi|229421679|gb|EEO36726.1| leucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] Length = 869 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 11/196 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + YP+ + H+GHA I DV+AR+ R+ G +VL G D G AA Sbjct: 32 KENYYVLVMLPYPSGKLHVGHARNYTIGDVIARYKRMKGYNVLNPMGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120 G V+ N N R +L SY D I + ++ + ++K++ +KG IY Sbjct: 92 QNGAHPAVWTKSNIENMRRQLKLLGFSYDWDREIASYTPEYYKWNQWMFKRLYEKGLIYK 151 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K W + N+ + DG+ + V E E +FF+++ Y D+LL + Sbjct: 152 KKSLVNWCPDCNTVLANE----QVEDGKCWRHSKTSVIQKELEQWFFKITDYADELLEGH 207 Query: 181 ----ESHPEFILPIER 192 + PE +L +++ Sbjct: 208 KELKDGWPEKVLTMQK 223 Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust. Identities = 42/206 (20%), Positives = 98/206 (47%), Gaps = 23/206 (11%) Query: 278 FLLSANLPLP-KKVFSHGF---ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 FL S+ + + +K FS + K EK+SKS N +DP E+I + G D R F++ Sbjct: 593 FLFSSEVDVKGEKAFSKATGEELAIKVEKMSKSKNNGVDPEEMITKYGADTTRLFIMFAA 652 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE---SDESI 390 K+ ++++GL G +++ ++++ + + T+ D+++ Sbjct: 653 PPEKELEWNENGLA---------GAYRFLTKIWRLVMEHKENLEFGEIDLTKVSRDDKAL 703 Query: 391 LSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 L ++ ++++ E++++ + ++A + L++E Y E KT + Sbjct: 704 LIKLNQTIKKVTESIEDDYHFNTSIAATMELINETQDY--KVNILEGGKTTSESKK---- 757 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475 + EVI+ + ++L F P +++++ Sbjct: 758 IFAEVIKNILVMLSPFTPHFCDELWE 783 >gi|42522066|ref|NP_967446.1| hypothetical protein Bd0458 [Bdellovibrio bacteriovorus HD100] gi|81618454|sp|Q6MQK8|SYV_BDEBA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|39574597|emb|CAE78439.1| valS [Bdellovibrio bacteriovorus HD100] Length = 894 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 69/267 (25%), Positives = 118/267 (44%), Gaps = 27/267 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + + K F+P V G DI+ F W A ++ L Sbjct: 451 VLDTWFSSALWPFSTMGWPNETETLKT-FYPTSYLVTGHDIIFF----WVARMIMMGLEF 505 Query: 287 PK-----KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V+ HG + +G K+SKSLGN IDP+E+IE+ G DALR+ + GKD Sbjct: 506 QRDVPFRTVYIHGLVRDSQGRKMSKSLGNSIDPVEMIEKHGADALRFTFAAHLYSGKDFK 565 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--------FTESDESILS 392 + + L+ N N + N ++S L D+ PT G + D+ I++ Sbjct: 566 FSEQRLEGYRN--FMNKVWNAARFALSN-LSDFKA--PTEGVKALPNKVHISVFDQWIIT 620 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYV 450 V + + E M+ + A + + D Y + KP L N + + V Sbjct: 621 KLEEVTKTVEEAMEQERFSDASTALYQFIWNQFCDWYIEFTKP-ILNGNNAEEKAATQLV 679 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477 +V+ ++ LL F P ++ +I+ L Sbjct: 680 IAQVLNRIMRLLHPFAPFISEEIYQKL 706 >gi|58337105|ref|YP_193690.1| valyl-tRNA synthetase [Lactobacillus acidophilus NCFM] gi|81311486|sp|Q5FKW5|SYV_LACAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|58254422|gb|AAV42659.1| valine-tRNA ligase [Lactobacillus acidophilus NCFM] Length = 879 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 41/269 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+L +S + ER + ++ + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLENQKSEGKVNFVPERFEQTLNHWMENVHDWVISRQLW-WGHRIPAWY 418 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D + +++P + Sbjct: 419 NKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTMGWPDTDNPDFKRYFPTNA 477 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPI 314 V G DI+ F W + ++ +L K+ V HG I +G K+SKSLGN IDP+ Sbjct: 478 LVTGYDIIFF----WVSRMIFQSLHFTKERPFKDVVLHGLIRDEQGRKMSKSLGNGIDPM 533 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372 +VI++ G DALR+FL+ A G+D + + N N I N VSR V M L + Sbjct: 534 DVIDKYGADALRWFLLNGTAPGQDTRFSYTKMDAAWN--FINKIWN-VSRFVIMNLPEDA 590 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F SD+ I + + E+ Sbjct: 591 KPAHMPDTSKFDLSDKWIFDRLNHTIGEV 619 Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L RF R++G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMEGYDTLYLPGMDHAGIATQAKVEAKLR 98 Query: 64 NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G + + FV Q + + LD S + F T +K + Sbjct: 99 KQGKDRHEMGREAFVKQVWDWKDEYANIIKSQWSKLGLSLDYSRERF--TLDKGLSKAVK 156 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ ++G IY+G Y W + A + + ++K G +Y+ ++ Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPTLETALSDIEVIHKDDKGAFYHVKY 204 >gi|224540962|ref|ZP_03681501.1| hypothetical protein CATMIT_00113 [Catenibacterium mitsuokai DSM 15897] gi|224526113|gb|EEF95218.1| hypothetical protein CATMIT_00113 [Catenibacterium mitsuokai DSM 15897] Length = 874 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 86/344 (25%), Positives = 148/344 (43%), Gaps = 45/344 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ + L E+ ER + S + ++D +SR+ + WG +IP Sbjct: 360 WFVKMKPLAENALKNQETDDRVDFVPERFEKTFSNWMNNIEDWCISRQVW-WGHRIPAWY 418 Query: 222 -----------DDPQYI---------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 + P+ I + W + +T G+ + D +++P D Sbjct: 419 NNETGELYVGREAPEDIENWTQDEDVLDTWFSSALWPFSTMGWPNTEDPMFKRYFPTDTL 478 Query: 262 VIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318 V G DI+ F + + + + P K V HG I +G K+SKSLGN +DP++VI+ Sbjct: 479 VTGYDIIFFWVSRMMFQSIEFTGRRPF-KNVLIHGLIRDEQGRKMSKSLGNGVDPMDVID 537 Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 E G D+LR+FL+ + G D Y LK N N I N + I +D Sbjct: 538 EYGADSLRWFLLNNSSPGADMRYVPAKLKSTWN--FINKIWNSARYVLMNIDEDQQLEEL 595 Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY-FDAQKPW--E 435 +D+ IL+ + V++ + ENM + I++ +E+ R+ +D W E Sbjct: 596 DYATLNLADKWILNRLNEVIRNVDENMDK-------FEFINVGTELYRFIWDDFCSWYIE 648 Query: 436 LKK---TNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIF 474 L K T D + + L V V+ + LL +P + +I+ Sbjct: 649 LSKLHLTGDDEVAKKSALNTLVYVLNTIVRLLHPIMPFVTEEIY 692 Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 24/135 (17%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R+ R+ G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTMQDMIIRYKRMQGYDALWLPGMDHAGLATQAKVEARLR 98 Query: 64 NAGVT-----TKVFVDQNSRNFRDMADV-----------LDISYDDFIRTTEKRHHDTCR 107 G++ + VD+ + AD+ LD S + F T ++ D R Sbjct: 99 EQGISRYDLGREKLVDKIWEWKEEYADIIRAQWAKLGLSLDYSKERF--TFDEGLSDAVR 156 Query: 108 ILWKKISDKGDIYKG 122 ++ ++ +KG IY+G Sbjct: 157 EVFVRLYEKGLIYQG 171 >gi|193794388|gb|ACF21406.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794414|gb|ACF21419.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794468|gb|ACF21446.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + ++ DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166 >gi|193794426|gb|ACF21425.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794436|gb|ACF21430.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794442|gb|ACF21433.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + ++ DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAVEAGFTSVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166 >gi|24372757|ref|NP_716799.1| leucyl-tRNA synthetase [Shewanella oneidensis MR-1] gi|32171553|sp|Q8EHP4|SYL_SHEON RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|24346832|gb|AAN54244.1|AE015561_4 leucyl-tRNA synthetase [Shewanella oneidensis MR-1] Length = 859 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 66/242 (27%), Positives = 108/242 (44%), Gaps = 17/242 (7%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + +EK Y + YP+ + H+GH I DV+ARF RL G +VL G D G A Sbjct: 30 QNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENA 89 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A N + QN ++ +L YD I T ++ + + K+ +KG + Sbjct: 90 AINNKTAPAPWTYQNIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLV 149 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178 YK S + DE +++V DG + PV+ E +F +++AY ++LL+ Sbjct: 150 YKKTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLND 205 Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 + PE + ++R R+E + ++ S K+FD PD + YV I Sbjct: 206 IDTLDGWPEQVKTMQRNWIGRSEGVEMTFG----VAGSDKSFDIYTTRPDTLMGVTYVAI 261 Query: 233 DA 234 A Sbjct: 262 AA 263 >gi|323694557|ref|ZP_08108723.1| valine-tRNA ligase [Clostridium symbiosum WAL-14673] gi|323501325|gb|EGB17221.1| valine-tRNA ligase [Clostridium symbiosum WAL-14673] Length = 879 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 22/231 (9%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308 F+P D+ V G DI+ F W ++ + L K H ++H +G K+SKSLG Sbjct: 475 FYPTDVLVTGYDIIFF----WVIRMVFSGLEQTGKEPFHTVLIHGLVRDSQGRKMSKSLG 530 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRS 365 N IDP+EVI++ G DALR L+ A G D FY +RV A + AN + N +R Sbjct: 531 NGIDPLEVIDKYGADALRMTLMTGNAPGNDMRFY-----WERVEASRNFANKVWN-ATRF 584 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423 + M ++ + T +D ILS + + +++ ENM + AL +V + E Sbjct: 585 IMMNIEKAPDADVSLSDLTMADRWILSKVNTLAKDVTENMDRYELGIALQKVYDFIWEEF 644 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 D Y + KP + +A+ + + +I L LL ++P + +IF Sbjct: 645 CDWYIEMVKPRLWDDNDTTKAAALWTLKTVLINSLK-LLHPYMPFITEEIF 694 Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 PN Q H+GHA + + D+L R+ R+ G + L+ GTD Sbjct: 45 PNITGQLHMGHALDNTMQDILIRYKRMQGFEALWQPGTD 83 >gi|323487048|ref|ZP_08092357.1| hypothetical protein HMPREF9474_04108 [Clostridium symbiosum WAL-14163] gi|323399639|gb|EGA92028.1| hypothetical protein HMPREF9474_04108 [Clostridium symbiosum WAL-14163] Length = 879 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 22/231 (9%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308 F+P D+ V G DI+ F W ++ + L K H ++H +G K+SKSLG Sbjct: 475 FYPTDVLVTGYDIIFF----WVIRMVFSGLEQTGKEPFHTVLIHGLVRDSQGRKMSKSLG 530 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRS 365 N IDP+EVI++ G DALR L+ A G D FY +RV A + AN + N +R Sbjct: 531 NGIDPLEVIDKYGADALRMTLMTGNAPGNDMRFY-----WERVEASRNFANKVWN-ATRF 584 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423 + M ++ + T +D ILS + + +++ ENM + AL +V + E Sbjct: 585 IMMNIEKAPDADVSLSDLTMADRWILSKVNTLAKDVTENMDRYELGIALQKVYDFIWEEF 644 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 D Y + KP + +A+ + + +I L LL ++P + +IF Sbjct: 645 CDWYIEMVKPRLWDDNDTTKAAALWTLKTVLINSLK-LLHPYMPFITEEIF 694 Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 PN Q H+GHA + + D+L R+ R+ G + L+ GTD Sbjct: 45 PNITGQLHMGHALDNTMQDILIRYKRMQGFEALWQPGTD 83 >gi|229019683|ref|ZP_04176490.1| Valyl-tRNA synthetase [Bacillus cereus AH1273] gi|229175140|ref|ZP_04302656.1| Valyl-tRNA synthetase [Bacillus cereus MM3] gi|228608276|gb|EEK65582.1| Valyl-tRNA synthetase [Bacillus cereus MM3] gi|228741590|gb|EEL91783.1| Valyl-tRNA synthetase [Bacillus cereus AH1273] Length = 881 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 88/349 (25%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K + + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAVELQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 -------------DDPQYI---------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 D P I + W + +T G+ D +++ D Sbjct: 422 WYHKETGEVYVGTDAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+RYFL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T ++ D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|20091262|ref|NP_617337.1| isoleucyl-tRNA synthetase [Methanosarcina acetivorans C2A] gi|74530882|sp|Q8TN62|SYI_METAC RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|19916383|gb|AAM05817.1| isoleucyl-tRNA synthetase [Methanosarcina acetivorans C2A] Length = 1058 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 74/263 (28%), Positives = 127/263 (48%), Gaps = 22/263 (8%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287 VW D+ T + D ++WPAD G D R F++ + + P Sbjct: 523 VWFDSAVASWATLKFPQTHDQFD-EWWPADFVTEGHDQTRGWFYSQLGASMVGFGRAPY- 580 Query: 288 KKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 K V HGF L G +K+SKSLGNV+ P+++I+ +G D LR +++ A +D Y+ + + Sbjct: 581 KSVLMHGFTLDAGGKKMSKSLGNVVSPLDIIDRLGADTLRAYVLSSSAPWEDLKYNLEEV 640 Query: 347 KKRVNADLANGIGNLVSRSVS-MILKDYDGMI----PTPGAFTESDESILSVCSRVLQEI 401 + V+ + N + N+ + M L ++D M A E D ILS V++ + Sbjct: 641 ET-VHRSI-NILWNVFRFPLPYMALDNFDPMQVSLDSVKDALREEDRWILSRAQSVIKAV 698 Query: 402 RENMQNQLIHRALAQVISLVSE-VDRYFDA---QKPWELKKTNPDR--ASTVLYVTVEVI 455 E M L+H+A+ +++ E + R++ + W + +PD+ A VLY EV Sbjct: 699 NEAMSGYLLHKAVREILEFALEDLSRWYIQLIRPRTW-TEADDPDKLAAYCVLY---EVY 754 Query: 456 RQLAILLQAFVPKLANKIFDILF 478 + L+ F+P LA +++ L Sbjct: 755 VTITKLISPFMPYLAEEMYQNLI 777 >gi|193794302|gb|ACF21363.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794460|gb|ACF21442.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + ++ DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAIEAGFTSVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166 >gi|312137335|ref|YP_004004672.1| isoleucyl-tRNA synthetase [Methanothermus fervidus DSM 2088] gi|311225054|gb|ADP77910.1| Isoleucyl-tRNA synthetase [Methanothermus fervidus DSM 2088] Length = 1036 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 75/267 (28%), Positives = 133/267 (49%), Gaps = 24/267 (8%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILR--FHAIY 274 +IPD ++ VWID+ + Y P K K +P D G D R F++ Sbjct: 509 RIPD----VLDVWIDSGVAGWASINY---PKEKKLFEKLFPYDFITEGHDQTRGWFYSQL 561 Query: 275 WPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 + +P KKV HGF L +G K+SKSLGNV++P EVI + G D LR++L+ Sbjct: 562 GCGVIAHEKIPY-KKVLMHGFTLDEQGRKMSKSLGNVVEPEEVIRKYGADVLRFYLLWAN 620 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTESDESILS 392 +D + + + K VN + N + N+ V + M L +++ + D+ ILS Sbjct: 621 KPWEDLRFVWEEV-KTVNK-MFNILWNVYVFATTYMSLDNFNPHKCKEFELKKEDKWILS 678 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVIS--LVSEVDRYFDA---QKPWELKKTNPDRASTV 447 + V +++ E M+N L+H+A +++I +V ++ R++ + W ++K +P + Sbjct: 679 KVNSVAKKVSEYMENLLLHKA-SRIIYDFIVEDLSRWYVKLIRSRTW-IEKDDPIKLGA- 735 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIF 474 Y V++QL ++ P + +I+ Sbjct: 736 YYALYNVLKQLITIMAPITPHITEEIY 762 Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 15 YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFV 73 Y + + H+G A+ II D RF + G +V G D HG I K + GV TK + Sbjct: 50 YCSGRIHLGTAWNKIIKDTYLRFKSMQGFNVNRKPGWDAHGLPIEHKVEKKLGVKTKKEI 109 Query: 74 DQ 75 ++ Sbjct: 110 EE 111 >gi|228917671|ref|ZP_04081212.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228841908|gb|EEM87014.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 245 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 64/115 (55%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 VT K ++ F L +YD + RT + HH+T + ++ ++ ++ IYK Sbjct: 63 VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQKVFLRLLEEEHIYK 117 >gi|225019373|ref|ZP_03708565.1| hypothetical protein CLOSTMETH_03326 [Clostridium methylpentosum DSM 5476] gi|224948004|gb|EEG29213.1| hypothetical protein CLOSTMETH_03326 [Clostridium methylpentosum DSM 5476] Length = 883 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 80/323 (24%), Positives = 143/323 (44%), Gaps = 47/323 (14%) Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DD----------PQYIMYV------ 230 ER +++ +KD +SR+ + WG +IP DD P+ + Sbjct: 396 ERFDKIFYHWMENIKDWCISRQLW-WGHRIPAYYCDDCGELIVSKTAPETCPHCGGHSFK 454 Query: 231 --------WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLL 280 W + +T G+ + + K F+P V G DI+ F + + A Sbjct: 455 QDEDTLDTWFSSALWPFSTLGWPNQTEDLKY-FYPTSTLVTGYDIIFFWVCRMIFSAVEH 513 Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 + P + VF HG + +G K+SKSLGN IDP+EVI E G DALR+ L G D Sbjct: 514 TGQAPF-EHVFIHGLVRDSEGRKMSKSLGNGIDPLEVIGEYGADALRFMLANGTNAGNDM 572 Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399 Y + +K N AN + N +R + M + D + P T D+ +L+ + +++ Sbjct: 573 RYSDEKVKAARN--FANKLWN-ATRFIMMNISDEVDTVELPSTLTIEDKWVLTQLNDLVK 629 Query: 400 EIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELK---KTNPDRASTVLYVTVEV 454 E+ +N++ + ++ + + D Y + K L+ +T+ + ++YV Sbjct: 630 EMTDNLEKFELSVTSQKIYDFIWNILCDWYIELTKT-RLQAGGETSLNAQKVLVYVMANT 688 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 ++ LL F+P + +I+ + Sbjct: 689 LK----LLHPFMPFITEEIWQAI 707 Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 6/70 (8%) Query: 5 EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58 EK + I PN Q H+GHA + + D+L R+ R+ G L+ GTD KI Sbjct: 45 EKKPYTIVIPPPNITGQLHMGHALDETLQDILIRWRRMQGYAALWVPGTDHASIATEAKI 104 Query: 59 AKAAQNAGVT 68 +A + G+T Sbjct: 105 VEAMKQEGLT 114 >gi|91772253|ref|YP_564945.1| isoleucyl-tRNA synthetase [Methanococcoides burtonii DSM 6242] gi|121684526|sp|Q12ZD1|SYI_METBU RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|91711268|gb|ABE51195.1| Isoleucyl-tRNA synthetase [Methanococcoides burtonii DSM 6242] Length = 1058 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 73/245 (29%), Positives = 120/245 (48%), Gaps = 22/245 (8%) Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNV 310 ++WPAD G D R F++ + + P K V HGF L G+K+SKS+GNV Sbjct: 546 EWWPADFITEGHDQTRGWFYSQLGASMVAFGKAPY-KNVLMHGFTLDGSGKKMSKSIGNV 604 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK--RVNADLANGIGNLVSRSVS- 367 I P EVI++ G D LR +++ A +D ++ D L R N N + N+ + Sbjct: 605 IQPAEVIDKFGADTLRSYVLSASAPWEDLKFNWDELATVHRTN----NILWNVYRFPLPY 660 Query: 368 MILKDYD----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 M L D+D D+ ILS V+ E+ + M +L+H+A+ + V E Sbjct: 661 MALDDFDPQKVSYESVEAYLRSEDKWILSRMQTVIAEVNKAMDARLLHKAMRSINEFVLE 720 Query: 424 -VDRYFDA---QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF-DILF 478 + R++ + W ++ NPD+ + V V +V A L+ F+P LA +++ +++ Sbjct: 721 DLSRWYIQLIRPRTW-VEADNPDKLA-VYRVLYDVFVTTAKLIAPFMPHLAEEMYQNLVR 778 Query: 479 VADEN 483 DEN Sbjct: 779 NIDEN 783 >gi|207344907|gb|EDZ71895.1| YGR264Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 352 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/293 (22%), Positives = 130/293 (44%), Gaps = 18/293 (6%) Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255 S++K GLK ++R WG +P + ++YVW DA Y++ T N ++ Sbjct: 17 SWLKDGLKPRCITRDLV-WGTPVPLEKYKDKVLYVWFDATIGYVSIT---SNYTKEWKQW 72 Query: 256 WPADLHV-----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG 308 W HV +GKD + FH + +P L N + + + ++ ++ K SKS G Sbjct: 73 WNNPEHVSLYQFMGKDNVPFHTVVFPGSQLGTEENWTMLHHLNTTEYLQYENGKFSKSRG 132 Query: 309 -NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 V + RY+L D + D R N++L +GN V+R + Sbjct: 133 VGVFGNNAQDSGISPSVWRYYLASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRLIK 192 Query: 368 MILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425 + Y+G++P P + D ++ + +L + M+ R L +SL + + Sbjct: 193 FVNAKYNGVVPKFDPKKVSNYD-GLVKDINEILSNYVKEMELGHERRGLEIAMSLSARGN 251 Query: 426 RYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++ K L +P+++ V+ V + +I ++ ++ ++P++ KI +L Sbjct: 252 QFLQENKLDNTLFSQSPEKSDAVVAVGLNIIYAVSSIITPYMPEIGEKINKML 304 >gi|193794480|gb|ACF21452.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794500|gb|ACF21462.1| methionyl-tRNA synthetase [Actinomyces oris] gi|193794508|gb|ACF21466.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + ++ DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P + D ++L + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPAELQDIDRALLDAIEAGFASVGGLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P+ R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPETQARLATVLHTLAQAVADL 166 >gi|307354269|ref|YP_003895320.1| isoleucyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571] gi|307157502|gb|ADN36882.1| isoleucyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571] Length = 1054 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 28/285 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 I VW D+ T GY + + K WPAD G+D R F++ + + Sbjct: 515 IFDVWFDSAMASWATIGYPREKERFE-KLWPADFITEGQDQTRGWFYSQLGASTIAFDRA 573 Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P KKV HGF L G K+SKSLGNV+ P E+IE VGVD LR +++ A D ++ Sbjct: 574 PY-KKVMMHGFSLDSDGRKMSKSLGNVVTPEEIIERVGVDVLRMYILSASAPWDDLKFNW 632 Query: 344 DGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAFTE------------SDESI 390 +G+K A N + N+ + MIL + G + D I Sbjct: 633 EGVKTTNRA--MNILWNVYRFPLPYMILDSFAPETGESGVWDADYIRKNIKEMPVEDRWI 690 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDA---QKPW-ELKKTNPDRAS 445 +S + + ++ +++N +H+A +I+ + E + R++ Q+ W E + +A Sbjct: 691 ISRINTLCSQVSVDIENCELHKASRNIINCILEDISRWYVQLIRQRMWLEEEAVEKIQAY 750 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490 +Y V+R+L ++ P ++ I+ L + R LD Sbjct: 751 ETMYY---VMRRLIEVIAPMAPYISESIYQNLRTNSDPRSVHMLD 792 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 27/50 (54%) Query: 15 YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 Y H+G A+ I+ D + RF R++GL+V+ G D HG I +N Sbjct: 48 YTTGHIHLGTAWNKILKDTILRFRRMNGLNVIDRAGYDMHGLPIEVRVEN 97 >gi|330507469|ref|YP_004383897.1| isoleucyl-tRNA synthetase [Methanosaeta concilii GP-6] gi|328928277|gb|AEB68079.1| isoleucyl-tRNA synthetase [Methanosaeta concilii GP-6] Length = 1053 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 71/268 (26%), Positives = 128/268 (47%), Gaps = 21/268 (7%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287 VW D+ T + + + ++WPAD G D R F++ + + P Sbjct: 522 VWFDSAVASWATLRFPSHEE-EFGEWWPADFITEGHDQTRGWFYSQLGASMVSFGRAPY- 579 Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 K V HGF L +G K+SKS+GN++ P EV+E G D LR++++ A +D + + + Sbjct: 580 KSVLMHGFTLDDQGRKMSKSIGNIVQPEEVVERFGADILRFYVLGANAPWEDLHFSWEAV 639 Query: 347 KKRVNADLANGIGNLVSRSVS-MILKDYD----GMIPTPGAFTESDESILSVCSRVLQEI 401 + + + N N ++ M+L D+D + + D ILS + + +EI Sbjct: 640 EN--TSRMINIFWNAYRFALPYMVLDDFDLKRADLDLYKSSLRPEDRWILSRVNSLAEEI 697 Query: 402 RENMQNQLIHRALAQVISLVSE-VDRYFDA---QKPWELKKTNPDRASTVLYVTV-EVIR 456 M+ +HR + + + E + R++ + W +++ +PD+ + Y T+ EV+ Sbjct: 698 TAEMEGYQLHRIVRSISDFILEDLSRWYIQLVRPRTW-IEQDDPDKLAA--YATIYEVLT 754 Query: 457 QLAILLQAFVPKLANKIFDILFVA-DEN 483 +LA L+ F P +A I+ L DEN Sbjct: 755 KLARLMAPFTPFIAESIYQNLVRGLDEN 782 >gi|330836357|ref|YP_004410998.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] gi|329748260|gb|AEC01616.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] Length = 884 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 86/353 (24%), Positives = 152/353 (43%), Gaps = 55/353 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F R+ DK L ++ P N S++++ ++D +SR+ + WG +IP Sbjct: 362 WFVRMRGMADKALKAWKDGEVTFYPRRWENTYSSWLEN-IRDWCISRQLW-WGHRIPVWY 419 Query: 222 -------------------------DDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKF 255 + ++ W + +T G+ D PD +F Sbjct: 420 CEDCGEMIVSRNDVTVCPKCGSSHLRQEEDVLDTWFSSWLWPFSTLGWPEDTPD--LKEF 477 Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFIL-HKGEKISKSLGN 309 +P + G DI+ F W A ++ A+L KV + G + +G K+SKSLGN Sbjct: 478 FPTQTLITGYDIIFF----WVARMIMASLEFTGKVPFKDVYMTGLVRDRQGRKMSKSLGN 533 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 IDP+EV++ G DA+++ L A G+D D D K + + AN I N SR + M Sbjct: 534 GIDPLEVVDLYGADAMKFTLAYMAAQGQDVLLDMDSFK--MGSRFANKIWN-ASRFLLMR 590 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427 L+ + + D+ I + + ++R ++ + A V D Y Sbjct: 591 LEGRTKVTVEEKDLSVMDKWIFAELNHAAGKVRAALEGYRFNEASQTVYDFFWNDFCDWY 650 Query: 428 FDAQKPWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +A K L+ +P DRA ++L ++++ + LL F+P + +I+ L Sbjct: 651 IEASKH-NLESNDPVVQDRAVSLL---LDILEESLRLLHPFLPFITQEIYSKL 699 Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 45/166 (27%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 H+GHA + D + R+ R+ G L+ GTD +AG+ T+ V++ Sbjct: 53 HMGHALNNSLPDTIIRYQRMAGRKTLWVPGTD-----------HAGIATQNVVERQLA-- 99 Query: 81 RDMADVLDISYDDFIRTT---EKRHHDT---------CRILWK----------------- 111 R+ D+ + F+ T +K+HH C W+ Sbjct: 100 REGLSRHDLGREKFLERTWQVKKKHHSVIVKQLEKIGCSCDWEHERFTMDEGLSRAVREA 159 Query: 112 --KISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 + ++G IYKG Y Y DDEV YK +G+ Y + Sbjct: 160 FVTLYERGLIYKGKYLINYCPHCGTALADDEVEYKTLEGRLYQVSY 205 >gi|229025922|ref|ZP_04182314.1| Valyl-tRNA synthetase [Bacillus cereus AH1272] gi|228735368|gb|EEL85971.1| Valyl-tRNA synthetase [Bacillus cereus AH1272] Length = 867 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 88/349 (25%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K + + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 350 WFVKMAPLAEKAVELQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407 Query: 222 -------------DDPQYI---------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 D P I + W + +T G+ D +++ D Sbjct: 408 WYHKETGEVYVGTDAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRYYSTD 467 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+RYFL A G+D + + ++ N N I N SR V M + D Sbjct: 524 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686 Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T ++ D Sbjct: 87 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 146 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194 >gi|117919450|ref|YP_868642.1| leucyl-tRNA synthetase [Shewanella sp. ANA-3] gi|166231644|sp|A0KTW7|SYL_SHESA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|117611782|gb|ABK47236.1| leucyl-tRNA synthetase [Shewanella sp. ANA-3] Length = 859 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 17/240 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+ARF RL G +VL G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 N + QN ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 92 NNKTAPAPWTYQNIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 S + DE +++V DG + PV+ E +F +++AY ++LL+ Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 + PE + ++R R+E + ++ S K+FD PD + YV I A Sbjct: 208 TLDGWPEQVKTMQRNWIGRSEGVEMTFG----VAGSDKSFDIYTTRPDTLMGVTYVAIAA 263 >gi|323147778|gb|ADX33168.1| MetG [Vibrio vulnificus] gi|323147782|gb|ADX33170.1| MetG [Vibrio vulnificus] gi|323147792|gb|ADX33175.1| MetG [Vibrio vulnificus] gi|323147796|gb|ADX33177.1| MetG [Vibrio vulnificus] gi|323147800|gb|ADX33179.1| MetG [Vibrio vulnificus] gi|323147804|gb|ADX33181.1| MetG [Vibrio vulnificus] gi|323147808|gb|ADX33183.1| MetG [Vibrio vulnificus] gi|323147812|gb|ADX33185.1| MetG [Vibrio vulnificus] gi|323147820|gb|ADX33189.1| MetG [Vibrio vulnificus] Length = 143 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 7/137 (5%) Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-- 259 L+ +SR +G +IP + YVW+DA Y+ + L + D ++W D Sbjct: 1 LQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKDSK 60 Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316 H IGKDI+ FH+++WPA L + P VF HG++ G K+SKS G + Sbjct: 61 TELYHFIGKDIVYFHSLFWPAMLDGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTY 120 Query: 317 IEEVGVDALRYFLVREI 333 ++ + + LRY+ ++ Sbjct: 121 LDHLDPECLRYYYAAKL 137 >gi|260584693|ref|ZP_05852439.1| valine--tRNA ligase [Granulicatella elegans ATCC 700633] gi|260157716|gb|EEW92786.1| valine--tRNA ligase [Granulicatella elegans ATCC 700633] Length = 881 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 20/200 (10%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P V G DIL F Sbjct: 431 GMEAPADAENWTQDVDVLDTWFSSALWPFSTMGWPDVEASDYKRYYPTSTLVTGYDILTF 490 Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ L K V HG I +G K+SKSLGN +DP+EVIE+ G DA Sbjct: 491 ----WVSRMMFQGLEFTGKRPFKNVLIHGLIRDSQGRKMSKSLGNGVDPMEVIEQYGADA 546 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAF 383 LR+FL A G+D Y D + N N I N SR M + D + G Sbjct: 547 LRWFLANGSAPGQDVRYSTDKMDAAWN--FINKIWN-ASRYALMNIGDLTVDQLDITGEK 603 Query: 384 TESDESILSVCSRVLQEIRE 403 T +D+ IL+ ++V+ ++ E Sbjct: 604 TLADKWILTRLNQVIAKVTE 623 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 80/167 (47%), Gaps = 23/167 (13%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA+++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDVTLQDMIIRQKRMQGYDTLWLPGMDHAGIATQAKVEEKLR 99 Query: 64 NAGVT-----TKVFVDQN-------SRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 G++ + F++Q + + R+ + IS D+ R T ++ D + Sbjct: 100 GEGLSRYDLGREKFLEQTWEWKEEYASHIREQWAKMGISV-DYRRERFTLDQGLSDAVKK 158 Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +KG IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 159 VFVTLYEKGLIYRGEYIINWDPKAKTSLSDIEVIHKDVEGAFYHMNY 205 >gi|253580599|ref|ZP_04857863.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847970|gb|EES75936.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 884 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 73/237 (30%), Positives = 115/237 (48%), Gaps = 13/237 (5%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVID 312 F+P D+ V G DI+ F I L +P V HG + +G K+SKSLGN ID Sbjct: 477 FYPTDVLVTGYDIIFFWVIRMVFSALEQTDQVPFHHVLIHGLVRDSQGRKMSKSLGNGID 536 Query: 313 PIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 P+EVI++ G DALR L+ A G D FY + K + + AN I N SR + M L+ Sbjct: 537 PLEVIDKYGADALRLTLMTGNAPGNDMRFYWE---KVEASRNFANKIWN-ASRFIMMNLE 592 Query: 372 DYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428 P D+ ILS + V++E ENM+ + A+ +V + + D Y Sbjct: 593 GKTVTEPENLNDLCAEDKWILSHLNTVIREATENMEKYELGIAVQKVYDFLWDELCDWYI 652 Query: 429 DAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 + K W+ ++ +P A+ L+ + + LL ++P + +I+ L +E+ Sbjct: 653 EMAKVRLWKAEE-DPKAANDALWTLRTALTEGLKLLHPYMPFITEEIYCTLLPEEES 708 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 15/83 (18%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73 PN Q H+GHA + + D+L RF R+ G + L+ GTD +A + T+V V Sbjct: 46 PNVTGQLHMGHALDETMQDILIRFKRMQGYEALWQPGTD-----------HAAIATEVKV 94 Query: 74 DQNSRNFRDMADVLDISYDDFIR 96 + ++ D DI ++F++ Sbjct: 95 IDKLK--KEGIDKHDIGREEFLK 115 >gi|113969341|ref|YP_733134.1| leucyl-tRNA synthetase [Shewanella sp. MR-4] gi|123029885|sp|Q0HLJ0|SYL_SHESM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|113884025|gb|ABI38077.1| leucyl-tRNA synthetase [Shewanella sp. MR-4] Length = 859 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 17/240 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+ARF RL G +VL G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 N + QN ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 92 NNKTAPAPWTYQNIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 S + DE +++V DG + PV+ E +F +++AY ++LL+ Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 + PE + ++R R+E + ++ S K+FD PD + YV I A Sbjct: 208 TLDGWPEQVKTMQRNWIGRSEGVEMTFG----VAGSDKSFDIYTTRPDTLMGVTYVAIAA 263 >gi|225175195|ref|ZP_03729191.1| valyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1] gi|225169371|gb|EEG78169.1| valyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1] Length = 881 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 91/367 (24%), Positives = 153/367 (41%), Gaps = 64/367 (17%) Query: 164 GYFFRLSAYQDKLLS---YYESHPEFILPIER-RNEVISFVKS-----------GLKDLS 208 G+ R S + LLS + P IER +N I FV ++D Sbjct: 345 GHCQRCSTVIEPLLSKQWFVRMKPLAKPAIERVKNGDIRFVPERFTKVYLNWVENIRDWC 404 Query: 209 LSRKTFDWGIKIP-------------DDPQY--------------IMYVWIDALTNYLTT 241 +SR+ + WG +IP ++PQ ++ W + +T Sbjct: 405 ISRQIW-WGHRIPAWYCDCGETIVSREEPQSCKQCGSSSLVQDDDVLDTWFSSALWPFST 463 Query: 242 TGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH- 298 G+ PD +K F+P D+ V G DI+ F W A ++ L +++ H +H Sbjct: 464 LGW---PDETKDLKHFYPTDVLVTGYDIIYF----WVARMIFMGLEFMEEIPFHTVYIHG 516 Query: 299 -----KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 +G K+SKSLGN +DP+++I+E G D LR+ L+ G D + ++ ++ N Sbjct: 517 LVRDAQGRKMSKSLGNGVDPLQIIDEYGADTLRFTLITGQGPGNDQRFRQESVENSRN-- 574 Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 AN I N SR V M L D+ + T++D IL ++ ++E+ M + Sbjct: 575 FANKIWN-ASRFVLMNLDDFTVDQVDLSSGLTDADRWILHRYNKTVREVNRLMDAYELGE 633 Query: 413 ALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 A + + D Y + K + + V V V+ + LL F+P + Sbjct: 634 AARTIYEFLWSDFCDWYIEMAKIPLYNAESEAEKNAVRSVLTYVLDRTLRLLHPFMPFIT 693 Query: 471 NKIFDIL 477 +I+ L Sbjct: 694 EEIWQKL 700 >gi|189425595|ref|YP_001952772.1| valyl-tRNA synthetase [Geobacter lovleyi SZ] gi|189421854|gb|ACD96252.1| valyl-tRNA synthetase [Geobacter lovleyi SZ] Length = 897 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 91/359 (25%), Positives = 152/359 (42%), Gaps = 51/359 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 ++ ++ ++ L + ILP + N ++++ ++D +SR+ + WG +IP Sbjct: 363 WYVKVGPLAERALQAVKDGRTRILPKQWENTYYDWMEN-IRDWCISRQIW-WGHRIPAWF 420 Query: 222 -----------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256 +DP ++ W + +T G+ D K +F+ Sbjct: 421 CDHCGKITVSMEDPTSCSQCGSDELRQETDVLDTWFSSALWPFSTMGWPDQTAELK-RFY 479 Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL----PLP-KKVFSHGFILHK-GEKISKSLGNV 310 P V G DIL +W A ++ L +P K V+ H + G+K+SKS GNV Sbjct: 480 PTATLVTGFDIL----FFWVARMMMMGLHFMDEVPFKDVYIHALVRDAHGQKMSKSKGNV 535 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 IDP+ VI++ G DA R+ L A G+D ++ + N N + N +R M L Sbjct: 536 IDPLTVIDQYGTDAFRFTLAAFAAQGRDIKLAEERISGYRN--FCNKVWN-AARFTMMNL 592 Query: 371 KDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE-VDR 426 + + D ++ TESDE IL + + + + + A + SE D Sbjct: 593 EGFEPDQLVFEDLRLTESDEWILHRLNETARATNQALDEYRFNEAAMTLYQFTWSEFCDW 652 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 Y + K EL +P R T YV V+ L LL +P + +I+ L D RC Sbjct: 653 YLELSKQ-ELYGDDPLRRRTTQYVLWSVLEHLLRLLHPIMPFITEEIWQTLPKGD--RC 708 >gi|289422687|ref|ZP_06424527.1| valine--tRNA ligase [Peptostreptococcus anaerobius 653-L] gi|289156866|gb|EFD05491.1| valine--tRNA ligase [Peptostreptococcus anaerobius 653-L] Length = 883 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 72/237 (30%), Positives = 111/237 (46%), Gaps = 23/237 (9%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-----HKGEKISKSLGN 309 ++P + V G DI+ F + S+ + K F H I +G K+SKSLGN Sbjct: 476 YFPTSVLVTGYDIIFFWVV---RMAFSSMFCMNDKPFEHVLIHGLVRDSEGRKMSKSLGN 532 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKD-GFY-DKDGLKKRVNADLANGIGNLVSRSVS 367 IDP+E+I++ G DALR+ L+ + G D FY ++ + N L N SR V Sbjct: 533 GIDPLEIIDQFGADALRFTLITGNSPGNDMRFYMERVEFARNFNNKLWNA-----SRFVF 587 Query: 368 MILKD---YDGMI--PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV- 421 M L+D DG+ T +D+ I+S +R++ E+ NM + AL + Sbjct: 588 MNLEDESLLDGLTREAVEKDLTLADKWIISRANRIVDEVNTNMDKFELGIALQKSYEFTW 647 Query: 422 SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 SE D Y + KP L + D LY V+ ++ LL F+P + +I+ L Sbjct: 648 SEYCDWYIEIVKP-RLYGDDRDAKRAALYTLTYVLEKILKLLHPFIPFITEEIYSYL 703 >gi|116329125|ref|YP_798845.1| valyl-tRNA synthetase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116121869|gb|ABJ79912.1| Valine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 882 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 76/277 (27%), Positives = 125/277 (45%), Gaps = 33/277 (11%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 ++ DP ++ W + +T G+ + K K++P + V G DI+ F W + Sbjct: 442 EVEPDPD-VLDTWFSSQLWPFSTMGWPEQTPDLK-KYYPTSVLVTGFDIIFF----WVSR 495 Query: 279 LLSANLPLPK-----KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++ + K KV HG + K G+K SKS+GNVIDP+ ++E+ G D+ R+FL Sbjct: 496 MIMMGMKFLKAPPFHKVLIHGLVRDKDGKKFSKSVGNVIDPLVMMEKYGTDSFRFFLAAT 555 Query: 333 IACGKDGFYDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE---- 385 + GKD +D+ DG + N I N SR + M LK + +PT G +E Sbjct: 556 LPEGKDILFDESRLDGYR-----SFCNKIWN-SSRFILMNLK--ESFVPT-GITSEIEKD 606 Query: 386 ---SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTN 440 D+ ILS +R L+E + + A + + D Y + KP K + Sbjct: 607 LEPMDQWILSRFNRCLEEYNKAHSKFHFYEMAAAIYEFIWGDFCDWYIELVKPRAYGKVS 666 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P V +V+ + LL F+P L ++ + Sbjct: 667 PRSTEVAKQVLSDVLIRALGLLHPFMPFLTEEVHSVF 703 >gi|114046568|ref|YP_737118.1| leucyl-tRNA synthetase [Shewanella sp. MR-7] gi|123131668|sp|Q0HXU4|SYL_SHESR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|113888010|gb|ABI42061.1| leucyl-tRNA synthetase [Shewanella sp. MR-7] Length = 859 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 17/240 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+ARF RL G +VL G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 N + QN ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 92 NNKTAPAPWTYQNIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 S + DE +++V DG + PV+ E +F +++AY ++LL+ Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 + PE + ++R R+E + ++ S K+FD PD + YV I A Sbjct: 208 TLDGWPEQVKTMQRNWIGRSEGVEMTFG----VAGSDKSFDIYTTRPDTLMGVTYVAIAA 263 >gi|257869995|ref|ZP_05649648.1| valyl-tRNA synthetase [Enterococcus gallinarum EG2] gi|257804159|gb|EEV32981.1| valyl-tRNA synthetase [Enterococcus gallinarum EG2] Length = 879 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 29/279 (10%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P + V G DI+ F Sbjct: 429 GLEAPADAENWTQDPDVLDTWFSSALWPFSTMGWPDENSADYQRYFPTNTLVTGYDIIAF 488 Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ +L K V HG I +G K+SKSLGN IDP+EVIE+ G DA Sbjct: 489 ----WVSRMIFQSLEFTGKRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMEVIEKYGADA 544 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----P 380 LR+FL A G+D + + + D A N + + +L + +GM T Sbjct: 545 LRWFLSNGSAPGQDVRFSYEKM------DAAWNFINKIWNASRFVLMNVEGMTVTDIDFS 598 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438 G + +D IL+ + ++++ E A Q+ + + + D Y + K L Sbjct: 599 GEKSVADRWILTRLNETIEKVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-TLYG 657 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 N + V V+ Q+ LL +P + +I+ L Sbjct: 658 ENEAAKQVNKSILVHVLDQILRLLHPIMPFVTEEIWSKL 696 Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 25/165 (15%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLR 99 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + + LD S + F T ++ D R Sbjct: 100 EQGISRYDLGREKFVDQVWEWKEEYAGHIREQWAKLGLSLDYSRERF--TLDEGLSDAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYN 151 ++ + +K IY+G Y W A + + ++K +G +Y+ Sbjct: 158 KVFVTLYEKDLIYRGEYIINWDPQARTALSDIEVIHKEIEGAFYH 202 >gi|291461006|ref|ZP_06026392.2| leucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693] gi|291379583|gb|EFE87101.1| leucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693] Length = 862 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + + YP+ + H+GHA I DV++R+ R+ G +VL G D G AA Sbjct: 35 KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 94 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+ ++ N N R ++ SYD I + ++ + L+K++ +KG IYK Sbjct: 95 QNGIHPAIWTKSNIENMRRQLKLIGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 154 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + +++V DG + V E E +FF+++ Y D+LL +E Sbjct: 155 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 211 Query: 182 ----SHPEFILPIER 192 PE +L +++ Sbjct: 212 EIKDGWPEKVLTMQK 226 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 36/180 (20%), Positives = 87/180 (48%), Gaps = 15/180 (8%) Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K EK+SKS N +DP E++++ G D R F++ K+ ++++GL + Sbjct: 611 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 668 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417 L+ + ++ +D + ++ D+++L ++ ++++ + ++N + A+A Sbjct: 669 WRLIFENSELVKNAHDDI--DYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAAN 726 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + L++EV Y TN + + ++++ ++L FVP ++I++ L Sbjct: 727 MELINEVQSYV----------TNSMSSEQAPKILAYTLKKILLMLSPFVPHFCDEIWEEL 776 >gi|237739547|ref|ZP_04570028.1| leucyl-tRNA synthetase [Fusobacterium sp. 2_1_31] gi|229423155|gb|EEO38202.1| leucyl-tRNA synthetase [Fusobacterium sp. 2_1_31] Length = 859 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + + YP+ + H+GHA I DV++R+ R+ G +VL G D G AA Sbjct: 32 KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+ ++ N N R ++ SYD I + ++ + L+K++ +KG IYK Sbjct: 92 QNGIHPAIWTKSNIENMRRQLKLIGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + +++V DG + V E E +FF+++ Y D+LL +E Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208 Query: 182 ----SHPEFILPIER 192 PE +L +++ Sbjct: 209 EIKDGWPEKVLTMQK 223 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 36/180 (20%), Positives = 87/180 (48%), Gaps = 15/180 (8%) Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K EK+SKS N +DP E++++ G D R F++ K+ ++++GL + Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417 L+ + ++ +D + ++ D+++L ++ ++++ + ++N + A+A Sbjct: 666 WRLIFENSELVKNAHDDI--DYDKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAAN 723 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + L++EV Y TN + + ++++ ++L FVP ++I++ L Sbjct: 724 MELINEVQSYV----------TNSMSSEQAPKILAYTLKKILLMLSPFVPHFCDEIWEEL 773 >gi|116330266|ref|YP_799984.1| valyl-tRNA synthetase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116123955|gb|ABJ75226.1| Valine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 882 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 76/277 (27%), Positives = 125/277 (45%), Gaps = 33/277 (11%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 ++ DP ++ W + +T G+ + K K++P + V G DI+ F W + Sbjct: 442 EVEPDPD-VLDTWFSSQLWPFSTMGWPEQTPDLK-KYYPTSVLVTGFDIIFF----WVSR 495 Query: 279 LLSANLPLPK-----KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++ + K KV HG + K G+K SKS+GNVIDP+ ++E+ G D+ R+FL Sbjct: 496 MIMMGMKFLKAPPFHKVLIHGLVRDKDGKKFSKSVGNVIDPLVMMEKYGTDSFRFFLAAT 555 Query: 333 IACGKDGFYDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE---- 385 + GKD +D+ DG + N I N SR + M LK + +PT G +E Sbjct: 556 LPEGKDILFDESRLDGYR-----SFCNKIWN-SSRFILMNLK--ESFVPT-GITSEIEKD 606 Query: 386 ---SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTN 440 D+ ILS +R L+E + + A + + D Y + KP K + Sbjct: 607 LEPMDQWILSRFNRCLEEYNKAHSKFHFYEMAAAIYEFIWGDFCDWYIELVKPRAYGKVS 666 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P V +V+ + LL F+P L ++ + Sbjct: 667 PRSTEVAKQVLSDVLIRALGLLHPFMPFLTEEVHSVF 703 >gi|51891504|ref|YP_074195.1| valyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] gi|81826240|sp|Q67SJ2|SYV_SYMTH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|51855193|dbj|BAD39351.1| valyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] Length = 911 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 93/354 (26%), Positives = 150/354 (42%), Gaps = 56/354 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 ++ ++ + + ES I+P ER +V ++D +SR+ + WG +IP Sbjct: 369 WYVKMKPLAEPAIRAVESGQIKIVP-ERFTKVYLHWMENIQDWCISRQIW-WGHRIPVWY 426 Query: 222 -DDPQYI------------------------MYVWIDALTNYLTTTGYLDNPDGSKAKFW 256 DD ++ + W + +T G+ D+ + F+ Sbjct: 427 CDDCGHLTVSETDPTRCEKCGSANIRQDEDALDTWFSSALWPFSTLGWPDDTADLR-YFF 485 Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNV 310 P D+ V G DIL F W A ++ ++L L K+ H +LH +G K+SKSLGN Sbjct: 486 PTDVLVTGYDILFF----WVARMIFSSLELTGKIPFHTVVLHGLVRDAQGRKMSKSLGNG 541 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 +DPI+VI++ G DALR+ LV + G D + + ++ N AN + N SR V M L Sbjct: 542 VDPIDVIDQYGTDALRFMLVTGSSPGNDIRFHTERVENARN--FANKLWN-ASRFVLMNL 598 Query: 371 KDYDGMIPTPGAFTESD------ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423 D+ GA + D + +R + E+ Q R + I SE Sbjct: 599 ADWQPA--AEGAALQYDVADRWIRHRFNEAARAVNELLGEYQYGEAARTIYDFI--WSEF 654 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D Y + KP +P RA+ V+ LL F+P + I+ L Sbjct: 655 CDWYIELVKPRLYNPADPTRAA-AQETLARVLEGTLRLLHPFMPYITEAIWQKL 707 >gi|294783391|ref|ZP_06748715.1| leucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA] gi|294480269|gb|EFG28046.1| leucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA] Length = 859 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + + YP+ + H+GHA I DV++R+ R+ G +VL G D G AA Sbjct: 32 KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+ ++ N N R ++ SYD I + ++ + L+K++ +KG IYK Sbjct: 92 QNGIHPAIWTKSNIENMRRQLKLIGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + +++V DG + V E E +FF+++ Y D+LL +E Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208 Query: 182 ----SHPEFILPIER 192 PE +L +++ Sbjct: 209 EIKDGWPEKVLTMQK 223 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 36/180 (20%), Positives = 87/180 (48%), Gaps = 15/180 (8%) Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K EK+SKS N +DP E++++ G D R F++ K+ ++++GL + Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417 L+ + ++ +D + ++ D+++L ++ ++++ + ++N + A+A Sbjct: 666 WRLIFENAELVKNAHDEI--DYDKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAAN 723 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + L++EV Y TN + + ++++ ++L FVP ++I++ L Sbjct: 724 MELINEVQSYV----------TNSMSSEQAPKILAYTLKKILLMLSPFVPHFCDEIWEEL 773 >gi|18310901|ref|NP_562835.1| valyl-tRNA synthetase [Clostridium perfringens str. 13] gi|81766834|sp|Q8XJ42|SYV_CLOPE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|18145583|dbj|BAB81625.1| valine-tRNA ligase [Clostridium perfringens str. 13] Length = 880 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 81/270 (30%), Positives = 130/270 (48%), Gaps = 26/270 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D D + F+P V G DI+ F W A ++ + + Sbjct: 450 VLDTWFSSALWPFSTLGWPDRTDDLEF-FYPTSTLVTGYDIIFF----WVARMIFSGIHN 504 Query: 285 ----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 P V HG I +G K+SKSLGN +DP+EVI+E G DALR+ LV A G D Sbjct: 505 MGETPF-DTVLIHGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDI 563 Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSR 396 Y + +RV A + AN I N SR V M L ++ ++ +D+ ILS + Sbjct: 564 RY----IPERVEAARNFANKIWN-ASRFVMMNLDRELMDKYKDCQEYSLADQWILSRTNS 618 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY-VTVE 453 +++E+ ENM+ + AL +V + D Y + KP + + ++A V++ V Sbjct: 619 LIKEVTENMEKYELGIALQKVHDFLWTEFCDYYIELVKP--VLYGDDEKAKGVVFNVLYT 676 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483 V+ LL +P + +I+ L E+ Sbjct: 677 VLNTGLKLLHPVMPFITEEIYTHLSTETES 706 >gi|331082707|ref|ZP_08331830.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA] gi|330400326|gb|EGG79968.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA] Length = 881 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 71/240 (29%), Positives = 113/240 (47%), Gaps = 21/240 (8%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308 F+P D+ V G DI+ F W ++ + L K H ++H +G K+SKSLG Sbjct: 477 FYPTDVLVTGYDIIFF----WVIRMVFSGLEQTGKTPFHHVLIHGLVRDSQGRKMSKSLG 532 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 N IDP+EVI++ G DALR L+ A G D + + ++ N AN + N SR + M Sbjct: 533 NGIDPLEVIDKYGADALRLTLMTGNAPGNDMRFYWERIEASRN--FANKVWN-ASRFIMM 589 Query: 369 ILKDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423 L+ D IP T +D+ ILS + + +E EN+ + A+ +V + E Sbjct: 590 NLEKAD--IPKNIDLQTLTGADKWILSKVNTLAKEATENLDKYELGIAVQKVYDFIWEEF 647 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 D Y + KP L + L+ V+ LL ++P + +I+ L +E+ Sbjct: 648 CDWYIEMVKP-RLYNDEDTTKAAALWTLKTVLSNALKLLHPYMPFITEEIYCTLCPEEES 706 Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Query: 4 REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 R+K + + PN Q H+GHA + + D+L RF R+ G + L+ GTD Sbjct: 34 RDKKPFTIVMPPPNVTGQLHMGHALDETMQDILIRFKRMQGYEALWQPGTD 84 >gi|309804780|ref|ZP_07698844.1| valine--tRNA ligase [Lactobacillus iners LactinV 09V1-c] gi|308165890|gb|EFO68109.1| valine--tRNA ligase [Lactobacillus iners LactinV 09V1-c] Length = 879 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 39/268 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+LS + + ER + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQLW-WGHRIPAWY 418 Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 D ++ W + +T G+ D +++P + Sbjct: 419 NKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFKRYFPTNAL 478 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315 V G DI+ F W + ++ +L K+ V HG I +G K+SKSLGN IDP++ Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGIDPMD 534 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373 V+E+ G D+LR+FL+ A G+D + + N N I N SR V M L + Sbjct: 535 VVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPEDAT 591 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F SD+ I +RV++++ Sbjct: 592 AAHMPDVDTFDLSDKWIFDKLNRVVKKV 619 Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 25/165 (15%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA 59 S I PN + H+GHA++ I D L RF R+ G D L+ G D G +K+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEEKLR 98 Query: 60 KAAQNAGVTTKVFVDQNSRNFRD------------MADVLDISYDDFIRTTEKRHHDTCR 107 K Q+ + + +++D M LD S + F T + R Sbjct: 99 KQGQDRHQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERF--TLDDGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYN 151 ++ K+ ++G IY+G Y + + E +D EV +K +G +Y+ Sbjct: 157 KVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYH 201 >gi|237736668|ref|ZP_04567149.1| valyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] gi|229420530|gb|EEO35577.1| valyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] Length = 886 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 16/267 (5%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ P+ +K F+P V G DI+ F F L Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELETFYPTSTLVTGADIIFFWVARMIMFGLYEMK 508 Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 +P K VF HG + + G K+SKSLGN DP+ +IEE G DA+R+ ++ + G+D ++ Sbjct: 509 EIPFKNVFFHGIVRDELGRKMSKSLGNSPDPLNLIEEYGADAIRFSMLYNTSQGQDVYFS 568 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400 + L+ + + AN I N V+R V M L+ +D + F DE I S + +E Sbjct: 569 EKLLE--MGRNFANKIWN-VARFVIMNLEGFDVKSVNKDELKFELVDEWIFSRLNETTKE 625 Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIR 456 + + + L+ A V + D Y + K + +++ + +T YV V+ Sbjct: 626 VHDCLDKFLLDDAAKAVYEFLRGDFCDWYVELAKVRLYNNEESGKESKTTAQYVLWTVLE 685 Query: 457 QLAILLQAFVPKLANKIFDILFVADEN 483 LL F+P + +I+ + V E Sbjct: 686 AGLKLLHPFMPFITEEIWQKIKVEGET 712 >gi|323147830|gb|ADX33194.1| MetG [Vibrio vulnificus] Length = 143 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 7/137 (5%) Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-- 259 L+ +SR +G +IP + YVW+DA Y+ + L + D ++W D Sbjct: 1 LQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKDSK 60 Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316 H IGKDI+ FH+++WPA L + P VF HG++ G K+SKS G + Sbjct: 61 TELYHFIGKDIVYFHSLFWPAMLDGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTY 120 Query: 317 IEEVGVDALRYFLVREI 333 + + + LRY+ ++ Sbjct: 121 FDHLDPECLRYYYAAKL 137 >gi|228910293|ref|ZP_04074110.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 200] gi|228849353|gb|EEM94190.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 200] Length = 867 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 85/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ D +++ D Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRYYSTD 467 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+RYFL A G+D + + ++ N N I N SR V M + D Sbjct: 524 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686 Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T ++ D Sbjct: 87 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 146 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194 >gi|228902987|ref|ZP_04067127.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] gi|228967560|ref|ZP_04128586.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|228792139|gb|EEM39715.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|228856663|gb|EEN01183.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] Length = 867 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 85/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ D +++ D Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRYYSTD 467 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+RYFL A G+D + + ++ N N I N SR V M + D Sbjct: 524 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 87 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 146 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194 >gi|312143436|ref|YP_003994882.1| valyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] gi|311904087|gb|ADQ14528.1| valyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] Length = 884 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 71/263 (26%), Positives = 125/263 (47%), Gaps = 22/263 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ P+ S+ F+P D+ V G+DI+ F W A ++ L Sbjct: 451 VLDTWFSSALWPFSTLGW---PEQSEDLISFYPTDVLVTGRDIIFF----WVARMIFMGL 503 Query: 285 PLPKK-----VFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 + ++ HG I +G K+SKSLGN IDP+EV+++ G DALR+ L+ G D Sbjct: 504 KFQDEKPFSDIYIHGLIRDAQGRKMSKSLGNGIDPLEVVDKYGADALRFTLITGNTPGND 563 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSR 396 + ++ L+ N AN I N SR V M L+D+D + + T +D+ + S + Sbjct: 564 MRFREERLEASRN--FANKIWN-ASRFVLMNLEDFDLEALDKSDLKETLADKWMQSRLNT 620 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 V+ EI + +++ + + + D Y + K ++ +P T Y + Sbjct: 621 VIAEIDDALEDYNFGEMASSLYDFIWNEFCDWYIELLKARLYQEEDPAAKLTAQYYALNT 680 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 + L LL +P + +I+ L Sbjct: 681 LESLLRLLHPVMPFITEEIWQKL 703 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 30/200 (15%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQ---- 56 E EK S + PN Q H+GHA + + D+L R+ R+ G L+ GTD H Sbjct: 34 ETEKGTFSIVMPPPNITGQLHMGHALDNTLQDILTRWKRMQGYRSLWLPGTD-HASIATE 92 Query: 57 -KIAKAAQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99 K+ ++ G+ + + ++ + + M D S + F T + Sbjct: 93 VKVVDKLKDQGIEKDEIGREGFLEKAWEWKEEYGNRITNQLKKMGSSCDWSRERF--TLD 150 Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQ 158 + + ++ ++ ++G IY+G Y + +D EV +K +G++Y H Sbjct: 151 EGCSEAVEEVFIQLYNEGLIYQGDYIVNWCPSCHTTLSDIEVEHKETEGKFY---HMKYP 207 Query: 159 WMEEEGYFFRLSAYQDKLLS 178 + +EGY + + +L Sbjct: 208 YKNKEGYITVATTRPETMLG 227 >gi|259501662|ref|ZP_05744564.1| valine-tRNA ligase [Lactobacillus iners DSM 13335] gi|302191130|ref|ZP_07267384.1| valyl-tRNA synthetase [Lactobacillus iners AB-1] gi|309806332|ref|ZP_07700345.1| valine--tRNA ligase [Lactobacillus iners LactinV 03V1-b] gi|309807726|ref|ZP_07701660.1| valine--tRNA ligase [Lactobacillus iners LactinV 01V1-a] gi|309809959|ref|ZP_07703807.1| valine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] gi|312871976|ref|ZP_07732058.1| valine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|312874665|ref|ZP_07734689.1| valine--tRNA ligase [Lactobacillus iners LEAF 2053A-b] gi|329921098|ref|ZP_08277621.1| valine--tRNA ligase [Lactobacillus iners SPIN 1401G] gi|259166947|gb|EEW51442.1| valine-tRNA ligase [Lactobacillus iners DSM 13335] gi|308167316|gb|EFO69482.1| valine--tRNA ligase [Lactobacillus iners LactinV 03V1-b] gi|308168986|gb|EFO71070.1| valine--tRNA ligase [Lactobacillus iners LactinV 01V1-a] gi|308169747|gb|EFO71792.1| valine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] gi|311089895|gb|EFQ48315.1| valine--tRNA ligase [Lactobacillus iners LEAF 2053A-b] gi|311092553|gb|EFQ50915.1| valine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|328935005|gb|EGG31494.1| valine--tRNA ligase [Lactobacillus iners SPIN 1401G] Length = 879 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 39/268 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+LS + + ER + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQLW-WGHRIPAWY 418 Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 D ++ W + +T G+ D +++P + Sbjct: 419 NKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFKRYFPTNAL 478 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315 V G DI+ F W + ++ +L K+ V HG I +G K+SKSLGN IDP++ Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGIDPMD 534 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373 V+E+ G D+LR+FL+ A G+D + + N N I N SR V M L + Sbjct: 535 VVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPEDAA 591 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F SD+ I +RV++++ Sbjct: 592 AAHMPDVDTFDLSDKWIFDKLNRVVKKV 619 Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 25/165 (15%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA 59 S I PN + H+GHA++ I D L RF R+ G D L+ G D G +K+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEEKLR 98 Query: 60 KAAQNAGVTTKVFVDQNSRNFRD------------MADVLDISYDDFIRTTEKRHHDTCR 107 K Q+ + + +++D M LD S + F T + R Sbjct: 99 KQGQDRHQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERF--TLDDGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYN 151 ++ K+ ++G IY+G Y + + E +D EV +K +G +Y+ Sbjct: 157 KVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYH 201 >gi|193794516|gb|ACF21470.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + ++ DALRYF+ D + +R N +L Sbjct: 1 FLHMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P + D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAIEAGFTSVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166 >gi|315653725|ref|ZP_07906645.1| valine--tRNA ligase [Lactobacillus iners ATCC 55195] gi|325913051|ref|ZP_08175424.1| valine--tRNA ligase [Lactobacillus iners UPII 60-B] gi|315489087|gb|EFU78729.1| valine--tRNA ligase [Lactobacillus iners ATCC 55195] gi|325477731|gb|EGC80870.1| valine--tRNA ligase [Lactobacillus iners UPII 60-B] Length = 879 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 39/268 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+LS + + ER + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQLW-WGHRIPAWY 418 Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 D ++ W + +T G+ D +++P + Sbjct: 419 NKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFKRYFPTNAL 478 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315 V G DI+ F W + ++ +L K+ V HG I +G K+SKSLGN IDP++ Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGIDPMD 534 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373 V+E+ G D+LR+FL+ A G+D + + N N I N SR V M L + Sbjct: 535 VVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPEDAA 591 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F SD+ I +RV++++ Sbjct: 592 AAHMPDVDTFDLSDKWIFDKLNRVVKKV 619 Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 25/165 (15%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA 59 S I PN + H+GHA++ I D L RF R+ G D L+ G D G +K+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEEKLR 98 Query: 60 KAAQNAGVTTKVFVDQNSRNFRD------------MADVLDISYDDFIRTTEKRHHDTCR 107 K Q+ + + +++D M LD S + F T + R Sbjct: 99 KQGQDRHQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERF--TLDDGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYN 151 ++ K+ ++G IY+G Y + + E +D EV +K +G +Y+ Sbjct: 157 KVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYH 201 >gi|309803196|ref|ZP_07697293.1| valine--tRNA ligase [Lactobacillus iners LactinV 11V1-d] gi|308164704|gb|EFO66954.1| valine--tRNA ligase [Lactobacillus iners LactinV 11V1-d] Length = 879 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 39/268 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+LS + + ER + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQLW-WGHRIPAWY 418 Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 D ++ W + +T G+ D +++P + Sbjct: 419 NKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFKRYFPTNAL 478 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315 V G DI+ F W + ++ +L K+ V HG I +G K+SKSLGN IDP++ Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGIDPMD 534 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373 V+E+ G D+LR+FL+ A G+D + + N N I N SR V M L + Sbjct: 535 VVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPEDAA 591 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F SD+ I +RV++++ Sbjct: 592 AAHMPDVDTFDLSDKWIFDKLNRVVKKV 619 Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 25/165 (15%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA 59 S I PN + H+GHA++ I D L RF R+ G D L+ G D G +K+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEEKLR 98 Query: 60 KAAQNAGVTTKVFVDQNSRNFRD------------MADVLDISYDDFIRTTEKRHHDTCR 107 K Q+ + + +++D M LD S + F T + R Sbjct: 99 KQGQDRHQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERF--TLDDGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYN 151 ++ K+ ++G IY+G Y + + E +D EV +K +G +Y+ Sbjct: 157 KVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYH 201 >gi|315186220|gb|EFU19981.1| valyl-tRNA synthetase [Spirochaeta thermophila DSM 6578] Length = 882 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 88/360 (24%), Positives = 151/360 (41%), Gaps = 47/360 (13%) Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 H PV+ E +F R+ K L +E P + N ++++ ++D +SR+ Sbjct: 353 HVPVEPYLSEQWFVRMDTMAQKALKAWEEGKIQFFPRKWENTYTHWLRN-IRDWCISRQL 411 Query: 214 FDWGIKIP--------------DDP--------------QYIMYVWIDALTNYLTTTGYL 245 + WG +IP +DP + ++ W + +T G+ Sbjct: 412 W-WGHRIPVWYCDDCGAQMVLREDPTACTSCGSTNIRQDEDVLDTWFSSWLWPFSTLGWP 470 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFILHK- 299 + + K +F+P V DI+ F W A ++ A+L +V + G + K Sbjct: 471 EETEDLK-RFFPTTTLVTAYDIIFF----WVARMIMASLEFMHEVPFRDIYITGLVRDKQ 525 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKSLGN IDP+E++ G DALR+ L A G+D DKD + V A AN I Sbjct: 526 GRKMSKSLGNGIDPLEIVNVYGADALRFTLAFLAAQGQDVLLDKDTFQ--VGAHFANKIW 583 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 N SR + M L+ + T+ D IL +R + + ++ + A Sbjct: 584 N-ASRFILMNLEGRRLIPFEKIEKTDIDRWILHRLNRAAAAVSDALETYRFNEAAQTAYE 642 Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D Y ++ K L + ++ + + V+ Q LL F+P + +++ L Sbjct: 643 FFWSDFCDWYIESAK-LSLNGDDEQEKDRIVSLLLFVLEQALKLLHPFLPFVTEELYQKL 701 >gi|168204897|ref|ZP_02630902.1| valyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|170663625|gb|EDT16308.1| valyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] Length = 880 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 81/270 (30%), Positives = 130/270 (48%), Gaps = 26/270 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D D + F+P V G DI+ F W A ++ + + Sbjct: 450 VLDTWFSSALWPFSTLGWPDRTDDLEF-FYPTSTLVTGYDIIFF----WVARMIFSGIHN 504 Query: 285 ----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 P V HG I +G K+SKSLGN +DP+EVI+E G DALR+ LV A G D Sbjct: 505 MGETPF-DTVLIHGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDI 563 Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSR 396 Y + +RV A + AN I N SR V M L ++ ++ +D+ ILS + Sbjct: 564 RY----IPERVEAARNFANKIWN-ASRFVMMNLDRELMDKYKDCKEYSLADQWILSRMNS 618 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY-VTVE 453 +++E+ ENM+ + AL +V + D Y + KP + + ++A V++ V Sbjct: 619 LIKEVTENMEKYELGIALQKVHDFLWTEFCDYYIELVKP--VLYGDDEKAKGVVFNVLYT 676 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483 V+ LL +P + +I+ L E+ Sbjct: 677 VLNTGLKLLHPVMPFITEEIYTHLSTETES 706 >gi|325911674|ref|ZP_08174081.1| valine--tRNA ligase [Lactobacillus iners UPII 143-D] gi|325476440|gb|EGC79599.1| valine--tRNA ligase [Lactobacillus iners UPII 143-D] Length = 879 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 39/268 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+LS + + ER + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQLW-WGHRIPAWY 418 Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 D ++ W + +T G+ D +++P + Sbjct: 419 NKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFKRYFPTNAL 478 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315 V G DI+ F W + ++ +L K+ V HG I +G K+SKSLGN IDP++ Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGIDPMD 534 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373 V+E+ G D+LR+FL+ A G+D + + N N I N SR V M L + Sbjct: 535 VVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPEDAA 591 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F SD+ I +RV++++ Sbjct: 592 AAHMPDVDTFDLSDKWIFDKLNRVVKKV 619 Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 25/165 (15%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA 59 S I PN + H+GHA++ I D L RF R+ G D L+ G D G +K+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEEKLR 98 Query: 60 KAAQNA-GVTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 K Q+ + + F+ Q + M LD S + F T + R Sbjct: 99 KQGQDRYQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERF--TLDDGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYN 151 ++ K+ ++G IY+G Y + + E +D EV +K +G +Y+ Sbjct: 157 KVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYH 201 >gi|320334772|ref|YP_004171483.1| Valyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] gi|319756061|gb|ADV67818.1| Valyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] Length = 884 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 88/359 (24%), Positives = 154/359 (42%), Gaps = 52/359 (14%) Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 PV+ + +F R+ D +L+ + ++P +R +V ++D ++SR+ + Sbjct: 370 PVEPIISTQWFVRMKPMADAVLAGLDRGDMQLVP-DRYTKVNRDWLENIRDWNISRQLW- 427 Query: 216 WGIKIP----------------------DDPQY----------IMYVWIDALTNYLTTTG 243 WG +IP DP+Y + W + +T G Sbjct: 428 WGHRIPAWYDDAGNVYVPDLENPDLDCDQDPRYAHLNLRRDPDVFDTWFSSNLWPFSTLG 487 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILH-KG 300 + D KF+P + V G DIL F + A+ + P + HG L KG Sbjct: 488 WPDEASEDYRKFYPTQVLVTGYDILFFWVARMQMAAYHFTGRAPF-STIMLHGLYLDAKG 546 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKS GN +DP+E+ E+ GVDA R+ G+D +D ++ N AN + N Sbjct: 547 QKMSKSKGNGVDPLELFEQYGVDAARFAFTYLSTGGQDIKHDPRRFEQGRN--FANKLWN 604 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 +R M L+ P G T +D I S + ++E+ ++ I A+ + Sbjct: 605 -AARFAFMNLEGE----PEAGEATLADRWIRSRLNDTVREVTAHLDAFDIGAAIRTAYAF 659 Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + D Y +A KP L+ N +T+ +V+ + LL F+P + ++I++ L Sbjct: 660 TWDEFCDWYIEAAKP-ALRARNAATRATL----KDVLEGILKLLHPFMPFITSEIYEAL 713 Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 11/56 (19%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76 H+GHA + + D L R+ R+ G + L+ GTD +AG++T+V V++ Sbjct: 61 HLGHALDNTLIDTLIRYKRMAGFEALYLPGTD-----------HAGISTQVVVERQ 105 >gi|169824504|ref|YP_001692115.1| valyl-tRNA synthetase [Finegoldia magna ATCC 29328] gi|167831309|dbj|BAG08225.1| valyl-tRNA synthetase [Finegoldia magna ATCC 29328] Length = 872 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 89/352 (25%), Positives = 155/352 (44%), Gaps = 38/352 (10%) Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 H+ V+ + + +F ++ L Y+ +P ++++++ ++D +SR+ Sbjct: 349 HSTVEPLISKQWFVKMDKLAKLALDAYKKEEIRFIPKRFEKVYVNWLEN-IRDWCISRQL 407 Query: 214 FDWGIKIP----------------DDPQY------IMYVWIDALTNYLTTTGYLDNPDGS 251 + WG ++P DPQ + W + +T G+ + + Sbjct: 408 W-WGHRLPVYYHNETGEVVVARENPDPQKYTQDPDTLDTWFSSALWPFSTLGWPNETEDL 466 Query: 252 KAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLG 308 K F+P ++ V G DI+ F I + + +P K V+ G + +G K+SKSLG Sbjct: 467 KY-FFPTNVLVTGYDIIFFWVIRMVFSSLYNLGEVPF-KDVYLTGLVKDSQGRKMSKSLG 524 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDG-FYDKDGLKKRVNADLANGIGNLVSRSVS 367 N IDPIEVI++ G DALR+ L+ G D FY + K N + N + N SR V Sbjct: 525 NGIDPIEVIDQYGADALRFALITGNTPGNDSRFYME---KVEANRNFCNKLWN-ASRFVF 580 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--D 425 M ++D I E D+ I+S + V+ E+ N+ I A ++ V D Sbjct: 581 MNVEDNVKNIDEVELQIE-DKWIISSLNNVIDEVSTNLNKYEIGIAAEKIYDFTWNVFCD 639 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y + KP L N + + V + + + LL F+P + +I+ L Sbjct: 640 WYIELVKP-RLYGDNAKLKDSAISVLIYTLTNVIKLLHPFMPYITEEIYSYL 690 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 5/72 (6%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 H+GHA I D+L R +R+DG L+ GTD A A A V K+ + S+ Sbjct: 52 HLGHALNNTIQDILIRKNRMDGYSALWVPGTDH-----ASIATEAKVVNKLKEEGKSKES 106 Query: 81 RDMADVLDISYD 92 L+ S+D Sbjct: 107 LGRDGFLEASWD 118 >gi|291556681|emb|CBL33798.1| valyl-tRNA synthetase [Eubacterium siraeum V10Sc8a] Length = 882 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 74/246 (30%), Positives = 123/246 (50%), Gaps = 22/246 (8%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL------PLPKKVFSHGFILHK-GEKISKSL 307 F+P + V G DI+ F W A ++ + L P K V HG + + G K+SKSL Sbjct: 478 FYPTNTLVTGYDIIPF----WVARMIFSGLEHTGQKPF-KDVLIHGLVRDELGRKMSKSL 532 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN +DP+EVI++ G DALR LV A G D + + + N AN + N SR + Sbjct: 533 GNGVDPLEVIDKYGADALRLTLVTGNAPGNDMRWTETKVTNSRN--FANKLWN-ASRYIL 589 Query: 368 MIL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-- 424 M L +D G + P D+ ILS+ + +++ + N+ + + A+ + + +V Sbjct: 590 MNLPEDMQGAV-LPENLPIEDKWILSLYNDLIKNVTSNLDSYELGVAVQNLFDFIWDVYC 648 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADEN 483 D Y + KP + RA+ V V V++ + LL F+P + +I+ + VAD++ Sbjct: 649 DWYIELTKPRIAEGGETARAAQ--NVLVYVMQGILKLLHPFMPFITEEIWQSMPIVADKD 706 Query: 484 RCFQSL 489 +S+ Sbjct: 707 NNPESI 712 Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 6/65 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN Q H+GHA + + D+L R+ R+ G L+ GTD KI A + Sbjct: 40 TIVIPPPNITGQLHMGHALDNTLQDILIRYKRMQGYSALWLPGTDHASIATEAKIVNAMK 99 Query: 64 NAGVT 68 G+T Sbjct: 100 EEGLT 104 >gi|168214160|ref|ZP_02639785.1| valyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|170714391|gb|EDT26573.1| valyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] Length = 880 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 125/269 (46%), Gaps = 24/269 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D D + F+P V G DI+ F W A ++ + + Sbjct: 450 VLDTWFSSALWPFSTLGWPDRTDDLEF-FYPTSTLVTGYDIIFF----WVARMIFSGIHN 504 Query: 285 ----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 P V HG I +G K+SKSLGN +DP+EVI+E G DALR+ LV A G D Sbjct: 505 MGETPF-DTVLIHGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDI 563 Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSR 396 Y + +RV A + AN I N SR V M L ++ ++ +D+ ILS + Sbjct: 564 RY----IPERVEAARNFANKIWN-ASRFVMMNLDRELMDKYKDCKEYSLADQWILSRMNS 618 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 +++E+ ENM+ + AL +V + D Y + KP L + V V V Sbjct: 619 LIKEVTENMEKYELGIALQKVHDFLWTEFCDYYIELVKP-VLYGDDEKAKGVVFNVLYTV 677 Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN 483 + LL +P + +I+ L E+ Sbjct: 678 LNTGLKLLHPVMPFITEEIYTHLSTETES 706 >gi|291458879|ref|ZP_06598269.1| valine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262] gi|291418133|gb|EFE91852.1| valine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262] Length = 904 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 71/242 (29%), Positives = 111/242 (45%), Gaps = 23/242 (9%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVI 311 F+P D+ V DI+ F + + + LP + V HG + +G K+SKSLGN I Sbjct: 476 FYPTDVLVTAYDIIFFWVVRMVFSGIEQTGKLPF-RHVLIHGLVRDDQGRKMSKSLGNGI 534 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDG--FYDKDGLKKRVNADLANG----IGNLVSRS 365 DP+EVI + G DALR L+ A G D ++ K + + N + NL S Sbjct: 535 DPLEVIRKYGADALRMTLLSGNAPGNDMRFYWSKAEAGRNFMNKVWNASRFIMMNLDEES 594 Query: 366 VSMILKDYDGMI------PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 +S++ + G + P +D ILS + QEI N+ + + AL ++ S Sbjct: 595 LSVLRGEGGGELDAILERSRPKELYAADRWILSRMNHTAQEIERNLSSYDLGIALDKIQS 654 Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFD 475 + E D + + KP + DR S + L+ EV+ LL F P + +I+D Sbjct: 655 FLWEEFCDWFIEMVKP---RLHGEDRESRIAALWTLCEVLMCSLKLLHPFCPFITEEIYD 711 Query: 476 IL 477 L Sbjct: 712 TL 713 >gi|312871640|ref|ZP_07731732.1| valine--tRNA ligase [Lactobacillus iners LEAF 3008A-a] gi|311092865|gb|EFQ51217.1| valine--tRNA ligase [Lactobacillus iners LEAF 3008A-a] Length = 879 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 39/268 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+LS + + ER + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQLW-WGHRIPAWY 418 Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 D ++ W + +T G+ D +++P + Sbjct: 419 NKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFKRYFPTNAL 478 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315 V G DI+ F W + ++ +L K+ V HG I +G K+SKSLGN IDP++ Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGIDPMD 534 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373 V+E+ G D+LR+FL+ A G+D + + N N I N SR V M L + Sbjct: 535 VVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPEDAA 591 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F SD+ I +RV++++ Sbjct: 592 AAHMPDVDTFDLSDKWIFDKLNRVVKKV 619 Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 25/165 (15%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA 59 S I PN + H+GHA++ I D L RF R+ G D L+ G D G +K+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEEKLR 98 Query: 60 KAAQNAGVTTKVFVDQNSRNFRD------------MADVLDISYDDFIRTTEKRHHDTCR 107 K Q+ + + +++D M LD S + F T + R Sbjct: 99 KQGQDRHQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERF--TLDDGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYN 151 ++ K+ ++G IY+G Y + + E +D EV +K +G +Y+ Sbjct: 157 KVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYH 201 >gi|312873260|ref|ZP_07733316.1| valine--tRNA ligase [Lactobacillus iners LEAF 2052A-d] gi|311091271|gb|EFQ49659.1| valine--tRNA ligase [Lactobacillus iners LEAF 2052A-d] Length = 879 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 39/268 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+LS + + ER + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQLW-WGHRIPAWY 418 Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 D ++ W + +T G+ D +++P + Sbjct: 419 NKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFKRYFPTNAL 478 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315 V G DI+ F W + ++ +L K+ V HG I +G K+SKSLGN IDP++ Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGIDPMD 534 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373 V+E+ G D+LR+FL+ A G+D + + N N I N SR V M L + Sbjct: 535 VVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPEDAA 591 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F SD+ I +RV++++ Sbjct: 592 AAHMPDVDTFDLSDKWIFDKLNRVVKKV 619 Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 25/165 (15%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA 59 S I PN + H+GHA++ I D L RF R+ G D L+ G D G +K+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEEKLR 98 Query: 60 KAAQNAGVTTKVFVDQNSRNFRD------------MADVLDISYDDFIRTTEKRHHDTCR 107 K Q+ + + +++D M LD S + F T + R Sbjct: 99 KQGQDRHQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERF--TLDDGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYN 151 ++ K+ ++G IY+G Y + + E +D EV +K +G +Y+ Sbjct: 157 KVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYH 201 >gi|75759956|ref|ZP_00740025.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218899626|ref|YP_002448037.1| valyl-tRNA synthetase [Bacillus cereus G9842] gi|74492553|gb|EAO55700.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218541207|gb|ACK93601.1| valyl-tRNA synthetase [Bacillus cereus G9842] Length = 881 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 85/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ D +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+RYFL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|167751126|ref|ZP_02423253.1| hypothetical protein EUBSIR_02111 [Eubacterium siraeum DSM 15702] gi|167655841|gb|EDR99970.1| hypothetical protein EUBSIR_02111 [Eubacterium siraeum DSM 15702] Length = 882 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 74/246 (30%), Positives = 123/246 (50%), Gaps = 22/246 (8%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL------PLPKKVFSHGFILHK-GEKISKSL 307 F+P + V G DI+ F W A ++ + L P K V HG + + G K+SKSL Sbjct: 478 FYPTNTLVTGYDIIPF----WVARMIFSGLEHTGQKPF-KDVLIHGLVRDELGRKMSKSL 532 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN +DP+EVI++ G DALR LV A G D + + + N AN + N SR + Sbjct: 533 GNGVDPLEVIDKYGADALRLTLVTGNAPGNDMRWTETKVTNSRN--FANKLWN-ASRYIL 589 Query: 368 MIL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-- 424 M L +D G + P D+ ILS+ + +++ + N+ + + A+ + + +V Sbjct: 590 MNLPEDMQGAV-LPENLPIEDKWILSLYNDLIKNVTSNLDSYELGVAVQNLFDFIWDVYC 648 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADEN 483 D Y + KP + RA+ V V V++ + LL F+P + +I+ + VAD++ Sbjct: 649 DWYIELTKPRIAEGGETARAAQ--NVLVYVMQGILKLLHPFMPFITEEIWQSMPIVADKD 706 Query: 484 RCFQSL 489 +S+ Sbjct: 707 NNPESI 712 Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 6/65 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN Q H+GHA + + D+L R+ R+ G L+ GTD KI A + Sbjct: 40 TIVIPPPNITGQLHMGHALDNTLQDILIRYKRMQGYSALWLPGTDHASIATEAKIVNAMK 99 Query: 64 NAGVT 68 G+T Sbjct: 100 EEGLT 104 >gi|223939187|ref|ZP_03631069.1| valyl-tRNA synthetase [bacterium Ellin514] gi|223892140|gb|EEF58619.1| valyl-tRNA synthetase [bacterium Ellin514] Length = 882 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 94/373 (25%), Positives = 156/373 (41%), Gaps = 47/373 (12%) Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189 L++ Y+ DE YK G Y P++ E +F + + Q S E Sbjct: 335 LKELGSYDKDEPYKNNVG-YSERADVPIEPRLSEQWFLKYPSTQPA--REVASSGEMRFF 391 Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------------DDPQYIMY 229 ER +V ++D +SR+ + WG +IP DP ++ Sbjct: 392 PERWGKVYDHWMQNIQDWCISRQLW-WGHQIPVWYRGHEVKCQVDSPGADWKQDPD-VLD 449 Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289 W +++L +D + +KAKF+P + V G DI+ F W A ++ A K Sbjct: 450 TW---FSSWLWPFATMD--EATKAKFYPTSVLVTGPDIIFF----WVARMIMAGFEYTGK 500 Query: 290 -----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 V+ G I K G K+SK+LGN DP+E+I + G D LR+ ++R G+D +D+ Sbjct: 501 KPFSDVYLTGIIRDKQGRKLSKTLGNSPDPLELIGKYGADGLRFGIMRSAPLGQDVLFDE 560 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 ++ + + N + N R M + G I P T D+ IL + ++E+ Sbjct: 561 KDVE--LGRNFCNKLWN-ACRFRQMQDGEVQGEI-NPSKLTGDDKWILLRLNTAIEELNT 616 Query: 404 NMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461 ++ A + SE D Y +A K L T+ + L V V+ L Sbjct: 617 SLAEYKFSEATQTLYRFFWSEYCDWYVEASKA-VLHGTDEAAKANTLAVLDFVLSHTLRL 675 Query: 462 LQAFVPKLANKIF 474 FVP + +++ Sbjct: 676 FHPFVPFITEELW 688 >gi|315180776|gb|ADT87690.1| methionyl-tRNA synthetase [Vibrio furnissii NCTC 11218] Length = 376 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 11/191 (5%) Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDG 345 P VF HG++ G K+SKS G + + + + LRY+ ++ D + + Sbjct: 10 PNNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNSRIDDLDLNLED 69 Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV--LQEIRE 403 +RVNAD+ N I NL SR+ I K +DG + A E ++ R+ L E RE Sbjct: 70 FTQRVNADVVNKIVNLASRNAGFITKRFDGKLSDRFAEPELYNEFVAAADRIAELYEARE 129 Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVLYVTVEVIRQLAIL 461 RA+ ++ +L + ++Y D + PW + K+ D+A + V + + R L Sbjct: 130 ------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGINLFRVLLTY 183 Query: 462 LQAFVPKLANK 472 L+ +P LA + Sbjct: 184 LKPVMPGLAAR 194 >gi|293363815|ref|ZP_06610555.1| valine--tRNA ligase [Mycoplasma alligatoris A21JP2] gi|292552620|gb|EFF41390.1| valine--tRNA ligase [Mycoplasma alligatoris A21JP2] Length = 830 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 83/349 (23%), Positives = 153/349 (43%), Gaps = 45/349 (12%) Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208 Y + + PV+ + +F ++ + +L + +S +R +++ S + D + Sbjct: 342 YSDRSNTPVEILVLPQWFVKMENFGKIILEHLQSKNRVDFYPKRFVKILKHWMSNVHDWT 401 Query: 209 LSRKTFDWGIKIP--------------------DDPQYIMYVWIDALTNYLTTTGYLDNP 248 +SR+ + WG +IP DP ++ W + + G+ N Sbjct: 402 ISRQLW-WGHRIPAWYKDDQIKVQIESPGLGWVQDPD-VLDTWFSSGLSPFVFLGWPQN- 458 Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILH-KGEKISKS 306 D +++P D+ V G D++ F F L P K + HG I +G K+SKS Sbjct: 459 DKMLKRYYPTDVLVTGSDLIFFWIARMYMFGLDVMKEKPFKHLLIHGLIRDAQGRKMSKS 518 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 L N IDP++VI E G DAL++FL+ + G D Y + LK L N + N +SR + Sbjct: 519 LNNGIDPLDVINEYGADALKWFLITNTSPGLDIKYSTEKLKSA--WALCNKLWN-ISRFI 575 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426 + +D + T++D+ I + +++ I + M+N +Q+ + Sbjct: 576 EQLPQDQNTKA------TDADKWINNKLQVLIKNIDKAMKNYEFTLVGSQISKFI----- 624 Query: 427 YFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 Y D + E K+NP + +E+++ I + F+ + KIF Sbjct: 625 YTDLSGWYVEFLKSNPSKK-----FAMELLKNTLIAINPFLSFITYKIF 668 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 PN + H+GHA++ +I D + R+ +L G D + +G D G IA A+ Sbjct: 42 PNVTGKLHLGHAFDTMIPDTIIRYKKLKGFDTFWISGMDHAG--IATQAK 89 >gi|55980130|ref|YP_143427.1| leucyl-tRNA synthetase [Thermus thermophilus HB8] gi|55771543|dbj|BAD69984.1| leucyl-tRNA synthetase [Thermus thermophilus HB8] Length = 878 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 7/193 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K Y+ YP+ H+GH + DVLARF R+ G +VL G D G AA Sbjct: 32 RGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAAL 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 GV K + +N R ++ ++ I Y D + T E ++ + ++ K+ +KG Y+ Sbjct: 92 KFGVHPKDWTYENIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYR 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + + +++V +G+ + + PV+ E E ++ R++AY ++LL E Sbjct: 152 AKGLVNWCPKCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLE 208 Query: 182 --SHPEFILPIER 192 + PE + ++R Sbjct: 209 GLNWPEKVKAMQR 221 >gi|291531784|emb|CBK97369.1| valyl-tRNA synthetase [Eubacterium siraeum 70/3] Length = 882 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 74/246 (30%), Positives = 123/246 (50%), Gaps = 22/246 (8%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL------PLPKKVFSHGFILHK-GEKISKSL 307 F+P + V G DI+ F W A ++ + L P K V HG + + G K+SKSL Sbjct: 478 FYPTNTLVTGYDIIPF----WVARMIFSGLEHTGQKPF-KDVLIHGLVRDELGRKMSKSL 532 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN +DP+EVI++ G DALR LV A G D + + + N AN + N SR + Sbjct: 533 GNGVDPLEVIDKYGADALRLTLVTGNAPGNDMRWTETKVTNSRN--FANKLWN-ASRYIL 589 Query: 368 MIL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-- 424 M L +D G + P D+ ILS+ + +++ + N+ + + A+ + + +V Sbjct: 590 MNLPEDMQGAV-LPENLPIEDKWILSLYNDLIKNVTSNLDSYELGVAVQNLFDFIWDVYC 648 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADEN 483 D Y + KP + RA+ V V V++ + LL F+P + +I+ + VAD++ Sbjct: 649 DWYIELTKPRIAEGGETARAAQ--NVLVYVMQGILKLLHPFMPFITEEIWQSMPIVADKD 706 Query: 484 RCFQSL 489 +S+ Sbjct: 707 NNPESI 712 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 6/65 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I+ PN Q H GHA + + D+L R+ R+ G L+ GTD KI A + Sbjct: 40 TIVISPPNITGQLHTGHALDNTLQDILIRYKRMQGYSALWLPGTDHASIATEAKIVNAMK 99 Query: 64 NAGVT 68 G+T Sbjct: 100 EEGLT 104 >gi|302671511|ref|YP_003831471.1| valyl-tRNA synthetase ValS [Butyrivibrio proteoclasticus B316] gi|302395984|gb|ADL34889.1| valyl-tRNA synthetase ValS [Butyrivibrio proteoclasticus B316] Length = 890 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 14/229 (6%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P D+ V G DI+ F I + ++ P +F HG + +G K+SKSLGN I Sbjct: 482 FFPTDVLVTGYDIIFFWVIRMIFSSYENMGTYPFHTVLF-HGLVRDSQGRKMSKSLGNGI 540 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSM-I 369 DP+++IE G DALR L+ A G D FY++ R + AN + N SR + M + Sbjct: 541 DPLDIIENYGADALRLTLITGNAPGNDMRFYNERVENSR---NFANKVWN-ASRFIMMNM 596 Query: 370 LKDYDGMI--PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425 +D I P D+ ILS + ++E+ ENM++ + A+ +V + + D Sbjct: 597 AEDAKSAIHQDMPEGLEPVDKWILSKLNNTVKEVTENMEHYELGIAVQKVYDFIWDEFCD 656 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 Y + KP + L+ V+ LL ++P + +IF Sbjct: 657 WYIEMVKPRLYNSDDAVSHEAALWTLQTVLLNALKLLHPYMPFITEEIF 705 >gi|229163414|ref|ZP_04291365.1| Valyl-tRNA synthetase [Bacillus cereus R309803] gi|228619983|gb|EEK76858.1| Valyl-tRNA synthetase [Bacillus cereus R309803] Length = 867 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 85/349 (24%), Positives = 149/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K + + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 350 WFVKMAPLAEKAVELQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ D +++ D Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRYYSTD 467 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+RYFL A G+D + + ++ N N I N SR V M + D Sbjct: 524 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686 Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T ++ D Sbjct: 87 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 146 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194 >gi|167630790|ref|YP_001681289.1| valyl-tRNA synthetase [Heliobacterium modesticaldum Ice1] gi|167593530|gb|ABZ85278.1| valyl-tRNA synthetase [Heliobacterium modesticaldum Ice1] Length = 894 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 103/375 (27%), Positives = 159/375 (42%), Gaps = 53/375 (14%) Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204 A GQ Y V+ M +F R+ + + ++ +P ER ++ + Sbjct: 346 AVGQCYRCD-TVVEPMVSPQWFVRMKPLAEPAMEVVKNGRLKFVP-ERFTKIYLGWLENI 403 Query: 205 KDLSLSRKTFDWGIKIP----DDPQYIMYVWIDALTNYLTTTG---YLDNPD-------- 249 +D +SR+ + WG +IP DD YI + L G + +PD Sbjct: 404 RDWCISRQLW-WGHRIPVWYCDDCDYIYCGRAEELPEVCPKCGASHFEQDPDVLDTWFSS 462 Query: 250 --------------GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKV 290 K++P + V G+DI+ F W A ++ L +P ++V Sbjct: 463 GLWPFSTLGWPEKTPELVKYYPTSVLVTGRDIIFF----WVARMVFMGLEFMGDVPFREV 518 Query: 291 FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 F HG IL +G K+SKSLGN +DPIE+I++ G D LR+ LV G D + + L+ Sbjct: 519 FIHGLILDAQGRKMSKSLGNGVDPIEIIDQYGADTLRFMLVTGNTPGNDIRFHFERLEGI 578 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 N AN I N SR V M L+ + P G T +D ILS +R++ E ++ Sbjct: 579 RN--FANKIWN-ASRFVLMNLEGFAIHQPW-GELTLADRWILSRYNRLIGETTAALERYD 634 Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKT--NPDRAS---TVLYVTVEVIRQLAILL 462 + A + + D Y + KP K D A+ T V V+R LL Sbjct: 635 LGEAARLLYEFLWNEYCDWYIELAKPRLYGKEVGVADAAASRQTAQQVLTYVLRGTLQLL 694 Query: 463 QAFVPKLANKIFDIL 477 F+P L +I+ L Sbjct: 695 HPFMPFLTEEIWQQL 709 Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 22/122 (18%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTT-----KV 71 H+GHA + + D+L+RF R+ G VL+ GTD G K+ +A G++ + Sbjct: 57 HLGHAMDNTLQDILSRFKRMQGYHVLWVPGTDHAGIATQAKVEEALAKEGLSKYDLGREA 116 Query: 72 FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 F+++ + R + D + + F T ++ + + ++ ++ +KG IY Sbjct: 117 FLERVWDWKHQYGTRITTQLRTLGTSCDWTRERF--TMDEGCSEAVQEVFIRLYEKGLIY 174 Query: 121 KG 122 +G Sbjct: 175 RG 176 >gi|20807263|ref|NP_622434.1| valyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] gi|81482270|sp|Q8RBN5|SYV_THETN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|20515771|gb|AAM24038.1| Valyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] Length = 879 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 88/323 (27%), Positives = 146/323 (45%), Gaps = 47/323 (14%) Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDP------------ 224 ER ++ + +KD +SR+ + WG +IP +DP Sbjct: 386 ERFEKIYTNWLENIKDWCISRQLW-WGHRIPAWYCEDCGHVTVSREDPVKCEVCGSTNIH 444 Query: 225 --QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 + ++ W + +T G+ + + K F+P D+ V G DI+ F W A ++ Sbjct: 445 QDENVLDTWFSSALWPFSTMGWPEETEDLKY-FYPTDVLVTGYDIIFF----WVARMIFM 499 Query: 283 NLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 +L K+ V HG + G K+SKSLGN IDP+EVIE+ G D LR+ LV A G Sbjct: 500 SLEFMKEIPFKYVLIHGLVRDALGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPG 559 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396 D + + ++ N AN + N SR V + L + D + +D+ IL+ + Sbjct: 560 NDMRFSWEKVEHSRN--FANKLWN-ASRYVLLNLDENDTNLYLDN-LALADKWILTRYNN 615 Query: 397 VLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 +++EI +N++ + A +++ V SE D Y + KP L N + V V Sbjct: 616 IVKEITDNLEKFELGVAASKLYDFVWSEFCDWYIELSKP-VLYSDNEEAKKVTKSVLRYV 674 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 + LL F+P + +I+ L Sbjct: 675 LDNTLRLLHPFMPFITEEIWQNL 697 Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 27/142 (19%) Query: 5 EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----QK 57 EK + I PN + H+GHA + + D+L R+ R+ G L+ GTD + Sbjct: 34 EKKPFTIVIPPPNVTGELHMGHALDNTLQDILIRWRRMQGYAALWIPGTDHASIATEIKV 93 Query: 58 IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC----------- 106 + K + G T K D F + A Y++ I + K+ +C Sbjct: 94 LDKIREETGKTKK---DLTREEFLEKAWEWKDKYENRILSQLKKLGSSCDWTRTAFTMDE 150 Query: 107 ------RILWKKISDKGDIYKG 122 R ++ + +KG IYKG Sbjct: 151 KRSKAVREVFVSLYEKGLIYKG 172 >gi|110802251|ref|YP_699196.1| valyl-tRNA synthetase [Clostridium perfringens SM101] gi|110682752|gb|ABG86122.1| valine--tRNA ligase [Clostridium perfringens SM101] Length = 880 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 125/269 (46%), Gaps = 24/269 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D D + F+P V G DI+ F W A ++ + + Sbjct: 450 VLDTWFSSALWPFSTLGWPDRTDDLEF-FYPTSTLVTGYDIIFF----WVARMIFSGIHN 504 Query: 285 ----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 P V HG I +G K+SKSLGN +DP+EVI+E G DALR+ LV A G D Sbjct: 505 MGETPF-DTVLIHGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDI 563 Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSR 396 Y + +RV A + AN I N SR V M L ++ ++ +D+ ILS + Sbjct: 564 RY----IPERVEAARNFANKIWN-ASRFVMMNLDRELMDKYKDCKEYSLADKWILSRMNS 618 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 +++E+ ENM+ + AL +V + D Y + KP L + V V V Sbjct: 619 LIKEVTENMEKYELGIALQKVHDFLWTEFCDYYIELVKP-VLYGDDEKAKGVVFNVLYTV 677 Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN 483 + LL +P + +I+ L E+ Sbjct: 678 LNTGLKLLHPVMPFITEEIYTHLSTETES 706 >gi|229062152|ref|ZP_04199476.1| Valyl-tRNA synthetase [Bacillus cereus AH603] gi|228717135|gb|EEL68811.1| Valyl-tRNA synthetase [Bacillus cereus AH603] Length = 867 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 86/349 (24%), Positives = 149/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K + + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 350 WFVKMAPLAEKAVELQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + KF+ D Sbjct: 408 WYHKETGEVYVGTEAPADLENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKKFYSTD 467 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+RYFL A G+D + + ++ N N I N SR V M + D Sbjct: 524 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686 Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEG 85 >gi|294784860|ref|ZP_06750148.1| leucine--tRNA ligase [Fusobacterium sp. 3_1_27] gi|294486574|gb|EFG33936.1| leucine--tRNA ligase [Fusobacterium sp. 3_1_27] Length = 859 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + + YP+ + H+GHA I DV++R+ R+ G +VL G D G AA Sbjct: 32 KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G ++ N N R ++ SYD I + ++ + L+K++ +KG IYK Sbjct: 92 QNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + +++V DG + V E E +FF+++ Y D+LL +E Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208 Query: 182 ----SHPEFILPIER 192 PE +L +++ Sbjct: 209 EIKDGWPEKVLTMQK 223 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 91/180 (50%), Gaps = 15/180 (8%) Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K EK+SKS N +DP E++++ G D R F++ K+ ++++GL + Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417 LV + ++ D + ++ D+++L ++ ++++ + ++N + A+A Sbjct: 666 WRLVFENSELVKNANDEI--DYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFNTAIAAN 723 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + L++EV Y + N ++A+ +L T ++++ I+L FVP ++I++ L Sbjct: 724 MELINEVQTYVSSS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 773 >gi|296111094|ref|YP_003621475.1| valyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154] gi|295832625|gb|ADG40506.1| valyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154] Length = 894 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 76/265 (28%), Positives = 119/265 (44%), Gaps = 28/265 (10%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280 DP ++ W + +T G+ +N A+++P + V G DI+ F W A ++ Sbjct: 456 DPD-VLDTWFSSALWPFSTMGWPENQTDDFARYYPTNTLVTGYDIIFF----WVARMMFQ 510 Query: 281 ----SANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 + P K V HG I +G K+SKSLGN +DP++VIE+ G DALR+FL Sbjct: 511 GKEFTGQRPF-KNVLIHGLIRDGEGRKMSKSLGNGVDPMDVIEKYGADALRWFLATGSTP 569 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVC 394 G+D + D + N N I N SR V M L D +P + D+ ILS Sbjct: 570 GQDVRFTYDKMDAAWN--FINKIWN-ASRYVIMNLDDDTPSTLPDVDKLSLGDKWILSRL 626 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA---STVLY 449 ++ + + N A ++ + + D Y + K E D+A T+ Y Sbjct: 627 NKTIAHVTRNFDKFEFGEAGRELYNFIWSDFADWYIEMTK--ETLNGRGDKAPVQQTLAY 684 Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474 V + +R LLQ +P + I+ Sbjct: 685 VLDQTLR----LLQPIMPFVTEAIW 705 Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 23/155 (14%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-----TKV 71 H+GHA++ + D++ R ++ GLDVL+ G D G K+ + ++ GV+ + Sbjct: 59 HLGHAWDTTLQDMIIRQKKMQGLDVLWLPGMDHAGIATQAKVEQRLRSEGVSRYDLGREK 118 Query: 72 FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 FV+Q + + M LD + F T + + ++ + +KG IY Sbjct: 119 FVEQVWDWKNEYAATIKQQWGKMGLSLDFDRERF--TLDDGLNKAVNKVFIDLYNKGLIY 176 Query: 121 KGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 +G Y W A + + +Y+ G +Y+ Q+ Sbjct: 177 RGEYIINWDPQARTALSDIEVIYQDDPGAFYHVQY 211 >gi|229013673|ref|ZP_04170802.1| Valyl-tRNA synthetase [Bacillus mycoides DSM 2048] gi|229135303|ref|ZP_04264098.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|228648172|gb|EEL04212.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|228747595|gb|EEL97469.1| Valyl-tRNA synthetase [Bacillus mycoides DSM 2048] Length = 867 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 86/349 (24%), Positives = 149/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K + + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 350 WFVKMAPLAEKAVELQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + KF+ D Sbjct: 408 WYHKETGEVYVGTEAPADLENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKKFYSTD 467 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+RYFL A G+D + + ++ N N I N SR V M + D Sbjct: 524 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686 Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEG 85 >gi|163942206|ref|YP_001647090.1| valyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|163864403|gb|ABY45462.1| valyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] Length = 881 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 86/349 (24%), Positives = 149/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K + + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAVELQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + KF+ D Sbjct: 422 WYHKETGEVYVGTEAPADFENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKKFYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+RYFL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEG 99 >gi|168208620|ref|ZP_02634245.1| valyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] gi|170713145|gb|EDT25327.1| valyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] Length = 880 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 81/270 (30%), Positives = 130/270 (48%), Gaps = 26/270 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D D + F+P V G DI+ F W A ++ + + Sbjct: 450 VLDTWFSSALWPFSTLGWPDRTDDLEF-FYPTSTLVTGYDIIFF----WVARMIFSGIHN 504 Query: 285 ----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 P V HG I +G K+SKSLGN +DP+EVI+E G DALR+ LV A G D Sbjct: 505 MGETPF-DTVLIHGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDI 563 Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSR 396 Y + +RV A + AN I N SR V M L ++ ++ +D+ ILS + Sbjct: 564 RY----IPERVEAARNFANKIWN-ASRFVMMNLDRELMDKYKDCKEYSLADKWILSRMNS 618 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY-VTVE 453 +++E+ ENM+ + AL +V + D Y + KP + + ++A V++ V Sbjct: 619 LIKEVTENMEKYELGIALQKVHDFLWTEFCDYYIELVKP--VLYGDDEKAKGVVFNVLYT 676 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483 V+ LL +P + +I+ L E+ Sbjct: 677 VLNTGLKLLHPVMPFITEEIYTHLSTETES 706 >gi|169343619|ref|ZP_02864618.1| valyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] gi|169298179|gb|EDS80269.1| valyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] Length = 880 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 81/270 (30%), Positives = 130/270 (48%), Gaps = 26/270 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D D + F+P V G DI+ F W A ++ + + Sbjct: 450 VLDTWFSSALWPFSTLGWPDRTDDLEF-FYPTSTLVTGYDIIFF----WVARMIFSGIHN 504 Query: 285 ----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 P V HG I +G K+SKSLGN +DP+EVI+E G DALR+ LV A G D Sbjct: 505 MGETPF-DTVLIHGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDI 563 Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSR 396 Y + +RV A + AN I N SR V M L ++ ++ +D+ ILS + Sbjct: 564 RY----IPERVEAARNFANKIWN-ASRFVMMNLDRELMDKYKDCKEYSLADKWILSRMNS 618 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY-VTVE 453 +++E+ ENM+ + AL +V + D Y + KP + + ++A V++ V Sbjct: 619 LIKEVTENMEKYELGIALQKVHDFLWTEFCDYYIELVKP--VLYGDDEKAKGVVFNVLYT 676 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483 V+ LL +P + +I+ L E+ Sbjct: 677 VLNTGLKLLHPVMPFITEEIYTHLSTETES 706 >gi|254302086|ref|ZP_04969444.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322278|gb|EDK87528.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 859 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + + YP+ + H+GHA I DV++R+ R+ G +VL G D G AA Sbjct: 32 KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G ++ N N R ++ SYD I + ++ + L+K++ +KG IYK Sbjct: 92 QNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + +++V DG + V E E +FF+++ Y D+LL +E Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208 Query: 182 ----SHPEFILPIER 192 PE +L +++ Sbjct: 209 EIKDGWPEKVLTMQK 223 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 91/180 (50%), Gaps = 15/180 (8%) Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K EK+SKS N +DP E++++ G D R F++ K+ ++++GL + Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417 LV + ++ D + ++ D+++L ++ ++++ + ++N + A+A Sbjct: 666 WRLVFENSELVKNANDEI--DYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFNTAIAAN 723 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + L++EV Y + N ++A+ +L T ++++ I+L FVP ++I++ L Sbjct: 724 MELINEVQTYVSSS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 773 >gi|256846013|ref|ZP_05551471.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] gi|256719572|gb|EEU33127.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] Length = 859 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + + YP+ + H+GHA I DV++R+ R+ G +VL G D G AA Sbjct: 32 KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G ++ N N R ++ SYD I + ++ + L+K++ +KG IYK Sbjct: 92 QNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + +++V DG + V E E +FF+++ Y D+LL +E Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208 Query: 182 ----SHPEFILPIER 192 PE +L +++ Sbjct: 209 EIKDGWPEKVLTMQK 223 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 92/180 (51%), Gaps = 15/180 (8%) Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K EK+SKS N +DP E++++ G D R F++ K+ ++++GL + Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417 LV + +I K D + ++ D+++L ++ ++++ + ++N + A+A Sbjct: 666 WRLVFENSELIKKSNDKI--DYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFNTAIAAN 723 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + L++EV Y + N ++A+ +L T ++++ I+L FVP ++I++ L Sbjct: 724 MELINEVQTYVSSS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 773 >gi|19704849|ref|NP_602344.1| leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|32171570|sp|Q8RIQ3|SYL_FUSNN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|19712730|gb|AAL93643.1| Leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 859 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + + YP+ + H+GHA I DV++R+ R+ G +VL G D G AA Sbjct: 32 KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G ++ N N R ++ SYD I + ++ + L+K++ +KG IYK Sbjct: 92 QNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + +++V DG + V E E +FF+++ Y D+LL +E Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208 Query: 182 ----SHPEFILPIER 192 PE +L +++ Sbjct: 209 EIKDGWPEKVLTMQK 223 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 91/180 (50%), Gaps = 15/180 (8%) Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K EK+SKS N +DP E++++ G D R F++ K+ ++++GL + Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417 LV + ++ D + ++ D+++L ++ ++++ + ++N + A+A Sbjct: 666 WRLVFENSELVKNANDEI--DYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFNTAIAAN 723 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + L++EV Y + N ++A+ +L T ++++ I+L FVP ++I++ L Sbjct: 724 MELINEVQTYVSSS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 773 >gi|110801210|ref|YP_696599.1| valyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|110675857|gb|ABG84844.1| valyl-tRNA synthetase [Clostridium perfringens ATCC 13124] Length = 880 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 81/270 (30%), Positives = 130/270 (48%), Gaps = 26/270 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D D + F+P V G DI+ F W A ++ + + Sbjct: 450 VLDTWFSSALWPFSTLGWPDRTDDLEF-FYPTSTLVTGYDIIFF----WVARMIFSGIHN 504 Query: 285 ----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 P V HG I +G K+SKSLGN +DP+EVI+E G DALR+ LV A G D Sbjct: 505 MGETPF-DTVLIHGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDI 563 Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSR 396 Y + +RV A + AN I N SR V M L ++ ++ +D+ ILS + Sbjct: 564 RY----IPERVEAARNFANKIWN-ASRFVMMNLDRELMDKYKDCKEYSLADKWILSRMNS 618 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY-VTVE 453 +++E+ ENM+ + AL +V + D Y + KP + + ++A V++ V Sbjct: 619 LIKEVTENMEKYELGIALQKVHDFLWTEFCDYYIELVKP--VLYGDDEKAKGVVFNVLYT 676 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483 V+ LL +P + +I+ L E+ Sbjct: 677 VLNTGLKLLHPVMPFITEEIYTHLSTETES 706 >gi|332159141|ref|YP_004424420.1| isoleucyl-tRNA synthetase [Pyrococcus sp. NA2] gi|331034604|gb|AEC52416.1| isoleucyl-tRNA synthetase [Pyrococcus sp. NA2] Length = 1067 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 81/334 (24%), Positives = 160/334 (47%), Gaps = 17/334 (5%) Query: 159 WMEEEGYFFRLSAYQD--KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD- 215 W E+G + + ++++ +L E + E I E NE + ++ L L R D Sbjct: 474 WQSEDGEIYVVGSWKELVELAVAIEVNGERIELPEDYNEKLRVIEEKLGPEDLHRPYVDA 533 Query: 216 WGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD-ILRF 270 + IK+ ++ VW D+ + GY N + + K WPAD V G+D + ++ Sbjct: 534 FIIKVNGKEMRRVKDVVDVWFDSGIASWASLGYPRNKELFE-KLWPADFIVEGEDQVTKW 592 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 A +++ + ++V HG++L KG+K+SKSLGN+I P EV+E+ G D R+++ Sbjct: 593 FYSQQAASIVAFDTVPYRRVAMHGYVLDEKGDKMSKSLGNIIRPEEVVEKAGRDTFRFYM 652 Query: 330 VREIACGKDGFYDKDGLKK-RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 + ++ + G+++ R ++ + L S +S+ + + P F E D+ Sbjct: 653 LWATNPWENLRFSWKGIEQVRRMLNILWNVYVLASTYMSLDNFNPRKLKPEKLPFREEDK 712 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDRA 444 ILS + ++ ++ ++ + +A + V E + R++ ++ W ++ +PD+ Sbjct: 713 WILSRVNSLIGKVENGIETFYLTKATRALYDFVVEDLSRWYVRLIRKRLW-VEGEDPDKL 771 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 + Y +V L LL F P +A +I+ L Sbjct: 772 AA-YYTLWKVFDVLTRLLAPFTPYIAEEIYQNLI 804 Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQN 64 K Y Y + H+G A+ II D++ RF + G +V G D HG I K Q Sbjct: 41 KYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVWRQPGYDMHGLPIEVKVEQA 100 Query: 65 AGVTTKVFVDQN 76 G+ TK +++ Sbjct: 101 LGLKTKKEIEEK 112 >gi|254172065|ref|ZP_04878741.1| isoleucyl-tRNA synthetase [Thermococcus sp. AM4] gi|214033961|gb|EEB74787.1| isoleucyl-tRNA synthetase [Thermococcus sp. AM4] Length = 1066 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 81/334 (24%), Positives = 162/334 (48%), Gaps = 25/334 (7%) Query: 159 WMEEEGYFFRLSAYQD--KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 W E+G + + ++++ KL E + E + E NE + ++ L L R D Sbjct: 474 WQAEDGEIYVVGSFEELVKLAVAIEVNGERVELPEDYNEKLRVIEEKLGPEDLHRPYVDA 533 Query: 217 GIKIPDDPQY-----IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKD-IL 268 I + + ++ VW D+ + + LD P + K WPAD V G+D + Sbjct: 534 FIIKVNGKEMKRVRDVVDVWFDS---GIASWASLDYPRNKELFEKLWPADFIVEGEDQVT 590 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 ++ A +++ + + V HG++L KG+K+SKSLGN+I P EV+++ G D R+ Sbjct: 591 KWFYSQQAASVIAFDTVPYRAVAMHGYVLDEKGDKMSKSLGNIIRPEEVVQKEGRDPFRF 650 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDYD--GMIPTPGAFT 384 +++ ++ + GL++ + N + N+ S + M L ++D + P F Sbjct: 651 YMLWATNPWENLRFSWKGLEQ--VKRMLNILWNVYVLSATYMSLDNFDPTKLKPEELPFR 708 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTN 440 E D ILS + +++++ E ++ + +A + + V E + R++ ++ W ++ + Sbjct: 709 EEDRWILSRVNGLIKDVEEGIETFRLTKATRAIYNFVVEDLSRWYVRLIRKRMW-VEGDD 767 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 PD+ ++ Y +V L L+ F P +A +I+ Sbjct: 768 PDKLAS-YYTVWKVFDVLLRLMAPFTPYIAEEIY 800 Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 24/138 (17%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQN 64 K Y Y + H+G A+ II D++ RF + G +V G D HG I K Q Sbjct: 41 KYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVRRQPGFDMHGLPIEVKVEQA 100 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL---------WKKISD 115 G+ TK ++ +I D+FI+ ++ + +I+ W + Sbjct: 101 LGLKTKKDIET------------EIGVDNFIKKCKEFALNNLKIMTEQFKMLGIWMDWDN 148 Query: 116 KGDIYKGCY--SGWYSLR 131 K Y SGW++L+ Sbjct: 149 PYMTIKNEYIESGWFTLK 166 >gi|227903677|ref|ZP_04021482.1| valyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] gi|227868564|gb|EEJ75985.1| valyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] Length = 879 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 71/269 (26%), Positives = 118/269 (43%), Gaps = 41/269 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+L +S + ER + ++ + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLENQKSEGKVNFVPERFEQTLNHWMENVHDWVISRQLW-WGHRIPAWY 418 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D + +++P + Sbjct: 419 NKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTMGWPDTDNPDFKRYFPTNA 477 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPI 314 V G DI+ F W + ++ +L K+ V HG I +G K+SKSLGN IDP+ Sbjct: 478 LVTGYDIIFF----WVSRMIFQSLHFTKERPFKDVVLHGLIRDEQGRKMSKSLGNGIDPM 533 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372 +VI++ G DALR+FL+ A G+D + + N N I N SR V M L + Sbjct: 534 DVIDKYGADALRWFLLNGTAPGQDTRFSYTKMDAAWN--FINKIWN-ASRFVIMNLPEDA 590 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F SD+ I + + E+ Sbjct: 591 KPAHMPDTSKFDLSDKWIFDRLNHTIGEV 619 Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L RF R++G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMEGYDTLYLPGMDHAGIATQAKVEAKLR 98 Query: 64 NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G + + FV Q + + LD S + F T +K + Sbjct: 99 KQGKDRHEMGREAFVKQVWDWKDEYANIIKSQWSKLGLSLDYSRERF--TLDKGLSKAVK 156 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ ++G IY+G Y W + A + + ++K G +Y+ ++ Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPTLETALSDIEVIHKDDKGAFYHVKY 204 >gi|168215545|ref|ZP_02641170.1| valyl-tRNA synthetase [Clostridium perfringens NCTC 8239] gi|182624398|ref|ZP_02952182.1| valyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] gi|177910401|gb|EDT72778.1| valyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] gi|182382320|gb|EDT79799.1| valyl-tRNA synthetase [Clostridium perfringens NCTC 8239] Length = 880 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 81/270 (30%), Positives = 130/270 (48%), Gaps = 26/270 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D D + F+P V G DI+ F W A ++ + + Sbjct: 450 VLDTWFSSALWPFSTLGWPDRTDDLEF-FYPTSTLVTGYDIIFF----WVARMIFSGIHN 504 Query: 285 ----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 P V HG I +G K+SKSLGN +DP+EVI+E G DALR+ LV A G D Sbjct: 505 MGETPF-DTVLIHGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDI 563 Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSR 396 Y + +RV A + AN I N SR V M L ++ ++ +D+ ILS + Sbjct: 564 RY----IPERVEAARNFANKIWN-ASRFVMMNLDRELMDKYKDCKEYSLADKWILSRMNS 618 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY-VTVE 453 +++E+ ENM+ + AL +V + D Y + KP + + ++A V++ V Sbjct: 619 LIKEVTENMEKYELGIALQKVHDFLWTEFCDYYIELVKP--VLYGDDEKAKGVVFNVLYT 676 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483 V+ LL +P + +I+ L E+ Sbjct: 677 VLNTGLKLLHPVMPFITEEIYTHLSTETES 706 >gi|160878630|ref|YP_001557598.1| valyl-tRNA synthetase [Clostridium phytofermentans ISDg] gi|160427296|gb|ABX40859.1| valyl-tRNA synthetase [Clostridium phytofermentans ISDg] Length = 892 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 71/238 (29%), Positives = 115/238 (48%), Gaps = 23/238 (9%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P D+ V G DI+ F I + + P K V HG + +G K+SKSLGN I Sbjct: 475 FYPTDVLVTGYDIIFFWVIRMIFSGYEQMNEKPF-KTVLFHGLVRDSQGRKMSKSLGNGI 533 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368 DP+E+IE+ G DALR+ L+ A G D FY +RV A + AN + N SR + M Sbjct: 534 DPLEIIEQYGADALRFMLITGNATGNDMRFY-----MERVEAARNFANKVWN-ASRFIMM 587 Query: 369 ILKDYD--GMIPTP-----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 ++ + GM T++D+ I+S + + +++ E+++ + A +V + Sbjct: 588 NMQQMEEAGMDAKVDSVDMSTLTDADKWIISKVNTLTKDVTEHLEKFDLGIAAQKVYDFI 647 Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 E D Y + KP L + + +Y V+ LL ++P + +IF L Sbjct: 648 WEEFCDWYIEMVKP-RLYGDDQATKTAAIYTLRTVLDSALKLLHPYMPFITEEIFCTL 704 Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56 ++ K + I PN Q H+GHA + + D+L RF R+ G + L+ GTD Sbjct: 33 DKTKKPFTIVIPPPNITGQLHMGHALDNTMQDILIRFKRMQGFNALWQPGTDHASIATEV 92 Query: 57 KIAKAAQNAGV 67 KI +A + G+ Sbjct: 93 KIIEALKKEGI 103 >gi|257462510|ref|ZP_05626922.1| leucyl-tRNA synthetase [Fusobacterium sp. D12] gi|317060166|ref|ZP_07924651.1| leucyl-tRNA synthetase [Fusobacterium sp. D12] gi|313685842|gb|EFS22677.1| leucyl-tRNA synthetase [Fusobacterium sp. D12] Length = 852 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + YP+ + H+GHA I DV+AR+ R+ G +VL G D G AA Sbjct: 32 KENYYVLEMLPYPSGKLHVGHARNYTIGDVIARYKRMKGYNVLHPMGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G + N N + +L SY D I + ++ + ++KK+ +KG +YK Sbjct: 92 QNGAHPATWTKSNIENMKRQLKLLGFSYDWDREIASYTPEYYKWNQWIFKKMYEKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + +++V DG+ + V E E +FF+++ Y D+LL +E Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGKCWRHSKTTVIQKELEQWFFKITDYADELLEGHE 208 Query: 182 ----SHPEFILPIER 192 PE +L +++ Sbjct: 209 ELRGGWPEKVLTMQK 223 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/195 (22%), Positives = 101/195 (51%), Gaps = 30/195 (15%) Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L K EK+SKS N +DP E+I + G D R F++ K+ ++++GL Sbjct: 605 LLVKVEKMSKSKNNGVDPEEMILKYGADTTRLFIMFAAPPEKELEWNENGLA-------- 656 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFT---ESDESILSVCSRVLQEIRENMQNQL-IH 411 G ++R ++L++ + +T +SD++++ ++ ++++ E+++N + Sbjct: 657 -GAYRFLTRVWRLVLENQTHISLEKIDYTTISKSDKALIIKLNQTIKKVTESIENDYHFN 715 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 ++A ++ L++E+ Y K++ + + VL E ++Q+ I+L FVP Sbjct: 716 TSIAAIMELLNEIQAY----------KSDSTQYTRVL---GEALKQIVIMLSPFVPHFCE 762 Query: 472 KIFDIL----FVADE 482 ++++ + +V+D+ Sbjct: 763 ELWESIGETGYVSDQ 777 >gi|317473020|ref|ZP_07932321.1| valyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] gi|316899503|gb|EFV21516.1| valyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] Length = 756 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 99/400 (24%), Positives = 167/400 (41%), Gaps = 79/400 (19%) Query: 137 NDDEVYKGADGQY-----YNAQHNPVQWMEEEGYFFRLSAYQ------DKLLSYYES--H 183 NDD G+Y Y A+ V+ +EE+GY ++ ++ D+ + E Sbjct: 299 NDDATINENGGRYEGMERYEARKAIVKDLEEQGYLVKIKEHEHNVGTHDRCKATIEPMVK 358 Query: 184 PEFILPI-ERRNEVISFVKSG-------------------LKDLSLSRKTFDWGIKIP-- 221 P++ + + E I VK+G ++D +SR+ + WG +IP Sbjct: 359 PQWFVKMDELAKPAIEAVKNGDIKFVPERYTKTYLHWLENIRDWCISRQLW-WGHRIPAY 417 Query: 222 ------------DDPQYI--------------MYVWIDALTNYLTTTGYLDNPDGSKAKF 255 + P+ + W + +T G+ + + F Sbjct: 418 YCDECGETVVAKEKPEVCPKCGCTHFTQDEDTLDTWFSSALWPFSTLGWPEQTE-ELDYF 476 Query: 256 WPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312 +P ++ V G DI+ F + + + + P V HG + KG K+SKSLGN ID Sbjct: 477 YPTNVLVTGYDIIFFWVVRMVFSGYEHTGKAPF-DTVLIHGLVRDDKGRKMSKSLGNGID 535 Query: 313 PIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMI 369 P+EVI + G DALR+ LV A G D FY +RV A + AN + N SR + M Sbjct: 536 PLEVISQYGADALRFTLVTGNAPGNDMRFY-----MERVEASRNFANKVWN-ASRFMMMN 589 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427 + D T +D ILS + + +++ +NM + A+ ++ + E D Y Sbjct: 590 FEQADFSHVELSDLTSADRWILSKFNTLAKDVTDNMDKYELGIAVQKLNDFIWEEFCDWY 649 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 + KP L + + L+ +V+ + LL F+P Sbjct: 650 IEMVKP-RLYNDEDNTKAAALWTLKKVLSESLKLLHPFMP 688 >gi|323147774|gb|ADX33166.1| MetG [Vibrio vulnificus] gi|323147780|gb|ADX33169.1| MetG [Vibrio vulnificus] gi|323147814|gb|ADX33186.1| MetG [Vibrio vulnificus] gi|323147816|gb|ADX33187.1| MetG [Vibrio vulnificus] gi|323147822|gb|ADX33190.1| MetG [Vibrio vulnificus] gi|323147828|gb|ADX33193.1| MetG [Vibrio vulnificus] gi|323147832|gb|ADX33195.1| MetG [Vibrio vulnificus] Length = 143 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 7/137 (5%) Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-- 259 L+ +SR +G +IP + YVW+DA Y+ + L + D ++W Sbjct: 1 LQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKHSK 60 Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316 H IGKDI+ FH+++WPA L + P VF HG++ G K+SKS G + Sbjct: 61 TELYHFIGKDIVYFHSLFWPAMLDGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTY 120 Query: 317 IEEVGVDALRYFLVREI 333 +E + + LRY+ ++ Sbjct: 121 LEHLDPECLRYYYAAKL 137 >gi|296328927|ref|ZP_06871435.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153916|gb|EFG94726.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 859 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + + YP+ + H+GHA I DV++R+ R+ G +VL G D G AA Sbjct: 32 KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G ++ N N R ++ SYD I + ++ + L+K++ +KG IYK Sbjct: 92 QNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + +++V DG + V E E +FF+++ Y D+LL +E Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208 Query: 182 ----SHPEFILPIER 192 PE +L +++ Sbjct: 209 EIKDGWPEKVLTMQK 223 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 91/180 (50%), Gaps = 15/180 (8%) Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K EK+SKS N +DP E++++ G D R F++ K+ ++++GL + Sbjct: 608 KVEKMSKSKNNGVDPEEILDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417 LV + ++ D + ++ D+++L ++ ++++ + ++N + A+A Sbjct: 666 WRLVFENSELVKNANDKI--DYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFNTAIAAN 723 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + L++EV Y + N ++A+ +L T ++++ I+L FVP ++I++ L Sbjct: 724 MELINEVQTYVSSS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 773 >gi|219850836|ref|YP_002465268.1| isoleucyl-tRNA synthetase [Methanosphaerula palustris E1-9c] gi|219545095|gb|ACL15545.1| isoleucyl-tRNA synthetase [Methanosphaerula palustris E1-9c] Length = 1060 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 55/297 (18%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 I VW D+ T + D + WPADL + G+D R F++ + Sbjct: 516 IFDVWFDSAVASWATLDFPAEHDQFD-RLWPADLIIEGQDQTRGWFYSQLGASTCAFDKA 574 Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K+V HGF L +K+SKSLGN+I P EV+ + GVD LR++++ A D ++ Sbjct: 575 PY-KRVLMHGFALDADSKKMSKSLGNMITPEEVVAKYGVDVLRFYVLSANAPWDDLKFNW 633 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDY---------DGMIPTP-------------- 380 DG+K V R+++++ Y DG +P Sbjct: 634 DGVKT-------------VHRTINVLWNVYRFPLTYMSLDGFVPESNEEIWNGEYITRRY 680 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKT 439 A D I+S + + + + M +HRA ++S + E + R++ + Sbjct: 681 AAMPSEDRWIISTVNSLAVTVTQAMNECTLHRATRAILSFILEDLSRWYVQLVRPRMWLE 740 Query: 440 NPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495 D+ Y T+ V+R+L +L+ F P +A C+Q+L Q+ P Sbjct: 741 GEDQGKQDAYETMYYVMRKLLVLIAPFAPHIAET------------CYQNLKQQGDP 785 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 15 YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTKVFV 73 Y H+G A+ II D L RFHR+ G +V+ G D HG I + + G +K + Sbjct: 49 YTTGHIHLGTAWNKIIKDSLLRFHRMTGRNVIARAGYDMHGLPIEVQVEKKLGFVSKKDI 108 Query: 74 DQ 75 +Q Sbjct: 109 EQ 110 >gi|170759549|ref|YP_001788482.1| valyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree] gi|169406538|gb|ACA54949.1| valine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree] Length = 881 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 26/270 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D K F+P + V G DI+ F W A ++ + L Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTPDLKY-FYPNNTLVTGYDIIFF----WVARMVFSGLYC 505 Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +P V HG + +G+K+SKSLGN +DPIEVI+E G DALR+ LV A G D Sbjct: 506 MDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDPIEVIDEYGADALRFTLVTGNAPGNDIR 565 Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRV 397 Y +RV A + AN I N SR V M L KD +T +D+ ILS + V Sbjct: 566 Y----YPERVEAARNFANKIWN-ASRFVLMNLDKDLMDKYKDNKNYTIADKWILSRLNTV 620 Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVE 453 ++E+ EN++ + A ++ + D Y + KP + + + A VL+ +E Sbjct: 621 VKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELVKPVLYGEDEQSKGIAFNVLHKVLE 680 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483 Q LL +P + +I+ L+ E+ Sbjct: 681 TSLQ---LLHPIMPFITEEIYTHLYTEYES 707 >gi|326942237|gb|AEA18133.1| valyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis CT-43] Length = 881 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 84/349 (24%), Positives = 151/349 (43%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W ++ +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSVLWPFSTLGWPNEDSADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+RYFL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T ++ D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|153940722|ref|YP_001392440.1| valyl-tRNA synthetase [Clostridium botulinum F str. Langeland] gi|152936618|gb|ABS42116.1| valine--tRNA ligase [Clostridium botulinum F str. Langeland] gi|295320426|gb|ADG00804.1| valine--tRNA ligase [Clostridium botulinum F str. 230613] Length = 881 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 26/270 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D K F+P + V G DI+ F W A ++ + L Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTPDLKY-FYPNNTLVTGYDIIFF----WVARMVFSGLYC 505 Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +P V HG + +G+K+SKSLGN +DPIEVI+E G DALR+ LV A G D Sbjct: 506 MDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDPIEVIDEYGADALRFTLVTGNAPGNDIR 565 Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRV 397 Y +RV A + AN I N SR V M L KD +T +D+ ILS + V Sbjct: 566 Y----YPERVEAARNFANKIWN-ASRFVLMNLDKDLMDKYKDNKNYTIADKWILSRLNTV 620 Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVE 453 ++E+ EN++ + A ++ + D Y + KP + + + A VL+ +E Sbjct: 621 VKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELVKPVLYGEDEQSKGIAFNVLHKVLE 680 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483 Q LL +P + +I+ L+ E+ Sbjct: 681 TSLQ---LLHPIMPFITEEIYTHLYTEYES 707 >gi|53804495|ref|YP_113910.1| leucyl-tRNA synthetase [Methylococcus capsulatus str. Bath] gi|60390675|sp|Q608N7|SYL_METCA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|53758256|gb|AAU92547.1| leucyl-tRNA synthetase [Methylococcus capsulatus str. Bath] Length = 887 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 12/186 (6%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK Y + YP+ + H+GH I DV+AR+ R+ G +VL G D G AA Sbjct: 32 REKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARYQRMRGKNVLQPMGWDAFGLPAENAAM 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 GVT + D N+ R L ++ +D I T + ++ + L+ ++ +KG IYK Sbjct: 92 QNGVTPAAWTDANADYMRKQLKSLGLAVDWDREIATCKPEYYRWEQWLFTRLFEKGLIYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 + D+ +++V G G + P+ YF R++AY ++LL+ Sbjct: 152 KTAPVNWDPVDQTVLANEQVIDGRGWRSGALVEKRDIPM-------YFMRITAYAEELLA 204 Query: 179 YYESHP 184 + P Sbjct: 205 ELDDLP 210 >gi|322807474|emb|CBZ05048.1| valyl-tRNA synthetase [Clostridium botulinum H04402 065] Length = 881 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 26/270 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D K F+P + V G DI+ F W A ++ + L Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTPDLKY-FYPNNTLVTGYDIIFF----WVARMVFSGLYC 505 Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +P V HG + +G+K+SKSLGN +DPIEVI+E G DALR+ LV A G D Sbjct: 506 MDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDPIEVIDEYGADALRFTLVTGNAPGNDIR 565 Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRV 397 Y +RV A + AN I N SR V M L KD +T +D+ ILS + V Sbjct: 566 Y----YPERVEAARNFANKIWN-ASRFVLMNLDKDLMDKYKDNKNYTIADKWILSRLNTV 620 Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVE 453 ++E+ EN++ + A ++ + D Y + KP + + + A VL+ +E Sbjct: 621 VKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELVKPVLYGEDEQSKGIAFNVLHKVLE 680 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483 Q LL +P + +I+ L+ E+ Sbjct: 681 TSLQ---LLHPIMPFITEEIYTHLYTEYES 707 >gi|226950593|ref|YP_002805684.1| valine--tRNA ligase [Clostridium botulinum A2 str. Kyoto] gi|226841749|gb|ACO84415.1| valine--tRNA ligase [Clostridium botulinum A2 str. Kyoto] Length = 881 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 26/270 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D K F+P + V G DI+ F W A ++ + L Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTPDLKY-FYPNNTLVTGYDIIFF----WVARMVFSGLYC 505 Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +P V HG + +G+K+SKSLGN +DPIEVI+E G DALR+ LV A G D Sbjct: 506 MDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDPIEVIDEYGADALRFTLVTGNAPGNDIR 565 Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRV 397 Y +RV A + AN I N SR V M L KD +T +D+ ILS + V Sbjct: 566 Y----YPERVEAARNFANKIWN-ASRFVLMNLNKDLMDKYKDNKNYTIADKWILSRLNTV 620 Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVE 453 ++E+ EN++ + A ++ + D Y + KP + + + A VL+ +E Sbjct: 621 VKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELVKPVLYGEDEQSKGIAFNVLHKVLE 680 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483 Q LL +P + +I+ L+ E+ Sbjct: 681 TSLQ---LLHPIMPFITEEIYTHLYTEYES 707 >gi|148381112|ref|YP_001255653.1| valyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|153934142|ref|YP_001385486.1| valyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|153935830|ref|YP_001388892.1| valyl-tRNA synthetase [Clostridium botulinum A str. Hall] gi|148290596|emb|CAL84725.1| valyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|152930186|gb|ABS35686.1| valyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|152931744|gb|ABS37243.1| valine--tRNA ligase [Clostridium botulinum A str. Hall] Length = 881 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 26/270 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D K F+P + V G DI+ F W A ++ + L Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTPDLKY-FYPNNTLVTGYDIIFF----WVARMVFSGLYC 505 Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +P V HG + +G+K+SKSLGN +DPIEVI+E G DALR+ LV A G D Sbjct: 506 MDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDPIEVIDEYGADALRFTLVTGNAPGNDIR 565 Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRV 397 Y +RV A + AN I N SR V M L KD +T +D+ ILS + V Sbjct: 566 Y----YPERVEAARNFANKIWN-ASRFVLMNLDKDLMDKYKDNKNYTIADKWILSRLNTV 620 Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVE 453 ++E+ EN++ + A ++ + D Y + KP + + + A VL+ +E Sbjct: 621 VKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELVKPVLYGEDEQSKGIAFNVLHKVLE 680 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483 Q LL +P + +I+ L+ E+ Sbjct: 681 TSLQ---LLHPIMPFITEEIYTHLYTEYES 707 >gi|170755423|ref|YP_001782798.1| valyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] gi|169120635|gb|ACA44471.1| valyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] Length = 881 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 26/270 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D K F+P + V G DI+ F W A ++ + L Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTPDLKY-FYPNNTLVTGYDIIFF----WVARMVFSGLYC 505 Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +P V HG + +G+K+SKSLGN +DPIEVI+E G DALR+ LV A G D Sbjct: 506 MDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDPIEVIDEYGADALRFTLVTGNAPGNDIR 565 Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRV 397 Y +RV A + AN I N SR V M L KD +T +D+ ILS + V Sbjct: 566 Y----YPERVEAARNFANKIWN-ASRFVLMNLDKDLMDKYKDNKNYTIADKWILSRLNTV 620 Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVE 453 ++E+ EN++ + A ++ + D Y + KP + + + A VL+ +E Sbjct: 621 VKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELVKPVLYGEDEQSKGIAFNVLHKVLE 680 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483 Q LL +P + +I+ L+ E+ Sbjct: 681 TSLQ---LLHPIMPFITEEIYTHLYTEYES 707 >gi|328948525|ref|YP_004365862.1| valyl-tRNA synthetase [Treponema succinifaciens DSM 2489] gi|328448849|gb|AEB14565.1| Valyl-tRNA synthetase [Treponema succinifaciens DSM 2489] Length = 912 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 92/394 (23%), Positives = 165/394 (41%), Gaps = 51/394 (12%) Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189 L++ Y +E K + G Y ++ ++ +F ++ DK L+ +++ EF+ Sbjct: 344 LKELGLYKGEEKIKHSVGHCYRCSTVVEPYLSDQ-WFVKMKPLADKALAAWKNE-EFVFY 401 Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------DDPQYIMYVWIDA-- 234 + + ++D +SR+ + WG +IP +DP DA Sbjct: 402 PRKWENTFTHWMENIRDWCISRQLW-WGHRIPVWYCECGETIVSREDPVKCPKCGADASH 460 Query: 235 -----------LTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLS 281 +++L L P+ + F+P V DI+ F W + ++ Sbjct: 461 LKQDPDVLDTWFSSWLWPFSTLGWPEKTSDLEHFYPTTAIVTAYDIIFF----WVSRMIM 516 Query: 282 ANLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 A L K ++ HG + K G K+SKSLGN IDP+E+I+ G DAL++ L A Sbjct: 517 AGLEFTGKSPFHDIYIHGLVRDKQGRKMSKSLGNGIDPLEIIDLYGADALKFTLSYMCAQ 576 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVC 394 G+D DKD K + + N + N SR + L+D +IP + E D+ I + Sbjct: 577 GQDVLVDKDSFK--MGSRFCNKVWN-ASRYILGNLEDRT-LIPVADSDLNELDKWIYTCL 632 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452 ++ R ++ + + + D Y +A K K + + V + Sbjct: 633 DNAVKNARAAFESYRYNDGASAIYEYFWNDFCDWYVEATK-LSFKNGDDHEKDRAVSVLL 691 Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD--ENR 484 V+ + LL ++P + +I+ L +A ENR Sbjct: 692 NVLEESLRLLHPYIPFVTEEIYSKLPLAQIVENR 725 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 25/165 (15%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----------Q 56 + I PN H+GH + D++ R+HR+ G D L+ GTD G + Sbjct: 56 TVVIPPPNVTGVLHMGHGLNNTLQDIVVRYHRMKGDDTLWIPGTDHAGIATQNVVEKQLK 115 Query: 57 KIAKAAQNAG------VTTKVFVDQNS---RNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 K K + G T KV D ++ + R + + +D + + F T ++ R Sbjct: 116 KEGKTRNDLGREKFLERTWKVKEDHHNTIVKQQRKLGNSVDWNRERF--TMDEGLSKAVR 173 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYN 151 ++ + ++G IYKG Y + R DDEV + DG Y+ Sbjct: 174 NVFVTLYERGLIYKGHYLVNWCPRCGTALADDEVEHTDTDGFMYH 218 >gi|168179187|ref|ZP_02613851.1| valyl-tRNA synthetase [Clostridium botulinum NCTC 2916] gi|182670164|gb|EDT82140.1| valyl-tRNA synthetase [Clostridium botulinum NCTC 2916] Length = 881 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 26/270 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D K F+P + V G DI+ F W A ++ + L Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTPDLKY-FYPNNTLVTGYDIIFF----WVARMVFSGLYC 505 Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +P V HG + +G+K+SKSLGN +DPIEVI+E G DALR+ LV A G D Sbjct: 506 MDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDPIEVIDEYGADALRFTLVTGNAPGNDIR 565 Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRV 397 Y +RV A + AN I N SR V M L KD +T +D+ ILS + V Sbjct: 566 Y----YPERVEAARNFANKIWN-ASRFVLMNLDKDLMDKYKDNKNYTIADKWILSRLNTV 620 Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVE 453 ++E+ EN++ + A ++ + D Y + KP + + + A VL+ +E Sbjct: 621 VKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELVKPVLYGEDEQSKGIAFNVLHKVLE 680 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483 Q LL +P + +I+ L+ E+ Sbjct: 681 TSLQ---LLHPIMPFITEEIYTHLYTEYES 707 >gi|307243608|ref|ZP_07525751.1| valine--tRNA ligase [Peptostreptococcus stomatis DSM 17678] gi|306492977|gb|EFM64987.1| valine--tRNA ligase [Peptostreptococcus stomatis DSM 17678] Length = 883 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 76/265 (28%), Positives = 120/265 (45%), Gaps = 24/265 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + T G+ D D ++P + V G DI+ F + SA + Sbjct: 450 VLDTWFSSGLWPFETMGWPDQTDMLDY-YYPTSVLVTGYDIIFFWVV---RMAFSAMFCM 505 Query: 287 PKKVFSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GF 340 +K F H I +G K+SKSLGN IDP+E+I++ G DALR+ L + G D F Sbjct: 506 NEKPFEHVLIHGLVRDSEGRKMSKSLGNGIDPLEIIDQYGADALRFTLTTGNSPGNDMRF 565 Query: 341 Y-DKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMI--PTPGAFTESDESILSVC 394 Y ++ + N L N SR V M L+D D + T +D+ I+S Sbjct: 566 YMERVEFARNFNNKLWNA-----SRFVFMNLEDESLLDNLTRESVEANLTLADKWIISRA 620 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTV 452 +R+++E+ NM + AL + SE D Y + KP L + + LY Sbjct: 621 NRLVKEVNYNMDQFDLGIALQKAYDFTWSEYCDWYIEIVKP-RLYGDDREAKRAALYTLT 679 Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477 V+ ++ LL F+P + +I+ L Sbjct: 680 YVLEKILKLLHPFIPFITEEIYSYL 704 Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 ++ K S + PN Q H+GHA + + D+L R+ R+DG + L+ GTD Sbjct: 33 DKTKKSFSIVMPPPNITGQLHMGHALDDTLQDILTRWKRMDGYEALWIPGTD 84 >gi|34763278|ref|ZP_00144237.1| Leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887049|gb|EAA24161.1| Leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 862 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + + YP+ + H+GHA I DV++R+ R+ G +VL G D G AA Sbjct: 35 KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 94 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G ++ N N R ++ SYD I + ++ + L+K++ +KG IYK Sbjct: 95 QNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 154 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + +++V DG + V E E +FF+++ Y D+LL +E Sbjct: 155 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYVDELLEGHE 211 Query: 182 ----SHPEFILPIER 192 PE +L +++ Sbjct: 212 EIKDGWPEKVLTMQK 226 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 91/180 (50%), Gaps = 15/180 (8%) Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K EK+SKS N +DP E++++ G D R F++ K+ ++++GL + Sbjct: 611 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 668 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417 LV + ++ D + ++ D+++L ++ ++++ + ++N + A+A Sbjct: 669 WRLVFENSELVKNANDEI--DYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAAN 726 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + L++EV Y + N ++A+ +L T ++++ I+L FVP ++I++ L Sbjct: 727 MELINEVQTYVASS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 776 >gi|78044410|ref|YP_359197.1| valyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] gi|90103530|sp|Q3AF87|SYV_CARHZ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|77996525|gb|ABB15424.1| valyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] Length = 878 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 80/272 (29%), Positives = 125/272 (45%), Gaps = 29/272 (10%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 K+ DP ++ W + +T G+ N + K ++P + V G+DI+ F W A Sbjct: 441 KVHQDPD-VLDTWFSSALWPFSTLGWPQNTEELKY-YYPTSVLVTGRDIIFF----WVAR 494 Query: 279 LLSANLP----LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 +L L +P K+V HG +L +G K+SKSLGN +DP+EVI G D+LR+ LV Sbjct: 495 MLFMGLEFMKEVPFKEVLIHGLVLDAQGRKMSKSLGNGVDPVEVIASHGADSLRFMLVTG 554 Query: 333 IACGKD---GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 G D F DG + + AN + N SR V M L+ + T +D Sbjct: 555 NTPGNDLRFHFERLDGAR-----NFANKLWN-ASRFVLMNLEGFTPQGIKQEELTLADRW 608 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP--DRAS 445 IL+ + V+ + + + A ++ + + D Y + KP L P D A Sbjct: 609 ILARLNAVIDRVTAFLDEYELGEAARELYEFIWDEFCDWYVELTKP-RLYGKMPGGDTAR 667 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 VLY V++ LL F+P + +I+ L Sbjct: 668 EVLYA---VLKTTLELLHPFMPFITEEIWQRL 696 Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 11/76 (14%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ERE I Q H+GHA + + D+LAR+ R+ G + L+ GTD Sbjct: 34 EREPFCIVMPPPNVTGQLHMGHALDNTMQDILARYKRMQGFNTLWLPGTD---------- 83 Query: 63 QNAGVTTKVFVDQNSR 78 +AG+ T+ V++ R Sbjct: 84 -HAGIATQAKVEEELR 98 >gi|237742619|ref|ZP_04573100.1| leucyl-tRNA synthetase [Fusobacterium sp. 4_1_13] gi|229430267|gb|EEO40479.1| leucyl-tRNA synthetase [Fusobacterium sp. 4_1_13] Length = 859 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + + YP+ + H+GHA I DV++R+ R+ G +VL G D G AA Sbjct: 32 KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G ++ N N R ++ SYD I + ++ + L+K++ +KG IYK Sbjct: 92 QNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + +++V DG + V E E +FF+++ Y D+LL +E Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYVDELLEGHE 208 Query: 182 ----SHPEFILPIER 192 PE +L +++ Sbjct: 209 EIKDGWPEKVLTMQK 223 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 91/180 (50%), Gaps = 15/180 (8%) Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K EK+SKS N +DP E++++ G D R F++ K+ ++++GL + Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417 LV + ++ D + ++ D+++L ++ ++++ + ++N + A+A Sbjct: 666 WRLVFENSELVKNANDEI--DYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAAN 723 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + L++EV Y + N ++A+ +L T ++++ I+L FVP ++I++ L Sbjct: 724 MELINEVQTYVASS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 773 >gi|229098932|ref|ZP_04229867.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-29] gi|229117961|ref|ZP_04247321.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228665410|gb|EEL20892.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228684430|gb|EEL38373.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-29] Length = 867 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 86/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + KF+ D Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEEAVDFKKFYSTD 467 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+RYFL A G+D + + ++ N N I N SR V M + D Sbjct: 524 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686 Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T ++ D Sbjct: 87 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 146 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194 >gi|257066730|ref|YP_003152986.1| valyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] gi|256798610|gb|ACV29265.1| valyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] Length = 879 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 85/359 (23%), Positives = 161/359 (44%), Gaps = 53/359 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ + + Y+ ++P ++++ + ++D ++SR+ + WG ++P Sbjct: 357 WFVKMDEFAKMCIDAYDKGEVKLIPDSLSKTYMNWL-NNIRDWTISRQLW-WGHRLPVFY 414 Query: 222 -DDPQYIMY-----------------------VWIDALTNYLTTTGYLDNPDGSKA--KF 255 DD + I+ W + T G+ PD ++ F Sbjct: 415 TDDGEIIVSEDEPDENGMLNGVHVTQDEDTLDTWFSSALWPFATLGW---PDENEELDYF 471 Query: 256 WPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313 +P D+ V G DI+ F I + + + +P +F+ +G K+SKSLGN +DP Sbjct: 472 FPTDILVTGYDIIFFWVIRMIFSSIYNTGKVPFHHVLFTGLIRDPQGRKMSKSLGNGVDP 531 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILK 371 I+V+ E G DALR+ L+ + G D YD +KR+ A + AN + N SR V M ++ Sbjct: 532 IDVVNEYGADALRFTLITGNSPGNDMRYD----EKRILASRNFANKLWN-ASRFVLMNIE 586 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFD 429 + D + D+ IL + V+ ++ +N+ I A ++ + D Y + Sbjct: 587 EGDDLDFKGENLELEDKWILKRLNDVIVDVSKNLDKYEIGLAADRIEDFIWNEYCDWYIE 646 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF-------DILFVAD 481 K L + + + V V + V++ + +LL F+P + +I+ D+L V D Sbjct: 647 FAKI-RLYGDDKEAKANVKKVLLYVLKNMLVLLHPFMPFITEEIYSSLPNKKDLLIVED 704 Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 22/142 (15%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-------- 68 H+GHA I D++ R+ R+ G + L+ GTD K+ + G T Sbjct: 49 HLGHALNNTIQDIIIRYKRMAGFEALWIPGTDHASISTESKVVDKIYSEGKTKADLGREG 108 Query: 69 --------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 T + + R + D +D F T ++ + ++KK+ D G IY Sbjct: 109 FLEEAWDWTNKYGGRIKEQLRTIGVSCDWDHDSF--TMDENLTKAVKRVFKKMYDDGLIY 166 Query: 121 KGCYSGWYSLRDEAYYNDDEVY 142 +G + + E +D EVY Sbjct: 167 RGNRIVNWDPKAETAISDAEVY 188 >gi|170077832|ref|YP_001734470.1| valyl-tRNA synthetase [Synechococcus sp. PCC 7002] gi|169885501|gb|ACA99214.1| valyl-tRNA synthetase [Synechococcus sp. PCC 7002] Length = 912 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 28/283 (9%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 ++ DP ++ W + +T G+ DN + + K++P + V G DI+ F W A Sbjct: 459 QLEQDPD-VLDTWFSSGLWPFSTLGWPDNSEDFQ-KYFPNSVLVTGFDIIFF----WVAR 512 Query: 279 L------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 + + +P K V+ HG + G+K+SKS N IDP+ + + G DALRY L+R Sbjct: 513 MTMMSSHFTGKIPF-KDVYIHGLVRDENGKKMSKSANNGIDPLLMCDRYGTDALRYTLIR 571 Query: 332 EIA-CGKDGF--YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGA-- 382 E+A G+D YD+ + + + + + N + + ++ + DG PT P Sbjct: 572 EVAGAGQDISLQYDRKTDESQ-SVEASRNFANKLWNAARFVMMNLDGKTPTDLGRPAMAD 630 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTN 440 D ILS +V+ + +N++ + A + + D Y + KP K Sbjct: 631 LELGDRWILSRLHQVIADTHKNLEGYGLGEAAKALYEFIWGDFCDWYIELVKPRLYAKEA 690 Query: 441 PDRASTVL--YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 D+AS + + V+ + LL F+P + +I+ L AD Sbjct: 691 QDQASRTVAQQILAWVLEDILKLLHPFMPHITEEIWQTLTQAD 733 >gi|46200127|ref|YP_005794.1| leucyl-tRNA synthetase [Thermus thermophilus HB27] gi|31615792|pdb|1OBH|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed With A Pre-Transfer Editing Substrate Analogue In Both Synthetic Active Site And Editing Site gi|313507210|pdb|2BTE|A Chain A, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With With A Trnaleu Transcript In The Post-Editing Conformation And A Post-Transfer Editing Substrate Analogue gi|313507211|pdb|2BTE|D Chain D, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With With A Trnaleu Transcript In The Post-Editing Conformation And A Post-Transfer Editing Substrate Analogue gi|313507217|pdb|2BYT|A Chain A, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With A Trnaleu Transcript In The Post-Editing Conformation gi|313507218|pdb|2BYT|D Chain D, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With A Trnaleu Transcript In The Post-Editing Conformation gi|46197755|gb|AAS82167.1| leucyl-tRNA synthetase [Thermus thermophilus HB27] Length = 878 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 7/193 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K Y+ YP+ H+GH + DVLARF R+ G +VL G D G AA Sbjct: 32 RGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAAL 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 GV K + N R ++ ++ I Y D + T E ++ + ++ K+ +KG Y+ Sbjct: 92 KFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYR 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + + +++V +G+ + + PV+ E E ++ R++AY ++LL E Sbjct: 152 AKGLVNWCPKCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLE 208 Query: 182 --SHPEFILPIER 192 + PE + ++R Sbjct: 209 GLNWPEKVKAMQR 221 >gi|157878078|pdb|1H3N|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed With A Sulphamoyl Analogue Of Leucyl-Adenylate Length = 820 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 7/193 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K Y+ YP+ H+GH + DVLARF R+ G +VL G D G AA Sbjct: 32 RGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAAL 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 GV K + N R ++ ++ I Y D + T E ++ + ++ K+ +KG Y+ Sbjct: 92 KFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYR 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + + +++V +G+ + + PV+ E E ++ R++AY ++LL E Sbjct: 152 AKGLVNWCPKCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLE 208 Query: 182 --SHPEFILPIER 192 + PE + ++R Sbjct: 209 GLNWPEKVKAMQR 221 >gi|295695330|ref|YP_003588568.1| valyl-tRNA synthetase [Bacillus tusciae DSM 2912] gi|295410932|gb|ADG05424.1| valyl-tRNA synthetase [Bacillus tusciae DSM 2912] Length = 890 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 92/386 (23%), Positives = 159/386 (41%), Gaps = 50/386 (12%) Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 +LR E Y E ++ A G H V+ E +F ++ + + ++ + Sbjct: 335 ALRREGYLERVEPHRHAVGHCQRC-HTVVEPFLSEQWFVKMKPLAEPAIEAVKAGRVRFV 393 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY-------- 226 P ER ++ ++D +SR+ + WG +IP +DP++ Sbjct: 394 P-ERFEKLYLHWVDNVRDWCISRQLW-WGHRIPAWYCEGCGETIVAAEDPEHCPRCGSRQ 451 Query: 227 ------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280 ++ W + +T G+ + + + +++P D+ V G DI+ F W A ++ Sbjct: 452 LRQEEDVLDTWFSSALWPFSTMGWPEETEDLR-RYFPTDVLVTGFDIIYF----WVARMI 506 Query: 281 SANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 +L +V H +H +G K+SKSLGN IDP++V+ + G DALR+ L A Sbjct: 507 FMSLAFTGEVPFHTVYIHGLVRDSQGRKMSKSLGNGIDPLDVVNKYGADALRFMLASGTA 566 Query: 335 CGKDG-FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 G D FY + R AN I N + + K+ G + + IL Sbjct: 567 PGNDQRFYWEKVESAR---HFANKIWNAARFVLLNVDKEVGGDLKG-AVLGRPEHWILHR 622 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVT 451 + ++++ E ++N A V D Y + K L NP A V Sbjct: 623 LNETVRDVTEALENFDFGGAAKVAYDFVWGEFCDWYIEFSKA-ALYGENPLAARGTRQVL 681 Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477 V V+ + LL F+P L +I+ L Sbjct: 682 VHVLDRALRLLHPFMPFLTEEIWQKL 707 Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 H+GHA + + D+L RF R+ G D L+ GTD G Sbjct: 61 HMGHALDFTLQDILIRFRRMQGRDALWLPGTDHAG 95 >gi|291521943|emb|CBK80236.1| valyl-tRNA synthetase [Coprococcus catus GD/7] Length = 883 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 67/232 (28%), Positives = 115/232 (49%), Gaps = 19/232 (8%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P D+ V G DI+ F I + + + P V HG + +G K+SKSLGN I Sbjct: 475 FYPTDVLVTGYDIIFFWVIRMVFSGYEQTGKAPF-HTVLIHGLVRDSQGRKMSKSLGNGI 533 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 DP+EVI++ G DALR L+ A G D + + ++ N AN + N SR + M + Sbjct: 534 DPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVESSRN--FANKVWN-ASRFMLMNFE 590 Query: 372 -------DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423 DG+ + T++D+ ILS +R+ +++ EN+ + A++++ + E Sbjct: 591 QAAEKGISIDGV--SLADLTQADKWILSKMNRLTKDVTENIDKYELGIAVSKIYDFIWEE 648 Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 D Y + KP + +A+ + + +I L LL ++P + +IF Sbjct: 649 FCDWYIEMVKPRLYNDEDKTKAAALWTLKTVLINALK-LLHPYMPFITEEIF 699 >gi|157884158|pdb|2V0G|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed With A Trna(Leu) Transcript With 5-Fluoro-1,3-Dihydro-1- Hydroxy-2,1-Benzoxaborole (An2690) Forming An Adduct To The Ribose Of Adenosine-76 In The Enzyme Editing Site. gi|157884159|pdb|2V0G|D Chain D, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed With A Trna(Leu) Transcript With 5-Fluoro-1,3-Dihydro-1- Hydroxy-2,1-Benzoxaborole (An2690) Forming An Adduct To The Ribose Of Adenosine-76 In The Enzyme Editing Site Length = 877 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 7/193 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K Y+ YP+ H+GH + DVLARF R+ G +VL G D G AA Sbjct: 32 RGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAAL 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 GV K + N R ++ ++ I Y D + T E ++ + ++ K+ +KG Y+ Sbjct: 92 KFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYR 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + + +++V +G+ + + PV+ E E ++ R++AY ++LL E Sbjct: 152 AKGLVNWCPKCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLE 208 Query: 182 --SHPEFILPIER 192 + PE + ++R Sbjct: 209 GLNWPEKVKAMQR 221 >gi|295098865|emb|CBK87954.1| valyl-tRNA synthetase [Eubacterium cylindroides T2-87] Length = 757 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 81/306 (26%), Positives = 132/306 (43%), Gaps = 48/306 (15%) Query: 203 GLKDLSLSRKTFDWGIKIP--------------DDP---------QYIMYVWIDALTNYL 239 ++D +SR+ + WG +IP +DP + ++ W + Sbjct: 399 NIEDWCISRQLW-WGHRIPAWTNKETGEMYIGMEDPKDKENWIQDEDVLDTWFSSALWPF 457 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSH 293 +T G+ ++ D A+++P D+ V G DI+ F W A + N P K V H Sbjct: 458 STLGWPESTD-DLARYFPNDVLVTGYDIIFF----WVARMAFQTRYCMKNRPF-KDVLIH 511 Query: 294 GFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 G + +G K+SKSLGN IDP++VIE G DALR+FL G D +D+ ++ N Sbjct: 512 GLVRDSQGRKMSKSLGNGIDPMDVIENHGADALRFFLTTNSTPGLDLRFDEKKMESSWN- 570 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 N I N +R V M + D + + D+ ILS VL + NM+ Sbjct: 571 -FINKIWN-AARYVQMQIGDTKPTLDV-DCLSSVDKWILSRMDEVLNHVSMNMEKYEFAM 627 Query: 413 ALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468 ++ S + Y + K + + VLY +E I + +L F+P Sbjct: 628 IGNELYSFIWNDFCSWYIELSKATLYSEDQAVVQNTKAVLYTVLEAILK---MLSPFMPF 684 Query: 469 LANKIF 474 + +I+ Sbjct: 685 VTEEIY 690 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 18/108 (16%) Query: 12 AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69 I PN + H+GHA++ + D+L R+ RL G DVL+ +G D +AG+ T Sbjct: 41 VIPPPNVTGKLHLGHAWDTTLQDILCRYKRLKGYDVLWVSGMD-----------HAGIAT 89 Query: 70 KVFVDQNSRNFRDMADVLDISYDDFI-RTTE--KRHHDTCRILWKKIS 114 + VD+ +N + DI + F+ R E + + T R W K+ Sbjct: 90 QAKVDERLKN--EGISRYDIGREKFLDRAWEWKEEYASTIRSQWAKLG 135 >gi|171849151|pdb|2V0C|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed With A Sulphamoyl Analogue Of Leucyl-Adenylate In The Synthetic Site And An Adduct Of Amp With 5-Fluoro-1,3- Dihydro-1-Hydroxy-2,1-Benzoxaborole (An2690) In The Editing Site Length = 878 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 7/193 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K Y+ YP+ H+GH + DVLARF R+ G +VL G D G AA Sbjct: 32 RGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAAL 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 GV K + N R ++ ++ I Y D + T E ++ + ++ K+ +KG Y+ Sbjct: 92 KFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYR 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + + +++V +G+ + + PV+ E E ++ R++AY ++LL E Sbjct: 152 AKGLVNWCPKCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLE 208 Query: 182 --SHPEFILPIER 192 + PE + ++R Sbjct: 209 GLNWPEKVKAMQR 221 >gi|229105097|ref|ZP_04235748.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228678278|gb|EEL32504.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-28] Length = 867 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 86/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + KF+ D Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEEAIDFKKFYSTD 467 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+RYFL A G+D + + ++ N N I N SR V M + D Sbjct: 524 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686 Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T ++ D Sbjct: 87 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 146 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194 >gi|283769125|ref|ZP_06342030.1| valine--tRNA ligase [Bulleidia extructa W1219] gi|283104311|gb|EFC05689.1| valine--tRNA ligase [Bulleidia extructa W1219] Length = 871 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 35/301 (11%) Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQYI---------MYVWIDALTNY 238 ++D +SR+ + WG +IP + PQ I + W + Sbjct: 398 ENIEDWCISRQLW-WGHRIPAWYHKDTKEIYVGQEAPQDIENWRQDEDVLDTWFSSALWP 456 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFI 296 +T G+ + K +++P + G DI+ F + + A + P K V HG I Sbjct: 457 FSTLGWPKETEDFK-RYYPNSMMGTGYDIIFFWVARMAFQARHFTGQAPF-KDVVLHGLI 514 Query: 297 LH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 KG K+SKSLGN IDP+EVI++ GVDALRYFL G+D Y + ++ N Sbjct: 515 RDAKGRKMSKSLGNGIDPMEVIDQYGVDALRYFLTTNSTPGQDLRYIPEKVEAAWN--FI 572 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 N I N SR V M L+D + D IL+ ++ ++++ NM A + Sbjct: 573 NKIWN-ASRFVLMNLEDTTDFRLENKSLNSIDRWILTKLNKTIEQVTLNMDKYEFGLAGS 631 Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ V + Y + K L+ + + + V++ + LL ++P + +I Sbjct: 632 ELYGFVWDDFCSWYLELAKS-NLRSEHHEIQAATKATLAYVLKAVVCLLHPYMPFVTEEI 690 Query: 474 F 474 + Sbjct: 691 Y 691 Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 18/117 (15%) Query: 3 EREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 ++ K + I PN HIGHA++ I D++AR+ R+ G DVL+ G D Sbjct: 32 DKHKEPFTIVIPPPNVTGILHIGHAFDTTIQDMIARYKRMQGYDVLYLPGMD-------- 83 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHHDTCRILWKKIS 114 +AG+ T+ V+ +R + + D+ + F+ ++ + T R W K+ Sbjct: 84 ---HAGIATQAKVE--ARLKKQGLNRYDLGREKFLERAWAWKEEYAATIRSQWAKLG 135 >gi|296421294|ref|XP_002840200.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636414|emb|CAZ84391.1| unnamed protein product [Tuber melanosporum] Length = 817 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 28/299 (9%) Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAK 254 S++K+GLK ++R WG +P P Y +MYVW DA Y++ T N K Sbjct: 429 SWLKTGLKPRCITRD-LTWGTPVPV-PGYEDKVMYVWFDACIGYVSITA---NYTKEWEK 483 Query: 255 FWPADLHV-----IGKDILRFHAIYWPAFLLS---ANLPLPKKVFSHGFILHKGEKISKS 306 +W V +GKD + FH + +P + N + + + ++ ++G K SKS Sbjct: 484 WWKNKDEVKLYQFMGKDNVPFHTVVFPGSEIGTREGNWTMLHHISTTEYLQYEGGKFSKS 543 Query: 307 LG-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 G V V RY+L+ D + + N++L +GN V+R Sbjct: 544 RGVGVFGNNARDTGVPPSVWRYYLLSSRPETGDTQFVWQDFATKNNSELLANLGNFVNRL 603 Query: 366 VSMILKDYDGMIP--TPG----AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 + I Y G++P T G +F + ES+ + +L+ E ++N I L + ++ Sbjct: 604 IKFINAKYAGVVPDYTIGINDISFGQYKESV----NALLKSYIEELENVHIRAGLERAMA 659 Query: 420 LVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + E +R+ K TN P +A+ V+ + +I L+ L+ ++P + I L Sbjct: 660 ISGEGNRFLQDNKLDNALFTNSPKKAAAVVGFGINLIYLLSALIYPYMPATSESIVKQL 718 Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust. Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I+ A+ Y N PH+G+ ++ AD +R+ + + L+ GTDE+G A Sbjct: 236 VLITAALPYVNNVPHLGNIVGSVLSADAFSRYAKARNYNTLYICGTDEYGTATETKALEE 295 Query: 66 GVTTKVFVDQ 75 G+T + D+ Sbjct: 296 GITPRALCDK 305 >gi|302510571|ref|XP_003017237.1| hypothetical protein ARB_04114 [Arthroderma benhamiae CBS 112371] gi|291180808|gb|EFE36592.1| hypothetical protein ARB_04114 [Arthroderma benhamiae CBS 112371] Length = 975 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 39/280 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y+ YP+ H+GH I+DVLARF ++ G DVL G D G AA Sbjct: 75 KEKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKQMKGYDVLHPMGWDAFGLPAENAAI 134 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+ + + QN N R+ L I + D + T + + L+ + +KG Y+ Sbjct: 135 ERGIHPEGWTKQNIANMRNQLKDLGIRFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLAYQ 194 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177 Y D+ +++V A+ V+ E + +FFR++A+++ LL Sbjct: 195 AEAVVNYDPVDKTVLANEQVDSNGCSWRSGAK---VEKRELKQWFFRITAFKEALLKDLD 251 Query: 178 SYYESHPEFILPIER------RNEVISFVKSGLKDLSLSRKTFDWGI--KIPDDPQYIMY 229 S S P+ IL ++R R ++ F LS+ +T D + PD + Y Sbjct: 252 SLSGSWPDRILTMQRHWLGKSRGALVPFT------LSIPGETLDIEVFTTRPDTLHGVQY 305 Query: 230 VWID--------------ALTNYLTTTGYLDNPDGSKAKF 255 + + L ++ +TG L P +KA F Sbjct: 306 IALSTSHPVVKKMAANTPGLQEFINSTGSL--PPETKAGF 343 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 15/190 (7%) Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD---GLKK------RVN 351 EK+SKS N +DP IE G DA R ++ + +D+ G+++ + Sbjct: 673 EKMSKSKYNGVDPNTCIESYGADATRAHVLFSAPVSEVLEWDETKIVGIQRWFSRIWKAV 732 Query: 352 ADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410 D N + S L + M +P G +E++ ++L + + + ++ Sbjct: 733 EDTGNSLKRANFSSAPDALSSLNDMALPPLGKLSETESNLLLMTDNTISSVSYCLEKN-- 790 Query: 411 HRALAQVIS-LVSEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEV-IRQLAILLQAFVP 467 L VIS L+ + P E KT+P S T L+ T+ + + L +L P Sbjct: 791 QYGLNTVISDLIKLTNAIAAVPLPEESSKTSPSAQSVTPLHTTLYIALNSLLRMLAPIAP 850 Query: 468 KLANKIFDIL 477 A++ +++L Sbjct: 851 AFASECWEVL 860 >gi|269866172|ref|XP_002652181.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348] gi|220063007|gb|EED41875.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348] Length = 320 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 40/267 (14%) Query: 5 EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +K+++++A+ Y N QPH+G+ ++ ADV +RF R G DV++ +GTDE+G I A+ Sbjct: 10 KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD----- 118 T + V +N +++ D ++ +D F T +HH+ + ++ K D D Sbjct: 70 KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIFLKTIDHFDEKEIN 129 Query: 119 ---------------IYKGCYSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPVQ 158 I C G + D+ Y+ D + + + + + P Q Sbjct: 130 QMFCPKCKQFLADRYIEGECACGATTHGDQCDTCGRYHEDSQ--ELTNFRCSICKTTP-Q 186 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWG 217 + FF L ++L Y+++ R +++K L ++RK WG Sbjct: 187 IKTTKQLFFNL----NELQHYFQTMDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWG 242 Query: 218 IKIP----DDPQYIMYVWIDALTNYLT 240 + +P DD + YVW DA YL+ Sbjct: 243 VPVPLKEYDDK--VFYVWYDAPIGYLS 267 >gi|146293957|ref|YP_001184381.1| leucyl-tRNA synthetase [Shewanella putrefaciens CN-32] gi|166231643|sp|A4Y9E9|SYL_SHEPC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|145565647|gb|ABP76582.1| leucyl-tRNA synthetase [Shewanella putrefaciens CN-32] Length = 859 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 17/240 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+ARF RL G +VL G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 N + +N ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 92 NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 S + DE +++V DG + PV+ E +F +++AY ++LL+ Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 + PE + ++R R+E + ++ KTFD PD + YV I A Sbjct: 208 TLDGWPEQVKTMQRNWIGRSEGVEMTFG----VAGHDKTFDIYTTRPDTLMGVTYVAIAA 263 >gi|253582717|ref|ZP_04859938.1| leucine-tRNA ligase [Fusobacterium varium ATCC 27725] gi|251835587|gb|EES64127.1| leucine-tRNA ligase [Fusobacterium varium ATCC 27725] Length = 869 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 11/196 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + YP+ + H+GHA I DV++R+ R+ G +VL G D G AA Sbjct: 32 KENYYVLEMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLHPMGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120 G V+ N N + +L SYD I + ++ + ++K++ +KG IY Sbjct: 92 QNGAHPAVWTKSNIENMKRQLKMLGFSYDWEREIASYTPEYYRWNQWIFKRLYEKGLIYK 151 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K W + N+ + DG+ + V E E +FF+++ Y D+LL + Sbjct: 152 KKSLVNWCPECNTVLANE----QVEDGKCWRHSKTSVIQKELEQWFFKITDYADELLEGH 207 Query: 181 ----ESHPEFILPIER 192 + PE +L +++ Sbjct: 208 KEIKDGWPEKVLTMQK 223 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/188 (20%), Positives = 90/188 (47%), Gaps = 27/188 (14%) Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 ++ K EK+SKS N +DP E++E+ G D R F++ K+ ++++GL Sbjct: 615 LVSKIEKMSKSKNNGVDPEEMVEKYGADTTRLFIMFAAPPEKELEWNENGLA-------- 666 Query: 356 NGIGNLVSRSVSMILKDYDGM---IPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411 G +++ M+++ + M A + D++++ ++ ++++ E+++N + Sbjct: 667 -GAYRFLTKIWRMVMEHKENMEFGEINLNAVSREDKALIIKLNQTIKKVTESIENDYHFN 725 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY----VTVEVIRQLAILLQAFVP 467 ++A + L++E + KTN A V + EV+R + ++L F P Sbjct: 726 TSIAATMELINETQDF----------KTNVIEAGNVTSESKKIFGEVVRNIILMLSPFTP 775 Query: 468 KLANKIFD 475 + +++ Sbjct: 776 HFCDDLWE 783 >gi|212224954|ref|YP_002308190.1| isoleucyl-tRNA synthetase [Thermococcus onnurineus NA1] gi|212009911|gb|ACJ17293.1| isoleucyl-tRNA synthetase [Thermococcus onnurineus NA1] Length = 1065 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 84/336 (25%), Positives = 160/336 (47%), Gaps = 21/336 (6%) Query: 159 WMEEEGYFFRLSAYQD--KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD- 215 W E+G + + ++++ KL E + E I E +E + ++ L L R D Sbjct: 474 WQSEDGEIYVVGSFEELVKLSVAIEVNGERIDLPEDYSEKLRVIEEKLGPEDLHRPYVDA 533 Query: 216 WGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD-ILRF 270 + IK+ ++ VW D+ + Y N + K + WPAD V G+D + ++ Sbjct: 534 FIIKVNGKEMRRVKDVVDVWFDSGIASWASLDYPRNEELFK-ELWPADFIVEGEDQVTKW 592 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 A +++ + +KV HG++L KG+K+SKSLGN+I P EV+++ G D R+++ Sbjct: 593 FYSQQAASVIAFDTVPYRKVAMHGYVLDEKGDKMSKSLGNIIRPEEVVQKEGRDPFRFYM 652 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGA--FTES 386 + ++ + GL + + N + N+ S + M L ++D P F E Sbjct: 653 LWATNPWENLKFSWKGLAQ--VKRMLNILWNVYVLSATYMSLDNFDPTRVNPEELPFREE 710 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYF---DAQKPWELKKTNPD 442 D ILS + ++ E+ E ++ + +A + + V E + R++ ++ W ++ +PD Sbjct: 711 DRWILSRVNSLIGEVTEGIETFRLTKATRAIYNFVVEDLSRWYIRLIRKRMW-VEGDDPD 769 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 + + Y +V L L+ F P +A +I+ L Sbjct: 770 KLAA-YYTVWKVFNVLLRLMAPFTPYIAEEIYQNLL 804 Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 24/138 (17%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQN 64 K Y Y + H+G A+ II D++ RF + G +V G D HG I K Q Sbjct: 41 KYYFLDGPPYVSGAIHLGTAWNKIIKDMVIRFRTMQGYNVRRQPGFDMHGLPIEVKVEQA 100 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL---------WKKISD 115 G+ TK ++ +I D+FIR ++ + +++ W + Sbjct: 101 LGLKTKKDIET------------EIGVDEFIRKCKEFALNNLKVMTEQFKMLGIWMDWDN 148 Query: 116 KGDIYKGCY--SGWYSLR 131 K Y SGW++L+ Sbjct: 149 PYMTIKNEYIESGWFTLK 166 >gi|310826172|ref|YP_003958529.1| isoleucyl-tRNA synthetase [Eubacterium limosum KIST612] gi|308737906|gb|ADO35566.1| isoleucyl-tRNA synthetase [Eubacterium limosum KIST612] Length = 1039 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 67/238 (28%), Positives = 122/238 (51%), Gaps = 18/238 (7%) Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312 +PAD G D R F+++ + ++ P KKV + IL +G+K+SKS GN +D Sbjct: 548 YPADFICEGIDQTRGWFYSLLAISSFVTGKSPY-KKVLVNDLILDAEGQKMSKSRGNTVD 606 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 P E+ ++ G DALR++L+ +D +GLK+ V + N + N + + + + Sbjct: 607 PFELFDQYGADALRWYLLYVSPAWTPTRFDVEGLKE-VQSKFFNTLKN--TYNFFTLYAN 663 Query: 373 YDGMIPTP-----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDR 426 DG+ P E D ILS +R++QE+R M+ + +A+ ++ + V+E + Sbjct: 664 TDGIDPRTFFVDYHKRPEIDRWILSKYNRLVQEVRGEMEIYDLTKAVRKIQNFVNEDLSN 723 Query: 427 YF---DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 ++ + ++ W + T +A V T EV+ LA L+ F P ++ +I+ L A+ Sbjct: 724 WYIRRNRRRFWGSELTEDKKA--VFNTTFEVLEGLARLVAPFAPYISEEIYTKLTGAE 779 >gi|218295828|ref|ZP_03496608.1| leucyl-tRNA synthetase [Thermus aquaticus Y51MC23] gi|218243566|gb|EED10094.1| leucyl-tRNA synthetase [Thermus aquaticus Y51MC23] Length = 878 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 9/195 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +R K Y+ YP+ H+GH + DVLARF ++ G +VL G D G AA Sbjct: 31 KRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRKVQGYEVLHPMGWDAFGLPAENAA 90 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120 G+ + + QN R ++ +++ I Y D + T E ++ + ++ K+ +KG Y Sbjct: 91 LKFGLHPRDWTYQNIRQAKESLELMGILYDWDREVTTCEPDYYRWNQWIFIKMWEKGLAY 150 Query: 121 K-GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 + G W N+ V +G+ + + PV+ E ++ R++AY D+LL Sbjct: 151 RAGGLVNWCPKCQTVLANEQVV----EGRCWRHEDTPVEKRELTQWYLRITAYADRLLQD 206 Query: 180 YES--HPEFILPIER 192 E PE + ++R Sbjct: 207 LEGLDWPEKVKAMQR 221 >gi|228941625|ref|ZP_04104172.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974554|ref|ZP_04135120.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981149|ref|ZP_04141449.1| Valyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228778349|gb|EEM26616.1| Valyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228784957|gb|EEM32970.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817837|gb|EEM63915.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 881 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+RYFL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T ++ D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|319427333|gb|ADV55407.1| leucyl-tRNA synthetase [Shewanella putrefaciens 200] Length = 859 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 17/240 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+ARF RL G +VL G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 N + +N ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 92 NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 S + DE +++V DG + PV+ E +F +++AY ++LL+ Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 + PE + ++R R+E + ++ KTFD PD + YV I A Sbjct: 208 TLDGWPEQVKTMQRNWIGRSEGVEMTFG----VAGHDKTFDIYTTRPDTLMGVTYVAIAA 263 >gi|317055676|ref|YP_004104143.1| valyl-tRNA synthetase [Ruminococcus albus 7] gi|315447945|gb|ADU21509.1| valyl-tRNA synthetase [Ruminococcus albus 7] Length = 897 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 114/256 (44%), Gaps = 18/256 (7%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289 W + + G+ D F+P V G DI+ F W + ++ + L K Sbjct: 475 TWFSSALWPFSILGWPDKQSDDFNYFYPTSTLVTGYDIIGF----WVSRMIFSGLAYTGK 530 Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 V HG + +G K+SKSLGN IDP+EVI++ G DALR+ LV+ + G D Y + Sbjct: 531 APFDTVLIHGIVRDSQGRKMSKSLGNGIDPLEVIDQYGADALRFMLVQGSSPGNDMRYSE 590 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 + + N N I N S +++ I P T D+ ILS ++V++E+ Sbjct: 591 EKIVAMRN--FTNKIWNA---SRFLLMNMTIDKIELPKELTLEDKWILSSLNKVIKEVTY 645 Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461 N+++ + A +V + S D Y + K + V V V+ + + Sbjct: 646 NLEHFEMGVAAQKVYDFIWNSFCDWYIELAKN-RFNGEDAQAKKNVENVLAYVLTDILKM 704 Query: 462 LQAFVPKLANKIFDIL 477 L F+P + +I+ L Sbjct: 705 LHPFMPFITEEIYQAL 720 Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust. Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 29/191 (15%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S A+ PN Q H+GHA + + D+L RF R+ G L+ GTD KI +A + Sbjct: 39 SIAMPPPNVTGQLHMGHAVDNTMQDILTRFKRMQGYAALWIPGTDHAAIATEAKIVEAMR 98 Query: 64 NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G+T + F + R + D + F T + + Sbjct: 99 QEGITKADLGRDKFMERAWAWKEKFGGRIVEQLRTLGTSCDWEREHF--TMDDQCSKAVL 156 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYF 166 ++ K+ ++G IY+G + + + +D EV Y DG +++ + ++E G F Sbjct: 157 EVFVKLYEEGLIYRGNRMVNWCPKCQTSISDAEVEYDNKDGNFWHILYK----VKETGEF 212 Query: 167 FRLSAYQDKLL 177 ++ + + + Sbjct: 213 LEIATTRPETM 223 >gi|120597870|ref|YP_962444.1| leucyl-tRNA synthetase [Shewanella sp. W3-18-1] gi|166231645|sp|A1RGU5|SYL_SHESW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|120557963|gb|ABM23890.1| leucyl-tRNA synthetase [Shewanella sp. W3-18-1] Length = 859 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 17/240 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+ARF RL G +VL G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 N + +N ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 92 NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 S + DE +++V DG + PV+ E +F +++AY ++LL+ Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 + PE + ++R R+E + ++ KTFD PD + YV I A Sbjct: 208 TLDGWPEQVKTMQRNWIGRSEGVEMTFG----VAGHDKTFDIYTTRPDTLMGVTYVAIAA 263 >gi|315045129|ref|XP_003171940.1| leucyl-tRNA synthetase [Arthroderma gypseum CBS 118893] gi|311344283|gb|EFR03486.1| leucyl-tRNA synthetase [Arthroderma gypseum CBS 118893] Length = 946 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 8/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y+ YP+ H+GH I+DVLARF ++ G DVL G D G AA Sbjct: 76 KEKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKQMKGYDVLHPMGWDAFGLPAENAAI 135 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+ + + QN N RD L I + D + T + + L+ + +KG Y+ Sbjct: 136 ERGIHPEGWTKQNIANMRDQLKDLGIRFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLAYQ 195 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177 Y D+ +++V A+G + + V+ E + +FFR++++++ LL Sbjct: 196 AEAVVNYDPIDKTVLANEQVVD-ANGCSWRSGAK-VEKRELKQWFFRITSFKEALLKDLD 253 Query: 178 SYYESHPEFILPIER 192 S S P+ IL ++R Sbjct: 254 SLSGSWPDRILTMQR 268 >gi|315641423|ref|ZP_07896496.1| ehrlichia chaffeensis immunodominant surface protein [Enterococcus italicus DSM 15952] gi|315482810|gb|EFU73333.1| ehrlichia chaffeensis immunodominant surface protein [Enterococcus italicus DSM 15952] Length = 898 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 121/279 (43%), Gaps = 29/279 (10%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G+ P DP+ ++ W + +T G+ D +++P + V G DI+ F Sbjct: 449 GMTEPSDPENWHQDNDVLDTWFSSALWPFSTMGWPDTDSADFKRYFPTNTLVTGYDIIFF 508 Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ +L K V HG I +G K+SKSLGN IDP+EVIE+ G DA Sbjct: 509 ----WVSRMIFQSLEFTDRRPFKNVLMHGLIRDEQGRKMSKSLGNGIDPMEVIEKYGADA 564 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---- 380 LR+FL A G+D + + + D A N + + +L + +GM Sbjct: 565 LRWFLSNGSAPGQDVRFSYEKM------DAAWNFINKIWNASRFVLMNCEGMTAAELQIN 618 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438 G + +D IL+ + + ++ + A Q+ + + + D Y + K L Sbjct: 619 GEKSVADRWILARLNETVAKVTDLFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-TLYG 677 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 N T V V V+ Q LL +P + +I+ L Sbjct: 678 ENEAAKQTNKAVLVYVLDQSLRLLHPIMPFVTEEIWSKL 716 Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 60 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLR 119 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + + LD S + F T ++ + R Sbjct: 120 EQGISRYDLGREKFVDQVWEWKEEYAGHIREQWSKLGLSLDYSRERF--TLDEGLSEAVR 177 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G Y W A + + ++K +G +Y+ + Sbjct: 178 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 225 >gi|313885106|ref|ZP_07818858.1| valine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8] gi|312619797|gb|EFR31234.1| valine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8] Length = 877 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 86/179 (48%), Gaps = 8/179 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + + Sbjct: 445 VLDTWFSSALWPFSTMGWPDKSQNDYQRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGQR 504 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K V HG I +G K+SKSLGN IDP++VIEE GVDALR+FL A G+D Y Sbjct: 505 PF-KNVLLHGLIRDEEGRKMSKSLGNGIDPMDVIEEYGVDALRWFLANGSAPGQDVRYSP 563 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-SDESILSVCSRVLQEI 401 + L N N I N SR V M + D G+ T +D+ ILS ++ + Sbjct: 564 EKLAAAWN--FINKIWN-ASRYVLMKVGDMTLADVEIGSDTSLADQWILSRLQETIETV 619 Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 18/110 (16%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA+++ + D+L R R+ G D L+ G D G A A V Sbjct: 40 SIVIPPPNVTGKLHLGHAWDVTLQDMLIRQKRMLGFDTLWLPGMDHAG-----IATQAKV 94 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHHDTCRILWKKIS 114 K+ + SR D+ + F+ T ++ + T R W K+ Sbjct: 95 EAKLKEEGLSR--------YDLGREKFLEKTWEWKEEYAQTIRQQWAKMG 136 >gi|193794510|gb|ACF21467.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + ++ DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P D +L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPEPAELEAIDRVLLDAVEAGFASVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVADL 166 >gi|88601905|ref|YP_502083.1| isoleucyl-tRNA synthetase [Methanospirillum hungatei JF-1] gi|121731688|sp|Q2FPJ4|SYI_METHJ RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|88187367|gb|ABD40364.1| Isoleucyl-tRNA synthetase [Methanospirillum hungatei JF-1] Length = 1062 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 126/271 (46%), Gaps = 26/271 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 I VW D+ T G+ N D + WPAD G+D R F++ A ++ N Sbjct: 515 IFDVWFDSAMASWATLGFPRN-DALFHEMWPADFITEGQDQTRGWFYSQL-GASTIAFNR 572 Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 K V HGF L G K+SKSLGNV+ P EV+++ GVD LR +++ A +D ++ Sbjct: 573 SPYKSVLMHGFALDADGRKMSKSLGNVVTPEEVVQKFGVDVLRLYILSSNAPWEDLKFNW 632 Query: 344 DGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAF------------TESDESI 390 DG+ VN + N + N+ + MIL + + G + E D I Sbjct: 633 DGVST-VNRTM-NILWNVYRFPLPYMILDGFSPAQTSDGKYDDEYIVRSYREMPEIDRWI 690 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDR-YFDAQKP--WELKKTNPDRAST 446 +S + + + + +M +HR +++ + E + R Y +P W L++ +PD+ Sbjct: 691 ISRINTIARSVSADMDEYQLHRVTRLLMNFILEDLSRWYVQIVRPRMW-LEEDSPDKKFA 749 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +T +R L LL F P + +++ L Sbjct: 750 YETITY-CLRTLCRLLAPFTPHITEAMYENL 779 >gi|148654314|ref|YP_001274519.1| valyl-tRNA synthetase [Roseiflexus sp. RS-1] gi|148566424|gb|ABQ88569.1| valyl-tRNA synthetase [Roseiflexus sp. RS-1] Length = 904 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 91/350 (26%), Positives = 148/350 (42%), Gaps = 52/350 (14%) Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 E +F R D L+ I+P ER +V ++D +SR+ + WG +IP Sbjct: 382 EQWFVRARPLADLALAAVREGRTRIVP-ERFEKVFFHWLENIQDWCISRQLW-WGHRIPV 439 Query: 222 -------------DDPQY----------IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWP 257 DDP ++ W + +T G+ D+ PD +F+P Sbjct: 440 WYTPDGQMIVPGPDDPDPQGEGLVQDPDVLDTWFSSALWPFSTLGWPDDTPD--MRRFYP 497 Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVI 311 + G DIL +W A ++ L K V+ HG + K G K+SK+ GNV+ Sbjct: 498 TSVMETGYDIL----FFWVARMMMMGCYLTGKTPFHTVYLHGLVRDKDGRKMSKTYGNVV 553 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 +P++VIE+ G DALR+ L + G+D + + ++ N AN N+ +L Sbjct: 554 NPLDVIEQHGADALRFMLATSSSPGQDLNLNPERIEAARN--FANKTWNI----ARFVLS 607 Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSE-VDRY 427 D P P T +D ILS R++ ++ M++ A + L SE D Y Sbjct: 608 KLDAHTPPGDPRPATLADRWILSRYHRLVTDVDRLMRSYNFGEAGRSIQEFLWSEFADWY 667 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + K + + VLY T+E + LL F+P + + + L Sbjct: 668 VEVAKVQFEQDALQESTRAVLYTTLEGALR---LLHPFMPFVTEETWQYL 714 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 35/214 (16%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58 +R IS + H+GHA + I DVL R+HR+ G L+ GTD G ++ Sbjct: 42 DRPPFVISMPPPNVTGELHMGHAMFVAIEDVLTRWHRMLGDPTLWLPGTDHAGIATQLQV 101 Query: 59 AKAAQNAGVTTK-----VFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRH 102 + Q+ GVT + F+ + +R R + D + + F T + Sbjct: 102 ERLLQSEGVTRQQIGREAFLRRTWEWKEKYGGEITRQLRRLGASCDWTRERF--TLDPML 159 Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH------- 154 R +K++ D G IY+G +S + +D EV Y+ D Q Y+ ++ Sbjct: 160 SRAVRAAFKRLYDDGLIYRGYRMVNWSPNLQTAVSDLEVEYEERDVQMYHVRYPLADDGW 219 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 +P W R ++ + ++ + PE I+ Sbjct: 220 HPAAWGSG-----RWASGAREFITVATTRPETIM 248 >gi|116493039|ref|YP_804774.1| valyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] gi|116103189|gb|ABJ68332.1| valyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] Length = 888 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 15/186 (8%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 DP ++ W + TT G+ D +++P V G DI+ F W A ++ Sbjct: 450 DPD-VLDTWFSSALWPFTTMGWPDENSADFKRYFPTSTLVTGYDIIFF----WVARMIFQ 504 Query: 283 NLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 +L K V HG I +G K+SKSLGN IDP++VI++ G DALR+FL G Sbjct: 505 SLEFTGKRPFKDVLLHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSTAG 564 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395 +D + D + N N I N SR V M L + +P T +D+ ILS + Sbjct: 565 QDLRFSYDKMDSAWN--FINKIWN-ASRYVIMNLDQVEQPKLPELSQLTLADKWILSRLN 621 Query: 396 RVLQEI 401 + ++++ Sbjct: 622 KTVEQV 627 Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 25/184 (13%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D+L R R+ G D ++ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMLGYDTVWIPGMDHAGIATQAKVEAKLR 101 Query: 64 NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109 GV+ + FVDQ + AD L + YD T ++ + + Sbjct: 102 EQGVSRYDLGREKFVDQVWEWKDEYADTIHQQWAKMGLSLDYDRERFTLDEGLSKAVKKV 161 Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYFFR 168 + + +KG IY+G Y + + +D EV ++ G +Y+ ++ + +EG+ F Sbjct: 162 FVTLYEKGLIYRGEYIINWDPQARTALSDIEVEHQDDQGAFYHVKY----FFADEGFEFN 217 Query: 169 LSAY 172 Y Sbjct: 218 GKNY 221 >gi|227892642|ref|ZP_04010447.1| valine--tRNA ligase [Lactobacillus ultunensis DSM 16047] gi|227865513|gb|EEJ72934.1| valine--tRNA ligase [Lactobacillus ultunensis DSM 16047] Length = 879 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 115/269 (42%), Gaps = 41/269 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+L ++ + ER + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLENQKTAGKVNFVPERFEGTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D +++P + Sbjct: 419 NKKTGETYVGVEAPKDAENWEQDPD-VLDTWFSSALWPFSTLGWPDTDSADFKRYFPTNA 477 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314 V G DI+ F W + ++ +L K + +LH +G K+SKSLGN +DP+ Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372 +V+++ G DALR+FL+ A G+D YD L N N I N SR V M L + Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPEDA 590 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F +D I + V+ E+ Sbjct: 591 KPAHMPDVSKFDLADSWIFDRLNHVVGEV 619 Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L RF R+ G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98 Query: 64 NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G + + FV Q + M LD S + F T +K + Sbjct: 99 KQGKDRHQMGREAFVKQVWDWKDEYAAIIKGQWAKMGLSLDYSRERF--TLDKGLSKAVK 156 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ ++G IY+G Y W A + + ++K G +Y+ ++ Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDDKGAFYHIKY 204 >gi|326476475|gb|EGE00485.1| leucyl-tRNA synthetase [Trichophyton tonsurans CBS 112818] Length = 933 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y+ YP+ H+GH I+DVLARF R+ G DVL G D G AA Sbjct: 75 KEKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKRMKGYDVLHPMGWDAFGLPAENAAI 134 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+ + + QN N ++ L I + D + T + + L+ + +KG Y+ Sbjct: 135 ERGIHPEGWTKQNIANMKNQLKDLGIRFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLAYQ 194 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177 Y D+ +++V A+ V+ E + +FFR++A+++ LL Sbjct: 195 AEAVVNYDPVDKTVLANEQVDSNGCSWRSGAK---VEKRELKQWFFRITAFKEALLKDLD 251 Query: 178 SYYESHPEFILPIER 192 S S P+ IL ++R Sbjct: 252 SLSGSWPDRILTMQR 266 >gi|260495228|ref|ZP_05815356.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_33] gi|260197285|gb|EEW94804.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_33] Length = 859 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + + YP+ + H+GHA I DV++R+ R+ G +VL G D G AA Sbjct: 32 KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G ++ N N + ++ SYD I + ++ + L+K++ +KG IYK Sbjct: 92 QNGTHPAIWTKSNIENMKRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + +++V DG + V E E +FF+++ Y D+LL +E Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208 Query: 182 ----SHPEFILPIER 192 PE +L +++ Sbjct: 209 EIKDGWPEKVLTMQK 223 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 92/180 (51%), Gaps = 15/180 (8%) Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K EK+SKS N +DP E++++ G D R F++ K+ ++++GL + Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417 LV + ++ K D + ++ D+++L ++ ++++ + ++N + A+A Sbjct: 666 WRLVFENSEIVKKSNDKI--DYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAAN 723 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + L++EV Y + N ++A+ +L T ++++ I+L FVP ++I++ L Sbjct: 724 MELINEVQTYVASS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 773 >gi|302660650|ref|XP_003022002.1| hypothetical protein TRV_03896 [Trichophyton verrucosum HKI 0517] gi|291185926|gb|EFE41384.1| hypothetical protein TRV_03896 [Trichophyton verrucosum HKI 0517] Length = 975 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 39/280 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y+ YP+ H+GH I+DVLARF ++ G DVL G D G AA Sbjct: 75 KEKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKQMKGYDVLHPMGWDAFGLPAENAAI 134 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+ + + QN N R+ L I + D + T + + L+ + +KG Y+ Sbjct: 135 ERGIHPEGWTKQNIANMRNQLKDLGIRFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLAYQ 194 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177 Y D+ +++V A+ V+ E + +FFR++A+++ LL Sbjct: 195 AEAVVNYDPVDKTVLANEQVDSNGCSWRSGAK---VEKRELKQWFFRITAFKEALLKDLD 251 Query: 178 SYYESHPEFILPIER------RNEVISFVKSGLKDLSLSRKTFDWGI--KIPDDPQYIMY 229 S S P+ IL ++R R ++ F LS+ +T D + PD + Y Sbjct: 252 SLSGSWPDRILTMQRHWLGKSRGALVPFT------LSIPGETLDIEVFTTRPDTLHGVQY 305 Query: 230 VWIDA--------------LTNYLTTTGYLDNPDGSKAKF 255 + + L ++ +TG L P +KA F Sbjct: 306 IALSTSHPVVKKMAANTPELQEFINSTGSL--PPETKAGF 343 Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 15/190 (7%) Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD---GLKK------RVN 351 EK+SKS N +DP IE G DA R ++ + +D+ G+++ + Sbjct: 673 EKMSKSKYNGVDPNTCIESYGADATRAHVLFSAPVSEVLEWDETKIVGIQRWFSRIWKAV 732 Query: 352 ADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410 D N + S L + M +P +E++ ++L + + + + ++ Sbjct: 733 EDTGNSLKRANFSSAPDALSSLNDMALPPLDKLSETESNLLHMTNNTISSVSYCLEKN-- 790 Query: 411 HRALAQVIS-LVSEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEV-IRQLAILLQAFVP 467 L VIS L+ + P E KT+P S T L+ T+ + + L +L P Sbjct: 791 QYGLNTVISDLIKLTNAISAVPLPEESSKTSPSAQSVTPLHTTLYIALNSLLRMLAPIAP 850 Query: 468 KLANKIFDIL 477 A++ +++L Sbjct: 851 AFASECWEVL 860 >gi|257452950|ref|ZP_05618249.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|317059491|ref|ZP_07923976.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|313685167|gb|EFS22002.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] Length = 854 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 11/196 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + YP+ + H+GHA I DV+AR+ R+ G +VL G D G AA Sbjct: 34 KENYYVLEMLPYPSGKLHVGHARNYTIGDVIARYKRMKGYNVLHPMGWDSFGLPAENAAI 93 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120 G + N N + +L SY D I + ++ + ++KK+ +KG +Y Sbjct: 94 QNGAHPAKWTKSNIENMKRQLKLLGFSYDWDREIASYTPEYYKWNQWIFKKMYEKGLVYK 153 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K W N+ + DG+ + V E E +FF+++ Y D+LL + Sbjct: 154 KKSLVNWCPDCKTVLANE----QVEDGKCWRHSKTAVIQKELEQWFFKITDYADELLEGH 209 Query: 181 E----SHPEFILPIER 192 E PE +L +++ Sbjct: 210 EELRGGWPEKVLTMQK 225 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 44/208 (21%), Positives = 102/208 (49%), Gaps = 34/208 (16%) Query: 278 FLLSANLPLP-KKVFSHGF---ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 FL + + L +K FS ++ K EK+SKS N +DP E+I + G D R F++ Sbjct: 585 FLFAEEVELKGEKAFSKKTGEELVVKVEKMSKSKNNGVDPEEMILKYGADTTRLFIMFAA 644 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---GAFTESDESI 390 K+ ++++GL G ++R ++L++ D + A ++D+++ Sbjct: 645 PPEKELEWNENGLA---------GAYRFLTRVWRLVLENQDHISLEKIDYTAINKADKAL 695 Query: 391 LSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 + ++ ++++ E++++ + ++A + L+++V Y ++ + Y Sbjct: 696 IIKLNQTIKKVTESIEDDYHFNTSIAATMELLNDVQAY---------------QSDSTQY 740 Query: 450 VTV--EVIRQLAILLQAFVPKLANKIFD 475 V E ++Q+ I+L FVP +++++ Sbjct: 741 TRVLGEALKQIVIMLSPFVPHFCDELWE 768 >gi|295692675|ref|YP_003601285.1| valyl-tRNA synthetase [Lactobacillus crispatus ST1] gi|295030781|emb|CBL50260.1| Valyl-tRNA synthetase [Lactobacillus crispatus ST1] Length = 879 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 41/269 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+L ++ + ER + + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLENQKTDGKVNFVPERFEQTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D +++P + Sbjct: 419 NKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTNAEDFKRYFPTNA 477 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314 V G DI+ F W + ++ +L K + +LH +G K+SKSLGN +DP+ Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK--D 372 +V+++ G DALR+FL+ A G+D YD L N N I N SR V M L Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPADA 590 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F SD I + + E+ Sbjct: 591 KPAHMPDASKFDLSDRWIFDRLNHTVSEV 619 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L RF R+ G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98 Query: 64 NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G + + FV Q + M LD S + F T +K + Sbjct: 99 KQGKDRHQMGREAFVKQVWDWKDEYASIIKGQWAKMGLSLDYSRERF--TLDKGLSKAVK 156 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ ++G IY+G Y W A + + ++K G +Y+ ++ Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDDKGAFYHIKY 204 >gi|257466670|ref|ZP_05630981.1| leucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] gi|315917824|ref|ZP_07914064.1| leucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] gi|313691699|gb|EFS28534.1| leucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] Length = 854 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 11/196 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + YP+ + H+GHA I DV+AR+ R+ G +VL G D G AA Sbjct: 34 KENYYVLEMLPYPSGKLHVGHARNYTIGDVIARYKRMKGYNVLHPMGWDSFGLPAENAAI 93 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120 G + N N + +L SY D I + ++ + ++KK+ +KG +Y Sbjct: 94 QNGAHPAKWTKSNIENMKRQLKLLGFSYDWDREIASYTPEYYKWNQWIFKKMYEKGLVYK 153 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K W N+ + DG+ + V E E +FF+++ Y D+LL + Sbjct: 154 KKSLVNWCPDCKTVLANE----QVEDGKCWRHSKTAVIQKELEQWFFKITDYADELLEGH 209 Query: 181 E----SHPEFILPIER 192 E PE +L +++ Sbjct: 210 EELRGGWPEKVLTMQK 225 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 44/208 (21%), Positives = 102/208 (49%), Gaps = 34/208 (16%) Query: 278 FLLSANLPLP-KKVFSHGF---ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 FL + + L +K FS ++ K EK+SKS N +DP E+I + G D R F++ Sbjct: 585 FLFAEEVELKGEKAFSKKTGEELVVKVEKMSKSKNNGVDPEEMILKYGADTTRLFIMFAA 644 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---GAFTESDESI 390 K+ ++++GL G ++R ++L++ D + A ++D+++ Sbjct: 645 PPEKELEWNENGLA---------GAYRFLTRVWRLVLENQDHISLEKIDYTAINKADKAL 695 Query: 391 LSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 + ++ ++++ E++++ + ++A + L+++V Y ++ + Y Sbjct: 696 IIKLNQTIKKVTESIEDDYHFNTSIAATMELLNDVQAY---------------QSDSTQY 740 Query: 450 VTV--EVIRQLAILLQAFVPKLANKIFD 475 V E ++Q+ I+L FVP +++++ Sbjct: 741 TRVLGEALKQIVIMLSPFVPHFCDELWE 768 >gi|237743871|ref|ZP_04574352.1| leucyl-tRNA synthetase [Fusobacterium sp. 7_1] gi|229432902|gb|EEO43114.1| leucyl-tRNA synthetase [Fusobacterium sp. 7_1] Length = 859 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + + YP+ + H+GHA I DV++R+ R+ G +VL G D G AA Sbjct: 32 KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G ++ N N + ++ SYD I + ++ + L+K++ +KG IYK Sbjct: 92 QNGTHPAIWTKSNIENMKRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + +++V DG + V E E +FF+++ Y D+LL +E Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208 Query: 182 ----SHPEFILPIER 192 PE +L +++ Sbjct: 209 EIKDGWPEKVLTMQK 223 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 92/180 (51%), Gaps = 15/180 (8%) Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K EK+SKS N +DP E++++ G D R F++ K+ ++++GL + Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417 LV + ++ K D + ++ D+++L ++ ++++ + ++N + A+A Sbjct: 666 WRLVFENSEIVKKSNDKI--DYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAAN 723 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + L++EV Y + N ++A+ +L T ++++ I+L FVP ++I++ L Sbjct: 724 MELINEVQTYVASS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 773 >gi|269865023|ref|XP_002651778.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348] gi|220063894|gb|EED42278.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348] Length = 278 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 40/267 (14%) Query: 5 EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +K+++++A+ Y N QPH+G+ ++ ADV +RF R G DV++ +GTDE+G I A+ Sbjct: 10 KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD----- 118 T + V +N +++ D ++ +D F T +HH+ + ++ K D D Sbjct: 70 KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIFLKTIDHFDEKEIN 129 Query: 119 ---------------IYKGCYSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPVQ 158 I C G + D+ Y+ D + + + + + P Q Sbjct: 130 QMFCPKCKQFLADRYIEGECACGATTHGDQCDTCGRYHEDSQ--ELTNFRCSICKTTP-Q 186 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWG 217 + FF L ++L Y+++ R +++K L ++RK WG Sbjct: 187 IKTTKQLFFNL----NELQHYFQTMDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWG 242 Query: 218 IKIP----DDPQYIMYVWIDALTNYLT 240 + +P DD + YVW DA YL+ Sbjct: 243 VPVPLKEYDDK--VFYVWYDAPIGYLS 267 >gi|269865054|ref|XP_002651788.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348] gi|220063873|gb|EED42268.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348] Length = 313 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 40/267 (14%) Query: 5 EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +K+++++A+ Y N QPH+G+ ++ ADV +RF R G DV++ +GTDE+G I A+ Sbjct: 10 KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD----- 118 T + V +N +++ D ++ +D F T +HH+ + ++ K D D Sbjct: 70 KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIFLKTIDHFDEKEIN 129 Query: 119 ---------------IYKGCYSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPVQ 158 I C G + D+ Y+ D + + + + + P Q Sbjct: 130 QMFCPKCKQFLADRYIEGECACGATTHGDQCDTCGRYHEDSQ--ELTNFRCSICKTTP-Q 186 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWG 217 + FF L ++L Y+++ R +++K L ++RK WG Sbjct: 187 IKTTKQLFFNL----NELQHYFQTMDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWG 242 Query: 218 IKIP----DDPQYIMYVWIDALTNYLT 240 + +P DD + YVW DA YL+ Sbjct: 243 VPVPLKEYDDK--VFYVWYDAPIGYLS 267 >gi|86158812|ref|YP_465597.1| valyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] gi|85775323|gb|ABC82160.1| valyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] Length = 1052 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 83/350 (23%), Positives = 147/350 (42%), Gaps = 48/350 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 ++ R+ + E +P + N ++++++ + D +SR+ + WG +IP Sbjct: 375 WYVRIEPLARPAIEAVEQGKTRFIPEQWTNTYMAWMRN-IHDWCISRQLW-WGHQIPAWY 432 Query: 222 ----------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257 + P+ ++ W + +T G+ + D + F+P Sbjct: 433 CPDGHVTVARETPEACSTCGKRELRQDEDVLDTWFSSGLWPFSTMGWPEQTDTLRT-FYP 491 Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVI 311 + G DI+ +W A ++ L +V LH KG+K+SK+ GNVI Sbjct: 492 TSVMETGHDII----FFWVARMMMMGLHFMGEVPFRTVYLHPMVRDEKGQKMSKTKGNVI 547 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 DP+ + E+ G DALR+ L A G+D K+ ++ AN + N SR M L Sbjct: 548 DPLVITEQYGADALRFTLAALTAQGRDIKLAKERIEG--YRAFANKLWN-ASRFALMNLA 604 Query: 372 DYD--GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427 Y+ G P A T +D IL+ R + E E + + A V + V D Y Sbjct: 605 GYEERGEDPARAARTPADRWILARLQRTVNETVEALDAFRFNDAANAVYAFVWHELCDWY 664 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + K L +P+ +V V V ++ LL F+P + +++ +L Sbjct: 665 IELSKE-ALASEDPEARRSVQAVLVHCLQTSYRLLHPFMPFITEELWHVL 713 Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 +R + S + PN H+GHA + DVL R+ R+ G + L+ GTD G Sbjct: 44 DRTRPPFSIVLPPPNVTGSLHLGHALTATLQDVLIRWKRMSGFNTLWLPGTDHAG 98 >gi|227535262|ref|ZP_03965311.1| valine--tRNA ligase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187146|gb|EEI67213.1| valine--tRNA ligase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 880 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 15/188 (7%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 DP ++ W + +T G+ D +++P D V G DI+ F W A ++ Sbjct: 444 DPD-VLDTWFSSALWPFSTMGWPDTDSPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 498 Query: 283 NLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 L K HG + +G K+SKSLGN IDP++VIE+ G DALR+FL+ G Sbjct: 499 GLHFTGERPFKYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 558 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395 +D + ++ N N I N +SR V M L D + P P F SD+ + + + Sbjct: 559 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLEKPQQPDPSTFDLSDKWLFAQLN 615 Query: 396 RVLQEIRE 403 ++++ + Sbjct: 616 ETIKQVTD 623 Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 15/89 (16%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 41 SIVIPPPNVTGKLHMGHAWDTTLQDIVIREKRMQGFDTLWLPGMD-----------HAGI 89 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIR 96 T+ V+ R ++ D+ D F++ Sbjct: 90 ATQAKVEAKLR--KEGISRYDLGRDKFVQ 116 >gi|229032112|ref|ZP_04188090.1| Valyl-tRNA synthetase [Bacillus cereus AH1271] gi|228729202|gb|EEL80200.1| Valyl-tRNA synthetase [Bacillus cereus AH1271] Length = 867 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 86/349 (24%), Positives = 151/349 (43%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K + + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 350 WFVKMAPLAEKAVELQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407 Query: 222 -------------DDPQYI---------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 ++P I + W + +T G+ + +++ D Sbjct: 408 WYHKETGEVYVGTEEPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 467 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+RYFL A G+D + + ++ N N I N SR V M + D Sbjct: 524 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686 Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T ++ D Sbjct: 87 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 146 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194 >gi|228987710|ref|ZP_04147821.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771984|gb|EEM20439.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 867 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 467 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +EVIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 524 MEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686 Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T ++ D Sbjct: 87 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 146 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194 >gi|322367954|ref|ZP_08042523.1| isoleucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] gi|320551970|gb|EFW93615.1| isoleucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] Length = 1065 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 79/307 (25%), Positives = 142/307 (46%), Gaps = 23/307 (7%) Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254 E + + + DL++++ + ++PD + VW+D+ T Y NPD + + Sbjct: 503 EDVDLHRPTVDDLTITKDGTTY-TRVPD----VFDVWLDSSVASWGTLDYPSNPDDFE-E 556 Query: 255 FWPADLHVIGKDILRFHAIYWPAFLL--SANLPLP-KKVFSHGFILHK-GEKISKSLGNV 310 WPADL + D R +W + +A +P +V HG+ L + G K+SKS+GN+ Sbjct: 557 LWPADLIMEAHDQTR--GWFWSQLGMGTAALDEVPYDEVLMHGWALAEDGRKMSKSIGNI 614 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MI 369 + P E IE G D +R FL+ + G+D + D ++ + N + N+ + M Sbjct: 615 VSPEEAIERHGADPMRLFLLSQNPQGEDMRFSWDEMQNMQRS--LNILWNVFRFPLPYMR 672 Query: 370 LKDYD-GMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDR 426 L +D + A TE DE +LS V E+ E+ + +AL ++ V E V R Sbjct: 673 LDGFDPDEVDVQDAETELVDEWLLSRLQTVTTEMTEDWDDFRQDKALRTLLDFVVEDVSR 732 Query: 427 YFDA---QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 ++ ++ W+ + +A+ + V+++L LL F P ++ I+ L + Sbjct: 733 FYIQVVRERMWDEADSASKQAAYATF--YHVLKELVALLAPFAPFVSEDIYQNLTGDEGE 790 Query: 484 RCFQSLD 490 LD Sbjct: 791 ESVHMLD 797 >gi|229198587|ref|ZP_04325289.1| Valyl-tRNA synthetase [Bacillus cereus m1293] gi|228584869|gb|EEK42985.1| Valyl-tRNA synthetase [Bacillus cereus m1293] Length = 867 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 467 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +EVIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 524 MEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686 Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T ++ D Sbjct: 87 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 146 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194 >gi|193794512|gb|ACF21468.1| methionyl-tRNA synthetase [Actinomyces johnsonii] gi|193794524|gb|ACF21474.1| methionyl-tRNA synthetase [Actinomyces johnsonii] Length = 168 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + + DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLARYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP P + D ++L + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GRIPEPVELQDIDRALLDAVEAGFASVGGLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ +V+ L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQVVTDL 166 >gi|217077950|ref|YP_002335668.1| valyl-tRNA synthetase [Thermosipho africanus TCF52B] gi|217037805|gb|ACJ76327.1| valyl-tRNA synthetase [Thermosipho africanus TCF52B] Length = 864 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 22/265 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ +N K +F+P D+ V G DI+ F W A ++ Sbjct: 447 VLDTWFSSALWPFSTLGWPENTSDLK-EFYPTDVLVTGFDIIFF----WVARMVMMGYEF 501 Query: 287 PKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K V+ H + K G K+SKSLGN IDP+EVI+E G D +R+ L A G+D Sbjct: 502 MGKKPFNDVYIHQLVRDKFGRKMSKSLGNGIDPLEVIQEYGADPMRFTLALLAAQGRDIK 561 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 D + + AN I N +R + M L+DY IP SD+ ILS + ++ Sbjct: 562 LDIKNID--TSKKFANKIWN-ATRFIIMNLEDYKE-IPLEN-LNLSDKWILSRLQKTIKN 616 Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 + ++ + A ++ + + D Y + KP + + V V V V+ Sbjct: 617 VTNAIEQYEFNLAAREIYNFFWDEFCDWYIEVSKP----RLKTEEKHLVQNVLVTVLDNS 672 Query: 459 AILLQAFVPKLANKIFDILFVADEN 483 LL F+P + +++ L + E+ Sbjct: 673 LKLLHPFMPFITEELWQKLPTSGES 697 Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 21/162 (12%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA + + D+L RF R++G L+ G D G + KA + Sbjct: 38 SIVIPPPNITGKIHMGHALNITLQDILVRFKRMNGFKTLWVPGEDHAGIATQTAVEKAIE 97 Query: 64 NAG-----VTTKVFVD---------QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109 G + + F++ +N+ + MA + + T ++ + + Sbjct: 98 KEGKKREELGREKFLEIVWDWANTYRNTIKNQIMAIGASVDWTRERFTLDEGLSKAVKKV 157 Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150 + + KG IYKG Y + R + +D+EV Y+ DG+ Y Sbjct: 158 FVSLYKKGLIYKGKYIVNWCPRCKTVLSDEEVEYEEHDGKLY 199 >gi|85706318|ref|ZP_01037412.1| valyl-tRNA synthetase [Roseovarius sp. 217] gi|85669091|gb|EAQ23958.1| valyl-tRNA synthetase [Roseovarius sp. 217] Length = 1033 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 80/325 (24%), Positives = 144/325 (44%), Gaps = 38/325 (11%) Query: 171 AYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229 AY D+L S ++ + R+E + + S L + + ++ DP +++Y Sbjct: 548 AYHDRLASLPVPLAAMRVVEVASRDEALHQLASALAEYTATQ-----------DPTHLVY 596 Query: 230 -VWIDA------LTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLL 280 VW D ++ L G L P+ + +++P + + G DI+ F W A ++ Sbjct: 597 PVWRDPDVLDTWFSSGLWPIGTLGWPEDTAELKRYFPTSVLITGFDIIFF----WVARMM 652 Query: 281 SANLPL-PKKVFSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 + +K FSH ++ KG+K+SKSLGNV+DP+++I + G DA+R+ L A Sbjct: 653 MMQYAVVGQKPFSHVYVHALVRDEKGKKMSKSLGNVLDPLDLIADYGTDAVRFTLTSMAA 712 Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 G+D K+ + N + N + GM+PTP A ++ I+ Sbjct: 713 MGRDLKLSKERIAGYRN--FTTKLWNAARFAEMNGAVGSTGMVPTPTATV--NKWIIGET 768 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 ++ + E ++N + A + + V + D Y + KP L +A T + Sbjct: 769 AKTRATVDEALENFRFNDAAGALYAFVWGTVCDWYVEFSKPLLLDGDAATKAETQATMAW 828 Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477 VI Q ILL P + +++ L Sbjct: 829 -VIDQGLILLHPITPFITEELWGTL 852 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 13/68 (19%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA+ + D+L R+HR+ G D L+ G D +AG+ Sbjct: 46 SIMIPPPNVTGSLHMGHAFNNTLQDILIRWHRMRGHDTLWQPGQD-----------HAGI 94 Query: 68 TTKVFVDQ 75 T++ V++ Sbjct: 95 ATQMVVER 102 >gi|327382286|gb|AEA53762.1| Valyl-tRNA synthetase [Lactobacillus casei LC2W] gi|327385481|gb|AEA56955.1| Valyl-tRNA synthetase [Lactobacillus casei BD-II] Length = 880 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 15/186 (8%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 DP ++ W + +T G+ D +++P D V G DI+ F W A ++ Sbjct: 444 DPD-VLDTWFSSALWPFSTMGWPDTDSPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 498 Query: 283 NLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 L K HG + +G K+SKSLGN IDP++VIE+ G DALR+FL+ G Sbjct: 499 GLHFTGERPFKYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 558 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395 +D + ++ N N I N +SR V M L D + P P F SD+ + + + Sbjct: 559 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLEKPQQPDPSTFDLSDKWLFAQLN 615 Query: 396 RVLQEI 401 ++++ Sbjct: 616 ETIKQV 621 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 41 SIVIPPPNVTGKLHMGHAWDTTLQDIVIREKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 100 Query: 64 NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ KV F + M LD S + F T +K ++ R Sbjct: 101 KEGISRYDLGRDKFVQKVWEWKDEFAKTIHSQWAKMGLSLDYSRERF--TLDKGLNEAVR 158 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +G IY+G Y W A + + +++ G +Y+ ++ Sbjct: 159 KVFVELYKQGLIYRGEYIVNWDPQARTALSDIEVIHEDDKGAFYHVKY 206 >gi|239631662|ref|ZP_04674693.1| valyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526127|gb|EEQ65128.1| valyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 883 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 15/186 (8%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 DP ++ W + +T G+ D +++P D V G DI+ F W A ++ Sbjct: 447 DPD-VLDTWFSSALWPFSTMGWPDTDSPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 501 Query: 283 NLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 L K HG + +G K+SKSLGN IDP++VIE+ G DALR+FL+ G Sbjct: 502 GLHFTGERPFKYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 561 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395 +D + ++ N N I N +SR V M L D + P P F SD+ + + + Sbjct: 562 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLEKPQQPDPSTFDLSDKWLFAQLN 618 Query: 396 RVLQEI 401 ++++ Sbjct: 619 ETIKQV 624 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 44 SIVIPPPNVTGKLHMGHAWDTTLQDIVIREKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 103 Query: 64 NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ KV F + M LD S + F T +K ++ R Sbjct: 104 KEGISRYDLGRDKFVQKVWEWKDEFAKTIHSQWAKMGLSLDYSRERF--TLDKGLNEAVR 161 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +G IY+G Y W A + + +++ G +Y+ ++ Sbjct: 162 KVFVELYKQGLIYRGEYIVNWDPQARTALSDIEVIHEDDKGAFYHVKY 209 >gi|116494743|ref|YP_806477.1| valyl-tRNA synthetase [Lactobacillus casei ATCC 334] gi|191638254|ref|YP_001987420.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Lactobacillus casei BL23] gi|301066302|ref|YP_003788325.1| Valyl-tRNA synthetase [Lactobacillus casei str. Zhang] gi|116104893|gb|ABJ70035.1| valyl-tRNA synthetase [Lactobacillus casei ATCC 334] gi|190712556|emb|CAQ66562.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Lactobacillus casei BL23] gi|300438709|gb|ADK18475.1| Valyl-tRNA synthetase [Lactobacillus casei str. Zhang] Length = 880 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 15/186 (8%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 DP ++ W + +T G+ D +++P D V G DI+ F W A ++ Sbjct: 444 DPD-VLDTWFSSALWPFSTMGWPDTDSPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 498 Query: 283 NLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 L K HG + +G K+SKSLGN IDP++VIE+ G DALR+FL+ G Sbjct: 499 GLHFTGERPFKYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 558 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395 +D + ++ N N I N +SR V M L D + P P F SD+ + + + Sbjct: 559 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLEKPQQPDPSTFDLSDKWLFAQLN 615 Query: 396 RVLQEI 401 ++++ Sbjct: 616 ETIKQV 621 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 41 SIVIPPPNVTGKLHMGHAWDTTLQDIVIREKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 100 Query: 64 NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ KV F + M LD S + F T +K ++ R Sbjct: 101 KEGISRYDLGRDKFVQKVWEWKDEFAKTIHSQWAKMGLSLDYSRERF--TLDKGLNEAVR 158 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +G IY+G Y W A + + +++ G +Y+ ++ Sbjct: 159 KVFVELYKQGLIYRGEYIVNWDPQARTALSDIEVIHEDDKGAFYHVKY 206 >gi|256842870|ref|ZP_05548358.1| valyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|262045836|ref|ZP_06018800.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] gi|293381704|ref|ZP_06627685.1| valyl-tRNA synthetase [Lactobacillus crispatus 214-1] gi|312977611|ref|ZP_07789358.1| valine--tRNA ligase [Lactobacillus crispatus CTV-05] gi|256614290|gb|EEU19491.1| valyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|260573795|gb|EEX30351.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] gi|290921751|gb|EFD98772.1| valyl-tRNA synthetase [Lactobacillus crispatus 214-1] gi|310895350|gb|EFQ44417.1| valine--tRNA ligase [Lactobacillus crispatus CTV-05] Length = 879 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 41/269 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+L ++ + ER + + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLENQKTDGKVNFVPERFEQTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D +++P + Sbjct: 419 NKKTGETYVGEETPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTNAEDFKRYFPTNA 477 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314 V G DI+ F W + ++ +L K + +LH +G K+SKSLGN +DP+ Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK--D 372 +V+++ G DALR+FL+ A G+D YD L N N I N SR V M L Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPADA 590 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F SD I + + E+ Sbjct: 591 KPAHMPDASKFDLSDRWIFDRLNHTVSEV 619 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L RF R+ G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98 Query: 64 NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G + + FV Q + M LD S + F T +K + Sbjct: 99 KQGKDRHQMGREAFVKQVWDWKDEYASIIKGQWAKMGLSLDYSRERF--TLDKGLSKAVK 156 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ ++G IY+G Y W A + + ++K G +Y+ ++ Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDDKGAFYHIKY 204 >gi|325956486|ref|YP_004291898.1| valyl-tRNA synthetase [Lactobacillus acidophilus 30SC] gi|325333051|gb|ADZ06959.1| valyl-tRNA synthetase [Lactobacillus acidophilus 30SC] Length = 879 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 41/269 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+L ++ + ER + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLENQKTDGKVNFVPERFEGTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D +++P + Sbjct: 419 NKKTGETYVGVDAPKDAENWEQDPD-VLDTWFSSALWPFSTLGWPDTDSEDFKRYFPTNA 477 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314 V G DI+ F W + ++ +L K + +LH +G K+SKSLGN +DP+ Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372 +V+++ G DALR+FL+ A G+D YD L N N I N SR V M L + Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPENA 590 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F SD I + + E+ Sbjct: 591 KPAHMPEVSKFDLSDRWIFDRLNHTVSEV 619 Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L RF R+ G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98 Query: 64 NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G + + FV Q + M LD S + F T +K + Sbjct: 99 KQGKDRHQMGREAFVKQVWDWKDEYAAIIKGQWAKMGLSLDYSRERF--TLDKGLSKAVK 156 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ ++G IY+G Y W A + + ++K G +Y+ ++ Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDDKGAFYHIKY 204 >gi|325295640|ref|YP_004282154.1| Valyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066088|gb|ADY74095.1| Valyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 875 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 72/259 (27%), Positives = 125/259 (48%), Gaps = 19/259 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + T G+ D K F+P DL V G DI+ F W + ++ Sbjct: 448 VLDTWFSSAMWPFGTLGWPKRTDDLKV-FYPTDLLVTGFDIIFF----WVSRMMMMGYYF 502 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K+ V+ H + KG+K+SK+ GNVIDP+E++E+ G D LR+ L A G+D Sbjct: 503 MKEKPFSDVYVHALVRDEKGQKMSKTKGNVIDPLEMVEKYGADTLRFTLAALAAQGRDIR 562 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + ++ + AN I N ++R + L++ + + ++ D+ ILS S+ ++ Sbjct: 563 LSEKIIEGYRH--FANKIWN-IARFIFSALENVE--MKEAVSYAPEDKWILSKLSKTVEI 617 Query: 401 IRENMQNQLIHRALAQVIS-LVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 + + ++N + A + L SE D Y + K K T ++ TVL+V + V+R Sbjct: 618 VDKELENYRFNDAAKAIYQFLWSEFADWYIEFSKQRVYKGTEEEK-RTVLHVLLTVLRDA 676 Query: 459 AILLQAFVPKLANKIFDIL 477 LL +P L +I+ L Sbjct: 677 MKLLHPIMPFLTEEIYQKL 695 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Query: 5 EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 EK S + PN H+GHA + D++ R+ R+ G +V + GTD G Sbjct: 36 EKPKFSVVLPPPNVTGVLHVGHALNSTLQDIICRWKRMKGFEVCWIPGTDHAG 88 >gi|324328361|gb|ADY23621.1| valyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 881 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + +P N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +EVIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T ++ D Sbjct: 101 LREEGMSRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|229141196|ref|ZP_04269735.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|228642237|gb|EEK98529.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST26] Length = 867 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 467 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +EVIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 524 MEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686 Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T ++ D Sbjct: 87 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 146 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194 >gi|269865220|ref|XP_002651848.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348] gi|220063768|gb|EED42209.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348] Length = 286 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 40/267 (14%) Query: 5 EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +K+++++A+ Y N QPH+G+ ++ ADV +RF R G DV++ +GTDE+G I A+ Sbjct: 10 KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD----- 118 T + V +N +++ D ++ +D F T +HH+ + ++ K D D Sbjct: 70 KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIFLKTIDHFDEKEIN 129 Query: 119 ---------------IYKGCYSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPVQ 158 I C G + D+ Y+ D + + + + + P Q Sbjct: 130 QMFCPKCKQFLADRYIEGECACGATTHGDQCDTCGRYHEDSQ--ELTNFRCSICKTTP-Q 186 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWG 217 + FF L ++L Y+++ R +++K L ++RK WG Sbjct: 187 IKTTKQLFFNL----NELQHYFQTMDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWG 242 Query: 218 IKIP----DDPQYIMYVWIDALTNYLT 240 + +P DD + YVW DA YL+ Sbjct: 243 VPVPLKEYDDK--VFYVWYDAPIGYLS 267 >gi|168333858|ref|ZP_02692101.1| valyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B'] Length = 877 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 108/229 (47%), Gaps = 13/229 (5%) Query: 253 AKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGN 309 A F+P + V G DI+ F + + +P K V HG I +G K+SKSLGN Sbjct: 470 AHFYPTSVLVTGYDIIFFWVVRMVFSGIEQMGEVPF-KDVLIHGLIRDSEGRKMSKSLGN 528 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 IDP++VI++ G DALR LV A G D FY + + N + N + N +R + M Sbjct: 529 GIDPLDVIKQYGADALRLTLVTGNAPGNDMRFYFE---RVEGNRNFLNKLWN-ATRFILM 584 Query: 369 ILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425 ++ D + P T +D+ ILS + + + EN+ + A+ +V E D Sbjct: 585 NCENEDIDLCTMPKNLTTTDKWILSKANNLTTIVTENLDKYELGMAVGKVYDFAWEEFCD 644 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 Y + KP + R + LY V+ + +L F+P + +IF Sbjct: 645 WYIEMVKPRLYDNDDLTRPAA-LYTLKTVMIDILKMLHPFIPFVTEEIF 692 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 39/198 (19%), Positives = 77/198 (38%), Gaps = 43/198 (21%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73 PN Q H+GHA + + D+L R+ R+ G + L+ GTD IA + + + Sbjct: 43 PNITGQLHMGHALDNTLQDILTRYKRMXGYNTLWMPGTDH--ASIATEVKIVNKLKEEGI 100 Query: 74 DQN----------------------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111 D+N ++ R + D + F T + ++ Sbjct: 101 DKNDLGRDEFLKRAWQWKDEYGGLITQQLRKLGSSCDWDRERF--TMDAGLSAAVEAVFI 158 Query: 112 KISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170 K+ +KG IYKG W + + + + +++ +G +Y+ + V Sbjct: 159 KLYEKGYIYKGSRIINWCPVCKTSISDAEVIHEEREGNFYHLNYKIVG------------ 206 Query: 171 AYQDKLLSYYESHPEFIL 188 D+++ + + PE +L Sbjct: 207 --SDEVIRFATTRPETLL 222 >gi|227877308|ref|ZP_03995381.1| valine--tRNA ligase [Lactobacillus crispatus JV-V01] gi|256848756|ref|ZP_05554190.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|227863164|gb|EEJ70610.1| valine--tRNA ligase [Lactobacillus crispatus JV-V01] gi|256714295|gb|EEU29282.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] Length = 879 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 41/269 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+L ++ + ER + + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLENQKTDGKVNFVPERFEQTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D +++P + Sbjct: 419 NKKTGETYVGEETPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTNAEDFKRYFPTNA 477 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314 V G DI+ F W + ++ +L K + +LH +G K+SKSLGN +DP+ Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK--D 372 +V+++ G DALR+FL+ A G+D YD L N N I N SR V M L Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPADA 590 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F SD I + + E+ Sbjct: 591 KPAHMPDASKFDLSDRWIFDRLNHTVSEV 619 Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L RF R+ G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98 Query: 64 NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G + + FV Q + M LD S + F T +K + Sbjct: 99 KQGKDRHQMGREAFVKQVWDWKDEYASIIKGQWAKMGLSLDYSRERF--TLDKGLSKAVK 156 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ ++G IY+G Y W A + + ++K G +Y+ ++ Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDDKGAFYHIKY 204 >gi|326484075|gb|EGE08085.1| leucyl-tRNA synthetase [Trichophyton equinum CBS 127.97] Length = 975 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y+ YP+ H+GH I+DVLARF R+ G DVL G D G AA Sbjct: 75 KEKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKRMKGYDVLHPMGWDAFGLPAENAAI 134 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+ + + QN N ++ L I + D + T + + L+ + +KG Y+ Sbjct: 135 ERGIHPEGWTKQNIANMKNQLKDLGIRFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLAYQ 194 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177 Y D+ +++V A+ V+ E + +FFR++A+++ LL Sbjct: 195 AEAVVNYDPVDKTVLANEQVDSNGCSWRSGAK---VEKRELKQWFFRITAFKEALLKDLD 251 Query: 178 SYYESHPEFILPIER 192 S S P+ IL ++R Sbjct: 252 SLSGSWPDRILTMQR 266 Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust. Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 15/190 (7%) Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD---GLKK------RVN 351 EK+SKS N +DP IE G DA R ++ + +D+ G+++ + Sbjct: 673 EKMSKSKYNGVDPNTCIENYGADATRAHVLFSAPVSEVLEWDETKIVGIQRWFSRIWKAV 732 Query: 352 ADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410 D N + S L + M +P G +E++ ++L + + + + ++ Sbjct: 733 EDTGNSLKRANFASAPGALSSLNDMALPPLGKLSETESNLLLMTNNTISSVSYCLEKN-- 790 Query: 411 HRALAQVIS-LVSEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEV-IRQLAILLQAFVP 467 L VIS L+ + P E K +P S T LY T+ + + L +L P Sbjct: 791 QYGLNTVISDLIKLTNTIAAVPLPGESSKPSPSAQSITQLYTTLYISLNSLLRMLAPIAP 850 Query: 468 KLANKIFDIL 477 A++ +++L Sbjct: 851 AFASECWEVL 860 >gi|47566648|ref|ZP_00237470.1| valyl-tRNA synthetase [Bacillus cereus G9241] gi|229158076|ref|ZP_04286146.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|47556678|gb|EAL15010.1| valyl-tRNA synthetase [Bacillus cereus G9241] gi|228625395|gb|EEK82152.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 4342] Length = 881 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +EVIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T ++ D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|42783595|ref|NP_980842.1| valyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|81409029|sp|Q72ZW8|SYV_BACC1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|42739524|gb|AAS43450.1| valyl-tRNA synthetase [Bacillus cereus ATCC 10987] Length = 881 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +EVIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T ++ D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|320451519|ref|YP_004203615.1| leucyl-tRNA synthetase [Thermus scotoductus SA-01] gi|320151688|gb|ADW23066.1| leucyl-tRNA synthetase [Thermus scotoductus SA-01] Length = 883 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 13/211 (6%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K Y+ YP+ H+GH + DVLARF ++ G +VL G D G AA Sbjct: 39 KQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRKVQGYEVLHPMGWDAFGLPAENAALKF 98 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + + +N R ++ +++ I Y D + T E ++ + ++ K+ +KG Y+ Sbjct: 99 GLHPRDWTYENIRQAKESLELMGILYDWDREVTTCEPDYYRFNQWIFLKMWEKGLAYRAK 158 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES- 182 + R + +++V +G+ + + PV+ E E ++ R++AY ++LL E Sbjct: 159 GLVNWCPRCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAERLLEDLEGL 215 Query: 183 -HPEFILPIER----RNE--VISFVKSGLKD 206 PE + ++R R+E I F GLK+ Sbjct: 216 DWPEKVKAMQRAWIGRSEGAEIEFPVEGLKE 246 >gi|257470691|ref|ZP_05634781.1| leucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] gi|317064897|ref|ZP_07929382.1| leucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] gi|313690573|gb|EFS27408.1| leucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] Length = 869 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 11/196 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + YP+ + H+GHA I DV++R+ R+ G +VL G D G AA Sbjct: 32 KENYYVLEMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLHPMGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120 G V+ N N + +L SYD I + ++ + ++K++ +KG IY Sbjct: 92 QNGAHPAVWTKSNIENMKRQLKMLGFSYDWEREIASYTPEYYRWNQWIFKRLYEKGLIYK 151 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K W + N+ + DG+ + V E E +FF+++ Y D+LL + Sbjct: 152 KKSLVNWCPDCNTVLANE----QVEDGKCWRHSKTSVIQKELEQWFFKITDYADELLEGH 207 Query: 181 ----ESHPEFILPIER 192 + PE +L +++ Sbjct: 208 KEIKDGWPEKVLTMQK 223 Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 89/188 (47%), Gaps = 27/188 (14%) Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 ++ K EK+SKS N +DP E++E+ G D R F++ K+ ++++GL Sbjct: 615 LISKIEKMSKSKNNGVDPEEMVEKYGADTTRLFIMFAAPPEKELEWNENGLA-------- 666 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFT---ESDESILSVCSRVLQEIRENMQNQL-IH 411 G +++ ++++ + M T D++++ ++ ++++ E+++N + Sbjct: 667 -GAYRFLTKIWRLVMEHKENMEFGEINLTVVSREDKALIIKLNQTIKKVTESIENDYHFN 725 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA----STVLYVTVEVIRQLAILLQAFVP 467 ++A + L++E + KTN A S + EV+R + ++L F P Sbjct: 726 TSIAATMELINETQDF----------KTNIIEAGKSTSESKKIFGEVVRNIILMLSPFTP 775 Query: 468 KLANKIFD 475 + +++ Sbjct: 776 HFCDDLWE 783 >gi|229169200|ref|ZP_04296914.1| Valyl-tRNA synthetase [Bacillus cereus AH621] gi|228614266|gb|EEK71377.1| Valyl-tRNA synthetase [Bacillus cereus AH621] Length = 881 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 85/349 (24%), Positives = 148/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K + + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAVELQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + KF+ D Sbjct: 422 WYHKETGEVYVGTEAPADLENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKKFYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+RYFL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D + T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEVAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEG 99 >gi|255082165|ref|XP_002508301.1| predicted protein [Micromonas sp. RCC299] gi|226523577|gb|ACO69559.1| predicted protein [Micromonas sp. RCC299] Length = 941 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 52/153 (33%), Positives = 76/153 (49%), Gaps = 10/153 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ + AKF+P + G DIL F + ++ ++ L Sbjct: 487 VLDTWFSSGLWPFSTLGWPNEEAADLAKFFPTQVMETGHDILFFWVARMVMMSYGMTGKL 546 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P VF HG + KG K+SKSLGNV+DP+ VI+E G DALR+ L A G+D + Sbjct: 547 PF-HTVFLHGLVRDEKGRKMSKSLGNVVDPLNVIDEQGCDALRFTLATGTAAGQDLNLNM 605 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 D L N + N I N S +L +GM Sbjct: 606 DRLAS--NRNFTNKIWN----SGKFVLYSLEGM 632 >gi|327183314|gb|AEA31761.1| valyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118] Length = 879 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 41/269 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+L ++ + ER + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLENQKTAGKVNFVPERFEGTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D +++P + Sbjct: 419 NKKTGETYVGVDAPKDAENWEQDPD-VLDTWFSSALWPFSTLGWPDTDSEDFKRYFPTNA 477 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314 V G DI+ F W + ++ +L K + +LH +G K+SKSLGN +DP+ Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372 +V+++ G DALR+FL+ A G+D YD L N N I N SR V M L + Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPEDA 590 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F SD I + + E+ Sbjct: 591 KPAHMPEVSKFDLSDRWIFDRLNHTVSEV 619 Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L RF R+ G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98 Query: 64 NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G + + FV Q + M LD S + F T +K + Sbjct: 99 KQGKDRHQMGREAFVKQVWDWKDEYAAIIKGQWAKMGLSLDYSRERF--TLDKGLSKAVK 156 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ ++G IY+G Y W A + + ++K G +Y+ ++ Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDDKGAFYHIKY 204 >gi|315038034|ref|YP_004031602.1| valyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] gi|312276167|gb|ADQ58807.1| valyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] Length = 879 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 41/269 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+L ++ + ER + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLENQKTAGKVNFVPERFEGTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D +++P + Sbjct: 419 NKKTGETYVGVDAPKDAENWEQDPD-VLDTWFSSALWPFSTLGWPDTDSEDFKRYFPTNA 477 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314 V G DI+ F W + ++ +L K + +LH +G K+SKSLGN +DP+ Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372 +V+++ G DALR+FL+ A G+D YD L N N I N SR V M L + Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPEDA 590 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F SD I + + E+ Sbjct: 591 KPAHMPEVSKFDLSDRWIFDRLNHTVSEV 619 Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L RF R+ G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98 Query: 64 NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G + + FV Q + M LD S + F T +K + Sbjct: 99 KQGKDRHQMGREAFVKQVWDWKDEYAAIIKGQWAKMGLSLDYSRERF--TLDKGLSKAVK 156 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ ++G IY+G Y W A + + ++K G +Y+ ++ Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDDKGAFYHIKY 204 >gi|319937416|ref|ZP_08011823.1| valyl-tRNA synthetase [Coprobacillus sp. 29_1] gi|319807782|gb|EFW04375.1| valyl-tRNA synthetase [Coprobacillus sp. 29_1] Length = 876 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 72/271 (26%), Positives = 120/271 (44%), Gaps = 23/271 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P D V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPNTESEMFKRYFPTDTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K V HG I +G K+SKSLGN +DP++VI+E G D LR+FL A G D Sbjct: 499 THERPFKDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDEYGADTLRFFLTTNSAPGMDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTE---SDESILSVCSR 396 Y + L+ N N I N S +L + D M +FT SD+ IL+ + Sbjct: 559 YIPEKLEASWN--FINKIWN----SARFVLMNIDEDMKYEDLSFTYLNLSDQWILNRLND 612 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 V++ + ENM +++ + + + Y + K L N V V Sbjct: 613 VIRSVDENMDKFEFVNVGSELYNFIWDDFCSWYIELSKA-HLNSDNDTEKRATQETLVYV 671 Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRC 485 + + LL F+P + +I+ + +E+ C Sbjct: 672 LNAIVRLLHPFMPFVTEEIYQSIPHLEESIC 702 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 31/175 (17%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R+ R+ G D L+ G D G A A V Sbjct: 38 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRYKRMQGFDALWLPGMDHAG-----IATQAKV 92 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 ++ D SR F + A Y IR T ++ + Sbjct: 93 EARMREDGLSRYDLGREKFLEKAWSWKEEYASIIRNQWEKLGLSLDYSKERFTLDEGLSE 152 Query: 105 TCRILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158 + ++ + +KG IY+G W ++ A N + ++K +G Y ++ V+ Sbjct: 153 AVKTVFITLYEKGLIYQGERIINWDPVQRTALSNIEVIHKEIEGHMYYFKYKVVE 207 >gi|206975955|ref|ZP_03236865.1| valyl-tRNA synthetase [Bacillus cereus H3081.97] gi|217961947|ref|YP_002340517.1| valyl-tRNA synthetase [Bacillus cereus AH187] gi|222097904|ref|YP_002531961.1| valyl-tRNA synthetase [Bacillus cereus Q1] gi|206745707|gb|EDZ57104.1| valyl-tRNA synthetase [Bacillus cereus H3081.97] gi|217067118|gb|ACJ81368.1| valyl-tRNA synthetase [Bacillus cereus AH187] gi|221241962|gb|ACM14672.1| valyl-tRNA synthetase [Bacillus cereus Q1] Length = 881 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +EVIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T ++ D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|85114097|ref|XP_964638.1| hypothetical protein NCU07451 [Neurospora crassa OR74A] gi|28926427|gb|EAA35402.1| hypothetical protein NCU07451 [Neurospora crassa OR74A] Length = 663 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 76/304 (25%), Positives = 131/304 (43%), Gaps = 32/304 (10%) Query: 198 SFVKSGLKDLSLSRKTFDWGIKIP------DDPQY---IMYVWIDALTNYLT-TTGYLD- 246 S++ +GLK ++R WG+ IP D +Y + YVW DA Y + T Y D Sbjct: 251 SWINNGLKPRGITRD-LKWGVPIPKGLEGLSDEEYANKVFYVWFDACIGYASITKCYTDE 309 Query: 247 -NPDGSKAKFW---PADL---HVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFIL 297 N +G + W P ++ +GKD + FH I +P L + + + ++ Sbjct: 310 GNLEGRNWEKWWKNPDNVTLYQFMGKDNVPFHTIIFPGTQLGTKEKWTQVNHLSTTEYLN 369 Query: 298 HKGEKISKSLG-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 ++G K SKS G V + D RY+L+ D + + N DL Sbjct: 370 YEGGKFSKSKGVGVFGNNARDTGIDPDVWRYYLLSRRPESGDSEFKWEEFIDSNNNDLLK 429 Query: 357 GIGNLVSRSVSMILKDYDGMIP----TP-GAFTESDESILSVCSRVLQEIRENMQNQLIH 411 +GNL R V D +P TP + E E I +++L+E E ++ + Sbjct: 430 NLGNLCQRVVKFCQAKLDAKVPEYPKTPIASLDEYKEEI----NKLLKEYNEQVKGTKLR 485 Query: 412 RALAQVISLVSEVDRYF-DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 LA V+S+ + ++ D + +L P+R + V+ + ++ +A +L ++P A Sbjct: 486 AGLATVLSISAVGNKLLQDNKLSNQLLTEEPERCNAVINFALNLLHLIAGVLSPYMPGTA 545 Query: 471 NKIF 474 I Sbjct: 546 QSIL 549 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 1/100 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +E + I++A+ Y N PH+G+ ++ ADV ARF R GL L+ G+DE+G A Sbjct: 14 KENILITSALPYVNNVPHLGNIIGSVLSADVFARFCRARGLPTLYICGSDEYGTATETKA 73 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102 + GV + +D+ D IS+D F RT H Sbjct: 74 LSEGVDPATLCAKYHALHKDVYDWFRISFDKFGRTPTDEH 113 >gi|229087021|ref|ZP_04219175.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-44] gi|228696284|gb|EEL49115.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-44] Length = 881 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K + + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAVELQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + D +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNENDEDFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +EVIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ + LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDRTMRLLHPFMPFVTEKIWQHL 700 Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 25/173 (14%) Query: 5 EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 EK + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A Sbjct: 38 EKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQA 95 Query: 63 QNAGVTTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRH 102 + G + + D F + A Y IR T ++ Sbjct: 96 KVEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIREQWGKVGLGLDYTRERFTLDEGL 155 Query: 103 HDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 D ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 156 SDAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|154249040|ref|YP_001409865.1| valyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] gi|171769323|sp|A7HJX5|SYV_FERNB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|154152976|gb|ABS60208.1| valyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] Length = 867 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 28/269 (10%) Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285 ++ W + +T G+ + PD + ++P D+ V G DI+ F W A ++ Sbjct: 445 VLDTWFSSALWPFSTMGWPEKTPDLER--YYPTDVLVTGFDIIFF----WVARMIMMGYE 498 Query: 286 LP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 K+V+ H + K G K+SKSLGN IDP+EVI+E G D +R+ L A G+D Sbjct: 499 FMDEKPFKEVYIHQLVRDKYGRKMSKSLGNGIDPLEVIDEYGADPMRFTLAILAAQGRDL 558 Query: 340 FYDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396 D D KK AN I N +R V M L+D++ + SD+ ILS + Sbjct: 559 KLDVRFFDTYKK-----FANKIWN-ATRFVLMNLEDFEKVDIKLSKLKLSDKWILSRLQK 612 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 +Q+I E + + + A ++ + + D Y +A K + + V V V V Sbjct: 613 TIQKISEALDSYDFNIAANEIYNFFWDELCDWYIEAVK----NRLKTEERKVVQNVLVYV 668 Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN 483 + LL F+P L +++ L + E+ Sbjct: 669 LDMSLRLLHPFMPFLTEELWTKLPTSGES 697 Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 35/173 (20%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA + I D+L+R+ R+ G DVL+ G D G A + Sbjct: 36 SIVIPPPNITGKIHMGHALNITIQDILSRYKRMKGFDVLWLPGEDHAGIATQTAVER--- 92 Query: 68 TTKVFVDQNSRNFRDMA--DVLDISYD--------------------DFIR---TTEKRH 102 ++ ++ RD + + L+I ++ D+ R T ++ Sbjct: 93 ----YLSTQGKSRRDFSRDEFLNIVWNWANKYRQEIKNQIMSIGASVDWTRERFTLDEGL 148 Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 R ++ + KG IYKG Y + R +D+EV Y +G Y+ ++ Sbjct: 149 SKAVRKVFVDMYKKGLIYKGKYIVNWCHRCGTVLSDEEVDYHEEEGALYHIKY 201 >gi|110004402|emb|CAK98740.1| probable valyl-trna synthetase protein [Spiroplasma citri] Length = 888 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 91/370 (24%), Positives = 162/370 (43%), Gaps = 82/370 (22%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ + +K++ + S + R N + ++D +SR+ + WG +IP Sbjct: 363 WFVKMEYFAEKIIKFQSSTNKIQFYPPRFNITLINWMKNVQDWCISRQLW-WGHQIPAWY 421 Query: 222 --DDPQYI-------------------MYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD 259 DD I + W + +T+ G+ N D + ++P + Sbjct: 422 YKDDSTKIHVGLTPPDNSKNWIQDADVLDTWFSSALWPMTSLGW--NWDKKLFQHYFPTN 479 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDP 313 + V G DI+ F W + ++ +L K+ V HG I +G K+SKSLGN +DP Sbjct: 480 VLVTGYDIIFF----WVSRMMFESLEFTKEKPFNDVLIHGLIRDEEGRKMSKSLGNGVDP 535 Query: 314 IEVIEEVGVDALRYFLVREIACGKD------------GFYDKDGLKKR-VNADLANGIGN 360 ++VI+E G D LRYFLV A G+D F +K R V +L N Sbjct: 536 MDVIKEYGADTLRYFLVTNSAPGQDLRFSLEKVNSAWNFINKLWNAARYVEMNLTNNFKP 595 Query: 361 LVSRSV---SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ---LIHRAL 414 LV+ + +++L + I D+ ILS ++ + +++ NM+ L+ + L Sbjct: 596 LVNFEIEIKNLLLNHQENAI---------DQWILSELAKTITKVQTNMEKYEFVLVGKDL 646 Query: 415 AQVISLVSEVDRYFDAQKPW--ELKKTN-PDRASTVLYVTVE----VIRQLAILLQAFVP 467 D ++ W EL K N +T+ V+ + V++Q+ I+L F+P Sbjct: 647 ---------YDFVWNKLCSWYIELTKVNLQSNNATIKMVSTQTLFYVLKQILIMLHPFIP 697 Query: 468 KLANKIFDIL 477 + +I+ L Sbjct: 698 FVTEEIYQKL 707 Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 26/165 (15%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAG 66 S I PN + H+GHA++ + D++ R+ +L G D L+ G D G AK + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDLIIRYKKLLGFDTLYLPGMDHAGIATQAKVEERLC 99 Query: 67 VTTKV---------FVDQNSRNFRDMADV-----------LDISYDDFIRTTEKRHHDTC 106 VT + F++Q + A++ LD S + F T Sbjct: 100 VTKNILRHDLGREKFIEQVWAWKEEYAEIIREQWAKLGLALDYSREQF--TLNNNLSAAV 157 Query: 107 RILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYY 150 + ++ + KG IY+G W ++ A N + +Y+ G+ Y Sbjct: 158 QKVFIDLYQKGLIYRGKRIISWDPVQKTALSNIEVIYQEQQGKMY 202 >gi|83951105|ref|ZP_00959838.1| valyl-tRNA synthetase [Roseovarius nubinhibens ISM] gi|83839004|gb|EAP78300.1| valyl-tRNA synthetase [Roseovarius nubinhibens ISM] Length = 964 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 19/269 (7%) Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276 G+ + DP ++ W + + T G+ + + K +++P V G+DIL F W Sbjct: 526 GVTLTRDPD-VLDTWFSSGLWPIGTLGWPEETEEYK-RYFPTSTLVTGQDILFF----WV 579 Query: 277 AFLLSANLPLPKKV-----FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 A ++ L + +V + HG + KG+K+SKS GNVIDP+E+I+E G DALR+ Sbjct: 580 ARMMMMQLAVVDQVPFDTVYLHGLVRDAKGKKMSKSTGNVIDPLEIIDEYGADALRFTNA 639 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 + G G D + + + N + DG IPTP A + I Sbjct: 640 AMASLG--GVLKLDMQRIAGYRNFGTKLWNAARFAEMNGATGSDGQIPTPEATV--NRWI 695 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVL 448 + ++V Q + E ++ + A + V D Y + KP L + +A T Sbjct: 696 IGETAKVRQVVDEALETFRFNDAAQALYGFVWGKVCDWYVEFSKPLLLDGDDATKAETQA 755 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + VI Q ILL +P + +++ L Sbjct: 756 TMAW-VIDQCLILLHPIMPFITEELWGTL 783 Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 15/88 (17%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA+ + D+L R+ R+ G D L+ GTD +AG+ Sbjct: 40 SIMIPPPNVTGVLHMGHAFNNTLQDILIRWKRMQGFDTLWQPGTD-----------HAGI 88 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFI 95 T++ V++ ++ D S D+F+ Sbjct: 89 ATQMVVERELA--KEGKKRTDFSRDEFL 114 >gi|228991196|ref|ZP_04151154.1| Isoleucyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442] gi|228768420|gb|EEM17025.1| Isoleucyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442] Length = 1033 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 72/256 (28%), Positives = 128/256 (50%), Gaps = 15/256 (5%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ A L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGVDQTRGWFYSLLAVAALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 +P K+V S G +L +G+K+SKS GN +DP+E++E+ G DALR+ L+ + A + Sbjct: 572 VPY-KRVLSLGHVLDEQGQKMSKSKGNALDPVELVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 + +++ + L + + N+ S V L Y+ T+ DE +LS ++++ Sbjct: 631 ERTVQE-AKSKLVDTLVNVYSFYVLYTNLDKYNPKEKYEVKRTKLDEWVLSRLHSTVKQV 689 Query: 402 RENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIRQ 457 R + A ++ LV EV ++ + WE NP++A+ Y T+ EV+ Sbjct: 690 RNALDEYQFTNAAREIAVLVDEVSNWYVRRSRNRFWE-SGMNPEKAAA--YETLHEVLVT 746 Query: 458 LAILLQAFVPKLANKI 473 L+ LL F P +A I Sbjct: 747 LSKLLAPFTPFVAEDI 762 Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G VL G D HG Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMTGYKVLRKAGWDTHG 88 >gi|229085157|ref|ZP_04217404.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-44] gi|228698138|gb|EEL50876.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-44] Length = 1035 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 134/259 (51%), Gaps = 21/259 (8%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGVDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 +P K+V S G +L +G+K+SKS GN +DP+E++E+ G DALR+ L+ + A + Sbjct: 572 VPY-KRVLSLGHVLDEQGQKMSKSKGNALDPVELVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF----TESDESILSVCSRVL 398 + +++ + L + + N+ S V + + DG P G + T+ DE +LS Sbjct: 631 ERTVQE-AKSKLVDTLVNVYSFYV--LYANLDGYDPK-GKYEVKRTKLDEWVLSRLHSTT 686 Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EV 454 +++R +++ A ++ +LV E+ ++ + WE NP++A+ Y T+ EV Sbjct: 687 KKVRTALEDYQFTNAAREIAALVDELSNWYVRRSRNRFWE-SGMNPEKAAA--YETLHEV 743 Query: 455 IRQLAILLQAFVPKLANKI 473 + ++ LL F P +A I Sbjct: 744 LVTVSKLLAPFTPFVAEDI 762 Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G VL G D HG Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMTGYKVLRKAGWDTHG 88 >gi|157879483|pdb|1OBC|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed With A Post-Transfer Editing Substrate Analogue Length = 814 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 7/191 (3%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K Y+ YP+ H+GH + DVLARF R+ G +VL G D G AA Sbjct: 31 KQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAALKF 90 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 GV K + N R ++ ++ I Y D + T E ++ + ++ K+ +KG Y+ Sbjct: 91 GVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYRAK 150 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE-- 181 + + + +++V +G+ + + PV+ E E ++ R++AY ++LL E Sbjct: 151 GLVNWCPKCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLEGL 207 Query: 182 SHPEFILPIER 192 + PE + ++R Sbjct: 208 NWPEKVKAMQR 218 >gi|294783024|ref|ZP_06748348.1| valine--tRNA ligase [Fusobacterium sp. 1_1_41FAA] gi|294479902|gb|EFG27679.1| valine--tRNA ligase [Fusobacterium sp. 1_1_41FAA] Length = 887 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 94/402 (23%), Positives = 171/402 (42%), Gaps = 53/402 (13%) Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189 L+++A++ E A GQ Y Q ++ +F ++ +K L + ILP Sbjct: 326 LKEQAFFIKTEHLHHAVGQCYRCQ-TVIEPRVSPQWFVKMKPLAEKALEVVRNGEIKILP 384 Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------- 221 +R ++ ++D +SR+ + WG +IP Sbjct: 385 -KRMEKIYYNWLENIRDWCISRQIW-WGHRIPAWYGPDRHVFVAMDEAEAKEQAKKHYGH 442 Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYW 275 + ++ W + +T G+ P+ +K F+P + V G DI+ F Sbjct: 443 DVELSQEEDVLDTWFSSALWPFSTMGW---PEKTKELDLFYPTNTLVTGADIIFFWVARM 499 Query: 276 PAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 F + +P K VF HG + + G K+SKSLGN DP+++I+E GVDA+R+ ++ Sbjct: 500 IMFGMYELKKIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEFGVDAIRFSMIYNT 559 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESIL 391 + G+D + D L + + AN I N +R V M L+ +D + T + D+ I+ Sbjct: 560 SQGQDVHFSTDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWII 616 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL- 448 S + +++ + ++ + A V + D Y + K L N D+ + L Sbjct: 617 SRLNETAKDVEDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNDNEDKKISKLT 675 Query: 449 --YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488 Y+ ++ Q LL F+P + +I+ + V E Q Sbjct: 676 AQYMLWTILEQGLRLLHPFMPFITEEIWQKIKVDGETIMLQQ 717 >gi|227524312|ref|ZP_03954361.1| valyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290] gi|227088543|gb|EEI23855.1| valyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290] Length = 893 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 99/203 (48%), Gaps = 27/203 (13%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D+ D K +++P D V G DI+ F Sbjct: 444 GMEAPKDAENWEQDPDVLDTWFSSALWPFSTMGWPDDTDDMK-RYFPTDTLVTGYDIIFF 502 Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ +L K V HG I +G K+SKSLGN IDP++VI++ G DA Sbjct: 503 ----WVSRMIFQSLEFTHRRPFKDVLLHGLIRDSQGRKMSKSLGNGIDPMDVIDKYGADA 558 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380 LR+FL G+D + D + N N I N SR V M L DG+ +P Sbjct: 559 LRWFLSVGGTPGQDLKFSYDKMDSAWN--FINKIWN-ASRYVIMNL---DGIEKPKLPDK 612 Query: 381 GAFTESDESILSVCSRVLQEIRE 403 + SD+ ILS + + E+ E Sbjct: 613 SEWQLSDKWILSRLNTTISEVSE 635 >gi|183219675|ref|YP_001837671.1| valyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909811|ref|YP_001961366.1| valyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774487|gb|ABZ92788.1| Valine--tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778097|gb|ABZ96395.1| Valyl-tRNA synthetase (Valine--tRNA ligase; ValRS) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 896 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 150/334 (44%), Gaps = 35/334 (10%) Query: 158 QWME--EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 +WME + R + ++ +YY + + ++ E E IS + K +S+++ T Sbjct: 403 EWMENIRDWCISRQLWWGHRIPAYYAPNGDMVVA-ESLEEAISLFEK--KGISVTKDT-- 457 Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275 IK +D ++ W + + G+ + + K +++P + V G DI+ F W Sbjct: 458 --IKQDED---VLDTWFSSGLWPFSVFGWPEKTEELK-QYYPTSVLVTGFDIIFF----W 507 Query: 276 PAFLLSANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 A ++ L +KV HG + K G+K SKSLGNV+DP++++ + G D+ R+FL Sbjct: 508 VARMIMNGLKFMGDVPFQKVLIHGLVRDKDGKKFSKSLGNVVDPLDMMSKYGTDSFRFFL 567 Query: 330 VREIACGKDGFYDK---DGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTE 385 + GKD +D+ DG + N I N SR + M L +D+ + P + + Sbjct: 568 AAVLPEGKDILFDESRLDGYR-----SFCNKIWN-SSRFIFMNLPEDFSPIEPNLDSLED 621 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDR 443 +D IL ++L + L + V S D Y + K P+ Sbjct: 622 TDLWILHEFDQMLGRYEKAYSGYLFFEMANAIYDFVWGSFCDWYLELTKARVYGNVTPES 681 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A V V V+++ LL F+P + +I +L Sbjct: 682 AEKARQVLVSVLKKSLGLLHPFMPFITEEIHFLL 715 >gi|256027519|ref|ZP_05441353.1| leucyl-tRNA synthetase [Fusobacterium sp. D11] Length = 872 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + + YP+ + H+GHA I DV++R+ R+ G +VL G D G AA Sbjct: 45 KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 104 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G ++ N N + ++ SYD I + ++ + L+K++ +KG IYK Sbjct: 105 QNGTHPVIWTKSNIENMKRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 164 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + +++V DG + V E E +FF+++ Y D+LL +E Sbjct: 165 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 221 Query: 182 ----SHPEFILPIER 192 PE +L +++ Sbjct: 222 EIKDGWPEKVLTMQK 236 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 92/180 (51%), Gaps = 15/180 (8%) Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K EK+SKS N +DP E++++ G D R F++ K+ ++++GL + Sbjct: 621 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 678 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417 LV + ++ K D + ++ D+++L ++ ++++ + ++N + A+A Sbjct: 679 WRLVFENSELVKKSNDKI--DYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAAN 736 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + L++EV Y + N ++A+ +L T ++++ I+L FVP ++I++ L Sbjct: 737 MELINEVQTYVASS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 786 >gi|52141048|ref|YP_085781.1| valyl-tRNA synthetase [Bacillus cereus E33L] gi|81824177|sp|Q633Y6|SYV_BACCZ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|51974517|gb|AAU16067.1| valine--tRNA ligase (valyl-tRNA synthetase) [Bacillus cereus E33L] Length = 881 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAVALQQKDEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 +EVIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T ++ D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|325087332|gb|EGC40642.1| methionyl-tRNA synthetase [Ajellomyces capsulatus H88] Length = 512 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 90/395 (22%), Positives = 173/395 (43%), Gaps = 41/395 (10%) Query: 87 LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146 DI +D F RTT D + +++K+ + G + + + Y +E +Y D +G Sbjct: 38 FDIGFDIFGRTTTPLQTDITQDIFRKLYNNGFLKERMTTQLYC--EEHHYADA---RGDQ 92 Query: 147 GQYYNAQHNPVQWMEE----EGY----------FFRLSAYQDKLLSYYE-SHPEFILPIE 191 P+Q +G+ F L Q ++ Y++ + P Sbjct: 93 CDMCGQLLEPLQLKNPRCKIDGFAPITKDTKHIFLELDKLQPEVEDYFQKASTNGAWPNN 152 Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY---IMYVWIDALTNYLTTTG-YLDN 247 ++ ++++K GL+ S++R WG ++P P Y ++Y W DA Y++ T Y D Sbjct: 153 GKSITLAWLKEGLQPRSITRD-MKWGTQVPF-PGYEDKVIYSWFDACIGYVSITAKYTDQ 210 Query: 248 PDGSKAKFW--PADLHV---IGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKG 300 + K+W P D+ + IGKD + FH++ +PA + P K + + ++ ++G Sbjct: 211 WE----KWWRNPEDVQLYQFIGKDNVVFHSVIFPASQIGTRGPWTKVHHLSTTDYLTYEG 266 Query: 301 EKISKSLGNVIDPIEVIEEVG-VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 K SKS G + + G D RY+L+ D + D N+ L N +G Sbjct: 267 GKFSKSRGIGVFGDSAQQTGGSADVWRYYLLSRRPETGDTEFSWDSFISANNSILLNNLG 326 Query: 360 NLVSRSVSMI-LKDYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 N SR + + + Y+ ++P + E S E+ +R+L + E + + LA Sbjct: 327 NFASRVLKFVNSRFYNNIVPNWTRYHEPSFETWKEEINRLLTKYVEVLNTVKLRAGLATA 386 Query: 418 ISLVSEVDRYFDAQKPWE-LKKTNPDRASTVLYVT 451 + + + + + K + L ++ P + + V+ +T Sbjct: 387 LHISQQGNLFLQTNKLNDKLHESEPAKCTAVISLT 421 >gi|289765479|ref|ZP_06524857.1| leucyl-tRNA synthetase [Fusobacterium sp. D11] gi|289717034|gb|EFD81046.1| leucyl-tRNA synthetase [Fusobacterium sp. D11] Length = 859 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + + YP+ + H+GHA I DV++R+ R+ G +VL G D G AA Sbjct: 32 KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G ++ N N + ++ SYD I + ++ + L+K++ +KG IYK Sbjct: 92 QNGTHPVIWTKSNIENMKRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + +++V DG + V E E +FF+++ Y D+LL +E Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208 Query: 182 ----SHPEFILPIER 192 PE +L +++ Sbjct: 209 EIKDGWPEKVLTMQK 223 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 92/180 (51%), Gaps = 15/180 (8%) Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K EK+SKS N +DP E++++ G D R F++ K+ ++++GL + Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417 LV + ++ K D + ++ D+++L ++ ++++ + ++N + A+A Sbjct: 666 WRLVFENSELVKKSNDKI--DYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAAN 723 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + L++EV Y + N ++A+ +L T ++++ I+L FVP ++I++ L Sbjct: 724 MELINEVQTYVASS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 773 >gi|317132442|ref|YP_004091756.1| valyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] gi|315470421|gb|ADU27025.1| valyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] Length = 872 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 76/287 (26%), Positives = 126/287 (43%), Gaps = 38/287 (13%) Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 K G LS TFD W + +T G+ + A F+P + Sbjct: 437 KCGGTHLSQDEDTFD--------------TWFSSALWPFSTLGWPEKTP-ELAYFYPTSV 481 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314 V G DI+ F W A ++ + + + H ++H KG K+SKSLGN +DP+ Sbjct: 482 LVTGYDIIFF----WVARMIFSGIAQTGQTPFHTVLIHGLVRDAKGRKMSKSLGNGVDPL 537 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKD 372 EVI+ G DALR+ L A G D L +RV + + AN I N +R + M + Sbjct: 538 EVIKSSGADALRFTL----ATGNSPGNDTRFLPERVESSRNFANKIWN-AARFILMNISG 592 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDA 430 + +PT D+ ILS + +++++ EN++ + A+ ++ + S D Y + Sbjct: 593 SETGLPT--ELEIEDKWILSKLNTLIRDVTENLERFELGVAVQKLYDFLWDSFCDWYIEL 650 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K + + A+ V V V+ LL +P + +I+ L Sbjct: 651 SK--SRLQAGGENAAAACRVLVWVMEHTLRLLHPVMPFITEEIWQTL 695 Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTTK 70 H+GHA+E D+L RF R+ G + L+ GTD KI A G++ + Sbjct: 53 HMGHAFEDTQQDILIRFKRMQGFEALWLPGTDHASIATEAKIVAAMAKEGLSKQ 106 >gi|167755851|ref|ZP_02427978.1| hypothetical protein CLORAM_01368 [Clostridium ramosum DSM 1402] gi|167704790|gb|EDS19369.1| hypothetical protein CLORAM_01368 [Clostridium ramosum DSM 1402] Length = 873 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 29/274 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P + V G DI+ F W + ++ +L Sbjct: 444 VLDTWFSSALWPFSTLGWPNTDSELFKRYFPTNTLVTGYDIIFF----WVSRMIFQSLHF 499 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 ++ V HG I +G K+SKSLGN +DP++VI+E G D LR+FL A G D Sbjct: 500 TEERPFEHVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDEYGADTLRFFLTTNSAPGMDLR 559 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR-VLQ 399 Y + L+ N N I N S +L + D + F E L++C + +L Sbjct: 560 YIPEKLEASWN--FINKIWN----SARFVLMNIDDEM----KFEELSFDNLNLCDKWILN 609 Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRY-FDAQKPW-------ELKKTNPDRASTVLYVT 451 + E ++ I+ + +++ SE+ ++ +D W L TN L Sbjct: 610 RLNEVIREVDINMDKFEFVNVGSELYKFIWDDFCSWYIELTKVHLNSTNDTEKQASLNTL 669 Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 V V+ + +L F+P + +IF + +E+ C Sbjct: 670 VYVLNAIVKMLHPFMPFVTEEIFQAIPHLEESIC 703 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 24/146 (16%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R+ R+ G D L+ G D +AG+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRYKRMQGYDALWLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRILWKKISDKGDIYKGCY 124 T+ V+ R + D+ D F+ + ++ + R W+K+ D K + Sbjct: 88 ATQAKVEARMR--EEGISRYDLGRDGFLEKAWSWKEEYASIIRAQWEKLGLSLDYSKERF 145 Query: 125 S---GWYSLRDEAY---YNDDEVYKG 144 + G E + YN+ +Y+G Sbjct: 146 TLDDGLSEAVKEVFVKLYNEGLIYQG 171 >gi|237734819|ref|ZP_04565300.1| valyl-tRNA synthetase [Mollicutes bacterium D7] gi|229382147|gb|EEO32238.1| valyl-tRNA synthetase [Coprobacillus sp. D7] Length = 874 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 29/274 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P + V G DI+ F W + ++ +L Sbjct: 445 VLDTWFSSALWPFSTLGWPNTDSELFKRYFPTNTLVTGYDIIFF----WVSRMIFQSLHF 500 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 ++ V HG I +G K+SKSLGN +DP++VI+E G D LR+FL A G D Sbjct: 501 TEERPFEHVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDEYGADTLRFFLTTNSAPGMDLR 560 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR-VLQ 399 Y + L+ N N I N S +L + D + F E L++C + +L Sbjct: 561 YIPEKLEASWN--FINKIWN----SARFVLMNIDDEM----KFEELSFDNLNLCDKWILN 610 Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRY-FDAQKPW-------ELKKTNPDRASTVLYVT 451 + E ++ I+ + +++ SE+ ++ +D W L TN L Sbjct: 611 RLNEVIREVDINMDKFEFVNVGSELYKFIWDDFCSWYIELTKVHLNSTNDTEKQASLNTL 670 Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 V V+ + +L F+P + +IF + +E+ C Sbjct: 671 VYVLNAIVKMLHPFMPFVTEEIFQAIPHLEESIC 704 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 24/146 (16%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R+ R+ G D L+ G D +AG+ Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRYKRMQGYDALWLPGMD-----------HAGI 88 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRILWKKISDKGDIYKGCY 124 T+ V+ R + D+ D F+ + ++ + R W+K+ D K + Sbjct: 89 ATQAKVEARMR--EEGISRYDLGRDGFLEKAWSWKEEYASIIRAQWEKLGLSLDYSKERF 146 Query: 125 S---GWYSLRDEAY---YNDDEVYKG 144 + G E + YN+ +Y+G Sbjct: 147 TLDDGLSEAVKEVFVKLYNEGLIYQG 172 >gi|9971928|gb|AAG10490.1|AF279106_52 predicted leucyl-tRNA synthetase (leuS) [uncultured marine gamma proteobacterium EBAC31A08] Length = 804 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 95/194 (48%), Gaps = 10/194 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK Y + YP+ + H+GH I DV++R+ R++ +V G D G AA Sbjct: 31 REKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYKRMNNFNVFQPMGWDAFGLPAENAAI 90 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120 V+ K + +QN + + L + YD +RT E ++ ++++KK DKG +Y Sbjct: 91 ANKVSPKDWTNQNIEHMKQQLISLGLGYDWSKELRTCEPEYYKWEQLIFKKFYDKGLVYR 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K W + DE +++V G G AQ V+ E + +F +++ Y ++LL+ Sbjct: 151 KKSLVNWDPV-DETVLANEQVIDGK-GWRSGAQ---VEIKEIDQWFIKITDYAEELLTSL 205 Query: 181 ES--HPEFILPIER 192 + PE + ++R Sbjct: 206 DEVDWPENVKTMQR 219 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 10/101 (9%) Query: 239 LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKK 289 T++ D +K+W P DL++ G + H +Y F L+ N P KK Sbjct: 491 FTSSDNADEMFDKNSKYWLPVDLYIGGIEHAILHLLYSRFFHKALRDMDLVEGNEPF-KK 549 Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 + + G +L G K+SKS GN +DP IE+ G D +R +++ Sbjct: 550 LLTQGMVLKDGAKMSKSKGNTVDPQSYIEKYGADTVRLYMM 590 >gi|297588484|ref|ZP_06947127.1| valine--tRNA ligase [Finegoldia magna ATCC 53516] gi|297573857|gb|EFH92578.1| valine--tRNA ligase [Finegoldia magna ATCC 53516] Length = 872 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 87/352 (24%), Positives = 156/352 (44%), Gaps = 38/352 (10%) Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 H V+ + + +F ++ L Y++ +P ++++++ ++D +SR+ Sbjct: 349 HTTVEPLISKQWFVKMDKLAKLALDAYKNEEIRFIPKRFEKVYVNWLEN-IRDWCISRQL 407 Query: 214 FDWGIKIP----------------DDPQY------IMYVWIDALTNYLTTTGYLDNPDGS 251 + WG ++P DP+ + W + +T G+ + + Sbjct: 408 W-WGHRLPVYYHNETGEVVVARKNPDPEKYTQDPDTLDTWFSSALWPFSTLGWPNETEDL 466 Query: 252 KAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLG 308 K F+P ++ V G DI+ F I + + +P K V+ G + +G K+SKSLG Sbjct: 467 KY-FFPTNVLVTGYDIIFFWVIRMVFSSLYNLGEVPF-KDVYLTGLVKDSQGRKMSKSLG 524 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDG-FYDKDGLKKRVNADLANGIGNLVSRSVS 367 N IDPIEVI++ G DALR+ L+ G D FY + K N + N + N SR V Sbjct: 525 NGIDPIEVIDQYGADALRFALITGNTPGNDSRFYME---KVEANRNFCNKLWN-ASRFVF 580 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--D 425 M ++D I E D+ I+S + V+ E+ N+ I A ++ V D Sbjct: 581 MNVEDEVKNIDDVELQIE-DKWIISSLNDVIDEVSTNLNKYEIGIAAEKIYDFTWNVFCD 639 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y + KP L + + + + V + + + LL F+P + +I+ L Sbjct: 640 WYIELVKP-RLYGDDSNLKESAISVLIYTLTNVIKLLHPFMPYITEEIYSYL 690 Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 5/72 (6%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 H+GHA I D+L R +R+DG L+ GTD A A A V +K+ + S+ Sbjct: 52 HLGHALNNTIQDILIRKNRMDGYSALWVPGTDH-----ASIATEAKVVSKLKEEGKSKES 106 Query: 81 RDMADVLDISYD 92 L+ S+D Sbjct: 107 LGRDGFLEASWD 118 >gi|300769703|ref|ZP_07079586.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308181105|ref|YP_003925233.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ST-III] gi|300492746|gb|EFK27931.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046596|gb|ADN99139.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 889 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 93/195 (47%), Gaps = 14/195 (7%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G+ P DP+ ++ W + +T G+ + +++P D V G DI+ F Sbjct: 439 GVDGPKDPENWEQDPDVLDTWFSSALWPFSTMGWPNTDAEDFKRYFPTDTLVTGYDIIFF 498 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P K V HG I +G K+SKSLGN IDP++VIE+ G DALR+ Sbjct: 499 WVSRMMFQSLEFTGKRPF-KHVLLHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 557 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386 FL G+D + + N N I N SR V M L D +P +T + Sbjct: 558 FLSNGSTAGQDVRFSYTKMDAAWN--FINKIWN-ASRYVIMNLGTMDKPELPAASDWTLA 614 Query: 387 DESILSVCSRVLQEI 401 D+ ILS + ++++ Sbjct: 615 DKWILSRLNATVKQV 629 Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 44 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 103 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FV Q + + M LD S + F T + D + Sbjct: 104 EQGISRYDLGREKFVQQVWDWKDEYASIIKQQWAKMGLSLDYSRERF--TMDDGLSDAVK 161 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G Y W A + + ++K G +Y+ ++ Sbjct: 162 KVFVDLYNKGLIYRGEYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 209 >gi|126178353|ref|YP_001046318.1| isoleucyl-tRNA synthetase [Methanoculleus marisnigri JR1] gi|166229750|sp|A3CSI6|SYI_METMJ RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|125861147|gb|ABN56336.1| Isoleucyl-tRNA synthetase [Methanoculleus marisnigri JR1] Length = 1059 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 80/289 (27%), Positives = 132/289 (45%), Gaps = 36/289 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILR--FHAIYWPAFLLSA 282 I VW D+ T G+ P +A + WPAD G+D R F++ + + Sbjct: 515 IFDVWFDSAVASWATLGF---PREREAFDRLWPADFITEGQDQTRGWFYSQLGASTVAFG 571 Query: 283 NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341 P K V HGF L G K+SKS GNV+ P EV+ + GVD LR++++ A D + Sbjct: 572 RAPY-KSVLMHGFALDADGRKMSKSFGNVVTPEEVMNQFGVDVLRFYVLWANAPWDDLKF 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAF------------TESDE 388 + D +K ++ L N + N+ + M+L ++ G + E D Sbjct: 631 NWDSVKT-IHRTL-NILWNVYRFPLPYMVLDSFEPAAGDGGLWDGSFVRGNINDMPEEDR 688 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDR-YFDAQKP--WELKKTNPDRA 444 I+S + + + +MQ +HR + + + E + R Y +P W L++ +P++ Sbjct: 689 WIISRVNSLARTTAGDMQEYHLHRVTRALAAFILEDLSRWYVQLVRPRMW-LEEDSPEKR 747 Query: 445 ---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490 TV Y V+R+L LL F P +A +I+ L +A + LD Sbjct: 748 YAYETVYY----VMRRLVALLAPFTPHIAEEIYGNLRLAGDPESVHMLD 792 Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 23/148 (15%) Query: 15 YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTK--- 70 Y H+G A+ II D + R+HR+ G +++ G D HG I K G T+K Sbjct: 48 YTTGHIHLGTAWNKIIKDTILRYHRMGGRNIIERAGYDMHGLPIEVKVEHQLGFTSKKDI 107 Query: 71 ------VFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113 F++Q S FR + LD +DD +T + + ++ ++ Sbjct: 108 EDYGIAAFIEQCRTFAVTHMEIMSEQFRQLGIWLD--FDDPYQTIKAEYIESAWWAVQRA 165 Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 ++G + +G + R E D EV Sbjct: 166 EERGLLERGHRVVNWCPRCETAIADSEV 193 >gi|145350050|ref|XP_001419436.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579667|gb|ABO97729.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 924 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 21/269 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ + F+PA + G DIL F + ++ ++ L Sbjct: 467 VLDTWFSSGLWPFSTCGWPNEEAPDMKNFFPASVLETGHDILFFWVARMIMMSYGMTGKL 526 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P VF HG + +G K+SKSLGNV+DP+ VI E G DALR+ L G+D + Sbjct: 527 PF-HTVFLHGLVRDSQGRKMSKSLGNVVDPLGVIAEQGCDALRFTLATGTTPGQDLNLNL 585 Query: 344 DGLKKRVNADLANGI---GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + L N + N I G V S+ + D + GA +DE+ ++ + Sbjct: 586 ERLAS--NRNFTNKIWNAGKFVLYSMEDMTDDERMALVDEGAALCADEASIAELPLAERW 643 Query: 401 IRENMQNQLIHRALAQVISLVSEVDR-----YFDAQKPWELKKT-------NPDRASTVL 448 I + + H AQ E R ++D+ W ++ + D A Sbjct: 644 IVSKLNATVDHVTAAQDKYDFGEAGRSTYTFFYDSFADWFIEGAKSRTYGDDADAARVTK 703 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477 VT+ V+ Q LL FVP + +++ L Sbjct: 704 AVTLYVLDQTLRLLHPFVPYVTEEVWQAL 732 >gi|325678885|ref|ZP_08158483.1| valine--tRNA ligase [Ruminococcus albus 8] gi|324109389|gb|EGC03607.1| valine--tRNA ligase [Ruminococcus albus 8] Length = 897 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 88/363 (24%), Positives = 152/363 (41%), Gaps = 54/363 (14%) Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 H+ ++ M + +F ++ + + E +P +++++ G +D +SR+ Sbjct: 373 HSTIEPMISKQWFVKMKPLAEPAIQAVEEGKIKFVPERFTKTYLNWMR-GTRDWCISRQL 431 Query: 214 FDWGIKIP----DDPQYI------------------------MYVWIDALTNYLTTTGYL 245 + WG +IP DD I + W + + G+ Sbjct: 432 W-WGHRIPAWYCDDCGEINVAKSAPCKCKKCGSTNLTQDEDSLDTWFSSALWPFSILGWP 490 Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HK 299 D F+P V G DI+ F W + ++ + L K V HG + + Sbjct: 491 DKQSDDFNYFYPTSTLVTGYDIIGF----WVSRMIFSGLAYTGKAPFDTVLIHGIVRDSQ 546 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKSLGN IDP+ VI++ G DALR+ LV+ + G D Y ++ + N N I Sbjct: 547 GRKMSKSLGNGIDPLVVIDQYGADALRFMLVQGSSPGNDMRYSEEKIVAMRN--FTNKIW 604 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 N S +++ I P T D+ ILS ++V +E+ N+++ + A +V Sbjct: 605 NA---SRFLLMNMTIDKIELPKELTLEDKWILSSLNKVAKEVTYNLEHFEMGVAAQKVYD 661 Query: 420 LV--SEVDRYFDAQKPWELKKTNPDRAST---VLYVTVEVIRQLAILLQAFVPKLANKIF 474 + S D Y + K + N D A V V V+ + LL F+P + +I+ Sbjct: 662 FIWNSFCDWYIELAK----NRFNGDDAQAKKNVENVLAYVLTDILKLLHPFMPFITEEIY 717 Query: 475 DIL 477 L Sbjct: 718 QAL 720 Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust. Identities = 43/191 (22%), Positives = 82/191 (42%), Gaps = 29/191 (15%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S A+ PN Q H+GHA + + D+L RF R+ G L+ GTD KI +A + Sbjct: 39 SIAMPPPNVTGQLHMGHAVDNTMQDILTRFKRMQGYAALWIPGTDHAAIATEAKIVEAMR 98 Query: 64 NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G+T + F + R + D + F T +++ Sbjct: 99 QEGLTKADLGREKFMERAWAWKEKFGGRIVEQLRTLGTSCDWEREHF--TMDEQCSKAVL 156 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYF 166 ++ K+ ++G IY+G + + + +D EV Y+ DG +++ + ++E G F Sbjct: 157 EVFVKLYEEGLIYRGNRMVNWCPKCQTSISDAEVEYENKDGNFWHILYK----VKETGEF 212 Query: 167 FRLSAYQDKLL 177 ++ + + + Sbjct: 213 LEIATTRPETM 223 >gi|14590903|ref|NP_142976.1| isoleucyl-tRNA synthetase [Pyrococcus horikoshii OT3] gi|6647822|sp|O58792|SYI_PYRHO RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|3257481|dbj|BAA30164.1| 1066aa long hypothetical isoleucyl-tRNA synthetase [Pyrococcus horikoshii OT3] Length = 1066 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 131/258 (50%), Gaps = 14/258 (5%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD-ILRFHAIYWPAFLLSANLPLPK 288 VW D+ + GY N + + K WPAD V G+D + ++ A +++ + + Sbjct: 552 VWFDSGIASWASLGYPRNKELFE-KLWPADFIVEGEDQVTKWFYSQQAASVIAFDTVPYR 610 Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +V HG++L KG+K+SKSLGN+I P EV+E+ G D R++++ ++ + G++ Sbjct: 611 RVAMHGYVLDEKGDKMSKSLGNIIRPEEVVEKAGRDTFRFYMLWATNPWENLKFSWKGVE 670 Query: 348 KRVNADLANGIGNLVSRSVS-MILKDYD--GMIPTPGAFTESDESILSVCSRVLQEIREN 404 + + N + N+ S + M L ++D + AF E D+ ILS + +++E+ Sbjct: 671 Q--VRRMLNILWNVYVLSATYMSLDNFDPRNVKVEELAFREEDKWILSRVNSLIREVENG 728 Query: 405 MQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460 ++ + +A + + V E + R++ ++ W ++ +PD+ + Y +V L Sbjct: 729 IETFYLTKATRALYNFVVEDLSRWYVRLIRKRLW-VEGDDPDKLAA-YYTLWKVFDVLLR 786 Query: 461 LLQAFVPKLANKIFDILF 478 L+ F P + +I+ L Sbjct: 787 LMAPFTPYITEEIYQNLM 804 Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQN 64 K Y Y + H+G A+ II D++ RF + G +V G D HG I K Q Sbjct: 41 KYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVWRQPGFDMHGLPIEVKVEQA 100 Query: 65 AGVTTKVFVDQN 76 G+ TK +++ Sbjct: 101 LGLKTKKEIEEK 112 >gi|228923211|ref|ZP_04086501.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836417|gb|EEM81768.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 881 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|207108940|ref|ZP_03243102.1| methionyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1] Length = 228 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 95/170 (55%), Gaps = 2/170 (1%) Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KSLGNV+D ++ E G++ LRYFL+RE+ G+DG + K L +R+NA+L N +GNL++R Sbjct: 1 KSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNLLNR 60 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + M K ++ + + T L ++L + +H+AL ++ ++ + Sbjct: 61 LLGMAKKYFNHSLKS-AKITAYYPKELEKAHQILDNANSFVPKMQLHKALEELFNVYDFL 119 Query: 425 DRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ ++PW L K N ++ +L + + Q + LL AF+PK A K+ Sbjct: 120 NKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSATKL 169 >gi|329667571|gb|AEB93519.1| valyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026] Length = 879 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 115/269 (42%), Gaps = 41/269 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ +K+L ++ + ER + S + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLAEKVLENQKTDDKVNFVPERFEHTLEQWMSDVHDWVISRQLW-WGHRIPAWY 418 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D +++P + Sbjct: 419 NKKTGETYVGLEAPKDSENWEQDPD-VLDTWFSSALWPFSTLGWPDENSEDFKRYFPTNT 477 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNVIDPI 314 V G DI+ F W + ++ +L K V HG I +G K+SKSLGN +DP+ Sbjct: 478 LVTGYDIIFF----WVSRMIFQSLHFTGKRPFDDVVLHGLIRDPQGRKMSKSLGNGVDPM 533 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372 +V++E G DALR+FL+ A G+D YD + N N I N SR V M L + Sbjct: 534 DVVDEYGADALRWFLLNGTAPGQDTRYDPKKMGAAWN--FINKIWN-ASRFVIMNLPEDA 590 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F +D I + + E+ Sbjct: 591 QPAHMPDTSKFDLADSWIFDRLNHTVSEV 619 Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L RF R+ G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98 Query: 64 NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G + + FV Q + M LD S + F T +K R Sbjct: 99 TQGKDRHEMGREAFVKQVWDWKDEYAAIIKSQWAKMGLSLDYSRERF--TLDKGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ ++ ++G IY+G Y + + E +D EV +K G +Y+ ++ Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPKLETALSDIEVIHKDDKGAFYHIKY 204 >gi|189083229|sp|A6WRJ9|SYL_SHEB8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS Length = 859 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 17/240 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+ARF RL G +VL G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 N + +N ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 92 NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 S + DE +++V DG + PV+ E +F +++AY ++LL+ Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 + PE + ++R R+E + ++ K+FD PD + YV I A Sbjct: 208 TLDGWPEQVKTMQRNWIGRSEGVEMTFG----VAGHDKSFDIYTTRPDTLMGVTYVAIAA 263 >gi|268319720|ref|YP_003293376.1| hypothetical protein FI9785_1249 [Lactobacillus johnsonii FI9785] gi|262398095|emb|CAX67109.1| valS [Lactobacillus johnsonii FI9785] Length = 879 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 115/269 (42%), Gaps = 41/269 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ +K+L ++ + ER + S + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLAEKVLENQKTDDKVNFVPERFEHTLEQWMSDVHDWVISRQLW-WGHRIPAWY 418 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D +++P + Sbjct: 419 NKKTGEIYVGLEAPKDSENWEQDPD-VLDTWFSSALWPFSTLGWPDEDSEDFKRYFPTNT 477 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNVIDPI 314 V G DI+ F W + ++ +L K V HG I +G K+SKSLGN +DP+ Sbjct: 478 LVTGYDIIFF----WVSRMIFQSLHFTGKRPFDDVVLHGLIRDPQGRKMSKSLGNGVDPM 533 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372 +V++E G DALR+FL+ A G+D YD + N N I N SR V M L + Sbjct: 534 DVVDEYGADALRWFLLNGTAPGQDTRYDPKKMGAAWN--FINKIWN-ASRFVIMNLPEDA 590 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F +D I + + E+ Sbjct: 591 KPAHMPDTSKFDLADSWIFDRLNHTVSEV 619 Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L RF R+ G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98 Query: 64 NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G + + FV Q + M LD S + F T +K R Sbjct: 99 TQGKDRHEMGREAFVKQVWDWKDEYASIIKSQWAKMGLSLDYSRERF--TLDKGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ ++ ++G IY+G Y + + E +D EV +K G +Y+ ++ Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPKLETALSDIEVIHKDDKGAFYHIKY 204 >gi|186684785|ref|YP_001867981.1| valyl-tRNA synthetase [Nostoc punctiforme PCC 73102] gi|186467237|gb|ACC83038.1| valyl-tRNA synthetase [Nostoc punctiforme PCC 73102] Length = 994 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 72/301 (23%), Positives = 133/301 (44%), Gaps = 26/301 (8%) Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK- 252 N KS + ++ F +K+ DP ++ W + +T G+ P+ ++ Sbjct: 434 NTPFVVAKSETEAWEKAKSQFGENVKLEQDPD-VLDTWFSSGLWPFSTLGW---PEQTQD 489 Query: 253 -AKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKIS 304 A ++P V G DI+ F W A + + +P + V+ HG +L KG+K+S Sbjct: 490 LATYYPTTTLVTGFDIIFF----WVARMTMMAGHFTQQMPF-QTVYIHGLVLDEKGQKMS 544 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLV 362 K+ GN IDP+ +I++ G DALRY L+RE+A G+D + D K + + + + N + Sbjct: 545 KTKGNGIDPLLLIDKYGTDALRYTLIREVAGAGQDIRLEYDRKKDESASVEASRNFANKL 604 Query: 363 SRSVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 + ++ + DG P P A SD I+S +V+++ + N + A + Sbjct: 605 WNAARFVMMNLDGQTPQQLGNPVATELSDRWIISRYHQVIKQTSNYIDNYGLGEAAKGLY 664 Query: 419 SLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 + D+Y + K +P ++ + LL +P + +I+ Sbjct: 665 EFIWGDFCDQYIELVKSRLQADADPVSRRVAQQTLGYILEGILKLLHPLMPHITEEIWQT 724 Query: 477 L 477 L Sbjct: 725 L 725 Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust. Identities = 15/32 (46%), Positives = 22/32 (68%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 H+GHA+E + D L R+HR+ G + L+ GTD Sbjct: 56 HMGHAFESALIDTLVRYHRMQGRNTLWLPGTD 87 >gi|218133173|ref|ZP_03461977.1| hypothetical protein BACPEC_01035 [Bacteroides pectinophilus ATCC 43243] gi|217992046|gb|EEC58050.1| hypothetical protein BACPEC_01035 [Bacteroides pectinophilus ATCC 43243] Length = 893 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P D+ V G DI+ F I + + P K +F HG + +G K+SKSLGN I Sbjct: 475 FYPTDVLVTGYDIIFFWVIRMIFSGYEHMGEKPFGKVLF-HGLVRDSQGRKMSKSLGNGI 533 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368 DP+EVI++ G DALR L+ A G D FY +RV A + AN + N + Sbjct: 534 DPLEVIDKYGADALRLTLITGNAPGNDMRFY-----WERVEASRNFANKVWNATR---FI 585 Query: 369 ILKDYDGMIPT-----------------PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 ++ D +G I P T +D+ ILS ++V+ E+ ENM+ + Sbjct: 586 MMNDPEGRIKPGNIKVNGNGGSSSAYKLPENLTAADKWILSRMNKVVAEVTENMEKYELG 645 Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 A++++ + + D Y + KP + + + V + ++ L +L ++P + Sbjct: 646 IAVSKLQDFIWDEFCDWYIEMVKPRLYNDEDTTKDAAVWTLKTVLVDALK-MLHPYMPFV 704 Query: 470 ANKIF 474 +IF Sbjct: 705 TEEIF 709 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 +R K + + PN + H+GHA + + D+L RF R+ G + L+ GTD Sbjct: 33 DRSKKPFTIVMPPPNITGKLHMGHALDNTMQDILIRFKRMQGYEALWIPGTD 84 >gi|75909191|ref|YP_323487.1| valyl-tRNA synthetase [Anabaena variabilis ATCC 29413] gi|75702916|gb|ABA22592.1| valyl-tRNA synthetase [Anabaena variabilis ATCC 29413] Length = 1002 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 73/290 (25%), Positives = 128/290 (44%), Gaps = 24/290 (8%) Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDIL 268 ++ F +++ DP ++ W + +T G+ + PD AK++P V G DI+ Sbjct: 450 AKAQFGENVQLEQDPD-VLDTWFSSGLWPFSTLGWPEQTPD--LAKYYPTTTLVTGFDII 506 Query: 269 RFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVG 321 F W A + + +P + V+ HG + +K+SKS N IDP+ +I++ G Sbjct: 507 FF----WVARMTMMAGHFTGQMPF-QTVYIHGLVRDENNKKMSKSANNGIDPLLLIDKYG 561 Query: 322 VDALRYFLVREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIP- 378 DALRY LVRE+A G+D + D K + + + + N + + ++ + DG P Sbjct: 562 TDALRYTLVREVAGAGQDIRLEYDRKKDESPSVEASRNFANKLWNAARFVMMNLDGQTPG 621 Query: 379 ---TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP 433 P A SD I+S +V+++ + N + A + + D Y + K Sbjct: 622 QLGQPNATELSDRWIISRYHQVIKQTTNYIDNYGLGEAAKGIYEFIWGDFCDWYIELVKS 681 Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 K +P V+ + LL F+P + +I+ L EN Sbjct: 682 RLQKDADPLSRKAAQQTLAYVLEGILKLLHPFMPHITEEIWQTLTQQPEN 731 Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust. Identities = 15/32 (46%), Positives = 22/32 (68%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 H+GHA+E + D L R+HR+ G + L+ GTD Sbjct: 56 HMGHAFESALIDTLVRYHRMQGRNTLWLPGTD 87 >gi|228954741|ref|ZP_04116763.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229192669|ref|ZP_04319628.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|228590759|gb|EEK48619.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|228804939|gb|EEM51536.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 867 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTD 467 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 524 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 87 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 146 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194 >gi|206969837|ref|ZP_03230791.1| valyl-tRNA synthetase [Bacillus cereus AH1134] gi|218233729|ref|YP_002369265.1| valyl-tRNA synthetase [Bacillus cereus B4264] gi|229071967|ref|ZP_04205177.1| Valyl-tRNA synthetase [Bacillus cereus F65185] gi|206735525|gb|EDZ52693.1| valyl-tRNA synthetase [Bacillus cereus AH1134] gi|218161686|gb|ACK61678.1| valine--tRNA ligase [Bacillus cereus B4264] gi|228711126|gb|EEL63091.1| Valyl-tRNA synthetase [Bacillus cereus F65185] Length = 881 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|153001820|ref|YP_001367501.1| leucyl-tRNA synthetase [Shewanella baltica OS185] gi|151366438|gb|ABS09438.1| leucyl-tRNA synthetase [Shewanella baltica OS185] Length = 874 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 17/240 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+ARF RL G +VL G D G AA Sbjct: 47 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 106 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 N + +N ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 107 NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 166 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 S + DE +++V DG + PV+ E +F +++AY ++LL+ Sbjct: 167 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 222 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 + PE + ++R R+E + ++ K+FD PD + YV I A Sbjct: 223 TLDGWPEQVKTMQRNWIGRSEGVEMTFG----VAGHDKSFDIYTTRPDTLMGVTYVAIAA 278 >gi|229552054|ref|ZP_04440779.1| valine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|229314571|gb|EEN80544.1| valine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] Length = 901 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 15/186 (8%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 DP ++ W + +T G+ + +++P D V G DI+ F W A ++ Sbjct: 465 DPD-VLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 519 Query: 283 NLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 L + HG + +G K+SKSLGN IDP++VIE+ G DALR+FL+ G Sbjct: 520 GLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 579 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395 +D + ++ N N I N +SR V M L D D P P F SD+ + + + Sbjct: 580 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLN 636 Query: 396 RVLQEI 401 ++++ Sbjct: 637 ETIKQV 642 Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 62 SIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 121 Query: 64 NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ KV F + M LD S + F T +K + R Sbjct: 122 KEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERF--TLDKGLNQAVR 179 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + ++G IY+G Y W A + + ++K G +Y+ ++ Sbjct: 180 RVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDDKGAFYHVKY 227 >gi|229123998|ref|ZP_04253190.1| Valyl-tRNA synthetase [Bacillus cereus 95/8201] gi|228659300|gb|EEL14948.1| Valyl-tRNA synthetase [Bacillus cereus 95/8201] Length = 881 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|288574913|ref|ZP_06393270.1| valyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570654|gb|EFC92211.1| valyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 887 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 113/264 (42%), Gaps = 16/264 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D + F+P L V G DI+ F W + ++ L Sbjct: 453 VLDTWFSSALWPFSTLGWPDKTE-ELEHFYPTSLMVTGFDIIFF----WVSRMIMMGLEF 507 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V+ H + +G+K+SKS GNVIDP+ +I++ G DALR+ + G+D Sbjct: 508 MDEIPFNDVYIHALVRDEQGQKMSKSKGNVIDPLIMIDQFGADALRFTVAALTMPGRDIL 567 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ + N I N SR M L D D P D+ I+ S+V + Sbjct: 568 LSPSKIENYRH--FLNKIWN-ASRFALMNLGDSDPSRPDEKDLRLHDKWIMDRLSKVNSQ 624 Query: 401 IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 + + + LI A + + D Y + KP DR L+V ++V ++ Sbjct: 625 VTDYLDEYLIGDAARLLYDFIWGDLCDWYVEMSKPALWGDEGEDRKEATLWVLLDVFKET 684 Query: 459 AILLQAFVPKLANKIFDILFVADE 482 LL F+P L +++ E Sbjct: 685 LSLLHPFIPFLTEELWQAFGFGQE 708 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 26/162 (16%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56 ++EK S I PN H+GHA+ D++ R+ R+ G +VL+ GTD G Sbjct: 36 DKEKEAFSIVIPPPNVTGSLHMGHAFNNTFQDIICRYKRMRGYNVLWLPGTDHAGIATQN 95 Query: 57 KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC---------- 106 + + G++ D + +F D Y + I +K+ ++C Sbjct: 96 VVERELAKEGISRH---DMSREDFIDRVWAWKEEYGNRIINQQKKLGNSCDWRRLRFTMD 152 Query: 107 -------RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 R ++ ++ +KG IY+G Y + R + +D EV Sbjct: 153 EGLSKAVRAVFVRLYEKGLIYRGKYIINWCPRCQTALSDLEV 194 >gi|149915811|ref|ZP_01904336.1| valyl-tRNA synthetase [Roseobacter sp. AzwK-3b] gi|149810393|gb|EDM70238.1| valyl-tRNA synthetase [Roseobacter sp. AzwK-3b] Length = 975 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/259 (26%), Positives = 120/259 (46%), Gaps = 18/259 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + + T G+ D+ + K K++P + + G DI+ F W A ++ + Sbjct: 545 VLDTWFSSGLWPIGTLGWPDDTEELK-KYFPTSVLITGFDIIFF----WVARMMMMQYAV 599 Query: 287 -PKKVFSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +K FSH ++ KG+K+SKSLGNV+DP+++I++ G DA+R+ L A G+D Sbjct: 600 VGQKPFSHVYVHALVRDEKGKKMSKSLGNVLDPLDLIDDYGADAVRFTLTAMAAMGRDLK 659 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 KD + N + N + DG IP P A ++ I+ ++V + Sbjct: 660 LSKDRIAGYRN--FTTKLWNAARFAEMNGATSSDGTIPQPDATV--NKWIIGETAKVRET 715 Query: 401 IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 + E + + A + + V D Y + KP L + RA T + VI Q Sbjct: 716 VDEALAAFRFNDAANALYAFVWGKVCDWYVEFSKPLLLDGDDATRAETQATMAW-VIDQC 774 Query: 459 AILLQAFVPKLANKIFDIL 477 ILL +P + +++ L Sbjct: 775 LILLHPIMPFVTEELWGTL 793 Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 25/87 (28%) Query: 3 EREKLYISTAIAYPNAQP--------------HIGHAYEMIIADVLARFHRLDGLDVLFT 48 E+ + + A A P A+P H+GHA+ + D+L R+HR+ G D L+ Sbjct: 21 EQTGAFKAGANARPGAEPFCIMIPPPNVTGSLHMGHAFNNTLQDILIRWHRMRGDDTLWQ 80 Query: 49 TGTDEHGQKIAKAAQNAGVTTKVFVDQ 75 G D +AG+ T++ V++ Sbjct: 81 PGQD-----------HAGIATQMVVER 96 >gi|30022546|ref|NP_834177.1| valyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|229048175|ref|ZP_04193744.1| Valyl-tRNA synthetase [Bacillus cereus AH676] gi|229111929|ref|ZP_04241473.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|296504949|ref|YP_003666649.1| valyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|81433513|sp|Q817R6|SYV_BACCR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|29898104|gb|AAP11378.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|228671493|gb|EEL26793.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|228723162|gb|EEL74538.1| Valyl-tRNA synthetase [Bacillus cereus AH676] gi|296326001|gb|ADH08929.1| valyl-tRNA synthetase [Bacillus thuringiensis BMB171] Length = 881 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|229152660|ref|ZP_04280848.1| Valyl-tRNA synthetase [Bacillus cereus m1550] gi|228630806|gb|EEK87447.1| Valyl-tRNA synthetase [Bacillus cereus m1550] Length = 867 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 408 WYHKETGEVYVGTEAPVDIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTD 467 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 524 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 87 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 146 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194 >gi|228960734|ref|ZP_04122373.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229129750|ref|ZP_04258717.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|229147028|ref|ZP_04275388.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|229180734|ref|ZP_04308072.1| Valyl-tRNA synthetase [Bacillus cereus 172560W] gi|228602712|gb|EEK60195.1| Valyl-tRNA synthetase [Bacillus cereus 172560W] gi|228636416|gb|EEK92886.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|228653666|gb|EEL09537.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|228798950|gb|EEM45925.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 867 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTD 467 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 524 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 87 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 146 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194 >gi|259649574|dbj|BAI41736.1| valyl-tRNA synthetase [Lactobacillus rhamnosus GG] Length = 901 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P D V G DI+ F W A ++ L Sbjct: 468 VLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPF----WVARMIFQGLHF 523 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + HG + +G K+SKSLGN IDP++VIE+ G DALR+FL+ G+D Sbjct: 524 THQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPGQDTR 583 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQ 399 + ++ N N I N +SR V M L D D P P F SD+ + + + ++ Sbjct: 584 FSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLNETIK 640 Query: 400 EI 401 ++ Sbjct: 641 QV 642 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 62 SIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 121 Query: 64 NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ KV F + M LD S + F T +K + R Sbjct: 122 KEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERF--TLDKGLNQAVR 179 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + ++G IY+G Y W A + + ++K G +Y+ ++ Sbjct: 180 RVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDDKGAFYHVKY 227 >gi|229081723|ref|ZP_04214216.1| Valyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|228701568|gb|EEL54061.1| Valyl-tRNA synthetase [Bacillus cereus Rock4-2] Length = 867 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTD 467 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 524 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 87 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 146 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194 >gi|161507301|ref|YP_001577255.1| valyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] gi|160348290|gb|ABX26964.1| Valyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] Length = 879 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 113/269 (42%), Gaps = 41/269 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+L ++ + ER + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLENQKTDGKVNFVPERFEGTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D +++P + Sbjct: 419 NKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTNSEDFKRYFPTNA 477 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314 V G DI+ F W + ++ +L K + +LH +G K+SKSLGN +DP+ Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372 +V+++ G DALR+FL+ A G+D YD L N N I N SR V M L Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPSDA 590 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F SD I + + E+ Sbjct: 591 KPAHMPDVSKFDLSDRWIFDRLNHTVSEV 619 Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 S I PN + H+GHA++ I D L RF R+ G D L+ G D G Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAG 86 >gi|154151808|ref|YP_001405426.1| isoleucyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8] gi|166229748|sp|A7IAM2|SYI_METB6 RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|154000360|gb|ABS56783.1| isoleucyl-tRNA synthetase [Methanoregula boonei 6A8] Length = 1076 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 77/281 (27%), Positives = 127/281 (45%), Gaps = 21/281 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 I VW D+ T G+ D + K WPAD G+D R F++ + + Sbjct: 515 IFDVWFDSAVASWATVGFPAKTDEFE-KLWPADFITEGQDQTRGWFYSQLGASTIAFGKA 573 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K V HGF L +G K+SKSLGNV+ P EVI +VGVD LR +++ A D ++ Sbjct: 574 PY-KSVCMHGFALDAEGRKMSKSLGNVVAPEEVIAKVGVDVLRLYVLSSSAPWDDLKFNW 632 Query: 344 DGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTP---GAFTES--------DESIL 391 DG+ VN + N + N+ + MIL ++ + G+F S D I+ Sbjct: 633 DGIAT-VNRTM-NILWNVYRFPMPYMILDRFEPEAKSGHWDGSFVRSHIRELPDEDRWIV 690 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYV 450 S + V + + + +HRA ++++ + E + R++ + Y Sbjct: 691 SRINTVAGIVDASTKECQLHRATREILNFILEDLSRWYVQLVRPRMWLEGESEQKIFAYE 750 Query: 451 TV-EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490 T+ V+R+L L+ F P + +I+ L ++ LD Sbjct: 751 TIYYVMRRLVDLMAPFAPHITEEIYSNLRCKNDPGSVHMLD 791 Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 15 YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTK 70 Y Q H+G A+ II D + R+HR++G +V+ G D HG I K Q G +K Sbjct: 48 YTTGQIHLGTAWNKIIKDSILRYHRMNGRNVIDRAGYDMHGLPIEVKVEQKLGFASK 104 >gi|47779360|gb|AAT38589.1| predicted leucyl tRNA synthetase [uncultured gamma proteobacterium eBACHOT4E07] Length = 801 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 6/181 (3%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +REK Y + YP+ + H+GH I DV++R+ R+ +V G D G AA Sbjct: 30 KREKYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYKRMKNFNVFQPMGWDAFGLPAENAA 89 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 V+ + + +QN N + L SYD +RT + ++ ++++KK D G +Y Sbjct: 90 IANKVSPEDWTNQNIENMKSQLQSLGFSYDWSKELRTCDSSYYKWEQLIFKKFYDAGLVY 149 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 + + D+ +++V G G AQ ++ E + +F +++ Y D+LLS Sbjct: 150 RKKSMVNWDPEDKTVLANEQVIDGK-GWRSGAQ---IEIKEIDQWFIKITDYADELLSSL 205 Query: 181 E 181 E Sbjct: 206 E 206 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 10/87 (11%) Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKI 303 K+W P DL++ G + H +Y F L+ + P K++ + G +L G K+ Sbjct: 504 TKYWLPVDLYIGGIEHAILHLLYSRFFHKALRDIGLVEGDEPF-KRLLTQGMVLKDGAKM 562 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLV 330 SKS GN +DP IE+ G D +R +++ Sbjct: 563 SKSKGNTVDPQSYIEKYGADTVRLYMM 589 >gi|227889741|ref|ZP_04007546.1| valyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] gi|227849605|gb|EEJ59691.1| valyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] Length = 879 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 115/269 (42%), Gaps = 41/269 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ +K+L ++ + ER + S + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLAEKVLENQKTDDKVNFVPERFEHTLEQWMSDVHDWVISRQLW-WGHRIPAWY 418 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D +++P + Sbjct: 419 NKKTGETYVGLEAPKDSENWEQDPD-VLDTWFSSALWPFSTLGWPDEDSEDFKRYFPTNT 477 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNVIDPI 314 V G DI+ F W + ++ +L K V HG I +G K+SKSLGN +DP+ Sbjct: 478 LVTGYDIIFF----WVSRMIFQSLHFTGKRPFDDVVLHGLIRDPQGRKMSKSLGNGVDPM 533 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372 +V++E G DALR+FL+ A G+D YD + N N I N SR V M L + Sbjct: 534 DVVDEYGADALRWFLLNGTAPGQDTRYDPKKMGAAWN--FINKIWN-ASRFVIMNLPEDA 590 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F +D I + + E+ Sbjct: 591 KPAHMPDTSKFDLADSWIFDRLNHTVSEV 619 Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L RF R+ G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98 Query: 64 NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G + + FV Q + M LD S + F T +K R Sbjct: 99 TQGKDRHEMGREAFVKQVWDWKDEYASIIKSQWAKMGLSLDYSRERF--TLDKGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ ++ ++G IY+G Y + + E +D EV +K G +Y+ ++ Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPKLETALSDIEVIHKDDKGAFYHIKY 204 >gi|260102647|ref|ZP_05752884.1| valine-tRNA ligase [Lactobacillus helveticus DSM 20075] gi|260083552|gb|EEW67672.1| valine-tRNA ligase [Lactobacillus helveticus DSM 20075] Length = 879 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 113/269 (42%), Gaps = 41/269 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+L ++ + ER + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLENQKTDGKVNFVPERFEGTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D +++P + Sbjct: 419 NKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTNSEDFKRYFPTNA 477 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314 V G DI+ F W + ++ +L K + +LH +G K+SKSLGN +DP+ Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372 +V+++ G DALR+FL+ A G+D YD L N N I N SR V M L Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPSDA 590 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F SD I + + E+ Sbjct: 591 KPAHMPDVSKFDLSDRWIFDRLNHTVSEV 619 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 S I PN + H+GHA++ I D L RF R+ G D L+ G D G Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYIPGMDHAG 86 >gi|258539468|ref|YP_003173967.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705] gi|257151144|emb|CAR90116.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705] Length = 880 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 15/186 (8%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 DP ++ W + +T G+ + +++P D V G DI+ F W A ++ Sbjct: 444 DPD-VLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 498 Query: 283 NLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 L + HG + +G K+SKSLGN IDP++VIE+ G DALR+FL+ G Sbjct: 499 GLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 558 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395 +D + ++ N N I N +SR V M L D D P P F SD+ + + + Sbjct: 559 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLN 615 Query: 396 RVLQEI 401 ++++ Sbjct: 616 ETIKQV 621 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 41 SIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 100 Query: 64 NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ KV F + M LD S + F T +K + R Sbjct: 101 KEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERF--TLDKGLNQAVR 158 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + ++G IY+G Y W A + + ++K G +Y+ ++ Sbjct: 159 RVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDDKGAFYHVKY 206 >gi|15895665|ref|NP_349014.1| valyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|81529863|sp|Q97GG8|SYV_CLOAB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|15025413|gb|AAK80354.1|AE007740_1 Valyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|325509815|gb|ADZ21451.1| valyl-tRNA synthetase [Clostridium acetobutylicum EA 2018] Length = 881 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 76/262 (29%), Positives = 126/262 (48%), Gaps = 22/262 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D + + F+P D V G DI+ F W A ++ + + Sbjct: 451 VLDTWFSSALWPFSTLGWPDKNEDLEY-FYPTDTLVTGYDIIFF----WVARMVFSGIYN 505 Query: 285 --PLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +P K V+ HG + +G K+SKSLGN +DP++VI+ G DALR+ L+ A G D Sbjct: 506 MGEVPFKHVYIHGLVRDAEGRKMSKSLGNGVDPLDVIDTFGADALRFMLITGNAPGNDIR 565 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N AN I N SR V M L K+ ++ +D ILS C+ +++ Sbjct: 566 YKTEKVEAARN--FANKIWN-ASRFVLMNLDKEIMDKYKDLEEYSLADRWILSRCNSLVR 622 Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVI 455 E+ +N++ + A +V + D Y + KP + + A VLY + V Sbjct: 623 EVTDNIEKFELGIASQKVYDFMWNEFCDWYIELVKPVMYGEDEKAKGIAYNVLYKVLTVG 682 Query: 456 RQLAILLQAFVPKLANKIFDIL 477 Q LL +P + +I+ L Sbjct: 683 LQ---LLHPVMPYITEEIYQHL 701 >gi|257865153|ref|ZP_05644806.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257871477|ref|ZP_05651130.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257799087|gb|EEV28139.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257805641|gb|EEV34463.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC10] Length = 881 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 23/276 (8%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D + +++P + V G DI+ F Sbjct: 431 GLEAPADAENWQQDPDVLDTWFSSALWPFSTMGWPDETNEDFQRYFPTNTLVTGYDIIAF 490 Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ +L K V HG I +G K+SKSLGN IDP+EVIE+ G DA Sbjct: 491 ----WVSRMIFQSLEFTGKRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMEVIEQYGADA 546 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAF 383 LR+FL A G+D + + + N N I N SR V M + + I G Sbjct: 547 LRWFLSNGSAPGQDVRFSYEKMDAAWN--FINKIWN-ASRFVLMNVSEMTAEDIDFSGEK 603 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 + +D IL+ + ++++ + + A Q+ + + + D Y + K L N Sbjct: 604 SVADRWILTRLNETIEKVTDLFERFEFGEAGRQLYNFIWDDFCDWYIEMSKE-TLYGDNE 662 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + V V+ Q+ LL +P + +I+ L Sbjct: 663 AAKQVNKSILVHVLDQILRLLHPIMPFVTEEIWSKL 698 Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDTLWLPGMDHAGIATQAKVEEKLR 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FV+Q + + LD S + F T + + R Sbjct: 102 EQGISRYDLGREKFVEQVWDWKEEYAGHIREQWAKLGLSLDYSRERF--TLDDGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G Y W A + + ++K +G +Y+ + Sbjct: 160 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 207 >gi|258508256|ref|YP_003171007.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus GG] gi|257148183|emb|CAR87156.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus GG] Length = 880 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 15/186 (8%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 DP ++ W + +T G+ + +++P D V G DI+ F W A ++ Sbjct: 444 DPD-VLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 498 Query: 283 NLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 L + HG + +G K+SKSLGN IDP++VIE+ G DALR+FL+ G Sbjct: 499 GLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 558 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395 +D + ++ N N I N +SR V M L D D P P F SD+ + + + Sbjct: 559 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLN 615 Query: 396 RVLQEI 401 ++++ Sbjct: 616 ETIKQV 621 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 41 SIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 100 Query: 64 NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ KV F + M LD S + F T +K + R Sbjct: 101 KEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERF--TLDKGLNQAVR 158 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + ++G IY+G Y W A + + ++K G +Y+ ++ Sbjct: 159 RVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDDKGAFYHVKY 206 >gi|73671043|ref|YP_307058.1| isoleucyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro] gi|121725567|sp|Q465G4|SYI_METBF RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|7648799|gb|AAF65673.1|AF208389_1 isoleucyl-tRNA synthetase [Methanosarcina barkeri] gi|72398205|gb|AAZ72478.1| Isoleucyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro] Length = 1058 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/239 (28%), Positives = 119/239 (49%), Gaps = 21/239 (8%) Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKG-EKISKSLGNV 310 ++WPAD G D R F++ + + P K V HGF L G +K+SKSLGNV Sbjct: 546 EWWPADFITEGHDQTRGWFYSQLGASMVGFGRAPY-KSVLMHGFTLDAGGKKMSKSLGNV 604 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MI 369 + PI+VI++ G D LR +++ A D ++++ ++ V+ + N + N+ + M Sbjct: 605 VSPIDVIDKYGADTLRAYVLSSSAPWDDLKFNQEEVEN-VHRSI-NILWNVFRFPLPYMA 662 Query: 370 LKDYD----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-V 424 L ++D + A E D ILS V++ + E M +H+A+ +++ E + Sbjct: 663 LDNFDPLKVSLDSVKDALREEDRWILSRIQSVVKAVDEAMSGYFLHKAVREILEFTLEDL 722 Query: 425 DRYFDA---QKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 R++ + W + +PD+ A VLY EV L L+ F+P LA +++ L Sbjct: 723 SRWYIQLIRPRTW-TEADDPDKLAAYRVLY---EVYVTLTKLISPFMPYLAEEMYQNLI 777 >gi|199597497|ref|ZP_03210926.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus HN001] gi|199591520|gb|EDY99597.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus HN001] Length = 880 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 15/186 (8%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 DP ++ W + +T G+ + +++P D V G DI+ F W A ++ Sbjct: 444 DPD-VLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 498 Query: 283 NLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 L + HG + +G K+SKSLGN IDP++VIE+ G DALR+FL+ G Sbjct: 499 GLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 558 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395 +D + ++ N N I N +SR V M L D D P P F SD+ + + + Sbjct: 559 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLN 615 Query: 396 RVLQEI 401 ++++ Sbjct: 616 ETIKQV 621 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 41 SIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 100 Query: 64 NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ KV F + M LD S + F T +K + R Sbjct: 101 KEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERF--TLDKGLNQAVR 158 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + ++G IY+G Y W A + + ++K G +Y+ ++ Sbjct: 159 RVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDDKGAFYHVKY 206 >gi|90101527|sp|P36420|SYV_LACCA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS Length = 883 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 15/186 (8%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 DP ++ W + +T G+ + +++P D V G DI+ F W A ++ Sbjct: 447 DPD-VLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 501 Query: 283 NLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 L + HG + +G K+SKSLGN IDP++VIE+ G DALR+FL+ G Sbjct: 502 GLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 561 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395 +D + ++ N N I N +SR V M L D D P P F SD+ + + + Sbjct: 562 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLN 618 Query: 396 RVLQEI 401 ++++ Sbjct: 619 ETIKQV 624 Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R++G D L+ G D G K+ + Sbjct: 44 SIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRIEGFDTLWLPGMDHAGIATQAKVEAKLR 103 Query: 64 NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ KV F + M LD S + F T +K + R Sbjct: 104 KEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERF--TLDKGLNQAVR 161 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + ++G IY+G Y W A + + ++K G +Y+ ++ Sbjct: 162 RVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDDKGAFYHVKY 209 >gi|85858024|ref|YP_460226.1| leucyl-tRNA synthetase [Syntrophus aciditrophicus SB] gi|123515751|sp|Q2LQK5|SYL_SYNAS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|85721115|gb|ABC76058.1| leucyl-tRNA synthetase [Syntrophus aciditrophicus SB] Length = 862 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 95/194 (48%), Gaps = 9/194 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++K Y+ YP+ + HIGH I DV+AR+ R++G +VL G D G AA Sbjct: 32 KKKYYLLEMFPYPSGKIHIGHVRNYTIGDVVARYKRMEGYNVLHPMGWDSFGMPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+ ++ ++N + R + SY D + T E ++ ++ + + +KG YK Sbjct: 92 ERGIHPSLWTNENITHMRKQLKRMGFSYDWDREVSTCEPVYYRWEQLFFLWMYEKGLAYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 S + R + +++V G + V+ + ++ +FFR++AY D+LL+ + Sbjct: 152 KTSSVNWCPRCQTVLANEQVEAGL---CWRCGSEVVEKILDQ-WFFRITAYIDELLAGCD 207 Query: 182 ---SHPEFILPIER 192 PE +L ++R Sbjct: 208 RLTGWPERVLTMQR 221 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 25/188 (13%) Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 I+ K EK+SKSL NV+DP ++ + G D R F + KD + G++ Sbjct: 608 IVGKTEKMSKSLKNVVDPDYLVRQYGADTARMFCLFAAPPEKDLEWSDQGVE-------- 659 Query: 356 NGIGNLVSRSVSMI---LKDYDGMIPTPGAFTESDE--SILSVCSRVLQEIRENMQNQL- 409 G + R+ ++ L D G+ P G E S+ + ++++R++M + Sbjct: 660 -GSFRFIGRTWRIVVDYLDDLQGIAPFAGDGELEGELKSLRRKTHQTIRKVRDDMGERFH 718 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 + A++ ++ LV+ + + +P P T L V E I + +LL VP L Sbjct: 719 FNTAISAIMELVNTL---YGLPRP-------PREDRTALAVIRETIEAIILLLAPIVPHL 768 Query: 470 ANKIFDIL 477 +++ +L Sbjct: 769 TEELWQML 776 >gi|42518883|ref|NP_964813.1| valyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] gi|81667980|sp|Q74JZ8|SYV_LACJO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|41583169|gb|AAS08779.1| valyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] Length = 879 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 115/269 (42%), Gaps = 41/269 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ +K+L ++ + ER + S + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLAEKVLENQKTDDKVNFVPERFEHTLEQWMSDVHDWVISRQLW-WGHRIPAWY 418 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D +++P + Sbjct: 419 NKKTGETYVGLEAPKDSENWEQDPD-VLDTWFSSALWPFSTLGWPDENSEDFKRYFPTNT 477 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNVIDPI 314 V G DI+ F W + ++ +L K V HG I +G K+SKSLGN +DP+ Sbjct: 478 LVTGYDIIFF----WVSRMIFQSLHFTGKRPFDDVVLHGLIRDPQGRKMSKSLGNGVDPM 533 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372 +V++E G DALR+FL+ A G+D YD + N N I N SR V M L + Sbjct: 534 DVVDEYGADALRWFLLNGTAPGQDTRYDPKKMGAAWN--FINKIWN-ASRFVIMNLPEDA 590 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F +D I + + E+ Sbjct: 591 KPAHMPDTSKFDLADSWIFDRLNHTVSEV 619 Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L RF R+ G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98 Query: 64 NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G + + FV Q + M LD S + F T +K R Sbjct: 99 TQGKDRHEMGREAFVKQVWDWKDEYASIIKSQWAKMGLSLDYSRERF--TLDKGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ ++ ++G IY+G Y + + E +D EV +K G +Y+ ++ Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPKLETALSDIEVIHKDDKGAFYHIKY 204 >gi|409360|gb|AAA57558.1| valyl-tRNA synthetase [Lactobacillus casei] Length = 901 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 15/186 (8%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 DP ++ W + +T G+ + +++P D V G DI+ F W A ++ Sbjct: 465 DPD-VLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 519 Query: 283 NLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 L + HG + +G K+SKSLGN IDP++VIE+ G DALR+FL+ G Sbjct: 520 GLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 579 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395 +D + ++ N N I N +SR V M L D D P P F SD+ + + + Sbjct: 580 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLN 636 Query: 396 RVLQEI 401 ++++ Sbjct: 637 ETIKQV 642 Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R++G D L+ G D G K+ + Sbjct: 62 SIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRIEGFDTLWLPGMDHAGIATQAKVEAKLR 121 Query: 64 NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ KV F + M LD S + F T +K + R Sbjct: 122 KEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERF--TLDKGLNQAVR 179 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + ++G IY+G Y W A + + ++K G +Y+ ++ Sbjct: 180 RVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDDKGAFYHVKY 227 >gi|240102645|ref|YP_002958954.1| isoleucyl-tRNA synthetase [Thermococcus gammatolerans EJ3] gi|239910199|gb|ACS33090.1| Isoleucyl-tRNA synthetase (ileS) [Thermococcus gammatolerans EJ3] Length = 1066 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 81/334 (24%), Positives = 159/334 (47%), Gaps = 25/334 (7%) Query: 159 WMEEEGYFFRLSAYQD--KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 W E+G + + ++++ +L E E I E NE + ++ L L R D Sbjct: 474 WQAEDGEIYVVGSFKELVELAVAIEVDGERIELPEDYNEKLRVIEEKLGPEDLHRPYVDA 533 Query: 217 GIKIPDDPQY-----IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKD-IL 268 I + + ++ VW D+ + + LD P + K WPAD V G+D + Sbjct: 534 FIIKVNGKEMKRVKDVVDVWFDS---GIASWASLDYPRNKELFEKLWPADFIVEGEDQVT 590 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 ++ A +++ + + V HG++L KG+K+SKSLGN+I P EV+++ G D R+ Sbjct: 591 KWFYSQQAASVIAFDTVPYRAVAMHGYVLDEKGDKMSKSLGNIIRPEEVVQKEGRDPFRF 650 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDYD--GMIPTPGAFT 384 +++ ++ + GL + + N + N+ S + M L ++D + P F Sbjct: 651 YMLWATNPWENLRFSWKGLAQ--VKRMLNILWNVYVLSATYMSLDNFDPTKLKPEEFPFR 708 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYF---DAQKPWELKKTN 440 E D ILS + +++++ E ++ + +A + + V E + R++ ++ W ++ + Sbjct: 709 EEDRWILSRVNGLIKDVEEGIETFRLTKATRAIYTFVVEDLSRWYIRLIRKRMW-VEGDD 767 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 PD+ + Y +V L L+ F P +A +I+ Sbjct: 768 PDKLAA-YYTVWKVFDVLLRLMAPFTPYIAEEIY 800 Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 24/138 (17%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQN 64 K Y Y + H+G A+ II D++ RF + G +V G D HG I K Q Sbjct: 41 KYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVRRQPGFDMHGLPIEVKVEQA 100 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL---------WKKISD 115 G+ TK ++ +I D+FI+ ++ + +I+ W + Sbjct: 101 LGLKTKKDIET------------EIGVDNFIKKCKEFALNNLKIMTEQFKMLGIWMDWDN 148 Query: 116 KGDIYKGCY--SGWYSLR 131 K Y SGW++L+ Sbjct: 149 PYMTIKNEYIESGWFTLK 166 >gi|323466819|gb|ADX70506.1| Valyl-tRNA synthetase [Lactobacillus helveticus H10] Length = 879 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 113/269 (42%), Gaps = 41/269 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+L ++ + ER + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLENQKTDGKVNFVPERFEGTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D +++P + Sbjct: 419 NKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTNSEDFKRYFPTNA 477 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314 V G DI+ F W + ++ +L K + +LH +G K+SKSLGN +DP+ Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372 +V+++ G DALR+FL+ A G+D YD L N N I N SR V M L Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPSDA 590 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F SD I + + E+ Sbjct: 591 KPAHMPDVSKFDLSDRWIFDRLNHTVSEV 619 Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 S I PN + H+GHA++ I D L RF R+ G D L+ G D G Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAG 86 >gi|41615024|ref|NP_963522.1| hypothetical protein NEQ230 [Nanoarchaeum equitans Kin4-M] gi|40068748|gb|AAR39083.1| NEQ230 [Nanoarchaeum equitans Kin4-M] Length = 1016 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 128/264 (48%), Gaps = 17/264 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 ++ VW+D+ + T DN + K F+P D + G D +R F+++ L + Sbjct: 588 VLDVWLDSGGAFYAT---FDNEEAYKI-FYPFDFILEGWDQIRGWFYSLLGEGVLYTNQS 643 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K V+ GF+L +G K+SKSLGN I E++E+ G DA+R F ++ +D Sbjct: 644 PY-KNVYVSGFVLDEQGRKMSKSLGNFIYARELMEKYGADAVRLFTIQATGPYQDLILRI 702 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 DG+K++ + N + N+V K+Y + P P D+ ++ ++ ++E Sbjct: 703 DGIKEKQSN--LNILYNIVKYYFDQ--KEYLKVNPEPKKLNIVDQYVIYKINKAIEETIN 758 Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV----EVIRQLA 459 +N I +A + E+ R++ ++K+ D A+T+LYV ++IR +A Sbjct: 759 YFENYQIWKAPKPLEEFWLELSRFYIKVNRERIEKSKDD-AATILYVLKYSLDKLIRAIA 817 Query: 460 ILLQAFVPKLANKIFDILFVADEN 483 ++ L K+ D L +E+ Sbjct: 818 PIIPFSAEYLYQKMRDELGYKEES 841 >gi|254518604|ref|ZP_05130660.1| valyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] gi|226912353|gb|EEH97554.1| valyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] Length = 880 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 117/238 (49%), Gaps = 21/238 (8%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLG 308 F+P ++ V G DI+ F W A ++ + + K V HG I +G K+SKSLG Sbjct: 478 FYPTNVLVTGYDIIFF----WVARMIFSGIHNMDKTPFDTVLIHGIIRDSQGRKMSKSLG 533 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSV 366 N +DP+EVI+E G DALR+ LV + G D Y + +RV A + AN + N SR V Sbjct: 534 NGVDPLEVIDEYGADALRFMLVTGNSPGNDIRY----IPERVEAARNFANKMWN-ASRFV 588 Query: 367 SMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423 M L K+ ++ +D+ ILS + +++E+ ENM+ + AL +V + Sbjct: 589 MMNLDKEVMDKYADCKEYSLADKWILSRMNTLVKEVTENMEKYELGIALQKVYDFMWTEF 648 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 D Y + K L + + V V +V++ LL +P + +I+ L D Sbjct: 649 CDWYIELVKG-VLYGDDEKQKGIVYNVLNDVLKTGLKLLHPVMPFITEEIYTTLTDGD 705 >gi|221633490|ref|YP_002522715.1| valyl-tRNA synthetase [Thermomicrobium roseum DSM 5159] gi|221157072|gb|ACM06199.1| valyl-tRNA synthetase [Thermomicrobium roseum DSM 5159] Length = 892 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 31/283 (10%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 +I DP ++ W + +T G+ D+ D + F+P + G DIL +W A Sbjct: 448 RIEQDPD-VLDTWFSSGLWPFSTLGWPDDTDDLR-YFYPGSVMETGYDIL----FFWVAR 501 Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++ L +V + LH +G+++SK+ GNVIDP EV ++ G DALR+ LV Sbjct: 502 MVFLGLEFMGEVPFYTVYLHGTVRDERGQRMSKTKGNVIDPTEVTQQYGADALRFTLVTM 561 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM-----ILKDYDGMIPTP--GAFTE 385 G D + ++ N AN I N ++ + I + DG + +P A + Sbjct: 562 AGPGTDMKLSLNRVEASRN--FANKIWNATRYTLRVLAGGEIEQAPDGSVVSPERSAMSL 619 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD- 442 +D ILS RV E+ + ++ H A + + D Y +A K + +P Sbjct: 620 ADRWILSRLERVTTEVTDQLERYQFHEAGHLLYDFLWSQFCDWYIEASKV-AINAGDPGA 678 Query: 443 RAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 RA+ T+ YV +R LL F+P + +++ L A E+ Sbjct: 679 RAARQTLAYVLERALR----LLHPFMPFVTEELWQRLPHAGES 717 >gi|28211899|ref|NP_782843.1| valyl-tRNA synthetase [Clostridium tetani E88] gi|75541792|sp|Q891R5|SYV_CLOTE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|28204342|gb|AAO36780.1| valyl-tRNA synthetase [Clostridium tetani E88] Length = 880 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 76/259 (29%), Positives = 125/259 (48%), Gaps = 22/259 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D + + F+P D+ G DI+ F W A ++ + L Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTEDLEY-FYPTDVLATGYDIIFF----WVARMIFSGLHN 505 Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-G 339 +P K V HG + +G+K+SKSLGN +DP+EVI++ G DALR+ L+ A G D Sbjct: 506 MKEIPFKTVLIHGIVRDSEGKKMSKSLGNGVDPLEVIDKYGADALRFMLITGNAPGNDIR 565 Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVL 398 FY++ R + AN I N SR V M L K+ + +D ILS + V+ Sbjct: 566 FYEERVESAR---NFANKIWN-ASRYVMMNLDKNLMEKYKDCKDYNIADTWILSRLNEVI 621 Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY-VTVEVI 455 +E+ +N++ + A +V + D Y + KP + ++A V + V V+ Sbjct: 622 KEVTDNIEKFELGMASQKVYDFMWNEFCDWYIELSKP--VLYGEDEKAKGVTFNVLFNVL 679 Query: 456 RQLAILLQAFVPKLANKIF 474 LL +P + +IF Sbjct: 680 TSGLKLLHPIMPFITEEIF 698 >gi|300856628|ref|YP_003781612.1| valyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] gi|300436743|gb|ADK16510.1| valyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] Length = 882 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 76/269 (28%), Positives = 130/269 (48%), Gaps = 24/269 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D + K F+P + V G DI+ F W A ++ + L Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTEDLKC-FYPNNTLVTGYDIIFF----WVARMIFSGLYC 505 Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +P + V HG + +G K+SKSLGN +DPIEVI+E G DALR+ L+ A G D Sbjct: 506 MDDIPFENVLIHGIVRDSQGRKMSKSLGNGVDPIEVIDEYGADALRFTLITGNAPGNDIR 565 Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSM-ILKDYDGMIPTPGAFTESDESILSVCSRV 397 Y +RV A + AN I N SR V M I +D ++ +D I+S + + Sbjct: 566 Y----YPERVEASRNFANKIWN-ASRFVLMNIDEDLMSKYKDCKDYSGADRWIMSKLNTL 620 Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 ++E+ +N++ + A ++ + D Y + KP + ++A V Y + + Sbjct: 621 VKEVTDNIEKFELGIASQKLYDFIWGELCDWYIELVKP--VMYGEDEKAKGVAYNVLNNV 678 Query: 456 RQLAI-LLQAFVPKLANKIFDILFVADEN 483 ++ LL +P + +I+ L+ E+ Sbjct: 679 LSTSLQLLHPVMPFITEEIYTHLYTEYES 707 >gi|182416784|ref|ZP_02948179.1| valyl-tRNA synthetase [Clostridium butyricum 5521] gi|237667221|ref|ZP_04527205.1| valine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379364|gb|EDT76861.1| valyl-tRNA synthetase [Clostridium butyricum 5521] gi|237655569|gb|EEP53125.1| valine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 880 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 19/230 (8%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308 F+P + V G DI+ F W A ++ + L + H ++H +G K+SKSLG Sbjct: 478 FYPNSVLVTGHDIIFF----WVARMIFSGLHCMGETPFHTVLIHGLIRDSQGRKMSKSLG 533 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 N +DP+EVI++ G DALR+ + A G D Y + ++ N AN I N SR V M Sbjct: 534 NGVDPLEVIDQYGADALRFMIATGNAPGNDMRYYPERVESSRN--FANKIWN-ASRFVMM 590 Query: 369 IL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425 L K+ ++ +D+ ILS + +++E+ ENM+ + A+++V + D Sbjct: 591 NLDKEIMNKYKDCKEYSLADKWILSEMNTLVKEVTENMEKYELGIAMSKVYDFMWTEFCD 650 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI-LLQAFVPKLANKIF 474 Y + KP + ++A V Y + + + LL +P + +I+ Sbjct: 651 WYIELIKP--VFYGEDEKAKGVAYNVLNTVLVTGLKLLHPAMPFITEEIY 698 >gi|85859788|ref|YP_461990.1| valyl-tRNA synthetase [Syntrophus aciditrophicus SB] gi|85722879|gb|ABC77822.1| valyl-tRNA synthetase [Syntrophus aciditrophicus SB] Length = 887 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 94/386 (24%), Positives = 155/386 (40%), Gaps = 49/386 (12%) Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189 L+++ Y E Y G+ Y + + ++ ++ +F R+ +S I+P Sbjct: 328 LKEQGYLVSVEPYMHNVGKCYRCKTDIEPYVSKQ-WFVRIKPLAKAAISAVVKGKTRIIP 386 Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDP----------- 224 ++ + ++D +SR+ + WG +IP DP Sbjct: 387 PMWEATYYEWMNN-IRDWCISRQIW-WGHRIPVWTCESCGRMIVSTQDPDACPDCGSNEL 444 Query: 225 ---QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281 + ++ W + +T G+ D K F+P L + G DIL F W A ++ Sbjct: 445 RQEEDVLDTWFSSALWPFSTLGWPDRTPALKT-FYPTSLLITGFDILFF----WVARMMM 499 Query: 282 ANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 + K V LH KGEK+SKS GN IDP+++I++ G DA R+ L A Sbjct: 500 MGKYIMKDVPFRDVYLHALVRDEKGEKMSKSKGNSIDPLDMIDKYGTDAFRFTLAAFSAQ 559 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES--DESILSV 393 G+D ++ ++ N I N +R M L+DY G +S D ILS Sbjct: 560 GRDVRMSEERIEG--YKFFVNKIWN-AARFSLMNLEDYPAEGAAAGREEKSLKDRWILSR 616 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451 R E+ ++ + A A V S D Y + KP K P+ Sbjct: 617 LQRTTAEVVRSLDEYRFNDAAAAVYSFFWHEFCDWYLELIKPTLYGKETPEERMAAQLTL 676 Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477 EV++ LL F+P + +I+ L Sbjct: 677 KEVLKNGLKLLHPFMPFITEEIWQKL 702 >gi|292655697|ref|YP_003535594.1| isoleucyl-tRNA synthetase [Haloferax volcanii DS2] gi|291371634|gb|ADE03861.1| isoleucyl-tRNA synthetase [Haloferax volcanii DS2] Length = 1043 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 26/272 (9%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWP 276 ++PD + VWID+ + T G LD P + A + WPADL + D R +W Sbjct: 522 RVPD----VFDVWIDS---SVATWGTLDFPGETDAYDELWPADLIIEAHDQTR--GWFWS 572 Query: 277 AFLL--SANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 + +A P K+V HGF K G K+SKS+GN++ P E I+ G D LR +L+ Sbjct: 573 QLGMGTAATGESPYKEVIMHGFANDKDGRKMSKSVGNIVTPEEAIDRAGRDPLRAYLLSH 632 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESD 387 G D ++ DGL + N N+ + + D DG P + G T D Sbjct: 633 DQQGVDLSFEWDGLADTQST--LNIFWNVFRFPLPYM--DLDGYDPAEADLSAGELTVVD 688 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 E +LS V E+ + + + AL ++ +++ F + E D AS + Sbjct: 689 EWVLSRLQTVEAEMADAWDDYEVSTALNTLLDFITKDVSRFYVKAIRERMWDEEDSASKL 748 Query: 448 -LYVTVEVIRQLAI-LLQAFVPKLANKIFDIL 477 Y T+ + +I L+ + P +A +++ L Sbjct: 749 GAYATLSTVLSESIRLIAPYAPYMAERMYQRL 780 >gi|150016655|ref|YP_001308909.1| valyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] gi|149903120|gb|ABR33953.1| valyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] Length = 881 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 111/230 (48%), Gaps = 19/230 (8%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLG 308 F+P V G DI+ F W A ++ + L + V HG I +G K+SKSLG Sbjct: 479 FYPTSTLVTGHDIIFF----WVARMIFSGLHCMGETPFNTVLIHGLIRDSQGRKMSKSLG 534 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 N +DP+EVIE G DALR+ + A G D Y + ++ N AN I N SR V M Sbjct: 535 NGVDPLEVIETYGADALRFMIATGNAPGNDMRYYPERVESSRN--FANKIWN-ASRFVMM 591 Query: 369 IL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425 L K+ ++ +D+ ILS + +++E+ ENM+ + A+ +V + D Sbjct: 592 NLDKEVMNKYKDCKEYSLADKWILSEMNTLIKEVTENMEKYELGIAMQKVYDFMWTEFCD 651 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI-LLQAFVPKLANKIF 474 Y + KP + ++A ++Y + + + LL +P + +IF Sbjct: 652 WYIELVKP--VFYGEDEKAKGIVYNVLNTVLITGLKLLHPAMPFITEEIF 699 >gi|149911110|ref|ZP_01899737.1| leucyl-tRNA synthetase [Moritella sp. PE36] gi|149805860|gb|EDM65849.1| leucyl-tRNA synthetase [Moritella sp. PE36] Length = 864 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/256 (27%), Positives = 110/256 (42%), Gaps = 18/256 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+ARF R+ G +VL G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARFQRMQGKNVLQPIGWDAFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N + L YD I T ++ + + K+ +KG +YK Sbjct: 92 KNNTAPAPWTYENIDYMKGQLTSLGFGYDWKREIATCTPEYYRWEQEFFTKLFNKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY-- 179 S + DE +++V DG + PV+ E +F +++ Y D+LL+ Sbjct: 152 KTSSVNWCPNDETVLANEQV---NDGCCWRCD-TPVEQKEIPQWFIKITEYADELLTSID 207 Query: 180 -YESHPEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 + PE + ++R R+E I F G D +LS+ + PD + YV I Sbjct: 208 DLDGWPEQVKTMQRNWIGRSEGIELDFTVEGESDAALSKLSV--YTTRPDTVMGVTYVGI 265 Query: 233 DALTNYLTTTGYLDNP 248 A + L T L NP Sbjct: 266 -AAGHPLATKAALTNP 280 >gi|196039248|ref|ZP_03106554.1| valine--tRNA ligase [Bacillus cereus NVH0597-99] gi|196029875|gb|EDX68476.1| valine--tRNA ligase [Bacillus cereus NVH0597-99] Length = 881 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|163791284|ref|ZP_02185698.1| valyl-tRNA synthetase [Carnobacterium sp. AT7] gi|159873425|gb|EDP67515.1| valyl-tRNA synthetase [Carnobacterium sp. AT7] Length = 877 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 20/198 (10%) Query: 217 GIKIPDDPQYIMY------VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P+D + M W + +T G+ D +++P + V G DI+ F Sbjct: 427 GMEAPEDSENWMQDPDVLDTWFSSALWPFSTMGWPDEESEDFKRYFPTNTLVTGYDIIFF 486 Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ +L K V HG I +G K+SKSLGN IDP++VIE+ G DA Sbjct: 487 ----WVSRMMFQSLEFTGKRPFNNVLIHGLIRDTEGRKMSKSLGNGIDPMDVIEKYGADA 542 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAF 383 LR+FL A G+D + D + N N I N SR M ++D+ I G Sbjct: 543 LRWFLSNGSAPGQDVRFSYDKMDAAWN--FINKIWN-ASRFALMNMEDFTVDQIDLTGEK 599 Query: 384 TESDESILSVCSRVLQEI 401 T +D IL+ + ++++ Sbjct: 600 TVADRWILTKLNETVEKV 617 Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 18/110 (16%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 38 SVVIPPPNVTGKLHLGHAWDTTLQDIIVRQKRMQGYDTLWLPGMDHAG-----IATQAKV 92 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHHDTCRILWKKIS 114 K+ D SR D+ + FI T ++ + R W K+ Sbjct: 93 EAKLAEDGISR--------YDLGREKFIDTVWDWKEEYASVIREQWAKVG 134 >gi|257874768|ref|ZP_05654421.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC20] gi|257808934|gb|EEV37754.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC20] Length = 881 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 23/276 (8%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D + +++P + V G DI+ F Sbjct: 431 GLEAPADAENWQQDPDVLDTWFSSALWPFSTMGWPDETNEDFQRYFPTNTLVTGYDIIFF 490 Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ +L K V HG I +G K+SKSLGN IDP+EVIE+ G DA Sbjct: 491 ----WVSRMIFQSLEFTGKRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMEVIEQYGADA 546 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAF 383 LR+FL A G+D + + + N N I N SR V M + + I G Sbjct: 547 LRWFLSNGSAPGQDVRFSYEKMDAAWN--FINKIWN-ASRFVLMNVSEMTAEDIDFSGEK 603 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 + +D IL+ + ++++ + + A Q+ + + + D Y + K L N Sbjct: 604 SVADRWILTRLNETIEKVTDLFERFEFGEAGRQLYNFIWDDFCDWYIEMSKE-TLYGDNE 662 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + V V+ Q+ LL +P + +I+ L Sbjct: 663 AAKQVNKSILVHVLDQILRLLHPIMPFVTEEIWSKL 698 Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDTLWLPGMDHAGIATQAKVEEKLR 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FV+Q + + LD S + F T + + R Sbjct: 102 EQGISRYDLGREKFVEQVWDWKEEYAGHIREQWAKIGLSLDYSRERF--TLDDGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G Y W A + + ++K +G +Y+ + Sbjct: 160 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 207 >gi|119775714|ref|YP_928454.1| leucyl-tRNA synthetase [Shewanella amazonensis SB2B] gi|119768214|gb|ABM00785.1| leucyl-tRNA synthetase [Shewanella amazonensis SB2B] Length = 864 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 18/255 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+ARF RL G +VL G D G AA Sbjct: 37 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDAFGLPAENAAI 96 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 97 KNATAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 156 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 + + D+ +++V DG + PV+ E +F +++AY ++LL+ Sbjct: 157 KTSAVNWCPNDQTVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 212 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 E PE + ++R R+E + +KD S +FD PD + YV I A Sbjct: 213 NLEGWPEQVKTMQRNWIGRSEGVEMTFK-VKD---SDDSFDIYTTRPDTVMGVTYVAI-A 267 Query: 235 LTNYLTTTGYLDNPD 249 + L L+NP+ Sbjct: 268 AGHPLAEKAALNNPE 282 >gi|126697211|ref|YP_001092097.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301] gi|126544254|gb|ABO18496.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301] Length = 918 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 75/294 (25%), Positives = 138/294 (46%), Gaps = 30/294 (10%) Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269 + K F IK+ D ++ W + +T G+ + D K++P + V G DI+ Sbjct: 455 ANKKFGLNIKLVRDKD-VLDTWFSSGLWPFSTLGWPNTNDPDFKKWYPNSVLVTGFDIIF 513 Query: 270 FHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGV 322 F W A + + N+P K V+ HG + +K+SKS GN IDPI +I++ G Sbjct: 514 F----WVARMTMMGNTFTNNIPF-KDVYIHGLVRDENNKKMSKSSGNGIDPILLIDKYGS 568 Query: 323 DALRYFLVREIA-CGKDGFYDKDGLKKRVNA-DLANGIGNLVSRSVSMILKDYDGMIPTP 380 DALR+ L+RE+A G+D D D K + + + N + + +L + Sbjct: 569 DALRFALIREVAGAGQDIRLDFDRKKDTSSTVEASRNFANKLWNATKFVL--INKTSNNN 626 Query: 381 GAFTESDESILSVCSR----VLQEIRENMQNQLIHRALAQVISLVSE------VDRYFD- 429 +F ESDE+ L +C + L ++ + L L + L+ E D Y + Sbjct: 627 YSFNESDENSLELCDKWILSKLNQVNIKVTALLKEYKLGESAKLLYEFTWNDFCDWYVEF 686 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 A++ + K+T + S V ++V+ + +++ F+P + +++ +L + +N Sbjct: 687 AKQRFNNKETKNRQISE--KVLIKVLNDILVMIHPFMPHITEELWHVLQLKPDN 738 Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust. Identities = 16/32 (50%), Positives = 21/32 (65%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 H+GHA+ + DV+ RF RL G +VL GTD Sbjct: 57 HMGHAFNTALIDVVVRFQRLLGKNVLCLPGTD 88 >gi|167770372|ref|ZP_02442425.1| hypothetical protein ANACOL_01715 [Anaerotruncus colihominis DSM 17241] gi|167667694|gb|EDS11824.1| hypothetical protein ANACOL_01715 [Anaerotruncus colihominis DSM 17241] Length = 879 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 95/387 (24%), Positives = 163/387 (42%), Gaps = 56/387 (14%) Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189 L D + E YK G Y + ++ + +F ++ + S +P Sbjct: 334 LEDGGFLKAVEPYKHNVGSCYRC-GSVIEPRVSKQWFVKMEPLAKPAVEAVRSGRTRFIP 392 Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQYI-------- 227 ER +++ +KD +SR+ + WG +IP + PQ Sbjct: 393 -ERFDKIYFNWMENIKDWCISRQLW-WGHRIPAWYCTGCGEMIVSRETPQTCPKCGSHRL 450 Query: 228 ------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281 + W + +T G+ D+ + F+P D V G DI+ F W A ++ Sbjct: 451 EQDPDTLDTWFSSALWPFSTLGWPDDTPELRY-FYPTDTLVTGYDIIFF----WVARMIF 505 Query: 282 ANL------PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 + L P K V HG + +G K+SKSLGN IDP+E+I+ G DALR+ L + Sbjct: 506 SGLAHMDEAPF-KTVLIHGLVRDAQGRKMSKSLGNGIDPLEIIDRYGADALRFTLATGNS 564 Query: 335 CGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 G D + + +VNA + AN I N SR + M L D D P D+ +LS Sbjct: 565 PGNDMRFSDE----KVNASRNFANKIWN-ASRFILMNLSD-DVEPGLPETLNIEDKWVLS 618 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYV 450 +++E+ +N++ + A+ ++ + ++ D Y + K + + + V Sbjct: 619 KYRTLVREVTDNLEKFELGLAVQKLYDFIWDILCDWYIELCK--SRLQAGGETSEAAQRV 676 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477 V V+ LL F+P + +I+ L Sbjct: 677 LVYVMTGTLKLLHPFMPFITEEIWQAL 703 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 6/67 (8%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN + H+GHA + + D+L R+ R+ G + L+ GTD KI +A + Sbjct: 47 TIVIPPPNITGRLHMGHALDETLQDILIRWRRMQGYEALWLPGTDHASIATEAKIVEAMR 106 Query: 64 NAGVTTK 70 GVT + Sbjct: 107 QEGVTKE 113 >gi|218778354|ref|YP_002429672.1| valyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01] gi|218759738|gb|ACL02204.1| Valyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01] Length = 888 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 80/347 (23%), Positives = 147/347 (42%), Gaps = 48/347 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F + +K + E+ I+P ++ + ++D +SR+ + WG +IP Sbjct: 361 WFVKAGPLAEKAIKAVETKKTRIVPEVWEKTYFEWLYN-IRDWCISRQIW-WGHRIPAWT 418 Query: 222 -----------DDPQY-------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257 +DP ++ W + +T G+ D KA ++P Sbjct: 419 CQDCGEIMVRMEDPDKCTCGSTNLEQESDVLDTWFSSALWPFSTMGWPDQTQLLKA-YYP 477 Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFIL-HKGEKISKSLGNVI 311 + + G DIL F W A ++ L +P K V+ H + +G+K+SKS GNVI Sbjct: 478 TSVLITGFDILFF----WVARMMMMGLQFMDDVPFKDVYIHALVRDEEGKKMSKSKGNVI 533 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMI 369 DP+EVIE G DA R+ L A G+D KR+ N + N +++ + Sbjct: 534 DPLEVIESQGTDAFRFTLASFAAMGRDIKLS----VKRIEGYRHFINKLWNAARFTLTNV 589 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427 + D + D ILS ++V+ ++ E+++ + A + V D Y Sbjct: 590 ENNPDAAAKASKSRAIPDRWILSRLNQVILQVEESLEAYQFNEAANILYKFVWHEFCDWY 649 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 +A KP ++ + + + V++ +LL F+P + +I+ Sbjct: 650 LEAIKPILYREGAQEERNATVATLQRVLKDAIVLLHPFIPFVTEEIW 696 >gi|125625212|ref|YP_001033695.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363] gi|124494020|emb|CAL99020.1| ValS protein [Lactococcus lactis subsp. cremoris MG1363] gi|300072022|gb|ADJ61422.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000] Length = 880 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 46/278 (16%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDENSADFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K H ++H +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGKSPFHNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + D + N N I N VSR + M +D S +++ S ++V + Sbjct: 559 FSYDKMDAAWN--FINKIWN-VSRYILMNAEDV------------SADAVSSALTKVANK 603 Query: 401 IRENMQNQLIHRALAQVISLVSE-VDRY-------------FDAQKPWELKKT-----NP 441 N+ ++ I L + V+E +D++ +D W L+ T Sbjct: 604 TAGNVTDRWILTRLNDTVERVTEQMDKFEFGVAGHILYNFIWDEFANWYLELTKEVMFGE 663 Query: 442 DRASTVLY--VTVEVIRQLAILLQAFVPKLANKIFDIL 477 D A + V + V+ Q+ LL +P +IF+ L Sbjct: 664 DEAEKDITRAVLLHVLDQVLRLLHPIMPFFTEEIFEKL 701 Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 23/164 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+A Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVAARLA 99 Query: 64 NAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 G+ + + D+ + ++ + IS D+ R T ++ R Sbjct: 100 EDGILPQDLGREKFLDKVWEWKDEYATTIKEQWGKMGISV-DYSRERFTLDEGLSQAVRK 158 Query: 109 LWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYN 151 ++ ++ +KG IY+G W A + + ++K DG +Y+ Sbjct: 159 VFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIHKEIDGAFYH 202 >gi|189083227|sp|A1S8S8|SYL_SHEAM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS Length = 859 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 18/255 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+ARF RL G +VL G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDAFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 92 KNATAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 + + D+ +++V DG + PV+ E +F +++AY ++LL+ Sbjct: 152 KTSAVNWCPNDQTVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 E PE + ++R R+E + +KD S +FD PD + YV I A Sbjct: 208 NLEGWPEQVKTMQRNWIGRSEGVEMTFK-VKD---SDDSFDIYTTRPDTVMGVTYVAI-A 262 Query: 235 LTNYLTTTGYLDNPD 249 + L L+NP+ Sbjct: 263 AGHPLAEKAALNNPE 277 >gi|302380657|ref|ZP_07269122.1| valine--tRNA ligase [Finegoldia magna ACS-171-V-Col3] gi|303233692|ref|ZP_07320346.1| valine--tRNA ligase [Finegoldia magna BVS033A4] gi|302311600|gb|EFK93616.1| valine--tRNA ligase [Finegoldia magna ACS-171-V-Col3] gi|302495126|gb|EFL54878.1| valine--tRNA ligase [Finegoldia magna BVS033A4] Length = 872 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 87/352 (24%), Positives = 153/352 (43%), Gaps = 38/352 (10%) Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 H V+ + + +F ++ L Y+ +P ++++++ ++D +SR+ Sbjct: 349 HTTVEPLISKQWFVKMDKLAKLALDAYKKEEIRFIPKRFEKVYVNWLEN-IRDWCISRQL 407 Query: 214 FDWGIKIP--------------DDPQYIMYV--------WIDALTNYLTTTGYLDNPDGS 251 + WG ++P ++P Y W + +T G+ + Sbjct: 408 W-WGHRLPVYYHNETGEVVVARENPDQQKYTQDPDTLDTWFSSALWPFSTLGWPHETEDL 466 Query: 252 KAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLG 308 K F+P ++ V G DI+ F I + + +P K V+ G + +G K+SKSLG Sbjct: 467 KY-FFPTNVLVTGYDIIFFWVIRMVFSSLYNLGEVPF-KDVYLTGLVKDSQGRKMSKSLG 524 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDG-FYDKDGLKKRVNADLANGIGNLVSRSVS 367 N IDPIEVI++ G DALR+ L+ G D FY + K N + N + N SR V Sbjct: 525 NGIDPIEVIDQYGADALRFALITGNTPGNDSRFYME---KVEANRNFCNKLWN-ASRFVF 580 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--D 425 M +++ I E D+ I+S + V+ E+ N+ I A ++ V D Sbjct: 581 MNVEENVKNIDEVELQIE-DKWIISSLNNVIDEVSTNLNKYEIGIAAEKIYDFTWNVFCD 639 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y + KP L N + + V + + + LL F+P + +I+ L Sbjct: 640 WYIELVKP-RLYGDNAKLKESAISVLIYTLTNVIKLLHPFMPYITEEIYSYL 690 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 5/72 (6%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 H+GHA I D+L R +R+DG L+ GTD A A A V K+ + S+ Sbjct: 52 HLGHALNNTIQDILIRKNRMDGYSALWVPGTDH-----ASIATEAKVVNKLKEEGKSKES 106 Query: 81 RDMADVLDISYD 92 L+ S+D Sbjct: 107 LGRDGFLEASWD 118 >gi|227510169|ref|ZP_03940218.1| valyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190374|gb|EEI70441.1| valyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 893 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 99/203 (48%), Gaps = 27/203 (13%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D+ D K +++P D V G DI+ F Sbjct: 444 GMEAPKDAENWEQDPDVLDTWFSSALWPFSTMGWPDDTDDMK-RYFPTDTLVTGYDIIFF 502 Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ +L K V HG I +G K+SKSLGN IDP++VI++ G DA Sbjct: 503 ----WVSRMIFQSLEFTHRRPFKDVLLHGLIRDSQGRKMSKSLGNGIDPMDVIDKYGADA 558 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380 LR+FL G+D + D + N N I N SR V M L DG+ +P Sbjct: 559 LRWFLSVGGTPGQDLKFSYDKMDSAWN--FINKIWN-ASRYVIMNL---DGIEKPKLPDK 612 Query: 381 GAFTESDESILSVCSRVLQEIRE 403 + SD+ ILS + + E+ E Sbjct: 613 FEWQLSDKWILSRLNTTISEVSE 635 Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust. Identities = 36/168 (21%), Positives = 68/168 (40%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S + PN + H+GHA++ + D++ R R++G D L+ G D G K+ + Sbjct: 50 SIVLPPPNVTGKLHLGHAWDTTLQDMIIRKKRMEGYDTLWLPGMDHAGIATQAKVEAKLR 109 Query: 64 NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ F + + LD + F T +K R Sbjct: 110 EQGISRYDLGREKFVEKVWEWKDTFAATIKEQWAKLGLSLDYERERF--TLDKGLSKAVR 167 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G Y W A + + ++K G +Y+ ++ Sbjct: 168 RVFVDLYNKGLIYRGEYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 215 >gi|167636213|ref|ZP_02394517.1| valyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|170688689|ref|ZP_02879894.1| valyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|254687052|ref|ZP_05150910.1| valyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066] gi|254741600|ref|ZP_05199287.1| valyl-tRNA synthetase [Bacillus anthracis str. Kruger B] gi|167528434|gb|EDR91202.1| valyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|170667375|gb|EDT18133.1| valyl-tRNA synthetase [Bacillus anthracis str. A0465] Length = 881 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 82/349 (23%), Positives = 149/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K + + E + +P N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAIELQQKEEEKVTFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKS GN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSFGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q +LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMLLLHPFMPFVTEKIWQHL 700 Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|227513097|ref|ZP_03943146.1| valyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577] gi|227083672|gb|EEI18984.1| valyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577] Length = 893 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 98/203 (48%), Gaps = 27/203 (13%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D+ D K +++P D V G DI+ F Sbjct: 444 GMEAPKDAENWEQDPDVLDTWFSSALWPFSTMGWPDDTDDMK-RYFPTDTLVTGYDIIFF 502 Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ +L K V HG I +G K+SKSLGN IDP++VI++ G DA Sbjct: 503 ----WVSRMIFQSLEFTHRRPFKDVLLHGLIRDSQGRKMSKSLGNGIDPMDVIDKYGADA 558 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380 LR+FL G+D + D + N N I N SR V M L DG+ +P Sbjct: 559 LRWFLSVGGTPGQDLKFSYDKMDSAWN--FINKIWN-ASRYVIMNL---DGIEKPKLPDK 612 Query: 381 GAFTESDESILSVCSRVLQEIRE 403 SD+ ILS + + E+ E Sbjct: 613 SECQLSDKWILSRLNTTISEVSE 635 Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust. Identities = 36/168 (21%), Positives = 68/168 (40%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S + PN + H+GHA++ + D++ R R++G D L+ G D G K+ + Sbjct: 50 SIVLPPPNVTGKLHLGHAWDTTLQDMIIRKKRMEGYDTLWLPGMDHAGIATQAKVEAKLR 109 Query: 64 NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ F + + LD + F T +K R Sbjct: 110 EQGISRYDLGREKFVEKVWEWKDTFAATIKEQWAKLGLSLDYERERF--TLDKGLSKAVR 167 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G Y W A + + ++K G +Y+ ++ Sbjct: 168 RVFVDLYNKGLIYRGEYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 215 >gi|222056164|ref|YP_002538526.1| valyl-tRNA synthetase [Geobacter sp. FRC-32] gi|221565453|gb|ACM21425.1| valyl-tRNA synthetase [Geobacter sp. FRC-32] Length = 886 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 87/351 (24%), Positives = 150/351 (42%), Gaps = 49/351 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD-- 222 ++ ++ ++ L+ + I+P + N ++++ ++D +SR+ + WG +IP Sbjct: 362 WYVKVGPLAERALAAVKEGKTRIVPQQWENTYYEWMEN-IRDWCISRQIW-WGHRIPAWY 419 Query: 223 ------------DPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256 DP ++ W + +T G+ D A F+ Sbjct: 420 CDHCGEITVAKVDPVKCSKCGSDEIRQETDVLDTWFSSALWPFSTMGWPDRTP-ELATFY 478 Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFIL-HKGEKISKSLGNV 310 P + G DIL F W A ++ L ++V + H + +G+K+SKS GNV Sbjct: 479 PTSCLITGFDILFF----WVARMMMMGLHFMEEVPFVDVYIHALVRDAQGQKMSKSKGNV 534 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 IDP+ VI+ G DA R+ L A G+D ++ + N AN I N SR M L Sbjct: 535 IDPLTVIDSYGTDAFRFTLAAFAAQGRDIKLAEERIAGYRN--FANKIWN-ASRFAMMNL 591 Query: 371 K--DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE-VDR 426 + D D + + +D IL + E+ E++ + A A + SE D Sbjct: 592 EGFDPDAVKADELELSNADRWILYRLNETAGEVEESLNAYRFNDAAAALYRFTWSEFCDW 651 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y + K +L K + R +T Y+ V+ L LL F+P + +I+ L Sbjct: 652 YIELVKD-DLYKGDSTRQTTARYILWMVLEHLLRLLHPFMPFITEEIWQAL 701 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 S I PN H+GHA + D+L R+ R+ G +VL+ GTD G Sbjct: 41 SIVIPPPNITGVLHMGHALNNTLQDILCRWKRMQGFNVLWMPGTDHAG 88 >gi|116513122|ref|YP_812029.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] gi|116108776|gb|ABJ73916.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] Length = 880 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 46/278 (16%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDENSADFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K H ++H +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGKSPFHNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + D + N N I N VSR + M +D S +++ S ++V + Sbjct: 559 FSYDKMDAAWN--FINKIWN-VSRYILMNAEDV------------SADAVSSALTKVANK 603 Query: 401 IRENMQNQLIHRALAQVISLVSE-VDRY-------------FDAQKPWELKKT-----NP 441 N+ ++ I L + V+E +D++ +D W L+ T Sbjct: 604 TAGNVTDRWILTRLNDTVERVTEQMDKFEFGVAGHILYNFIWDEFANWYLELTKEVMFGE 663 Query: 442 DRASTVLY--VTVEVIRQLAILLQAFVPKLANKIFDIL 477 D A + V + V+ Q+ LL +P +IF+ L Sbjct: 664 DEAEKDITRAVLLHVLDQVLRLLHPIMPFFTEEIFEKL 701 Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 23/164 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+A Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVAARLA 99 Query: 64 NAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 G+ + + D+ + ++ + IS D+ R T ++ R Sbjct: 100 EDGILPQDLGREKFLDKVWEWKDEYATTIKEQWGKMGISV-DYSRERFTLDEGLSQAVRK 158 Query: 109 LWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYN 151 ++ ++ +KG IY+G W A + + ++K DG +Y+ Sbjct: 159 VFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIHKEIDGAFYH 202 >gi|303238222|ref|ZP_07324758.1| tRNA synthetase class I (M) [Acetivibrio cellulolyticus CD2] gi|302594268|gb|EFL63980.1| tRNA synthetase class I (M) [Acetivibrio cellulolyticus CD2] Length = 176 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 59/115 (51%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N HIGH ++ D+LAR+ RL G +V + +G+D HG I A G Sbjct: 3 VFIGGAWPYANGSLHIGHIAALLPGDILARYFRLKGYNVCYVSGSDCHGTPIQIRANKEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 V+ + ++ +F+ D L SYD + +T + H + + + + G IYK Sbjct: 63 VSPEQIANRYHNDFKGCFDKLGFSYDLYNQTNDPYHSSFVQDFFTNLLNSGYIYK 117 >gi|282883323|ref|ZP_06291917.1| valine--tRNA ligase [Peptoniphilus lacrimalis 315-B] gi|281296827|gb|EFA89329.1| valine--tRNA ligase [Peptoniphilus lacrimalis 315-B] Length = 879 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 90/358 (25%), Positives = 151/358 (42%), Gaps = 67/358 (18%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224 +F ++ L Y + I+P +R ++ ++D ++SR+ + WG ++P Sbjct: 361 WFVKMEPLAKPALEAYRNGELNIVP-QRFGKIYENWLLNIRDWNISRQLW-WGHRLP--- 415 Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAK------------------------------ 254 VW D NY+ + L++P+G + Sbjct: 416 -----VWYDQDGNYIVS---LEDPNGKEEYNKKTFTQDEDTLDTWFSSALWPFSTLGWPQ 467 Query: 255 -------FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK-GEKISK 305 F+P D+ V G DI+ F I L LP K V +G + + G K+SK Sbjct: 468 KTEDLDYFFPTDVLVTGYDIIFFWVIRMVFSSLEQMGQLPFKDVLLNGLVRDELGRKMSK 527 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSR 364 SLGN IDP++VI+E G DALR+ LV G D FY K R A+ + Sbjct: 528 SLGNGIDPLDVIDEYGADALRFTLVTGNTPGNDMRFYIKRVESSRNFANKLWNATRFIMM 587 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423 ++S + D + +I + D+ I+S + ++ I E + I A A + + Sbjct: 588 NLSDDISDSNFLI---DELQDQDKWIISKLEKTIKSITEKIDKYEIGLAAADIYDFIWSD 644 Query: 424 -VDRYFDAQKP---WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D Y + KP E +KTN + +L+V +++ LL F+P + +I+ L Sbjct: 645 FCDWYIEMVKPVLYSEGQKTNTQKV--LLFVLENILK----LLHPFMPFITEEIWQTL 696 >gi|193794438|gb|ACF21431.1| methionyl-tRNA synthetase [Actinomyces oris] Length = 168 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 4/167 (2%) Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 F+ +G+K S S G VI + ++ DALRYF+ D + +R N +L Sbjct: 1 FLTMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G GNLV+R+ SMI K + G IP D ++L + + + AL Sbjct: 61 VAGWGNLVNRTASMIHKRF-GQIPESAELEGIDRALLDAVEAGFTSVGDLIAQHRQKAAL 119 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458 + + LV E ++Y +P++LK +P R +TVL+ + + L Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166 >gi|255660428|ref|ZP_05405837.1| valyl-tRNA synthetase [Mycoplasma genitalium G37] Length = 757 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 97/355 (27%), Positives = 152/355 (42%), Gaps = 66/355 (18%) Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 V+ M + +F L +D L Y + +P+FI P +R N+ +S + LK +SR+ W Sbjct: 354 VEPMLSKQWFVDLPKLKDHL--YLKKYPDFI-P-KRFNKQVSNWLNKLKPWCISRQLI-W 408 Query: 217 GIKIPDDPQYIMYVWIDA--------------LTNYLTTTGYLDNPDGSKAKFWP----- 257 G KIP VW + L NY + LD S WP Sbjct: 409 GHKIP--------VWFENNTGEIVVGEKPSKNLQNYTRSKDVLDTWFSSS--LWPLICLN 458 Query: 258 ---------ADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISK 305 +L V G DIL F + + +F + LP K V HG + + K+SK Sbjct: 459 WEQDDSFHETELLVTGYDILFFWVLRMLFNSFFETKKLPF-KTVLIHGLVRDEQNRKMSK 517 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SL N IDP+++I G DA+R FL G D + + +K N N + N+ Sbjct: 518 SLNNGIDPVDLIRNYGADAVRLFLCSNHTPGDDLIFSEQKIKSAWN--FLNKLWNVTKFV 575 Query: 366 VSM-----ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 + + I D D + + S+ IL+ +V+Q+I + + ALA I + Sbjct: 576 IQLENDQEISYDLDKL-------SLSETWILAKLDKVIQKITKLLDK--FQLALANQILV 626 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIF 474 D + + E K P++ L+ T + V+ +AILL VP L+ +I+ Sbjct: 627 KFVWDDFCNTFI--EAIKKEPNQLKPQLFYTAKSVLSNIAILLSITVPFLSERIY 679 >gi|259907081|ref|YP_002647437.1| Putative Methionine-tRNA ligase [Erwinia pyrifoliae Ep1/96] gi|224962703|emb|CAX54158.1| Putative Methionine-tRNA ligase [Erwinia pyrifoliae Ep1/96] gi|283476882|emb|CAY72733.1| metG [Erwinia pyrifoliae DSM 12163] Length = 658 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 108/510 (21%), Positives = 200/510 (39%), Gaps = 45/510 (8%) Query: 4 REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKA 61 ++ L IST PN H+GH + + AD+ R+ L G+ TG D++ + A Sbjct: 114 KDTLIISTPPT-PNGDLHLGHLSGPYLGADIYRRYLTLKGVSARHLTGRDDNQTYVKCIA 172 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-TTEKRHHDTCRILWKKISDKGDIY 120 + +V D + ++ A DI+ D F T K ++ + ++ D+G I+ Sbjct: 173 TKEQRPPEEVANDYADKIYQTWAKA-DIALDFFSSPQTTKNYYSRVNSIIGRLYDRGFIF 231 Query: 121 KGCYSGWYSLRD-----EAYYND--DEVYKGADGQYYNAQH---------NPVQWMEEE- 163 Y L E Y + +DG NPV + E Sbjct: 232 AKEVDELYDLNTGFSLHEGYIKGVCPHCHSASDGNACEQCGRPNDCADLINPVASLPETR 291 Query: 164 -------GYFFRLSAYQDKL--LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 +FRLSA +L L++ + + R + GL D+ +S ++ Sbjct: 292 VGTRTTTKLYFRLSALAPQLTELTFRSN-----MSARARELTQGMLSDGLPDICISHRS- 345 Query: 215 DWGIK--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-LHVIGKDILRFH 271 DWGI IP ++YVW + YL L +P K D +H G D +H Sbjct: 346 DWGISVDIPGFEDQVLYVWFEMAAGYLAADEDL-HPQDPFFKNKNCDIIHFYGFDNTYYH 404 Query: 272 AIYWPA--FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 + +PA + L +P + + +GEK S S ++I +++ ++ VD +R+ L Sbjct: 405 TLLFPAIYYALDEEYNVPVNHVINELLYLRGEKFSTSRRHLIWASKLLSKIPVDYVRWGL 464 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 R + + + +N + + ++ S + + G +P PGA+T + Sbjct: 465 ARSRPEMTNENFSLEPFVDAINDFFVSTLQQHLTTSCRELSLQFQGKVPEPGAWTSQHAA 524 Query: 390 ILSVCSRVLQEIRENMQNQLI--HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 + +++ A A++ + ++F+AQ E + D T Sbjct: 525 FYQRIRNLARDVEHAYHIDAFSPQTATAKLEEMGILTRKFFNAQSKHETQPMLRDYQRTT 584 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + I+Q ++L Q + + + I +L Sbjct: 585 FALNFWAIKQFSLLSQPIMLEGSEYILKLL 614 >gi|30264526|ref|NP_846903.1| valyl-tRNA synthetase [Bacillus anthracis str. Ames] gi|47529989|ref|YP_021338.1| valyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187350|ref|YP_030602.1| valyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|65321827|ref|ZP_00394786.1| COG0525: Valyl-tRNA synthetase [Bacillus anthracis str. A2012] gi|165872012|ref|ZP_02216653.1| valyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167640706|ref|ZP_02398966.1| valyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|170708361|ref|ZP_02898805.1| valyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|177653987|ref|ZP_02936028.1| valyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190567025|ref|ZP_03019941.1| valyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|218905660|ref|YP_002453494.1| valyl-tRNA synthetase [Bacillus cereus AH820] gi|227817238|ref|YP_002817247.1| valyl-tRNA synthetase [Bacillus anthracis str. CDC 684] gi|229093554|ref|ZP_04224656.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|229600610|ref|YP_002868742.1| valine--tRNA ligase [Bacillus anthracis str. A0248] gi|254724614|ref|ZP_05186397.1| valyl-tRNA synthetase [Bacillus anthracis str. A1055] gi|254736562|ref|ZP_05194268.1| valyl-tRNA synthetase [Bacillus anthracis str. Western North America USA6153] gi|254754802|ref|ZP_05206837.1| valyl-tRNA synthetase [Bacillus anthracis str. Vollum] gi|81581271|sp|Q81LD3|SYV_BACAN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|30259184|gb|AAP28389.1| valine--tRNA ligase [Bacillus anthracis str. Ames] gi|47505137|gb|AAT33813.1| valyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181277|gb|AAT56653.1| valyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|164712302|gb|EDR17838.1| valyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167511278|gb|EDR86664.1| valyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|170126736|gb|EDS95619.1| valyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|172081042|gb|EDT66120.1| valyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190562016|gb|EDV15985.1| valyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|218536093|gb|ACK88491.1| valyl-tRNA synthetase [Bacillus cereus AH820] gi|227005238|gb|ACP14981.1| valine--tRNA ligase [Bacillus anthracis str. CDC 684] gi|228689884|gb|EEL43689.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|229265018|gb|ACQ46655.1| valine--tRNA ligase [Bacillus anthracis str. A0248] Length = 881 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 83/349 (23%), Positives = 149/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K + + E + +P N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAIELQQKEEEKVTFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|323339480|ref|ZP_08079759.1| valine--tRNA ligase [Lactobacillus ruminis ATCC 25644] gi|323093094|gb|EFZ35687.1| valine--tRNA ligase [Lactobacillus ruminis ATCC 25644] Length = 887 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 88/182 (48%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P D V G DI+ F W + ++ +L Sbjct: 453 VLDTWFSSALWPFSTMGWPDTESEDFKRYFPTDTLVTGYDIIFF----WVSRMIFQSLEF 508 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K V HG I +G K+SKSLGN IDP++VI++ G DALR+FL G+D Sbjct: 509 TGRRPFKHVLLHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSTGSTPGQDVR 568 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQ 399 + + N N I N SR V M L D +P + SD+ ILS ++ ++ Sbjct: 569 FSYTKMDAAWN--FINKIWN-ASRFVIMNLDDDTKAELPEKSEWQLSDKWILSRLNKTVK 625 Query: 400 EI 401 E+ Sbjct: 626 EV 627 Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 21/166 (12%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D+L R R+ G D L+ G D G K+ Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGFDTLWLPGMDHAGIATQAKVEARLA 101 Query: 64 NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109 G++ + FVD+ + A + L + YD T ++ R + Sbjct: 102 EQGISRYDLGREKFVDKVWEWKDEYASIIKQQWAKLGLSLDYDRERFTLDEGLSKAVRKV 161 Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQH 154 + + KG IY+G Y + + +D EV D G +Y+ ++ Sbjct: 162 FVSLYKKGLIYRGEYIINWDPKARTALSDIEVIHQDDKGAFYHVKY 207 >gi|301055965|ref|YP_003794176.1| valyl-tRNA synthetase [Bacillus anthracis CI] gi|300378134|gb|ADK07038.1| valyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI] Length = 881 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 83/349 (23%), Positives = 149/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K + + E + +P N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAIELQQKEEEKVAFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|228929504|ref|ZP_04092524.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228830184|gb|EEM75801.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 867 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 83/349 (23%), Positives = 149/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K + + E + +P N + ++++ + D +SR+ + WG +IP Sbjct: 350 WFVKMAPLAEKAIELQQKEEEKVTFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 467 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGHKMSKSLGNGIDP 523 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 524 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 87 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 146 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194 >gi|15674155|ref|NP_268330.1| valyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|81537370|sp|Q9CDP6|SYV_LACLA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|12725235|gb|AAK06271.1|AE006446_3 valyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] Length = 880 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 46/278 (16%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDENSADFIRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K H ++H +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGKSPFHNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + D + N N I N VSR + M +D S +++ S ++V + Sbjct: 559 FSYDKMDAAWN--FINKIWN-VSRYILMNAEDI------------SADAVSSALTKVANK 603 Query: 401 IRENMQNQLIHRALAQVISLVSE-VDRY-------------FDAQKPWELKKT-----NP 441 N+ ++ I L + V+E +D++ +D W L+ T Sbjct: 604 TAGNVTDRWILTRLNDTVERVTEQMDKFEFGVAGHILYNFIWDEFANWYLELTKEVMFGE 663 Query: 442 DRASTVLY--VTVEVIRQLAILLQAFVPKLANKIFDIL 477 D A + V + V+ Q+ LL +P +IF+ L Sbjct: 664 DEAEKDITRAVLLHVLDQVLRLLHPIMPFFTEEIFEKL 701 Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 23/164 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+A Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVAARLA 99 Query: 64 NAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 G+ + + D+ + ++ + IS D+ R T ++ R Sbjct: 100 EDGILPQDLGREKFLDKVWEWKDEYATTIKEQWGKMGISV-DYSRERFTLDEGLSQAVRK 158 Query: 109 LWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYN 151 ++ ++ +KG IY+G W A + + ++K DG +Y+ Sbjct: 159 VFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIHKEIDGAFYH 202 >gi|228917096|ref|ZP_04080654.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228935777|ref|ZP_04098589.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228823834|gb|EEM69654.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228842514|gb|EEM87604.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 867 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 83/349 (23%), Positives = 149/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K + + E + +P N + ++++ + D +SR+ + WG +IP Sbjct: 350 WFVKMAPLAEKAIELQQKEEEKVTFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 467 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 524 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 87 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 146 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194 >gi|313673271|ref|YP_004051382.1| valyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] gi|312940027|gb|ADR19219.1| valyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] Length = 874 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 23/261 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ P+ +K KF+P V G DIL F W A ++ Sbjct: 450 VLDTWFSSALWPFSTMGW---PEKNKTIEKFYPTSCLVTGFDILFF----WVARMIMMGQ 502 Query: 285 PLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 KK V+ H + + G+K+SKS GNVIDP+ +I++ G D+ R+ L A G+D Sbjct: 503 KFMKKEPFKHVYIHALVRDQYGQKMSKSKGNVIDPLVIIDKYGADSFRFTLASLAAQGRD 562 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398 +D ++ N N I N SR + M L Y P + D+ ILS+ Sbjct: 563 IKLSEDRIEGYRN--FVNKIWN-ASRFILMNLGGYKPKDPVLEKLNKEDKWILSMLKDTA 619 Query: 399 QEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 ++ + +++ + A ++ ++ D Y + K K N D A L V V++ Sbjct: 620 DDVAKAIESYNFNEAALKIYHFFWLNFCDWYIEFIKIRIFKNENKDEA---LDTAVYVLK 676 Query: 457 QLAILLQAFVPKLANKIFDIL 477 + I+L F+P + I+ ++ Sbjct: 677 KSLIILHPFMPFVTEYIYKLI 697 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 6/65 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN H+GHA + D+L R+H+L G + ++ GTD G + K Sbjct: 41 SIVIPPPNVTGSLHMGHALNNTLQDILIRYHKLIGFETMWIPGTDHAGIATQNVVEKMLH 100 Query: 64 NAGVT 68 + G+T Sbjct: 101 SEGLT 105 >gi|118479624|ref|YP_896775.1| valyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|196044847|ref|ZP_03112081.1| valyl-tRNA synthetase [Bacillus cereus 03BB108] gi|225866439|ref|YP_002751817.1| valyl-tRNA synthetase [Bacillus cereus 03BB102] gi|229186699|ref|ZP_04313858.1| Valyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|118418849|gb|ABK87268.1| valyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|196024335|gb|EDX63008.1| valyl-tRNA synthetase [Bacillus cereus 03BB108] gi|225789413|gb|ACO29630.1| valine--tRNA ligase [Bacillus cereus 03BB102] gi|228596802|gb|EEK54463.1| Valyl-tRNA synthetase [Bacillus cereus BGSC 6E1] Length = 881 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 83/349 (23%), Positives = 149/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K + + E + +P N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAIELQQKEEEKVTFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KFEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|254757634|ref|ZP_05209661.1| valyl-tRNA synthetase [Bacillus anthracis str. Australia 94] Length = 881 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 83/349 (23%), Positives = 149/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K + + E + +P N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAIELQQKEEEKVTFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|228925025|ref|ZP_04088154.1| tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228834602|gb|EEM80112.1| tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 545 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 87/367 (23%), Positives = 157/367 (42%), Gaps = 48/367 (13%) Query: 6 KLYISTAIA-YPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 K +I TA N HIGH + + ADV +RF ++ G +V+++T D+H IA A+ Sbjct: 2 KTFIVTATPPTTNGDLHIGHLSGPYLAADVFSRFQKMKGNNVIYSTSGDDHQTYIATTAK 61 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH-DTCRILWKKISDKG----- 117 G T + V+ ++ +D I+ + F + + H + ++KK+ +KG Sbjct: 62 RKGWTPEKLVEYYTKKVQDTLGAAFINLNIFSNSLNNQEHIKFVQSIFKKLYNKGVFVEK 121 Query: 118 ----DIYKGCYSGWYS--LRDEAYYNDDEVYKGADGQYYNAQH---------NPVQWMEE 162 C + ++ E + +++ A G A NPV + Sbjct: 122 QKEIHFCNNCDQYLFESFIKGECPFCNEK----ASGNLCEACGRINDPIELINPVCGLCG 177 Query: 163 E--------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 E G FF L Y+D+L+ YY S + ++ I V + D ++ T Sbjct: 178 ETPTISSYKGMFFPLENYRDQLVEYYNSRVSWRPHLKELCNWI--VSKPIPDYPVTYPT- 234 Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTG---YLDNPDGSKAKFWPAD---LHVIGKD 266 WGI +P + VW + ++ TT L++ + S + + +G D Sbjct: 235 KWGIPVPIKGYTNQCINVWFEMYPGHIATTNKWLQLNDSNFSVENLCENNATLVQFLGYD 294 Query: 267 ILRFHAIYWPA--FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324 F+A+ A F + LP+ + ++ F L + K S S + I ++++EV D+ Sbjct: 295 NSFFNAVLHVATCFAIDEGYLLPEHIITNEFYLLEHAKFSTSREHAIWGSDLLKEVPADS 354 Query: 325 LRYFLVR 331 LRY++ R Sbjct: 355 LRYYVCR 361 >gi|325473922|gb|EGC77110.1| valyl-tRNA synthetase [Treponema denticola F0402] Length = 909 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 91/387 (23%), Positives = 158/387 (40%), Gaps = 68/387 (17%) Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189 L + + ++E K A G Y H ++ + +F ++ K L ++ P Sbjct: 344 LEELGLFKNEEKIKHAVGCCYRC-HTSIEPYVSKQWFVKMQPLAQKALDAWKKGDVVFYP 402 Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------DDPQY----- 226 + N ++ + ++D +SR+ + WG +IP + P Sbjct: 403 QKWENTYAHWM-NNIRDWCISRQLW-WGHRIPVWYCTDCGKTNVSRTDITECPHCKSKNI 460 Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281 ++ W + +T G+ + A+F+P V G DI+ F W A ++ Sbjct: 461 KRDEDVLDTWFSSWLWPFSTLGWPKKTE-DLARFFPTSALVTGHDIIFF----WVARMIM 515 Query: 282 ANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 A+L K +F HG + K G K+SKSLGN IDP+ IEE G DA+++ L C Sbjct: 516 ASLQFTGKAPFKDIFIHGLVRDKQGRKMSKSLGNGIDPLVAIEEFGADAMKFTLT--FMC 573 Query: 336 G---KDGFYDKDGLKKRVNADLANGI--------GNLVSRSVSMILKDYDGMIPTPGAFT 384 G +D D + K + + AN + GNL R++ +++D + + Sbjct: 574 GSQSQDFLIDMESFK--LGSKFANKVWNASRYILGNLAGRTIVPVVRD-----GSQNSLK 626 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK---KT 439 E D I + Q +R ++ + + A +V D Y + K K + Sbjct: 627 ELDRWIYHELNEAAQTVRSSLDSYRYNEAAQKVYEFFWNNFCDWYVEGTK-LSFKYGDEK 685 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFV 466 DRA++VL +E +L AFV Sbjct: 686 EKDRAASVLLAVLEESLRLLHPFLAFV 712 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 17/89 (19%) Query: 2 KEREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 K+ K + I PN H+GHA + + DV+ R+HR+ G + L+ GTD Sbjct: 38 KKNTKNTFTVVIPPPNVTGVLHVGHALDETLQDVIVRYHRMKGDETLWIPGTD------- 90 Query: 60 KAAQNAGVTTKVFVDQN----SRNFRDMA 84 +AG+ T+ V++ +N RD+ Sbjct: 91 ----HAGIATQSVVEKKLKAEGKNRRDLG 115 >gi|312870463|ref|ZP_07730583.1| valine--tRNA ligase [Lactobacillus oris PB013-T2-3] gi|311094020|gb|EFQ52344.1| valine--tRNA ligase [Lactobacillus oris PB013-T2-3] Length = 883 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 14/197 (7%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P + V G DI+ F Sbjct: 434 GMEAPKDAENWEQDNDVLDTWFSSALWPFSTMGWPDTDSADFKRYFPTNTLVTGYDIIFF 493 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P K V HG I +G K+SKSLGN IDP++VI++ GVDALR+ Sbjct: 494 WVSRMIFQSLEFTGKAPF-KNVLLHGLIRDEQGRKMSKSLGNGIDPMDVIKKYGVDALRW 552 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386 FL+ G+D + +K + N I N SR V M L + ++P + + Sbjct: 553 FLITGSTPGQDIRFSY--IKMDAAWNFINKIWN-ASRYVIMNLGEMPAPVLPAKEKWDLA 609 Query: 387 DESILSVCSRVLQEIRE 403 D ILS + ++++ E Sbjct: 610 DRWILSRLNATIEQVTE 626 Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 21/166 (12%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G DVL+ G D G K+ + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDVLWIPGMDHAGIATQAKVEARLR 99 Query: 64 NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109 G++ + FV Q + AD+ + + YD T ++ + R + Sbjct: 100 KQGISRYDLGREKFVQQVWDWKDEYADIIHQQWAKMGISVDYDRERFTLDEGLNKAVRKV 159 Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + + KG IY+G Y W A + + V+K G +Y+ ++ Sbjct: 160 FVDLYKKGLIYRGTYIINWDPQARTALSDIEVVHKDDQGAFYHVKY 205 >gi|320162142|ref|YP_004175367.1| valyl-tRNA synthetase [Anaerolinea thermophila UNI-1] gi|319995996|dbj|BAJ64767.1| valyl-tRNA synthetase [Anaerolinea thermophila UNI-1] Length = 902 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 74/276 (26%), Positives = 116/276 (42%), Gaps = 21/276 (7%) Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILRFHAIYWP 276 ++I DP ++ W + +T G+ +N PD F+P + G DIL F W Sbjct: 450 LRIEQDPD-VLDTWFSSGLWPFSTLGWPENTPD--LRYFYPTSVLETGYDILFF----WV 502 Query: 277 AFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 A ++ L +V H LH G+K+SKS GNV+DP+ V+ E+G DALR+ L+ Sbjct: 503 ARMIMMGLEFTGEVPFHTVYLHGLIRDEHGQKMSKSKGNVVDPLIVMNEMGTDALRFTLL 562 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 G D + K N + AN + N + R V L P +T +D I Sbjct: 563 VGSTPGND--VNLSLKKVEANRNFANKLWN-IGRFVLSALDQAPTQAEKPAEWTLADSWI 619 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVL 448 + +++E+ Q+ A Q+ D Y + K + DRA Sbjct: 620 WARLQNLIREVERLFQSYQYGEAGRQIYEFTWGEFADWYLEIAK--QQLAQGGDRAYWTA 677 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 Y V+ LL F P + +++ L A E + Sbjct: 678 YTLTRVLDACLRLLHPFTPFVTEELWGYLKRACEEK 713 Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust. Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 24/133 (18%) Query: 12 AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNA 65 +I PN + H+GHA + + D++ R+HR+ G+ L+ GTD G ++ K + Sbjct: 50 SIPPPNVTGELHLGHAMFVSMEDLMIRYHRMKGVPTLWVPGTDHAGIATQLQVEKMLASE 109 Query: 66 GVTTKVFVDQN----------------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109 G+T + + +R R + D + F T ++ R Sbjct: 110 GLTRDMLGREGFLKRAWEWKNKYGGIITRQIRRLGASCDWDRERF--TLDEGLSRAVREA 167 Query: 110 WKKISDKGDIYKG 122 + ++ +KG IY+G Sbjct: 168 FVRLYEKGLIYRG 180 >gi|161484946|ref|NP_713943.2| valyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] gi|90101529|sp|Q8EZT8|SYV_LEPIN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|293386243|gb|AAN50961.2| valyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] Length = 882 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 31/276 (11%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 ++ DP ++ W + +T G+ D + K +++P + V G DI+ F W + Sbjct: 442 EVEPDPD-VLDTWFSSQLWPFSTLGWPDQTEDLK-RYYPTSVLVTGFDIIFF----WVSR 495 Query: 279 LLSANL-----PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++ + P KV HG + K G+K SKS+GNVIDP+ ++++ G D+ R+FL Sbjct: 496 MIMMGMKFMQAPPFHKVLIHGLVRDKDGKKFSKSVGNVIDPLVMMDKYGTDSFRFFLAAT 555 Query: 333 IACGKDGFYDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGA---F 383 + GKD +D+ DG + N I N SR + M L+ + +P TP Sbjct: 556 LPEGKDILFDESRLDGYR-----SFCNKIWN-SSRFILMNLE--ESFVPIGITPDIEKDL 607 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNP 441 D+ ILS + L+E + + A + + D Y + KP K +P Sbjct: 608 EPMDQWILSRFNHCLEEYNKAHSKFHFYEMAAAIYEFIWGDFCDWYIELVKPRAYGKVSP 667 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A V +V+ + LL F+P L ++ + Sbjct: 668 RSAEVAKQVLSDVLIRALGLLHPFMPFLTEEVHSVF 703 >gi|45656371|ref|YP_000457.1| valyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|81407853|sp|Q72V30|SYV_LEPIC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|45599605|gb|AAS69094.1| valyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 882 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 31/276 (11%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 ++ DP ++ W + +T G+ D + K +++P + V G DI+ F W + Sbjct: 442 EVEPDPD-VLDTWFSSQLWPFSTLGWPDQTEDLK-RYYPTSVLVTGFDIIFF----WVSR 495 Query: 279 LLSANL-----PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++ + P KV HG + K G+K SKS+GNVIDP+ ++++ G D+ R+FL Sbjct: 496 MIMMGMKFMQAPPFHKVLIHGLVRDKDGKKFSKSVGNVIDPLVMMDKYGTDSFRFFLAAT 555 Query: 333 IACGKDGFYDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGA---F 383 + GKD +D+ DG + N I N SR + M L+ + +P TP Sbjct: 556 LPEGKDILFDESRLDGYR-----SFCNKIWN-SSRFILMNLE--ESFVPIGITPDIEKDL 607 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNP 441 D+ ILS + L+E + + A + + D Y + KP K +P Sbjct: 608 EPMDQWILSRFNHCLEEYNKAHSKFHFYEMAAAIYEFIWGDFCDWYIELVKPRAYGKVSP 667 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A V +V+ + LL F+P L ++ + Sbjct: 668 RSAEVAKQVLSDVLIRALGLLHPFMPFLTEEVHSVF 703 >gi|239637538|ref|ZP_04678510.1| valyl-tRNA synthetase [Staphylococcus warneri L37603] gi|239596756|gb|EEQ79281.1| valyl-tRNA synthetase [Staphylococcus warneri L37603] Length = 876 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 18/261 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDVDAEDFKRYFPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL A G+D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSAPGQDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVL- 398 Y + ++ N N I N S+ I +D++ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNAARFSLMNIGEDFNVEDIDLSGNLSLADKWILTRLNETIA 616 Query: 399 --QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 ++ + + + RAL I D Y + K + + D+ T V V+ Sbjct: 617 TVTDLSDKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNGEDEDQKQTTRSVLSYVLD 674 Query: 457 QLAILLQAFVPKLANKIFDIL 477 ++ +L F+P + KI+ L Sbjct: 675 RIMRMLHPFMPFVTEKIWQSL 695 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 38 TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG 85 >gi|21229069|ref|NP_634991.1| isoleucyl-tRNA synthetase [Methanosarcina mazei Go1] gi|74522709|sp|Q8PSV9|SYI_METMA RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|20907621|gb|AAM32663.1| Isoleucyl-tRNA synthetase [Methanosarcina mazei Go1] Length = 1058 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 73/263 (27%), Positives = 122/263 (46%), Gaps = 22/263 (8%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287 VW D+ T + D ++WPAD G D R F++ + + P Sbjct: 523 VWFDSAVASWATLKFPQTRDQFD-EWWPADFITEGHDQTRGWFYSQLGASMVGFGRAPY- 580 Query: 288 KKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 K V HGF L G +K+SKSLGNVI P+++I G D LR +++ A D ++ + + Sbjct: 581 KSVLMHGFTLDAGGKKMSKSLGNVISPLDIIGRFGADTLRAYVLSSSAPWDDLKFNLEEV 640 Query: 347 KKRVNADLANGIGNLVSRSVS-MILKDYDGMI----PTPGAFTESDESILSVCSRVLQEI 401 + + N + N+ + M L ++D M A E D ILS V++ + Sbjct: 641 ETIHRS--INILWNVFRFPLPYMALDNFDPMQVSLDSVRDALREEDRWILSRAQSVVKSV 698 Query: 402 RENMQNQLIHRALAQVISLVSE-VDRYFDA---QKPWELKKTNPDR--ASTVLYVTVEVI 455 E M L+H+A+ +++ E + R++ + W + +PD+ A VLY EV Sbjct: 699 DEAMSGYLLHKAVREILDFTLEDLSRWYIQLIRPRTW-TEADDPDKLAAYCVLY---EVY 754 Query: 456 RQLAILLQAFVPKLANKIFDILF 478 + L+ F+P LA +++ L Sbjct: 755 VTITKLISPFMPYLAEEMYQNLI 777 >gi|259502839|ref|ZP_05745741.1| valine-tRNA ligase [Lactobacillus antri DSM 16041] gi|259169206|gb|EEW53701.1| valine-tRNA ligase [Lactobacillus antri DSM 16041] Length = 883 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 14/197 (7%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P + V G DI+ F Sbjct: 434 GMEAPQDAENWEQDSDVLDTWFSSALWPFSTMGWPDTDSADFKRYFPTNTLVTGYDIIFF 493 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P K V HG I +G K+SKSLGN IDP++VI++ GVDALR+ Sbjct: 494 WVSRMIFQSLEFTGKAPF-KNVLLHGLIRDEQGRKMSKSLGNGIDPMDVIKKYGVDALRW 552 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386 FL+ G+D + + N N I N SR V M L + +P + + Sbjct: 553 FLITGSTPGQDIRFSYTKMDAAWN--FINKIWN-ASRYVIMNLGEMPAPQLPAKDKWDLA 609 Query: 387 DESILSVCSRVLQEIRE 403 D ILS + ++++ E Sbjct: 610 DRWILSRLNATIEQVTE 626 Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 21/166 (12%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G DVL+ G D G K+ + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDVLWVPGMDHAGIATQAKVEARLR 99 Query: 64 NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109 G++ + FV Q + AD+ + + YD T ++ + R + Sbjct: 100 KQGISRYDLGREKFVQQVWDWKDEYADIIHQQWAKLGISVDYDRERFTLDEGLNKAVRKV 159 Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + + KG IY+G Y W A + + V+K G +Y+ ++ Sbjct: 160 FVDLYKKGLIYRGTYIINWDPQARTALSDIEVVHKDDQGAFYHVKY 205 >gi|294629342|ref|ZP_06707902.1| valyl-tRNA synthetase [Streptomyces sp. e14] gi|292832675|gb|EFF91024.1| valyl-tRNA synthetase [Streptomyces sp. e14] Length = 874 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 7/178 (3%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284 ++ W + +T G+ + + S AKF+P + V G DIL F F L A Sbjct: 454 VLDTWFSSGLWPFSTLGWPERTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 512 Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P + HG + + G+K+SKS GN ++P++ +++ G DALR+ L R G D + Sbjct: 513 PPFHTIALHGMVRDQFGKKMSKSFGNAVNPLDWMDKYGSDALRFTLARGANPGVDVPIGE 572 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 D ++ N AN I N +R M DG +P P A + +D ILS + V+ E+ Sbjct: 573 DWVQGSRN--FANKIWN-ATRFALMNGATVDGPLPEPSAMSATDRWILSRLNSVVAEV 627 >gi|242214731|ref|XP_002473186.1| predicted protein [Postia placenta Mad-698-R] gi|220727688|gb|EED81599.1| predicted protein [Postia placenta Mad-698-R] Length = 397 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 86/387 (22%), Positives = 153/387 (39%), Gaps = 71/387 (18%) Query: 5 EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGL------DVLFTTGTDEHGQK 57 E + I++A+ Y N PH+G+ + AD+ AR HR + L+ GTDE+G Sbjct: 7 ENVLITSALPYCNNVPHLGNIIGSTLSADIFARAHRSHRMLGTRNRRTLYICGTDEYGTA 66 Query: 58 IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117 A G+T K D+ + + +S+D F RT+ H + C+ ++ + G Sbjct: 67 TETQALKEGITPKELCDKYNALHVETYKWFQLSFDHFGRTSTPLHTEICQEIYLNLLKNG 126 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN--------------------- 151 + K Y + D V + GAD + Sbjct: 127 YLDKQIKEQTYCEGCSKFLADRFVEGTCPHCGADDARGDQCDVCSRTLDAVDLINPRCLI 186 Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYES-------HPEFILPIERRNEVI-SFVKSG 203 ++ + V + +L A Q K+ + P ++ E E+I + +K+G Sbjct: 187 SKAHTVTTRSSAHMYVKLDALQPKVEEWIRKSWKDGKWSPNAVINAE--GELIDARLKAG 244 Query: 204 LKDLSLSRKTFDWGIKIP----DDPQ----YIMYVWIDALTNYLTTTG---------YLD 246 ++ ++R WG+ +P +D Q ++YVW DA Y + T + + Sbjct: 245 MRPSPVTRD-LTWGVPVPVVEGEDDQGMKGKVLYVWFDAPIGYPSITANYTSEWKQWWFN 303 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKIS 304 PD +F +GKD + FH I+WP+ + P + + ++ ++G K S Sbjct: 304 KPDVRLYQF-------MGKDNVYFHTIFWPSIQIGDGRPWTTLYHLSTTEYLNYEGGKFS 356 Query: 305 KSLG-NVIDPIEVIEEVGVDALRYFLV 330 KS V P + RY+L+ Sbjct: 357 KSHNRGVFGPAARETGIPPSVWRYYLI 383 >gi|12045191|ref|NP_073002.1| valyl-tRNA synthetase [Mycoplasma genitalium G37] gi|1351181|sp|P47576|SYV_MYCGE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|3844913|gb|AAC71557.1| valyl-tRNA synthetase [Mycoplasma genitalium G37] gi|166078837|gb|ABY79455.1| valyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0] Length = 837 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 97/355 (27%), Positives = 152/355 (42%), Gaps = 66/355 (18%) Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 V+ M + +F L +D L Y + +P+FI P +R N+ +S + LK +SR+ W Sbjct: 354 VEPMLSKQWFVDLPKLKDHL--YLKKYPDFI-P-KRFNKQVSNWLNKLKPWCISRQLI-W 408 Query: 217 GIKIPDDPQYIMYVWIDA--------------LTNYLTTTGYLDNPDGSKAKFWP----- 257 G KIP VW + L NY + LD S WP Sbjct: 409 GHKIP--------VWFENNTGEIVVGEKPSKNLQNYTRSKDVLDTWFSSS--LWPLICLN 458 Query: 258 ---------ADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISK 305 +L V G DIL F + + +F + LP K V HG + + K+SK Sbjct: 459 WEQDDSFHETELLVTGYDILFFWVLRMLFNSFFETKKLPF-KTVLIHGLVRDEQNRKMSK 517 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 SL N IDP+++I G DA+R FL G D + + +K N N + N+ Sbjct: 518 SLNNGIDPVDLIRNYGADAVRLFLCSNHTPGDDLIFSEQKIKSAWN--FLNKLWNVTKFV 575 Query: 366 VSM-----ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 + + I D D + + S+ IL+ +V+Q+I + + ALA I + Sbjct: 576 IQLENDQEISYDLDKL-------SLSETWILAKLDKVIQKITKLLDK--FQLALANQILV 626 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIF 474 D + + E K P++ L+ T + V+ +AILL VP L+ +I+ Sbjct: 627 KFVWDDFCNTFI--EAIKKEPNQLKPQLFYTAKSVLSNIAILLSITVPFLSERIY 679 >gi|293376478|ref|ZP_06622707.1| valine--tRNA ligase [Turicibacter sanguinis PC909] gi|325842048|ref|ZP_08167585.1| valine--tRNA ligase [Turicibacter sp. HGF1] gi|292644900|gb|EFF62981.1| valine--tRNA ligase [Turicibacter sanguinis PC909] gi|325489770|gb|EGC92126.1| valine--tRNA ligase [Turicibacter sp. HGF1] Length = 878 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 73/287 (25%), Positives = 125/287 (43%), Gaps = 19/287 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + TT G+ D ++P D V G DI+ F W + ++ +L Sbjct: 445 VLDTWFSSALWPFTTLGWPDVECEDFKAYFPTDTLVTGYDIIFF----WVSRMIFQSLEF 500 Query: 287 P-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K V HG + +G K+SKSLGN +DP++VIE+ G D+LRYFL A G+D Sbjct: 501 TDERPFKNVLIHGLVRDAEGRKMSKSLGNGVDPMDVIEKYGADSLRYFLTTNSAPGQDLR 560 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVL 398 Y ++ ++ N N I N SR V M L+ + + +D+ IL + + Sbjct: 561 YIEEKVESTWN--FINKIWN-ASRFVIMNLEGMTVEDVCLQAATLNVADKWILGRLNETI 617 Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 + I N + + + E + Y + K L+ + + + V V+ Sbjct: 618 EAINYNADKFEFGEVGRHLYNFIWEDFCNWYIEMAK-LPLQGEDEEAKRSTRMVLTYVLE 676 Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503 + LL F+P + +I+ ++ + C + +KP F KT Sbjct: 677 SIVKLLHPFMPFVTEEIYQMI-TRENTACAVAAWPVVKPEFNDAKTM 722 Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust. Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 40 TIVIPPPNVTGKLHLGHAWDTSLQDIIIRMKRMQGYDALWLPGMDHAGIATQAKVDARLK 99 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+++ + + M LD S + F T ++ R Sbjct: 100 EQGLSRYDIGREAFLEKAWEWKEEYAGFIRQQWEKMGLSLDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G W A + + ++K +G +Y+ ++ Sbjct: 158 RVFVQLYEKGLIYRGERIINWDPAARTALSDIEVIHKEIEGAFYHFKY 205 >gi|300361442|ref|ZP_07057619.1| valine--tRNA ligase [Lactobacillus gasseri JV-V03] gi|300354061|gb|EFJ69932.1| valine--tRNA ligase [Lactobacillus gasseri JV-V03] Length = 901 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 41/269 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ +++L ++ + ER ++ + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLAEEVLKNQKTDGKVNFVPERFEGTLNHWMEDVHDWVISRQLW-WGHRIPAWY 418 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D + +++P + Sbjct: 419 NKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTDNPDFKRYFPTNT 477 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPI 314 V G DI+ F W + ++ L KK V HG + +G K+SKSLGN +DP+ Sbjct: 478 LVTGYDIIFF----WVSRMIFQGLHFTKKRPFKDVVLHGLMRDEQGRKMSKSLGNGVDPM 533 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372 +V+++ G DALR+FL+ A G+D YD L N N I N SR V M L + Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLAAAWN--FINKIWN-ASRFVIMNLPEDA 590 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F +D I + + E+ Sbjct: 591 KPAHMPDTTQFDLADSWIFDRLNHTVSEV 619 Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L RF R++G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMEGYDTLYLPGMDHAGIATQAKVEAKLR 98 Query: 64 NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G + + FV Q + M LD S + F T +K R Sbjct: 99 KQGKDRHQMGREAFVKQVWDWKDEYANIIKGQWAKMGLSLDYSRERF--TLDKGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ ++G IY+G Y W A + + ++K G +Y+ ++ Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPELQTALSDIEVIHKDDKGAFYHVKY 204 >gi|323489964|ref|ZP_08095185.1| valyl-tRNA synthetase [Planococcus donghaensis MPA1U2] gi|323396260|gb|EGA89085.1| valyl-tRNA synthetase [Planococcus donghaensis MPA1U2] Length = 877 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 15/184 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ + D ++++P D V G DI+ F + + A + Sbjct: 445 VLDTWFSSALWPFSTLGWPEEND-DLSRYYPTDALVTGYDIINFWVSRMIFQALEFTGEK 503 Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K V HG + +G K+SKSLGN +DP++VI + G D+LRYFL + G+D Y Sbjct: 504 PF-KDVLIHGLVRDAEGRKMSKSLGNGVDPMDVISQYGADSLRYFLATASSPGQDLRYSN 562 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399 D ++ N AN I N SR L + +GM I G + +D IL+ + ++ Sbjct: 563 DKVESVWN--FANKIWN-ASR---FALMNMEGMTYDQIDLSGKKSVADSWILTRLNETIE 616 Query: 400 EIRE 403 ++ E Sbjct: 617 QVTE 620 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 E K + I PN + H+GHA++ + D++ R R+ G D L+ G D G IA Sbjct: 33 ESGKTPYTIVIPPPNVTGKLHLGHAWDTTLQDIMTRMKRMQGFDALWLPGMDHAG--IAT 90 Query: 61 AAQNAG 66 A+ G Sbjct: 91 QAKVEG 96 >gi|87301458|ref|ZP_01084298.1| t-RNA synthetase, class Ia:Valyl-tRNA synthetase [Synechococcus sp. WH 5701] gi|87283675|gb|EAQ75629.1| t-RNA synthetase, class Ia:Valyl-tRNA synthetase [Synechococcus sp. WH 5701] Length = 938 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 77/293 (26%), Positives = 123/293 (41%), Gaps = 33/293 (11%) Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYW 275 +++ DP ++ W + +T G+ D A ++P + V G DI+ F + Sbjct: 475 LQLEQDPD-VLDTWFSSGLWPFSTLGWPDESAADLATWYPTSVLVTGFDIIFFWVARMTM 533 Query: 276 PAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 A + +P V HG + K+SKS GN IDP+ +IE G DALR+ LVRE+A Sbjct: 534 LAGAFTGRMPF-ADVMIHGLVRDENNRKMSKSAGNGIDPLPLIERYGADALRFALVREVA 592 Query: 335 -CGKDGFYDKD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PGAFTES 386 G+D D D + A N + + L + G P P A T + Sbjct: 593 GAGQDIRLDYDRASGSSATVEAARNFANKLWNATRFALLNLGGETPASLGDPDPAALTLA 652 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEV-DRYFDAQKPWELKKTNPDRA 444 D ILS +RV +E E + + A + +EV D + K ++ NP A Sbjct: 653 DRWILSRLARVNRETAERYGSYGLGEAAKGLYEFAWNEVCDWTIELLK----RRLNPRPA 708 Query: 445 S--------------TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 + V +V+ +L +LL +P L+ +++ L A E Sbjct: 709 AEGEPLSNEALADQRVARQVLAKVLGELLVLLHPLMPHLSEELWHGLTGAPEG 761 Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 S I PN H+GH +E + D + RF RL G +VL GTD Sbjct: 49 SVVIPPPNVTGSLHMGHGFETALIDTIVRFQRLQGKNVLCLPGTD 93 >gi|227529668|ref|ZP_03959717.1| valyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540] gi|227350458|gb|EEJ40749.1| valyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540] Length = 885 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 23/273 (8%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P + V G DI+ F Sbjct: 436 GMEAPKDAENWEQDKDVLDTWFSSALWPFSTMGWPDTDSADFKRYFPTNTLVTGYDIIFF 495 Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ +L K V HG I +G K+SKSLGN IDP++VI++ GVDA Sbjct: 496 ----WVSRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGIDPMDVIKKYGVDA 551 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAF 383 LR+FL+ G+D + + N N I N SR V M L D ++P + Sbjct: 552 LRWFLITGSTPGQDIRFSYTKMDAAWN--FINKIWN-ASRYVIMNLGDMPAPVLPEKSKW 608 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 +D ILS + ++++ + A + + + D Y + K +L Sbjct: 609 DLADRWILSRLNATVKQVNAQFEKFEFGEAGRALYNFIWNDFCDWYIEMTKE-KLNNGTA 667 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + + + V+ Q+ L+ +P + K++ Sbjct: 668 EEQANTKNILGYVLDQILKLMHPIMPFVTEKLW 700 Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 21/166 (12%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G DVL+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGYDVLWLPGMDHAGIATQAKVEARLR 101 Query: 64 NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109 G++ + FV Q + AD+ + + YD T +K + R + Sbjct: 102 KQGISRYDLGREKFVQQVWDWKDEYADIIHKQWAKMGISVDYDRERFTLDKGLNKAVRKV 161 Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + + +KG IY+G Y W A + + ++K G +Y+ ++ Sbjct: 162 FVDLYNKGLIYRGTYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 207 >gi|119196555|ref|XP_001248881.1| hypothetical protein CIMG_02652 [Coccidioides immitis RS] Length = 1230 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 11/195 (5%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 EK Y+ YP+ H+GH I+DVLARF R+ G DVL G D G AA Sbjct: 353 EKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKRMKGYDVLHPMGWDAFGLPAENAAIE 412 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+ + +N ++ L +D +F+ + + + T R L+ + +KG Y+ Sbjct: 413 RGINPATWTKENIAKMKEQLKGLGTDFDWDREFMTCSPEFYKHTQR-LFLMLHEKGLAYQ 471 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177 Y D+ +++V A+G+ + + V+ E + +FFR++A+++ LL Sbjct: 472 AKAMVNYDPVDQTVLANEQV--DANGRSWRSGAV-VEKRELKQWFFRITAFKEALLKDLD 528 Query: 178 SYYESHPEFILPIER 192 S P+ IL ++R Sbjct: 529 SLASGWPDRILSMQR 543 >gi|57641683|ref|YP_184161.1| isoleucyl-tRNA synthetase [Thermococcus kodakarensis KOD1] gi|74506312|sp|Q5JJ31|SYI_PYRKO RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|57160007|dbj|BAD85937.1| isoleucyl-tRNA synthetase [Thermococcus kodakarensis KOD1] Length = 1065 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 82/338 (24%), Positives = 161/338 (47%), Gaps = 25/338 (7%) Query: 159 WMEEEGYFFRLSAYQD--KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 W E+G ++ + ++++ KL E + E I E E + ++ L L R D Sbjct: 474 WESEDGEYYVVGSFEELVKLAVAIEVNGERIDLPEGYEEKLKIIEEKLGPEDLHRPYVDA 533 Query: 217 GIKIPDDPQY-----IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKD-IL 268 I + + ++ VW D+ + + LD P + K WPAD V G+D + Sbjct: 534 FIIKVNGKEMKRVKDVVDVWFDS---GIASWASLDYPRNKELFEKLWPADFIVEGEDQVT 590 Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 ++ A +++ + + V HG++L KG+K+SKSLGN+I P EV+++ G D R+ Sbjct: 591 KWFYSQQAASVIAFDTVPYRAVAMHGYVLDEKGDKMSKSLGNIIRPEEVVQKEGRDPFRF 650 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDYD--GMIPTPGAFT 384 +++ ++ + GL++ + N + N+ S + M L +++ + P F Sbjct: 651 YMLWATNPWENLRFSWKGLEQ--VKRMLNILWNVYVLSATYMSLDNFNPTKVNPEELPFR 708 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYF---DAQKPWELKKTN 440 E D ILS + ++ E+ + ++ + RA + + V E + R++ ++ W ++ + Sbjct: 709 EEDRWILSRVNSLIGEVTDGIETFRLTRATRGIYNFVVEDLSRWYIRLIRKRMW-VEGDD 767 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 PD+ + Y +V L L+ F P +A +I+ L Sbjct: 768 PDKLAA-YYTVWKVFDVLLRLMAPFTPYIAEEIYQNLI 804 Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 7/86 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 K Y Y + H+G A+ II D++ RF + G +V G D HG I + A Sbjct: 41 KYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRSMQGYNVRRQPGFDMHGLPIEVKVEQA 100 Query: 66 -------GVTTKVFVDQNSRNFRDMA 84 + TK+ VD + ++ A Sbjct: 101 LKLKNKREIETKIGVDNFIKKCKEFA 126 >gi|193216447|ref|YP_001999689.1| fusion of oligopeptide transport protein OppF and Valyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1] gi|193001770|gb|ACF06985.1| fusion of oligopeptide transport protein OppF and Valyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1] Length = 1631 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 27/214 (12%) Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 ++ +++ +F +++ +LL+ + S F +R V+ + D ++SR+ + W Sbjct: 1138 IEILKQPQWFVKMNTLAKRLLADFNSGKGFKFIPDRFGSVLEKWMNNAHDWTISRQIW-W 1196 Query: 217 GIKIP--------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256 G +IP DP ++ W + G+ N K +++ Sbjct: 1197 GHRIPAWYKGKKIKVQEKSPGEGWVQDPD-VLDTWFSSALAPFVFLGWPQNLTLMK-RYF 1254 Query: 257 PADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313 P DL V DI+ F +Y+ + P K+VF HG + +G KISKSL N IDP Sbjct: 1255 PTDLLVTSYDIIFFWVARMYFQSLEFLNTKPF-KEVFIHGLLRDGQGRKISKSLRNGIDP 1313 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 I++IEE GVD L+ L+ + G+D Y +D +K Sbjct: 1314 IKIIEEHGVDVLKMSLIFNVTAGQDMNYGEDKIK 1347 Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 ++ KL + + PN + HIGHA + +I D + R+ +L DV++ G D G Sbjct: 818 DQSKLPFTIILPPPNVTGKLHIGHALDELIPDTIIRYKKLHNFDVMWVPGKDHAG 872 >gi|189218417|ref|YP_001939058.1| Leucyl-tRNA synthetase [Methylacidiphilum infernorum V4] gi|189185275|gb|ACD82460.1| Leucyl-tRNA synthetase [Methylacidiphilum infernorum V4] Length = 825 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 5/194 (2%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + K Y+ YP+ H+GH +D++AR+ R+ G +VL G D G + A Sbjct: 38 KPKFYVLDMFPYPSGSGLHVGHLEGYTASDIIARYKRMKGFNVLHPMGWDAFGLPAEQHA 97 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 G + QN NF+ + SYD I TT+ ++ + ++ ++ +KG Y Sbjct: 98 ILTGTHPALTTRQNIANFKRQIQAMGFSYDWSREINTTDPAYYKWTQWIFLRLFEKGLAY 157 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 WY + ++E+ DG ++PV +F +++AY +KLL Sbjct: 158 VAEAPVWYCPNLKTVLANEEIIHTPDGPRSERGNHPVIRKPFRQWFLKITAYAEKLLEGL 217 Query: 181 E--SHPEFILPIER 192 E PE I ++R Sbjct: 218 EKVQWPESIKEMQR 231 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/193 (23%), Positives = 91/193 (47%), Gaps = 24/193 (12%) Query: 249 DGSKAKFWPA----DLHVIGKDILRFHAIY---WPAFLLSANL---PLP-KKVFSHGFIL 297 K K+W + DL++ G + H +Y W L L P P ++ + G IL Sbjct: 524 SAEKEKYWMSPQGVDLYIGGAEHAVLHLLYARFWHKVLYDIGLVSTPEPFYRLVNQGVIL 583 Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 + +K+SKS GN+++P +I+E G D LR F + + + GL+ Sbjct: 584 GEDNQKMSKSRGNIVNPDAIIQEYGADTLRLFEMFLGPLQQSKPWSSKGLE--------- 634 Query: 357 GIGNLVSRSVSMIL-KDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 G ++R + + +D +GM + T + I + + + E+ ++++N H A Sbjct: 635 GPHRFLARVWRLFMDEDGEGMWVLRTDIVDEQPPLPIQKLQHKTVAEVTQDIENFQFHTA 694 Query: 414 LAQVISLVSEVDR 426 +A++++ V+E+ + Sbjct: 695 IAKLMTFVNELTK 707 >gi|116207612|ref|XP_001229615.1| hypothetical protein CHGG_03099 [Chaetomium globosum CBS 148.51] gi|88183696|gb|EAQ91164.1| hypothetical protein CHGG_03099 [Chaetomium globosum CBS 148.51] Length = 1117 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 109/502 (21%), Positives = 191/502 (38%), Gaps = 91/502 (18%) Query: 31 ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS 90 ADV ARF R GL ++ G+D++G A + GV + +D+ D + Sbjct: 524 ADVFARFCRARGLPTIYVCGSDQYGTATETKALSEGVDPATLCAKYHAIHKDIYDWFRLD 583 Query: 91 YDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-------- 142 +D F RT H + ++ ++ + G I + + Y ++ D V Sbjct: 584 FDVFGRTPTDEHTAIVQDIFTRLWNNGYIEQRETTQAYCPTHSSFLADRYVEGECSLCHD 643 Query: 143 KGADGQYYNAQHNPVQWMEEE------------GY---------------------FFRL 169 KGA G +A N + +E E G+ + RL Sbjct: 644 KGARGDQCDACGNLLDPLEPERDASGNQETKATGWLINPRCKLDGTAPEKRQTKHLYLRL 703 Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229 A Q ++ + ++ E + S++ GLK ++R WG+ IP Sbjct: 704 DALQGEIEEWLKTV-EKAWSANCVSITHSWLDQGLKPRGITRD-LKWGVPIPTG------ 755 Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NLPLP 287 +D L++ D +K F+ + FH I +PA L N Sbjct: 756 --LDGLSDE----------DYAKKVFY-----------VWFHTIIFPASQLGTKENWTKI 792 Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LRYFLVREIACGKDGFYDKDG 345 K V + ++ ++G K SKS G + + G+DA RY+L+ D + + Sbjct: 793 KAVSTCEYLNYEGGKFSKSKGVGVFGTNA-RDTGIDADIWRYYLLSRRPETSDSEFKWEE 851 Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405 N DL +GNL R + DG++P E D S + +E+ + + Sbjct: 852 FVDANNNDLLKNLGNLCQRIIKFCQAKMDGVVP------EYDLSKFPALQQHREEVEKLL 905 Query: 406 QNQLIH------RALAQVISLVSEVDRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 Q+ + H RA ++ +S + D + +L P+R V+ + + I Sbjct: 906 QDYVAHLKAVKLRAGLSIVMNISGLGNKLLQDNKLSNQLIAEEPERCRAVIGIALNHIHL 965 Query: 458 LAILLQAFVPKLANKIFDILFV 479 +A LL ++P+ + I L V Sbjct: 966 VAHLLSPYMPEKSQSILRQLGV 987 >gi|228968150|ref|ZP_04129153.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto str. T04001] gi|228791542|gb|EEM39141.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto str. T04001] Length = 116 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 55/99 (55%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66 ++I A Y N H+GH ++ D+LAR++R G +VL+ +G+D +G IA A+ G Sbjct: 3 IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105 VT K ++ F+ L +YD + RT + HH+T Sbjct: 63 VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHET 101 >gi|71894314|ref|YP_278422.1| valyl-tRNA synthetase [Mycoplasma synoviae 53] gi|90101534|sp|Q4A6B0|SYV_MYCS5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|71851102|gb|AAZ43711.1| valyl-tRNA synthetase [Mycoplasma synoviae 53] Length = 832 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 28/241 (11%) Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILHK- 299 +N D +++P+ L V G D++ F W + ++ +L K+VF HG I K Sbjct: 454 ENDDAFFKRYYPSSLMVSGYDLIFF----WISRMIFLSLEFTNQRPFKEVFMHGLIRDKD 509 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKSL N IDPIEV+E+ G DALR+FL+ A G D Y+++ ++ ++N + Sbjct: 510 GRKMSKSLNNGIDPIEVVEKYGSDALRWFLITNTAPGMDIRYNQEKIESA--WKISNKLY 567 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR-VLQEIRE-NMQNQLIHRALAQV 417 N+ SM P E+ S LS S+ +L ++ N Q Q + + Sbjct: 568 NVALYISSM-----------PDNNLEAKSSKLSEQSKWILNKLSALNKQIQKVFKTYDFS 616 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 I V F W ++ ++ + + V +++ I+L F+P ++ +F+ L Sbjct: 617 IIGVEIYQFIFTDLSSWYIELI---KSLNIKNEAMYVFKKILIMLHPFLPFTSDYLFNKL 673 Query: 478 F 478 + Sbjct: 674 Y 674 Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 PN + H+GHA + I D + RF +L G DVL+ G D G Sbjct: 41 PNVTGKLHLGHALDSYIPDTIIRFKKLSGYDVLWLPGMDHAG 82 >gi|269926588|ref|YP_003323211.1| valyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798] gi|269790248|gb|ACZ42389.1| valyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798] Length = 891 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 99/401 (24%), Positives = 170/401 (42%), Gaps = 87/401 (21%) Query: 152 AQHNPVQWMEEEGYFFRLSAYQ------DKLLSYYES--HPEFILPIER---------RN 194 A+ N V+ +EEEGY R+ Y D+ S E ++ L ++R RN Sbjct: 322 ARRNVVRRLEEEGYLVRVEDYTHSVAVCDRCESVIEPIISEQWFLRMDRLNKPALEVVRN 381 Query: 195 EVISFVKSGLK-----------DLSLSRKTFDWGIKIP---------------------- 221 E++ + K D +SR+ + WG +IP Sbjct: 382 EIVRMIPDRFKQIYINWVENEHDWCISRQLW-WGHRIPIWYCHDCGHTMATDQEMLERCE 440 Query: 222 --------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI--LRFH 271 DP ++ W + ++T G+ ++ D + F+P + G DI L H Sbjct: 441 KCGSTHIEQDPD-VLDTWFSSALWPMSTLGWPEDTDDLRY-FYPTSVMETGYDIIFLWVH 498 Query: 272 AIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 + + +P V+ HG + KG+++SK+ GNV+DP E+ E+ G DALR+ L+ Sbjct: 499 RMIFMGLHFMGEVPF-FDVYFHGTVRDEKGQRMSKTKGNVLDPTEITEQYGSDALRFALI 557 Query: 331 REIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSV-----SMILKDYDG-MIPTPGA 382 G D K G+ +RV A + AN I N + S I DG +PT Sbjct: 558 TSAPAGSDM---KLGI-QRVEAMRNFANKIWNATRYVIRACEDSQIETGPDGDPLPTSSE 613 Query: 383 -FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKT 439 T +D+ I+S R ++++ M+ +H A ++ + SE D Y ++ K Sbjct: 614 DATLADKWIISRLHRTIRDVTNMMERYQLHEAGRRLYDFIWSEYCDWYIESTKVVLAGDN 673 Query: 440 NPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 P + + T++YV +R LL ++P + +++ L Sbjct: 674 EPAKRAARQTLVYVLERALR----LLHPYMPFVTEELWHYL 710 Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust. Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 18/120 (15%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK----IAKAAQNAGVT-------- 68 H+GHA + + D+L R+ R+ G L+ G D G + K G+T Sbjct: 56 HMGHALFVTVEDILTRWRRMQGYPTLWLPGADHAGIAGQWVVEKELAAEGLTRHDLGREK 115 Query: 69 ----TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T ++++ R+ +L S D F T + R +K++ D+G IY+G Sbjct: 116 FLERTWDWMNRYRGRIREQLRILGASCDWSRFKFTMDPEPSRAVRTAFKRLYDEGLIYRG 175 >gi|49478642|ref|YP_038508.1| valyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|81394711|sp|Q6HD68|SYV_BACHK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|49330198|gb|AAT60844.1| valine--tRNA ligase (valyl-tRNA synthetase) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 881 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 83/349 (23%), Positives = 149/349 (42%), Gaps = 48/349 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K + + E + +P N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAIELQQKEEEKVTFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+R+FL A G+D + + ++ N N I N SR V M + D Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594 Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G + +D+ IL+ + ++ + NM A + + + + D Y + Sbjct: 595 KFEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654 Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 655 AK---LPLYGEDEAAKKTTRSILSYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|296810440|ref|XP_002845558.1| leucyl-tRNA synthetase [Arthroderma otae CBS 113480] gi|238842946|gb|EEQ32608.1| leucyl-tRNA synthetase [Arthroderma otae CBS 113480] Length = 980 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ YP+ H+GH I+DVLAR+ ++ G DVL G D G AA Sbjct: 75 KEMAYVLPMFPYPSGTLHMGHVRVYTISDVLARYKQMKGYDVLHPMGWDAFGLPAENAAI 134 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+ + + QN N +D L I + D + T + + L+ K+ +KG Y+ Sbjct: 135 ERGIHPEGWTKQNIANMKDQLKDLGIRFDWDAEVMTCAPEFYKHTQKLFLKLHEKGLAYQ 194 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177 Y D+ +++V A+G + + V+ E + +FFR++A+++ LL Sbjct: 195 AEALVNYDPVDKTVLANEQV--DANGCSWRSGAK-VEKRELKQWFFRITAFKEALLKDLD 251 Query: 178 SYYESHPEFILPIER 192 S S P+ IL ++R Sbjct: 252 SLSGSWPDRILTMQR 266 >gi|319790640|ref|YP_004152273.1| valyl-tRNA synthetase [Thermovibrio ammonificans HB-1] gi|317115142|gb|ADU97632.1| valyl-tRNA synthetase [Thermovibrio ammonificans HB-1] Length = 879 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 73/265 (27%), Positives = 111/265 (41%), Gaps = 29/265 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + G+ D D KA F+P DL V G DI+ F W A ++ Sbjct: 449 VLDTWFSSALWPFGVFGWPDETDDLKA-FYPTDLLVTGFDIIFF----WVARMMMMGYHF 503 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K V+ H + KG+K+SK+ GNVIDP+E++E+ G D LR+ L A G+D Sbjct: 504 TGKRPFADVYVHALVRDEKGQKMSKTKGNVIDPLEMVEKYGADTLRFTLTALAAQGRD-- 561 Query: 341 YDKDGLKKRVNADLANG---IGNLVSRSVSMILKDYDGMIPTPGAFTE---SDESILSVC 394 R++ + G N V +L D GA T D IL+ Sbjct: 562 -------IRLSERIIEGYRHFANKVWNVARFVLNAADAAAVEGGASTNYAPEDLWILTKL 614 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452 S QE+ ++ + A V + D Y + K K T +R T V + Sbjct: 615 SETAQEVDRALEGYRFNDAAKAVYQFIWNELADWYVEFTKHRLYKGTEQER-RTASQVLL 673 Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477 V+R+ LL +P + +I+ L Sbjct: 674 RVLREAMKLLHPIMPFITEEIYQKL 698 Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Query: 5 EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 EK S + PN H+GHA + DV+ R+ R++G +V + GTD G Sbjct: 37 EKPKFSVVLPPPNVTGVLHVGHALNSTLQDVICRWKRMNGYEVCWVPGTDHAG 89 >gi|189083230|sp|A9L001|SYL_SHEB9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|315268747|gb|ADT95600.1| leucyl-tRNA synthetase [Shewanella baltica OS678] Length = 859 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 17/240 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+ARF RL G +VL G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 N + +N ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 92 NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 S + DE +++V DG + PV+ E +F +++AY ++LL+ Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 + P+ + ++R R+E + ++ K+FD PD + YV I A Sbjct: 208 TLDGWPDQVKTMQRNWIGRSEGVEMTFG----VAGHDKSFDIYTTRPDTLMGVTYVAIAA 263 >gi|257457527|ref|ZP_05622694.1| valyl-tRNA synthetase [Treponema vincentii ATCC 35580] gi|257444913|gb|EEV19989.1| valyl-tRNA synthetase [Treponema vincentii ATCC 35580] Length = 900 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 92/413 (22%), Positives = 165/413 (39%), Gaps = 49/413 (11%) Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195 + E K A G Y HN V+ E +F ++ +K L+ ++ E + ++ Sbjct: 346 FKGKENIKHAVGHCYRC-HNVVEPYLSEQWFVKMHPLAEKALAAWKKG-ELVFYPQKWEN 403 Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIP------------------DDPQY----------I 227 S ++D +SR+ + WG +IP + P + Sbjct: 404 TYSHWMENIRDWCISRQLW-WGHRIPVWYCQDCGKMTVSVEDVTECPHCKSTALKQDNDV 462 Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANLP 285 + W + +T G+ + + K +++P + G DI+ F + A + +P Sbjct: 463 LDTWFSSWLWPFSTLGWPEKTEDFK-RYYPTSAVITGHDIIFFWVSRMIMAALEFTGTVP 521 Query: 286 LPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 + ++ HG + K G K+SKSLGN IDP+ +I+E G DAL++ L G+D D + Sbjct: 522 F-RDIYLHGLVRDKQGRKMSKSLGNGIDPLNIIDEYGADALKFTLTFMCTQGQDILIDNE 580 Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404 K + + AN I N SR + L+ + + TE D I + ++ +R Sbjct: 581 SFK--LGSRFANKIWN-ASRYILGNLEGRRIVSVSSSELTELDRWIYHTLNETVKNVRAA 637 Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAI 460 + + V D Y + K L N D A + + V + V+ + Sbjct: 638 FEGYRYNEVGQSVYEFFWNNFCDWYVEGTK---LSYKNGDEAEKNRITSVLLAVLEESLR 694 Query: 461 LLQAFVPKLANKIFDIL---FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 LL +P + +I+ L VA +R ++L P + + RF Sbjct: 695 LLHPVLPFVTEEIYRKLPENCVAGASRRAEALITADYPAYCEERIDTAAAARF 747 Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 25/163 (15%) Query: 12 AIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---------QKIAK 60 AI PN HIGH ++ DV+ R+HR+ G + L+ GTD G Q A+ Sbjct: 48 AIPPPNVTGVLHIGHGLNNVLQDVVIRYHRMKGDETLWLPGTDHAGIATQNVVERQLKAE 107 Query: 61 AAQNAGVTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109 + + F+ + + R + +D S + F T ++ R + Sbjct: 108 GKTRHDLGREAFLKRTWEVKEKHHAIITNQLRKIGASVDWSRERF--TMDEGLSHAVRTV 165 Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYN 151 + + ++G IY+G Y W A +D+ ++ G Y+ Sbjct: 166 FVSLYERGLIYRGNYLVNWCPSCGTALADDEVDHEDTKGGMYH 208 >gi|226311411|ref|YP_002771305.1| valyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] gi|226094359|dbj|BAH42801.1| valyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] Length = 890 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 77/261 (29%), Positives = 117/261 (44%), Gaps = 20/261 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + + K F+P ++ V G DI+ F W A ++ + L Sbjct: 458 VLDTWFSSGLWPFSTLGWPEESEDMKY-FYPTNVLVTGYDIIFF----WVARMMFSGLEF 512 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339 K V HG I +G K+SKSLGN +DP+EVIE+ G DALRY L + G D Sbjct: 513 TGKSPFESVLIHGIIRDSEGRKMSKSLGNGVDPMEVIEKYGADALRYTLATGNSPGNDQR 572 Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVL 398 FY + K N + AN I N SR M L D+ I G + D+ ILS + Sbjct: 573 FYWE---KVEANRNFANKIWN-ASRFALMNLTDFKYEEIDLSGELSTPDKWILSRLQATI 628 Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 ++ + + + + + D Y + K L T+ T V V V+ Sbjct: 629 ADVTRLSDAFEFGESGRVLYNFIWDDLCDWYIEMAK-LPLYGTDEAAKKTTQSVLVTVLD 687 Query: 457 QLAILLQAFVPKLANKIFDIL 477 Q LL F+P + +I+ L Sbjct: 688 QTLKLLHPFMPFITEEIWQAL 708 Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust. Identities = 33/168 (19%), Positives = 66/168 (39%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN + H+GHA + + D++ R R+ G LF G D G ++ + Sbjct: 48 TIVIPPPNVTGKLHLGHALDTTLQDIITRTKRMQGYSALFLPGMDHAGIATQARVEATLR 107 Query: 64 NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ ++ + + LD S + F T ++ R Sbjct: 108 EEGISRHDLGREKFVEKVWEWKHIYASHIREQWEKLGLALDYSRERF--TMDEGLSQAVR 165 Query: 108 ILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G W A + + +YK G ++ ++ Sbjct: 166 EVFVRLYEKGLIYRGNRIINWDPAARTALSDIEVIYKEVKGALHHMRY 213 >gi|116629854|ref|YP_815026.1| valyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] gi|238853954|ref|ZP_04644311.1| valine--tRNA ligase [Lactobacillus gasseri 202-4] gi|282851633|ref|ZP_06260998.1| valine--tRNA ligase [Lactobacillus gasseri 224-1] gi|311110508|ref|ZP_07711905.1| valine--tRNA ligase [Lactobacillus gasseri MV-22] gi|116095436|gb|ABJ60588.1| valyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] gi|238833399|gb|EEQ25679.1| valine--tRNA ligase [Lactobacillus gasseri 202-4] gi|282557601|gb|EFB63198.1| valine--tRNA ligase [Lactobacillus gasseri 224-1] gi|311065662|gb|EFQ46002.1| valine--tRNA ligase [Lactobacillus gasseri MV-22] Length = 879 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 41/269 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ +++L ++ + ER ++ + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLAEEVLKNQKTDGKVNFVPERFEGTLNHWMEDVHDWVISRQLW-WGHRIPAWY 418 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D + +++P + Sbjct: 419 NKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTDNPDFKRYFPTNT 477 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPI 314 V G DI+ F W + ++ L KK V HG + +G K+SKSLGN +DP+ Sbjct: 478 LVTGYDIIFF----WVSRMIFQGLHFTKKRPFKDVVLHGLMRDEQGRKMSKSLGNGVDPM 533 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372 +V+++ G DALR+FL+ A G+D YD L N N I N SR V M L + Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLAAAWN--FINKIWN-ASRFVIMNLPEDA 590 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F +D I + + E+ Sbjct: 591 KPAHMPDTTKFDLADSWIFDRLNHTVSEV 619 Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L RF R++G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMEGYDTLYLPGMDHAGIATQAKVEAKLR 98 Query: 64 NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G + + FV Q + M LD S + F T +K R Sbjct: 99 KQGKDRHQMGREAFVKQVWDWKDEYANIIKGQWAKMGLSLDYSRERF--TLDKGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ ++G IY+G Y W A + + ++K G +Y+ ++ Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPELQTALSDIEVIHKDDKGAFYHIKY 204 >gi|217972285|ref|YP_002357036.1| leucyl-tRNA synthetase [Shewanella baltica OS223] gi|254782513|sp|B8E4X7|SYL_SHEB2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|217497420|gb|ACK45613.1| leucyl-tRNA synthetase [Shewanella baltica OS223] Length = 859 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 17/240 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+ARF RL G +VL G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 N + +N ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 92 NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 S + DE +++V DG + PV+ E +F +++AY ++LL+ Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 + P+ + ++R R+E + ++ K+FD PD + YV I A Sbjct: 208 TLDGWPDQVKTMQRNWIGRSEGVEMTFG----VAGHDKSFDIYTTRPDTLMGVTYVAIAA 263 >gi|325957912|ref|YP_004289378.1| isoleucyl-tRNA synthetase [Methanobacterium sp. AL-21] gi|325329344|gb|ADZ08406.1| Isoleucyl-tRNA synthetase [Methanobacterium sp. AL-21] Length = 1060 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 77/283 (27%), Positives = 136/283 (48%), Gaps = 24/283 (8%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILR--FHAIY 274 ++PD ++ VWID+ Y P+ ++ +++P D G D R F++ Sbjct: 529 RVPD----VLDVWIDSGVAGWAALHY---PEETELFDEWYPYDFITEGHDQTRGWFYSQL 581 Query: 275 WPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 + + + P KKV HGF L +G+K+SKSLGNV++P EVIE G D LR++L+ Sbjct: 582 GCGVITNDSTPY-KKVLMHGFTLDEEGKKMSKSLGNVVEPEEVIELYGADVLRFYLLWGN 640 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTESDES--I 390 +D + D L K VN + N + N+ V + M + ++D TP DE I Sbjct: 641 KPWEDLKFVWDEL-KNVNK-MFNILWNVYVFSTTYMSIDNFDPTAYTPEDVKLRDEDLWI 698 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYF---DAQKPWELKKTNPDRAST 446 S + + +E+ E++ + H+A + + E + R++ + W ++K +PD+ Sbjct: 699 TSRANSLAKEVTESLDSLHFHKATRAINHFILEDLSRWYIRLIRGRTW-IEKDDPDKLGA 757 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489 Y +R L + + VP + I+ L + E +S+ Sbjct: 758 -YYSLYYALRLLIVTMSPIVPHITEDIYQNLVRSVEMDALESI 799 >gi|304410296|ref|ZP_07391915.1| leucyl-tRNA synthetase [Shewanella baltica OS183] gi|189083228|sp|A3D7N6|SYL_SHEB5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|304351705|gb|EFM16104.1| leucyl-tRNA synthetase [Shewanella baltica OS183] Length = 859 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 17/240 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+ARF RL G +VL G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 N + +N ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 92 NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 S + DE +++V DG + PV+ E +F +++AY ++LL+ Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 + P+ + ++R R+E + ++ K+FD PD + YV I A Sbjct: 208 TLDGWPDQVKTMQRNWIGRSEGVEMTFG----VAGHDKSFDIYTTRPDTLMGVTYVAIAA 263 >gi|28378904|ref|NP_785796.1| valyl-tRNA synthetase [Lactobacillus plantarum WCFS1] gi|254557109|ref|YP_003063526.1| valyl-tRNA synthetase [Lactobacillus plantarum JDM1] gi|81631055|sp|Q88UX7|SYV_LACPL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|28271741|emb|CAD64647.1| valine--tRNA ligase [Lactobacillus plantarum WCFS1] gi|254046036|gb|ACT62829.1| valyl-tRNA synthetase [Lactobacillus plantarum JDM1] Length = 889 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 20/198 (10%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G+ P DP+ ++ W + +T G+ + +++P + V G DIL F Sbjct: 439 GVDGPKDPENWEQDPDVLDTWFSSALWPFSTMGWPNTDAEDFKRYFPTNTLVTGYDILPF 498 Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ +L K V HG I + G K+SKSLGN IDP++VIE+ G DA Sbjct: 499 ----WVSRMIFQSLEFTGRRPFKNVLLHGLIRDEHGVKMSKSLGNGIDPMDVIEKYGADA 554 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAF 383 LR+FL G+D + + N N I N SR V M L D +P + Sbjct: 555 LRWFLSNGSTAGQDVRFSYTKMDAAWN--FINKIWN-ASRYVIMNLGTMDKPELPAASDW 611 Query: 384 TESDESILSVCSRVLQEI 401 T +D+ ILS + ++++ Sbjct: 612 TLADKWILSRLNATVKQV 629 Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 44 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 103 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+ Q + + M LD S + F T + D + Sbjct: 104 EQGISRYDLGREKFIQQVWDWKDEYASIIKQQWAKMGLSLDYSRERF--TMDDGLSDAVK 161 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G Y W A + + ++K G +Y+ ++ Sbjct: 162 KVFVDLYNKGLIYRGEYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 209 >gi|160876553|ref|YP_001555869.1| leucyl-tRNA synthetase [Shewanella baltica OS195] gi|160862075|gb|ABX50609.1| leucyl-tRNA synthetase [Shewanella baltica OS195] Length = 874 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 17/240 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+ARF RL G +VL G D G AA Sbjct: 47 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 106 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 N + +N ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 107 NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 166 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 S + DE +++V DG + PV+ E +F +++AY ++LL+ Sbjct: 167 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 222 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 + P+ + ++R R+E + ++ K+FD PD + YV I A Sbjct: 223 TLDGWPDQVKTMQRNWIGRSEGVEMTFG----VAGHDKSFDIYTTRPDTLMGVTYVAIAA 278 >gi|332179262|gb|AEE14951.1| Valyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796] Length = 875 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 81/312 (25%), Positives = 135/312 (43%), Gaps = 52/312 (16%) Query: 203 GLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDA 234 +KD +SR+ + WG +IP D+P+ ++ W + Sbjct: 395 NIKDWCISRQIW-WGHRIPAWYCNNCNEIIVSEDEPKKCPKCNSSDLRQDEDVLDTWFSS 453 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KK 289 +T G+ DN K KF+P + V G DI+ F W A ++ ++ L K Sbjct: 454 SLWPFSTMGWPDNTPELK-KFFPTSVLVTGFDIIYF----WVARMIMMSIALTGKEPFKN 508 Query: 290 VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-EIACGKDGFYDKDGLK 347 V HG + +G K+SKS+GNVIDP+++IEE G DALR+ L G+D K+ +K Sbjct: 509 VIIHGLVRDSQGRKMSKSVGNVIDPMDIIEESGADALRFSLASLSNPAGQDIKMSKEKVK 568 Query: 348 KRVNADLANGIGNLVSRSV---SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404 N AN + N +R V +Y+ I D ILS V++ + + Sbjct: 569 GARN--FANKLWN-TARFVLGYEKYFTNYNISIEDINDMEPEDIWILSRSISVIKNLCQK 625 Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462 + A +V + + + D Y + K + N ++ + V V +Q I+L Sbjct: 626 LDEYNFSAASTEVYNFIWDEFCDWYIELTK---FRINNNFKSVLAIKVLFYVFKQSLIML 682 Query: 463 QAFVPKLANKIF 474 F+P + ++ Sbjct: 683 HPFMPFITEDLY 694 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 6/70 (8%) Query: 5 EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58 +K S I PN H+GHA + + D++ R+ RL G +VL+ GTD G + Sbjct: 31 DKKAFSIVIPPPNVTGSLHLGHALDDTLQDIICRYKRLRGYEVLWLPGTDHAGIATQNVV 90 Query: 59 AKAAQNAGVT 68 K Q G+T Sbjct: 91 EKMLQKKGIT 100 >gi|291287646|ref|YP_003504462.1| valyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] gi|290884806|gb|ADD68506.1| valyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] Length = 874 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 86/354 (24%), Positives = 145/354 (40%), Gaps = 60/354 (16%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ D+ + E+ ILP +++ ++D +SR+ + WG +IP Sbjct: 362 WFIKIKPMADEAVKAVETGQIKILPETWHKTYYNWMNE-IRDWCISRQIW-WGHRIPAWY 419 Query: 222 -----------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256 +DP ++ W + +T G+ + + K KF+ Sbjct: 420 CDDCGEIVVEMEDPTECTKCGSKNLRQETDVLDTWFSSGLWPFSTQGWPEETETLK-KFY 478 Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLP------KKVFSHGFILHK-GEKISKSLGN 309 P + G DIL F W A ++ L K+V+ H I K G K+SKS GN Sbjct: 479 PTSCLITGFDILFF----WVARMMMFGLKFRDGVEPFKEVYLHALIRDKDGHKMSKSKGN 534 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK---DGLKKRVNADLANGIGNLVSRSV 366 VIDP+ +I++ G DA R+ L A G+D D+ DG + VN + + Sbjct: 535 VIDPLTMIDKYGADAFRFTLAAFAAQGRDIKLDEARIDGYRNFVNK---------IWNAS 585 Query: 367 SMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423 IL Y+G + + D+ IL Q+I + +N + A + Sbjct: 586 RFILSGYNGQKLESFNNLEIEDKWILQNLKEAEQKISKATRNYDFNEAAGSIYQFFWHKF 645 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D Y + KP + + +R L V V+ + ILL F+P L I+ ++ Sbjct: 646 CDWYIELIKP---RIYDDERKEKALAVASYVLEKSLILLHPFMPFLTEYIYRLV 696 Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 S I PN H+GHA + D++ RFH+L+G + ++ G D G Sbjct: 40 SIVIPPPNVTGSLHMGHALNNTLQDIMIRFHKLNGYETMWMPGMDHAG 87 >gi|39938504|ref|NP_950270.1| valyl-tRNA synthetase [Onion yellows phytoplasma OY-M] gi|39721613|dbj|BAD04103.1| valyl-tRNA synthetase [Onion yellows phytoplasma OY-M] Length = 680 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 31/198 (15%) Query: 203 GLKDLSLSRKTFDWGIKIP--------------DDPQY-----IMYVWIDALTNYLTTTG 243 ++D +SR+ + WG +IP P++ ++ W + +T G Sbjct: 201 NIEDWCISRQLW-WGHQIPAWHKGQEIKVQIESPGPEWSLDCDVLDTWFSSALWPFSTLG 259 Query: 244 YLDNPDGSKAKF---WPADLHVIGKDILRF--HAIYWPAFLLSANLPLPKKVFSHGFIL- 297 + P+ + F +P D+ V G DIL F + + + LL+ P K V HG + Sbjct: 260 W---PNCNAPLFQNRFPTDVLVTGYDILTFWVSKMVFQSILLTHKDPF-KDVLLHGLVRD 315 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN-ADLAN 356 +KG+K+SKS GN +DP+EV+ + G DALR+FL A G D FYD+ + N + Sbjct: 316 NKGQKMSKSKGNGVDPLEVVAKYGTDALRWFLTTNAAPGFDLFYDETKVASSWNFINKLW 375 Query: 357 GIGNLVSRSVSMILKDYD 374 I V + S + D+D Sbjct: 376 NISRFVKLNTSTLDTDFD 393 >gi|90101538|sp|Q6YRJ6|SYV_ONYPE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS Length = 882 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 31/198 (15%) Query: 203 GLKDLSLSRKTFDWGIKIP--------------DDPQY-----IMYVWIDALTNYLTTTG 243 ++D +SR+ + WG +IP P++ ++ W + +T G Sbjct: 403 NIEDWCISRQLW-WGHQIPAWHKGQEIKVQIESPGPEWSLDCDVLDTWFSSALWPFSTLG 461 Query: 244 YLDNPDGSKAKF---WPADLHVIGKDILRF--HAIYWPAFLLSANLPLPKKVFSHGFIL- 297 + P+ + F +P D+ V G DIL F + + + LL+ P K V HG + Sbjct: 462 W---PNCNAPLFQNRFPTDVLVTGYDILTFWVSKMVFQSILLTHKDPF-KDVLLHGLVRD 517 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN-ADLAN 356 +KG+K+SKS GN +DP+EV+ + G DALR+FL A G D FYD+ + N + Sbjct: 518 NKGQKMSKSKGNGVDPLEVVAKYGTDALRWFLTTNAAPGFDLFYDETKVASSWNFINKLW 577 Query: 357 GIGNLVSRSVSMILKDYD 374 I V + S + D+D Sbjct: 578 NISRFVKLNTSTLDTDFD 595 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 18/101 (17%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN + H+GHA+ I D++ RF ++ G DVLF G D G K+ + + Sbjct: 36 TVVIPPPNVTGKLHLGHAWNNTIQDIIIRFKKMQGFDVLFLPGMDHAGIATQNKVKEQLK 95 Query: 64 NAGVTTKV------------FVDQNSRNFRDMADVLDISYD 92 G+ TK + +++++N R VL + D Sbjct: 96 QEGLLTKTLSKEIFLKYAWQWKEEHAQNIRQQWQVLGLHLD 136 >gi|116074155|ref|ZP_01471417.1| valyl-tRNA synthetase [Synechococcus sp. RS9916] gi|116069460|gb|EAU75212.1| valyl-tRNA synthetase [Synechococcus sp. RS9916] Length = 914 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 71/290 (24%), Positives = 122/290 (42%), Gaps = 28/290 (9%) Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266 L ++ + G +I D + ++ W + +T G+ D +++P V G D Sbjct: 442 LEKAKAEYGAGAEIEQD-EDVLDTWFSSGLWPFSTLGWPDADSADLQRWYPTSTLVTGFD 500 Query: 267 ILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323 I+ F + A + +P + V+ HG + + K+SKS GN IDP+ +I+ G D Sbjct: 501 IIFFWVARMTMMAGAFTGEMPF-QDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIDRYGTD 559 Query: 324 ALRYFLVREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPT-- 379 ALR+ LVRE+A G+D D D K + + N + + L + G P Sbjct: 560 ALRFALVREVAGAGQDIRLDYDRKKDTSATVEASRNFANKLWNATRFALMNLGGETPAQL 619 Query: 380 ----PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP 433 P A +D ILS +RV +E E + + A + D Y + K Sbjct: 620 GDPDPAALQLADRWILSRLARVNRETAERYSSYGLGEAAKGLYEFAWNDVCDWYLELSK- 678 Query: 434 WELKKTNPDRAST---------VLYVTVEVIRQLAILLQAFVPKLANKIF 474 ++ NP + V +VI Q+ ++L +P L +++ Sbjct: 679 ---RRLNPGENPSAEALADQRVAKQVLAKVISQMHLMLHPLMPHLTEELW 725 >gi|126175469|ref|YP_001051618.1| leucyl-tRNA synthetase [Shewanella baltica OS155] gi|307301993|ref|ZP_07581751.1| leucyl-tRNA synthetase [Shewanella baltica BA175] gi|125998674|gb|ABN62749.1| leucyl-tRNA synthetase [Shewanella baltica OS155] gi|306914031|gb|EFN44452.1| leucyl-tRNA synthetase [Shewanella baltica BA175] Length = 874 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 17/240 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+ARF RL G +VL G D G AA Sbjct: 47 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 106 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 N + +N ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 107 NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 166 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 S + DE +++V DG + PV+ E +F +++AY ++LL+ Sbjct: 167 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 222 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 + P+ + ++R R+E + ++ K+FD PD + YV I A Sbjct: 223 TLDGWPDQVKTMQRNWIGRSEGVEMTFG----VAGHDKSFDIYTTRPDTLMGVTYVAIAA 278 >gi|311069301|ref|YP_003974224.1| valyl-tRNA synthetase [Bacillus atrophaeus 1942] gi|310869818|gb|ADP33293.1| valyl-tRNA synthetase [Bacillus atrophaeus 1942] Length = 880 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 71/278 (25%), Positives = 123/278 (44%), Gaps = 27/278 (9%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P D+ V G DI+ F Sbjct: 432 GLEAPKDSENWEQDNDVLDTWFSSALWPFSTMGWPDITAEDFKRYYPTDVLVTGYDIIFF 491 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + P K V HG I +G K+SKSLGN +DP++VI++ G D+LRY Sbjct: 492 WVSRMIFQGIEFTGERPF-KDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDQYGADSLRY 550 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL + G+D + + ++ N AN I N + L + DGM + G Sbjct: 551 FLATGSSPGQDLRFSYEKVESTWN--FANKIWN----ASRFALMNMDGMTYDELDLSGEK 604 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 T +D+ IL+ + ++ + + + + + + D Y + K L Sbjct: 605 TVADKWILTRLNETIESVTQLADKYEFGEVGRHLYNFIWDDFCDWYIEMAK---LPLYGE 661 Query: 442 DRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D A+ T + V+ Q LL F+P L +I+ L Sbjct: 662 DEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHL 699 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G DVL+ G D G A A V Sbjct: 43 SVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAG-----IATQAKV 97 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ + SR F + Y +FIR T ++ + Sbjct: 98 EAKLREEGTSRYDLGREKFLEETWKWKEEYAEFIRSQWAKMGLGLDYSRERFTLDEGLNK 157 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 R ++ K+ +KG IY+G Y W A + + +YK G +Y+ + Sbjct: 158 AVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHMSY 208 >gi|313905014|ref|ZP_07838384.1| valyl-tRNA synthetase [Eubacterium cellulosolvens 6] gi|313470084|gb|EFR65416.1| valyl-tRNA synthetase [Eubacterium cellulosolvens 6] Length = 884 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 72/263 (27%), Positives = 119/263 (45%), Gaps = 47/263 (17%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308 F+P D+ V G DI+ F W ++ + + K H ++H +G K+SKSLG Sbjct: 478 FYPTDVLVTGYDIIFF----WVIRMMFSGIEQTGKSPFHHVLIHGLVRDSQGRKMSKSLG 533 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRS 365 N IDP+EVI++ G DALR L+ A G D FY +RV A + AN + N SR Sbjct: 534 NGIDPLEVIDKYGADALRLTLMTGNAPGNDMRFY-----WERVEASRNFANKVWN-ASRF 587 Query: 366 VSMILKDYD-------GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 + M ++ + +P P + IL + + +++ ENM + A+ +V Sbjct: 588 IMMNMEGKEIPESVDVQTLPAPSKW------ILHKVNELAKDVTENMDKYELGIAVQKVH 641 Query: 419 SLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 + + D + + KP L + +L+ EV+ LL F+P + +I+ Sbjct: 642 DFIWDEFCDWFIEMTKP-TLYNGTEEEKGRLLWTLREVLSTALKLLHPFMPFITEEIYCT 700 Query: 477 LFVADE------------NRCFQ 487 L +E +RCF+ Sbjct: 701 LNPEEESVMVSAWPEYSADRCFR 723 >gi|313888188|ref|ZP_07821862.1| valine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845878|gb|EFR33265.1| valine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 883 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 89/362 (24%), Positives = 156/362 (43%), Gaps = 50/362 (13%) Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 H ++ + + +F +++ L Y I+P ER ++ ++D ++SR+ Sbjct: 350 HTVIEPLISKQWFVKMAPLAKPALEEYRKGNLNIIP-ERFGKIYENWLENIRDWNISRQL 408 Query: 214 FDWGIKIP--------------DDP--------------QYIMYVWIDALTNYLTTTGYL 245 + WG ++P +DP Q + W + +T G+ Sbjct: 409 W-WGHRLPVWYSDSDDEIVISREDPSNTEGHEGKTYTQDQDTLDTWFSSALWPFSTLGW- 466 Query: 246 DNPDGSKAK--FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILH-KG 300 P+ + F+P ++ V G DI+ F I + A + LP K VF +G + +G Sbjct: 467 --PEKTPEYDYFYPTNVLVTGYDIIFFWVIRMVFSALEQTGKLPF-KDVFLNGLVRDDQG 523 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIG 359 K+SKSLGN IDP+++I + G DALR+ LV G D FY K + N + AN + Sbjct: 524 RKMSKSLGNGIDPLDIIRDYGADALRFTLVTGNTPGNDMRFYIK---RVEANRNFANKLW 580 Query: 360 NLVSRSVSMILKD--YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 N +R + M + D D D+ I+S +V++ I E + I A + Sbjct: 581 N-ATRFLMMNMSDEIEDSNFDV-NKLHYQDKWIISKLQKVIKSITEKIDKYDIGLAADDI 638 Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + D Y + KP L + + + + V + V+ + LL F+P + +I+ Sbjct: 639 YDFIWSDFCDWYIEIVKP-VLYSDDVEEKTNTVKVLLYVLENILKLLHPFMPYITEEIWQ 697 Query: 476 IL 477 L Sbjct: 698 AL 699 >gi|300865838|ref|ZP_07110584.1| valyl-tRNA synthetase [Oscillatoria sp. PCC 6506] gi|300336162|emb|CBN55742.1| valyl-tRNA synthetase [Oscillatoria sp. PCC 6506] Length = 912 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 127/295 (43%), Gaps = 27/295 (9%) Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDI 267 ++ F +KI DP ++ W + +T G+ P+ ++ A+++P G DI Sbjct: 447 AQAKFGENVKIEQDPD-VLDTWFSSGLWPFSTMGW---PEETQDLARYYPNTTLSTGFDI 502 Query: 268 LRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV 320 + F W A + + +P K V+ HG +L G+K +K+ GN IDP+ +I + Sbjct: 503 IFF----WVARMTMMAGHFTGKMPF-KTVYIHGLMLDENGKKQAKTAGNGIDPLILINKY 557 Query: 321 GVDALRYFLVREIA-CGKDGFYDKD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378 G DALRY L+RE A G+D D + ++ + + N + + ++ +G P Sbjct: 558 GTDALRYALMRETAGAGQDVRLDYNRKTQESATVEASRNFTNKMWNAARFVMISLEGKTP 617 Query: 379 TP-GAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQ 431 GA E D ILS + ++ R ++N + A + + D Y + Sbjct: 618 QQLGAPVEGLELCDGWILSRYHQTVEATRNYIENYGLGEAAKGLYEFIWGDFCDWYIELV 677 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 K L +P V V+ + LL F+P + +I+ L E C Sbjct: 678 KSRLLPDADPTSKQVVQQTLAYVLEGILKLLHPFMPHITEEIWHTLTQKGEEECL 732 >gi|229823987|ref|ZP_04450056.1| hypothetical protein GCWU000282_01291 [Catonella morbi ATCC 51271] gi|229786341|gb|EEP22455.1| hypothetical protein GCWU000282_01291 [Catonella morbi ATCC 51271] Length = 880 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 19/168 (11%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D Q ++ W + +T G+ D +++P + V G DIL F Sbjct: 431 GMEAPADSQNWTQDPDVLDTWFSSALWPFSTMGWPDEESADFKRYFPNNTLVTGYDILTF 490 Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ +L + V HG I +G K+SKSLGN +DP+++IE+ GVD+ Sbjct: 491 ----WVSRMMFQSLEFTGRRPFQNVLIHGLIRDAEGRKMSKSLGNGVDPMDIIEQYGVDS 546 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 LR+FL A G+D + D + N N I N SR V M + D Sbjct: 547 LRWFLANGSAPGQDVRFSTDKMDAAWN--FINKIWN-ASRYVLMNVGD 591 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 13/72 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA+++ + D++ R R+ G D L+ G D +AG+ Sbjct: 40 SIVIPPPNVTGKLHLGHAWDVTLQDMIIRQKRMQGFDTLWLPGMD-----------HAGI 88 Query: 68 TTKVFVDQNSRN 79 T+ V++ R Sbjct: 89 ATQAKVEEKLRG 100 >gi|257052895|ref|YP_003130728.1| isoleucyl-tRNA synthetase [Halorhabdus utahensis DSM 12940] gi|256691658|gb|ACV11995.1| isoleucyl-tRNA synthetase [Halorhabdus utahensis DSM 12940] Length = 1068 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 75/296 (25%), Positives = 141/296 (47%), Gaps = 27/296 (9%) Query: 195 EVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252 + + K + DL+++ +T++ ++PD + VW+D+ + + G LD P+ ++ Sbjct: 512 DAVDLHKGTVDDLTITEDGRTYE---RVPD----VFDVWLDS---SVASWGTLDYPEQTE 561 Query: 253 --AKFWPADLHVIGKDILRFHAIYWPAFLL--SANLPLP-KKVFSHGF-ILHKGEKISKS 306 + WPADL + D R +W + +A +P +V HG+ ++ G +SKS Sbjct: 562 DFEELWPADLIMEAHDQTR--GWFWSQLGMGTAAVGEIPYDEVLMHGYAMMPDGRGMSKS 619 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 G ++P E I E G D +R FL+ + G+D + DG+ + +L N + N+ + Sbjct: 620 KGITVEPQEAIAEGGADPMRAFLLSQNPQGEDMRFSWDGMDS-MQRNL-NILWNVFRFPL 677 Query: 367 S-MILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 M + D+ D + DE +LS V E+ E+ +++ RA+ ++ V E Sbjct: 678 PYMRMDDFSPDETTVEDVELEQIDEWVLSRLQTVESEMGEHFEDRRQDRAIQGLMDFVVE 737 Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477 V R++ + D + T Y T+ V+ + LL F P +A++I+ L Sbjct: 738 DVSRFYVQAVRDRVWAEGEDGSKTAAYATLYRVLEETVALLAPFTPFIADEIYQYL 793 >gi|303322306|ref|XP_003071146.1| leucyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240110845|gb|EER29001.1| leucyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] gi|320040674|gb|EFW22607.1| leucyl-tRNA synthetase [Coccidioides posadasii str. Silveira] Length = 984 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 11/195 (5%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 EK Y+ YP+ H+GH I+DVLARF R+ G DVL G D G AA Sbjct: 70 EKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKRMKGYDVLHPMGWDAFGLPAENAAIE 129 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+ + +N ++ L +D +F+ + + + T R L+ + +KG Y+ Sbjct: 130 RGINPASWTKENIAKMKEQLKGLGTDFDWDREFMTCSPEFYKHTQR-LFLMLHEKGLAYQ 188 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177 Y D+ +++V A+G+ + + V+ E + +FFR++A+++ LL Sbjct: 189 AKAMVNYDPVDQTVLANEQV--DANGRSWRSGAV-VEKRELKQWFFRITAFKEALLKDLD 245 Query: 178 SYYESHPEFILPIER 192 S P+ IL ++R Sbjct: 246 SLASGWPDRILSMQR 260 >gi|307150723|ref|YP_003886107.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7822] gi|306980951|gb|ADN12832.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7822] Length = 908 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 26/292 (8%) Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHA--I 273 I++ DP ++ W + +T G+ P+ + A ++P V G DI+ F + Sbjct: 458 IQLEQDPD-VLDTWFSSGLWPFSTMGW---PEQTLDLATYYPTSTLVTGFDIIFFWVARM 513 Query: 274 YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 A + +P K V+ HG + G+K+SKS N IDP+ +I + G DALRY L+RE Sbjct: 514 TMMAGYFTDQMPF-KDVYIHGLVRDENGKKMSKSANNGIDPLLLIRKYGSDALRYTLIRE 572 Query: 333 IA-CGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI------PTPGAFT 384 +A G+D + + + + N + + ++ + DG PT A Sbjct: 573 VAGAGQDISLQYNRQTDESESVEASRNFANKLWNAARFVMMNLDGKTPQALGEPTSEALE 632 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPD 442 SD ILS + +Q+ R + N + A + + D Y + K K++P Sbjct: 633 ASDRWILSRFALTVQQTRNYIDNYGLGEAAKGLYEFIWGDFCDWYIELVKSRLFDKSSPS 692 Query: 443 R--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQSLDQ 491 R A L +E I + LL F+P + +I+ IL AD++ Q Q Sbjct: 693 RLVAQKTLAFVLEGILK---LLHPFMPHITEEIWHILTQNADQSLALQVYPQ 741 >gi|163848199|ref|YP_001636243.1| valyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl] gi|222526104|ref|YP_002570575.1| valyl-tRNA synthetase [Chloroflexus sp. Y-400-fl] gi|163669488|gb|ABY35854.1| valyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl] gi|222449983|gb|ACM54249.1| valyl-tRNA synthetase [Chloroflexus sp. Y-400-fl] Length = 923 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 79/296 (26%), Positives = 129/296 (43%), Gaps = 53/296 (17%) Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 E +F R D ++ I+P ER +V ++D +SR+ + WG +IP Sbjct: 384 EQWFVRTRPLADLAIAAVRDGRVRIVP-ERFEKVYFHWLENIEDWCISRQLW-WGHRIPV 441 Query: 222 -------------DDPQY--------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 D+P ++ W + +T G+ D D + +F+P + Sbjct: 442 WYMPDGSIVVPGPDEPPPAEGVQDPDVLDTWFSSGLWPFSTLGWPDETDDYR-RFYPTSV 500 Query: 261 HVIGKDILRFHAIYWPAFLLSANL-----PLPKKVFSHGFILHK-GEKISKSLGNVIDPI 314 G DIL F W A ++ P V+ HG + + G K+SKS GNV++P+ Sbjct: 501 METGYDILFF----WVARMMMMGCYFTGQPPFHTVYLHGLVRDEHGRKMSKSFGNVVNPL 556 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374 ++IE+ G DALRY LV G+D + ++ N AN I N+ +S + Sbjct: 557 DIIEQYGADALRYTLVTSGTPGQDVNLNPQRIESARN--FANKIWNITRFVISKL----- 609 Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 G +P TES + V + LQ + ++ I L++ LV+EVDR + Sbjct: 610 GNLPR----TESSK----VTAESLQTAGYTLADRWI---LSRYAHLVAEVDRLMEG 654 Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust. Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 24/152 (15%) Query: 12 AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNA 65 +I PN + H+GHA + I D+L R+ R+ G L+ GTD G ++ K + Sbjct: 49 SIPPPNVTGELHLGHAMFVAIEDLLIRWRRMQGYQTLWVPGTDHAGIATQTQVEKLLERE 108 Query: 66 GVTTKV----------------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109 G + + + + +R R + D S + F T + Sbjct: 109 GTSRQAVGREEFLRRTWEWKEKYGGEITRQLRRLGASCDWSRERF--TLDPGLSRAVHTA 166 Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 +K++ D G IY+G Y +S + + +D EV Sbjct: 167 FKRLYDDGLIYRGTYLVNWSPKLQTAVSDLEV 198 >gi|300813517|ref|ZP_07093854.1| valine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512371|gb|EFK39534.1| valine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 372 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVID 312 F+P D+ V G DI+ F I L LP K V +G + + G K+SKSLGN ID Sbjct: 46 FFPTDVLVTGYDIIFFWVIRMVFSSLEQMGQLPFKDVLLNGLVRDELGRKMSKSLGNGID 105 Query: 313 PIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 P+++I+E G DALR+ LV G D FY K R A+ + ++S + Sbjct: 106 PLDIIDEYGADALRFTLVTGNTPGNDMRFYIKRVESSRNFANKLWNATRFIMMNLSDDIS 165 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429 D + +I + D+ I+S + ++ I E + I A A + + D Y + Sbjct: 166 DSNFLI---DELQDQDKWIISKLEKTIKSITEKIDKYEIGLAAADIYDFIWSDFCDWYIE 222 Query: 430 AQKP---WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 KP E +KTN + +L+V +++ LL F+P + +I+ L Sbjct: 223 MVKPVLYSEGQKTNTQKV--LLFVLENILK----LLHPFMPFITEEIWQTL 267 >gi|196034490|ref|ZP_03101899.1| valyl-tRNA synthetase [Bacillus cereus W] gi|228948172|ref|ZP_04110456.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195993032|gb|EDX56991.1| valyl-tRNA synthetase [Bacillus cereus W] gi|228811530|gb|EEM57867.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 881 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 81/352 (23%), Positives = 149/352 (42%), Gaps = 54/352 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ +K + + E + +P N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMAPLAEKAIELQQKEEEKVTFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313 V G DI+ F W + ++ L K V HG + +G K+SKSLGN IDP Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VIE+ G DA+R+FL A G+D + + ++ N N I N + +L + Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN----ASRFVLMNM 591 Query: 374 DGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427 D M I G + +D+ IL+ + ++ + NM A + + + + D Y Sbjct: 592 DNMKYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWY 651 Query: 428 FDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + K L D A+ T + V+ Q LL F+P + KI+ L Sbjct: 652 IEMAK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A+ G Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + + D F + A Y IR T +K D Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208 >gi|241894967|ref|ZP_04782263.1| valyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313] gi|241871685|gb|EER75436.1| valyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313] Length = 888 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 76/276 (27%), Positives = 118/276 (42%), Gaps = 28/276 (10%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P D V G DI+ F Sbjct: 436 GMEAPADAENWEQDSDVLDTWFSSALWPFSTMGWPDTDAEDFKRYFPTDTLVTGYDIIFF 495 Query: 271 HAIYWPAFLL------SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323 W A ++ + P K V HG I +G K+SKSLGN IDP++VIE+ G D Sbjct: 496 ----WVARMMFQSKEFTGRRPF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGAD 550 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383 ALR+FL G+D + + N N I N SR V M L D D P Sbjct: 551 ALRWFLATGSTPGQDVRFSYTKMDSAWN--FINKIWN-ASRYVLMNLSD-DTKAELPADR 606 Query: 384 TE---SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438 T+ +D+ ILS + + + +N A + + + D Y + K L Sbjct: 607 TKLSLADQWILSRLNATIAAVTKNFDKFEFGEAGRALYNFIWNDFADWYIEMTKE-TLNG 665 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + D +TV + V+ LL +P + I+ Sbjct: 666 DDADAQTTVQSILAYVLDNTLRLLHPIMPFVTEAIW 701 Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 21/166 (12%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 41 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEQRLA 100 Query: 64 NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109 G++ + FV+Q + A L + YD T ++ + R + Sbjct: 101 EDGISRYDLGREKFVEQVWDWKNEYAATIKSQWGKLGLSLDYDRERFTLDEGLSEAVRKV 160 Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 + + +KG IY+G Y + + +D EV ++ +G +Y+ Q+ Sbjct: 161 FVTLYEKGLIYRGEYIINWDPKARTALSDIEVIHQDDEGAFYHVQY 206 >gi|256847984|ref|ZP_05553428.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] gi|256715044|gb|EEU30021.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] Length = 887 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 117/274 (42%), Gaps = 24/274 (8%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P V G DI+ F Sbjct: 437 GMEAPKDAENWEQDHDVLDTWFSSALWPFSTMGWPDTDAPDYKRYFPTSTLVTGYDIIFF 496 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P K V HG I +G K+SKSLGN IDP++VI + GVDALR+ Sbjct: 497 WVSRMIFQSLEFTGKAPF-KNVLLHGLIRDEQGRKMSKSLGNGIDPMDVIAKYGVDALRW 555 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-----IPTPGA 382 FLV G+D + + N N I N SR V M L DGM +P Sbjct: 556 FLVTGSTPGQDIRFSYKKMDAAWN--FINKIWN-ASRYVIMNL---DGMEHAPQLPDKSK 609 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440 + +D IL+ + +Q++ + A + + + D Y + K +L Sbjct: 610 WDLADRWILAKLNATVQQVNAQFEKFEFGEAGRALYNFIWNDFCDWYIEMSKE-KLTNGT 668 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 P + V+ Q L+ +P + K++ Sbjct: 669 PTEKEDTKNILAYVLDQTLKLIHPIMPFVTEKLW 702 Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 21/166 (12%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G DVL+ G D G K+ + Sbjct: 43 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGYDVLWLPGMDHAGIATQAKVEARLR 102 Query: 64 NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109 G++ + FV Q + AD+ + + YD T ++ + R + Sbjct: 103 KQGISRYDLGREKFVQQVWDWKDEYADIIHQQWAKMGISVDYDRERFTLDEGLNKAVRKV 162 Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + + +KG IY+G Y W A + + ++K G +Y+ ++ Sbjct: 163 FVDLYNKGLIYRGTYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 208 >gi|149202271|ref|ZP_01879244.1| valyl-tRNA synthetase [Roseovarius sp. TM1035] gi|149144369|gb|EDM32400.1| valyl-tRNA synthetase [Roseovarius sp. TM1035] Length = 1039 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 74/308 (24%), Positives = 137/308 (44%), Gaps = 37/308 (12%) Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY-VWIDA------LTNYL 239 ++ +E R+ + + L D + ++ DP +++Y VW D ++ L Sbjct: 571 VVEVESRDAALHRLAGALADYTATQ-----------DPTHLVYPVWRDPDVLDTWFSSGL 619 Query: 240 TTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPL-PKKVFSHGFI 296 G L P+ + K++P + + G DI+ F W A ++ + +K F+H ++ Sbjct: 620 WPIGTLGWPENTAELQKYFPTSVLITGFDIIFF----WVARMMMMQYAVVGQKPFAHVYV 675 Query: 297 L-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 KG+K+SKSLGNV+DP+++IE+ G DA+R+ L A G+D K+ + N Sbjct: 676 HALVRDEKGKKMSKSLGNVLDPLDLIEDYGTDAVRFTLTSMAAMGRDLKLSKERIAGYRN 735 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 + N + G +P P A ++ I+ ++ + E ++N + Sbjct: 736 --FTTKLWNAARFAEMNGAVGSAGTVPAPTATV--NKWIIGETAKTRATVDEALENFRFN 791 Query: 412 RALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 A + + V + D Y + KP L +A T + VI Q ILL +P + Sbjct: 792 DAANALYAFVWGTVCDWYVEFSKPLLLDGDAATKAETQATMAW-VIDQCLILLHPIMPFV 850 Query: 470 ANKIFDIL 477 +++ L Sbjct: 851 TEELWGTL 858 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 13/68 (19%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA+ + D+L R+HR+ G D L+ G D +AG+ Sbjct: 40 SIMIPPPNVTGSLHMGHAFNNTLQDILIRWHRMRGHDTLWQPGQD-----------HAGI 88 Query: 68 TTKVFVDQ 75 T++ V++ Sbjct: 89 ATQMVVER 96 >gi|298492495|ref|YP_003722672.1| valyl-tRNA synthetase ['Nostoc azollae' 0708] gi|298234413|gb|ADI65549.1| valyl-tRNA synthetase ['Nostoc azollae' 0708] Length = 1006 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 127/286 (44%), Gaps = 22/286 (7%) Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266 L ++ F +K+ DP ++ W + +T G+ + + ++P V G D Sbjct: 447 LEKAKSQFGEEVKLEQDPD-VLDTWFSSGLWPFSTLGWPEQTQDVET-YYPTTTLVTGFD 504 Query: 267 ILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEE 319 I+ F W A + + +P K V+ HG + +K+SKS N IDP+ ++++ Sbjct: 505 IIFF----WVARMTMMAGHFTGEMPF-KTVYIHGLVRDENNKKMSKSANNGIDPLLLMDK 559 Query: 320 VGVDALRYFLVREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMI 377 G DALRY LV+E+A G+D + D K + ++ + + N + + ++ + DG Sbjct: 560 YGTDALRYTLVKEVAGAGQDIRLEYDRKKDESISVEASRNFANKLWNAARFVMMNLDGQT 619 Query: 378 PT----PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQ 431 P P SD+ I+S +V+++ + N + A + + D Y + Sbjct: 620 PVQLGKPALTELSDKWIISRYHQVVRQTNNYIDNYGLGEAAKGLYEFIWGDFCDWYIELV 679 Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K K +P + E++ + LL F+P + +I+ L Sbjct: 680 KSRLQKDADPASRKVAQQILAEILEGVLKLLHPFMPHITEEIWQTL 725 Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 25/44 (56%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 HIGHA+E + D L R+HR+ G + L+ GTD + +N Sbjct: 56 HIGHAFESALIDTLVRYHRMKGHNTLWVPGTDHASIAVQTILEN 99 >gi|84490249|ref|YP_448481.1| isoleucyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091] gi|84373568|gb|ABC57838.1| IleS [Methanosphaera stadtmanae DSM 3091] Length = 1055 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 74/284 (26%), Positives = 134/284 (47%), Gaps = 25/284 (8%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 ++PD ++ VWID+ Y NP + +++P D G D R Sbjct: 521 RVPD----VLDVWIDSGVAGWAALHYPQNPSENFDEWFPYDFITEGHDQTRGWFYSQLGL 576 Query: 279 LLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 ++A P KKV HGF L + G+K+SKSLGNV+ P EVIE+ G D LR++L+ Sbjct: 577 GVAAFGKAPYKKVLMHGFTLDEDGKKMSKSLGNVVSPEEVIEKYGADVLRFYLLDANKPW 636 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESIL 391 D + D ++ ++ L N + N+ + + + D PT F E D I Sbjct: 637 DDLKFHWDEVQN--SSKLFNILWNVYYFATTYM--SLDNFNPTKHNRDDLIFREEDLWIE 692 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDR--AS 445 S + +++ + E++++ + +RA ++ + E + R++ + W ++ +PD+ A Sbjct: 693 SRINSLIKSVGEDIESLVFNRATEKITDFILEDLSRWYVRLIRGRTW-VESDDPDKLGAY 751 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489 LY T ++ L ++L P + +I+ L E +S+ Sbjct: 752 YTLYYT---LKNLIMVLAPISPHVTEEIYQNLVRGVEEDAPESV 792 >gi|294784265|ref|ZP_06749560.1| valine--tRNA ligase [Fusobacterium sp. 3_1_27] gi|294488131|gb|EFG35482.1| valine--tRNA ligase [Fusobacterium sp. 3_1_27] Length = 887 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 92/402 (22%), Positives = 172/402 (42%), Gaps = 53/402 (13%) Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189 L+++ ++ E A GQ Y Q ++ +F ++ +K L + ILP Sbjct: 326 LKEQGFFIKTEHLHHAVGQCYRCQ-TVIEPRVSPQWFVKMKPLAEKALEVVRNGEVKILP 384 Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------- 221 +R ++ ++D +SR+ + WG +IP Sbjct: 385 -KRMEKIYYNWLENIRDWCISRQIW-WGHRIPAWYGPDRHVFVAMDEAEAKEQAKKHYGH 442 Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYW 275 + + ++ W + +T G+ P+ +K F+P V G DI+ F Sbjct: 443 DVELNQEEDVLDTWFSSALWPFSTMGW---PEKTKELDLFYPTSTLVTGADIIFFWVARM 499 Query: 276 PAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 F + +P K VF HG + + G K+SKSLGN DP+++I+E GVDA+R+ ++ Sbjct: 500 IMFGMYELKKIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNT 559 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESIL 391 + G+D + D L + + AN I N +R V M L+ +D + T + D+ I+ Sbjct: 560 SQGQDVHFSTDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWII 616 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL- 448 S + +++++ ++ + A V + D Y + K L + D+ + L Sbjct: 617 SRLNETAKDVKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLT 675 Query: 449 --YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488 Y+ V+ Q LL F+P + +I+ + V + Q+ Sbjct: 676 AQYMLWTVLEQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQA 717 >gi|194468301|ref|ZP_03074287.1| valyl-tRNA synthetase [Lactobacillus reuteri 100-23] gi|194453154|gb|EDX42052.1| valyl-tRNA synthetase [Lactobacillus reuteri 100-23] Length = 884 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 14/197 (7%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ + +++P + V G DI+ F Sbjct: 435 GMEAPKDAENWEQDKDVLDTWFSSALWPFSTMGWPNTDSADFKRYFPTNTLVTGYDIIFF 494 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P K V HG I +G K+SKSLGN IDP++VI++ GVDALR+ Sbjct: 495 WVSRMIFQSLEFTGRAPF-KNVLLHGLIRDEQGRKMSKSLGNGIDPMDVIKKYGVDALRW 553 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386 FL+ G+D + + N N I N SR V M L + ++P + + Sbjct: 554 FLITGSTPGQDIRFSYTKMDAAWN--FINKIWN-ASRYVIMNLGEMPAPVLPDKSKWDLA 610 Query: 387 DESILSVCSRVLQEIRE 403 D+ ILS + ++++ E Sbjct: 611 DQWILSRLNATVKQVNE 627 Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 21/166 (12%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G DVL+ G D G K+ + Sbjct: 41 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGYDVLWVPGMDHAGIATQAKVEARLR 100 Query: 64 NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109 G++ FV Q + AD+ + + YD T ++ + R + Sbjct: 101 KQGISRYDLGRDKFVQQVWDWKDEYADIIHQQWAKMGISVDYDRERFTLDEGLNKAVRKV 160 Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + + +KG IY+G Y W A + + ++K G +Y+ ++ Sbjct: 161 FVDLYNKGLIYRGTYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 206 >gi|260426547|ref|ZP_05780526.1| valyl-tRNA synthetase [Citreicella sp. SE45] gi|260421039|gb|EEX14290.1| valyl-tRNA synthetase [Citreicella sp. SE45] Length = 1025 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 69/253 (27%), Positives = 113/253 (44%), Gaps = 19/253 (7%) Query: 235 LTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 ++ L G L P+ ++ K++P D+ V G+DIL F W A ++ L + ++ Sbjct: 600 FSSGLWPIGTLGWPEKTRELEKYFPTDVLVTGQDILFF----WVARMMMMQLAVVDEIPF 655 Query: 293 HGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 H LH KG+K+SKSLGNV+DP+E+I+E G DALR+ + G G D Sbjct: 656 HTVYLHGLVRDAKGKKMSKSLGNVVDPLEIIDEYGADALRFTNAAMASLG--GVLKLDMQ 713 Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 + + + N + G +P P A + IL +RV + + M Sbjct: 714 RIAGYRNFGTKLWNAARFAEMNGAVGLGGGVPAPQATV--NRWILGETARVREAVDAAMA 771 Query: 407 NQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 + A + + V V D Y + KP + +A T ++ VI Q ILL Sbjct: 772 EYRFNDAAQALYAFVWGVVCDWYVEFSKPLLQGEDAAAKAETQATMSW-VIDQCLILLHP 830 Query: 465 FVPKLANKIFDIL 477 +P + +++ L Sbjct: 831 IMPFITEELWATL 843 Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 13/69 (18%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA+ + D+L R+HR+ G D L+ G D +AG+ Sbjct: 39 SIMIPPPNVTGSLHMGHAFNNTLQDILIRWHRMRGYDTLWQPGQD-----------HAGI 87 Query: 68 TTKVFVDQN 76 T++ V++ Sbjct: 88 ATQMVVERE 96 >gi|323478896|gb|ADX78335.1| valyl-tRNA synthetase [Enterococcus faecalis 62] Length = 880 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 121/274 (44%), Gaps = 23/274 (8%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G+++P D + ++ W + +T G+ D +++P V G DI+ F Sbjct: 431 GMEVPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIFF 490 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P + V HG I +G K+SKSLGN IDP++VIE+ G DALR+ Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL A G+D + + + N N I N SR V M + +GM I G Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 T +D IL+ + + + E A Q+ + + + D Y + K L N Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGDNE 662 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 T + V + Q+ LL +P + +I++ Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|325571587|ref|ZP_08147087.1| valine--tRNA ligase [Enterococcus casseliflavus ATCC 12755] gi|325156063|gb|EGC68259.1| valine--tRNA ligase [Enterococcus casseliflavus ATCC 12755] Length = 943 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 18/264 (6%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 DP ++ W + +T G+ D + +++P + V G DI+ F W + ++ Sbjct: 506 DPD-VLDTWFSSALWPFSTMGWPDENNEDFQRYFPTNTLVTGYDIIAF----WVSRMIFQ 560 Query: 283 NLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 +L K V HG I +G K+SKSLGN IDP+EVIE+ G DALR+FL A G Sbjct: 561 SLEFTGKRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMEVIEQYGADALRWFLSNGSAPG 620 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCS 395 +D + + + N N I N SR V M + + + I G + +D IL+ + Sbjct: 621 QDVRFSYEKMDAAWN--FINKIWN-ASRFVLMNVSEMTEEDIDFSGEKSVADRWILTRLN 677 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 ++++ + + A Q+ + + + D Y + K L N + V Sbjct: 678 ETIEKVTDLFERFEFGEAGRQLYNFIWDDFCDWYIEMSKE-TLYGDNEAAKQVNKSILVH 736 Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477 V+ Q+ LL +P + +I+ L Sbjct: 737 VLDQILRLLHPIMPFVTEEIWSKL 760 Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 104 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDTLWLPGMDHAGIATQAKVEEKLR 163 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FV+Q + + LD S + F T + + R Sbjct: 164 EQGISRYDLGREKFVEQVWDWKEEYAGHIREQWAKLGLSLDYSRERF--TLDDGLSEAVR 221 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G Y W A + + ++K +G +Y+ + Sbjct: 222 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 269 >gi|254431649|ref|ZP_05045352.1| valyl-tRNA synthetase [Cyanobium sp. PCC 7001] gi|197626102|gb|EDY38661.1| valyl-tRNA synthetase [Cyanobium sp. PCC 7001] Length = 929 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 69/279 (24%), Positives = 118/279 (42%), Gaps = 20/279 (7%) Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYW 275 +++ DP ++ W + +T G+ D+ A ++P + V G DI+ F + Sbjct: 480 LQLEQDPD-VLDTWFSSGLWPFSTLGWPDDTSVDLAAWYPTSVLVTGFDIIFFWVARMTM 538 Query: 276 PAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 A + +P + V+ HG + K+SKS GN IDP+ +IE G DALR+ LVRE+A Sbjct: 539 MAGAFTGRMPF-RDVYIHGLVRDENNRKMSKSAGNGIDPLPLIERYGADALRFALVREVA 597 Query: 335 -CGKDGFYD---KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP------GAFT 384 G+D D DG V + A N + + L + G P+ Sbjct: 598 GAGQDIRLDYDRNDGSSGTV--ETARNFANKLWNATRFALMNLGGETPSSLGRPLTAELE 655 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD 442 D ILS +R ++ E + + A + D+Y + KP L +P Sbjct: 656 SEDRWILSRLARTAEQAAELYGSYRLGEAAKLLYEFAWNDLCDQYIEWAKP-RLAGEDPA 714 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 + V + L ++L +P L +++ + A+ Sbjct: 715 ARTAARRVLAHSLEALLVMLHPLMPHLTEELWHAVTRAE 753 Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 S I PN H+GH +E + D + RF RL G +VL GTD Sbjct: 54 SVVIPPPNVTGSLHMGHGFETALIDTIVRFQRLRGRNVLCLPGTD 98 >gi|295112120|emb|CBL28870.1| valyl-tRNA synthetase [Synergistetes bacterium SGP1] Length = 883 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 101/231 (43%), Gaps = 22/231 (9%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFIL-HKGEKISKSLG 308 F+P L V G DI+ +W A ++ L +P K V+ H I KG+K+SKS G Sbjct: 478 FYPTSLMVTGFDII----FFWVARMIMMGLEFMDEVPFKDVYIHSLIRDEKGDKMSKSKG 533 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 NVIDP+ +I++ G DALR L G+D D ++ + N + N +R M Sbjct: 534 NVIDPLVMIDQYGADALRMALAALSTQGRDILLSSDKIETYRH--FMNKLWN-AARFALM 590 Query: 369 ILKDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SE 423 L D P P D IL+ C V Q+I + + I A + Sbjct: 591 NLDDE----PQPIDRARLRLQDRWILTRCQEVTQKITKCIDGYDIGEAARSLYDFTWGDV 646 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 D Y + KP P+R T V EV + L LL F+P + +++ Sbjct: 647 CDWYIEMSKPALRGDEGPERRRTAQGVLDEVFKTLLPLLHPFIPFVTEELW 697 Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust. Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 28/196 (14%) Query: 6 KLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIA 59 K S I PN H+GHA+ D+L R R+ G VL+ GTD G + Sbjct: 38 KEAFSIVIPPPNVTGSLHMGHAFNNTFQDILCRTKRMQGYSVLWLPGTDHAGIATQNVVE 97 Query: 60 KAAQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103 K G+T +V+ D+ + + + + D + F T ++ Sbjct: 98 KDLAKKGLTRHDLGREAFVKKVWEWKEVYGDRIIKQMKRLGNSCDWRRERF--TFDEGLS 155 Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEE 162 R ++ ++ K IYKG Y + R +D EV Y+ G++Y ++ ++ E Sbjct: 156 RAVRAVFVRLYKKDLIYKGKYIINWCSRCHTALSDLEVEYREMPGKFYYVRY---PFVGE 212 Query: 163 EGYFFRLSAYQDKLLS 178 EG + + +L Sbjct: 213 EGSLLVATTRPETILG 228 >gi|269865191|ref|XP_002651837.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348] gi|220063784|gb|EED42218.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348] Length = 193 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 66/115 (57%), Gaps = 1/115 (0%) Query: 5 EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +K+++++A+ Y N QPH+G+ ++ ADV +RF R G DV++ +GTDE+G I A+ Sbjct: 10 KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 T + V +N +++ D ++ +D F T +HH+ + ++ K D D Sbjct: 70 KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIFLKTIDHFD 124 >gi|300087851|ref|YP_003758373.1| isoleucyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527584|gb|ADJ26052.1| isoleucyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 1015 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 12/257 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF----WPADLHVIGKDILR--FHAIYWPAFLL 280 ++ W D+ + Y +PD S+ F +PAD D R F++++ + LL Sbjct: 544 VIDCWFDSGAMPVAQYHYPFDPD-SRGIFDDGRFPADYICEAIDQTRGWFYSLHALSTLL 602 Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 P + V G IL KGEK+SKS GNV+ P VI++ G DA+R++L G Sbjct: 603 FGR-PSFQNVICLGHILDGKGEKMSKSRGNVVTPESVIDKHGADAVRWYLFTASPAGNAR 661 Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVL 398 + + L K V+ + + N+ S V + YD P P +E D ILS ++++ Sbjct: 662 RFSEQ-LVKEVSRSFMSTLWNVYSFFVLYANIDKYDPSGPEPPVVSELDRWILSELNQLI 720 Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEVIRQ 457 E+ ENM+N + S V + ++ + K+ D + Y + + + Sbjct: 721 AEVTENMENYDPVSGARAMESFVDYLSNWYVRRSRRRFWKSESDADKLSAYYALYQCLVK 780 Query: 458 LAILLQAFVPKLANKIF 474 A LL F+P LA+ I+ Sbjct: 781 TAQLLAPFLPFLADTIY 797 >gi|34762740|ref|ZP_00143729.1| Valyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887590|gb|EAA24670.1| Valyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 887 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 90/388 (23%), Positives = 167/388 (43%), Gaps = 53/388 (13%) Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189 L+++ ++ E A GQ Y Q ++ +F ++ +K L + ILP Sbjct: 326 LKEQGFFIKTEHLHHAVGQCYRCQ-TVIEPRVSPQWFVKMKPLAEKALEVVRNGEVKILP 384 Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------- 221 +R ++ ++D +SR+ + WG +IP Sbjct: 385 -KRMEKIYYNWLENIRDWCISRQIW-WGHRIPAWYGPDRHVFVAMDEAEAKEQAKKHYGH 442 Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYW 275 + + ++ W + +T G+ P+ +K F+P V G DI+ F Sbjct: 443 DVELNQEEDVLDTWFSSALWPFSTMGW---PEKTKELDLFYPTSTLVTGADIIFFWVARM 499 Query: 276 PAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 F + +P K VF HG + + G K+SKSLGN DP+++I+E GVDA+R+ ++ Sbjct: 500 IMFGMYELKKIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNT 559 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESIL 391 + G+D + D L + + AN I N +R V M L+ +D + T + D+ I+ Sbjct: 560 SQGQDVHFSTDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWII 616 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL- 448 S + +++++ ++ + A V + D Y + K L + D+ + L Sbjct: 617 SRLNETAKDVKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLT 675 Query: 449 --YVTVEVIRQLAILLQAFVPKLANKIF 474 Y+ V+ Q LL F+P + +I+ Sbjct: 676 AQYMLWTVLEQGLRLLHPFMPFITEEIW 703 >gi|295698309|ref|YP_003602964.1| leucyl-tRNA synthetase [Candidatus Riesia pediculicola USDA] gi|291157462|gb|ADD79907.1| leucyl-tRNA synthetase [Candidatus Riesia pediculicola USDA] Length = 865 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 14/182 (7%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++K Y + YP+ + H+GH I DV+AR R+ G +VL G D G AA Sbjct: 33 KKKKFYCLSMFPYPSGKLHMGHVRNYTIGDVIARCQRMLGKNVLHPMGWDSFGLPAENAA 92 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + V+ + +N RN +D L +SYD + T E ++ + + K+ +KG IY Sbjct: 93 KRNKVSAFHWTVENIRNMKDQLKKLGLSYDWSRELSTCEPNYYRWEQWFFTKLYEKGLIY 152 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGA----DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 K + D+ +++V G+ +G+ + N +QW F +++ Y ++L Sbjct: 153 KKLTEVNWCPTDKTVLANEQVVNGSCWYCEGKI--ERKNQLQW------FIKITQYSEEL 204 Query: 177 LS 178 L Sbjct: 205 LQ 206 >gi|295109458|emb|CBL23411.1| valyl-tRNA synthetase [Ruminococcus obeum A2-162] Length = 884 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 70/239 (29%), Positives = 115/239 (48%), Gaps = 17/239 (7%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P D+ V G DI+ F I + A + +P V HG + +G K+SKSLGN I Sbjct: 477 FYPTDVLVTGYDIIFFWVIRMVFSALEQTGEVPF-HHVLIHGLVRDSQGRKMSKSLGNGI 535 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 DP+EVI++ G DALR L+ A G D + + ++ N AN I N SR + M L+ Sbjct: 536 DPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVESSRN--FANKIWN-ASRFIMMNLE 592 Query: 372 DYDGMIPTPGAFTE---SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 + P + D+ ILS + V++++ +NM + A+ +V + + D Sbjct: 593 --GKTVTEPADLNDLCFEDKWILSKLNTVIRDVTDNMDKYELGIAVQKVYDFLWDELCDW 650 Query: 427 YFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 Y + K L K + D A+ L+ + + LL ++P + +I+ L E+ Sbjct: 651 YIEMAKV-RLWKADEDLKAANDALWTLRTALTEGLKLLHPYMPFITEEIYCTLLPEQES 708 Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 15/83 (18%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73 PN Q H+GHA + + D+L RF R+ G + L+ GTD +A + T+V V Sbjct: 46 PNVTGQLHMGHALDETMQDILIRFKRMQGYEALWQPGTD-----------HAAIATEVKV 94 Query: 74 DQNSRNFRDMADVLDISYDDFIR 96 + ++ D DI ++F++ Sbjct: 95 IDKLK--KEGIDKHDIGREEFLK 115 >gi|86607800|ref|YP_476562.1| valyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556342|gb|ABD01299.1| valyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 912 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 73/304 (24%), Positives = 137/304 (45%), Gaps = 30/304 (9%) Query: 200 VKSGLKDLSLSRKTFDWGI-KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258 ++G + L +R+ F + ++ DP ++ W + +T G+ + + K +++P Sbjct: 442 ARNGEEALLKAREKFGPEVERVEQDPD-VLDTWFSSALWPFSTLGWPEETEDFK-RYYPN 499 Query: 259 DLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSLGNVI 311 L G DI+ F W A + + +P K V+ +G + + G K+SK+ GN I Sbjct: 500 SLMSTGFDIIFF----WVARMAMMGSQFTGQIPF-KDVYINGLVRDEHGAKMSKTKGNGI 554 Query: 312 DPIEVIEEVGVDALRYFLVRE-IACGKD---GFYDKDGLKKRVNADLANGIGNLVSRSVS 367 DP+E++++ G DALRY LV+E + G+D + K G V A A N + + Sbjct: 555 DPLELLDKYGTDALRYALVKEVVGAGQDIRLAYDRKTGESASVEA--ARNFANKIWNASR 612 Query: 368 MILKDYDGMI------PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 +L + +G P P A +D ILS ++ ++ + + SL+ Sbjct: 613 FVLMNLEGQTPAQLGSPAPEALELADRWILSRLHSTATQVIAELEAYGLGEGARLLYSLI 672 Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 + D Y + KP L+ + V V+ + LL ++P + +I+ +L Sbjct: 673 WDDFCDWYIELVKP-RLRGEDLASKRAAQKVLATVLETILKLLHPWMPHITEEIWQLLTQ 731 Query: 480 ADEN 483 A++ Sbjct: 732 ANQT 735 >gi|78214062|ref|YP_382841.1| valyl-tRNA synthetase [Synechococcus sp. CC9605] gi|78198521|gb|ABB36286.1| valyl-tRNA synthetase [Synechococcus sp. CC9605] Length = 914 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 113/270 (41%), Gaps = 27/270 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + A + + Sbjct: 461 VLDTWFSSGLWPFSTLGWPDADSADLQRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEM 520 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYD 342 P + V+ HG + + K+SKS GN IDP+ +I+ G DALR+ LVRE+A G+D D Sbjct: 521 PF-QDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVREVAGAGQDIRLD 579 Query: 343 KDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PGAFTESDESILSVCS 395 D K + + N + + L + G P P A +D ILS + Sbjct: 580 YDRKKDTSATVEASRNFANKLWNATRFALMNLGGETPAQLGDPDPAALQLADRWILSRLA 639 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST------- 446 RV +E E + + A + D Y + K ++ NP + Sbjct: 640 RVSRETAERYSSYGLGEAAKGLYEFAWNDVCDWYLELSK----RRLNPGENPSAEALADQ 695 Query: 447 --VLYVTVEVIRQLAILLQAFVPKLANKIF 474 V +VI Q+ ++L +P L +++ Sbjct: 696 RVAKQVLAKVISQMHLMLHPLMPHLTEELW 725 >gi|42526872|ref|NP_971970.1| valyl-tRNA synthetase [Treponema denticola ATCC 35405] gi|81412332|sp|Q73MZ2|SYV_TREDE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|41817187|gb|AAS11881.1| valyl-tRNA synthetase [Treponema denticola ATCC 35405] Length = 909 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 90/387 (23%), Positives = 157/387 (40%), Gaps = 68/387 (17%) Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189 L + + ++E K A G Y H ++ + +F ++ K L ++ P Sbjct: 344 LEELGLFKNEEKIKHAVGCCYRC-HTSIEPYVSKQWFVKMQPLAQKALDAWKKGDVVFYP 402 Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------- 221 + N ++ + ++D +SR+ + WG +IP Sbjct: 403 QKWENTYAHWM-NNIRDWCISRQLW-WGHRIPVWYCADCGKTIVSRTDITECPHCKSKNI 460 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281 + ++ W + +T G+ + + A+F+P V G DI+ F W A ++ Sbjct: 461 KQDEDVLDTWFSSWLWPFSTLGWPEKTE-DLARFFPTSALVTGHDIIFF----WVARMIM 515 Query: 282 ANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 A+L K +F HG + K G K+SKSLGN IDP+ IEE G DA+++ L C Sbjct: 516 ASLQFTGKAPFKDIFIHGLVRDKQGRKMSKSLGNGIDPLVAIEEFGADAMKFTLT--FMC 573 Query: 336 G---KDGFYDKDGLKKRVNADLANGI--------GNLVSRSVSMILKDYDGMIPTPGAFT 384 G +D D + K + + AN + GNL R++ + +D + + Sbjct: 574 GSQSQDFLIDMESFK--LGSKFANKVWNASRYILGNLAGRTIVPVGRD-----GSLNSLK 626 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK---KT 439 E D I + Q +R ++ + + A +V D Y + K K + Sbjct: 627 ELDRWIYHELNEAAQTVRSSLDSYRYNEAAQKVYEFFWNNFCDWYVEGTK-LSFKYGDEK 685 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFV 466 DRA++VL +E +L AFV Sbjct: 686 EKDRAASVLLAVLEESLRLLHPFLAFV 712 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 17/89 (19%) Query: 2 KEREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 K+ K + I PN H+GHA + + DV+ R+HR+ G + L+ GTD Sbjct: 38 KKNTKNTFTVVIPPPNVTGVLHVGHALDETLQDVIVRYHRMKGDETLWIPGTD------- 90 Query: 60 KAAQNAGVTTKVFVDQ----NSRNFRDMA 84 +AG+ T+ V++ +N RD+ Sbjct: 91 ----HAGIATQSVVEKKLKAEGKNRRDLG 115 >gi|194017123|ref|ZP_03055735.1| valyl-tRNA synthetase [Bacillus pumilus ATCC 7061] gi|194010991|gb|EDW20561.1| valyl-tRNA synthetase [Bacillus pumilus ATCC 7061] Length = 880 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 72/281 (25%), Positives = 125/281 (44%), Gaps = 33/281 (11%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P+D + ++ W + +T G+ D +++P +L V G DI+ F Sbjct: 432 GLEAPEDIENWEQDNDVLDTWFSSALWPFSTMGWPDADSEDFKRYYPTNLLVTGYDIIFF 491 Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ L K V HG I +G K+SKSLGN IDP+EVI++ G D+ Sbjct: 492 ----WVSRMIFQGLEFTGEKPFKDVLIHGLIRDEQGRKMSKSLGNGIDPMEVIDKYGADS 547 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380 LRYFL + G+D + + ++ N AN I N + L + DG+ + Sbjct: 548 LRYFLATGSSPGQDLRFSFEKVESTWN--FANKIWN----ASRFALMNMDGLTYDELDLT 601 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438 G + +D+ IL+ + ++ + + + + + + D Y + K L Sbjct: 602 GEKSVADQWILTRLNETIESVTQLADKYEFGEVGRHLYNFIWDDFCDWYIEMAK---LPL 658 Query: 439 TNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D A+ T + V+ Q LL F+P L +I+ L Sbjct: 659 YGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHL 699 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN + H+GHA++ + D++ R R+ G DVL+ G D G K+ + Sbjct: 43 TVVIPPPNVTGKLHLGHAWDSTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAKVEAKLR 102 Query: 64 NAGVT-----TKVFVDQNSRNFRDMADV-----------LDISYDDFIRTTEKRHHDTCR 107 GV+ + FV+ + + AD LD S + F T ++ + R Sbjct: 103 EEGVSRYDLGREKFVEGTWKWKEEYADFIRSQWAKMGLGLDYSRERF--TLDEGLNKAVR 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + +YK G +Y+ ++ Sbjct: 161 QVFVQLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHLRY 208 >gi|302037068|ref|YP_003797390.1| valyl-tRNA synthetase [Candidatus Nitrospira defluvii] gi|300605132|emb|CBK41465.1| Valyl-tRNA synthetase [Candidatus Nitrospira defluvii] Length = 920 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 18/259 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP- 285 ++ W + +T G+ K F+P V G DIL F W A ++ L Sbjct: 479 VLDTWFSSALWPFSTLGWPKQTADLKT-FYPTSTLVTGLDILFF----WVARMIMMGLKF 533 Query: 286 ---LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +P + V+ H + +G+K+SKS GNVIDP+ V+E+ G DALR+ + + G+D Sbjct: 534 MGEVPFRDVYIHALVRDAEGQKMSKSKGNVIDPLHVMEQFGTDALRFTMAAMASPGRDVK 593 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ ++ N N I N +R + M L +P + D ILS + + Sbjct: 594 LAEERIEGYRN--FTNKIWN-AARFLLMHLDGERAEVPA-AQRSFPDRWILSRLNAAIST 649 Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 + ++ RA + + + D+Y + KP LK ++A T E + Sbjct: 650 VTHELEQYRFDRASSAIYQFIWHEYCDKYIEMIKP-ALKDQASEQAKTTRQTLAETFETM 708 Query: 459 AILLQAFVPKLANKIFDIL 477 LL F+P ++ +I+ L Sbjct: 709 MRLLHPFMPFISEEIWQTL 727 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQN 64 S I PN H+GHA + D+L R+ R+ G +VL+ GTD G Q + + Sbjct: 41 SMVIPPPNVTGSLHVGHALNNTLQDILIRWRRMQGRNVLWMPGTDHAGIATQNVVERQLQ 100 Query: 65 AGVTTK 70 A TT+ Sbjct: 101 AEGTTR 106 >gi|257420570|ref|ZP_05597560.1| valyl-tRNA synthetase [Enterococcus faecalis X98] gi|257162394|gb|EEU92354.1| valyl-tRNA synthetase [Enterococcus faecalis X98] gi|315156411|gb|EFU00428.1| valyl-tRNA synthetase [Enterococcus faecalis TX0043] Length = 880 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 85/345 (24%), Positives = 146/345 (42%), Gaps = 45/345 (13%) Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F ++ +K + E+ EF P R N+ + D +SR+ + WG +IP Sbjct: 363 WFVKMGPLAEKAIENQETEDAVEFYPP--RFNQTFLRWMENIHDWVISRQLW-WGHQIPA 419 Query: 222 -------------DDP---------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 ++P ++ W + +T G+ D +++P Sbjct: 420 WYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTS 479 Query: 260 LHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316 V G DI+ F + + + + P + V HG I +G K+SKSLGN IDP++V Sbjct: 480 TLVTGYDIIAFWVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDV 538 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 IE+ G DALR+FL A G+D + + + N N I N SR V M + +GM Sbjct: 539 IEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGM 592 Query: 377 ----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G T +D IL+ + + + E A Q+ + + + D Y + Sbjct: 593 TAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEM 652 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 K + D+ +T + V + Q+ LL +P + +I++ Sbjct: 653 SKEILYGENEADKQTT-RSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|239981255|ref|ZP_04703779.1| methionine--tRNA ligase [Streptomyces albus J1074] Length = 650 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 116/514 (22%), Positives = 198/514 (38%), Gaps = 76/514 (14%) Query: 16 PNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74 PN H+GH A + AD+LAR R G + + TGTD+H +A AA+ G T Sbjct: 138 PNGGLHLGHLAGPYVRADMLARALRSMGREARYVTGTDDHQSYVAAAARLRGTTPAEVAT 197 Query: 75 QNSRNFRDMADVLDISYDDFIR-TTEKRHHDTCRILWKKIS--------DKGDIYKGCYS 125 ++ D R + H R L +K++ ++ Y C + Sbjct: 198 AEGDAIVATLRSAGVTLDRLTRPAADTGHGARIRELLEKVAASPAAKEEERPTAY--CPT 255 Query: 126 GWYSLRDE-AYYNDDEVYKGADGQYYNAQHNPVQWME-----------------EEGYFF 167 SL A +DG+ A P + E E + Sbjct: 256 CALSLHQAFARGRCAHCDAASDGEICEACGRPNEARELSAAHCRICGTEAVTRTERALWL 315 Query: 168 RLSAYQDKLLSYYE---SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224 L AY +L Y + P+ + +ER + GL L R T +WG+ + D Sbjct: 316 DLDAYAAELREYLRLAHTPPDLLTLVER------LLDEGLPAYRLGRTT-EWGVDLGDG- 367 Query: 225 QYIMYVWID-ALTNYLTTTGYLDNPDGSKAKFWPADLHV-IGKDILRFHAIYWPAFLLSA 282 + W D ALT +LD + PA + + +G D ++A+ P +A Sbjct: 368 -QALDAWADLALT-------FLDAARTESEQNGPARIALFLGYDNSFYYAVLLPVLAFAA 419 Query: 283 NLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 L LP ++ F+ EK S S G+ + + + G DA+R L+RE Sbjct: 420 GLADHLPAAFVTNQFLHLGDEKFSTSRGHAVWADDALAAAGPDAVRLALLREA------- 472 Query: 341 YDKDGLKKRVNADLANGIG-NLVSRSVSMILKDY------DG-MIPTPGAFTESDESI-- 390 +G R+ A+ A + + + R+ L + DG ++P GA+T+ Sbjct: 473 --PEGRVTRITAERAGQLTEDPLYRAAHAWLDGFAASAGEDGAVVPGTGAWTDVHREFYR 530 Query: 391 -LSVCSRVLQEIRENMQNQLIHRA-LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 L++ +R L + + R+ + Q+ S V+ + A++ + + A T L Sbjct: 531 YLNLATRQLDGLL--LPESFSARSYVDQLESFVTRCAEFRAAEQALRATPSLAEEARTSL 588 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + + A L P LA ++++ L + E Sbjct: 589 ALEYLAAKVFAALAWPITPGLAQRVWEWLGLPGE 622 >gi|310827210|ref|YP_003959567.1| hypothetical protein ELI_1618 [Eubacterium limosum KIST612] gi|308738944|gb|ADO36604.1| hypothetical protein ELI_1618 [Eubacterium limosum KIST612] Length = 882 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 18/239 (7%) Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLP-KKVFSHGFIL-HKGEKISKSL 307 KF+P D+ V G DI+ F W A ++ L +P V+ HG I +G K+SKSL Sbjct: 476 KFYPNDVLVTGYDIIFF----WVARMIFMGLYNMGEVPFADVYIHGLIRDSQGRKMSKSL 531 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN IDP+E+IE+ DALR+ ++ + G D + + L+ N N I N +R V Sbjct: 532 GNGIDPLEIIEQFSADALRFSIITGNSAGNDIRWQDEKLEASRN--FLNKIWN-AARFVL 588 Query: 368 MILKD--YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SE 423 M L + D +D+ ILS + V++++ +NM + A +V Sbjct: 589 MNLDENIMDQQDAALANLENTDKWILSRMNDVVRDVTQNMDKYELGIAAQKVYDFAWNEY 648 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 D Y + KP L + + Y V+ + LL +P + +I+ L A E Sbjct: 649 CDWYIELVKP-RLYGDDETTKAAAQYTLNLVLTNILKLLHPVIPFITEEIYGYLPGAGE 706 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 26/106 (24%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73 PN Q H+GHA++ + DVL RF R+ G L+ G D +A + T+V V Sbjct: 46 PNITGQLHMGHAFDDTLQDVLTRFKRMQGYAALWVPGMD-----------HASIATEVKV 94 Query: 74 DQNSRN-------------FRDMADVLDISYDDFIRTTEKRHHDTC 106 + RN F A ++Y D IR K+ +C Sbjct: 95 VEKIRNEEGKTKEELGREEFLKRAWDWALTYKDRIREQVKKLGASC 140 >gi|237739887|ref|ZP_04570368.1| valyl-tRNA synthetase [Fusobacterium sp. 2_1_31] gi|229423495|gb|EEO38542.1| valyl-tRNA synthetase [Fusobacterium sp. 2_1_31] Length = 887 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 92/404 (22%), Positives = 169/404 (41%), Gaps = 57/404 (14%) Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189 L+++ ++ E A GQ Y Q ++ +F ++ +K L + ILP Sbjct: 326 LKEQGFFIKTEHLHHAVGQCYRCQ-TVIEPRVSPQWFVKMKPLAEKALEVVRNGEIKILP 384 Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------- 221 +R ++ ++D +SR+ + WG +IP Sbjct: 385 -KRMEKIYYNWLENIRDWCISRQIW-WGHRIPAWYGPDRHVFVAMDEAEAKEQAKKHYGH 442 Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYW 275 + ++ W + +T G+ P+ +K F+P + V G DI+ F Sbjct: 443 DVELSQEEDVLDTWFSSALWPFSTMGW---PEKTKELDLFYPTNTLVTGADIIFFWVARM 499 Query: 276 PAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 F + +P K VF HG + + G K+SKSLGN DP+++I+E GVDA+R+ ++ Sbjct: 500 IMFGMYELKKIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEFGVDAIRFSMIYNT 559 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESIL 391 + G+D + D L + + AN I N +R V M L+ +D + T + D+ I+ Sbjct: 560 SQGQDVHFSTDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWII 616 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS---- 445 S + +++ + ++ + A V + D Y + K ++ N D Sbjct: 617 SRLNETAKDVEDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAK---IRLYNDDEDKKISK 673 Query: 446 -TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488 T Y+ ++ Q LL F+P + +I+ + V E Q Sbjct: 674 LTAQYMLWTILEQGLRLLHPFMPFITEEIWQKIKVDGETIMLQQ 717 >gi|256378981|ref|YP_003102641.1| methionyl-tRNA synthetase-like protein [Actinosynnema mirum DSM 43827] gi|255923284|gb|ACU38795.1| methionyl-tRNA synthetase-like protein [Actinosynnema mirum DSM 43827] Length = 327 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 13/155 (8%) Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 GVD LR+ LVR + + + +R +L +G LV R V M+ + Y G P Sbjct: 167 GVDVLRWSLVRGV---------DEAVARR---ELGRELGGLVDRVVVMVHR-YRGGTPPD 213 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440 E +++VC+ + +R + A +V +V +RY + +PWEL ++ Sbjct: 214 AGPPRGSEELVAVCAGAREGVRGALARFDFGAAAGEVWRVVQMANRYLEVSRPWELSRSA 273 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 R +VL V + R LA+ L F P LA ++ + Sbjct: 274 DPRVDSVLAVLLAACRVLAVELTPFAPGLAARVAE 308 >gi|332180370|gb|AEE16058.1| Valyl-tRNA synthetase [Treponema brennaborense DSM 12168] Length = 938 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 116/266 (43%), Gaps = 53/266 (19%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK L+ +++ P + N ++++ ++D +SR+ + WG +IP Sbjct: 394 WFVKMKPLADKALAAWKNGEIVFYPRKWENTYSHWMEN-IRDWCISRQLW-WGHRIPVWY 451 Query: 222 ----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253 DP ++ W + +T G+ +N G Sbjct: 452 CKKCGEMIVSRTDPDSCPKCGAAAADLAQDPD-VLDTWFSSWLWPFSTLGWPEN-TGDLQ 509 Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILHK-GEKISKSL 307 +F+P V DI+ F W + ++ A L K ++ HG + K G K+SKSL Sbjct: 510 RFYPTTALVTAYDIIFF----WVSRMIMAGLEFTGKAPFRDIYIHGLVRDKQGRKMSKSL 565 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GN +DP+E+I E G DAL++ L A G+D DK+ K L + N V + Sbjct: 566 GNGLDPLEIIAEYGSDALKFTLGFMCAQGQDVLVDKESFK------LGSRFANKVWNASR 619 Query: 368 MILKDYDGMIPTPGAFTESDESILSV 393 IL + +G P T+SD + L V Sbjct: 620 YILGNLEGRELVP--VTDSDLTELDV 643 Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 16/87 (18%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 H+GH + D++ R+HR+ G D L+ GTD +AG+ T+ V++ R Sbjct: 69 HMGHGLNNTLQDIVVRYHRMKGDDTLWLPGTD-----------HAGIATQNVVER--RLK 115 Query: 81 RDMADVLDISYDDFIRTT---EKRHHD 104 ++ D+ + F+ T +K HHD Sbjct: 116 KEGLSRRDLGREKFLERTWAVKKEHHD 142 >gi|299535625|ref|ZP_07048946.1| valyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] gi|298728825|gb|EFI69379.1| valyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] Length = 881 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 20/185 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D + +++P + V G DI+ F W + ++ L Sbjct: 448 VLDTWFSSALWPFSTMGWPDEANEEYKRYYPTNTLVTGYDIIFF----WVSRMIFQGLEF 503 Query: 287 P-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K V HG + +G K+SKSLGN +DP++VIE+ G D+LRYFL + G+D Sbjct: 504 TDQRPFKDVLIHGLVRDGEGRKMSKSLGNGVDPMDVIEQYGADSLRYFLATGSSPGQDLR 563 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSR 396 Y + ++ N AN I N + L + DGM I G + +D+ IL+ + Sbjct: 564 YTTEKVEAVWN--FANKIWN----ASRFALMNMDGMTYDEIDLTGEKSVADKWILTRLNE 617 Query: 397 VLQEI 401 ++ + Sbjct: 618 TIERV 622 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 33/172 (19%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D+L R R+ G D L+ G D G A A V Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDILIRMKRMQGYDALWLPGMDHAG-----IATQAKV 96 Query: 68 TTKVFVDQNSR---------------------NFRDMADVLDISYDDFIR---TTEKRHH 103 K+ D +R + RD L + D+ R T +K Sbjct: 97 EAKLREDNITRYDLGREKFLEKTWEWKEEYAGHIRDQWAKLGLGL-DYTRERFTLDKGLS 155 Query: 104 DTCRILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 D + ++ ++ +KG IY+G W A + + +Y+ G +Y+ ++ Sbjct: 156 DAVKTVFVQLYEKGLIYRGERIINWDPAAKTALSDIEVIYQDVQGAFYHMKY 207 >gi|261209049|ref|ZP_05923453.1| valyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289566557|ref|ZP_06446979.1| valyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|293557231|ref|ZP_06675779.1| valyl-tRNA synthetase [Enterococcus faecium E1039] gi|294615719|ref|ZP_06695572.1| valyl-tRNA synthetase [Enterococcus faecium E1636] gi|294617315|ref|ZP_06696955.1| valyl-tRNA synthetase [Enterococcus faecium E1679] gi|260076961|gb|EEW64684.1| valyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289161656|gb|EFD09534.1| valyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|291591439|gb|EFF23095.1| valyl-tRNA synthetase [Enterococcus faecium E1636] gi|291596424|gb|EFF27677.1| valyl-tRNA synthetase [Enterococcus faecium E1679] gi|291600595|gb|EFF30899.1| valyl-tRNA synthetase [Enterococcus faecium E1039] Length = 881 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 86/346 (24%), Positives = 144/346 (41%), Gaps = 47/346 (13%) Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ K + E+ EF P R N+ + D +SR+ + WG +IP Sbjct: 363 WFVKMAPLAKKAIDNQETDQAVEFFPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419 Query: 222 -----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258 DP ++ W + +T G+ D +++P Sbjct: 420 WYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDYKRYFPT 478 Query: 259 DLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIE 315 V G DI+ F + + + + P + V HG I +G K+SKSLGN IDP+E Sbjct: 479 STLVTGYDIIFFWVSRMIFQSLEFTGERPF-ENVLIHGLIRDEQGRKMSKSLGNGIDPME 537 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 VIE+ G DALR+FL A G+D + + + N N I N SR V M + +G Sbjct: 538 VIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NIEG 591 Query: 376 M----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429 M I G + +D IL+ + ++ + E A Q+ + + + D Y + Sbjct: 592 MTVEEIDLSGEKSVADRWILTRLNETIERVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 K L + T + V + Q+ LL +P + +I++ Sbjct: 652 MSKE-VLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWE 696 Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D+L R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEAKLR 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+DQ + M LD S + F T + + R Sbjct: 102 EQGISRYDLGREKFIDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDDGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G Y W A + + ++K +G +Y+ + Sbjct: 160 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 207 >gi|315150958|gb|EFT94974.1| valyl-tRNA synthetase [Enterococcus faecalis TX0012] Length = 880 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 72/271 (26%), Positives = 119/271 (43%), Gaps = 17/271 (6%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P V G DI+ F Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIFF 490 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P + V HG I +G K+SKSLGN IDP++VIE+ G DALR+ Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTES 386 FL A G+D + + + N N I N SR V M ++ D I G T + Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIMNVEGMTDADIDFSGEKTVA 606 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA 444 D IL+ + + + E A Q+ + + + D Y + K L N Sbjct: 607 DRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGENEAAK 665 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 T + V + Q+ LL +P + +I++ Sbjct: 666 QTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|291485223|dbj|BAI86298.1| valyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195] Length = 880 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 27/278 (9%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P+D + ++ W + +T G+ D +++P D+ V G DI+ F Sbjct: 432 GLEAPEDSENWEQDTDVLDTWFSSALWPFSTMGWPDVTAEDFKRYYPTDVLVTGYDIIFF 491 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + P K V HG I +G K+SKSLGN +DP++VI++ G D+LRY Sbjct: 492 WVSRMIFQGIEFTGERPF-KDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDKYGADSLRY 550 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL + G+D + + ++ N AN I N + L + DGM + G Sbjct: 551 FLATGSSPGQDLRFSYEKVESTWN--FANKIWN----ASRFALMNMDGMTYDELDLSGEK 604 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 + +D+ IL+ + ++ + + + + + + D Y + K L Sbjct: 605 SVADKWILTRLNETIEHVTQLADRYEFGEVGRHLYNFIWDDFCDWYIEMAK---LPLYGE 661 Query: 442 DRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D A+ T + V+ Q LL F+P L +I+ L Sbjct: 662 DEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHL 699 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G DVL+ G D G A A V Sbjct: 43 SVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAG-----IATQAKV 97 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ + SR F + Y DFIR T ++ Sbjct: 98 EAKLREEGKSRYDLGREKFLEETWKWKEEYADFIRSQWAKLGLGLDYSRERFTLDEGLSK 157 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 R ++ K+ +KG IY+G Y W A + + +YK G +Y+ + Sbjct: 158 AVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHMSY 208 >gi|291453113|ref|ZP_06592503.1| tRNA synthetase [Streptomyces albus J1074] gi|291356062|gb|EFE82964.1| tRNA synthetase [Streptomyces albus J1074] Length = 640 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 116/514 (22%), Positives = 198/514 (38%), Gaps = 76/514 (14%) Query: 16 PNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74 PN H+GH A + AD+LAR R G + + TGTD+H +A AA+ G T Sbjct: 128 PNGGLHLGHLAGPYVRADMLARALRSMGREARYVTGTDDHQSYVAAAARLRGTTPAEVAT 187 Query: 75 QNSRNFRDMADVLDISYDDFIR-TTEKRHHDTCRILWKKIS--------DKGDIYKGCYS 125 ++ D R + H R L +K++ ++ Y C + Sbjct: 188 AEGDAIVATLRSAGVTLDRLTRPAADTGHGARIRELLEKVAASPAAKEEERPTAY--CPT 245 Query: 126 GWYSLRDE-AYYNDDEVYKGADGQYYNAQHNPVQWME-----------------EEGYFF 167 SL A +DG+ A P + E E + Sbjct: 246 CALSLHQAFARGRCAHCDAASDGEICEACGRPNEARELSAAHCRICGTEAVTRTERALWL 305 Query: 168 RLSAYQDKLLSYYE---SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224 L AY +L Y + P+ + +ER + GL L R T +WG+ + D Sbjct: 306 DLDAYAAELREYLRLAHTPPDLLTLVER------LLDEGLPAYRLGRTT-EWGVDLGDG- 357 Query: 225 QYIMYVWID-ALTNYLTTTGYLDNPDGSKAKFWPADLHV-IGKDILRFHAIYWPAFLLSA 282 + W D ALT +LD + PA + + +G D ++A+ P +A Sbjct: 358 -QALDAWADLALT-------FLDAARTESEQNGPARIALFLGYDNSFYYAVLLPVLAFAA 409 Query: 283 NLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 L LP ++ F+ EK S S G+ + + + G DA+R L+RE Sbjct: 410 GLADHLPAAFVTNQFLHLGDEKFSTSRGHAVWADDALAAAGPDAVRLALLREA------- 462 Query: 341 YDKDGLKKRVNADLANGIG-NLVSRSVSMILKDY------DG-MIPTPGAFTESDESI-- 390 +G R+ A+ A + + + R+ L + DG ++P GA+T+ Sbjct: 463 --PEGRVTRITAERAGQLTEDPLYRAAHAWLDGFAASAGEDGAVVPGTGAWTDVHREFYR 520 Query: 391 -LSVCSRVLQEIRENMQNQLIHRA-LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448 L++ +R L + + R+ + Q+ S V+ + A++ + + A T L Sbjct: 521 YLNLATRQLDGLL--LPESFSARSYVDQLESFVTRCAEFRAAEQALRATPSLAEEARTSL 578 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + + A L P LA ++++ L + E Sbjct: 579 ALEYLAAKVFAALAWPITPGLAQRVWEWLGLPGE 612 >gi|78185780|ref|YP_378214.1| valyl-tRNA synthetase [Synechococcus sp. CC9902] gi|78170074|gb|ABB27171.1| Valyl-tRNA synthetase, class Ia [Synechococcus sp. CC9902] Length = 925 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 111/266 (41%), Gaps = 19/266 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + A + + Sbjct: 472 VLDTWFSSGLWPFSTLGWPDANAPDLNRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEM 531 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYD 342 P K V+ HG + + K+SKS GN IDP+ +IE G DALR+ LVRE+A G+D D Sbjct: 532 PF-KDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALRFALVREVAGAGQDIRLD 590 Query: 343 KDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PGAFTESDESILSVCS 395 D K + + N + + L + G P P A +D ILS + Sbjct: 591 YDRKKDTSATVEASRNFANKLWNATRFALMNLGGETPAQLGDPDPAALQLADRWILSRLA 650 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS-----TVL 448 RV +E + + A + D Y + K NP + T Sbjct: 651 RVNRETAGRYGSYALGEAAKGLYEFAWNDVCDWYLELSKRRLNPGENPSAEALADQRTAK 710 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF 474 V +VI Q+ ++L +P L +++ Sbjct: 711 QVLAKVISQMHLMLHPLMPHLTEELW 736 >gi|293567619|ref|ZP_06678963.1| valyl-tRNA synthetase [Enterococcus faecium E1071] gi|291589720|gb|EFF21524.1| valyl-tRNA synthetase [Enterococcus faecium E1071] Length = 881 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 87/349 (24%), Positives = 145/349 (41%), Gaps = 53/349 (15%) Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ K + E+ EF P R N+ + D +SR+ + WG +IP Sbjct: 363 WFVKMAPLAKKAIDNQETDQAVEFFPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419 Query: 222 -----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258 DP ++ W + +T G+ D +++P Sbjct: 420 WYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDYKRYFPT 478 Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVID 312 V G DI+ F W + ++ +L + V HG I +G K+SKSLGN ID Sbjct: 479 STLVTGYDIIFF----WVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNGID 534 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 P+EVIE+ G DALR+FL A G+D + + + N N I N SR V M + Sbjct: 535 PMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---N 588 Query: 373 YDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 +GM I G + +D IL+ + ++ + E A Q+ + + + D Sbjct: 589 IEGMTVEEIDLSGEKSVADRWILTRLNETIERVTELFDRFEFGEAGRQLYNFIWDDFCDW 648 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 Y + K L + T + V + Q+ LL +P + +I++ Sbjct: 649 YIEMSKE-VLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWE 696 Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D+L R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEAKLR 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+DQ + M LD S + F T + + R Sbjct: 102 EQGISRYDLGREKFIDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDDGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G Y W A + + ++K +G +Y+ + Sbjct: 160 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 207 >gi|257885020|ref|ZP_05664673.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|257820872|gb|EEV48006.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,501] Length = 881 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 87/349 (24%), Positives = 145/349 (41%), Gaps = 53/349 (15%) Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ K + E+ EF P R N+ + D +SR+ + WG +IP Sbjct: 363 WFVKMAPLAKKAIDNQETDQAVEFFPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419 Query: 222 -----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258 DP ++ W + +T G+ D +++P Sbjct: 420 WYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDYKRYFPT 478 Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVID 312 V G DI+ F W + ++ +L + V HG I +G K+SKSLGN ID Sbjct: 479 STLVTGYDIIFF----WVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNGID 534 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 P+EVIE+ G DALR+FL A G+D + + + N N I N SR V M + Sbjct: 535 PMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---N 588 Query: 373 YDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 +GM I G + +D IL+ + ++ + E A Q+ + + + D Sbjct: 589 IEGMTVEEIDLSGEKSVADRWILTRLNETIERVTELFDRFEFGEAGRQLYNFIWDDFCDW 648 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 Y + K L + T + V + Q+ LL +P + +I++ Sbjct: 649 YIEMSKE-VLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWE 696 Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D+L R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEAKLR 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+DQ + M LD S + F T + + R Sbjct: 102 EQGISRYDLGREKFIDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDDGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G Y W A + + ++K +G +Y+ + Sbjct: 160 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 207 >gi|69246247|ref|ZP_00603860.1| Valyl-tRNA synthetase, class Ia [Enterococcus faecium DO] gi|257879526|ref|ZP_05659179.1| valyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257883460|ref|ZP_05663113.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257890246|ref|ZP_05669899.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257894823|ref|ZP_05674476.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|258616812|ref|ZP_05714582.1| valyl-tRNA synthetase [Enterococcus faecium DO] gi|260559758|ref|ZP_05831938.1| valyl-tRNA synthetase [Enterococcus faecium C68] gi|293559745|ref|ZP_06676266.1| valyl-tRNA synthetase [Enterococcus faecium E1162] gi|294622457|ref|ZP_06701479.1| valyl-tRNA synthetase [Enterococcus faecium U0317] gi|314938905|ref|ZP_07846172.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|314943091|ref|ZP_07849892.1| valyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|314948112|ref|ZP_07851513.1| valyl-tRNA synthetase [Enterococcus faecium TX0082] gi|314951622|ref|ZP_07854667.1| valyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|314993873|ref|ZP_07859207.1| valyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|314996714|ref|ZP_07861737.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|68195348|gb|EAN09797.1| Valyl-tRNA synthetase, class Ia [Enterococcus faecium DO] gi|257813754|gb|EEV42512.1| valyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257819118|gb|EEV46446.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257826606|gb|EEV53232.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257831202|gb|EEV57809.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|260074426|gb|EEW62748.1| valyl-tRNA synthetase [Enterococcus faecium C68] gi|291598004|gb|EFF29114.1| valyl-tRNA synthetase [Enterococcus faecium U0317] gi|291606293|gb|EFF35706.1| valyl-tRNA synthetase [Enterococcus faecium E1162] gi|313589152|gb|EFR67997.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|313591683|gb|EFR70528.1| valyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|313596218|gb|EFR75063.1| valyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|313598193|gb|EFR77038.1| valyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|313641779|gb|EFS06359.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|313645448|gb|EFS10028.1| valyl-tRNA synthetase [Enterococcus faecium TX0082] Length = 881 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 87/349 (24%), Positives = 145/349 (41%), Gaps = 53/349 (15%) Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ K + E+ EF P R N+ + D +SR+ + WG +IP Sbjct: 363 WFVKMAPLAKKAIDNQETDQAVEFFPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419 Query: 222 -----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258 DP ++ W + +T G+ D +++P Sbjct: 420 WYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDYKRYFPT 478 Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVID 312 V G DI+ F W + ++ +L + V HG I +G K+SKSLGN ID Sbjct: 479 STLVTGYDIIFF----WVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNGID 534 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 P+EVIE+ G DALR+FL A G+D + + + N N I N SR V M + Sbjct: 535 PMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---N 588 Query: 373 YDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 +GM I G + +D IL+ + ++ + E A Q+ + + + D Sbjct: 589 IEGMTVEEIDLSGEKSVADRWILTRLNETIERVTELFDRFEFGEAGRQLYNFIWDDFCDW 648 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 Y + K L + T + V + Q+ LL +P + +I++ Sbjct: 649 YIEMSKE-VLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWE 696 Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D+L R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEAKLR 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+DQ + M LD S + F T + + R Sbjct: 102 EQGISRYDLGREKFIDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDDGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G Y W A + + ++K +G +Y+ + Sbjct: 160 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 207 >gi|221310749|ref|ZP_03592596.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221315074|ref|ZP_03596879.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319993|ref|ZP_03601287.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. JH642] gi|221324275|ref|ZP_03605569.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY] gi|255767644|ref|NP_390687.2| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|251757438|sp|Q05873|SYV_BACSU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|225185272|emb|CAB14769.2| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] Length = 880 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 27/278 (9%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P+D + ++ W + +T G+ D +++P D+ V G DI+ F Sbjct: 432 GLEAPEDSENWEQDTDVLDTWFSSALWPFSTMGWPDVTAEDFKRYYPTDVLVTGYDIIFF 491 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + P K V HG I +G K+SKSLGN +DP++VI++ G D+LRY Sbjct: 492 WVSRMIFQGIEFTGERPF-KDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDKYGADSLRY 550 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL + G+D + + ++ N AN I N + L + DGM + G Sbjct: 551 FLATGSSPGQDLRFSYEKVESTWN--FANKIWN----ASRFALMNMDGMTYDELDLSGEK 604 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 + +D+ IL+ + ++ + + + + + + D Y + K L Sbjct: 605 SVADKWILTRLNETIEHVTQLADRYEFGEVGRHLYNFIWDDFCDWYIEMAK---LPLYGE 661 Query: 442 DRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D A+ T + V+ Q LL F+P L +I+ L Sbjct: 662 DEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHL 699 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G DVL+ G D G A A V Sbjct: 43 SVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAG-----IATQAKV 97 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ + SR F + Y DFIR T ++ Sbjct: 98 EAKLREEGKSRYDLGREKFLEETWKWKEEYADFIRSQWAKLGLGLDYSRERFTLDEGLSK 157 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 R ++ K+ +KG IY+G Y W A + + +YK G +Y+ + Sbjct: 158 AVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHMSY 208 >gi|158521740|ref|YP_001529610.1| valyl-tRNA synthetase [Desulfococcus oleovorans Hxd3] gi|158510566|gb|ABW67533.1| valyl-tRNA synthetase [Desulfococcus oleovorans Hxd3] Length = 884 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 21/261 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ PD ++ F+P + V G DIL F W A +L L Sbjct: 452 VLDTWFSSALWPFSTLGW---PDRTRLLETFYPTSVLVTGFDILFF----WVARMLMMGL 504 Query: 285 PLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 K++ H +H +G+K+SKS GNVIDPI++I G DALR+ L A G+D Sbjct: 505 HFMKEIPFHDVYIHALVRDEEGKKMSKSTGNVIDPIDIINTYGADALRFTLTAFAAQGRD 564 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398 + ++ + N + N ++ + + Y+ P P +D ILS Sbjct: 565 IKLSESRIEGYRH--FINKLWNAARFAMMHVDRGYEE--PPPANAGLADRWILSRLDNAR 620 Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 + + + + A + V D Y +A KP K ++ V V+R Sbjct: 621 KSTADALDTYRFNDAAGALYQFVWHELCDWYLEAAKPDLYGKNGEEQKEKTKQVLWHVLR 680 Query: 457 QLAILLQAFVPKLANKIFDIL 477 +LL +P + +I+ L Sbjct: 681 DTLVLLHPIIPFVTEEIWHAL 701 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 18/90 (20%) Query: 3 EREKLYI-----------STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTT 49 E+EKL+ S I PN H+GHA + + D+L R+ RL G +VL+ Sbjct: 24 EKEKLFAASEEGHGRPGYSIVIPPPNVTGMLHMGHALNITLQDILCRYRRLCGDNVLWVP 83 Query: 50 GTDEHGQKIAKAAQNAGVTTKVFVDQNSRN 79 GTD G A QN V K+ + R+ Sbjct: 84 GTDHAG----IATQNV-VEKKLMAEGTDRH 108 >gi|452309|emb|CAA54458.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] Length = 880 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 27/278 (9%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P+D + ++ W + +T G+ D +++P D+ V G DI+ F Sbjct: 432 GLEAPEDSENWEQDTDVLDTWFSSALWPFSTMGWPDVTAEDFKRYYPTDVLVTGYDIIFF 491 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + P K V HG I +G K+SKSLGN +DP++VI++ G D+LRY Sbjct: 492 WVSRMIFQGIEFTGERPF-KDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDKYGADSLRY 550 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL + G+D + + ++ N AN I N + L + DGM + G Sbjct: 551 FLATGSSPGQDLRFSYEKVESTWN--FANKIWN----ASRFALMNMDGMTYDELDLSGEK 604 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 + +D+ IL+ + ++ + + + + + + D Y + K L Sbjct: 605 SVADKWILTRLNETIEHVTQLADRYEFGEVGRHLYNFIWDDFCDWYIEMAK---LPLYGE 661 Query: 442 DRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D A+ T + V+ Q LL F+P L +I+ L Sbjct: 662 DEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHL 699 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G DVL+ G D G A A V Sbjct: 43 SVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAG-----IATQAKV 97 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ + SR F + Y DFIR T ++ Sbjct: 98 EAKLREEGKSRYDLGREKFLEETWKWKEEYADFIRSQWAKLGLGLDYSRERFTLDEGLSK 157 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 R ++ K+ +KG IY+G Y W A + + +YK G +Y+ + Sbjct: 158 AVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHMSY 208 >gi|258569569|ref|XP_002543588.1| leucyl-tRNA synthetase [Uncinocarpus reesii 1704] gi|237903858|gb|EEP78259.1| leucyl-tRNA synthetase [Uncinocarpus reesii 1704] Length = 964 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 19/193 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK Y+ YP+ H+GH I+DVLARF R+ G DVL G D G AA Sbjct: 72 REKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKRMKGYDVLHPMGWDAFGLPAENAAI 131 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 G+ + ++N ++ L + D R L+ + +KG Y+ Sbjct: 132 ERGINPADWTEENIAKMKEQLKALGTEF------------DWDRRLFLMLHEKGLAYQAK 179 Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL----SY 179 Y D+ +++V A+G + + V+ E + +FFR++A+++ LL S Sbjct: 180 AMVNYDPVDKTVLANEQV--DANGCSWRSGAK-VEKRELKQWFFRITAFKEALLKDLDSL 236 Query: 180 YESHPEFILPIER 192 + PE IL ++R Sbjct: 237 ADGWPERILSMQR 249 >gi|284047776|ref|YP_003398115.1| valyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] gi|283951997|gb|ADB46800.1| valyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] Length = 884 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 89/362 (24%), Positives = 151/362 (41%), Gaps = 51/362 (14%) Query: 154 HNPVQWMEEEGYFFRLSAYQDKLL-SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212 H+ V+ M +F ++ + + E H EF+ P + ++++ + D +SR+ Sbjct: 354 HHVVEPMVSTQWFVKMKPLAEAAIKCVTEGHTEFV-PSRFTKTYLQWMEN-IHDWCISRQ 411 Query: 213 TFDWGIKIP----DDPQYI------------------------MYVWIDALTNYLTTTGY 244 + WG +IP DD + + W + +T G+ Sbjct: 412 IW-WGHRIPVWYCDDCGEVAASRTDLTACPKCGSTHIHQEEDCLDTWFSSGLWPFSTFGW 470 Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS------ANLPLPKKVFSHGFIL- 297 D + ++P + V G DI+ F W A +++ P K VF HG + Sbjct: 471 PDKTE-ELEHWYPTSVLVTGYDIIFF----WVARMITMGEEFMGKEPF-KHVFIHGLVRD 524 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 +G K+SKSLGN IDP+EV+ + G D LR+ L+ G D + + ++ N AN Sbjct: 525 EQGRKMSKSLGNGIDPVEVVNQYGADTLRFMLITGNTPGNDMRFYWNRIESTRN--FANK 582 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 I N SR M L YD T +D+ ILS +Q++ ++ + A + Sbjct: 583 IWN-ASRFALMNLDGYD-KDAEKAPLTLADKWILSRLQHTIQDVSTYLEKFELGEAGRLI 640 Query: 418 ISLV-SEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + EV D Y + KP + N +T V V+ LL ++P + +I+ Sbjct: 641 YDFIWGEVCDWYIELAKPRLYDRENAPARATAQTVLCRVLGDAMKLLHPYMPFITEEIWQ 700 Query: 476 IL 477 L Sbjct: 701 HL 702 >gi|326407749|gb|ADZ64820.1| valyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56] Length = 880 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 46/278 (16%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDENSADFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K H ++H +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGKSPFHNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + D + N N I N VSR + M +D S +++ S ++V + Sbjct: 559 FSYDKMDAAWN--FINKIWN-VSRYILMNAEDV------------SADAVSSALTKVANK 603 Query: 401 IRENMQNQLIHRALAQVISLVSE-VDRY-------------FDAQKPWELKKT-----NP 441 N+ ++ I L V+E +D++ +D W L+ T Sbjct: 604 TAGNVTDRWILTRLNDTARRVTEQMDKFEFGVAGHILYNFIWDEFANWYLELTKEVMFGE 663 Query: 442 DRASTVLY--VTVEVIRQLAILLQAFVPKLANKIFDIL 477 D A + V + V+ Q+ LL +P +IF+ L Sbjct: 664 DEAEKDITRAVLLHVLDQVLRLLHPIMPFFTEEIFEKL 701 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 23/164 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+A Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVAARLA 99 Query: 64 NAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 G+ + + D+ + ++ + IS D+ R T ++ R Sbjct: 100 EDGILPQDLGREKFLDKVWEWKDEYATTIKEQWGKMGISV-DYSRERFTLDEGLSQAVRK 158 Query: 109 LWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYN 151 ++ ++ +KG IY+G W A + + ++K DG +Y+ Sbjct: 159 VFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIHKEIDGAFYH 202 >gi|218282236|ref|ZP_03488535.1| hypothetical protein EUBIFOR_01117 [Eubacterium biforme DSM 3989] gi|218216774|gb|EEC90312.1| hypothetical protein EUBIFOR_01117 [Eubacterium biforme DSM 3989] Length = 870 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 74/272 (27%), Positives = 120/272 (44%), Gaps = 42/272 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR-NEVISFVKSGLKDLSLSRKTFDWGIKIP-- 221 +F ++ +++L E + I + R N+ ++D +SR+ + WG +IP Sbjct: 358 WFVKMKPLAEEVLKNQEIEDQRINFVPSRFNKTFEQWLENIEDWCISRQLW-WGHRIPAW 416 Query: 222 ------------DDPQYI---------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 +DP+ I + W + +T G+ + +++P D+ Sbjct: 417 TNKETGEIYVGMEDPKDIENWKQDEDVLDTWFSSALWPFSTLGWPETT-ADLERYFPNDV 475 Query: 261 HVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313 V G DI+ F W A + N P K V HG + +G K+SKSLGN IDP Sbjct: 476 LVTGYDIIFF----WVARMAFQTRYCMKNRPF-KDVLIHGLVRDTQGRKMSKSLGNGIDP 530 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373 ++VI+E G DALR+FL G+D +D+ + N N I N +R V M + D Sbjct: 531 MDVIQEKGADALRFFLTTNSTPGQDLRFDETKMDASWN--FINKIWN-AARYVQMQIGDT 587 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENM 405 + A D+ IL+ + VL + NM Sbjct: 588 KPELDMTKA-NSVDKWILARFNEVLDHVSTNM 618 Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 16/97 (16%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 H+GHA++ + D+L R+ RL G DV + G D +AG+ T+ VD +R Sbjct: 50 HLGHAWDTTLQDILCRYKRLKGYDVCWVAGMD-----------HAGIATQAKVD--ARLK 96 Query: 81 RDMADVLDISYDDFIRTT---EKRHHDTCRILWKKIS 114 + DI + F+ ++ + T R W K+ Sbjct: 97 SEGISRYDIGREKFLERAWEWKEEYASTIRSQWAKLG 133 >gi|321312340|ref|YP_004204627.1| valyl-tRNA synthetase [Bacillus subtilis BSn5] gi|320018614|gb|ADV93600.1| valyl-tRNA synthetase [Bacillus subtilis BSn5] Length = 880 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 27/278 (9%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P+D + ++ W + +T G+ D +++P D+ V G DI+ F Sbjct: 432 GLEAPEDSENWEQDTDVLDTWFSSALWPFSTMGWPDVTAEDFKRYYPTDVLVTGYDIIFF 491 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + P K V HG I +G K+SKSLGN +DP++VI++ G D+LRY Sbjct: 492 WVSRMIFQGIEFTGERPF-KDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDKYGADSLRY 550 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL + G+D + + ++ N AN I N + L + DGM + G Sbjct: 551 FLATGSSPGQDLRFSYEKVESTWN--FANKIWN----ASRFALMNMDGMTYDELDLSGEK 604 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 + +D+ IL+ + ++ + + + + + + D Y + K L Sbjct: 605 SVADKWILTRLNETIEHVTQLADRYEFGEVGRHLYNFIWDDFCDWYIEMAK---LPLYGE 661 Query: 442 DRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D A+ T + V+ Q LL F+P L +I+ L Sbjct: 662 DEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHL 699 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 66/166 (39%), Gaps = 21/166 (12%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-QKIAKAAQNAG 66 S I PN + H+GHA++ + D++ R R+ G DVL+ G D G AK Sbjct: 43 SVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAKVEAKLR 102 Query: 67 VTTKVFVDQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCRIL 109 K D F + Y DFIR T ++ R + Sbjct: 103 EEGKPRYDLGREKFLEETWKWKEEYADFIRSQWAKLGLGLDYSRERFTLDEGLSKAVREV 162 Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + K+ +KG IY+G Y W A + + +YK G +Y+ + Sbjct: 163 FVKLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHMSY 208 >gi|157693210|ref|YP_001487672.1| valyl-tRNA synthetase [Bacillus pumilus SAFR-032] gi|157681968|gb|ABV63112.1| valine--tRNA ligase [Bacillus pumilus SAFR-032] Length = 880 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 72/281 (25%), Positives = 125/281 (44%), Gaps = 33/281 (11%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P+D + ++ W + +T G+ D +++P +L V G DI+ F Sbjct: 432 GLEAPEDIENWEQDNDVLDTWFSSALWPFSTMGWPDAESEDFKRYYPTNLLVTGYDIIFF 491 Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ L K V HG I +G K+SKSLGN IDP+EVI++ G D+ Sbjct: 492 ----WVSRMIFQGLEFTGEKPFKDVLIHGLIRDEQGRKMSKSLGNGIDPMEVIDKYGADS 547 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380 LRYFL + G+D + + ++ N AN I N + L + DG+ + Sbjct: 548 LRYFLATGSSPGQDLRFSFEKVESTWN--FANKIWN----ASRFALMNMDGLTYDELDLI 601 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438 G + +D+ IL+ + ++ + + + + + + D Y + K L Sbjct: 602 GEKSVADQWILTRLNETIESVTQLADKYEFGEVGRHLYNFIWDDFCDWYIEMAK---LPL 658 Query: 439 TNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D A+ T + V+ Q LL F+P L +I+ L Sbjct: 659 YGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHL 699 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN + H+GHA++ + D++ R R+ G DVL+ G D G K+ + Sbjct: 43 TVVIPPPNVTGKLHLGHAWDSTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAKVEAKLR 102 Query: 64 NAGVT-----TKVFVDQNSRNFRDMADV-----------LDISYDDFIRTTEKRHHDTCR 107 GV+ + FV++ + + AD LD S + F T ++ + R Sbjct: 103 EEGVSRYDLGREKFVEETWKWKEEYADFIRSQWAKMGLGLDYSRERF--TLDEGLNKAVR 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + +YK G +Y+ ++ Sbjct: 161 QVFVQLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHLRY 208 >gi|257083370|ref|ZP_05577731.1| valyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|256991400|gb|EEU78702.1| valyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|315171826|gb|EFU15843.1| valyl-tRNA synthetase [Enterococcus faecalis TX1342] gi|327536084|gb|AEA94918.1| valine--tRNA ligase [Enterococcus faecalis OG1RF] Length = 880 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P V G DI+ F Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIAF 490 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P + V HG I +G K+SKSLGN IDP++VIE+ G DALR+ Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL A G+D + + + N N I N SR V M + +GM I G Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 T +D IL+ + + + E A Q+ + + + D Y + K L N Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGENE 662 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 T + V + Q+ LL +P + +I++ Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|238019263|ref|ZP_04599689.1| hypothetical protein VEIDISOL_01127 [Veillonella dispar ATCC 17748] gi|237863962|gb|EEP65252.1| hypothetical protein VEIDISOL_01127 [Veillonella dispar ATCC 17748] Length = 822 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 8/180 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + +EK Y+ YP+ H+GH I DV+ARF ++ G +VL G D G A Sbjct: 30 ESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMKGFNVLHPMGWDSFGMPAENA 89 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119 A G+ K + N N + L +SY D + T ++ ++ + +++ KG Sbjct: 90 AIKHGIAPKTWTLDNIENMKLQQKALGLSYDWDREVATCKEDYYKWTQWFFQQFYKKGLA 149 Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 YK W N+ + DG + NPV+ + +F R++ Y D+LL+ Sbjct: 150 YKKEAKVNWCETCHTVLANEQVI----DGACWRCD-NPVEKKDLSQWFLRITEYADRLLT 204 Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 14/147 (9%) Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 L+ AN P + + + G +L +G K+SKS GNV+ P E+I G D R F++ +D Sbjct: 560 LIEANEPF-RGLLTQGMVLKEGSKMSKSKGNVVSPEEIINTYGADTARLFILFAAPVDRD 618 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSR 396 + G++ G + R V I+ Y + G T+ + ++ R Sbjct: 619 LDWSDQGVE---------GSYRFLGR-VWRIVDAYNEEAKKNVTGELTKDEFALRRELHR 668 Query: 397 VLQEIRENMQNQL-IHRALAQVISLVS 422 V++++ E++ N + A++ ++ LV+ Sbjct: 669 VIKKVTEDLDNNFNFNTAISAIMELVN 695 >gi|315148803|gb|EFT92819.1| valyl-tRNA synthetase [Enterococcus faecalis TX4244] Length = 880 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P V G DI+ F Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIAF 490 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P + V HG I +G K+SKSLGN IDP++VIE+ G DALR+ Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL A G+D + + + N N I N SR V M + +GM I G Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 T +D IL+ + + + E A Q+ + + + D Y + K L N Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGENE 662 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 T + V + Q+ LL +P + +I++ Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|256618285|ref|ZP_05475131.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256597812|gb|EEU16988.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|315032301|gb|EFT44233.1| valyl-tRNA synthetase [Enterococcus faecalis TX0017] gi|315145977|gb|EFT89993.1| valyl-tRNA synthetase [Enterococcus faecalis TX2141] Length = 880 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P V G DI+ F Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIAF 490 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P + V HG I +G K+SKSLGN IDP++VIE+ G DALR+ Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL A G+D + + + N N I N SR V M + +GM I G Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 T +D IL+ + + + E A Q+ + + + D Y + K L N Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGENE 662 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 T + V + Q+ LL +P + +I++ Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|308807252|ref|XP_003080937.1| tRNA synthetase class I (ISS) [Ostreococcus tauri] gi|116059398|emb|CAL55105.1| tRNA synthetase class I (ISS) [Ostreococcus tauri] Length = 985 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 114/272 (41%), Gaps = 27/272 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + F+PA + G DIL F W A ++ + + Sbjct: 528 VLDTWFSSGLWPFSTCGWPNEEAPDMKNFFPASVLETGHDILFF----WVARMIMMSYGM 583 Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K+ H LH +G K+SKSLGNV+DP+ VI E G DALR+ L A G+D Sbjct: 584 TGKLPFHTVYLHGLVRDAQGRKMSKSLGNVVDPLGVISEQGCDALRFTLATGTAPGQDLN 643 Query: 341 YDKDGLKKRVNADLANGI---GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397 + + L N + N I G V S+ I D + GA +D + ++ Sbjct: 644 LNLERLAS--NRNFTNKIWNAGKFVLYSLEEITHDERVALVDEGAALCADAASIAKLPLA 701 Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDR-----YFDAQKPW-------ELKKTNPDRAS 445 + I + + H +Q E R ++D+ W L + D A Sbjct: 702 ERWIVSKLNATVDHVTASQDRYDFGEAGRATYSFFYDSIADWFIEGAKSRLYGGDADAAR 761 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 VT+ V+ + LL FVP + +++ L Sbjct: 762 VTKAVTLYVLDRTLRLLHPFVPYVTEEVWQAL 793 >gi|116333862|ref|YP_795389.1| valyl-tRNA synthetase [Lactobacillus brevis ATCC 367] gi|116099209|gb|ABJ64358.1| valyl-tRNA synthetase [Lactobacillus brevis ATCC 367] Length = 888 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 9/185 (4%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLL 280 DP ++ W + +T G+ D +++P V G DI+ F + + + Sbjct: 451 DPD-VLDTWFSSALWPFSTMGWPDEDSADFKRYFPTSTLVTGYDIIFFWVSRMMFQSLEF 509 Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 + P K V HG I +G K+SKSLGN IDP+EVI++ G DALR+FL G+D Sbjct: 510 TGKRPF-KNVLLHGLIRDEEGRKMSKSLGNGIDPMEVIDKYGADALRWFLSTGSTAGQDV 568 Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESILSVCSRVL 398 + + N N I N SR V M L D ++P + +D+ ILS + + Sbjct: 569 RFSYTKMDAAWN--FINKIWN-ASRFVIMNLGDKTQPVLPAAETWDLTDKWILSRLNDTV 625 Query: 399 QEIRE 403 + + E Sbjct: 626 KHVTE 630 Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D+L R R+ G D L+ G D G K+ + Sbjct: 43 SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEAKLR 102 Query: 64 NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ KV + D + + M LD S + F T + D + Sbjct: 103 EQGISRYDLGREKFVEKVWEWKDEYADTIHKQWAKMGLSLDYSRERF--TLDDGLSDAVK 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G Y W A + + ++K G +Y+ ++ Sbjct: 161 KVFVTLYKKGLIYRGEYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 208 >gi|296331646|ref|ZP_06874115.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675395|ref|YP_003867067.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151241|gb|EFG92121.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413639|gb|ADM38758.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] Length = 880 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 27/278 (9%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P+D + ++ W + +T G+ D +++P D+ V G DI+ F Sbjct: 432 GLEAPEDSENWEQDSDVLDTWFSSALWPFSTMGWPDITAEDFKRYYPTDVLVTGYDIIFF 491 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + P K V HG I +G K+SKSLGN +DP++VI++ G D+LRY Sbjct: 492 WVSRMIFQGIEFTGERPF-KDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDKYGADSLRY 550 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL + G+D + + ++ N AN I N + L + DGM + G Sbjct: 551 FLATGSSPGQDLRFSYEKVESTWN--FANKIWN----ASRFALMNMDGMTYDELDLSGEK 604 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 + +D+ IL+ + ++ + + + + + + D Y + K L Sbjct: 605 SVADKWILTRLNETIEHVTQLADRYEFGEVGRHLYNFIWDDFCDWYIEMAK---LPLYGE 661 Query: 442 DRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D A+ T + V+ Q LL F+P L +I+ L Sbjct: 662 DEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHL 699 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G DVL+ G D G A A V Sbjct: 43 SVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAG-----IATQAKV 97 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ + SR F + Y DFIR T ++ Sbjct: 98 EAKLREEGKSRYDLGREKFLEETWKWKEEYADFIRSQWAKLGLGLDYSRERFTLDEGLSK 157 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 R ++ K+ +KG IY+G Y W A + + +YK G +Y+ + Sbjct: 158 AVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHMSY 208 >gi|119713330|gb|ABL97394.1| leucine-tRNA synthetase [uncultured marine bacterium EB80_02D08] Length = 804 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 8/194 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +REK Y + YP+ + H+GH I DV++R+ R++ +V G D G AA Sbjct: 30 DREKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYKRMNNFNVFQPMGWDAFGLPAENAA 89 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 V+ K + +QN + + L + YD +RT E ++ ++++KK D +Y Sbjct: 90 IANKVSPKEWTNQNIEHMKQQLISLGLGYDWSKELRTCEPEYYKWEQLIFKKFYDNNLVY 149 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 + + DE +++V G G AQ V+ E + +F +++ Y ++LL+ Sbjct: 150 RKKSMVNWDPVDETVLANEQVIDGK-GWRSGAQ---VEIKEIDQWFIKITDYAEELLTSL 205 Query: 181 ES--HPEFILPIER 192 + PE + ++R Sbjct: 206 DEVDWPENVKTMQR 219 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 10/101 (9%) Query: 239 LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKK 289 T++ D +K+W P DL++ G + H +Y F L+ N P KK Sbjct: 491 FTSSDNADQMFDKNSKYWLPVDLYIGGIEHAILHLLYSRFFHKALRDMGLVEGNEPF-KK 549 Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 + + G +L G K+SKS GN +DP IE+ G D +R +++ Sbjct: 550 LLTQGMVLKDGAKMSKSKGNTVDPQSYIEKYGADTVRLYMM 590 >gi|330684035|gb|EGG95792.1| valine--tRNA ligase [Staphylococcus epidermidis VCU121] Length = 656 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 118/261 (45%), Gaps = 18/261 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 223 VLDTWFSSALWPFSTLGWPDVEAEDFKRYFPTNALVTGYDIIFF----WVARMIFQGLEF 278 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL A G+D Sbjct: 279 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSAPGQDLR 338 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVL- 398 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 339 YSTEKVESVWN--FINKIWNAARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 396 Query: 399 --QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 ++ + + + RAL I D Y + K + + D+ T V V+ Sbjct: 397 TVTDLSDKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNGEDEDQKQTTRSVLSYVLD 454 Query: 457 QLAILLQAFVPKLANKIFDIL 477 ++ +L F+P + KI+ L Sbjct: 455 RIMRMLHPFMPFVTEKIWQSL 475 >gi|300721316|ref|YP_003710587.1| putative Aminoacyl-tRNA synthetase, class Ia:Cupin region [Xenorhabdus nematophila ATCC 19061] gi|297627804|emb|CBJ88335.1| putative Aminoacyl-tRNA synthetase, class Ia:Cupin region [Xenorhabdus nematophila ATCC 19061] Length = 670 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 117/546 (21%), Positives = 201/546 (36%), Gaps = 51/546 (9%) Query: 3 EREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +R L ST PN H+GH + + DVL R G V TG D++ + + Sbjct: 120 QRNTLIFSTPPT-PNGDLHLGHLSGPYLAGDVLKRVLLQSGTSVHHGTGRDDNQTYVVTS 178 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH-----HDTCRILWKK--IS 114 A D + + I +D FI + H +L+KK I Sbjct: 179 AAKEQRQPTESADFYASAINETWQGFGIDFDLFITPDNQGEYADFVHHYIELLYKKDFIY 238 Query: 115 DKGDIYKGCYSGWYSLRDEAYYNDDEVY--KGADGQYYNAQHNPVQWME----------- 161 +K + G + EAY + Y + +DG A P + + Sbjct: 239 EKETTAYVDHHG--NTLHEAYIHGLCPYCEESSDGNACEACGRPNECTDLKQPQVKADGN 296 Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 E +FRLSA+ +L Y ++ +P + L D+ +S + Sbjct: 297 QPLSRKEFRLYFRLSAFAHQLAQYVQTAN---MPAHVHQLCHDMLSQQLPDICISHAS-H 352 Query: 216 WGIK--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL--------HVIGK 265 WGIK +P+ Q ++YVW + YL G+ AD+ H G Sbjct: 353 WGIKHRLPNYEQQVVYVWFEMAMGYLWAASEYPTSRGNNRMEKAADVYSGDTNIVHCYGF 412 Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325 D +H + +PA + L P+ + + +G K S S ++I + ++ G D Sbjct: 413 DNAYYHTLLFPAIYFALGLTPPQTHIVNELLDLEGSKFSTSRRHLIWGKDFLKLAGADYA 472 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385 R L+ G + + + +NA + + +S +++ Y G IP GA+ Sbjct: 473 RMALILMRPEGIRENFSVERVAATMNALFPQRLSHWLSSLQECVMR-YGGKIPESGAWLA 531 Query: 386 SDESILSVCSRVLQEIRENMQNQLI--HRALAQVISLVSEVDRYFDAQKPWELKKTNP-- 441 ++ V+ + Q + R V L+ R+ +Q+ + +N Sbjct: 532 DQKNHYYELLHVMTSYQHFSQTENFSPRRMAEHVTKLIDMAYRFNASQRHLFPRNSNALS 591 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML-- 499 + A T L + V R L L+ +P L+ I +L + +Q L M+ Sbjct: 592 NYARTALALDVLAARMLVYALKPLMPALSADIAALLRINATEETWQQATTFLASQHMIQP 651 Query: 500 HKTFDP 505 HK P Sbjct: 652 HKIMLP 657 >gi|312136980|ref|YP_004004317.1| leucyl-tRNA synthetase [Methanothermus fervidus DSM 2088] gi|311224699|gb|ADP77555.1| leucyl-tRNA synthetase [Methanothermus fervidus DSM 2088] Length = 931 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 82/319 (25%), Positives = 141/319 (44%), Gaps = 49/319 (15%) Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA------------ 234 I+P E R + F+K LKD + +RK G K+P D ++I+ D+ Sbjct: 469 IVPDEIRQNIEYFIK-WLKDWACARK-IGLGTKLPWDKRWIVEPLTDSTIYMAYYTIAHK 526 Query: 235 --------LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP- 285 L + +L+NPD A ++P D + KD++ H + F SA P Sbjct: 527 IKEKDHEELNSEYFDEVFLNNPDEEFAYWYPLDWRLSAKDLIGNHLTF-HIFHHSAIFPE 585 Query: 286 --LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 PK + G L +G+K+S S GN++ E I E G D +R FL+ +D + K Sbjct: 586 DKWPKGIVVFGMGLLEGQKMSSSKGNIVTLSEAISEYGADVVRMFLMSSAEPWQDFDWRK 645 Query: 344 D---GLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398 G+K+R+ +L I + + L+ P F ++ ILS ++ + Sbjct: 646 KEVIGVKRRIEQFFELYEKIDEKIGLNFENKLE------IRPKKFI--NKWILSQVNQRI 697 Query: 399 QEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIR 456 + + E ++ +AL + L +VD Y KPW EL++T + V++ Sbjct: 698 KNVTEALEKFQTRKALQEGFFLFRKDVDHYLKRVKPWIELEETKE--------ILRYVMK 749 Query: 457 QLAILLQAFVPKLANKIFD 475 L+ F+P +A +I++ Sbjct: 750 VWVKLVAPFIPHIAEEIWE 768 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 33/61 (54%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++K++I+ A YP+ H+GH + DV ARF R+ G +VLF G + A Sbjct: 26 DKKKIFITVAYPYPSGAMHVGHGRTYTVPDVYARFKRMQGYNVLFPMAWHVTGAPVVGIA 85 Query: 63 Q 63 + Sbjct: 86 K 86 >gi|281492830|ref|YP_003354810.1| valyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] gi|281376482|gb|ADA65968.1| Valyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] Length = 880 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/275 (26%), Positives = 120/275 (43%), Gaps = 40/275 (14%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + Sbjct: 443 VLDTWFSSALWPFSTMGWPDENAEDFKRYYPTSTLVTGYDIIPFWVSRMIFQGLEFTGKS 502 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K+ HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D + Sbjct: 503 PF-KRALIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGTDALRWFLSNGSAPGQDVRFSY 561 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 D + N N I N VSR + M +D S +++ S ++V + Sbjct: 562 DKMDAAWN--FINKIWN-VSRYILMNAEDV------------SADAVSSALTKVANKTAG 606 Query: 404 NMQNQLIHRALAQVISLVSE-VDRY-------------FDAQKPWELKKT-----NPDRA 444 N+ ++ I L + V+E +D++ +D W L+ T D A Sbjct: 607 NVTDRWILTRLNDTVERVTEQMDKFEFGVAGHILYNFIWDEFANWYLELTKEVMFGEDEA 666 Query: 445 STVLY--VTVEVIRQLAILLQAFVPKLANKIFDIL 477 + V + V+ Q+ LL +P +IF+ L Sbjct: 667 EKDITRAVLLHVLDQVLRLLHPIMPFFTEEIFEKL 701 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 23/164 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+A Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVAARLA 99 Query: 64 NAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 G+ + + D+ + ++ + IS D+ R T ++ R Sbjct: 100 EDGILPQDLGREKFLDKVWEWKDEYATTIKEQWGKMGISV-DYSRERFTLDEGLSQAVRK 158 Query: 109 LWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYN 151 ++ ++ +KG IY+G W A + + ++K DG +Y+ Sbjct: 159 VFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIHKEIDGAFYH 202 >gi|269123133|ref|YP_003305710.1| leucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112] gi|268314459|gb|ACZ00833.1| leucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112] Length = 865 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 11/199 (5%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +K +E Y AYP+ + H GH I D +AR+ ++ G +VL T G D G Sbjct: 30 VKGKENYYTLEMFAYPSGKLHAGHLRNYTIGDAIARYKKMKGFNVLHTFGWDSFGLPAEN 89 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118 AA + G + ++ QN N + ++ +SY D + T +K ++ + + ++ KG Sbjct: 90 AAIDNGASPAIWTAQNIGNMKRQLKLMGLSYDWDRELATYKKEYYKFNQKFFIEMYKKGL 149 Query: 119 IYK-GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 +YK Y W + N+ + DG+ + V E ++F+++ Y ++LL Sbjct: 150 VYKRKSYVNWCPDCNTVLANE----QVEDGKCWRHGKTSVIQKELSQWYFKITDYAEELL 205 Query: 178 SYYES----HPEFILPIER 192 + +E PE +L +++ Sbjct: 206 TGHEELKGYWPEQVLAMQK 224 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 91/183 (49%), Gaps = 13/183 (7%) Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA-DL 354 ++ K EK+SKS N +DP ++I+E G DA R F + K+ ++ +G+ V A Sbjct: 609 LVSKLEKMSKSKNNGVDPEKIIQEFGADAARIFTLFAAPPEKELEWNANGV---VGAYRF 665 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRA 413 N I +V + ++++DY + ++ DE++ + ++ + ++M++ + A Sbjct: 666 INRIYLMVQECLDILIEDYSEI--DLSKRSKEDENLQRKTHQTIKRVTDSMEDNFHFNTA 723 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 +A + L++E+ Y K L N S ++ E + L +++ F P LA +I Sbjct: 724 IAGSMELINELTTY----KQNVLDVNNKSSESNKVF--KESMISLILMMSPFAPHLAEEI 777 Query: 474 FDI 476 + + Sbjct: 778 WQL 780 >gi|269798025|ref|YP_003311925.1| leucyl-tRNA synthetase [Veillonella parvula DSM 2008] gi|269094654|gb|ACZ24645.1| leucyl-tRNA synthetase [Veillonella parvula DSM 2008] Length = 822 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 8/180 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + +EK Y+ YP+ H+GH I DV+ARF ++ G +VL G D G A Sbjct: 30 ESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMKGFNVLHPMGWDSFGMPAENA 89 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119 A G+ K + N N + L +SY D + T ++ ++ + +++ KG Sbjct: 90 AIKHGIAPKTWTLDNIENMKLQQKALGLSYDWDREVATCKEDYYKWTQWFFEQFYKKGLA 149 Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 YK W N+ + DG + NPV+ + +F R++ Y D+LL+ Sbjct: 150 YKKEAKVNWCETCHTVLANEQVI----DGACWRCD-NPVEKKDLSQWFLRITEYADRLLT 204 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 28/203 (13%) Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 L+ AN P + + + G +L +G K+SKS GNV+ P E+I G D R F++ +D Sbjct: 560 LIEANEPF-RGLLTQGMVLKEGSKMSKSKGNVVSPEEIINTYGADTARLFILFAAPVDRD 618 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSR 396 + G++ G + R V I+ Y + G T+ + ++ R Sbjct: 619 LDWSDQGVE---------GSYRFLGR-VWRIVDTYNEEAKKNVTGELTKDEFALRRELHR 668 Query: 397 VLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV-LYVTVEV 454 V++++ E++ N + A++ ++ LV+ + Y D+A T+ + E+ Sbjct: 669 VIKKVTEDLDNNFNFNTAISAIMELVNAMYAY-------------KDKAETINSALANEL 715 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 R L +LL FVP + +++ L Sbjct: 716 TRSLLLLLAPFVPHITEELWHEL 738 >gi|310657932|ref|YP_003935653.1| valyl-tRNA synthetase [Clostridium sticklandii DSM 519] gi|308824710|emb|CBH20748.1| valyl-tRNA synthetase [Clostridium sticklandii] Length = 884 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 122/265 (46%), Gaps = 25/265 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ KF+P + V G DI+ F I + SA L Sbjct: 449 VLDTWFSSALWPFSTLGWPQQT-AEMLKFYPTSVLVTGYDIIFFWVI---RMVFSALYVL 504 Query: 287 PKKVFSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GF 340 + FSH FI +G K+SKSLGN IDP+E+I+ G DALR+ L + G D F Sbjct: 505 DEVPFSHVFIHGLVRDSEGRKMSKSLGNGIDPLEIIDTYGADALRFTLATGNSPGNDMRF 564 Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYD----GMIPTPGAFTESDESILSVC 394 Y +RV A + AN I N SR + M L++ A SD+ I+S Sbjct: 565 Y-----MERVEASRNFANKIWN-ASRFIFMNLENSQKKEFKREDVNEALELSDKWIISRV 618 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + + +E+ ENM + A+++V SE D Y + K L + + +Y Sbjct: 619 NSLSKEMTENMDKFELGIAVSKVYDFAWSEFCDWYIELVKQ-RLYSEDSISKDSAVYTLT 677 Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477 V+ ++ LL F+P + +I+ + Sbjct: 678 YVLEKILKLLHPFMPFITEEIWSYM 702 >gi|257417098|ref|ZP_05594092.1| valyl-tRNA synthetase [Enterococcus faecalis AR01/DG] gi|257158926|gb|EEU88886.1| valyl-tRNA synthetase [Enterococcus faecalis ARO1/DG] Length = 880 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 45/345 (13%) Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F ++ +K + E+ EF P R N+ + D +SR+ + WG +IP Sbjct: 363 WFVKMGPLAEKAIENQETEDAVEFYPP--RFNQTFLRWMENIHDWVISRQLW-WGHQIPA 419 Query: 222 -------------DDP---------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 ++P ++ W + +T G+ D +++P Sbjct: 420 WYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTS 479 Query: 260 LHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316 V G DI+ F + + + + P + V HG I +G K+SKSLGN IDP++V Sbjct: 480 TLVTGYDIIAFWVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDV 538 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 IE+ G DALR+FL A G+D + + + N N I N SR V M + +GM Sbjct: 539 IEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGM 592 Query: 377 ----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G T +D IL+ + + + E A Q+ + + + D Y + Sbjct: 593 TAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEM 652 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 K L N T + V + Q+ LL +P + +I++ Sbjct: 653 SKE-ILYGENEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|302874832|ref|YP_003843465.1| valyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|307690548|ref|ZP_07632994.1| valyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|302577689|gb|ADL51701.1| valyl-tRNA synthetase [Clostridium cellulovorans 743B] Length = 880 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 71/263 (26%), Positives = 124/263 (47%), Gaps = 30/263 (11%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D + + ++P D+ V G DI+ F W A ++ + + Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTEDLEY-YYPTDVLVTGYDIIFF----WVARMIFSGIHN 505 Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + H ++H G K+SKSLGN +DP+EVI+ G DALR+ L+ + G D Sbjct: 506 MDETPFHTVLIHGLVRAEDGRKMSKSLGNGVDPLEVIDTYGADALRFMLITGNSPGNDIR 565 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQ 399 + D ++ N AN I N SR V M L D ++ +D+ ILS + +++ Sbjct: 566 FKMDKVESARN--FANKIWN-ASRFVMMNLDMDLVNKYKDSTKYSVADKWILSRFNTLVK 622 Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRASTVLYVTVEVI 455 E+ EN+ + A ++ + D Y + KP W + + A V+Y V+ Sbjct: 623 EVTENIDKYELGIAGQKIYDFMWTEFCDWYIELTKPVLW----SEDEEAKGVVY---NVL 675 Query: 456 RQLAI----LLQAFVPKLANKIF 474 R++ I LL +P + +I+ Sbjct: 676 RKVLIGGLQLLHPIMPYITEEIY 698 >gi|227544234|ref|ZP_03974283.1| valyl-tRNA synthetase [Lactobacillus reuteri CF48-3A] gi|300908230|ref|ZP_07125696.1| valine--tRNA ligase [Lactobacillus reuteri SD2112] gi|227185787|gb|EEI65858.1| valyl-tRNA synthetase [Lactobacillus reuteri CF48-3A] gi|300894657|gb|EFK88013.1| valine--tRNA ligase [Lactobacillus reuteri SD2112] Length = 907 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 14/197 (7%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ + +++P + V G DI+ F Sbjct: 458 GMEAPKDAENWEQDKDVLDTWFSSALWPFSTMGWPNTDSADFKRYFPTNTLVTGYDIIFF 517 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P K V HG I +G K+SKSLGN IDP++VI++ GVDALR+ Sbjct: 518 WVSRMIFQSLEFTGQAPF-KNVLLHGLIRDEQGRKMSKSLGNGIDPMDVIKKYGVDALRW 576 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386 FL+ G+D + + N N I N SR V M L + ++P + + Sbjct: 577 FLITGSTPGQDIRFSYTKMDAAWN--FINKIWN-ASRYVIMNLGEMPAPVLPDKSKWDLA 633 Query: 387 DESILSVCSRVLQEIRE 403 D ILS + ++++ E Sbjct: 634 DRWILSRLNATVKQVNE 650 Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 21/166 (12%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G DVL+ G D G K+ + Sbjct: 64 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGYDVLWVPGMDHAGIATQAKVEARLR 123 Query: 64 NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109 G++ FV Q + AD+ + + YD T ++ + R + Sbjct: 124 KQGISRYDLGRDKFVQQVWDWKDEYADIIHQQWAKMGISVDYDHERFTLDEGLNKAVRKV 183 Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + + +KG IY+G Y W A + + ++K G +Y+ ++ Sbjct: 184 FVDLYNKGLIYRGTYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 229 >gi|126656563|ref|ZP_01727824.1| valyl-tRNA synthetase [Cyanothece sp. CCY0110] gi|126622249|gb|EAZ92956.1| valyl-tRNA synthetase [Cyanothece sp. CCY0110] Length = 907 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 81/290 (27%), Positives = 133/290 (45%), Gaps = 30/290 (10%) Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266 L ++K + I++ DP ++ W + +T G+ +N + ++P V G D Sbjct: 447 LEKAKKEYGNDIQLEQDPD-VLDTWFSSGLWPFSTLGWPENTEDLNT-YYPTSTLVTGFD 504 Query: 267 ILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323 I+ F + A + +P K V+ HG + G+K+SKS N IDP+ +IE+ G D Sbjct: 505 IIFFWVARMTMMAGYFTDQMPF-KDVYIHGLVRDENGKKMSKSANNGIDPLILIEKYGTD 563 Query: 324 ALRYFLVREIA-CGKD---GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMI 377 ALRY L+RE+A G+D + K + V A + AN + N +R V M LK G Sbjct: 564 ALRYTLIREVAGAGQDISLQYDRKTDQSESVEASRNFANKLWN-AARFVMMHLK---GET 619 Query: 378 PTPGAFTE------SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFD 429 P E SD+ ILS + +Q+ RE+++ + A + + D Y + Sbjct: 620 PQSLGTPEIDKLELSDKWILSRFHQTVQQTREDIEAYGLGEAAKGLYEFIWGDFCDWYIE 679 Query: 430 AQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K WE + T+ YV ++ LL F+P + +I+ L Sbjct: 680 LVKTRLWEETPSRDVARQTLAYVLDGTLK----LLHPFMPHITEEIWQTL 725 >gi|148543739|ref|YP_001271109.1| valyl-tRNA synthetase [Lactobacillus reuteri DSM 20016] gi|184153145|ref|YP_001841486.1| valyl-tRNA synthetase [Lactobacillus reuteri JCM 1112] gi|227363281|ref|ZP_03847413.1| valyl-tRNA synthetase [Lactobacillus reuteri MM2-3] gi|325682111|ref|ZP_08161629.1| valine--tRNA ligase [Lactobacillus reuteri MM4-1A] gi|148530773|gb|ABQ82772.1| valyl-tRNA synthetase [Lactobacillus reuteri DSM 20016] gi|183224489|dbj|BAG25006.1| valyl-tRNA synthase [Lactobacillus reuteri JCM 1112] gi|227071737|gb|EEI10028.1| valyl-tRNA synthetase [Lactobacillus reuteri MM2-3] gi|324978755|gb|EGC15704.1| valine--tRNA ligase [Lactobacillus reuteri MM4-1A] Length = 884 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 14/197 (7%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ + +++P + V G DI+ F Sbjct: 435 GMEAPKDAENWEQDKDVLDTWFSSALWPFSTMGWPNTDSADFKRYFPTNTLVTGYDIIFF 494 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P K V HG I +G K+SKSLGN IDP++VI++ GVDALR+ Sbjct: 495 WVSRMIFQSLEFTGRAPF-KNVLLHGLIRDEQGRKMSKSLGNGIDPMDVIKKYGVDALRW 553 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386 FL+ G+D + + N N I N SR V M L + ++P + + Sbjct: 554 FLITGSTPGQDIRFSYTKMDAAWN--FINKIWN-ASRYVIMNLGEMPAPVLPDKSKWDLA 610 Query: 387 DESILSVCSRVLQEIRE 403 D ILS + ++++ E Sbjct: 611 DRWILSRLNATVKQVNE 627 Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 21/166 (12%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G DVL+ G D G K+ + Sbjct: 41 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGYDVLWVPGMDHAGIATQAKVEARLR 100 Query: 64 NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109 G++ FV Q + AD+ + + YD T ++ + R + Sbjct: 101 KQGISRYDLGRDKFVQQVWDWKDEYADIIHQQWAKMGISVDYDRERFTLDEGLNKAVRKV 160 Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + + +KG IY+G Y W A + + ++K G +Y+ ++ Sbjct: 161 FVDLYNKGLIYRGTYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 206 >gi|221638390|ref|YP_002524652.1| valyl-tRNA synthetase [Rhodobacter sphaeroides KD131] gi|254783556|sp|B9KMT9|SYV_RHOSK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|221159171|gb|ACM00151.1| Valyl-tRNA synthetase [Rhodobacter sphaeroides KD131] Length = 987 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 30/167 (17%) Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY-VWIDA------LTNYL 239 ++ + R E I + L D +L+ +DP +++Y VW D ++ L Sbjct: 519 VIEVASRAEAIDRLAQALADYNLN-----------EDPTHLVYPVWRDPDVLDTWFSSGL 567 Query: 240 TTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFS 292 G L P+ + A+++P ++ + G DI+ +W A ++ L + K V+ Sbjct: 568 WPIGTLGWPEETPELARYFPTNVLITGFDII----FFWVARMMMMQLAVVNEVPFKTVYV 623 Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 H + KG+K+SKSLGNV+DP+E+I+E G DA+R+ L A G+D Sbjct: 624 HALVRDEKGKKMSKSLGNVLDPLELIDEFGADAVRFTLTAMAAMGRD 670 Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75 H+GHA+ + D+L R+HR+ G D L+ G D +AG+ T++ V++ Sbjct: 52 HMGHAFNNTLQDILTRWHRMRGFDTLWQPGQD-----------HAGIATQMVVER 95 >gi|147678155|ref|YP_001212370.1| isoleucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] gi|146274252|dbj|BAF60001.1| isoleucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] Length = 932 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 7/106 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 IM VW D+ T+++ G LD P WPADL++ G D R F++ + ++ Sbjct: 528 IMDVWFDSGTSHM---GVLDEPSIWPDLRWPADLYLEGSDQHRGWFNSSLSTSVAVTGQA 584 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 P + V +HGF++ +G K+SKSLGNVIDP +VI+++G D LR ++ Sbjct: 585 PY-RMVLTHGFVVDEQGRKMSKSLGNVIDPAKVIKQMGADILRLWV 629 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 21/161 (13%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K R K + Y N H+G A I+ D++ +FH +DG D + G D HG I + Sbjct: 48 KGRPKFILHDGPPYANGHIHLGTALNKILKDIIVKFHSMDGYDAPYVPGWDTHGLPIEQQ 107 Query: 62 AQNA-GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR----------------HHD 104 A A G+ D + FR + + D R KR H++ Sbjct: 108 AIKAFGLNRH---DIHPVEFRRKCKEFALKFVDIQREEFKRLGVRGQWDKPYLTLMPHYE 164 Query: 105 TCRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +I ++ +++ KG IYKG ++ E + EV G Sbjct: 165 ARQIGVFGEMARKGYIYKGLKPVYWCAACETALAEAEVEYG 205 >gi|302551406|ref|ZP_07303748.1| valyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] gi|302469024|gb|EFL32117.1| valyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] Length = 880 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 7/178 (3%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284 ++ W + +T G+ + + S AKF+P + V G DIL F F L A Sbjct: 456 VLDTWFSSGLWPFSTLGWPEQTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 514 Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P + HG + + G+K+SKS GN ++P++ +++ G DALR+ L R G D + Sbjct: 515 PPFHTIALHGMVRDQFGKKMSKSFGNAVNPLDWMDKYGSDALRFTLARGANPGVDVPIGE 574 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 D ++ N AN I N +R M DG +P P + +D ILS + V+ E+ Sbjct: 575 DWVQGSRN--FANKIWN-ATRFAMMNGATVDGPLPDPSKMSATDRWILSRLNTVVAEV 629 >gi|270290996|ref|ZP_06197219.1| valyl-tRNA synthetase [Pediococcus acidilactici 7_4] gi|270280392|gb|EFA26227.1| valyl-tRNA synthetase [Pediococcus acidilactici 7_4] Length = 887 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 86/186 (46%), Gaps = 15/186 (8%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 DP ++ W + TT G+ D +++P V G DI+ F W A ++ Sbjct: 450 DPD-VLDTWFSSALWPFTTMGWPDENAADFKRYFPTSTLVTGYDIIFF----WVARMIFQ 504 Query: 283 NLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 +L K V HG I +G K+SKSLGN IDP++VI++ G DALR+FL G Sbjct: 505 SLKFTGKRPFKDVLLHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSTAG 564 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395 +D + + N N I N SR V M L D +P +D ILS + Sbjct: 565 QDLRFSYTKMDAAWN--FINKIWN-ASRYVIMNLDQVDKPQLPALNELNLADRWILSRLN 621 Query: 396 RVLQEI 401 ++++ Sbjct: 622 HTVEQV 627 >gi|304385268|ref|ZP_07367613.1| valine--tRNA ligase [Pediococcus acidilactici DSM 20284] gi|304328475|gb|EFL95696.1| valine--tRNA ligase [Pediococcus acidilactici DSM 20284] Length = 887 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 86/186 (46%), Gaps = 15/186 (8%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 DP ++ W + TT G+ D +++P V G DI+ F W A ++ Sbjct: 450 DPD-VLDTWFSSALWPFTTMGWPDENAADFKRYFPTSTLVTGYDIIFF----WVARMIFQ 504 Query: 283 NLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 +L K V HG I +G K+SKSLGN IDP++VI++ G DALR+FL G Sbjct: 505 SLKFTGKRPFKDVLLHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSTAG 564 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395 +D + + N N I N SR V M L D +P +D ILS + Sbjct: 565 QDLRFSYTKMDAAWN--FINKIWN-ASRYVIMNLDQVDKPQLPALNELNLADRWILSRLN 621 Query: 396 RVLQEI 401 ++++ Sbjct: 622 HTVEQV 627 >gi|329573413|gb|EGG55023.1| valine--tRNA ligase [Enterococcus faecalis TX1467] Length = 829 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 74/276 (26%), Positives = 120/276 (43%), Gaps = 29/276 (10%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P V G DI+ F Sbjct: 380 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIAF 439 Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ +L + V HG I +G K+SKSLGN IDP++VIE+ G DA Sbjct: 440 ----WVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADA 495 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380 LR+FL A G+D + + + N N I N SR V M + +GM I Sbjct: 496 LRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFS 549 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438 G T +D IL+ + + + E A Q+ + + + D Y + K L Sbjct: 550 GEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYG 608 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 N T + V + Q+ LL +P + +I+ Sbjct: 609 DNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIW 644 Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 23/155 (14%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-----TKV 71 H+GHA++ + D++ R R+ G D L+ G D G K+ + G++ + Sbjct: 4 HLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLAQQGISRYDLGREK 63 Query: 72 FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 FVDQ + M LD S + F T ++ + R ++ + +K IY Sbjct: 64 FVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVRKVFVSLYEKDLIY 121 Query: 121 KGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 +G Y + + + +D EV +K +G +Y+ + Sbjct: 122 RGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 156 >gi|257088072|ref|ZP_05582433.1| valyl-tRNA synthetase [Enterococcus faecalis D6] gi|256996102|gb|EEU83404.1| valyl-tRNA synthetase [Enterococcus faecalis D6] gi|315028135|gb|EFT40067.1| valyl-tRNA synthetase [Enterococcus faecalis TX2137] Length = 880 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P V G DI+ F Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIAF 490 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P + V HG I +G K+SKSLGN IDP++VIE+ G DALR+ Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL A G+D + + + N N I N SR V M + +GM I G Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 T +D IL+ + + + E A Q+ + + + D Y + K L N Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGDNE 662 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 T + V + Q+ LL +P + +I++ Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|294791905|ref|ZP_06757053.1| leucine--tRNA ligase [Veillonella sp. 6_1_27] gi|294457135|gb|EFG25497.1| leucine--tRNA ligase [Veillonella sp. 6_1_27] Length = 822 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 8/180 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + +EK Y+ YP+ H+GH I DV+ARF ++ G +VL G D G A Sbjct: 30 ESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMKGFNVLHPMGWDSFGMPAENA 89 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119 A G+ K + N N + L +SY D + T ++ ++ + +++ KG Sbjct: 90 AIKHGIAPKTWTLDNIENMKLQQKALGLSYDWDREVATCKEDYYKWTQWFFEQFYKKGLA 149 Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 YK W N+ + DG + NPV+ + +F R++ Y D+LL+ Sbjct: 150 YKKEAKVNWCETCHTVLANEQVI----DGACWRCD-NPVEKKDLSQWFLRITEYADRLLA 204 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 28/203 (13%) Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 L+ AN P + + + G +L +G K+SKS GNV+ P E+I G D R F++ +D Sbjct: 560 LIEANEPF-RGLLTQGMVLKEGSKMSKSKGNVVSPEEIINTYGADTARLFILFAAPVDRD 618 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSR 396 + G++ G + R V I+ Y + G T+ + + R Sbjct: 619 LDWSDQGVE---------GSYRFLGR-VWRIIDAYNEEAKKNVTGELTKDEFGLRRELHR 668 Query: 397 VLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV-LYVTVEV 454 V++++ E++ N + A++ ++ LV+ + + D+A T+ + E+ Sbjct: 669 VIKKVTEDLDNNFNFNTAISAIMELVNAM-------------YAHKDKAETINSALANEL 715 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 R L +LL FVP + +++ L Sbjct: 716 TRSLLLLLAPFVPHITEELWHEL 738 >gi|256962803|ref|ZP_05566974.1| valyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|307272656|ref|ZP_07553904.1| valyl-tRNA synthetase [Enterococcus faecalis TX0855] gi|256953299|gb|EEU69931.1| valyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|306510651|gb|EFM79673.1| valyl-tRNA synthetase [Enterococcus faecalis TX0855] Length = 880 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P V G DI+ F Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIAF 490 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P + V HG I +G K+SKSLGN IDP++VIE+ G DALR+ Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL A G+D + + + N N I N SR V M + +GM I G Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 T +D IL+ + + + E A Q+ + + + D Y + K L N Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGDNE 662 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 T + V + Q+ LL +P + +I++ Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|167947058|ref|ZP_02534132.1| Methionyl-tRNA synthetase, class Ia [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 367 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/353 (19%), Positives = 132/353 (37%), Gaps = 32/353 (9%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76 N HIGH E I D+ ARF ++ G + D HG I A+ G+ + + + Sbjct: 2 NGPIHIGHLVEYIQTDIWARFQKMRGHQCHYVCADDAHGTPIMLRARQEGIEPEALIARV 61 Query: 77 SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYY 136 S + I +D++ T + + + + ++++ D G I K + Y + + Sbjct: 62 SEEHQADFAAFRIGFDNYHSTHSEENRELSKTIYERNRDAGHIAKRMITQAYDPVETMFL 121 Query: 137 NDDEVYK-----GADGQY------YNAQHNPVQW--------------MEEEGYFFRLSA 171 D + GA+ QY A ++P + E + YFF+L+ Sbjct: 122 PDRFIKGTCPKCGAEDQYGDNCEICGASYSPAELKDPVSAVSGAKPEERESDHYFFKLAN 181 Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231 ++ L ++ P ++ V+ +G+ L R + P ++ Sbjct: 182 FEAMLKQWHPCRPPAAGDGQQARRVVRVWPAGVGHLP-RRPLLRFRDPRPSRQVFLCLCS 240 Query: 232 IDALTNYLTTTGYLDNPDGSKA------KFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285 +L + ++ P G ++ P + + A Sbjct: 241 THQSATWLASRTSVNAPRGWRSTTTGRPTPTPRSITSSARTSSTSTACSGRQCWRGPGFR 300 Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 P VF+HGF+ G+K+SKS G I ++ + + LRY+ ++ G D Sbjct: 301 KPTAVFAHGFLTVDGQKMSKSRGTFIKARTYLDHLNPEYLRYYFAAKLGAGVD 353 >gi|150021444|ref|YP_001306798.1| valyl-tRNA synthetase [Thermosipho melanesiensis BI429] gi|149793965|gb|ABR31413.1| valyl-tRNA synthetase [Thermosipho melanesiensis BI429] Length = 866 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 74/267 (27%), Positives = 124/267 (46%), Gaps = 26/267 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ P+ +K +F+P D+ V G DI+ F W A ++ Sbjct: 449 VLDTWFSSALWPFSTLGW---PNETKDLKEFYPTDVLVTGFDIIFF----WVARMIMMGY 501 Query: 285 P-LPKKVFS----HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 + +K FS H + K G K+SKSLGN IDPIEVIEE G D +R+ L A G+D Sbjct: 502 EFMDEKPFSDVYIHQLVRDKFGRKMSKSLGNGIDPIEVIEEYGADPMRFSLSTLAAQGRD 561 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398 D ++ + AN I N +R V + L+D+ SD+ ILS + + Sbjct: 562 IKLDLKHIE--TSKKFANKIWN-ATRFVILNLEDFQKQ--DLDNLNLSDKWILSRLQKTI 616 Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 + + ++N + A ++ + + D Y + KP + + S V V V V+ Sbjct: 617 KNVTHAIENYEFNVAAKEIYNFFWDELCDWYIEISKP----RLKTNERSLVQNVLVYVLD 672 Query: 457 QLAILLQAFVPKLANKIFDILFVADEN 483 LL +P + +++ L + E+ Sbjct: 673 NSLKLLHPIMPFITEELWQKLPTSGES 699 Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 S I PN + H+GHA + + D+L R+ R++G L+ G D G Sbjct: 40 SIVIPPPNITGKIHMGHALNITLQDILTRYKRMNGFKTLWLPGEDHAG 87 >gi|152976875|ref|YP_001376392.1| valyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025627|gb|ABS23397.1| valyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98] Length = 881 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 83/347 (23%), Positives = 150/347 (43%), Gaps = 44/347 (12%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F ++ +K ++ + E + + R N + ++++ + D +SR+ + WG +IP Sbjct: 364 WFVKMGPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +++ D Sbjct: 422 WYHKETGEVYVGTEAPADIENWEQDNDVLDTWFSSALWPFSTLGWPNEDAKDFKRYYSTD 481 Query: 260 LHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316 V G DI+ F + + + P K V HG + +G K+SKSLGN IDP++V Sbjct: 482 ALVTGYDIIFFWVSRMIFQGLEFTGERPF-KDVLIHGLVRDEQGRKMSKSLGNGIDPMDV 540 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--YD 374 I++ G DA+R+FL A G+D + + ++ N N I N SR V M + D Y+ Sbjct: 541 IDKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYE 597 Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK 432 I G + +D+ IL+ + ++ + NM A + + + + D Y + K Sbjct: 598 D-IDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAK 656 Query: 433 PWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L D A+ T V V+ Q LL F+P + KI+ L Sbjct: 657 ---LPLYGEDEAAKKTTRSVLAYVLDQTMRLLHPFMPFVTEKIWQHL 700 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G K+ + Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAKVEAKLR 102 Query: 64 NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + + + + + LD S + F T ++ D + Sbjct: 103 EEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERF--TLDEGLSDAVK 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKDVQGAFYHMNY 208 >gi|126461470|ref|YP_001042584.1| valyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] gi|166225527|sp|A3PHJ6|SYV_RHOS1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|126103134|gb|ABN75812.1| valyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] Length = 987 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 30/167 (17%) Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY-VWIDA------LTNYL 239 ++ + R E I + L D +L+ +DP +++Y VW D ++ L Sbjct: 519 VVEVASRAEAIDRLAQALADYNLN-----------EDPTHLVYPVWRDPDVLDTWFSSGL 567 Query: 240 TTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFS 292 G L P+ + A+++P ++ + G DI+ +W A ++ L + K V+ Sbjct: 568 WPIGTLGWPEETPELARYFPTNVLITGFDII----FFWVARMMMMQLAVVNEVPFKTVYV 623 Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 H + KG+K+SKSLGNV+DP+E+I+E G DA+R+ L A G+D Sbjct: 624 HALVRDEKGKKMSKSLGNVLDPLELIDEFGADAVRFTLTAMAAMGRD 670 Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75 H+GHA+ + D+L R+HR+ G D L+ G D +AG+ T++ V++ Sbjct: 52 HMGHAFNNTLQDILTRWHRMRGFDTLWQPGQD-----------HAGIATQMVVER 95 >gi|294793765|ref|ZP_06758902.1| leucine--tRNA ligase [Veillonella sp. 3_1_44] gi|294455335|gb|EFG23707.1| leucine--tRNA ligase [Veillonella sp. 3_1_44] Length = 822 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 8/180 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + +EK Y+ YP+ H+GH I DV+ARF ++ G +VL G D G A Sbjct: 30 ESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMKGFNVLHPMGWDSFGMPAENA 89 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119 A G+ K + N N + L +SY D + T ++ ++ + +++ KG Sbjct: 90 AIKHGIAPKTWTLDNIENMKLQQKALGLSYDWDREVATCKEDYYKWTQWFFQQFYKKGLA 149 Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 YK W N+ + DG + NPV+ + +F R++ Y D+LL+ Sbjct: 150 YKKEAKVNWCETCHTVLANEQVI----DGVCWRCD-NPVEKKDLSQWFLRITEYADRLLT 204 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 28/203 (13%) Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 L+ AN P + + + G +L +G K+SKS GNV+ P E+I G D R F++ +D Sbjct: 560 LIEANEPF-RGLLTQGMVLKEGSKMSKSKGNVVSPEEIINTYGADTARLFILFAAPVDRD 618 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSR 396 + G++ G + R V I+ Y + G T+ + + R Sbjct: 619 LDWSDQGVE---------GSYRFLGR-VWRIIDAYNEEAKKNVTGELTKDEFGLRRELHR 668 Query: 397 VLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV-LYVTVEV 454 V++++ E++ N + A++ ++ LV+ + + D+A T+ + E+ Sbjct: 669 VIKKVTEDLDNNFNFNTAISAIMELVNAM-------------YAHKDKAETINSALANEL 715 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 R L +LL FVP + +++ L Sbjct: 716 TRSLLLLLAPFVPHITEELWHEL 738 >gi|295425100|ref|ZP_06817805.1| valine--tRNA ligase [Lactobacillus amylolyticus DSM 11664] gi|295065159|gb|EFG56062.1| valine--tRNA ligase [Lactobacillus amylolyticus DSM 11664] Length = 890 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 113/269 (42%), Gaps = 41/269 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ +K+L ++ + ER + + D +SR+ + WG +IP Sbjct: 371 WFVKMKPLAEKVLENQKTEGKVNFVPERFEHTLEQWMGDVHDWCISRQLW-WGHRIPAWY 429 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D +++P + Sbjct: 430 NKKTGETYVGEEAPKDIENWDQDPD-VLDTWFSSALWPFSTLGWPDTNADDFKRYFPTNA 488 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILH-KGEKISKSLGNVIDPI 314 V G DI+ F W + ++ +L K V HG + +G K+SKSLGN +DP+ Sbjct: 489 LVTGYDIIFF----WVSRMIFQSLHFTHERPFKDVVLHGLMRDPQGRKMSKSLGNGVDPM 544 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK--D 372 +V+ + G DALR+FL+ A G+D YD L N N I N SR V M L Sbjct: 545 DVVNKYGCDALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPADA 601 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F +D I + V+ E+ Sbjct: 602 KPAHMPDTSKFDLADSWIFDRLNHVVGEV 630 Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 29/170 (17%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ I D L RF R+ G D L+ G D G IA A+ Sbjct: 50 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAG--IATQAKVEAR 107 Query: 68 TTKVFVDQNS----------------------RNFRDMADVLDISYDDFIRTTEKRHHDT 105 + +D++ + M LD S + F T +K Sbjct: 108 LREQGIDRHQLGREKFLKQVWEWKDEYANIIKGQWAKMGLSLDYSRERF--TLDKGLSKA 165 Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 R ++ ++ ++G IY+G Y + + E +D EV +K G +Y+ ++ Sbjct: 166 VRKVFVQLYNEGLIYRGEYIINWDPKLETALSDIEVIHKDDKGDFYHIKY 215 >gi|255554032|ref|XP_002518056.1| methionine-tRNA synthetase, putative [Ricinus communis] gi|223542652|gb|EEF44189.1| methionine-tRNA synthetase, putative [Ricinus communis] Length = 678 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 1/111 (0%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV AR+ RL G + ++ GTDE+G A Sbjct: 24 KRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETKA 83 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113 + K D+ R++ +IS+D+F RT+ + + C+ ++KK+ Sbjct: 84 MEENCSPKEICDKYHAIHREVYKWFNISFDEFGRTSTPQQTEVCQAIFKKL 134 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 54/219 (24%), Positives = 103/219 (47%), Gaps = 9/219 (4%) Query: 273 IYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFL 329 + +P+ LL N L K + ++ ++ K SKS G V + V+ RY+L Sbjct: 200 VMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGIGVFGNDAKDTNIPVEVWRYYL 259 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP-TPGAFT 384 + D + L+ ++N +L N +GN ++R +S I K Y ++P P A + Sbjct: 260 LTNRPEVSDTLFTWSDLQAKLNNELLNNLGNFINRVLSFIAKPPGTGYGSIVPDAPNADS 319 Query: 385 ESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443 L+ ++L + E M+ + + L +S+ SE + Y + W+L K + Sbjct: 320 HPRTKKLAEDVGKLLGQYVEAMEKVKLKQGLKTAMSISSEGNAYLQECQFWKLYKEDQPS 379 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + V+ +V ++ LA LL+ F+P + ++F L ++ E Sbjct: 380 CNIVMRASVGLVYLLACLLEPFMPSFSLEVFKQLNLSPE 418 >gi|329768992|ref|ZP_08260415.1| valyl-tRNA synthetase [Gemella sanguinis M325] gi|328835799|gb|EGF85522.1| valyl-tRNA synthetase [Gemella sanguinis M325] Length = 879 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 14/181 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W A ++ L Sbjct: 446 VLDTWYSSALFPFSTLGWPDLESEDFKRYYPNSCLVTGYDIIFF----WVARMVFQGLEF 501 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + HG + +G K+SKSLGN +DP+EVIEE G D+LRYFL G+D Sbjct: 502 TGVRPFEDCLIHGLVRDEQGRKMSKSLGNGVDPMEVIEEYGADSLRYFLATNSTPGQDLR 561 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N SR V M L+ ++ I G T +D+ IL+ ++ ++ Sbjct: 562 YSTEKIEASWN--YINKIWN-ASRFVIMNLEGFEYSDIDLSGEKTLADKYILTKLAKTIE 618 Query: 400 E 400 + Sbjct: 619 D 619 Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + HIGHA++ + D+L R+ RL G DVL+ G D +AG+ Sbjct: 39 TIVIPPPNVTGKLHIGHAWDTTLQDMLTRYKRLKGFDVLYLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSR 78 +T+ V+ R Sbjct: 88 STQAKVEAKMR 98 >gi|282850252|ref|ZP_06259631.1| leucine--tRNA ligase [Veillonella parvula ATCC 17745] gi|282579745|gb|EFB85149.1| leucine--tRNA ligase [Veillonella parvula ATCC 17745] Length = 822 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 8/180 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + +EK Y+ YP+ H+GH I DV+ARF ++ G +VL G D G A Sbjct: 30 ESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMKGFNVLHPMGWDSFGMPAENA 89 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119 A G+ K + N N + L +SY D + T ++ ++ + +++ KG Sbjct: 90 AIKHGIAPKTWTLDNIENMKLQQKALGLSYDWDREVATCKEDYYKWTQWFFEQFYKKGLA 149 Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 YK W N+ + DG + NPV+ + +F R++ Y D+LL+ Sbjct: 150 YKKEAKVNWCETCHTVLANEQVI----DGACWRCD-NPVEKKDLSQWFLRITEYADRLLA 204 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 L+ AN P + + + G +L +G K+SKS GNV+ P E+I G D R F++ +D Sbjct: 560 LIDANEPF-RGLLTQGMVLKEGSKMSKSKGNVVSPEEIINTYGADTARLFILFAAPVDRD 618 Query: 339 GFYDKDGLK 347 + G++ Sbjct: 619 LDWSDQGVE 627 >gi|256960312|ref|ZP_05564483.1| valyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|293388509|ref|ZP_06633013.1| valine--tRNA ligase [Enterococcus faecalis S613] gi|312905725|ref|ZP_07764747.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|312909080|ref|ZP_07767940.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|256950808|gb|EEU67440.1| valyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|291082113|gb|EFE19076.1| valine--tRNA ligase [Enterococcus faecalis S613] gi|310628204|gb|EFQ11487.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|311290642|gb|EFQ69198.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] Length = 880 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 45/345 (13%) Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F ++ +K + E+ EF P R N+ + D +SR+ + WG +IP Sbjct: 363 WFVKMGPLAEKAIENQETEDAVEFYPP--RFNQTFLRWMENIHDWVISRQLW-WGHQIPA 419 Query: 222 -------------DDP---------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 ++P ++ W + +T G+ D +++P Sbjct: 420 WYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTS 479 Query: 260 LHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316 V G DI+ F + + + + P + V HG I +G K+SKSLGN IDP++V Sbjct: 480 TLVTGYDIIAFWVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDV 538 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 IE+ G DALR+FL A G+D + + + N N I N SR V M + +GM Sbjct: 539 IEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGM 592 Query: 377 ----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G T +D IL+ + + + E A Q+ + + + D Y + Sbjct: 593 TAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEM 652 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 K L N T + V + Q+ LL +P + +I++ Sbjct: 653 SKE-ILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|222479318|ref|YP_002565555.1| isoleucyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239] gi|222452220|gb|ACM56485.1| isoleucyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239] Length = 1050 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 113/266 (42%), Gaps = 26/266 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL--SANL 284 + VW+D+ T GY + + + + WPAD V D R +W + +A Sbjct: 527 VFDVWLDSSVASWGTLGYPSD-ETAHDELWPADFIVEAHDQTR--GWFWSQLGMGTAAVG 583 Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 +P ++V HGF G K+SKS+GN++ P E IE G D LR +L+ G D ++ Sbjct: 584 EIPYEEVLMHGFANDENGRKMSKSVGNIVTPEEAIERAGRDPLRTYLLSHDQQGVDLAFE 643 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILK--DYDGMIPTP-----GAFTESDESILSVCS 395 DGL + G N++ L+ D DG P G DE +LS Sbjct: 644 WDGLGE------LQGKLNILWNVFRFPLEYMDLDGYDPAEADLDDGELELVDEWVLSRLQ 697 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDA---QKPWELKKTNPDRASTVLYVT 451 V E+ E + + A+ VI V++ V R++ + WE + R + T Sbjct: 698 SVETEVTEAWADYRVSDAVNAVIEFVTQDVSRFYVKAVRDRMWEEADSASKRGAYATLAT 757 Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477 + + LL P + +++ L Sbjct: 758 --ALDETTRLLAPIAPYMTERMYQTL 781 >gi|223984583|ref|ZP_03634710.1| hypothetical protein HOLDEFILI_02006 [Holdemania filiformis DSM 12042] gi|223963430|gb|EEF67815.1| hypothetical protein HOLDEFILI_02006 [Holdemania filiformis DSM 12042] Length = 889 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 88/365 (24%), Positives = 156/365 (42%), Gaps = 43/365 (11%) Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE---FILPIERRNEVISFVKSGLKDLSLSRKT 213 V+ M + +F R+ + +L + E E F P R + + ++D +SR+ Sbjct: 371 VEPMLSKQWFVRMKPLAEDVLKHQELAEEKINFYPP--RFEKTFTQWLENIEDWCISRQL 428 Query: 214 FDWGIKIP--------------DDPQY---------IMYVWIDALTNYLTTTGYLD-NPD 249 + WG +IP + PQ ++ W + +T G+ D PD Sbjct: 429 W-WGHRIPAWYHKETGEIYVGTEAPQDLENWNQDEDVLDTWFSSALWPFSTLGWPDKTPD 487 Query: 250 GSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKS 306 + ++P D+ V G DI+ F + + A + + P K V HG I +G K+SKS Sbjct: 488 LER--YYPNDVLVTGYDIIFFWVARMAFQARYFTKSRPF-KDVLIHGLIRDAQGRKMSKS 544 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 LGN +DP++VI + GVD+LR+FL G+D Y ++ L+ N N I N SR V Sbjct: 545 LGNGVDPMDVIAKHGVDSLRFFLTTNSTPGQDMRYIEEKLEASWN--FINKIWN-ASRFV 601 Query: 367 SMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423 M + +D+ + +D IL+ + + + NM ++ S + + Sbjct: 602 MMNMPEDFTLEDIDLSTLSITDTWILNRLNETIASVTANMDKYEFALVGNELYSFIWDDF 661 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 Y + K L + + +R + LL F+P + +I+ +L ++ Sbjct: 662 CSWYIELSKA-GLNSEDAQVKRATQSTLIVCLRAIIRLLHPFMPFVTEEIYSVLPHTEKA 720 Query: 484 RCFQS 488 C + Sbjct: 721 CCLAA 725 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 22/133 (16%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 H+GHA++ + D++AR+ R+ G D+L+ G D +AG+ T+ VD+ + Sbjct: 71 HLGHAWDTTLQDIIARYKRMQGYDMLWVPGMD-----------HAGIATQAKVDERLK-- 117 Query: 81 RDMADVLDISYDDFIRTT---EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEA--- 134 ++ D+ + F+ ++ + R W K+ D + ++ L Sbjct: 118 KEGVSRYDLGREKFLERAWDWKEEYAGHIRQQWAKMGLSLDYTRERFTLDEGLSKAVAKV 177 Query: 135 ---YYNDDEVYKG 144 YYND +Y+G Sbjct: 178 FVDYYNDGLIYQG 190 >gi|77462536|ref|YP_352040.1| valyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1] gi|90108434|sp|Q3J4Z5|SYV_RHOS4 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|77386954|gb|ABA78139.1| Putative valyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1] Length = 987 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 30/167 (17%) Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY-VWIDA------LTNYL 239 ++ + R E I + L D +L+ +DP +++Y VW D ++ L Sbjct: 519 VVEVASRAEAIDRLAQALADYNLN-----------EDPTHLVYPVWRDPDVLDTWFSSGL 567 Query: 240 TTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFS 292 G L P+ + A+++P ++ + G DI+ +W A ++ L + K V+ Sbjct: 568 WPIGTLGWPEETPELARYFPTNVLITGFDII----FFWVARMMMMQLAVVNEVPFKTVYV 623 Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 H + KG+K+SKSLGNV+DP+E+I+E G DA+R+ L A G+D Sbjct: 624 HALVRDEKGKKMSKSLGNVLDPLELIDEFGADAVRFTLTAMAAMGRD 670 Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75 H+GHA+ + D+L R+HR+ G D L+ G D +AG+ T++ V++ Sbjct: 52 HMGHAFNNTLQDILTRWHRMRGFDTLWQPGQD-----------HAGIATQMVVER 95 >gi|18977468|ref|NP_578825.1| isoleucyl-tRNA synthetase [Pyrococcus furiosus DSM 3638] gi|18266873|sp|P46214|SYI_PYRFU RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|18893167|gb|AAL81220.1| isoleucyl-tRNA synthetase [Pyrococcus furiosus DSM 3638] Length = 1066 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 128/254 (50%), Gaps = 14/254 (5%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD-ILRFHAIYWPAFLLSANLPLPK 288 VW D+ + GY N + + K WPAD V G+D + ++ A +++ + + Sbjct: 552 VWFDSGIASWASLGYPRNKELFE-KLWPADFIVEGEDQVTKWFYSQQAASVIAFDTVPYR 610 Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 V HG++L KG+K+SKSLGN+I P EV+E+ G D R++++ ++ + G++ Sbjct: 611 AVAMHGYVLDEKGDKMSKSLGNIIRPEEVVEKAGRDTFRFYMLWATNPWENLKFSWKGVE 670 Query: 348 KRVNADLANGIGNLVSRSVS-MILKDYD--GMIPTPGAFTESDESILSVCSRVLQEIREN 404 + + N + N+ S + M L ++D + F E D+ ILS + +++E+ Sbjct: 671 Q--VRRMLNILWNVYVLSATYMSLDNFDPRNVKVEELEFREEDKWILSRVNNLIKEVENG 728 Query: 405 MQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460 ++ + +A + + V E + R++ ++ W ++ +PD+ + Y +V L Sbjct: 729 IETFYLTKATRALYNFVVEDLSRWYVRLIRKRLW-VEGDDPDKLAA-YYTLWKVFDVLLR 786 Query: 461 LLQAFVPKLANKIF 474 L+ F P + +I+ Sbjct: 787 LMAPFTPYITEEIY 800 Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 13/105 (12%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQN 64 K Y Y + H+G A+ II D++ RF + G +V G D HG I K Q Sbjct: 41 KYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVWRQPGYDMHGLPIEVKVEQA 100 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109 G+ TK +++ I ++FI+ ++ + RI+ Sbjct: 101 LGLKTKKEIEEK------------IGVENFIQKCKEFALNNLRIM 133 >gi|293382180|ref|ZP_06628123.1| valine--tRNA ligase [Enterococcus faecalis R712] gi|291080463|gb|EFE17827.1| valine--tRNA ligase [Enterococcus faecalis R712] Length = 880 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 45/345 (13%) Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F ++ +K + E+ EF P R N+ + D +SR+ + WG +IP Sbjct: 363 WFVKMGPLAEKAIENQETEDAVEFYPP--RFNQTFLRWMENIHDWVISRQLW-WGHQIPA 419 Query: 222 -------------DDP---------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 ++P ++ W + +T G+ D +++P Sbjct: 420 WYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTS 479 Query: 260 LHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316 V G DI+ F + + + + P + V HG I +G K+SKSLGN IDP++V Sbjct: 480 TLVTGYDIIAFWVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDV 538 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 IE+ G DALR+FL A G+D + + + N N I N SR V M + +GM Sbjct: 539 IEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGM 592 Query: 377 ----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G T +D IL+ + + + E A Q+ + + + D Y + Sbjct: 593 TAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEM 652 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 K L N T + V + Q+ LL +P + +I++ Sbjct: 653 SKE-ILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDSSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|282896678|ref|ZP_06304686.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Raphidiopsis brookii D9] gi|281198396|gb|EFA73284.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Raphidiopsis brookii D9] Length = 1045 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 87/379 (22%), Positives = 156/379 (41%), Gaps = 65/379 (17%) Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYY--ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 PV+ + +F ++ DK L + E+ PEF+ +R +V L+D +SR+ Sbjct: 370 PVEPLLSTQWFVKIRPLADKTLEFLDQENSPEFV--PQRWGKVYRDWLVNLRDWCISRQL 427 Query: 214 FDWGIKIP--------------DDPQYIMYVWIDALTNYLTTTG----YLDNPD------ 249 + WG +IP P ++ + +AL + G + +PD Sbjct: 428 W-WGHQIPAWYAVSETGGEITDSTPYFVAHNETEALEKARSQWGENVQLIQDPDVLDTWF 486 Query: 250 ----------GSKAK------FWPADLHVIGKDILRFHAIYWPAFL------LSANLPLP 287 G K ++P V G DI+ F W A + + +P Sbjct: 487 SSGLWPFSTLGWPEKTPDFDAYYPTTTLVTGFDIIFF----WVARMTMMAGHFTGKMPF- 541 Query: 288 KKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDG 345 + V+ HG + + +K+SKS N IDP+ +I++ G DALRY LV+E + G+D + D Sbjct: 542 QTVYIHGLVRDENKQKMSKSANNGIDPLLLIDKYGTDALRYTLVKEVVGAGQDIRLEYDR 601 Query: 346 LK-KRVNADLANGIGNLVSRSVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQE 400 K + V+ + + N + + ++ + DG P P SD ILS +V+++ Sbjct: 602 KKDESVSVEASRNFANKLWNAARFVMMNLDGQTPEQLGEPQGIELSDRWILSRYHQVVKQ 661 Query: 401 IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 + N + A + + D Y + K +P T + ++ + Sbjct: 662 TNNYIDNYGLGEAAKGLYEFIWGDFCDWYIELVKSRLQNNADPVSRKTAQQILASILSGV 721 Query: 459 AILLQAFVPKLANKIFDIL 477 LL F+P + +I+ L Sbjct: 722 LKLLHPFMPHITEEIWQTL 740 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 15/32 (46%), Positives = 22/32 (68%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 H+GHA+E + D L R+HR+ G + L+ GTD Sbjct: 71 HMGHAFESALIDALVRYHRMKGRNTLWLPGTD 102 >gi|295114302|emb|CBL32939.1| valyl-tRNA synthetase [Enterococcus sp. 7L76] Length = 880 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P V G DI+ F Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIFF 490 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P + V HG I +G K+SKSLGN IDP++VIE+ G DALR+ Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL A G+D + + + N N I N SR V M + +GM I G Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIEFSGEK 603 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 T +D IL+ + + + E A Q+ + + + D Y + K L N Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGDNE 662 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 T + V + Q+ LL +P + +I++ Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|228475237|ref|ZP_04059963.1| valine--tRNA ligase [Staphylococcus hominis SK119] gi|228270848|gb|EEK12250.1| valine--tRNA ligase [Staphylococcus hominis SK119] Length = 876 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 18/261 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P ++ V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPNEEAKDYQRYYPTNVLVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K V HG + G K+SKSLGN +DP++VIE+ G D+LRYFL + G D Sbjct: 499 TGKRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIEKYGADSLRYFLATGSSPGNDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + ++ Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIE 616 Query: 400 EI---RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 + E + + RAL I D Y + K + + + T V + Sbjct: 617 TVTNLSEKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNGEDEAQKQTTRSVLSYTLD 674 Query: 457 QLAILLQAFVPKLANKIFDIL 477 Q+ +L F+P + KI+ L Sbjct: 675 QIMRMLHPFMPFVTEKIWQSL 695 Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 13/67 (19%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 38 TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMD-----------HAGI 86 Query: 68 TTKVFVD 74 T+ VD Sbjct: 87 ATQAKVD 93 >gi|221135841|ref|XP_002164854.1| PREDICTED: similar to methionyl-tRNA synthetase, partial [Hydra magnipapillata] Length = 243 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 9/118 (7%) Query: 5 EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +K ++ A+ Y N HIGH A I AD+ R+ R G DV F +GTDEHG I A+ Sbjct: 6 QKYTVTAALIYANGPIHIGHLAGCYIPADIYVRYLRSKGADVAFISGTDEHGVPITVKAR 65 Query: 64 NAGVTTKVFVD----QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117 G T + VD Q ++F D IS+D + RT+ + HH + ++ + DKG Sbjct: 66 KEGKTPQQVVDFYYEQIKQSFADFG----ISFDIYSRTSNQSHHKVSQEIFTTLYDKG 119 >gi|255974415|ref|ZP_05425001.1| valyl-tRNA synthetase [Enterococcus faecalis T2] gi|307281862|ref|ZP_07562078.1| valyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|255967287|gb|EET97909.1| valyl-tRNA synthetase [Enterococcus faecalis T2] gi|306503893|gb|EFM73114.1| valyl-tRNA synthetase [Enterococcus faecalis TX0860] Length = 880 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P V G DI+ F Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIFF 490 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P + V HG I +G K+SKSLGN IDP++VIE+ G DALR+ Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL A G+D + + + N N I N SR V M + +GM I G Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 T +D IL+ + + + E A Q+ + + + D Y + K L N Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGENE 662 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 T + V + Q+ LL +P + +I++ Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|196229356|ref|ZP_03128221.1| valyl-tRNA synthetase [Chthoniobacter flavus Ellin428] gi|196226588|gb|EDY21093.1| valyl-tRNA synthetase [Chthoniobacter flavus Ellin428] Length = 893 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 78/316 (24%), Positives = 134/316 (42%), Gaps = 40/316 (12%) Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------DDPQY--------IMYV 230 ER +V G++D +SR+ + WG +IP P+ ++ Sbjct: 397 ERWAKVYDHWLEGIQDWCISRQLW-WGHRIPVWYRGDEIHCDITAPEGDGWKQDSDVLDT 455 Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA------NL 284 W + T G+ + D + AKF+P V G DI+ +W A ++ A +L Sbjct: 456 WFSSWLWPFATMGWPEKTD-TLAKFYPTTDLVTGPDII----FFWVARMIMAGYEWMGDL 510 Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K V+ G I K G K+SKSLGN DP+++I + G DALR+ ++R G D +D+ Sbjct: 511 PF-KNVYFTGIIRDKQGRKMSKSLGNSPDPLDLIAKYGADALRFGVMRSAPLGADILFDE 569 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 ++ + + + N +R M +G I P T D IL+ S + ++ Sbjct: 570 KNVE--LGRNFCTKLWN-ATRFRQMQGGASEGEI-RPDLLTSDDRWILARLSDAIGDVST 625 Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461 ++ A + + D Y +A K + R + L V V+ + Sbjct: 626 SLDEYRFSDATSTLYRFFWNEFCDWYLEACKAVFFHSGDEARKANTLAVIDFVLAHTLRI 685 Query: 462 LQAFVPKLANKIFDIL 477 F+P + +I++ L Sbjct: 686 FHPFLPFITEEIWNSL 701 >gi|197294279|ref|YP_001798820.1| valyl-tRNA synthetase [Candidatus Phytoplasma australiense] gi|171853606|emb|CAM11477.1| Valyl-tRNA synthetase [Candidatus Phytoplasma australiense] Length = 856 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 7/129 (5%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF---HAIYWPAFLLSAN 283 ++ W + L+T G+ + +F PAD+ V G DIL F + +FL + Sbjct: 438 VLDTWFSSSLWPLSTLGWPNKKSFFNKRF-PADVLVTGYDILTFWVSKMVLQSSFLTQKD 496 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 P K V HG I ++G+K+SKS GN +DP+++I + GVDALR+FL+ A G D YD Sbjct: 497 -PF-KDVLLHGLIRDNEGQKMSKSKGNGVDPLDIINKYGVDALRFFLITSAAPGLDLLYD 554 Query: 343 KDGLKKRVN 351 + +K N Sbjct: 555 EIKVKNAWN 563 Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 + I PN + H+GHA+ +I D+L RF ++ G +VLF G D G Sbjct: 36 TVVIPPPNVTGKLHLGHAWNNVIQDILIRFKKMQGFEVLFLPGMDHAG 83 >gi|219856195|ref|YP_002473317.1| hypothetical protein CKR_2852 [Clostridium kluyveri NBRC 12016] gi|219569919|dbj|BAH07903.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 898 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 17/188 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ +N + K F+P + V G DI+ F W A ++ + L Sbjct: 467 VLDTWFSSALWPFSTLGWPENTEDLKC-FYPNNTLVTGYDIIFF----WVARMIFSGLYC 521 Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +P + V HG + +G K+SKSLGN +DPIEVI E G DALR+ L+ A G D Sbjct: 522 MDDIPFENVLIHGIVRDSEGRKMSKSLGNGVDPIEVIGEYGADALRFALITGNAPGNDIR 581 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVL 398 Y + ++ N AN I N SR V M L D + M ++++D+ ILS + + Sbjct: 582 YYPERVESARN--FANKIWN-ASRFVLMNL-DENIMDKYKACREYSDADKWILSRLNTLA 637 Query: 399 QEIRENMQ 406 +E+ +N++ Sbjct: 638 KEVTDNIE 645 >gi|189083231|sp|Q12R39|SYL_SHEDO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS Length = 863 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 17/242 (7%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + +EK Y + YP+ + H+GH I DV+AR+ RL G +VL G D G A Sbjct: 30 ESKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENA 89 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A N + + +N ++ +L YD I T ++ + + K+ +KG + Sbjct: 90 AINNKTSPAPWTYENIDYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGMV 149 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178 YK S + DE +++V DG + PV E +F +++ Y ++LL+ Sbjct: 150 YKKTSSVNWCPNDETVLANEQV---QDGCCWRCD-TPVIQKEIPQWFIKITDYAEELLND 205 Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 + PE + ++R R+E I +KD S ++FD PD + YV I Sbjct: 206 IDTLDGWPEQVKAMQRNWIGRSEGIEMTFK-VKD---SEQSFDIYTTRPDTLMGVTYVAI 261 Query: 233 DA 234 A Sbjct: 262 AA 263 >gi|117923746|ref|YP_864363.1| leucyl-tRNA synthetase [Magnetococcus sp. MC-1] gi|171460773|sp|A0L4R4|SYL_MAGSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|117607502|gb|ABK42957.1| leucyl-tRNA synthetase [Magnetococcus sp. MC-1] Length = 859 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 10/181 (5%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 + ++E Y+ YP+ + H+GH I DV+AR+ R+ G VL G D G Sbjct: 30 LGDKETFYLLVMFPYPSGRIHMGHVRNYAIGDVIARYQRMQGKAVLHPMGWDAFGMPAEN 89 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKG 117 AA V + + +N R+ + +SYD +F E H ++L+ ++ +KG Sbjct: 90 AAAQRKVHPRDWTYENIATMREELKSMGLSYDWDREFATCDEDYAHAE-QVLFLRLYEKG 148 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 +Y K + W + D +++V G G A PV+ E +FFR++ Y D+L Sbjct: 149 LVYRKHAFVNWDPV-DHTVLANEQVIDGC-GWRSGA---PVEQRELNQWFFRITHYADEL 203 Query: 177 L 177 L Sbjct: 204 L 204 >gi|169350153|ref|ZP_02867091.1| hypothetical protein CLOSPI_00895 [Clostridium spiroforme DSM 1552] gi|169292936|gb|EDS75069.1| hypothetical protein CLOSPI_00895 [Clostridium spiroforme DSM 1552] Length = 878 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 35/280 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P + V G DI+ F W + ++ +L Sbjct: 449 VLDTWFSSALWPFSTLGWPNEDSELFKRYFPTNTLVTGYDIIFF----WVSRMIFQSLHF 504 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN +DP++VI+E G D LR+FL A G D Sbjct: 505 TDQRPFENVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDEYGADTLRFFLTTNSAPGMDLR 564 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP----TPGAFTESDESILSVCSR 396 Y + L+ N N I N S +L + D + T D+ IL+ + Sbjct: 565 YIPEKLESSWN--FINKIWN----SARFVLMNIDESMKYEDLTFDNLNLCDKWILNRLNE 618 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRY-FDAQKPW--ELKKTNPDRASTV-----L 448 V++E+ NM + +++ +E+ ++ +D W EL K + + + V L Sbjct: 619 VIREVDINMDK-------FEFVNVGTELYKFIWDDFCSWYIELTKVHLNSENEVEKQASL 671 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488 V V+ + +L F+P + +IF + +E+ C S Sbjct: 672 NTLVYVLNAIVKMLHPFMPFVTEEIFQAIPHLEESICIAS 711 Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 6/65 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R+ R+ G D L+ G D G K+ Q Sbjct: 44 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRYKRMQGYDALWLPGMDHAGIATQAKVEARMQ 103 Query: 64 NAGVT 68 GV+ Sbjct: 104 EEGVS 108 >gi|116878593|ref|YP_357724.2| valyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] gi|114843229|gb|ABA89554.2| valyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] Length = 885 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 85/314 (27%), Positives = 135/314 (42%), Gaps = 52/314 (16%) Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDAL 235 ++D +SR+ + WG +IP +DP ++ W + Sbjct: 399 IRDWCISRQIW-WGHRIPAWFCAACNEVTVSREDPTACSHCGATELRQETDVLDTWFSSA 457 Query: 236 TNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-K 288 +T G+ PD + A KF+P V G DIL F W A ++ L +P K Sbjct: 458 LWPFSTMGW---PDKTVALEKFYPTSCLVTGFDILFF----WVARMMMMGLKFMGQVPFK 510 Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 V+ H + +G+K+SKS GNVIDP+ VI+E G DA R+ L A G+D D + Sbjct: 511 DVYIHALVRDAQGQKMSKSKGNVIDPLTVIDEYGTDAFRFTLAAFAAQGRDVKLSVDRIA 570 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQEIRENM 405 N N + N SR M L+D+D G+ T ++ IL+ V E + + Sbjct: 571 GYRN--FVNKLWN-ASRFALMNLEDFDPSGIDLDDCQLTLAERWILTRLIDVAAETGKAL 627 Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463 + + A + + + D Y + K +L + R +T V V+ QL LL Sbjct: 628 EEYKFNEAASVLYAFTWHEFCDWYIELSKD-DLYGEDAARKATSQAVLYTVLEQLLRLLH 686 Query: 464 AFVPKLANKIFDIL 477 +P + +I+ L Sbjct: 687 PLMPFVTEEIWQAL 700 Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 7/72 (9%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA + D+LAR+ R+DG +VL+ GTD G A QN V Sbjct: 40 SIVIPPPNVTGVLHMGHALNNTLQDILARWKRMDGHEVLWQPGTDHAG----IATQNV-V 94 Query: 68 TTKVFVDQNSRN 79 ++ + +SR+ Sbjct: 95 EKQLAAEGSSRH 106 >gi|153955828|ref|YP_001396593.1| valyl-tRNA synthetase [Clostridium kluyveri DSM 555] gi|146348686|gb|EDK35222.1| ValS [Clostridium kluyveri DSM 555] Length = 882 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 17/188 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ +N + K F+P + V G DI+ F W A ++ + L Sbjct: 451 VLDTWFSSALWPFSTLGWPENTEDLKC-FYPNNTLVTGYDIIFF----WVARMIFSGLYC 505 Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +P + V HG + +G K+SKSLGN +DPIEVI E G DALR+ L+ A G D Sbjct: 506 MDDIPFENVLIHGIVRDSEGRKMSKSLGNGVDPIEVIGEYGADALRFALITGNAPGNDIR 565 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVL 398 Y + ++ N AN I N SR V M L D + M ++++D+ ILS + + Sbjct: 566 YYPERVESARN--FANKIWN-ASRFVLMNL-DENIMDKYKACREYSDADKWILSRLNTLA 621 Query: 399 QEIRENMQ 406 +E+ +N++ Sbjct: 622 KEVTDNIE 629 >gi|19705307|ref|NP_602802.1| valyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|81485170|sp|Q8RHK3|SYV_FUSNN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|19713276|gb|AAL94101.1| Valyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 887 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 22/261 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ P+ +K F+P + V G DI+ F F + Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELDLFYPTNTLVTGADIIFFWVARMIMFGMYELK 508 Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 +P K VF HG + + G K+SKSLGN DP+++I+E GVDA+R+ ++ + G+D + Sbjct: 509 KIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQGQDVHFS 568 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400 D L + + AN I N +R V M LK +D + T + D+ I+S + ++ Sbjct: 569 TDLLG--MGRNFANKIWN-ATRFVIMNLKGFDVKSVDKTKLDYELVDKWIISRLNETAKD 625 Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS-----TVLYVTVE 453 +++ ++ + A V + D Y + K ++ N D T Y+ Sbjct: 626 VKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAK---IRLYNDDEDKKISKLTAQYMLWT 682 Query: 454 VIRQLAILLQAFVPKLANKIF 474 ++ Q LL F+P + +I+ Sbjct: 683 ILEQGLRLLHPFMPFITEEIW 703 >gi|197121883|ref|YP_002133834.1| valyl-tRNA synthetase [Anaeromyxobacter sp. K] gi|196171732|gb|ACG72705.1| valyl-tRNA synthetase [Anaeromyxobacter sp. K] Length = 1051 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 19/261 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + + + F+P + G DI+ +W A ++ L Sbjct: 462 VLDTWFSSGLWPFSTMGWPEQTETLRT-FYPTSVMETGHDII----FFWVARMMMMGLHF 516 Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +V LH KG+K+SK+ GNVIDP+ + ++ G DALR+ L A G+D Sbjct: 517 MGEVPFRTVYLHPMVRDEKGQKMSKTKGNVIDPLVITDQYGADALRFTLAALTAQGRDIK 576 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVL 398 K+ ++ AN + N SR M L Y G P A T +D IL+ R + Sbjct: 577 LAKERIEG--YRAFANKLWN-ASRFALMNLSGYQERGEDPARLARTPADRWILARLQRAV 633 Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 E E ++ + A V + V D Y + K L +P+ +V V V ++ Sbjct: 634 NETVEALEAFRFNDAANAVYAFVWHELCDWYIELSKE-ALASEDPEARRSVQAVLVHCLQ 692 Query: 457 QLAILLQAFVPKLANKIFDIL 477 LL F+P + +++ +L Sbjct: 693 TSYRLLHPFMPFITEELWHVL 713 Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 13/76 (17%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +R + S + PN H+GHA + DVL R+ R+ G + L+ GTD Sbjct: 44 DRTRPPFSIVLPPPNVTGSLHLGHALTATLQDVLIRWKRMSGFNTLWLPGTD-------- 95 Query: 61 AAQNAGVTTKVFVDQN 76 +AG+ T++ V++ Sbjct: 96 ---HAGIATQMIVEKE 108 >gi|91792159|ref|YP_561810.1| leucyl-tRNA synthetase [Shewanella denitrificans OS217] gi|91714161|gb|ABE54087.1| leucyl-tRNA synthetase [Shewanella denitrificans OS217] Length = 872 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 17/242 (7%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + +EK Y + YP+ + H+GH I DV+AR+ RL G +VL G D G A Sbjct: 39 ESKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENA 98 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A N + + +N ++ +L YD I T ++ + + K+ +KG + Sbjct: 99 AINNKTSPAPWTYENIDYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGMV 158 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178 YK S + DE +++V DG + PV E +F +++ Y ++LL+ Sbjct: 159 YKKTSSVNWCPNDETVLANEQV---QDGCCWRCD-TPVIQKEIPQWFIKITDYAEELLND 214 Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 + PE + ++R R+E I +KD S ++FD PD + YV I Sbjct: 215 IDTLDGWPEQVKAMQRNWIGRSEGIEMTFK-VKD---SEQSFDIYTTRPDTLMGVTYVAI 270 Query: 233 DA 234 A Sbjct: 271 AA 272 >gi|256761215|ref|ZP_05501795.1| valyl-tRNA synthetase [Enterococcus faecalis T3] gi|256682466|gb|EEU22161.1| valyl-tRNA synthetase [Enterococcus faecalis T3] Length = 880 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P V G DI+ F Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIFF 490 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P + V HG I +G K+SKSLGN IDP++VIE+ G DALR+ Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL A G+D + + + N N I N SR V M + +GM I G Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAAYIDFSGEK 603 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 T +D IL+ + + + E A Q+ + + + D Y + K L N Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGDNE 662 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 T + V + Q+ LL +P + +I++ Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|260890419|ref|ZP_05901682.1| valine--tRNA ligase [Leptotrichia hofstadii F0254] gi|260860039|gb|EEX74539.1| valine--tRNA ligase [Leptotrichia hofstadii F0254] Length = 881 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 77/294 (26%), Positives = 136/294 (46%), Gaps = 20/294 (6%) Query: 199 FVKSGLKDLSL-SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257 FV L++ + +R+ F + + ++ ++ W + +T G+ + + K KF+P Sbjct: 425 FVAKSLEEAKIQAREKFGKDVNLTEETD-VLDTWFSSALWPFSTLGWPNETEDLK-KFFP 482 Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVI 311 + V G DIL F W A ++ +L + + V+ HG I KG K+SKSLGN Sbjct: 483 TNALVTGADILFF----WVARMVMMSLYIKDEIPFNYVYLHGIIRDEKGRKMSKSLGNSP 538 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 DP+++I + G DA+R+ + + G+D + + L+ + + AN + N SR V L+ Sbjct: 539 DPLDLIAKYGADAIRFSFLYNTSQGQDIHFSEKLLE--MGSAFANKVWN-ASRFVLSNLE 595 Query: 372 DYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRA--LAQVISLVSEVDRYF 428 D+D + F D+ ILS + I ENM+ + A LA D Y Sbjct: 596 DFDVSTTVDNSEFKLEDKWILSKLQTASKLINENMEKYELDAAAKLAYEFFRGDFCDWYV 655 Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + K + D+ +V V+ + +L F+P + +I+ L +E Sbjct: 656 EIAKTRVYGQEGSDKV-VAQWVLRHVLDKGLKMLHPFMPFITEEIWQKLQTGEE 708 Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust. Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 26/182 (14%) Query: 5 EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58 EK S AI PN H+GH I D + R+ R+ G D L+ G D G K+ Sbjct: 35 EKPGYSIAIPPPNVTGILHMGHMLNNSIQDTIIRYKRMSGFDTLWIPGMDHAGIATQNKV 94 Query: 59 AKAAQNAGVTTKV-----FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRH 102 + + G + + F+ + ++ R + LD + + F T ++ Sbjct: 95 ERMLADEGTSKEEIGYDEFLRRTWEWKEKHGGLITKQLRKLGVSLDWTRERF--TMDEGL 152 Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWME 161 + + ++ K+ + G IY+G Y + D+ DDEV ++ +G+ + ++ PV+ + Sbjct: 153 SEAVKEVFIKLYNDGLIYRGEYIVNWCPHDKTALADDEVNHEDKNGKIWEIRY-PVKDSD 211 Query: 162 EE 163 EE Sbjct: 212 EE 213 >gi|303279394|ref|XP_003058990.1| predicted protein [Micromonas pusilla CCMP1545] gi|226460150|gb|EEH57445.1| predicted protein [Micromonas pusilla CCMP1545] Length = 1065 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 6/137 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D KF+P + G DIL F + ++ ++ L Sbjct: 604 VLDTWFSSGLWPFSTLGWPDEDAADFKKFFPTQVMETGHDILFFWVARMVMMSYGMTNTL 663 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P V+ HG + KG K+SKSLGNV+DP+ VI+E G DALR+ L A G+D + Sbjct: 664 PF-HTVYLHGLVRDEKGRKMSKSLGNVVDPLNVIDEQGCDALRFTLATGTAAGQDLNLNM 722 Query: 344 DGLKKRVNADLANGIGN 360 D L N + N I N Sbjct: 723 DRLAS--NRNFTNKIWN 737 >gi|124485013|ref|YP_001029629.1| isoleucyl-tRNA synthetase [Methanocorpusculum labreanum Z] gi|166229749|sp|A2SPV6|SYI_METLZ RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|124362554|gb|ABN06362.1| Isoleucyl-tRNA synthetase [Methanocorpusculum labreanum Z] Length = 1066 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 76/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276 +IPD I VW D+ T + + P+ K+WPAD + G D R F++ Sbjct: 514 RIPD----IFDVWYDSGIASWATLRFPEKPE-DFGKYWPADFILEGHDQTRGWFYSQLAL 568 Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 + + P K V HGF L +G+K+SKSLGNVI P +V ++ GVD +R +++ A Sbjct: 569 STIAFGKAPY-KSVLMHGFALDAEGKKMSKSLGNVIAPEDVAKQFGVDVMRQYILSANAP 627 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDY-----DGMIPTPGA------- 382 D + +G+K N + N + N+ + M L Y DG + P A Sbjct: 628 WDDMRFSLEGVK--TNHRMFNVLWNVYKFPLPYMALDGYKPAAKDG-VWDPSAVEDHISE 684 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDR-YFDAQKP--W-ELK 437 F D ++S + + +++ + M+ +HRA + + + E+ R Y +P W E + Sbjct: 685 FCREDRWLISRVNSLAEQVTKEMEVCNLHRATRPISTFILDELSRWYVQLVRPRMWLEEE 744 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + +A +Y V+R+L + F P + ++ L Sbjct: 745 SVSKMQAYDTMYY---VMRRLVTIFAPFAPHITECMYQNL 781 >gi|154276782|ref|XP_001539236.1| leucyl-tRNA synthetase, mitochondrial precursor [Ajellomyces capsulatus NAm1] gi|150414309|gb|EDN09674.1| leucyl-tRNA synthetase, mitochondrial precursor [Ajellomyces capsulatus NAm1] Length = 834 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 11/196 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y+ + YP+ H+GH I+DVLARF + G DVL G D G AA Sbjct: 63 KEKAYVLSMFPYPSGALHLGHVRVYTISDVLARFKHMKGYDVLHPMGWDAFGLPAENAAI 122 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 G+ + QN N ++ + +D + + + + + T RI + +G Y Sbjct: 123 ERGIDPAKWTMQNIANMKEQLRAIGARFDWDRELMTCSPEFYKHTQRIF-LMLYKEGLAY 181 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL--- 177 + Y D+ +++V A+G + + V+ +E + +FFR++A+++ LL Sbjct: 182 QAKARVNYDPIDKTVLANEQV--DANGCSWRSGAK-VEKLELKQWFFRITAFKEALLKDL 238 Query: 178 -SYYESHPEFILPIER 192 S S PE +L ++R Sbjct: 239 ESLEASWPERVLSMQR 254 >gi|288931973|ref|YP_003436033.1| isoleucyl-tRNA synthetase [Ferroglobus placidus DSM 10642] gi|288894221|gb|ADC65758.1| isoleucyl-tRNA synthetase [Ferroglobus placidus DSM 10642] Length = 1023 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 21/256 (8%) Query: 230 VWIDALTNYLTTTGYLDNP--DGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285 VW D+ + + G L+ P + K WPAD G D R F++ + + P Sbjct: 514 VWFDS---GVASWGTLEYPLKEEEFKKLWPADFITEGHDQTRGWFYSQLGASIIAFGKAP 570 Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 K V HGF L +G K+SKSLGNV++P EVI+ +GVDA R +++ A +D + Sbjct: 571 Y-KTVLMHGFTLDEQGRKMSKSLGNVVEPEEVIDRIGVDAFRLYVLSS-ALWEDLKFSWG 628 Query: 345 GLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 + + L N N V + + M L + + P D+ ILS + E Sbjct: 629 EAENFLR--LLNIFWNAVRFAYTYMELDKFREVSPEDCELRIEDKWILSRLESFCKLANE 686 Query: 404 NMQNQLIHRALAQVISLVSE-VDRYFDA---QKPWELKKTNPDRASTVLYVTV-EVIRQL 458 M+N +HR + + V E R++ ++ WE +K +P + + Y T+ VI ++ Sbjct: 687 AMENYNLHRVVKRFYDFVVEDFSRWYIQLIRRRVWE-EKDSPSKIAA--YATMFRVIDKV 743 Query: 459 AILLQAFVPKLANKIF 474 ++ F P +A ++ Sbjct: 744 TRIISPFAPFIAEYVY 759 Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 15 YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTKVFV 73 Y + H+G A+ +I D + R+ R+ G V G D HG I K Q G+ K + Sbjct: 45 YTTGRIHLGTAWNKVIKDTVLRYKRMKGFKVTDRPGWDMHGLPIEVKVEQELGIKEKKEI 104 Query: 74 DQ 75 ++ Sbjct: 105 EE 106 >gi|90101539|sp|Q3A253|SYV_PELCD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS Length = 899 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 85/314 (27%), Positives = 135/314 (42%), Gaps = 52/314 (16%) Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDAL 235 ++D +SR+ + WG +IP +DP ++ W + Sbjct: 413 IRDWCISRQIW-WGHRIPAWFCAACNEVTVSREDPTACSHCGATELRQETDVLDTWFSSA 471 Query: 236 TNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-K 288 +T G+ PD + A KF+P V G DIL F W A ++ L +P K Sbjct: 472 LWPFSTMGW---PDKTVALEKFYPTSCLVTGFDILFF----WVARMMMMGLKFMGQVPFK 524 Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 V+ H + +G+K+SKS GNVIDP+ VI+E G DA R+ L A G+D D + Sbjct: 525 DVYIHALVRDAQGQKMSKSKGNVIDPLTVIDEYGTDAFRFTLAAFAAQGRDVKLSVDRIA 584 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQEIRENM 405 N N + N SR M L+D+D G+ T ++ IL+ V E + + Sbjct: 585 GYRN--FVNKLWN-ASRFALMNLEDFDPSGIDLDDCQLTLAERWILTRLIDVAAETGKAL 641 Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463 + + A + + + D Y + K +L + R +T V V+ QL LL Sbjct: 642 EEYKFNEAASVLYAFTWHEFCDWYIELSKD-DLYGEDAARKATSQAVLYTVLEQLLRLLH 700 Query: 464 AFVPKLANKIFDIL 477 +P + +I+ L Sbjct: 701 PLMPFVTEEIWQAL 714 Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 7/72 (9%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA + D+LAR+ R+DG +VL+ GTD G A QN V Sbjct: 54 SIVIPPPNVTGVLHMGHALNNTLQDILARWKRMDGHEVLWQPGTDHAG----IATQNV-V 108 Query: 68 TTKVFVDQNSRN 79 ++ + +SR+ Sbjct: 109 EKQLAAEGSSRH 120 >gi|22299046|ref|NP_682293.1| valyl-tRNA synthetase [Thermosynechococcus elongatus BP-1] gi|81742953|sp|Q8DIS8|SYV_THEEB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|22295228|dbj|BAC09055.1| valyl-tRNA synthetase [Thermosynechococcus elongatus BP-1] Length = 913 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 76/282 (26%), Positives = 121/282 (42%), Gaps = 30/282 (10%) Query: 225 QYIMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILRFHAIYWPAFL---- 279 Q ++ W + +T G+ D+ PD +++P V G DI+ F W A + Sbjct: 463 QDVLDTWFSSGLWPFSTLGWPDDTPD--YRRYYPNTTLVTGFDIIFF----WVARMTMMG 516 Query: 280 --LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IAC 335 + +P + V+ HG + +K+SKS N IDP+ +IE+ G DALRY LV+E + Sbjct: 517 QYFTGKIPF-RDVYIHGLVRDENNKKMSKSANNGIDPLILIEKYGTDALRYSLVKEVVGA 575 Query: 336 GKD---GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP----TPGA--FTES 386 G+D + K V A A N + + +L + +G P TP T S Sbjct: 576 GQDIRLAYNRKTDESATVEA--ARNFANKLWNASRFVLLNLEGQTPGQLGTPRRQDLTAS 633 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA 444 D ILS +Q RE +++ + A + + D Y + KP L+ N Sbjct: 634 DRWILSRYHTAIQTTRERIESYGLGEAAKGLYEFIWGDFCDWYIELVKP-RLQGENAKAK 692 Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 T V V+ LL F+P + +I+ L +N Sbjct: 693 RTAQQVLATVLDGTLKLLHPFMPHITEEIWHTLHQVADNEVL 734 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 17/32 (53%), Positives = 24/32 (75%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 H+GHA+E + DVL R+HR+ G +VL+ GTD Sbjct: 55 HMGHAFEHALIDVLIRYHRMIGRNVLWLPGTD 86 >gi|255308304|ref|ZP_05352475.1| valyl-tRNA synthetase [Clostridium difficile ATCC 43255] Length = 888 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/257 (28%), Positives = 120/257 (46%), Gaps = 21/257 (8%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWP-AFLLSANLPL 286 W + +T G+ P+ ++A ++P + V G DI+ F + A + N Sbjct: 454 TWFSSALWPFSTLGW---PNKTEALDYYYPTSVLVTGYDIIFFWVVRMAFAGMFCMNEKP 510 Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKD 344 V HG + +G K+SKSLGN IDP+E+IE+ G DALR+ L + G D FY + Sbjct: 511 FDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADALRFTLTTGNSPGNDMRFYME- 569 Query: 345 GLKKRVNADLANGIGNLVSRSVSM-----ILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399 + + AN + N SR V M I+K+ T +D+ I+S + +++ Sbjct: 570 --RVEFARNFANKLWN-ASRFVFMNIDEDIIKNMTRE-SVKEDLTLADKWIISRANNIVK 625 Query: 400 EIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 E NM + AL ++ SE D Y + KP L + + S LY V+ + Sbjct: 626 EATNNMDKFDLGIALQKIYDFTWSEYCDWYIEMVKP-RLYGEDANAKSAALYTLTYVLEK 684 Query: 458 LAILLQAFVPKLANKIF 474 + LL ++P + +I+ Sbjct: 685 ILKLLHPYMPFITEEIY 701 >gi|154686944|ref|YP_001422105.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42] gi|154352795|gb|ABS74874.1| ValS [Bacillus amyloliquefaciens FZB42] Length = 880 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/281 (25%), Positives = 125/281 (44%), Gaps = 33/281 (11%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P+D + ++ W + +T G+ D +++ D+ V G DI+ F Sbjct: 432 GLEAPEDSENWEQDSDVLDTWFSSALWPFSTMGWPDENAEDFKRYYSTDVLVTGYDIIFF 491 Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ L K V HG I +G K+SKSLGN +DP++VI++ G D+ Sbjct: 492 ----WVSRMIFQGLEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDKYGADS 547 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380 LRYFL + G+D + + ++ N AN I N + L + DGM + Sbjct: 548 LRYFLATGSSPGQDLRFSYEKVESTWN--FANKIWN----ASRFALMNMDGMTYDELDLS 601 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438 G + +D+ IL+ + ++++ + + + + + D Y + K L Sbjct: 602 GEKSVADKWILTRLNETIEDVTQLADRYEFGEVGRHLYNFIWDDVCDWYIEMAK---LPL 658 Query: 439 TNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D A+ T V V+ Q LL F+P L +I+ L Sbjct: 659 YGEDEAAKKTTRSVLAYVLDQTMRLLHPFMPFLTEEIWQHL 699 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G DVL+ G D G A A V Sbjct: 43 SVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAG-----IATQAKV 97 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ SR F + Y DFIR T ++ + Sbjct: 98 EAKLREQGTSRYDLGREKFLEETWKWKEEYADFIRSQWAKMGLGLDYSRERFTLDEGLNK 157 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 R ++ K+ KG IY+G Y W A + + +YK G +Y+ ++ Sbjct: 158 AVREVFVKLYKKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHLRY 208 >gi|229547604|ref|ZP_04436329.1| valyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|229548188|ref|ZP_04436913.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|256852478|ref|ZP_05557854.1| valyl-tRNA synthetase [Enterococcus faecalis T8] gi|257091151|ref|ZP_05585512.1| valyl-tRNA synthetase [Enterococcus faecalis CH188] gi|312902616|ref|ZP_07761821.1| valyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|229306667|gb|EEN72663.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|229307294|gb|EEN73281.1| valyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|256712332|gb|EEU27364.1| valyl-tRNA synthetase [Enterococcus faecalis T8] gi|256999963|gb|EEU86483.1| valyl-tRNA synthetase [Enterococcus faecalis CH188] gi|310633954|gb|EFQ17237.1| valyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|315030884|gb|EFT42816.1| valyl-tRNA synthetase [Enterococcus faecalis TX4000] gi|315163283|gb|EFU07300.1| valyl-tRNA synthetase [Enterococcus faecalis TX0645] gi|315578975|gb|EFU91166.1| valyl-tRNA synthetase [Enterococcus faecalis TX0630] Length = 880 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P V G DI+ F Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIFF 490 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P + V HG I +G K+SKSLGN IDP++VIE+ G DALR+ Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL A G+D + + + N N I N SR V M + +GM I G Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 T +D IL+ + + + E A Q+ + + + D Y + K L N Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGDNE 662 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 T + V + Q+ LL +P + +I++ Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|257077439|ref|ZP_05571800.1| valyl-tRNA synthetase [Enterococcus faecalis JH1] gi|294779640|ref|ZP_06745031.1| valine--tRNA ligase [Enterococcus faecalis PC1.1] gi|307269913|ref|ZP_07551239.1| valyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|256985469|gb|EEU72771.1| valyl-tRNA synthetase [Enterococcus faecalis JH1] gi|294453297|gb|EFG21708.1| valine--tRNA ligase [Enterococcus faecalis PC1.1] gi|306513703|gb|EFM82309.1| valyl-tRNA synthetase [Enterococcus faecalis TX4248] Length = 880 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/273 (26%), Positives = 119/273 (43%), Gaps = 23/273 (8%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P V G DI+ F Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIAF 490 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P + V HG I +G K+SKSLGN IDP++VIE+ G DALR+ Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL A G+D + + + N N I N SR V M + +GM I G Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 T +D IL+ + + + E A Q+ + + + D Y + K L N Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGDNE 662 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 T + V + Q+ LL +P + +I+ Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIW 695 Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|328957160|ref|YP_004374546.1| valine--tRNA ligase [Carnobacterium sp. 17-4] gi|328673484|gb|AEB29530.1| valine--tRNA ligase [Carnobacterium sp. 17-4] Length = 881 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 20/198 (10%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P+D + ++ W + +T G+ D +++P + V G DI+ F Sbjct: 431 GMEAPEDNENWVQDPDVLDTWFSSALWPFSTMGWPDEDSEDFKRYFPTNTLVTGYDIIFF 490 Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ +L K V HG I G K+SKSLGN IDP++VIE+ G DA Sbjct: 491 ----WVSRMMFQSLEFTGKRPFNNVLIHGLIRDTDGRKMSKSLGNGIDPMDVIEKYGADA 546 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAF 383 LR+FL A G+D + D + N N I N SR M ++++ I G Sbjct: 547 LRWFLSNGSAPGQDVRFSYDKMDAAWN--FINKIWN-ASRFTLMNMENFTVDQIDLTGEK 603 Query: 384 TESDESILSVCSRVLQEI 401 T +D IL+ + ++++ Sbjct: 604 TVADRWILTKLNETVEKV 621 Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 18/117 (15%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 ++ K S I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 35 DKTKEAYSVVIPPPNVTGKLHLGHAWDTTLQDIIVRQKRMQGFDTLWLPGMDHAG----- 89 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHHDTCRILWKKIS 114 A A V K+ D SR D+ + FI T ++ + R W K+ Sbjct: 90 IATQAKVEAKLAEDGISR--------YDLGREKFIDTVWDWKEEYASVIREQWAKVG 138 >gi|314936231|ref|ZP_07843578.1| valine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] gi|313654850|gb|EFS18595.1| valine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] Length = 876 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 18/261 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + ++P ++ V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPNEEAKDYQHYYPTNVLVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K V HG + G K+SKSLGN +DP++VIE+ G D+LRYFL + G D Sbjct: 499 TGKRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIEKYGADSLRYFLATGSSPGNDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + ++ Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIE 616 Query: 400 EI---RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 + E + + RAL I D Y + K + + + T V + Sbjct: 617 TVTNLSEKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNGEDESQKQTTRSVLSYTLD 674 Query: 457 QLAILLQAFVPKLANKIFDIL 477 Q+ +L F+P + KI+ L Sbjct: 675 QIMRMLHPFMPFVTEKIWQSL 695 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 13/67 (19%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 38 TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMD-----------HAGI 86 Query: 68 TTKVFVD 74 T+ VD Sbjct: 87 ATQAKVD 93 >gi|255102404|ref|ZP_05331381.1| valyl-tRNA synthetase [Clostridium difficile QCD-63q42] Length = 888 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 19/256 (7%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWP-AFLLSANLPL 286 W + +T G+ P+ ++A ++P + V G DI+ F + A + N Sbjct: 454 TWFSSALWPFSTLGW---PNKTEALDYYYPTSVLVTGYDIIFFWVVRMAFAGMFCMNEKP 510 Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345 V HG + +G K+SKSLGN IDP+E+IE+ G DALR+ L + G D + + Sbjct: 511 FDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADALRFTLTTGNSPGNDMRFYMER 570 Query: 346 LKKRVNADLANGIGNLVSRSVSM-----ILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ N AN + N SR V M I+K+ T +D+ I+S + +++E Sbjct: 571 VEFARN--FANKLWN-ASRFVFMNIDEDIIKNMTRE-SVKEDLTLADKWIISRANNIVKE 626 Query: 401 IRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 NM + AL ++ SE D Y + KP L + + S LY V+ ++ Sbjct: 627 ATNNMDKFDLGIALQKIYDFTWSEYCDWYIEMVKP-RLYGEDANAKSAALYTLTYVLEKI 685 Query: 459 AILLQAFVPKLANKIF 474 LL ++P + +I+ Sbjct: 686 LKLLHPYMPFITEEIY 701 >gi|229543663|ref|ZP_04432723.1| valyl-tRNA synthetase [Bacillus coagulans 36D1] gi|229328083|gb|EEN93758.1| valyl-tRNA synthetase [Bacillus coagulans 36D1] Length = 881 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 32/223 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ D + S + ER + ++D +SR+ + WG +IP Sbjct: 364 WFVKMQPLADAAVKLQASEGKVHFVPERFEKTYLHWMENIRDWCISRQLW-WGHRIPAWY 422 Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 DP ++ W + +T G+ D +++P D Sbjct: 423 HKETGEVYVDTEPPRDIENWEQDPD-VLDTWFSSALWPFSTMGWPDEEAKDYKRYYPTDT 481 Query: 261 HVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVI 317 V G DI+ F + + + P K V HG + +G K+SKSLGN +DP+EVI Sbjct: 482 LVTGYDIIFFWVSRMIFQGLAFTGKRPF-KDVLIHGLVRDEQGRKMSKSLGNGVDPMEVI 540 Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 ++ G D+LRYFL A G+D + + ++ N AN I N Sbjct: 541 DKYGADSLRYFLTTGSAPGQDLRFSYEKVEAVWN--FANKIWN 581 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 69/173 (39%), Gaps = 31/173 (17%) Query: 5 EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 EK + I PN + H+GHA++ + D+L R R+ G DVL+ G D G A Sbjct: 38 EKKPYTIVIPPPNVTGKLHLGHAWDTALQDILTRMKRMQGYDVLWLPGMDHAG-----IA 92 Query: 63 QNAGVTTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTE 99 A V K+ + SR F + A Y FIR T + Sbjct: 93 TQAKVEAKLREEGKSRYDLGREKFTEEAWKWKAEYAQFIRKQWAKLGLGLDYSRERFTLD 152 Query: 100 KRHHDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYN 151 + + ++ + KG IY+G Y W A + + VYK G +Y+ Sbjct: 153 EGLSKAVKEVFVSLYKKGLIYRGEYIINWDPETKTALSDIEVVYKEVQGAFYH 205 >gi|126653698|ref|ZP_01725617.1| valyl-tRNA synthetase [Bacillus sp. B14905] gi|126589735|gb|EAZ83870.1| valyl-tRNA synthetase [Bacillus sp. B14905] Length = 881 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 20/185 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D + +++P + V G DI+ F W + ++ L Sbjct: 448 VLDTWFSSALWPFSTMGWPDEANEEYKRYYPTNTLVTGYDIIFF----WVSRMIFQGLEF 503 Query: 287 P-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K V HG + +G K+SKSLGN +DP++VIE+ G D+LRYFL + G+D Sbjct: 504 TEQRPFKDVLIHGLVRDGEGRKMSKSLGNGVDPMDVIEQYGADSLRYFLATGSSPGQDLR 563 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSR 396 Y + ++ N +N I N + L + DGM I G + +D+ IL+ + Sbjct: 564 YTTEKVEAVWN--FSNKIWN----ASRFALMNMDGMTYDEIDLTGEKSVADKWILTRLNE 617 Query: 397 VLQEI 401 ++ + Sbjct: 618 TIERV 622 Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 33/172 (19%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D+L R R+ G D L+ G D G A A V Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDILIRMKRMQGYDALWLPGMDHAG-----IATQAKV 96 Query: 68 TTKVFVDQNSR---------------------NFRDMADVLDISYDDFIR---TTEKRHH 103 K+ D +R + RD L + D+ R T +K Sbjct: 97 EAKLREDNITRYDLGREKFLEKTWEWKEEYAGHIRDQWAKLGLGL-DYTRERFTLDKGLS 155 Query: 104 DTCRILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + ++ ++ +KG IY+G W A + + +Y+ G +Y+ ++ Sbjct: 156 EAVNTVFVQLYEKGLIYRGERIINWDPAAKTALSDIEVIYQDVQGAFYHMKY 207 >gi|169829404|ref|YP_001699562.1| valyl-tRNA synthetase [Lysinibacillus sphaericus C3-41] gi|168993892|gb|ACA41432.1| Valyl-tRNA synthetase [Lysinibacillus sphaericus C3-41] Length = 881 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 20/185 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D + +++P + V G DI+ F W + ++ L Sbjct: 448 VLDTWFSSALWPFSTMGWPDEANEEYKRYYPTNTLVTGYDIIFF----WVSRMIFQGLEF 503 Query: 287 P-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K V HG + +G K+SKSLGN +DP++VIE+ G D+LRYFL + G+D Sbjct: 504 TEQRPFKDVLIHGLVRDGEGRKMSKSLGNGVDPMDVIEQYGADSLRYFLATGSSPGQDLR 563 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSR 396 Y + ++ N +N I N + L + DGM I G + +D+ IL+ + Sbjct: 564 YTTEKVEAVWN--FSNKIWN----ASRFALMNMDGMTYDEIDLTGEKSVADKWILTRLNE 617 Query: 397 VLQEI 401 ++ + Sbjct: 618 TIERV 622 Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 33/172 (19%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D+L R R+ G D L+ G D G A A V Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDILIRMKRMQGYDALWLPGMDHAG-----IATQAKV 96 Query: 68 TTKVFVDQNSR---------------------NFRDMADVLDISYDDFIR---TTEKRHH 103 K+ D +R + RD L + D+ R T +K Sbjct: 97 EAKLREDNITRYDLGREKFLEKTWEWKEEYAGHIRDQWAKLGLGL-DYTRERFTLDKGLS 155 Query: 104 DTCRILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + ++ ++ +KG IY+G W A + + +Y+ G +Y+ ++ Sbjct: 156 EAVNTVFVQLYEKGLIYRGERIINWDPAAKTALSDIEVIYQDVQGAFYHMKY 207 >gi|168024570|ref|XP_001764809.1| predicted protein [Physcomitrella patens subsp. patens] gi|162684103|gb|EDQ70508.1| predicted protein [Physcomitrella patens subsp. patens] Length = 906 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 93/216 (43%), Gaps = 49/216 (22%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F + DK L E I+P +R ++ +F S +KD +SR+ + WG +IP Sbjct: 357 WFVIMQPLADKALKALEDGELRIIP-DRFEKIYNFWLSNIKDWCVSRQLW-WGHRIPVWY 414 Query: 222 ----DDPQYIMY----------------------------VWIDALTNYLTTTGYLDNPD 249 D+ YI+ W + +T G+ + Sbjct: 415 VEGSDESDYIVARSEEDAYKAARAKHGEDVKLTQESDVLDTWFSSGLWPFSTLGWPNTSA 474 Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFIL-HKGEK 302 +F+P + G DIL F W A ++ + LP V+ HG + +G K Sbjct: 475 DDYQRFYPTAVLETGHDILFF----WVARMIMMGIEFTGKLPF-STVYLHGLVRDAQGRK 529 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 +SKSLGNVIDP++ IEE G DALR+ L G+D Sbjct: 530 MSKSLGNVIDPLDTIEEYGTDALRFTLATGTTPGQD 565 >gi|330834408|ref|YP_004409136.1| valyl-tRNA synthetase [Metallosphaera cuprina Ar-4] gi|329566547|gb|AEB94652.1| valyl-tRNA synthetase [Metallosphaera cuprina Ar-4] Length = 808 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 20/266 (7%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLP 287 VWID+ L +G+ + + AK +PAD+ + G DI+R Y + +L+ N+P Sbjct: 471 VWIDSSVTVLYLSGFYTDREKF-AKVFPADVRLQGTDIIRTWLFYTLFRTLILADNVPF- 528 Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 KKV HG +L G ++SKS GNV+ P++ ++E G DA+R L+ + + G D + D + Sbjct: 529 KKVIVHGQVLGPDGTRMSKSKGNVVSPLDRLDEFGADAIRMTLL-DASLGDDFPFKWDTV 587 Query: 347 KKRVNADLAN-GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405 K + G L + + P + D+ IL+ +++ + Sbjct: 588 KGKKLLLQKLWNAGRLAYPFIK------GNNVHKPDSLHLLDQWILAKHKEFVEKSIQAY 641 Query: 406 QNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463 +NQ L+ + + E D Y + +K + +Y VI+ L ILL Sbjct: 642 ENQDFFVILSMLYNYFWETIADEYLEL-----IKHRLFSGDESAIYTLKRVIKDLIILLH 696 Query: 464 AFVPKLANKIFDILFVADENRCFQSL 489 P + +I+ +LF E+ +S+ Sbjct: 697 PIAPHITEEIYSLLFGEKESVLLESI 722 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 28/49 (57%) Query: 7 LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 +I T + + + H+GHAY + IAD + RF +L G +VL G D G Sbjct: 52 FFIDTPPPFTSGELHMGHAYWVTIADAMGRFKKLQGYNVLLPQGWDTQG 100 >gi|308174506|ref|YP_003921211.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|307607370|emb|CBI43741.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|328554425|gb|AEB24917.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens TA208] gi|328912829|gb|AEB64425.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens LL3] Length = 880 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/281 (25%), Positives = 125/281 (44%), Gaps = 33/281 (11%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P+D + ++ W + +T G+ D +++ D+ V G DI+ F Sbjct: 432 GLEAPEDSENWEQDSDVLDTWFSSALWPFSTMGWPDENAEDFKRYYSTDVLVTGYDIIFF 491 Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ L K V HG I +G K+SKSLGN +DP++VI++ G D+ Sbjct: 492 ----WVSRMIFQGLEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDKYGADS 547 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380 LRYFL + G+D + + ++ N AN I N + L + DGM + Sbjct: 548 LRYFLATGSSPGQDLRFSYEKVESTWN--FANKIWN----ASRFALMNMDGMTYDELDLS 601 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438 G + +D+ IL+ + ++++ + + + + + D Y + K L Sbjct: 602 GEKSVADKWILTRLNETIEDVTQLADRYEFGEVGRHLYNFIWDDVCDWYIEMAK---LPL 658 Query: 439 TNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D A+ T V V+ Q LL F+P L +I+ L Sbjct: 659 YGEDEAAKKTTRSVLAYVLDQTMRLLHPFMPFLTEEIWQHL 699 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G DVL+ G D G A A V Sbjct: 43 SVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAG-----IATQAKV 97 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ SR F + Y DFIR T ++ + Sbjct: 98 EAKLREQGTSRYDLGREKFLEETWKWKEEYADFIRSQWAKMGLGLDYSRERFTLDEGLNK 157 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 R ++ K+ +KG IY+G Y W A + + +YK G +Y+ ++ Sbjct: 158 AVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHLRY 208 >gi|307288317|ref|ZP_07568312.1| valyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|306500703|gb|EFM70025.1| valyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|315165976|gb|EFU09993.1| valyl-tRNA synthetase [Enterococcus faecalis TX1302] Length = 880 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 45/345 (13%) Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F ++ +K + E+ EF P R N+ + D +SR+ + WG +IP Sbjct: 363 WFVKMGPLAEKAMKNQETEDAVEFYPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419 Query: 222 -------------DDP---------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 ++P ++ W + +T G+ D +++P Sbjct: 420 WYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTS 479 Query: 260 LHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316 V G DI+ F + + + + P + V HG I +G K+SKSLGN IDP++V Sbjct: 480 TLVTGYDIIFFWVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDV 538 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 IE+ G DALR+FL A G+D + + + N N I N SR V M + +GM Sbjct: 539 IEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGM 592 Query: 377 ----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G T +D IL+ + + + E A Q+ + + + D Y + Sbjct: 593 TAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEM 652 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 K L N T + V + Q+ LL +P + +I++ Sbjct: 653 SKE-ILYGENEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|228997294|ref|ZP_04156916.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17] gi|229004919|ref|ZP_04162646.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4] gi|228756267|gb|EEM05585.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4] gi|228762386|gb|EEM11311.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17] Length = 1033 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/256 (27%), Positives = 127/256 (49%), Gaps = 15/256 (5%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ A L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGVDQTRGWFYSLLAVAALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 +P K+V S G +L +G+K+SKS GN +DP+E++E+ G DALR+ L+ + A + Sbjct: 572 VPY-KRVLSLGHVLDEQGQKMSKSKGNALDPVELVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 + +++ + L + + N+ S V L Y+ T+ DE +LS ++++ Sbjct: 631 ERTVQE-AKSKLVDTLVNVYSFYVLYTNLDKYNPKEKYEVKRTKLDEWVLSRLHSTVKQV 689 Query: 402 RENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIRQ 457 R + A ++ LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 690 RNALDEYQFTNAAREIAVLVDEVSNWYVRRSRNRFWE-SGMNLEKAAA--YETLHEVLVT 746 Query: 458 LAILLQAFVPKLANKI 473 L+ LL F P +A I Sbjct: 747 LSKLLAPFTPFVAEDI 762 Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G VL G D HG Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMTGYKVLRKAGWDTHG 88 >gi|242373956|ref|ZP_04819530.1| valyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] gi|242348310|gb|EES39912.1| valyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] Length = 887 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 18/261 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 454 VLDTWFSSALWPFSTLGWPDTDSEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 509 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 510 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 569 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + ++ Sbjct: 570 YSTEKVESVWN--FINKIWNAARFSLMNIGEDFKVEDIDLSGELSLADKWILTRLNETIK 627 Query: 400 ---EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 E+ + + + RAL I D Y + K + + + T V V+ Sbjct: 628 TVTELSDKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNSDDETQKQTTRSVLSYVLD 685 Query: 457 QLAILLQAFVPKLANKIFDIL 477 ++ +L F+P + I+ L Sbjct: 686 KIMKMLHPFMPFVTETIWQSL 706 Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G IA Sbjct: 41 EDKSKDTYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAG--IA 98 Query: 60 KAAQ 63 A+ Sbjct: 99 TQAK 102 >gi|255970840|ref|ZP_05421426.1| valyl-tRNA synthetase [Enterococcus faecalis T1] gi|256958166|ref|ZP_05562337.1| valyl-tRNA synthetase [Enterococcus faecalis DS5] gi|300860819|ref|ZP_07106906.1| valine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|307275085|ref|ZP_07556239.1| valyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|312899334|ref|ZP_07758668.1| valyl-tRNA synthetase [Enterococcus faecalis TX0470] gi|312952220|ref|ZP_07771097.1| valyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|255961858|gb|EET94334.1| valyl-tRNA synthetase [Enterococcus faecalis T1] gi|256948662|gb|EEU65294.1| valyl-tRNA synthetase [Enterococcus faecalis DS5] gi|300849858|gb|EFK77608.1| valine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|306508203|gb|EFM77319.1| valyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|310629807|gb|EFQ13090.1| valyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|311293536|gb|EFQ72092.1| valyl-tRNA synthetase [Enterococcus faecalis TX0470] gi|315036220|gb|EFT48152.1| valyl-tRNA synthetase [Enterococcus faecalis TX0027] gi|315154542|gb|EFT98558.1| valyl-tRNA synthetase [Enterococcus faecalis TX0031] gi|315160097|gb|EFU04114.1| valyl-tRNA synthetase [Enterococcus faecalis TX0312] gi|315169319|gb|EFU13336.1| valyl-tRNA synthetase [Enterococcus faecalis TX1341] gi|315174736|gb|EFU18753.1| valyl-tRNA synthetase [Enterococcus faecalis TX1346] Length = 880 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P V G DI+ F Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIFF 490 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P + V HG I +G K+SKSLGN IDP++VIE+ G DALR+ Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL A G+D + + + N N I N SR V M + +GM I G Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 T +D IL+ + + + E A Q+ + + + D Y + K L N Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGDNE 662 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 T + V + Q+ LL +P + +I++ Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|47458993|ref|YP_015855.1| valyl-tRNA synthetase [Mycoplasma mobile 163K] gi|81614378|sp|Q6KID2|SYV_MYCMO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|47458321|gb|AAT27644.1| valyl-tRNA synthetase [Mycoplasma mobile 163K] Length = 839 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/141 (34%), Positives = 77/141 (54%), Gaps = 9/141 (6%) Query: 243 GYLDNPDGSK--AKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL- 297 +L+ P S+ +++P + V DI+ F +Y+ N+P KK HG I Sbjct: 454 SFLNWPQKSEFLKRYYPTSVIVTAYDIIFFWVARMYFMGIYSMKNIPF-KKALIHGLIRD 512 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 +G K+SKSLGN IDP+++IE+ G D+LR+FL+ G+D ++ D ++ L N Sbjct: 513 EQGRKMSKSLGNGIDPMDLIEKYGADSLRWFLMTNSTPGQDIRFNYDKIESA--WSLINK 570 Query: 358 IGNLVSRSVSMILKDYDGMIP 378 I N +SR + M+ D +IP Sbjct: 571 IWN-ISRYIKMLDSDKKEIIP 590 Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72 PN + HIGHA+ + D L R RL G DVL+ GTD G + + K+F Sbjct: 41 PNVTGKLHIGHAWNTTLQDFLIRLKRLQGYDVLWLPGTDHAGIATQAKVEKRLLDQKIF 99 >gi|257888392|ref|ZP_05668045.1| valyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|293570381|ref|ZP_06681438.1| valyl-tRNA synthetase [Enterococcus faecium E980] gi|257824446|gb|EEV51378.1| valyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|291609559|gb|EFF38824.1| valyl-tRNA synthetase [Enterococcus faecium E980] Length = 881 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 87/349 (24%), Positives = 144/349 (41%), Gaps = 53/349 (15%) Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ K + E+ EF P R N+ + D +SR+ + WG +IP Sbjct: 363 WFVKMAPLAKKAIDNQETDQAVEFFPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419 Query: 222 -----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258 DP ++ W + +T G+ D +++P Sbjct: 420 WYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDYKRYFPT 478 Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVID 312 V G DI+ F W + ++ +L + V HG I +G K+SKSLGN ID Sbjct: 479 STLVTGYDIIFF----WVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNGID 534 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 P+EVIE+ G DALR+FL A G+D + + + N N I N SR V M + Sbjct: 535 PMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---N 588 Query: 373 YDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 +GM I G + +D IL+ + + + E A Q+ + + + D Sbjct: 589 IEGMTVEEIDLSGEKSVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDW 648 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 Y + K L + T + V + Q+ LL +P + +I++ Sbjct: 649 YIEMSKE-VLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWE 696 Score = 43.5 bits (101), Expect = 0.076, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D+L R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEAKLR 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+DQ + M LD S + F T + + R Sbjct: 102 EQGISRYDLGREKFIDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDDGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G Y W A + + ++K +G +Y+ + Sbjct: 160 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 207 >gi|321312568|ref|YP_004204855.1| leucyl-tRNA synthetase [Bacillus subtilis BSn5] gi|320018842|gb|ADV93828.1| leucyl-tRNA synthetase [Bacillus subtilis BSn5] Length = 804 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 11/196 (5%) Query: 3 EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 E++K Y YP+ A H+GH D+L+R R+ G DVL G D G + Sbjct: 29 EKQKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQY 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G VF QN NFR L SY D I TT+ ++ + ++ K+ +KG Sbjct: 89 ALDTGNDPAVFTKQNIDNFRRQIQALGFSYDWDREINTTDPEYYKWTQWIFLKLYEKGLA 148 Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 Y W N++ + DG+ H PV+ + + +++AY D+LL Sbjct: 149 YVDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLLE 203 Query: 179 YYES--HPEFILPIER 192 E PE I ++R Sbjct: 204 DLEELDWPESIKDMQR 219 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 35/155 (22%) Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISK 305 K+ P D+++ G + H +Y W FL + K K+++ G IL EK+SK Sbjct: 520 KWLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSK 579 Query: 306 SLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKK----------- 348 S GNV++P E++ G D LR + L IA + G DG ++ Sbjct: 580 SKGNVVNPDEIVSSHGADTLRLYEMFMGPLDASIAWSESGL---DGARRFLDRVWRLFVE 636 Query: 349 ---RVNADLANGIGNLVSR----SVSMILKDYDGM 376 +N + G G + R +V + Y+G+ Sbjct: 637 ENGELNGKIVEGAGETLERVYHETVMKVTDHYEGL 671 >gi|255657212|ref|ZP_05402621.1| valyl-tRNA synthetase [Clostridium difficile QCD-23m63] gi|296451948|ref|ZP_06893663.1| valine--tRNA ligase [Clostridium difficile NAP08] gi|296259139|gb|EFH06019.1| valine--tRNA ligase [Clostridium difficile NAP08] Length = 888 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/257 (28%), Positives = 120/257 (46%), Gaps = 21/257 (8%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWP-AFLLSANLPL 286 W + +T G+ P+ ++A ++P + V G DI+ F + A + N Sbjct: 454 TWFSSALWPFSTLGW---PNKTEALDYYYPTSVLVTGYDIIFFWVVRMAFAGMFCMNEKP 510 Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKD 344 V HG + +G K+SKSLGN IDP+E+IE+ G DALR+ L + G D FY + Sbjct: 511 FDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADALRFTLTTGNSPGNDMRFYME- 569 Query: 345 GLKKRVNADLANGIGNLVSRSVSM-----ILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399 + + AN + N SR V M I+K+ T +D+ I+S + +++ Sbjct: 570 --RVEFARNFANKLWN-ASRFVFMNIDEDIIKNMTRE-SVKEDLTLADKWIISRANNIVK 625 Query: 400 EIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 E NM + AL ++ SE D Y + KP L + + S LY V+ + Sbjct: 626 EATNNMDKFDLGIALQKIYDFTWSEYCDWYIEMVKP-RLYGEDTNAKSAALYTLTYVLEK 684 Query: 458 LAILLQAFVPKLANKIF 474 + LL ++P + +I+ Sbjct: 685 ILKLLHPYMPFITEEIY 701 >gi|258592110|emb|CBE68415.1| leucine tRNA synthetase [NC10 bacterium 'Dutch sediment'] Length = 864 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 8/192 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ER K Y+ YP+ + H+GH I DVLARF R+ G +VL G D G AA Sbjct: 31 ERRKFYLLEMYPYPSGRIHMGHVRNYAIGDVLARFLRMRGYNVLHPMGWDSFGLPAENAA 90 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + N R + SYD I ++ ++ + L+ K+ +KG +Y Sbjct: 91 IEHRTQPARWTSDNIAYMRTQLKRMGFSYDWQREITCSDPAYYRWGQWLFLKLYEKGLVY 150 Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 K + W + N+ +G V E G+FFR++AY D+LLS Sbjct: 151 KKSSAVNWCEVCQTVLANEQ-----VEGGLCWRDGTSVVQKELPGWFFRITAYADELLSS 205 Query: 180 YESHPEFILPIE 191 ++ + P++ Sbjct: 206 LDNLSGWPEPVK 217 Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 83/183 (45%), Gaps = 24/183 (13%) Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKS NV+DP +++ + G D R F + +D + G++ G Sbjct: 613 EKMSKSKKNVVDPEDLLTQYGADTARIFCLFAAPPERDLEWSDQGVE---------GSFR 663 Query: 361 LVSRSVSMILKDYDGMIPTPG---AFTE--SDESILSVCSRVLQEIRENMQNQL-IHRAL 414 + R V +I +D + ++ P AF + + ++ + ++ + E++++ + A+ Sbjct: 664 FLCRIVRLI-EDQEALLKEPNPSIAFQKLIAGRALYRKAQQTIKRVTEDIEDDFHFNTAI 722 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + ++ L +E+ R+ EL + D A + L +LL F P L +++ Sbjct: 723 SALMELANEIGRF-------ELVGSA-DDADERRVAYSYAVETLLLLLSPFAPHLCEELW 774 Query: 475 DIL 477 + L Sbjct: 775 ERL 777 >gi|257899235|ref|ZP_05678888.1| valyl-tRNA synthetase [Enterococcus faecium Com15] gi|257837147|gb|EEV62221.1| valyl-tRNA synthetase [Enterococcus faecium Com15] Length = 881 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 87/349 (24%), Positives = 144/349 (41%), Gaps = 53/349 (15%) Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ K + E+ EF P R N+ + D +SR+ + WG +IP Sbjct: 363 WFVKMAPLAKKAIDNQETDQAVEFFPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419 Query: 222 -----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258 DP ++ W + +T G+ D +++P Sbjct: 420 WYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDYKRYFPT 478 Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVID 312 V G DI+ F W + ++ +L + V HG I +G K+SKSLGN ID Sbjct: 479 STLVTGYDIIFF----WVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNGID 534 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 P+EVIE+ G DALR+FL A G+D + + + N N I N SR V M + Sbjct: 535 PMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---N 588 Query: 373 YDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 +GM I G + +D IL+ + + + E A Q+ + + + D Sbjct: 589 IEGMTVEEIDLSGEKSVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDW 648 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 Y + K L + T + V + Q+ LL +P + +I++ Sbjct: 649 YIEMSKE-VLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWE 696 Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D+L R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEAKLR 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+DQ + M LD S + F T + + R Sbjct: 102 EQGISRYDLGREKFIDQVWEWKEEYANHIREQWAKMGLSLDYSRERF--TLDDGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G Y W A + + ++K +G +Y+ + Sbjct: 160 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 207 >gi|327354732|gb|EGE83589.1| leucyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188] Length = 966 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 11/196 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y+ + YP+ H+GH I+DVLARF + G DVL G D G AA Sbjct: 63 KEKAYVLSMFPYPSGALHMGHVRVYTISDVLARFKHMKGYDVLHPMGWDAFGLPAENAAI 122 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 G+ + QN N ++ + +D + + + + + T RI + +KG Y Sbjct: 123 ERGIDPARWTMQNIANMKEQLRAIGARFDWDRELMTCSPEFYKHTQRIF-LMLYEKGLAY 181 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL--- 177 + Y D+ +++V A+G + + V+ +E + +FFR++A+++ LL Sbjct: 182 QAKALVNYDPVDKTVLANEQV--DANGCSWRSGAK-VEKVELKQWFFRITAFKEALLKDL 238 Query: 178 -SYYESHPEFILPIER 192 S PE +L ++R Sbjct: 239 DSLAAGWPERVLSMQR 254 >gi|291485466|dbj|BAI86541.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195] Length = 804 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 11/196 (5%) Query: 3 EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 E++K Y YP+ A H+GH D+L+R R+ G DVL G D G + Sbjct: 29 EKQKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQY 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G VF QN NFR L SY D I TT+ ++ + ++ K+ +KG Sbjct: 89 ALDTGNDPAVFTKQNIDNFRRQIQALGFSYDWDREINTTDPEYYKWTQWIFLKLYEKGLA 148 Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 Y W N++ + DG+ H PV+ + + +++AY D+LL Sbjct: 149 YVDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLLE 203 Query: 179 YYES--HPEFILPIER 192 E PE I ++R Sbjct: 204 DLEELDWPESIKDMQR 219 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 35/155 (22%) Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISK 305 K+ P D+++ G + H +Y W FL + K K+++ G IL EK+SK Sbjct: 520 KWLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSK 579 Query: 306 SLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKK----------- 348 S GNV++P E++ G D LR + L IA + G DG ++ Sbjct: 580 SKGNVVNPDEIVASHGADTLRLYEMFMGPLDASIAWSESGL---DGARRFLDRVWRLFIE 636 Query: 349 ---RVNADLANGIGNLVSR----SVSMILKDYDGM 376 +N + G G + R +V + Y+G+ Sbjct: 637 DSGELNGKIVEGAGETLERVYHETVMKVTDHYEGL 671 >gi|254976852|ref|ZP_05273324.1| valyl-tRNA synthetase [Clostridium difficile QCD-66c26] gi|255094239|ref|ZP_05323717.1| valyl-tRNA synthetase [Clostridium difficile CIP 107932] gi|255315992|ref|ZP_05357575.1| valyl-tRNA synthetase [Clostridium difficile QCD-76w55] gi|255518649|ref|ZP_05386325.1| valyl-tRNA synthetase [Clostridium difficile QCD-97b34] gi|255651771|ref|ZP_05398673.1| valyl-tRNA synthetase [Clostridium difficile QCD-37x79] gi|260684797|ref|YP_003216082.1| valyl-tRNA synthetase [Clostridium difficile CD196] gi|260688455|ref|YP_003219589.1| valyl-tRNA synthetase [Clostridium difficile R20291] gi|260210960|emb|CBA66224.1| valyl-tRNA synthetase [Clostridium difficile CD196] gi|260214472|emb|CBE06944.1| valyl-tRNA synthetase [Clostridium difficile R20291] Length = 888 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 19/256 (7%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWP-AFLLSANLPL 286 W + +T G+ P+ ++A ++P + V G DI+ F + A + N Sbjct: 454 TWFSSALWPFSTLGW---PNKTEALDYYYPTSVLVTGYDIIFFWVVRMAFAGMFCMNEKP 510 Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345 V HG + +G K+SKSLGN IDP+E+IE+ G DALR+ L + G D + + Sbjct: 511 FDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADALRFTLTTGNSPGNDMRFYMER 570 Query: 346 LKKRVNADLANGIGNLVSRSVSM-----ILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ N AN + N SR V M I+K+ T +D+ I+S + +++E Sbjct: 571 VEFARN--FANKLWN-ASRFVFMNIDEDIIKNMTRE-SVKEDLTLADKWIISRANNIVKE 626 Query: 401 IRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 NM + AL ++ SE D Y + KP L + + S LY V+ ++ Sbjct: 627 ATNNMDKFDLGIALQKIYDFTWSEYCDWYIEMVKP-RLYGEDANAKSAALYTLTYVLEKI 685 Query: 459 AILLQAFVPKLANKIF 474 LL ++P + +I+ Sbjct: 686 LKLLHPYMPFITEEIY 701 >gi|52424393|ref|YP_087530.1| leucyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E] gi|60390681|sp|Q65VR5|SYL_MANSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|52306445|gb|AAU36945.1| LeuS protein [Mannheimia succiniciproducens MBEL55E] Length = 860 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH IADV++R+ R++G +VL G D G AA Sbjct: 32 KEKYYCLSMFPYPSGRLHMGHVRNYTIADVVSRYQRMNGKNVLQPVGWDAFGLPAEGAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N ++ +L SY D I T + ++ + + ++ KG +YK Sbjct: 92 KNKTAPAKWTYENIDYMKNQLKMLGFSYDWDREIATCKPEYYKWEQWFFTELYKKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + DE +++V++G + PV+ E +F +++ Y ++LLS + Sbjct: 152 KTSVVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLSGLD 207 Query: 182 SHPEF 186 + PE+ Sbjct: 208 TLPEW 212 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 28/136 (20%), Positives = 67/136 (49%), Gaps = 14/136 (10%) Query: 296 ILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 ++H G K+SKS N IDP E++E+ G D +R F++ + + G++ Sbjct: 612 LVHAGMTKMSKSKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVE------- 664 Query: 355 ANGIGNLVSRSVSMIL---KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLI 410 G + R +++ K+ P P A + + +++ + + ++ +++ + Q Sbjct: 665 --GAKRFLGRLWNLVFEYNKNPVKTAPNPTALSSAQKALRRDVHKTIAKVSDDIGRRQTF 722 Query: 411 HRALAQVISLVSEVDR 426 + A+A ++ L++++ R Sbjct: 723 NTAIAAIMELMNKLTR 738 >gi|16080084|ref|NP_390910.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221310971|ref|ZP_03592818.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221315298|ref|ZP_03597103.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320215|ref|ZP_03601509.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. JH642] gi|221324497|ref|ZP_03605791.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY] gi|3123286|sp|P36430|SYL_BACSU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|2293181|gb|AAC00259.1| leucine tRNA synthetase [Bacillus subtilis] gi|2635516|emb|CAB15010.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] Length = 804 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 11/196 (5%) Query: 3 EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 E++K Y YP+ A H+GH D+L+R R+ G DVL G D G + Sbjct: 29 EKQKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQY 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G VF QN NFR L SY D I TT+ ++ + ++ K+ +KG Sbjct: 89 ALDTGNDPAVFTKQNIDNFRRQIQALGFSYDWDREINTTDPEYYKWTQWIFLKLYEKGLA 148 Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 Y W N++ + DG+ H PV+ + + +++AY D+LL Sbjct: 149 YVDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLLE 203 Query: 179 YYES--HPEFILPIER 192 E PE I ++R Sbjct: 204 DLEELDWPESIKDMQR 219 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 35/155 (22%) Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISK 305 K+ P D+++ G + H +Y W FL + K K+++ G IL EK+SK Sbjct: 520 KWLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSK 579 Query: 306 SLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKK----------- 348 S GNV++P E++ G D LR + L IA + G DG ++ Sbjct: 580 SKGNVVNPDEIVASHGADTLRLYEMFMGPLDASIAWSESGL---DGARRFLDRVWRLFIE 636 Query: 349 ---RVNADLANGIGNLVSR----SVSMILKDYDGM 376 +N + G G + R +V + Y+G+ Sbjct: 637 DSGELNGKIVEGAGETLERVYHETVMKVTDHYEGL 671 >gi|227550359|ref|ZP_03980408.1| valine--tRNA ligase [Enterococcus faecium TX1330] gi|257897234|ref|ZP_05676887.1| valyl-tRNA synthetase [Enterococcus faecium Com12] gi|293378006|ref|ZP_06624184.1| valine--tRNA ligase [Enterococcus faecium PC4.1] gi|227180498|gb|EEI61470.1| valine--tRNA ligase [Enterococcus faecium TX1330] gi|257833799|gb|EEV60220.1| valyl-tRNA synthetase [Enterococcus faecium Com12] gi|292643371|gb|EFF61503.1| valine--tRNA ligase [Enterococcus faecium PC4.1] Length = 881 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 87/349 (24%), Positives = 144/349 (41%), Gaps = 53/349 (15%) Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ K + E+ EF P R N+ + D +SR+ + WG +IP Sbjct: 363 WFVKMAPLAKKAIDNQETDQAVEFFPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419 Query: 222 -----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258 DP ++ W + +T G+ D +++P Sbjct: 420 WYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDYKRYFPT 478 Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVID 312 V G DI+ F W + ++ +L + V HG I +G K+SKSLGN ID Sbjct: 479 STLVTGYDIIFF----WVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNGID 534 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 P+EVIE+ G DALR+FL A G+D + + + N N I N SR V M + Sbjct: 535 PMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---N 588 Query: 373 YDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 +GM I G + +D IL+ + + + E A Q+ + + + D Sbjct: 589 IEGMTVEEIDLSGEKSVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDW 648 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 Y + K L + T + V + Q+ LL +P + +I++ Sbjct: 649 YIEMSKE-VLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWE 696 Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D+L R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEAKLR 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+DQ + M LD S + F T + + R Sbjct: 102 EQGISRYDLGREKFIDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDDGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G Y W A + + ++K +G +Y+ + Sbjct: 160 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 207 >gi|56421173|ref|YP_148491.1| valyl-tRNA synthetase [Geobacillus kaustophilus HTA426] gi|81819656|sp|Q5KWL3|SYV_GEOKA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|56381015|dbj|BAD76923.1| valyl-tRNA synthetase [Geobacillus kaustophilus HTA426] Length = 880 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 40/229 (17%) Query: 204 LKDLSLSRKTFDWGIKIP------------------------DDPQYIMYVWIDALTNYL 239 ++D +SR+ + WG +IP DP ++ W + Sbjct: 403 IRDWCISRQLW-WGHRIPAWYHKETGEIYVDHEPPKDIENWEQDPD-VLDTWFSSALWPF 460 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL 297 +T G+ D +++P D+ V G DI+ F + + + P K V HG + Sbjct: 461 STMGWPDTESPDYKRYYPTDVLVTGYDIIFFWVSRMIFQGLEFTGKRPF-KDVLIHGLVR 519 Query: 298 H-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 +G K+SKSLGN +DP++VI++ G DALRYFL + G+D + + ++ N AN Sbjct: 520 DAQGRKMSKSLGNGVDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKVEATWN--FAN 577 Query: 357 GIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQEI 401 I N + L + GM + G T +D IL+ + ++ + Sbjct: 578 KIWN----ASRFALMNMGGMTYEELDLSGEKTVADHWILTRLNETIETV 622 Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 23/167 (13%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN + H+GHA++ + D++ R R+ G DVL+ G D G K+ + + Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLR 102 Query: 64 NAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 G++ T + ++ + + R L + D+ R T ++ R Sbjct: 103 QQGLSRYDLGREKFLEETWKWKEEYAGHIRSQWAKLGLGL-DYTRERFTLDEGLSKAVRE 161 Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G Y W + A + + VYK G Y+ ++ Sbjct: 162 VFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVVYKEVKGALYHLRY 208 >gi|49475806|ref|YP_033847.1| valyl-tRNA synthetase [Bartonella henselae str. Houston-1] gi|81647788|sp|Q6G2V3|SYV_BARHE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|49238613|emb|CAF27854.1| Valyl-tRNA synthetase [Bartonella henselae str. Houston-1] Length = 907 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 20/268 (7%) Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277 + + DP ++ W + +T G+ N A F+P L V G DI+ F W A Sbjct: 470 VNLTRDPD-VLDTWFSSALWPFSTLGW-PNKTPELATFYPTSLSVTGFDIIFF----WVA 523 Query: 278 FLLSANL------PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ L P P V+ H + KG K+SKS GN+IDP+E+I++ D+LR+ L Sbjct: 524 RMMMMGLHFMGEVPFPT-VYVHALVRDQKGAKMSKSKGNIIDPLELIDQYSADSLRFTLA 582 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 A G+D D + N A + N +R M +D A + I Sbjct: 583 IMAAQGRDVKLDPSRIAGYRN--FATKLWN-ATRFAQMNGVKHDPDFKPEKAKLALNRWI 639 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVL 448 L+ S+ + + ++N + + + + + + D Y + KP + +N D + V Sbjct: 640 LTELSKTVVAVTTGIENYKFNESASALYRFIWNTLCDWYLELLKP-IFQGSNEDAKNEVQ 698 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDI 476 T V+ ++ LL F+P + +++ + Sbjct: 699 ACTAWVLDEVYKLLHPFMPHMTEELWSL 726 >gi|222151545|ref|YP_002560701.1| valyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] gi|222120670|dbj|BAH18005.1| valyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] Length = 875 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 13/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D F+P ++ V G DI+ F W A ++ L Sbjct: 441 VLDTWFSSALWPFSTLGWPDTETIDYKTFYPTNVLVTGYDIIFF----WVARMIFQGLEF 496 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K V HG + G K+SKSLGN +DP++VI++ G D+LRYFL + G+D Sbjct: 497 TGKRPFDDVLIHGLVRAEDGRKMSKSLGNGVDPMDVIDQYGADSLRYFLATGSSPGQDLR 556 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +DE IL+ + + Sbjct: 557 YSTEKVEAAWN--FINKIWNASRFSLMNIGEDFKAEHIDLSGKKSLADEWILTRLNETIA 614 Query: 400 EI 401 ++ Sbjct: 615 DV 616 Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust. Identities = 36/166 (21%), Positives = 68/166 (40%), Gaps = 27/166 (16%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN + HIGHA++ + D++ R R+ G + L+ G D G K+ + Sbjct: 36 TIVIPPPNVTGKLHIGHAWDTTLQDIITRMKRMQGYNTLYLPGMDHAGIATQAKVEAKLR 95 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTC 106 GV+ D F + Y FIR T ++ + Sbjct: 96 EEGVSRH---DIGRTKFLEHTMEWKEEYAGFIRQQWAKLGLGLDYSRERFTLDEGLSEAV 152 Query: 107 RILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYN 151 + ++ K+ +KG IY+G W + A + + +++ +G +Y+ Sbjct: 153 KEVFVKMYEKGLIYRGERIINWDPVARTALSDIEVIHEEVEGAFYH 198 >gi|23097817|ref|NP_691283.1| isoleucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831] gi|81747084|sp|Q8ET99|SYI2_OCEIH RecName: Full=Isoleucyl-tRNA synthetase 2; AltName: Full=Isoleucine--tRNA ligase 2; Short=IleRS 2 gi|22776041|dbj|BAC12318.1| isoleucyl tRNA synthetase [Oceanobacillus iheyensis HTE831] Length = 1022 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 116/232 (50%), Gaps = 13/232 (5%) Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310 K +PAD+ + G D R F+++ + L + P K+V S G IL + G K+SKS GN Sbjct: 532 KQFPADVVIEGVDQTRGWFYSLLAVSTLFTGKTPY-KRVLSLGHILDEHGRKMSKSKGNA 590 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS-RSVSMI 369 + P+E+IEE G DALR+ L+ + + + + K + + + + + I N+ S S+ Sbjct: 591 LSPVELIEEFGADALRWALLADSSPWNNKRFSKKTV-SQAKSKVIDTILNVYSFYSMYAD 649 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF- 428 + ++ A T D ILS + V++E+ ++ I + + V E+ ++ Sbjct: 650 IDKFNVAEHATDAKTTLDSWILSRLNSVIKEVTTSLDQYDITKGARSIALFVDELSNWYV 709 Query: 429 --DAQKPWELKKTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Q+ W +A+ T L+ EV+ +L L+ ++P +A+ I+ L Sbjct: 710 RRSRQRFWSSGMNEDKKAAFTTLH---EVLSKLTQLMAPYIPFVADDIYTNL 758 Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 20/39 (51%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH GHA I D +AR+ + G VL G D HG Sbjct: 43 NGMPHAGHALGRTIKDFVARYKTMSGYQVLRKAGWDTHG 81 >gi|113476946|ref|YP_723007.1| valyl-tRNA synthetase [Trichodesmium erythraeum IMS101] gi|110167994|gb|ABG52534.1| valyl-tRNA synthetase [Trichodesmium erythraeum IMS101] Length = 911 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 33/301 (10%) Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGK 265 L +++K F +KI DP ++ W + +T G+ +N PD K++P G Sbjct: 447 LEVAKKKFGDHVKIQQDPD-VLDTWFSSSLWPFSTLGWPENTPD--LEKYYPTSTLSTGF 503 Query: 266 DILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318 DI+ F W A + L+ +P + V+ HG +L G+K SKS GN I+P+ +IE Sbjct: 504 DIIFF----WVARMTMMGVHLTGKMPF-ETVYIHGLMLDENGKKQSKSAGNGINPLLLIE 558 Query: 319 EVGVDALRYFLVREIA-CGKDGFYDKD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 + G DALRY L+RE A G+D D + + + + + N + + ++ +G Sbjct: 559 KYGTDALRYTLMRETAGAGQDVRMDYNRETDESASVEASRNFTNKIWNAARFVMMKLEGK 618 Query: 377 IPTPGAFTESDES------ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428 P E D+ ILS + +Q+ + + N + A + + D Y Sbjct: 619 TPEELGKPEVDKLELVDRWILSHFYQTVQQTCDYLDNYGLGEAAKGLYEFIWGYFCDWYL 678 Query: 429 DAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485 + K + R T+ YV ++R LL F+P + +I+ L E C Sbjct: 679 ELVKSRLQGEDENSRLVAQQTLAYVLDGILR----LLHPFMPHITEEIWHTLNQVGEENC 734 Query: 486 F 486 Sbjct: 735 L 735 >gi|302528931|ref|ZP_07281273.1| valyl-tRNA synthetase [Streptomyces sp. AA4] gi|302437826|gb|EFL09642.1| valyl-tRNA synthetase [Streptomyces sp. AA4] Length = 875 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 84/324 (25%), Positives = 133/324 (41%), Gaps = 44/324 (13%) Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------- 221 I P E +V + + D ++SR+ + WG +IP Sbjct: 388 IHPAELEKRYFDWVDN-MHDWTISRQLW-WGHRIPVWYGPDGEVVCVGPDEQPPSGEGWT 445 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--- 278 DP ++ W + ++T G+ + AKF+P + G DIL F + F Sbjct: 446 QDPD-VLDTWFSSGLWPMSTMGWPEE-TADLAKFYPTSVLSTGYDILFFWVVRMMMFGVQ 503 Query: 279 LLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337 + P V+ HG I G+K+SKS GNVIDP+E ++ G DA R+ L R G Sbjct: 504 EMDGKQPF-DHVYLHGLIRDANGKKMSKSRGNVIDPLEWMDAYGADATRFTLARGANPGA 562 Query: 338 D-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396 D D+ R + + N S+ M DG +P TESD IL + Sbjct: 563 DMALADEWAAGSR---NFCTKLWN-ASKFAMMNGATADGELPPAAELTESDRWILGRLAA 618 Query: 397 VLQEIR---ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 ++ E+ E+ Q + AL Q + D Y + K +L + + R V + Sbjct: 619 LVSEVDGLFEDFQFAKVANALYQ-FTWNELCDWYLELAKV-QLYQGDSARVEATRKVLGQ 676 Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477 V+ + LL F+P + K++ L Sbjct: 677 VLDTVLRLLHPFIPFVTEKLWTAL 700 >gi|26554335|ref|NP_758269.1| isoleucyl-tRNA synthetase [Mycoplasma penetrans HF-2] gi|81747446|sp|Q8EUN9|SYI_MYCPE RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|26454344|dbj|BAC44673.1| isoleucyl-tRNA synthetase [Mycoplasma penetrans HF-2] Length = 900 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 15/179 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 IM VW D+ T+Y + +PADL+ GKD R F++ + Sbjct: 522 IMDVWFDSGTSYSVLQ--------ADKLGYPADLYFEGKDQFRGWFNSSLITSVAAFKKS 573 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K++ +HGF+L G K+SKSLGN+IDP++V +E G D LR + V + KD K Sbjct: 574 PY-KELLTHGFVLDENGNKMSKSLGNIIDPLQVCKEYGADVLRLW-VASVDFSKDVSISK 631 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402 D + + NA+L I N + R + L ++ ++E+D +LS S ++ I+ Sbjct: 632 DIIAQ--NAELYRRIRNTLFRFILGNLNGFNLKKLRGAKYSEADLYVLSCLSNDIKTIK 688 Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 5/77 (6%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQN 64 I+ Y N H GHA I+ D++ RF G + G D HG Q++AK N Sbjct: 53 IADGPPYANGDLHTGHALNKILKDIILRFKASVGFYTKYIPGWDTHGLPIEQEMAKRGLN 112 Query: 65 AGVTTKVFVD-QNSRNF 80 + +N +NF Sbjct: 113 KNANQTITEKRKNCKNF 129 >gi|320161686|ref|YP_004174911.1| isoleucyl-tRNA synthetase [Anaerolinea thermophila UNI-1] gi|319995540|dbj|BAJ64311.1| isoleucyl-tRNA synthetase [Anaerolinea thermophila UNI-1] Length = 1051 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 127/272 (46%), Gaps = 32/272 (11%) Query: 230 VWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286 VW D+ + + Y +N D K +F PAD D R F++++ + LL + Sbjct: 523 VWFDSGSMPVAQWHYPFENQDIFKKQF-PADFICEAVDQTRGWFYSLHAISTLL-FDSEC 580 Query: 287 PKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345 K V G IL K G+K+SKS GN++DP +VI + G DA+R++L G++ Sbjct: 581 YKNVICLGLILDKNGQKMSKSRGNIVDPWDVIRQHGADAMRWYLYTATPPGQE------- 633 Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDY---------DGMIPTPGA---FTESDESILSV 393 +R +A+L +G +VS + Y DG P PGA + D +LS Sbjct: 634 --RRFSAEL---VGEVVSNFTLTLWNTYSFFVTYANLDGWKPEPGAQVQYNSLDRWLLSA 688 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV- 452 +++++ ++ + A + + V ++ ++ + K+ D Y T+ Sbjct: 689 LHALVRDVTNALETYDVLGATRPIETFVDQLSNWYLRRSRRRFWKSGSDADKKAAYATLY 748 Query: 453 EVIRQLAILLQAFVPKLANKIF-DILFVADEN 483 E + L+ LL +P LA +++ +++ DEN Sbjct: 749 EALVTLSKLLAPTMPFLAEELYQNLVRSVDEN 780 >gi|296879657|ref|ZP_06903634.1| valine--tRNA ligase [Clostridium difficile NAP07] gi|296429370|gb|EFH15240.1| valine--tRNA ligase [Clostridium difficile NAP07] Length = 834 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/257 (28%), Positives = 120/257 (46%), Gaps = 21/257 (8%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWP-AFLLSANLPL 286 W + +T G+ P+ ++A ++P + V G DI+ F + A + N Sbjct: 400 TWFSSALWPFSTLGW---PNKTEALDYYYPTSVLVTGYDIIFFWVVRMAFAGMFCMNEKP 456 Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKD 344 V HG + +G K+SKSLGN IDP+E+IE+ G DALR+ L + G D FY + Sbjct: 457 FDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADALRFTLTTGNSPGNDMRFYME- 515 Query: 345 GLKKRVNADLANGIGNLVSRSVSM-----ILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399 + + AN + N SR V M I+K+ T +D+ I+S + +++ Sbjct: 516 --RVEFARNFANKLWN-ASRFVFMNIDEDIIKNMTRE-SVKEDLTLADKWIISRANNIVK 571 Query: 400 EIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 E NM + AL ++ SE D Y + KP L + + S LY V+ + Sbjct: 572 EATNNMDKFDLGIALQKIYDFTWSEYCDWYIEMVKP-RLYGEDTNAKSAALYTLTYVLEK 630 Query: 458 LAILLQAFVPKLANKIF 474 + LL ++P + +I+ Sbjct: 631 ILKLLHPYMPFITEEIY 647 >gi|257080637|ref|ZP_05574998.1| valyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|307290155|ref|ZP_07570074.1| valyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|256988667|gb|EEU75969.1| valyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|306498783|gb|EFM68281.1| valyl-tRNA synthetase [Enterococcus faecalis TX0411] Length = 880 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 45/345 (13%) Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F ++ +K + E+ EF P R N+ + D +SR+ + WG +IP Sbjct: 363 WFVKMGPLAEKAMKNQETEDAVEFYPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419 Query: 222 -------------DDP---------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 ++P ++ W + +T G+ D +++P Sbjct: 420 WYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTS 479 Query: 260 LHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316 V G DI+ F + + + + P + V HG I +G K+SKSLGN IDP++V Sbjct: 480 TLVTGYDIIFFWVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDV 538 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 IE+ G DALR+FL A G+D + + + N N I N SR V M + +GM Sbjct: 539 IEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGM 592 Query: 377 ----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G T +D IL+ + + + E A Q+ + + + D Y + Sbjct: 593 TAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEM 652 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 K L N T + V + Q+ LL +P + +I++ Sbjct: 653 SKE-ILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|148240776|ref|YP_001226163.1| valyl-tRNA synthetase [Synechococcus sp. WH 7803] gi|147849315|emb|CAK24866.1| Valyl-tRNA synthetase [Synechococcus sp. WH 7803] Length = 914 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 27/270 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P + V G DI+ F + A + + Sbjct: 461 VLDTWFSSGLWPFSTLGWPDADSADLQRWYPTNTLVTGFDIIFFWVARMTMMAGAFTGEM 520 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYD 342 P + V+ HG + + K+SKS GN IDP+ +I+ G DALR+ LVRE+A G+D D Sbjct: 521 PF-QDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVREVAGAGQDIRLD 579 Query: 343 KD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PGAFTESDESILSVCS 395 D + + N + + L + G P P A +D ILS + Sbjct: 580 YDRKTDTSATVEASRNFANKLWNATRFALMNLGGETPAQLGDPDPAALQLADRWILSRLA 639 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST------- 446 RV +E E + + A + D Y + K ++ NP + Sbjct: 640 RVNRETAERYSSYGLGEAAKGLYEFAWNDVCDWYLELSK----RRLNPGENPSAEALADQ 695 Query: 447 --VLYVTVEVIRQLAILLQAFVPKLANKIF 474 V +VI Q+ ++L +P L +++ Sbjct: 696 RVAKQVLAKVISQMHLMLHPLMPHLTEELW 725 >gi|289643174|ref|ZP_06475302.1| Methionine--tRNA ligase [Frankia symbiont of Datisca glomerata] gi|289507005|gb|EFD27976.1| Methionine--tRNA ligase [Frankia symbiont of Datisca glomerata] Length = 685 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 105/512 (20%), Positives = 197/512 (38%), Gaps = 49/512 (9%) Query: 7 LYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 +++ + PN H+GH A + AD RF R++G TG+D+ + A+ Sbjct: 122 VFVFSTPPTPNGDLHLGHLAGPYLGADAYVRFQRMNGASAWHLTGSDDFQSYVVDRARRE 181 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKGCY 124 G ++ S + ++DI D + T + + + + ++ D G I Sbjct: 182 GRSSAEVAAHYSAEIAETLRLMDIPLDQYTVTNADPGYVPALKDFFTRLVDAGAIAPADG 241 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA------------- 171 + R Y + +V+ G G N + E L+ Sbjct: 242 PALFDPRTGQYLYEVDVHGGCPGCGEATAGNICELCGEPNTVVDLAGPVAGPSGETPVTG 301 Query: 172 -YQDKLLSYYESHPEFILPIERRNEVIS--------FVKSGLKDLSLSRKTFDWGIKIP- 221 + +L +E H + +L +RR V + + G D+ +S + DWGI IP Sbjct: 302 TARRYVLPLHE-HADAVLDHQRRGRVPARLRELAARLFRRGRIDIPVSHPS-DWGI-IPR 358 Query: 222 --DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFWPAD----LHVIGKDILRFHA 272 D +++ W + +L G D + A+ PAD +H G D +HA Sbjct: 359 EADGAGQVIWAWPEMAFGFLHGIQRFGERLGRDWTAAR--PADDWKVVHFFGYDNSFYHA 416 Query: 273 IYWPAFLLSANLPLPKKV-----FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 I +P L LP + F+L+ G K S S + + ++++ VDA+RY Sbjct: 417 ILYPVLY---RLALPGWTPDIDYHVNEFLLYDGLKFSTSRRHAVWGKQILDADSVDAVRY 473 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387 FL R + + D + + L + + YD ++P G +T Sbjct: 474 FLARNRPEVERTNFTLDAYEHTLTTTLIGTWQAWLHDLGQRVADRYDAVVPDAGNWTPEH 533 Query: 388 ESILSVCSRVLQEIRENMQNQ--LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445 L + L + ++Q +++A A++ +LV++ R+ ++ PD Sbjct: 534 AGFLGQLAARLGALAASLQPGGFSLNQAAAELDALVTDTVRFSRRERALAAAGGMPDEVR 593 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 T + + LA +P+ A ++ + L Sbjct: 594 TTTALELAAAWLLAHAATPVMPRFAARLAEAL 625 >gi|251780852|ref|ZP_04823772.1| valine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085167|gb|EES51057.1| valine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 880 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 113/236 (47%), Gaps = 31/236 (13%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLG 308 F+P ++ V G DI+ F W A ++ + L + V HG I +G K+SKSLG Sbjct: 478 FYPNNVLVTGHDIIFF----WVARMIFSGLHCMGETPFNTVLIHGLIRDSQGRKMSKSLG 533 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSV 366 N ++P++VI E G DALR+ + A G D Y +RV A + AN I N SR V Sbjct: 534 NGVNPLDVISEYGADALRFMIATGNAPGNDMRY----YPERVEASRNFANKIWN-ASRFV 588 Query: 367 SM-----ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 M I+ Y + ++ +D+ ILS + +++E+ ENM + A+ +V + Sbjct: 589 MMNLDKEIMNKYKDCV----EYSLADKWILSKMNTLVKEVTENMDKYELGIAMQKVYDFM 644 Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI-LLQAFVPKLANKIF 474 D Y + KP + ++A V Y + + + LL +P + +IF Sbjct: 645 WTEFCDWYIELVKP--VFYGEDEKAKGVAYNVLNTVLVTGLKLLHPAMPFITEEIF 698 >gi|331701260|ref|YP_004398219.1| Valyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] gi|329128603|gb|AEB73156.1| Valyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] Length = 886 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 21/200 (10%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D+ + K +++P D V G DI+ F Sbjct: 437 GMEAPKDAENWEQDPDVLDTWFSSALWPFSTMGWPDDTEDMK-RYFPTDTLVTGYDIIFF 495 Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ +L K V HG I +G K+SKSLGN IDP++VI++ G DA Sbjct: 496 ----WVSRMIFQSLEFTHERPFKDVLLHGLIRDSQGRKMSKSLGNGIDPMDVIDKYGADA 551 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAF 383 LR+FL G+D + D + N N I N SR V M L D +P + Sbjct: 552 LRWFLSIGGTPGQDLKFSYDKMDSAWN--FINKIWN-ASRYVIMNLDGIDKPELPDKSEW 608 Query: 384 TESDESILSVCSRVLQEIRE 403 SD+ ILS + + + + Sbjct: 609 QLSDKWILSRLNATVNHVSD 628 Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 23/167 (13%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S + PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 43 SIVLPPPNVTGKLHLGHAWDTTLQDMIIRRKRMQGYDTLWLPGMDHAGIATQAKVEAKLR 102 Query: 64 NAGVT-----TKVFV-------DQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 G++ + FV D +R ++ L +S D+ R T +K R Sbjct: 103 KQGISRYDLGREKFVEKVWEWKDDFARTIKEQWAKLGLSL-DYSRERFTLDKGLSKAVRK 161 Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G Y W A + + ++K G +Y+ ++ Sbjct: 162 VFVTLYNKGLIYRGEYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 208 >gi|327399172|ref|YP_004340041.1| Valyl-tRNA synthetase [Hippea maritima DSM 10411] gi|327181801|gb|AEA33982.1| Valyl-tRNA synthetase [Hippea maritima DSM 10411] Length = 873 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 75/325 (23%), Positives = 140/325 (43%), Gaps = 62/325 (19%) Query: 203 GLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDA 234 +KD +SR+ + WG +IP D+P+ ++ W + Sbjct: 394 NIKDWCISRQLW-WGHRIPVWKCEDCGKYTVSEDEPKACEHCGSDKLVQEEDVLDTWFSS 452 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV---- 290 ++T G+ + D K +F+P L V G DI+ F W A ++ L K V Sbjct: 453 ALWPMSTLGWPNQTDDLK-RFYPTSLLVTGFDIIFF----WVARMMMMGLHFMKDVPFRD 507 Query: 291 -FSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK- 347 + H + + G+K+SK+ GNVIDP+EV+E+ G D++R+ L A G+D +D ++ Sbjct: 508 VYIHALVRDQYGQKMSKTKGNVIDPLEVVEKYGADSMRFTLAILAAQGRDIKLSEDKIEG 567 Query: 348 -KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 KR + N + + M LK+ P + + I S ++ ++++ +++ Sbjct: 568 YKRFMNKIWNAYRFIKINTEGMELKE------KPKKLSPASIWIKSRLAKTIRKVEQSLS 621 Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 + A + + + D Y + K + + + ++ + +EV LL Sbjct: 622 EYKFNEAASAIYQFIWHEFCDYYIEMSKV----HMDDEFSYSIKFTLLEVFEATLRLLHP 677 Query: 465 FVP--------KLANKIFDILFVAD 481 F P KL NK D + +A+ Sbjct: 678 FTPFITEELWQKLPNKKGDSIIIAE 702 Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 S I PN HIGHA + D++ R+ R+ G +VL+ GTD G Sbjct: 36 SIVIPPPNVTGALHIGHALNGTLQDIMVRYKRMKGYNVLWVPGTDHAG 83 >gi|308125801|ref|ZP_07663528.1| methionine--tRNA ligase [Vibrio parahaemolyticus K5030] gi|308113950|gb|EFO51490.1| methionine--tRNA ligase [Vibrio parahaemolyticus K5030] Length = 364 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 11/188 (5%) Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKK 348 +F HG++ G K+SKS G + ++ + + LRY+ ++ D + + + Sbjct: 1 MFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQ 60 Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ--EIRENMQ 406 RVNAD+ N I NL SR+ I K ++G + A E ++ R+ + E RE Sbjct: 61 RVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFVAAADRIAELFEARE--- 117 Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQA 464 RA+ ++ +L + ++Y D + PW + K + V + + R L L+ Sbjct: 118 ---FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEICSVGINLFRVLMTYLKP 174 Query: 465 FVPKLANK 472 +P LA + Sbjct: 175 VMPALAAR 182 >gi|188587843|ref|YP_001921655.1| valyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] gi|188498124|gb|ACD51260.1| valyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] Length = 880 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 112/232 (48%), Gaps = 23/232 (9%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLG 308 F+P ++ V G DI+ F W A ++ + L + V HG I +G K+SKSLG Sbjct: 478 FYPNNVLVTGHDIIFF----WVARMIFSGLHCMGETPFNTVLIHGLIRDSQGRKMSKSLG 533 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSV 366 N ++P++VI E G DALR+ + A G D Y +RV A + AN I N SR V Sbjct: 534 NGVNPLDVINEYGADALRFMIATGNAPGNDMRY----YPERVEASRNFANKIWN-ASRFV 588 Query: 367 SMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423 M L K+ ++ +D+ ILS + +++E+ ENM + A+ +V + Sbjct: 589 MMNLDKEIMNKYKDCKEYSLADKWILSKMNTLVKEVTENMDKYELGIAMQKVYDFMWTEF 648 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI-LLQAFVPKLANKIF 474 D Y + KP + ++A V Y + + + LL +P + +IF Sbjct: 649 CDWYIELVKP--VFYGEDEKAKGVAYNVLNTVLVTGLKLLHPAMPFITEEIF 698 >gi|123969424|ref|YP_001010282.1| valyl-tRNA synthetase [Prochlorococcus marinus str. AS9601] gi|123199534|gb|ABM71175.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. AS9601] Length = 918 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 73/294 (24%), Positives = 136/294 (46%), Gaps = 30/294 (10%) Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269 + K F IK+ D ++ W + +T G+ + D K++P + V G DI+ Sbjct: 455 ANKKFGLNIKLVRDKD-VLDTWFSSGLWPFSTLGWPNTNDPDFKKWYPNSVLVTGFDIIF 513 Query: 270 FHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGV 322 F W A + + N+P V+ HG + +K+SKS GN IDPI +I++ G Sbjct: 514 F----WVARMTMMGNTFTNNIPF-NDVYIHGLVRDENNKKMSKSSGNGIDPILLIDKYGS 568 Query: 323 DALRYFLVREIA-CGKDGFYDKDGLKKRVNA-DLANGIGNLVSRSVSMILKDYDGMIPTP 380 DALR+ L+RE+A G+D D D K + + + N + + +L + Sbjct: 569 DALRFALIREVAGAGQDIRLDFDRKKDTSSTVEASRNFANKLWNATKFVL--INKTSNNN 626 Query: 381 GAFTESDESILSVCSR----VLQEIRENMQNQLIHRALAQVISLVSE------VDRYFD- 429 + ESDE+ L +C + L ++ + L L + L+ E D Y + Sbjct: 627 YSLNESDETSLELCDKWILSKLNQVNIKVAGLLKEYKLGESAKLLYEFTWNDFCDWYVEF 686 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 A++ + K+T + S V ++V+ + +++ F+P + +++ +L + +N Sbjct: 687 AKQRFNNKETKNRQISE--KVLIKVLNDILVMIHPFMPHITEELWHVLQLKPDN 738 Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust. Identities = 16/32 (50%), Positives = 21/32 (65%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 H+GHA+ + DV+ RF RL G +VL GTD Sbjct: 57 HMGHAFNTALIDVVVRFQRLLGKNVLCLPGTD 88 >gi|198412086|ref|XP_002127207.1| PREDICTED: similar to methionine-tRNA synthetase, partial [Ciona intestinalis] Length = 280 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 96/191 (50%), Gaps = 5/191 (2%) Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 D R++L+ G+D + + N++L N +GN ++RS+ + Y G++P P Sbjct: 2 DIWRFYLLSMRPEGQDTHFSWSDFLLKNNSELLNNLGNFINRSLKFVSNAYGGVVPDP-V 60 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNP 441 +D +L++ +R L++ +M I L +++S+ ++Y +PW+L K +N Sbjct: 61 LNNTDLELLALVNRELKDYVTDMDKLKIRDNLRRILSISRLGNQYLQENQPWKLIKGSNE 120 Query: 442 D--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499 D RASTV + + L IL+ ++P+ ++ I D L + ++ + L G + Sbjct: 121 DKSRASTVTSIAANLSCLLCILIHPYMPQTSSIIQDQLNLRGGYLIPDAITRMLPSGHKI 180 Query: 500 HKTFDPIFPRF 510 +K P+F + Sbjct: 181 NKP-SPLFRKL 190 >gi|187933633|ref|YP_001886694.1| valyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B] gi|187721786|gb|ACD23007.1| valine--tRNA ligase [Clostridium botulinum B str. Eklund 17B] Length = 880 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 112/232 (48%), Gaps = 23/232 (9%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLG 308 F+P ++ V G DI+ F W A ++ + L + V HG I +G K+SKSLG Sbjct: 478 FYPNNVLVTGHDIIFF----WVARMIFSGLHCMGETPFNTVLIHGLIRDSQGRKMSKSLG 533 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSV 366 N ++P++VI E G DALR+ + A G D Y +RV A + AN I N SR V Sbjct: 534 NGVNPLDVINEYGADALRFMIATGNAPGNDMRY----YPERVEASRNFANKIWN-ASRFV 588 Query: 367 SMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423 M L K+ ++ +D+ ILS + +++E+ ENM + A+ +V + Sbjct: 589 MMNLDKEIMNKYKDCKEYSLADKWILSKMNTLVKEVTENMDKYELGIAMQKVYDFMWTEF 648 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI-LLQAFVPKLANKIF 474 D Y + KP + ++A V Y + + + LL +P + +IF Sbjct: 649 CDWYIELVKP--VFYGEDEKAKGVAYNVLNTVLVTGLKLLHPAMPFITEEIF 698 >gi|116071913|ref|ZP_01469181.1| valyl-tRNA synthetase [Synechococcus sp. BL107] gi|116065536|gb|EAU71294.1| valyl-tRNA synthetase [Synechococcus sp. BL107] Length = 914 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 68/266 (25%), Positives = 111/266 (41%), Gaps = 19/266 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + A + + Sbjct: 461 VLDTWFSSGLWPFSTLGWPDADAPDLNRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEM 520 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYD 342 P + V+ HG + + K+SKS GN IDP+ +IE G DALR+ LVRE+A G+D D Sbjct: 521 PF-QDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALRFALVREVAGAGQDIRLD 579 Query: 343 KDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PGAFTESDESILSVCS 395 D K + + N + + L + G P A +D ILS + Sbjct: 580 YDRKKDTSATVEASRNFANKLWNATRFALMNLGGETPAQLGEPDSAALQLADRWILSRLA 639 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS-----TVL 448 RV +E + N + A + D Y + K NP A+ Sbjct: 640 RVNRETADRYSNYGLGEAAKGLYEFAWNDVCDWYLELSKRRLNPGENPSAAALADQRVAK 699 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF 474 V +VI Q+ ++L +P L +++ Sbjct: 700 QVLAKVISQMHLMLHPLMPHLTEELW 725 >gi|113954820|ref|YP_732013.1| valyl-tRNA synthetase [Synechococcus sp. CC9311] gi|113882171|gb|ABI47129.1| valyl-tRNA synthetase [Synechococcus sp. CC9311] Length = 914 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/290 (24%), Positives = 121/290 (41%), Gaps = 28/290 (9%) Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266 L+ +++ F +I D + ++ W + +T G+ D +++P + G D Sbjct: 442 LAKAQEQFGAEARIEQD-EDVLDTWFSSGLWPFSTLGWPDANAADLQRWYPTSTLITGFD 500 Query: 267 ILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323 I+ F + A + +P + V+ HG + + K+SKS GN IDP+ +IE G D Sbjct: 501 IIFFWVARMTMMAGAFTGEMPF-QDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTD 559 Query: 324 ALRYFLVREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPTP- 380 ALR+ LVRE+A G+D D D K + + N + + L + G P Sbjct: 560 ALRFALVREVAGAGQDIRLDYDRKKDTSATVEASRNFANKLWNATRFALMNLGGATPAEL 619 Query: 381 -----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP 433 A +D ILS +RV QE + + A + D Y + K Sbjct: 620 GEPEVSALRLADRWILSRLARVNQETAGRYSSYALGEAAKGLYEFAWNDVCDWYLELSK- 678 Query: 434 WELKKTNPDRAS---------TVLYVTVEVIRQLAILLQAFVPKLANKIF 474 ++ NP T V +VI Q+ ++L +P L +++ Sbjct: 679 ---RRLNPGEEPSAAALADQHTAKQVLAKVISQMHLMLHPLMPHLTEELW 725 >gi|318040771|ref|ZP_07972727.1| valyl-tRNA synthetase [Synechococcus sp. CB0101] Length = 935 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 23/275 (8%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLP 287 W + +T G+ + +++P + V G DI+ F + A + +P Sbjct: 481 TWFSSGLWPFSTLGWPNAEAADLQRWYPTSVLVTGFDIIFFWVARMTMMAGAFTGQMPF- 539 Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDG 345 + V+ HG + K+SKS GN IDP+ +I+ G DALR+ LVRE+A G+D D D Sbjct: 540 QDVYIHGLVRDENNRKMSKSAGNGIDPLLLIDRYGADALRFALVREVAGAGQDIRLDYDR 599 Query: 346 LK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PGAFTESDESILSVCSRVL 398 + + N + L + DG P P A +D ILS +RV Sbjct: 600 KSDTSATVEASRNFANKLWNVTRFALMNLDGETPASLGEPDPAALQLADRWILSRLARVN 659 Query: 399 QEIRENMQNQLIHRALAQVISLV-SEV-DRYFD-----AQKPWELKKTNPDRA----STV 447 +E E N + A + +EV D Y + Q P +L + A T Sbjct: 660 RETAERYGNYGLGEAAKGLYEFAWNEVCDWYVELIKRRLQVPADLDGAAREAALADQRTA 719 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 V + + +L ++LQ +P L +++ L A E Sbjct: 720 RQVLAKALNELLVMLQPLMPHLTEELWHGLTGAGE 754 >gi|52081291|ref|YP_080082.1| valyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52786670|ref|YP_092499.1| valyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|319647204|ref|ZP_08001426.1| valyl-tRNA synthetase [Bacillus sp. BT1B_CT2] gi|81825234|sp|Q65GK8|SYV_BACLD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|52004502|gb|AAU24444.1| valyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52349172|gb|AAU41806.1| ValS [Bacillus licheniformis ATCC 14580] gi|317390551|gb|EFV71356.1| valyl-tRNA synthetase [Bacillus sp. BT1B_CT2] Length = 880 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 69/278 (24%), Positives = 125/278 (44%), Gaps = 27/278 (9%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P+D + ++ W + +T G+ D + +++P ++ V G DI+ F Sbjct: 432 GVEAPEDAENWEQDKDVLDTWFSSALWPFSTMGWPDIDEEDFKRYYPTNVLVTGYDIIFF 491 Query: 271 --HAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + P K V HG I +G K+SKSLGN +DP++VI++ G D+LRY Sbjct: 492 WVSRMIFQGIEFTGERPF-KDVLIHGLIRDDQGRKMSKSLGNGVDPMDVIDKYGADSLRY 550 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL + G+D + + ++ N AN I N + L + DGM + G Sbjct: 551 FLATGSSPGQDLRFSFEKVESTWN--FANKIWN----ASRFALMNMDGMTYEELDLSGEK 604 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 + +D+ IL+ + ++ + + + + + + D Y + K L Sbjct: 605 SVADKWILTRLNETIETVTQLADKYEFGEVGRHLYNFIWDDFCDWYIEMAK---LPLYGE 661 Query: 442 DRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D A+ T + V+ Q LL F+P L +I+ L Sbjct: 662 DEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHL 699 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 69/171 (40%), Gaps = 21/171 (12%) Query: 5 EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-QKIAKA 61 EK + I PN + H+GHA++ + D++ R R+ G DVL+ G D G AK Sbjct: 38 EKEPYTVVIPPPNVTGKLHLGHAWDSTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAKV 97 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K D F + Y DFIR T ++ Sbjct: 98 EAKLREEGKTRYDLGREKFLEETWNWKEEYADFIRSQWAKLGLGLDYSRERFTLDEGLSK 157 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 R ++ K+ +KG IY+G Y W A + + +YK G +Y+ ++ Sbjct: 158 AVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHMRY 208 >gi|33866926|ref|NP_898485.1| valyl-tRNA synthetase [Synechococcus sp. WH 8102] gi|81573695|sp|Q7U3N4|SYV_SYNPX RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|33639527|emb|CAE08911.1| valyl-tRNA synthetase [Synechococcus sp. WH 8102] Length = 914 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/271 (26%), Positives = 114/271 (42%), Gaps = 29/271 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + A + + Sbjct: 461 VLDTWFSSGLWPFSTLGWPDAESADLQRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEM 520 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYD 342 P + V+ HG + + K+SKS GN IDP+ +I+ G DALR+ LVRE+A G+D D Sbjct: 521 PF-QDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVREVAGAGQDIRLD 579 Query: 343 KD-----GLKKRVNADLANGIGNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVC 394 D + + AN + N +R M L D P P A +D ILS Sbjct: 580 YDRKTDTSATVEASRNFANKLWN-ATRFALMNLGDETPAQLGDPDPAALQLADRWILSRL 638 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST------ 446 +RV +E E N + A + D Y + K ++ NP + Sbjct: 639 ARVNRETAERYSNYGLGEAAKGLYEFAWNDVCDWYLELSK----RRLNPGENPSAEALAD 694 Query: 447 ---VLYVTVEVIRQLAILLQAFVPKLANKIF 474 V +VI Q+ +L +P L +++ Sbjct: 695 QRVAKQVLAKVISQMHQMLHPLMPHLTEELW 725 >gi|254446147|ref|ZP_05059623.1| valyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235] gi|198260455|gb|EDY84763.1| valyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235] Length = 944 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/263 (26%), Positives = 113/263 (42%), Gaps = 40/263 (15%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL-----------------P-KKVFSHGFI 296 F+P V G DI+ F W A ++ A L L P K +F HG I Sbjct: 515 FYPTSTLVTGFDIIFF----WVARMIMAGLELYGDDKKELTDDEIAARIPFKDIFIHGLI 570 Query: 297 L-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 KG K+SK+LGN DP+++IE+ G D LR+ ++ G D + +D ++ + + + Sbjct: 571 RDEKGRKMSKTLGNSPDPLDLIEKFGADGLRFGIINIAPSGSDILFSEDRIE--IGRNFS 628 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS-----VCSRVLQEIRENMQNQLI 410 N + N + D G S L + SR+L+ +RE ++ Q Sbjct: 629 NKLWNAC--RFRQMNGPADANATLDGILDRLQTSPLDGYSNWILSRMLETMRE-IEGQFA 685 Query: 411 HRALAQVISLVSE------VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 + Q+ S + D Y +A K KK +P R + L V+ VIRQ LL Sbjct: 686 KFEMQQLTSTLYNFVWGDFCDWYVEAAKALLQKKEDP-RHNMALAVSDLVIRQALQLLHP 744 Query: 465 FVPKLANKIFDILFVADENRCFQ 487 +P + +++ + +E Q Sbjct: 745 VMPHITEELWHAMGFCEEGAFIQ 767 Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 26/183 (14%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN H+GH + + D+ R RL+G L+ GTD K+ +A + Sbjct: 74 SIMIPPPNVTGILHMGHVLDNTLQDIFIRRARLEGKSTLWFPGTDHASIATQTKVEQALR 133 Query: 64 NAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHHDTCRI 108 G + + + D + + L S D+ RTT ++ + + R Sbjct: 134 AEGTSRREVGREKFLERAWQWSDDHGGKILNQLKKLGASC-DWRRTTFTMDESYERSVRA 192 Query: 109 LWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167 + K+ D+G IY+G W A N++ + K G+++ ++ V EE G F Sbjct: 193 AFVKLYDRGYIYRGKRLVNWCPSSQTALSNEEVIMKPQKGKFWKMRYELV---EEPGRFI 249 Query: 168 RLS 170 +S Sbjct: 250 EIS 252 >gi|198282759|ref|YP_002219080.1| leucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667702|ref|YP_002424955.1| leucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247280|gb|ACH82873.1| leucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519915|gb|ACK80501.1| leucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 821 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 22/200 (11%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K Y YP+ Q H+GH IAD +AR+ R+ G +V+ G D G AA Sbjct: 34 DKFYALAMFPYPSGQLHMGHVRNYSIADAIARYQRMLGKEVMQPMGWDAFGLPAENAALK 93 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC--------RILWKKISDK 116 G+ + N + R L +SYD R TC + L+ K+ +K Sbjct: 94 HGLAPAQWTMDNIAHMRGQLQRLGLSYD------WSREFATCTPDYYRWEQWLFVKLWEK 147 Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 G +Y+ + + D+ +++V G G A PV+ E YF R++AY ++L Sbjct: 148 GLVYQKLSTVNWDPVDQTVLANEQVVDGC-GWRSGA---PVERKEIVQYFLRITAYAEEL 203 Query: 177 L----SYYESHPEFILPIER 192 L + E PE +L ++R Sbjct: 204 LTGLDTLGEGWPEQVLTMQR 223 Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 11/93 (11%) Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAF--LLSANLPLP---------KKVFSHGFIL 297 D A + P D +V G + H +Y F LL LP + + + G +L Sbjct: 518 DQRAADWLPVDQYVGGVEHAVLHLLYARFFNRLLRDVGLLPADGAHDEPFRHLLTQGMVL 577 Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 G K+SKS GN +DP +I+ G D R F++ Sbjct: 578 KDGSKMSKSKGNTVDPQGLIDRYGADTARLFIL 610 >gi|326803842|ref|YP_004321660.1| valine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a] gi|326650187|gb|AEA00370.1| valine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a] Length = 881 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 72/276 (26%), Positives = 120/276 (43%), Gaps = 29/276 (10%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P+D + ++ W + +T G+ D +++P D V G DI+ F Sbjct: 431 GMEAPEDEENWVQDPDVLDTWFSSALWPFSTMGWPDEEASDYKRYFPTDTLVTGYDIIFF 490 Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ +L K V HG I +G K+SKSLGN +DP++V+++ G DA Sbjct: 491 ----WVSRMIFQSLEFTGERPFKNVLIHGLIRDSQGRKMSKSLGNGVDPMDVVDQYGADA 546 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380 LR+FL G+D Y + L+ N N I N SR M L DGM I Sbjct: 547 LRWFLATGSTPGQDIRYYPEKLEAAWN--FINKIWN-ASRYALMNL---DGMTYDDIDLN 600 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438 + D+ IL+ + + ++ + A + + D Y + K L+ Sbjct: 601 NVTSIVDQWILTRLNETIAKVTDRFDAFEFGEAGRALYHFIWNDFCDWYIEMSKE-VLQG 659 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + D T V V+ Q+ LL +P + +I+ Sbjct: 660 DDEDAKHTTRSVLSYVLGQMLALLHPIMPFVTEEIW 695 Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 46/179 (25%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA+++ + D++ R R+ G D L+ G D +AG+ Sbjct: 41 SVVIPPPNVTGKLHLGHAWDVTLQDMIVRQKRMQGYDTLWLPGMD-----------HAGI 89 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHHDTCRILWKKIS---------- 114 T+ V++ R +++ D+ + FI T ++ + T R W K+ Sbjct: 90 ATQAKVEEKLRKEENLSR-YDLGREKFIDKTWEWKEEYAQTIRNQWAKMGISVDYKRERF 148 Query: 115 ------------------DKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 +KG IY+G Y W + A + + VYK G +Y+ ++ Sbjct: 149 TLDDGLSEAVRKVFVTLYEKGLIYRGEYIINWDPVFQTALSDIEVVYKDDKGAFYHLEY 207 >gi|296331993|ref|ZP_06874457.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675613|ref|YP_003867285.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] gi|296150764|gb|EFG91649.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413857|gb|ADM38976.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] Length = 804 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 11/196 (5%) Query: 3 EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 E++K Y YP+ A H+GH D+L+R R+ G DVL G D G + Sbjct: 29 EKQKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQY 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G VF QN NFR L SY D I TT+ ++ + ++ K+ +KG Sbjct: 89 ALDTGNDPAVFTKQNIDNFRRQIQSLGFSYDWDREINTTDPEYYKWTQWIFLKLYEKGLA 148 Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 Y W N++ + DG+ H PV+ + + +++AY D+LL Sbjct: 149 YVDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLLE 203 Query: 179 YYES--HPEFILPIER 192 E PE I ++R Sbjct: 204 DLEELDWPESIKDMQR 219 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 35/155 (22%) Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISK 305 K+ P D+++ G + H +Y W FL + K K+++ G IL EK+SK Sbjct: 520 KWLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSK 579 Query: 306 SLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKK----------- 348 S GNV++P E++ G D LR + L IA + G DG ++ Sbjct: 580 SKGNVVNPDEIVASHGADTLRLYEMFMGPLDASIAWSESGL---DGARRFLDRVWRLFVE 636 Query: 349 ---RVNADLANGIGNLVSR----SVSMILKDYDGM 376 +N + G G + R +V + Y+G+ Sbjct: 637 DSGELNGKIVEGAGETLERVYHETVMKVTDHYEGL 671 >gi|240850847|ref|YP_002972247.1| valyl-tRNA synthetase ValS [Bartonella grahamii as4aup] gi|240267970|gb|ACS51558.1| valyl-tRNA synthetase ValS [Bartonella grahamii as4aup] Length = 907 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/268 (24%), Positives = 118/268 (44%), Gaps = 23/268 (8%) Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277 I+ PD ++ W + +T G+ N + F+P+ L V G DI+ +W A Sbjct: 473 IRDPD----VLDTWFSSALWPFSTLGW-PNKTTELSTFYPSSLSVTGFDII----FFWVA 523 Query: 278 FLLSANL------PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 ++ L P P V+ H + KG K+SKS GN+IDP+E+I++ DALR+ L Sbjct: 524 RMMMMGLHFMGDVPFPT-VYVHALVRDQKGAKMSKSKGNIIDPLELIDQYSADALRFTLA 582 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 A G+D D + N A + N +R M +D A + I Sbjct: 583 IMAAQGRDVKLDASRIAGYRN--FATKLWN-ATRFAQMNGVKHDPTFKPEQAKLALNRWI 639 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVL 448 L+ S+ + + +++ + + A + + + D Y + KP + N D + Sbjct: 640 LTELSKTISAVTTGIEHYKFNESAATLYRFIWNTLCDWYLELLKP-IFQGENEDAKNEAQ 698 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDI 476 T V+ ++ LL F+P + +++ + Sbjct: 699 ACTAWVLDEVYKLLHPFMPHMTEELWSL 726 >gi|227518203|ref|ZP_03948252.1| valyl-tRNA synthetase [Enterococcus faecalis TX0104] gi|227074359|gb|EEI12322.1| valyl-tRNA synthetase [Enterococcus faecalis TX0104] Length = 880 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P V G DI+ F Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIFF 490 Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 + + + + P + V HG I +G K+SKSLGN IDP++VIE+ G DALR+ Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383 FL A G+D + + + N N I N SR V M + +GM I G Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441 T +D IL+ + + + E A Q+ + + + D Y + K L N Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGDNE 662 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 T + V + Q+ LL +P + +I++ Sbjct: 663 VAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 GV+ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGVSRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|329724727|gb|EGG61233.1| valine--tRNA ligase [Staphylococcus epidermidis VCU144] Length = 876 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 18/261 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDTNADDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNAARFSLMNIGEDFKVEDIDLSGNLSLADQWILTRLNETIS 616 Query: 400 ---EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 E+ + + + RAL I D Y + K + + + T V V+ Sbjct: 617 TVTELSDKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNGEDESQKQTTRSVLSYVLD 674 Query: 457 QLAILLQAFVPKLANKIFDIL 477 ++ +L F+P + I+ L Sbjct: 675 KIMKMLHPFMPFVTETIWQSL 695 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G IA Sbjct: 30 EDKSKEAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAG--IA 87 Query: 60 KAAQ 63 A+ Sbjct: 88 TQAK 91 >gi|40063564|gb|AAR38353.1| valyl-tRNA synthetase [uncultured marine bacterium 582] Length = 965 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 12/126 (9%) Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276 G+K+ DP ++ W + + T G+ D D + K++P D+ + G+DIL F W Sbjct: 527 GVKLTRDPD-VLDTWFSSGLWPIGTLGWPDQTDALE-KYFPTDVLITGQDILFF----WV 580 Query: 277 AFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 A ++ + K H LH KG K+SK+ GNVIDP+E+++E G DALR+ + Sbjct: 581 ARMMMMQQAVVDKDPFHTVYLHQLVRDEKGHKMSKTKGNVIDPLEIVDEFGADALRFTMT 640 Query: 331 REIACG 336 + A G Sbjct: 641 QMAAIG 646 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 6/64 (9%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 H+GHA+ + DVL R+HR+ G D L+ G D G IA Q K+ Q Sbjct: 52 HVGHAFNNTLQDVLTRWHRMRGFDTLWQPGQDHAG--IATQLQ----VEKMLAGQGQPGR 105 Query: 81 RDMA 84 RD+ Sbjct: 106 RDLG 109 >gi|148265162|ref|YP_001231868.1| leucyl-tRNA synthetase [Geobacter uraniireducens Rf4] gi|189030266|sp|A5G677|SYL_GEOUR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|146398662|gb|ABQ27295.1| leucyl-tRNA synthetase [Geobacter uraniireducens Rf4] Length = 824 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 11/197 (5%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K REK Y+ YP+ + H+GH I DV+ARF R+ G +VL G D G A Sbjct: 30 KTREKYYLLEMFPYPSGRIHMGHVRNYSIGDVIARFKRMKGFNVLHPMGWDAFGMPAENA 89 Query: 62 A-QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118 A QN K + +N R + +SY D + T + ++ ++++ ++ KG Sbjct: 90 AIQNKSHPAK-WTYENIAYMRGQLKKMGLSYDWDRELATCDVDYYKWEQLIFLQMYKKGL 148 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 YK S + + E +++V DG + N V E E + FR++ Y ++LL Sbjct: 149 AYKKISSVNWCPKCETVLANEQV---EDGCCWRCDSN-VDQKELEQWSFRITDYAEELLE 204 Query: 179 Y---YESHPEFILPIER 192 Y PE +L ++R Sbjct: 205 YTYKLPGWPERVLTMQR 221 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 24/209 (11%) Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 + + G ++ G K+SKS GNV+DP +I++ G D R F + KD + G+ Sbjct: 569 LLTQGMVIKDGAKMSKSKGNVVDPNALIDKYGADTARLFSLFAAPPEKDLDWSDQGVDGS 628 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 N + LV ++ +I G + P T + + + ++++ E+++ + Sbjct: 629 FR--FLNRVWKLVYDTLPII--GGAGAL-DPAGLTNEGKGLRRQVHKTIRKVTEDIEERF 683 Query: 410 -IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468 + A+A + LV+ + + +P K +P A V E I + +LL FVP Sbjct: 684 HFNTAIAATMELVNTIQSF----EP----KNSPQNAP----VLKEAIESVVMLLAPFVPH 731 Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGF 497 +++ L N+ SL+Q P F Sbjct: 732 FTEELWAQL---GNNK---SLEQAGWPAF 754 >gi|171910094|ref|ZP_02925564.1| valyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136] Length = 887 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 77/302 (25%), Positives = 131/302 (43%), Gaps = 41/302 (13%) Query: 202 SGLKDLSLSRKTFDWGIKIP------------DDPQY--------IMYVWIDALTNYLTT 241 G++D +SR+ + WG ++P P+ ++ W + T Sbjct: 405 GGIQDWCISRQIW-WGHRVPVWYREGEVYCGETAPEGDGWTQDADVLDTWFSSWLWPFAT 463 Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGF 295 G+ + KA F+P V G DI+ +W A ++ A +P K V+ G Sbjct: 464 MGWPKETNDLKA-FYPTTDLVTGPDII----FFWVARMIMAGYEWMGEMPF-KNVYFTGI 517 Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 I K G K+SKSLGN DP+E+I + G DALR+ ++R G D +D+ ++ + + Sbjct: 518 IRDKQGRKMSKSLGNSPDPLELISKFGADALRFGIMRSAPLGADVLFDEKNVE--LGRNF 575 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 + N +R M +G I P + D+ IL+ S +QE+ ++ A Sbjct: 576 CTKLWN-AARFRQMQGGASEGEI-KPELLSSDDKWILARLSDAIQEVTTALEEYRFSDAA 633 Query: 415 AQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 A + SE D Y +A K L ++ R + L V V+ L F+P + + Sbjct: 634 ATLYRFFWSEYCDWYVEATKA-VLNGSDEARKANTLAVMDFVLGHTLRLFHPFLPFITEE 692 Query: 473 IF 474 ++ Sbjct: 693 LW 694 >gi|157414288|ref|YP_001485154.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] gi|157388863|gb|ABV51568.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] Length = 915 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 74/297 (24%), Positives = 137/297 (46%), Gaps = 30/297 (10%) Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269 + K F IK+ D ++ W + +T G+ + D K++P + V G DI+ Sbjct: 452 ANKKFGLNIKLVRDKD-VLDTWFSSGLWPFSTLGWPNINDPDFKKWYPNSVLVTGFDIIF 510 Query: 270 FHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGV 322 F W A + + N+P K V+ HG + +K+SKS GN IDPI +I++ G Sbjct: 511 F----WVARMTMMGNTFTNNIPF-KDVYIHGLVRDENNKKMSKSSGNGIDPILLIDKYGS 565 Query: 323 DALRYFLVREIA-CGKDGFYDKDGLKKRVNA-DLANGIGNLVSRSVSMILKDYDGMIPTP 380 DALR+ L+RE+A G+D D D K + + + N + + +L + Sbjct: 566 DALRFALIREVAGAGQDIRLDFDRKKDTSSTVEASRNFANKLWNATKFVL--INKTSNNN 623 Query: 381 GAFTESDESILSVCSR----VLQEIRENMQNQLIHRALAQVISLVSE------VDRYFD- 429 + ESD++ L +C + L +I + L L + L+ E D Y + Sbjct: 624 YSLNESDKTSLELCDKWILSKLNQINIKVAAMLKEYKLGESAKLLYEFTWNDFCDWYVEF 683 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 A++ + K+T + S V ++V+ + +++ F+P + +++ +L + +N Sbjct: 684 AKQRFNNKETKNRQISE--KVLIKVLNDILVMIHPFMPHITEELWHVLQLKPDNELL 738 >gi|73662410|ref|YP_301191.1| valyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|90108439|sp|Q49Y96|SYV_STAS1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|72494925|dbj|BAE18246.1| valyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 876 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 13/184 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDVEADDFQRYFPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TGKRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ + G + +D+ IL+ + ++ Sbjct: 559 YSTEKVESIWN--FINKIWNAARFSIMNIGEDFTVEQVDLSGDLSLADKWILTRLNETIE 616 Query: 400 EIRE 403 + E Sbjct: 617 NVTE 620 Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust. Identities = 37/169 (21%), Positives = 70/169 (41%), Gaps = 27/169 (15%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN + H+GHA++ + D+L R R+ G D L+ G D G K+ Sbjct: 38 TIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYDTLYLPGMDHAGIATQAKVEAKLN 97 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTC 106 G++ D F + A Y +FIR T ++ Sbjct: 98 EQGLSRH---DLGREKFLEQAWDWKEEYANFIRQQWAKLGLGLDYSRERFTLDEGLSKAV 154 Query: 107 RILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + ++ + +KG IY+G Y W + A + + +++ G++Y+ ++ Sbjct: 155 KKVFVDMYNKGLIYRGEYIINWDPIARTALSDIEVIHEDVQGKFYHFKY 203 >gi|237742952|ref|ZP_04573433.1| valyl-tRNA synthetase [Fusobacterium sp. 4_1_13] gi|229430600|gb|EEO40812.1| valyl-tRNA synthetase [Fusobacterium sp. 4_1_13] Length = 887 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 128/273 (46%), Gaps = 18/273 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ P+ +K F+P V G DI+ F F + Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELDLFYPTSTLVTGADIIFFWVARMIMFGMYELK 508 Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 +P K VF HG + + G K+SKSLGN DP+++I+E GVDA+R+ ++ + G+D + Sbjct: 509 KIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQGQDVHFS 568 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400 D L + + AN I N +R V M L+ +D + T + D+ I+S + ++ Sbjct: 569 TDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISRLNETAKD 625 Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL---YVTVEVI 455 +++ ++ + A V + D Y + K L + D+ + L Y+ V+ Sbjct: 626 VKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLTAQYMLWTVL 684 Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQS 488 Q LL F+P + +I+ + V + Q+ Sbjct: 685 EQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQA 717 >gi|212638460|ref|YP_002314980.1| valyl-tRNA synthetase [Anoxybacillus flavithermus WK1] gi|254783550|sp|B7GH39|SYV_ANOFW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|212559940|gb|ACJ32995.1| Valyl-tRNA synthetase [Anoxybacillus flavithermus WK1] Length = 875 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 31/196 (15%) Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240 ++D +SR+ + WG +IP + Q ++ W + + Sbjct: 398 IRDWCISRQLW-WGHRIPAWYHKETGEVYVDHEPPADIENWEQDQDVLDTWFSSALWPFS 456 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILH 298 T G+ D +++P D+ V G DI+ F + + A + P K V HG + Sbjct: 457 TMGWPDKTSADYNRYYPTDVLVTGYDIIFFWVSRMIFQALEFTGKRPF-KDVLIHGLVRD 515 Query: 299 -KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 +G K+SKSLGN +DP++VI++ G D+LRYFL + G+D + + ++ N N Sbjct: 516 AQGRKMSKSLGNGVDPMDVIDQYGADSLRYFLATGSSPGQDLRFSTEKVEATWN--FVNK 573 Query: 358 IGNLVSRSVSMILKDY 373 I N SR M ++ + Sbjct: 574 IWN-ASRFALMNMEGF 588 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 21/166 (12%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN + H+GHA++ + D++ R R+ G DVL+ G D G K+ + + Sbjct: 38 TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLR 97 Query: 64 NAGVT-----TKVFVDQNSRNFRDMADVLDISYD------DFIR---TTEKRHHDTCRIL 109 N G T + FV++ + + A + + D+ R T ++ R + Sbjct: 98 NEGKTRYDLGREKFVEETWKWKEEYAGHIRSQWAKLGLGLDYTRERFTLDEGLSKAVREV 157 Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + + KG IY+G Y W + A + + VYK G Y+ ++ Sbjct: 158 FVSLYKKGLIYRGEYIINWDPVTKTALSDIEVVYKDVQGALYHMRY 203 >gi|27468257|ref|NP_764894.1| valyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228] gi|57867133|ref|YP_188802.1| valyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|282875919|ref|ZP_06284786.1| valine--tRNA ligase [Staphylococcus epidermidis SK135] gi|293366387|ref|ZP_06613066.1| valine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|81819377|sp|Q5HNN9|SYV_STAEQ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|81843675|sp|Q8CS83|SYV_STAES RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|27315803|gb|AAO04938.1|AE016748_172 valine-tRNA ligase [Staphylococcus epidermidis ATCC 12228] gi|57637791|gb|AAW54579.1| valyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|281294944|gb|EFA87471.1| valine--tRNA ligase [Staphylococcus epidermidis SK135] gi|291319512|gb|EFE59879.1| valine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|329733785|gb|EGG70111.1| valine--tRNA ligase [Staphylococcus epidermidis VCU045] gi|329737114|gb|EGG73368.1| valine--tRNA ligase [Staphylococcus epidermidis VCU028] Length = 876 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 18/261 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDTNADDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNAARFSLMNIGEDFKVEDIDLSGNLSLADQWILTRLNETIS 616 Query: 400 ---EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 E+ + + + RAL I D Y + K + + + T V V+ Sbjct: 617 TVTELSDKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNGEDESQKQTTRSVLSYVLD 674 Query: 457 QLAILLQAFVPKLANKIFDIL 477 ++ +L F+P + I+ L Sbjct: 675 KIMKMLHPFMPFVTETIWQSL 695 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 30 EDKSKEAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAG 85 >gi|317495673|ref|ZP_07954038.1| valyl-tRNA synthetase [Gemella moribillum M424] gi|316914126|gb|EFV35607.1| valyl-tRNA synthetase [Gemella moribillum M424] Length = 880 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 14/181 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W A ++ L Sbjct: 446 VLDTWYSSALFPFSTLGWPDLESEDFKRYYPNSCLVTGYDIIFF----WVARMVFQGLEF 501 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + HG + +G K+SKSLGN +DP+EVIE+ G D+LRYFL G+D Sbjct: 502 TGTRPFEDCLIHGLVRDEQGRKMSKSLGNGVDPMEVIEQYGADSLRYFLATNSTPGQDLR 561 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N SR V M L+ ++ I G T +D+ IL+ ++ ++ Sbjct: 562 YSTEKIEASWN--YINKIWN-ASRFVIMNLEGFEYSDIDLSGEKTLADKYILTKLAKTIE 618 Query: 400 E 400 + Sbjct: 619 D 619 Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + HIGHA++ + D+L R+ RL G DVL+ G D +AG+ Sbjct: 39 TIVIPPPNVTGKLHIGHAWDTTLQDMLTRYKRLKGFDVLYLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSR 78 +T+ V+ R Sbjct: 88 STQAKVEAKMR 98 >gi|300214744|gb|ADJ79160.1| Valyl-tRNA synthetase [Lactobacillus salivarius CECT 5713] Length = 886 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W + ++ ++ Sbjct: 452 VLDTWFSSALWSFSTMGWPDTESPDFKRYFPTNTLVTGYDIIFF----WVSRMIFQSVEF 507 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K+ V HG I +G K+SKSLGN IDP++VI++ G DALR+FL A G+D Sbjct: 508 TKRRPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVR 567 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQ 399 + + N N I N SR V M L D + +P + +D+ ILS + ++ Sbjct: 568 FSYTKMDAAWN--FINKIWN-ASRFVIMNLDSDVELSLPEASEWQLADKWILSRLNDTVR 624 Query: 400 EI 401 ++ Sbjct: 625 DV 626 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 21/174 (12%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55 +++E S I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 34 EDKEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQ 93 Query: 56 QKIAKAAQNAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKR 101 K+ G++ + FV++ + AD+ L + YD T + Sbjct: 94 AKVEARLAEDGISRYDLGREKFVEKVWEWKGEYADIIHQQWAKLGLSLDYDRERFTLDDG 153 Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 R ++ + KG IY+G Y + + +D EV +K G +Y+ ++ Sbjct: 154 LSKAVRKVFVTLYKKGLIYRGEYIINWDPKARTALSDIEVIHKDDKGAFYHVKY 207 >gi|261418346|ref|YP_003252028.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|319767695|ref|YP_004133196.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC52] gi|261374803|gb|ACX77546.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|317112561|gb|ADU95053.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC52] Length = 880 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 47/309 (15%) Query: 204 LKDLSLSRKTFDWGIKIP------------------------DDPQYIMYVWIDALTNYL 239 ++D +SR+ + WG +IP DP ++ W + Sbjct: 403 IRDWCISRQLW-WGHRIPAWYHKETGEIYVDHEPPADIENWEQDPD-VLDTWFSSALWPF 460 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL 297 +T G+ D +++P D+ V G DI+ F + + + P K V HG + Sbjct: 461 STMGWPDVESPDYKRYYPTDVLVTGYDIIFFWVSRMIFQGLEFTGKRPF-KDVLIHGLVR 519 Query: 298 H-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 +G K+SKSLGN +DP++VI++ G DALRYFL + G+D + + ++ N AN Sbjct: 520 DAQGRKMSKSLGNGVDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKVEATWN--FAN 577 Query: 357 GIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 I N + L + GM + G T +D IL+ + ++ + + + Sbjct: 578 KIWN----ASRFALMNMGGMTYEELDLSGEKTVADHWILTRLNETIETVTKLAEKYEFGE 633 Query: 413 ALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPK 468 A + + + + D Y + K L D A+ T V V+ LL F+P Sbjct: 634 AGRTLYNFIWDDLCDWYIEMAK---LPLYGDDEAAKKTTRSVLAYVLDNTMRLLHPFMPF 690 Query: 469 LANKIFDIL 477 + +I+ L Sbjct: 691 ITEEIWQNL 699 Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 23/167 (13%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN + H+GHA++ + D++ R R+ G DVL+ G D G K+ + + Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLR 102 Query: 64 NAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 G++ T + ++ + + R L + D+ R T ++ R Sbjct: 103 QQGLSRYDLGREKFLEETWKWKEEYAGHIRSQWAKLGLGL-DYTRERFTLDEGLSKAVRE 161 Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G Y W + A + + VYK G Y+ ++ Sbjct: 162 VFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVVYKEVKGALYHLRY 208 >gi|319400980|gb|EFV89199.1| valyl-tRNA synthetase [Staphylococcus epidermidis FRI909] Length = 876 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 18/261 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDTNADDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNAARFSLMNIGEDFKVEDIDLSGNLSLADQWILTRLNETIS 616 Query: 400 ---EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 E+ + + + RAL I D Y + K + + + T V V+ Sbjct: 617 TVTELSDKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNDEDESQKQTTRSVLSYVLD 674 Query: 457 QLAILLQAFVPKLANKIFDIL 477 ++ +L F+P + I+ L Sbjct: 675 KIMKMLHPFMPFVTETIWQSL 695 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G IA Sbjct: 30 EDKSKEAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAG--IA 87 Query: 60 KAAQ 63 A+ Sbjct: 88 TQAK 91 >gi|241889659|ref|ZP_04776957.1| valyl-tRNA synthetase [Gemella haemolysans ATCC 10379] gi|241863281|gb|EER67665.1| valyl-tRNA synthetase [Gemella haemolysans ATCC 10379] Length = 880 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 14/181 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W A ++ L Sbjct: 446 VLDTWYSSALFPFSTLGWPDLESEDFKRYYPNSCLVTGYDIIFF----WVARMVFQGLEF 501 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + HG + +G K+SKSLGN +DP+EVIE+ G D+LRYFL G+D Sbjct: 502 TGTRPFEDCLIHGLVRDEQGRKMSKSLGNGVDPMEVIEQYGADSLRYFLATNSTPGQDLR 561 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N SR V M L+ ++ I G T +D+ IL+ ++ ++ Sbjct: 562 YSTEKIEASWN--YINKIWN-ASRFVIMNLEGFEYSDIDLTGEKTLADKYILTKLAKTIE 618 Query: 400 E 400 + Sbjct: 619 D 619 Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + HIGHA++ + D+L R+ RL G DVL+ G D +AG+ Sbjct: 39 TIVIPPPNVTGKLHIGHAWDTTLQDMLTRYKRLKGFDVLYLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSR 78 +T+ V+ R Sbjct: 88 STQAKVEAKMR 98 >gi|221633223|ref|YP_002522448.1| leucyl-tRNA synthetase [Thermomicrobium roseum DSM 5159] gi|221155678|gb|ACM04805.1| leucyl-tRNA synthetase [Thermomicrobium roseum DSM 5159] Length = 829 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 37/240 (15%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHK- 299 D K +W P D + G + H +Y W L L + ++F+HG IL + Sbjct: 528 DPEKVAYWTPVDQYTGGIEHAILHLLYSRFWTKALADLGLVNHREPFLRLFNHGVILGED 587 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 GEK+SKS GNV+DP +++ +G D +R +L+ + G + G+ G+ Sbjct: 588 GEKMSKSRGNVVDPDDLVARLGADTVRLYLMFIGPWSQGGPWSSRGVA---------GVQ 638 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 + R +++ + D +P A E ++ + R ++ + ++ + + A+A+++ Sbjct: 639 RFLQRVWALVTETLD--VPVDTAEDEQARALRRLVHRTIKHVTDDFETFSFNTAIARMME 696 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV--EVIRQLAILLQAFVPKLANKIFDIL 477 LV+E+ R R +TV+ + V E + L +LL P LA +++ L Sbjct: 697 LVNELSRL---------------RETTVVRMPVWREALETLVLLLAPGAPHLAEELWQRL 741 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 11/194 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K Y YP+ HIGH + AD AR+ R+ G +VLF G D G AA Sbjct: 41 RPKWYHLVMFPYPSGNLHIGHWFSYAPADAAARYKRMRGYNVLFPFGFDAFGLPAENAAI 100 Query: 64 NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 G+ +V+ QN + R + + D S + + T ++ + + + +G Sbjct: 101 KHGIHPRVWTMQNIAHMKKQLRSLGGMFDWSKE--VITCLPEYYRWNQWFFLQFYKRGLA 158 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 Y+ W+ + +++V G + + + E +F R++AY ++LL + Sbjct: 159 YRAKAPVWWCPTCQTVLANEQVIDGRCERCSTEVYR----RDLEQWFLRITAYAEELLRF 214 Query: 180 YE-SHPEFILPIER 192 PE ++ ++R Sbjct: 215 DGIDWPERVITMQR 228 >gi|135181|sp|P11931|SYV_BACST RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|143797|gb|AAA22879.1| valyl-tRNA synthetase [Geobacillus stearothermophilus] Length = 880 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 15/186 (8%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLL 280 DP ++ W + +T G+ D +++P D+ V G DI+ F + + Sbjct: 445 DPD-VLDTWFSSALWPFSTMGWPDTDSPDYKRYYPTDVLVTGYDIIFFWVSRMIFQGLEF 503 Query: 281 SANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 + P K V HG + +G K+SKSLGN +DP++VI++ G DALRYFL + G+D Sbjct: 504 TGKRPF-KDVLIHGLVRDAQGRKMSKSLGNGVDPMDVIDQYGADALRYFLATGSSPGQDL 562 Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCS 395 + + ++ N AN I N + L + GM + G T +D IL+ + Sbjct: 563 RFSTEKVEATWN--FANKIWN----ASRFALMNMGGMTYEELDLSGEKTVADHWILTRLN 616 Query: 396 RVLQEI 401 ++ + Sbjct: 617 ETIETV 622 Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 23/167 (13%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN + H+GHA++ + D++ R R+ G DVL+ G D G K+ + + Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLR 102 Query: 64 NAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 G++ T + ++ + + R L + D+ R T ++ R Sbjct: 103 QQGLSRYDLGREKFLEETWKWKEEYAGHIRSQWAKLGLGL-DYTRERFTLDEGLSKAVRE 161 Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G Y W + A + + VYK G Y+ ++ Sbjct: 162 VFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVVYKEVKGALYHMRY 208 >gi|146279117|ref|YP_001169276.1| valyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025] gi|145557358|gb|ABP71971.1| valyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025] Length = 987 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 35/192 (18%) Query: 167 FRLSAYQDKLLSYYESHPE-----FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221 F A +K L S P ++ + R E + + L D ++S Sbjct: 494 FDFDAVSEKFLDDLASLPAPLNHARVVEVANRAEAVDRLAQALADYNVS----------- 542 Query: 222 DDPQYIMY-VWIDA------LTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHA 272 +DP +++Y VW D ++ L G L P+ + +++P ++ + G DI+ Sbjct: 543 EDPTHLVYPVWRDPDVLDTWFSSGLWPIGTLGWPEDTDELRRYFPTNVLITGFDII---- 598 Query: 273 IYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALR 326 +W A ++ L + K V+ H + KG+K+SKSLGNV+DP+E+I+E G DA+R Sbjct: 599 FFWVARMMMMQLAVVNEVPFKTVYVHALVRDEKGKKMSKSLGNVLDPLELIDEFGADAVR 658 Query: 327 YFLVREIACGKD 338 + L A G+D Sbjct: 659 FTLTAMAAMGRD 670 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 8/51 (15%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQ 63 H+GHA+ + D+L R+HR+ G D L+ G D G +++AKA Q Sbjct: 52 HMGHAFNNTLQDILTRWHRMRGFDTLWQPGQDHAGIATQMVVERELAKAGQ 102 >gi|329767449|ref|ZP_08258974.1| valyl-tRNA synthetase [Gemella haemolysans M341] gi|328836138|gb|EGF85829.1| valyl-tRNA synthetase [Gemella haemolysans M341] Length = 880 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 14/181 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W A ++ L Sbjct: 446 VLDTWYSSALFPFSTLGWPDLESEDFKRYYPNSCLVTGYDIIFF----WVARMVFQGLEF 501 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + HG + +G K+SKSLGN +DP+EVIE+ G D+LRYFL G+D Sbjct: 502 TGTRPFEDCLIHGLVRDEQGRKMSKSLGNGVDPMEVIEQYGADSLRYFLATNSTPGQDLR 561 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N SR V M L+ ++ I G T +D+ IL+ ++ ++ Sbjct: 562 YSTEKIEASWN--YINKIWN-ASRFVIMNLEGFEYSDIDLTGEKTLADKYILTKLAKTIE 618 Query: 400 E 400 + Sbjct: 619 D 619 Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + HIGHA++ + D+L R+ RL G DVL+ G D +AG+ Sbjct: 39 TIVIPPPNVTGKLHIGHAWDTTLQDMLTRYKRLKGFDVLYLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSR 78 +T+ V+ R Sbjct: 88 STQAKVEAKMR 98 >gi|310777973|ref|YP_003966306.1| leucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] gi|309747296|gb|ADO81958.1| leucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] Length = 869 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 8/185 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E Y+ + YP+ + H+GH I DV+AR+ ++ G +VL G D G AA Sbjct: 32 KENYYVLEMLPYPSGKLHMGHVRNYTIGDVIARYKKMKGYNVLHPMGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G V+ N N L SY D I + ++ + ++K++ +KG +YK Sbjct: 92 QNGAHPAVWTKSNIENMTTQLKSLGFSYDWDREIASYRDDYYRWNQWIFKRMYEKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 S + + +++V DG+ + V E E ++F+++ Y D+LL E Sbjct: 152 KKSSVNWCPDCQTVLANEQV---EDGKCWRHSKTDVIQKELEQWYFKITNYADELL---E 205 Query: 182 SHPEF 186 H E Sbjct: 206 GHKEL 210 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 87/180 (48%), Gaps = 13/180 (7%) Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358 K EK+SKS N +DP ++ G D R F + K+ ++++GL N + Sbjct: 618 KVEKMSKSKNNGVDPENIVATYGADTARLFTMFASPPEKELEWNENGLAGSYR--FLNRV 675 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417 +VS S + ++ ++D++IL + ++++ E+++N + ++A Sbjct: 676 WRMVSESKAF----FEAGSINLENLNKADKAILRKLHQTIKKVTESIENDYHFNTSIASN 731 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + L++E+ Y K L+K + S L+ E + ++ I+L FVP + ++++ L Sbjct: 732 MELINELQDY----KVNVLEKGDITSESKKLF--TEAVNKMVIMLSPFVPHICDELWSEL 785 >gi|256846924|ref|ZP_05552378.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] gi|256717722|gb|EEU31281.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] Length = 887 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 128/273 (46%), Gaps = 18/273 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ P+ +K F+P V G DI+ F F + Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELDLFYPTSTLVTGADIIFFWVARMIMFGMYELK 508 Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 +P K VF HG + + G K+SKSLGN DP+++I+E GVDA+R+ ++ + G+D + Sbjct: 509 KIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQGQDVHFS 568 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400 D L + + AN I N +R V M L+ +D + T + D+ I+S + ++ Sbjct: 569 TDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISRLNETAKD 625 Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL---YVTVEVI 455 +++ ++ + A V + D Y + K L + D+ + L Y+ V+ Sbjct: 626 VKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLTAQYMLWTVL 684 Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQS 488 Q LL F+P + +I+ + V + Q+ Sbjct: 685 EQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQA 717 >gi|209522637|ref|ZP_03271195.1| valyl-tRNA synthetase [Arthrospira maxima CS-328] gi|209496686|gb|EDZ96983.1| valyl-tRNA synthetase [Arthrospira maxima CS-328] Length = 908 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 74/292 (25%), Positives = 128/292 (43%), Gaps = 27/292 (9%) Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFH 271 +F G+K+ DP ++ W + +T G+ + PD ++P + G DI+ F Sbjct: 453 SFGEGVKLQQDPD-VLDTWFSSGLWPFSTLGWPEKTPD--LQTYYPTNTLSTGFDIIFF- 508 Query: 272 AIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W A + + +P + V+ HG IL G+K+SKS GN IDP+ +I++ G DA Sbjct: 509 ---WVARMTMMGGYFTDQMPF-QTVYIHGLILDENGKKMSKSAGNGIDPLLLIDKYGTDA 564 Query: 325 LRYFLVRE-IACGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIP---- 378 LRY L+RE I G+D + D K + + + + N + + +L + G P Sbjct: 565 LRYTLMREVIGAGQDIRLEYDRSKDESPSVEASRNFTNKLWNAARFVLMNLKGQTPAQLG 624 Query: 379 TPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPW 434 TP SD ILS ++ +++ + M + A + + D Y + K + Sbjct: 625 TPNLEELELSDRWILSRFNQTVKQTCDYMNAYSLGEAAKGLYEFIWGDFCDWYIELAK-Y 683 Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 L+ V ++ + LL F+P + +I+ L E C Sbjct: 684 RLQGDGGVSQKVAQQVLAYILEGILKLLHPFMPHITEEIWHTLTQTGEQDCL 735 Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust. Identities = 14/32 (43%), Positives = 21/32 (65%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 H+GHA+ + D L R+HR+ G + L+ GTD Sbjct: 56 HMGHAFNNSLIDALIRYHRMRGYNTLYLPGTD 87 >gi|269861726|ref|XP_002650553.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348] gi|220065964|gb|EED43501.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348] Length = 114 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 60/101 (59%), Gaps = 1/101 (0%) Query: 5 EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +K+++++A+ Y N QPH+G+ ++ ADV +RF R G DV++ +GTDE+G I A+ Sbjct: 10 KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104 T + V +N +++ D ++ +D F T +HH+ Sbjct: 70 KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTXXHKHHE 110 >gi|218441136|ref|YP_002379465.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7424] gi|218173864|gb|ACK72597.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7424] Length = 909 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 72/291 (24%), Positives = 130/291 (44%), Gaps = 30/291 (10%) Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266 L +++ + I++ DP ++ W + +T G+ + K ++P V G D Sbjct: 447 LKTAKQQYGDNIQLSQDPD-VLDTWFSSGLWPFSTMGWPEETTDLKT-YYPTSTLVTGFD 504 Query: 267 ILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323 I+ F + A + +P K V+ HG + G+K+SKS N IDP+ +IE+ G D Sbjct: 505 IIFFWVARMTMMAGYFTGQMPF-KDVYIHGLVRDENGKKMSKSANNGIDPLILIEKYGAD 563 Query: 324 ALRYFLVREIA-CGKDGF--YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 ALRY L+RE+A G+D YD+ + + + + N + + ++ + DG P Sbjct: 564 ALRYTLIREVAGAGQDISLQYDRTS-DQSESVEASRNFANKLWNAARFVMMNLDGKTPQE 622 Query: 381 GAFTESDESILSVCSRVL----QEIRENMQNQLIHRALAQVISLVSE------VDRYFDA 430 DE L +C R + ++ + +N + H L + + E D Y + Sbjct: 623 LGNPSLDE--LELCDRWILSRFNQVVQQTRNYIDHYGLGEAAKGLYEFIWGDFCDWYIEL 680 Query: 431 QKPW----ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 K EL + T+ +V +++ LL F+P + +I+ IL Sbjct: 681 VKSRLFNKELSSSRIVAQQTLAFVLDGILK----LLHPFMPHITEEIWQIL 727 >gi|299144490|ref|ZP_07037569.1| valine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517578|gb|EFI41318.1| valine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 883 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 87/339 (25%), Positives = 143/339 (42%), Gaps = 49/339 (14%) Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------- 221 L +YY+ F+ ER +V +KD +SR+ + WG ++P Sbjct: 373 LQAYYDGKLNFVP--ERFAKVYVNWLENIKDWCISRQLW-WGHRLPVFYCVETGEVVVSR 429 Query: 222 ----DDPQY----------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267 P Y + W + +T G+ + + K F+P D+ V G DI Sbjct: 430 TDPTGSPGYENKTFKQDEDTLDTWFSSALWPFSTLGWPEQTEDLKY-FYPTDVLVTGYDI 488 Query: 268 LRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325 + F I L +P K VF G + +G K+SKSLGN IDP+E+I+ G DAL Sbjct: 489 IFFWVIRMVFSALEDMGEVPFKDVFFTGLVRDSQGRKMSKSLGNGIDPLEIIDNYGADAL 548 Query: 326 RYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAF 383 R+ L+ G D FY++ + N + AN + N +R V M L D + Sbjct: 549 RFTLISGNTPGNDMRFYNE---RVEANRNFANKLWN-ATRFVLMNLDDEKSEYKLNIDSL 604 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP---WELKK 438 D+ ILS ++ ++ + + A ++ + D Y + KP E K Sbjct: 605 KNEDKWILSKLQNLIADVTIKLDKYDMGLAAQEIYDFIWSDYCDWYIEMVKPRLYGEDNK 664 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + +LYV ++++ LL F+P + +I+ L Sbjct: 665 YKESAKAVLLYVLKDILK----LLHPFMPYITEEIWQHL 699 >gi|118580003|ref|YP_901253.1| valyl-tRNA synthetase [Pelobacter propionicus DSM 2379] gi|118502713|gb|ABK99195.1| valyl-tRNA synthetase [Pelobacter propionicus DSM 2379] Length = 886 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 82/351 (23%), Positives = 146/351 (41%), Gaps = 49/351 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 ++ ++ ++ L + ILP + N ++++ ++D +SR+ + WG +IP Sbjct: 362 WYVKVGPLAERALQAVKEGKTRILPKQWENTYYDWMEN-IRDWCISRQIW-WGHRIPAWF 419 Query: 222 -----------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256 +DP ++ W + +T G+ D +F+ Sbjct: 420 CDHCGGVTVAMEDPTSCSACGSDEIHQETDVLDTWFSSALWPFSTMGWPDKTP-ELERFY 478 Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK------GEKISKSLGNV 310 P V G DIL F W A ++ L +V +H G+K+SKS GNV Sbjct: 479 PTSCLVTGFDILFF----WVARMMMMGLHFMDQVPFTDVYIHALVRDAHGQKMSKSKGNV 534 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 IDP+ +I++ G DA R+ L A G+D ++ + N N + N +R M L Sbjct: 535 IDPLTIIDQYGTDAFRFTLAAFAAQGRDIKLAEERIAGYRN--FCNKVWN-AARFTLMNL 591 Query: 371 K--DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE-VDR 426 D DG+ + + D+ IL + + + E++ + + + + SE D Sbjct: 592 DGFDPDGITLGELSLSAGDKWILHRLNETARLVDESLTGYRYNESASALYQFTWSEFCDW 651 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y + K +L P+R T YV + L LL F+P + +I+ L Sbjct: 652 YLELSKQ-DLYNGTPERKKTSQYVLWYTLDHLLRLLHPFMPFITEEIWQAL 701 >gi|254780802|ref|YP_003065215.1| leucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] gi|254040479|gb|ACT57275.1| leucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] Length = 869 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 21/178 (11%) Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKS NVIDP++VI+ G D R F++ + +D + G+ I Sbjct: 629 EKMSKSKKNVIDPMKVIKSYGADTARLFVLSDSPPDRDIIWSNKGVDS--TYQFIQQIWR 686 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 L+ Y+ + T+ D S++S ++ L+ I EN QN ++A+A + L Sbjct: 687 LI----------YNAKDELQTSSTKKDISLISKSTKFLERIEENYQNLSFNKAVANIHEL 736 Query: 421 VSEVDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V+ + + + K KK+N DR ST+ Y ++ +L I++ +P LA + + +L Sbjct: 737 VNVISKPLMEIAK----KKSNADRISTIRY----ILEKLIIMMSPMIPHLAEECWQLL 786 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 8/188 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K ++K ++ YP+ H+GH +I DV+ARF R G VL G D G A Sbjct: 31 KNKKKYFVLEMFPYPSGNIHMGHLRNYVIGDVVARFMRASGYSVLHPMGWDAFGMPAENA 90 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGD 118 A+ V K++ QN + R + +S D DF +H + + Sbjct: 91 AREHNVHPKMWTYQNIKVMRKQLQSIGLSIDWSKDFATCDVDYYHCQQLLFLDFMKHNVI 150 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 + K W + N+ + +G+ + + PV+ +FF++S +LL Sbjct: 151 VRKTAQVNWDPVEQTVLANEQVI----NGRGWRSDA-PVEQRSLPQWFFKISDLSQELLD 205 Query: 179 YYESHPEF 186 E+ E+ Sbjct: 206 SIETLSEW 213 >gi|325095042|gb|EGC48352.1| leucyl-tRNA synthetase [Ajellomyces capsulatus H88] Length = 964 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 11/196 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y+ + YP+ H+GH I+DVLARF + G DVL G D G AA Sbjct: 63 KEKAYVLSMFPYPSGALHLGHVRVYTISDVLARFKHMKGYDVLHPMGWDAFGLPAENAAI 122 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 G+ + QN N ++ + +D + + + + + T RI + +G Y Sbjct: 123 ERGIDPAKWTMQNIANMKEQLRAIGARFDWDRELMTCSSEFYKHTQRIF-LMLYQEGLAY 181 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 + Y D+ +++V A+G + + V+ +E + +FFR++A+++ LL Sbjct: 182 QAKARVNYDPIDKTVLANEQV--DANGCSWRSGAK-VEKLELKQWFFRITAFKEALLKDL 238 Query: 181 ES----HPEFILPIER 192 ES PE +L +++ Sbjct: 239 ESLEAGWPERVLSMQK 254 >gi|315231914|ref|YP_004072350.1| isoleucyl-tRNA synthetase [Thermococcus barophilus MP] gi|315184942|gb|ADT85127.1| isoleucyl-tRNA synthetase [Thermococcus barophilus MP] Length = 1065 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 65/265 (24%), Positives = 130/265 (49%), Gaps = 12/265 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD-ILRFHAIYWPAFLLSANLP 285 ++ VW D+ + GY + + K WPAD V G+D + ++ A +++ + Sbjct: 549 VLDVWFDSGIASWASLGYPREKELFE-KLWPADFIVEGEDQVTKWFYSQQAASVIAFDTV 607 Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 + V HG++L KG+K+SKSLGN+I P EV+++ G DA R++++ ++ + Sbjct: 608 PYRHVAMHGYVLDEKGDKMSKSLGNIIRPEEVVQKEGRDAFRFYMLWATTPWENLRFSWK 667 Query: 345 GLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402 GL KR+ L N + L + +S+ + + P F E D+ +LS + +++ + Sbjct: 668 GLAQVKRMLNILWN-VYILAATYMSLDKFEPGKVNPEELPFREEDKWVLSRVNSLVETVT 726 Query: 403 ENMQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDRASTVLYVTVEVIRQL 458 ++ + RA + V E + R++ ++ W ++ +PD+ + + +V L Sbjct: 727 NGIETFYLTRATRGIYDFVVEDLSRWYVRLIRKRLW-VEGDDPDKLAA-YWTLWKVFDVL 784 Query: 459 AILLQAFVPKLANKIFDILFVADEN 483 L+ F P +A I+ + E+ Sbjct: 785 LRLMAPFTPYIAEAIYQNMIARKES 809 Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 7/86 (8%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQN 64 K Y Y + H+G A+ II D++ RF + G +V G D HG I K Q Sbjct: 41 KYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVRRQPGFDMHGLPIEVKVEQA 100 Query: 65 AG------VTTKVFVDQNSRNFRDMA 84 G + K+ VD + R+ A Sbjct: 101 LGLKIKKDIEEKIGVDNFIKKCREFA 126 >gi|219846966|ref|YP_002461399.1| valyl-tRNA synthetase [Chloroflexus aggregans DSM 9485] gi|219541225|gb|ACL22963.1| valyl-tRNA synthetase [Chloroflexus aggregans DSM 9485] Length = 922 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 24/204 (11%) Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276 G++ PD ++ W + +T G+ D+ D + +F+P + G DIL F W Sbjct: 462 GVQDPD----VLDTWFSSGLWPFSTLGWPDDTDDYR-RFYPTSVMETGYDILFF----WV 512 Query: 277 AFLLSANL-----PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 A ++ P V+ HG + + G K+SKS GNV++P+EV+E+ G DALRY LV Sbjct: 513 ARMMMMGCYLTGQPPFHTVYLHGLVRDEHGRKMSKSFGNVVNPLEVVEQYGSDALRYTLV 572 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI--LKDYDGMIPTP-----GAF 383 G+D + ++ N AN I N+ + + L D + TP F Sbjct: 573 TSGTPGQDVNLNPQRIEAARN--FANKIWNITRFVIGKLGDLPRTDSVKITPEILHREEF 630 Query: 384 TESDESILSVCSRVLQEIRENMQN 407 T +D ILS + ++ E+ M+ Sbjct: 631 TLADRWILSRYAYLVAEVDRLMEG 654 Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust. Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 24/152 (15%) Query: 12 AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNA 65 +I PN + H+GHA + I D++ R+ R+ G L+ GTD G ++ K + Sbjct: 49 SIPPPNVTGELHLGHAMFVAIEDLMIRWRRMQGYQTLWVPGTDHAGIATQTQVEKLLERE 108 Query: 66 GVTTKV----------------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109 G + + + + +R R + D S + F T + Sbjct: 109 GTSRQAVGREEFLRRTWEWKEKYGGEITRQLRRLGASCDWSRERF--TLDPGLSRAVHTA 166 Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 +K++ D G IY+G Y +S + + +D EV Sbjct: 167 FKRLYDDGLIYRGIYLVNWSPKLQTAVSDLEV 198 >gi|81428459|ref|YP_395459.1| valyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] gi|90101528|sp|Q38XD1|SYV_LACSS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|78610101|emb|CAI55150.1| Valyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] Length = 882 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 15/183 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P + V G DI+ F W + ++ +L Sbjct: 447 VLDTWFSSALWPFSTMGWPNTEAPDFKRYFPTNTLVTGYDIIFF----WVSRMIFQSLEF 502 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 ++ V HG I +G K+SKSLGN IDP+EVIE+ G DALR+FL G+D Sbjct: 503 TEQRPFEHVLIHGLIRDEQGRKMSKSLGNGIDPMEVIEKYGADALRWFLTSGSTPGQDVR 562 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--MIPTPGAFTESDESILSVCSRVL 398 + + N N I N SR V M L+D +P +D+ ILS ++ + Sbjct: 563 FSYTKMDAAWN--FINKIWN-ASRFVIMNLEDTPAPTKVPEAANLDLTDKWILSQLNQTV 619 Query: 399 QEI 401 ++ Sbjct: 620 ADV 622 Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D+L R R+ G DVL+ G D G K+ Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDVLWLPGMDHAGIATQAKVEAKLA 101 Query: 64 NAGVT-----TKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+DQ + M LD S + F T + D R Sbjct: 102 EQGISRYDLGREKFIDQVWEWKDEYAATIHDQWAKMGLSLDYSRERF--TLDDGLSDAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +KG IY+G Y + + +D EV ++ +G +Y+ + Sbjct: 160 KVFVNLYNKGLIYRGEYIINWDPKARTALSDIEVLHQDDEGAFYHVSY 207 >gi|323702140|ref|ZP_08113807.1| isoleucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] gi|323532827|gb|EGB22699.1| isoleucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] Length = 930 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 65/106 (61%), Gaps = 7/106 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 IM VW D+ +++L LD + WPADL++ G D R F++ + +++ Sbjct: 525 IMDVWFDSGSSHLAV---LDQKELWPDLHWPADLYLEGSDQHRGWFNSSLSTSVAVTSKP 581 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 P K V +HGF++ KG K+SKSLGNV+DP++VI ++G D LR ++ Sbjct: 582 PY-KAVLTHGFVVDEKGRKMSKSLGNVVDPLKVINQMGADILRLWV 626 Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust. Identities = 14/48 (29%), Positives = 24/48 (50%) Query: 15 YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 Y N H+GH ++ D++ ++ + G D + G D HG I + A Sbjct: 58 YANGHIHLGHTLNKVLKDMVVKYRSMSGYDAPYVPGWDTHGLPIEQQA 105 >gi|225554709|gb|EEH03004.1| leucyl-tRNA synthetase [Ajellomyces capsulatus G186AR] Length = 965 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 11/196 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y+ + YP+ H+GH I+DVL+RF + G DVL G D G AA Sbjct: 63 KEKAYVLSMFPYPSGALHLGHVRVYTISDVLSRFKHMKGYDVLHPMGWDAFGLPAENAAI 122 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 G+ + QN N ++ + +D + + + + + T RI + +G Y Sbjct: 123 ERGIDPAKWTMQNIANMKEQLRAIGARFDWDRELMTCSPEFYKHTQRIF-LMLYQEGLAY 181 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 + Y D+ +++V A+G + + V+ +E + +FFR++A+++ LL Sbjct: 182 QAKARVNYDPIDKTVLANEQV--DANGCSWRSGAK-VEKLELKQWFFRITAFKEALLKDL 238 Query: 181 ES----HPEFILPIER 192 ES PE +L ++R Sbjct: 239 ESLEAGWPERVLSMQR 254 >gi|260435463|ref|ZP_05789433.1| valyl-tRNA synthetase [Synechococcus sp. WH 8109] gi|260413337|gb|EEX06633.1| valyl-tRNA synthetase [Synechococcus sp. WH 8109] Length = 914 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 27/270 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + A + + Sbjct: 461 VLDTWFSSGLWPFSTLGWPDADSADLQRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEM 520 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYD 342 P + V+ HG + + K+SKS GN IDP+ +I+ G DALR+ LVRE+A G+D D Sbjct: 521 PF-QDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVREVAGAGQDIRLD 579 Query: 343 KDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PGAFTESDESILSVCS 395 D K + + N + + L + PT P A +D ILS + Sbjct: 580 YDRKKDTSATVEASRNFANKLWNATRFALMNLGSETPTQLGESDPAALQLADRWILSRLA 639 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST------- 446 RV +E + + + A + D Y + K ++ NP + Sbjct: 640 RVNRETAQRYSSYGLGEAAKGLYEFAWNDVCDWYLELSK----RRLNPGENPSAEALADQ 695 Query: 447 --VLYVTVEVIRQLAILLQAFVPKLANKIF 474 V +VI Q+ ++L +P L +++ Sbjct: 696 RVAKQVLAKVISQMHLMLHPLMPHLTEELW 725 >gi|269864707|ref|XP_002651669.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348] gi|220064101|gb|EED42387.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348] Length = 404 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 76/311 (24%), Positives = 132/311 (42%), Gaps = 44/311 (14%) Query: 28 MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87 ++ ADV +RF R G DV++ +GTDE+G I A+ T + V +N +++ D Sbjct: 37 LLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAEKQNTTPEQIVQKNRVLHKEVYDFF 96 Query: 88 DISYDDFIRTTEKRHHDTCRILWKKISDKGD--------------------IYKGCYSGW 127 ++ +D F T +HH+ + ++ K D D I C G Sbjct: 97 NLDFDYFGHTCTTKHHELVQNIFLKTIDHFDEKEINQMFCPKCKQFLADRYIEGECACGA 156 Query: 128 YSLRDEA-----YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 + D+ Y+ D + + + + + P Q + FF L ++L Y+++ Sbjct: 157 TTHGDQCDTCGRYHEDSQ--ELTNFRCSICKTTP-QIKTTKQLFFNL----NELQHYFQT 209 Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWGIKIP----DDPQYIMYVWIDALTN 237 R +++K L ++RK WG+ +P DD + YVW DA Sbjct: 210 MDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWGVPVPLKEYDDK--VFYVWYDAPIG 267 Query: 238 YLT-TTGYLDNPDGSKAKF-WPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292 YL+ L++ G+ F W + +GKD + FH+I +P L + K + S Sbjct: 268 YLSFLQQKLESDQGTSDVFEWLKGSKWVLFMGKDNVPFHSIIFPCILYALKEYSVKPIQS 327 Query: 293 HGFILHKGEKI 303 I+ + EKI Sbjct: 328 ENSIVEQIEKI 338 >gi|313897678|ref|ZP_07831220.1| valine--tRNA ligase [Clostridium sp. HGF2] gi|312957630|gb|EFR39256.1| valine--tRNA ligase [Clostridium sp. HGF2] Length = 874 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 67/234 (28%), Positives = 105/234 (44%), Gaps = 39/234 (16%) Query: 203 GLKDLSLSRKTFDWGIKIP--------------DDPQY---------IMYVWIDALTNYL 239 ++D +SR+ + WG +IP +DPQ ++ W + Sbjct: 399 NIEDWCISRQLW-WGHRIPAWYHKETGEIYVGMEDPQDLENWIQDEDVLDTWFSSALWPF 457 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSH 293 +T G+ D +++P D+ V G DI+ F W A + N P K V H Sbjct: 458 STLGWPKETDDLN-RYFPNDVLVTGYDIIFF----WVARMAFQTRYCMKNRPF-KDVLIH 511 Query: 294 GFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 G + +G K+SKSLGN IDP++VI + GVDALR+FL G+D Y + K +A Sbjct: 512 GLVRDAQGRKMSKSLGNGIDPMDVIADHGVDALRFFLTTNSTPGQDLRYIDE--KVEASA 569 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 + N I N + I +D + + D+ IL + VL+ + NM+ Sbjct: 570 NFINKIWNASRFVLMQIPEDMEVSDIDLSNASMIDKWILKRFNEVLENVTANME 623 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 22/133 (16%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 H+GHA++ + D+++R+ R+ G D+L+ G D +AG+ T+ VD+ ++ Sbjct: 52 HLGHAWDTTLQDIVSRYKRMQGYDMLWLPGMD-----------HAGIATQAKVDERLKS- 99 Query: 81 RDMADVLDISYDDFIRTT---EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEA--- 134 + DI + F+ ++ + T R W K+ D + ++ L D Sbjct: 100 -EGISRYDIGREKFLERAWEWKEEYASTIRKQWAKMGLSLDYSRERFTLDEGLSDAVRRV 158 Query: 135 ---YYNDDEVYKG 144 YND +Y+G Sbjct: 159 FVDLYNDGLIYQG 171 >gi|229074897|ref|ZP_04207906.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock4-18] gi|228708234|gb|EEL60398.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock4-18] Length = 1033 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N D + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKDLFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++E+ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + A ++ +LV EV ++ + WE N ++AS Y T+ EV+ Sbjct: 689 VRTALDEYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKASA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust. Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I DV+AR+ + G V+ G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRAIKDVVARYKTMAGYKVVRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|242277727|ref|YP_002989856.1| valyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] gi|242120621|gb|ACS78317.1| valyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] Length = 884 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 74/316 (23%), Positives = 131/316 (41%), Gaps = 58/316 (18%) Query: 204 LKDLSLSRKTFDWGIKIP--------------DDP--------------QYIMYVWIDAL 235 ++D +SR+ + WG +IP +DP + ++ W + Sbjct: 400 IRDWCISRQIW-WGHRIPAWTCEDCGELIVANEDPTKCTKCGSSKLIQEEDVLDTWFSSA 458 Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295 +T G+ D AK++P + + G DIL F W A ++ + ++ H Sbjct: 459 LWPFSTLGWPDETP-ELAKYYPTSVLITGFDILFF----WVARMMMMGIHFQDQIPFHHV 513 Query: 296 ILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK---DGL 346 +H G+K+SKS GNVIDP+E+ ++ G DALR+ L A G+D + +G Sbjct: 514 YIHALVRDEHGKKMSKSTGNVIDPLEMSDKYGTDALRFTLTSFAAMGRDIKLSEQRIEGY 573 Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---AFTESDESILSVCSRVLQEIRE 403 + VN + S L + DG P A ++E IL V +RE Sbjct: 574 RHFVNK---------IWNSARFALMNLDGKKPEAALEDASGLANEWILHRLEEVKDTMRE 624 Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461 +++ + + + D Y + KP +L + R L V V+ + +L Sbjct: 625 AVESYRFNEVAQTMYKFIWNEFCDWYLEMIKP-DLYSDDETRKGATLKVLWTVLSETMVL 683 Query: 462 LQAFVPKLANKIFDIL 477 L +P + +++ +L Sbjct: 684 LHPVMPFVTQEVWSVL 699 Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 65/168 (38%), Gaps = 25/168 (14%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA + + D+L R+ R G +VL+ GTD G + Sbjct: 41 SIVIPPPNVTGVLHMGHALNITLQDILCRYQRQQGKNVLWVPGTDHAGIATQNVVERQLK 100 Query: 68 TTKVFVDQNSR--------------------NFRDMADVLDISYDDFIRTTEKRHHDTCR 107 T D R R M +D + F T + + R Sbjct: 101 TEGKTRDDLGREKFIERVWEWKEEKGGHILKQIRRMGASVDWDRECF--TFDDQRAKAVR 158 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ ++ ++G IYKG Y + R DDEV + G +YN ++ Sbjct: 159 KVFVQLYEEGLIYKGNYIINWCNRCHTALADDEVEHSPKPGHFYNIKY 206 >gi|295397317|ref|ZP_06807409.1| valine--tRNA ligase [Aerococcus viridans ATCC 11563] gi|294974391|gb|EFG50126.1| valine--tRNA ligase [Aerococcus viridans ATCC 11563] Length = 887 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 91/200 (45%), Gaps = 28/200 (14%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ D +++P V G DI+ F Sbjct: 439 GMEAPADSENWEQDPDVLDTWFSSALWPFSTMGWPDTDAEDFKRYYPTSTLVTGYDIIFF 498 Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W A ++ L K V HG I +G K+SKSLGN +DP++V+ E G DA Sbjct: 499 ----WVARMIFQGLEFTGRRPFKNVLIHGLIRDSQGRKMSKSLGNGVDPMDVVNEYGADA 554 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--YDGM------ 376 LR+FL G+D Y+++ L+ N N I N SR M L D YD + Sbjct: 555 LRWFLATGSTPGQDIRYNEEKLEAAWN--FINKIWN-ASRYAIMNLDDLTYDEIDLSNVN 611 Query: 377 -IPTPGAFTESDESILSVCS 395 I T +E+I SV + Sbjct: 612 EIKDQWILTRLNETIASVTA 631 >gi|254525794|ref|ZP_05137846.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202] gi|221537218|gb|EEE39671.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202] Length = 915 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 75/297 (25%), Positives = 137/297 (46%), Gaps = 30/297 (10%) Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269 + K F IK+ D ++ W + +T G+ + D K++P + V G DI+ Sbjct: 452 ANKKFGLNIKLVRDKD-VLDTWFSSGLWPFSTLGWPNINDLDFKKWYPNSVLVTGFDIIF 510 Query: 270 FHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGV 322 F W A + + N+P K V+ HG + +K+SKS GN IDPI +I++ G Sbjct: 511 F----WVARMTMMGNTFTNNIPF-KDVYIHGLVRDENNKKMSKSSGNGIDPILLIDKYGS 565 Query: 323 DALRYFLVREIA-CGKDGFYDKDGLKKRVNA-DLANGIGNLVSRSVSMILKDYDGMIPTP 380 DALR+ L+RE+A G+D D D K + + + N + + +L + Sbjct: 566 DALRFALIREVAGAGQDIRLDFDRKKDTSSTVEASRNFANKLWNATKFVL--INKTSNNN 623 Query: 381 GAFTESDESILSVCSR----VLQEIRENMQNQLIHRALAQVISLVSE------VDRYFD- 429 + ESDE+ L +C + L +I + L L + L+ E D Y + Sbjct: 624 DSLNESDENSLELCDKWILSKLNQINIKVAALLKEYKLGESAKLLYEFTWNDFCDWYVEF 683 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 A++ + K+T + S V ++V+ + +++ F+P + +++ +L + +N Sbjct: 684 AKQRFNNKETINRQISE--KVLIKVLNDILVMIHPFMPHITEELWHVLQLKPDNELL 738 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----KAAQNAGVTTK 70 H+GHA+ + DV+ RF RL G +VL GTD + K +N G T++ Sbjct: 54 HMGHAFNTALIDVVVRFQRLLGKNVLCLPGTDHASIAVQTILEKQLKNEGKTSE 107 >gi|23099516|ref|NP_692982.1| valyl-tRNA synthetase [Oceanobacillus iheyensis HTE831] gi|81746073|sp|Q8EPN2|SYV_OCEIH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|22777745|dbj|BAC14017.1| valyl-tRNA synthetase [Oceanobacillus iheyensis HTE831] Length = 883 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 63/259 (24%), Positives = 117/259 (45%), Gaps = 15/259 (5%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P ++ V G DI+ F + + + + Sbjct: 452 VLDTWFSSALWPFSTMGWPNEDSADLKRYFPTNVLVTGYDIIFF---WVSRMIFQSKEFM 508 Query: 287 PKKVFS----HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341 +K F HG I G K+SKSLGN +DP++VIE+ G D+LRYFL+ G+D + Sbjct: 509 NEKPFEDTLLHGLIRDADGRKMSKSLGNGVDPMDVIEKYGADSLRYFLMTGSTPGQDLRF 568 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQE 400 + ++ N AN + N SR M ++ + I G + D IL+ + +++ Sbjct: 569 HWEKVESTWN--FANKVWN-ASRFSIMNMEGFTYEDIDLTGELSLPDRWILARLNETIEQ 625 Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 + N A + + + + D Y + K L + ++ T V V+ Q Sbjct: 626 VTRNSNKYEFGEAGRHLYNFIWDEFCDWYIEMAKL-SLYGEDENKKKTTRSVLAHVLDQT 684 Query: 459 AILLQAFVPKLANKIFDIL 477 +L F+P + +I+ L Sbjct: 685 MRMLHPFMPFITEEIWQQL 703 Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D + R R+ G DVL+ G D G A A V Sbjct: 46 SIVIPPPNVTGRLHLGHAWDTSMQDTITRMKRMQGYDVLWLPGMDHAG-----IATQAKV 100 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 ++ +R F + A Y FIR T ++ D Sbjct: 101 EARLKESGTNRYELGREKFLEKAWEWKEEYAAFIRSQWEKLGLGLDYSRERFTLDEGLSD 160 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 R ++ K+ +KG IY+G Y W A + + +Y+ G++Y+ ++ Sbjct: 161 AVREVFVKLYEKGLIYRGEYIINWDPSTKTALSDIEVIYEEIQGKFYHMRY 211 >gi|254423093|ref|ZP_05036811.1| valyl-tRNA synthetase [Synechococcus sp. PCC 7335] gi|196190582|gb|EDX85546.1| valyl-tRNA synthetase [Synechococcus sp. PCC 7335] Length = 1130 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 79/293 (26%), Positives = 123/293 (41%), Gaps = 38/293 (12%) Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277 I++ DP ++ W + ++T G+ + ++P V G DI+ F W A Sbjct: 465 IQLKQDPD-VLDTWFSSGLWPMSTLGWPNTSTPDYQFYYPTQTLVTGFDIIFF----WVA 519 Query: 278 FL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 + + +P V+ HG + +K+SKS GN IDP+ +I++ G DALRY LV Sbjct: 520 RMTLMAGHFTGKMPF-DTVYIHGLVRDENNQKMSKSKGNGIDPLVLIDKYGTDALRYTLV 578 Query: 331 REIA-CGKDGFYDKDGLKKRVNA-----DLANGIGNLVSRSVSMILKDYD----GMIPTP 380 RE+A G+D D D +A + N + N SR V M L GM T Sbjct: 579 REVAGAGQDIRLDYDRQTDESSAVEASRNFTNKLWN-ASRFVMMNLGGQSPSGLGMPGTA 637 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP----- 433 G +DE ILS + R + + A ++ D Y + KP Sbjct: 638 GPLELADEWILSKFHQAAGRSRTYLDKYGLGEAAKELYDFTRGDFCDWYIELVKPRLYGE 697 Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 E K+T + VL T++ LL F+P + +++ L E C Sbjct: 698 GETKRTAQQTLAYVLEGTLK-------LLHPFMPHITEELWHTLTGVGEEDCL 743 Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust. Identities = 14/32 (43%), Positives = 21/32 (65%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 HIGHA+E + D + R+ R+ G + L+ GTD Sbjct: 62 HIGHAFEQALIDTVVRYQRMKGKNTLYLPGTD 93 >gi|90962047|ref|YP_535963.1| valyl-tRNA synthetase [Lactobacillus salivarius UCC118] gi|90821241|gb|ABD99880.1| Valyl-tRNA synthetase [Lactobacillus salivarius UCC118] Length = 886 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W + ++ ++ Sbjct: 452 VLDTWFSSALWPFSTMGWPDTESPDFKRYFPTNTLVTGYDIIFF----WVSRMIFQSVEF 507 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K+ V HG I +G K+SKSLGN IDP++VI++ G DALR+FL A G+D Sbjct: 508 TKRRPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVR 567 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQ 399 + + N N I N SR V M L D + +P + +D+ ILS + ++ Sbjct: 568 FSYTKMDAAWN--FINKIWN-ASRFVIMNLDSDVELSLPEASEWQLADKWILSRLNDTVR 624 Query: 400 EI 401 ++ Sbjct: 625 DV 626 Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 21/174 (12%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55 +++E S I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 34 EDKEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQ 93 Query: 56 QKIAKAAQNAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKR 101 K+ G++ + FV++ + AD+ L + YD T + Sbjct: 94 AKVEARLAEDGISRYDLGREKFVEKVWEWKGEYADIIHQQWAKLGLSLDYDRERFTLDDG 153 Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 R ++ + KG IY+G Y + + +D EV +K G +Y+ ++ Sbjct: 154 LSKAVRKVFVTLYKKGLIYRGEYIINWDPKARTALSDIEVIHKDDKGAFYHVKY 207 >gi|118580151|ref|YP_901401.1| leucyl-tRNA synthetase [Pelobacter propionicus DSM 2379] gi|166231626|sp|A1APS3|SYL_PELPD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|118502861|gb|ABK99343.1| leucyl-tRNA synthetase [Pelobacter propionicus DSM 2379] Length = 823 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 10/186 (5%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +R K Y+ YP+ + H+GH I DV+ RF R+ G +VL G D G AA Sbjct: 31 DRPKYYLLEMFPYPSGRIHMGHVRNYSIGDVIGRFKRMRGFNVLHPMGWDAFGMPAENAA 90 Query: 63 -QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 QN K + +N R + +SYD + T + ++ + ++ ++ KG Sbjct: 91 IQNKSHPAK-WTYENIDYMRGQLKKMGLSYDWGRELATCDLEYYRWEQKIFLEMFAKGLA 149 Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 Y K Y W + N+ + DG + +PVQ E + +FFR++ Y ++LLS Sbjct: 150 YKKTSYVNWCPTCETVLANE----QVEDGACWRCD-SPVQQKELDQWFFRITQYAEELLS 204 Query: 179 YYESHP 184 Y E P Sbjct: 205 YTEKLP 210 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 23/188 (12%) Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 + + G ++ G K+SKS GNV+DP +IE G D R F + KD ++ G+ Sbjct: 569 LLTQGMVIKDGAKMSKSKGNVVDPNALIERYGADTARLFSLFAAPPEKDLDWNDQGVDGS 628 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQN 407 N + LV+ + +I G P PG T + ++ + ++++ E+++ Sbjct: 629 FR--FLNRVWKLVNDRLELI----SGAAPLDVPG-LTGEERTLRRAVHKTIRKVTEDIEG 681 Query: 408 QL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466 + + A+A V+ L++ V + D P +A V+ E + L +LL FV Sbjct: 682 RFHFNTAIAAVMELLN-VLQSADLSTP---------QAGAVMK---EALESLVLLLAPFV 728 Query: 467 PKLANKIF 474 P +A +++ Sbjct: 729 PHMAEELW 736 >gi|329934565|ref|ZP_08284606.1| valyl-tRNA synthetase [Streptomyces griseoaurantiacus M045] gi|329305387|gb|EGG49243.1| valyl-tRNA synthetase [Streptomyces griseoaurantiacus M045] Length = 874 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 7/178 (3%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284 ++ W + +T G+ + GS AKF+P + V G D+L F F L A Sbjct: 454 VLDTWFSSGLWPFSTLGWPEQ-TGSLAKFYPNSVLVTGYDLLFFWIARMMMFGLYAMDGA 512 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P + + HG + G+K+SKS GNVI+P++ +++ G DALR+ L R G D + Sbjct: 513 PPFRTIALHGMVRDQNGKKMSKSFGNVINPLDWMDKYGSDALRFTLARGANPGVDVPIGE 572 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 D ++ N AN I N +R M G +P + +D ILS + V+ E+ Sbjct: 573 DWVQGSRN--FANKIWN-ATRFALMNGATVQGPLPDASEMSSTDRWILSRLNSVVAEV 627 >gi|163868662|ref|YP_001609871.1| valyl-tRNA synthetase [Bartonella tribocorum CIP 105476] gi|161018318|emb|CAK01876.1| Valyl-tRNA synthetase [Bartonella tribocorum CIP 105476] Length = 910 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 19/259 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D + F+P L V G DI+ +W A ++ L Sbjct: 481 VLDTWFSSALWPFSTLGWPDKTT-ELSTFYPTSLSVTGFDII----FFWVARMMMMGLHF 535 Query: 285 ----PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 P P V+ H + KG K+SKS GN+IDP+E+I++ DALR+ L A G+D Sbjct: 536 MGEVPFPT-VYVHALVRDQKGAKMSKSKGNIIDPLELIDQYSADALRFTLAIMAAQGRDV 594 Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399 D + N A + N +R M +D A + IL+ S+ + Sbjct: 595 KLDTSRIAGYRN--FATKLWN-ATRFAQMNGVRHDPTFKPGQAKLALNRWILTELSKTIS 651 Query: 400 EIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 + +++ + + A + + + D Y + KP + N D S T V+ + Sbjct: 652 AVTAGIEHYKFNESAATLYRFIWNTFCDWYLELLKP-IFQGENEDAKSEAQACTAWVLDE 710 Query: 458 LAILLQAFVPKLANKIFDI 476 + LL F+P + +++ + Sbjct: 711 VYKLLHPFMPHMTEELWSL 729 Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 12/97 (12%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 H+GHA I D++ RF R+ G +VL+ G D +AG+ T++ V++ Sbjct: 55 HMGHALNTTIQDIMVRFQRMRGRNVLWQPGMD-----------HAGIATQMVVERQLAE- 102 Query: 81 RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117 R ++ + FI + H+T I+ ++ G Sbjct: 103 RQEPTRQEMGREKFIERIWEWRHETGGIIANQLRRLG 139 >gi|227891066|ref|ZP_04008871.1| valyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741] gi|301300900|ref|ZP_07207072.1| valine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] gi|227867155|gb|EEJ74576.1| valyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741] gi|300851499|gb|EFK79211.1| valine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 886 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W + ++ ++ Sbjct: 452 VLDTWFSSALWPFSTMGWPDTESPDFKRYFPTNTLVTGYDIIFF----WVSRMIFQSVEF 507 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K+ V HG I +G K+SKSLGN IDP++VI++ G DALR+FL A G+D Sbjct: 508 TKRRPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVR 567 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQ 399 + + N N I N SR V M L D + +P + +D+ ILS + ++ Sbjct: 568 FSYTKMDAAWN--FINKIWN-ASRFVIMNLDSDVELSLPEASEWQLADKWILSRLNDTVR 624 Query: 400 EI 401 ++ Sbjct: 625 DV 626 Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 21/174 (12%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55 +++E S I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 34 EDKEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQ 93 Query: 56 QKIAKAAQNAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKR 101 K+ G++ + FV++ + AD+ L + YD T + Sbjct: 94 AKVEARLAEDGISRYDLGREKFVEKVWEWKGEYADIIHQQWAKLGLSLDYDRERFTLDDG 153 Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 R ++ + KG IY+G Y + + +D EV +K G +Y+ ++ Sbjct: 154 LSKAVRKVFVTLYKKGLIYRGEYIINWDPKARTALSDIEVIHKDDKGAFYHVKY 207 >gi|67540712|ref|XP_664130.1| hypothetical protein AN6526.2 [Aspergillus nidulans FGSC A4] gi|40738676|gb|EAA57866.1| hypothetical protein AN6526.2 [Aspergillus nidulans FGSC A4] gi|259480097|tpe|CBF70918.1| TPA: leucyl-tRNA synthetase (AFU_orthologue; AFUA_6G04910) [Aspergillus nidulans FGSC A4] Length = 990 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 11/197 (5%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E+ K YI + YP+ H+GH I+DVLARF+R+ G DVL G D G AA Sbjct: 86 EKPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHDVLHPMGWDAFGLPAENAA 145 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119 GV+ + +N ++ + S++ +F + + + T RI + +KG Sbjct: 146 IQHGVSPAGWTTENIAKMKEQLRSISTSFNWEREFATCSPEFYEHTQRIFL-MLYEKGLA 204 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL-- 177 Y+ Y D+ +++V A+G + + V+ + +FFR++ ++D+LL Sbjct: 205 YQADAMVNYDPVDKTVLANEQV--DANGCSWRSGAK-VEKKKLRQWFFRITEFKDQLLGD 261 Query: 178 --SYYESHPEFILPIER 192 S S PE +L +R Sbjct: 262 LDSLAGSWPERVLTQQR 278 >gi|143148|gb|AAA22571.1| transfer RNA-Leu synthetase [Bacillus subtilis] Length = 804 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 11/196 (5%) Query: 3 EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 E++K Y YP+ A H+GH D+L+R R+ G DVL G D G + Sbjct: 29 EKQKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQY 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G VF QN NFR L SY D I TT+ ++ + ++ K+ +KG Sbjct: 89 ALDTGNDPAVFTKQNIDNFRRQIQALGFSYDWDREINTTDPEYYKWTQWIFLKLYEKGLA 148 Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 Y W N++ + DG+ H PV+ + + +++AY D+LL Sbjct: 149 YVDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRLMKQWMLKINAYADRLLE 203 Query: 179 YYES--HPEFILPIER 192 E PE I ++R Sbjct: 204 DLEELDWPESIKDMQR 219 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 35/155 (22%) Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISK 305 K+ P D+++ G + H +Y W FL + K K+++ G IL EK+SK Sbjct: 520 KWLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSK 579 Query: 306 SLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKK----------- 348 S GNV++P E++ G D LR + L IA + G DG ++ Sbjct: 580 SKGNVVNPDEIVASHGADTLRLYEMFMGPLDASIAWSESGL---DGARRFLDRVWRLFIE 636 Query: 349 ---RVNADLANGIGNLVSR----SVSMILKDYDGM 376 +N + G G + R +V + Y+G+ Sbjct: 637 DSGELNGKIVEGAGETLERVYHETVMKVTDHYEGL 671 >gi|229096714|ref|ZP_04227685.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-29] gi|228686920|gb|EEL40827.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-29] Length = 1033 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N D + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKDLFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++E+ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + A ++ +LV EV ++ + WE N ++AS Y T+ EV+ Sbjct: 689 VRTALDEYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKASA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust. Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I D++AR+ + G V+ G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRAIKDLVARYKTMAGFKVVRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|55379275|ref|YP_137125.1| isoleucyl-tRNA synthetase [Haloarcula marismortui ATCC 43049] gi|74579285|sp|Q5UZ84|SYI_HALMA RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|55232000|gb|AAV47419.1| isoleucyl-tRNA synthetase [Haloarcula marismortui ATCC 43049] Length = 1074 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 76/302 (25%), Positives = 145/302 (48%), Gaps = 37/302 (12%) Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-- 252 E + K + DL+++ + + ++ D + VW+D+ + T G ++ P+ ++ Sbjct: 502 ENVDLHKGTVDDLTITEDSTTY-TRVGD----VFDVWLDS---SVATWGTVNYPEQTEDF 553 Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLS--ANLPLP-KKVFSHGFI-LHKGEKISKSLG 308 + WPADL + D R +W +S A +P K+V HG+ + G +SKS G Sbjct: 554 EELWPADLIMEAHDQTR--GWFWSQLGMSTAATGEIPYKQVLMHGYANMPDGRGMSKSKG 611 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD---GFYDKDGLKKRVNADLANGIGNLVSRS 365 +IDP EVIE+ G D +R FL+ A G+D + + +++R+N + N+ Sbjct: 612 VLIDPHEVIEKHGRDPMRLFLLSVTAQGEDMNFSWEETAEMQRRLNI-----LWNVARFP 666 Query: 366 VS-MILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 + M D+D T + DE +LS V + + ++M + +A+ +++ Sbjct: 667 LPYMRADDFDPEETTVEDLRDDLELVDEWVLSRLQSVTEAMTDSMDDFENDKAVDELLEF 726 Query: 421 VSE-VDRYFDA---QKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFD 475 V E V R++ ++ WE + + +A+ Y T+ V+ +A L F P +A +++ Sbjct: 727 VVEDVSRFYIQVVRERMWEEEDSASKQAA---YATLYRVLESVAALFAPFTPFVAEQVYG 783 Query: 476 IL 477 L Sbjct: 784 AL 785 >gi|159904351|ref|YP_001551695.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] gi|159889527|gb|ABX09741.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] Length = 933 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 98/422 (23%), Positives = 168/422 (39%), Gaps = 79/422 (18%) Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 PV+ + +F R+ D+ ++ + P+F R +V +G++D +SR+ + Sbjct: 369 PVEPLLSTQWFVRMEPMADRCRAHLVKGEPQFF--PTRWEKVYRDWLTGIRDWCISRQLW 426 Query: 215 DWGIKIP-------------DDPQYIMYV----------------------------WID 233 WG +IP D YI+ + W Sbjct: 427 -WGHRIPAWFVVSETDSIVTDHTPYIVALSEEEALLQAREKFGDDVAIEQDADVLDTWFS 485 Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVF 291 + +T G+ D D ++P + V G DI+ F + A + +P K V+ Sbjct: 486 SGLWPFSTLGWPDEDDSDFNCWYPTNTLVTGFDIIFFWVARMTMMAGAFTGQMPF-KDVY 544 Query: 292 SHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKD-GLKK 348 HG + + K+SKSLGN IDP+ +I+ G DALR+ LV+E+A G+D D D Sbjct: 545 IHGLVRDEQNRKMSKSLGNGIDPLVLIDRYGTDALRFALVKEVAGAGQDIRLDYDRKTDT 604 Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--------SDESILSVCSRVLQE 400 V + A N + + L + G F E SD+ ILS +R+ E Sbjct: 605 SVTVEAARNFANKLWNATRFALINL-GTTTFDETFEELNFSDLQLSDKWILSRLARINSE 663 Query: 401 IRENMQNQLIHRALAQV--ISLVSEVDRYFDAQKPWELKKTNPDRAST---------VLY 449 + + + A + S D Y + K ++ NP + T Sbjct: 664 TSKKFTSYALGEAAKGLYEFSWNDFCDWYLELIK----RRLNPGDSLTQSQLKDRRIAQQ 719 Query: 450 VTVEVIRQLAILLQAFVPKLANKIF-DILFVADENRCFQSLDQRLKPGFM---LHKTFDP 505 V +V+R+L ++L +P L +++ I D+ +L + GF+ L +F Sbjct: 720 VMFKVLRELLVMLHPLMPHLTEELWHGITGFPDQKMLALNLWPACQEGFLDEELESSFSA 779 Query: 506 IF 507 +F Sbjct: 780 LF 781 Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 S I PN H+GHA+ + D + RF RL G +VL GTD Sbjct: 52 SLVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGKNVLCLPGTD 96 >gi|302869352|ref|YP_003837989.1| valyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] gi|302572211|gb|ADL48413.1| valyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] Length = 872 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 74/261 (28%), Positives = 116/261 (44%), Gaps = 21/261 (8%) Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA-NL 284 ++ W + +T G+ + PD AKF+P + V G DIL F F L A + Sbjct: 450 VLDTWFSSGLWPFSTLGWPERTPD--LAKFYPTSVLVTGYDILFFWVARMMMFGLYAMDG 507 Query: 285 PLPKKVFS-HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 P V + HG + + G+K+SKS GNV+DP++ I+ G DA R+ L R G+D Sbjct: 508 EQPFDVVALHGMVRDEHGKKMSKSFGNVVDPLDWIDRFGADATRFTLARGANPGQDVPVS 567 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402 ++ + N N + N +R + DG +P G + D ILS + V E+ Sbjct: 568 EEWCQGSRN--FCNKLWN-ATRFALLNGAHTDGPLPAAGDLSTVDRWILSRLAHVTAEVD 624 Query: 403 ENMQNQLIHRALAQVISLVSE------VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 E + A+V L+ D Y + KP L + P A V V+ Sbjct: 625 EQFEAY----EFAKVCDLLYHFAWDDVCDWYVELSKP-VLAEGGP-AADATRRVLGHVLD 678 Query: 457 QLAILLQAFVPKLANKIFDIL 477 QL LL +P + ++++ L Sbjct: 679 QLLRLLHPVIPFVTDELWAAL 699 >gi|50365171|ref|YP_053596.1| valyl-tRNA synthetase [Mesoplasma florum L1] gi|81827303|sp|Q6F1B1|SYV_MESFL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|50363727|gb|AAT75712.1| valyl tRNA synthetase [Mesoplasma florum L1] Length = 873 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 84/355 (23%), Positives = 159/355 (44%), Gaps = 57/355 (16%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ ++ D +L ES+ + ER ++V+ + D ++SR+ + WG +IP Sbjct: 362 WFVKMDSFADMILKLQESNDKIKFFPERFDQVLKKWMENIHDWTISRQLW-WGHRIPAWY 420 Query: 222 -DDPQYIMYV----------WI---DALTNYLTTTGY----LDNPDGSKAKFW----PAD 259 + + +YV WI D L + ++ + L +G ++K++ P Sbjct: 421 NKEDKTKIYVGMEAPKDAENWIQDEDVLDTWFSSGLWPFATLMRGEGFESKYFKEYLPNG 480 Query: 260 LHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312 + V G DI+ W + ++ + +P K V HG + + G K+SKSLGN ID Sbjct: 481 VLVTGHDII----FSWVSRMIFQTIEYTGQIPF-KDVLIHGLVRDEHGAKMSKSLGNGID 535 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 P++VI G D+LR+ L+ G+D Y +K N N + N SR V M L++ Sbjct: 536 PMDVIVNNGSDSLRFSLLTNSTPGQDIRYSDSKVKAAWN--FINKLWN-ASRYVLMNLEE 592 Query: 373 -----YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 + I + E+D+ +L+ S+V +++ N LI + + + D Sbjct: 593 DFKPWEEQAILNSNSLNETDKWVLTEFSKVSKQV-----NYLIDKYEFAIAGKML-YDFV 646 Query: 428 FDAQKPW-----ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++ W ++ NP V +++ + I+L ++P + I+ L Sbjct: 647 WNTYCSWYIEFAKVNLNNPKTKEATQQTIVYLLKNILIMLHPYLPFVTEHIYKTL 701 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 47/179 (26%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S + PN + HIGHA++ + D + RF +L+G DVL+ G D +AG+ Sbjct: 40 SIVLPPPNVTGKLHIGHAWDGSLQDAIIRFKKLNGFDVLYLPGMD-----------HAGI 88 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL---WKKIS---------- 114 +T+V V+ R ++ + F+ K H+ I+ W K+ Sbjct: 89 STQVKVEAKLR--EQGISRFELGREKFLEQAWKWKHEYAAIIRQQWSKLGLAFDYSMEKF 146 Query: 115 ------------------DKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 +KG IYKG W ++ A N + +YK +G Y+ ++ Sbjct: 147 TLDDDINKIVTEIFVDFYNKGLIYKGKRIVNWDPMQKTAISNVEVIYKEVEGFMYHFKY 205 >gi|229115692|ref|ZP_04245097.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock1-3] gi|228667834|gb|EEL23271.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock1-3] Length = 1033 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N D + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKDLFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++E+ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + A ++ +LV EV ++ + WE N ++AS Y T+ EV+ Sbjct: 689 VRTALDEYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKASA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust. Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I D++AR+ + G V+ G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRAIKDLVARYKTMAGFKVVRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|323454405|gb|EGB10275.1| hypothetical protein AURANDRAFT_22805 [Aureococcus anophagefferens] Length = 955 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 20/187 (10%) Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYW 275 G + DP ++ W + T G+ D PD SK F+PA G DIL +W Sbjct: 500 GTALTRDPD-VLDTWFSSGLWPFATVGWPDATPDFSK--FYPATCLETGYDIL----FFW 552 Query: 276 PAFLLSANLPLPKK-----VFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFL 329 A ++ L + ++ HG + K EK+SK+ GNV+DP++V++E G DALR+ L Sbjct: 553 VARMVMLGLEFTGESPFEVIYMHGLVRDKNNEKMSKTKGNVVDPLDVVDEFGADALRFSL 612 Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389 V + G+D D +K+ N + N I N + + G P+ G ++ + Sbjct: 613 VTGVTPGQDVPLSMDKVKE--NRNFCNKIWN----AARFLEPKLAGATPSDGPIQAAELA 666 Query: 390 ILSVCSR 396 + V R Sbjct: 667 AMPVFER 673 Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 11/55 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75 H+GHA + + D+LARFHR G L+ GTD +AG+ T++ V++ Sbjct: 105 HLGHAMFVALQDILARFHRARGRPTLWLPGTD-----------HAGIATQLLVER 148 >gi|229102814|ref|ZP_04233510.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-28] gi|228680599|gb|EEL34780.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-28] Length = 1033 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N D + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKDLFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++E+ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + A ++ +LV EV ++ + WE N ++AS Y T+ EV+ Sbjct: 689 VRTALDEYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKASA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I D++AR+ + G V+ G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|309389514|gb|ADO77394.1| valyl-tRNA synthetase [Halanaerobium praevalens DSM 2228] Length = 884 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 13/126 (10%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLG 308 F+P D+ V G+DI+ F W A ++ L + ++ HG I +G K+SKSLG Sbjct: 478 FYPTDVLVTGRDIIFF----WVARMIFMGLKFQDQKPFSDIYIHGLIRDAQGRKMSKSLG 533 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 N IDP+++I++ G DALR+ L+ G D + ++ L+ N AN I N SR V M Sbjct: 534 NGIDPLDIIDQFGTDALRFTLITGNTPGNDMRFREERLEASRN--FANKIWN-ASRFVLM 590 Query: 369 ILKDYD 374 L+D++ Sbjct: 591 NLEDFE 596 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 27/176 (15%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQ---- 56 E EK S + PN Q H+GHA + + D+L R+ R+ G L+ GTD H Sbjct: 34 ETEKGTFSIVMPPPNITGQLHMGHALDNTLQDILTRWKRMQGYRSLWLPGTD-HASIATE 92 Query: 57 -KIAKAAQNAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTE 99 K+ + G +T + F+++ + + M D S + F T + Sbjct: 93 VKVVNKLREEGIAKEDITREEFLEKAWEWKEEYGTRITNQLKKMGSSCDWSRERF--TLD 150 Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 + D ++ K+ ++G IY+G Y + +D EV ++ ++G++Y+ ++ Sbjct: 151 QGCSDAVEEVFIKLYEEGLIYQGDYIVNWCPSCHTTLSDIEVEHQESEGKFYHYKY 206 >gi|225562390|gb|EEH10669.1| methionine-tRNA synthetase [Ajellomyces capsulatus G186AR] Length = 214 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 14/174 (8%) Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV---SMILKDY 373 +E GVDA+R++L + A D Y+ + +R L GIGNL SR + ++D Sbjct: 1 MERFGVDAMRFYLTIDGAQTSDSDYENSYIVERYKKGLQWGIGNLASRLLRGKKWSVRDS 60 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433 + G + +L V ++ M+ RAL ++ ++ + ++YF +P Sbjct: 61 VVLAAQGGLARDKHHELLEVMP---GRVKAEMEQLDPRRALNSIMEIIYQTNKYFHDMQP 117 Query: 434 WELKKTNPDRA--------STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 W L + S+ LY T E +R ILLQ F+P A ++ D+L V Sbjct: 118 WSLVNSQTQPQTQPQNPTLSSALYTTAESLRIAGILLQPFMPHKAAELLDMLGV 171 >gi|299782988|gb|ADJ40986.1| Valine--tRNA ligase [Lactobacillus fermentum CECT 5716] Length = 886 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 20/198 (10%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ + +++P V G DI+ F Sbjct: 435 GMEAPADAENWVQDKDVLDTWFSSALWPFSTMGWPNTDAEDFKRYFPTTTLVTGYDIIFF 494 Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ +L K V HG I +G K+SKSLGN IDP++V+E+ GVDA Sbjct: 495 ----WVSRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGIDPMDVVEKYGVDA 550 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAF 383 LR+FLV G+D + + N N I N SR V M L D +P + Sbjct: 551 LRWFLVTGSTPGQDIRFSYKKMDASWN--FINKIWN-ASRYVIMNLGDMPAPQLPDQSKW 607 Query: 384 TESDESILSVCSRVLQEI 401 +D ILS + ++++ Sbjct: 608 DLADRWILSRLNTTVKDV 625 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 S I PN + H+GHA++ + D++ R R+ G DVL+ G D G Sbjct: 41 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDVLWLPGMDHAG 88 >gi|220916675|ref|YP_002491979.1| valyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] gi|219954529|gb|ACL64913.1| valyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] Length = 1051 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 19/261 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + + + F+P + G DI+ +W A ++ L Sbjct: 462 VLDTWFSSGLWPFSTMGWPEQTETLRT-FYPTSVMETGHDII----FFWVARMMMMGLHF 516 Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +V LH KG+K+SK+ GNVIDP+ + ++ G DALR+ L A G+D Sbjct: 517 MGEVPFRTVYLHPMVRDEKGQKMSKTKGNVIDPLVITDQYGADALRFTLAALTAQGRDIK 576 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVL 398 K+ ++ AN + N SR M L Y G P A T +D IL+ R + Sbjct: 577 LAKERIEG--YRAFANKLWN-ASRFALMNLSGYQERGEDPARLARTPADRWILARLQRAV 633 Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 E E + + A V + V D Y + K L +P+ +V V V ++ Sbjct: 634 NETVEALDAFRFNDAANAVYAFVWHELCDWYIELAKE-ALASEDPEARRSVQAVLVHCLQ 692 Query: 457 QLAILLQAFVPKLANKIFDIL 477 LL F+P + +++ +L Sbjct: 693 TSYRLLHPFMPFITEELWHVL 713 Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 +R + S + PN H+GHA + DVL R+ R+ G + L+ GTD G Sbjct: 44 DRTRPPFSIVLPPPNVTGSLHLGHALTATLQDVLIRWKRMSGFNTLWLPGTDHAG 98 >gi|297620770|ref|YP_003708907.1| isoleucyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] gi|297376071|gb|ADI37901.1| isoleucyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] Length = 1037 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 105/466 (22%), Positives = 196/466 (42%), Gaps = 86/466 (18%) Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR--------HHDTCR----I 108 A + AG+ VD N R ++ + + D + KR HH TCR Sbjct: 332 ACERAGIGLVCPVDNNGRYTNEIPEYTGMFVKDADKQIIKRLKEMGRVVHHGTCRHRYPF 391 Query: 109 LWKKISDKGDIYKGCYSGWY----SLRDEAYYNDDEVY-------KGADGQYYNAQHN-- 155 W+ SD IYK S W+ ++D N+D+++ +G G++ + Sbjct: 392 CWR--SDTPLIYKAV-STWFVSVEKIKDAMLANNDKIHWMPEHLKEGRFGKWLEGARDWA 448 Query: 156 ---------PVQ-WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK 205 P+ W+ ++G + + + L + E+ + + Sbjct: 449 ISRNRYWGTPIPLWIADDGEIYVAGSIHE-------------LEVATNTEITDLHRHFID 495 Query: 206 DLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADL 260 DL+ R KTF +IP+ + W ++ + Y P ++A F +PAD Sbjct: 496 DLTFIRNGKTFK---RIPE----VFDCWFESGSMPYAQNHY---PFNNRALFESNFPADF 545 Query: 261 HVIGKDILRFHAIYWPAFLLSA---NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEV 316 G D R ++ +LS N P K V +G +L + G K+SK L N DP++V Sbjct: 546 IAEGLDQTR--GWFYTLTVLSTALFNKPAFKNVVVNGIVLAEDGNKMSKRLKNYPDPMDV 603 Query: 317 IEEVGVDALRYFLVREIAC-GKDGFYDKDGLK---KRVNADLANGIGNLVSRSVSMILKD 372 +++ G DA+R +++ A G+D + + G++ +++ N V+ + K Sbjct: 604 VKKYGADAIRLYMMHSGAVKGEDLRFQEKGVELILRQIFIPFWNAYSFFVTYARIYDWKP 663 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF---D 429 D P P A D ILS+ +++ +++ M + RA+ I + ++ ++ Sbjct: 664 SDSY-PHPQAVI--DRWILSMVNKLNRDVEAGMDEYNLSRAVEPFIGFIDQLTNWYIRRS 720 Query: 430 AQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 ++ WE + T + D A LY +V+ L + FVP +++ I+ Sbjct: 721 RRRFWEEEATRDRDEAFQTLY---QVLLALTKIAAPFVPFISDAIY 763 >gi|260495113|ref|ZP_05815242.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33] gi|260197556|gb|EEW95074.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33] Length = 887 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 127/272 (46%), Gaps = 18/272 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ P+ +K F+P V G DI+ F F + Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELDLFYPTSTLVTGADIIFFWVARMIMFGMYELK 508 Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 +P K VF HG + + G K+SKSLGN DP+++I+E GVDA+R+ ++ + G+D + Sbjct: 509 KIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQGQDVHFS 568 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400 D L + + AN I N +R V M L+ +D + T + D+ I+S + ++ Sbjct: 569 TDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISRLNETAKD 625 Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL---YVTVEVI 455 +++ ++ + A V + D Y + K L + D+ + L Y+ V+ Sbjct: 626 VKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLTAQYMLWTVL 684 Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQ 487 Q LL F+P + +I+ + V + Q Sbjct: 685 EQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQ 716 >gi|138896204|ref|YP_001126657.1| valyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] gi|196250160|ref|ZP_03148854.1| valyl-tRNA synthetase [Geobacillus sp. G11MC16] gi|134267717|gb|ABO67912.1| Valyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] gi|196210344|gb|EDY05109.1| valyl-tRNA synthetase [Geobacillus sp. G11MC16] Length = 880 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 32/184 (17%) Query: 204 LKDLSLSRKTFDWGIKIP------------------------DDPQYIMYVWIDALTNYL 239 ++D +SR+ + WG +IP DP ++ W + Sbjct: 403 IRDWCISRQLW-WGHRIPAWYHKETGEIYVDHEPPADIENWEQDPD-VLDTWFSSALWPF 460 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL 297 +T G+ D +++P D+ V G DI+ F + + + P K V HG + Sbjct: 461 STMGWPDTEAPDYKRYYPTDVLVTGYDIIFFWVSRMIFQGLEFTGKRPF-KDVLIHGLVR 519 Query: 298 H-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 +G K+SKSLGN +DP++VI++ G DALRYFL + G+D + + ++ N AN Sbjct: 520 DAQGRKMSKSLGNGVDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKVEATWN--FAN 577 Query: 357 GIGN 360 I N Sbjct: 578 KIWN 581 Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 13/77 (16%) Query: 5 EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +K + I PN + H+GHA++ + D++ R R+ G DVL+ G D Sbjct: 38 DKQPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMD---------- 87 Query: 63 QNAGVTTKVFVDQNSRN 79 +AG+ T+ V++ R Sbjct: 88 -HAGIATQAKVEEKLRQ 103 >gi|317051233|ref|YP_004112349.1| valyl-tRNA synthetase [Desulfurispirillum indicum S5] gi|316946317|gb|ADU65793.1| valyl-tRNA synthetase [Desulfurispirillum indicum S5] Length = 884 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 61/259 (23%), Positives = 115/259 (44%), Gaps = 18/259 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + T G+ + KF+P + V DI+ F W A ++ A Sbjct: 450 VLDTWFSSQLWPFATMGW-PGSTATLEKFYPTSVLVTAFDIIFF----WVARMIMAGYTF 504 Query: 287 P-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 ++V+ H + K G K+SKS+GNVIDP+ +I++ G DALR+ L+ + G+D Sbjct: 505 TDQKPFQEVYIHALVRDKYGRKMSKSVGNVIDPLGIIDQYGADALRFTLISQAGQGRDIK 564 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 D D ++ N + N + ++ + + +P A SD IL + + E Sbjct: 565 LDIDRIEGYTT--FVNKMWNALRFTLHTMPEHPSSQLPENLAI--SDAWILGRLNATIAE 620 Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 +R + + A A + + + D Y + K K ++ ++A + ++ + Sbjct: 621 VRRGLDGYQFNEASAAIYRFIWQELCDWYIELAKHRLYKGSDEEKAGASAVLCHCLLTSM 680 Query: 459 AILLQAFVPKLANKIFDIL 477 LL F+P + +I+ L Sbjct: 681 K-LLHPFMPFVTEEIYQQL 698 Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 13/69 (18%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN HIGHA M + DVL R+ R+DG + L+ GTD +A + Sbjct: 39 SIVIPPPNVTGYLHIGHALCMTLQDVLIRYKRMDGYEALWLPGTD-----------HASI 87 Query: 68 TTKVFVDQN 76 T++ V++ Sbjct: 88 ATQIVVEKQ 96 >gi|258516438|ref|YP_003192660.1| leucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] gi|257780143|gb|ACV64037.1| leucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] Length = 828 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 59/236 (25%), Positives = 109/236 (46%), Gaps = 26/236 (11%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299 D +KA W P D ++ G + H +Y F L+SA P + + + G +L + Sbjct: 522 DKAKADRWMPVDQYIGGVEHAILHLLYARFFAKVFYDLKLISAEEPF-ENLLTQGMVLKE 580 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKS GNV+ P E+I+ G D R F++ +D + G++ N + Sbjct: 581 GAKMSKSKGNVVSPEEIIKRYGADTARLFILFAAPPERDLEWSDQGVEGSYR--FLNRVW 638 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418 LV+ + +LK + G + + + + ++++ E+++ + + A++ ++ Sbjct: 639 RLVTPLAADLLK---APVKPEGEVSGVHKEMRRLSHYTIKKVTEDIEERFNFNTAVSAIM 695 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 LV+ + Y D K PDR V+ E I L +LL F P LA +++ Sbjct: 696 ELVNGLYHYRD-------KLAEPDRDPAVMR---EAIEALLVLLSPFAPHLAEELW 741 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 1/91 (1%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ER + Y YP+ H+GH I DV+ARF + G DVL G D G AA Sbjct: 31 ERPEYYCLEMFPYPSGNLHMGHVRNYSIGDVVARFKSMRGFDVLHPMGWDAFGLPAENAA 90 Query: 63 -QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92 ++ + + N N R L +SYD Sbjct: 91 IKHGNMHPADWTFANIDNMRTQLKQLGLSYD 121 >gi|302389257|ref|YP_003825078.1| valyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] gi|302199885|gb|ADL07455.1| valyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] Length = 882 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 78/278 (28%), Positives = 123/278 (44%), Gaps = 36/278 (12%) Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276 G + DP ++ W + +T G+ D+ + + F+P V G DI+ F W Sbjct: 441 GSSLEQDPD-VLDTWFSSALWPFSTLGWPDDTEDLRY-FYPTSALVTGYDIIFF----WV 494 Query: 277 AFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 A ++ + K+ V G + +G K+SKSLGN IDP+EVIE+ G D LR+ L Sbjct: 495 ARMIFMAMEFMKEEPFEYVAITGLVRDAQGRKMSKSLGNGIDPLEVIEKYGADTLRFALC 554 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390 G D + + K + + AN I N SR V M L+ ++ P + D I Sbjct: 555 TGNTPGNDIRFSWE--KAEHSRNFANKIWN-ASRFVMMNLEGFEPGEPELENLSLKDRWI 611 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISL-----------VSEVDRYFDAQKPWELKKT 439 LS + V E+ E + + A +V ++++D Y D + KK Sbjct: 612 LSRLNDVTSEVTEFLDKFEVGIAAQKVYDFFWSEFCDWYIEMAKIDLYGDDENA---KK- 667 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 R VLY +E + + LL FVP + +I+ L Sbjct: 668 ---RTQRVLYTVLERVLR---LLHPFVPFITEEIWQHL 699 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 55/143 (38%), Gaps = 26/143 (18%) Query: 5 EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58 EK + I PN HIGHA I D+L R+ R+ G L+ GTD G K+ Sbjct: 36 EKEPFTIVIPPPNVTGHLHIGHALNNTIQDILIRYKRMQGYPTLWLPGTDHAGIATEAKV 95 Query: 59 AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC------------ 106 + G++ D F + Y D I K+ +C Sbjct: 96 KEQLAEEGLSK---YDLGREKFLERVWAWKEKYGDTIVNQLKKLGASCDWSRFRFTLDEG 152 Query: 107 -----RILWKKISDKGDIYKGCY 124 R ++ ++ +KG IY+G Y Sbjct: 153 LSRAVREVFVRLYEKGLIYRGDY 175 >gi|256821549|ref|YP_003145512.1| leucyl-tRNA synthetase [Kangiella koreensis DSM 16069] gi|256795088|gb|ACV25744.1| leucyl-tRNA synthetase [Kangiella koreensis DSM 16069] Length = 881 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 9/194 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK Y + YP+ + H+GH I DV++RF R+ G +VL G D G AA Sbjct: 39 REKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRFQRMQGKNVLQPIGWDAFGLPAENAAV 98 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + + +N + +L +Y D + T + ++ + + K+ +KG +YK Sbjct: 99 KNKASPAPWTYENIEYMKGQLKMLGFAYDWDRELATCKPEYYRWEQWFFTKLYEKGLVYK 158 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 S + D+ +++V GA + PV+ E +F +++AY ++LL+ Sbjct: 159 KTSSVNWCPNDQTVLANEQVVDGACWRC----DTPVEQKEIPQWFIKITAYAEELLNDLD 214 Query: 179 YYESHPEFILPIER 192 + PE + ++R Sbjct: 215 KLDGWPEMVKTMQR 228 >gi|227514511|ref|ZP_03944560.1| valine--tRNA ligase [Lactobacillus fermentum ATCC 14931] gi|227087068|gb|EEI22380.1| valine--tRNA ligase [Lactobacillus fermentum ATCC 14931] Length = 884 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 20/198 (10%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ + +++P V G DI+ F Sbjct: 435 GMEAPADAENWVQDKDVLDTWFSSALWPFSTMGWPNTDAEDFKRYFPTTTLVTGYDIIFF 494 Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ +L K V HG I +G K+SKSLGN IDP++V+E+ GVDA Sbjct: 495 ----WVSRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGIDPMDVVEKYGVDA 550 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAF 383 LR+FLV G+D + + N N I N SR V M L D +P + Sbjct: 551 LRWFLVTGSTPGQDIRFSYKKMDASWN--FINKIWN-ASRYVIMNLGDMPAPQLPDQSKW 607 Query: 384 TESDESILSVCSRVLQEI 401 +D ILS + ++++ Sbjct: 608 DLADRWILSRLNTTVKDV 625 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 S I PN + H+GHA++ + D++ R R+ G DVL+ G D G Sbjct: 41 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDVLWLPGMDHAG 88 >gi|260663368|ref|ZP_05864259.1| valyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] gi|260552220|gb|EEX25272.1| valyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] Length = 884 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 20/198 (10%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ + +++P V G DI+ F Sbjct: 435 GMEAPADAENWVQDKDVLDTWFSSALWPFSTMGWPNTDAEDFKRYFPTTTLVTGYDIIFF 494 Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ +L K V HG I +G K+SKSLGN IDP++V+E+ GVDA Sbjct: 495 ----WVSRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGIDPMDVVEKYGVDA 550 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAF 383 LR+FLV G+D + + N N I N SR V M L D +P + Sbjct: 551 LRWFLVTGSTPGQDIRFSYKKMDASWN--FINKIWN-ASRYVIMNLGDMPAPQLPDQSKW 607 Query: 384 TESDESILSVCSRVLQEI 401 +D ILS + ++++ Sbjct: 608 DLADRWILSRLNTTVKDV 625 Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 S I PN + H+GHA++ + D++ R R+ G DVL+ G D G Sbjct: 41 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGYDVLWLPGMDHAG 88 >gi|295669003|ref|XP_002795050.1| leucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] gi|226285743|gb|EEH41309.1| leucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] Length = 972 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK YI YP+ H+GH IAD+LARF + G DVL G D G AA Sbjct: 67 KEKAYILAMFPYPSGTLHMGHLRVYTIADMLARFKHMKGYDVLHPMGWDAFGLPAENAAI 126 Query: 64 NAGVTTKVFVDQNSRNFRD--MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+ + QN N ++ MA ++ + T + + L+ + ++G Y+ Sbjct: 127 ERGIDPAQWTMQNIANMKEQFMAIGAHFDWNRELMTCSPEFYKHTQRLFLMLYERGLAYQ 186 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177 Y D+ +++V A+G + + V+ +E + +FFR++A+++ LL Sbjct: 187 AKALVNYDPVDKTVLANEQV--NANGCSWRSGAK-VKKVELKQWFFRITAFKEALLKDLD 243 Query: 178 SYYESHPEFILPIER 192 + + PE +L ++R Sbjct: 244 ALADGWPERVLSMQR 258 >gi|213418567|ref|ZP_03351633.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 232 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 99/227 (43%), Gaps = 30/227 (13%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K+ ++ A+ Y N H+GH E I ADV R+ R+ G +V F D HG I AQ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+T + + + S+ + +ISYD++ T + + +++ ++ + G I Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125 Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161 S Y ++ + D KG + + A ++P + +E Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184 Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK 205 E +FF L ++ + L ++ S L + N++ + +SGL+ Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQ 228 >gi|15679374|ref|NP_276491.1| isoleucyl-tRNA synthetase [Methanothermobacter thermautotrophicus str. Delta H] gi|3334357|sp|O27428|SYI_METTH RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|2622484|gb|AAB85852.1| isoleucyl-tRNA synthetase [Methanothermobacter thermautotrophicus str. Delta H] Length = 1044 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 76/280 (27%), Positives = 131/280 (46%), Gaps = 30/280 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 ++ VWID+ Y + + F P D G D R F++ + + Sbjct: 515 VLDVWIDSGVAGWAALHYPSETELFREWF-PYDFITEGHDQTRGWFYSQLGCGVIALDEV 573 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P ++V HGF L +G K+SKSLGNV++P +VIE+ G D LR++L+ E +D + Sbjct: 574 PY-RRVLMHGFTLDEEGRKMSKSLGNVVEPEDVIEKYGADVLRFYLLWENKPWEDLKFVW 632 Query: 344 DGLKKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPG-------AFTESDESILSVCS 395 D L+ VN + N + N+ V + M L + PG +F + D ILS + Sbjct: 633 DELRN-VNK-MFNILWNVYVFATTYMSLDRF-----QPGDHSAEDLSFRDEDRWILSRIN 685 Query: 396 RVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPDR--ASTVLY 449 V ++ E ++N HRA ++ +V ++ R++ + W +++ +PD+ A LY Sbjct: 686 SVALKVTEAIENLHFHRATREIHDFIVEDLSRWYIRLIRSRTW-IERDDPDKLAAYHTLY 744 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489 V++ L + L P + I+ L E +S+ Sbjct: 745 T---VLKTLIVTLSPMAPHVCEDIYQNLVRGAEPDSPESI 781 >gi|296328555|ref|ZP_06871074.1| valine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154364|gb|EFG95163.1| valine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 887 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 70/275 (25%), Positives = 127/275 (46%), Gaps = 22/275 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ P+ +K F+P + V G DI+ F F + Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELDLFYPTNTLVTGADIIFFWVARMIMFGMYELK 508 Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 +P K VF HG + + G K+SKSLGN DP+++I+E GVDA+R+ ++ + G+D + Sbjct: 509 KIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQGQDVHFS 568 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400 D L + + AN I N +R V M L+ +D + T + D+ I+S + ++ Sbjct: 569 TDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISRLNETAKD 625 Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS-----TVLYVTVE 453 +++ ++ + A V + D Y + K ++ N D T Y+ Sbjct: 626 VKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAK---IRLYNDDEDKKISKLTAQYMLWT 682 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488 ++ Q LL F+P + +I+ + V + Q Sbjct: 683 ILEQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQQ 717 >gi|218290828|ref|ZP_03494897.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1] gi|218239186|gb|EED06387.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1] Length = 881 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 92/390 (23%), Positives = 162/390 (41%), Gaps = 57/390 (14%) Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 +LR+E Y +E A G + + V+ E +F R+ L L Sbjct: 327 ALREEGYLVKEETLDHAVG-HCDRCGTVVEPYLSEQWFVRMEPLARDALERARRGELRFL 385 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQYIMYV---- 230 P +R +V + ++D +SR+ + WG +IP DD + ++ Sbjct: 386 P-DRFMKVFEQWLTNVRDWCISRQLW-WGHRIPAWYCASCGQVSVSRDDLDHCLHCGSAD 443 Query: 231 ----------WIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279 W + +T G+ ++ PD A+F+P L V G DIL +W A + Sbjct: 444 VKQDEDVLDTWFSSALWPFSTMGWPEHTPD--LARFYPTSLLVTGYDIL----FFWVARM 497 Query: 280 L------SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 + + +P + V HG + KG+K+SKS GN IDP++VI++ G DALR+ L Sbjct: 498 VFMGVHFTGKMPF-QTVLLHGLLRDAKGQKMSKSKGNGIDPMDVIDKYGADALRFMLASN 556 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---GAFTESDES 389 G D + + ++ N N + N +R V M ++ DG P P + +D Sbjct: 557 TVLGNDLRFSWEKVEGARN--FLNKLWN-AARFVLMNVE--DGFSPQPLEAQSLDLADRF 611 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447 IL ++ + ++ + A V + D Y + K L ++ Sbjct: 612 ILHRLGETIRRVTSALEEYDVGEAARAVYEFTWDEFCDWYIEFAKI-NLYGDREEKKRQT 670 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V + V+ ++ LL ++P + +I+ L Sbjct: 671 QSVLLTVLSRVLALLHPYIPFVTEEIWQAL 700 Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 11/59 (18%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRN 79 H+GHA + + D+ RF R+ G L+ GTD +AG+ T+ V+Q R Sbjct: 53 HLGHALDTTLQDIATRFRRMQGYSTLWVPGTD-----------HAGIATQARVEQALRE 100 >gi|184154973|ref|YP_001843313.1| valyl-tRNA synthetase [Lactobacillus fermentum IFO 3956] gi|183226317|dbj|BAG26833.1| valyl-tRNA synthase [Lactobacillus fermentum IFO 3956] Length = 884 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 20/198 (10%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G++ P D + ++ W + +T G+ + +++P V G DI+ F Sbjct: 435 GMEAPADAENWVQDKDVLDTWFSSALWPFSTMGWPNTDAEDFKRYFPTTTLVTGYDIIFF 494 Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ +L K V HG I +G K+SKSLGN IDP++V+E+ GVDA Sbjct: 495 ----WVSRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGIDPMDVVEKYGVDA 550 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAF 383 LR+FLV G+D + + N N I N SR V M L D +P + Sbjct: 551 LRWFLVTGSTPGQDIRFSYKKMDASWN--FINKIWN-ASRYVIMNLGDMPAPQLPDQSKW 607 Query: 384 TESDESILSVCSRVLQEI 401 +D ILS + ++++ Sbjct: 608 DLADRWILSRLNTTVKDV 625 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 S I PN + H+GHA++ + D++ R R+ G DVL+ G D G Sbjct: 41 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDVLWLPGMDHAG 88 >gi|239941124|ref|ZP_04693061.1| valyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] gi|239987602|ref|ZP_04708266.1| valyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379] gi|291444565|ref|ZP_06583955.1| valyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] gi|291347512|gb|EFE74416.1| valyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] Length = 873 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 27/264 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + D S AKF+P + V G DIL F F L N + Sbjct: 453 VLDTWFSSGLWPFSTLGWPERTD-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYVNDGV 511 Query: 287 PK--KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P + HG + + G+K+SKS GNV++P++ +++ G DALR+ L R G D + Sbjct: 512 PPFGTIVLHGMVRDEHGKKMSKSFGNVVNPLDWMDKYGSDALRFTLARGANPGTDVPIGE 571 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR- 402 D ++ +A +N I N +R M +G +P+ + +D ILS ++ + ++ Sbjct: 572 DWVQG--SAKFSNKIWN-ATRFALMNGATIEGELPSAEEMSVTDRWILSRLNKTVADVDA 628 Query: 403 -------ENMQNQLIHRALAQVISLVSEVDR--YFDAQKPWELKKTNPDRASTVLYVTVE 453 + L H A +V E+ + +F +P E+ V E Sbjct: 629 FYDDFQFAKISEALRHFAWDEVFDWYVELSKTTFFAGGRPAEVSG----------RVLGE 678 Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477 V+ + LL VP + ++ L Sbjct: 679 VLDVMLRLLHPIVPFVTEALWTAL 702 >gi|328953118|ref|YP_004370452.1| Valyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] gi|328453442|gb|AEB09271.1| Valyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] Length = 886 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 74/263 (28%), Positives = 116/263 (44%), Gaps = 22/263 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ P+ ++ F+P + V DIL F W A ++ L Sbjct: 449 VLDTWFSSALWPFSTLGW---PEQTRELTLFYPTSVLVTAFDILFF----WVARMMMMGL 501 Query: 285 PLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 K+V +H +G+K+SKS GNV+DP+EV+EE G DA R+ L A G+D Sbjct: 502 YFMKEVPFREVYIHALVRDAEGQKMSKSKGNVVDPLEVMEEYGTDAFRFSLAAFAAMGRD 561 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSR 396 ++ + N N I N SR M L DYD A + + I+S + Sbjct: 562 VRLSEERIAGYRN--FVNKIWN-ASRFTLMNLADYDYAAAAHDTVALSLEERWIVSRLQQ 618 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 V Q + E + + +A Q+ D Y + KP T+P R V E+ Sbjct: 619 VCQAVTEALDSYNFDQAANQLYQFAWHEFCDWYLELIKPALYDNTDPVRRRHTQRVLQEI 678 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 + L LL F+P + +I+ L Sbjct: 679 LSALLRLLHPFMPFVTEEIWHKL 701 >gi|255020636|ref|ZP_05292698.1| Leucyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] gi|254969872|gb|EET27372.1| Leucyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] Length = 823 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 12/197 (6%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E EK Y+ YP+ Q H+GH I D +AR+ R+ G VL G D G AA Sbjct: 36 EGEKYYVLAMFPYPSGQLHMGHVRNYSIVDAIARYQRMRGKSVLHPMGWDAFGLPAENAA 95 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119 GV + +N + R L +SYD +F T + ++ + L+ K+ ++G + Sbjct: 96 LKHGVAPAQWTFENIAHMRGQLKRLGLSYDWTREFATCTPE-YYRWEQWLFLKLWERGLV 154 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 Y+ + + D+ +++V DG+ + + V+ E +F R++AY D+LL Sbjct: 155 YQKESTVNWDPVDQTVLANEQV---VDGRGWRSGAL-VERREIRQWFLRITAYADELLQG 210 Query: 180 YE----SHPEFILPIER 192 E P+ +L ++R Sbjct: 211 LEQLQGQWPDQVLTMQR 227 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 25/192 (13%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G +L G K+SKS GN +DP E+++ G D R F++ F Sbjct: 571 RRLLTQGMVLKDGAKMSKSKGNTVDPQELLDRYGADTARLFIL---------FAAPPEQS 621 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 + G + R V +++DYDG P P + + + + ++ + N++ Sbjct: 622 LEWSDSAVEGAYRFLQR-VWRLVQDYDGEPTPLPAKLSGAARDLRRAIHQCIERVTFNLE 680 Query: 407 NQ-LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465 + + A+A + L + + R D + P EL+ V E + L +L F Sbjct: 681 ERHHFNVAIAACMELTNTLAR-VDGKDP-ELRA-----------VLGEGLSALVRMLAPF 727 Query: 466 VPKLANKIFDIL 477 P LA + L Sbjct: 728 TPHLAEACWMAL 739 >gi|237809562|ref|YP_002894002.1| leucyl-tRNA synthetase [Tolumonas auensis DSM 9187] gi|237501823|gb|ACQ94416.1| leucyl-tRNA synthetase [Tolumonas auensis DSM 9187] Length = 861 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 17/241 (7%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++EK Y + YP+ + H+GH I DV++R+ RL+G +VL G D G AA Sbjct: 34 DKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLNGKNVLQPIGWDAFGLPAENAA 93 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N + +L +SY D + T +++ + + ++ KG +Y Sbjct: 94 IKNNSAPAKWTYENIEYMKGQLKMLGLSYDWDRELATCTPQYYRWEQWFFTELYKKGLVY 153 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178 K S + D+ +++V DG + PV+ E +F +++AY ++LL+ Sbjct: 154 KKTSSVNWCPNDQTVLANEQV---QDGCCWRCD-TPVEQKEIPQWFVKITAYAEELLTDL 209 Query: 179 -YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233 + PE + ++R R+E ++ + S ++FD PD + YV + Sbjct: 210 DKLDGWPEMVKTMQRNWIGRSEGLTMTFH----VENSEQSFDIYTTRPDTLMGVTYVAVA 265 Query: 234 A 234 A Sbjct: 266 A 266 >gi|322412300|gb|EFY03208.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 883 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTIGWPDTDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+I E++ ++ V + Sbjct: 559 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGLI-----LEEAESNVAKVAASEAG- 606 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ +Q I L + I+ V+E Sbjct: 607 ---NVTDQWILHNLNETIAKVTE 626 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G+T + F+D+ + M +D S + F T ++ R Sbjct: 100 GQGITRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|256028619|ref|ZP_05442453.1| valyl-tRNA synthetase [Fusobacterium sp. D11] gi|289766537|ref|ZP_06525915.1| valyl-tRNA synthetase [Fusobacterium sp. D11] gi|289718092|gb|EFD82104.1| valyl-tRNA synthetase [Fusobacterium sp. D11] Length = 887 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 68/259 (26%), Positives = 123/259 (47%), Gaps = 18/259 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ P+ +K F+P V G DI+ F F + Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELDLFYPTSTLVTGADIIFFWVARMIMFGMYELK 508 Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 +P K VF HG + + G K+SKSLGN DP+++I+E GVDA+R+ ++ + G+D + Sbjct: 509 KIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQGQDVHFS 568 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400 D L + + AN I N +R V M L+ +D + T + D+ I+S + ++ Sbjct: 569 TDLLG--MGRNFANKIWN-AARFVIMNLESFDVKSVDKTKLDYELVDKWIISRLNETAKD 625 Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL---YVTVEVI 455 +++ ++ + A V + D Y + K L + D+ + L Y+ ++ Sbjct: 626 VKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLTAQYMLWTIL 684 Query: 456 RQLAILLQAFVPKLANKIF 474 Q LL F+P + +I+ Sbjct: 685 EQGLRLLHPFMPFITEEIW 703 >gi|258514376|ref|YP_003190598.1| isoleucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] gi|257778081|gb|ACV61975.1| isoleucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] Length = 927 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 25/254 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 IM VW D+ +++L LD WPADL++ G D R F++ + ++ Sbjct: 524 IMDVWFDSGSSHLAV---LDEKTVWPELSWPADLYLEGSDQHRGWFNSSLSTSVAVTGRA 580 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-----REIACGKD 338 P + V +HGF++ KG K+SKSLGNV+DP++VI+++G D LR ++ ++A ++ Sbjct: 581 PY-RAVLTHGFLVDEKGRKMSKSLGNVVDPLKVIQQLGADILRLWVSSADYKSDLAVSQN 639 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398 +++ + N+ S Y+ M+ E D L R++ Sbjct: 640 ILKQLSEAYRKIRNTCRFLLSNIYDFDPSADQVAYEKMV-------ELDRWALLKLHRLI 692 Query: 399 QEIRENMQNQLIHRALAQV--ISLVSEVDRYFDAQKP--WELKKTNPDR--ASTVLYVTV 452 +++ + H + V +RY D K + +PDR A TVLY+ + Sbjct: 693 EKVLNAYHDYEFHVVYHAIHNFCTVDMSNRYLDIIKDRLYTSPAESPDRRAAQTVLYLIL 752 Query: 453 EVIRQLAILLQAFV 466 + + +L + AF Sbjct: 753 DALVRLLTPVLAFT 766 Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 19/155 (12%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K + Y N H+GH I+ D++ ++ + G D + G D HG I + A Sbjct: 47 KPKFILHDGPPYANGDIHLGHTLNKILKDIIVKYKSMTGYDAPYVPGWDTHGLPIEQQAI 106 Query: 64 NAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDTCR 107 A + VD + FR+ + I ++FIR T H + + Sbjct: 107 KALGINRHEVD--TVVFRNKCKEYALKFVGIQKEEFIRLGVRADWDRSYVTLMPHFEARQ 164 Query: 108 I-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 I ++ +++ +G IYKG ++ E + EV Sbjct: 165 IGVFGEMAKRGYIYKGLKPVYWCASCETALAEAEV 199 >gi|169831567|ref|YP_001717549.1| isoleucyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] gi|254782388|sp|B1I4A3|SYI_DESAP RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|169638411|gb|ACA59917.1| isoleucyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] Length = 930 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 49/265 (18%) Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285 M VW D+ +++ L PD WPAD+++ G D R F++ A ++ P Sbjct: 527 MDVWFDSGSSHWAV---LTQPDYWPDLQWPADMYLEGSDQHRGWFNSSLTTAVAVTGEPP 583 Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 + V +HGF++ +G K+SKSLGNVI+P+EV++E+G D LR ++ C D Sbjct: 584 Y-RAVLTHGFVVDEQGRKMSKSLGNVIEPMEVLKELGADILRLWV-----CSAD------ 631 Query: 345 GLKKRVNADLANGIGNLVSRSVSMI----------LKDYDGMIPTPGAFTESDE------ 388 R + ++ GI +S + I L+D+D T A+TE E Sbjct: 632 ---YRGDLAVSPGILKQMSEAYRKIRNTFRFLLGNLQDFDPDRDTV-AYTELTELDRYAL 687 Query: 389 -SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV------DRYFDAQKPWELKKTNP 441 + V RVL+ RE +Q+ H ++ +S DR + + N Sbjct: 688 LKLHRVTDRVLRAYREYEFHQVYHTLYNYCVTDLSAFYLNVIKDRLYCEPA----RSVNR 743 Query: 442 DRASTVLYVTVEVIRQLAILLQAFV 466 A TVLY ++ + +L + + A+ Sbjct: 744 RGAQTVLYAVLDSLVRLLVPVLAYT 768 Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 19/155 (12%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K + Y N H+G + I+ D++ +F +DG + + G D HG I + A Sbjct: 47 RPKFILHDGPPYANGHIHLGTSLNKILKDIVVKFKSMDGYNAPYVPGWDTHGLPIEQQAI 106 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR----------------HHDTCR 107 + + + FR M + + D R KR H +T + Sbjct: 107 KQLKIKRSAL--SPVEFRRMCREYALKFVDIQRAEFKRLGVRGEWHNPYLTLQPHFETRQ 164 Query: 108 I-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 I ++ +++ +G IYKG S ++ E + EV Sbjct: 165 IEVFGEMAKRGYIYKGLKSVYWCADCETALAEAEV 199 >gi|78043727|ref|YP_359392.1| isoleucyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] gi|123743221|sp|Q3AEP2|SYI_CARHZ RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|77995842|gb|ABB14741.1| isoleucyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] Length = 925 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 7/107 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 IM VW D+ +++ L+ P+ WPADL++ G D R F++ A Sbjct: 523 IMDVWFDSGSSH---AAVLEQPEYWPDLRWPADLYLEGSDQHRGWFNSSLSTAVATRGMA 579 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 P K V +HGF++ KG K+SKSLGNV+DP++VI+E+G D LR ++ Sbjct: 580 PY-KAVLTHGFLVDEKGRKMSKSLGNVVDPLKVIKELGADILRLWVA 625 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAA 62 R K + Y N H+GH ++ D++ +F +DG D + G D HG I +A Sbjct: 47 RPKFILHDGPPYANGDIHMGHVLNKVLKDMIVKFKSMDGYDAPYVPGWDTHGLPIEQRAI 106 Query: 63 QNAGVTTK 70 ++ G+ K Sbjct: 107 KDLGINRK 114 >gi|325684336|gb|EGD26505.1| valine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 879 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 28/200 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+L + +R + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLENQKGEGRVNFVPDRFEGTLERWMENVHDWVISRQLW-WGHRIPAWY 418 Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 D Q ++ W + +T G+ D +++P + Sbjct: 419 NKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFKRYFPTNAL 478 Query: 262 VIGKDILRF--HAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318 V G DI+ F + + + + P V HG I +G K+SKSLGN IDP++VI+ Sbjct: 479 VTGYDIIFFWVSRMIFQSLHFTGERPFDNVVL-HGLIRDEQGRKMSKSLGNGIDPMDVID 537 Query: 319 EVGVDALRYFLVREIACGKD 338 + G DALR+FL+ A G+D Sbjct: 538 KYGADALRWFLLNGTAPGQD 557 Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 24/137 (17%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L R+ R+ G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRYKRMQGYDTLYLPGMDHAGIATQAKVEARLR 98 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 GV+ K FV++ ++ + LD S + F T +K R Sbjct: 99 EQGVSRYDLGRKKFVEKVWEWKDEYANIIKSQWQKLGLSLDYSRERF--TLDKGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCY 124 ++ ++ ++G IY+G Y Sbjct: 157 RVFVQLYNEGLIYRGEY 173 >gi|317152459|ref|YP_004120507.1| valyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] gi|316942710|gb|ADU61761.1| valyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] Length = 888 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 17/259 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D A+++P V G DIL F W A ++ L Sbjct: 450 VLDTWFSSALWPFSTLGWPDK-TPELARYYPTSCLVTGFDILFF----WVARMMMMGLQF 504 Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 ++V H +H KG+K+SKS GNVIDP+++IE+ G DALR+ L A G+D Sbjct: 505 MERVPFHDVYIHALVRDEKGKKMSKSTGNVIDPLDMIEKYGADALRFTLTSFAAMGRDIK 564 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + ++ + N I N +R M L D +P + +D IL V Sbjct: 565 LSEQRIEGYKH--FMNKIWN-AARFAMMNLPDEIPAVPLDQTSSLADTWILHRLEEVKTT 621 Query: 401 IRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 + E + + + SE D Y + KP + +A+T + V+ + Sbjct: 622 VAEATAAYRFNEVAQTLYKFIWSEFCDWYLEMIKPALYGEDEAAKAATQKALWT-VLSET 680 Query: 459 AILLQAFVPKLANKIFDIL 477 +LL P ++ +I+ +L Sbjct: 681 MVLLHPVAPFISQEIWSVL 699 Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 35/173 (20%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA + + D+L RFHR G +VL+ GTD G A QN V Sbjct: 41 SIVIPPPNVTGVLHMGHALNLTLQDILCRFHRQQGRNVLWVPGTDHAG----IATQNV-V 95 Query: 68 TTKVFVDQNSRN-------------------------FRDMADVLDISYDDFIRTTEKRH 102 ++ + SR+ R M +D + + F T + + Sbjct: 96 ERQLKEEGKSRHDLGREKFIERVWEWKQEKGDRILGQIRRMGASVDWTRECF--TFDDQR 153 Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 R ++ ++ +G IYKG Y + R DDEV ++ G Y+ Q+ Sbjct: 154 ARAVREVFVELYRQGLIYKGDYIINWCNRCHTALADDEVEHEPKPGHLYHIQY 206 >gi|297194378|ref|ZP_06911776.1| valyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] gi|197720964|gb|EDY64872.1| valyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] Length = 873 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 71/262 (27%), Positives = 112/262 (42%), Gaps = 23/262 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284 ++ W + +T G+ + D S AKF+P + V G DIL F F L A Sbjct: 453 VLDTWFSSGLWPFSTLGWPEQTD-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 511 Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P + HG + + G+K+SKS GN ++P++ +++ G DALR+ L R G D + Sbjct: 512 PPFHTIALHGMVRDQFGKKMSKSFGNAVNPLDWMDKYGSDALRFTLARGANPGVDVPIGE 571 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR- 402 D ++ N AN I N +R M +G +P + +D ILS ++ + E+ Sbjct: 572 DWVQGSRN--FANKIWN-ATRFALMNGATVEGPLPAAEEMSSTDRWILSRLNKTVAEVDA 628 Query: 403 -------ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 + L H A +V D Y + K P R S V EV+ Sbjct: 629 YYEDYQFAKLSETLFHFAWDEVF------DWYVELSKTTFFAGGEPARVSA--RVLGEVL 680 Query: 456 RQLAILLQAFVPKLANKIFDIL 477 + LL VP + ++ L Sbjct: 681 DVMLRLLHPVVPFVTETLWTAL 702 >gi|260892210|ref|YP_003238307.1| valyl-tRNA synthetase [Ammonifex degensii KC4] gi|260864351|gb|ACX51457.1| valyl-tRNA synthetase [Ammonifex degensii KC4] Length = 882 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 79/276 (28%), Positives = 124/276 (44%), Gaps = 35/276 (12%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 ++ DP ++ W + +T G+ + K F+P + V G+DI+ +W A Sbjct: 443 RVEQDPD-VLDTWFSSALWPFSTLGWPEATPELKF-FYPTSVLVTGRDII----FFWVAR 496 Query: 279 LLSANLP----LP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++ L +P ++VF HG +L G K+SKSLGN +DP+EVIE G D+LR+ LV Sbjct: 497 MIFMGLKFMGDVPFREVFIHGLVLDALGRKMSKSLGNGVDPLEVIESHGADSLRFMLVTG 556 Query: 333 IACGKD---GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESD 387 G D F DG + +N L N SR V M L + + + P G D Sbjct: 557 NTPGNDLRFHFERLDGARNFIN-KLWNA-----SRFVLMNLDEGESL-PRLGEVRLELVD 609 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE------VDRYFDAQKPWELKKTNP 441 I+S LQ++ E + L L + L+ E D Y + K L ++P Sbjct: 610 RWIIS----RLQDVVERVTAYLEEYELGEAARLLYEFIWDEFCDWYIEMAK-LRLYGSDP 664 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + T V V+ LL F+P + +++ L Sbjct: 665 EARRTAQVVLKSVLGTCLKLLHPFIPFVTEEMWHQL 700 >gi|325125475|gb|ADY84805.1| Valine-tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 879 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 28/200 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+L + +R + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLENQKGEGRVNFVPDRFEGTLERWMENVHDWVISRQLW-WGHRIPAWY 418 Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 D Q ++ W + +T G+ D +++P + Sbjct: 419 NKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFKRYFPTNAL 478 Query: 262 VIGKDILRF--HAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318 V G DI+ F + + + + P V HG I +G K+SKSLGN IDP++VI+ Sbjct: 479 VTGYDIIFFWVSRMIFQSLHFTGERPFDNVVL-HGLIRDEQGRKMSKSLGNGIDPMDVID 537 Query: 319 EVGVDALRYFLVREIACGKD 338 + G DALR+FL+ A G+D Sbjct: 538 KYGADALRWFLLNGTAPGQD 557 Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 24/137 (17%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L R+ R+ G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRYKRMQGYDTLYLPGMDHAGIATQAKVEARLR 98 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 GV+ + FV++ ++ + LD S + F T +K R Sbjct: 99 EQGVSRYDLGREKFVEKVWEWKDEYANIIKSQWQKLGLSLDYSRERF--TLDKGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCY 124 ++ ++ ++G IY+G Y Sbjct: 157 RVFVQLYNEGLIYRGEY 173 >gi|257463901|ref|ZP_05628287.1| valyl-tRNA synthetase [Fusobacterium sp. D12] gi|317061430|ref|ZP_07925915.1| valyl-tRNA synthetase [Fusobacterium sp. D12] gi|313687106|gb|EFS23941.1| valyl-tRNA synthetase [Fusobacterium sp. D12] Length = 887 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 14/256 (5%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ P+ +K ++P V G DI+ F F L Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELELYYPTSTLVTGADIIFFWVARMIMFGLYEMK 508 Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 +P + VF HG + G K+SKSLGN DP+++IE+ G DA+R+ ++ + G+D + Sbjct: 509 DIPFRNVFFHGIVRDDLGRKMSKSLGNSPDPLDLIEQYGADAIRFSMIYNTSQGQDVRFS 568 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400 + L+ + + AN I N SR V M L+D+D + DE ILS + Sbjct: 569 EKLLE--MGRNFANKIWN-ASRFVMMNLEDFDINTFDEKEVKYELVDEWILSRLQETAKA 625 Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 + + N + A V + D Y + K + T YV ++ Sbjct: 626 VETRLSNFQLDEAAKAVYEFLRGDFCDWYVEIAKIRLYNLEDVQSKRTAQYVLWSMLEAG 685 Query: 459 AILLQAFVPKLANKIF 474 LL F+P ++ +I+ Sbjct: 686 LRLLHPFMPYISEEIW 701 >gi|313123426|ref|YP_004033685.1| valyl-tRNA synthetase (valine--tRNA ligase) (valrs) [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279989|gb|ADQ60708.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 879 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 28/200 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+L + +R + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLENQKGEGRVNFVPDRFEGTLERWMENVHDWVISRQLW-WGHRIPAWY 418 Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 D Q ++ W + +T G+ D +++P + Sbjct: 419 NKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFKRYFPTNAL 478 Query: 262 VIGKDILRF--HAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318 V G DI+ F + + + + P V HG I +G K+SKSLGN IDP++VI+ Sbjct: 479 VTGYDIIFFWVSRMIFQSLHFTGERPFDNVVL-HGLIRDEQGRKMSKSLGNGIDPMDVID 537 Query: 319 EVGVDALRYFLVREIACGKD 338 + G DALR+FL+ A G+D Sbjct: 538 KYGADALRWFLLNGTAPGQD 557 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 24/137 (17%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L R+ R+ G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRYKRMQGYDTLYLPGMDHAGIATQAKVEARLR 98 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 GV+ K FV++ ++ + LD S + F T +K R Sbjct: 99 EQGVSRYDLGRKKFVEKVWEWKDEYANIIKSQWQKLGLSLDYSRERF--TLDKGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCY 124 ++ ++ ++G IY+G Y Sbjct: 157 RVFVQLYNEGLIYRGEY 173 >gi|256850916|ref|ZP_05556305.1| valyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260661130|ref|ZP_05862044.1| valyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|282934172|ref|ZP_06339450.1| valine--tRNA ligase [Lactobacillus jensenii 208-1] gi|256615978|gb|EEU21166.1| valyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260548067|gb|EEX24043.1| valyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|281301786|gb|EFA94052.1| valine--tRNA ligase [Lactobacillus jensenii 208-1] Length = 879 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 39/268 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ +K L ++ + ER ++ + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLAEKALENQKTAGKIDFVPERFSQTFEQWMENVHDWVISRQLW-WGHRIPAWY 418 Query: 222 DDPQYIMYV--------------------WIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 + MYV W + +T G+ D +++P + Sbjct: 419 NKETGEMYVGEEAPKDIENWRQDEDVLDTWFSSALWPFSTLGWPDENAADFKRYFPTNAL 478 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315 V G DI+ F W + ++ +L K+ V HG I +G K+SKSLGN IDP++ Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFTKQKPFDHVVLHGLIRDEQGRKMSKSLGNGIDPMD 534 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373 VI++ G DALR+FL+ A G+D + + N N I N SR V M L Sbjct: 535 VIDKYGADALRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPSDAK 591 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F +D+ I + ++E+ Sbjct: 592 PAHMPDVAKFDLADKWIFDRLNHTVKEV 619 Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 29/170 (17%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ I D L R R+ G D L+ G D G IA A+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTSIQDTLIRLKRMQGYDTLYLPGMDHAG--IAMQAKVEAK 96 Query: 68 TTKVFVDQNS-------RNFRDMAD---------------VLDISYDDFIRTTEKRHHDT 105 K +D++ + D D LD S + F T +K Sbjct: 97 LRKQGLDRHQMGREKFVKQVWDWKDEYANIIKSQWAKLGLSLDYSRERF--TLDKGLSKA 154 Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQH 154 R ++ ++ ++G IY+G Y + + E +D EV D G +Y+ ++ Sbjct: 155 VRKVFVQLYNEGLIYRGQYIINWDPKLETALSDIEVIHQDDKGAFYHVKY 204 >gi|148243515|ref|YP_001228672.1| valyl-tRNA synthetase [Synechococcus sp. RCC307] gi|147851825|emb|CAK29319.1| Valyl-tRNA synthetase [Synechococcus sp. RCC307] Length = 918 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 76/294 (25%), Positives = 122/294 (41%), Gaps = 20/294 (6%) Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266 L +R F +I D + + W + +T G+ D +++P L V G D Sbjct: 451 LEKARAQFGAEAQIEQD-EDALDTWFSSGLWPFSTLGWPDQNAADLQRWYPTSLLVTGFD 509 Query: 267 ILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323 I+ F + A + P V+ HG + K+SKS GN IDP+ +I+ G D Sbjct: 510 IIFFWVARMTMMAGAFTGKTPF-ADVYIHGLVRDENNRKMSKSAGNGIDPLLLIDRYGAD 568 Query: 324 ALRYFLVREIA-CGKDGFYDKDGLKKRVNA-DLANGIGNLVSRSVSMILKDYDGMIPT-- 379 ALR+ LVRE+A G+D D D + + N + + L + G P Sbjct: 569 ALRFALVREVAGAGQDIRLDYDRKSDTSGTVEASRNFANKLWNATRFALMNLGGETPASL 628 Query: 380 ----PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEV-DRYFDAQKP 433 P A +D ILS +RV +E + + A + +EV D Y + K Sbjct: 629 GKPDPAALQLADRWILSRLARVNRETAARYSSYGLGEAAKGLYEFAWNEVCDWYLELSKR 688 Query: 434 WELKKTNPDRAS-----TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 NP + T V +V+ +L +L +P L+ +++ L AD+ Sbjct: 689 RLNPGENPSAEALADQRTARQVLAQVMEELQRMLHPLMPHLSEELWHALTGADD 742 >gi|147921041|ref|YP_685149.1| isoleucyl-tRNA synthetase [uncultured methanogenic archaeon RC-I] gi|121685571|sp|Q0W720|SYI_UNCMA RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|110620545|emb|CAJ35823.1| isoleucyl-tRNA synthetase [uncultured methanogenic archaeon RC-I] Length = 1104 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 75/266 (28%), Positives = 122/266 (45%), Gaps = 25/266 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 I VW D+ T + D +WPAD V G D R F++ + Sbjct: 569 IFDVWFDSAVASWATLHFPGRKD--LMDWWPADFIVEGHDQTRGWFYSQLGAGMVGFGKA 626 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P V HGF L G+K+SKSLGNV+ P +V+E++G D LR +++ + A +D + Sbjct: 627 PY-NGVCMHGFTLDETGKKMSKSLGNVVAPEDVVEKLGADTLRLYVLSQNAPWEDLSFSW 685 Query: 344 DGLKKRVNADLANGIGNLVSR--SVSMILKDYDGMIPT----PGAFTESDESILSVCSRV 397 + N + A I V R M+L +D T G+ D ILS V Sbjct: 686 EECG---NINRAINIFWNVYRFPLPYMVLDKFDPAKVTLESVKGSLRVEDRWILSKLQAV 742 Query: 398 LQEIRENMQNQLIHRALAQVISLVSE-VDRYF---DAQKPWELKKTNPDR--ASTVLYVT 451 ++++ M +HRA +IS + E + R++ ++ W ++ +PD+ A VLY T Sbjct: 743 IKDVDTYMATYELHRATRSIISFILEDLSRWYVQLARERTW-VEADDPDKLAAYRVLYDT 801 Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477 + + L+ F P +A +++ L Sbjct: 802 LVTTVK---LIAPFTPYIAERMYQNL 824 >gi|182413823|ref|YP_001818889.1| valyl-tRNA synthetase [Opitutus terrae PB90-1] gi|177841037|gb|ACB75289.1| valyl-tRNA synthetase [Opitutus terrae PB90-1] Length = 910 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 98/423 (23%), Positives = 168/423 (39%), Gaps = 77/423 (18%) Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189 L +EAY N+ + AD P++ E ++ R ++ + + H +F Sbjct: 336 LEEEAYSNNVGYSERAD--------VPIEPRLTEQWWLRYPKIEEAKAAVRDGHIKF--H 385 Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------------DDPQY- 226 ER ++V ++D +SR+ + WG +IP DPQ Sbjct: 386 PERWSKVYLHWLENIQDWCISRQLW-WGHRIPVWYRKGADRSDPKNWHVSVDGPADPQNW 444 Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAF 278 ++ W + T G+ D + +A F +P V G DI+ +W A Sbjct: 445 EQEDDVLDTWASSWLWPFATMGWPDQAEMKQAGFDYFYPTSTLVTGPDII----FFWVAR 500 Query: 279 LLSANLP-----------LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325 ++ A L +P + V+ G I +G K+SKSLGN DP+ +I++ G D L Sbjct: 501 MIMAGLEFVRPGESLERRIPFRDVYFTGIIRDQQGRKMSKSLGNSPDPLVLIDKYGADGL 560 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS-RSVSMILKDYDGMIP-----T 379 R+ ++ G+D + +D ++ N N + N R +S D + Sbjct: 561 RFGIISIAPQGQDIRFQEDRIEGGKN--FCNKLWNACRFRQMSGEAGDNASLAAIAARLE 618 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK 437 P F D +IL S E+ + A+ + S D Y + K K Sbjct: 619 PAKFDADDHAILDRLSATTAELERCFREFEFSAAVQALYSFFWGDFCDWYVEVSK---AK 675 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497 + + L + V+RQ +LL FVP + +++ +L A +S+D R KPG Sbjct: 676 MQAAETKANCLAIQDVVLRQTLLLLHPFVPFITEELWGLLGYAGN----ESVDAR-KPGA 730 Query: 498 MLH 500 + Sbjct: 731 FIQ 733 >gi|288553603|ref|YP_003425538.1| valyl-tRNA synthetase [Bacillus pseudofirmus OF4] gi|288544763|gb|ADC48646.1| valyl-tRNA synthetase [Bacillus pseudofirmus OF4] Length = 880 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 72/283 (25%), Positives = 121/283 (42%), Gaps = 37/283 (13%) Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270 G + P DP+ ++ W + +T G+ D +F+ ++ V G DI+ F Sbjct: 432 GHEAPKDPENWKQDEDVLDTWFSSALWPFSTMGWPDTNAADYERFYTTNVLVTGYDIIFF 491 Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 W + ++ L K V HG + +G K+SKSLGN +DP++VI++ G DA Sbjct: 492 ----WVSRMIFQGLEFTGKRPFNDVLIHGLVRDSEGRKMSKSLGNGVDPMDVIDKYGADA 547 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380 LR+FL + G D + + ++ N GN + + L + DG+ I Sbjct: 548 LRFFLSTGSSPGNDLRFYWEKVESTWN------FGNKIWNASRFALMNMDGLTYDEIDLS 601 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE------VDRYFDAQKPW 434 G + +D+ IL+ LQE E++ + +V L+ D Y + K Sbjct: 602 GEKSIADKWILT----RLQETTEDVTRLIDAYEFGEVGRLLYNFIWDDFCDWYIEMAKL- 656 Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 L N + T V V+ Q LL +P + +I+ L Sbjct: 657 PLNSDNEEAKRTTRSVLAYVLDQTMRLLHPIMPFITEEIWQHL 699 Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D+L+R R+ G D L+ G D G IA A+ G Sbjct: 43 SIVIPPPNVTGKLHLGHAWDTTLQDILSRVKRMQGYDTLWLPGMDHAG--IATQAKVEGK 100 Query: 68 TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107 + V D F + + Y DFIR T ++ Sbjct: 101 LREEGVSRYDLGREKFLEKSWEWKEEYADFIRNQWSKLGLSLDYSRERFTLDEGLSKAVN 160 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ K+ +KG IY+G Y W A + + +Y+ G +Y+ + Sbjct: 161 EVFVKLYEKGLIYRGEYIINWDPQTKTALSDIEVIYQDVQGAFYHMNY 208 >gi|269125779|ref|YP_003299149.1| valyl-tRNA synthetase [Thermomonospora curvata DSM 43183] gi|268310737|gb|ACY97111.1| valyl-tRNA synthetase [Thermomonospora curvata DSM 43183] Length = 883 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 80/302 (26%), Positives = 129/302 (42%), Gaps = 40/302 (13%) Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240 + D +SR+ + WG +IP DP ++ W + L+ Sbjct: 422 MHDWCISRQLW-WGHRIPVWYGPNGEVCCPGPDEEPPAGWTQDPD-VLDTWFSSALWPLS 479 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL-PKKVFS-HGFILH 298 T G+ D +F+P + V G DIL F F L A + P KV + HG + Sbjct: 480 TLGWPDR-TADLERFYPTSVLVTGYDILFFWVARMMMFGLYAMDGVEPFKVIALHGMVRD 538 Query: 299 K-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357 + G+K+SKS GNV+DP+E IE G DA R+ L+R G D ++ + N N Sbjct: 539 QYGKKMSKSFGNVVDPLEWIERYGADATRFTLLRGANPGGDVPIAEEWAQGSRN--FCNK 596 Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 + N +R M G +P +++D ILS V+ E+ +M++ +A + Sbjct: 597 LWN-ATRFALMNGAHVRGELPQ--ELSDADAWILSRLQHVIAEVDRHMEDFEFAKACEAL 653 Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + D Y + K + +RA V EV+ +L LL VP + +++ Sbjct: 654 YHFAWDEVCDWYVELAK----VQLQDERAEATRRVLGEVLDKLLRLLHPIVPFVTEELWT 709 Query: 476 IL 477 L Sbjct: 710 SL 711 >gi|257058592|ref|YP_003136480.1| valyl-tRNA synthetase [Cyanothece sp. PCC 8802] gi|256588758|gb|ACU99644.1| valyl-tRNA synthetase [Cyanothece sp. PCC 8802] Length = 909 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 33/318 (10%) Query: 184 PEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYVWIDALTNY 238 P + + E NE+ F+ + +D ++ + +G I + DP ++ W + Sbjct: 419 PAWYVISETNNEITDHTPFIVADNEDEAIKKAQEQYGENITLEQDPD-VLDTWFSSGLWP 477 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFI 296 +T G+ +N + +++P V G DI+ F + A + +P K V+ HG + Sbjct: 478 FSTLGWPENTE-DLTRYYPTSTLVTGFDIIFFWVARMTMMAGYFTDQIPF-KDVYIHGLV 535 Query: 297 L-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKD---GFYDKDGLKKRVN 351 G+K+SKS N IDP+ +IE G DALRY L++E+A G+D + K + V Sbjct: 536 RDENGKKMSKSANNGIDPLILIENYGTDALRYTLIKEVAGAGQDISLQYNRKTDESESVE 595 Query: 352 A--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR--------VLQEI 401 A + AN + N +R V M L+ TP D L +C R ++Q+ Sbjct: 596 ASRNFANKLWN-AARFVMMNLQGN-----TPKTLGVPDREKLELCDRWILSRFHQLVQQT 649 Query: 402 RENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459 R ++N + A + + D Y + K K +N + V+ Sbjct: 650 RNYVENYGLGEAAKGLYEFIWGDFCDWYIELVKTRLWKDSNTESRLVAQQTLAYVLDNTL 709 Query: 460 ILLQAFVPKLANKIFDIL 477 LL F+P + +I+ L Sbjct: 710 RLLHPFMPHITEEIWQTL 727 Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 S I PN H+GHA+E + DVL R+HR+ G + L GTD Sbjct: 43 SIVIPPPNVTGSLHMGHAFEDCLMDVLVRYHRMCGHNTLCLPGTD 87 >gi|254302263|ref|ZP_04969621.1| valine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322455|gb|EDK87705.1| valine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 887 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 22/261 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ P+ +K F+P V G DI+ F F + Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELDLFYPTSTLVTGADIIFFWVARMIMFGMYELK 508 Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 +P K VF HG + + G K+SKSLGN DP+++I+E GVDA+R+ ++ + G+D + Sbjct: 509 KIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEFGVDAIRFSMIYNTSQGQDVHFS 568 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400 D L + + AN I N +R V M L+ +D + T + D+ I+S + ++ Sbjct: 569 TDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISRLNETAKD 625 Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS-----TVLYVTVE 453 +++ ++ + A V + D Y + K ++ N D T Y+ Sbjct: 626 VKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAK---IRLYNDDEDKKISKLTAQYMLWT 682 Query: 454 VIRQLAILLQAFVPKLANKIF 474 ++ Q LL F+P + +I+ Sbjct: 683 ILEQGLRLLHPFMPFITEEIW 703 >gi|326935721|ref|XP_003213916.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like, partial [Meleagris gallopavo] Length = 416 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 60/266 (22%), Positives = 108/266 (40%), Gaps = 30/266 (11%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ AD AR+ RL + L+ GTDE+G A Sbjct: 19 VLITSALPYVNNVPHLGNIIGCVLSADAFARYCRLRNWNTLYVCGTDEYGTATETKAVEE 78 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ DIS+D F RTT + + +++++ +G + + Sbjct: 79 GLTPRQICDKYHAVHADIYRWFDISFDCFGRTTTPQQTAISQDIFQRLQARGFVLQDTVQ 138 Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161 + + + D V Y+ A G + + +E Sbjct: 139 QLHCAGCQRFLADRFVEGICPFCAYQEARGDQCDKCGKLINAVELKTPRCKLCGGSPAVR 198 Query: 162 -EEGYFFRLSAYQDKLLSYYESH-PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 F L +++L + E+ R S+++ GL+ ++R WG Sbjct: 199 PTRHLFLDLPKLEERLQPWLENCWATGNWTANARYITRSWIRDGLRPRCITRD-LQWGTP 257 Query: 220 IPDDP--QYIMYVWIDALTNYLTTTG 243 +P D + YVW DA YL+ T Sbjct: 258 VPLDGFRDKVFYVWFDAPIGYLSITA 283 >gi|300788561|ref|YP_003768852.1| valyl-tRNA synthetase [Amycolatopsis mediterranei U32] gi|299798075|gb|ADJ48450.1| valyl-tRNA synthetase [Amycolatopsis mediterranei U32] Length = 873 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 73/265 (27%), Positives = 117/265 (44%), Gaps = 21/265 (7%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAF-- 278 DP ++ W + ++T G+ P S+ AKF+P + G DIL F + F Sbjct: 447 DPD-VLDTWFSSGLWPMSTLGW---PSSSEDLAKFYPTSVLSTGYDILFFWVVRMMMFGV 502 Query: 279 -LLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 + P V+ HG I +G+K+SKS GNVIDP+E ++ G DA R+ L R G Sbjct: 503 HQMDGKQPF-DHVYLHGLIRDAQGKKMSKSRGNVIDPLEWMDAYGADATRFTLARGANPG 561 Query: 337 KD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 D D+ R + + N ++ M +P+ G TE+D IL Sbjct: 562 ADMALADEWAAGSR---NFCTKLWN-ATKFAMMNGASVAAPLPSAGELTEADRWILGRLG 617 Query: 396 RVLQEIR---ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 ++ E+ E+ Q + AL Q + D Y + K +L + + RA+ V Sbjct: 618 ALVSEVDGLFEDFQFAKVAGALYQ-FTWNELCDWYLELAKV-QLYQGDDARAAATRSVLG 675 Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477 V+ + LL F+P + K++ L Sbjct: 676 HVLDTVLRLLHPFIPFITEKLWTAL 700 >gi|297529198|ref|YP_003670473.1| valyl-tRNA synthetase [Geobacillus sp. C56-T3] gi|297252450|gb|ADI25896.1| valyl-tRNA synthetase [Geobacillus sp. C56-T3] Length = 880 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 130/309 (42%), Gaps = 47/309 (15%) Query: 204 LKDLSLSRKTFDWGIKIP------------------------DDPQYIMYVWIDALTNYL 239 ++D +SR+ + WG +IP DP ++ W + Sbjct: 403 IRDWCISRQLW-WGHRIPAWYHKETGEIYVDHEPPKDIENWEQDPD-VLDTWFSSALWPF 460 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL 297 +T G+ D +++P D+ V G DI+ F + + + P K V HG + Sbjct: 461 STMGWPDVESPDYKRYYPTDVLVTGYDIIFFWVSRMIFQGLEFTGKRPF-KDVLIHGLVR 519 Query: 298 H-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 +G K+SKSLGN +DP++VI++ G DALRYFL + G+D + + ++ N AN Sbjct: 520 DAQGRKMSKSLGNGVDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKVEATWN--FAN 577 Query: 357 GIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 I N + L + GM + G T +D IL+ + + + + + Sbjct: 578 KIWN----ASRFALMNMGGMTYEELDLSGEKTVADHWILTRLNETIDTVTKLAEKYEFGE 633 Query: 413 ALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPK 468 A + + + + D Y + K L D A+ T V V+ LL F+P Sbjct: 634 AGRTLYNFIWDDLCDWYIEMAK---LPLYGDDEAAKKTTRSVLAYVLDNTMRLLHPFMPF 690 Query: 469 LANKIFDIL 477 + +I+ L Sbjct: 691 ITEEIWQNL 699 Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 23/167 (13%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN + H+GHA++ + D++ R R+ G DVL+ G D G K+ + + Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLR 102 Query: 64 NAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 G++ T + ++ + + R L + D+ R T ++ R Sbjct: 103 QQGLSRYDLGREKFLEETWKWKEEYAGHIRSQWAKLGLGL-DYTRERFTLDEGLSKAVRE 161 Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G Y W + A + + VYK G Y+ ++ Sbjct: 162 VFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVVYKEVKGALYHLRY 208 >gi|315504173|ref|YP_004083060.1| valyl-tRNA synthetase [Micromonospora sp. L5] gi|315410792|gb|ADU08909.1| valyl-tRNA synthetase [Micromonospora sp. L5] Length = 872 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 74/261 (28%), Positives = 116/261 (44%), Gaps = 21/261 (8%) Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA-NL 284 ++ W + +T G+ + PD AKF+P + V G DIL F F L A + Sbjct: 450 VLDTWFSSGLWPFSTLGWPERTPD--LAKFYPTSVLVTGYDILFFWVARMMMFGLYAMDG 507 Query: 285 PLPKKVFS-HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 P V + HG + + G+K+SKS GNV+DP++ I+ G DA R+ L R G+D Sbjct: 508 VQPFDVVALHGMVRDEHGKKMSKSFGNVVDPLDWIDRFGADATRFTLARGANPGQDVPVS 567 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402 ++ + N N + N +R + DG +P G + D ILS + V E+ Sbjct: 568 EEWCQGSRN--FCNKLWN-ATRFALLNGAHTDGPLPAAGDLSTVDRWILSRLAHVTAEVD 624 Query: 403 ENMQNQLIHRALAQVISLVSE------VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 E + A+V L+ D Y + KP L + P A V V+ Sbjct: 625 EQFEAY----EFAKVCDLLYHFAWDDVCDWYVELSKP-VLAEGGP-AADATRRVLGHVLD 678 Query: 457 QLAILLQAFVPKLANKIFDIL 477 QL LL +P + ++++ L Sbjct: 679 QLLRLLHPVIPFVTDELWAAL 699 >gi|269837467|ref|YP_003319695.1| leucyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] gi|269786730|gb|ACZ38873.1| leucyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] Length = 824 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 11/194 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K Y T YP+ HIGH Y M +D ARF R+ G +VLF G D G AA Sbjct: 40 RPKWYHLTMYPYPSGDLHIGHWYAMAPSDAAARFKRMSGYNVLFPMGFDAFGLPAENAAI 99 Query: 64 NAGVT----TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 G+ T +++ R R M + D S + + T ++ + + + G Sbjct: 100 TRGIHPFKWTMDNIERMRRQLRSMGAMFDWSRE--VVTCLPDYYRWNQWFFLQFYKNGLA 157 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 Y+ W+ +D+ +++V G + + + E +FFR++ Y ++LL++ Sbjct: 158 YRASAPVWWCPKDQTVLANEQVIDGRCERCGTEVYR----RDLEQWFFRITKYAEELLNF 213 Query: 180 YE-SHPEFILPIER 192 PE ++ ++R Sbjct: 214 DGIEWPERVMTMQR 227 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 36/243 (14%) Query: 246 DNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGF 295 D P D +W P D + G + H +Y F LL + P ++F+ G Sbjct: 523 DRPFDPDAIAYWTPVDQYTGGIEHATMHLMYARFFTKALRDLGLLPFDEPF-LRLFNQGI 581 Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 IL + EK+SKS GNV+DP +++ ++G D +R +L+ + G + G+ Sbjct: 582 ILGEDNEKMSKSRGNVVDPDDLVAQLGADTVRLYLMFIAPWEQGGPWSSRGIA------- 634 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414 G+ V R +++ + D P G E+ + + R ++ + E++ + + Sbjct: 635 --GVERFVRRVWTIVTETAD--TPADGPDGEAAHKLRKITHRTIKAVTEDISTFQFNTMV 690 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 A+++ V+E+ D E+ +T R E +R L +LL P LA +++ Sbjct: 691 ARLMEFVNELSSLRDT----EVVRTEAWR---------EAMRTLVLLLAPSTPYLAEELW 737 Query: 475 DIL 477 + L Sbjct: 738 ERL 740 >gi|297205794|ref|ZP_06923189.1| valine--tRNA ligase [Lactobacillus jensenii JV-V16] gi|297148920|gb|EFH29218.1| valine--tRNA ligase [Lactobacillus jensenii JV-V16] Length = 883 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 39/268 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ +K L ++ + ER ++ + D +SR+ + WG +IP Sbjct: 364 WFVKMKPLAEKALENQKTAGKIDFVPERFSQTFEQWMENVHDWVISRQLW-WGHRIPAWY 422 Query: 222 DDPQYIMYV--------------------WIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 + MYV W + +T G+ D +++P + Sbjct: 423 NKETGEMYVGEEAPKDIENWRQDEDVLDTWFSSALWPFSTLGWPDENAADFKRYFPTNAL 482 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315 V G DI+ F W + ++ +L K+ V HG I +G K+SKSLGN IDP++ Sbjct: 483 VTGYDIIFF----WVSRMIFQSLHFTKQKPFDHVVLHGLIRDEQGRKMSKSLGNGIDPMD 538 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373 VI++ G DALR+FL+ A G+D + + N N I N SR V M L Sbjct: 539 VIDKYGADALRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPSDAK 595 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F +D+ I + ++E+ Sbjct: 596 PAHMPDVAKFDLADKWIFDRLNHTVKEV 623 Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 29/170 (17%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ I D L R R+ G D L+ G D G IA A+ Sbjct: 43 SIVIPPPNVTGKLHLGHAWDTSIQDTLIRLKRMQGYDTLYLPGMDHAG--IAMQAKVEAK 100 Query: 68 TTKVFVDQNS-------RNFRDMAD---------------VLDISYDDFIRTTEKRHHDT 105 K +D++ + D D LD S + F T +K Sbjct: 101 LRKQGLDRHQMGREKFVKQVWDWKDEYANIIKSQWAKLGLSLDYSRERF--TLDKGLSKA 158 Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQH 154 R ++ ++ ++G IY+G Y + + E +D EV D G +Y+ ++ Sbjct: 159 VRKVFVQLYNEGLIYRGQYIINWDPKLETALSDIEVIHQDDKGAFYHVKY 208 >gi|116749515|ref|YP_846202.1| leucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] gi|166231649|sp|A0LK15|SYL_SYNFM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|116698579|gb|ABK17767.1| leucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] Length = 829 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 82/185 (44%), Gaps = 10/185 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK Y+ YP+ + H+GH I DV+ARF R+ G +VL G D G AA Sbjct: 32 REKFYLLEMFPYPSGRIHMGHVRNYSIGDVVARFLRMRGYNVLHPMGWDAFGMPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 A + +N R L SYD +F T + ++ ++ + K+ +KG Y Sbjct: 92 KAKTHPARWTYENIAYMRSQLKQLGFSYDWSREFA-TCDVSYYRWEQLFFLKMYEKGLAY 150 Query: 121 K-GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 K Y W N ++V GA + PV E E +FF+++ Y ++LL Y Sbjct: 151 KRSAYVNWCGTCLTVLAN-EQVEGGACWRC----DQPVVQKEMEQWFFKITDYVEELLDY 205 Query: 180 YESHP 184 P Sbjct: 206 THRLP 210 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/250 (23%), Positives = 113/250 (45%), Gaps = 38/250 (15%) Query: 243 GYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSH 293 G LD P K K+W P D ++ G + H +Y F+ L + P + + + Sbjct: 520 GPLDLP---KVKYWMPVDQYIGGIEHAVLHLLYSRFFVKVLRDMGALEVDEPF-RNLLTQ 575 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G ++ G K+SKS GNV+DP ++I+ G D +R F + KD + G++ Sbjct: 576 GMVIKDGAKMSKSKGNVVDPDDMIKAYGADTVRLFCLFASPPEKDLEWSDQGVE------ 629 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSVCSRVLQEIRENMQNQ 408 G +SR ++ + D + P GA E E++ + ++++ E+++++ Sbjct: 630 ---GSFRFLSRIWRLVSDNLDALRSAPRHNGGGALPEPLEALHRKTHQTIKKVTEDIRDR 686 Query: 409 L-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 + A+A ++ LV+++ + + RA + V E + L +L+ P Sbjct: 687 FHFNTAIAAIMELVNQIYQVVEGG----------SRAGNIWPVVKEAVEALILLVSPMAP 736 Query: 468 KLANKIFDIL 477 +A +I+ L Sbjct: 737 HIAEEIWHEL 746 >gi|29377395|ref|NP_816549.1| valyl-tRNA synthetase [Enterococcus faecalis V583] gi|227554378|ref|ZP_03984425.1| valyl-tRNA synthetase [Enterococcus faecalis HH22] gi|75541540|sp|Q82ZW6|SYV_ENTFA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|29344862|gb|AAO82619.1| valyl-tRNA synthetase [Enterococcus faecalis V583] gi|227176497|gb|EEI57469.1| valyl-tRNA synthetase [Enterococcus faecalis HH22] gi|315576283|gb|EFU88474.1| valyl-tRNA synthetase [Enterococcus faecalis TX0309B] gi|315582775|gb|EFU94966.1| valyl-tRNA synthetase [Enterococcus faecalis TX0309A] Length = 880 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 85/345 (24%), Positives = 144/345 (41%), Gaps = 45/345 (13%) Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F ++ +K + E+ EF P R N+ + D +SR+ + WG +IP Sbjct: 363 WFVKMGPLAEKAMKNQETEDAVEFYPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419 Query: 222 -------------DDP---------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 ++P ++ W + +T G+ + +++P Sbjct: 420 WYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPNEASEDYQRYFPTS 479 Query: 260 LHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316 V G DI+ F + + + + P + V HG I +G K+SKSLGN IDP++V Sbjct: 480 TLVTGYDIIFFWVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDV 538 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 IE+ G DALR+FL A G+D + + + N N I N SR V M + +GM Sbjct: 539 IEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGM 592 Query: 377 ----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G T +D IL+ + + + E A Q+ + + + D Y + Sbjct: 593 TAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEM 652 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 K L N T + V + Q+ LL +P + +I++ Sbjct: 653 SKE-ILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|284053184|ref|ZP_06383394.1| valyl-tRNA synthetase [Arthrospira platensis str. Paraca] gi|291568160|dbj|BAI90432.1| valyl-tRNA synthetase [Arthrospira platensis NIES-39] Length = 908 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 72/291 (24%), Positives = 126/291 (43%), Gaps = 25/291 (8%) Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA 272 +F G+K+ DP ++ W + +T G+ + ++P + G DI+ F Sbjct: 453 SFGEGVKLQQDPD-VLDTWFSSGLWPFSTLGWPEK-TADLQTYYPTNTLSTGFDIIFF-- 508 Query: 273 IYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325 W A + + +P + V+ HG IL G+K+SKS GN IDP+ +I++ G DAL Sbjct: 509 --WVARMTMMGGYFTDKMPF-QTVYIHGLILDENGKKMSKSAGNGIDPLLLIDKYGTDAL 565 Query: 326 RYFLVRE-IACGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIP----T 379 RY L+RE I G+D + D K + + + + N + + +L + G P T Sbjct: 566 RYTLMREVIGAGQDIRLEYDRSKDESPSVEASRNFTNKLWNAARFVLMNLKGQTPAQLGT 625 Query: 380 PG--AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWE 435 P SD ILS ++ +++ + M + A + + D Y + K + Sbjct: 626 PNLEELELSDRWILSRFNQTVKQTCDYMNAYSLGEAAKGLYEFIWGDFCDWYIELAK-YR 684 Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486 L+ V ++ + LL F+P + +I+ L E C Sbjct: 685 LQGDGGVSQKVAQQVLAYILEGILKLLHPFMPHITEEIWHTLTQTGEQDCL 735 Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust. Identities = 14/32 (43%), Positives = 21/32 (65%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 H+GHA+ + D L R+HR+ G + L+ GTD Sbjct: 56 HMGHAFNNSLIDALIRYHRMRGYNTLYLPGTD 87 >gi|94986050|ref|YP_605414.1| valyl-tRNA synthetase [Deinococcus geothermalis DSM 11300] gi|94556331|gb|ABF46245.1| valyl-tRNA synthetase [Deinococcus geothermalis DSM 11300] Length = 925 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 40/240 (16%) Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 PV+ + +F + +++L+ ++ I P ER +V G++D ++SR+ + Sbjct: 377 PVEPIVSTQWFVHMKPLAERVLAGLDAGEIHITP-ERYTKVNRDWLLGIRDWNISRQLW- 434 Query: 216 WGIKIP----------------------DDPQY----------IMYVWIDALTNYLTTTG 243 WG +IP DP+Y + W + +T G Sbjct: 435 WGHQIPAWYDEEGNVYVPDLENPDLDCDQDPRYAHLNLRRDPDVFDTWFSSNLWPFSTLG 494 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKG 300 + D KF+P + V G DIL F + + L+ P V HG L KG Sbjct: 495 WPDTDSEDYRKFYPTQVLVTGYDILFFWVARMEMAGYALTGEAPF-STVMLHGLYLDAKG 553 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKS GN IDP+E+ +E GVDA R+ G+D +D ++ N AN + N Sbjct: 554 QKMSKSKGNGIDPLELFDEYGVDACRFAFTSLATGGQDIRHDPRRFEQGRN--FANKLWN 611 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 11/56 (19%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76 H+GHA + + D L R+ R+ G + L+ GTD +AG++T+V V++ Sbjct: 68 HLGHALDNTLIDTLIRYKRMQGFEALYLPGTD-----------HAGISTQVVVERQ 112 >gi|282900149|ref|ZP_06308106.1| Valyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii CS-505] gi|281195031|gb|EFA69971.1| Valyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii CS-505] Length = 1051 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 91/392 (23%), Positives = 162/392 (41%), Gaps = 66/392 (16%) Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYY--ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213 PV+ + +F ++ DK L + E+ PEF+ +R +V L+D +SR+ Sbjct: 370 PVEPLLSTQWFVKIRPLADKTLEFLDQENSPEFV--PQRWGKVYRDWLVNLRDWCISRQL 427 Query: 214 FDWGIKIP--------------DDPQYIMYVWIDALTNY----LTTTGYLDNPD------ 249 + WG +IP P ++ + ++AL + +PD Sbjct: 428 W-WGHQIPAWYAVSETGGEITDSTPYFVAHNEMEALEKARALGCENVQLIQDPDVLDTWF 486 Query: 250 ----------GSKAK------FWPADLHVIGKDILRFHAIYWPAFL------LSANLPLP 287 G K ++P V G DI+ F W A + + +P Sbjct: 487 SSGLWPFSTLGWPEKTQDLDTYYPTTTLVTGFDIIFF----WVARMTMMAGHFTGKMPF- 541 Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDG 345 + V+ HG + +K+SKS N IDP+ +I++ G DALRY LV+E + G+D + D Sbjct: 542 QTVYIHGLVRDENNKKMSKSANNGIDPLLLIDKYGTDALRYTLVKEVVGAGQDIRLEYDR 601 Query: 346 LK-KRVNADLANGIGNLVSRSVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQE 400 K + V+ + + N + + ++ + +G P P SD ILS +V+++ Sbjct: 602 KKDESVSVEASRNFANKLWNASRFVMMNLEGQTPEQLGEPQGIELSDRWILSRYHQVVKQ 661 Query: 401 IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 ++ N + A + + D Y + K K +P T + V+ + Sbjct: 662 TNNHIDNYGLGEAAKGLYEFIWGDFCDWYIELVKSRLQKDADPVFRKTAQQILALVLSGV 721 Query: 459 AILLQAFVPKLANKIFDILFVAD-ENRCFQSL 489 LL F+P + +I+ L +NR F +L Sbjct: 722 LKLLHPFMPHITEEIWQTLTQQPIDNRQFLAL 753 Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust. Identities = 15/32 (46%), Positives = 22/32 (68%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 H+GHA+E + D L R+HR+ G + L+ GTD Sbjct: 71 HMGHAFESALIDALVRYHRMKGRNTLWLPGTD 102 >gi|237756572|ref|ZP_04585094.1| valyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691272|gb|EEP60358.1| valyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] Length = 768 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 24/263 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280 ++ W + T G+ D A F+P L V G DI+ F W A ++ Sbjct: 324 VLDTWFSSALWPFGTLGWPSRKDDL-AVFYPTSLLVTGFDIIFF----WVARMIMMGTKF 378 Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 + ++P K V+ H + KGEK+SK+ GNVIDP+E+ E+ G DALR+ L A G+D Sbjct: 379 TNDVPF-KDVYIHALVRDEKGEKMSKTKGNVIDPLEMAEKYGSDALRFTLASLAAQGRDI 437 Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSR 396 +KR+ +N I N S+ V + +DYDG + + D IL+ ++ Sbjct: 438 RLS----EKRIEGYKHFSNKIWN-ASKFVLINSEDYDGKANLESLSLSIEDYWILTKLNK 492 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 ++ + ++N + + D Y + K + K +P+ T L V V Sbjct: 493 TIENSTKELENYRYNEYANILYDFFWHDYCDWYIELSKE-RIYKGSPEEKKTALTVLNFV 551 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 +R+ LL +P + +I+ L Sbjct: 552 LRESLKLLHPIMPYITEEIYGYL 574 >gi|154710435|gb|ABS84280.1| TP0798-like protein [Treponema paraluiscuniculi] Length = 122 Score = 66.6 bits (161), Expect = 8e-09, Method: Composition-based stats. Identities = 36/111 (32%), Positives = 55/111 (49%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68 I+ A+ Y N PH+G+ + + ADV ARF R+ G F GTDE+G A G++ Sbjct: 6 ITAALPYVNNVPHLGNLIQGLSADVFARFCRMRGYHTCFVCGTDEYGTASETRAAEQGLS 65 Query: 69 TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 RD+ D+S+D F RTT H + + L++ + +G I Sbjct: 66 PAQLCAHYHALHRDIYQWFDLSFDYFGRTTSDAHTELTQALFRHLDARGFI 116 >gi|194476850|ref|YP_002049029.1| t-RNA synthetase, class Ia:Valyl-tRNA [Paulinella chromatophora] gi|171191857|gb|ACB42819.1| t-RNA synthetase, class Ia:Valyl-tRNA [Paulinella chromatophora] Length = 916 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 76/299 (25%), Positives = 130/299 (43%), Gaps = 22/299 (7%) Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260 ++ ++ L +R+ + I I D + ++ W + +T G+ D+ ++P Sbjct: 446 RTSVEALEQARECYGDKIVINQD-EDVLDTWFSSGLWPFSTLGWPDSNSADFQCWYPNST 504 Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHKGE-KISKSLGNVIDPIEVIE 318 V G DI+ F S +P K+V+ HG + + K+SKS+GN IDP+ +I+ Sbjct: 505 LVTGFDIIFFWVARMTMMASSFTKKMPFKEVYIHGLVRDENNCKMSKSMGNGIDPLVLID 564 Query: 319 EVGVDALRYFLVREIA-CGKDGFYD-----KDGLKKRVNADLANGIGNLVSRSVSMILKD 372 G DALR+ LV E+A G+D D LK + + AN I N R M L D Sbjct: 565 RYGADALRFALVWEVAGAGQDIRLDYNRNENTSLKVESSRNFANKIWN-ACRFTLMNLND 623 Query: 373 YDGM---IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427 + P P SD ILS ++V E+ E + + A + D + Sbjct: 624 QNTNNLGTPDPRQLKLSDRWILSRLAQVNIEMSEYYSSYNLGEAAKAIYEFTWNDLCDWF 683 Query: 428 FDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 + K ++ N D + T V + V+ Q+ ++L +P + +++ L N Sbjct: 684 IELAK----RRINSDDYTLRQTTFQVLMIVLEQILVMLHPLMPHITEELWHGLMRVPAN 738 >gi|157376611|ref|YP_001475211.1| leucyl-tRNA synthetase [Shewanella sediminis HAW-EB3] gi|189083149|sp|A8FZ10|SYL_SHESH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|157318985|gb|ABV38083.1| leucyl-tRNA synthetase [Shewanella sediminis HAW-EB3] Length = 863 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 65/242 (26%), Positives = 105/242 (43%), Gaps = 17/242 (7%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + +EK Y + YP+ + H+GH I DV+AR+ RL G +VL G D G A Sbjct: 30 ENKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENA 89 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A + +N ++ +L YD I T ++ + + K+ +KG + Sbjct: 90 AIKNNTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLFEKGLV 149 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178 YK S + DE +++V DG + V+ E +F +++ Y D+LL Sbjct: 150 YKKTASVNWCPNDETVLANEQVI---DGCCWRCD-TTVEQKEIPQWFIKITEYADELLKD 205 Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 + PE + ++R R+E I G+ D S +TFD PD + YV I Sbjct: 206 IDQLDEWPEQVKTMQRNWIGRSEGIEMT-FGVVD---SEETFDIYTTRPDTVMGVTYVAI 261 Query: 233 DA 234 A Sbjct: 262 AA 263 >gi|15615600|ref|NP_243904.1| valyl-tRNA synthetase [Bacillus halodurans C-125] gi|12585349|sp|Q9K8G8|SYV_BACHD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|10175660|dbj|BAB06757.1| valyl-tRNA synthetase [Bacillus halodurans C-125] Length = 880 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 44/231 (19%) Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQYI---------MYVWIDALTNYLT 240 ++D +SR+ + WG +IP + PQ I + W + + Sbjct: 403 IRDWCISRQLW-WGHRIPAWYHKETGEVYVGHEAPQDIDNWKQDEDVLDTWFSSALWPFS 461 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-----PLPKKVFSHGF 295 T G+ D +++ D V G DI+ F W + ++ L P K V HG Sbjct: 462 TMGWPDEEAPDYKRYYSTDALVTGYDIIFF----WVSRMIFQGLEFTGQPPFKDVLIHGL 517 Query: 296 ILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + +G+K+SKSLGN +DP+EVI++ G DALR+FL + G D + + ++ N Sbjct: 518 VRDAEGQKMSKSLGNGVDPMEVIDKYGADALRFFLATGSSPGNDLRFYWEKVESTWN--- 574 Query: 355 ANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQEI 401 GN + + L + DGM I G + +D+ IL+ ++ + Sbjct: 575 ---FGNKIWNASRFALMNMDGMSYDEIDLTGEKSIADQWILTRLQETIETV 622 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L+R R+ G D L+ G D G A A V Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTALQDILSRLKRMQGYDTLWLPGMDHAG-----IATQAKV 97 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ + SR F + Y DFIR T ++ Sbjct: 98 EAKLREEGKSRYDLGREAFVEKTWEWKEEYADFIRQQWAKLGLSLDYSRERFTLDEGLSK 157 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 R ++ K+ +KG IY+G Y W + A + + +YK G +Y+ ++ Sbjct: 158 AVREVFVKLYEKGLIYRGEYIINWDPVTKTALSDIEVIYKDVQGYFYHMKY 208 >gi|88809487|ref|ZP_01124995.1| valyl-tRNA synthetase [Synechococcus sp. WH 7805] gi|88786706|gb|EAR17865.1| valyl-tRNA synthetase [Synechococcus sp. WH 7805] Length = 979 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 66/270 (24%), Positives = 112/270 (41%), Gaps = 27/270 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + A + + Sbjct: 526 VLDTWFSSGLWPFSTLGWPDADSADLQRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEM 585 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYD 342 P + V+ HG + + K+SKS GN IDP+ +I+ G DALR+ LVRE+A G+D D Sbjct: 586 PF-QDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVREVAGAGQDIRLD 644 Query: 343 KD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PGAFTESDESILSVCS 395 D + + N + + L + G P P A +D ILS + Sbjct: 645 YDRKTDTSATVEASRNFANKLWNATRFALMNLGGETPAQLGEPIPEALQLADRWILSRLA 704 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST------- 446 RV +E E + + A + D Y + K ++ NP + Sbjct: 705 RVNRETAERYSSYGLGEAAKGLYEFAWNDVCDWYLELSK----RRLNPGENPSAEALADQ 760 Query: 447 --VLYVTVEVIRQLAILLQAFVPKLANKIF 474 V +VI Q+ ++L +P L +++ Sbjct: 761 RVAKQVLAKVISQMHLMLHPLMPHLTEELW 790 >gi|237743264|ref|ZP_04573745.1| valyl-tRNA synthetase [Fusobacterium sp. 7_1] gi|229433043|gb|EEO43255.1| valyl-tRNA synthetase [Fusobacterium sp. 7_1] Length = 887 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 68/259 (26%), Positives = 123/259 (47%), Gaps = 18/259 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ P+ +K F+P V G DI+ F F + Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELDLFYPTSTLVTGADIIFFWVARMIMFGMYELK 508 Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 +P K VF HG + + G K+SKSLGN DP+++I+E GVDA+R+ ++ + G+D + Sbjct: 509 KIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQGQDVHFS 568 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400 D L + + AN I N +R V M L+ +D + T + D+ I+S + ++ Sbjct: 569 TDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISRLNETAKD 625 Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL---YVTVEVI 455 +++ ++ + A V + D Y + K L + D+ + L Y+ ++ Sbjct: 626 VKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLTAQYMLWTIL 684 Query: 456 RQLAILLQAFVPKLANKIF 474 Q LL F+P + +I+ Sbjct: 685 EQGLRLLHPFMPFITEEIW 703 >gi|322514586|ref|ZP_08067619.1| leucine--tRNA ligase [Actinobacillus ureae ATCC 25976] gi|322119525|gb|EFX91612.1| leucine--tRNA ligase [Actinobacillus ureae ATCC 25976] Length = 861 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + + YP+ + H+GH I DV++R+ R+ G +VL G D G AA Sbjct: 32 KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N + +L SY D + T ++ + + K+ KG +YK Sbjct: 92 KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTKLYKKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + DE +++V++G + PV+ E +F +++ Y ++LL++ + Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLNHLD 207 Query: 182 SHPEF 186 + P++ Sbjct: 208 NLPQW 212 >gi|262066120|ref|ZP_06025732.1| valine--tRNA ligase [Fusobacterium periodonticum ATCC 33693] gi|291380215|gb|EFE87733.1| valine--tRNA ligase [Fusobacterium periodonticum ATCC 33693] Length = 887 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 22/261 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ P+ +K F+P V G DI+ F F + Sbjct: 452 VLDTWFSSALWPFSTMGW---PERTKELDLFYPTSTLVTGADIIFFWVARMIMFGMYELK 508 Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 +P K VF HG + + G K+SKSLGN DP+++I+E GVDA+R+ ++ + G+D + Sbjct: 509 KIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEFGVDAIRFSMIYNTSQGQDVHFS 568 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400 D L + + AN I N +R V M L+ +D + T + D+ I+S + ++ Sbjct: 569 TDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISRLNETAKD 625 Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS-----TVLYVTVE 453 +++ ++ + A V + D Y + K ++ N D T Y+ Sbjct: 626 VKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAK---IRLYNDDEDKKISKLTAQYMLWT 682 Query: 454 VIRQLAILLQAFVPKLANKIF 474 ++ Q LL F+P + +I+ Sbjct: 683 ILEQGLRLLHPFMPFITEEIW 703 >gi|228993197|ref|ZP_04153118.1| Valyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] gi|228999247|ref|ZP_04158827.1| Valyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|228760444|gb|EEM09410.1| Valyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|228766523|gb|EEM15165.1| Valyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] Length = 881 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 19/261 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++ D V G DI+ F W + ++ L Sbjct: 449 VLDTWFSSALWPFSTLGWPNEDAEDFKRYYSTDALVTGYDIIFF----WVSRMIFQGLEF 504 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K V HG + +G K+SKSLGN IDP++VI++ G DA+R+FL A G+D Sbjct: 505 TGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIDKYGADAMRFFLSTGSAPGQDLR 564 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKD--YDGMIPTPGAFTESDESILSVCSRVL 398 + + ++ N N I N SR V M + D Y+ I G + +D+ IL+ + + Sbjct: 565 FSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYED-IDLTGEKSVADKWILTRLNETI 620 Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 + + NM A + + + + D Y + K L + T + V+ Sbjct: 621 ESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKL-PLYGEDEVAKKTTRSILAYVLD 679 Query: 457 QLAILLQAFVPKLANKIFDIL 477 Q LL F+P + KI+ L Sbjct: 680 QTMRLLHPFMPFVTEKIWQHL 700 Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 25/173 (14%) Query: 5 EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 EK + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A Sbjct: 38 EKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQA 95 Query: 63 QNAGVTTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRH 102 + G + + D F + A Y IR T ++ Sbjct: 96 KVEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGL 155 Query: 103 HDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 D ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 156 SDAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEIQGAFYHMNY 208 >gi|148927968|ref|ZP_01811369.1| aminoacyl-tRNA synthetase, class Ia [candidate division TM7 genomosp. GTL1] gi|147886686|gb|EDK72255.1| aminoacyl-tRNA synthetase, class Ia [candidate division TM7 genomosp. GTL1] Length = 629 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 75/311 (24%), Positives = 130/311 (41%), Gaps = 59/311 (18%) Query: 204 LKDLSLSRKTFDWGIKIP-----DDPQYIMY------------------------VWIDA 234 L+D +LSR+ WGI IP D+P ++ W + Sbjct: 177 LRDWNLSRQ-IPWGIPIPAFQNIDNPDDWIFDSRVDRETIEVGGYTYKREEDTFDTWFSS 235 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KK 289 TT YL+ G +KF+P D+ G D+L W A ++ L + K Sbjct: 236 GQWPFITTDYLEG--GELSKFYPTDMMETGHDLLD----RWVARMIMLGLYMTDKVPFKN 289 Query: 290 VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348 V+ HG +L + G+K+SKS GNVI+P+++I + G DA R ++ + G++ + K Sbjct: 290 VYMHGMVLDEHGQKMSKSKGNVINPMDIINKYGSDAFRLGIIASRSAGQNQAFST--TKV 347 Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408 + AN + N+ + + + P P T +D I+ + +EI + + Sbjct: 348 VAGRNFANKLWNIARFIEDRVGEKFKNRAPEPQ--TIADHWIIRELNTASEEIDRLLSDY 405 Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466 A V + + D Y +A K ++ NP + VL +++ L F Sbjct: 406 RFAEATEVVYHTIWDNVADWYVEASK----RQNNPGMLAWVLETSLK-------LAHLFA 454 Query: 467 PKLANKIFDIL 477 P + I++ L Sbjct: 455 PFVTETIWETL 465 >gi|74318463|ref|YP_316203.1| leucyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259] gi|123758998|sp|Q3SG58|SYL_THIDA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|74057958|gb|AAZ98398.1| leucyl-tRNA synthetase, class Ia [Thiobacillus denitrificans ATCC 25259] Length = 857 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 12/189 (6%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +R K Y + YP+ + H+GH I DVLAR+H L G +V+ G D G AA Sbjct: 31 DRPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLARYHALRGFNVMQPMGWDAFGLPAENAA 90 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 GV + N + R L I + + T + ++ + L+ ++ +KG IY Sbjct: 91 IANGVPPAQWTYANIDHMRTQLQALGFAIDWSRELATCKPDYYRWEQWLFTRLFEKGVIY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 K + + D+ +++V G G + P+ YFFR++ Y D+LL Sbjct: 151 KKMATVNWDPVDQTVLANEQVIDGRGWRSGALVEKRDIPM-------YFFRITQYADELL 203 Query: 178 SYYESHPEF 186 S ++ P + Sbjct: 204 SGLDTLPGW 212 >gi|229006794|ref|ZP_04164427.1| Valyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228754416|gb|EEM03828.1| Valyl-tRNA synthetase [Bacillus mycoides Rock1-4] Length = 867 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 19/261 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++ D V G DI+ F W + ++ L Sbjct: 435 VLDTWFSSALWPFSTLGWPNEDAEDFKRYYSTDALVTGYDIIFF----WVSRMIFQGLEF 490 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K V HG + +G K+SKSLGN IDP++VI++ G DA+R+FL A G+D Sbjct: 491 TGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIDKYGADAMRFFLSTGSAPGQDLR 550 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKD--YDGMIPTPGAFTESDESILSVCSRVL 398 + + ++ N N I N SR V M + D Y+ I G + +D+ IL+ + + Sbjct: 551 FSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYED-IDLTGEKSVADKWILTRLNETI 606 Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 + + NM A + + + + D Y + K L + T + V+ Sbjct: 607 ESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKL-PLYGEDEVAKKTTRSILAYVLD 665 Query: 457 QLAILLQAFVPKLANKIFDIL 477 Q LL F+P + KI+ L Sbjct: 666 QTMRLLHPFMPFVTEKIWQHL 686 Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 25/173 (14%) Query: 5 EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 EK + I PN + H+GHA++ + D+L R R+ G DVL+ G D G IA A Sbjct: 24 EKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQA 81 Query: 63 QNAGVTTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRH 102 + G + + D F + A Y IR T ++ Sbjct: 82 KVEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGL 141 Query: 103 HDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 D ++ ++ +KG IY+G Y W A + + ++K G +Y+ + Sbjct: 142 SDAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEIQGAFYHMNY 194 >gi|119385062|ref|YP_916118.1| valyl-tRNA synthetase [Paracoccus denitrificans PD1222] gi|119374829|gb|ABL70422.1| valyl-tRNA synthetase [Paracoccus denitrificans PD1222] Length = 1030 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 81/167 (48%), Gaps = 30/167 (17%) Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY-VWIDA------LTNYL 239 ++ + R I GL D +L++ DP ++Y VW DA ++ L Sbjct: 568 VIEVADREAAIDAFAQGLADYNLTQ-----------DPTRLVYPVWRDADVLDTWFSSGL 616 Query: 240 TTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFS 292 G L P+ + K++P + V G DI+ F W A ++ L + + V+ Sbjct: 617 WPIGTLGWPEDTTELRKYFPTSVLVTGFDIIFF----WVARMMMMQLAVVGQVPFRTVYV 672 Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 HG + KG K+SKS GNVIDP+ +I+E G DALR+ L A G+D Sbjct: 673 HGLVRDEKGAKMSKSKGNVIDPLTLIDEYGADALRFTLTSMAAMGRD 719 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 13/68 (19%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN HIGHA + D+L R+HR+ G D L+ G D +AG+ Sbjct: 40 SVVIPPPNVTGSLHIGHALNNTLQDILVRWHRMRGFDTLWQPGQD-----------HAGI 88 Query: 68 TTKVFVDQ 75 T++ V++ Sbjct: 89 ATQMVVER 96 >gi|253575687|ref|ZP_04853023.1| valyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251845025|gb|EES73037.1| valyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 891 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 16/183 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + G DI+ F W A ++ +L Sbjct: 459 VLDTWFSSALWPFSTLGWPDEDSADLKRYFPTSVLSTGYDIIYF----WVARMIFTSLEF 514 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K V HG + +G K+SKSLGN +DPIEVIE+ G DA+RY L G+D Sbjct: 515 TGQVPFKDVLIHGLVRDSEGRKMSKSLGNGVDPIEVIEKYGADAMRYMLSTSNTPGQDLR 574 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILK--DYDGMIPTPGAFTESDESILSVCSRVL 398 + + +++ N AN I N SR M L+ Y+ I G + +D IL + Sbjct: 575 FRWERVEQARN--FANKIWN-ASRFALMNLEGVKYED-IDISGELSTADRWILHRMNETA 630 Query: 399 QEI 401 +EI Sbjct: 631 KEI 633 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 23/155 (14%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-----TKV 71 HIGHA ++ + D+L R R+ G D L+ G D G ++ + + GV+ + Sbjct: 62 HIGHALDLTLQDILTRTKRMQGYDALWLPGMDHAGIATQTRVEQRLREQGVSRYDLGREK 121 Query: 72 FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 F++Q + M LD S + F T ++ R ++ K+ +KG IY Sbjct: 122 FLEQVWAWKDQYAGTIHEQWAKMGASLDYSRERF--TLDEGLSQAVREVFVKLYEKGLIY 179 Query: 121 KGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 +G Y + +D EV YK +G Y+ Q+ Sbjct: 180 RGKYIINWDPAARTALSDIEVEYKEVNGHLYHLQY 214 >gi|163752480|ref|ZP_02159669.1| leucyl-tRNA synthetase [Shewanella benthica KT99] gi|161327624|gb|EDP98819.1| leucyl-tRNA synthetase [Shewanella benthica KT99] Length = 863 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 18/256 (7%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + +EK Y YP+ + H+GH I DV+AR+ RL G +VL G D G A Sbjct: 30 ENKEKFYCLAMFPYPSGRLHMGHVRNYTIGDVIARYQRLQGKNVLQPIGWDSFGLPAENA 89 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A + +N ++ +L YD I T ++ + + K+ +KG + Sbjct: 90 AIKNNTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLFEKGMV 149 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178 YK S + DE +++V DG + V+ E +F +++ Y D+LL+ Sbjct: 150 YKKTSSVNWCPNDETVLANEQVI---DGCCWRCD-TVVEQKEIPQWFIKITEYADELLTD 205 Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 + PE + ++R R+E I + S ++FD PD + YV I Sbjct: 206 LDQLDEWPEQVKTMQRNWIGRSEGIEMTFKVVD----SEESFDIYTTRPDTVMGVTYVAI 261 Query: 233 DALTNYLTTTGYLDNP 248 A + L DNP Sbjct: 262 -AAGHPLAEQAAADNP 276 >gi|156603749|ref|XP_001618894.1| hypothetical protein NEMVEDRAFT_v1g152996 [Nematostella vectensis] gi|156200817|gb|EDO26794.1| predicted protein [Nematostella vectensis] Length = 673 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 31/265 (11%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANL- 284 ++ W + + G+ +NPD + K++ P V +I+ F W A + A Sbjct: 377 VLDTWFSSWLWPMQVFGWNENPDNEELKYYYPTKTLVTAPEIIFF----WVARMAMAGYE 432 Query: 285 -----PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 P K F+ +G K+SK LGN D + +IEE G DA+R+ ++ G D Sbjct: 433 YLGQKPFDKVYFTGIVRDKQGRKMSKQLGNSPDLLALIEEHGADAVRFSVMISSPAGNDL 492 Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL- 398 YD+ L++ N +N + N + ++K ++G A E ++ + RV Sbjct: 493 LYDESSLEQGRN--FSNKMWNALK-----LIKSWEGRTTKDVAIGEQQFAVDWMEQRVAK 545 Query: 399 --QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV---LYV-TV 452 Q+I E M++ + L + SL+ +D W L+ P + +++ LY TV Sbjct: 546 ASQQIEELMKDFRLSEGLKTIYSLI------WDDFCSWYLEWVKPAQEASMSQELYERTV 599 Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477 QL LL ++P + +++ ++ Sbjct: 600 ATFEQLLQLLHPYMPFVTEEMYHLM 624 >gi|320187432|gb|EFW62122.1| Methionyl-tRNA synthetase [Shigella flexneri CDC 796-83] Length = 349 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 7/176 (3%) Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGI 358 G K+SKS G I + D+LRY+ +++ D + + +RVNAD+ N + Sbjct: 3 GAKMSKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKV 62 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 NL SR+ I K +DG++ + A D + + + I E +++ +A+ +++ Sbjct: 63 VNLASRNAGFINKRFDGVLASELA----DPQLYKTFTDAAEVIGEAWESREFGKAVREIM 118 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472 +L +RY D Q PW + K A + + + + R L L+ +PKL + Sbjct: 119 ALADLANRYVDEQAPWVVAKQESRDADLQAICSMGINLFRVLMTYLKPVLPKLTER 174 >gi|300811354|ref|ZP_07091851.1| valine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497718|gb|EFK32743.1| valine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 879 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 28/200 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+L + +R + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLENQKGEGRVNFVPDRFEGTLERWMENVHDWVISRQLW-WGHRIPAWY 418 Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 D Q ++ W + +T G+ D +++P + Sbjct: 419 NKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFKRYFPTNAL 478 Query: 262 VIGKDILRF--HAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318 V G DI+ F + + + + P V HG I +G K+SKSLGN IDP+++I+ Sbjct: 479 VTGYDIIFFWVSRMIFQSLHFTGERPFDNVVL-HGLIRDEQGRKMSKSLGNGIDPMDIID 537 Query: 319 EVGVDALRYFLVREIACGKD 338 + G DALR+FL+ A G+D Sbjct: 538 KYGADALRWFLLNGTAPGQD 557 Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 24/137 (17%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L R+ R+ G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRYKRMQGYDTLYLPGMDHAGIATQAKVEARLR 98 Query: 64 NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 GV+ KV + + ++ + LD S + F T +K R Sbjct: 99 EQGVSRYDLGREKFMEKVWEWKDEYANIIKSQWQKLGLSLDYSRERF--TLDKGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCY 124 ++ ++ ++G IY+G Y Sbjct: 157 RVFVQLYNEGLIYRGEY 173 >gi|226294727|gb|EEH50147.1| leucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18] Length = 972 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 11/196 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK YI YP+ H+GH IAD+LARF + G DVL G D G AA Sbjct: 67 KEKAYILAMFPYPSGTLHMGHVRVYTIADMLARFKHMKGYDVLHPMGWDAFGLPAENAAI 126 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 G+ + QN N ++ + +D + + + + + T R L+ + +G Y Sbjct: 127 ERGIDPAQWTMQNIANMKEQLRAIGAHFDWNRELMTCSPEFYKHTQR-LFLMLYGRGLAY 185 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL--- 177 + Y D+ +++V A+G + + V+ +E + +FFR++A+++ LL Sbjct: 186 QAKALVNYDPVDKTVLANEQV--NANGCSWRSGAK-VKKVELKQWFFRITAFKEALLKDL 242 Query: 178 -SYYESHPEFILPIER 192 + + PE +L ++R Sbjct: 243 DALADGWPERVLSMQR 258 >gi|67906490|gb|AAY82597.1| predicted leucyl-tRNA synthetase LeuS [uncultured bacterium MedeBAC35C06] Length = 804 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 86/177 (48%), Gaps = 6/177 (3%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +REK Y + YP+ + H+GH I DV++R+ R+ +V G D G AA Sbjct: 30 KREKFYCLSMFPYPSGKLHMGHVRNYTIGDVVSRYKRMQNFNVFQPMGWDAFGLPAENAA 89 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 V+ + + N N + + L +SYD ++T + ++ ++++ K+ +KG +Y Sbjct: 90 IANEVSPEEWTKSNIDNMKSQLNSLGLSYDWSKELQTCDSDYYKWEQLIFTKLFEKGLVY 149 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 K + DE +++V G G A+ V+ E + +F +++ Y D+LL Sbjct: 150 KKKSMVNWDPVDETVLANEQVIDGK-GWRSGAK---VEIKEIDQWFIKITKYADELL 202 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 46/249 (18%), Positives = 104/249 (41%), Gaps = 39/249 (15%) Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKI 303 +W P DL++ G + H +Y F L+ + P KK+ + G +L G K+ Sbjct: 506 TNYWLPVDLYIGGIEHAILHLLYSRFFHKALRDLGLVDGDEPF-KKLLTQGMVLKDGAKM 564 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GN +DP I++ G D +R +++ + + ++ S Sbjct: 565 SKSKGNTVDPQSFIDKYGADTIRLYMMFTAPPEQSLEWSDKSVEG-------------AS 611 Query: 364 RSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVI 418 R + + DG+ IP P F++ ++ + + ++++ ++ + + + A+A ++ Sbjct: 612 RFLKRLWNLCDGLKYEDIPEPKNFSQEEKELRNKTHLTIKKVTDDFETRYAFNTAIASIM 671 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 L++ + + F D + + + E + + L P + +I+ + Sbjct: 672 ELLNSIPKSF----------VESDASPSQKFCLQEAVISIVQCLFPIAPHICEQIWCNFY 721 Query: 479 VADENRCFQ 487 +N C + Sbjct: 722 DGSQN-CIE 729 >gi|282856769|ref|ZP_06266030.1| valine--tRNA ligase [Pyramidobacter piscolens W5455] gi|282585392|gb|EFB90699.1| valine--tRNA ligase [Pyramidobacter piscolens W5455] Length = 901 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 79/313 (25%), Positives = 133/313 (42%), Gaps = 54/313 (17%) Query: 203 GLKDLSLSRKTFDWGIKIP--------------DDP--------------QYIMYVWIDA 234 G++D +SR+ + WG +IP DP + ++ W + Sbjct: 415 GVRDWCISRQLW-WGHRIPAWTCEDCGHIVVAEHDPDCCPKCGSRKLKQDEDVLDTWFSS 473 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KK 289 +T G+ ++ + + F+P + V G DI+ F W + ++ L +P + Sbjct: 474 ALWPFSTMGWPEDTEELRY-FYPTSVMVTGFDIIFF----WVSRMIMMGLEFMDEVPFRD 528 Query: 290 VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD---GFYDKDG 345 +F H + KG K+SKSLGN IDPI++I G DALR+ + G+D G + Sbjct: 529 IFIHALVRDEKGRKMSKSLGNGIDPIDMINLYGADALRFTVAALTVQGRDILLGPAKIES 588 Query: 346 LKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 K+ +N I N SR M L +D++G P P D IL R+ + + Sbjct: 589 YKRFINK-----IWN-ASRFALMNLGDEDHEGQ-PDPKRMRLHDRWILERLRRLDDVVTK 641 Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461 ++ I A ++ + D Y + KP P+R T V + V R + L Sbjct: 642 DIDGYFIGEAARELYEFMWGDFCDWYIELSKPALYGDEGPERQKTTKRVLLCVFRDVLRL 701 Query: 462 LQAFVPKLANKIF 474 L F P + +++ Sbjct: 702 LHPFTPFVTEELW 714 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 67/159 (42%), Gaps = 24/159 (15%) Query: 5 EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------- 55 EK S + PN H+GHAY+ D+LAR+ R G VL+ GTD G Sbjct: 38 EKKAFSIVLPPPNVTGALHMGHAYDHTFQDILARYKRARGYSVLWLPGTDHAGIATQNVV 97 Query: 56 -QKIAK-AAQNAGVTTKVFV-----------DQNSRNFRDMADVLDISYDDFIRTTEKRH 102 +++AK + + FV D+ + + D D + F T ++ Sbjct: 98 ERRLAKEGTSRRALGREAFVKRTWEWKEEYRDRIVNQMKSLGDSCDWKRERF--TMDEGL 155 Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 R ++ ++ +KG IYKG Y + R +D EV Sbjct: 156 SKAVRTVFCRLYEKGLIYKGKYIVNWCPRCHTALSDIEV 194 >gi|309806731|ref|ZP_07700726.1| methionine--tRNA ligase domain protein [Lactobacillus iners LactinV 03V1-b] gi|308166911|gb|EFO69095.1| methionine--tRNA ligase domain protein [Lactobacillus iners LactinV 03V1-b] Length = 62 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 29/62 (46%), Positives = 41/62 (66%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 M E++ YI+T I YP+ + IG+AY + AD +AR+ R +G D F TGTDEHG KI + Sbjct: 1 MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60 Query: 61 AA 62 + Sbjct: 61 KS 62 >gi|57234777|ref|YP_181174.1| valyl-tRNA synthetase [Dehalococcoides ethenogenes 195] gi|90103540|sp|Q3Z9C5|SYV_DEHE1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|57225225|gb|AAW40282.1| valyl-tRNA synthetase [Dehalococcoides ethenogenes 195] Length = 880 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 76/281 (27%), Positives = 123/281 (43%), Gaps = 44/281 (15%) Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 M + +F ++ L S ILP ER +V ++D +SR+ + WG + Sbjct: 361 MVSKQWFVKMEPLAKPALEAVNSGRIQILP-ERFTKVYQNWMENIRDWCISRQLW-WGHR 418 Query: 220 IP-------------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSK 252 IP +DP ++ W + +T G+ D + K Sbjct: 419 IPVWYCPCGEMIVSKEDPTACPKCGSTKLEQDPDVLDTWFSSGLWPHSTLGWPDQTEDLK 478 Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFILH-KGEKISKS 306 +F+P + DI+ F W A ++ + +P + V+ HG I KGEK+SK+ Sbjct: 479 -RFYPGSVLETAYDIIFF----WVARMIVMGIEDMKEVPFRTVYLHGLIRDDKGEKMSKT 533 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNVIDP++VI++ G DALR+ + + G D + L+ N N + N SR V Sbjct: 534 KGNVIDPLKVIDQYGTDALRFAVTFGTSPGNDSKLGQTKLEAARN--FVNKLWN-ASRFV 590 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 M L + ++P G E D ILS +RV ++ M+ Sbjct: 591 IMNLGEEKELLPEAGLPLE-DRWILSRMNRVTADVIRLMEE 630 >gi|145223217|ref|YP_001133895.1| valyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK] gi|315443675|ref|YP_004076554.1| valyl-tRNA synthetase [Mycobacterium sp. Spyr1] gi|145215703|gb|ABP45107.1| valyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK] gi|315261978|gb|ADT98719.1| valyl-tRNA synthetase [Mycobacterium sp. Spyr1] Length = 900 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 41/288 (14%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280 DP ++ W + +T G+ D+ AKF+P + V G DIL +W A ++ Sbjct: 457 DPD-VLDTWFSSALWPFSTMGWPDHTP-ELAKFYPTTVLVTGYDIL----FFWVARMMMF 510 Query: 281 -------------------SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEV 320 S +P K VF HG I + G K+SKS GN IDP++ +E Sbjct: 511 GTFVGGDPAIIGDGAAKKSSPQVPF-KNVFLHGLIRDEFGRKMSKSRGNGIDPLDWVETF 569 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 G DALR+ L R + G D +D R + + A + N + +++ +P Sbjct: 570 GADALRFTLARGASPGGDLAIGED--HARASRNFATKLFN--ATRFALLNGASPAPLPPT 625 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438 T++D IL V ++ + N +RA + + D Y + K +L + Sbjct: 626 AELTDADRWILGRLEEVRADVDAALDNYEFNRACEALYHFAWDEFCDWYLELAKV-QLGQ 684 Query: 439 TNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIF---DILFVAD 481 +P R + VL ++V+ +L + FV ++ K + L +AD Sbjct: 685 EDPQTARTTAVLATVLDVLLKLLHPVMPFVTEVLWKTLTGGESLVIAD 732 Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 22/122 (18%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK------V 71 H+GHA + + D L R R+ G +VL+ G D G Q + + A TK + Sbjct: 68 HMGHALDHTLMDALTRRKRMQGYEVLWLPGMDHAGIATQSVVEKQLAADGKTKEDFGREL 127 Query: 72 FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 F+D+ R + D +D S D F T + R ++K++ D G IY Sbjct: 128 FIDKVWDWKRESGGTIGAQMRRIGDGVDWSRDRF--TMDDTLSRAVRTIFKRLFDAGLIY 185 Query: 121 KG 122 + Sbjct: 186 QA 187 >gi|242399103|ref|YP_002994527.1| Isoleucyl-tRNA synthetase [Thermococcus sibiricus MM 739] gi|242265496|gb|ACS90178.1| Isoleucyl-tRNA synthetase [Thermococcus sibiricus MM 739] Length = 1070 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 88/392 (22%), Positives = 182/392 (46%), Gaps = 29/392 (7%) Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFR 168 KI ++ D Y W +R Y++ ++ G Q Y P+ W E+G + Sbjct: 429 KIIEENDKKVTWYPDWVKIR----YDNGVMHSGDWCISRQRYWGIPLPI-WSSEDGEIYI 483 Query: 169 LSAYQD--KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ 225 + +++ +L E + E I E +E + ++ L L R D + IK+ + Sbjct: 484 VGTFEELVELSVAIEVNGERIELPESYDEKLRVIEEKLGPEDLHRPYVDAFVIKVNNKEM 543 Query: 226 Y----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD-ILRFHAIYWPAFLL 280 ++ VW D+ + Y D + + WPAD V G+D + ++ A ++ Sbjct: 544 KRVKDVLDVWFDSGIASWASLDYPRRKDLFE-RLWPADFIVEGEDQVTKWFYSQQAASVV 602 Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 + + +KV HG++L KG+K+SKSLGN+I P +VI++ G D R++++ ++ Sbjct: 603 AFDTVPYRKVAMHGYVLDEKGDKMSKSLGNIIRPEDVIQKDGRDPFRFYMLWATTPWENL 662 Query: 340 FYDKDGLKKRVNADLANGIGNL-VSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSR 396 + GL + + N + N+ + S M L ++D + P F E D+ ILS + Sbjct: 663 RFSWKGLAQ--VKRMLNILWNVYILSSTYMSLDNFDPTKLNPEELPFREEDKWILSKVNN 720 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDRASTVLYVTV 452 ++ + + +++ + +A + + + E + R++ ++ W +++ +PD+ + + Sbjct: 721 LISTVEDGLESFYLTKATRGIENFIIEDLSRWYVRVIRKRLW-VERDDPDKLAA-YWTLW 778 Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENR 484 ++ L L+ F P + +I+ L N+ Sbjct: 779 KIFDVLLRLMAPFTPYITEEIYQNLIRPFSNK 810 >gi|127513857|ref|YP_001095054.1| leucyl-tRNA synthetase [Shewanella loihica PV-4] gi|166231642|sp|A3QH47|SYL_SHELP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|126639152|gb|ABO24795.1| leucyl-tRNA synthetase [Shewanella loihica PV-4] Length = 863 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 17/242 (7%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + +EK Y + YP+ + H+GH I DV+AR+ RL G +VL G D G A Sbjct: 30 ESKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENA 89 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A N + +N ++ +L YD I T ++ + + K+ +KG + Sbjct: 90 AINNKTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLV 149 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178 YK S + DE +++V DG + VQ E +F +++ Y ++LL+ Sbjct: 150 YKKTASVNWCPNDETVLANEQV---QDGCCWRCDTQVVQ-KEIPQWFIKITDYAEELLND 205 Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 + PE + ++R R+E I + S ++FD PD + YV I Sbjct: 206 IDQLDEWPEQVKTMQRNWIGRSEGIEMTFQ----VEGSDQSFDIYTTRPDTVMGVTYVAI 261 Query: 233 DA 234 A Sbjct: 262 AA 263 >gi|312880132|ref|ZP_07739932.1| valyl-tRNA synthetase [Aminomonas paucivorans DSM 12260] gi|310783423|gb|EFQ23821.1| valyl-tRNA synthetase [Aminomonas paucivorans DSM 12260] Length = 888 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 25/261 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + A+F+P L G DI+ +W A ++ L Sbjct: 454 VLDTWFSSALWPFSTMGWPEKTP-ELARFYPTGLLTTGFDII----FFWVARMVMMGLEF 508 Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 ++V +H KG+K+SKS GNVIDP++VI+ G DALR L G+D + Sbjct: 509 MEEVPFRNVYIHALVRDEKGQKMSKSKGNVIDPLDVIDRFGADALRLTLASLTVQGRDIY 568 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DESILSVCS 395 + ++ N + + L + +G P G F E D IL+ Sbjct: 569 LSTNKIES------YRFFLNKLWNASRFALLNLEGTDPN-GTFREEDLRLHDRWILTRRG 621 Query: 396 RVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 V++E+ ++ A + V D Y + KP R + V + Sbjct: 622 EVIEEMGRLLEGYFFGEAARLMYDFVWTELCDWYLELSKPALRGDEGESRKAATQGVLLS 681 Query: 454 VIRQLAILLQAFVPKLANKIF 474 V R + +LL FVP + +++ Sbjct: 682 VFRDVLLLLHPFVPFVTEELW 702 >gi|284163384|ref|YP_003401663.1| isoleucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511] gi|284013039|gb|ADB58990.1| isoleucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511] Length = 1068 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 75/301 (24%), Positives = 134/301 (44%), Gaps = 35/301 (11%) Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254 E + K + DL+++ + ++PD + VW+D+ T Y ++ D + Sbjct: 502 EDVDLHKDTVDDLTITEDGTTY-TRVPD----VFDVWLDSSVASWGTLNYPED-DSRFDE 555 Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLS----ANLPLPKKVFSHGF-ILHKGEKISKSLGN 309 WPAD + D R +W +S P ++V HG ++ G +SKS Sbjct: 556 LWPADFILEAHDQTR--GWFWSQLGMSTAALGESPY-QEVLMHGHALMPDGRAMSKSKDI 612 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-M 368 +IDP E I+ G D +R FL+ G+D +D DG++ N + N+ + M Sbjct: 613 LIDPHEAIDRHGRDVMRMFLLSNNPQGEDMRFDWDGMQTMENH--LRTLWNVFRFPLPYM 670 Query: 369 ILKDYDGMIPTPGAFTES-------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 L ++D PT + DE +L+ E+ E +++ RAL +I V Sbjct: 671 RLDEFD---PTATTLEDVDSDLELIDEWVLARLQSTKAEMTEAFEDRRQDRALDALIEFV 727 Query: 422 SE-VDRYFDA---QKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDI 476 E V R++ ++ W + + RA+ Y T+ +V+R+ LL + P ++ +I+ Sbjct: 728 VEDVSRFYVQAVRERMWAEEDSGSKRAA---YATIYQVLRESVALLAPYAPFISEEIYGT 784 Query: 477 L 477 L Sbjct: 785 L 785 Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 19/140 (13%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQ 63 E + Y + H+G + + DV RF R+ G DV G D HG I + + Sbjct: 41 ESFFFVDGPPYTSGSAHMGTTWNKSLKDVYLRFLRMQGYDVTDRPGYDMHGLPIETRVEE 100 Query: 64 NAGVTTKVFVDQ-NSRNF----RDMADV-------------LDISYDDFIRTTEKRHHDT 105 G K +++ NF +D AD + + +DD RT E + + Sbjct: 101 RLGFENKKDIEEFGEENFIQECKDYADEQLEGLQEDFQDFGVWMDWDDPYRTVEPEYMEA 160 Query: 106 CRILWKKISDKGDIYKGCYS 125 + K +D+G + KG S Sbjct: 161 AWWGFSKAADRGLVEKGHRS 180 >gi|91762511|ref|ZP_01264476.1| Leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002] gi|91718313|gb|EAS84963.1| Leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002] Length = 844 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 8/179 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K R+K Y YP+ + H+GH I DVLAR+ L G +VL G D G A Sbjct: 29 KTRKKFYCLEMFPYPSGKIHMGHVRNYTIGDVLARYKMLQGYNVLHPMGWDSFGMPAENA 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ + K + + N + R L +S +D I T + ++ + + + DKG + Sbjct: 89 ARQNNLDPKTWTESNIKTMRSQLKKLGLSIDWDKEISTCSEDYYKHQQEFFLDLYDKGLV 148 Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y K Y W + DE +++V DG+ + + V+ + +FF +S + + LL Sbjct: 149 YRKENYVNWDPV-DETVLANEQV---VDGKGWRSGA-IVERKKLNQWFFNISKFSEDLL 202 Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust. Identities = 34/190 (17%), Positives = 80/190 (42%), Gaps = 33/190 (17%) Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 S I+ E +SKS N IDP +I+ G D++R F++ + KD + G+ + Sbjct: 605 SEKIIVGPTESMSKSKKNTIDPENIIKNYGADSVRLFILSDSPPEKDVQWSDQGM--LAS 662 Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ----N 407 + L S+ + I + G +E ++ + ++++ +I +N++ N Sbjct: 663 FKFVQKLWTLNSKILDKIKNNDQG--------SEGND-LTKFTNQLINKITQNLEKFHYN 713 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 ++ L+ E+D+ + + +E +++ I++ F+P Sbjct: 714 VIVANFYEMYNFLIKEIDKPIKKE------------------ILIENYKKILIVMNPFIP 755 Query: 468 KLANKIFDIL 477 +N+ + + Sbjct: 756 HFSNECLNTI 765 >gi|297526739|ref|YP_003668763.1| isoleucyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710] gi|297255655|gb|ADI31864.1| isoleucyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710] Length = 1058 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 77/273 (28%), Positives = 122/273 (44%), Gaps = 27/273 (9%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276 ++PD +M VW D+ ++ G+ P+ K D V G D +R F ++ Sbjct: 519 RVPD----VMDVWFDSAISFYAAKGH---PEKLSLKDIILDFIVEGHDQIRGWFFSLLRA 571 Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 L + P V HGF L + G ++ KSLGN + E IE G D LR F V + Sbjct: 572 GVLGFQSKPY-NTVLVHGFALDEHGREMHKSLGNYVGTDEAIERAGRDPLR-FWVSQNTV 629 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESIL 391 +D + G+ + + DL V S M L YD + + E D+ IL Sbjct: 630 WEDLRFSWRGIDE-IRRDLGIAWNTFVFASTYMNLDKYDPLQHRIDDYREHLRYEDKWIL 688 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDR--AS 445 S + V++++ EN++ IH A + + E Y +P W +++ PD+ A Sbjct: 689 SRINSVVKKVTENLEKYYIHEAARMLRKFIVEDVSHWYIRLIRPRVW-VEENTPDKLAAY 747 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 TVLY +E + ++ F P LA KI+ +F Sbjct: 748 TVLYYVLE---KWLRMMAPFTPFLAEKIYQEVF 777 Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 15/121 (12%) Query: 15 YPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTKVF 72 YP+ + PHIG A+ + D++ R+ R+ G +V G D HG I K Q GV K Sbjct: 52 YPSGEVPHIGTAWNKTLKDIVLRYKRMRGYNVFDRPGYDCHGLPIEVKIEQKLGVKVKRE 111 Query: 73 VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD 132 +++ I D F+ +K + + L K + G ++ + + +LRD Sbjct: 112 IEEK------------IGVDKFVNECKKLALNNIKSLTKWFKELG-VFMDWENPYLTLRD 158 Query: 133 E 133 E Sbjct: 159 E 159 >gi|257417812|ref|ZP_05594806.1| valyl-tRNA synthetase [Enterococcus faecalis T11] gi|257159640|gb|EEU89600.1| valyl-tRNA synthetase [Enterococcus faecalis T11] Length = 880 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 85/345 (24%), Positives = 144/345 (41%), Gaps = 45/345 (13%) Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F ++ +K + E+ EF P R N+ + D +SR+ + WG +IP Sbjct: 363 WFVKMGPLAEKAMKNQETEDAVEFYPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419 Query: 222 -------------DDP---------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 ++P ++ W + +T G+ + +++P Sbjct: 420 WYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPNEASEDYQRYFPTS 479 Query: 260 LHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316 V G DI+ F + + + + P + V HG I +G K+SKSLGN IDP++V Sbjct: 480 TLVTGYDIIFFWVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDV 538 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 IE+ G DALR+FL A G+D + + + N N I N SR V M + +GM Sbjct: 539 IEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGM 592 Query: 377 ----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430 I G T +D IL+ + + + E A Q+ + + + D Y + Sbjct: 593 TAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEM 652 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 K L N T + V + Q+ LL +P + +I++ Sbjct: 653 SKE-ILYGDNEVAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696 Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 42 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + FVDQ + M LD S + F T ++ + R Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ + +K IY+G Y + + + +D EV +K +G +Y+ + Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207 >gi|116513817|ref|YP_812723.1| valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093132|gb|ABJ58285.1| valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 879 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 28/200 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+L + +R + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLENQKGEGRVNFVPDRFEGTLERWMENVHDWVISRQLW-WGHRIPAWY 418 Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 D Q ++ W + +T G+ D +++P + Sbjct: 419 NKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFKRYFPTNAL 478 Query: 262 VIGKDILRF--HAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318 V G DI+ F + + + + P V HG I +G K+SKSLGN IDP++VI Sbjct: 479 VTGYDIIFFWVSRMIFQSLHFTGERPFDNVVL-HGLIRDEQGRKMSKSLGNGIDPMDVIA 537 Query: 319 EVGVDALRYFLVREIACGKD 338 + G DALR+FL+ A G+D Sbjct: 538 KYGADALRWFLLNGTAPGQD 557 Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 24/137 (17%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L R+ R+ G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRYKRMQGYDTLYLPGMDHAGIATQAKVEARLR 98 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 GV+ + FV++ R ++ + LD S + F T +K R Sbjct: 99 EQGVSRYDLGREKFVEKVWEWKDEYANIIKRQWQKLGLSLDYSRERF--TLDKGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCY 124 ++ ++ ++G IY+G Y Sbjct: 157 RVFVQLYNEGLIYRGEY 173 >gi|332186042|ref|ZP_08387788.1| valyl-tRNA synthetase [Sphingomonas sp. S17] gi|332013857|gb|EGI55916.1| valyl-tRNA synthetase [Sphingomonas sp. S17] Length = 890 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/277 (23%), Positives = 123/277 (44%), Gaps = 22/277 (7%) Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276 G+ + DP ++ W + T G+ DN D + A +P D+ + G DIL +W Sbjct: 456 GVTLTRDPD-VLDTWFSSALWPFATLGWPDNGDKTLAGRYPNDVLISGFDIL----FFWD 510 Query: 277 AFLLSANL----PLP-KKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 A ++ + +P K ++ HG + G K+SKS GN +DP+ +I++ G DALR+F+ Sbjct: 511 ARMMMQGIHFMEDVPFKTLYLHGLVRAADGSKMSKSKGNTVDPLGLIDQYGADALRFFMA 570 Query: 331 REIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 + G+D D ++RV + A + N +R M+ P A ++ Sbjct: 571 AMESQGRDIKMD----ERRVEGYRNFATKLWN-AARFAQANGIGASTMLEAPNATLAVNK 625 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST 446 I++ + +Q + + + A + V D Y + KP + + + Sbjct: 626 WIIAETVKTVQAVDLALADYRFDGAANAIYQFVWSRFCDWYLELIKP--VLQGGEEGGEE 683 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 V V+ Q+ +LL F+P + +++ + D + Sbjct: 684 TRAVAGWVLDQILVLLHPFMPFITEELWHAMGARDHD 720 Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 31/96 (32%) Query: 16 PNAQP--------------HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 PNA+P HIGHA + + D+L R RL G D L+ GTD Sbjct: 32 PNAEPWTIVNPPPNVTGNLHIGHALDNTLQDILVRHARLKGKDALWVVGTD--------- 82 Query: 62 AQNAGVTTKVFVDQ--NSRNFRDMADVLDISYDDFI 95 +AG+ T++ V++ N+R + D + D F+ Sbjct: 83 --HAGIATQMVVERQMNARGEKRT----DFTRDQFL 112 >gi|294142171|ref|YP_003558149.1| leucyl-tRNA synthetase [Shewanella violacea DSS12] gi|293328640|dbj|BAJ03371.1| leucyl-tRNA synthetase [Shewanella violacea DSS12] Length = 864 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 18/255 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y YP+ + H+GH I DV+AR+ RL G +VL G D G AA Sbjct: 33 KEKFYCLAMFPYPSGRLHMGHVRNYTIGDVIARYQRLQGKNVLQPIGWDSFGLPAENAAI 92 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 93 KNNTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLFEKGLVYK 152 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 S + DE +++V DG + V+ E +F +++ Y D+LL+ Sbjct: 153 KTSSVNWCPNDETVLANEQVI---DGCCWRCD-TVVEQKEIPQWFIKITEYADELLTDLD 208 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 + PE + ++R R+E I + S ++FD PD + YV I A Sbjct: 209 QLDEWPEQVKTMQRNWIGRSEGIEMTFKVVD----SEESFDIYTTRPDTVMGVTYVAI-A 263 Query: 235 LTNYLTTTGYLDNPD 249 + L ++NP+ Sbjct: 264 AGHPLAAQAAVNNPE 278 >gi|257468336|ref|ZP_05632430.1| valyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] gi|317062610|ref|ZP_07927095.1| valyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] gi|313688286|gb|EFS25121.1| valyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] Length = 886 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 10/152 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ P+ +K F+P V G DI+ F F L Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELETFYPTSTLVTGADIIFFWVARMIMFGLYEMK 508 Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 +P K VF HG + + G K+SKSLGN DP+ +IEE G DA+R+ ++ + G+D + Sbjct: 509 EIPFKDVFFHGIVRDELGRKMSKSLGNSPDPLNLIEEFGADAIRFSMIYNTSQGQDVHFS 568 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374 + L+ + + AN I N V+R V M L+ +D Sbjct: 569 EKLLE--MGRNFANKIWN-VARFVIMNLEGFD 597 >gi|146304446|ref|YP_001191762.1| valyl-tRNA synthetase [Metallosphaera sedula DSM 5348] gi|145702696|gb|ABP95838.1| valyl-tRNA synthetase [Metallosphaera sedula DSM 5348] Length = 808 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 124/265 (46%), Gaps = 18/265 (6%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLP 287 VW+D+ L +G+ +N +K +PAD+ + G DI+R Y + +L+ N+P Sbjct: 471 VWVDSSVTVLYLSGFYEN-KLRFSKTFPADVRLQGTDIIRTWLFYTFFRTLMLAGNVPF- 528 Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346 K+V HG +L G ++SKS GN + P++ I+E G DA+R L+ + + G D + D + Sbjct: 529 KRVIVHGQVLGPDGTRMSKSKGNNVSPMDRIDEFGADAIRMTLL-DASIGDDFPFKWDTV 587 Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 K + N + I + + P D+ IL+ +++ + + Sbjct: 588 KGKKLLLQKL--WNASRLAYPFI---HGRKLEKPEVLHPIDQWILAKHKEFVEKAIQAYE 642 Query: 407 NQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 NQ L+ + E D Y + K + + DR++T Y +++ L ILL Sbjct: 643 NQDFFVILSMLYEYFWETIADEYLELIK---HRLFSDDRSAT--YTLGRILKDLIILLHP 697 Query: 465 FVPKLANKIFDILFVADENRCFQSL 489 P + +I+ ++F ++ ++L Sbjct: 698 IAPHITEEIYSLIFGEKQSVLLETL 722 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 32/53 (60%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 E+ +I T + + + H+GHAY + IAD +ARF +L G +VLF G D G Sbjct: 48 EKPVFFIDTPPPFTSGELHMGHAYWVTIADAMARFKKLQGYNVLFPQGWDTQG 100 >gi|126700875|ref|YP_001089772.1| valyl-tRNA synthetase [Clostridium difficile 630] gi|115252312|emb|CAJ70153.1| valyl-tRNA synthetase [Clostridium difficile] Length = 888 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 23/258 (8%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWP-AFLLSANLPL 286 W + +T G+ P+ ++A ++P + V G DI+ F + A + N Sbjct: 454 TWFSSALWPFSTLGW---PNKTEALDYYYPTSVLVTGYDIIFFWVVRMAFAGMFCMNEKP 510 Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345 V HG + +G K+SKSLGN IDP+E+IE+ G DALR+ L G D Sbjct: 511 FDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADALRFTLT----TGNSPENDMRF 566 Query: 346 LKKRVN--ADLANGIGNLVSRSVSM-----ILKDYDGMIPTPGAFTESDESILSVCSRVL 398 +RV + AN + N SR V M I+K+ T +D+ I+S + ++ Sbjct: 567 YMERVEFARNFANKLWN-ASRFVFMNIDEDIIKNMTRE-SVKEDLTLADKWIISRANNIV 624 Query: 399 QEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 +E NM + AL ++ SE D Y + KP L + + S LY V+ Sbjct: 625 KEATNNMDKFDLGIALQKIYDFTWSEYCDWYIEMVKP-RLYGEDANAKSAALYTLTYVLE 683 Query: 457 QLAILLQAFVPKLANKIF 474 ++ LL ++P + +I+ Sbjct: 684 KILKLLHPYMPFITEEIY 701 >gi|170728031|ref|YP_001762057.1| leucyl-tRNA synthetase [Shewanella woodyi ATCC 51908] gi|238688645|sp|B1KDW0|SYL_SHEWM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|169813378|gb|ACA87962.1| leucyl-tRNA synthetase [Shewanella woodyi ATCC 51908] Length = 859 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 104/240 (43%), Gaps = 17/240 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+AR+ RL G +VL G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 92 KNSSAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 S + DE +++V DG + VQ E +F +++ Y D+LLS Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCDTEVVQ-KEIPQWFIKITDYADELLSDID 207 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 + PE + ++R R+E I ++ S ++FD PD + YV I A Sbjct: 208 QLDEWPEQVKTMQRNWIGRSEGIEMTFQ----VADSDESFDIYTTRPDTVMGVTYVAIAA 263 >gi|256787757|ref|ZP_05526188.1| valyl-tRNA synthetase [Streptomyces lividans TK24] Length = 777 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 7/178 (3%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284 ++ W + +T G+ + + S AKF+P + V G DIL F F L A Sbjct: 454 VLDTWFSSGLWPFSTLGWPEQTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 512 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P + HG + G+K+SKS GNV++P++ +++ G DALR+ L R G D + Sbjct: 513 PPFHTIALHGMVRDQNGKKMSKSFGNVVNPLDWMDKYGSDALRFTLARGANPGVDVPIGE 572 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 D ++ N AN I N +R M +G +P + +D ILS + V+ E+ Sbjct: 573 DWVQGSRN--FANKIWN-ATRFALMNGATVEGPLPDASRMSSTDRWILSRLNSVVAEV 627 >gi|149181773|ref|ZP_01860264.1| valyl-tRNA synthetase [Bacillus sp. SG-1] gi|148850514|gb|EDL64673.1| valyl-tRNA synthetase [Bacillus sp. SG-1] Length = 881 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANL 284 ++ W + +T G+ D +++P D V G DI+ F + + + Sbjct: 448 VLDTWFSSALWPFSTMGWPDTEAEDFKRYYPTDALVTGYDIIGFWVSRMIFQGLEFTGTR 507 Query: 285 PLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P V HG + G K+SKSLGN +DP+EVI++ G DALRY L + G+D Y Sbjct: 508 PF-NDVLIHGLVRAEDGRKMSKSLGNGVDPMEVIDQYGADALRYMLSTGSSPGQDLRYST 566 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399 + ++ N AN I N + L + DG+ I G + +D+ IL+ + ++ Sbjct: 567 EKVESVWN--FANKIWN----ASRFALMNMDGLKYEEIDLTGEKSAADKWILTRLNETIE 620 Query: 400 EI 401 + Sbjct: 621 TV 622 Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 25/175 (14%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56 ++EK + I PN + H+GHA++ + D+L R R+ G DVL+ G D G Sbjct: 36 DKEKEPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYDVLWLPGMDHAGIATQA 95 Query: 57 KIAKAAQNAGVT------------TKVFVDQNSRNFR----DMADVLDISYDDFIRTTEK 100 K+ + ++ G T T + ++ +++ R + LD S + F T ++ Sbjct: 96 KVEEKLRSEGTTRYDLGREKFLEETWKWKEEYAKHIRAQWSKLGLGLDYSRERF--TLDE 153 Query: 101 RHHDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 D + ++ + +KG IY+G Y W A + + +++ G +Y+ ++ Sbjct: 154 GLSDAVKEVFVTLYEKGLIYRGEYIINWDPATKTALSDIEVIHQDVQGAFYHMRY 208 >gi|124026858|ref|YP_001015973.1| valyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A] gi|123961926|gb|ABM76709.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A] Length = 933 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 81/297 (27%), Positives = 136/297 (45%), Gaps = 26/297 (8%) Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268 L+R+ + +KI D + ++ W + +T G+ D +++P + V G DI+ Sbjct: 463 LAREKYGDSVKIEQD-EDVLDTWFSSGLWPFSTLGWPDETHPDFQRWYPTNTLVTGFDII 521 Query: 269 RFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325 F + A + + +P V+ HG + + K+SKS GN IDP+ +IE G DAL Sbjct: 522 FFWVARMTMMAGVFTERMPF-ADVYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDAL 580 Query: 326 RYFLVREIA-CGKD---GFYDKDGLKKRVNA--DLANGIGNLVSRS-VSMILKDYDGMIP 378 R+ LVRE+A G+D F K+ V A + AN + N + +++ +DY+ + Sbjct: 581 RFALVREVAGAGQDIRLDFDRKNQTSATVEASRNFANKLWNATRFALINLEDQDYENLES 640 Query: 379 TPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWE 435 + + SD ILS +RV E +N + A + D Y + K Sbjct: 641 YDSSKLQLSDRWILSRLARVNHETANRYENYALGEAAKGLYEFAWNDFCDWYLELIKRRL 700 Query: 436 LKKTN------PDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 N DR A +VLY +V+ L I+L +P L +++ L DE++ Sbjct: 701 NNSENLSSDELLDRKIAKSVLY---KVLSDLLIMLHPLMPHLTEELWHGLTGLDEDQ 754 >gi|15805185|ref|NP_293872.1| valyl-tRNA synthetase [Deinococcus radiodurans R1] gi|12585355|sp|Q9RY06|SYV_DEIRA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|6457813|gb|AAF09735.1|AE001877_2 valyl-tRNA synthetase [Deinococcus radiodurans R1] Length = 913 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 92/385 (23%), Positives = 156/385 (40%), Gaps = 71/385 (18%) Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 PV+ + E +F ++ + D++L + ++P ER +V ++D ++SR+ + Sbjct: 366 PVEPIISEQWFVKMKPFADQVLEGLDKGEIKLVP-ERYTKVNRDWLENIRDWNISRQLW- 423 Query: 216 WGIKIP----------------------DDPQY----------IMYVWIDALTNYLTTTG 243 WG +IP DP+Y + W + +T G Sbjct: 424 WGHQIPAWYDKEGNIYVPDPENPELDCDQDPRYAHLNLRRDPDVFDTWFSSNLWPFSTLG 483 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILH-KG 300 + D KF+P + V G DIL F + + L+ P V HG L KG Sbjct: 484 WPDTDSEDFRKFYPTQVLVTGYDILFFWVARMQMAGYGLTGQAPF-STVMLHGLYLDAKG 542 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD-------KDGLKKRVNA- 352 +K+SKS GN IDP+E+ + GVDA R+ G+D +D ++ K NA Sbjct: 543 QKMSKSKGNGIDPLELFGQYGVDACRFAFTFLSTGGQDIKHDARRFEQGRNFANKLWNAT 602 Query: 353 ----------------DLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVC 394 DL+ + V+ ++L+ D + T +D I+S Sbjct: 603 RFALMRLGEARIEGSDDLSAYVRAAVTLPDGVLLRSKDVLAQLKERDDLTLADRWIISRL 662 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452 + V E + I A+ + S + D Y +A KP EL N +T+ V Sbjct: 663 NDVTAEASAQLDAFDIGAAIRTLYSFTWDEFCDWYIEAAKP-ELASGNLGTMATLKVVLE 721 Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477 V++ LL F+P + ++++ L Sbjct: 722 HVLK----LLHPFMPFITSELYAAL 742 >gi|72383119|ref|YP_292474.1| valyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A] gi|90101543|sp|Q46IA7|SYV_PROMT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|72002969|gb|AAZ58771.1| valyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A] Length = 933 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 81/297 (27%), Positives = 136/297 (45%), Gaps = 26/297 (8%) Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268 L+R+ + +KI D + ++ W + +T G+ D +++P + V G DI+ Sbjct: 463 LAREKYGDSVKIEQD-EDVLDTWFSSGLWPFSTLGWPDETHPDFQRWYPTNTLVTGFDII 521 Query: 269 RFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325 F + A + + +P V+ HG + + K+SKS GN IDP+ +IE G DAL Sbjct: 522 FFWVARMTMMAGVFTERMPF-ADVYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDAL 580 Query: 326 RYFLVREIA-CGKD---GFYDKDGLKKRVNA--DLANGIGNLVSRS-VSMILKDYDGMIP 378 R+ LVRE+A G+D F K+ V A + AN + N + +++ +DY+ + Sbjct: 581 RFALVREVAGAGQDIRLDFDRKNQTSATVEASRNFANKLWNATRFALINLEDQDYENLES 640 Query: 379 TPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWE 435 + + SD ILS +RV E +N + A + D Y + K Sbjct: 641 YDSSKLQLSDRWILSRLARVNHETANRYENYALGEAAKGLYEFAWNDFCDWYLELIKRRL 700 Query: 436 LKKTN------PDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484 N DR A +VLY +V+ L I+L +P L +++ L DE++ Sbjct: 701 NNSENLSSDELLDRKIAKSVLY---KVLSDLLIMLHPLMPHLTEELWHGLTGLDEDQ 754 >gi|313894560|ref|ZP_07828124.1| leucine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] gi|313440956|gb|EFR59384.1| leucine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] Length = 822 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 8/180 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + +EK Y+ YP+ H+GH I DV+ARF ++ G +VL G D G A Sbjct: 30 ESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMKGFNVLHPMGWDSFGMPAENA 89 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119 A G+ K + N N + L +SY D + T ++ ++ + +++ KG Sbjct: 90 AIKHGIAPKTWTLDNIENMKLQQKALGLSYDWDREVATCKEDYYKWTQWFFQQFYKKGLA 149 Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 YK W N+ + DG + N V+ + +F R++ Y D+LL+ Sbjct: 150 YKKEAKVNWCETCHTVLANEQVI----DGACWRCD-NTVEKKDLSQWFLRITEYADRLLT 204 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 28/203 (13%) Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 L+ AN P + + + G +L +G K+SKS GNV+ P E+I G D R F++ +D Sbjct: 560 LIEANEPF-RGLLTQGMVLKEGSKMSKSKGNVVSPEEIINTYGADTARLFILFAAPVDRD 618 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSR 396 + G++ G + R V I+ Y +G G T+ + + R Sbjct: 619 LDWSDQGVE---------GSYRFLGR-VWRIVDAYNEEGKKNVTGELTKDEFVLRRELHR 668 Query: 397 VLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV-LYVTVEV 454 V++++ E++ N + A++ ++ LV+ + + D+A T+ + E+ Sbjct: 669 VIKKVTEDLDNNFNFNTAISAIMELVNAM-------------YAHKDKADTINSALANEL 715 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 R L +LL FVP + +++ L Sbjct: 716 TRSLLLLLAPFVPHITEELWHEL 738 >gi|308189742|ref|YP_003922673.1| valine--tRNA ligase [Mycoplasma fermentans JER] gi|307624484|gb|ADN68789.1| valine--tRNA ligase [Mycoplasma fermentans JER] Length = 832 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 84/359 (23%), Positives = 158/359 (44%), Gaps = 57/359 (15%) Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208 Y + PV+ + +F ++ +L + +S +R VI + D + Sbjct: 342 YSERSNTPVETLVMPQWFVKMDKLAQDILDHLKSKDAVNFYPKRFVNVIKKWMENIHDWT 401 Query: 209 LSRKTFDWGIKIP----DDPQYIMYV-----WI---DALTNYLTTT----GYLDNPDGSK 252 +SR+ + WG +IP DD + W+ D L + ++ +L P + Sbjct: 402 ISRQLW-WGHRIPAWYKDDKVKVQIKSPGEGWVQDEDVLDTWFSSGIAPFSFLGWPKKTT 460 Query: 253 --AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----KVFSHGFILHK-GEKIS 304 +++P L V G DI+ F W A + L K +V HG + + G+K+S Sbjct: 461 LLKRYYPTSLLVTGYDIIFF----WVARMYFFGLEFMKQKPFDRVLIHGLVRDQFGKKMS 516 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS N IDPI+VI E G DALR+F++ + G D Y K+ + L N + N ++R Sbjct: 517 KSSNNGIDPIQVINENGSDALRWFMITNTSPGLDIRYSKEKITSAWG--LCNKLWN-IAR 573 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN---QLIHRALAQVISLV 421 + ++ +D + T +D I + + + I + MQN ++ L++ I Sbjct: 574 YIQLLPEDKE------NKKTAADIWIHNKLVALKKRIDKAMQNYEFTIVGTELSKFI--- 624 Query: 422 SEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 ++ W EL K P++ + ++ ++ L ++ F+P + + ++ +LF Sbjct: 625 ------YNDFSSWYVELLKIMPNKKA-----ALDNLKSLLLIAHPFLPFITDHLYKVLF 672 Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/45 (35%), Positives = 22/45 (48%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 HIGHA + I D + R+ +L G DV + G D G +N Sbjct: 50 HIGHALDTYIQDTIIRYKKLSGYDVFYVAGMDHAGIATQSKVENT 94 >gi|152978421|ref|YP_001344050.1| leucyl-tRNA synthetase [Actinobacillus succinogenes 130Z] gi|171704228|sp|A6VMB8|SYL_ACTSZ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|150840144|gb|ABR74115.1| leucyl-tRNA synthetase [Actinobacillus succinogenes 130Z] Length = 860 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + + YP+ + H+GH I DV++R+ R+ G +VL G D G AA Sbjct: 32 KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N ++ VL SYD + T ++ + + ++ KG +YK Sbjct: 92 KNNTAPAKWTYENIEYMKNQLKVLGFSYDWEREVTTCRPEYYKWEQWFFTELYKKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + DE +++V++G + PV+ E +F +++ Y ++LL + Sbjct: 152 KTSVVNWCPNDETVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEQLLGGLD 207 Query: 182 SHPEF 186 + PE+ Sbjct: 208 TLPEW 212 >gi|289432321|ref|YP_003462194.1| valyl-tRNA synthetase [Dehalococcoides sp. GT] gi|288946041|gb|ADC73738.1| valyl-tRNA synthetase [Dehalococcoides sp. GT] Length = 880 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 46/281 (16%) Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 M + +F ++ L S ILP ER N+V ++D +SR+ + WG + Sbjct: 361 MVSKQWFVKMEPLAKPALEAVNSGRIQILP-ERFNKVYQNWMENIRDWCISRQLW-WGHR 418 Query: 220 IP----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251 IP DP ++ W + +T G+ D + Sbjct: 419 IPVWYCPCGEMIVAKVDPTVCPKCGGTELEQDPD-VLDTWFSSGLWPHSTLGWPDQTEDL 477 Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFILH-KGEKISK 305 K +F+P + DI+ F W A ++ + +P + V+ HG I KGEK+SK Sbjct: 478 K-RFYPGTVMETAYDIIFF----WVARMIVMGMEDMNEVPFRTVYLHGLIRDDKGEKMSK 532 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 + GNVIDP++VI++ G DALR+ + + G D + L+ N AN + N SR Sbjct: 533 TKGNVIDPLKVIDQYGTDALRFAVTFGTSPGNDSKLGQTKLEAARN--FANKLWN-ASRF 589 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 V M L + + P D I+S +RV ++ M+ Sbjct: 590 VIMNLGEAKELTPE-AELPLEDRWIISRMNRVTADVTRLME 629 >gi|51246452|ref|YP_066336.1| leucyl-tRNA synthetase [Desulfotalea psychrophila LSv54] gi|60390691|sp|Q6AJZ7|SYL_DESPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|50877489|emb|CAG37329.1| probable leucyl-tRNA synthetase [Desulfotalea psychrophila LSv54] Length = 827 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 6/179 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +++EK Y+ YP+ + H+GH I DV+AR+ R+ G +VL G D G A Sbjct: 34 EDKEKYYLLEMFPYPSGRIHMGHVRNYTIGDVVARYKRMRGFNVLHPMGWDAFGLPAENA 93 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119 AQ V+ N R L +SY D + T +++ + L+ ++ +KG I Sbjct: 94 AQKNNTHPSVWTYDNIDYMRQQLQQLGLSYDWDREMATCNPKYYRQEQQLFIEMLEKGLI 153 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 Y+ + + + +++V +GA + H + G+FF+++ Y ++LL+ Sbjct: 154 YEKVTTVNWCDTCQTVLANEQVIEGACWRCDQLVHP----RKMNGWFFKITDYAEELLA 208 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 115/257 (44%), Gaps = 36/257 (14%) Query: 249 DGSKAKFWPA-DLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK 299 D +KAK+W A D ++ G + H +Y F L + P K+ + G ++ Sbjct: 524 DKAKAKYWLAVDQYIGGVEHAILHLLYSRFFTKVLRDLGYLEIDEPF-IKLLTQGMVIKD 582 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKS GNV+DP ++I E G D R F + +D + +G++ G Sbjct: 583 GTKMSKSKGNVVDPHDLISEFGADTTRLFSLFAAPPERDLEWSSEGVE---------GSS 633 Query: 360 NLVSRSVSMILKDYDGMIPT---PGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415 ++R I +++ + P +E D + + ++ + EN+++ + A++ Sbjct: 634 RFLNRIYRFITANFEALTAGEAFPKKLSEEDRLLHRKNHQTIKRVTENIEHNFHFNTAIS 693 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 V+ LV+++ F +K A VL +V+ + +LL VP N+++ Sbjct: 694 AVMELVNQLFAQFKNEKSIA--------APAVLRASVDSV---LLLLSPMVPHFCNEMWM 742 Query: 476 ILFVAD--ENRCFQSLD 490 +L + EN+ + D Sbjct: 743 VLGNTEPIENQAWPEFD 759 >gi|73748272|ref|YP_307511.1| valyl-tRNA synthetase [Dehalococcoides sp. CBDB1] gi|90103541|sp|Q3ZZG9|SYV_DEHSC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|73659988|emb|CAI82595.1| valyl-tRNA synthetase [Dehalococcoides sp. CBDB1] Length = 880 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 46/281 (16%) Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 M + +F ++ L S ILP ER N+V ++D +SR+ + WG + Sbjct: 361 MVSKQWFVKMEPLAKPALEAVNSGRIQILP-ERFNKVYQNWMENIRDWCISRQLW-WGHR 418 Query: 220 IP----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251 IP DP ++ W + +T G+ D + Sbjct: 419 IPVWYCPCGEMIVAKVDPTVCPKCGGTELEQDPD-VLDTWFSSGLWPHSTLGWPDQTEDL 477 Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFILH-KGEKISK 305 K +F+P + DI+ F W A ++ + +P + V+ HG I KGEK+SK Sbjct: 478 K-RFYPGTVMETAYDIIFF----WVARMIVMGMEDMNEVPFRTVYLHGLIRDDKGEKMSK 532 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 + GNVIDP++VI++ G DALR+ + + G D + L+ N AN + N SR Sbjct: 533 TKGNVIDPLKVIDQYGTDALRFAVTFGTSPGNDSKLGQTKLEAARN--FANKLWN-ASRF 589 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 V M L + + P D I+S +RV ++ M+ Sbjct: 590 VIMNLGEAKELTPE-AELPLEDRWIISRMNRVTADVTRLME 629 >gi|33862238|ref|NP_893799.1| valyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|81575511|sp|Q7UZI3|SYV_PROMP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|33634456|emb|CAE20141.1| Valyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 918 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/296 (23%), Positives = 138/296 (46%), Gaps = 30/296 (10%) Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266 LS + K F +++ D ++ W + +T G+ + D K++P + + G D Sbjct: 452 LSKATKEFGSNLQLIRDKD-VLDTWFSSGLWPFSTLGWPNINDADFKKWYPNSVLITGFD 510 Query: 267 ILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEE 319 I+ F W A + + N+P K V+ HG + +K+SKS GN IDP+ +I++ Sbjct: 511 IIFF----WVARMTMMGKTFTNNIPF-KDVYIHGLVRDENNKKMSKSSGNGIDPLLLIDK 565 Query: 320 VGVDALRYFLVREIA-CGKDGFYDKDGLKKRVNA-DLANGIGNLVSRSVSMILKDYDGMI 377 G DALR+ L+RE+A G+D D D + + + + N + + +L + Sbjct: 566 YGSDALRFALLREVAGAGQDIRLDYDRKENTSSTVEASRNFANKLWNATKFVL--INKTF 623 Query: 378 PTPGAFTESDESILSVCSR----VLQEIRENMQNQLIHRALAQVISLVSE------VDRY 427 + ESDE L + + L ++ + N LI L + L+ E D Y Sbjct: 624 SENCSLNESDEKNLELSDKWILSKLNQLNTKVSNLLIEYKLGESAKLLYEFAWNDFCDWY 683 Query: 428 FD-AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + A++ + K+T+ + S + ++V+ + +++ F+P + +++ L + E Sbjct: 684 VEFAKQKFNNKETHNRKISE--KILIKVLTDVLVMMHPFMPHITEELWHKLQIKPE 737 >gi|289771644|ref|ZP_06531022.1| valyl-tRNA synthetase [Streptomyces lividans TK24] gi|289701843|gb|EFD69272.1| valyl-tRNA synthetase [Streptomyces lividans TK24] Length = 780 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 7/178 (3%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284 ++ W + +T G+ + + S AKF+P + V G DIL F F L A Sbjct: 457 VLDTWFSSGLWPFSTLGWPEQTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 515 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P + HG + G+K+SKS GNV++P++ +++ G DALR+ L R G D + Sbjct: 516 PPFHTIALHGMVRDQNGKKMSKSFGNVVNPLDWMDKYGSDALRFTLARGANPGVDVPIGE 575 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 D ++ N AN I N +R M +G +P + +D ILS + V+ E+ Sbjct: 576 DWVQGSRN--FANKIWN-ATRFALMNGATVEGPLPDASRMSSTDRWILSRLNSVVAEV 630 >gi|256830217|ref|YP_003158945.1| valyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] gi|256579393|gb|ACU90529.1| valyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] Length = 887 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 109/243 (44%), Gaps = 43/243 (17%) Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189 LR +E Y+ Q Y + N ++ E+ +F + +K + E I P Sbjct: 333 LRACGSLTAEEPYENKVNQCYRCKTNIEPFVSEQ-WFVSVKPLAEKARAAVEDGRTTIWP 391 Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDP----------- 224 + +++ + ++D +SR+ + WG +IP +DP Sbjct: 392 AQWNKTYFNWLDN-IRDWCISRQLW-WGHRIPVWTCQDCGELIVAREDPTACACGSTRLL 449 Query: 225 --QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 + ++ W + +T G+ + + KA F+P L V G DIL F W A ++ Sbjct: 450 QDEDVLDTWFSSALWPFSTMGWPEQTNELKA-FYPTSLLVTGFDILFF----WVARMMMM 504 Query: 283 ------NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 N+P K V+ H + + G+K+SKS GNVIDP+ +I++ G D+LR+ L A Sbjct: 505 GLQFMDNVPF-KDVYIHALVRDEHGKKMSKSTGNVIDPLAMIDKYGCDSLRFTLTSFAAM 563 Query: 336 GKD 338 G+D Sbjct: 564 GRD 566 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 25/165 (15%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---------QKI 58 S I PN H+GHA + + D++ R+ R G VL+ GTD G + + Sbjct: 45 SIVIPPPNVTGALHMGHALNLTLQDIMCRYMRQRGKTVLWVPGTDHAGIATQNVVERKLL 104 Query: 59 AKAAQNAGVTTKVFV--------DQNSR---NFRDMADVLDISYDDFIRTTEKRHHDTCR 107 A+ + + + F+ D R R M +D S + F T ++ R Sbjct: 105 AEGTKREDLGREEFISRVWEWKEDYGGRILNQIRRMGASVDWSRERF--TMDEGLSKAVR 162 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYN 151 ++ + ++G +Y+G Y + R DDEV Y A Y+ Sbjct: 163 EVFVSLYEQGLVYRGKYIINWCTRCHTALADDEVEYAPAKSTLYH 207 >gi|163939986|ref|YP_001644870.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|163862183|gb|ABY43242.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] Length = 1033 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++ + G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKEKYEVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE NP++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNPEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust. Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I D++AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRAIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWNILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|238855288|ref|ZP_04645607.1| valine--tRNA ligase [Lactobacillus jensenii 269-3] gi|260664646|ref|ZP_05865498.1| valyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|282932419|ref|ZP_06337844.1| valine--tRNA ligase [Lactobacillus jensenii 208-1] gi|238832180|gb|EEQ24498.1| valine--tRNA ligase [Lactobacillus jensenii 269-3] gi|260561711|gb|EEX27683.1| valyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|281303368|gb|EFA95545.1| valine--tRNA ligase [Lactobacillus jensenii 208-1] Length = 879 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 39/268 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ +K L ++ + ER ++ + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLAEKALENQKTAGKIDFVPERFSQTFEQWMENVHDWVISRQLW-WGHRIPAWY 418 Query: 222 DDPQYIMYV--------------------WIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 + MYV W + +T G+ D +++P + Sbjct: 419 NKETGEMYVGEEAPKDIENWRQDEDVLDTWFSSALWPFSTLGWPDENAEDFKRYFPTNAL 478 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315 V G DI+ F W + ++ +L K+ V HG I +G K+SKSLGN IDP++ Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFTKQKPFDHVVLHGLIRDEQGRKMSKSLGNGIDPMD 534 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373 VI++ G DALR+FL+ A G+D + + N N I N SR V M L Sbjct: 535 VIDKYGADALRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPSDAK 591 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F +D+ I + ++E+ Sbjct: 592 PAHMPDVAKFDLADKWIFDRLNHTVKEV 619 Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 29/170 (17%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ I D L R R+ G D L+ G D G IA A+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTSIQDTLIRLKRMQGYDTLYLPGMDHAG--IATQAKVEAK 96 Query: 68 TTKVFVDQNS-------RNFRDMAD---------------VLDISYDDFIRTTEKRHHDT 105 K +D++ + D D LD S + F T +K Sbjct: 97 LRKQGLDRHQMGREKFVKQVWDWKDEYANIIKSQWAKLGLSLDYSRERF--TLDKGLSKA 154 Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 R ++ ++ ++G IY+G Y + + E +D EV +K G +Y+ ++ Sbjct: 155 VRKVFVQLYNEGLIYRGQYIINWDPKLETALSDIEVIHKDDKGAFYHIKY 204 >gi|104773811|ref|YP_618791.1| valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422892|emb|CAI97554.1| Valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 879 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 36/204 (17%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK+L + +R + + D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADKVLENQKGEGRVNFVPDRFEGTLERWMENVHDWVISRQLW-WGHRIPAWY 418 Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 D Q ++ W + +T G+ D +++P + Sbjct: 419 NKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFKRYFPTNAL 478 Query: 262 VIGKDILRFHAIYWPAFLLSANL------PLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314 V G DI+ F W + ++ +L P V HG I +G K+SKSLGN IDP+ Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFIGERPFDNVVL-HGLIRDEQGRKMSKSLGNGIDPM 533 Query: 315 EVIEEVGVDALRYFLVREIACGKD 338 +VI++ G DALR+FL+ A G+D Sbjct: 534 DVIDKYGADALRWFLLNGTAPGQD 557 Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 24/137 (17%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ I D L R+ R+ G D L+ G D G K+ + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRYKRMQGYDTLYLPGMDHAGIATQAKVEARLR 98 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 GV+ + FV++ ++ + LD S + F T +K R Sbjct: 99 EQGVSRYDLGREKFVEKVWEWKDEYANIIKSQWQKLGLSLDYSRERF--TLDKGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCY 124 ++ ++ ++G IY+G Y Sbjct: 157 RVFVQLYNEGLIYRGEY 173 >gi|147669052|ref|YP_001213870.1| valyl-tRNA synthetase [Dehalococcoides sp. BAV1] gi|146270000|gb|ABQ16992.1| valyl-tRNA synthetase [Dehalococcoides sp. BAV1] Length = 880 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 46/281 (16%) Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 M + +F ++ L S ILP ER N+V ++D +SR+ + WG + Sbjct: 361 MVSKQWFVKMEPLAKPALEAVNSGRIQILP-ERFNKVYQNWMENIRDWCISRQLW-WGHR 418 Query: 220 IP----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251 IP DP ++ W + +T G+ D + Sbjct: 419 IPVWYCPCGEMIVAKVDPTVCPKCGGTELEQDPD-VLDTWFSSGLWPHSTLGWPDQTEDL 477 Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFILH-KGEKISK 305 K +F+P + DI+ F W A ++ + +P + V+ HG I KGEK+SK Sbjct: 478 K-RFYPGTVMETAYDIIFF----WVARMIVMGMEDMNEVPFRTVYLHGLIRDDKGEKMSK 532 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 + GNVIDP++VI++ G DALR+ + + G D + L+ N AN + N SR Sbjct: 533 TKGNVIDPLKVIDQYGTDALRFAVTFGTSPGNDSKLGQTKLEAARN--FANKLWN-ASRF 589 Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406 V M L + + P D I+S +RV ++ M+ Sbjct: 590 VIMNLGEAKELTPE-AELPLEDRWIISRMNRVTADVTRLME 629 >gi|302545422|ref|ZP_07297764.1| valine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653] gi|302463040|gb|EFL26133.1| valine-tRNA ligase [Streptomyces himastatinicus ATCC 53653] Length = 877 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 7/178 (3%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284 ++ W + +T G+ + D S AKF+P + V G DIL F F L A Sbjct: 457 VLDTWFSSGLWPFSTLGWPEQTD-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 515 Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P + HG + + G+K+SKS GN ++P++ ++ G DA+R+ L R G D + Sbjct: 516 PPFHTIALHGMVRDQFGKKMSKSFGNAVNPLDWMDAYGSDAVRFTLARGANPGVDVPIGE 575 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 D ++ N AN I N +R M +G +P P + +D ILS + V+ ++ Sbjct: 576 DWVQASRN--FANKIWN-ATRFALMNGATVEGELPAPERLSATDRWILSRLNEVVADV 630 >gi|254464224|ref|ZP_05077635.1| valyl-tRNA synthetase [Rhodobacterales bacterium Y4I] gi|206685132|gb|EDZ45614.1| valyl-tRNA synthetase [Rhodobacterales bacterium Y4I] Length = 1023 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/136 (33%), Positives = 75/136 (55%), Gaps = 13/136 (9%) Query: 212 KTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269 ++FD +++P DP ++ W + + T G+ + + +K K++P V G+DIL Sbjct: 568 RSFDGPMQVPMFRDPD-VLDTWFSSGLWPIGTLGWPEWTEETK-KYFPTSTLVTGQDILF 625 Query: 270 F---HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV 320 F + +L NLP+ ++ V+ HG + KG+K+SKS GNV+DP+E+IEE Sbjct: 626 FWVARMMMMQLAVLDENLPVKERIPFDTVYLHGLVRDAKGKKMSKSTGNVVDPLEIIEEF 685 Query: 321 GVDALRYFLVREIACG 336 G DALR+ A G Sbjct: 686 GADALRFSSAAMAALG 701 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75 H+GHA+ + D+L R+ R+ G D L+ GTD +AG+ T++ V++ Sbjct: 53 HMGHAFNNTLQDILIRWKRMQGYDTLWQPGTD-----------HAGIATQMVVER 96 >gi|269961555|ref|ZP_06175917.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833596|gb|EEZ87693.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 857 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 25/258 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++RF RL G +V+ G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N ++ +L YD +F T + ++ + + K+ +KG +Y Sbjct: 92 KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177 K S + D+ +++V DG + PV+ E +F +++ Y +L L Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206 Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231 E PE + ++R R+E + F G +DL + PD + YV Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEVYTTR-------PDTLMGVTYVG 259 Query: 232 IDALTNYLTTTGYLDNPD 249 I A + L T +NP+ Sbjct: 260 I-AAGHPLATIAAENNPE 276 >gi|170751800|ref|YP_001758060.1| valyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831] gi|170658322|gb|ACB27377.1| valyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831] Length = 905 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 23/262 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ PD ++ A+++P + V GKDIL +W A ++ L Sbjct: 472 VLDTWFSSALWPFSTLGW---PDSTQELARYYPTNTLVTGKDIL----FFWVARMMMMGL 524 Query: 285 PLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 L + LH G K+SKS GNV+DP+E+I++VG D LR+ L G+D Sbjct: 525 HLTDRAPFETVYLHTLVRDASGAKMSKSKGNVVDPLELIDQVGADVLRFTLCALAVQGRD 584 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398 D ++ N A + N +R + D A + L+ +R + Sbjct: 585 IKLSTDRVQGYRN--FATKLWN-AARFAELNGCRLDPAFDPRSATGAINRWALTEAARAV 641 Query: 399 QEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKP-WELKKTNPD-RASTVLYVTVEV 454 E+ ++ + A A V + D Y + KP + + +P RA T V + Sbjct: 642 DEVTGALEAFRFNDAAAAAYRFVWNIFCDWYLELAKPVLQGEGVDPAIRAETQASVAF-L 700 Query: 455 IRQLAILLQAFVPKLANKIFDI 476 I Q+A LL F+P L +++ I Sbjct: 701 IDQVAKLLHPFMPFLTEELWAI 722 Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 11/55 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75 H+GHA + D+L RF R+ G DVL+ GTD +AG+ T++ V++ Sbjct: 52 HMGHALNNTLQDILCRFERMRGKDVLWQPGTD-----------HAGIATQMVVER 95 >gi|113461693|ref|YP_719762.1| leucyl-tRNA synthetase [Haemophilus somnus 129PT] gi|122945429|sp|Q0I5C5|SYL_HAES1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|112823736|gb|ABI25825.1| leucyl-tRNA synthetase [Haemophilus somnus 129PT] Length = 860 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++R+ R++G +VL G D G AA Sbjct: 32 KEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMNGKNVLQPMGWDAFGLPAEGAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N ++ VL + D I T + ++ + + ++ KG +YK Sbjct: 92 KNKTAPAKWTYENIEYMKNQLKVLGFGFDWDREITTCKPEYYKWEQWFFTELYKKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + DE +++V++G + PV+ E +F +++ Y ++LLS + Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLSDLD 207 Query: 182 SHPEF 186 PE+ Sbjct: 208 QLPEW 212 >gi|170718612|ref|YP_001783813.1| leucyl-tRNA synthetase [Haemophilus somnus 2336] gi|189030281|sp|B0URM9|SYL_HAES2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|168826741|gb|ACA32112.1| leucyl-tRNA synthetase [Haemophilus somnus 2336] Length = 860 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++R+ R++G +VL G D G AA Sbjct: 32 KEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMNGKNVLQPMGWDAFGLPAEGAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N ++ VL + D I T + ++ + + ++ KG +YK Sbjct: 92 KNKTAPAKWTYENIEYMKNQLKVLGFGFDWDREITTCKPEYYKWEQWFFTELYKKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + DE +++V++G + PV+ E +F +++ Y ++LLS + Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGGCWRC----DTPVEQKEIPQWFIKITDYAEQLLSDLD 207 Query: 182 SHPEF 186 PE+ Sbjct: 208 QLPEW 212 >gi|313471900|ref|ZP_07812392.1| valine--tRNA ligase [Lactobacillus jensenii 1153] gi|313449025|gb|EEQ68181.2| valine--tRNA ligase [Lactobacillus jensenii 1153] Length = 883 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 39/268 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ +K L ++ + ER ++ + D +SR+ + WG +IP Sbjct: 364 WFVKMKPLAEKALENQKTAGKIDFVPERFSQTFEQWMENVHDWVISRQLW-WGHRIPAWY 422 Query: 222 DDPQYIMYV--------------------WIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 + MYV W + +T G+ D +++P + Sbjct: 423 NKETGEMYVGEEAPKDIENWRQDEDVLDTWFSSALWPFSTLGWPDENAEDFKRYFPTNAL 482 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315 V G DI+ F W + ++ +L K+ V HG I +G K+SKSLGN IDP++ Sbjct: 483 VTGYDIIFF----WVSRMIFQSLHFTKQKPFDHVVLHGLIRDEQGRKMSKSLGNGIDPMD 538 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373 VI++ G DALR+FL+ A G+D + + N N I N SR V M L Sbjct: 539 VIDKYGADALRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPSDAK 595 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401 +P F +D+ I + ++E+ Sbjct: 596 PAHMPDVAKFDLADKWIFDRLNHTVKEV 623 Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 29/170 (17%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ I D L R R+ G D L+ G D G IA A+ Sbjct: 43 SIVIPPPNVTGKLHLGHAWDTSIQDTLIRLKRMQGYDTLYLPGMDHAG--IATQAKVEAK 100 Query: 68 TTKVFVDQNS-------RNFRDMAD---------------VLDISYDDFIRTTEKRHHDT 105 K +D++ + D D LD S + F T +K Sbjct: 101 LRKQGLDRHQMGREKFVKQVWDWKDEYANIIKSQWAKLGLSLDYSRERF--TLDKGLSKA 158 Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 R ++ ++ ++G IY+G Y + + E +D EV +K G +Y+ ++ Sbjct: 159 VRKVFVQLYNEGLIYRGQYIINWDPKLETALSDIEVIHKDDKGAFYHIKY 208 >gi|169604544|ref|XP_001795693.1| hypothetical protein SNOG_05286 [Phaeosphaeria nodorum SN15] gi|160706593|gb|EAT87677.2| hypothetical protein SNOG_05286 [Phaeosphaeria nodorum SN15] Length = 559 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 86/394 (21%), Positives = 157/394 (39%), Gaps = 58/394 (14%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV ARF R G + L+ GTDE+G A Sbjct: 17 VLITSALPYVNNVPHLGNIIGSVLSADVFARFARARGYNTLYVCGTDEYGTATETKAIEE 76 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 VT + D+ ++ + +IS+D F RT + D + ++KK+ G + + + Sbjct: 77 KVTPQQLCDKYFALHSEVYEWFNISFDHFGRTPTQHQTDIAQDIFKKLYKNGYLEEQTTT 136 Query: 126 GWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWM-------- 160 Y +++ D V Y+ A G Q H NP + Sbjct: 137 QPYCETHKSFLADRFVEGTCPLCNYEDARGDQCDKCGHLLDPLELKNPRCKLDGATPVPR 196 Query: 161 EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 E + + L Q K ++ ++ E S++K GL+ ++R WG Sbjct: 197 ETKHVYLCLDKLQPKEEEWFKKASQEGNWSSNGIQITASWLKEGLRPRGITRD-LKWGTA 255 Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279 +P + + NP+ K +GKD + FH + +P Sbjct: 256 VPLEK-------------------WWHNPEQVKL------YQFMGKDNVPFHTVVFPCSQ 290 Query: 280 LSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIAC 335 + + + + ++ ++ K SKS N+ ++ G+ D RY+L+ Sbjct: 291 IGTGDKWTMLNTISTTEYLNYEKGKFSKSR-NIGVFGNNAKDTGIPSDVWRYYLLSHRPE 349 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 D ++ DG N +L +GN V+R + + Sbjct: 350 TGDTEFEWDGFIAANNNELLKNLGNFVNRVIKFV 383 >gi|15640019|ref|NP_219472.1| valyl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Nichols] gi|189026258|ref|YP_001934030.1| valyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] gi|6094417|sp|O83998|SYV_TREPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|3323365|gb|AAC26589.1| valyl-tRNA synthetase (valS) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018833|gb|ACD71451.1| valyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] Length = 956 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/250 (28%), Positives = 107/250 (42%), Gaps = 41/250 (16%) Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279 I DP ++ W + +T G+ +A F+P + DI+ F W A + Sbjct: 484 ITQDPD-VLDTWFSSWLWPFSTLGWPQETQKLRA-FYPTSAVITAYDIIFF----WVARM 537 Query: 280 LSANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 + A L + V+ HG + K G K+SKSL N +DP+ +I G DALR+ L Sbjct: 538 IMAGLEFTQTVPFRDVYLHGLVRDKQGRKMSKSLNNGVDPLHIIRTYGADALRFTLAFMC 597 Query: 334 ACGKDGFYDKDGLKKRVNADLANGI--------GNLVSRSVSMILKDYDGMIPTPGAFTE 385 A G+D + D K + + AN + GNL R V I + TE Sbjct: 598 AQGQDVLIEMDSFK--MGSRFANKVWNASRYILGNLEGRRVYAIAHV---------SLTE 646 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDA-----QKPWELKK 438 D I + +Q++R ++ + A V S D Y +A QKP E +K Sbjct: 647 LDRWIFHTFNETVQQVRTALEAYRFNDAAQAVYEFFWNSFCDWYVEASKCSFQKPDEQEK 706 Query: 439 TNPDRASTVL 448 DRA++VL Sbjct: 707 ---DRAASVL 713 Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 25/176 (14%) Query: 12 AIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNA 65 AI PN H+GH ++ D++ R+ R+ G L+ GTD G + +A + Sbjct: 65 AIPPPNITGVLHMGHCLNTVLQDIVIRYQRMAGACTLWIPGTDHAGIATQHVVERALRKE 124 Query: 66 G-----VTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109 G VT + FV + + R M D + + F T + + R Sbjct: 125 GIHKREVTREQFVARTQQIKDSHQDTIRMQLRKMGASCDWTCERF--TLDAGMSASVREA 182 Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHNPVQWMEEEG 164 + + ++G +Y+ Y + R +DDEV+ + DG Y ++ + EEEG Sbjct: 183 FVTLYERGLLYRSMYLVNWCPRCGTALSDDEVFHQEKDGALYYVRYPLLPRTEEEG 238 >gi|291060395|gb|ADD73130.1| valyl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Chicago] Length = 984 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/250 (28%), Positives = 107/250 (42%), Gaps = 41/250 (16%) Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279 I DP ++ W + +T G+ +A F+P + DI+ F W A + Sbjct: 512 ITQDPD-VLDTWFSSWLWPFSTLGWPQETQKLRA-FYPTSAVITAYDIIFF----WVARM 565 Query: 280 LSANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 + A L + V+ HG + K G K+SKSL N +DP+ +I G DALR+ L Sbjct: 566 IMAGLEFTQTVPFRDVYLHGLVRDKQGRKMSKSLNNGVDPLHIIRTYGADALRFTLAFMC 625 Query: 334 ACGKDGFYDKDGLKKRVNADLANGI--------GNLVSRSVSMILKDYDGMIPTPGAFTE 385 A G+D + D K + + AN + GNL R V I + TE Sbjct: 626 AQGQDVLIEMDSFK--MGSRFANKVWNASRYILGNLEGRRVYAIAHV---------SLTE 674 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDA-----QKPWELKK 438 D I + +Q++R ++ + A V S D Y +A QKP E +K Sbjct: 675 LDRWIFHTFNETVQQVRTALEAYRFNDAAQAVYEFFWNSFCDWYVEASKCSFQKPDEQEK 734 Query: 439 TNPDRASTVL 448 DRA++VL Sbjct: 735 ---DRAASVL 741 Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 25/176 (14%) Query: 12 AIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNA 65 AI PN H+GH ++ D++ R+ R+ G L+ GTD G + +A + Sbjct: 93 AIPPPNITGVLHMGHCLNTVLQDIVIRYQRMAGACTLWIPGTDHAGIATQHVVERALRKE 152 Query: 66 G-----VTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109 G VT + FV + + R M D + + F T + + R Sbjct: 153 GIHKREVTREQFVARTQQIKDSHQDTIRMQLRKMGASCDWTCERF--TLDAGMSASVREA 210 Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHNPVQWMEEEG 164 + + ++G +Y+ Y + R +DDEV+ + DG Y ++ + EEEG Sbjct: 211 FVTLYERGLLYRSMYLVNWCPRCGTALSDDEVFHQEKDGALYYVRYPLLPRTEEEG 266 >gi|71083063|ref|YP_265782.1| leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062] gi|71062176|gb|AAZ21179.1| Leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062] Length = 844 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 8/179 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K ++K Y YP+ + H+GH I DVLAR+ L G +VL G D G A Sbjct: 29 KTKKKFYCLEMFPYPSGKIHMGHVRNYTIGDVLARYKTLQGYNVLHPMGWDSFGMPAENA 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ + K + + N + R L +S +D I T + ++ + + + DKG + Sbjct: 89 ARQNNLDPKTWTESNIKTMRSQLKKLGLSIDWDKEISTCSEDYYKHQQEFFLDLYDKGLV 148 Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y K Y W + DE +++V DG+ + + V+ + +FF +S + + LL Sbjct: 149 YRKENYVNWDPV-DETVLANEQV---VDGKGWRSGAT-VERKKLNQWFFNISKFSEDLL 202 >gi|229133026|ref|ZP_04261867.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196] gi|228650444|gb|EEL06438.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196] Length = 1033 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++ + G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKEKYEVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE NP++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNPEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I D++AR + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRAIKDLVARHKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWNILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|21221073|ref|NP_626852.1| valyl-tRNA synthetase [Streptomyces coelicolor A3(2)] gi|12643416|sp|O06851|SYV_STRCO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|6983757|emb|CAB75396.1| valyl tRNA synthetase [Streptomyces coelicolor A3(2)] Length = 874 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 7/178 (3%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284 ++ W + +T G+ + + S AKF+P + V G DIL F F L A Sbjct: 454 VLDTWFSSGLWPFSTLGWPEQTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 512 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P + HG + G+K+SKS GNV++P++ +++ G DALR+ L R G D + Sbjct: 513 PPFHTIALHGMVRDQNGKKMSKSFGNVVNPLDWMDKYGSDALRFTLARGANPGVDVPIGE 572 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 D ++ N AN I N +R M +G +P + +D ILS + V+ E+ Sbjct: 573 DWVQGSRN--FANKIWN-ATRFALMNGATVEGPLPDASRMSSTDRWILSRLNSVVAEV 627 >gi|227821920|ref|YP_002825890.1| valyl-tRNA synthetase [Sinorhizobium fredii NGR234] gi|227340919|gb|ACP25137.1| valyl-tRNA synthetase [Sinorhizobium fredii NGR234] Length = 947 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 31/267 (11%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285 ++ W + +T G+ + P+ K++ D+ V G DI+ F W A ++ L Sbjct: 509 VLDTWFSSALWPFSTLGWPTETPE--LEKYYQTDVLVTGFDIIFF----WVARMMMMGLH 562 Query: 286 LPK-----------KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 K V+ H + K G+K+SKS GNVIDP+E+I+E G DALR+ L Sbjct: 563 FMKDADGTPVEPFHTVYVHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMA 622 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393 A G+D D + N + N + DG IP + T + IL+ Sbjct: 623 AQGRDVKLDPARIAGYRN--FGTKLWNATRFAEMNGATSSDGFIPEAASLT-VNRWILTE 679 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP---WELKKTNPDRASTVL 448 SR ++++ E ++ + A + + D Y + KP E + + + V Sbjct: 680 LSRTIRDVTEAVEGYRFNDAAGSLYRFIWNQFCDWYLELLKPVFGGEDEAAKRESQACVA 739 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFD 475 YV E + LL F+P + +++D Sbjct: 740 YVLDETYK----LLHPFMPFMTEELWD 762 Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 11/56 (19%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76 H+GHA + DV+ RF R+ G DVL+ G D +AG+ T++ V++ Sbjct: 52 HMGHALNNTLQDVMVRFERMRGKDVLWQPGMD-----------HAGIATQMVVERQ 96 >gi|319408777|emb|CBI82434.1| Valyl-tRNA synthetase [Bartonella schoenbuchensis R1] Length = 907 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 87/377 (23%), Positives = 157/377 (41%), Gaps = 46/377 (12%) Query: 130 LRDEAYYNDDEVYKGA--DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--YYESH-- 183 L D+ Y N E+ K A + Q P W E+ YF + Q +S + H Sbjct: 382 LTDQWYVNAAELAKPAVEAVRQGKTQFVPASW--EKTYFNWMENIQPWCISRQLWWGHQI 439 Query: 184 -----PEFILPIERRNE--VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236 P+ ++ +E+ E ++S + K++ L+R Q ++ W + Sbjct: 440 PAWYGPDGVIFVEKSEEEALVSALSHYGKEVQLTRD------------QDVLDTWFSSAL 487 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS------ANLPLPKKV 290 +T G+ + K F+P L V G DI+ F W A ++ +P P V Sbjct: 488 WPFSTLGWPEKTTELKT-FYPTSLSVTGFDIIFF----WVARMMMMGIHFIGEVPFPT-V 541 Query: 291 FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 + H + H G K+SKS GNVIDP+E+I++ DALR+ L A G+D D + Sbjct: 542 YVHALVRDHTGAKMSKSKGNVIDPLELIDQYSADALRFTLAIMAAQGRDVKLDPSRVAGY 601 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 N A + N + ++ P T + I++ S+ + + +++ Sbjct: 602 RN--FATKLWNATRFAEMNGVRHGLPFKPEEAKLT-FNRWIVTELSKTVSAVTAGIESYK 658 Query: 410 IHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 + A + + V + D Y + KP + ++ D T V+ ++ LL F+P Sbjct: 659 FNEAASALYRFVWNTLCDWYLEFLKP-VFQGSDEDSKKEAQACTAWVLDEVYKLLHPFMP 717 Query: 468 KLANKIFDILFVADENR 484 + K++ + ++ R Sbjct: 718 HMTEKLWSLTTMSGTKR 734 >gi|254456291|ref|ZP_05069720.1| valyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] gi|207083293|gb|EDZ60719.1| valyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] Length = 875 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 22/276 (7%) Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268 L+ K + +++ DP ++ W + T G+ DN D + KF+P + V G DI+ Sbjct: 432 LANKHYGKDVELIRDPD-VLDTWFSSGLWPFATLGWPDNKDYVE-KFYPTSVLVTGFDII 489 Query: 269 RFHAIYWPAFLLS-----ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGV 322 F W A ++ N K ++ H + KG+K+SKS GNVIDP+++IE+ Sbjct: 490 FF----WVARMIMFGTEFLNKEPFKDIYVHALVRDEKGQKMSKSKGNVIDPLDLIEKYSA 545 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVN--ADLANGIGNLVSRSVSMILKDYDGMIPTP 380 DALR+ L+ + G D +D +K N L N L++ D+ + Sbjct: 546 DALRFTLLSMASPGTDVKLSEDRVKGYRNFLNKLWNANNFLITNEC-----DFTNIDKIS 600 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKK 438 ++ I + +I +N+++ A S D Y + K L Sbjct: 601 NLSININKWIYAELIDAKSKIEKNLEDYRFDEAAKNAYQFAWHSYCDWYLELSKT-ILFS 659 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 N + S V V+ + +Q+ ILL F+P + +I+ Sbjct: 660 DNEEAKSEVKKVSSYIFKQILILLHPFIPFVTEEIW 695 Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA I D+L R+HR++ + L+ GTD G + Sbjct: 35 SIVIPPPNVTGSLHMGHALNNSIQDLLVRYHRMNNYETLWQPGTDHAGIATQALVERKLT 94 Query: 68 TTKV 71 T K+ Sbjct: 95 TEKI 98 >gi|317968252|ref|ZP_07969642.1| valyl-tRNA synthetase [Synechococcus sp. CB0205] Length = 915 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 22/280 (7%) Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHA 272 F G + DP + W + +T G+ NP+ + + W P + V G DI+ F Sbjct: 450 FGAGAVLEQDPD-ALDTWFSSGLWPFSTMGW-PNPEAADLQRWYPTSVLVTGFDIIFFWV 507 Query: 273 --IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 + A + +P + V+ HG + K+SKS GN IDP+ +IE G DALR+ L Sbjct: 508 ARMTMMAGAFTGQMPF-QDVYIHGLVRDENNRKMSKSAGNGIDPLLLIERYGADALRFAL 566 Query: 330 VREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PG 381 VRE+A G+D D D + + N + + L + G P+ P Sbjct: 567 VREVAGAGQDIRLDYDRKSDTSATVEASRNFANKLWNATRFALMNLGGETPSSLGEPDPA 626 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEV-DRYFDAQKPWELKKT 439 A +D ILS +RV ++ E + + A + +EV D Y + K Sbjct: 627 ALQLADRWILSRLARVNRDSAERYGSYGLGEAAKGLYEFAWNEVCDWYVELIKRRLNPGE 686 Query: 440 NPDRAS-----TVLYVTVEVIRQLAILLQAFVPKLANKIF 474 NP + T V + + +L ++L +P L+ +++ Sbjct: 687 NPSAEALADQRTARQVLAKALNELLVMLHPLMPHLSEELW 726 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 S I PN H+GHA+ + D + RF RL G +VL GTD Sbjct: 40 SVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGKNVLCLPGTD 84 >gi|310816641|ref|YP_003964605.1| valyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] gi|308755376|gb|ADO43305.1| valyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] Length = 1028 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 19/131 (14%) Query: 223 DPQYIMY-VWIDA------LTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAI 273 DP ++Y VW DA ++ L G L P+ + AK++P ++ V G DI+ F Sbjct: 581 DPTVLVYPVWRDADVLDTWFSSGLWPIGTLGWPEQTPELAKYFPTNVLVTGFDIIFF--- 637 Query: 274 YWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 W A ++ L + K V+ H + KG+K+SKSLGNV+DP+ +I+E G DA+R+ Sbjct: 638 -WVARMMMMQLAVVDDVPFKTVYVHALVRDEKGKKMSKSLGNVLDPLVLIDEYGADAVRF 696 Query: 328 FLVREIACGKD 338 L A G+D Sbjct: 697 TLTAMAAMGRD 707 Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 13/68 (19%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA+ + D+L R+HR+ G D L+ G D +AG+ Sbjct: 39 SIVIPPPNVTGSLHMGHAFNNTLQDILTRWHRMRGFDTLWQPGQD-----------HAGI 87 Query: 68 TTKVFVDQ 75 T++ V++ Sbjct: 88 ATQMVVER 95 >gi|124024602|ref|YP_001018909.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303] gi|123964888|gb|ABM79644.1| t-RNA synthetase, class Ia:Valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303] Length = 947 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/287 (23%), Positives = 118/287 (41%), Gaps = 28/287 (9%) Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269 +R F + I D + ++ W + +T G+ D ++P V G DI+ Sbjct: 482 ARDQFGEAVVIQQD-EDVLDTWFSSGLWPFSTMGWPDQESADLECWYPTSTLVTGFDIIF 540 Query: 270 FHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALR 326 F + A + +P V+ HG + + K+SKS GN IDP+ +IE G DALR Sbjct: 541 FWVARMTMMAGAFTGRMPF-ADVYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALR 599 Query: 327 YFLVREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPT----- 379 + LVRE+A G+D D D + A N + + L + G P Sbjct: 600 FALVREVAGAGQDIRLDYDRKSDTSATVEAARNFANKLWNATRFALMNLGGETPASLGEP 659 Query: 380 -PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436 P + +D ILS +R+ +++ E + + A + D Y + K Sbjct: 660 DPASLQLADRWILSRLARMTRDVAERYDSYRLGEAAKCLYEFAWNDICDWYLELSK---- 715 Query: 437 KKTNPDR---------ASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 ++ +P T V +V+ L ++L +P L+ +++ Sbjct: 716 RRLHPGEDPSDEVLADQCTARQVLAKVLADLLVMLHPLMPHLSEELW 762 Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 S I PN H+GHA+ + D + RF RL G +VL GTD Sbjct: 71 SVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGKNVLCLPGTD 115 >gi|270307798|ref|YP_003329856.1| valyl-tRNA synthetase [Dehalococcoides sp. VS] gi|270153690|gb|ACZ61528.1| valyl-tRNA synthetase [Dehalococcoides sp. VS] Length = 880 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 75/281 (26%), Positives = 122/281 (43%), Gaps = 44/281 (15%) Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 M + +F ++ L S ILP ER +V ++D +SR+ + WG + Sbjct: 361 MVSKQWFVKMEPLAKPALEAVNSGRIQILP-ERFTKVYQNWMENIRDWCISRQLW-WGHR 418 Query: 220 IP-------------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSK 252 IP +DP ++ W + +T G+ D + K Sbjct: 419 IPVWYCPCGEMIVSKEDPTACPKCGCTQLEQDPDVLDTWFSSGLWPHSTLGWPDQTEDLK 478 Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFILH-KGEKISKS 306 +F+P + DI+ F W A ++ + +P + V+ HG I KGEK+SK+ Sbjct: 479 -RFYPGSVLETAYDIIFF----WVARMIVMGIEDMKEVPFRTVYLHGLIRDDKGEKMSKT 533 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 GNVIDP++VI++ G DALR+ + + G D + L+ N AN + N SR V Sbjct: 534 KGNVIDPLKVIDQYGTDALRFAVTFGTSPGNDSKLGQTKLEAARN--FANKLWN-ASRFV 590 Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 M L + ++P D ILS +RV ++ M+ Sbjct: 591 IMNLGEGKELLPE-AELPLEDRWILSRMNRVTADVTRLMEE 630 >gi|156973531|ref|YP_001444438.1| leucyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116] gi|166231652|sp|A7MY86|SYL_VIBHB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|156525125|gb|ABU70211.1| hypothetical protein VIBHAR_01222 [Vibrio harveyi ATCC BAA-1116] Length = 862 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 18/257 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++RF RL G +V+ G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N ++ +L YD +F T + ++ + + K+ +KG +Y Sbjct: 92 KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177 K S + D+ +++V DG + PV+ E +F +++ Y +L L Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206 Query: 178 SYYESHPEFILPIER----RNEVISFVKSGLKDLSL-SRKTFDWGIKIPDDPQYIMYVWI 232 E PE + ++R R+E + ++ LKD + ++ + PD + YV I Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVE-LRFALKDSEVKGQQDLEVYTTRPDTLMGVTYVGI 265 Query: 233 DALTNYLTTTGYLDNPD 249 A + L T +NP+ Sbjct: 266 -AAGHPLATIAAENNPE 281 >gi|260900739|ref|ZP_05909134.1| leucine--tRNA ligase [Vibrio parahaemolyticus AQ4037] gi|308108996|gb|EFO46536.1| leucine--tRNA ligase [Vibrio parahaemolyticus AQ4037] Length = 728 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 25/258 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++RF RL G +V+ G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N ++ +L YD +F T + ++ + + K+ +KG +Y Sbjct: 92 KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177 K S + D+ +++V DG + PV+ E +F +++ Y +L L Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206 Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231 E PE + ++R R+E + F G +DL + PD + YV Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEVYTTR-------PDTLMGVTYVG 259 Query: 232 IDALTNYLTTTGYLDNPD 249 I A + L T +NP+ Sbjct: 260 I-AAGHPLATLAAENNPE 276 >gi|257125348|ref|YP_003163462.1| valyl-tRNA synthetase [Leptotrichia buccalis C-1013-b] gi|257049287|gb|ACV38471.1| valyl-tRNA synthetase [Leptotrichia buccalis C-1013-b] Length = 881 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 74/294 (25%), Positives = 132/294 (44%), Gaps = 20/294 (6%) Query: 199 FVKSGLKDLSL-SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257 FV L++ + +R+ F + + ++ ++ W + +T G+ + + K KF+P Sbjct: 425 FVAKSLEEAKIQAREKFGKDVNLTEETD-VLDTWFSSALWPFSTLGWPNETEDLK-KFFP 482 Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVI 311 + V G DIL F W A ++ +L + + V+ HG I KG K+SKSLGN Sbjct: 483 TNALVTGADILFF----WVARMVMMSLYIKDEIPFNYVYLHGIIRDEKGRKMSKSLGNSP 538 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 DP+++I + G DA+R+ + + G+D + + L+ + + AN + N SR V L+ Sbjct: 539 DPLDLIAKYGADAIRFSFLYNTSQGQDIHFSEKLLE--MGSAFANKVWN-ASRFVLSNLE 595 Query: 372 DYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428 D+D D+ ILS + I ENM+ + A D Y Sbjct: 596 DFDVSTTVDKSELKLEDKWILSKLQTASKLINENMEKYELDAAAKLTYEFFRGDFCDWYV 655 Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + K + D+ +V V+ + +L F+P + +I+ L +E Sbjct: 656 EIAKTRVYGQEGSDKV-VAQWVLRHVLDKGLKMLHPFMPFITEEIWQKLQTGEE 708 Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 26/182 (14%) Query: 5 EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58 EK S AI PN H+GH I D + R+ R+ G D L+ G D G K+ Sbjct: 35 EKPGYSIAIPPPNVTGILHMGHMLNNSIQDTIIRYKRMSGFDTLWIPGMDHAGIATQNKV 94 Query: 59 AKAAQNAGVTTKV-----FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRH 102 + + G + + F+ + ++ R + LD + + F T ++ Sbjct: 95 ERMLADEGTSKEEIGYDEFLRRTWEWKEKHGGLITKQLRKLGVSLDWTRERF--TMDEGL 152 Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWME 161 + + ++ K+ + G IY+G Y + D+ DDEV ++ +G+ + ++ P++ + Sbjct: 153 SEAVKEVFIKLYNDGLIYRGEYIVNWCPHDKTALADDEVNHEDKNGKIWEIRY-PIKDSD 211 Query: 162 EE 163 EE Sbjct: 212 EE 213 >gi|229011487|ref|ZP_04168675.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048] gi|228749778|gb|EEL99615.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048] Length = 1033 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++ + G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPEEKYEVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE NP++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNPEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust. Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I D++AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRAIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWNILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|328953428|ref|YP_004370762.1| leucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] gi|328453752|gb|AEB09581.1| leucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] Length = 832 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 9/197 (4%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 + ++ K Y+ YP+ + H+GH I DV+AR+ + G ++L G D G Sbjct: 29 LSDKSKYYVLEMFPYPSGRIHMGHVRNYTIGDVVARYKHMQGFNILHPMGWDAFGMPAEN 88 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118 AA GV + +N R L SYD + T + ++ + ++ ++ +G Sbjct: 89 AALAHGVHPAAWTYENIDYMRRQLKSLGYSYDWSRELATCDPDYYRWEQSVFIEMFRRGL 148 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 YK + + +++V GA + H PV E E +FF+++ Y ++LL Sbjct: 149 AYKKLSPVNWCDHCQTVLANEQVEDGACWRC----HQPVALRELEQWFFKITDYVEELLE 204 Query: 179 YYE---SHPEFILPIER 192 Y + PE +L ++R Sbjct: 205 YCDRLPGWPERVLTMQR 221 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 35/248 (14%) Query: 243 GYLDNPDGSKAKFWPA-DLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSH 293 G LD P + +W A D ++ G + H +Y F + + P ++ + Sbjct: 518 GILDRP---RVNYWMAVDQYIGGIEHAVLHLLYARFFTKVLRDLGYIQVDEPF-TRLLTQ 573 Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 G +L G K+SKS GNV+DP E+I G D R F + KD + G+ Sbjct: 574 GMVLMDGAKMSKSKGNVVDPNELIGTYGADTTRLFCLFAAPPEKDLEWSDQGVAGAFR-- 631 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 N I +LV +L+ P G E S L+ +R+ + +Q IHRA Sbjct: 632 FLNRIWSLVKE----LLESLKSAPPWRGTGAE--------LSPELRRLRQKV-HQTIHRA 678 Query: 414 LAQV-------ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466 + + ++ + ++ D K E T+P V E I L ++L Sbjct: 679 TSDIEARFHFNTAIAALMELVNDLYKAREEPATDPSSNHLAASVWREAIEVLILILSPMA 738 Query: 467 PKLANKIF 474 P LA +++ Sbjct: 739 PHLAEELW 746 >gi|319778238|ref|YP_004129151.1| Isoleucyl-tRNA synthetase [Taylorella equigenitalis MCE9] gi|317108262|gb|ADU91008.1| Isoleucyl-tRNA synthetase [Taylorella equigenitalis MCE9] Length = 941 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 19/205 (9%) Query: 230 VWIDALTNYLTTTGYLDNP-DGSKAK--FWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 VW D+ + ++T G D +GS WPADL++ G D R FH+ + ++ Sbjct: 533 VWFDSGSTHITVNGGRDQEFNGSHKNDLTWPADLYLEGSDQHRGWFHSSLLTSSMIYGRA 592 Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K + +HGF++ +G K+SKS+GNVI P +V + +G + +R + G+ D+ Sbjct: 593 PY-KSLLTHGFVVDGQGRKMSKSVGNVIAPKQVADTLGAEIIRLWTAATDYSGELSISDQ 651 Query: 344 DGLK-----KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398 + +R+ + +GNL S L D D M+ E D +++ S++ Sbjct: 652 ILKRVVESYRRIRNTICFLLGNLHDFDASKDLIDTDNML-------EVDRYAVAIASQLS 704 Query: 399 QEIRENMQNQLIHRALAQVISLVSE 423 ++I + H A+++ + SE Sbjct: 705 EQITSLYEKFEFHPAVSRFQTYCSE 729 Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 26/55 (47%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58 R K ++ Y N HIGHA I+ D++ + + G D + G D HG I Sbjct: 32 RPKFILNDGPPYANGDIHIGHAVNKILKDIIIKSKSMAGFDAPYIPGWDCHGMPI 86 >gi|315658074|ref|ZP_07910946.1| valine--tRNA ligase [Staphylococcus lugdunensis M23590] gi|315496403|gb|EFU84726.1| valine--tRNA ligase [Staphylococcus lugdunensis M23590] Length = 876 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%) Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240 ++D ++SR+ + WG +IP + + ++ W + + Sbjct: 398 IRDWTISRQLW-WGHQIPAWYHKETGEIYVAEQAPKDIENWEQDEDVLDTWFSSALWPFS 456 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGF 295 T G+ + +++P + + G DI+ F W A ++ L ++ V HG Sbjct: 457 TLGWPNESADDFKRYYPTNALITGYDIIFF----WVARMIFQGLEFTERRPFQDVLLHGL 512 Query: 296 I-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + G K+SKSLGN +DP++VIEE G D+LRYFL + G D Y + ++ N Sbjct: 513 VRAEDGRKMSKSLGNGVDPMDVIEEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--F 570 Query: 355 ANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEI 401 N I N S+ I +D+ I G + +D+ IL+ + ++ + Sbjct: 571 INKIWNGARFSLMNIGEDFAVEDIDLSGNLSLADKWILTRLNETIETV 618 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 38 TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAG 85 >gi|289550579|ref|YP_003471483.1| Valyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|289180111|gb|ADC87356.1| Valyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] Length = 876 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%) Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240 ++D ++SR+ + WG +IP + + ++ W + + Sbjct: 398 IRDWTISRQLW-WGHQIPAWYHKETGEIYVAEQAPKDIENWEQDEDVLDTWFSSALWPFS 456 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGF 295 T G+ + +++P + + G DI+ F W A ++ L ++ V HG Sbjct: 457 TLGWPNESADDFKRYYPTNALITGYDIIFF----WVARMIFQGLEFTERRPFQDVLLHGL 512 Query: 296 I-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 + G K+SKSLGN +DP++VIEE G D+LRYFL + G D Y + ++ N Sbjct: 513 VRAEDGRKMSKSLGNGVDPMDVIEEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--F 570 Query: 355 ANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEI 401 N I N S+ I +D+ I G + +D+ IL+ + ++ + Sbjct: 571 INKIWNGARFSLMNIGEDFAVEDIDLSGNLSLADKWILTRLNETIETV 618 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 38 TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAG 85 >gi|189030336|sp|Q2GDQ6|SYL_NEOSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS Length = 831 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 49/90 (54%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +R+K Y+ + YP+ + HIGH +I DVLAR+ R G +VL G D G KAA Sbjct: 25 QRKKYYVLSMFPYPSGKLHIGHLRNYVIGDVLARYKRSQGYNVLHPIGWDAFGLPAEKAA 84 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92 N+ + +++ ++N R + +SYD Sbjct: 85 INSNIHPRIWTEKNIAKMRTSLKSIGLSYD 114 >gi|242242928|ref|ZP_04797373.1| valyl-tRNA synthetase [Staphylococcus epidermidis W23144] gi|242233643|gb|EES35955.1| valyl-tRNA synthetase [Staphylococcus epidermidis W23144] Length = 886 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 18/261 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 453 VLDTWFSSALWPFSTLGWPDTNADDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 508 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 509 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 568 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I + + I G + +D+ IL+ + + Sbjct: 569 YSTEKVESVWN--FINKIWNAARFSLMNIGEGFKVEDIDLSGNLSLADQWILTRLNETIS 626 Query: 400 ---EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 E+ + + + RAL I D Y + K + + + T V V+ Sbjct: 627 TVTELSDKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNGEDESQKQTTRSVLSYVLD 684 Query: 457 QLAILLQAFVPKLANKIFDIL 477 ++ +L F+P + I+ L Sbjct: 685 KIMKMLHPFMPFVTETIWQSL 705 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 40 EDKSKEAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAG 95 >gi|88608827|ref|YP_506390.1| leucyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] gi|88600996|gb|ABD46464.1| leucyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] Length = 851 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 49/90 (54%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +R+K Y+ + YP+ + HIGH +I DVLAR+ R G +VL G D G KAA Sbjct: 45 QRKKYYVLSMFPYPSGKLHIGHLRNYVIGDVLARYKRSQGYNVLHPIGWDAFGLPAEKAA 104 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92 N+ + +++ ++N R + +SYD Sbjct: 105 INSNIHPRIWTEKNIAKMRTSLKSIGLSYD 134 >gi|260363864|ref|ZP_05776616.1| leucine--tRNA ligase [Vibrio parahaemolyticus K5030] gi|308114636|gb|EFO52176.1| leucine--tRNA ligase [Vibrio parahaemolyticus K5030] Length = 660 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 25/258 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++RF RL G +V+ G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N ++ +L YD +F T + ++ + + K+ +KG +Y Sbjct: 92 KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177 K S + D+ +++V DG + PV+ E +F +++ Y +L L Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206 Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231 E PE + ++R R+E + F G +DL + PD + YV Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEVYTTR-------PDTLMGVTYVG 259 Query: 232 IDALTNYLTTTGYLDNPD 249 I A + L T +NP+ Sbjct: 260 I-AAGHPLATLAAENNPE 276 >gi|206896117|ref|YP_002247032.1| isoleucyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] gi|206738734|gb|ACI17812.1| isoleucyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] Length = 906 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 70/143 (48%), Gaps = 15/143 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 I+ VW D+ ++ L+ DG + WPADL++ G D R F A L Sbjct: 524 ILDVWFDSGVSHYAV---LEQYDGMR---WPADLYLEGYDQHRGWFQTSLLTAVPLKGQA 577 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-----REIACGKD 338 P K V SHGF+L G +SKSLGNVIDP +V+ VG D LR L+ +I G++ Sbjct: 578 PY-KTVLSHGFVLDESGRAMSKSLGNVIDPSDVVANVGADVLRLALLMSDYTADIQVGQN 636 Query: 339 GFYDKDGLKKRVNADLANGIGNL 361 F + K++ GNL Sbjct: 637 IFNQASEIYKKIRNTFRFMEGNL 659 >gi|260898991|ref|ZP_05907432.1| leucine--tRNA ligase [Vibrio parahaemolyticus Peru-466] gi|308087477|gb|EFO37172.1| leucine--tRNA ligase [Vibrio parahaemolyticus Peru-466] Length = 820 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 25/258 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++RF RL G +V+ G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N ++ +L YD +F T + ++ + + K+ +KG +Y Sbjct: 92 KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177 K S + D+ +++V DG + PV+ E +F +++ Y +L L Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206 Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231 E PE + ++R R+E + F G +DL + PD + YV Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEVYTTR-------PDTLMGVTYVG 259 Query: 232 IDALTNYLTTTGYLDNPD 249 I A + L T +NP+ Sbjct: 260 I-AAGHPLATLAAENNPE 276 >gi|28897501|ref|NP_797106.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|153839855|ref|ZP_01992522.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810] gi|31077000|sp|Q87RQ0|SYL_VIBPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|28805713|dbj|BAC58990.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|149746627|gb|EDM57615.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810] Length = 857 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 25/258 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++RF RL G +V+ G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N ++ +L YD +F T + ++ + + K+ +KG +Y Sbjct: 92 KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177 K S + D+ +++V DG + PV+ E +F +++ Y +L L Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206 Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231 E PE + ++R R+E + F G +DL + PD + YV Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEVYTTR-------PDTLMGVTYVG 259 Query: 232 IDALTNYLTTTGYLDNPD 249 I A + L T +NP+ Sbjct: 260 I-AAGHPLATLAAENNPE 276 >gi|73968521|ref|XP_858962.1| PREDICTED: similar to methionine-tRNA synthetase isoform 4 [Canis familiaris] Length = 546 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/265 (23%), Positives = 108/265 (40%), Gaps = 32/265 (12%) Query: 9 ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N PH+G+ ++ ADV AR+ RL + + GTDE+G A G+ Sbjct: 268 ITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTFYLCGTDEYGTATETKAMEEGL 327 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 328 TPQEICDKYHAIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLTRGFVLQDTVEQL 387 Query: 128 YSLRDEAYYNDDEV--------YKGADG------------------QYYNAQHNPVQWME 161 R + D V Y+ A G Q + PV Sbjct: 388 RCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCRSCPVV-KS 446 Query: 162 EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 + F L + +L + ++ P R + S+++ GLK ++R WG + Sbjct: 447 SQHLFLDLPKLEKRLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGTPV 505 Query: 221 PDD--PQYIMYVWIDALTNYLTTTG 243 P + + YVW DA YL+ T Sbjct: 506 PLEGFEDKVFYVWFDATIGYLSITA 530 >gi|329897211|ref|ZP_08271951.1| Leucyl-tRNA synthetase [gamma proteobacterium IMCC3088] gi|328921366|gb|EGG28760.1| Leucyl-tRNA synthetase [gamma proteobacterium IMCC3088] Length = 810 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 9/195 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +REK Y YP+ + H+GH IADV+ARF R+ G +VL G D G AA Sbjct: 29 KREKFYCLAMFPYPSGKLHMGHVRNYTIADVIARFQRMLGKNVLQPMGWDAFGLPAENAA 88 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 V + N RD L +YD + T E ++ + + ++ +KG Y Sbjct: 89 IKNNVPPAAWTADNINYMRDQLKRLGFAYDWTREVTTCEPDYYRWEQWFFTRLFEKGLAY 148 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178 K + D +++V DG + NPV+ + +F +++ Y ++LL+ Sbjct: 149 KKQAEVNWCETDNTVLANEQV---VDGCCWRCD-NPVERRNIDQWFIKITDYAEQLLNDI 204 Query: 179 -YYESHPEFILPIER 192 + PE + ++R Sbjct: 205 DQLDGWPEQVKTMQR 219 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 19/183 (10%) Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKI 303 A +W P D +V G + H +Y F L++++ P K++ + G +L G K+ Sbjct: 516 ANYWLPVDQYVGGIEHAILHLLYARFFHKLLRDEGLVNSDEPF-KRLLTQGMVLKDGAKM 574 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GN +DP +I+ G D +R F + + + G+ +G + Sbjct: 575 SKSKGNTVDPQALIDSYGADTVRLFSMFAAPPEQSLEWSDAGV---------DGAHRFLK 625 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R M + DG TP + + + + + + + Q + A+A V+ L +E Sbjct: 626 RLWRMAFEHIDGTADTPEKPLTAKDVRRKLHETIAKVTDDYGRRQTFNTAIAAVMELCNE 685 Query: 424 VDR 426 + R Sbjct: 686 LVR 688 >gi|78484824|ref|YP_390749.1| leucyl-tRNA synthetase [Thiomicrospira crunogena XCL-2] gi|123555907|sp|Q31IE8|SYL_THICR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|78363110|gb|ABB41075.1| leucyl-tRNA synthetase [Thiomicrospira crunogena XCL-2] Length = 877 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 21/244 (8%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++RF R+ G +VL G D G AA Sbjct: 40 KEKFYCLSMFPYPSGKLHMGHVRNYTIGDVVSRFQRMQGKNVLQPMGWDAFGLPAENAAM 99 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR---ILWKKISDKGDIY 120 + V + QN R+ L + Y D+ R H + R L+ ++ +KG +Y Sbjct: 100 DNQVAPAKWTYQNIDYMRNQLKRLGLGY-DWTREVATCHPEYYRWEQWLFTRLMEKGLVY 158 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178 + + D+ +++V DG+ + + PV+ E +F R++ Y ++LL+ Sbjct: 159 RKLSVVNWDPVDQTVLANEQVI---DGKGWRS-GVPVERKEIAQWFLRITDYAEELLTDL 214 Query: 179 -YYESHPEFILPIERR-------NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230 E PE + +++ E+ + SGL + + S K + PD + YV Sbjct: 215 DQLEGWPEQVKTMQKNWIGKSTGLEIEFPIASGLDESNGSLKVY---TTRPDTLMGVTYV 271 Query: 231 WIDA 234 + A Sbjct: 272 AVAA 275 >gi|311069521|ref|YP_003974444.1| leucyl-tRNA synthetase [Bacillus atrophaeus 1942] gi|310870038|gb|ADP33513.1| leucyl-tRNA synthetase [Bacillus atrophaeus 1942] Length = 804 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%) Query: 3 EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 E+ K Y YP+ A H+GH D+L+R R+ G DVL G D G + Sbjct: 29 EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQY 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G +F QN NFR L SY D I TT+ ++ + ++ K+ +KG Sbjct: 89 ALDTGNDPAIFTKQNIDNFRRQIQALGFSYDWDREINTTDPGYYKWTQWIFLKLYEKGLA 148 Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 Y W N++ + DG+ H PV+ + +++AY D+LL Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYADRLLD 203 Query: 179 YYES--HPEFILPIER 192 E PE I ++R Sbjct: 204 DLEELDWPESIKDMQR 219 Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 10/84 (11%) Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-HKGEKIS 304 K+ P D+++ G + H +Y W FL + +P K +++ G IL EK+S Sbjct: 520 KWLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGV-VPTKEPFQQLYNQGMILGENNEKMS 578 Query: 305 KSLGNVIDPIEVIEEVGVDALRYF 328 KS GNV++P E++ G D LR + Sbjct: 579 KSKGNVVNPDEIVSSHGADTLRLY 602 >gi|258404389|ref|YP_003197131.1| valyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] gi|257796616|gb|ACV67553.1| valyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] Length = 886 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 80/321 (24%), Positives = 135/321 (42%), Gaps = 68/321 (21%) Query: 204 LKDLSLSRKTFDWGIKIP--------------DDP--------------QYIMYVWIDAL 235 ++D +SR+ + WG +IP +DP + ++ W + Sbjct: 403 IRDWCISRQIW-WGHRIPAWTCQECGKLIVSREDPTVCPDCGHTSLHQDEDVLDTWFSSA 461 Query: 236 TNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 +T G+ PD ++ A F+P + V G DIL F W A ++ L +V H Sbjct: 462 LWPFSTLGW---PDETQELATFYPTSVLVTGFDILFF----WVARMMMMGLHFKDEVPFH 514 Query: 294 GFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +H G K+SKS GNVIDP++++ + G DALR+ L A G+D + Sbjct: 515 DVYIHALVRDEDGRKMSKSTGNVIDPLDMVAKYGTDALRFTLTAFAAMGRDIKLS----E 570 Query: 348 KRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGA------FTESDESILSVCSRVLQ 399 KR+ N I N ++ + D P P E + L+ Sbjct: 571 KRIEGYRHFMNKIWNAARFALMHLPGDMGEPEPDPSDSLVHRWILHRLEEVKQAVGAALE 630 Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL---KKTNPDRASTVLYVTVEVIR 456 E R N Q +++ + + D Y + KP EL + +RA +VL+ V+R Sbjct: 631 EYRFNDAAQELYQFVWHEV-----CDWYLEMVKP-ELYGEDEAAKNRARSVLHT---VLR 681 Query: 457 QLAILLQAFVPKLANKIFDIL 477 ++ +LL +P + +I++ L Sbjct: 682 EVLVLLHPTIPFITAEIWNSL 702 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN H+GHA + + D+L R++R G VL+ GTD G + KA Sbjct: 43 SIVIPPPNVTGTLHMGHALNLTLQDILCRYNRQKGKKVLWVPGTDHAGIATQNVVEKALA 102 Query: 64 NAGVTTK 70 G T + Sbjct: 103 QEGTTRQ 109 >gi|187477909|ref|YP_785933.1| isoleucyl-tRNA synthetase [Bordetella avium 197N] gi|123725187|sp|Q2L2K5|SYI_BORA1 RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|115422495|emb|CAJ49020.1| isoleucyl-tRNA synthetase [Bordetella avium 197N] Length = 953 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 15/203 (7%) Query: 230 VWIDALTNYLTTTGYLDNP-DGSKAK--FWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 VW D+ + + T G D+ GS + WPADL++ G D R FH+ +L Sbjct: 546 VWFDSGSTHATVLGGKDHALHGSHGEQLAWPADLYLEGSDQHRGWFHSSLLTGCMLYGQP 605 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K + +HGF++ +G K+SKS+GNVI P +V + +G + LR ++ G+ D+ Sbjct: 606 PY-KGLLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGELSISDE 664 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM---IPTPGAFTESDESILSVCSRVLQE 400 + KRV + I N + R + + D+DG+ +P G E D L + +++ E Sbjct: 665 --ILKRV-VEGYRRIRNTL-RFLLANVADFDGVNQAVPY-GDLLEIDRYALVMTAQMQAE 719 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 ++ + Q+ H A++++ + SE Sbjct: 720 VQAHYQSYDFHPAVSRLQTFCSE 742 Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust. Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 16/135 (11%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58 K R + Y N HIGHA I+ D++ + + G D + G D HG I Sbjct: 45 KGRPLFILHDGPPYANGDIHIGHAVNKILKDIIVKSRSMAGYDAPYVPGWDCHGMPIEIQ 104 Query: 59 --AKAAQNAGVT-----TKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 K +N VT + + +D+ ++F+ + VL + ++ D R Sbjct: 105 VEKKFGKNLPVTEVHAKARAYALEQLDRQRQDFKRLG-VLGDWDNPYLTMNFSNEADEIR 163 Query: 108 ILWKKISDKGDIYKG 122 +L +I +KG +++G Sbjct: 164 VL-ARILEKGYVFRG 177 >gi|226355541|ref|YP_002785281.1| valyl-tRNA synthetase [Deinococcus deserti VCD115] gi|226317531|gb|ACO45527.1| putative valine--tRNA ligase (Valyl-tRNA synthetase) [Deinococcus deserti VCD115] Length = 920 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 93/389 (23%), Positives = 157/389 (40%), Gaps = 77/389 (19%) Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 PV+ + +F R+ + D++L + E L ER +V ++D ++SR+ + Sbjct: 371 PVEPIVSTQWFVRMKPFADQVLEGLDKG-EIKLTPERYTKVNRDWLENIRDWNISRQLW- 428 Query: 216 WGIKIP----------------------DDPQY----------IMYVWIDALTNYLTTTG 243 WG +IP DP+Y + W + +T G Sbjct: 429 WGHQIPAWYDDEGNIYVPDPEKPDLDCDKDPRYAHLNLRRDQDVFDTWFSSNLWPFSTLG 488 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKG 300 + D KF+P + V G DIL F + + L+ P V HG L KG Sbjct: 489 WPDTDAEDFRKFYPTQVLVTGYDILFFWVARMQMAGYGLTGRAPF-STVMLHGLYLDAKG 547 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKS GN +DP+E+ ++ GVDA R+ G+D +D ++ N AN + N Sbjct: 548 QKMSKSKGNGVDPLELFDQYGVDACRFAFTFLSTGGQDIKHDPRRFEQGRN--FANKLWN 605 Query: 361 L------------------------VSRSV----SMILKDYD--GMIPTPGAFTESDESI 390 V R+V + +L+ G++ T T +D I Sbjct: 606 ATRFALMRLGEAAPNMTDDENLSAYVRRAVVPGNADLLRSQAVLGVLRTRDDLTLADRWI 665 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL 448 +S + V QE ++ I A+ + S + D Y +A KP + R T L Sbjct: 666 ISRLNAVTQEATAQLEAFDIGAAIRTLYSFTWDEFCDWYIEAAKP----ALSEGRLGT-L 720 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V+ + LL F+P + +++++ L Sbjct: 721 GTLKAVLEHILKLLHPFMPFVTSELYEAL 749 Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 11/56 (19%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76 H+GHA + + D L RF R+ G + LF GTD +AG++T+V V++ Sbjct: 62 HLGHALDNTLIDTLIRFKRMRGFEALFLPGTD-----------HAGISTQVVVERQ 106 >gi|172039171|ref|YP_001805672.1| valyl-tRNA synthetase [Cyanothece sp. ATCC 51142] gi|171700625|gb|ACB53606.1| valyl-tRNA synthetase [Cyanothece sp. ATCC 51142] Length = 909 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 80/300 (26%), Positives = 137/300 (45%), Gaps = 32/300 (10%) Query: 199 FVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256 F+ + + +L + D+G I++ DP ++ W + +T G+ DN K ++ Sbjct: 439 FIVAHSEQEALEKAKKDYGDTIQLEQDPD-VLDTWFSSGLWPFSTLGWPDNTQDLKT-YY 496 Query: 257 PADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313 P V G DI+ F + A + +P + V+ HG + G+K+SKS N IDP Sbjct: 497 PTSTLVTGFDIIFFWVARMTMMAGYFTDKMPF-QDVYIHGLVRDENGKKMSKSSNNGIDP 555 Query: 314 IEVIEEVGVDALRYFLVREIA-CGKDGF--YDK---DGLKKRVNADLANGIGNLVSRSVS 367 + +IE+ G DALRY L++E+A G+D YD+ + + + AN + N +R V Sbjct: 556 LILIEKYGTDALRYTLIKEVAGAGQDISLQYDRKTDESESVEASRNFANKLWN-AARFVM 614 Query: 368 MILKDYDGMIPTPGAFTE------SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 M LK G P E SD ILS + +Q+ R++++ + A + + Sbjct: 615 MHLK---GETPQSLGTPEIDKLELSDRWILSRFHQTVQQTRDDIKAYGLGEAAKGLYEFI 671 Query: 422 --SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D Y + K W+ + T+ YV ++ LL F+P + +I+ L Sbjct: 672 WGDFCDWYIELVKTRLWDETPSREVARQTLAYVLDGTLK----LLHPFMPHITEEIWQTL 727 Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 S I PN H+GHA+E + DVL R+HR+ G + L GTD Sbjct: 45 SIVIPPPNVTGSLHMGHAFEDCLMDVLVRYHRMCGYNTLCLPGTD 89 >gi|124485230|ref|YP_001029846.1| valyl-tRNA synthetase [Methanocorpusculum labreanum Z] gi|124362771|gb|ABN06579.1| valyl-tRNA synthetase [Methanocorpusculum labreanum Z] Length = 865 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 20/256 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285 ++ W+D+ L TG+ DGS + ++PA L G DI+R A Y L S L Sbjct: 448 VLDTWMDSSITDLHVTGW----DGSGRPPYFPAQLRPQGHDIIRTWAFY--TILRSVALL 501 Query: 286 LPK---KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341 K + +G +L + G K+SKS NVI P +V+ GVDALR + + G+D + Sbjct: 502 GEKPWDNILVNGMVLGEDGFKMSKSRDNVIGPEDVMGPYGVDALRQWAAAGSSTGQDILF 561 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQE 400 + + + + + N+V S+ I K + +P T T D +L+ S+ + E Sbjct: 562 NWNDVV--AASRFQTKMWNIVRFSLMQIQK--ESPVPETDAPSTLIDRWMLANLSKTVAE 617 Query: 401 IRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 + E+M L + L + V D Y + K L +P RA + Y + L Sbjct: 618 VTESMDAYLFDKGLKIIREFAWNVMADEYLEFVKG-RLYSEDPLRAGAI-YTLKTTLDAL 675 Query: 459 AILLQAFVPKLANKIF 474 +L ++P A + + Sbjct: 676 CTMLSPYIPFFAQECY 691 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 4/94 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ + + T YP + HIGHA + D++AR+ R+ G +V+F G D HG Sbjct: 35 KKPQYVMDTPPPYPTGKLHIGHALNWVYMDIIARYKRMMGFNVMFPQGWDCHGLPTEVKV 94 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96 + TK D + FR M D++ ++ R Sbjct: 95 EETHHITK--NDVSREEFRKMCR--DLTVENITR 124 >gi|254482596|ref|ZP_05095835.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] gi|214037287|gb|EEB77955.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] Length = 819 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 9/194 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK Y YP+ + H+GH IADV+AR+ R+ G +VL G D G AA Sbjct: 32 REKFYCLAMFPYPSGKLHMGHVRNYTIADVIARYQRMQGKNVLQPMGWDAFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 V + QN R+ L +Y D I T + ++ + + ++ +KG YK Sbjct: 92 KNNVPPAHWTAQNIDYMREQLRQLGFAYDWDREIATCDPDYYRWEQWFFTRLFEKGLAYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 + D+ +++V DG + NPV+ E + +F +++ Y ++LL+ Sbjct: 152 KKAEVNWCETDQTVLANEQV---VDGCCWRCD-NPVERREIDQWFIKITDYAEQLLTDLD 207 Query: 179 YYESHPEFILPIER 192 + PE + ++R Sbjct: 208 KLDQWPEQVRTMQR 221 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 10/87 (11%) Query: 251 SKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGE 301 +A +W P D +V G + H +Y + L+S++ P ++ + G +L G Sbjct: 520 GEADYWTPVDQYVGGIEHAILHLLYSRFYHKLLRDEGLVSSDEPF-IRLLTQGMVLKDGA 578 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYF 328 K+SKS GN +DP +I++ G D +R F Sbjct: 579 KMSKSKGNTVDPQSLIDQYGADTVRLF 605 >gi|226330822|ref|ZP_03806340.1| hypothetical protein PROPEN_04743 [Proteus penneri ATCC 35198] gi|225201617|gb|EEG83971.1| hypothetical protein PROPEN_04743 [Proteus penneri ATCC 35198] Length = 122 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 4/108 (3%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 KL ++ A+ Y N H+GH E I AD+ R+ R+ G +V F D HG I AQ Sbjct: 7 KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113 G+T + +++ S+ + +ISYD++ T H + R L KI Sbjct: 67 GITPEAMIEEMSKEHQQDFAGFNISYDNYHST----HSEESRQLSTKI 110 >gi|169832008|ref|YP_001717990.1| leucyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] gi|238688343|sp|B1I5R7|SYL_DESAP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|169638852|gb|ACA60358.1| leucyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] Length = 826 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 74/176 (42%), Gaps = 6/176 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K Y YP+ H+GH I DV+ARF + G DVL G D G AA Sbjct: 32 RPKYYCLEMFPYPSGNLHMGHVRNYAIGDVVARFKTMRGYDVLHPMGWDAFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 GV + N R +L +SYD + T ++ + L+ + +G YK Sbjct: 92 QHGVPPARWTWDNINVMRTQLKLLGVSYDWRRELATCHPGYYRWTQWLFLQFYHRGLAYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 + +++V G + A V+ E E +FFR++AY D+LL Sbjct: 152 AKAPVNWCPSCATVLANEQVVAGGCERCKTA----VERRELEQWFFRITAYADRLL 203 Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust. Identities = 39/190 (20%), Positives = 82/190 (43%), Gaps = 17/190 (8%) Query: 254 KFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISK 305 ++ P D ++ G + H +Y F L+ P + + G +L G K+SK Sbjct: 526 RWLPVDQYIGGVEHAILHLMYSRFFTKVLYDMGLVKVQEPF-TNLLTQGMVLKDGAKMSK 584 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365 S GNV+ P +++ G D R F++ +D + G++ V R Sbjct: 585 SKGNVVSPEDILNRYGADTTRLFVLFAAPPERDLEWSDQGVEG------CYRFLQRVWRL 638 Query: 366 VSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSE 423 V+ + + G P P A + S+ + + ++++ E+++ + + A++ + LV+ Sbjct: 639 VNSVADEIRGAAPVPSANLVGVNRSMRRLTHQTIKKVTEDIETRFNFNTAISAAMELVNG 698 Query: 424 VDRYFDAQKP 433 + + D P Sbjct: 699 MYHFRDRVAP 708 >gi|163734025|ref|ZP_02141466.1| valyl-tRNA synthetase [Roseobacter litoralis Och 149] gi|161392561|gb|EDQ16889.1| valyl-tRNA synthetase [Roseobacter litoralis Och 149] Length = 1038 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 21/237 (8%) Query: 254 KFWPADLHVIGKDILRFHAIYWPA------FLLSANLPLPKKVFSHGFIL-HKGEKISKS 306 K++P + G DI+ F W A + ++ P V+ H + KG+K+SKS Sbjct: 622 KYFPTSTLITGFDIIFF----WVARMMMMQYAVTGQKPF-STVYVHALVRDEKGKKMSKS 676 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVSR 364 LGNVIDP+++I+E G DA+R+ L A G+D + + L N Sbjct: 677 LGNVIDPLDMIDEFGADAVRFTLTAMAAMGRDLKLSTQRIAGYRNFGTKLWNACRFAEMN 736 Query: 365 SVSMILKDYDGMIPT---PGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 V +IPT P A E ++ I+ ++V QEI ++N + A + Sbjct: 737 EVFAQRAARTDVIPTQNRPPADVEQAVNKWIIGETAKVRQEIDAALENYRFNDAANAAYA 796 Query: 420 LV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 V D Y + KP +TN + A+ V+ Q ILL +P + +++ Sbjct: 797 FVWGKVCDWYVELSKPLLQDETNAEYAAETRATMAWVLDQCMILLHPVMPFITEELW 853 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 S I PN H+GHA+ + D+L R+HR+ G D L+ GTD G Sbjct: 40 SIMIPPPNVTGSLHMGHAFNNTLQDILIRWHRMRGFDTLWQPGTDHAG 87 >gi|295399400|ref|ZP_06809382.1| valyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|312110041|ref|YP_003988357.1| valyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] gi|294978866|gb|EFG54462.1| valyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|311215142|gb|ADP73746.1| valyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] Length = 880 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 42/230 (18%) Query: 204 LKDLSLSRKTFDWGIKIP------------------------DDPQYIMYVWIDALTNYL 239 ++D +SR+ + WG +IP DP ++ W + Sbjct: 403 IRDWCISRQLW-WGHRIPAWYHKETGEIYVDHEPPADIENWEQDPD-VLDTWFSSALWPF 460 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHG 294 +T G+ D +++P D+ V G DI+ F W + ++ L K V HG Sbjct: 461 STMGWPDTEAPDYQRYYPTDVLVTGYDIIFF----WVSRMIFQGLEFTGKRPFKDVLIHG 516 Query: 295 FILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 + +G K+SKSLGN +DP++VI++ G D+LR+FL + G+D + + ++ N Sbjct: 517 LVRDAQGRKMSKSLGNGVDPMDVIDQYGADSLRFFLATGSSPGQDLRFSTEKVEATWN-- 574 Query: 354 LANGIGNLVSRSVSMILK--DYDGMIPTPGAFTESDESILSVCSRVLQEI 401 AN I N SR M + YD + G T +D IL+ + ++ + Sbjct: 575 FANKIWN-ASRFALMNMGGMTYD-QLDLSGEKTVADHWILTRLNETIETV 622 Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 23/167 (13%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN + H+GHA++ + D++ R R+ G DVL+ G D G K+ + + Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLR 102 Query: 64 NAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 G++ T + ++ + + R L + D+ R T ++ R Sbjct: 103 KQGLSRYDLGREKFLEETWKWKEEYANHIRQQWAKLGLGL-DYTRERFTLDEGLSKAVRE 161 Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G Y W + A + + VYK G Y+ ++ Sbjct: 162 VFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVVYKEVKGALYHMRY 208 >gi|83589432|ref|YP_429441.1| leucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] gi|123725764|sp|Q2RKZ1|SYL_MOOTA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|83572346|gb|ABC18898.1| leucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] Length = 829 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 6/177 (3%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ K Y YP+ H+GH I DV+AR R+ G +VL G D G AA Sbjct: 31 DKPKFYCLEMFPYPSGNLHMGHVRNYSIGDVVARVKRMRGYNVLHPMGWDAFGLPAENAA 90 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G+ + N N R + ISY D + T ++ + L+ ++ G Y Sbjct: 91 IHRGIPPAEWTWSNIANMRRQLHAMGISYDWDREVATCHPNYYRWTQWLFLQMYKHGLAY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 + + + +++V GA + H PV + E +FFR++ Y D+LL Sbjct: 151 RKKAAVNWCPSCATVLANEQVVDGACERC----HTPVMRKDLEQWFFRITDYADRLL 203 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/194 (21%), Positives = 88/194 (45%), Gaps = 23/194 (11%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 + + + G +L G K+SKS GN++ P E+I G D R F++ +D + G++ Sbjct: 568 QNLLTQGMVLKDGSKMSKSKGNIVSPEEIINRYGADTARLFILFAAPPERDLEWSDQGVE 627 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF---TESDESILSVCSRVLQEIREN 404 G ++R ++ D + G+ + +D + + ++++ E+ Sbjct: 628 ---------GCYRFLNRVWRLVGSYADAVRRAGGSLEIRSHADRELWRLLHATIKKVTED 678 Query: 405 MQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463 ++ + + A++ ++ LV+ RY D T P+ L + EV+R+L LL Sbjct: 679 VEERFNFNTAISAIMELVNGCYRYQD---------TVPEEEQN-LVLMGEVLRKLVTLLA 728 Query: 464 AFVPKLANKIFDIL 477 F P + +++ L Sbjct: 729 PFAPHITEELWQGL 742 >gi|302560654|ref|ZP_07312996.1| valyl-tRNA synthetase [Streptomyces griseoflavus Tu4000] gi|302478272|gb|EFL41365.1| valyl-tRNA synthetase [Streptomyces griseoflavus Tu4000] Length = 874 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 7/178 (3%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284 ++ W + +T G+ + + S AKF+P + V G DIL F F L A Sbjct: 454 VLDTWFSSGLWPFSTLGWPEQTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 512 Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P + HG + + G+K+SKS GN ++P++ +++ G DALR+ L R G D + Sbjct: 513 PPFHTIALHGMVRDQFGKKMSKSFGNAVNPLDWMDKYGSDALRFTLARGANPGVDVPIGE 572 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 D ++ N AN I N +R M G +P A + +D ILS + V+ E+ Sbjct: 573 DWVQGSRN--FANKIWN-ATRFALMNGATVQGPLPDASAMSSTDRWILSRLNSVVAEV 627 >gi|229167050|ref|ZP_04294794.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH621] gi|228616403|gb|EEK73484.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH621] Length = 1033 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++ + G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE NP++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNPEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust. Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I D++AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRAIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWNILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|189083246|sp|A8FGG0|SYL_BACP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS Length = 804 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 11/197 (5%) Query: 2 KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +++ K Y YP+ A H+GH D+L+R R+ G DVL G D G + Sbjct: 28 EDKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQ 87 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118 A + G VF ++N NFR L SY D I TT+ ++ + ++ K+ +KG Sbjct: 88 YALDTGNDPAVFTEENINNFRRQIQSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGL 147 Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y W N++ + DG+ H PV+ + + +++AY D+LL Sbjct: 148 AYIDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLL 202 Query: 178 SYYE--SHPEFILPIER 192 E PE I ++R Sbjct: 203 EDLEDIDWPESIKDMQR 219 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 9/92 (9%) Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL 297 L +P+ K K+ P D+++ G + H +Y W FL + K K+F+ G IL Sbjct: 512 LASPEKLK-KWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFMKLFNQGMIL 570 Query: 298 -HKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 EK+SKS GNV++P +++E G D LR + Sbjct: 571 GENNEKMSKSKGNVVNPDDIVESHGADTLRLY 602 >gi|157693425|ref|YP_001487887.1| leucyl-tRNA synthetase [Bacillus pumilus SAFR-032] gi|157682183|gb|ABV63327.1| leucine--tRNA ligase [Bacillus pumilus SAFR-032] Length = 849 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 11/197 (5%) Query: 2 KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +++ K Y YP+ A H+GH D+L+R R+ G DVL G D G + Sbjct: 73 EDKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQ 132 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118 A + G VF ++N NFR L SY D I TT+ ++ + ++ K+ +KG Sbjct: 133 YALDTGNDPAVFTEENINNFRRQIQSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGL 192 Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y W N++ + DG+ H PV+ + + +++AY D+LL Sbjct: 193 AYIDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLL 247 Query: 178 SYYE--SHPEFILPIER 192 E PE I ++R Sbjct: 248 EDLEDIDWPESIKDMQR 264 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 9/92 (9%) Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL 297 L +P+ K K+ P D+++ G + H +Y W FL + K K+F+ G IL Sbjct: 557 LASPEKLK-KWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFMKLFNQGMIL 615 Query: 298 -HKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 EK+SKS GNV++P +++E G D LR + Sbjct: 616 GENNEKMSKSKGNVVNPDDIVESHGADTLRLY 647 >gi|309776468|ref|ZP_07671454.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] gi|308915859|gb|EFP61613.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] Length = 875 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/188 (32%), Positives = 91/188 (48%), Gaps = 17/188 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-----S 281 ++ W + +T G+ K +++P D+ V G DI+ F W A + Sbjct: 445 VLDTWFSSALWPFSTLGWPQETADLK-RYFPNDVLVTGYDIIFF----WVARMAFQTRYC 499 Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 N K V HG + +G K+SKSLGN IDP++VI E GVDALR+FL G+D Sbjct: 500 MNSRPFKDVLIHGLVRDAQGRKMSKSLGNGIDPMDVIAEHGVDALRFFLTTNSTPGQDLR 559 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES--DESILSVCSRVL 398 Y + K +A+ N I N SR V M + + D +P S D+ IL + VL Sbjct: 560 YIDE--KVAASANFINKIWN-ASRFVLMQIPE-DMEVPDIDLSNASMIDKWILKRFNEVL 615 Query: 399 QEIRENMQ 406 + + NM+ Sbjct: 616 ESVTANME 623 Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 11/59 (18%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRN 79 H+GHA++ + D+++R+ R+ G D+L+ G D +AG+ T+ VD+ +N Sbjct: 52 HLGHAWDTTLQDIVSRYKRMQGYDMLWLPGMD-----------HAGIATQAKVDERLKN 99 >gi|194334635|ref|YP_002016495.1| valyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] gi|194312453|gb|ACF46848.1| valyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] Length = 902 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 117/264 (44%), Gaps = 31/264 (11%) Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA------NL 284 W+ +T T G+ +N D F+P V G DI+ F W A ++ A ++ Sbjct: 466 WLWPMTTLGWTGGHQENDD--LKSFYPTSTLVTGPDIIFF----WVARMIMAGIYFNGDI 519 Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 P F+ KG K+SKSLGN DP++VI+ G DALR+ +V G+D + ++ Sbjct: 520 PFRDVYFTSIIRDMKGRKLSKSLGNSPDPLKVIDTYGTDALRFTIVYIAPLGQDVLFGEE 579 Query: 345 GLKKRVNADLANGIGN---LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 K + + A I N LV + D D AF+ SI +L Sbjct: 580 --KCELGRNFATKIWNATRLVFMQREKVFDDMDSFRHAYEAFSFDSLSIQGADRWILG-- 635 Query: 402 RENMQNQLIHRALAQ-----VISLVSE------VDRYFDAQKPWELKKTNPDRASTVLYV 450 R + + H A AQ ++ ++ + D Y +A K EL ++ D A+ + + Sbjct: 636 RYHRMLEAYHHAFAQFRLNDIVKIIYDFFRGDYCDWYLEALKV-ELAGSSHDEAADRVCL 694 Query: 451 TVEVIRQLAILLQAFVPKLANKIF 474 V ++ + +L +P L ++I+ Sbjct: 695 AVSILEGVLKVLHPVMPFLTDEIW 718 >gi|311107263|ref|YP_003980116.1| isoleucyl-tRNA synthetase [Achromobacter xylosoxidans A8] gi|310761952|gb|ADP17401.1| isoleucyl-tRNA synthetase [Achromobacter xylosoxidans A8] Length = 953 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 13/202 (6%) Query: 230 VWIDALTNYLTTTGYLDNP-DGSKAK--FWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 VW D+ + + T G D GS WPADL++ G D R FH+ +L Sbjct: 546 VWFDSGSTHATVLGGKDGDFAGSHGAELAWPADLYLEGSDQHRGWFHSSLLTGCMLYGQP 605 Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K + +HGF++ +G K+SKS+GNVI P +V + +G + LR ++ G+ D+ Sbjct: 606 PY-KALLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGELSISDE 664 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEI 401 + KRV + I N + R + L D+D + G E D L++ +++ E+ Sbjct: 665 --ILKRV-VEGYRRIRNTL-RFLLANLADFDAVTQAVPYGELFEIDRYALAMTAQMQAEV 720 Query: 402 RENMQNQLIHRALAQVISLVSE 423 + N + H A++++ + SE Sbjct: 721 QANYERYDFHPAVSRLQTFCSE 742 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 68/173 (39%), Gaps = 22/173 (12%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------ 55 + R + + Y N HIGHA I+ D++ + + G D + G D HG Sbjct: 45 RGRPRFVLHDGPPYANGDIHIGHAVNKILKDIIVKSRNMAGYDAHYVPGWDCHGMPIEIQ 104 Query: 56 --QKIAKAAQNAGVTTKVF------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 +K K A V +K +D+ ++F+ + VL ++ D R Sbjct: 105 IEKKYGKHLPVAEVQSKARAYALEQIDRQRKDFKRLG-VLGEWDRPYMTMNFSNEADEIR 163 Query: 108 ILWKKISDKGDIYKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 L +I DKG +++G C+ +L + D V D + A+H Sbjct: 164 AL-GRILDKGYVFRGLKPVNWCFDCGSALAEAEVEYADRVDPAVDVAFPFAEH 215 >gi|297160520|gb|ADI10232.1| valyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1] Length = 877 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 23/262 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284 ++ W + +T G+ ++ GS KF+P + V G DIL F F L A Sbjct: 457 VLDTWFSSGLWPFSTLGWPED-TGSLRKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 515 Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P + HG + + G+K+SKS GN ++P++ +++ G DA+R+ L R G D + Sbjct: 516 PPFHTIALHGMVRDQFGKKMSKSFGNAVNPLDWMDQYGSDAVRFTLARGANPGVDVPIGE 575 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR- 402 D ++ N AN I N +R M +G +P + +D ILS + V+ E+ Sbjct: 576 DWVQASRN--FANKIWN-ATRFALMNGATVEGELPAAERLSAADRWILSRLNTVVAEVDA 632 Query: 403 -------ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 + + L H A +V E+ + AQ + A V EV+ Sbjct: 633 YYEDYQFAKLSDVLYHFAWDEVFDWYVELSKTTFAQ--------GGEAADASRRVLGEVL 684 Query: 456 RQLAILLQAFVPKLANKIFDIL 477 + LL VP + K++ L Sbjct: 685 DVMLRLLHPVVPFVTEKLWTAL 706 >gi|302655666|ref|XP_003019618.1| hypothetical protein TRV_06336 [Trichophyton verrucosum HKI 0517] gi|291183353|gb|EFE38973.1| hypothetical protein TRV_06336 [Trichophyton verrucosum HKI 0517] Length = 600 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 113/516 (21%), Positives = 211/516 (40%), Gaps = 69/516 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + + I++A+ + N PH+G+ II G++ L+ GT E+G A Sbjct: 12 QRNILITSALPFVNNVPHLGN----IIGG--------RGINTLYVGGTGEYGTTTEAKAL 59 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123 T + D+ ++ + +IS+D F RTT + + ++ K+ G + + Sbjct: 60 AENCTPQELCDKYHAIHAEIYEWFNISFDIFGRTTTQLQTEITLDIFLKLEKNGFLEERM 119 Query: 124 YSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHNPV----QWMEE---------------- 162 + Y ++ D V + D Y NA+ + Q +E Sbjct: 120 TTQLYCEEHHSFLADRFVEGECPDCGYANARGDQCDLCGQLLESLQLRNPRCKIDGSTPV 179 Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI--SFVKSGLKDLSLSRKTFDW 216 + F L Q K+ ++++ VI S++K GLK S++R W Sbjct: 180 TRDTKHIFLELDKLQAKVENFFQDSTAN-GSWSNNGAVITASWLKEGLKPRSITRD-ISW 237 Query: 217 GIKIPDDPQY---IMYVWIDALTNYLTTTG-YLDNPDGSKAKFW--PADLHV---IGKDI 267 G ++P P Y ++Y W DA Y++ T Y D + ++W P D+ + IGKD Sbjct: 238 GTRVPL-PGYEDKVIYSWFDACIGYVSITARYTDQWE----RWWRSPKDVQLYQFIGKDN 292 Query: 268 LRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324 + FH++ +PA + + + + ++ ++G K SKS G V + D Sbjct: 293 VVFHSVIFPASQIGTEDTWTRLHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQKTGIPADI 352 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPT---- 379 R FL+ D + D N L +GN VSR + + + Y+ ++P Sbjct: 353 WRCFLLSHRPETGDSEFTWDAFINCNNNLLLKNLGNFVSRVLKFVNSRHYNNIVPNWTQY 412 Query: 380 -PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELK 437 G+F E I +R+L + + I A + V+ + + + + + L Sbjct: 413 LEGSFATFKEEI----NRLLAQYIRELDAVKIRSAWSTVLQISQQGNGFLQLNRLDNSLA 468 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + P + + V+ + + + LA L+ ++P AN I Sbjct: 469 ENEPSKCAAVIGIAINTVHLLASLVAPYMPDTANSI 504 >gi|194017807|ref|ZP_03056416.1| leucyl-tRNA synthetase [Bacillus pumilus ATCC 7061] gi|194010459|gb|EDW20032.1| leucyl-tRNA synthetase [Bacillus pumilus ATCC 7061] Length = 830 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 11/197 (5%) Query: 2 KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +++ K Y YP+ A H+GH D+L+R R+ G DVL G D G + Sbjct: 54 EDKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQ 113 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118 A + G VF ++N NFR L SY D I TT+ ++ + ++ K+ +KG Sbjct: 114 YALDTGNDPAVFTEENINNFRRQIQSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGL 173 Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y W N++ + DG+ H PV+ + + +++AY D+LL Sbjct: 174 AYIDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLL 228 Query: 178 SYYE--SHPEFILPIER 192 E PE I ++R Sbjct: 229 EDLEDIDWPESIKDMQR 245 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 9/92 (9%) Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL 297 L +P+ K K+ P D+++ G + H +Y W FL + K K+F+ G IL Sbjct: 538 LASPEKLK-KWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFMKLFNQGMIL 596 Query: 298 -HKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 EK+SKS GNV++P +++E G D LR + Sbjct: 597 GENNEKMSKSKGNVVNPDDIVESHGADTLRLY 628 >gi|77919014|ref|YP_356829.1| leucyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] gi|123729465|sp|Q3A4P8|SYL_PELCD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|77545097|gb|ABA88659.1| leucyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] Length = 851 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 21/200 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK Y+ YP+ + H+GH I DV+ARF RL G +VL G D G AA Sbjct: 32 REKYYLLEMFPYPSGRIHMGHVRNYSIGDVVARFKRLQGYNVLHPMGWDAFGMPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120 + +N N R + SY D + T ++ ++++ K+ +KG Y Sbjct: 92 QHKTHPGKWTYENIDNMRAQLKKMGFSYDWDREVATCHPEYYRWEQLIFLKMLEKGLAYK 151 Query: 121 KGCYSGWYS-----LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175 K + W S L +E ND G V+ E E +FF+++ Y + Sbjct: 152 KSSFVNWCSECQTVLANEQVENDACWRCG----------TVVEQKELEQWFFKITDYAQE 201 Query: 176 LL---SYYESHPEFILPIER 192 LL S PE +L ++R Sbjct: 202 LLDDTSKLSGWPEPVLTMQR 221 >gi|50914656|ref|YP_060628.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS10394] gi|81822714|sp|Q5XAW8|SYV_STRP6 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|50903730|gb|AAT87445.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS10394] Length = 882 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 ++ V HG I +G K+SKSLGN IDP++VIE+ G D+LR+FL A G+D Sbjct: 498 TERQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ + E S ++V Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEEAESNVAKVAAS 602 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ +Q I L + I+ V+E Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625 Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 88 ATQAKVEERLR 98 >gi|238809718|dbj|BAH69508.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 843 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 83/359 (23%), Positives = 158/359 (44%), Gaps = 57/359 (15%) Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208 Y + PV+ + +F ++ +L + +S +R VI + D + Sbjct: 353 YSERSNTPVETLVMPQWFVKMDKLAQDILDHLKSKDAVNFYPKRFVNVIKKWMENIHDWT 412 Query: 209 LSRKTFDWGIKIP----DDPQYIMYV-----WI---DALTNYLTTT----GYLDNPDGSK 252 +SR+ + WG +IP DD + W+ D L + ++ +L P + Sbjct: 413 ISRQLW-WGHRIPAWYKDDKVKVQIESPGEGWVQDEDVLDTWFSSGIAPFSFLGWPKKTT 471 Query: 253 --AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----KVFSHGFILHK-GEKIS 304 +++P L V G DI+ F W A + L K +V HG + + G+K+S Sbjct: 472 LLKRYYPTSLLVTGYDIIFF----WVARMYFFGLEFMKQKPFDRVLIHGLVRDQFGKKMS 527 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS N +DPI+VI E G DALR+F++ + G D Y K+ + L N + N ++R Sbjct: 528 KSSNNGVDPIQVINENGSDALRWFMITNTSPGLDIRYSKEKITSAWG--LCNKLWN-IAR 584 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN---QLIHRALAQVISLV 421 + ++ +D + T +D I + + + I + MQN ++ L++ I Sbjct: 585 YIQLLPEDKE------NKKTAADIWIHNKLVALKKRIDKAMQNYEFTIVGTELSKFI--- 635 Query: 422 SEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 ++ W EL K P++ + ++ ++ L ++ F+P + + ++ +LF Sbjct: 636 ------YNDFSSWYVELLKIMPNKKA-----ALDNLKSLLLIAHPFLPFITDHLYKVLF 683 Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/45 (35%), Positives = 22/45 (48%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 HIGHA + I D + R+ +L G DV + G D G +N Sbjct: 61 HIGHALDTYIQDTIIRYKKLSGYDVFYVAGMDHAGIATQSKVENT 105 >gi|260878357|ref|ZP_05890712.1| leucine--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|308090259|gb|EFO39954.1| leucine--tRNA ligase [Vibrio parahaemolyticus AN-5034] Length = 790 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 25/258 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++RF RL G +V+ G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N ++ +L YD +F T + ++ + + K+ +KG +Y Sbjct: 92 KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177 K S + D+ +++V DG + PV+ E +F +++ Y +L L Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206 Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231 E PE + ++R R+E + F G +DL + PD + YV Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEVYTTR-------PDTLMGVTYVG 259 Query: 232 IDALTNYLTTTGYLDNPD 249 I A + L T +NP+ Sbjct: 260 I-AAGHPLATLAAENNPE 276 >gi|239979443|ref|ZP_04701967.1| valyl-tRNA synthetase [Streptomyces albus J1074] gi|291451313|ref|ZP_06590703.1| valyl-tRNA synthetase [Streptomyces albus J1074] gi|291354262|gb|EFE81164.1| valyl-tRNA synthetase [Streptomyces albus J1074] Length = 873 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 32/225 (14%) Query: 204 LKDLSLSRKTFDWGIKIP---------------DDPQY---------IMYVWIDALTNYL 239 L+D +SR+ + WG +IP ++P ++ W + Sbjct: 407 LRDWCISRQLW-WGHRIPIWYGPDGEIVCVGPDEEPPGGEGWHQETDVLDTWFSSGLWPF 465 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFIL 297 +T G+ + D S AKF+P + V G DIL F F L A P + HG + Sbjct: 466 STLGWPEQTD-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGTPPFHTIALHGMVR 524 Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 + G+K+SKS GN ++P++ ++ G DALR+ L R G D +D ++ N AN Sbjct: 525 DQFGKKMSKSFGNAVNPLDWMDAYGSDALRFTLARGANPGVDVPIGEDWVQGSRN--FAN 582 Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 I N +R M +G +P + +D ILS + V+ E+ Sbjct: 583 KIWN-ATRFALMNGATVEGELPAAEELSATDRWILSRLNTVVAEV 626 >gi|323699457|ref|ZP_08111369.1| valyl-tRNA synthetase [Desulfovibrio sp. ND132] gi|323459389|gb|EGB15254.1| valyl-tRNA synthetase [Desulfovibrio desulfuricans ND132] Length = 888 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 58/316 (18%) Query: 204 LKDLSLSRKTFDWGIKIP--------------DDP--------------QYIMYVWIDAL 235 ++D +SR+ + WG +IP +DP + ++ W + Sbjct: 400 IRDWCISRQIW-WGHRIPAWTCEECGELIVAKEDPTVCPKCGSSRLVQDEDVLDTWFSSA 458 Query: 236 TNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293 +T G+ PD +K AK++P V G DIL F W A ++ L +V H Sbjct: 459 LWPFSTMGW---PDDTKELAKYYPTSCLVTGFDILFF----WVARMMMMGLQFMGEVPFH 511 Query: 294 GFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +H +G+K+SKS GNVIDP+++I + G DALR+ L A G+D + ++ Sbjct: 512 HVYIHALVRDEQGKKMSKSTGNVIDPLDMIGKYGADALRFTLTSFAAMGRDIKLSEQRIE 571 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-- 405 + N + N +R M L D +IP SD + + R L+E++E + Sbjct: 572 GYKH--FMNKVWN-ATRFAMMNLPD---VIPDADVHEASDLADRWILHR-LEEVKETVAS 624 Query: 406 -QNQLIHRALAQVIS--LVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461 N +AQ + + SE D Y + KP L + V V+ + IL Sbjct: 625 ATNDYRFNEIAQTLYKFIWSEFCDWYLEMIKP-ALYGEDERAKEATQRVLWTVLSETMIL 683 Query: 462 LQAFVPKLANKIFDIL 477 L P + +I+++L Sbjct: 684 LHPVTPFITQEIWNVL 699 Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 24/154 (15%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN H+GHA + + D+L RF+R G +VL+ GTD G + + + Sbjct: 41 SIVIPPPNVTGVLHMGHALNLTLQDILCRFNRQQGRNVLWVPGTDHAGIATQNVVERQLK 100 Query: 64 NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G+T K D R M +D + + F T +++ R Sbjct: 101 AEGLTRDDLGRDKFIERVWEWKKEKGDHILSQIRRMGASVDWTRECF--TFDEQRAKAVR 158 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 ++ + ++G IYKG Y + R DDEV Sbjct: 159 EVFVALYEQGLIYKGDYIINWCNRCHTALADDEV 192 >gi|229059882|ref|ZP_04197257.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH603] gi|228719427|gb|EEL71030.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH603] Length = 1033 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++ + G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTRK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE NP++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNPEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust. Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I D++AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRAIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWNILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|218245548|ref|YP_002370919.1| valyl-tRNA synthetase [Cyanothece sp. PCC 8801] gi|218166026|gb|ACK64763.1| valyl-tRNA synthetase [Cyanothece sp. PCC 8801] Length = 909 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 82/322 (25%), Positives = 142/322 (44%), Gaps = 41/322 (12%) Query: 184 PEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYVWIDALTNY 238 P + + E NE+ F+ + +D ++ + +G I + DP ++ W + Sbjct: 419 PAWYVISETNNEITDHTPFIVADNEDEAIKKAQEQYGENITLEQDPD-VLDTWFSSGLWP 477 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFI 296 +T G+ +N + +++P V G DI+ F + A + +P K V+ HG + Sbjct: 478 FSTLGWPENTE-DLTRYYPTSTLVTGFDIIFFWVARMTMMAGYFTDQIPF-KDVYIHGLV 535 Query: 297 L-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKD---GFYDKDGLKKRVN 351 G+K+SKS N IDP+ +I+ G DALRY L++E+A G+D + K + V Sbjct: 536 RDENGKKMSKSANNGIDPLILIKNYGTDALRYTLIKEVAGAGQDISLQYNRKTDESESVE 595 Query: 352 A--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR--------VLQEI 401 A + AN + N +R V M L+ TP D L +C R ++Q+ Sbjct: 596 ASRNFANKLWN-AARFVMMNLQGN-----TPKTLGVPDREKLELCDRWILSRFHQLVQQT 649 Query: 402 RENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDR----ASTVLYVTVEVI 455 R ++N + A + + D Y + K K +N + T+ YV + Sbjct: 650 RNYVENYGLGEAAKGLYEFIWGDFCDWYIELVKTRLWKDSNTESRLVAQQTLAYVLDNTL 709 Query: 456 RQLAILLQAFVPKLANKIFDIL 477 R LL F+P + +I+ L Sbjct: 710 R----LLHPFMPHITEEIWQTL 727 Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 S I PN H+GHA+E + DVL R+HR+ G + L GTD Sbjct: 43 SIVIPPPNVTGSLHMGHAFEDCLMDVLMRYHRMCGHNTLCLPGTD 87 >gi|239827910|ref|YP_002950534.1| valyl-tRNA synthetase [Geobacillus sp. WCH70] gi|239808203|gb|ACS25268.1| valyl-tRNA synthetase [Geobacillus sp. WCH70] Length = 880 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 42/230 (18%) Query: 204 LKDLSLSRKTFDWGIKIP------------------------DDPQYIMYVWIDALTNYL 239 ++D +SR+ + WG +IP DP ++ W + Sbjct: 403 IRDWCISRQLW-WGHRIPAWYHKETGEIYVDHEPPADIENWEQDPD-VLDTWFSSALWPF 460 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHG 294 +T G+ D +++P D+ V G DI+ F W + ++ L K V HG Sbjct: 461 STMGWPDTEAPDYKRYYPTDVLVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHG 516 Query: 295 FILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353 + +G K+SKSLGN +DP++VI++ G D+LR+FL + G+D + + ++ N Sbjct: 517 LVRDAQGRKMSKSLGNGVDPMDVIDQYGADSLRFFLATGSSPGQDLRFSTEKVEATWN-- 574 Query: 354 LANGIGNLVSRSVSMILK--DYDGMIPTPGAFTESDESILSVCSRVLQEI 401 AN I N SR M + YD + G T +D IL+ + ++ + Sbjct: 575 FANKIWN-ASRFALMNMGGMTYD-QLDLSGEKTVADHWILTRLNETIETV 622 Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust. Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 23/167 (13%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN + H+GHA++ + D++ R R+ G DVL+ G D G K+ + + Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLR 102 Query: 64 NAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 G++ T + ++ + + R L + D+ R T ++ R Sbjct: 103 KQGLSRYDLGREKFLEETWKWKEEYASHIRQQWAKLGLGL-DYTRERFTLDEGLSKAVRE 161 Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G Y W + A + + +YK G Y+ ++ Sbjct: 162 VFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVIYKEVKGALYHMRY 208 >gi|262039366|ref|ZP_06012679.1| valine--tRNA ligase [Leptotrichia goodfellowii F0264] gi|261746628|gb|EEY34154.1| valine--tRNA ligase [Leptotrichia goodfellowii F0264] Length = 883 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 23/279 (8%) Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDI 267 +RK F + + ++ ++ W + +T G+ P+ +K KF+P D V G DI Sbjct: 437 ARKKFGKDVDLREETD-VLDTWFSSALWPFSTMGW---PEKTKDLEKFFPTDTLVTGADI 492 Query: 268 LRFHAIYWPAFLLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVG 321 L F W A ++ +L + + V+ HG I + G K+SKSLGN DP+ +I++ G Sbjct: 493 LFF----WVARMIMMSLYIMDEIPFNYVYLHGLIRDEIGRKMSKSLGNSPDPLNLIDKYG 548 Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TP 380 DA+RY + + G+D + + ++ + + AN I N VS+ V L+D++ T Sbjct: 549 ADAIRYSFLYNTSQGQDIHFSEKLME--MGSTFANKIWN-VSKFVLSNLEDFNTETSVTD 605 Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438 F D ILS +I E M + A V D Y + K Sbjct: 606 LEFKLEDTWILSKLQSAAAKINEYMNGYELDNAAKAVYEFFRGEFCDWYVEIAKTRVYGG 665 Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D+ T +V V+ +L F+P + +I+ L Sbjct: 666 EGTDKV-TAQWVLRHVLDSGLKMLHPFMPFITEEIWQKL 703 Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 24/159 (15%) Query: 5 EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58 EK S I PN H+GH + I D + R+ R+ G D L+ GTD G K+ Sbjct: 35 EKPGYSIVIPPPNVTGILHMGHMLDNAIQDTIIRYKRMSGFDTLWVPGTDHAGIATQNKV 94 Query: 59 AKAAQNAGVTTKVFVDQN----------------SRNFRDMADVLDISYDDFIRTTEKRH 102 + ++ G + + + ++ R + LD S + F T ++ Sbjct: 95 ERMLKDEGTSKEEIGREEFLKRTWEWKEKHGGLITKQLRRLGVSLDWSRERF--TMDEGL 152 Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 + ++ K+ + G IY+G Y + D+ DDEV Sbjct: 153 SKAVKEVFIKLYNDGLIYRGEYIVNWCPHDKTALADDEV 191 >gi|288930565|ref|YP_003434625.1| valyl-tRNA synthetase [Ferroglobus placidus DSM 10642] gi|288892813|gb|ADC64350.1| valyl-tRNA synthetase [Ferroglobus placidus DSM 10642] Length = 864 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 13/256 (5%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284 ++ W+D+ L G+ + + K +P L G DI+R A Y + L + Sbjct: 444 VLDTWMDSSITPLAIVGWPE-----ELKEYPTHLRPQGHDIIRTWAFYTILRSIYLVNQI 498 Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 P + V + + G K+SKSLGN ++ EVIE+ G D LR + G D + Sbjct: 499 PWYEIVINGMVLGEDGRKMSKSLGNYVEAEEVIEKYGADCLRQWAAIGGVVGSDVAFSWK 558 Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404 +K +A ++R +M L++Y+ ++D ILS +++++E+ E Sbjct: 559 EIK---SASRFQQKFWSLTRFSAMHLENYEPKDEHEQYLRDADRWILSKLNKLVKEVDEA 615 Query: 405 MQNQLIHRALAQV--ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462 M+N AL + + D Y + K L + Y +V+ L LL Sbjct: 616 MENYSFSEALKLIRGFTWYEFADNYVELVKN-RLYSGDEKEKLAARYTLYKVMNALIRLL 674 Query: 463 QAFVPKLANKIFDILF 478 F P L+ + +++LF Sbjct: 675 APFTPFLSEECWNVLF 690 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 15/129 (11%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGV 67 I T YP HIG+A D +AR+ R+ G +V+F G D HG K + G+ Sbjct: 36 IDTPPPYPTGSFHIGNALNWCYIDFIARYKRMKGYEVMFPQGWDCHGLPTEVKVEELYGI 95 Query: 68 TT---------KVFVDQNSRNFRDMADV-----LDISYDDFIRTTEKRHHDTCRILWKKI 113 ++ V+ RN + M + L I + T ++ ++ + ++ Sbjct: 96 KKNDVPREKFRELCVEFTERNIKRMKETMKKLGLSIDWSKEYVTMYPEYYRKTQVSFVRL 155 Query: 114 SDKGDIYKG 122 +KG IYKG Sbjct: 156 YEKGWIYKG 164 >gi|162456513|ref|YP_001618880.1| hypothetical protein sce8230 [Sorangium cellulosum 'So ce 56'] gi|161167095|emb|CAN98400.1| metS [Sorangium cellulosum 'So ce 56'] Length = 641 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 78/316 (24%), Positives = 132/316 (41%), Gaps = 30/316 (9%) Query: 216 WGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSK----AKFW--PAD--LHVIG 264 WGI I +DP +YVW D+L ++ + G A FW P + +G Sbjct: 325 WGIPITEDPDLAGKTLYVWPDSLIAPISFSKVALRDKGVDPARYADFWRDPEARVVQFLG 384 Query: 265 KDILRFHAIYWPAFLLSAN-----LPLPKK-----VFSHGFILHKGEKISKSLGNVIDPI 314 +D + F+ + A L LP + VF +L GEK+SKS GN Sbjct: 385 QDNVYFYVLMQGAMWLGTQEDPRRLPAAGELQLTDVFGCFHLLVGGEKMSKSRGNFFTGD 444 Query: 315 EVIEEVG--VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 ++++E G VD +RY+L K +D + L +R N LA + R +S + Sbjct: 445 QLLDEKGYSVDQIRYYLALLSLAEKPSDFDFEKLDER-NKFLAGPMNAAFERPISAVHSK 503 Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432 + G +P GA + +++ R++Q M L ++ + ++ F K Sbjct: 504 FGGKVPE-GALL---DKVVADTVRIVQRYVRAMDRADYPNLLFEIENYARTINSLFTQYK 559 Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492 P + + R LY + V++ L I+L FVP+ +++ L + E + L Sbjct: 560 PHDDRHPEQGR-RDALYTSFYVLKTLMIMLYPFVPETMDRLRASLRLPPEVFRLEELGTP 618 Query: 493 LKPGFMLHKTFDPIFP 508 + G + P FP Sbjct: 619 IPAGHEIGAK-QPYFP 633 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 3/102 (2%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQK 57 ++ +++ ++ + Y N H+GH A + AD+ AR+ R+ +VL+ GTDEHG Sbjct: 18 LRRPKRMVVTAGMPYANGPLHLGHLAGAQLPADIYARWCRMLIGAENVLYVCGTDEHGST 77 Query: 58 IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99 AA AG+ + ++D+ + + + IS D F T++ Sbjct: 78 SEIAAVQAGLPIREYIDRIQQAQKKTLERYCISLDAFTGTSQ 119 >gi|52081521|ref|YP_080312.1| leucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52786900|ref|YP_092729.1| leucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|319647431|ref|ZP_08001652.1| leucyl-tRNA synthetase [Bacillus sp. BT1B_CT2] gi|60390680|sp|Q65FX8|SYL_BACLD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|52004732|gb|AAU24674.1| leucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52349402|gb|AAU42036.1| LeuS [Bacillus licheniformis ATCC 14580] gi|317390477|gb|EFV71283.1| leucyl-tRNA synthetase [Bacillus sp. BT1B_CT2] Length = 804 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 11/197 (5%) Query: 2 KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + K Y YP+ A H+GH D+L+R R+ G +VL G D G + Sbjct: 28 KSKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118 A + G VF +QN NFR L SY D + TT+ ++ + ++ K+ +KG Sbjct: 88 YALDTGNDPAVFTEQNIDNFRRQIRALGFSYDWDREVNTTDPDYYKWTQWIFLKLYEKGL 147 Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y W N++ + DG+ H PV+ + + +++AY D+LL Sbjct: 148 AYVDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLL 202 Query: 178 SYYES--HPEFILPIER 192 E PE I ++R Sbjct: 203 EDLEELDWPESIKEMQR 219 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 11/88 (12%) Query: 251 SKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLP-----KKVFSHGFIL-HKG 300 K K W P D+++ G + H +Y W FL + +P K++++ G IL Sbjct: 516 EKLKEWLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGV-VPTKEPFKQLYNQGMILGENN 574 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYF 328 EK+SKS GNV++P E++E G D LR + Sbjct: 575 EKMSKSKGNVVNPDEIVETHGADTLRLY 602 >gi|322383210|ref|ZP_08057021.1| valyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152479|gb|EFX45265.1| valyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 906 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 14/154 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + D K +++P ++ V G DI+ F W A ++ ++L Sbjct: 475 VLDTWFSSALWPFSTLGWPEQTDDLK-RYFPTNVLVTGYDIIYF----WVARMIFSSLEF 529 Query: 287 P-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K V HG + +G K+SKSLGN IDP+EVI++ G DA+RY L G+D Sbjct: 530 TGQIPFKDVLVHGLVRDAEGRKMSKSLGNGIDPLEVIKQYGADAMRYMLSTSSTPGQDLR 589 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374 + + +++ N AN I N SR M L+ ++ Sbjct: 590 FRWERVEQARN--FANKIWN-ASRFALMNLEGFN 620 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 23/173 (13%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58 ERE I HIGHA + + D++ R R+ G D L+ G+D G K+ Sbjct: 60 EREPYMIVIPPPNVTGMLHIGHALDFTLQDIIIRAKRMQGYDALWLPGSDHAGIATQTKV 119 Query: 59 AKAAQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102 + + GV+ +++ + M LD S + F T ++ Sbjct: 120 EQKLREEGVSRYDLGREAFLEKVWDWKELYAGTIREQWGKMGLSLDFSRERF--TLDEGL 177 Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 R ++ K+ DKG IY+G Y + +D EV YK G Y+ ++ Sbjct: 178 SKAVRKVFVKLYDKGLIYRGKYIINWDPAARTALSDIEVEYKEIQGNLYHLEY 230 >gi|308069864|ref|YP_003871469.1| Isoleucyl-tRNA synthetase, mupirocin resistant (Isoleucine--tRNA ligase) [Paenibacillus polymyxa E681] gi|305859143|gb|ADM70931.1| Isoleucyl-tRNA synthetase, mupirocin resistant (Isoleucine--tRNA ligase) [Paenibacillus polymyxa E681] Length = 1029 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 73/267 (27%), Positives = 121/267 (45%), Gaps = 34/267 (12%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + +L+ Sbjct: 512 VIDVWFDSGSMPFAQHHYPFENNETFEQQF-PADMICEGIDQTRGWFYSLLAVSTMLTGK 570 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 P K V + G +L +G+K+SKS GNVIDP EVI+E G DA R+ L+ + A + Sbjct: 571 APY-KAVMATGHVLDEQGQKMSKSKGNVIDPWEVIDEYGTDAFRWALLSDSAPWNSKRFS 629 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVL 398 K G+ + L + + N + + + D DG P F S D ILS Sbjct: 630 K-GIVGEAKSKLVDTLVN--THAFLTLYADIDGFDPAQHPFKPSAHKLDRWILS------ 680 Query: 399 QEIRENMQNQLIHRALA--QVISLVSEVDRYFDAQKPWELKKT---------NPDRASTV 447 R N ++ +ALA ++ ++ + D W ++++ D+ Sbjct: 681 ---RLNSLILVVDKALAVNDFLNSSKAIESFVDELSNWYIRRSRDRFWGNGLTEDKLDAY 737 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIF 474 +T EV+ A LL F P LA I+ Sbjct: 738 RTLT-EVLLTTAKLLAPFTPLLAEDIY 763 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N +PHIGH +I D + R+ + G V+ G D HG + Q G++ K +++ Sbjct: 50 NGKPHIGHVLGRVIKDFVGRYQTMKGYRVVRKAGWDTHGLPVELGVQKQLGISHKPEIEE 109 >gi|227488335|ref|ZP_03918651.1| valyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867] gi|227091697|gb|EEI27009.1| valyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867] Length = 886 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 75/312 (24%), Positives = 128/312 (41%), Gaps = 62/312 (19%) Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240 + D ++SR+ + WG +IP DP ++ W + + Sbjct: 418 MHDWTISRQLW-WGHRIPIWYGPNDEVVCCGPDDTPPEGYTQDPD-VLDTWFSSALFPFS 475 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS------------ANLPLPK 288 T G+ D+ D K KF+P + V DIL +W A ++ +P Sbjct: 476 TMGWPDSTDDLK-KFYPTSVLVTAYDIL----FFWVARMMMFGTYAGQMTEGLGEVPF-T 529 Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +F HG + +G K+SKSLGN I+P++ +E+ G DALR+ L R G D D Sbjct: 530 DLFLHGLVRDERGRKMSKSLGNGINPMDWVEDYGADALRFALARGANPGVDLPLGSDA-- 587 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 + N + L + + + + D P +++D IL + V +++ E + + Sbjct: 588 ---GSSARNFVTKLFNAARFALSRGADASAELPAELSDADRWILDRLNEVTRDVNELLDD 644 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465 +A ++ V +D W EL KTN A V V+ Q+ LL Sbjct: 645 YQFAKANEEMFHFV------WDELCDWYLELSKTNFQPA-----VMGHVLDQVLRLLHPT 693 Query: 466 VPKLANKIFDIL 477 +P + ++ L Sbjct: 694 MPFVTETLWTAL 705 >gi|157962960|ref|YP_001502994.1| leucyl-tRNA synthetase [Shewanella pealeana ATCC 700345] gi|157847960|gb|ABV88459.1| leucyl-tRNA synthetase [Shewanella pealeana ATCC 700345] Length = 868 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 111/256 (43%), Gaps = 18/256 (7%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + +EK Y + YP+ + H+GH I DV++R+ RL G +VL G D G A Sbjct: 39 ENKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVLQPIGWDSFGLPAENA 98 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A + +N ++ +L YD I T ++ + + K+ +KG + Sbjct: 99 AIKNNTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLV 158 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178 YK S + DE +++V DG + V+ E +F +++ Y ++LL+ Sbjct: 159 YKKTSSVNWCPNDETVLANEQVI---DGCCWRCD-TTVEQKEIPQWFIKITEYAEELLND 214 Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 E PE + ++R R+E I ++ S ++FD PD + YV I Sbjct: 215 IDTLEEWPEQVKTMQRNWIGRSEGIEMTFQ----VAGSDQSFDIYTTRPDTVMGVTYVAI 270 Query: 233 DALTNYLTTTGYLDNP 248 A + L ++NP Sbjct: 271 -AAGHPLAEQAAINNP 285 >gi|189083234|sp|A8H7C2|SYL_SHEPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS Length = 859 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 111/256 (43%), Gaps = 18/256 (7%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + +EK Y + YP+ + H+GH I DV++R+ RL G +VL G D G A Sbjct: 30 ENKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVLQPIGWDSFGLPAENA 89 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A + +N ++ +L YD I T ++ + + K+ +KG + Sbjct: 90 AIKNNTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLV 149 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178 YK S + DE +++V DG + V+ E +F +++ Y ++LL+ Sbjct: 150 YKKTSSVNWCPNDETVLANEQVI---DGCCWRCD-TTVEQKEIPQWFIKITEYAEELLND 205 Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 E PE + ++R R+E I ++ S ++FD PD + YV I Sbjct: 206 IDTLEEWPEQVKTMQRNWIGRSEGIEMTFQ----VAGSDQSFDIYTTRPDTVMGVTYVAI 261 Query: 233 DALTNYLTTTGYLDNP 248 A + L ++NP Sbjct: 262 -AAGHPLAEQAAINNP 276 >gi|119510813|ref|ZP_01629939.1| valyl-tRNA synthetase [Nodularia spumigena CCY9414] gi|119464576|gb|EAW45487.1| valyl-tRNA synthetase [Nodularia spumigena CCY9414] Length = 1010 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 127/294 (43%), Gaps = 24/294 (8%) Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPA 258 KS + ++ F +K+ DP ++ W + +T G+ + PD ++P Sbjct: 440 AKSADEAWEKAKSQFGADVKLEQDPD-VLDTWFSSGLWPFSTLGWPEQTPD--LETYYPN 496 Query: 259 DLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 V G DI+ F W A + + +P V+ HG +L G+K+SK+ GN I Sbjct: 497 STLVTGFDIIFF----WVARMTMMGGHFTGKMPF-NDVYIHGLVLDENGQKMSKTKGNGI 551 Query: 312 DPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMI 369 DP+ +I++ G DALRY L++E+A G++ + D K + + + + N + + + Sbjct: 552 DPLLLIDKYGTDALRYTLIKEVAGAGQNIRLEYDRKKDESASVEASRNFANKLWNAARFV 611 Query: 370 LKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423 + + DG P P SD ILS +V+ + + N + A + + Sbjct: 612 MMNLDGQTPAQLGEPIPTELSDTWILSRYHQVINQTSNYIDNYGLGEAAKGLYEFIWGDF 671 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D Y + K K +P + V+ + LL +P + +I+ L Sbjct: 672 CDWYIELVKSRLQKDADPASRKVAQQILGYVLEGILKLLHPLMPHITEEIWQTL 725 Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust. Identities = 15/32 (46%), Positives = 22/32 (68%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 H+GHA+E + D L R+HR+ G + L+ GTD Sbjct: 56 HMGHAFESALIDTLIRYHRMKGRNTLWVPGTD 87 >gi|319776933|ref|YP_004136584.1| valyl-tRNA synthetase [Mycoplasma fermentans M64] gi|318038008|gb|ADV34207.1| Valyl-tRNA synthetase [Mycoplasma fermentans M64] Length = 832 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 83/359 (23%), Positives = 158/359 (44%), Gaps = 57/359 (15%) Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208 Y + PV+ + +F ++ +L + +S +R VI + D + Sbjct: 342 YSERSNTPVETLVMPQWFVKMDKLAQDILDHLKSKDAVNFYPKRFVNVIKKWMENIHDWT 401 Query: 209 LSRKTFDWGIKIP----DDPQYIMYV-----WI---DALTNYLTTT----GYLDNPDGSK 252 +SR+ + WG +IP DD + W+ D L + ++ +L P + Sbjct: 402 ISRQLW-WGHRIPAWYKDDKVKVQIESPGEGWVQDEDVLDTWFSSGIAPFSFLGWPKKTT 460 Query: 253 --AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----KVFSHGFILHK-GEKIS 304 +++P L V G DI+ F W A + L K +V HG + + G+K+S Sbjct: 461 LLKRYYPTSLLVTGYDIIFF----WVARMYFFGLEFMKQKPFDRVLIHGLVRDQFGKKMS 516 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS N +DPI+VI E G DALR+F++ + G D Y K+ + L N + N ++R Sbjct: 517 KSSNNGVDPIQVINENGSDALRWFMITNTSPGLDIRYSKEKITSAWG--LCNKLWN-IAR 573 Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN---QLIHRALAQVISLV 421 + ++ +D + T +D I + + + I + MQN ++ L++ I Sbjct: 574 YIQLLPEDKE------NKKTAADIWIHNKLVALKKRIDKAMQNYEFTIVGTELSKFI--- 624 Query: 422 SEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 ++ W EL K P++ + ++ ++ L ++ F+P + + ++ +LF Sbjct: 625 ------YNDFSSWYVELLKIMPNKKA-----ALDNLKSLLLIAHPFLPFITDHLYKVLF 672 Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/45 (35%), Positives = 22/45 (48%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 HIGHA + I D + R+ +L G DV + G D G +N Sbjct: 50 HIGHALDTYIQDTIIRYKKLSGYDVFYVAGMDHAGIATQSKVENT 94 >gi|260892906|ref|YP_003239003.1| isoleucyl-tRNA synthetase [Ammonifex degensii KC4] gi|260865047|gb|ACX52153.1| isoleucyl-tRNA synthetase [Ammonifex degensii KC4] Length = 916 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 7/107 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 IM VW D+ +++ L P + WPADL++ G D R F++ A ++ Sbjct: 524 IMDVWFDSGSSHWAV---LRQPSPWPDQHWPADLYLEGSDQHRGWFNSSLSTAVAITGQP 580 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 P + V +HGF++ +G K+SKSLGNV+DP EV+ ++G D LR ++ Sbjct: 581 PY-RAVLTHGFVVDEEGRKMSKSLGNVVDPQEVMTKLGADILRLWVC 626 Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust. Identities = 15/57 (26%), Positives = 26/57 (45%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 R K + Y N H+GH ++ D++ ++ + G D + G D HG I + Sbjct: 47 RPKFILHDGPPYANGHIHLGHVLNKVLKDIIIKYRSMSGYDAPYIPGWDTHGLPIEQ 103 >gi|314933819|ref|ZP_07841184.1| valine--tRNA ligase [Staphylococcus caprae C87] gi|313653969|gb|EFS17726.1| valine--tRNA ligase [Staphylococcus caprae C87] Length = 876 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 13/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDTESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +++ I G + +D+ IL+ + ++ Sbjct: 559 YSTEKVESVWN--FINKIWNAARFSLMNIGEEFKVEDIDLSGNLSLADKWILTRLNETIK 616 Query: 400 EI 401 + Sbjct: 617 TV 618 Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G IA Sbjct: 30 EDKSKDTYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAG--IA 87 Query: 60 KAAQ 63 A+ Sbjct: 88 TQAK 91 >gi|33864455|ref|NP_896015.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313] gi|33641235|emb|CAE22365.1| t-RNA synthetase, class Ia:Valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313] Length = 947 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 120/289 (41%), Gaps = 32/289 (11%) Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269 +R F + I D + ++ W + +T G+ D ++P V G DI+ Sbjct: 482 ARDQFGEAVVIQQD-EDVLDTWFSSGLWPFSTMGWPDQESADLECWYPTSTLVTGFDIIF 540 Query: 270 FHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALR 326 F + A + +P V+ HG + + K+SKS GN IDP+ +IE G DALR Sbjct: 541 FWVARMTMMAGAFTGRMPF-ADVYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALR 599 Query: 327 YFLVREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 + LVRE+A G+D D D + A N + + L + G TP + Sbjct: 600 FALVREVAGAGQDIRLDYDRKSDTSATVEAARNFANKLWNATRFALMNLGG--ETPASLG 657 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHR----ALAQVISLVSE------VDRYFDAQKPW 434 E D + L + R + M ++ R L + + E D Y + K Sbjct: 658 EPDPASLQLADRWILSRLARMNRDVVERYDSYRLGEAAKCLYEFAWNDICDWYLELSK-- 715 Query: 435 ELKKTNP--DRASTVL-------YVTVEVIRQLAILLQAFVPKLANKIF 474 ++ +P D + VL V +V+ L ++L +P L+ +++ Sbjct: 716 --RRLHPGEDASGEVLADQCTARQVLAKVLADLLVMLHPLMPHLSEELW 762 Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 S I PN H+GHA+ + D + RF RL G +VL GTD Sbjct: 71 SVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGKNVLCLPGTD 115 >gi|150390081|ref|YP_001320130.1| leucyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] gi|229559881|sp|A6TQK3|SYL_ALKMQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|149949943|gb|ABR48471.1| leucyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] Length = 824 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 10/180 (5%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++R K Y+ YP+ + H+GH I DV+ARF R+ G +VL G D G A Sbjct: 28 RDRPKYYVLEMFPYPSGKIHMGHVRNYSIGDVVARFKRMKGYNVLHPMGWDSFGLPAENA 87 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119 A G+ + +N + ++ D L +SY D + T ++ + L+ + KG Sbjct: 88 AIKHGIHPDHWTKENVKEMKEQLDALGLSYDWDREVSTCTPEYYKWTQWLFLQFYHKGLA 147 Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 YK W + N+ V G D + N QW +F+++ Y + LL Sbjct: 148 YKKESQVNWCPSCETVLANEQVVNGGCDRCDSSVGKKNLNQW------YFKITDYAEALL 201 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/239 (23%), Positives = 111/239 (46%), Gaps = 27/239 (11%) Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKIS 304 A +W P D ++ G + H +Y F L + P P KK+ + G +L G K+S Sbjct: 523 ANYWVPVDQYIGGVEHAILHLLYSRFFTKVMKDLGLTDQPEPFKKLLTQGMVLKDGAKMS 582 Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364 KS GNV+ P E+I++ G D R F++ +D + G++ N V R Sbjct: 583 KSKGNVVSPEEIIQKYGADTARLFVLFAAPPERDLEWSDQGVEGSYR------FLNRVWR 636 Query: 365 SVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVS 422 + + M + G A T+ D+ + ++++ +++++ + A++ V+ L++ Sbjct: 637 LAEEFIDNNLFMSTSLGEALTKRDKDLKYTIHYTIKKVTSDVEDRFNFNTAISAVMELIN 696 Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 E+ +Y K+T+P + + L+ E I +LL F P ++++ L A+ Sbjct: 697 ELYKY---------KETDPSKLNGDLF--REGIETSILLLAPFAPHFTEELWEKLGKAE 744 >gi|33241293|ref|NP_876235.1| valyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|81663879|sp|Q7V9I9|SYV_PROMA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|33238823|gb|AAQ00888.1| Valyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 933 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 84/383 (21%), Positives = 154/383 (40%), Gaps = 71/383 (18%) Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 P++ + +F R+ ++ S+ P +R +V +G++D +SR+ + Sbjct: 369 PIEPLLSTQWFVRMEPMAERCRSHLGKDEPRFYP-DRWAKVYRDWLTGIRDWCISRQLW- 426 Query: 216 WGIKIP-------------DDPQYIMYV----------------------------WIDA 234 WG +IP DD YI+ + W + Sbjct: 427 WGHRIPAWFVVSETNNELTDDTPYIVALSEKDALLEAQKKYGTDAVLRQDEDVLDTWFSS 486 Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFS 292 +T G+ D + ++++P + V G DI+ F + A + +P V+ Sbjct: 487 GLWPFSTLGWPDKTNADLSRWYPTNTLVTGFDIIFFWVARMTMMAGAFTGKMPF-ADVYI 545 Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLK-KR 349 HG + + K+SKS GN IDP+ +I+ G DALR+ LV+E+A G+D D D K Sbjct: 546 HGLVRDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVKEVAGAGQDIRIDYDRAKDTS 605 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--------SDESILSVCSRVLQEI 401 + A N + + L + G F E SD+ ILS S+V E Sbjct: 606 ATVEAARNFANKLWNATRFALINL-GDTTFKETFDELEHNRLELSDQWILSKLSKVNNET 664 Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFD--------AQKPWELKKTNPDRASTVLYVT 451 + + + A + D Y + + P E +N ++ V++ Sbjct: 665 AKRYKKYALGEAAKGLYEFAWNDFCDWYLELIKRRLNLGESPSEADLSNRKKSQIVMF-- 722 Query: 452 VEVIRQLAILLQAFVPKLANKIF 474 +V+R+L +++ +P L +++ Sbjct: 723 -KVLRELLVMMHPLMPHLTEELW 744 Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 S I PN H+GHA+ + D + RF RL G +VL GTD Sbjct: 52 SVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGKNVLCLPGTD 96 >gi|304407500|ref|ZP_07389152.1| valyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] gi|304343451|gb|EFM09293.1| valyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] Length = 886 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 7/148 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +F+P DL V G DI+ F + + A + + Sbjct: 454 VLDTWFSSALWPFSTLGWPDEDHEDFKRFYPTDLLVTGYDIIYFWVARMIFTALEFTDQI 513 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K V HG + +K+SKSLGN IDP++VIE+ G DA+R+ L G+D + Sbjct: 514 PF-KDVLMHGLVRDENNQKMSKSLGNGIDPLDVIEKYGADAMRFMLSTNNTPGQDLRFRW 572 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILK 371 + +++ N AN I N SR M L+ Sbjct: 573 EKVEQARN--FANKIWN-ASRFALMNLE 597 Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 23/155 (14%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-------- 68 HIGHA + + D++ R R+ G D L+ G+D G K+ + + G++ Sbjct: 58 HIGHALDFTLQDIMTRTKRMQGFDALWLPGSDHAGIATQTKVEQKLREQGLSRYDLGREK 117 Query: 69 --TKVFVDQNSRN------FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 KV+ + + N + M LD S + F T ++ R ++ K+ +KG IY Sbjct: 118 FLEKVWEWKETYNNTIREQWAKMGFGLDYSRERF--TLDEGLSRAVRQVFVKLYEKGLIY 175 Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 +G W A + + YK +G Y+ Q+ Sbjct: 176 RGKKIINWDPAARTALSDIEVEYKEVNGNLYHLQY 210 >gi|295706762|ref|YP_003599837.1| valyl-tRNA synthetase [Bacillus megaterium DSM 319] gi|294804421|gb|ADF41487.1| valyl-tRNA synthetase [Bacillus megaterium DSM 319] Length = 880 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 44/270 (16%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK + + + +R + ++D +SR+ + WG +IP Sbjct: 364 WFVKMQPLADKAVDLQKQEEKVNFVPDRFEKTYLHWMENIRDWCISRQLW-WGHRIPAWY 422 Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 + ++ W + +T G+ D +++P ++ Sbjct: 423 HKETGEVYVDHETPADIENWEQDSDVLDTWFSSALWPFSTMGWPDVDAADFKRYYPTNVL 482 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNVIDPIE 315 V G DI+ F W + ++ L K V HG + +G K+SKSLGN +DP+E Sbjct: 483 VTGYDIIFF----WVSRMIFQGLEFTGKRPFDDVLIHGLVRDAEGRKMSKSLGNGVDPME 538 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 VIE+ G D+LRYFL + G+D + + ++ N AN I N + L + DG Sbjct: 539 VIEKYGADSLRYFLSTGSSPGQDLRFSFEKVEATWN--FANKIWN----ASRFALMNMDG 592 Query: 376 M----IPTPGAFTESDESILSVCSRVLQEI 401 + + G + +D+ IL+ + ++ + Sbjct: 593 ITFEELDLSGGKSVADKWILTRLNETIEHV 622 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 67/171 (39%), Gaps = 21/171 (12%) Query: 5 EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-QKIAKA 61 EK + I PN + H+GHA++ + D+L R R+ G DVL+ G D G AK Sbjct: 38 EKEPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYDVLWLPGMDHAGIATQAKV 97 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 + K D NF Y FIR T ++ Sbjct: 98 EEKLRSEGKSRYDLGRENFVAETWKWKEEYASFIRQQWSKLGLGLDYSRERFTLDEGLSK 157 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 R ++ + KG IY+G Y W A + + +YK G +Y+ ++ Sbjct: 158 AVREVFVTLYKKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHMRY 208 >gi|152983469|ref|YP_001346507.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa PA7] gi|166231631|sp|A6V0C2|SYL_PSEA7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|150958627|gb|ABR80652.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa PA7] Length = 873 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 + ++EK Y + YP+ + H+GH I DV++R+HR+ G +VL G D G Sbjct: 29 LPDKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQGRNVLQPMGWDAFGMPAEN 88 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118 AA V + N + D L ++ D + T + ++ + L+ ++ +KG Sbjct: 89 AAMKNNVAPAAWTYDNIAYMKSQLDSLGLAIDWTREVTTCKPDYYRWEQWLFTRLFEKGV 148 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175 IY+ + + D+ +++V G G + P+ Y+F+++AY ++ Sbjct: 149 IYRKNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYAEE 201 Query: 176 LLSYYESHP 184 LL ++ P Sbjct: 202 LLESLDNLP 210 >gi|317484769|ref|ZP_07943668.1| leucyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] gi|316923976|gb|EFV45163.1| leucyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] Length = 836 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 12/198 (6%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K+++K Y+ YP+ H+GH I DV+ARF R+ G +V+ G D G A Sbjct: 32 KDKKKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKRMQGFNVMHPMGWDAFGLPAENA 91 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119 A + V+ N N R L SY D + T ++ ++ ++ + + +KG + Sbjct: 92 AIKHNIHPSVWTHANIDNMRAQLKRLGYSYDWDREVATCDEPYYRWEQLFFLRWLEKGLV 151 Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL-- 176 Y K W + N+ V DG + PV E +F +++ Y D+L Sbjct: 152 YRKKASQNWCPHCNTVLANEQVV----DGLCWRCD-TPVVQKELTQWFLKITDYADELLA 206 Query: 177 -LSYYESH-PEFILPIER 192 LS ES P+ +L ++R Sbjct: 207 DLSKLESGWPDRVLSMQR 224 Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 26/41 (63%) Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 + + G +L G K+SKS GN +DP E+I + G D +R F + Sbjct: 576 LLTQGMVLKDGSKMSKSKGNTVDPTEMIAKYGADTVRLFCL 616 >gi|255527336|ref|ZP_05394214.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|296184931|ref|ZP_06853342.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|255508983|gb|EET85345.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|296050713|gb|EFG90136.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7] Length = 882 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/235 (28%), Positives = 114/235 (48%), Gaps = 19/235 (8%) Query: 255 FWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P V G DI+ F + + + ++P + V HG + +G K+SKSLGN + Sbjct: 478 FYPNSTLVTGYDIIFFWVARMVFSGLYCADDIPF-ENVLIHGIVRDSEGRKMSKSLGNGV 536 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 DP++VI++ G DALR+ L+ A G D Y + ++ N AN I N SR V M L Sbjct: 537 DPLDVIDQYGADALRFTLITGNAPGNDIRYYPERVESSRN--FANKIWN-ASRFVLMNL- 592 Query: 372 DYDGMIPTP----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVD 425 DG I ++ +D+ ILS + +++E+ +N++ + A +V + D Sbjct: 593 --DGEIMNKYKDCKNYSSADKWILSRMNTLIKEVTDNIEKFELGIAAQKVYDFIWGEFCD 650 Query: 426 RYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDILFV 479 Y + KP + + + A V + V V+ LL +P + +I+ L+ Sbjct: 651 WYIELVKP--VMYGDDEEAKGVAFNVLNNVLSTSLQLLHPIMPFITEEIYTHLYT 703 >gi|227542948|ref|ZP_03972997.1| valyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866] gi|227181170|gb|EEI62142.1| valyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866] Length = 886 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 75/312 (24%), Positives = 128/312 (41%), Gaps = 62/312 (19%) Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240 + D ++SR+ + WG +IP DP ++ W + + Sbjct: 418 MHDWTISRQLW-WGHRIPIWYGPNDEVVCCGPDDTPPEGYTQDPD-VLDTWFSSALFPFS 475 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS------------ANLPLPK 288 T G+ D+ D K KF+P + V DIL +W A ++ +P Sbjct: 476 TMGWPDSTDDLK-KFYPTSVLVTAYDIL----FFWVARMMMFGTYAGQMTEGLGEVPF-T 529 Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +F HG + +G K+SKSLGN I+P++ +E+ G DALR+ L R G D D Sbjct: 530 DLFLHGLVRDERGRKMSKSLGNGINPMDWVEDYGADALRFALARGANPGVDLPLGSDA-- 587 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 + N + L + + + + D P +++D IL + V +++ E + + Sbjct: 588 ---GSSARNFVTKLFNAARFALSRGADASAELPAELSDADRWILDRLNEVTRDVNELLDD 644 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465 +A ++ V +D W EL KTN A V V+ Q+ LL Sbjct: 645 YQFAKANEEMFHFV------WDELCDWYLELSKTNFQPA-----VMGHVLDQVLRLLHPT 693 Query: 466 VPKLANKIFDIL 477 +P + ++ L Sbjct: 694 MPFVTETLWTAL 705 >gi|218889730|ref|YP_002438594.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa LESB58] gi|226695264|sp|B7V9C9|SYL_PSEA8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|218769953|emb|CAW25715.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa LESB58] Length = 873 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 + ++EK Y + YP+ + H+GH I DV++R+HR+ G +VL G D G Sbjct: 29 LPDKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQGRNVLQPMGWDAFGMPAEN 88 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118 AA V + N + D L ++ D + T + ++ + L+ ++ +KG Sbjct: 89 AAMKNNVAPAAWTYDNIAYMKSQLDSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGV 148 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175 IY+ + + D+ +++V G G + P+ Y+F+++AY ++ Sbjct: 149 IYRKNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYAEE 201 Query: 176 LLSYYESHP 184 LL ++ P Sbjct: 202 LLESLDNLP 210 >gi|15599182|ref|NP_252676.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa PAO1] gi|107103505|ref|ZP_01367423.1| hypothetical protein PaerPA_01004575 [Pseudomonas aeruginosa PACS2] gi|254236880|ref|ZP_04930203.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa C3719] gi|254242673|ref|ZP_04935995.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa 2192] gi|14285775|sp|Q9HX33|SYL_PSEAE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|9950178|gb|AAG07374.1|AE004816_10 leucyl-tRNA synthetase [Pseudomonas aeruginosa PAO1] gi|126168811|gb|EAZ54322.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa C3719] gi|126196051|gb|EAZ60114.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa 2192] Length = 873 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 + ++EK Y + YP+ + H+GH I DV++R+HR+ G +VL G D G Sbjct: 29 LPDKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQGRNVLQPMGWDAFGMPAEN 88 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118 AA V + N + D L ++ D + T + ++ + L+ ++ +KG Sbjct: 89 AAMKNNVAPAAWTYDNIAYMKSQLDSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGV 148 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175 IY+ + + D+ +++V G G + P+ Y+F+++AY ++ Sbjct: 149 IYRKNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYAEE 201 Query: 176 LLSYYESHP 184 LL ++ P Sbjct: 202 LLESLDNLP 210 >gi|90101542|sp|Q7TUI9|SYV_PROMM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS Length = 929 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 120/289 (41%), Gaps = 32/289 (11%) Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269 +R F + I D + ++ W + +T G+ D ++P V G DI+ Sbjct: 464 ARDQFGEAVVIQQD-EDVLDTWFSSGLWPFSTMGWPDQESADLECWYPTSTLVTGFDIIF 522 Query: 270 FHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALR 326 F + A + +P V+ HG + + K+SKS GN IDP+ +IE G DALR Sbjct: 523 FWVARMTMMAGAFTGRMPF-ADVYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALR 581 Query: 327 YFLVREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 + LVRE+A G+D D D + A N + + L + G TP + Sbjct: 582 FALVREVAGAGQDIRLDYDRKSDTSATVEAARNFANKLWNATRFALMNLGG--ETPASLG 639 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHR----ALAQVISLVSE------VDRYFDAQKPW 434 E D + L + R + M ++ R L + + E D Y + K Sbjct: 640 EPDPASLQLADRWILSRLARMNRDVVERYDSYRLGEAAKCLYEFAWNDICDWYLELSK-- 697 Query: 435 ELKKTNP--DRASTVL-------YVTVEVIRQLAILLQAFVPKLANKIF 474 ++ +P D + VL V +V+ L ++L +P L+ +++ Sbjct: 698 --RRLHPGEDASGEVLADQCTARQVLAKVLADLLVMLHPLMPHLSEELW 744 Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 S I PN H+GHA+ + D + RF RL G +VL GTD Sbjct: 53 SVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGKNVLCLPGTD 97 >gi|90424069|ref|YP_532439.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisB18] gi|90106083|gb|ABD88120.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisB18] Length = 952 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 31/265 (11%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284 ++ W + +T G+ D+ D +++P ++ V G DI+ F W A ++ L Sbjct: 495 VLDTWFSSALWPFSTLGWPDD-DTDCKRYYPTNVLVTGFDIIFF----WVARMMMMGLHF 549 Query: 285 ----PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 P P V+ H + KG K+SKS GNVIDP+ +I++ G DALR+ L A G+D Sbjct: 550 MDDVPFPT-VYIHALVRDEKGAKMSKSKGNVIDPLHLIDDYGADALRFTLAAMAAQGRDI 608 Query: 340 FYDKDGLKKRVNADLANGIGN---LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396 ++ N A + N + + D+D PT T + I R Sbjct: 609 KLASSRVEGYRN--FATKLWNSSRFAEMNACALPADFD---PTAAKQT-LNRWIAHETVR 662 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRAST---VLYVT 451 ++E+ E ++ + A V V D Y + KP L + +P +A T V + Sbjct: 663 AVREVTEAIEAYRFNDAAGAAYRFVWNVYCDWYLELAKPVLLGEDSPAKAETRAMVAWAR 722 Query: 452 VEVIRQLAILLQAFVPKLANKIFDI 476 E+++ LL F+P + +++ + Sbjct: 723 DEILK----LLHPFMPFITEELWAV 743 Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust. Identities = 62/270 (22%), Positives = 105/270 (38%), Gaps = 48/270 (17%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 + R+ + S I PN H+GHA + D+L RF R+ G DVL+ GTD Sbjct: 31 ERRDAIPFSIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTD------- 83 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 +AG+ T++ V++ R D+ + F+ + ++ ++ ++ Sbjct: 84 ----HAGIATQMVVERQLME-RQEPSRRDMGREKFLERVWQWKAESGGVIVNQLK----- 133 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 G W R + DE A + + H +G Y+DK L Sbjct: 134 RLGASCDWSRER----FTMDEGLSRAVAKVFVELHR-------QGLI-----YKDKRLVN 177 Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI-PDDPQYIMYVWIDALTNY 238 ++ P+ + I VK L L R D G++ PDDP+ + V Sbjct: 178 WD--PKLLTAISDLEVQQVEVKGNLWHL---RYPLD-GVEFNPDDPETFIVVATTRPETM 231 Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268 L T NPD + HV+G++++ Sbjct: 232 LGDTAVAVNPDDVRYS------HVVGRNVI 255 >gi|171693671|ref|XP_001911760.1| hypothetical protein [Podospora anserina S mat+] gi|170946784|emb|CAP73588.1| unnamed protein product [Podospora anserina S mat+] Length = 948 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 23/202 (11%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 EK Y+ YP+ H+GH IADV+ARFH L G DVL G D G AA Sbjct: 75 EKKYVLPMFPYPSGYLHLGHLRVYTIADVVARFHSLRGHDVLLPMGWDAFGLPAENAAIE 134 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124 G+ + N ++ DV++ S+D R TC + K + K I+ Sbjct: 135 RGIDPATWTKSNIAKMKEQLDVMNGSWD------WSRELATCDPSFYKHTQK--IFLLLR 186 Query: 125 SGWYSLRDEAYYNDDEVYKG--------ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 + +DEA N D V K A+G + + V+ + + +F R+S ++D L Sbjct: 187 EQGLAYQDEAEVNYDPVDKTVLANEQVDANGCSWRSGAK-VEKRKLKQWFLRISQFRDSL 245 Query: 177 LSYYE------SHPEFILPIER 192 L E + PE +L +++ Sbjct: 246 LQDLEILSKDNNWPERVLTMQK 267 >gi|296387484|ref|ZP_06876959.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa PAb1] Length = 873 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 + ++EK Y + YP+ + H+GH I DV++R+HR+ G +VL G D G Sbjct: 29 LPDKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQGRNVLQPMGWDAFGMPAEN 88 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118 AA V + N + D L ++ D + T + ++ + L+ ++ +KG Sbjct: 89 AAMKNNVAPAAWTYDNIAYMKSQLDSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGV 148 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175 IY+ + + D+ +++V G G + P+ Y+F+++AY ++ Sbjct: 149 IYRKNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYAEE 201 Query: 176 LLSYYESHP 184 LL ++ P Sbjct: 202 LLESLDNLP 210 >gi|229822567|ref|YP_002884093.1| leucyl-tRNA synthetase [Beutenbergia cavernae DSM 12333] gi|229568480|gb|ACQ82331.1| leucyl-tRNA synthetase [Beutenbergia cavernae DSM 12333] Length = 846 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 10/177 (5%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E+ Y+ T YP+ H+GH +ADVLAR+ R+ G DVLF G D G AA Sbjct: 43 ERRYLVTMFPYPSGDLHMGHGEVFALADVLARYWRMRGYDVLFPIGWDSFGLPAENAAIR 102 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIYKG 122 G + V+ N +S+D R T++ + + ++ ++ ++G Y+ Sbjct: 103 RGESPAVYTSDNIATQAASIRRYGVSFDWTRRFHTSDPEFYRWNQWIFLRMVEQGLAYRA 162 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDKLL 177 S + +D +++V G + + + VQW FFR++ Y D+LL Sbjct: 163 ASSVNWCPQDGTVLANEQVVSGRCERCGTPVVRRDLVQW------FFRITDYADRLL 213 >gi|75675628|ref|YP_318049.1| valyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255] gi|90101537|sp|Q3SSP4|SYV_NITWN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|74420498|gb|ABA04697.1| valyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255] Length = 952 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 124/267 (46%), Gaps = 35/267 (13%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D + +++P ++ V G DI+ +W A ++ + Sbjct: 495 VLDTWFSSALWPFSTLGWPDETPEVR-RYYPTNVLVTGFDII----FFWVARMMMMGIHF 549 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K+ V+ H + KG K+SKS GNVIDP+ ++++ G DALR+ L G+D Sbjct: 550 MKEAPFSTVYIHALVRDEKGAKMSKSKGNVIDPLNLVDKYGADALRFTLAAMAVQGRD-- 607 Query: 341 YDKDGLKKRVNADLANGIGNLVSR--SVSMILKDYDGMIPT---PGAFTES-DESILSVC 394 +++ G N ++ + + D ++P P A TE+ + I+ Sbjct: 608 -------IKLSPQRVEGYRNFATKFWNACRFAEMNDCVVPARFDPTAATETLNRWIVHET 660 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRAST---VLY 449 +R E+ E +++ + A + + V V D Y + KP L + +P ++ T V + Sbjct: 661 ARTACEVTEAIESSRFNDAASAIYRFVWNVYCDWYLELAKPVILGEDSPAKSETRAMVAW 720 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDI 476 E+++ LL F+P + +++ + Sbjct: 721 ARDEILK----LLHPFMPFITEELWAV 743 Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 13/77 (16%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 + RE + I PN H+GHA + DVL RF R+ G DVL+ GTD Sbjct: 31 ERREAEPFTIVIPPPNVTGSLHMGHALNNTLQDVLCRFERMRGRDVLWQPGTD------- 83 Query: 60 KAAQNAGVTTKVFVDQN 76 +AG+ T++ V++ Sbjct: 84 ----HAGIATQMVVERQ 96 >gi|313109428|ref|ZP_07795388.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa 39016] gi|310881890|gb|EFQ40484.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa 39016] Length = 887 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 + ++EK Y + YP+ + H+GH I DV++R+HR+ G +VL G D G Sbjct: 29 LPDKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQGRNVLQPMGWDAFGMPAEN 88 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118 AA V + N + D L ++ D + T + ++ + L+ ++ +KG Sbjct: 89 AAMKNNVAPAAWTYDNIAYMKSQLDSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGV 148 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175 IY+ + + D+ +++V G G + P+ Y+F+++AY ++ Sbjct: 149 IYRKNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYAEE 201 Query: 176 LLSYYESHP 184 LL ++ P Sbjct: 202 LLESLDNLP 210 >gi|189485331|ref|YP_001956272.1| leucyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287290|dbj|BAG13811.1| leucyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 818 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 23/201 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ H+GH I DV ARFH++ G +VL G D G A+ Sbjct: 31 KEKYYCLVMLPYPSGNLHMGHVRNYSIGDVFARFHKMTGKNVLHPMGWDAFGL----PAE 86 Query: 64 NAGVTTKV----FVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDK 116 NA + K+ + QN + R+ VL ISYD +F T + ++ + + K+ ++ Sbjct: 87 NAAIKNKIHPAKWTKQNIAHMREQLKVLGISYDWNREFATCTPE-YYRWNQWFFIKMWER 145 Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY--YNAQHNPVQWMEEEGYFFRLSAYQD 174 G I++ + + +++V KG + + Q + QW F +++ Y D Sbjct: 146 GLIFRKSANVNWCPSCNTVLANEQVSKGLCWRCDSHTQQRDLEQW------FIKITDYAD 199 Query: 175 KLLSYYE---SHPEFILPIER 192 +LL ++ PE +L +++ Sbjct: 200 ELLEGHKQLCGWPEQVLSMQK 220 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 42/242 (17%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSHGFILHK 299 D +K +W P + +V G + H IY W + + P + + + G + Sbjct: 521 DSAKVNYWMPVNQYVGGIEHACMHLIYSRFWYKVMRDLGIVKHGEPF-ENLLTQGMVTLS 579 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G +SKS GN++ P E+IE+ G D R F + K + +G++ G Sbjct: 580 GSVMSKSKGNIVSPDEIIEKYGADTARLFTLFAAPPQKQLDWSMEGVE---------GCW 630 Query: 360 NLVSRSVSMILKDYDGMIPTPGAF--TESDES-ILSVCSRVLQEIRENMQNQL-IHRALA 415 ++R I + +D ++ T F TE D++ IL + R ++++ +++ + + A++ Sbjct: 631 RFINR----IWRLFD-IVHTKTEFSATEKDKNDILRIMHRTIKKVTVDIEKEFQFNTAIS 685 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 V+ LV+ + Y +N D S +Y TV +L+ F P L +I+D Sbjct: 686 SVMELVNALYTY--------KYHSNDDGISAEVYKTV------ILLMTPFTPHLCEEIWD 731 Query: 476 IL 477 L Sbjct: 732 RL 733 >gi|148255338|ref|YP_001239923.1| valyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] gi|146407511|gb|ABQ36017.1| valyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] Length = 955 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 37/267 (13%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D+ K +++P ++ V G DI+ +W A ++ L Sbjct: 495 VLDTWFSSALWPFSTLGWPDDTPEVK-RYYPTNVLVTGFDII----FFWVARMMMMGLHF 549 Query: 287 PKKV-----FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-- 338 K+V + H + KG K+SKS GNVIDP+ +I+E G DALR+ L A G+D Sbjct: 550 MKEVPFSTVYIHALVRDEKGAKMSKSKGNVIDPLALIDEHGADALRFTLAAMAAQGRDIK 609 Query: 339 -GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT---PGAFTES-DESILSV 393 DG +K AN + N SR M +P P + E+ + I Sbjct: 610 LSTQRVDGYRK-----FANKLWN-ASRFAEM----NGCTVPVGFDPASAKETLNRWIAHE 659 Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRAST---VL 448 + +E+ E ++ + A + V +V D Y + KP L + +P +A T V Sbjct: 660 AAAATREVTEALEAYRFNDAANAIYRFVWDVYCDWYVELAKPTLLGEDSPAKAETRAMVA 719 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFD 475 + E+++ LL F+P + +++ Sbjct: 720 WARDEILK----LLHPFMPFITEALWE 742 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 11/56 (19%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76 H+GHA + D+L RF R+ G DVL+ GTD +AG+ T++ V++ Sbjct: 52 HMGHALNNTLQDILCRFERMRGRDVLWQPGTD-----------HAGIATQMVVERQ 96 >gi|302880066|ref|YP_003848630.1| leucyl-tRNA synthetase [Gallionella capsiferriformans ES-2] gi|302582855|gb|ADL56866.1| leucyl-tRNA synthetase [Gallionella capsiferriformans ES-2] Length = 893 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 6/178 (3%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ K Y + YP+ + H+GH I DVL+R+HR+ G +V+ G D G AA Sbjct: 31 DKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRYHRMKGFNVMQPMGWDAFGLPAENAA 90 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 Q V + N R L + D + T ++ + L+ ++ +KG IY Sbjct: 91 QAHNVPPAAWTYDNINYMRRQLQSLGLGIDWSREVTTCTPEYYRWEQWLFTRLFEKGIIY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 K S + D +++V DG+ + + V+ E YFFR++ Y D+LL+ Sbjct: 151 KKTSSVNWDPVDHTVLANEQVI---DGRGWRSGAL-VEKREIPMYFFRITQYADELLN 204 >gi|148643401|ref|YP_001273914.1| isoleucyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061] gi|148552418|gb|ABQ87546.1| isoleucyl-tRNA synthetase, IleS [Methanobrevibacter smithii ATCC 35061] Length = 1090 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 21/276 (7%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276 +IPD ++ VWID+ + Y + F P D G D R F++ Sbjct: 552 RIPD----VLDVWIDSGVAGWASLYYPQQQEKFNQWF-PYDFITEGHDQTRGWFYSQLGT 606 Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 + +P KKV HGF+L + G+K+SKSLGNV+ P EVIE+ G D LR++L+ Sbjct: 607 GVISMGQVPY-KKVLMHGFVLDEHGKKMSKSLGNVVSPEEVIEKYGADVLRFYLLWASKP 665 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTESDES--ILS 392 D + D L VN + N + N+ V + M L +++ T DE I+S Sbjct: 666 WDDLKFVWDEL-LNVNK-MFNILWNVYVFSTTYMSLDEFNPTKITEKDIILRDEDNWIMS 723 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDRASTVL 448 + +++E+ E+++ H+A ++ + + E + R++ + W ++ +PD+ Sbjct: 724 RANTLVKEVGEDLEKLSFHKATRKINNFILEDLSRWYVRLIRGRTW-VESDDPDKLGA-Y 781 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA-DEN 483 Y I +L +L P + +I++ L DEN Sbjct: 782 YSLYTAIYKLISVLCPIAPHVCEEIYENLVKGVDEN 817 >gi|258511798|ref|YP_003185232.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478524|gb|ACV58843.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 881 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 92/390 (23%), Positives = 161/390 (41%), Gaps = 57/390 (14%) Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 +LR+E Y +E A G + + V+ E +F R+ L L Sbjct: 327 ALREEGYLVKEEPLDHAVG-HCDRCGTVVEPYLSEQWFVRMEPLARDALERARRGELQFL 385 Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQYIMYV---- 230 P R +V + ++D +SR+ + WG +IP DD + ++ Sbjct: 386 P-GRFMKVFEQWLTNVRDWCISRQLW-WGHRIPAWYCASCGQVSVSRDDLDHCLHCGSAD 443 Query: 231 ----------WIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279 W + +T G+ ++ PD A+F+P L V G DIL +W A + Sbjct: 444 VKQDEDVLDTWFSSALWPFSTMGWPEHTPD--LARFYPTSLLVTGYDIL----FFWVARM 497 Query: 280 L------SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 + + +P + V HG + KG+K+SKS GN IDP++VI++ G DALR+ L Sbjct: 498 VFMGVHFTGKMPF-QTVLLHGLLRDAKGQKMSKSKGNGIDPMDVIDKYGADALRFMLASN 556 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---GAFTESDES 389 G D + + ++ N N + N +R V M ++ DG P P + +D Sbjct: 557 TVLGNDLRFSWEKVEGARN--FLNKLWN-AARFVLMNVE--DGFSPQPLEAQSLDLADRF 611 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447 IL ++ + ++ + A V + D Y + K L ++ Sbjct: 612 ILHRLGETIRRVTSALEEYDVGEAARAVYEFTWDEFCDWYIEFAKI-NLYGDREEKKRQT 670 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V + V+ ++ LL ++P + +I+ L Sbjct: 671 QSVLLTVLSRVLALLHPYIPFVTEEIWQAL 700 Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 11/59 (18%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRN 79 H+GHA + + D+ RF R+ G L+ GTD +AG+ T+ V+Q R Sbjct: 53 HLGHALDTTLQDIATRFRRMQGYSTLWVPGTD-----------HAGIATQARVEQALRE 100 >gi|110668577|ref|YP_658388.1| isoleucyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790] gi|121692201|sp|Q18GW3|SYI_HALWD RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|109626324|emb|CAJ52782.1| isoleucine--tRNA ligase [Haloquadratum walsbyi DSM 16790] Length = 1059 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 34/273 (12%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWP 276 ++PD + VWID+ + + G +D P + A + WPAD V D R +W Sbjct: 526 RVPD----VFDVWIDS---SVASWGTIDYPGETDAYDELWPADFIVEAHDQTR--GWFWS 576 Query: 277 AFLL--SANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 + +A +P ++V HGF G K+SKS GN++ P E I+ G D LR +L+ Sbjct: 577 QLGMGTAATGQVPYEEVMMHGFANDENGRKMSKSRGNIVTPEEAIDRAGRDPLRAYLLSH 636 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-----D 387 G D ++ DGL + + N N+ + + D DG P +E D Sbjct: 637 DQQGVDLSFEWDGLGEMQST--LNIFWNVFRFPLPYM--DLDGYDPATADLSEGSMNIVD 692 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDA---QKPWELKKTNPDR 443 E +LS V R + I A+ ++ ++ +V R++ ++ W + + R Sbjct: 693 EWVLSRLQSVKATTRAAWEEYEIDTAVNTILEFITDDVSRFYIKAIRERMWADEDSASKR 752 Query: 444 ASTVLYVTV--EVIRQLAILLQAFVPKLANKIF 474 + TV E IR LL P L +++ Sbjct: 753 GAYATLSTVLDETIR----LLAPIAPYLTEQMY 781 >gi|160902902|ref|YP_001568483.1| valyl-tRNA synthetase [Petrotoga mobilis SJ95] gi|189083631|sp|A9BIJ7|SYV_PETMO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|160360546|gb|ABX32160.1| valyl-tRNA synthetase [Petrotoga mobilis SJ95] Length = 874 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 24/273 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + + K K++P DL V G DI+ F W A ++ Sbjct: 446 VLDTWFSSALWPFSTLGWPEETEDLK-KYYPTDLLVTGFDIIFF----WVARMIMMGEKF 500 Query: 287 PKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + H LH+ G K+SKSLGN +DP+EVI E G D +R+ L A G+D Sbjct: 501 MGEKPFHDVYLHQLVRDKYGRKMSKSLGNGVDPLEVINEYGTDPVRFTLSVLAAQGRDIK 560 Query: 341 YDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397 D D +K AN I N +R V + ++DY+ + D+ IL+ + Sbjct: 561 LDVGSFDAYRK-----FANKIWN-AARFVLLNMEDYEKTVLKDEDLKIEDKWILTRLNST 614 Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 + EI ++++ +A ++ D Y +A K L D+ V V ++V Sbjct: 615 ILEISKDLEVYNYDQAARKLYDFFWNELCDWYIEASKN-RLNSIGKDKL-VVQNVILQVF 672 Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQS 488 LL F+P ++ +++ L + ++ S Sbjct: 673 DSSLRLLHPFMPYISEELWQKLPIEKDSELLIS 705 >gi|116052026|ref|YP_789131.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|122261173|sp|Q02SF5|SYL_PSEAB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|115587247|gb|ABJ13262.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] Length = 873 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 + ++EK Y + YP+ + H+GH I DV++R+HR+ G +VL G D G Sbjct: 29 LPDKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQGRNVLQPMGWDAFGMPAEN 88 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118 AA V + N + D L ++ D + T + ++ + L+ ++ +KG Sbjct: 89 AAMKNNVAPAAWTYDNIAYMKSQLDSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGV 148 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175 IY+ + + D+ +++V G G + P+ Y+F+++AY ++ Sbjct: 149 IYRKNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYAEE 201 Query: 176 LLSYYESHP 184 LL ++ P Sbjct: 202 LLESLDNLP 210 >gi|330832310|ref|YP_004401135.1| valyl-tRNA synthetase [Streptococcus suis ST3] gi|329306533|gb|AEB80949.1| valyl-tRNA synthetase [Streptococcus suis ST3] Length = 883 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 7/145 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + + + Sbjct: 443 VLDTWFSSALWPFSTMGWPDENAADFQRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGSQ 502 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D + Sbjct: 503 PF-KNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561 Query: 344 DGLKKRVNADLANGIGNLVSRSVSM 368 + + N N I N +SR + M Sbjct: 562 EKMDASWN--FINKIWN-ISRYILM 583 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 23/167 (13%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVTT----------KV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 GVT KV + D+ + R+ L +S D+ R T ++ R Sbjct: 100 EQGVTRYDLGREKFLDKVWEWKDEYAATIREQWGKLGLSL-DYQRDRFTLDEGLSKAVRK 158 Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ KG IY+G + W A + + ++K +G +Y+ + Sbjct: 159 VFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|70726264|ref|YP_253178.1| valyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] gi|90108438|sp|Q4L703|SYV_STAHJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|68446988|dbj|BAE04572.1| valine-tRNA ligase [Staphylococcus haemolyticus JCSC1435] Length = 876 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 18/261 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPNIDADDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VIEE G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIEEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I ++ I G + +D+ IL+ + ++ Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGDEFKFEDIDLTGNLSLADKWILTRLNETIE 616 Query: 400 EI---RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 + E + + RAL I D Y + K + + + T V + Sbjct: 617 TVTNLSEKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNGEDEAQKQTTRSVLSYTLD 674 Query: 457 QLAILLQAFVPKLANKIFDIL 477 Q+ +L F+P + KI+ L Sbjct: 675 QIMRMLHPFMPFVTEKIWQSL 695 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 13/75 (17%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D Sbjct: 30 EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMD------- 82 Query: 60 KAAQNAGVTTKVFVD 74 +AG+ T+ VD Sbjct: 83 ----HAGIATQAKVD 93 >gi|223932581|ref|ZP_03624581.1| valyl-tRNA synthetase [Streptococcus suis 89/1591] gi|223898691|gb|EEF65052.1| valyl-tRNA synthetase [Streptococcus suis 89/1591] Length = 883 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 7/145 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + + + Sbjct: 443 VLDTWFSSALWPFSTMGWPDENAADFQRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGSQ 502 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D + Sbjct: 503 PF-KNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561 Query: 344 DGLKKRVNADLANGIGNLVSRSVSM 368 + + N N I N +SR + M Sbjct: 562 EKMDASWN--FINKIWN-ISRYILM 583 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 23/167 (13%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVTT----------KV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 GVT KV + D+ + R+ L +S D+ R T ++ R Sbjct: 100 EQGVTRYDLGREKFLDKVWEWKDEYAATIREQWGKLGLSL-DYQRDRFTLDEGLSKAVRK 158 Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ KG IY+G + W A + + ++K +G +Y+ + Sbjct: 159 VFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|167465172|ref|ZP_02330261.1| valyl-tRNA synthetase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 853 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 14/154 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + D K +++P ++ V G DI+ F W A ++ ++L Sbjct: 422 VLDTWFSSALWPFSTLGWPEQTDDLK-RYFPTNVLVTGYDIIYF----WVARMIFSSLEF 476 Query: 287 P-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K V HG + +G K+SKSLGN IDP+EVI++ G DA+RY L G+D Sbjct: 477 TGQIPFKDVLVHGLVRDAEGRKMSKSLGNGIDPLEVIKQYGADAMRYMLSTSSTPGQDLR 536 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374 + + +++ N AN I N SR M L+ ++ Sbjct: 537 FRWERVEQARN--FANKIWN-ASRFALMNLEGFN 567 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 23/173 (13%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58 ERE I HIGHA + + D++ R R+ G D L+ G+D G K+ Sbjct: 7 EREPYMIVIPPPNVTGMLHIGHALDFTLQDIIIRAKRMQGYDALWLPGSDHAGIATQTKV 66 Query: 59 AKAAQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102 + + GV+ +++ + M LD S + F T ++ Sbjct: 67 EQKLREEGVSRYDLGREAFLEKVWDWKELYAGTIREQWGKMGLSLDFSRERF--TLDEGL 124 Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 R ++ K+ DKG IY+G Y + +D EV YK G Y+ ++ Sbjct: 125 SKAVRKVFVKLYDKGLIYRGKYIINWDPAARTALSDIEVEYKEIQGNLYHLEY 177 >gi|217969623|ref|YP_002354857.1| leucyl-tRNA synthetase [Thauera sp. MZ1T] gi|217506950|gb|ACK53961.1| leucyl-tRNA synthetase [Thauera sp. MZ1T] Length = 875 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 10/187 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K Y + YP+ + H+GH I DVLARFHR+ G +VL G D G AA Sbjct: 32 RPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLARFHRMKGYNVLQPMGWDAFGMPAENAAI 91 Query: 64 NAGVT----TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 V T +D + + +D S + + T ++ + L+ ++ +KG I Sbjct: 92 QNNVPPAKWTYANIDYMKAQLKRLGFAIDWSRE--LATCTPEYYRWEQWLFTRLYEKGLI 149 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 YK + + DE +++V DG+ + + V+ E Y+ +++AY D+LLS Sbjct: 150 YKRLGTVNWDPVDETVLANEQVI---DGRGWRSGAL-VEKREIPMYYMKITAYADELLSA 205 Query: 180 YESHPEF 186 + P++ Sbjct: 206 LDDLPDW 212 >gi|84686162|ref|ZP_01014057.1| valyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84665689|gb|EAQ12164.1| valyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654] Length = 1030 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 68/129 (52%), Gaps = 19/129 (14%) Query: 223 DPQYIMY-VWIDA------LTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAI 273 DP ++Y VW D ++ L G L P+ + AK++P D+ V G DIL F Sbjct: 586 DPSKLVYPVWRDPDVLDTWFSSGLWPIGTLGWPEETPELAKYFPTDVLVTGFDILFF--- 642 Query: 274 YWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRY 327 W A ++ L + +K H LH KG+K+SK+ GNVIDP+E+I+E G DALR+ Sbjct: 643 -WVARMMMMQLAVVEKEPFHTVYLHQLVRDEKGKKMSKTTGNVIDPLEIIDEYGADALRF 701 Query: 328 FLVREIACG 336 A G Sbjct: 702 TNASMAAVG 710 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 H+GHA+ + D+L R+HR+ G D L+ G D G Sbjct: 52 HVGHAFNNTLQDILVRWHRMRGFDTLWQPGQDHAG 86 >gi|262276791|ref|ZP_06054584.1| isoleucine-tRNA ligase [alpha proteobacterium HIMB114] gi|262223894|gb|EEY74353.1| isoleucine-tRNA ligase [alpha proteobacterium HIMB114] Length = 918 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 10/107 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 I+ VW D+ + T T L+N K WPAD+++ G D R FH+ + N Sbjct: 526 IVEVWFDSGS---THTYVLENRQDLK---WPADMYLEGSDQHRGWFHSSLLHSVGTRGNA 579 Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 P K + +HGF++ KG+K+SKSLGNV+ P E+I++ GVD LR ++V Sbjct: 580 PY-KSILTHGFVVDGKGQKMSKSLGNVVAPEEIIKKNGVDILRLWVV 625 Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 27/55 (49%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58 RE+ + Y N HIG A I+ D++ +F +DG D + G D HG I Sbjct: 46 REQFILHDGPPYANGNIHIGTALNKILKDIVIKFKSIDGKDCPYIPGWDCHGLPI 100 >gi|222445643|ref|ZP_03608158.1| hypothetical protein METSMIALI_01283 [Methanobrevibacter smithii DSM 2375] gi|222435208|gb|EEE42373.1| hypothetical protein METSMIALI_01283 [Methanobrevibacter smithii DSM 2375] Length = 1090 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 21/276 (7%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276 +IPD ++ VWID+ + Y + F P D G D R F++ Sbjct: 552 RIPD----VLDVWIDSGVAGWASLYYPQQQEKFNQWF-PYDFITEGHDQTRGWFYSQLGT 606 Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 + +P KKV HGF+L + G+K+SKSLGNV+ P EVIE+ G D LR++L+ Sbjct: 607 GVISMGQVPY-KKVLMHGFVLDEHGKKMSKSLGNVVSPEEVIEKYGADVLRFYLLWASKP 665 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTESDES--ILS 392 D + D L VN + N + N+ V + M L +++ T DE I+S Sbjct: 666 WDDLKFVWDEL-LNVNK-MFNILWNVYVFSTTYMSLDEFNPTKITEKDIILRDEDNWIIS 723 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDRASTVL 448 + +++E+ E+++ H+A ++ + + E + R++ + W ++ +PD+ Sbjct: 724 RANTLVKEVGEDLEKLSFHKATRKINNFILEDLSRWYVRLIRGRTW-VESDDPDKLGA-Y 781 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA-DEN 483 Y I +L +L P + +I++ L DEN Sbjct: 782 YSLYTAIYKLISVLCPIAPHVCEEIYENLVKGVDEN 817 >gi|85374704|ref|YP_458766.1| leucyl-tRNA synthetase [Erythrobacter litoralis HTCC2594] gi|84787787|gb|ABC63969.1| leucyl-tRNA synthetase [Erythrobacter litoralis HTCC2594] Length = 836 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 30/211 (14%) Query: 244 YLDNPDG------SKAKFW-PADLHVIGKDILRFHAIYWP-------AFLLSANLPLPKK 289 YLD +G S+A+ W P D +V G + H IY+ A ++ K Sbjct: 522 YLDAKNGEQAFRESRAEDWMPIDYYVGGLEHASQHLIYFRFISHFLHAIGMTPTSEPVKN 581 Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL--K 347 +G + GEK+SKS GNV+ P E +++ G DALR +++ + +D +D G+ K Sbjct: 582 FLDNGLVKLGGEKMSKSKGNVVIPTEAVDKYGADALRLYILADTPLRRDIDWDDSGIEGK 641 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 +R + + G + S +G P PG T+++++ + +++ +E+ E+++ Sbjct: 642 QRFLSQIWTLAGQIASAPA------LEGE-PAPG--TDAEKAAMRELAKIAKEVAEDLEE 692 Query: 408 QL-IHRALAQVISLVSE----VDRYFDAQKP 433 + H A+A++ S V E V DA+KP Sbjct: 693 RRGFHNAIARLHSFVGELRPLVAGASDAEKP 723 Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 19/184 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++ K Y+ YP+ H+GH I+D +AR R G + L G D G Sbjct: 45 SDKPKRYVLGMFPYPSGNAHMGHVRVYAISDAVARLSRFRGFETLHPLGWDAFGLP---- 100 Query: 62 AQNAGVTTKV-FVDQNSRNFRDMADV------LDISYDDFIRTTEKRHHDTCRILWKKIS 114 A+NA + + RN M D L D I + + + L++ + Sbjct: 101 AENAAIQNNADPAEWTQRNIATMKDEQFSRLGLSFDLDQEINSASPEFYKWTQWLFQTLY 160 Query: 115 DKGDIYKGCYSGW--YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 D +Y+ +GW + D+ +++V DG+ + + PV+ + ++ R++ + Sbjct: 161 DHDLVYRA--NGWVNWDPVDQTVLANEQVI---DGKGWRSG-APVERRQLPQWYVRITRF 214 Query: 173 QDKL 176 L Sbjct: 215 AQSL 218 >gi|193212076|ref|YP_001998029.1| valyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327] gi|193085553|gb|ACF10829.1| valyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327] Length = 902 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 32/271 (11%) Query: 227 IMYVWIDALTNYLTTTGY--LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + LTT G+ L + + F+P D V G DI+ F W A ++ A L Sbjct: 457 VLDTWFSSWLWPLTTLGWTGLHSDNDDLRAFYPTDTLVTGPDIIFF----WVARMIMAGL 512 Query: 285 ------PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 P F+ KG K+SKSLGN DP++VI+ G DALR+ +V G+D Sbjct: 513 HFKGDVPFRDVYFTSIIRDMKGRKLSKSLGNSPDPLKVIDTYGTDALRFTIVYIAPLGQD 572 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSM----ILKDYDGMIPTPGAFTESDESILSVC 394 + ++ K + + A I N SR V M + + + FT E + S Sbjct: 573 VLFGEE--KCELGRNFATKIWN-ASRFVFMQREKLFATSEEFVDAFTNFTPQRELMSSAG 629 Query: 395 SRVLQEIRENMQNQLIHRALAQ-----VISLVSE------VDRYFDAQKPWELKKTNPDR 443 ++ R N + H+A+A ++ +V E D Y +A K +T+ +R Sbjct: 630 LWLMS--RYNAMLERYHQAMANFKVNDMVKIVHEFFWGDYCDWYVEALKSELAGETSEER 687 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + + V V+ + L +P + ++I+ Sbjct: 688 GRHAVCLAVSVLEGVLKALHPVMPFITDEIW 718 >gi|253581500|ref|ZP_04858725.1| valyl-tRNA synthetase [Fusobacterium varium ATCC 27725] gi|251836570|gb|EES65105.1| valyl-tRNA synthetase [Fusobacterium varium ATCC 27725] Length = 886 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 10/152 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ P+ +K F+P V G DI+ F F L Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELETFYPTSTLVTGADIIFFWVARMIMFGLYEMK 508 Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 +P K VF HG + + G K+SKSLGN DP+ +I+E G DA+R+ ++ + G+D + Sbjct: 509 EIPFKDVFFHGIVRDEIGRKMSKSLGNSPDPLNLIDEFGADAIRFSMIYNTSQGQDVHFS 568 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374 + L+ + + AN I N V+R V M L+ +D Sbjct: 569 EKLLE--MGRNFANKIWN-VARFVIMNLEGFD 597 >gi|328951485|ref|YP_004368820.1| leucyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] gi|328451809|gb|AEB12710.1| leucyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] Length = 875 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 8/196 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E EK Y+ YP+ H+GH + DVLARF + G VL G D G A Sbjct: 27 EEGEKQYVLMMFPYPSGDLHMGHLKNYTMGDVLARFKKQQGYTVLHPMGWDAFGLPAENA 86 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119 A GV + +N + ++ ++ I Y D + T ++ + ++ K+ +KG + Sbjct: 87 ALKFGVHPAEWTFKNIASAKESLRLMGILYDWDREVTTCTPEYYRWNQWIFLKMYEKGLV 146 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 Y+ + + + +++V DG+ + + V+ E E ++ R++AY D+LL Sbjct: 147 YRAKGLVNWCPKCQTVLANEQV---VDGRCWRHEDTLVEKKELEQWYLRITAYADRLLQD 203 Query: 180 YE---SHPEFILPIER 192 E PE + ++R Sbjct: 204 LEQLTGWPEKVKAMQR 219 Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust. Identities = 38/186 (20%), Positives = 75/186 (40%), Gaps = 28/186 (15%) Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356 L K +SKSLGN + ++E G D R ++ D + ++G+ + Sbjct: 630 LWKPAVMSKSLGNGVMVGPFVKEQGADIARITILFAAPPENDMVWTEEGV---------S 680 Query: 357 GIGNLVSRSVSMILKDYDGMIPT-----PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 G ++R +D D + P A + +D ++ R L+++ E+ +N + Sbjct: 681 GAWRFLNRVWRRFAEDKDALTTLEDAFDPAALSGADRALYRALHRTLKKVGEDTENLRFN 740 Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471 A+A ++ L++ + Y P + K +R +L F P LA Sbjct: 741 TAIAALMELLNALYEYRHKHAPSPVYK--------------RAVRYYLQMLAPFAPHLAE 786 Query: 472 KIFDIL 477 +++ L Sbjct: 787 EVWHWL 792 >gi|115398550|ref|XP_001214864.1| leucyl-tRNA synthetase, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114191747|gb|EAU33447.1| leucyl-tRNA synthetase, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 983 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 9/196 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +++K YI + YP+ H+GH I+DVLARF+R+ G DVL G D G AA Sbjct: 79 DKQKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHDVLHPMGWDAFGLPAENAA 138 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120 G+ + N + + S+ D + T ++ + ++ K+ +KG Y Sbjct: 139 IERGIDPAEWTRDNIARMKAQLRSISTSFDWDRELATCAPEFYEHTQRIFLKLYEKGLAY 198 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 + Y D+ +++V A+G + + V+ + + +FFR++A+++ LL Sbjct: 199 QAEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEQLNLKQWFFRITAFKEALLKDL 255 Query: 181 ES----HPEFILPIER 192 +S PE +L ++R Sbjct: 256 DSLSGGWPERVLTMQR 271 >gi|206891188|ref|YP_002249023.1| leucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206743126|gb|ACI22183.1| leucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 868 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 11/195 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 ++K Y YP+ + H+GH I DV+AR+ R+ GL VL G D G AA Sbjct: 32 KQKFYCLEMFPYPSGRIHMGHVRNYAIGDVIARYKRMKGLKVLHPMGWDAFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120 GV + +N ++ L +SYD + T ++ + ++ K+ ++G Y Sbjct: 92 KHGVHPAKWTYENIDYMKNQLIKLGLSYDWRREVTTCSPEYYKWNQWIFLKLYERGLAYR 151 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178 K + W N+ + DG + + V+ E E +F +++AY ++LL Sbjct: 152 KSSFVNWCPSCATVLANEQVI----DGACWRCETQ-VEQKELEQWFLKITAYAEELLKDC 206 Query: 179 -YYESHPEFILPIER 192 PE +L ++R Sbjct: 207 DRLTGWPEKVLTMQR 221 Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 44/219 (20%) Query: 286 LPKKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337 PK+V G +H G EK+SKS N+IDP E+IE+ G D +R F + K Sbjct: 576 FPKEV-KDGKCIHCGSSVTVGRVEKMSKSKKNIIDPDEMIEQYGTDTVRVFTLFAAPPEK 634 Query: 338 DGFYDKDGLK------KRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAF---- 383 D + G++ KRV A + + +S GM P + Sbjct: 635 DLEWSSQGVEGAHRFLKRVYALIFKHNKWIREIHISESEASSIGMTEEGHAEPAFYCHSE 694 Query: 384 ---TESDES----ILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWE 435 +ES+ES I+S+ R ++ + +++ + + A+A+++ V+EV Y +P Sbjct: 695 PKRSESEESPISPIISLIHRTIKRVTLDIEKEYQFNTAIARLMEFVNEVYGY----EP-- 748 Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 KT +R V IR ILL F P +A +++ Sbjct: 749 --KTEEERK-----VFKFAIRNFLILLSPFAPHIAEELW 780 >gi|188997245|ref|YP_001931496.1| valyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] gi|188932312|gb|ACD66942.1| valyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] Length = 977 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 24/263 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280 ++ W + T G+ D + F+P L V G DI+ F W A ++ Sbjct: 542 VLDTWFSSALWPFGTLGWPSRKDDLET-FYPTSLLVTGFDIIFF----WVARMIMMGTKF 596 Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 + ++P K V+ H + KGEK+SK+ GNVIDP+E+ E+ G DALR+ L A G+D Sbjct: 597 TNDVPF-KDVYIHALVRDEKGEKMSKTKGNVIDPLEMAEKYGSDALRFTLASLAAQGRDI 655 Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSR 396 +KR+ +N I N S+ V + +DYDG + + D IL+ ++ Sbjct: 656 RLS----EKRIEGYKHFSNKIWN-ASKFVLINSEDYDGKTNLESLSLSIEDYWILTKLNK 710 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454 ++ + ++N + + D Y + K + K + + T L V V Sbjct: 711 TIESSTKELENYRYNEYANILYDFFWHDYCDWYIELSKE-RIYKGSSEEKKTALTVLNFV 769 Query: 455 IRQLAILLQAFVPKLANKIFDIL 477 +R+ LL +P + +I+ L Sbjct: 770 LRESLKLLHPIMPYITEEIYSYL 792 Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 5 EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 +K Y S + PN HIGHA + + D++ R+ R+ G +VL+ G D G Sbjct: 30 KKPYFSVVMPPPNVTGSLHIGHALNVTLQDIMVRYKRMQGYNVLWLPGFDHAG 82 >gi|225550367|ref|ZP_03771316.1| valine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225379521|gb|EEH01883.1| valine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 874 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 20/258 (7%) Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSH 293 L TT + N D +++P L V G DIL F W + +++ + L +K V H Sbjct: 459 LLTTKWNSN-DQFFKRYFPTALMVTGMDILFF----WVSRMMNFSQYLVQKRPFKDVLIH 513 Query: 294 GFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 G I +G+K+SKSLGN IDP ++I E G+D +R F G+D + + L N Sbjct: 514 GLIRDAQGKKMSKSLGNGIDPFDIINEYGLDTMRLFFASSTTVGEDLNFSTERLG--ANW 571 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 + N I N+ ++ + I F + ++ I++ S++ E+ +NM + Sbjct: 572 NYLNKIWNIAKYIENLDEINESFSIQNVHEFCDVNKWIIAELSKLSVEMNKNMDKYNLVV 631 Query: 413 ALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKL 469 A + + + Y + K T + T+ Y V Q+ I+L F P + Sbjct: 632 ATKDLYDFIWNTFASNYLEYTKVLLQDTTFKNETIKTIRY----VFNQILIMLHPFAPNI 687 Query: 470 ANKIFDILFVADENRCFQ 487 + +I+ L +E+ Q Sbjct: 688 SEEIWLNLNQTNESILLQ 705 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 21/35 (60%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHAY+ + D+L R+ +L G D GTD G Sbjct: 53 HIGHAYDFTLPDILMRYKKLQGYDAFIVPGTDHAG 87 >gi|37528097|ref|NP_931442.1| methionyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787534|emb|CAE16637.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 497 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/356 (19%), Positives = 142/356 (39%), Gaps = 54/356 (15%) Query: 16 PNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74 PN H+GH A + AD+ R RL G + +D++ + + A+ G++ Sbjct: 13 PNGDLHVGHIAGPFLSADIFTRTQRLKGKKCYLISYSDDYQSYLQRKAEEIGISAPALAK 72 Query: 75 QNSRNFRDMADVLDISYDDFIRTTEKRH-HDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133 +NS+ ++ ++DI D ++ + + R+ D ++L+ D+G I Y + E Sbjct: 73 ENSKKIQESLILIDIKLDHWLESYDNRYFEDAVKMLYHSCLDQGIIAPKVSLEPYCEKCE 132 Query: 134 AYYNDDEVYKGADGQYYNAQHNPVQ--------------------------WMEEEGYFF 167 + E + + + +P Q + E F Sbjct: 133 KW--GYEAFARGECNHCGESSDPSQCESCAMAPDAFEMKNLRCILCNENVVYKHVERNFL 190 Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLSRKTFDWGIKIPDD 223 L +KL E IL R ++ ++V+ G+K+ ++R + G+K+ D Sbjct: 191 LLPVIAEKL-------KEKILSSPMRPQLTAWVEEVFAHGIKEWGVTRPN-ESGLKLYSD 242 Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---------HVIGKDILRFHAIY 274 + ++ W L YL T L + P DL + +G D H + Sbjct: 243 ENHRIHTWFMGLAGYLATLKELSEKNADTES--PYDLIYDDNTCMVNFLGMDCSYSHILA 300 Query: 275 WPA-FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 +PA LL+ L +++ F+ G+ S S + I ++++ D++R+++ Sbjct: 301 YPAQILLNDELHFKHAFYTNFFLKLDGKDFSTSRNHAIWVKDIVKNACSDSVRFYV 356 >gi|20808023|ref|NP_623194.1| isoleucyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] gi|81481385|sp|Q8R9L3|SYI_THETN RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|20516600|gb|AAM24798.1| Isoleucyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] Length = 932 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 10/107 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 IM VW D+ +++ +PD WPA+L++ G D R F + A Sbjct: 529 IMDVWFDSGSSHAAVLE--THPDLK----WPAELYLEGSDQHRGWFQSSLLTAVATRGKA 582 Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 P K V +HGF++ +G K+SKSLGNV+DP EVI+E G D LR ++V Sbjct: 583 PY-KNVLTHGFVVDGEGRKMSKSLGNVVDPAEVIQEYGADVLRLWVV 628 Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust. Identities = 17/59 (28%), Positives = 28/59 (47%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K +EK + Y N HIG A ++ D++ ++ + G D + G D HG I + Sbjct: 45 KGKEKYILHDGPPYANGDIHIGTAMNKVLKDIVVKYKTMRGYDSPYVPGWDTHGLPIEQ 103 >gi|89069121|ref|ZP_01156494.1| valyl-tRNA synthetase [Oceanicola granulosus HTCC2516] gi|89045294|gb|EAR51360.1| valyl-tRNA synthetase [Oceanicola granulosus HTCC2516] Length = 991 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 116/267 (43%), Gaps = 31/267 (11%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + + T G+ + D K +++P D+ V G+DIL F W A ++ L + Sbjct: 558 VLDTWFSSGLWPIGTLGWPEQTDELK-RYFPTDVLVTGQDILFF----WVARMMMMQLAV 612 Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + H LH KG+K+SK+ GNVIDP+E+I+E G D LR+ A G Sbjct: 613 VGEAPFHTVYLHQLVRDEKGQKMSKTRGNVIDPLEIIDEYGADPLRFANASMAAIG---- 668 Query: 341 YDKDGLKKRVNADLANGIGNLVSR--------SVSMILKDYDGMIPTPGAFTESDESILS 392 G+ K ++ D G N V++ ++ + + P + I+ Sbjct: 669 ----GVLK-LSVDRIKGYRNFVTKLWNACRFAEMNGVFEAGAPPAAPPRPEATVNRWIIG 723 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYV 450 +R+ +E + + A + + V D Y + KP + T +RA T + Sbjct: 724 ETARIREETDAALAAYRFNDAANGLYAFVWGKVCDWYVEFSKPLLMDGTEEERAETRATM 783 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477 VI Q ILL +P + +++ L Sbjct: 784 AW-VIDQCLILLHPIMPFVTEELWGTL 809 Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 H+GHA+ + D+L R+HR+ G D L+ G D G Sbjct: 52 HMGHAFNNTLQDILVRWHRMRGFDTLWQPGQDHAG 86 >gi|329922709|ref|ZP_08278261.1| isoleucine--tRNA ligase [Paenibacillus sp. HGF5] gi|328942051|gb|EGG38334.1| isoleucine--tRNA ligase [Paenibacillus sp. HGF5] Length = 1029 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/267 (26%), Positives = 119/267 (44%), Gaps = 34/267 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281 ++ VW D+ + Y P K KF +PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPYAQYHY---PFEDKEKFEQQYPADMICEGIDQTRGWFYSLLAVSTLFT 569 Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 P K V + G IL G+K+SKS GNVIDP E+IEE G DA R+ L+ + A Sbjct: 570 GKAPY-KAVMATGHILDENGQKMSKSKGNVIDPWEIIEEYGTDAFRWALLADSAPWNSKR 628 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES----ILSVCSR 396 + K G+ + + + + N + + + DG P F SD ILS + Sbjct: 629 FSK-GIVGEAKSKVVDTLVN--THAFLTLYAGIDGYDPKEHDFKGSDHKLDRWILSRLNS 685 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---------NPDRASTV 447 ++Q + + + A+ ++ ++ Y D W ++++ D+ + Sbjct: 686 LIQVVDKGL-------AVNDFLNAAKAIEAYVDELSNWYIRRSRDRFWGSGLGEDKLAAY 738 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIF 474 +T V+ L+ L+ F P L+ IF Sbjct: 739 GTLT-HVLLTLSKLMAPFTPMLSEDIF 764 Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 19/125 (15%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI------------AKAAQN 64 N PHIGH +I D + R+ + G V+ G D HG + + +N Sbjct: 50 NGAPHIGHVLGRVIKDFVGRYQTMKGYHVVRKAGWDTHGLPVELGVEKQLGISGKQEIEN 109 Query: 65 AGVTT-----KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 GV K V + +R++ + + D T E + ++ + I DKG Sbjct: 110 YGVEAFIKKCKASVFEYEHKWRELTEAIAYWTDLDHPYITLENNYIESVWNILATIHDKG 169 Query: 118 DIYKG 122 +Y+G Sbjct: 170 LLYRG 174 >gi|159036691|ref|YP_001535944.1| methionine--tRNA ligase [Salinispora arenicola CNS-205] gi|157915526|gb|ABV96953.1| Methionine--tRNA ligase [Salinispora arenicola CNS-205] Length = 671 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 96/461 (20%), Positives = 183/461 (39%), Gaps = 47/461 (10%) Query: 7 LYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 +++ + PN H+GH + + AD RF R++G + TG+D++ + A+ Sbjct: 123 VFVFSTPPTPNGDLHLGHLSGPYLGADAFVRFQRMNGTEAWHLTGSDDYQSYVVNTARRE 182 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKGCY 124 G + S ++DI+ D + T TE + R + ++ G Sbjct: 183 GRAPAETAARYSAEIAQTLAMMDINPDQYTVTDTEPGYRQGLRNFFSQVIASGRATVTER 242 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 + Y + +V G G + N EE G + + + ++ P Sbjct: 243 DALFDGESGRYLYEADVRGGCPGCGESTSGNIC---EECGEPNTVVDLRQPRSNESDAEP 299 Query: 185 E------FILPIER-RNEV-----ISFVKSGLKDLS---LSRKTFD--------WGIKIP 221 + LP+ + R+EV + V + L++L +R D WG+ Sbjct: 300 RRAPLARWSLPLHQFRDEVSTHHSLGRVPARLRELGDRLFARPVLDIPLSHPADWGVPPA 359 Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADL--------HVIGKDILRF 270 D +++VW + +L L G++ + W A + H G D + Sbjct: 360 EKDVDDQVIWVWPEMSYGFLHGIEAL----GARLGRGWQAAVPEQDWKIVHFFGYDNSFY 415 Query: 271 HAIYWPAFLLSANLPLPKKVFSH--GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 HA+ +P A+ + H F L +GEK S S + I E+++E VDA+RYF Sbjct: 416 HAVLYPVLYRLAHPGWQPDIDYHVNEFYLLEGEKFSTSRRHAIWGKEILDEDTVDAVRYF 475 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L R + + + + ++ L ++ + I + YDG P G +T Sbjct: 476 LSRTRPEAERTNFRRADFRSVLHDTLIGTWQRWLNDLGARIARHYDGKAPDAGIWTPEHS 535 Query: 389 SILSVCSRVLQEIRENMQNQ--LIHRALAQVISLVSEVDRY 427 + L+ L + ++ +++A A++ +LV+E R+ Sbjct: 536 AFLARLGGRLDAVTGCLRADGFSLNQAAAELDALVAETLRF 576 >gi|78780160|ref|YP_398272.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312] gi|78713659|gb|ABB50836.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312] Length = 918 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 30/288 (10%) Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269 + K F IK+ D ++ W + +T G+ + D K++P + V G DI+ Sbjct: 455 ANKKFGLNIKLVRDKD-VLDTWFSSGLWPFSTLGWPNTNDPDFKKWYPNSVLVTGFDIIF 513 Query: 270 FHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGV 322 F W A + + N+P + V+ HG + +K+SKS GN IDPI +IE+ G Sbjct: 514 F----WVARMTMMGNTFTNNIPF-RDVYIHGLVRDENNKKMSKSSGNGIDPILLIEKYGS 568 Query: 323 DALRYFLVREIA-CGKDGFYDKDGLKKRVNA-DLANGIGNLVSRSVSMILKDYDGMIPTP 380 DALR+ L+RE+A G+D D D K + + + N + + +L + Sbjct: 569 DALRFALIREVAGAGQDIRLDFDRKKDTSSTVEASRNFANKLWNATKFVL--INKTSNNN 626 Query: 381 GAFTESDESILSVCSR----VLQEIRENMQNQLIHRALAQVISLVSE------VDRYFD- 429 + ESDE L +C + L ++ + L L + L+ E D Y + Sbjct: 627 YSLNESDEDSLELCDKWILSKLNQVNIKVAALLKEYKLGESAKLLYEFTWNDFCDWYVEF 686 Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 A++ + K+ + S V ++V+ + +++ F+P + +++ L Sbjct: 687 AKQRFNNKEIKNRQLSE--KVLIKVLNDILVMIHPFMPHITEELWHAL 732 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 13/76 (17%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 H+GHA+ + DV+ RF RL G +VL GTD +A + + +++ ++ Sbjct: 57 HMGHAFNTALIDVVVRFQRLLGKNVLCLPGTD-----------HASIAVQTILEKQLKSE 105 Query: 81 RDMADVLDISYDDFIR 96 +D DI D+F++ Sbjct: 106 GKTSD--DIGRDEFLK 119 >gi|330723608|gb|AEC45978.1| valyl-tRNA synthetase [Mycoplasma hyorhinis MCLD] Length = 831 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 85/350 (24%), Positives = 152/350 (43%), Gaps = 56/350 (16%) Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL-PIERRNEVISFVKSGLKDLSLSRKTFD 215 V+ + + +F + LL + S + + P + R +IS++++ + D ++SR+ + Sbjct: 347 VEILVQPQWFISMKKLAQNLLEHLNSKDKVLFYPSKFRKTMISWMEN-VHDWTISRQLW- 404 Query: 216 WGIKIP------------DDP-------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256 WG +IP +P + ++ W + G+ D K K++ Sbjct: 405 WGHRIPVWYKNEEIKVQKQNPGAGWIQDEDVLDTWFSSGLTPFVFLGWPQKLDIVK-KYY 463 Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNV 310 P +L V G DI+ F W A + L + KK V HG I G+K+SKSLGN Sbjct: 464 PTNLLVTGWDIIFF----WVARMYFLALEITKKKPFNAVLLHGLIRDMNGKKMSKSLGNG 519 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 IDP+EVIEE G D LR L+ G+D ++ + L L N + N+ S+ Sbjct: 520 IDPMEVIEEYGSDVLRATLIFNSTPGQDIKFNIEKL--NAAWSLNNKLWNIAKYIKSLES 577 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 K + L+V ++ + + LI +++ + + F+ Sbjct: 578 KKTKQNFVDLWILNK-----LTVLNKTISKYMNKYNFSLISKSINEFV---------FED 623 Query: 431 QKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 W EL K + + Y +V++++ I+L F+P L + +F +F Sbjct: 624 FSSWYIELNKLHQNG-----YHLRKVLKKVLIVLHPFIPFLTDYLFKEIF 668 Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 4/56 (7%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 S + PN + H+GHA++ + D + RF +L G DVLF D G IA A+ Sbjct: 35 SIILPPPNVTGKLHLGHAWDSYLQDTIIRFKKLKGYDVLFLPAVDHAG--IATQAK 88 >gi|153004343|ref|YP_001378668.1| valyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] gi|152027916|gb|ABS25684.1| valyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] Length = 1052 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 19/261 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ ++ D + F+P + G DI+ +W A ++ + Sbjct: 459 VLDTWFSSALWPFSTMGWPEDTDTLRT-FYPTSVMETGHDII----FFWVARMMMMGIHF 513 Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +V LH KG+K+SK+ GNVIDP+ + E+ G DALR+ L A G+D Sbjct: 514 MGEVPFRTVYLHPMVRDEKGQKMSKTKGNVIDPLVITEQYGADALRFTLAALTAQGRDIK 573 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKD--YDGMIPTPGAFTESDESILSVCSRVL 398 KD ++ AN + N +R M L+ + + PT A T +D IL+ R + Sbjct: 574 LAKDRIEG--YRAFANKLWN-ATRFALMNLEGHVHQAVDPTKLAMTPADRWILARTQRAV 630 Query: 399 QEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 + ++ + A V V D Y + K L + + + ++ Sbjct: 631 NDTVTALEGLRFNEAANTVYQFVWGELCDWYIELAKE-ALYGDDAGKKAAAQATLTHALK 689 Query: 457 QLAILLQAFVPKLANKIFDIL 477 +LL F+P + +++ +L Sbjct: 690 TALLLLHPFMPFITEELWHVL 710 Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 14/96 (14%) Query: 3 EREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +R + S + PN H+GHA + DVL R+ R+ G + L+ GTD Sbjct: 38 DRSRPPFSIVLPPPNVTGSLHLGHALTATLQDVLIRWKRMSGFNTLWLPGTD-------- 89 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96 +AG+ T++ V++ R ++ D+ ++F++ Sbjct: 90 ---HAGIATQMIVEKELRKTEKLSR-HDLGREEFLK 121 >gi|37679095|ref|NP_933704.1| leucyl-tRNA synthetase [Vibrio vulnificus YJ016] gi|48428521|sp|Q7MN06|SYL_VIBVY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|37197837|dbj|BAC93675.1| leucyl-tRNA synthetase [Vibrio vulnificus YJ016] Length = 857 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 25/258 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++RF RL G +V+ G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N ++ +L YD +F T + ++ + + K+ KG +Y Sbjct: 92 KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYQKGLVY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177 K S + D+ +++V DG + PV+ E +F +++ Y +L L Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206 Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231 E PE + ++R R+E + F G +DL + PD + YV Sbjct: 207 DTLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEVYTTR-------PDTLMGVTYVG 259 Query: 232 IDALTNYLTTTGYLDNPD 249 I A + L +NPD Sbjct: 260 I-AAGHPLAKIAAENNPD 276 >gi|21674370|ref|NP_662435.1| valyl-tRNA synthetase [Chlorobium tepidum TLS] gi|81790947|sp|Q8KC74|SYV_CHLTE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|21647549|gb|AAM72777.1| valyl-tRNA synthetase [Chlorobium tepidum TLS] Length = 901 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 73/265 (27%), Positives = 114/265 (43%), Gaps = 32/265 (12%) Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL------ 284 W+ LT T + DN D F+P D V G DI+ F W A ++ A L Sbjct: 465 WLWPLTTLGWTGPHSDNDD--LRAFYPTDTLVTGPDIIFF----WVARMIMAGLHFKGDV 518 Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 P F+ KG K+SKSLGN DP++VI+ G DALR+ +V G+D + ++ Sbjct: 519 PFRDVYFTSIIRDMKGRKLSKSLGNSPDPLKVIDTYGTDALRFTIVYIAPLGQDVLFGEE 578 Query: 345 GLKKRVNADLANGIGNLVSRSVSM----ILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 K + + A I N SR V M + + + FT E ++S R L Sbjct: 579 --KCELGRNFATKIWN-ASRFVFMQREKLFATREEFVEAFANFTPQRE-LMSSAGRWLMS 634 Query: 401 IRENMQNQLIHRALAQ-----VISLVSE------VDRYFDAQKPWELKKTNPDRASTVLY 449 R N + H+A+A ++ +V E D Y +A K +R + Sbjct: 635 -RYNAMLERYHQAMANFKVNDMVKIVHEFFWGDYCDWYVEALKSELTGDITEERGRHAVC 693 Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474 + V V+ + L +P + ++I+ Sbjct: 694 LAVSVLEGVLKALHPVMPFITDEIW 718 >gi|294501414|ref|YP_003565114.1| valyl-tRNA synthetase [Bacillus megaterium QM B1551] gi|294351351|gb|ADE71680.1| valyl-tRNA synthetase [Bacillus megaterium QM B1551] Length = 880 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 44/270 (16%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ DK + + + +R + ++D +SR+ + WG +IP Sbjct: 364 WFVKMQPLADKAVDLQKQEEKVNFVPDRFEKTYLHWMENIRDWCISRQLW-WGHRIPAWY 422 Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 + ++ W + +T G+ D +++P ++ Sbjct: 423 HKETGEVYVDHEAPADIENWEQDSDVLDTWFSSALWPFSTMGWPDVDAADFKRYYPTNVL 482 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNVIDPIE 315 V G DI+ F W + ++ L K V HG + +G K+SKSLGN +DP+E Sbjct: 483 VTGYDIIFF----WVSRMIFQGLEFTGKRPFDDVLIHGLVRDAEGRKMSKSLGNGVDPME 538 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 VIE+ G D+LRYFL + G+D + + ++ N AN I N + L + DG Sbjct: 539 VIEKYGADSLRYFLSTGSSPGQDLRFSFEKVEATWN--FANKIWN----ASRFALMNMDG 592 Query: 376 M----IPTPGAFTESDESILSVCSRVLQEI 401 + + G + +D+ IL+ + ++ + Sbjct: 593 ITFEELDLSGEKSVADKWILTRLNETIEHV 622 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 67/171 (39%), Gaps = 21/171 (12%) Query: 5 EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-QKIAKA 61 EK + I PN + H+GHA++ + D+L R R+ G DVL+ G D G AK Sbjct: 38 EKEPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYDVLWLPGMDHAGIATQAKV 97 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 + K D NF Y FIR T ++ Sbjct: 98 EEKLRSEGKSRYDLGRENFVAETWKWKEEYASFIRQQWSKLGLGLDYSRERFTLDEGLSK 157 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 R ++ + KG IY+G Y W A + + +YK G +Y+ ++ Sbjct: 158 AVREVFVTLYKKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHMRY 208 >gi|78357880|ref|YP_389329.1| valyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220285|gb|ABB39634.1| valyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 883 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 71/313 (22%), Positives = 135/313 (43%), Gaps = 53/313 (16%) Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQY-------------IMYVWIDALT 236 ++D +SR+ + WG +IP D PQ ++ W + Sbjct: 400 IRDWCISRQIW-WGHRIPAWTCEDCGELIVAMDAPQACKCGSTRLTQDEDVLDTWFSSAL 458 Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296 +T G+ D+ + K +F+P + V G DIL F W A ++ L ++ H Sbjct: 459 WPFSTLGWPDSTEELK-QFYPTSVLVTGFDILFF----WVARMMMMGLQFMDEIPFHHVY 513 Query: 297 LHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350 +H G+K+SKS GNVIDP+E+I++ G D+LR+ L A G+D + ++ Sbjct: 514 IHALVRDEHGKKMSKSTGNVIDPVEMIDKYGTDSLRFTLTAFAAMGRDIKLSEARIEGYR 573 Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410 + N I N +R M L + P P E L+E++ ++ + Sbjct: 574 H--FINKIWN-AARFALMNLPEEQ---PAPCDLAAVQELHHRWILHRLEEVKSSVDSAFT 627 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPD------RASTVLYVTVEVIRQLAILLQA 464 + + + +++ W L+ + PD R + +V V++++ +L+ Sbjct: 628 GYRFNEAAQTLYKF--FWNELCDWYLELSKPDMQAGGERRARAQFVLWTVLKEVLVLMHP 685 Query: 465 FVPKLANKIFDIL 477 +P + +I+++L Sbjct: 686 VMPFVTAEIWNVL 698 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 24/159 (15%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA 59 S I PN H+GHA + + D+L RFHR G VL+ GTD G +++A Sbjct: 41 SIVIPPPNVTGALHMGHALNLTLQDILCRFHRQKGRKVLWVPGTDHAGIATQNVVERQLA 100 Query: 60 KAAQNA-GVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCR 107 + + + + F+++ + R M +D + + F T ++ R Sbjct: 101 REGKGRHDLGREKFIERVWQWREEYGNRILSQIRKMGASVDWTRERF--TMDEGLSRAVR 158 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146 ++ K+ + G IYKG Y + R DDEV A+ Sbjct: 159 QVFVKLYEDGLIYKGNYIINWCPRCHTALADDEVDHSAE 197 >gi|297568453|ref|YP_003689797.1| leucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] gi|296924368|gb|ADH85178.1| leucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] Length = 829 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 92/194 (47%), Gaps = 9/194 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+K Y+ YP+ + H+GH I DV+AR+ R+ G +V+ G D G AA Sbjct: 35 RKKYYVLEMFPYPSGRIHMGHVRNYTIGDVVARYRRMCGDNVIHPMGWDAFGMPAENAAI 94 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G + +N R L +SY D + T + +++ ++ + K+ +KG Y+ Sbjct: 95 KHGTHPAKWTFENIDYMRGQLQRLGLSYDWDRELATCDPKYYRWEQLFFLKMLNKGLAYR 154 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + + +++V GA + A V + +G+F +++AY ++LL+ + Sbjct: 155 KLTTVNWCETCQTVLANEQVINGACWRCDQA----VTPRQMQGWFLKITAYAEELLAGCD 210 Query: 182 ---SHPEFILPIER 192 PE +L ++R Sbjct: 211 RLPGWPEKVLTMQR 224 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 40/259 (15%) Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKI 303 A +W P D ++ G + H +Y F LS + P + + G ++ G K+ Sbjct: 528 ADYWLPVDQYIGGVEHAILHLLYSRFFTKVLRDLGYLSIDEPF-TNLLTQGMVIKDGAKM 586 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNV+DP E+IE+ G D +R F + +D ++ G++ G +S Sbjct: 587 SKSKGNVVDPNELIEQYGADTVRLFSLFAAPPERDLEWNHQGVE---------GAFRFLS 637 Query: 364 RSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418 R +L + + + P E+D ++ + ++++ +++ N + A++ V+ Sbjct: 638 RIHRFVLDNREMLRAAGEELPADLGEADRTLHRKTHQTIRKVSQDIDNSFQFNTAISAVM 697 Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 L + + AQ K+ P V + ++ + LL VP L ++++ L Sbjct: 698 ELSNTLFSLNAAQAD---KQPQP-------AVNRQAVQTMLTLLFPMVPHLCAELWEELG 747 Query: 479 VADENRCFQSLDQRLKPGF 497 A ++LD++ P F Sbjct: 748 QA------EALDRQGWPQF 760 >gi|326693728|ref|ZP_08230733.1| leucyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773] Length = 803 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 9/194 (4%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + K Y YP+ Q H+GH D+++RF R +G +VL G D G + A Sbjct: 30 KPKYYAMDMFPYPSGQGLHVGHPEGYTATDIMSRFKRANGYNVLHPMGWDAFGLPAEQYA 89 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120 G F +N +FR+ L +SY D I TT+ ++ + +++K+ +KG Y Sbjct: 90 MKTGHNPADFTSENIDHFREQIKALGLSYDWDREINTTDPEYYKWTQWIFEKLYEKGLAY 149 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 + + D ++EV G + NPV+ + +++AY D+L+ Sbjct: 150 ESNMMVNWDPIDRVVLANEEVIDGKSER----SGNPVERKALRQWVLKITAYADRLVDDL 205 Query: 181 E--SHPEFILPIER 192 E PE I +R Sbjct: 206 EDLDWPEAIKEQQR 219 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 22/189 (11%) Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFI 296 L +PD K K+W DL+V G + H +Y W FL + K+ F + G I Sbjct: 511 LADPD--KLKYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMI 568 Query: 297 LHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 L + EK+SKS GNV++P +++ E G D LR + + + + ++G+ Sbjct: 569 LGENHEKMSKSKGNVVNPDDIVAEFGADTLRVYEMFMGPLTQSKPWSEEGI--------- 619 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 G + R V +L D +G + S E + + + ++++ E+++N + A++ Sbjct: 620 TGSRRWLDR-VWRLLIDDEGQLRDRVTTVNSGE-LDKIYHQTVKKVTEDLENMRFNTAIS 677 Query: 416 QVISLVSEV 424 Q++ V+E Sbjct: 678 QMMVFVNEA 686 >gi|220906506|ref|YP_002481817.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7425] gi|219863117|gb|ACL43456.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7425] Length = 1242 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 27/289 (9%) Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277 +++ DP ++ W + +T G+ D + ++P V G DI+ F W A Sbjct: 467 VQLEQDPD-VLDTWFSSGLWPFSTLGWPDRTEDLDF-YYPTSTMVTGFDIIFF----WVA 520 Query: 278 FL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 + + +P V+ HG + +K+SK+ GN IDP+ +I++ G DALRY L+ Sbjct: 521 RMTMMGKHFTGTMPF-GDVYIHGLVRDENNKKMSKTAGNGIDPLLLIDKYGADALRYTLI 579 Query: 331 REIA-CGKDGFYDKD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--- 385 RE+A G+D + + + + + N + + ++ + DG P F Sbjct: 580 REVAGAGQDIRMEYNRKTDESATVEASRNFANKLWNASRFVMLNLDGHTPAQLGFPNLAD 639 Query: 386 ---SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTN 440 +D ILS +V+Q+ RE ++ + A + + D Y + K L++ Sbjct: 640 LELADRWILSRYQQVVQQTREQIETYGLGEAAKGLYEFIWGDFCDWYIELVKA-RLREEG 698 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489 R V V+ LL F+P + +++ L AD + F SL Sbjct: 699 TSR-RVAQQVLAHVLEGTLKLLHPFMPHITEELWQTLTQAD-SETFLSL 745 Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust. Identities = 16/32 (50%), Positives = 23/32 (71%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 H+GHA+E + DVL R+HR+ G + L+ GTD Sbjct: 65 HMGHAFESALTDVLIRYHRMKGDNTLWLPGTD 96 >gi|55736545|gb|AAV60187.1| valyl-tRNA synthetase [Streptococcus thermophilus LMG 18311] Length = 901 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 113/261 (43%), Gaps = 18/261 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + + Sbjct: 461 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 520 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D + Sbjct: 521 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 579 Query: 344 DGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILSVCS 395 + + N N I N +SR + M + ++ + A +D IL + Sbjct: 580 EKMDASWN--FINKIWN-ISRYILMNNEGLTLDVARENVAKVAAGQAGNVTDRWILHNLN 636 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 ++++ EN A + + + + D Y + K L N D V + Sbjct: 637 ETIRKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKE-VLYSDNEDEKVITRSVLLY 695 Query: 454 VIRQLAILLQAFVPKLANKIF 474 + Q+ LL +P + +IF Sbjct: 696 TLDQILRLLHPIMPFVTEEIF 716 Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ Sbjct: 58 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEARLA 117 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 +G++ + F+D+ + M +D S + F T ++ R Sbjct: 118 ESGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 175 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ ++ KG IY+G + + + +D EV +K +G +Y+ + Sbjct: 176 KVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNY 223 >gi|261349806|ref|ZP_05975223.1| isoleucine--tRNA ligase [Methanobrevibacter smithii DSM 2374] gi|288860591|gb|EFC92889.1| isoleucine--tRNA ligase [Methanobrevibacter smithii DSM 2374] Length = 1090 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 21/276 (7%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276 +IPD ++ VWID+ + Y + F P D G D R F++ Sbjct: 552 RIPD----VLDVWIDSGVAGWASLYYPQQQEKFNQWF-PYDFITEGHDQTRGWFYSQLGT 606 Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 + +P KKV HGF+L + G+K+SKSLGNV+ P EVIE+ G D LR++L+ Sbjct: 607 GVISMGQVPY-KKVLMHGFVLDEHGKKMSKSLGNVVSPEEVIEKYGADVLRFYLLWASKP 665 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTESDES--ILS 392 D + D L VN + N + N+ V + M L +++ T DE I+S Sbjct: 666 WDDLKFVWDEL-LNVNK-MFNILWNVYVFSTTYMSLDEFNPTKITEKDIILRDEDNWIIS 723 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDRASTVL 448 + +++E+ E+++ H+A ++ + + E + R++ + W ++ +PD+ Sbjct: 724 RANTLVKEVGEDLEKLSFHKATRKINNFILEDLSRWYVRLIRGRTW-VESDDPDKLGA-Y 781 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA-DEN 483 Y I +L +L P + +I++ L DEN Sbjct: 782 YSLYTAIYKLISVLCPIAPHVCEEIYENLVKGVDEN 817 >gi|161611294|ref|YP_139002.2| valyl-tRNA synthetase [Streptococcus thermophilus LMG 18311] gi|90108443|sp|Q5M5J8|SYV_STRT2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS Length = 883 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 113/261 (43%), Gaps = 18/261 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + + Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D + Sbjct: 503 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561 Query: 344 DGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILSVCS 395 + + N N I N +SR + M + ++ + A +D IL + Sbjct: 562 EKMDASWN--FINKIWN-ISRYILMNNEGLTLDVARENVAKVAAGQAGNVTDRWILHNLN 618 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 ++++ EN A + + + + D Y + K L N D V + Sbjct: 619 ETIRKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKE-VLYSDNEDEKVITRSVLLY 677 Query: 454 VIRQLAILLQAFVPKLANKIF 474 + Q+ LL +P + +IF Sbjct: 678 TLDQILRLLHPIMPFVTEEIF 698 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEARLA 99 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 +G++ + F+D+ + M +D S + F T ++ R Sbjct: 100 ESGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ ++ KG IY+G + + + +D EV +K +G +Y+ + Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNY 205 >gi|330828603|ref|YP_004391555.1| Leucyl-tRNA synthetase, class Ia [Aeromonas veronii B565] gi|328803739|gb|AEB48938.1| Leucyl-tRNA synthetase, class Ia [Aeromonas veronii B565] Length = 858 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 9/195 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++EK Y + YP+ + H+GH I DV++R+ RL+G +VL G D G AA Sbjct: 31 DKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLNGKNVLQPIGWDAFGLPAENAA 90 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N ++ +L + Y D I T + ++ + + K+ +KG +Y Sbjct: 91 IKNNTAPAPWTYENIEYMKNQLKMLGLGYDWDREIATCKPDYYRWEQWFFTKLYEKGLVY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178 K S + D +++V D + PV+ E +F +++ Y ++LLS Sbjct: 151 KKTSSVNWCPNDMTVLANEQV---VDNCCWRCD-TPVEQKEIPQWFIKITDYAEELLSDI 206 Query: 179 -YYESHPEFILPIER 192 E PE + ++R Sbjct: 207 DNLEGWPEMVKTMQR 221 >gi|304372814|ref|YP_003856023.1| Valyl tRNA synthetase [Mycoplasma hyorhinis HUB-1] gi|304309005|gb|ADM21485.1| Valyl tRNA synthetase [Mycoplasma hyorhinis HUB-1] Length = 824 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 85/350 (24%), Positives = 152/350 (43%), Gaps = 56/350 (16%) Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL-PIERRNEVISFVKSGLKDLSLSRKTFD 215 V+ + + +F + LL + S + + P + R +IS++++ + D ++SR+ + Sbjct: 347 VEILVQPQWFISMKKLAQNLLEHLNSKDKVLFYPSKFRKTMISWMEN-VHDWTISRQIW- 404 Query: 216 WGIKIP------------DDP-------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256 WG +IP +P + ++ W + G+ D K K++ Sbjct: 405 WGHRIPVWYKNEEIKVQKQNPGAGWIQDEDVLDTWFSSGLTPFVFLGWPQKLDIVK-KYY 463 Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNV 310 P +L V G DI+ F W A + L + KK V HG I G+K+SKSLGN Sbjct: 464 PTNLLVTGWDIIFF----WVARMYFLALEITKKKPFNAVLLHGLIRDMNGKKMSKSLGNG 519 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 IDP+EVIEE G D LR L+ G+D ++ + L L N + N+ S+ Sbjct: 520 IDPMEVIEEYGSDVLRATLIFNSTPGQDIKFNIEKL--NAAWSLNNKLWNIAKYIKSLES 577 Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 K + L+V ++ + + LI +++ + + F+ Sbjct: 578 KKTKQNFVDLWILNK-----LTVLNKTISKYMNKYNFSLISKSINEFV---------FED 623 Query: 431 QKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 W EL K + + Y +V++++ I+L F+P L + +F +F Sbjct: 624 FSSWYIELNKLHQNG-----YHLRKVLKKVLIVLHPFIPFLTDYLFKEIF 668 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 H+GHA++ + D + RF +L G DVLF D G IA A+ Sbjct: 48 HLGHAWDSYLQDTIIRFKKLKGYDVLFLPAVDHAG--IATQAK 88 >gi|54020305|ref|YP_116201.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae 232] gi|81823494|sp|Q5ZZL4|SYV_MYCH2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|53987478|gb|AAV27679.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae 232] Length = 822 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 46/296 (15%) Query: 206 DLSLSRKTFDWGIKIP------------DDP-------QYIMYVWIDALTNYLTTTGYLD 246 D ++SR+ + WG +IP D P + ++ W + + G+ Sbjct: 396 DWTISRQLW-WGHRIPVWYKNDEFKVQIDSPGQGWIQDEDVLDTWFSSGISVFAFLGWPQ 454 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHK-GEKI 303 N D K+ F P L V G DIL F +Y+ + + P +KV HG I + G K+ Sbjct: 455 NFDLIKSYF-PTSLLVTGWDILFFWVARMYFSSLFIMKQKPF-EKVLLHGLIRDEIGRKM 512 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKSLGN +DP+E+IE+ G D LR L+ + GKD ++ + L N L N I N Sbjct: 513 SKSLGNGLDPMEIIEKYGSDTLRQALIFNSSPGKDIKFNIEKLNTAWN--LNNKIWN--- 567 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 ++ + D D P E+ + + R +I +N++ ++ + + Sbjct: 568 --IAKYIADLDTFFAKPDLIDLWMENKIYILKR---QIVKNIKKYNFSVIGTEINNFI-- 620 Query: 424 VDRYFD-AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478 Y D + + EL KT + + +++R++ I+L F+P L + + + +F Sbjct: 621 ---YGDFSSRYIELIKTRKNG-----FYARKLLRKVLIILHPFLPFLTDFLMEKIF 668 Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 13/63 (20%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73 PN Q H+GH++ I D L R+H+L G DVL D +AG+ T+V V Sbjct: 41 PNVTGQLHLGHSWNAFIQDSLVRYHKLQGFDVLLLPSVD-----------HAGIATQVKV 89 Query: 74 DQN 76 +++ Sbjct: 90 EED 92 >gi|77412415|ref|ZP_00788722.1| valyl-tRNA synthetase [Streptococcus agalactiae CJB111] gi|77161529|gb|EAO72533.1| valyl-tRNA synthetase [Streptococcus agalactiae CJB111] Length = 884 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 34/185 (18%) Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------DDPQY- 226 E EF P R N+ + D +SR+ + WG +IP D P+ Sbjct: 379 EDKVEFYPP--RFNDTFMSWMENVHDWVISRQLW-WGHQIPAWYNVNGEMYVGEDAPEGD 435 Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279 ++ W + +T G+ D +++P V G DI+ F W + + Sbjct: 436 GWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRYFPTSTLVTGYDIIFF----WVSRM 491 Query: 280 LSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 + +L + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL Sbjct: 492 IFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGS 551 Query: 334 ACGKD 338 A G+D Sbjct: 552 APGQD 556 Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+D+ + M +D S + F T ++ R Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|25010562|ref|NP_734957.1| valyl-tRNA synthetase [Streptococcus agalactiae NEM316] gi|81457458|sp|Q8E6S0|SYV_STRA3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|23094915|emb|CAD46136.1| valyl-tRNA synthetase [Streptococcus agalactiae NEM316] Length = 884 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 34/185 (18%) Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------DDPQY- 226 E EF P R N+ + D +SR+ + WG +IP D P+ Sbjct: 379 EDKVEFYPP--RFNDTFMSWMENVHDWVISRQLW-WGHQIPAWYNVNGEMYVGEDAPEGD 435 Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279 ++ W + +T G+ D +++P V G DI+ F W + + Sbjct: 436 GWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRYFPTSTLVTGYDIIFF----WVSRM 491 Query: 280 LSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 + +L + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL Sbjct: 492 IFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGS 551 Query: 334 ACGKD 338 A G+D Sbjct: 552 APGQD 556 Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+D+ + M +D S + F T ++ R Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|325283253|ref|YP_004255794.1| Valyl-tRNA synthetase [Deinococcus proteolyticus MRP] gi|324315062|gb|ADY26177.1| Valyl-tRNA synthetase [Deinococcus proteolyticus MRP] Length = 895 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 88/369 (23%), Positives = 149/369 (40%), Gaps = 58/369 (15%) Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 PV+ + E +F + +++L + + P R ++ ++D ++SR+ + Sbjct: 367 PVEPIISEQWFVNVKPMAERVLKGLDDGDMRLTPA-RHEKINRDWLENIRDWNISRQLW- 424 Query: 216 WGIKIP----------------------DDPQY----------IMYVWIDALTNYLTTTG 243 WG +IP DP+Y + W + +T G Sbjct: 425 WGHQIPAWYDEEGNVYVPDRDNPDLDCDQDPRYAHLKLTRDPDVFDTWFSSNLWPFSTLG 484 Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKG 300 + D KF+P + V G DIL F + A+ + P K + HG L KG Sbjct: 485 WPDTDAPDYRKFYPTSVLVTGYDILFFWVARMQMAAYEHTGQAPF-KDIMLHGLYLDSKG 543 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 +K+SKS GN IDP+E+ ++ GVDA R+ G+D +D ++ N AN + N Sbjct: 544 QKMSKSKGNGIDPLELFDQYGVDACRFAFTFLSTGGQDIRHDDRRFEQGRN--FANKLWN 601 Query: 361 ------LVSRSVSMILKDYDGM---IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411 L V + +D G + G + +D I+S S V E + I Sbjct: 602 ATRFALLRLDGVYLPQEDPAGALRELAASGKLSLADRWIISRLSAVSAEASAQLDELDIG 661 Query: 412 RALAQVISLVSE--VDRYFDAQKP-WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468 A+ + + + D Y +A KP E R V V+ Q+ LL F+P Sbjct: 662 AAIRTLYAFAWDEFCDWYIEASKPALEAGDVQTGR------VLKAVLAQILGLLHPFMPF 715 Query: 469 LANKIFDIL 477 + ++++ L Sbjct: 716 ITSELYAAL 724 Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 13/76 (17%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 E K + I PN H+GHA + + D L R+ R+ G + L+ G D Sbjct: 38 ESPKPPFTIVIPPPNVTGNLHLGHALDNTLIDTLTRYKRMAGFEALYLPGMD-------- 89 Query: 61 AAQNAGVTTKVFVDQN 76 +AG++T+V V++ Sbjct: 90 ---HAGISTQVMVERE 102 >gi|296133361|ref|YP_003640608.1| isoleucyl-tRNA synthetase [Thermincola sp. JR] gi|296031939|gb|ADG82707.1| isoleucyl-tRNA synthetase [Thermincola potens JR] Length = 934 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 7/106 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 IM VW D+ +++ L+ P+ WPADL++ G D R F++ + + Sbjct: 530 IMDVWFDSGSSH---KAVLEQPEIWPDLRWPADLYLEGSDQHRGWFNSSLCTSVATTGKA 586 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 P K V +HGF++ +G K+SKSLGN IDP+EVI ++G D LR ++ Sbjct: 587 PY-KTVLTHGFLVDEQGRKMSKSLGNGIDPLEVINKMGADILRLWV 631 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 21/156 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK + Y N H+GH ++ D++ +F +DG D F G D HG I + A Sbjct: 47 KEKFILHDGPPYANGDIHLGHTLNKVLKDIIVKFKSMDGFDAPFVPGWDTHGLPIEQQAI 106 Query: 64 NA-GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR----------------HHDTC 106 A G+ + FR + Y D R KR H + Sbjct: 107 KALGINRH---EVGPVEFRKKCKEYALKYVDIQREQFKRLGCRGDWDNPYLTLQPHFEAK 163 Query: 107 RI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 +I ++ +++ KG IYKG ++ E + E+ Sbjct: 164 QIEVFGEMAKKGYIYKGLKPVYWCASCETALAEAEI 199 >gi|19746507|ref|NP_607643.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS8232] gi|81632599|sp|Q8P040|SYV_STRP8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|19748714|gb|AAL98142.1| putative valine-tRNA ligase [Streptococcus pyogenes MGAS8232] Length = 882 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G D+LR+FL A G+D Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ S E S ++V Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------SLEEAESNVAKVAAS 602 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ +Q I L + I+ V+E Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625 Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 88 ATQAKVEERLR 98 >gi|114319561|ref|YP_741244.1| leucyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1] gi|122312502|sp|Q0ABN3|SYL_ALHEH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|114225955|gb|ABI55754.1| leucyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1] Length = 864 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 14/189 (7%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +E EK Y + YP+ + H+GH I DV++R+ R+ G +VL G D G A Sbjct: 30 REGEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMQGRNVLQPMGWDAFGLPAENA 89 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGD 118 A GV + +N R L +YD +F T + ++ + L+ ++ KG Sbjct: 90 AMKHGVPPARWTRENIETMRGQLQRLGFAYDWDREFA-TCDPEYYRWEQWLFTRLYKKGL 148 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175 +YK + + D+ +++V G G + P QW F R++ Y D+ Sbjct: 149 VYKKTATVNWDPVDQTVLANEQVVDGRGWRSGAVVERRDIP-QW------FLRITDYADE 201 Query: 176 LLSYYESHP 184 LL + P Sbjct: 202 LLEALDELP 210 >gi|327400640|ref|YP_004341479.1| Valyl-tRNA synthetase [Archaeoglobus veneficus SNP6] gi|327316148|gb|AEA46764.1| Valyl-tRNA synthetase [Archaeoglobus veneficus SNP6] Length = 866 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 14/255 (5%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284 ++ W+D+ L TG+ + K +P L G DI+R A Y + L+ + Sbjct: 449 VLDTWMDSSITPLAITGWPYD-----WKEYPTHLRPQGHDIIRTWAFYTILRSLALANKI 503 Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 P + V + + G K+SKSLGN+I P EV+E+ G DALR + + G D + Sbjct: 504 PWYEIVINGMVLGEDGRKMSKSLGNIISPEEVLEKYGADALRQWAATGVV-GSDVIFT-- 560 Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404 K+ + A + R +KDY +D ILS +R+++++ E+ Sbjct: 561 -WKEVIAASRFQQKFWSILRFTMSHIKDYTPSEDDEKLLRIADRWILSKLNRLIKDVDEH 619 Query: 405 MQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462 M+N + AL + S D Y + K L + + +V + L LL Sbjct: 620 MENYRFNEALKAIRSFTWYEYADNYLEIVKN-RLYSGSDEEKRAAKFVLYNAMDALIRLL 678 Query: 463 QAFVPKLANKIFDIL 477 P +A + ++I Sbjct: 679 APITPFIAEECWNIF 693 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 17/136 (12%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKA 61 E+ I T YP HIG+ D +AR+ R+ G +V+F G D HG K Sbjct: 32 EKPHYIIDTPPPYPTGSFHIGNTLNWCYIDFIARYKRMKGYEVMFPQGWDCHGLPTEVKV 91 Query: 62 AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTC 106 + G++ F ++N R L S D ++I T ++ Sbjct: 92 EEMHGISKNDVPREEFRRLCVEFTEKNIEKMRSAMRRLGFSIDWSKEYI-TMYPEYYTKT 150 Query: 107 RILWKKISDKGDIYKG 122 ++ + ++ ++G IYKG Sbjct: 151 QVSFVRMYNQGLIYKG 166 >gi|240949589|ref|ZP_04753924.1| leucyl-tRNA synthetase [Actinobacillus minor NM305] gi|240295847|gb|EER46523.1| leucyl-tRNA synthetase [Actinobacillus minor NM305] Length = 862 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + + YP+ + H+GH I DV++R+ R+ G +VL G D G AA Sbjct: 32 KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N + +L SY D + T ++ + + ++ KG +YK Sbjct: 92 KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + DE +++V++G + PV+ E +F +++ Y ++LL+ + Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLNCLD 207 Query: 182 SHPEF 186 + P++ Sbjct: 208 NLPQW 212 >gi|283470931|emb|CAQ50142.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398] Length = 876 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 13/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P ++ V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNVLVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616 Query: 400 EI 401 + Sbjct: 617 TV 618 Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 30 EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89 Query: 56 QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97 K+ G+T D F + A Y FIR Sbjct: 90 AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128 >gi|260767228|ref|ZP_05876169.1| leucyl-tRNA synthetase [Vibrio furnissii CIP 102972] gi|260617736|gb|EEX42914.1| leucyl-tRNA synthetase [Vibrio furnissii CIP 102972] Length = 858 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 110/260 (42%), Gaps = 30/260 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+ARF RL G +V+ G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARFQRLQGKNVMQPIGWDAFGLPAENAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115 + +N ++ +L YD R TCR + K+ + Sbjct: 92 KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLYE 145 Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175 KG +YK S + D+ +++V DG + PV+ E +F +++AY + Sbjct: 146 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAYAQE 201 Query: 176 LLSYYESH---PEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228 LL ++ PE + ++R R+E + +K +KD + + + PD + Sbjct: 202 LLDDLDNLDGWPEMVKTMQRNWIGRSEGVE-LKFAVKDHAQDLEVY---TTRPDTLMGVT 257 Query: 229 YVWIDALTNYLTTTGYLDNP 248 YV I A + L T NP Sbjct: 258 YVGI-AAGHPLATEAAKSNP 276 >gi|163784806|ref|ZP_02179595.1| valyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] gi|159879925|gb|EDP73640.1| valyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] Length = 629 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 31/229 (13%) Query: 196 VISFVKSGLKDLS--LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK- 252 V S ++ +KD+ + K G ++ + ++ W + T G+ P+ + Sbjct: 196 VFSVIEENIKDVKYFIDLKCEKCGSRVLAQEEDVLDTWFSSALWPFGTLGW---PEKTPE 252 Query: 253 -AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISK 305 K++P L V G DI+ F W A ++ L K+ V+ H + KGEK+SK Sbjct: 253 LQKYYPTSLLVTGFDIIFF----WVARMIMMGLYFTKEKPFSDVYIHALVRDEKGEKMSK 308 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVS 363 + GNVIDP+++ E+ G D+LR+ L A G+D +KR+ + AN I N S Sbjct: 309 TKGNVIDPLDMAEKYGADSLRFTLAALAAQGRDIRLS----EKRIEGYRNFANKIWN-AS 363 Query: 364 RSVSMILKDYDGMI---PTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 + V +K+++G I T + D+ I+S LQ+I N++N + Sbjct: 364 KYVLQNVKNFNGNIIQDITSLELSAEDKWIVS----KLQKIISNLENAI 408 >gi|145596005|ref|YP_001160302.1| valyl-tRNA synthetase [Salinispora tropica CNB-440] gi|145305342|gb|ABP55924.1| valyl-tRNA synthetase [Salinispora tropica CNB-440] Length = 872 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 12/228 (5%) Query: 253 AKFWPADLHVIGKDILRF---HAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLG 308 AKF+P + V G DIL F + + + + P V HG + + G+K+SKS G Sbjct: 475 AKFYPTSVLVTGYDILFFWVARMMMFGLYAMDGRQPF-DVVALHGMVRDEHGKKMSKSFG 533 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 NVIDP+ I+ G DA R+ L R G D ++ + N N + N +R + Sbjct: 534 NVIDPLNWIDRFGADATRFTLTRGANPGGDVAVSEEWCQGSRN--FCNKLWN-ATRFALL 590 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426 G +P+ D +LS +RV E E + +A + + D Sbjct: 591 NGAHTQGALPSATELAPVDRWVLSRLARVTAEAEEQFEAYEFAKACDLLYHFAWDEVCDW 650 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 Y + KP L A T V V+ QL LL +P + ++++ Sbjct: 651 YVELTKP--LLAAGGPAADTTRRVLGHVLDQLLRLLHPVIPFVTDELW 696 >gi|77409780|ref|ZP_00786432.1| valyl-tRNA synthetase [Streptococcus agalactiae COH1] gi|77171610|gb|EAO74827.1| valyl-tRNA synthetase [Streptococcus agalactiae COH1] Length = 655 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 34/185 (18%) Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------DDPQY- 226 E EF P R N+ + D +SR+ + WG +IP D P+ Sbjct: 379 EDKVEFYPP--RFNDTFMSWMENVHDWVISRQLW-WGHQIPAWYNVNGEMYVGEDAPEGD 435 Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279 ++ W + +T G+ D +++P V G DI+ F W + + Sbjct: 436 GWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRYFPTSTLVTGYDIIFF----WVSRM 491 Query: 280 LSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 + +L + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL Sbjct: 492 IFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGS 551 Query: 334 ACGKD 338 A G+D Sbjct: 552 APGQD 556 Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+D+ + M +D S + F T ++ R Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|298243616|ref|ZP_06967423.1| valyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] gi|297556670|gb|EFH90534.1| valyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] Length = 900 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 24/243 (9%) Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLP-KKVFSHGFIL-HKGEKISKSL 307 +++P + G DI+ F W A ++ A + +P ++ HG + KGEK+SKS Sbjct: 486 RYYPTAVMETGYDIIFF----WVARMVMAGIHFMGTVPFSTIYLHGLVRDAKGEKMSKSK 541 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV--NADLANGIGNLVSRS 365 NVIDP+EV+++ G DALR+ L G D +++R+ N + AN I N SR Sbjct: 542 NNVIDPLEVMDKFGTDALRFTLATSSTPGN----DMKLIEERIVGNRNFANKIWN-ASRF 596 Query: 366 VSMILKDYDGMIPTPGAF---TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 V M + G +P A T +D IL +R+ Q + + + + A Q+ Sbjct: 597 VLMSTAEVGGGVPDISAVKPRTLADRWILQRLNRLAQSVTRLINDFQLGEAGRQINDFFW 656 Query: 423 E--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 D Y ++ K +++ R ST + V+ Q LL F+P + +++ L+ Sbjct: 657 SDYCDWYVESAKV-QMQGDEAMRQSTTAILRA-VLDQSLRLLHPFMPFVTEEVWQHLYRL 714 Query: 481 DEN 483 E+ Sbjct: 715 TES 717 >gi|77406180|ref|ZP_00783251.1| valyl-tRNA synthetase [Streptococcus agalactiae H36B] gi|77175220|gb|EAO78018.1| valyl-tRNA synthetase [Streptococcus agalactiae H36B] Length = 883 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 34/185 (18%) Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------DDPQY- 226 E EF P R N+ + D +SR+ + WG +IP D P+ Sbjct: 379 EDKVEFYPP--RFNDTFMSWMENVHDWVISRQLW-WGHQIPAWYNVNGEMYVGEDAPEGD 435 Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279 ++ W + +T G+ D +++P V G DI+ F W + + Sbjct: 436 GWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRYFPTSTLVTGYDIIFF----WVSRM 491 Query: 280 LSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 + +L + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL Sbjct: 492 IFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGS 551 Query: 334 ACGKD 338 A G+D Sbjct: 552 APGQD 556 Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 88 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 89 ATQAKVEERLR 99 >gi|218533035|ref|YP_002423851.1| valyl-tRNA synthetase [Methylobacterium chloromethanicum CM4] gi|218525338|gb|ACK85923.1| valyl-tRNA synthetase [Methylobacterium chloromethanicum CM4] Length = 906 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 34/276 (12%) Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277 + + DP ++ W + +T G+ D A+F+P + V GKDI+ +W A Sbjct: 464 VALTRDPD-VLDTWFSSALWPFSTLGWPDKTP-ELARFYPTNTLVTGKDII----FFWVA 517 Query: 278 FLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 ++ L L + LH KG K+SKS GNV+DP+++I+ G DALR+ L Sbjct: 518 RMMMMGLHLTDQAPFETVYLHTLVRDEKGAKMSKSKGNVVDPVDLIDRFGADALRFTLAA 577 Query: 332 EIACGKD---GFYDKDGLKKRVNADLANGIGNLVSRSVSM----ILKDYDGMIPTPGAFT 384 A G+D G +G + + A + N +R M + D+ P A Sbjct: 578 LAAPGRDIKLGPQRVEGYR-----NFATKLWN-AARFAEMNGCELKADF-----RPEAVR 626 Query: 385 ES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKP-WELKKTN 440 E+ + L+ ++ + E+ + + + A A V V D Y + KP + + + Sbjct: 627 ETLNAWALTEAAKAVTEVAQGITVYRFNDAAAAAYRFVWNVFCDWYLELAKPVLQGEGVD 686 Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 P + +I Q+A LL F+P L +++ I Sbjct: 687 PAARAETQATVAFLIDQIAKLLHPFMPFLTEELWAI 722 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 13/69 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA I D+L RF R+ G DVL+ GTD +AG+ Sbjct: 39 SIVIPPPNVTGSLHMGHALNNTIQDILVRFERMRGKDVLWQPGTD-----------HAGI 87 Query: 68 TTKVFVDQN 76 T++ V++ Sbjct: 88 ATQMVVERK 96 >gi|317011349|gb|ADU85096.1| valyl-tRNA synthetase [Helicobacter pylori SouthAfrica7] Length = 872 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+EVIE+ G D+LR+ L A G+D L+ N + AN + N VS Sbjct: 537 GNVIDPLEVIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKLFNAVS 590 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 21/35 (60%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + D+L R+ R+DG L+ G D G Sbjct: 56 HIGHALTLSLQDILVRYKRMDGYKTLYQPGLDHAG 90 >gi|317486342|ref|ZP_07945172.1| valyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] gi|316922412|gb|EFV43668.1| valyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] Length = 882 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 78/333 (23%), Positives = 140/333 (42%), Gaps = 50/333 (15%) Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDAL 235 ++D +SR+ + WG +IP +DP ++ W + Sbjct: 399 IRDWCISRQIW-WGHRIPAWTCPQCGKLIVSEEDPTSCPDCGSTELVQESDVLDTWFSSA 457 Query: 236 TNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLP-K 288 +T G+ PD +K A F+P + V G DIL F W A ++ L +P K Sbjct: 458 LWPFSTMGW---PDKTKDLATFYPTSVLVTGFDILFF----WVARMMMMGLHFMDQVPFK 510 Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 V+ H + +G K+SKS GNVIDP+ +IE+ G DALR+ L A G+D +D ++ Sbjct: 511 HVYLHALVRDAQGRKMSKSTGNVIDPLVMIEKYGTDALRFTLTAFAAMGRDIRLSEDRIE 570 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 + N + N ++ + +D + + +L V +++ ++ Sbjct: 571 GYRH--FVNKLWNASRFALMNLPEDVPAAVELDKVQGLHHQWLLHRLEEVKKDVDGAIEA 628 Query: 408 QLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465 + A + + D Y + KP ++K+ P R + YV +R+ IL+ Sbjct: 629 YRFNDAAQTLYKFLWNEFCDWYLELIKP-DMKEEGP-RKTEAQYVLWTALREFLILMHPI 686 Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498 +P + +I+ L + L +PG + Sbjct: 687 MPFVTAEIWQALPGGAGSDAAVQLLPEARPGCL 719 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 70/169 (41%), Gaps = 25/169 (14%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN HIGHA + DVL R R G VL+ GTD G + +A Sbjct: 41 SIVIPPPNVTGALHIGHALNHTLIDVLCRHARQKGKKVLWLPGTDHAGIATQNVVERALA 100 Query: 64 NAGVT-----TKVFV--------DQNSR---NFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G T + FV D +R R + D +D + + F T ++ R Sbjct: 101 KEGKTRHDLGREAFVERVWQWKEDYGNRILNQIRMLGDSVDWTRERF--TMDEGLSKAVR 158 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHN 155 ++ ++ +G IYKG Y + R DDEV + G Y+ +++ Sbjct: 159 KVFVELYKEGYIYKGKYIINWCSRCHTALADDEVDHMPEKGHLYHVRYD 207 >gi|313678270|ref|YP_004056010.1| valine--tRNA ligase [Mycoplasma bovis PG45] gi|312950415|gb|ADR25010.1| valine--tRNA ligase [Mycoplasma bovis PG45] Length = 829 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 83/356 (23%), Positives = 163/356 (45%), Gaps = 45/356 (12%) Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208 Y + P++ + +F ++ K++++ +S +R + ++ + + D + Sbjct: 343 YSERSNTPIETLVMPQWFVKMENLAKKVINHLKSADHVKFYPKRFIKTVNNWLANMHDWT 402 Query: 209 LSRKTFDWGIKIP---DDPQYIMYV------WI---DALTNYLTTT----GYLDNP--DG 250 +SR+ + WG +IP + + V W+ D L + ++ +L P D Sbjct: 403 ISRQLW-WGHRIPAWYSGNEVKVQVECPGEGWVQDSDVLDTWFSSGIAPFSFLGWPASDE 461 Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLG 308 +++P +L V G DI+ F + F L P + V HG + + K+SKSL Sbjct: 462 LLKRYYPTNLLVTGYDIIFFWVVRMYFFSLEFTNKKPFETVLLHGLVRDELNRKMSKSLN 521 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK-RVNADLANGIGNLVSRSVS 367 N +DP++VIEE G D+LR+FLV + G D + +KK R L N + N ++R ++ Sbjct: 522 NGVDPVKVIEEYGSDSLRFFLVTSSSPGLDTRF---SIKKIRSAWGLCNKLWN-IARYIN 577 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 M+ D + P A +D I + + +I + M + A +++ + + Sbjct: 578 ML---DDDNVSEPSA---ADIWINNKLKTLQNKISKAMNKYELTIAGSELSNFI------ 625 Query: 428 FDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481 F+ W EL K P++ +E +R+L I+ F+P + + ++ ++ D Sbjct: 626 FNDFSSWYIELLKIYPNKKQ-----ALENLRKLLIIAHPFLPFVTDYLYQSVYKKD 676 Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 20/35 (57%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + I D + R+ +L+G D + G D G Sbjct: 51 HIGHALDQYIQDTILRYKKLEGYDTFYIAGMDHAG 85 >gi|307328450|ref|ZP_07607625.1| valyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] gi|306885862|gb|EFN16873.1| valyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] Length = 877 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 7/178 (3%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284 ++ W + +T G+ + + S KF+P + V G DIL F F L A Sbjct: 457 VLDTWFSSGLWPFSTLGWPEQTE-SMEKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 515 Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P + HG + + G+K+SKS GN ++P++ ++ G DA+R+ L R G D + Sbjct: 516 PPFHTIALHGMVRDQFGKKMSKSFGNAVNPLDWMDTYGSDAVRFTLARGANPGVDVPIGE 575 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 D ++ N AN I N +R M +G +P P + +D ILS + V+ E+ Sbjct: 576 DWVQASRN--FANKIWN-ATRFALMNGATVEGELPAPERLSATDRWILSRLNEVVAEV 630 >gi|126729334|ref|ZP_01745148.1| valyl-tRNA synthetase [Sagittula stellata E-37] gi|126710324|gb|EBA09376.1| valyl-tRNA synthetase [Sagittula stellata E-37] Length = 1029 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 14/124 (11%) Query: 212 KTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269 +TFD +++P DP ++ W + + T G+ + P +++P D+ + G DIL Sbjct: 577 RTFDGPMQLPIFRDPD-VLDTWFSSGLWPIGTLGWPE-PTEEMKRYFPTDVLITGSDILF 634 Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVD 323 F W A ++ L + ++ H LH KG+K+SK+ GNVIDP+E+++E G D Sbjct: 635 F----WVARMIMMQLAVVDEIPFHTVYLHQLVRDEKGKKMSKTTGNVIDPLEIVDEYGAD 690 Query: 324 ALRY 327 ALR+ Sbjct: 691 ALRF 694 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 14/94 (14%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 H+GHA+ + D+L R+HR+ G D L+ G D G IA Q V K+ ++N R Sbjct: 52 HVGHAFNHTLMDILVRWHRMRGFDTLWQPGQDHAG--IATQLQ---VEKKLKAEKNVRR- 105 Query: 81 RDM--ADVLD------ISYDDFIRTTEKRHHDTC 106 DM A+ L+ Y I KR D+C Sbjct: 106 TDMTRAEFLNHVWDWKTQYGGTIIDQMKRIGDSC 139 >gi|312601628|gb|ADQ90883.1| Valyl-tRNA synthetase [Mycoplasma hyopneumoniae 168] Length = 822 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 27/178 (15%) Query: 206 DLSLSRKTFDWGIKIP------------DDP-------QYIMYVWIDALTNYLTTTGYLD 246 D ++SR+ + WG +IP D P + ++ W + + G+ Sbjct: 396 DWTISRQLW-WGHRIPVWYKNDEFKVQIDSPGQGWIQDEDVLDTWFSSGISAFAFLGWPQ 454 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHK-GEKI 303 N D K+ F P L V G DIL F +Y+ + + P +KV HG I + G K+ Sbjct: 455 NFDLIKSYF-PTSLLVTGWDILFFWVARMYFSSLFIMKQKPF-EKVLLHGLIRDEIGRKM 512 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 SKSLGN +DP+E+IE+ G D LR L+ + GKD ++ + L N L N I N+ Sbjct: 513 SKSLGNGLDPMEIIEKYGSDTLRQALIFNSSPGKDIKFNIEKLNTAWN--LNNKIWNI 568 Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 13/63 (20%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73 PN Q H+GH++ I D L R+H+L G DVL D +AG+ T+V V Sbjct: 41 PNVTGQLHLGHSWNAFIQDSLVRYHKLQGFDVLLLPSVD-----------HAGIATQVKV 89 Query: 74 DQN 76 +++ Sbjct: 90 EED 92 >gi|257870820|ref|ZP_05650473.1| leucyl-tRNA synthetase [Enterococcus gallinarum EG2] gi|257804984|gb|EEV33806.1| leucyl-tRNA synthetase [Enterococcus gallinarum EG2] Length = 804 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%) Query: 3 EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++ K Y YP+ Q H+GH D+L+RF R G +VL G D G + Sbjct: 29 DKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRFKRSQGFNVLHPMGWDAFGLPAEQY 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Sbjct: 89 ALDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 148 Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177 Y+ W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 149 YEAEVPVNWVPELGTVIANEEVIDGKSERGGYDVIRKPMRQWM------LKITAYADRLL 202 Query: 178 SYYES--HPEFILPIER 192 E PE I ++R Sbjct: 203 DDLEEVDWPESIKEMQR 219 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 20/185 (10%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+F+ G IL Sbjct: 514 DFDKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLFNQGMILGEN 573 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 EK+SKS GNV++P +VIE+ G D LR + + ++++GL+ G Sbjct: 574 NEKMSKSRGNVVNPDDVIEQYGADTLRMYEMFMGPLDASIAWNENGLE---------GSR 624 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 + R +I+ + M F +D + V ++ ++++ E+ + + A++Q++ Sbjct: 625 KFLDRVWRLIVDENGKMRDRITTF--NDGKLSKVYNQTVKKVTEDFEQLHFNTAISQLMV 682 Query: 420 LVSEV 424 V+E Sbjct: 683 FVNEA 687 >gi|229150434|ref|ZP_04278650.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus m1550] gi|228632927|gb|EEK89540.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus m1550] Length = 1033 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++++ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTGLDDYQFTNAAREIATLVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G V+ G D HG Sbjct: 50 NGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHG 88 >gi|257464816|ref|ZP_05629187.1| leucyl-tRNA synthetase [Actinobacillus minor 202] gi|257450476|gb|EEV24519.1| leucyl-tRNA synthetase [Actinobacillus minor 202] Length = 862 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + + YP+ + H+GH I DV++R+ R+ G +VL G D G AA Sbjct: 32 KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N + +L SY D + T ++ + + ++ KG +YK Sbjct: 92 KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + DE +++V++G + PV+ E +F +++ Y ++LL+ + Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLNCLD 207 Query: 182 SHPEF 186 + P++ Sbjct: 208 NLPQW 212 >gi|229190296|ref|ZP_04317297.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876] gi|228593080|gb|EEK50898.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876] Length = 1033 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++++ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKEKYDVKLTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTGLDDYQFTNAAREIATLVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G VL G D HG Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88 >gi|206972102|ref|ZP_03233050.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134] gi|206733025|gb|EDZ50199.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134] Length = 1033 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++++ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKEKYDVKLTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTGLDDYQFTNAAREIATLVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G VL G D HG Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88 >gi|76786857|ref|YP_329179.1| valyl-tRNA synthetase [Streptococcus agalactiae A909] gi|90108440|sp|Q3K2S4|SYV_STRA1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|76561914|gb|ABA44498.1| valyl-tRNA synthetase [Streptococcus agalactiae A909] Length = 884 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 34/185 (18%) Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------DDPQY- 226 E EF P R N+ + D +SR+ + WG +IP D P+ Sbjct: 379 EDKVEFYPP--RFNDTFMSWMENVHDWVISRQLW-WGHQIPAWYNVNGEMYVGEDAPEGD 435 Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279 ++ W + +T G+ D +++P V G DI+ F W + + Sbjct: 436 GWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRYFPTSTLVTGYDIIFF----WVSRM 491 Query: 280 LSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 + +L + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL Sbjct: 492 IFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGS 551 Query: 334 ACGKD 338 A G+D Sbjct: 552 APGQD 556 Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 88 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 89 ATQAKVEERLR 99 >gi|308063936|gb|ADO05823.1| valyl-tRNA synthetase [Helicobacter pylori Sat464] Length = 872 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN I N VS Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAVS 590 Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + D+LAR+ R+DG L+ G D G Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90 >gi|257415369|ref|ZP_05592363.1| leucyl-tRNA synthetase [Enterococcus faecalis AR01/DG] gi|257157197|gb|EEU87157.1| leucyl-tRNA synthetase [Enterococcus faecalis ARO1/DG] Length = 820 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +EK Y YP+ Q H+GH D+L+R R G +VL G D G + A Sbjct: 46 KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Y Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165 Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178 + + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219 Query: 179 YYE--SHPEFILPIER 192 E PE I ++R Sbjct: 220 DLELVDWPESIKDMQR 235 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 589 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353 EK+SKS GNV++P +V+ + G D LR + L IA ++G RV Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 649 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 + + G + R ++ +D + V + ++++ E+M N + A Sbjct: 650 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 692 Query: 414 LAQVISLVSEVDR 426 ++Q++ V+E ++ Sbjct: 693 ISQLMVFVNEANK 705 >gi|71894019|ref|YP_279465.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae J] gi|90101532|sp|Q4A917|SYV_MYCHJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|71852146|gb|AAZ44754.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae J] Length = 822 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 27/178 (15%) Query: 206 DLSLSRKTFDWGIKIP------------DDP-------QYIMYVWIDALTNYLTTTGYLD 246 D ++SR+ + WG +IP D P + ++ W + + G+ Sbjct: 396 DWTISRQLW-WGHRIPVWCKNDEFKVQIDSPGQGWIQDEDVLDTWFSSGISAFAFLGWPQ 454 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHK-GEKI 303 N D K+ F P L V G DIL F +Y+ + + P +KV HG I + G K+ Sbjct: 455 NFDLIKSYF-PTSLLVTGWDILFFWVARMYFSSLFIMKQKPF-EKVLLHGLIRDEIGRKM 512 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 SKSLGN +DP+E+IE+ G D LR L+ + GKD ++ + L N L N I N+ Sbjct: 513 SKSLGNGLDPMEIIEKYGSDTLRQALIFNSSPGKDIKFNIEKLNTAWN--LNNKIWNI 568 Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 13/63 (20%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73 PN Q H+GH++ I D L R+H+L G DVL D +AG+ T+V V Sbjct: 41 PNVTGQLHLGHSWNAFIQDSLVRYHKLQGFDVLLLPSVD-----------HAGIATQVKV 89 Query: 74 DQN 76 +++ Sbjct: 90 EED 92 >gi|15791020|ref|NP_280844.1| isoleucyl-tRNA synthetase [Halobacterium sp. NRC-1] gi|169236770|ref|YP_001689970.1| isoleucyl-tRNA synthetase [Halobacterium salinarum R1] gi|74568871|sp|Q9HN97|SYI_HALSA RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|10581609|gb|AAG20324.1| isoleucyl-tRNA synthetase [Halobacterium sp. NRC-1] gi|167727836|emb|CAP14624.1| isoleucine--tRNA ligase [Halobacterium salinarum R1] Length = 1070 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 31/301 (10%) Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256 + K + D++++ ++ ++PD + VW+D+ T Y + D + W Sbjct: 505 VDLHKPTVDDITITEDGTEY-TRVPD----VFDVWLDSSVASWGTLNYPEQEDDFD-ELW 558 Query: 257 PADLHVIGKDILRFHAIYWPAFLLS----ANLPLPKKVFSHGFI-LHKGEKISKSLGNVI 311 PADL + D R +W + ++P ++V HG+ + G +SKS G I Sbjct: 559 PADLIMEAHDQTR--GWFWSQLGMGTAALGDVPY-EEVLMHGYANMPDGRGMSKSKGITI 615 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MIL 370 +P EVI+E G D +R FL+ G D + D + + DL N + N+ M L Sbjct: 616 EPNEVIDEYGADPMRMFLLSVTPQGDDMSFSWDETEN-MQRDL-NILWNVFRFPRPYMAL 673 Query: 371 KDYDGMIPTPGAFTES------------DESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 D+D +P ++ DE +LS V + + ++ HRAL V+ Sbjct: 674 DDFDANVPAAFGGDDAGVGIADADLETVDEWLLSRLQHVKADATAHWEDFEQHRALDAVL 733 Query: 419 SLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIFDI 476 V E + RY+ + + + + T Y T++ V+ ++ LL + P + +++ Sbjct: 734 EFVVEDLSRYYVQVVRERMWEDDASASKTAAYATMQRVLLEVVALLAPYAPFVTEELYSH 793 Query: 477 L 477 L Sbjct: 794 L 794 >gi|22536625|ref|NP_687476.1| valyl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|76797752|ref|ZP_00780019.1| valyl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|81455031|sp|Q8E1B5|SYV_STRA5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|22533463|gb|AAM99348.1|AE014212_7 valyl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|76586900|gb|EAO63391.1| valyl-tRNA synthetase [Streptococcus agalactiae 18RS21] Length = 883 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 34/185 (18%) Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------DDPQY- 226 E EF P R N+ + D +SR+ + WG +IP D P+ Sbjct: 379 EDKVEFYPP--RFNDTFMSWMENVHDWVISRQLW-WGHQIPAWYNVNGEMYVGEDAPEGD 435 Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279 ++ W + +T G+ D +++P V G DI+ F W + + Sbjct: 436 GWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRYFPTSTLVTGYDIIFF----WVSRM 491 Query: 280 LSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 + +L + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL Sbjct: 492 IFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGS 551 Query: 334 ACGKD 338 A G+D Sbjct: 552 APGQD 556 Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+D+ + M +D S + F T ++ R Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|315161879|gb|EFU05896.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0645] Length = 820 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +EK Y YP+ Q H+GH D+L+R R G +VL G D G + A Sbjct: 46 KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Y Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165 Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178 + + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219 Query: 179 YYE--SHPEFILPIER 192 E PE I ++R Sbjct: 220 DLELVDWPESIKDMQR 235 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 589 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353 EK+SKS GNV++P +V+ + G D LR + L IA ++G RV Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 649 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 + + G + R ++ +D + V + ++++ E+M N + A Sbjct: 650 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 692 Query: 414 LAQVISLVSEVDR 426 ++Q++ V+E ++ Sbjct: 693 ISQLMVFVNEANK 705 >gi|284161481|ref|YP_003400104.1| isoleucyl-tRNA synthetase [Archaeoglobus profundus DSM 5631] gi|284011478|gb|ADB57431.1| isoleucyl-tRNA synthetase [Archaeoglobus profundus DSM 5631] Length = 1041 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 43/105 (40%), Positives = 55/105 (52%), Gaps = 5/105 (4%) Query: 230 VWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286 VW D+ T GY L D K WPAD G D R F++ + + P Sbjct: 512 VWFDSGVASWGTLGYPLKISDEEFFKIWPADFITEGHDQTRGWFYSQLGASVISFGRAPY 571 Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 K V HGF L +G K+SKSLGNV++P EVI EVGVD R +++ Sbjct: 572 -KTVLMHGFTLDEQGRKMSKSLGNVVEPEEVINEVGVDTFRLYVL 615 Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 15 YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTK 70 Y + H+G A+ +I D + R+ R+ G V T G D HG I K Q G TK Sbjct: 44 YTTGRIHLGTAWNKVIKDTILRYKRMMGYKVTDTPGWDMHGLPIEVKVEQMLGFKTK 100 >gi|315031306|gb|EFT43238.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0017] Length = 804 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +EK Y YP+ Q H+GH D+L+R R G +VL G D G + A Sbjct: 30 KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 89 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Y Sbjct: 90 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 149 Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178 + + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 150 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 203 Query: 179 YYE--SHPEFILPIER 192 E PE I ++R Sbjct: 204 DLELVDWPESIKDMQR 219 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 32/193 (16%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 514 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353 EK+SKS GNV++P +V+ + G D LR + L IA ++G RV Sbjct: 574 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 633 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 + + G + R ++ +D + V + ++++ E+M N + A Sbjct: 634 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 676 Query: 414 LAQVISLVSEVDR 426 ++Q++ V+ ++ Sbjct: 677 ISQLMVFVNVANK 689 >gi|310778382|ref|YP_003966715.1| valyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] gi|309747705|gb|ADO82367.1| valyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] Length = 884 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 26/265 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ PD +K F+P V G DIL F W A ++ L Sbjct: 452 VLDTWFSSALWPFSTLGW---PDKTKELEMFYPTATLVTGADILFF----WVARMIMMGL 504 Query: 285 ----PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 +P + V+ HG + G+K+SKSLGN DP+++I+E G DA+R+ ++ + G+D Sbjct: 505 YEMEEIPFETVYLHGIVRDENGKKMSKSLGNSPDPLKLIDEYGADAIRFTMLYNTSQGQD 564 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG----AFTESDESILSVC 394 + + ++ + + AN N VSR V M L+ +D I + G D+ I S Sbjct: 565 VHFSEKLIE--MGRNFANKTWN-VSRFVLMNLEGFD--IKSVGKNELKLELVDKWIFSKF 619 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452 ++ +++ + + A V + D Y + K + T YV Sbjct: 620 NKTAKDVAAKLDKNTLDEAAKSVYEFLRGDFCDWYVEMAKVRLYNAEDEVSKKTAQYVLW 679 Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477 ++ LL F+P L +I+ L Sbjct: 680 TILESSLRLLHPFMPFLTEEIWQKL 704 >gi|154151263|ref|YP_001404881.1| valyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8] gi|153999815|gb|ABS56238.1| valyl-tRNA synthetase [Methanoregula boonei 6A8] Length = 864 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 27/262 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285 ++ W+D+ + L TG+ DGS K K +PA + G DI+R A Y + L S L Sbjct: 449 VLDTWMDSSISVLNVTGW----DGSGKPKIFPAQIRPQGHDIIRTWAFY--SILRSVALT 502 Query: 286 LPK---KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341 K ++ +G +L + G K+SKS GNVI P +++ G DALR + A G D + Sbjct: 503 GSKPWDQILVNGMVLGEDGFKMSKSRGNVIVPEDLVGRYGADALRQWAATGAALGSDIMF 562 Query: 342 DKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399 + + R + N ++R ++I + +G+ +D +L+ S + Sbjct: 563 SWNDVIAASRFQTKMWN-----IAR-FALIQLEKEGIDENAPITALADRWLLARLSDTVA 616 Query: 400 EIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRAST--VLYVTVEVI 455 + M+N AL ++ +V D Y + K L + R S VLY + Sbjct: 617 TVSARMENYEFDEALKEIREFAWDVLADNYIELAKG-RLYAGDASRKSACRVLYTAYDA- 674 Query: 456 RQLAILLQAFVPKLANKIFDIL 477 L +L FVP A + + L Sbjct: 675 --LCRMLAPFVPYFAEECYSYL 694 Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 2/99 (2%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ + I T YP HIG+A D AR+ R+ G +V+F G D HG Sbjct: 36 KKPQFVIDTPPPYPTGNFHIGNALNWCYIDFFARYKRMKGYNVMFPQGWDCHGLPTEVKV 95 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101 + TK D + FR M L + + +R T +R Sbjct: 96 EELNHITK--NDVSREEFRKMCRELTLKNIEQMRLTLRR 132 >gi|254361090|ref|ZP_04977235.1| leucine--tRNA ligase [Mannheimia haemolytica PHL213] gi|153092576|gb|EDN73631.1| leucine--tRNA ligase [Mannheimia haemolytica PHL213] Length = 861 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + + YP+ + H+GH I DV++R+ R+ G +VL G D G AA Sbjct: 32 KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N + +L SY D + T ++ + + ++ KG +YK Sbjct: 92 KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + DE +++V++G + PV+ E +F +++ Y ++LL+ + Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLNQLD 207 Query: 182 SHPEF 186 + P++ Sbjct: 208 NLPQW 212 >gi|315151630|gb|EFT95646.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0012] Length = 820 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +EK Y YP+ Q H+GH D+L+R R G +VL G D G + A Sbjct: 46 KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Y Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165 Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178 + + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219 Query: 179 YYE--SHPEFILPIER 192 E PE I ++R Sbjct: 220 DLELVDWPESIKDMQR 235 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 589 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353 EK+SKS GNV++P +V+ + G D LR + L IA ++G RV Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 649 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 + + G + R ++ +D + V + ++++ E+M N + A Sbjct: 650 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 692 Query: 414 LAQVISLVSEVDR 426 ++Q++ V+E ++ Sbjct: 693 ISQLMVFVNEANK 705 >gi|256854338|ref|ZP_05559702.1| leucyl-tRNA synthetase [Enterococcus faecalis T8] gi|256709898|gb|EEU24942.1| leucyl-tRNA synthetase [Enterococcus faecalis T8] gi|323479993|gb|ADX79432.1| leucyl-tRNA synthetase [Enterococcus faecalis 62] Length = 804 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +EK Y YP+ Q H+GH D+L+R R G +VL G D G + A Sbjct: 30 KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 89 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Y Sbjct: 90 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 149 Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178 + + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 150 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 203 Query: 179 YYE--SHPEFILPIER 192 E PE I ++R Sbjct: 204 DLELVDWPESIKDMQR 219 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 514 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353 EK+SKS GNV++P +V+ + G D LR + L IA ++G RV Sbjct: 574 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 633 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 + + G + R ++ +D + V + ++++ E+M N + A Sbjct: 634 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 676 Query: 414 LAQVISLVSEVDR 426 ++Q++ V+E ++ Sbjct: 677 ISQLMVFVNEANK 689 >gi|227554917|ref|ZP_03984964.1| leucyl-tRNA synthetase [Enterococcus faecalis HH22] gi|227175943|gb|EEI56915.1| leucyl-tRNA synthetase [Enterococcus faecalis HH22] gi|315573422|gb|EFU85613.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0309B] gi|315581340|gb|EFU93531.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0309A] Length = 820 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +EK Y YP+ Q H+GH D+L+R R G +VL G D G + A Sbjct: 46 KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Y Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165 Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178 + + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219 Query: 179 YYE--SHPEFILPIER 192 E PE I ++R Sbjct: 220 DLELVDWPESIKDMQR 235 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 589 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353 EK+SKS GNV++P +V+ + G D LR + L IA ++G RV Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 649 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 + + G + R ++ +D + V + ++++ E+M N + A Sbjct: 650 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 692 Query: 414 LAQVISLVSEVDR 426 ++Q++ V+E ++ Sbjct: 693 ISQLMVFVNEANK 705 >gi|72080999|ref|YP_288057.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448] gi|90101531|sp|Q4A755|SYV_MYCH7 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|71914123|gb|AAZ54034.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448] Length = 822 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 27/178 (15%) Query: 206 DLSLSRKTFDWGIKIP------------DDP-------QYIMYVWIDALTNYLTTTGYLD 246 D ++SR+ + WG +IP D P + ++ W + + G+ Sbjct: 396 DWTISRQLW-WGHRIPVWCKNDEFKVQIDSPGQGWIQDEDVLDTWFSSGISAFAFLGWPQ 454 Query: 247 NPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHK-GEKI 303 N D K+ F P L V G DIL F +Y+ + + P +KV HG I + G K+ Sbjct: 455 NFDLIKSYF-PTSLLVTGWDILFFWVARMYFSSLFIMKQKPF-EKVLLHGLIRDEIGRKM 512 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 SKSLGN +DP+E+IE+ G D LR L+ + GKD ++ + L N L N I N+ Sbjct: 513 SKSLGNGLDPMEIIEKYGSDTLRQALIFNSSPGKDIKFNIEKLNTAWN--LNNKIWNI 568 Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 13/63 (20%) Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73 PN Q H+GH++ I D L R+H+L G DVL D +AG+ T+V V Sbjct: 41 PNVTGQLHLGHSWNAFIQDSLVRYHKLQGFDVLLLPSVD-----------HAGIATQVKV 89 Query: 74 DQN 76 +++ Sbjct: 90 EED 92 >gi|311031449|ref|ZP_07709539.1| valyl-tRNA synthetase [Bacillus sp. m3-13] Length = 882 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P V G DI+ F W + ++ L Sbjct: 448 VLDTWFSSALWPFSTMGWPETESLDYQRYYPTSTLVTGYDIIFF----WVSRMIFQGLEF 503 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K V HG + +G K+SKSLGN +DP+EVIE+ G D+LRYFL + G+D Sbjct: 504 TGERPFKDVLIHGLVRDEQGRKMSKSLGNGVDPMEVIEKYGADSLRYFLSTGSSPGQDLR 563 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399 + + ++ N AN I N SR M + D I G + +D+ IL+ + ++ Sbjct: 564 FSYEKVESTWN--FANKIWN-ASRFALMNMDDMKFEDIDLSGEKSVADKWILTRLNETIE 620 Query: 400 EI 401 + Sbjct: 621 TV 622 Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 13/79 (16%) Query: 3 EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 +++K + I PN + H+GHA++ + D++ R R+ G DVL+ G D Sbjct: 36 DQDKTPYTIVIPPPNVTGRLHLGHAWDTTLQDIITRMKRMQGFDVLWLPGMD-------- 87 Query: 61 AAQNAGVTTKVFVDQNSRN 79 +AG+ T+ VD+ RN Sbjct: 88 ---HAGIATQAKVDEKLRN 103 >gi|330432437|gb|AEC17496.1| leucyl-tRNA synthetase [Gallibacterium anatis UMN179] Length = 860 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++R+ R++G +VL G D G AA Sbjct: 32 KEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMNGKNVLQPIGWDAFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + N ++ +L SY D I T + +++ + + ++ KG IYK Sbjct: 92 KNKAAPATWTYDNIEYMKNQLKMLGFSYDWDREIATCKPQYYKWEQWFFTELYKKGLIYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + D+ +++V DG + PV+ E +F +++ Y ++LL + Sbjct: 152 KTSTVNWCPNDQTVLANEQV---NDGCCWRCD-TPVEQKEIPQWFVKITDYAEQLLQGLD 207 Query: 182 SHPEF 186 PE+ Sbjct: 208 QLPEW 212 >gi|261839881|gb|ACX99646.1| valyl-tRNA synthetase [Helicobacter pylori 52] Length = 872 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN I N VS Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAVS 590 Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + D+LAR+ R+DG L+ G D G Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90 >gi|229548742|ref|ZP_04437467.1| leucyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|255973878|ref|ZP_05424464.1| leucyl-tRNA synthetase [Enterococcus faecalis T2] gi|256617686|ref|ZP_05474532.1| leucyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256761563|ref|ZP_05502143.1| leucyl-tRNA synthetase [Enterococcus faecalis T3] gi|256959928|ref|ZP_05564099.1| leucyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|256964366|ref|ZP_05568537.1| leucyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|257081058|ref|ZP_05575419.1| leucyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|257083719|ref|ZP_05578080.1| leucyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|257089228|ref|ZP_05583589.1| leucyl-tRNA synthetase [Enterococcus faecalis CH188] gi|257418403|ref|ZP_05595397.1| leucyl-tRNA synthetase [Enterococcus faecalis T11] gi|293383508|ref|ZP_06629419.1| leucine--tRNA ligase [Enterococcus faecalis R712] gi|293386666|ref|ZP_06631240.1| leucine--tRNA ligase [Enterococcus faecalis S613] gi|307271410|ref|ZP_07552684.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0855] gi|307284366|ref|ZP_07564531.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|307289503|ref|ZP_07569449.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|312901661|ref|ZP_07760931.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0470] gi|312905044|ref|ZP_07764169.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|312907126|ref|ZP_07766119.1| leucyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|312951828|ref|ZP_07770719.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|312979295|ref|ZP_07790993.1| leucyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|229306135|gb|EEN72131.1| leucyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|255966750|gb|EET97372.1| leucyl-tRNA synthetase [Enterococcus faecalis T2] gi|256597213|gb|EEU16389.1| leucyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256682814|gb|EEU22509.1| leucyl-tRNA synthetase [Enterococcus faecalis T3] gi|256950424|gb|EEU67056.1| leucyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|256954862|gb|EEU71494.1| leucyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|256989088|gb|EEU76390.1| leucyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|256991749|gb|EEU79051.1| leucyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|256998040|gb|EEU84560.1| leucyl-tRNA synthetase [Enterococcus faecalis CH188] gi|257160231|gb|EEU90191.1| leucyl-tRNA synthetase [Enterococcus faecalis T11] gi|291079142|gb|EFE16506.1| leucine--tRNA ligase [Enterococcus faecalis R712] gi|291083883|gb|EFE20846.1| leucine--tRNA ligase [Enterococcus faecalis S613] gi|306499521|gb|EFM68892.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|306503306|gb|EFM72558.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|306511905|gb|EFM80901.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0855] gi|310626903|gb|EFQ10186.1| leucyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|310630231|gb|EFQ13514.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|310631623|gb|EFQ14906.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|311287889|gb|EFQ66445.1| leucyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|311291272|gb|EFQ69828.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0470] gi|315145192|gb|EFT89208.1| leucyl-tRNA synthetase [Enterococcus faecalis TX2141] gi|315154255|gb|EFT98271.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0031] gi|315154872|gb|EFT98888.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0043] gi|315164608|gb|EFU08625.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1302] gi|315166992|gb|EFU11009.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1341] gi|315170867|gb|EFU14884.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1342] gi|315576576|gb|EFU88767.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0630] gi|327534387|gb|AEA93221.1| leucine--tRNA ligase [Enterococcus faecalis OG1RF] Length = 820 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +EK Y YP+ Q H+GH D+L+R R G +VL G D G + A Sbjct: 46 KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Y Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165 Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178 + + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219 Query: 179 YYE--SHPEFILPIER 192 E PE I ++R Sbjct: 220 DLELVDWPESIKDMQR 235 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 589 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353 EK+SKS GNV++P +V+ + G D LR + L IA ++G RV Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 649 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 + + G + R ++ +D + V + ++++ E+M N + A Sbjct: 650 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 692 Query: 414 LAQVISLVSEVDR 426 ++Q++ V+E ++ Sbjct: 693 ISQLMVFVNEANK 705 >gi|242823854|ref|XP_002488143.1| leucyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500] gi|218713064|gb|EED12489.1| leucyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500] Length = 1000 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 11/197 (5%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +R K YI + YP+ H+GH I+DVL+RF+R+ G DVL G D G AA Sbjct: 92 DRPKSYILSMFPYPSGTMHMGHLRVYTISDVLSRFYRMRGHDVLHPIGWDAFGLPAENAA 151 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119 GV + QN ++ +D + + + + + T RI + +KG Sbjct: 152 IERGVQPAKWTAQNIERMKEQLRSFGPGFDWERELMTCSPEFYKHTQRIFL-MLYEKGLA 210 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 Y+ Y D+ +++V A+G + + V+ ++ + +FFR++A++++LL Sbjct: 211 YQAEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEQLKLKQWFFRITAFKEELLKD 267 Query: 180 YES----HPEFILPIER 192 +S P+ +L ++R Sbjct: 268 LDSLSGGWPDRVLSMQR 284 >gi|315180853|gb|ADT87767.1| leucyl-tRNA synthetase [Vibrio furnissii NCTC 11218] Length = 858 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 110/260 (42%), Gaps = 30/260 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+ARF RL G +V+ G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVMQPIGWDAFGLPAENAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115 + +N ++ +L YD R TCR + K+ + Sbjct: 92 KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLYE 145 Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175 KG +YK S + D+ +++V DG + PV+ E +F +++AY + Sbjct: 146 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAYAQE 201 Query: 176 LLSYYESH---PEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228 LL ++ PE + ++R R+E + +K +KD + + + PD + Sbjct: 202 LLDDLDNLDGWPEMVKTMQRNWIGRSEGVE-LKFAVKDHAQDLEVY---TTRPDTLMGVT 257 Query: 229 YVWIDALTNYLTTTGYLDNP 248 YV I A + L T NP Sbjct: 258 YVGI-AAGHPLATEAAKSNP 276 >gi|315173068|gb|EFU17085.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1346] Length = 820 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +EK Y YP+ Q H+GH D+L+R R G +VL G D G + A Sbjct: 46 KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Y Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165 Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178 + + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219 Query: 179 YYE--SHPEFILPIER 192 E PE I ++R Sbjct: 220 DLELVDWPESIKDMQR 235 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 20/187 (10%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 589 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 EK+SKS GNV++P +V+ + G D LR + + ++++GL+ G Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLE---------GSR 640 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 + R +I+ + D M T +D + V + ++++ E+M N + A++Q++ Sbjct: 641 KFLDRVWRLIVDEEDKM--RDRITTINDGRLTKVYHQTVKKVTEDMANLHFNTAISQLMV 698 Query: 420 LVSEVDR 426 V+E ++ Sbjct: 699 FVNEANK 705 >gi|315148307|gb|EFT92323.1| leucyl-tRNA synthetase [Enterococcus faecalis TX4244] Length = 820 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +EK Y YP+ Q H+GH D+L+R R G +VL G D G + A Sbjct: 46 KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Y Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165 Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178 + + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219 Query: 179 YYE--SHPEFILPIER 192 E PE I ++R Sbjct: 220 DLELVDWPESIKDMQR 235 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGMVPTKEPFQKLYNQGMILGEN 589 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353 EK+SKS GNV++P +V+ + G D LR + L IA ++G RV Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 649 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 + + G + R ++ +D + V + ++++ E+M N + A Sbjct: 650 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 692 Query: 414 LAQVISLVSEVDR 426 ++Q++ V+E ++ Sbjct: 693 ISQLMVFVNEANK 705 >gi|255971258|ref|ZP_05421844.1| leucyl-tRNA synthetase [Enterococcus faecalis T1] gi|255962276|gb|EET94752.1| leucyl-tRNA synthetase [Enterococcus faecalis T1] Length = 820 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +EK Y YP+ Q H+GH D+L+R R G +VL G D G + A Sbjct: 46 KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Y Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165 Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178 + + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219 Query: 179 YYE--SHPEFILPIER 192 E PE I ++R Sbjct: 220 DLELVDWPESIKDMQR 235 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 589 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353 EK+SKS GNV++P +V+ + G D LR + L IA ++G RV Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 649 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 + + G + R ++ +D + V + ++++ E+M N + A Sbjct: 650 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 692 Query: 414 LAQVISLVSEVDR 426 ++Q++ V+E ++ Sbjct: 693 ISQLMVFVNEANK 705 >gi|300859685|ref|ZP_07105773.1| leucine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|300850503|gb|EFK78252.1| leucine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] Length = 804 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +EK Y YP+ Q H+GH D+L+R R G +VL G D G + A Sbjct: 30 KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 89 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Y Sbjct: 90 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 149 Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178 + + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 150 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 203 Query: 179 YYE--SHPEFILPIER 192 E PE I ++R Sbjct: 204 DLELVDWPESIKDMQR 219 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 514 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353 EK+SKS GNV++P +V+ + G D LR + L IA ++G RV Sbjct: 574 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 633 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 + + G + R ++ +D + V + ++++ E+M N + A Sbjct: 634 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 676 Query: 414 LAQVISLVSEVDR 426 ++Q++ V+E ++ Sbjct: 677 ISQLMVFVNEANK 689 >gi|119477447|ref|ZP_01617638.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] gi|119449373|gb|EAW30612.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] Length = 825 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 9/195 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E++K Y T YP+ H+GH I DV++R+ R+ G +VL G D G AA Sbjct: 31 EKDKYYCLTMFPYPSGNLHMGHVRNYSIGDVISRYQRMLGKNVLQPMGWDAFGLPAENAA 90 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + D N R+ L +YD + T + ++ + + ++ +KG +Y Sbjct: 91 VKHNTAPGKWTDSNIAYMRNQLKQLGFAYDWSKELATCKPDYYRWEQWFFTRLYEKGLVY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178 K + + DE +++V G + PV+ E +F +++ Y D+LL+ Sbjct: 151 KKTSAVNWCPEDETVLANEQVIDGCCWRC----DTPVERKEIPQWFIKITEYADQLLADL 206 Query: 179 -YYESHPEFILPIER 192 + PE + ++R Sbjct: 207 DQLDGWPEQVKTMQR 221 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 10/87 (11%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299 D A +W P D ++ G + H +Y F L++ + P ++ G +L Sbjct: 523 DADAANYWLPVDQYIGGIEHAILHLLYARFFHKLMRDEGLINCDEPF-DRLLCQGMVLKD 581 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALR 326 G K+SKS GN +DP E+IE+ G D++R Sbjct: 582 GTKMSKSKGNTVDPQEMIEQYGADSVR 608 >gi|261493583|ref|ZP_05990103.1| leucine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495421|ref|ZP_05991869.1| leucine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308926|gb|EEY10181.1| leucine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310765|gb|EEY11948.1| leucine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 861 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + + YP+ + H+GH I DV++R+ R+ G +VL G D G AA Sbjct: 32 KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N + +L SY D + T ++ + + ++ KG +YK Sbjct: 92 KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + DE +++V++G + PV+ E +F +++ Y ++LL+ + Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLNQLD 207 Query: 182 SHPEF 186 + P++ Sbjct: 208 NLPQW 212 >gi|257086155|ref|ZP_05580516.1| leucyl-tRNA synthetase [Enterococcus faecalis D6] gi|256994185|gb|EEU81487.1| leucyl-tRNA synthetase [Enterococcus faecalis D6] gi|315027603|gb|EFT39535.1| leucyl-tRNA synthetase [Enterococcus faecalis TX2137] Length = 820 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +EK Y YP+ Q H+GH D+L+R R G +VL G D G + A Sbjct: 46 KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Y Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165 Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178 + + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219 Query: 179 YYE--SHPEFILPIER 192 E PE I ++R Sbjct: 220 DLELVDWPESIKDMQR 235 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 589 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353 EK+SKS GNV++P +V+ + G D LR + L IA ++G RV Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 649 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 + + G + R ++ +D + V + ++++ E+M N + A Sbjct: 650 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 692 Query: 414 LAQVISLVSEVDR 426 ++Q++ V+E ++ Sbjct: 693 ISQLMVFVNEANK 705 >gi|229172908|ref|ZP_04300462.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus MM3] gi|228610653|gb|EEK67921.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus MM3] Length = 1033 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++ + G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDAKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I DV+AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|190150200|ref|YP_001968725.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|238692395|sp|B3H1L1|SYL_ACTP7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|189915331|gb|ACE61583.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 834 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 87/185 (47%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + + YP+ + H+GH I DV++R+ R+ G +VL G D G AA Sbjct: 32 KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N + +L SY D + T + ++ + + ++ KG +YK Sbjct: 92 KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRQEYYKWEQWFFTELYKKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + D +++V++G + PV+ E +F +++ Y ++LL++ + Sbjct: 152 KTSTVNWCPNDATVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLTHLD 207 Query: 182 SHPEF 186 + P++ Sbjct: 208 NLPQW 212 >gi|254779703|ref|YP_003057809.1| valyl-tRNA synthetase [Helicobacter pylori B38] gi|254001615|emb|CAX29717.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Helicobacter pylori B38] Length = 874 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 484 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 538 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN I N VS Sbjct: 539 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAVS 592 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 21/35 (60%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + D+L R+ R+DG L+ G D G Sbjct: 58 HIGHALTLSLQDILVRYKRMDGYKTLYQPGLDHAG 92 >gi|217032547|ref|ZP_03438037.1| hypothetical protein HPB128_172g10 [Helicobacter pylori B128] gi|298735844|ref|YP_003728369.1| valyl-tRNA synthetase [Helicobacter pylori B8] gi|216945752|gb|EEC24376.1| hypothetical protein HPB128_172g10 [Helicobacter pylori B128] gi|298355033|emb|CBI65905.1| valyl-tRNA synthetase [Helicobacter pylori B8] Length = 872 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN I N VS Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAVS 590 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 21/35 (60%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + D+L R+ R+DG L+ G D G Sbjct: 56 HIGHALTLSLQDILVRYKRMDGYKTLYQPGLDHAG 90 >gi|317012930|gb|ADU83538.1| valyl-tRNA synthetase [Helicobacter pylori Lithuania75] Length = 872 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN I N VS Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAVS 590 Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + D+LAR+ R+DG L+ G D G Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90 >gi|313818419|gb|EFS56133.1| leucyl-tRNA synthetase [Propionibacterium acnes HL046PA2] gi|314960145|gb|EFT04247.1| leucyl-tRNA synthetase [Propionibacterium acnes HL002PA2] gi|315085801|gb|EFT57777.1| leucyl-tRNA synthetase [Propionibacterium acnes HL002PA3] Length = 826 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE+ Y+ AYP+ H+GHA I DVLAR+ RL G DVL G D G AA Sbjct: 38 RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +D + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 +Y K ++ W D+ +++V G Q N QW +FR++ Y Sbjct: 154 LVYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R S + D D + T+ D ++ V R + +I E ++ Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684 Query: 408 QLIHRALAQVISLVSEVDRYFDA 430 + +A+++ LV+ + D+ Sbjct: 685 GRYNVVVARIMELVNATRKTIDS 707 >gi|229546656|ref|ZP_04435381.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|307276217|ref|ZP_07557347.1| leucyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|307296175|ref|ZP_07576005.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|229308223|gb|EEN74210.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|306496149|gb|EFM65729.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|306507129|gb|EFM76269.1| leucyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|315030502|gb|EFT42434.1| leucyl-tRNA synthetase [Enterococcus faecalis TX4000] gi|315159956|gb|EFU03973.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0312] Length = 820 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +EK Y YP+ Q H+GH D+L+R R G +VL G D G + A Sbjct: 46 KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Y Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165 Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178 + + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219 Query: 179 YYE--SHPEFILPIER 192 E PE I ++R Sbjct: 220 DLELVDWPESIKDMQR 235 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 589 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353 EK+SKS GNV++P +V+ + G D LR + L IA ++G RV Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 649 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 + + G + R ++ +D + V + ++++ E+M N + A Sbjct: 650 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 692 Query: 414 LAQVISLVSEVDR 426 ++Q++ V+E ++ Sbjct: 693 ISQLMVFVNEANK 705 >gi|308184894|ref|YP_003929027.1| valyl-tRNA synthetase [Helicobacter pylori SJM180] gi|308060814|gb|ADO02710.1| valyl-tRNA synthetase [Helicobacter pylori SJM180] Length = 872 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN I N VS Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAVS 590 Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + D+LAR+ R+DG L+ G D G Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90 >gi|256376783|ref|YP_003100443.1| methionine--tRNA ligase [Actinosynnema mirum DSM 43827] gi|255921086|gb|ACU36597.1| Methionine--tRNA ligase [Actinosynnema mirum DSM 43827] Length = 542 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 85/372 (22%), Positives = 148/372 (39%), Gaps = 48/372 (12%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 M + A N H+GH A + ADV AR+ + G V++TT TD+ + Sbjct: 1 MTTARPAVVIAATPTSNGDLHVGHLAGPYLSADVYARYLKATGRPVVYTTCTDDSQSYVV 60 Query: 60 KAAQNAGVTTKVFV----DQNSRNFRDMADVLD-------------ISYDDFIRTTEKRH 102 A G+ + V +Q SR+ ++ + Y + + Sbjct: 61 STAHRRGLAPEELVRTSTEQISRSLAAAGTLVPGLPPIDERYRRTVLDYLLELHAAGRFQ 120 Query: 103 HDTCRILWKKISDKGDIYKG--------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 T R+ + K + +Y G C SG E + + + D +Y Sbjct: 121 PRTVRLPYAKNAGV-FLYDGLVSGTCPVCLSGSCGGACENCGHPNNFDELIDPKYTIDPS 179 Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 +PV + E+ L Y+++L SYY S P + + + L D+ ++ Sbjct: 180 DPVVYREQRILVLPLEEYRERLSSYYASRTPRWRP-HAKQLIGELLARPLPDVPVTFPG- 237 Query: 215 DWGIK--IPDDPQYIMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPADLHVIGKDIL 268 WGI P+ P I+Y WI+A+ + +T + NP G+ + W A+ G +++ Sbjct: 238 SWGIPAPFPETPGQIVYPWIEAVPAAMYSTWWAATEQGNPPGAADELWRAE---SGAELV 294 Query: 269 RFHAI----YWPAF---LLSAN---LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318 FH +W +L A+ P + F +GEK S S G++I ++ Sbjct: 295 YFHGFDNVYHWGLVDLVMLMAHGDRYTTPDANVCNEFYDLEGEKFSTSRGHLIWGADLFA 354 Query: 319 EVGVDALRYFLV 330 EV D +R++L Sbjct: 355 EVPRDLVRFYLA 366 >gi|188518664|ref|ZP_03004101.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188997721|gb|EDU66818.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] Length = 874 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 20/258 (7%) Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSH 293 L TT + N D +++P L V G DIL F W + +++ + L +K V H Sbjct: 459 LLTTKWNSN-DQFFKRYFPTALMVTGMDILFF----WVSRMMNFSQYLVQKRPFKDVLIH 513 Query: 294 GFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 G I +G+K+SKSLGN IDP ++I E G+D +R F G+D + + L N Sbjct: 514 GLIRDAQGKKMSKSLGNGIDPFDIINEYGLDTMRLFFASSTTVGEDLNFSTERLG--ANW 571 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 + N I N+ ++ + I F + ++ I++ S++ E+ +NM + Sbjct: 572 NYLNKIWNIAKYIENLDEINESFSIQDVHEFCDVNKWIIAELSKLSVEMNKNMDKYNLVV 631 Query: 413 ALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKL 469 A + + + Y + K T + T+ Y V Q+ I+L F P + Sbjct: 632 ATKDLYDFIWNTFASNYLEYTKVLLQDTTFKNETIKTIRY----VFNQILIMLHPFAPNI 687 Query: 470 ANKIFDILFVADENRCFQ 487 + +I+ L +E+ Q Sbjct: 688 SEEIWLNLNQTNESILLQ 705 Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 21/35 (60%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHAY+ + D+L R+ +L G D GTD G Sbjct: 53 HIGHAYDFTLPDILMRYKKLQGYDAFIVPGTDHAG 87 >gi|29375390|ref|NP_814544.1| leucyl-tRNA synthetase [Enterococcus faecalis V583] gi|48428540|sp|Q837N5|SYL_ENTFA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|29342850|gb|AAO80614.1| leucyl-tRNA synthetase [Enterococcus faecalis V583] Length = 804 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +EK Y YP+ Q H+GH D+L+R R G +VL G D G + A Sbjct: 30 KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 89 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Y Sbjct: 90 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 149 Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178 + + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 150 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 203 Query: 179 YYE--SHPEFILPIER 192 E PE I ++R Sbjct: 204 DLELVDWPESIKDMQR 219 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 514 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353 EK+SKS GNV++P +V+ + G D LR + L IA ++G RV Sbjct: 574 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 633 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 + + G + R ++ +D + V + ++++ E+M N + A Sbjct: 634 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 676 Query: 414 LAQVISLVSEVDR 426 ++Q++ V+E ++ Sbjct: 677 ISQLMVFVNEANK 689 >gi|261405376|ref|YP_003241617.1| valyl-tRNA synthetase [Paenibacillus sp. Y412MC10] gi|261281839|gb|ACX63810.1| valyl-tRNA synthetase [Paenibacillus sp. Y412MC10] Length = 889 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 8/179 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANL 284 ++ W + +T G+ D +++P + V G DI+ F + + + + Sbjct: 457 VLDTWFSSALWPFSTMGWPDLDSEDFKRYYPTSVLVTGYDIIPFWVSRMIFQGLEFTGQM 516 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG + +G K+SKSLGN IDP+EVIE+ G DA+RY + G+D + Sbjct: 517 PF-KDTLIHGLVRDSEGRKMSKSLGNGIDPLEVIEQYGADAMRYMISTGSTPGQDLRFRW 575 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEI 401 + +++ N AN I N SR M L+ + I G +D IL + ++I Sbjct: 576 ERVEQARN--FANKIWN-ASRFALMNLEGFTAADIDISGELGTADRWILHRLNETSRDI 631 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 21/154 (13%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-------- 68 HIGHA + + D+L R R+ G D L+ G+D G K+ + + GVT Sbjct: 60 HIGHALDFTLQDILIRVKRMQGYDALWLPGSDHAGIATQTKVEQKLREEGVTRYDLGREK 119 Query: 69 --TKV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRILWKKISDKGDIYK 121 KV + D + RD + +S D+ R T ++ + R ++ K+ DKG IY+ Sbjct: 120 FLEKVWEWKDLYANTIRDQWSKIGLSL-DYSRERFTLDEGLSEAVREVFVKLYDKGLIYR 178 Query: 122 GCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 G + +D EV YK +G Y+ Q+ Sbjct: 179 GKRIINWDPAARTALSDIEVEYKEVNGHLYHLQY 212 >gi|108563517|ref|YP_627833.1| valyl-tRNA synthetase [Helicobacter pylori HPAG1] gi|107837290|gb|ABF85159.1| valyl-tRNA synthetase [Helicobacter pylori HPAG1] Length = 874 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 484 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 538 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN I N VS Sbjct: 539 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAVS 592 Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + D+LAR+ R+DG L+ G D G Sbjct: 58 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 92 >gi|315080792|gb|EFT52768.1| leucyl-tRNA synthetase [Propionibacterium acnes HL078PA1] Length = 826 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE+ Y+ AYP+ H+GHA I DVLAR+ RL GLDVL G D G AA Sbjct: 38 RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGLDVLHPVGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +D + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y K ++ W D+ +++V G Q N QW +FR++ Y Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R S + D D + T+ D ++ V R + +I E ++ Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684 Query: 408 QLIHRALAQVISLVSEVDRYFDA 430 + +A+++ LV+ + D+ Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707 >gi|256957334|ref|ZP_05561505.1| leucyl-tRNA synthetase [Enterococcus faecalis DS5] gi|257077670|ref|ZP_05572031.1| leucyl-tRNA synthetase [Enterococcus faecalis JH1] gi|257421052|ref|ZP_05598042.1| leucyl-tRNA synthetase [Enterococcus faecalis X98] gi|294779827|ref|ZP_06745213.1| leucine--tRNA ligase [Enterococcus faecalis PC1.1] gi|307270140|ref|ZP_07551457.1| leucyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|256947830|gb|EEU64462.1| leucyl-tRNA synthetase [Enterococcus faecalis DS5] gi|256985700|gb|EEU73002.1| leucyl-tRNA synthetase [Enterococcus faecalis JH1] gi|257162876|gb|EEU92836.1| leucyl-tRNA synthetase [Enterococcus faecalis X98] gi|294453101|gb|EFG21517.1| leucine--tRNA ligase [Enterococcus faecalis PC1.1] gi|295113985|emb|CBL32622.1| leucyl-tRNA synthetase [Enterococcus sp. 7L76] gi|306513509|gb|EFM82124.1| leucyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|315035310|gb|EFT47242.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0027] gi|329577672|gb|EGG59101.1| leucine--tRNA ligase [Enterococcus faecalis TX1467] Length = 804 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +EK Y YP+ Q H+GH D+L+R R G +VL G D G + A Sbjct: 30 KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 89 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Y Sbjct: 90 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 149 Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178 + + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 150 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 203 Query: 179 YYE--SHPEFILPIER 192 E PE I ++R Sbjct: 204 DLELVDWPESIKDMQR 219 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 514 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353 EK+SKS GNV++P +V+ + G D LR + L IA ++G RV Sbjct: 574 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 633 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 + + G + R ++ +D + V + ++++ E+M N + A Sbjct: 634 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 676 Query: 414 LAQVISLVSEVDR 426 ++Q++ V+E ++ Sbjct: 677 ISQLMVFVNEANK 689 >gi|219558447|ref|ZP_03537523.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T17] Length = 757 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 34/263 (12%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280 DP ++ W + +T G+ D KF+P + V G DIL +W A ++ Sbjct: 449 DPD-VLDTWFSSALWPFSTLGWPDK-TAELEKFYPTSVLVTGYDIL----FFWVARMMMF 502 Query: 281 ------SANLPLPKK---------VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 A + L + VF HG I G K+SKS GNVIDP++ +E G DA Sbjct: 503 GTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADA 562 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LR+ L R + G D +D ++ N G + +++ +P+P T Sbjct: 563 LRFTLARGASPGGDLAVSEDAVRASRNF----GTKLFNATRYALLNGAAPAPLPSPNELT 618 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 ++D IL V E+ RA + D + D W L+ A Sbjct: 619 DADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFA--WDEFCD----WYLELAKTQLA 672 Query: 445 STVLYVTVEVIRQLAILLQAFVP 467 + + T + L LL+ P Sbjct: 673 QGLTHTTAVLAAGLDTLLRLLHP 695 Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 26/124 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA---KAAQNAGVTT 69 H+GHA E + D L R R+ G +VL+ GTD G Q++A K ++ G Sbjct: 60 HMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSVVEQQLAVDGKTKEDLG--R 117 Query: 70 KVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 ++FVD+ R + D +D S D F T ++ R ++K++ D G Sbjct: 118 ELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLYDAGL 175 Query: 119 IYKG 122 IY+ Sbjct: 176 IYRA 179 >gi|195953150|ref|YP_002121440.1| isoleucyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] gi|259511505|sp|B4U8K1|SYI_HYDS0 RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|195932762|gb|ACG57462.1| isoleucyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] Length = 937 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 36/266 (13%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 I+ VW D+ +++ + P G + AD+++ G D R F A + Sbjct: 555 ILDVWFDSGSSHASVL----RPRGIEK----ADVYLEGSDQHRGWFQASLLESIASYGEA 606 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-----IACGKD 338 P K V +HGF + KG K+SKS GNVI P+E+I+E G D LR +++ E I GK Sbjct: 607 PF-KSVVTHGFTVDEKGHKMSKSQGNVISPLEIIKEYGADILRLWVISEDYTEDIKLGKS 665 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398 K++ L +GNL + P D + + S+V Sbjct: 666 ILKRLAEDYKKIRNTLRYCLGNLYDFKYEFSI--------APDKLHHFDRYMYAYASKVF 717 Query: 399 QEIRENMQNQLIHRALAQVISLVSEVD---RYFDAQKP--WELKKTNPDR--ASTVLYVT 451 +E+ +N HR +++ VS +D YFD K + K + +R A TVLY Sbjct: 718 EELFSFYKNYQYHRFYHRLMEFVS-IDLSALYFDVLKDRLYMYKSGSFERLSAQTVLYF- 775 Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477 +++ L ILL + A + + + Sbjct: 776 --LLKNLTILLSPVLSFTAEETYSYM 799 Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 6/88 (6%) Query: 15 YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74 Y N HIGHA I+ D++ + ++G DV + G D HG I + + K+ + Sbjct: 56 YANGNIHIGHALNKILKDIICKVALIEGFDVDYKPGWDCHGLPIEQQVEKELKAKKINKE 115 Query: 75 QNSRN-FRDM-----ADVLDISYDDFIR 96 ++ FR + + + I ++F+R Sbjct: 116 SMPKDEFRRLCREYASKFVSIQKEEFLR 143 >gi|229196425|ref|ZP_04323172.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus m1293] gi|228587062|gb|EEK45133.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus m1293] Length = 1033 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++E+ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIATLVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I DV+AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRTIKDVVARYKTMSGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|33596600|ref|NP_884243.1| isoleucyl-tRNA synthetase [Bordetella parapertussis 12822] gi|81427187|sp|Q7W8Z2|SYI_BORPA RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|33573301|emb|CAE37284.1| isoleucyl-tRNA synthetase [Bordetella parapertussis] Length = 953 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 13/202 (6%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284 VW D+ + + T G D GS WPADL++ G D R FH+ +L + Sbjct: 546 VWFDSGSTHATVLGGKDGVLGSSHGAELAWPADLYLEGSDQHRGWFHSSLLTGCMLYGHP 605 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K + +HGF++ +G K+SKS+GNVI P +V + +G + LR ++ G+ D+ Sbjct: 606 PY-KGLLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGELSISDE 664 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQEI 401 + KRV + I N + R + + D+D G G E D L++ +++ E+ Sbjct: 665 --ILKRV-VESYRRIRNTL-RFLLANVADFDAVGQAVPYGELFEIDRYALAMTAQMQAEV 720 Query: 402 RENMQNQLIHRALAQVISLVSE 423 + + + H A++++ + SE Sbjct: 721 QGHYERYDFHPAVSRLQTFCSE 742 Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 16/135 (11%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------ 55 + R + + Y N HIGHA I+ D++ + + G D + G D HG Sbjct: 45 RGRPRFVLHDGPPYANGDIHIGHAVNKILKDIIVKSRNMAGYDAHYVPGWDCHGMPIEIQ 104 Query: 56 --QKIAKAAQNAGVTTKVF------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 +K K V +K +D+ ++F+ + VL ++ ++ D R Sbjct: 105 IEKKYGKHLPVTEVQSKARAYALEQIDRQRKDFKRLG-VLGDWHNPYLTMNFSNEADEIR 163 Query: 108 ILWKKISDKGDIYKG 122 +L +I +KG +++G Sbjct: 164 VL-GRILEKGYVFRG 177 >gi|322376122|ref|ZP_08050631.1| valine--tRNA ligase [Streptococcus sp. C300] gi|321278890|gb|EFX55934.1| valine--tRNA ligase [Streptococcus sp. C300] Length = 883 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDMDSADFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ + E + +V+ + Sbjct: 559 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEQATANVEKVVNK 603 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ ++ I L + I V+E Sbjct: 604 EAGNVTDRWILHNLNETIGKVTE 626 Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+D+ + M +D S + F T ++ R Sbjct: 100 GEGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|210135312|ref|YP_002301751.1| valyl-tRNA synthetase [Helicobacter pylori P12] gi|210133280|gb|ACJ08271.1| valyl-tRNA synthetase [Helicobacter pylori P12] Length = 872 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN I N VS Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAVS 590 Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + D+LAR+ R+DG L+ G D G Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90 >gi|171920754|ref|ZP_02931957.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185179054|ref|ZP_02964793.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024300|ref|ZP_02996988.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188524452|ref|ZP_03004463.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867607|ref|ZP_03079609.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273678|ref|ZP_03206213.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554355|ref|YP_002284667.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225551246|ref|ZP_03772192.1| valine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903504|gb|EDT49793.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209039|gb|EDU06082.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018974|gb|EDU57014.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|195659607|gb|EDX52987.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660664|gb|EDX53919.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249706|gb|EDY74487.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541856|gb|ACI60085.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379061|gb|EEH01426.1| valine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 874 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 20/258 (7%) Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSH 293 L TT + N D +++P L V G DIL F W + +++ + L +K V H Sbjct: 459 LLTTKWNSN-DQFFKRYFPTALMVTGMDILFF----WVSRMMNFSQYLVQKRPFKDVLIH 513 Query: 294 GFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352 G I +G+K+SKSLGN IDP ++I E G+D +R F G+D + + L N Sbjct: 514 GLIRDAQGKKMSKSLGNGIDPFDIINEYGLDTMRLFFASSTTVGEDLNFSTERLG--ANW 571 Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 + N I N+ ++ + I F + ++ I++ S++ E+ +NM + Sbjct: 572 NYLNKIWNIAKYIENLDEINESFSIQDVHEFCDVNKWIIAELSKLSVEMNKNMDKYNLVV 631 Query: 413 ALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKL 469 A + + + Y + K T + T+ Y V Q+ I+L F P + Sbjct: 632 ATKDLYDFIWNTFASNYLEYTKVLLQDTTFKNETIKTIRY----VFNQILIMLHPFAPNI 687 Query: 470 ANKIFDILFVADENRCFQ 487 + +I+ L +E+ Q Sbjct: 688 SEEIWLNLNQTNESILLQ 705 Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 21/35 (60%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHAY+ + D+L R+ +L G D GTD G Sbjct: 53 HIGHAYDFTLPDILMRYKKLQGYDAFIVPGTDHAG 87 >gi|301165609|emb|CBW25180.1| valyl-tRNA synthetase [Bacteriovorax marinus SJ] Length = 888 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 92/373 (24%), Positives = 153/373 (41%), Gaps = 71/373 (19%) Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219 M + +F + + L E+ P + N S+++ K+ LSR+ + WG + Sbjct: 361 MVSKQWFLNVQDMSKQALECVENGETNFFPKQWENTYFSWLREP-KNWCLSRQLW-WGHQ 418 Query: 220 IP-----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDG 250 IP DP ++ W + ++T G+ NP+ Sbjct: 419 IPVFNCSDCSHQWASEVDETKCSKCSSENVTQDPD-VLDTWFSSGLWPMSTLGW-PNPER 476 Query: 251 SKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFS----HGFILHK-G 300 K KF+P V G DI+ F W A ++ +L + +K FS H + K G Sbjct: 477 MKERGYDKFFPTTCLVTGFDIIFF----WVARMMMMSLKVTGEKPFSDIYIHALVRDKLG 532 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKSLGN +DP+E +EE G DA R+ L G + + D + + N I N Sbjct: 533 RKMSKSLGNGLDPLETVEEYGADAFRFTLA--AGSGYNRGLNLDPERIAGYRNFINKIWN 590 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 R +S L+ G I P + ++ I+S + V + + ++M+ + A + + Sbjct: 591 AF-RFISPFLE--KGDITLPKNLDQQEKWIISELNEVTKVMNDSMEEYRFDDSCAAIYAF 647 Query: 421 VSEVDRYFDAQKPW--ELKKT--------NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 V +D W EL K R STVL T RQ+ LL P + Sbjct: 648 V------YDKFCSWFIELSKNILHGEDQEAAQRRSTVLKYT---FRQIVTLLHPITPFIT 698 Query: 471 NKIFDILFVADEN 483 +++ L ++E+ Sbjct: 699 EELWSYLKDSEED 711 >gi|257873265|ref|ZP_05652918.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257807429|gb|EEV36251.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC10] Length = 804 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%) Query: 3 EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++ K Y YP+ Q H+GH D+L+RF R G +VL G D G + Sbjct: 29 DKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRFKRSQGYNVLHPMGWDAFGLPAEQY 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Sbjct: 89 ALDTGNDPAEFTKKNIETFRRQINALGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 148 Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177 Y+ W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 149 YEAEVPVNWVPELGTVIANEEVIDGKSERGGYDVIRKPMRQWM------LKITAYADRLL 202 Query: 178 SYYES--HPEFILPIER 192 E PE I ++R Sbjct: 203 DDLEEVDWPESIKEMQR 219 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 20/185 (10%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+F+ G IL Sbjct: 514 DYDKLKRWMPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFEKLFNQGMILGEN 573 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 EK+SKS GNV++P +VI + G D LR + + ++++GL+ G Sbjct: 574 NEKMSKSRGNVVNPDDVINQYGADTLRLYEMFMGPLDASIAWNENGLE---------GSR 624 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 + R +I+ + M F +D + V + ++++ E+ + + A++Q++ Sbjct: 625 KFLDRVWRLIVDENGKMRDRITTF--NDGKLSKVYHQTVKKVTEDFEQLHFNTAISQLMV 682 Query: 420 LVSEV 424 V+E Sbjct: 683 FVNEA 687 >gi|188527937|ref|YP_001910624.1| valyl-tRNA synthetase [Helicobacter pylori Shi470] gi|188144177|gb|ACD48594.1| valyl-tRNA synthetase [Helicobacter pylori Shi470] Length = 872 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN I N VS Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCAMGRDIKLSTTHLEN--NKNFANKIFNAVS 590 Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + D+LAR+ R+DG L+ G D G Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90 >gi|15606596|ref|NP_213976.1| valyl-tRNA synthetase [Aquifex aeolicus VF5] gi|6226195|sp|O67411|SYV_AQUAE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|2983819|gb|AAC07375.1| valyl-tRNA synthetase [Aquifex aeolicus VF5] Length = 1165 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 36/247 (14%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILHK-GEKISKSLG 308 +P DL V G DI+ F W A ++ K V+ H + K G K+SK++G Sbjct: 751 LYPTDLLVTGFDIIFF----WVARMIMMGTHFMKDIPFYDVYVHALVRDKYGRKMSKTIG 806 Query: 309 NVIDPIEVIEEVGVDALRYFLV------REIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 NVIDP+++IE G DALR+ L R+I ++ F +G K AN I N Sbjct: 807 NVIDPLDIIERYGADALRFTLAILTVQGRDIKLAEEKF---EGYK-----HFANKIWNAA 858 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422 + +D+ IP D+ I++ + +E+ + ++N +A + Sbjct: 859 RYVLMNTPEDFIARIPYMAPLKPEDKWIITKLNETAEEVNKALENYQYSQAAHAIYEFFW 918 Query: 423 E--VDRYFDAQKPWELKKTNPDRA----------STVLYVTVEVIRQLAILLQAFVPKLA 470 D Y + K KK D +T LY V+ + +L F+P + Sbjct: 919 SDYCDWYIEFTKERIYKKAPEDNEEEKAKVENERTTALYTLHYVLEKALRILHPFMPYIT 978 Query: 471 NKIFDIL 477 +++ L Sbjct: 979 EELWHKL 985 >gi|324326229|gb|ADY21489.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 1033 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++E+ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYAKLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I DV+AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|257877008|ref|ZP_05656661.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC20] gi|257811174|gb|EEV39994.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC20] Length = 804 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%) Query: 3 EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++ K Y YP+ Q H+GH D+L+RF R G +VL G D G + Sbjct: 29 DKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRFKRSQGYNVLHPMGWDAFGLPAEQY 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Sbjct: 89 ALDTGNDPAEFTKKNIETFRRQINALGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 148 Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177 Y+ W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 149 YEAEVPVNWVPELGTVIANEEVIDGKSERGGYDVIRKPMRQWM------LKITAYADRLL 202 Query: 178 SYYES--HPEFILPIER 192 E PE I ++R Sbjct: 203 DDLEEVDWPESIKEMQR 219 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 20/185 (10%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+F+ G IL Sbjct: 514 DYDKLKRWMPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFEKLFNQGMILGEN 573 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 EK+SKS GNV++P +VI + G D LR + + ++++GL+ G Sbjct: 574 NEKMSKSRGNVVNPDDVINQYGADTLRLYEMFMGPLDASIAWNENGLE---------GSR 624 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 + R +I+ + M F +D + V + ++++ E+ + + A++Q++ Sbjct: 625 KFLDRVWRLIVDENGKMRDRITTF--NDGKLSKVYHQTVKKVTEDFEQLHFNTAISQLMV 682 Query: 420 LVSEV 424 V+E Sbjct: 683 FVNEA 687 >gi|219122368|ref|XP_002181518.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406794|gb|EEC46732.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 1035 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 30/214 (14%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSA 282 ++ W + T G+ N +G K +F+PA G DI+ F W A ++ Sbjct: 566 VLDTWFSSGLWPFATVGWPQN-EGVKGSDFDRFFPASCLETGYDIIFF----WVARMVMM 620 Query: 283 NLPLPKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 + L K V+ HG + G K+SK+ GNV+DP++ + E G D+LRY LV + G Sbjct: 621 GIELTGKSPFSVVYLHGLVRAADGSKMSKTKGNVLDPLDTVAEFGADSLRYSLVTGVTPG 680 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396 +D + + K N + AN + N LKD ++ D + L+V Sbjct: 681 QDIPLNME--KIEANRNFANKLWNCCKFVTGNALKD----------LSDEDLASLAVSGP 728 Query: 397 VLQEIRENM---QNQLIHRALAQVISLVSEVDRY 427 + QE +++ + +I + V S+ ++++Y Sbjct: 729 IEQEEFDSLLLPERYIISKCHTLVASVTQDIEKY 762 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 19/35 (54%), Positives = 24/35 (68%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 H+GHA + + DVLARFHR+ G VL+ GTD G Sbjct: 161 HMGHAIFVALQDVLARFHRMRGRPVLWLPGTDHAG 195 >gi|126436140|ref|YP_001071831.1| valyl-tRNA synthetase [Mycobacterium sp. JLS] gi|126235940|gb|ABN99340.1| valyl-tRNA synthetase [Mycobacterium sp. JLS] Length = 883 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 92/210 (43%), Gaps = 30/210 (14%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW------- 275 DP ++ W + +T G+ D AKF+P + V G DIL F Sbjct: 449 DPD-VLDTWFSSALWPFSTMGWPDRTP-ELAKFYPTTVLVTGYDILFFWVARMMMFGTFV 506 Query: 276 ---PAFLL----SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRY 327 PA L +A++P + VF HG I + G K+SKS GN IDP++ +E G DALR+ Sbjct: 507 ADDPALTLDGQRTADVPF-ENVFLHGLIRDEHGRKMSKSRGNGIDPLDWVETFGADALRF 565 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP----GAF 383 L R + G D +D R + + A + N +R M +G P P A Sbjct: 566 TLARGASPGGDLAIGED--HARASRNFATKLFN-ATRFALM-----NGAAPAPLPDVAAL 617 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRA 413 T++D IL V E+ + RA Sbjct: 618 TDADRWILGRLEEVRAEVDAAFEAYEFSRA 647 Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 22/122 (18%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK------V 71 H+GHA + + D L R R+ G +VL+ G D G Q + + TK + Sbjct: 60 HMGHALDHTLMDALTRRKRMQGFEVLWLPGMDHAGIATQTLVEKQLAVDGKTKEDFGREL 119 Query: 72 FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 F+D+ R + D +D S D F T + R ++KK+ D G IY Sbjct: 120 FIDKVWDWKRESGGTIGAQMRRLGDGVDWSRDRF--TMDDGLSRAVRTIFKKLYDAGLIY 177 Query: 121 KG 122 + Sbjct: 178 QA 179 >gi|320157153|ref|YP_004189532.1| leucyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] gi|319932465|gb|ADV87329.1| leucyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] Length = 857 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 17/218 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++RF RL G +V+ G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N ++ +L YD +F T + ++ + + K+ +KG +Y Sbjct: 92 KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177 K S + D+ +++V DG + PV+ E +F +++ Y +L L Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206 Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSL 209 E PE + ++R R+E + F G +DL + Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEV 244 >gi|27363751|ref|NP_759279.1| leucyl-tRNA synthetase [Vibrio vulnificus CMCP6] gi|29337023|sp|Q8DFE2|SYL_VIBVU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|27359867|gb|AAO08806.1| leucyl-tRNA synthetase [Vibrio vulnificus CMCP6] Length = 857 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 17/218 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++RF RL G +V+ G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N ++ +L YD +F T + ++ + + K+ +KG +Y Sbjct: 92 KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177 K S + D+ +++V DG + PV+ E +F +++ Y +L L Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206 Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSL 209 E PE + ++R R+E + F G +DL + Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEV 244 >gi|317127808|ref|YP_004094090.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] gi|315472756|gb|ADU29359.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] Length = 1030 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 116/229 (50%), Gaps = 15/229 (6%) Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310 K +PAD+ G D R F+++ + L + P K+V S G IL + G K+SKS GNV Sbjct: 540 KQFPADVIAEGVDQTRGWFYSLLTVSSLFTGKAPY-KRVLSLGHILDEDGRKMSKSKGNV 598 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 IDPI++++ G DALR+ L+ + A + + ++ + + + L + + ++ S + Sbjct: 599 IDPIDLVKNYGADALRWALLADSAPWNNKRFSEN-VVSQAKSKLVDTLNHV--HSFYTLY 655 Query: 371 KDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427 + DG P G + D+ +LS + V + ++E++ N ++ LV +V + Sbjct: 656 AEIDGFDPNKHEQGERSLLDKWVLSRLNTVTKNVKEHLDNYDFTAGAREISLLVDQVSNW 715 Query: 428 F---DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 + ++ W + N D+ + + +V+ +++ LL F P +A I Sbjct: 716 YIRRSRERFWS-EGLNDDKLA-AYHTLFKVLVRISRLLAPFTPFIAEDI 762 >gi|315645746|ref|ZP_07898870.1| valyl-tRNA synthetase [Paenibacillus vortex V453] gi|315279224|gb|EFU42534.1| valyl-tRNA synthetase [Paenibacillus vortex V453] Length = 889 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 8/179 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANL 284 ++ W + +T G+ D +++P ++ V G DI+ F + + + + Sbjct: 457 VLDTWFSSALWPFSTMGWPDLDSEDFKRYYPTNVLVTGYDIIPFWVSRMIFQGLEFTDQM 516 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG + +G K+SKSLGN IDP+EVIE+ G DA+RY + G+D + Sbjct: 517 PF-KDTLIHGLVRDSEGRKMSKSLGNGIDPLEVIEQYGADAMRYMISTGSTPGQDLRFRW 575 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEI 401 + +++ N AN I N SR M L+ + I G +D IL + ++I Sbjct: 576 ERVEQARN--FANKIWN-ASRFALMNLEGFTAADIDISGELGTADRWILHRLNETSRDI 631 Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 21/154 (13%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-------- 68 HIGHA + + D+L R R+ G D L+ G+D G K+ + + GVT Sbjct: 60 HIGHALDFTLQDILIRVKRMQGYDALWLPGSDHAGIATQTKVEQKLREEGVTRYDLGREK 119 Query: 69 --TKV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRILWKKISDKGDIYK 121 KV + D + RD + +S D+ R T ++ + R ++ K+ DKG IY+ Sbjct: 120 FLEKVWEWKDLYANTIRDQWSKIGLSL-DYSRERFTLDEGLSEAVREVFVKLYDKGLIYR 178 Query: 122 GCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 G + +D EV YK +G Y+ Q+ Sbjct: 179 GKRIINWDPAARTALSDIEVEYKEVNGHLYHLQY 212 >gi|307263538|ref|ZP_07545153.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306871181|gb|EFN02910.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 861 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 87/185 (47%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + + YP+ + H+GH I DV++R+ R+ G +VL G D G AA Sbjct: 32 KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N + +L SY D + T + ++ + + ++ KG +YK Sbjct: 92 KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRQEYYKWEQWFFTELYKKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + D +++V++G + PV+ E +F +++ Y ++LL++ + Sbjct: 152 KTSTVNWCPNDATVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLTHLD 207 Query: 182 SHPEF 186 + P++ Sbjct: 208 NLPQW 212 >gi|293606194|ref|ZP_06688557.1| isoleucine--tRNA ligase [Achromobacter piechaudii ATCC 43553] gi|292815341|gb|EFF74459.1| isoleucine--tRNA ligase [Achromobacter piechaudii ATCC 43553] Length = 953 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 13/202 (6%) Query: 230 VWIDALTNYLTTTGYLDNP-DGSKAK--FWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 VW D+ + + T G D GS WPADL++ G D R FH+ +L Sbjct: 546 VWFDSGSTHATVLGGKDGDFAGSHGAELGWPADLYLEGSDQHRGWFHSSLLTGCMLYGQP 605 Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K + +HGF++ +G K+SKS+GNVI P +V + +G + LR ++ G+ D+ Sbjct: 606 PY-KALLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGELSISDE 664 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEI 401 + KRV + I N + R + + D+D + G E D L++ +++ E+ Sbjct: 665 --ILKRV-VEGYRRIRNTL-RFLLANVADFDAVSQAEPYGELFEIDRYALAMTAQMQSEV 720 Query: 402 RENMQNQLIHRALAQVISLVSE 423 + N + H A++++ + SE Sbjct: 721 QANYERYDFHPAVSRLQTFCSE 742 Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust. Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 16/135 (11%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------ 55 + R + + Y N HIGHA I+ D++ + + G D + G D HG Sbjct: 45 RGRPRFVLHDGPPYANGDIHIGHAVNKILKDIIVKSRNMAGYDAHYVPGWDCHGMPIEIQ 104 Query: 56 --QKIAKAAQNAGVTTKVF------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 +K K A V +K +D+ ++F+ + VL ++ D R Sbjct: 105 IEKKYGKHLPVAEVQSKARAYALEQIDRQRKDFKRLG-VLGEWDRPYMTMNFSNEADEIR 163 Query: 108 ILWKKISDKGDIYKG 122 L +I DKG +++G Sbjct: 164 AL-GRILDKGYVFRG 177 >gi|260893645|ref|YP_003239742.1| leucyl-tRNA synthetase [Ammonifex degensii KC4] gi|260865786|gb|ACX52892.1| leucyl-tRNA synthetase [Ammonifex degensii KC4] Length = 824 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 52/238 (21%), Positives = 106/238 (44%), Gaps = 26/238 (10%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299 D +K +W P D ++ G + H +Y F L+S + P + + G +L Sbjct: 520 DKTKVDYWLPVDQYIGGVEHAILHLLYSRFFTKFLYDIGLVSCDEPF-TNLLTQGMVLKD 578 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKS GN++ P E+IE G D R F++ +D + +G++ A N + Sbjct: 579 GAKMSKSKGNIVSPEEIIEHYGADTTRLFILFAAPPERDLEWSDEGVEG--CARFLNRVW 636 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 LV + ++ G + + + + + R ++ + +++ ++ A++ ++ Sbjct: 637 RLVRSLIPVV----QGAGEPAESLSPPNRELRRLTHRTIERVTRDIEEFGLNTAVSAIME 692 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + RY + +P E R L E + L +LL F P +A ++++ L Sbjct: 693 FTNGLARYCEEVRPEE-------RDPGTLR---EAVETLILLLAPFAPYMAEELWEQL 740 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 73/180 (40%), Gaps = 8/180 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 +++ K Y YP+ + H+GH I DV+ARF R+ G VL G D G A Sbjct: 30 EDKPKYYCLEMFPYPSGKLHMGHVRNYAIGDVVARFKRMQGYSVLHPMGWDAFGLPAENA 89 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A G+ + QN R+ L SYD I T ++ + L+ + +G Sbjct: 90 AIKHGIHPHDWTWQNISFMREQLKQLGFSYDWHREIATCHPDYYRWTQWLFLQFFHRGLA 149 Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 Y K W N+ V G PV E E +F R++AY ++LL Sbjct: 150 YRKKAPVNWCPSCATVLANEQVV-----GGVCERCKTPVVPRELEQWFLRITAYAERLLQ 204 >gi|317177901|dbj|BAJ55690.1| valyl-tRNA synthetase [Helicobacter pylori F16] Length = 872 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN I N VS Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTAHLEN--NKNFANKIFNAVS 590 Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75 HIGHA + + D+LAR+ R+DG L+ G D G A QN V K +DQ Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG----IATQN--VVEKQLLDQ 104 >gi|108800524|ref|YP_640721.1| valyl-tRNA synthetase [Mycobacterium sp. MCS] gi|119869663|ref|YP_939615.1| valyl-tRNA synthetase [Mycobacterium sp. KMS] gi|108770943|gb|ABG09665.1| valyl-tRNA synthetase [Mycobacterium sp. MCS] gi|119695752|gb|ABL92825.1| valyl-tRNA synthetase [Mycobacterium sp. KMS] Length = 883 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 92/210 (43%), Gaps = 30/210 (14%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW------- 275 DP ++ W + +T G+ D AKF+P + V G DIL F Sbjct: 449 DPD-VLDTWFSSALWPFSTMGWPDRTP-ELAKFYPTTVLVTGYDILFFWVARMMMFGTFV 506 Query: 276 ---PAFLL----SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRY 327 PA L +A++P + VF HG I + G K+SKS GN IDP++ +E G DALR+ Sbjct: 507 ADDPALTLDGQRTADVPF-ENVFLHGLIRDEHGRKMSKSRGNGIDPLDWVETFGADALRF 565 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP----GAF 383 L R + G D +D R + + A + N +R M +G P P A Sbjct: 566 TLARGASPGGDLAIGED--HARASRNFATKLFN-ATRFALM-----NGAAPAPLPDVAAL 617 Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRA 413 T++D IL V E+ + RA Sbjct: 618 TDADRWILGRLEEVRAEVDAAFEAYEFSRA 647 Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 22/122 (18%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK------V 71 H+GHA + + D L R R+ G +VL+ G D G Q + + TK + Sbjct: 60 HMGHALDHTLMDALTRRKRMQGFEVLWLPGMDHAGIATQTLVEKQLAVDGKTKEDFGREL 119 Query: 72 FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 F+D+ R + D +D S D F T + R ++KK+ D G IY Sbjct: 120 FIDKVWDWKRESGGTIGAQMRRLGDGVDWSRDRF--TMDDGLSRAVRTIFKKLYDAGLIY 177 Query: 121 KG 122 + Sbjct: 178 QA 179 >gi|317178546|dbj|BAJ56334.1| valyl-tRNA synthetase [Helicobacter pylori F30] Length = 872 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN I N VS Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTAHLEN--NKNFANKIFNAVS 590 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75 HIGHA + + D+LAR+ R+DG L+ G D G A QN V K +DQ Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG----IATQN--VVEKQLLDQ 104 >gi|85707659|ref|ZP_01038725.1| valyl-tRNA synthetase [Erythrobacter sp. NAP1] gi|85689193|gb|EAQ29196.1| valyl-tRNA synthetase [Erythrobacter sp. NAP1] Length = 917 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 40/279 (14%) Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276 G+++ DP ++ W + T G+ + K +P L + G DIL +W Sbjct: 473 GVELTQDPD-VLDTWFSSALWPFATLGWPEENAPLLDKHFPNSLLISGFDIL----FFWD 527 Query: 277 AFLLS------ANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 A ++ P P+ ++ HG + G K+SKS GNV+DP+ +I++ G DALR+F+ Sbjct: 528 ARMMMMGQYNMGEAPWPR-LYLHGLVRAADGSKMSKSKGNVVDPLGLIDQFGADALRFFM 586 Query: 330 VREIACGKDGFYDKDGLK-------KRVNAD---LANGIGNLVSRSVSMILKDYDGMIPT 379 + G+D D+ ++ K NA +NGIG S LK Sbjct: 587 AAMESQGRDIKMDEKRVEGYRNFATKLWNATRFCQSNGIG------ASTTLK-------A 633 Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK 437 P A +++ I+ +EI M + A + D Y + KP + Sbjct: 634 PTARLAANQWIIGEVQAACEEIEAAMADLRFDAAANAIYQFTWSKFCDWYLELIKPVFAE 693 Query: 438 KTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 ++PD A V + Q+ ++L F+P + +++ Sbjct: 694 GSDPDAMPAKETREVAGWALDQILVMLHPFMPFITEELW 732 Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 11/62 (17%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 HIGHA + + D++ R+ RL G D L+ GTD +AG+ T++ V++ Sbjct: 52 HIGHALDNTLQDIVIRYERLRGKDALWVVGTD-----------HAGIATQMVVERQMEER 100 Query: 81 RD 82 +D Sbjct: 101 QD 102 >gi|261405682|ref|YP_003241923.1| isoleucyl-tRNA synthetase [Paenibacillus sp. Y412MC10] gi|261282145|gb|ACX64116.1| isoleucyl-tRNA synthetase [Paenibacillus sp. Y412MC10] Length = 1029 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 70/267 (26%), Positives = 119/267 (44%), Gaps = 34/267 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281 ++ VW D+ + Y P K KF +PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPYAQYHY---PFEDKEKFEQQYPADMICEGIDQTRGWFYSLLAVSTLFT 569 Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 P K V + G IL G+K+SKS GNVIDP E+IEE G DA R+ L+ + A Sbjct: 570 GKAPY-KAVMATGHILDENGQKMSKSKGNVIDPWEIIEEYGTDAFRWALLADSAPWNSKR 628 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSR 396 + K G+ + + + + N + + + DG P F S D ILS + Sbjct: 629 FSK-GIVGEAKSKVVDTLVN--THAFLTLYAGIDGYDPKEHDFKGSNHKLDRWILSRLNS 685 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---------NPDRASTV 447 ++Q + + + A+ ++ ++ Y D W ++++ D+ + Sbjct: 686 LIQVVDKGL-------AVNDFLNAAKAIEAYVDELSNWYIRRSRDRFWGSGLGEDKLAAY 738 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIF 474 +T V+ L+ L+ F P L+ IF Sbjct: 739 GTLT-HVLLTLSKLMAPFTPMLSEDIF 764 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 19/125 (15%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI------------AKAAQN 64 N PHIGH +I D + R+ + G V+ G D HG + + +N Sbjct: 50 NGAPHIGHVLGRVIKDFVGRYQTMKGYHVVRKAGWDTHGLPVELGVEKQLGISGKQEIEN 109 Query: 65 AGVTT-----KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 GV K V + +R++ + + D T E + ++ + I DKG Sbjct: 110 YGVEAFIKKCKASVFEYEHKWRELTEAIAYWTDLDHPYITLENNYIESVWNILATIHDKG 169 Query: 118 DIYKG 122 +Y+G Sbjct: 170 LLYRG 174 >gi|315587041|gb|ADU41422.1| valine--tRNA ligase [Helicobacter pylori 35A] Length = 872 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN I N VS Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTAHLEN--NKNFANKIFNAVS 590 Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + D+LAR+ R+DG L+ G D G Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90 >gi|20804107|emb|CAD31310.1| HYPOTHETICAL, FUSION OF HYPOTHETICAL PROTEIN & ONE WITH PARTIAL SIMILARITY TO MET-TRNA SYNTHETASES [Mesorhizobium loti R7A] Length = 684 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 77/311 (24%), Positives = 120/311 (38%), Gaps = 38/311 (12%) Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL--------HVIGKD 266 DWG+ P +++VW + +L L S + W A L H G D Sbjct: 370 DWGLPAEGLPGQVIWVWPEMAFGFLYNIQALAT---SLGRDWNAALPSKDWQIVHFFGFD 426 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSH----------GFILHKGEKISKSLGNVIDPIEV 316 +HA+ +PA L +VFSH F L G+K S S G+ + EV Sbjct: 427 NSFYHALLYPA--------LYAEVFSHWTPRIRYHVNEFYLLDGQKFSTSRGHAVWGKEV 478 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 + VD +R L G+ + D L++ N N + I +D+ G Sbjct: 479 LGPKTVDVVRLHLGLTRPEGERTNFTLDALRRTKNEVFQGIWLNWLDALHREIKQDFGGC 538 Query: 377 IPTPGAFTESDESILSVCS--RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 +P G + +D + + R E + + RA AQ VS+ Y AQ Sbjct: 539 VPDAGDWAPADRAFFARIEIHRAAMERAYSDDGFSVRRAAAQACDFVSDCVVYRQAQDYE 598 Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRL 493 ++ P R T L + LA L +P+ A+ + + V+ E + + +RL Sbjct: 599 AARRLYPARTRTSLALQTTAAAILAQTLAPLMPRFASTLARAIDGVSTET--WPTSVRRL 656 Query: 494 KPGFMLHKTFD 504 PG TFD Sbjct: 657 APG----TTFD 663 Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 3/96 (3%) Query: 4 REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R +++ + PN H+GH + ADV RF R+ G++ TG+D++ +A A Sbjct: 137 RGPIFVFSTPPTPNGDLHLGHLSGPYFGADVYTRFLRMKGVEAYHLTGSDDYQSYVATRA 196 Query: 63 QNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRT 97 +A +T V +N + R +LD F+ T Sbjct: 197 -DADQSTPAKVARNYADEIRATLALLDCEVHSFLPT 231 >gi|218232538|ref|YP_002366903.1| isoleucyl-tRNA synthetase [Bacillus cereus B4264] gi|218160495|gb|ACK60487.1| isoleucine--tRNA ligase [Bacillus cereus B4264] Length = 1033 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++++ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G VL G D HG Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88 >gi|229127608|ref|ZP_04256597.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4] gi|84029507|sp|Q81E30|SYI2_BACCR RecName: Full=Isoleucyl-tRNA synthetase 2; AltName: Full=Isoleucine--tRNA ligase 2; Short=IleRS 2 gi|228655685|gb|EEL11534.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4] Length = 1033 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++++ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G VL G D HG Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88 >gi|227517771|ref|ZP_03947820.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0104] gi|227074780|gb|EEI12743.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0104] Length = 710 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +EK Y YP+ Q H+GH D+L+R R G +VL G D G + A Sbjct: 41 KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 100 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Y Sbjct: 101 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 160 Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178 + + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 161 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 214 Query: 179 YYE--SHPEFILPIER 192 E PE I ++R Sbjct: 215 DLELVDWPESIKDMQR 230 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 525 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 584 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353 EK+SKS GNV++P +V+ + G D LR + L IA ++G RV Sbjct: 585 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 644 Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413 + + G + R ++ +D + + + ++++ E+M N + A Sbjct: 645 IVDEEGKMRDRITTI-----------------NDGRLTKIYHQTVKKVTEDMANLHFNTA 687 Query: 414 LAQVISLVSEVDR 426 ++Q++ V+E ++ Sbjct: 688 ISQLMVFVNEANK 700 >gi|325568223|ref|ZP_08144631.1| leucine--tRNA ligase [Enterococcus casseliflavus ATCC 12755] gi|325158256|gb|EGC70408.1| leucine--tRNA ligase [Enterococcus casseliflavus ATCC 12755] Length = 804 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%) Query: 3 EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++ K Y YP+ Q H+GH D+L+RF R G +VL G D G + Sbjct: 29 DKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRFKRSQGYNVLHPMGWDAFGLPAEQY 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Sbjct: 89 ALDTGNDPAEFTKKNIETFRRQINALGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 148 Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177 Y+ W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 149 YEAEVPVNWVPELGTVIANEEVIDGKSERGGYDVIRKPMRQWM------LKITAYADRLL 202 Query: 178 SYYES--HPEFILPIER 192 E PE I ++R Sbjct: 203 DDLEEVDWPESIKEMQR 219 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 20/185 (10%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+F+ G IL Sbjct: 514 DYDKLKRWMPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFEKLFNQGMILGEN 573 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 EK+SKS GNV++P +VI + G D LR + + ++++GL+ G Sbjct: 574 NEKMSKSRGNVVNPDDVINQYGADTLRLYEMFMGPLDASIAWNENGLE---------GSR 624 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 + R +I+ + M F +D + V ++ ++++ E+ + + A++Q++ Sbjct: 625 KFLDRVWRLIVDENGKMRDRITTF--NDGKLSKVYNQTVKKVTEDYEQLHFNTAISQLMV 682 Query: 420 LVSEV 424 V+E Sbjct: 683 FVNEA 687 >gi|212636651|ref|YP_002313176.1| leucyl-tRNA synthetase [Shewanella piezotolerans WP3] gi|212558135|gb|ACJ30589.1| Leucyl-tRNA synthetase, class Ia [Shewanella piezotolerans WP3] Length = 865 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 108/254 (42%), Gaps = 18/254 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+AR+ RL G +VL G D G AA Sbjct: 38 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 98 KNNTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 157 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 + + DE +++V DG + V+ E +F +++ Y D+LL Sbjct: 158 KTANVNWCPNDETVLANEQVI---DGCCWRCD-TTVEQKEIPQWFIKITEYADELLKDID 213 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 + PE + ++R R+E I ++ S ++FD PD + YV I A Sbjct: 214 QLDEWPEQVKTMQRNWIGRSEGIEMTFQ----VADSDQSFDIYTTRPDTVMGVTYVAI-A 268 Query: 235 LTNYLTTTGYLDNP 248 + L +NP Sbjct: 269 AAHPLAKQAAANNP 282 >gi|261838479|gb|ACX98245.1| valyl-tRNA synthetase [Helicobacter pylori 51] Length = 872 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN I N VS Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTAHLEN--NKNFANKIFNAVS 590 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 21/35 (60%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + D+L R+ R+DG L+ G D G Sbjct: 56 HIGHALTLSLQDILTRYKRMDGYKTLYQPGLDHAG 90 >gi|229029917|ref|ZP_04185986.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1271] gi|228731425|gb|EEL82338.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1271] Length = 1033 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++ + G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ +T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKWTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDEYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I DV+AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|229079379|ref|ZP_04211921.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock4-2] gi|228703912|gb|EEL56356.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock4-2] Length = 1033 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++++ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G VL G D HG Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88 >gi|229069741|ref|ZP_04203026.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus F65185] gi|228713362|gb|EEL65252.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus F65185] Length = 1033 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++++ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G VL G D HG Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88 >gi|229144806|ref|ZP_04273203.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24] gi|296502780|ref|YP_003664480.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|228638528|gb|EEK94961.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24] gi|296323832|gb|ADH06760.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171] Length = 1033 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++++ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G VL G D HG Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88 >gi|229155782|ref|ZP_04283888.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342] gi|228627768|gb|EEK84489.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342] Length = 1033 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++E+ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I DV+AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|222095809|ref|YP_002529866.1| isoleucyl-tRNA synthetase [Bacillus cereus Q1] gi|221239867|gb|ACM12577.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus cereus Q1] Length = 1033 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++E+ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I DV+AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRTIKDVVARYKTMSGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|312277882|gb|ADQ62539.1| Valyl-tRNA synthetase, putative [Streptococcus thermophilus ND03] Length = 883 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 18/261 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + + Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D + Sbjct: 503 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561 Query: 344 DGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILSVCS 395 + + N N I N +SR + M + ++ + A +D IL + Sbjct: 562 EKMDASWN--FINKIWN-ISRYILMNNEGLTLDVARENVAKVAAGQAGNVTDRWILHNLN 618 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 + ++ EN A + + + + D Y + K L N D V + Sbjct: 619 ETIGKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKE-VLYSDNEDEKVITRSVLLY 677 Query: 454 VIRQLAILLQAFVPKLANKIF 474 + Q+ LL +P + +IF Sbjct: 678 TLDQILRLLHPIMPFVTEEIF 698 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEARLA 99 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 +G++ + F+D+ + M +D S + F T ++ R Sbjct: 100 ESGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ ++ KG IY+G + + + +D EV +K +G +Y+ + Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNY 205 >gi|301053711|ref|YP_003791922.1| isoleucyl-tRNA synthetase [Bacillus anthracis CI] gi|300375880|gb|ADK04784.1| isoleucyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI] Length = 1033 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++E+ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I DV+AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|228985290|ref|ZP_04145453.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774445|gb|EEM22848.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 1033 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++E+ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I DV+AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|226226689|ref|YP_002760795.1| valyl-tRNA synthetase [Gemmatimonas aurantiaca T-27] gi|226089880|dbj|BAH38325.1| valyl-tRNA synthetase [Gemmatimonas aurantiaca T-27] Length = 915 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 42/219 (19%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F R+ DK L+ + ILP ER V G++D ++SR+ + WG ++P Sbjct: 375 WFVRMQPLADKALAALRTGELRILP-ERWEAVYVNWLEGIRDWNISRQIW-WGHRVPVWY 432 Query: 222 --------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255 + ++ W + +T G+ D+ +A F Sbjct: 433 CNASCGHAPIVSRTDVTSCPGCGGTVRQDEDVLDTWFSSWLWPFSTLGWPDDTPDLRA-F 491 Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANL-----PLPKKVFSHGFIL-HKGEKISKSLGN 309 +P D+ V +IL F W A ++ + P V+ HG + + K+SKSLGN Sbjct: 492 YPGDVLVTAPEILFF----WVARMVMSGCWFLDKPPFHTVYLHGTVRDMQHRKMSKSLGN 547 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348 IDP++V+ G DALR+ +V + G D D L+K Sbjct: 548 GIDPLDVVRLYGADALRWTMVAGLGLGVDVMLDPTDLEK 586 >gi|161936377|ref|YP_140891.2| valyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066] gi|90108442|sp|Q5M111|SYV_STRT1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS Length = 883 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 18/261 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + + Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D + Sbjct: 503 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561 Query: 344 DGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILSVCS 395 + + N N I N +SR + M + ++ + A +D IL + Sbjct: 562 EKMDASWN--FINKIWN-ISRYILMNNEGLTLDVARENVAKVAAGQAGNVTDRWILHNLN 618 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 + ++ EN A + + + + D Y + K L N D V + Sbjct: 619 ETIGKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKE-VLYSDNEDEKVITRSVLLY 677 Query: 454 VIRQLAILLQAFVPKLANKIF 474 + Q+ LL +P + +IF Sbjct: 678 TLDQILRLLHPIMPFVTEEIF 698 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEARLA 99 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 +G++ + F+D+ + M +D S + F T ++ R Sbjct: 100 ESGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ ++ KG IY+G + + + +D EV +K +G +Y+ + Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNY 205 >gi|90101533|sp|Q8EX08|SYV_MYCPE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS Length = 869 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 89/352 (25%), Positives = 157/352 (44%), Gaps = 52/352 (14%) Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFD 215 V+ M E +F ++S Y K++ +S + PI+ +I+++ + L D +SR+ + Sbjct: 358 VEPMMSEQWFVKVSEYSKKVIELQKSSKKIQFFPIKFEKNLINWM-TNLNDWCISRQLW- 415 Query: 216 WGIKIP----DDPQYI-----------MYV--------WIDALTNYLTTTGYLDNPDGSK 252 WG +IP D + I +YV W + +TTT L + D Sbjct: 416 WGHQIPVWYKKDSKEIYVGTKPPKNEELYVRDNDVLDTWFSSGLWPITTTDALKSKDA-- 473 Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-FSHGFIL-----HKGEKISKS 306 +P ++ V G DI+ F W ++ +L L K+V F H +I K+SKS Sbjct: 474 --LFPTNVLVTGFDIIFF----WVFRMMFFSLYLKKEVPFKHCYITGLIRDEHNNKMSKS 527 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 LGN +DP +VIE+ G DALR FL+ + G+D Y ++ +K N + N R V Sbjct: 528 LGNGVDPNDVIEKYGADALRLFLLSSSSPGEDLCYVEEKVKSC--WGFINKLWNSF-RYV 584 Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423 M D++ TP + D+ IL+ ++ E + ++ +++ + Sbjct: 585 EMNSSDFNFDEDKTPKNLEDFDKWILNKFNKAYSEFLQQFNKYNFLVSIKKILDFTWDDF 644 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + Y EL K + L+V +I+++ IL P + + ++D Sbjct: 645 CNTYI------ELSKNRTSNQESKLWVLNYLIKKILILFHPMCPFVTSNLYD 690 >gi|84502708|ref|ZP_01000827.1| valyl-tRNA synthetase [Oceanicola batsensis HTCC2597] gi|84389103|gb|EAQ01901.1| valyl-tRNA synthetase [Oceanicola batsensis HTCC2597] Length = 1065 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 19/120 (15%) Query: 223 DPQYIMY-VWIDA------LTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAI 273 DP ++Y VW +A ++ L G L PD + K++P + V G+DIL F Sbjct: 620 DPTQVIYPVWREADVLDTWFSSGLWPIGTLGWPDETPEMKKYFPTSVLVTGQDILFF--- 676 Query: 274 YWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327 W A ++ L + + V+ HG + KG+K+SK++GNVIDP+E+I+E G DALR+ Sbjct: 677 -WVARMMMMQLAVVGEKPFSDVYLHGLVRDAKGKKMSKTVGNVIDPLEIIDEYGADALRF 735 Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Query: 4 REKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 R + Y S I PN H+GHA+ + D+L R+ R+ G D L+ GTD G Sbjct: 34 RSETY-SIMIPPPNVTGSLHVGHAFNNTLQDILIRWKRMQGFDTLWQPGTDHAG 86 >gi|308177478|ref|YP_003916884.1| leucine-tRNA ligase [Arthrobacter arilaitensis Re117] gi|307744941|emb|CBT75913.1| leucine-tRNA ligase [Arthrobacter arilaitensis Re117] Length = 829 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 14/180 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62 RE+ Y+ YP+ H+GHA + DV+AR+ RL G DV+ G D G AA Sbjct: 38 RERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYWRLRGYDVMHPIGWDSFGLPAENAAI 97 Query: 63 -QNAGVTTKVF--VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 +NA + +D + +F+ A + +D + T++ ++ + L+ K DKG Sbjct: 98 KRNAHPAEWTYKNIDTQAASFKRYA--ISADWDRRLHTSDPEYYRWTQWLFNKFYDKGLA 155 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA--QHNPVQWMEEEGYFFRLSAYQDKLL 177 Y+ + + +D+ +++V GA + A + + QW +F+++ Y D+LL Sbjct: 156 YRKDHPVNWCPKDQTVLANEQVVNGACERCGTAVTKKSLNQW------YFKITDYADRLL 209 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 27/203 (13%) Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 L+ A P + + G +L+ G+ +SKSLGN +D E +++ GVDA+R ++ D Sbjct: 571 LIDATEPF-SALLNQGQVLNGGKAMSKSLGNGVDLGEQLDKFGVDAVRLTMIFASPPEDD 629 Query: 339 GFYDKDGLKKRVNADLA-NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397 + AD++ +G ++R+ + D + D+++ V R Sbjct: 630 VDW----------ADVSPSGSQKFLARAWRIA---QDTTSEAGADYAAGDKALRQVTHRT 676 Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457 + E + + + + +A+ + LV+ + D+ T+P E Sbjct: 677 VHESAQLLDSGKFNVVIAKTMELVNATRKTIDSGA----GATDP--------AVREAATV 724 Query: 458 LAILLQAFVPKLANKIFDILFVA 480 +A LL F P A +++ L A Sbjct: 725 VAQLLSMFAPYTAEDMWEALGYA 747 >gi|229178578|ref|ZP_04305942.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus 172560W] gi|228604736|gb|EEK62193.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus 172560W] Length = 1033 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++++ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G VL G D HG Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88 >gi|148263856|ref|YP_001230562.1| valyl-tRNA synthetase [Geobacter uraniireducens Rf4] gi|146397356|gb|ABQ25989.1| valyl-tRNA synthetase [Geobacter uraniireducens Rf4] Length = 886 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 91/353 (25%), Positives = 149/353 (42%), Gaps = 53/353 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD-- 222 ++ ++ ++ L+ I+P + N ++++ ++D +SR+ + WG +IP Sbjct: 362 WYVKVGPLAEEALAAVRDGKTRIVPQQWENTYYEWMEN-IRDWCISRQIW-WGHRIPAWY 419 Query: 223 ------------DPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSK--AK 254 DP ++ W + +T G+ PD ++ A Sbjct: 420 CDHCGEITVAKVDPTACAKCGSEEIRQETDVLDTWFSSALWPFSTMGW---PDKTQELAS 476 Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308 F+P V G DIL F W A ++ L ++V +H +G+K+SKS G Sbjct: 477 FYPTSCLVTGFDILFF----WVARMMMMGLHFMEEVPFRDVYIHALVRDAQGQKMSKSKG 532 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 NVIDP+ VIE G DA R+ L A G+D ++ + N AN I N SR M Sbjct: 533 NVIDPLTVIEAYGTDAFRFTLAAFAAQGRDIKLAEERIAGYRN--FANKIWN-ASRFAMM 589 Query: 369 ILK--DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE-V 424 L+ D D + + +D IL + E+ E + + A A + SE Sbjct: 590 NLEGFDPDAVDADSLELSNADRWILFRLNETAGEVDEALAAYRFNDAAAALYRFTWSEFC 649 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D Y + K +L K + R T YV V+ L LL F+P + +I+ L Sbjct: 650 DWYIELVKD-DLYKGDSRRQVTARYVLWLVLEHLLRLLHPFMPFITEEIWQTL 701 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 14/80 (17%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA + D+L R+ R+ G +VL+ GTD +AG+ Sbjct: 41 SIVIPPPNITGVLHMGHALNNTLQDILCRWKRMSGFNVLWMPGTD-----------HAGI 89 Query: 68 TTKVFVD-QNSRNFRDMADV 86 T+ V+ Q S +D DV Sbjct: 90 ATQNVVERQLSAEGKDRHDV 109 >gi|228920925|ref|ZP_04084263.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838714|gb|EEM84017.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 1033 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++++ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G VL G D HG Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88 >gi|222100204|ref|YP_002534772.1| Isoleucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] gi|254782448|sp|B9K8X3|SYI_THENN RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|221572594|gb|ACM23406.1| Isoleucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] Length = 918 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 11/103 (10%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287 VWID+ +++ T D+P +P D+++ G D R FH+ + A + P Sbjct: 526 VWIDSGSSFEYITTREDHP-------FPLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPY- 577 Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 K+V +HGFI + G K+SKSLGNV+DP+EV+E+ G + LR +L Sbjct: 578 KEVLTHGFIKDELGRKMSKSLGNVVDPMEVVEKYGAEILRLWL 620 >gi|189083232|sp|Q087K2|SYL_SHEFN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS Length = 863 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 18/257 (7%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + +EK Y + YP+ + H+GH I DV+AR+ RL G +VL G D G A Sbjct: 30 ESKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENA 89 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A N + + +N ++ +L YD I T ++ + + ++ KG + Sbjct: 90 AINNKASPAPWTYENIDYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTQLYAKGLV 149 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178 YK S + DE +++V DG + +Q E +F +++ Y ++LL+ Sbjct: 150 YKKTSSVNWCPNDETVLANEQV---QDGCCWRCDTEVIQ-KEIPQWFIKITDYAEELLND 205 Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 + PE + ++R R+E I + ++ S +FD PD + YV I Sbjct: 206 IDTLDGWPEQVKAMQRNWIGRSEGIEMTFA----VADSDASFDIYTTRPDTLMGVTYVAI 261 Query: 233 DALTNYLTTTGYLDNPD 249 A + L +NP+ Sbjct: 262 -AAGHPLAEQSAQNNPE 277 >gi|30020298|ref|NP_831929.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|29895848|gb|AAP09130.1| Isoleucyl-tRNA synthetase, mupirocin resistant [Bacillus cereus ATCC 14579] Length = 1035 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 515 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 573 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++++ G DALR+ LV F Sbjct: 574 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 632 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 633 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 690 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 691 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 747 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 748 TISKLIAPFTPFVAEDI 764 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G VL G D HG Sbjct: 52 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 90 >gi|317154515|ref|YP_004122563.1| leucyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] gi|316944766|gb|ADU63817.1| leucyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] Length = 833 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 12/196 (6%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K Y+ YP+ + H+GH I DV+ARF + G +VL G D G AA Sbjct: 33 RPKYYVLEMFPYPSGKIHMGHVRNYSIGDVVARFKSMQGFNVLHPMGWDAFGLPAENAAI 92 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120 GV + QN R+ L SYD I + ++ + + K +KG Y Sbjct: 93 KHGVHPAAWTYQNIAEMREQLQRLGYSYDWRREIASCRPEYYKWEQKFFLKFLEKGLAYR 152 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K W + N+ + DG+ + V+ + E +F R++ Y D+LL+ Sbjct: 153 KHSPQNWCPDCNTVLANE----QVEDGKCWRCDSE-VEQKDMEQWFLRITDYADELLADL 207 Query: 181 ES----HPEFILPIER 192 +S PE +L ++R Sbjct: 208 DSLEGGWPERVLTMQR 223 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 33/197 (16%) Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 + + G +L G K+SKS GNV+DP +IE G DA R F++ K+ + G++ Sbjct: 577 LLTQGMVLKDGGKMSKSKGNVVDPNSMIERYGADATRLFILFASPPIKELEWSDQGIE-- 634 Query: 350 VNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESIL------SVCSRVLQE 400 G +SR ++ + D + PT A +SD + RV ++ Sbjct: 635 -------GAFRFLSRLWRLVEELEDRLHAVRPTSHAAPKSDAARQLRFKEHDTVRRVTRD 687 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460 I Q + A+A V+ LV+E+ D EL T P ++ + V Sbjct: 688 IENEFQ---FNTAIAAVMELVNEMYALKD-----ELADTEPKALASAIATAV-------T 732 Query: 461 LLQAFVPKLANKIFDIL 477 LL P L +++ + Sbjct: 733 LLSPVAPHLCEELWQTM 749 >gi|78222176|ref|YP_383923.1| valyl-tRNA synthetase [Geobacter metallireducens GS-15] gi|78193431|gb|ABB31198.1| valyl-tRNA synthetase [Geobacter metallireducens GS-15] Length = 887 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 89/351 (25%), Positives = 153/351 (43%), Gaps = 49/351 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD-- 222 ++ ++ ++ L+ + I+P + N ++++ ++D +SR+ + WG +IP Sbjct: 363 WYVKVGPLAEEALAAVKDGRTRIVPQQWENTYYDWMEN-IRDWCISRQIW-WGHRIPAWY 420 Query: 223 ------------DPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256 DP ++ W + +T G+ D K F+ Sbjct: 421 CDHCGETTVAKVDPTKCSKCGSDEIRQETDVLDTWFSSALWPFSTLGWPDQTSELKT-FY 479 Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL----PLP-KKVFSHGFIL-HKGEKISKSLGNV 310 P V G DIL F W A ++ L +P + V+ H + +G+K+SKS GNV Sbjct: 480 PTSCLVTGFDILFF----WVARMMMMGLHFMGEVPFRDVYIHALVRDAQGQKMSKSKGNV 535 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 IDP+ VI++ G DA R+ L A G+D ++ + N AN I N SR M L Sbjct: 536 IDPLVVIDQYGTDAFRFTLAAFAAQGRDIKLAEERIAGYRN--FANKIWN-ASRFALMNL 592 Query: 371 K--DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE-VDR 426 + D D + P F+ +D IL + +++E ++ + A + SE D Sbjct: 593 EGFDPDAVDPAGLEFSNADRWILYRFNAAAADVQEALEAYRYNDAATALYRFTWSEFCDW 652 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y + K +L + + R T YV V+ L LL F+P + +I+ L Sbjct: 653 YIELVKD-DLYRGDETRQRTARYVLWLVLEHLLRLLHPFMPFITEEIWQAL 702 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 S I PN H+GHA + DVL R+ R+ G +VL+ GTD G Sbjct: 41 SIVIPPPNVTGALHMGHALNNTLQDVLCRWKRMSGHNVLWMPGTDHAG 88 >gi|161751096|ref|NP_376312.2| isoleucyl-tRNA synthetase [Sulfolobus tokodaii str. 7] gi|84029571|sp|Q975H9|SYI_SULTO RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS Length = 1047 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 74/280 (26%), Positives = 134/280 (47%), Gaps = 31/280 (11%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276 ++PD + VW D+ + + G + + + P DL + G D LR F ++ Sbjct: 515 RVPD----VADVWFDSGVAFFASLG--KDWEKKWKEIGPVDLVLEGHDQLRGWFFSLLRA 568 Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVI--EEVGVDALRYFLVREI 333 +L P V HGF+L +G ++ KSLGN ++P +V E+ G D LR +L+R Sbjct: 569 GVILLDRAPY-NAVLVHGFMLDEQGREMHKSLGNYVEPSQVTENEKYGRDVLRLWLLRNT 627 Query: 334 ACGKDGFYDK--DGLKKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTE----S 386 F K D K+ +N I N+ V S M L ++D I + Sbjct: 628 TWEDAKFSWKALDQTKRDLNI-----IWNVYVFASTYMNLDNFDPRIYNLDNLKQYLRIE 682 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPD 442 D +LS +RV++E++E+M + +H ++ S ++ ++ R++ ++ W + +PD Sbjct: 683 DLWLLSRYNRVVKEVKESMNDFKVHELANKMTSFIIDDISRFYLRLVRKRAWN-ESNDPD 741 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + + + YV EV++ +LL +P +I+ FV D+ Sbjct: 742 KIA-MYYVLYEVLKGSLVLLSPVIPFTTERIYQD-FVVDK 779 Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 25/150 (16%) Query: 15 YPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------------QKIAK 60 YP++ PHIG + +I D + R+ RL G G D HG QK + Sbjct: 46 YPSSPIPHIGTVWNKVIKDCILRYERLAGFRTYDQPGYDTHGLPIEVAIEKQLGIQKKSD 105 Query: 61 AAQNAGV-----TTKVFVDQNSR----NFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111 + GV K F N+ NF+++ +D +++ T + +L K Sbjct: 106 IIEKIGVDNFVNKCKEFALNNASSLTANFKNIGIFMD--WNNPYMTLHNDYISNSWMLIK 163 Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 K ++G +YKG + + R E D EV Sbjct: 164 KAYERGLLYKGVHVLHWCPRCETTLADYEV 193 >gi|319404436|emb|CBI78039.1| Valyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498] Length = 907 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 23/271 (8%) Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPA----- 277 Q ++ W + +T G+ PD + F+P L V G DI+ F W A Sbjct: 476 QDVLDTWFSSALWPFSTLGW---PDKTIELTTFYPTSLSVTGFDIIFF----WVARMMMM 528 Query: 278 -FLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 +P P V+ H + + G K+SKS GN++DP+E+I++ G DALR+ L +A Sbjct: 529 GMHFMGEVPFPT-VYVHALVRDQYGAKMSKSKGNIVDPLELIDQYGADALRFTLAIMVAQ 587 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 G+D D ++ N + N +R M +D + IL+ S Sbjct: 588 GRDVKLDPSRVEGYRN--FVTKLWN-ATRFAEMNGVRHDLAFKPEKTKLAINRWILTELS 644 Query: 396 RVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 + + + + ++N + A + V + D Y + KP + +N D T Sbjct: 645 KTVLAVTKGIENYKFNDAAHALYRFVWNALCDWYLELLKP-VFQGSNEDSKKEAQACTAW 703 Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENR 484 V+ ++ LL F+P + +++ + + D R Sbjct: 704 VLDEVYKLLHPFMPHVTEELWSLTAMQDMKR 734 Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 12/97 (12%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 H+GHA I D++ RF R+ G +VL+ G D +AG+ T++ V++ Sbjct: 52 HMGHALNTTIQDIMVRFQRMQGKNVLWQPGMD-----------HAGIATQMVVERQLAER 100 Query: 81 RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117 R++ ++ + FI K H+ I+ ++ G Sbjct: 101 RELTR-QEMGREKFIECVWKWRHEAGGIITNQLKRLG 136 >gi|228958483|ref|ZP_04120203.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801110|gb|EEM48007.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 1033 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++++ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G VL G D HG Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88 >gi|145592190|ref|YP_001154192.1| isoleucyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514] gi|145283958|gb|ABP51540.1| Isoleucyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514] Length = 980 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 34/269 (12%) Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSK-----AKFWPADLHVIGKDILR--FHAIYWPAF 278 Y+M VW+D+ +L DG + K +P D G D R F+++ + Sbjct: 527 YVMDVWLDSGVAWLAAV------DGERNRELWGKLFPYDFVTEGIDQTRGWFYSLLATSV 580 Query: 279 LLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337 L + P K V G IL K G+K+SKS GNV+ ++ E+ G D +R +++ + A + Sbjct: 581 LYTGRAPY-KTVLIQGLILDKHGQKMSKSKGNVVWAKDLFEKYGADPVRLYILSKAAPWE 639 Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSR--SVSMILKDYDG----MIPTPGAFTESDESIL 391 D +D D + + V ADL GI V+R M L +D + G E D +L Sbjct: 640 DLSFDPDEV-RHVLADL--GILWNVARFADTYMSLDGFDAERYPLEEWLGRGLEEDRWVL 696 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQ----VISLVSEVDRYFDAQKPWELKKTNPDR--AS 445 S + ++ E ++N H+A+A V+ +S ++ W + T PD+ A Sbjct: 697 SELNSLVAEFASYLKNFEFHKAVAMWRDFVVETLSHRYLRLLRRRVWSDEPT-PDKYAAY 755 Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIF 474 VL+ VI+ + IL F P +A ++ Sbjct: 756 AVLH---HVIKTVLILASVFTPFVAEYLW 781 Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 21/42 (50%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58 N PH+GH DV+ RFHRL G DV G D G + Sbjct: 53 NGMPHVGHIRGRTYKDVVLRFHRLLGYDVWVQGGWDMQGMPV 94 >gi|256395449|ref|YP_003117013.1| methionine--tRNA ligase [Catenulispora acidiphila DSM 44928] gi|256361675|gb|ACU75172.1| Methionine--tRNA ligase [Catenulispora acidiphila DSM 44928] Length = 662 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 96/471 (20%), Positives = 171/471 (36%), Gaps = 47/471 (9%) Query: 1 MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59 + ER + ST PN H+GH + + ADV R+ RL G TG+D++ + Sbjct: 118 LTERPQFVFSTPPT-PNGDLHLGHLSGPYLGADVYVRYQRLLGNRAWHLTGSDDYQSYVT 176 Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDF-IRTTEKRHHDTCRILWKKISDKGD 118 A GVT S +DI D++ + + + + + + + ++ D G Sbjct: 177 AVAAKDGVTPAEAAAHYSAEIAATLKAMDIDVDEYYVTSVAEGYPEGLQGYFSRLVDSGH 236 Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN----------------PVQWM-- 160 + + Y + V + A N PV + Sbjct: 237 VSPASTPALFDAETHEYLYEVNVGGSCPACFSPAGGNICEECGEPNLVADLVDPVSGISG 296 Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214 + E Y L + D + + H +PI R DL +S + Sbjct: 297 TAPKQADAERYTLPLHEFADIVADH---HRRGRVPIRLRELAQRVFAHERLDLPVSHPS- 352 Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--------LHVIG 264 WG++ +D +++VW + +L L G + W + +H G Sbjct: 353 GWGVQPAEDDLDGQVIWVWPEMSYGFLHGIERLGAELG---ELWSSREPSRDWKIVHFFG 409 Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSH--GFILHKGEKISKSLGNVIDPIEVIEEVGV 322 D +H+I +P A+ + H F L +G+K S S + I E++ V Sbjct: 410 YDNSFYHSILYPVLYRLAHPEWNPDIDYHVNEFYLLEGQKFSTSRRHAIWGKEILNPGTV 469 Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382 DA+RY+L G+ + + + L G + + + + G +P G Sbjct: 470 DAVRYYLSSTRPEGERTDFRRAEFDRACAETLVGGWEQWLHDLGARLDAGFGGTVPDAGT 529 Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIH-RALAQVISLVSEVDRYFDAQK 432 +T + L+ S L EI + + R+ AQV+ + R F Q+ Sbjct: 530 WTSEQTAFLARLSLRLDEITAALNPEGFSLRSAAQVLDAIVGDARAFSRQQ 580 >gi|77414609|ref|ZP_00790750.1| valyl-tRNA synthetase [Streptococcus agalactiae 515] gi|77159348|gb|EAO70518.1| valyl-tRNA synthetase [Streptococcus agalactiae 515] Length = 883 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDTEAADFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556 Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+D+ + M +D S + F T ++ R Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|114561888|ref|YP_749401.1| leucyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] gi|114333181|gb|ABI70563.1| leucyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] Length = 872 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 18/257 (7%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + +EK Y + YP+ + H+GH I DV+AR+ RL G +VL G D G A Sbjct: 39 ESKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENA 98 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A N + + +N ++ +L YD I T ++ + + ++ KG + Sbjct: 99 AINNKASPAPWTYENIDYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTQLYAKGLV 158 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178 YK S + DE +++V DG + +Q E +F +++ Y ++LL+ Sbjct: 159 YKKTSSVNWCPNDETVLANEQV---QDGCCWRCDTEVIQ-KEIPQWFIKITDYAEELLND 214 Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232 + PE + ++R R+E I + ++ S +FD PD + YV I Sbjct: 215 IDTLDGWPEQVKAMQRNWIGRSEGIEMTFA----VADSDASFDIYTTRPDTLMGVTYVAI 270 Query: 233 DALTNYLTTTGYLDNPD 249 A + L +NP+ Sbjct: 271 -AAGHPLAEQSAQNNPE 286 >gi|319744516|gb|EFV96871.1| valine--tRNA ligase [Streptococcus agalactiae ATCC 13813] Length = 883 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDTEAADFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368 + + + N N I N +SR + M Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILM 583 Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+D+ + M +D S + F T + R Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERF--TLDDGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + +KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|170290812|ref|YP_001737628.1| isoleucyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174892|gb|ACB07945.1| isoleucyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8] Length = 982 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 125/265 (47%), Gaps = 23/265 (8%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276 +IPD IM VW D+ ++ + GY D S + +P D G D +R F ++ Sbjct: 519 RIPD----IMDVWYDSGISFFASLGYPYKTD-SLNEIFPVDFITEGHDQVRGWFFSLLRM 573 Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 LL P + V HGF+L KG ++ K LGN + P E+++ G D R F++ ++ Sbjct: 574 GVLLFGRAPY-RSVLMHGFMLDEKGREMHKRLGNYVPPQEIVKRFGRDCFRAFVLTKVPW 632 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI----LKDYDGMIPTPGAFTES-DESI 390 +D + G+++ V+ L N I N+ + + I +KD D P + ++ + Sbjct: 633 -QDLRFSWKGMEE-VSRKL-NIIWNVYVFATTYIGDRDIKDLD-----PSDVRDPINKWL 684 Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYFDAQKPWELKKTNPDRASTVLY 449 +S + ++ RE M+ +H A ++I+ LV +V + +++ + +S + Sbjct: 685 ISRLNTTMKNFREAMEEYNLHVASNEIINFLVEDVSHLYLRVSRKKIRSKDEATSSEWIS 744 Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474 V V+R L P LA KI+ Sbjct: 745 VLYYVLRNAIPYLSVVTPFLAEKIY 769 Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 24/159 (15%) Query: 5 EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +K + YP++ PH G + ++ D + RF R +G VL G D HG I + Sbjct: 41 KKFHFLDGPPYPSSDTPHPGTVWNKVVKDAVVRFKRGEGYFVLDKPGWDTHGLPIEVMTE 100 Query: 64 NA-GVTTK---------VFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRH 102 A G ++K FV+Q +R+F++ LD S ++ T E+ + Sbjct: 101 RALGFSSKKDIETFGIAKFVEQCRELAARNIESMTRHFKEFGVSLDWS-SPYV-TYEREY 158 Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141 ++ K+I + G +Y+G + R E +D EV Sbjct: 159 IESAWWGIKRIWENGMLYQGERPVHWCPRCETVLSDYEV 197 >gi|119489561|ref|ZP_01622321.1| valyl-tRNA synthetase [Lyngbya sp. PCC 8106] gi|119454473|gb|EAW35621.1| valyl-tRNA synthetase [Lyngbya sp. PCC 8106] Length = 912 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 69/303 (22%), Positives = 133/303 (43%), Gaps = 19/303 (6%) Query: 199 FVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256 FV + + ++ + T +G +K+ +P ++ W + +T G+ A ++ Sbjct: 437 FVVAKTEAEAVKKATEKFGKDVKLQQEPD-VLDTWFSSGLWPFSTLGW-PQETADLATYF 494 Query: 257 PADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313 P + G DI+ F + A +P K V+ HG IL G+K+SK+ GN IDP Sbjct: 495 PTNTLSTGFDIIFFWVARMTMMAGYFMDKMPF-KTVYIHGLILDENGKKMSKTAGNGIDP 553 Query: 314 IEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILK 371 + +I + G DA+RY L++E I G+D + + K + + + + N + + ++ Sbjct: 554 LLLINKYGTDAVRYTLIKEVIGAGQDIRLEYNREKDESASVEASRNFTNKIWNASRFVMM 613 Query: 372 DYDGMIPTPGAFTES------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SE 423 + +G P +S D+ ILS + +++ E +++ + A + + Sbjct: 614 NLEGKTPQQLGKPDSEKLELCDQWILSRFHKTVKQTCEYLESYGLGEAAREQYEFIWGDF 673 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483 D Y + KP L+ N + V+ + LL F+P + +I+ L E Sbjct: 674 CDWYIELVKP-RLQGENTESKLVAQQTLAYVLEGIMKLLHPFMPHITEEIWHTLTQTGEE 732 Query: 484 RCF 486 C Sbjct: 733 TCL 735 Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust. Identities = 14/32 (43%), Positives = 21/32 (65%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52 H+GHA+ + D L R+HR+ G + L+ GTD Sbjct: 56 HMGHAFNNSLIDTLIRYHRMKGDNTLYLPGTD 87 >gi|70607182|ref|YP_256052.1| valyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639] gi|90108444|sp|Q4J8X1|SYV_SULAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|68567830|gb|AAY80759.1| valyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639] Length = 831 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 20/255 (7%) Query: 230 VWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286 VW+D+ L TG+ D D S+ K +P+ L + G DI+R Y+ L+ N+P Sbjct: 491 VWVDSSVTVLYLTGFYD--DKSRFTKTFPSSLRLQGTDIIRTWLFYTYYRTLALAGNIPF 548 Query: 287 PKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345 K+V +G +L G ++SKS GNV+ P++ ++E G DA+R L+ + G D + D Sbjct: 549 -KEVLINGQVLGPDGTRMSKSKGNVVSPLDKVDEYGADAIRLTLL-DAKIGDDFPFKWDT 606 Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405 +K + N S I K I P E D+ IL + +Q+ E Sbjct: 607 VKSKKLLLQKL--WNAGRLSYPFIGKK---KINKPSKLHEIDKWILQEHKKFVQQSIEAY 661 Query: 406 QNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463 +N + + + S E D Y + +K + +Y +I+ L ILL Sbjct: 662 RNYDFYIVVESIYSYFWETIADEYLEL-----IKHRLFMEDESAIYTLSRIIKDLLILLY 716 Query: 464 AFVPKLANKIFDILF 478 P + ++++ L+ Sbjct: 717 PIAPHITEEMYERLY 731 Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 28/47 (59%) Query: 9 ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 I T + + + H+GHAY + I+D + RF RL+G +VL G D G Sbjct: 72 IDTPPPFTSGELHMGHAYWVTISDTIGRFKRLEGYNVLLPQGWDTQG 118 >gi|283770729|ref|ZP_06343621.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] gi|283460876|gb|EFC07966.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] Length = 876 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616 Query: 400 EI 401 + Sbjct: 617 TV 618 Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 30 EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89 Query: 56 QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97 K+ G+T D F + A Y FIR Sbjct: 90 AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128 >gi|30350185|gb|AAP31493.1| putative valyl-tRNA synthetase [Western X phytoplasma] Length = 860 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 53/152 (34%), Positives = 77/152 (50%), Gaps = 14/152 (9%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA--FLL 280 DP ++ W + L T G+ +N + +P D V G DIL F W + L Sbjct: 431 DPD-VLDTWFSSALWPLCTLGWPNNNVELFQRRFPVDTLVTGYDILTF----WVSKMALQ 485 Query: 281 SANL--PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 S NL +P K V HG I +G K+SKS GN +DPI++I++ G DALR+FL + G Sbjct: 486 SMNLIEKIPFKDVLLHGLIRDSQGHKMSKSKGNGVDPIDIIDKYGTDALRWFLTTNSSPG 545 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 D Y++ + N N I N +SR + + Sbjct: 546 ADLLYNETKIASSWN--FINKIWN-ISRFIKL 574 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 11/78 (14%) Query: 5 EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58 +K + I PN + H+GHA+ + D++ R ++ G DVLF G D G KI Sbjct: 31 DKTPFTIVIPPPNITGKLHLGHAWNNTLQDIIIRRKKMLGFDVLFLPGMDHAGIATQSKI 90 Query: 59 AKAAQNAGVTTKVFVDQN 76 + + G F +QN Sbjct: 91 KQKLKEEG-----FAEQN 103 >gi|116627368|ref|YP_819987.1| valyl-tRNA synthetase [Streptococcus thermophilus LMD-9] gi|116100645|gb|ABJ65791.1| valyl-tRNA synthetase [Streptococcus thermophilus LMD-9] Length = 883 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 18/261 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + + Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D + Sbjct: 503 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561 Query: 344 DGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILSVCS 395 + + N N I N +SR + M + ++ + A +D IL + Sbjct: 562 EKMDASWN--FINKIWN-ISRYILMNNEGLTLDVARENVAKVAAGQAGNVTDRWILHNLN 618 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 + ++ EN A + + + + D Y + K L N D V + Sbjct: 619 ETIGKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKE-VLYSDNEDEKVITRSVLLY 677 Query: 454 VIRQLAILLQAFVPKLANKIF 474 + Q+ LL +P + +IF Sbjct: 678 TLDQILRLLHPIMPFVTEEIF 698 Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEARLA 99 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 +G++ + F+D+ + M +D S + F T ++ R Sbjct: 100 ESGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ ++ KG IY+G + + + +D EV +K +G +Y+ + Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNY 205 >gi|26553494|ref|NP_757428.1| valyl-tRNA synthetase [Mycoplasma penetrans HF-2] gi|26453500|dbj|BAC43832.1| valyl-tRNA synthetase [Mycoplasma penetrans HF-2] Length = 872 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 89/352 (25%), Positives = 157/352 (44%), Gaps = 52/352 (14%) Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFD 215 V+ M E +F ++S Y K++ +S + PI+ +I+++ + L D +SR+ + Sbjct: 361 VEPMMSEQWFVKVSEYSKKVIELQKSSKKIQFFPIKFEKNLINWM-TNLNDWCISRQLW- 418 Query: 216 WGIKIP----DDPQYI-----------MYV--------WIDALTNYLTTTGYLDNPDGSK 252 WG +IP D + I +YV W + +TTT L + D Sbjct: 419 WGHQIPVWYKKDSKEIYVGTKPPKNEELYVRDNDVLDTWFSSGLWPITTTDALKSKDA-- 476 Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-FSHGFIL-----HKGEKISKS 306 +P ++ V G DI+ F W ++ +L L K+V F H +I K+SKS Sbjct: 477 --LFPTNVLVTGFDIIFF----WVFRMMFFSLYLKKEVPFKHCYITGLIRDEHNNKMSKS 530 Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 LGN +DP +VIE+ G DALR FL+ + G+D Y ++ +K N + N R V Sbjct: 531 LGNGVDPNDVIEKYGADALRLFLLSSSSPGEDLCYVEEKVKSC--WGFINKLWNSF-RYV 587 Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423 M D++ TP + D+ IL+ ++ E + ++ +++ + Sbjct: 588 EMNSSDFNFDEDKTPKNLEDFDKWILNKFNKAYSEFLQQFNKYNFLVSIKKILDFTWDDF 647 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + Y EL K + L+V +I+++ IL P + + ++D Sbjct: 648 CNTYI------ELSKNRTSNQESKLWVLNYLIKKILILFHPMCPFVTSNLYD 693 >gi|315105531|gb|EFT77507.1| leucyl-tRNA synthetase [Propionibacterium acnes HL030PA1] Length = 826 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE+ Y+ AYP+ H+GHA I DVLAR+ RL G DVL G D G AA Sbjct: 38 RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +D + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y K ++ W + D+ +++V G Q N QW +FR++ Y Sbjct: 154 LAYRKDSWANWCPI-DQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228 Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R + + D D + T+ D ++ V R + +I E ++ Sbjct: 631 ADVSPASTLKFLQRAWRVAAEVTSDPDADL------TQGDSALRRVTHRSIADITELLEG 684 Query: 408 QLIHRALAQVISLVSEVDRYFDA 430 + +A+++ LV+ + D+ Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707 >gi|261602393|gb|ACX91996.1| isoleucyl-tRNA synthetase [Sulfolobus solfataricus 98/2] Length = 1053 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 35/288 (12%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276 +IPD + VW D+ + + G + + P DL + G D LR F ++ Sbjct: 522 RIPD----VADVWFDSGVAFFASLG--KDWQEKWKELGPVDLVLEGHDQLRGWFFSLLRS 575 Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 +L P V HGF+L +G ++ KSLGN ++P V+E+ G D LR +L+R Sbjct: 576 GLILLDRAPYTS-VLVHGFMLDEQGREMHKSLGNYVEPSVVVEKYGRDILRLWLLRNTTW 634 Query: 336 GKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--------- 385 F + L KR DL V S+ M L +++ P +T Sbjct: 635 EDAKFSWKALELTKR---DLQIIWNTFVFASMYMNLDNFE-----PDKYTLDDIIKYAKI 686 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNP 441 D ILS + +L+++ E+M++ +H +I+ L+ +V R++ ++ W + N Sbjct: 687 EDLWILSRFNSMLKKVNESMKDYKVHEMTNYLINFLIEDVSRFYIRLIRKRAW--IEANT 744 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQS 488 + Y+ +++Q IL +P ++ KI+ V A E+ +S Sbjct: 745 QDKIAMYYILYYILKQWIILASTIIPFISEKIYKSFVVNAKESVSMES 792 Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Query: 2 KEREKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K REK YP++ PHIG + +I D + R+ R+ G V G D HG I Sbjct: 40 KRREKFLFIDGPPYPSSPTPHIGTIWNKVIKDCILRYQRVLGKRVHDQPGYDTHGLPIEV 99 Query: 61 AAQN-AGVTTK 70 A + G++ K Sbjct: 100 ATEKLLGISNK 110 >gi|259418508|ref|ZP_05742426.1| valyl-tRNA synthetase [Silicibacter sp. TrichCH4B] gi|259345903|gb|EEW57747.1| valyl-tRNA synthetase [Silicibacter sp. TrichCH4B] Length = 1047 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 75/129 (58%), Gaps = 17/129 (13%) Query: 212 KTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDI 267 ++F+ +++P DP ++ W ++ L G L P+ ++ +K++P V G+DI Sbjct: 589 RSFEGPMQVPMFRDPD-VLDTW---FSSGLWPIGTLGWPEWTEETSKYFPTSTLVTGQDI 644 Query: 268 LRF---HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318 L F + +L+ NLP+ ++ V+ HG + KG+K+SKS GNV+DP+E+IE Sbjct: 645 LFFWVARMMMMQLAVLNENLPVQERIPFDTVYLHGLVRDAKGKKMSKSTGNVVDPLEIIE 704 Query: 319 EVGVDALRY 327 E G DALR+ Sbjct: 705 EYGADALRF 713 Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75 H+GHA+ + D+L R+ R+ G D L+ GTD +AG+ T++ V++ Sbjct: 72 HMGHAFNNTLQDILIRWKRMQGFDTLWQPGTD-----------HAGIATQMVVER 115 >gi|217034230|ref|ZP_03439648.1| hypothetical protein HP9810_2g9 [Helicobacter pylori 98-10] gi|216943290|gb|EEC22752.1| hypothetical protein HP9810_2g9 [Helicobacter pylori 98-10] Length = 872 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 6/112 (5%) Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311 F+P + G DIL F + + + L LP K ++ H + KGEK+SKS GNVI Sbjct: 482 FYPNTTLITGFDILFFWVVRMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSKGNVI 540 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 DP+E+IE+ G D+LR+ L A G+D L+ N + AN I N VS Sbjct: 541 DPLEMIEKYGADSLRFTLANLCATGRDIKLSTAHLEN--NKNFANKIFNAVS 590 Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + D+LAR+ R+DG L+ G D G Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90 >gi|49483906|ref|YP_041130.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|81650951|sp|Q6GG42|SYV_STAAR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|49242035|emb|CAG40734.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] Length = 876 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616 Query: 400 EI 401 + Sbjct: 617 TV 618 Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 30 EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89 Query: 56 QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97 K+ G+T D F + A Y FIR Sbjct: 90 AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128 >gi|323440792|gb|EGA98501.1| valyl-tRNA synthetase [Staphylococcus aureus O11] gi|323442947|gb|EGB00570.1| valyl-tRNA synthetase [Staphylococcus aureus O46] Length = 876 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616 Query: 400 EI 401 + Sbjct: 617 TV 618 Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 30 EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89 Query: 56 QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97 K+ G+T D F + A Y FIR Sbjct: 90 AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128 >gi|315641872|ref|ZP_07896864.1| leucine--tRNA ligase [Enterococcus italicus DSM 15952] gi|315482440|gb|EFU72980.1| leucine--tRNA ligase [Enterococcus italicus DSM 15952] Length = 807 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%) Query: 3 EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 ++ K Y YP+ Q H+GH D+LAR R G +VL G D G + Sbjct: 32 QKPKFYALDMFPYPSGQGLHVGHPEGYTATDILARMKRSQGYNVLHPMGWDAFGLPAEQY 91 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G F +N FR + L SYD I TT+ ++ + ++ K+ +KG Sbjct: 92 ALDTGNDPAEFTKKNIETFRHQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 151 Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177 Y+ + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 152 YEAEVAVNWVPELGTVIANEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 205 Query: 178 SYYES--HPEFILPIER 192 E PE I ++R Sbjct: 206 EDLEEVDWPESIKEMQR 222 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 51/242 (21%) Query: 250 GSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILH-KGE 301 G ++ P D+++ G + H +Y W FL + K K+F+ G IL E Sbjct: 519 GKLTRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLFNQGMILGGNNE 578 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLA 355 K+SKS GNV++P +V+ + G D LR + L IA ++G +RV + Sbjct: 579 KMSKSRGNVVNPDDVVTQYGADTLRMYEMFMGPLDASIAWSENGLEGSRKFLERVWRLIV 638 Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415 + G L R ++ +D S+ V ++ ++++ E+ + A++ Sbjct: 639 DEEGKLRDRITTI-----------------NDGSLTKVYNQTVKKVTEDYNQLHFNTAIS 681 Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 Q++ V+E +A ++ Y VE Q LL P ++ ++++ Sbjct: 682 QMMVFVNEA-----------------YKAESLCYEYVEGFVQ---LLAPIAPHISEELWE 721 Query: 476 IL 477 +L Sbjct: 722 VL 723 >gi|292490669|ref|YP_003526108.1| leucyl-tRNA synthetase [Nitrosococcus halophilus Nc4] gi|291579264|gb|ADE13721.1| leucyl-tRNA synthetase [Nitrosococcus halophilus Nc4] Length = 819 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 6/177 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 REK Y + YP+ + H+GH I DV+AR+ R+ G +VL G D G AA Sbjct: 32 REKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARYQRMGGKNVLQPMGWDAFGLPAENAAM 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 V + QN R L +YD + T ++ + L+ K+ DKG +YK Sbjct: 92 QNRVPPDQWTYQNIDYMRGQLKRLGFAYDWSRELATCHPAYYHWEQWLFTKLFDKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 + D+ +++V DG+ + + V+ E +F +++AY ++LL+ Sbjct: 152 KTALVNWDPVDQTVLANEQV---VDGRGWRS-GAVVERREIPQWFLKITAYAEELLT 204 Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 10/88 (11%) Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302 + +W P D ++ G + H +Y F L+ + P + + G +L G K Sbjct: 518 RGHYWLPVDQYIGGIEHAVLHLLYARFFHKVMRDMGLVRGDEPF-THLLTQGMVLKDGAK 576 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330 +SKS GN +DP +IE+ G D R F++ Sbjct: 577 MSKSKGNTVDPQALIEQYGADTARLFIM 604 >gi|258424081|ref|ZP_05686963.1| valyl-tRNA synthetase [Staphylococcus aureus A9635] gi|257845702|gb|EEV69734.1| valyl-tRNA synthetase [Staphylococcus aureus A9635] Length = 876 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616 Query: 400 EI 401 + Sbjct: 617 TV 618 Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 30 EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89 Query: 56 QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97 K+ G+T D F + A Y FIR Sbjct: 90 AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128 >gi|228965178|ref|ZP_04126272.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto str. T04001] gi|228794412|gb|EEM41924.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto str. T04001] Length = 1033 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++++ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYNVKLTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I D++AR+ + G V+ G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHGLPVELGVEKQLGISGKNEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|55738435|gb|AAV62076.1| valyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066] Length = 901 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 18/261 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + + Sbjct: 461 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 520 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D + Sbjct: 521 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 579 Query: 344 DGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILSVCS 395 + + N N I N +SR + M + ++ + A +D IL + Sbjct: 580 EKMDASWN--FINKIWN-ISRYILMNNEGLTLDVARENVAKVAAGQAGNVTDRWILHNLN 636 Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 + ++ EN A + + + + D Y + K L N D V + Sbjct: 637 ETIGKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKE-VLYSDNEDEKVITRSVLLY 695 Query: 454 VIRQLAILLQAFVPKLANKIF 474 + Q+ LL +P + +IF Sbjct: 696 TLDQILRLLHPIMPFVTEEIF 716 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ Sbjct: 58 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEARLA 117 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 +G++ + F+D+ + M +D S + F T ++ R Sbjct: 118 ESGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 175 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ ++ KG IY+G + + + +D EV +K +G +Y+ + Sbjct: 176 KVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNY 223 >gi|15897625|ref|NP_342230.1| isoleucine-tRNA synthetase (ileS) [Sulfolobus solfataricus P2] gi|74566731|sp|Q9UXB1|SYI_SULSO RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|6015754|emb|CAB57581.1| isoleucyl-tRNA synthetase [Sulfolobus solfataricus P2] gi|13813890|gb|AAK41020.1| Isoleucine-tRNA synthetase (ileS) [Sulfolobus solfataricus P2] Length = 986 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 35/288 (12%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276 +IPD + VW D+ + + G + + P DL + G D LR F ++ Sbjct: 455 RIPD----VADVWFDSGVAFFASLG--KDWQEKWKELGPVDLVLEGHDQLRGWFFSLLRS 508 Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 +L P V HGF+L +G ++ KSLGN ++P V+E+ G D LR +L+R Sbjct: 509 GLILLDRAPYTS-VLVHGFMLDEQGREMHKSLGNYVEPSVVVEKYGRDILRLWLLRNTTW 567 Query: 336 GKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--------- 385 F + L KR DL V S+ M L +++ P +T Sbjct: 568 EDAKFSWKALELTKR---DLQIIWNTFVFASMYMNLDNFE-----PDKYTLDDIIKYAKI 619 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNP 441 D ILS + +L+++ E+M++ +H +I+ L+ +V R++ ++ W + N Sbjct: 620 EDLWILSRFNSMLKKVNESMKDYKVHEMTNYLINFLIEDVSRFYIRLIRKRAW--IEANT 677 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQS 488 + Y+ +++Q IL +P ++ KI+ V A E+ +S Sbjct: 678 QDKIAMYYILYYILKQWIILASTIIPFISEKIYKSFVVNAKESVSMES 725 >gi|257425780|ref|ZP_05602204.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257428446|ref|ZP_05604844.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257431080|ref|ZP_05607457.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257433763|ref|ZP_05610121.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257436679|ref|ZP_05612723.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|282904236|ref|ZP_06312124.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|282906061|ref|ZP_06313916.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908976|ref|ZP_06316794.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282914461|ref|ZP_06322247.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282919430|ref|ZP_06327165.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282924807|ref|ZP_06332473.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|283958416|ref|ZP_06375867.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|293503539|ref|ZP_06667386.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|293510553|ref|ZP_06669258.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|293537096|ref|ZP_06671776.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|295428236|ref|ZP_06820865.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590801|ref|ZP_06949439.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|257271474|gb|EEV03620.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257275287|gb|EEV06774.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278028|gb|EEV08676.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257281856|gb|EEV11993.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257284030|gb|EEV14153.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|282313173|gb|EFB43569.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|282317240|gb|EFB47614.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282321642|gb|EFB51967.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282327240|gb|EFB57535.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331353|gb|EFB60867.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595854|gb|EFC00818.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|283790565|gb|EFC29382.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|290919941|gb|EFD97009.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|291095205|gb|EFE25470.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|291466444|gb|EFF08965.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|295127636|gb|EFG57273.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575687|gb|EFH94403.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|315195567|gb|EFU25954.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00] Length = 876 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616 Query: 400 EI 401 + Sbjct: 617 TV 618 Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 30 EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89 Query: 56 QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97 K+ G+T D F + A Y FIR Sbjct: 90 AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128 >gi|323127776|gb|ADX25073.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 882 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G D+LR+FL A G+D Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ + E S ++V Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEEAESNVAKVAAS 602 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ +Q I L + I+ V+E Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625 Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 88 ATQAKVEERLR 98 >gi|282911292|ref|ZP_06319094.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282324987|gb|EFB55297.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|312437877|gb|ADQ76948.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60] Length = 876 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616 Query: 400 EI 401 + Sbjct: 617 TV 618 Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 9/101 (8%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 30 EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89 Query: 56 QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96 K+ G+T D F + A Y FIR Sbjct: 90 AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIR 127 >gi|242003968|ref|XP_002422927.1| leucyl-tRNA synthetase, putative [Pediculus humanus corporis] gi|212505820|gb|EEB10189.1| leucyl-tRNA synthetase, putative [Pediculus humanus corporis] Length = 841 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 4/122 (3%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++EK Y+ + YP+ H+GH I+DVLARF R+ G +V+ G D G AA Sbjct: 62 DKEKFYVLSMFPYPSGSLHMGHVRVYSISDVLARFFRMRGKNVIHPMGWDAFGLPAENAA 121 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119 G+ + QN N + + + L S+D +F T + ++ + L+ K+ ++G + Sbjct: 122 FEKGINPDEWTQQNIANMKSVMEKLCFSFDWSREFA-TCDSDYYKWTQFLFLKLYERGLV 180 Query: 120 YK 121 Y+ Sbjct: 181 YR 182 >gi|289547884|ref|YP_003472872.1| leucyl-tRNA synthetase [Thermocrinis albus DSM 14484] gi|289181501|gb|ADC88745.1| leucyl-tRNA synthetase [Thermocrinis albus DSM 14484] Length = 604 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 6/176 (3%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 EK+Y+ YP+ + H+GH I D +ARF R+ G VL G D G AA Sbjct: 30 EKVYVLEMFPYPSGRIHMGHVRNYTIGDAIARFLRMRGKAVLHPMGWDAFGLPAENAAIK 89 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 GV + N RD L SY D I T + ++ + ++ K +KG Y+ Sbjct: 90 HGVHPAQWTKSNISYMRDQLRRLGFSYDWDREIATCDPEYYRWNQWIFLKFLEKGLAYRK 149 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 Y DE +++V +G + P+ + ++ R++ Y ++LL Sbjct: 150 EAEVNYCPNDETVLANEQVIEGRCWRC----GTPIVRKKVPSWYLRITQYAERLLE 201 >gi|50842379|ref|YP_055606.1| leucyl-tRNA synthetase [Propionibacterium acnes KPA171202] gi|282854163|ref|ZP_06263500.1| leucine--tRNA ligase [Propionibacterium acnes J139] gi|50839981|gb|AAT82648.1| leucyl-tRNA synthetase [Propionibacterium acnes KPA171202] gi|282583616|gb|EFB88996.1| leucine--tRNA ligase [Propionibacterium acnes J139] gi|314966913|gb|EFT11012.1| leucyl-tRNA synthetase [Propionibacterium acnes HL082PA2] gi|314981254|gb|EFT25348.1| leucyl-tRNA synthetase [Propionibacterium acnes HL110PA3] gi|315091823|gb|EFT63799.1| leucyl-tRNA synthetase [Propionibacterium acnes HL110PA4] gi|315093169|gb|EFT65145.1| leucyl-tRNA synthetase [Propionibacterium acnes HL060PA1] gi|315103326|gb|EFT75302.1| leucyl-tRNA synthetase [Propionibacterium acnes HL050PA2] gi|327327734|gb|EGE69510.1| leucine--tRNA ligase [Propionibacterium acnes HL103PA1] Length = 826 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE+ Y+ AYP+ H+GHA I DVLAR+ RL G DVL G D G AA Sbjct: 38 RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +D + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y K ++ W + D+ +++V G Q N QW +FR++ Y Sbjct: 154 LAYRKDSWANWCPI-DQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R + + D D + T+ D ++ V R + +I E ++ Sbjct: 631 ADVSPASTLKFLQRAWRVAAEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684 Query: 408 QLIHRALAQVISLVSEVDRYFDA 430 + +A+++ LV+ + D+ Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707 >gi|159468872|ref|XP_001692598.1| predicted protein [Chlamydomonas reinhardtii] gi|158278311|gb|EDP04076.1| predicted protein [Chlamydomonas reinhardtii] Length = 962 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 11/155 (7%) Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD 249 +E R+E +S + L+ G+ + + + ++ W + +T G+ + Sbjct: 500 LEGRSEHYVVARSAEEAQRLAEAKHGAGVVLKQE-EDVLDTWFSSGLWPFSTLGWPNTQA 558 Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKI 303 KF+P + G DIL F W A ++ + K V+ HG + KG K+ Sbjct: 559 PDFQKFYPTQVLETGHDILFF----WVARMIMMGIEFTGKAPFNTVYLHGLVRDEKGRKM 614 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 SKSLGNVIDP++ I + G DALR+ L A G+D Sbjct: 615 SKSLGNVIDPLDTIGQYGTDALRFTLATGTAVGQD 649 >gi|148927961|ref|ZP_01811363.1| valyl-tRNA synthetase [candidate division TM7 genomosp. GTL1] gi|147886691|gb|EDK72259.1| valyl-tRNA synthetase [candidate division TM7 genomosp. GTL1] Length = 753 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 75/332 (22%), Positives = 137/332 (41%), Gaps = 53/332 (15%) Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216 +Q + ++ +F + +K E+ P + ++ ++ + L+D +LSR+ W Sbjct: 427 IQPLMKDQWFLSMRPLVEKAKKVIEAGDIQFTPSNSKRVLLQYLDN-LRDWNLSRQ-IPW 484 Query: 217 GIKIP-----DDPQYIMY------------------------VWIDALTNYLTTTGYLDN 247 GI IP D+P ++ W + TT YL+ Sbjct: 485 GIPIPAFQNIDNPDDWIFDSRVDRETIEVGGYTYKREEDTFDTWFSSGQWPFITTDYLEG 544 Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILHK-GE 301 G +KF+P D+ G D+L W A ++ L + K V+ HG +L + G+ Sbjct: 545 --GELSKFYPTDMMETGHDLLD----RWVARMIMLGLYMTDKVPFKNVYMHGMVLDEHGQ 598 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNVI+P+++I + G DA R ++ + G++ + K + AN + N+ Sbjct: 599 KMSKSKGNVINPMDIINKYGSDAFRLGIIASRSAGQNQAFST--TKVVAGRNFANKLWNI 656 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 + + + P P T +D I+ + +EI + + A V + Sbjct: 657 ARFIEDRVGEKFKNRAPEPQ--TIADHWIIRELNTASEEIDRLLSDYRFAEATEVVYHTI 714 Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451 + D Y +A K ++ NP L T Sbjct: 715 WDNVADWYVEASK----RQNNPGMLGGWLVAT 742 Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 S + PNA HIGH + D+L R+HR+ G D ++ G D G Sbjct: 113 SIVMPPPNANGNLHIGHGLTFNLQDILIRYHRMKGFDTIYIPGADHAG 160 >gi|323136665|ref|ZP_08071746.1| valyl-tRNA synthetase [Methylocystis sp. ATCC 49242] gi|322397982|gb|EFY00503.1| valyl-tRNA synthetase [Methylocystis sp. ATCC 49242] Length = 905 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 72/262 (27%), Positives = 114/262 (43%), Gaps = 25/262 (9%) Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285 ++ W + +T G+ D P+ S+ F+P ++ V G DI+ +W A ++ L Sbjct: 477 VLDTWFSSALWPFSTLGWPDETPELSR--FYPTNVLVTGFDII----FFWVARMMMMGLH 530 Query: 286 LPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339 K+ V+ H + KG K+SKS GNVIDP+ +I+E G DALR+ L A G+D Sbjct: 531 FKKEIPFKDVYIHALVRDEKGAKMSKSKGNVIDPLHLIDEYGADALRFTLAAMAAQGRDI 590 Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVL 398 ++ N A + N SR M D P T + I+ +R + Sbjct: 591 KLSTQRVEGYRN--FATKLWN-ASRFAEMNGCARVDSYDPRANKVT-LNRWIVGEAARTV 646 Query: 399 QEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRAST--VLYVTVEV 454 +E+ + + A V V D Y + KP T PD A T V Sbjct: 647 REVSAAIDAYRFNEAAGAAYRFVWNVFCDWYVELTKP---LLTGPDGAEKDETRATTAFV 703 Query: 455 IRQLAILLQAFVPKLANKIFDI 476 + Q+ LL F+P + +++ I Sbjct: 704 LDQIYALLHPFMPFITEELWAI 725 Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 13/69 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA + D+L R+HR+ G DVL+ GTD +AG+ Sbjct: 40 SIVIPPPNVTGSLHMGHALNNTLQDILVRYHRMKGEDVLWQPGTD-----------HAGI 88 Query: 68 TTKVFVDQN 76 T++ V++ Sbjct: 89 ATQMVVERQ 97 >gi|228955959|ref|ZP_04117895.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228803739|gb|EEM50422.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 1033 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++++ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G V+ G D HG Sbjct: 50 NGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHG 88 >gi|229109652|ref|ZP_04239238.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock1-15] gi|228673693|gb|EEL28951.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock1-15] Length = 1033 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++++ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVRLTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G VL G D HG Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88 >gi|7672209|emb|CAB89523.1| unnamed protein product [Pediococcus acidilactici] Length = 56 Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 29/54 (53%), Positives = 34/54 (62%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEH 54 M E YI+T I YP+ + HIG++Y I D ARF RL G DV F TGTDEH Sbjct: 2 MAENNTYYITTPIYYPSGKLHIGNSYTTIACDAEARFQRLQGKDVFFLTGTDEH 55 >gi|15621426|dbj|BAB65421.1| 907aa long hypothetical isoleucyl-tRNA synthetase [Sulfolobus tokodaii str. 7] Length = 907 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 74/280 (26%), Positives = 134/280 (47%), Gaps = 31/280 (11%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276 ++PD + VW D+ + + G + + + P DL + G D LR F ++ Sbjct: 375 RVPD----VADVWFDSGVAFFASLG--KDWEKKWKEIGPVDLVLEGHDQLRGWFFSLLRA 428 Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVI--EEVGVDALRYFLVREI 333 +L P V HGF+L +G ++ KSLGN ++P +V E+ G D LR +L+R Sbjct: 429 GVILLDRAPY-NAVLVHGFMLDEQGREMHKSLGNYVEPSQVTENEKYGRDVLRLWLLRNT 487 Query: 334 ACGKDGFYDK--DGLKKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTE----S 386 F K D K+ +N I N+ V S M L ++D I + Sbjct: 488 TWEDAKFSWKALDQTKRDLNI-----IWNVYVFASTYMNLDNFDPRIYNLDNLKQYLRIE 542 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPD 442 D +LS +RV++E++E+M + +H ++ S ++ ++ R++ ++ W + +PD Sbjct: 543 DLWLLSRYNRVVKEVKESMNDFKVHELANKMTSFIIDDISRFYLRLVRKRAWN-ESNDPD 601 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 + + + YV EV++ +LL +P +I+ FV D+ Sbjct: 602 KIA-MYYVLYEVLKGSLVLLSPVIPFTTERIYQD-FVVDK 639 >gi|314923144|gb|EFS86975.1| leucyl-tRNA synthetase [Propionibacterium acnes HL001PA1] Length = 826 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE+ Y+ AYP+ H+GHA I DVLAR+ RL G DVL G D G AA Sbjct: 38 RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +D + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y K ++ W + D+ +++V G Q N QW +FR++ Y Sbjct: 154 LAYRKDSWANWCPI-DQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228 Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R + + D D + T+ D ++ V R + +I E ++ Sbjct: 631 ADVSPASTLKFLQRAWRVAAEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684 Query: 408 QLIHRALAQVISLVSEVDRYFDA 430 + +A+++ LV+ + D+ Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707 >gi|291287148|ref|YP_003503964.1| leucyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] gi|290884308|gb|ADD68008.1| leucyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] Length = 850 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 8/184 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y YP+ + H+GH I DV++R+ + GL+VL G D G AA Sbjct: 30 KEKFYCLEMFPYPSGKIHMGHVRNYAIGDVISRYKFMQGLNVLHPIGWDAFGLPAENAAI 89 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120 V+ QN + L ++Y D I T + ++ + ++ ++ +KG IY Sbjct: 90 ENSTHPAVWTKQNISYMKQQLKKLGLAYDWDREIATCDPEYYKWEQKIFIEMWEKGLIYK 149 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K + W + N+ + DG + N V E +G++ +++ Y D+LL Y Sbjct: 150 KKSHLNWCDDCNTVLANE----QVEDGACWRC-GNEVAIKELDGWYLKITDYADELLEYT 204 Query: 181 ESHP 184 + P Sbjct: 205 DKLP 208 >gi|47570085|ref|ZP_00240744.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241] gi|47553246|gb|EAL11638.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241] Length = 1033 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++E+ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKQTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFAPFVAEDI 762 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I DV+AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|310642970|ref|YP_003947728.1| isoleucyl-tRNA synthetase 2 [Paenibacillus polymyxa SC2] gi|309247920|gb|ADO57487.1| Isoleucyl-tRNA synthetase 2 [Paenibacillus polymyxa SC2] Length = 1029 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 18/259 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + +L+ Sbjct: 512 VIDVWFDSGSMPFAQHHYPFENNETFEQQF-PADMICEGIDQTRGWFYSLLAVSTMLTGK 570 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342 P K V + G +L +G+K+SKS GNVIDP EVI+E G DA R+ L+ + A + Sbjct: 571 APY-KAVMATGHVLDEQGQKMSKSKGNVIDPWEVIDEYGTDAFRWALLSDSAPWNSKRFS 629 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVL 398 K G+ + L + + N + + + D DG P F S D ILS + ++ Sbjct: 630 K-GIVGEAKSKLVDTLVN--THAFLTLYADIDGFDPARYPFKPSAHKLDRWILSRLNSLI 686 Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEVI 455 + + + + + S V E+ ++ + W T D+ +T EV+ Sbjct: 687 LVVDKALSVNDFLNSSKAIESFVDELSNWYIRRSRDRFWGNGLTE-DKLDAYRTLT-EVL 744 Query: 456 RQLAILLQAFVPKLANKIF 474 A LL F P LA I+ Sbjct: 745 LTTAKLLAPFTPLLAEDIY 763 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N +PHIGH +I D + R+ + G V+ G D HG + Q G++ K +++ Sbjct: 50 NGKPHIGHVLGRVIKDFVGRYQTMKGYRVVRKAGWDTHGLPVELGVQKQLGISHKPEIEE 109 >gi|302333330|gb|ADL23523.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JKD6159] Length = 876 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616 Query: 400 EI 401 + Sbjct: 617 TV 618 Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 30 EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89 Query: 56 QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97 K+ G+T D F + A Y FIR Sbjct: 90 AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128 >gi|282916924|ref|ZP_06324682.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|282319411|gb|EFB49763.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] Length = 876 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616 Query: 400 EI 401 + Sbjct: 617 TV 618 Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 30 EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89 Query: 56 QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97 K+ G+T D F + A Y FIR Sbjct: 90 AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128 >gi|253734551|ref|ZP_04868716.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|253727492|gb|EES96221.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] Length = 876 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 114/261 (43%), Gaps = 18/261 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVL- 398 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616 Query: 399 --QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 ++ + + + RAL I D Y + K + + ++ V + Sbjct: 617 TVTDLSDKYEFGEVGRALYNFI-WDDFCDWYIEMSKI-PMNSNDEEQKQVTRSVLSYTLD 674 Query: 457 QLAILLQAFVPKLANKIFDIL 477 + +L F+P + KI+ L Sbjct: 675 NIMRMLHPFMPFVTEKIWQSL 695 Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 30 EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89 Query: 56 QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97 K+ G+T D F + A Y FIR Sbjct: 90 AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128 >gi|329733231|gb|EGG69568.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193] Length = 876 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 114/261 (43%), Gaps = 18/261 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVL- 398 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616 Query: 399 --QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 ++ + + + RAL I D Y + K + + ++ V + Sbjct: 617 TVTDLSDKYEFGEVGRALYNFI-WDDFCDWYIEMSKI-PMNSNDEEQKQVTRSVLSYTLD 674 Query: 457 QLAILLQAFVPKLANKIFDIL 477 + +L F+P + KI+ L Sbjct: 675 NIMRMLHPFMPFVTEKIWQSL 695 Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 30 EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89 Query: 56 QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97 K+ G+T D F + A Y FIR Sbjct: 90 AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128 >gi|327309987|ref|YP_004336884.1| leucyl-tRNA synthetase [Thermoproteus uzoniensis 768-20] gi|326946466|gb|AEA11572.1| leucyl-tRNA synthetase [Thermoproteus uzoniensis 768-20] Length = 940 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 62/151 (41%), Gaps = 27/151 (17%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K +I+ A YPN HIGH +IAD++AR+HR GL+VLF G G I A+ Sbjct: 28 KPKFFITAAYPYPNGAIHIGHGRTYLIADIMARYHRHKGLNVLFPMGFHYTGTPILTVAE 87 Query: 64 NAGVTT-------KVFVDQNSRNFRDMADV-------------------LDISYDDFIRT 97 + KV D R M D L I + T Sbjct: 88 SIAAGDVRAMEDFKVIYDVPEEELRKMGDPLYLANYFKELSKQYMKKMGLSIDWTREFTT 147 Query: 98 TEKRHHDTCRILWKKISDKGDIYKGCYS-GW 127 + + R +KK+ DKG + KG + GW Sbjct: 148 IDPEYQQFIRWQFKKLYDKGLLVKGRHPVGW 178 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 107/227 (47%), Gaps = 29/227 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311 ++P D GKD++ H ++ F SA P P+ + ++G++L +GEK+SKS NV+ Sbjct: 584 WYPLDWRNSGKDLIPNHLTFF-LFNHSAIFPKELWPRGIVANGWVLVEGEKMSKSKRNVL 642 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 + +++ G D LR L I+ D D R A I NLV + + Sbjct: 643 ALGKAVDQFGADPLRATLA--ISAEVDQDLDFRANVARSVARHLEEIYNLVVSTAERATR 700 Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI-SLVSEVDRYFDA 430 D +G+ P + S+ + L L++ + + + I +A V+ + ++RY + Sbjct: 701 DGEGL---PEMWLRSEAASL------LEKAAKALDDVAIRQAAVYVLYDMRRALERYLEM 751 Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + P RA +EV++ A+ ++ FVP LA ++++ L Sbjct: 752 VE-------VPSRA------VLEVLKAWAVAMEPFVPHLAEELWERL 785 >gi|322392565|ref|ZP_08066025.1| valine--tRNA ligase [Streptococcus peroris ATCC 700780] gi|321144557|gb|EFX39958.1| valine--tRNA ligase [Streptococcus peroris ATCC 700780] Length = 883 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 19/200 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + + Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D + Sbjct: 503 PF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 + + N N I N +SR IL + +G+ + E + +V+++ Sbjct: 562 EKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEQATANVEKVIKKEAG 606 Query: 404 NMQNQLIHRALAQVISLVSE 423 N+ ++ I L + I V+E Sbjct: 607 NVTDRWILHNLNETIGKVTE 626 Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 S I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG 87 >gi|298694934|gb|ADI98156.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133] Length = 876 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616 Query: 400 EI 401 + Sbjct: 617 TV 618 Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 30 EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89 Query: 56 QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97 K+ G+T D F + A Y FIR Sbjct: 90 AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128 >gi|284174950|ref|ZP_06388919.1| isoleucine-tRNA synthetase (ileS) [Sulfolobus solfataricus 98/2] Length = 986 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 35/288 (12%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276 +IPD + VW D+ + + G + + P DL + G D LR F ++ Sbjct: 455 RIPD----VADVWFDSGVAFFASLG--KDWQEKWKELGPVDLVLEGHDQLRGWFFSLLRS 508 Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 +L P V HGF+L +G ++ KSLGN ++P V+E+ G D LR +L+R Sbjct: 509 GLILLDRAPYTS-VLVHGFMLDEQGREMHKSLGNYVEPSVVVEKYGRDILRLWLLRNTTW 567 Query: 336 GKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--------- 385 F + L KR DL V S+ M L +++ P +T Sbjct: 568 EDAKFSWKALELTKR---DLQIIWNTFVFASMYMNLDNFE-----PDKYTLDDIIKYAKI 619 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNP 441 D ILS + +L+++ E+M++ +H +I+ L+ +V R++ ++ W + N Sbjct: 620 EDLWILSRFNSMLKKVNESMKDYKVHEMTNYLINFLIEDVSRFYIRLIRKRAW--IEANT 677 Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQS 488 + Y+ +++Q IL +P ++ KI+ V A E+ +S Sbjct: 678 QDKIAMYYILYYILKQWIILASTIIPFISEKIYKSFVVNAKESVSMES 725 >gi|146302874|ref|YP_001190190.1| isoleucyl-tRNA synthetase [Metallosphaera sedula DSM 5348] gi|145701124|gb|ABP94266.1| Isoleucyl-tRNA synthetase [Metallosphaera sedula DSM 5348] Length = 1066 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 72/281 (25%), Positives = 129/281 (45%), Gaps = 34/281 (12%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276 ++PD + VW D+ + ++ G + + P DL + G D LR F ++ Sbjct: 534 RVPD----VADVWFDSGVAFFSSLG--KDWMSKWKELGPVDLVLEGHDQLRGWFFSLLRS 587 Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 +L P + V HGF+L +G ++ KSLGN ++P VIE+ G D LR L+R Sbjct: 588 GVILDDRAPY-EAVLVHGFMLDEQGREMHKSLGNYVEPSVVIEKYGRDVLRLMLLRNTTW 646 Query: 336 GKDGFYDKD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-------D 387 F +K+ L +R DL + S+ M L D PT + E+ D Sbjct: 647 EDVKFSEKNLELSQR---DLQIIWNVFLFTSMYMNL---DNFSPTKMSLEEALKYARVED 700 Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPDR 443 I+S + + E M++ +H +++ ++ ++ R++ ++ WE + + D+ Sbjct: 701 RWIVSRFYNMRSRVSEAMRDYKVHELANELVRFMIEDISRFYLRLVRKRAWE-EGLSQDK 759 Query: 444 AS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 T+LY ++R+ I+ A VP A K++ V D+ Sbjct: 760 LVLYTILYY---IMREWLIMASAVVPYFAEKVYQTFVVNDK 797 Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 8/78 (10%) Query: 15 YPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA-------AQNAG 66 YP+A PHIG + +I D + R+ RL+G V G D HG I A +Q Sbjct: 66 YPSAPIPHIGTIWNKVIKDSILRYKRLEGYRVHDQPGYDTHGLPIEVAVERKLNISQKRD 125 Query: 67 VTTKVFVDQNSRNFRDMA 84 + K+ V++ + RD A Sbjct: 126 IYDKIGVEKFVQLCRDFA 143 >gi|82751253|ref|YP_416994.1| valyl-tRNA synthetase [Staphylococcus aureus RF122] gi|123547885|sp|Q2YTA0|SYV_STAAB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|82656784|emb|CAI81213.1| valyl-tRNA synthetase [Staphylococcus aureus RF122] Length = 876 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616 Query: 400 EI 401 + Sbjct: 617 TV 618 Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 30 EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89 Query: 56 QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97 K+ G+T D F + A Y FIR Sbjct: 90 AKVEAKLNEKGITR---YDLGREKFLEQAWDWKEEYASFIRA 128 >gi|238790771|ref|ZP_04634530.1| Leucyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] gi|238721129|gb|EEQ12810.1| Leucyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] Length = 860 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 13/206 (6%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + + YP+ + H+GH I DV++R+ R+ G +VL G D G AA Sbjct: 32 KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + N ++ +L Y D I T + ++ + + K+ +KG +YK Sbjct: 92 KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 + + D+ +++V DG + PV+ E +F +++ Y D+LL+ Sbjct: 152 KTSAVNWCPHDQTVLANEQVI---DGCCWRCD-TPVERKEIPQWFIKITDYADQLLNDLD 207 Query: 179 YYESHPEFILPIER----RNEVISFV 200 ES PE + ++R R+E + V Sbjct: 208 TLESWPEQVKTMQRNWIGRSEGVDIV 233 >gi|330837436|ref|YP_004412077.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] gi|329749339|gb|AEC02695.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] Length = 884 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 83/353 (23%), Positives = 151/353 (42%), Gaps = 55/353 (15%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F R+ DK L ++ P N S++++ ++D +SR+ + WG +IP Sbjct: 362 WFVRMRGMADKALKAWKDGEVTFYPRRWENTYSSWLEN-IRDWCISRQLW-WGHRIPVWY 419 Query: 222 -------------------------DDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKF 255 + ++ W + +T G+ D PD +F Sbjct: 420 CEDCGEMIVSRNDVTVCPKCGSSHLRQEEDVLDTWFSSWLWPFSTLGWPEDTPD--LKEF 477 Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFIL-HKGEKISKSLGN 309 +P + G DI+ F W + ++ A+L KV + G + +G K+SKSLGN Sbjct: 478 FPTQTLITGYDIIFF----WVSRMIMASLEFTGKVPFKDVYLTGLVRDRQGRKMSKSLGN 533 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 IDP+EV++ G DA+++ L +D D GL K + + AN I N SR + M Sbjct: 534 GIDPLEVVDLYGADAMKFTLAHLTVQSQDVLIDM-GLFK-MGSRFANKIWN-ASRFLLMK 590 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427 L+ + + D+ I + ++ ++ ++ + A V D Y Sbjct: 591 LEGRTKVSVPETELSIMDKWIYAELNQAAGRVQSTLEGYRFNEASQTVYDFFWNDFCDWY 650 Query: 428 FDAQKPWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +A K L+ +P DRA ++L ++++ + LL F+P + +I+ L Sbjct: 651 IEASKH-NLESNDPVVQDRAVSLL---LDILEESLRLLYPFLPFITQEIYSKL 699 Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 65/166 (39%), Gaps = 45/166 (27%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 H+GHA ++D + R+ R+ G L+ GTD +AG+ T+ V++ Sbjct: 53 HMGHALNNSLSDTIIRYQRMSGRKALWVPGTD-----------HAGIATQNVVERQLA-- 99 Query: 81 RDMADVLDISYDDFIRTT---EKRHHDT---------CRILWK----------------- 111 ++ D+ + F+ T +K+HH C W+ Sbjct: 100 KEGLSRHDLGREKFLERTWQVKKKHHSVIVKQLEKIGCSCDWEHERFTMDEGLSRAVREA 159 Query: 112 --KISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 + ++G IYKG Y Y DDEV YK +G+ Y + Sbjct: 160 FVTLYERGLIYKGKYLINYCPHCGTALADDEVEYKTLEGRLYQVSY 205 >gi|139473421|ref|YP_001128137.1| valyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo] gi|134271668|emb|CAM29901.1| valyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo] Length = 882 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G D+LR+FL A G+D Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ + E S ++V Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEEAESNVAKVAAS 602 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ +Q I L + I+ V+E Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625 Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 88 ATQAKVEERLR 98 >gi|156740388|ref|YP_001430517.1| valyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941] gi|156231716|gb|ABU56499.1| valyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941] Length = 907 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 46/278 (16%) Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 E +F R + L+ I+P ER +V ++D +SR+ + WG +IP Sbjct: 382 EQWFVRAGPLAELALAAVREGRTRIVP-ERFEKVFFHWLENIQDWCISRQLW-WGHRIPV 439 Query: 222 -------------DDPQY----------IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWP 257 DDP ++ W + +T G+ D+ PD +F+P Sbjct: 440 WYTPDGQMIVPGPDDPDPQGQGLVQDPDVLDTWFSSALWPFSTLGWPDDTPD--MRRFYP 497 Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANL-----PLPKKVFSHGFILHK-GEKISKSLGNVI 311 + G DIL +W A ++ P V+ HG + K G K+SK+ GNV+ Sbjct: 498 TSVMETGYDIL----FFWVARMMMMGCYLTGEPPFHTVYLHGLVRDKDGRKMSKTYGNVV 553 Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371 +P++VI++ G DALR+ L + G+D + + ++ N AN + N+ +S + Sbjct: 554 NPLDVIDQYGADALRFTLATSSSPGQDLNLNPERIESARN--FANKLWNMTRFVLSKL-- 609 Query: 372 DYDGMIPT---PGAFTESDESILSVCSRVLQEIRENMQ 406 D D + P T +D ILS R+ ++ M+ Sbjct: 610 DDDSLREARRDPQPATLADRWILSRYHRLALDVDRLMR 647 Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust. Identities = 46/210 (21%), Positives = 86/210 (40%), Gaps = 25/210 (11%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57 +R +S + H+GHA + I DV+ R+HR+ G L+ GTD G + Sbjct: 41 SDRPPFVVSMPPPNVTGELHMGHAMFVTIEDVMVRWHRMLGEPTLWLPGTDHAGIATQLQ 100 Query: 58 IAKAAQNAGVTTKV----------------FVDQNSRNFRDMADVLDISYDDFIRTTEKR 101 + + Q+ G++ + + + +R R + D + + F T + Sbjct: 101 VERLLQSEGLSRQQVGREEFLRRTWEWKEKYGGEITRQLRRLGASCDWTRERF--TLDPM 158 Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPV--Q 158 R +K++ D G IY+G +S + +D EV Y+ D Y+ ++ V Sbjct: 159 LSRAVRAAFKRLYDDGLIYRGYRLVNWSPNLQTAVSDLEVEYEERDMYLYHVRYPIVGDS 218 Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188 W R +A + ++ + PE I+ Sbjct: 219 WRPGVWGSGRWAAGATEFITVATTRPETIM 248 >gi|160915954|ref|ZP_02078162.1| hypothetical protein EUBDOL_01979 [Eubacterium dolichum DSM 3991] gi|158432430|gb|EDP10719.1| hypothetical protein EUBDOL_01979 [Eubacterium dolichum DSM 3991] Length = 874 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 86/347 (24%), Positives = 152/347 (43%), Gaps = 51/347 (14%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK--SGLKDLSLSRKTFDWGIKIP- 221 +F ++ D++L + E I +R E +F + ++D +SR+ + WG +IP Sbjct: 360 WFVKMKPLADEVLQAQGNEEERINFYPKRFEK-TFQQWLENIEDWCISRQLW-WGHRIPA 417 Query: 222 -------------DDPQYI---------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 ++P+ I + W + +T G+ + +++P D Sbjct: 418 WYHKDSNEIYVGMEEPKDIENWVQDEDVLDTWFSSALWPFSTLGWPEQT-ADLERYFPND 476 Query: 260 LHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312 + V G DI+ F W A + + P K V HG + +G K+SKSLGN +D Sbjct: 477 VLVTGYDIIFF----WVARMAFQTRYCMKSRPF-KDVLIHGLVRDSQGRKMSKSLGNGVD 531 Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372 P++VI + GVD+LR+FL G+D Y ++ K +A+ N I N +R V M K Sbjct: 532 PMDVIAKSGVDSLRFFLTTNSTPGQDLRYSEE--KVEASANFINKIWN-AARFVLMHTK- 587 Query: 373 YDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427 + M + T + D+ IL + VL+ + NM+ ++ S V + Y Sbjct: 588 -EDMCMSDVDLTHASMIDKWILRRFNEVLENVTANMEKYEYALVGNELYSFVWDDFCSWY 646 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + K R ++V V V+ + +L F+P + +I+ Sbjct: 647 IELSKAGLFSDDETTRHASV-STLVTVLSGILRMLHPFMPFVTEEIY 692 Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 16/96 (16%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 H+GHA++ + D++AR+ R+ G D+L+ G D +AG+ T+ VD+ +N Sbjct: 52 HLGHAWDTTLQDIVARYKRMRGFDMLWLPGMD-----------HAGIATQAKVDERLKN- 99 Query: 81 RDMADVLDISYDDFIRTT---EKRHHDTCRILWKKI 113 + DI ++F++ ++ + T R W K+ Sbjct: 100 -EGISRYDIGRENFLKRAWEWKEEYASTIRKQWAKM 134 >gi|15924653|ref|NP_372187.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|156979981|ref|YP_001442240.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|255006449|ref|ZP_05145050.2| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|81774901|sp|Q931Q1|SYV_STAAM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|166225533|sp|A7X383|SYV_STAA1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|14247435|dbj|BAB57825.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus Mu50] gi|156722116|dbj|BAF78533.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus Mu3] Length = 876 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 114/261 (43%), Gaps = 18/261 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVL- 398 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616 Query: 399 --QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456 ++ + + + RAL I D Y + K + + ++ V + Sbjct: 617 TVTDLSDKYEFGEVGRALYNFI-WDDFCDWYIEMSKI-PMNSNDEEQKQVTRSVLSYTLD 674 Query: 457 QLAILLQAFVPKLANKIFDIL 477 + +L F+P + KI+ L Sbjct: 675 NIMRMLHPFMPFVTEKIWQSL 695 Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 30 EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89 Query: 56 QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97 K+ G+T D F + A Y FIR Sbjct: 90 AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128 >gi|289553760|ref|ZP_06442970.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 605] gi|289438392|gb|EFD20885.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 605] Length = 875 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 34/263 (12%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280 DP ++ W + +T G+ D KF+P + V G DIL +W A ++ Sbjct: 438 DPD-VLDTWFSSALWPFSTLGWPDK-TAELEKFYPTSVLVTGYDIL----FFWVARMMMF 491 Query: 281 ------SANLPLPKK---------VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 A + L + VF HG I G K+SKS GNVIDP++ +E G DA Sbjct: 492 GTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADA 551 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LR+ L R + G D +D ++ N G + +++ +P+P T Sbjct: 552 LRFTLARGASPGGDLAVSEDAVRASRNF----GTKLFNATRYALLNGAAPAPLPSPNELT 607 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 ++D IL V E+ RA + D + D W L+ A Sbjct: 608 DADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFA--WDEFCD----WYLELAKTQLA 661 Query: 445 STVLYVTVEVIRQLAILLQAFVP 467 + + T + L LL+ P Sbjct: 662 QGLTHTTAVLAAGLDTLLRLLHP 684 Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 26/124 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA---KAAQNAGVTT 69 H+GHA E + D L R R+ G +VL+ GTD G Q++A K ++ G Sbjct: 49 HMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSVVEQQLAVDGKTKEDLG--R 106 Query: 70 KVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 ++FVD+ R + D +D S D F T ++ R ++K++ D G Sbjct: 107 ELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLYDAGL 164 Query: 119 IYKG 122 IY+ Sbjct: 165 IYRA 168 >gi|209559725|ref|YP_002286197.1| valyl-tRNA synthetase [Streptococcus pyogenes NZ131] gi|209540926|gb|ACI61502.1| Valyl-tRNA synthetase [Streptococcus pyogenes NZ131] Length = 882 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G D+LR+FL A G+D Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ E++ ++ V + Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL-----TLEEAESNVAKVAASEAG- 605 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ +Q I L + I+ V+E Sbjct: 606 ---NVTDQWILHNLNETIAKVTE 625 Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 88 ATQAKVEERLR 98 >gi|167625140|ref|YP_001675434.1| leucyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] gi|167355162|gb|ABZ77775.1| leucyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] Length = 868 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 18/254 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++R+ RL G +VL G D G AA Sbjct: 41 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVLQPIGWDSFGLPAENAAI 100 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 101 KNSTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 160 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 S + DE +++V DG + V+ E +F +++ Y ++LL+ Sbjct: 161 KTSSVNWCPNDETVLANEQVI---DGCCWRCD-TTVEQKEIPQWFIKITEYAEELLNDLD 216 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 + PE + ++R R+E I ++ S ++FD PD + YV I A Sbjct: 217 QLDEWPEQVKTMQRNWIGRSEGIEMTFQ----VADSDQSFDIYTTRPDTVMGVTYVAI-A 271 Query: 235 LTNYLTTTGYLDNP 248 + L ++NP Sbjct: 272 AGHPLAEQAAINNP 285 >gi|150396370|ref|YP_001326837.1| valyl-tRNA synthetase [Sinorhizobium medicae WSM419] gi|150027885|gb|ABR60002.1| valyl-tRNA synthetase [Sinorhizobium medicae WSM419] Length = 947 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 24/237 (10%) Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----------KVFSHGFILHK-GE 301 K++ D+ V G DI+ F W A ++ L K V+ H + K G+ Sbjct: 535 KYYQTDVLVTGFDIIFF----WVARMMMMGLHFMKDADGTPVEPFHTVYVHALVRDKNGQ 590 Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNVIDP+E+I+E G DALR+ L A G+D D + N + N Sbjct: 591 KMSKSKGNVIDPLELIDEYGADALRFTLAIMAAQGRDVKLDPARIAGYRN--FGTKLWNA 648 Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421 + +G IP + T ++ IL+ SR ++++ E +++ + A + V Sbjct: 649 TRFAEMNGATSSEGFIPEAASLT-TNRWILTELSRTIRDVSEAIEDYRFNDAAGTLYRFV 707 Query: 422 SE--VDRYFDAQKP-WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 D Y + KP + R S T V+ + LL F+P + +++D Sbjct: 708 WNQFCDWYLELLKPVFNGDDEAAKRESQA--CTAYVLDETYKLLHPFMPFMTEELWD 762 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 12/75 (16%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 H+GHA + D++ RF R+ G DVL+ G D +AG+ T++ V++ R Sbjct: 52 HMGHALNNTLQDLMVRFERMRGKDVLWQPGMD-----------HAGIATQMVVERQLRE- 99 Query: 81 RDMADVLDISYDDFI 95 R + ++ + FI Sbjct: 100 RQLPGRREMGREAFI 114 >gi|94990882|ref|YP_598982.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS10270] gi|94544390|gb|ABF34438.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS10270] Length = 882 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G D+LR+FL A G+D Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ E++ ++ V + Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL-----TLEEAESNVAKVAASEAG- 605 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ +Q I L + I+ V+E Sbjct: 606 ---NVTDQWILHNLNETIAKVTE 625 Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 88 ATQAKVEERLR 98 >gi|56807922|ref|ZP_00365746.1| COG0525: Valyl-tRNA synthetase [Streptococcus pyogenes M49 591] Length = 882 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G D+LR+FL A G+D Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ E++ ++ V + Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL-----TLEEAESNVAKVAASEAG- 605 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ +Q I L + I+ V+E Sbjct: 606 ---NVTDQWILHNLNETIAKVTE 625 Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 88 ATQAKVEERLR 98 >gi|319939650|ref|ZP_08014009.1| valyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] gi|319811239|gb|EFW07545.1| valyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] Length = 883 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWSFSTMGWPDTDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368 + + + N N I N +SR + M Sbjct: 559 FSYEKMDATWN--FINKIWN-ISRYILM 583 Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94 Query: 68 TTKVFVDQNSR 78 ++ D SR Sbjct: 95 EARLAEDGISR 105 >gi|15927242|ref|NP_374775.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315] gi|21283336|ref|NP_646424.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|49486490|ref|YP_043711.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|57650536|ref|YP_186549.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|87160762|ref|YP_494306.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195468|ref|YP_500272.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268144|ref|YP_001247087.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|150394211|ref|YP_001316886.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|151221770|ref|YP_001332592.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|161509882|ref|YP_001575541.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142585|ref|ZP_03567078.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253317192|ref|ZP_04840405.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732314|ref|ZP_04866479.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257794050|ref|ZP_05643029.1| valyl-tRNA synthetase [Staphylococcus aureus A9781] gi|258415754|ref|ZP_05682025.1| valyl-tRNA synthetase [Staphylococcus aureus A9763] gi|258422009|ref|ZP_05684929.1| valyl-tRNA synthetase [Staphylococcus aureus A9719] gi|258438233|ref|ZP_05689517.1| valyl-tRNA synthetase [Staphylococcus aureus A9299] gi|258443691|ref|ZP_05692030.1| valyl-tRNA synthetase [Staphylococcus aureus A8115] gi|258444929|ref|ZP_05693249.1| valyl-tRNA synthetase [Staphylococcus aureus A6300] gi|258447983|ref|ZP_05696115.1| valyl-tRNA synthetase [Staphylococcus aureus A6224] gi|258451821|ref|ZP_05699843.1| valyl-tRNA synthetase [Staphylococcus aureus A5948] gi|258454309|ref|ZP_05702278.1| valyl-tRNA synthetase [Staphylococcus aureus A5937] gi|262052238|ref|ZP_06024443.1| valyl-tRNA synthetase [Staphylococcus aureus 930918-3] gi|269203281|ref|YP_003282550.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282893160|ref|ZP_06301394.1| valyl-tRNA synthetase [Staphylococcus aureus A8117] gi|282920205|ref|ZP_06327930.1| valyl-tRNA synthetase [Staphylococcus aureus A9765] gi|282929338|ref|ZP_06336905.1| valyl-tRNA synthetase [Staphylococcus aureus A10102] gi|284024713|ref|ZP_06379111.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132] gi|294848686|ref|ZP_06789432.1| valyl-tRNA synthetase [Staphylococcus aureus A9754] gi|295405975|ref|ZP_06815783.1| valyl-tRNA synthetase [Staphylococcus aureus A8819] gi|296274908|ref|ZP_06857415.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1] gi|297207622|ref|ZP_06924057.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245099|ref|ZP_06928976.1| valyl-tRNA synthetase [Staphylococcus aureus A8796] gi|300911704|ref|ZP_07129148.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|304380744|ref|ZP_07363413.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|81649185|sp|Q6G8R2|SYV_STAAS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|81704362|sp|Q7A0P4|SYV_STAAW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|81781461|sp|Q99TJ8|SYV_STAAN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|81859571|sp|Q5HFA8|SYV_STAAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|122539344|sp|Q2FXR8|SYV_STAA8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|123485492|sp|Q2FG72|SYV_STAA3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|172048932|sp|A6QHJ8|SYV_STAAE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|189083635|sp|A6U2D1|SYV_STAA2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|189083636|sp|A5ITI8|SYV_STAA9 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|189083637|sp|A8Z2I4|SYV_STAAT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|13701460|dbj|BAB42754.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus N315] gi|21204776|dbj|BAB95472.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus MW2] gi|49244933|emb|CAG43394.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|57284722|gb|AAW36816.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|87126736|gb|ABD21250.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203026|gb|ABD30836.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741213|gb|ABQ49511.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|149946663|gb|ABR52599.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|150374570|dbj|BAF67830.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|160368691|gb|ABX29662.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723952|gb|EES92681.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257788022|gb|EEV26362.1| valyl-tRNA synthetase [Staphylococcus aureus A9781] gi|257839347|gb|EEV63820.1| valyl-tRNA synthetase [Staphylococcus aureus A9763] gi|257842053|gb|EEV66482.1| valyl-tRNA synthetase [Staphylococcus aureus A9719] gi|257848277|gb|EEV72268.1| valyl-tRNA synthetase [Staphylococcus aureus A9299] gi|257851097|gb|EEV75040.1| valyl-tRNA synthetase [Staphylococcus aureus A8115] gi|257856137|gb|EEV79052.1| valyl-tRNA synthetase [Staphylococcus aureus A6300] gi|257858744|gb|EEV81615.1| valyl-tRNA synthetase [Staphylococcus aureus A6224] gi|257860533|gb|EEV83359.1| valyl-tRNA synthetase [Staphylococcus aureus A5948] gi|257863539|gb|EEV86298.1| valyl-tRNA synthetase [Staphylococcus aureus A5937] gi|259159839|gb|EEW44878.1| valyl-tRNA synthetase [Staphylococcus aureus 930918-3] gi|262075571|gb|ACY11544.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|269941145|emb|CBI49532.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20] gi|282589070|gb|EFB94171.1| valyl-tRNA synthetase [Staphylococcus aureus A10102] gi|282594553|gb|EFB99538.1| valyl-tRNA synthetase [Staphylococcus aureus A9765] gi|282764478|gb|EFC04604.1| valyl-tRNA synthetase [Staphylococcus aureus A8117] gi|285817346|gb|ADC37833.1| Valyl-tRNA synthetase [Staphylococcus aureus 04-02981] gi|294824712|gb|EFG41135.1| valyl-tRNA synthetase [Staphylococcus aureus A9754] gi|294968972|gb|EFG44993.1| valyl-tRNA synthetase [Staphylococcus aureus A8819] gi|296887639|gb|EFH26537.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178179|gb|EFH37427.1| valyl-tRNA synthetase [Staphylococcus aureus A8796] gi|300887125|gb|EFK82326.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|302751490|gb|ADL65667.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340743|gb|EFM06674.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312830042|emb|CBX34884.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130705|gb|EFT86691.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03] gi|315198642|gb|EFU28970.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01] gi|320140457|gb|EFW32311.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131] gi|320143996|gb|EFW35765.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177] gi|329314337|gb|AEB88750.1| Valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131] gi|329728349|gb|EGG64786.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189] Length = 876 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616 Query: 400 EI 401 + Sbjct: 617 TV 618 Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 30 EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89 Query: 56 QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97 K+ G+T D F + A Y FIR Sbjct: 90 AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128 >gi|313901901|ref|ZP_07835320.1| Isoleucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] gi|313467842|gb|EFR63337.1| Isoleucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] Length = 939 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 31/265 (11%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 IM VW D+ +++ + + WPADL++ G D R F + A Sbjct: 525 IMDVWFDSGSSHAAVL------ETREDLTWPADLYLEGSDQHRGWFQSSLLTAVATRGRA 578 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P + V +HGF++ +G K+SKSLGNV+DP +VI G D LR + V G D + Sbjct: 579 PY-RAVLTHGFVVDGEGRKMSKSLGNVVDPNDVIRRYGADVLRLWAVSSDYRG-DVRISE 636 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDG---MIPTPGAFTESDESILSVCSRVLQE 400 D LK+ A++ I N + R + L D+D +P G E D L+ ++V + Sbjct: 637 DILKQ--MAEVYRKIRNTL-RFLLANLGDFDPARDAVPY-GELGELDRWALARLAQVTER 692 Query: 401 IR---ENMQNQLIHRALAQVISLVSEVDR-YFDAQKP--WELKKTNPDR--ASTVLYVTV 452 +R E Q L++ A+ V+++ Y D K + +P R A TVLY Sbjct: 693 VRRAYEEYQYHLVYHAVHNFC--VTDLSAFYLDVLKDRLYASLPADPRRRAAQTVLY--- 747 Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477 ++ R L +LL + A +++ L Sbjct: 748 QLARHLTLLLAPVLCHTAEEVWGHL 772 Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 15/142 (10%) Query: 15 YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA-QNAGVTTKVFV 73 Y N H+G A I+ DV+ R + G D + G D HG I + A + GV + Sbjct: 58 YANGDIHVGTALNKILKDVVVRHASMAGYDAPYVPGWDTHGLPIERRALEVLGVDRRAIS 117 Query: 74 DQNSRN-FRDMA-DVLDISYDDFIR------------TTEKRHHDTCRILWKKISDKGDI 119 RN RD A D ++ F R T E + ++ +++ +G I Sbjct: 118 PVELRNRCRDYALDQMNRQRQQFRRLGVLGDWERPYLTLEPEYEAKQIEVFGEMARRGYI 177 Query: 120 YKGCYSGWYSLRDEAYYNDDEV 141 Y+ YS ++ DE + E+ Sbjct: 178 YRNLYSVYWCPVDETALAEAEI 199 >gi|307256925|ref|ZP_07538703.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864659|gb|EFM96564.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 916 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + + YP+ + H+GH I DV++R+ R+ G +VL G D G AA Sbjct: 87 KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 146 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N + +L SY D + T ++ + + ++ KG +YK Sbjct: 147 KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 206 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + D +++V++G + PV+ E +F +++ Y ++LL++ + Sbjct: 207 KTSTVNWCPNDATVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLTHLD 262 Query: 182 SHPEF 186 + P++ Sbjct: 263 NLPQW 267 >gi|91228820|ref|ZP_01262727.1| leucyl-tRNA synthetase [Vibrio alginolyticus 12G01] gi|91187625|gb|EAS73950.1| leucyl-tRNA synthetase [Vibrio alginolyticus 12G01] Length = 857 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 17/218 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++RF RL G +V+ G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N ++ +L YD +F T + ++ + + K+ +KG +Y Sbjct: 92 KNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177 K S + D+ +++V DG + PV+ E +F +++ Y +L L Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206 Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSL 209 E PE + ++R R+E + F G +DL + Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFKVKGQQDLEV 244 >gi|321456139|gb|EFX67254.1| hypothetical protein DAPPUDRAFT_189542 [Daphnia pulex] Length = 965 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 43/270 (15%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 IM +W D+ ++ + P G +A F+ + G F + + S + P Sbjct: 552 IMDIWFDSGVSWNSVL-----PQGKQADFYLEGIDQFGG---WFQSSLLTSVASSGHAPY 603 Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE-------EVGVDALRYFLVRE------ 332 K +F HGF+L H+G K+SKSLGNVIDP +++ VG+DALR+++ Sbjct: 604 -KNIFVHGFVLDHEGRKMSKSLGNVIDPHLILDGDGKKQPAVGIDALRWWVASHVSANGG 662 Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391 I+ G +++ + L +GNL + + S K + +P +D+ +L Sbjct: 663 NISVGIHSIQQASEDIQKMRSVLRFLLGNLNAVTCSQ-FKQF-----SPTTLGLTDQYML 716 Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS-----EVDRYFDA---QKPWELKKTNPDR 443 +L E EN + +V SLVS V ++ + + + T+ DR Sbjct: 717 ----HLLSEFAENALSAYQEMNFRKVTSLVSAFINTSVSAFYCSIVKHRLYCHSLTSEDR 772 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 S L+V E++ Q+ +++ +P L +I Sbjct: 773 LS-ALFVLSEILDQITLIIAPILPHLTEEI 801 Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%) Query: 1 MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 ++ ++ + Y N +PH+GHA I+ D+L+R+ L G V F G D HG I Sbjct: 59 LQNEDEFILHDGPPYANGKPHMGHALNKILKDILSRYKLLSGKLVHFVPGWDCHGLPIEL 118 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDI 89 A + T ++ NS R A + + Sbjct: 119 KA----LETHDVLNSNSLEIRQRAKLFAL 143 >gi|317180884|dbj|BAJ58670.1| valyl-tRNA synthetase [Helicobacter pylori F32] Length = 872 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN I N VS Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSITHLEN--NKNFANKIFNAVS 590 Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + D+LAR+ R+DG L+ G D G Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90 >gi|239931291|ref|ZP_04688244.1| valyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] gi|291439664|ref|ZP_06579054.1| valyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] gi|291342559|gb|EFE69515.1| valyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] Length = 883 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 7/178 (3%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284 ++ W + +T G+ + + S AKF+P + V G DIL F F L A Sbjct: 454 VLDTWFSSGLWPFSTLGWPERTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 512 Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P + HG + + G+K+SKS GN ++P++ +++ G DALR+ L R G D + Sbjct: 513 PPFHTIALHGMVRDQFGKKMSKSFGNAVNPLDWMDKYGSDALRFTLARGANPGVDVPIGE 572 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 D ++ N AN I N +R M +G +P + +D ILS + V+ E+ Sbjct: 573 DWVQGSRN--FANKIWN-ATRFALMNGATVEGPLPDASRMSPTDRWILSRLNSVVAEV 627 >gi|71903958|ref|YP_280761.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS6180] gi|90108441|sp|Q48SA4|SYV_STRPM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|71803053|gb|AAX72406.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS6180] Length = 882 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G D+LR+FL A G+D Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ E++ ++ V + Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL-----TLEEAESNVAKVAASEAG- 605 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ +Q I L + I+ V+E Sbjct: 606 ---NVTDQWILHNLNETIAKVTE 625 Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 88 ATQAKVEERLR 98 >gi|329727331|gb|EGG63787.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172] Length = 876 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P + V G DI+ F W A ++ L Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498 Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG + G K+SKSLGN +DP++VI+E G D+LRYFL + G D Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399 Y + ++ N N I N S+ I +D+ I G + +D+ IL+ + + Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616 Query: 400 EI 401 + Sbjct: 617 TV 618 Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%) Query: 2 KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55 +++ K + I PN + H+GHA++ + D++ R R+ G D L+ G D G Sbjct: 30 EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89 Query: 56 QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97 K+ G+T D F + A Y FIR Sbjct: 90 AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128 >gi|167969772|ref|ZP_02552049.1| valyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] Length = 808 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 34/263 (12%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280 DP ++ W + +T G+ D KF+P + V G DIL +W A ++ Sbjct: 371 DPD-VLDTWFSSALWPFSTLGWPDK-TAELEKFYPTSVLVTGYDIL----FFWVARMMMF 424 Query: 281 ------SANLPLPKK---------VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 A + L + VF HG I G K+SKS GNVIDP++ +E G DA Sbjct: 425 GTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADA 484 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LR+ L R + G D +D ++ N G + +++ +P+P T Sbjct: 485 LRFTLARGASPGGDLAVSEDAVRASRNF----GTKLFNATRYALLNGAAPAPLPSPNELT 540 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 ++D IL V E+ RA + D + D W L+ A Sbjct: 541 DADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFA--WDEFCD----WYLELAKTQLA 594 Query: 445 STVLYVTVEVIRQLAILLQAFVP 467 + + T + L LL+ P Sbjct: 595 QGLTHTTAVLAAGLDTLLRLLHP 617 >gi|15609585|ref|NP_216964.1| valyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv] gi|15841972|ref|NP_337009.1| valyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551] gi|31793629|ref|NP_856122.1| valyl-tRNA synthetase [Mycobacterium bovis AF2122/97] gi|121638331|ref|YP_978555.1| valyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662283|ref|YP_001283806.1| valyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|148823649|ref|YP_001288403.1| valyl-tRNA synthetase [Mycobacterium tuberculosis F11] gi|215404386|ref|ZP_03416567.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987] gi|215412207|ref|ZP_03420969.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] gi|215431396|ref|ZP_03429315.1| valyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|224990825|ref|YP_002645512.1| valyl-tRNA synthase [Mycobacterium bovis BCG str. Tokyo 172] gi|254232583|ref|ZP_04925910.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase) [Mycobacterium tuberculosis C] gi|254365225|ref|ZP_04981271.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase) [Mycobacterium tuberculosis str. Haarlem] gi|260201576|ref|ZP_05769067.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|260205754|ref|ZP_05773245.1| valyl-tRNA synthetase [Mycobacterium tuberculosis K85] gi|289443974|ref|ZP_06433718.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289575143|ref|ZP_06455370.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis K85] gi|289746231|ref|ZP_06505609.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987] gi|289751055|ref|ZP_06510433.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis T92] gi|289754557|ref|ZP_06513935.1| valyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|289762618|ref|ZP_06521996.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase) [Mycobacterium tuberculosis GM 1503] gi|297732047|ref|ZP_06961165.1| valyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506] gi|298525927|ref|ZP_07013336.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] gi|54039701|sp|P67600|SYV_MYCBO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|54042057|sp|P67599|SYV_MYCTU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|2791488|emb|CAA16025.1| PROBABLE VALYL-tRNA SYNTHASE PROTEIN VALS (VALYL-tRNA SYNTHETASE) (VALINE--tRNA LIGASE) (VALINE TRANSLASE) [Mycobacterium tuberculosis H37Rv] gi|13882245|gb|AAK46823.1| valyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551] gi|31619222|emb|CAD97336.1| PROBABLE VALYL-tRNA SYNTHASE PROTEIN VALS (VALYL-tRNA SYNTHETASE) (VALINE--tRNA LIGASE) (VALINE TRANSLASE) [Mycobacterium bovis AF2122/97] gi|121493979|emb|CAL72456.1| Probable valyl-tRNA synthase protein valS [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124601642|gb|EAY60652.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase) [Mycobacterium tuberculosis C] gi|134150739|gb|EBA42784.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase) [Mycobacterium tuberculosis str. Haarlem] gi|148506435|gb|ABQ74244.1| valyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|148722176|gb|ABR06801.1| valyl-tRNA synthase valS (valyl-tRNA synthetase) [Mycobacterium tuberculosis F11] gi|224773938|dbj|BAH26744.1| valyl-tRNA synthase [Mycobacterium bovis BCG str. Tokyo 172] gi|289416893|gb|EFD14133.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289539574|gb|EFD44152.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis K85] gi|289686759|gb|EFD54247.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987] gi|289691642|gb|EFD59071.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis T92] gi|289695144|gb|EFD62573.1| valyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|289710124|gb|EFD74140.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase) [Mycobacterium tuberculosis GM 1503] gi|298495721|gb|EFI31015.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] gi|326904063|gb|EGE50996.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis W-148] gi|328458240|gb|AEB03663.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 4207] Length = 876 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 34/263 (12%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280 DP ++ W + +T G+ D KF+P + V G DIL +W A ++ Sbjct: 439 DPD-VLDTWFSSALWPFSTLGWPDK-TAELEKFYPTSVLVTGYDIL----FFWVARMMMF 492 Query: 281 ------SANLPLPKK---------VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 A + L + VF HG I G K+SKS GNVIDP++ +E G DA Sbjct: 493 GTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADA 552 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LR+ L R + G D +D ++ N G + +++ +P+P T Sbjct: 553 LRFTLARGASPGGDLAVSEDAVRASRNF----GTKLFNATRYALLNGAAPAPLPSPNELT 608 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 ++D IL V E+ RA + D + D W L+ A Sbjct: 609 DADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFA--WDEFCD----WYLELAKTQLA 662 Query: 445 STVLYVTVEVIRQLAILLQAFVP 467 + + T + L LL+ P Sbjct: 663 QGLTHTTAVLAAGLDTLLRLLHP 685 Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 26/124 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA---KAAQNAGVTT 69 H+GHA E + D L R R+ G +VL+ GTD G Q++A K ++ G Sbjct: 50 HMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSVVEQQLAVDGKTKEDLG--R 107 Query: 70 KVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 ++FVD+ R + D +D S D F T ++ R ++K++ D G Sbjct: 108 ELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLYDAGL 165 Query: 119 IYKG 122 IY+ Sbjct: 166 IYRA 169 >gi|326779369|ref|ZP_08238634.1| Valyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] gi|326659702|gb|EGE44548.1| Valyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] Length = 873 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 27/264 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + D S AKF+P + V G DIL F F L N + Sbjct: 453 VLDTWFSSGLWPFSTLGWPERTD-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYVNDGV 511 Query: 287 P--KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P + HG + + G+K+SKS GNV++P++ +++ G DALR+ L R G D + Sbjct: 512 PPFSTIVLHGMVRDEHGKKMSKSFGNVVNPLDWMDKYGSDALRFTLARGANPGTDVPIGE 571 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR- 402 + ++ +A +N I N +R M +G +P + +D ILS ++ + ++ Sbjct: 572 EWVQG--SAKFSNKIWN-ATRFALMNGATIEGDLPPVEEMSVTDRWILSRLNKTVADVDA 628 Query: 403 -------ENMQNQLIHRALAQVISLVSEVDR--YFDAQKPWELKKTNPDRASTVLYVTVE 453 + L H A +V E+ + +F +P E+ V E Sbjct: 629 FYDDFQFAKISEALRHFAWDEVFDWYVELSKTTFFAGGRPAEVSG----------RVLGE 678 Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477 V+ + LL VP + ++ L Sbjct: 679 VLDVMLRLLHPIVPFVTEALWTAL 702 >gi|251782968|ref|YP_002997271.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391598|dbj|BAH82057.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 882 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G D+LR+FL A G+D Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ + E S ++V Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEEAESNVAKVAAS 602 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ +Q I L + I+ V+E Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625 Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 88 ATQAKVEERLR 98 >gi|189083233|sp|B0TR44|SYL_SHEHH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS Length = 859 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 18/254 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++R+ RL G +VL G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVLQPIGWDSFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N ++ +L YD I T ++ + + K+ +KG +YK Sbjct: 92 KNSTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 S + DE +++V DG + V+ E +F +++ Y ++LL+ Sbjct: 152 KTSSVNWCPNDETVLANEQVI---DGCCWRCD-TTVEQKEIPQWFIKITEYAEELLNDLD 207 Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234 + PE + ++R R+E I ++ S ++FD PD + YV I A Sbjct: 208 QLDEWPEQVKTMQRNWIGRSEGIEMTFQ----VADSDQSFDIYTTRPDTVMGVTYVAI-A 262 Query: 235 LTNYLTTTGYLDNP 248 + L ++NP Sbjct: 263 AGHPLAEQAAINNP 276 >gi|90022948|ref|YP_528775.1| leucyl-tRNA synthetase [Saccharophagus degradans 2-40] gi|122995879|sp|Q21FG6|SYL_SACD2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|89952548|gb|ABD82563.1| leucyl-tRNA synthetase [Saccharophagus degradans 2-40] Length = 819 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y YP+ + H+GH I+DV++RFHR+ G +VL G D G AA Sbjct: 32 KEKFYCLAMFPYPSGRLHMGHVRNYTISDVISRFHRMQGKNVLHPMGWDAFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + N+ R L +D + T + ++ + + ++ +KG YK Sbjct: 92 KNNTAPAKWTYSNTDYMRKQLTELGFGFDWSREVTTCKPDYYKWEQWFFTRLYEKGLAYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 S + D+ +++V DGQ + V+ E +F R++ Y ++LL+ + Sbjct: 152 KVASVNWCPNDQTVLANEQV---VDGQCWRCD-TAVERKEIPQWFIRITDYAEELLADLD 207 Query: 182 SHPEF 186 P + Sbjct: 208 KLPNW 212 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 10/89 (11%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299 D KA +W P D +V G + H +Y F L+ + P +++ G +L Sbjct: 516 DPDKANYWLPVDQYVGGIEHAILHLLYARFFHKLMRDEGLVECDEPF-ERLLCQGMVLKD 574 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF 328 G K+SKS GN +DP ++I+ G D +R F Sbjct: 575 GTKMSKSKGNTVDPEDLIKTYGADTVRLF 603 >gi|94311905|ref|YP_585115.1| leucyl-tRNA synthetase [Cupriavidus metallidurans CH34] gi|122987833|sp|Q1LJ30|SYL_RALME RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|93355757|gb|ABF09846.1| leucyl-tRNA synthetase [Cupriavidus metallidurans CH34] Length = 873 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 16/209 (7%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 KE+ K Y + + YP+ + H+GH I DV+AR+ R++G +VL G D G A Sbjct: 36 KEKSKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGRNVLMPMGWDAFGMPAENA 95 Query: 62 AQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117 A N GV + N + + M +D S + + T ++ + L+ K+ +KG Sbjct: 96 ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPEYYRWNQWLFLKMLEKG 153 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y+ + + D+ +++V DG+ + + V+ E Y+ R++ Y +LL Sbjct: 154 IAYRKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAV-VEKREIPMYYLRITDYAQELL 209 Query: 178 SYYE--SHPEFILPIER----RNEVISFV 200 E PE + +++ R+E + F Sbjct: 210 GDLEGLGWPERVKIMQQNWIGRSEGVRFA 238 >gi|94988916|ref|YP_597017.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|94992808|ref|YP_600907.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS2096] gi|94542424|gb|ABF32473.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|94546316|gb|ABF36363.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS2096] Length = 882 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G D+LR+FL A G+D Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ + E S ++V Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEEAESNVAKVAAS 602 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ +Q I L + I+ V+E Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625 Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 88 ATQAKVEERLR 98 >gi|307244136|ref|ZP_07526254.1| isoleucine--tRNA ligase [Peptostreptococcus stomatis DSM 17678] gi|306492507|gb|EFM64542.1| isoleucine--tRNA ligase [Peptostreptococcus stomatis DSM 17678] Length = 1040 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 66/259 (25%), Positives = 120/259 (46%), Gaps = 34/259 (13%) Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310 + +PAD G D R F+++ + ++ P K V +L K G+K+SKS GN Sbjct: 547 ELFPADYICEGIDQTRGWFYSLLAVSTFVTGKSPY-KNVLVTDLVLDKNGKKMSKSKGNT 605 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMI 369 I+P E+ E+ G DALR++L+ +D+DGLK+ ++ IG L + + + Sbjct: 606 INPFEMFEKYGADALRWYLLYVSPPWTPLRFDEDGLKEI----MSKFIGTLKNTYNFFTL 661 Query: 370 LKDYDGMIPTPGAFT-----ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 + DG+ P E D ILS + + +EI EN++ +++++ ++ ++ Sbjct: 662 YANTDGLNPNDFFVEYKDRPELDRWILSKFNNLKKEIEENLEIFEVNKSIRRMTEFLN-- 719 Query: 425 DRYFDAQKPWELKKTN--------PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476 D W ++++ + +V T EV+R ++ F P L+ +++ Sbjct: 720 ----DDLSNWYIRRSRRRFWGTELTEDKKSVYNTTYEVLRDFCKMIAPFSPYLSEEMYRN 775 Query: 477 L------FVADENRCFQSL 489 L AD RC SL Sbjct: 776 LTGEYSVHCADYPRCDASL 794 >gi|297380329|gb|ADI35216.1| valyl-tRNA synthetase [Helicobacter pylori v225d] Length = 872 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN I N VS Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSITHLEN--NKNFANKIFNAVS 590 Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + D+LAR+ R+DG L+ G D G Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90 >gi|222153465|ref|YP_002562642.1| valyl-tRNA synthetase [Streptococcus uberis 0140J] gi|222114278|emb|CAR42908.1| valyl-tRNA synthetase [Streptococcus uberis 0140J] Length = 883 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 21/192 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDENAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP+EV+E+ G DALR+FL A G+D Sbjct: 499 TNERPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMEVVEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMI--------LKDYDGMIPTPGAFTESDESILS 392 + + + N N I N +SR + M + Y + A +D IL Sbjct: 559 FSYEKMDAAWN--FINKIWN-ISRYILMNNEGLTLAEAESYVAKVAASDAGNVTDRWILH 615 Query: 393 VCSRVLQEIREN 404 + + ++ EN Sbjct: 616 NLNETIVKVTEN 627 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 88 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 89 ATQAKVEERLR 99 >gi|315180775|gb|ADT87689.1| methionyl-tRNA synthetase [Vibrio furnissii NCTC 11218] Length = 244 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 60/239 (25%), Positives = 97/239 (40%), Gaps = 30/239 (12%) Query: 27 EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADV 86 E I AD+ R+ RL G V F D HG I AQ G+T + + S + Sbjct: 3 EHIQADIWVRYQRLRGNIVNFICADDAHGTPIMLKAQQMGMTPEEMIAAVSEEHQKDFAG 62 Query: 87 LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG-- 144 DIS+D++ T + + + ++ ++ G I S + E + D V KG Sbjct: 63 FDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQLFDPEKEMFLPDRFV-KGTC 121 Query: 145 --------------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSYY 180 A G+ Y+ NP + + E +FF L ++ L + Sbjct: 122 PKCKSENQYGDNCDACGETYSPTELINPKSAVSGATPIMKDSEHFFFDLPQFESMLKEWT 181 Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239 S L E N++ + +SGL+ +SR +G +IP + YVW+DA Y+ Sbjct: 182 RSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKNKFFYVWLDAPVGYM 237 >gi|269965469|ref|ZP_06179588.1| leucyl-tRNA synthetase [Vibrio alginolyticus 40B] gi|269829948|gb|EEZ84178.1| leucyl-tRNA synthetase [Vibrio alginolyticus 40B] Length = 857 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 17/218 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++RF RL G +V+ G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N ++ +L YD +F T + ++ + + K+ +KG +Y Sbjct: 92 KNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177 K S + D+ +++V DG + PV+ E +F +++ Y +L L Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206 Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSL 209 E PE + ++R R+E + F G +DL + Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEV 244 >gi|262394986|ref|YP_003286840.1| leucyl-tRNA synthetase [Vibrio sp. Ex25] gi|262338580|gb|ACY52375.1| leucyl-tRNA synthetase [Vibrio sp. Ex25] Length = 857 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 17/218 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++RF RL G +V+ G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N ++ +L YD +F T + ++ + + K+ +KG +Y Sbjct: 92 KNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177 K S + D+ +++V DG + PV+ E +F +++ Y +L L Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206 Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSL 209 E PE + ++R R+E + F G +DL + Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEV 244 >gi|215427833|ref|ZP_03425752.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T92] gi|218754182|ref|ZP_03532978.1| valyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503] gi|253798472|ref|YP_003031473.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 1435] gi|254551498|ref|ZP_05141945.1| valyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|294994442|ref|ZP_06800133.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 210] gi|297635056|ref|ZP_06952836.1| valyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207] gi|306776719|ref|ZP_07415056.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu001] gi|306780493|ref|ZP_07418830.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu002] gi|306785245|ref|ZP_07423567.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu003] gi|306789604|ref|ZP_07427926.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu004] gi|306793931|ref|ZP_07432233.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu005] gi|306798325|ref|ZP_07436627.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu006] gi|306804200|ref|ZP_07440868.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu008] gi|306808771|ref|ZP_07445439.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu007] gi|307080535|ref|ZP_07489705.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu011] gi|307085135|ref|ZP_07494248.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu012] gi|308378018|ref|ZP_07668650.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu009] gi|313659383|ref|ZP_07816263.1| valyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475] gi|253319975|gb|ACT24578.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 1435] gi|308214880|gb|EFO74279.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu001] gi|308326642|gb|EFP15493.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu002] gi|308330067|gb|EFP18918.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu003] gi|308333907|gb|EFP22758.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu004] gi|308337710|gb|EFP26561.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu005] gi|308341391|gb|EFP30242.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu006] gi|308344878|gb|EFP33729.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu007] gi|308349188|gb|EFP38039.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu008] gi|308353809|gb|EFP42660.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu009] gi|308361703|gb|EFP50554.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu011] gi|308365313|gb|EFP54164.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu012] gi|323718956|gb|EGB28106.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis CDC1551A] Length = 886 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 34/263 (12%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280 DP ++ W + +T G+ D KF+P + V G DIL +W A ++ Sbjct: 449 DPD-VLDTWFSSALWPFSTLGWPDK-TAELEKFYPTSVLVTGYDIL----FFWVARMMMF 502 Query: 281 ------SANLPLPKK---------VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 A + L + VF HG I G K+SKS GNVIDP++ +E G DA Sbjct: 503 GTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADA 562 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LR+ L R + G D +D ++ N G + +++ +P+P T Sbjct: 563 LRFTLARGASPGGDLAVSEDAVRASRN----FGTKLFNATRYALLNGAAPAPLPSPNELT 618 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 ++D IL V E+ RA + D + D W L+ A Sbjct: 619 DADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFA--WDEFCD----WYLELAKTQLA 672 Query: 445 STVLYVTVEVIRQLAILLQAFVP 467 + + T + L LL+ P Sbjct: 673 QGLTHTTAVLAAGLDTLLRLLHP 695 Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 26/124 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA---KAAQNAGVTT 69 H+GHA E + D L R R+ G +VL+ GTD G Q++A K ++ G Sbjct: 60 HMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSVVEQQLAVDGKTKEDLG--R 117 Query: 70 KVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 ++FVD+ R + D +D S D F T ++ R ++K++ D G Sbjct: 118 ELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLYDAGL 175 Query: 119 IYKG 122 IY+ Sbjct: 176 IYRA 179 >gi|33152252|ref|NP_873605.1| leucyl-tRNA synthetase [Haemophilus ducreyi 35000HP] gi|48428533|sp|Q7VM66|SYL_HAEDU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|33148474|gb|AAP95994.1| leucyl-tRNA synthetase [Haemophilus ducreyi 35000HP] Length = 861 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 6/177 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + + YP+ + H+GH I DV++R+ R+ G +VL G D G AA Sbjct: 32 KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N ++ VL SY D I T ++ + + ++ KG +YK Sbjct: 92 KNNTAPAKWTYENIEYMKNQLKVLGFSYDWDREITTCRPEYYKWEQWFFTELYKKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 + + DE +++V++G + PV+ + +F +++ Y ++LL+ Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQRDIPQWFIKITDYAEELLT 204 >gi|254230581|ref|ZP_04923945.1| leucyl-tRNA synthetase [Vibrio sp. Ex25] gi|151936897|gb|EDN55791.1| leucyl-tRNA synthetase [Vibrio sp. Ex25] Length = 761 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 17/218 (7%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++RF RL G +V+ G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N ++ +L YD +F T + ++ + + K+ +KG +Y Sbjct: 92 KNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177 K S + D+ +++V DG + PV+ E +F +++ Y +L L Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206 Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSL 209 E PE + ++R R+E + F G +DL + Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEV 244 >gi|229822985|ref|ZP_04449055.1| hypothetical protein GCWU000282_00278 [Catonella morbi ATCC 51271] gi|229787798|gb|EEP23912.1| hypothetical protein GCWU000282_00278 [Catonella morbi ATCC 51271] Length = 927 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 94/198 (47%), Gaps = 21/198 (10%) Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDP 224 R A+ L +Y + E IL E V + ++ ++ R+ D G P P Sbjct: 455 RQRAWGVPLPIFYAENGEAILTAETIEHVATLFETHGSNVWFEREAKDLLPEGFTHPASP 514 Query: 225 QY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275 IM VW D+ T+Y G L+ D +PADL++ G D R F++ + Sbjct: 515 NGKFTKETDIMDVWFDSGTSY---AGVLEARDYLT---FPADLYLEGSDQYRGWFNSSFT 568 Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334 + + + +P K V S GF+L KG K+SKSLGNVI P EV+ E+G D +R + V + Sbjct: 569 TS-VAAKGVPPYKAVLSQGFVLDGKGNKMSKSLGNVIVPEEVMNELGADIIRLW-VLSVD 626 Query: 335 CGKDGFYDKDGLKKRVNA 352 D KD LK+ A Sbjct: 627 SESDVRISKDILKQIAEA 644 >gi|21910809|ref|NP_665077.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS315] gi|28895501|ref|NP_801851.1| valyl-tRNA synthetase [Streptococcus pyogenes SSI-1] gi|81759036|sp|Q8K6M9|SYV_STRP3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|21905014|gb|AAM79880.1| putative valine-tRNA ligase [Streptococcus pyogenes MGAS315] gi|28810747|dbj|BAC63684.1| putative valine-tRNA ligase [Streptococcus pyogenes SSI-1] Length = 882 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ L Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQTLEF 497 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G D+LR+FL A G+D Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ + E S ++V Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEEAESNVAKVAAS 602 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ +Q I L + I+ V+E Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 98 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G+T + F+D+ + M +D S + F T ++ R Sbjct: 99 GQGITRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 156 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 157 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 204 >gi|110679054|ref|YP_682061.1| valyl-tRNA synthetase [Roseobacter denitrificans OCh 114] gi|109455170|gb|ABG31375.1| valyl-tRNA synthetase [Roseobacter denitrificans OCh 114] Length = 1031 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 74/298 (24%), Positives = 121/298 (40%), Gaps = 38/298 (12%) Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-----LDNPDGSK 252 F L +SL R DP ++ W + + T G+ LD + + Sbjct: 566 GFSNGSLSSVSLRR-----------DPD-VLDTWFSSGLWPIGTLGWTGDAELDAQNDAL 613 Query: 253 AKFWPADLHVIGKDILRFHAIYWPA------FLLSANLPLPKKVFSHGFIL-HKGEKISK 305 K++P + G DI+ F W A + ++ P V+ H + KG+K+SK Sbjct: 614 QKYFPTSTLITGFDIIFF----WVARMMMMQYAVTGQKPF-STVYVHALVRDEKGKKMSK 668 Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVS 363 SLGNVIDP+++I+E G DA+R+ L A G+D + + L N Sbjct: 669 SLGNVIDPLDMIDEFGADAVRFTLTAMAAMGRDLKLSTQRIAGYRNFGTKLWNACRFAEM 728 Query: 364 RSVSMILKDYDGMIPT---PGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVI 418 V +IPT P A E ++ I+ ++V +EI ++N + A Sbjct: 729 NEVFAQRAARTDVIPTQNRPPADVEQAVNKWIIGETAKVREEIDAALENYRFNDAANAAY 788 Query: 419 SLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + V D Y + KP N + A+ V+ Q ILL +P + ++ Sbjct: 789 AFVWGKVCDWYVELSKPLLQDAANAEFAAETRATMAWVLDQCMILLHPIMPFITEDLW 846 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 32/116 (27%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA+ + D+L R+HR+ G D L+ GTD +AG+ Sbjct: 40 SIMIPPPNVTGSLHMGHAFNNTLQDILIRWHRMRGFDTLWQPGTD-----------HAGI 88 Query: 68 TTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 T++ ++ N R D++ DDF+ R+ +K+ +G I Sbjct: 89 ATQMVTEREMAANGEGRRQ-----DMTRDDFV----------ARVWQQKVKSRGTI 129 >gi|289758580|ref|ZP_06517958.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis T85] gi|289714144|gb|EFD78156.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis T85] Length = 699 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 34/263 (12%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280 DP ++ W + +T G+ D KF+P + V G DIL +W A ++ Sbjct: 262 DPD-VLDTWFSSALWPFSTLGWPDK-TAELEKFYPTSVLVTGYDIL----FFWVARMMMF 315 Query: 281 ------SANLPLPKK---------VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 A + L + VF HG I G K+SKS GNVIDP++ +E G DA Sbjct: 316 GTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADA 375 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LR+ L R + G D +D ++ N G + +++ +P+P T Sbjct: 376 LRFTLARGASPGGDLAVSEDAVRASRNF----GTKLFNATRYALLNGAAPAPLPSPNELT 431 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 ++D IL V E+ RA + D + D W L+ A Sbjct: 432 DADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFA--WDEFCD----WYLELAKTQLA 485 Query: 445 STVLYVTVEVIRQLAILLQAFVP 467 + + T + L LL+ P Sbjct: 486 QGLTHTTAVLAAGLDTLLRLLHP 508 >gi|215446695|ref|ZP_03433447.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T85] Length = 714 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 34/263 (12%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280 DP ++ W + +T G+ D KF+P + V G DIL +W A ++ Sbjct: 277 DPD-VLDTWFSSALWPFSTLGWPDK-TAELEKFYPTSVLVTGYDIL----FFWVARMMMF 330 Query: 281 ------SANLPLPKK---------VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 A + L + VF HG I G K+SKS GNVIDP++ +E G DA Sbjct: 331 GTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADA 390 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LR+ L R + G D +D ++ N G + +++ +P+P T Sbjct: 391 LRFTLARGASPGGDLAVSEDAVRASRNF----GTKLFNATRYALLNGAAPAPLPSPNELT 446 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 ++D IL V E+ RA + D + D W L+ A Sbjct: 447 DADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFA--WDEFCD----WYLELAKTQLA 500 Query: 445 STVLYVTVEVIRQLAILLQAFVP 467 + + T + L LL+ P Sbjct: 501 QGLTHTTAVLAAGLDTLLRLLHP 523 >gi|182438720|ref|YP_001826439.1| valyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467236|dbj|BAG21756.1| putative valyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 873 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 27/264 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + D S AKF+P + V G DIL F F L N + Sbjct: 453 VLDTWFSSGLWPFSTLGWPERTD-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYVNDGV 511 Query: 287 P--KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P + HG + + G+K+SKS GNV++P++ +++ G DALR+ L R G D + Sbjct: 512 PPFSTIVLHGMVRDEHGKKMSKSFGNVVNPLDWMDKYGSDALRFTLARGANPGTDVPIGE 571 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR- 402 + ++ +A +N I N +R M +G +P + +D ILS ++ + ++ Sbjct: 572 EWVQG--SAKFSNKIWN-ATRFALMNGATIEGDLPPVEEMSVTDRWILSRLNKTVADVDA 628 Query: 403 -------ENMQNQLIHRALAQVISLVSEVDR--YFDAQKPWELKKTNPDRASTVLYVTVE 453 + L H A +V E+ + +F +P E+ V E Sbjct: 629 FYDDFQFAKISEALRHFAWDEVFDWYVELSKTTFFAGGRPAEVSG----------RVLGE 678 Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477 V+ + LL VP + ++ L Sbjct: 679 VLDVMLRLLHPIVPFVTEALWTAL 702 >gi|329116079|ref|ZP_08244796.1| leucine--tRNA ligase [Streptococcus parauberis NCFD 2020] gi|326906484|gb|EGE53398.1| leucine--tRNA ligase [Streptococcus parauberis NCFD 2020] Length = 833 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 14/199 (7%) Query: 2 KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + K Y YP+ A H+GH D+L+RF R G +VL G D G + Sbjct: 29 KSKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRSQGYNVLHPMGWDAFGLPAEQ 88 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118 A + G F +N NF+ + L SY D + TT+ ++ + ++ K+ +KG Sbjct: 89 YAMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGL 148 Query: 119 IYKGCYS-GWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175 Y+ + W A N++ + G G Y + QWM +++AY ++ Sbjct: 149 AYEAEVAVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 202 Query: 176 LLSYYES--HPEFILPIER 192 LL E PE I ++R Sbjct: 203 LLEDLEEVDWPESIKDMQR 221 >gi|32033514|ref|ZP_00133841.1| COG0495: Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208348|ref|YP_001053573.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20] gi|165976293|ref|YP_001651886.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303251268|ref|ZP_07337446.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303252870|ref|ZP_07339029.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247860|ref|ZP_07529896.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307252499|ref|ZP_07534395.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307261357|ref|ZP_07543032.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|166230605|sp|A3N0N2|SYL_ACTP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|238687565|sp|B0BPF7|SYL_ACTPJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|126097140|gb|ABN73968.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165876394|gb|ABY69442.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302648300|gb|EFL78497.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302649810|gb|EFL79988.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306855662|gb|EFM87829.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306860091|gb|EFM92108.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306869088|gb|EFN00890.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 861 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + + YP+ + H+GH I DV++R+ R+ G +VL G D G AA Sbjct: 32 KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N + +L SY D + T ++ + + ++ KG +YK Sbjct: 92 KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + D +++V++G + PV+ E +F +++ Y ++LL++ + Sbjct: 152 KTSTVNWCPNDATVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLTHLD 207 Query: 182 SHPEF 186 + P++ Sbjct: 208 NLPQW 212 >gi|307245736|ref|ZP_07527822.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254707|ref|ZP_07536535.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259149|ref|ZP_07540879.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853438|gb|EFM85657.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862380|gb|EFM94346.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866816|gb|EFM98674.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 861 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + + YP+ + H+GH I DV++R+ R+ G +VL G D G AA Sbjct: 32 KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N + +L SY D + T ++ + + ++ KG +YK Sbjct: 92 KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + D +++V++G + PV+ E +F +++ Y ++LL++ + Sbjct: 152 KTSTVNWCPNDATVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLTHLD 207 Query: 182 SHPEF 186 + P++ Sbjct: 208 NLPQW 212 >gi|206895292|ref|YP_002246977.1| leucyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] gi|206737909|gb|ACI16987.1| leucyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] Length = 838 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 8/174 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K Y+ YP+ + H+GH + DV+AR++R+ G DVL G D G AA Sbjct: 46 KPKQYVLEMFPYPSGKLHMGHVRNYSLGDVVARYNRMRGFDVLHPMGWDAFGLPAENAAI 105 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+ + + N R+ L SY D + T ++ + L+ K+ + G YK Sbjct: 106 ERGIHPENWTLSNIGYMREQMKKLGFSYDWDREVATCLPDYYKWTQWLFLKLYENGLAYK 165 Query: 122 G-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 W N+ + DG+ + H+P++ E E +FF+++AY + Sbjct: 166 KRAKVNWCPHCKTVLANEQVI----DGKCWRC-HSPIEKREIEQWFFKITAYAE 214 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 39/245 (15%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA-------NLPLP-KKVFSHGFILHK 299 D A++W P D+++ G + H +Y F+ A + P K+F+ G + Sbjct: 533 DKELAQYWMPVDIYIGGVEHAVLHLLY-SRFITKALKDMGYVTISEPFSKLFTQGMVTLG 591 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN-----ADL 354 G +SKS GN++DP +++ + G DA R + + KD + + GL+ V + Sbjct: 592 GSAMSKSKGNIVDPDDILRDYGADAARMYTLFVAPPEKDFEWSQQGLEGIVRFIRRIWNF 651 Query: 355 ANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHR 412 + V +V+ + K ++GM +E DE L +R++ + E+++ N + Sbjct: 652 YCKYADEVKEAVAAPMGKLFEGM-------SEYDEKALRAVNRLVYRVTEDIEDNYRFNT 704 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 A+A ++ ++EV Y ++ S+ + T ++ A +L FVP LA + Sbjct: 705 AIAAMMEFLNEVTDY-------------DEKVSSAVMKT--LLETFAKVLAPFVPFLAEE 749 Query: 473 IFDIL 477 ++ +L Sbjct: 750 LWAML 754 >gi|331265790|ref|YP_004325420.1| Valyl-tRNA synthetase [Streptococcus oralis Uo5] gi|326682462|emb|CBZ00079.1| Valyl-tRNA synthetase [Streptococcus oralis Uo5] Length = 883 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TDRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ + E + +V+ + Sbjct: 559 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEQATANVEKVINK 603 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ ++ I L + I V+E Sbjct: 604 EAGNVTDRWILHNLNETIGKVTE 626 Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 88 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 89 ATQAKVEERLR 99 >gi|317009763|gb|ADU80343.1| valyl-tRNA synthetase [Helicobacter pylori India7] Length = 872 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/116 (38%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN + N VS Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKLFNAVS 590 Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + D+LAR+ R+DG L+ G D G Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90 >gi|315635076|ref|ZP_07890356.1| leucine--tRNA ligase [Aggregatibacter segnis ATCC 33393] gi|315476197|gb|EFU66949.1| leucine--tRNA ligase [Aggregatibacter segnis ATCC 33393] Length = 862 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + + YP+ + H+GH I DV++R+ R+ G +VL G D G AA Sbjct: 32 KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N ++ +L SY D + T ++ + + ++ KG +YK Sbjct: 92 KNNTAPAKWTYENIEYMKNQLQLLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + D+ +++V++G + PV+ E +F +++ Y ++LL+ + Sbjct: 152 KTSTVNWCPNDKTVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLNCLD 207 Query: 182 SHPEF 186 P++ Sbjct: 208 DLPQW 212 >gi|315303316|ref|ZP_07873947.1| valyl-tRNA synthetase [Listeria ivanovii FSL F6-596] gi|313628314|gb|EFR96816.1| valyl-tRNA synthetase [Listeria ivanovii FSL F6-596] Length = 882 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 8/179 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D + F+P + V G DI+ F + + + + Sbjct: 449 VLDTWFSSALWPFSTMGWPDTENPDYKHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 508 Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG + +G K+SKSLGN +DPIEVI++ G D+LRY L + G+D + Sbjct: 509 PF-KDTLIHGLVRDAEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSF 567 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEI 401 + ++ N N I N SR V M L D I SD+ IL+ + +Q + Sbjct: 568 EKVESTWN--FINKIWN-ASRFVLMNLNDMKYNEIDLTNVTEVSDKWILTRLNETIQSV 623 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 44 SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 98 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ D SR NF Y DFIR T + D Sbjct: 99 EAKLKEDNISRYDLGRDNFIKKTWEWKEEYADFIREQWEKLGLGLDYSRERFTLDDGLSD 158 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + ++ K+ +KG IY+G Y W A + + ++K +G +Y+ ++ Sbjct: 159 AVKKVFVKLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGNFYHLKY 209 >gi|312882703|ref|ZP_07742440.1| leucyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] gi|309369664|gb|EFP97179.1| leucyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] Length = 857 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 112/258 (43%), Gaps = 25/258 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV+ARF RL G +V+ G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVMQPIGWDAFGLPAENAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N ++ +L YD +F T + ++ + + K+ +KG +Y Sbjct: 92 KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K S + D+ +++V DG + PV+ E +F +++AY +LL Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAYAQELLDDL 206 Query: 181 ESH---PEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231 + PE + ++R R+E + F G +DL + PD + YV Sbjct: 207 DKLDGWPEMVKTMQRNWIGRSEGVELKFEVPGHQDLEVYTTR-------PDTLMGVTYVG 259 Query: 232 IDALTNYLTTTGYLDNPD 249 I A + L T +NP+ Sbjct: 260 I-AAGHPLATIAAQNNPE 276 >gi|208435048|ref|YP_002266714.1| valyl-tRNA synthetase [Helicobacter pylori G27] gi|208432977|gb|ACI27848.1| valyl-tRNA synthetase [Helicobacter pylori G27] Length = 872 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/116 (38%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN + N VS Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKLFNAVS 590 Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust. Identities = 17/35 (48%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + DVLAR+ R+DG L+ G D G Sbjct: 56 HIGHALTLSLQDVLARYKRMDGYKTLYQPGLDHAG 90 >gi|189485558|ref|YP_001956499.1| valyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287517|dbj|BAG14038.1| valyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 883 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 109/231 (47%), Gaps = 16/231 (6%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----KVFSHGFILHK-GEKISKSLG 308 F+PA + G +I+ W A ++ L K VF HG + K G+K+SKSLG Sbjct: 480 FYPASVLATGHEIIYL----WVARMVQFGLEFMKDVPYSNVFIHGIVRDKNGKKMSKSLG 535 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 NV++P +++++ G DALR+ L + A G+D ++ N AN I N SR + + Sbjct: 536 NVVNPGDIMDKYGTDALRFALAQVAAPGRDMQISEESFLAARN--FANKIWN-ASRFIII 592 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDR 426 +D + F +DE I++ + +++ + ++ I A ++ D Sbjct: 593 NSQDISELDKNIQTFELADEWIIAEFAATASKVKADYESYNIDSAAREIYDFFWTKYCDW 652 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y + K + + + VL + V V++ L+ +P +A +I+ IL Sbjct: 653 YVELSKI-RIMSADLNVKKRVLSILVYVLKSTLQLVSPVMPFIAEEIWRIL 702 Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 H+GHA + + D++ RF +L G + L+ GTD G Sbjct: 49 HMGHALNVTLQDIIIRFKKLKGYNTLWVPGTDHGG 83 >gi|71911105|ref|YP_282655.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS5005] gi|71853887|gb|AAZ51910.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS5005] Length = 801 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 361 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 416 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G D+LR+FL A G+D Sbjct: 417 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 476 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ + E S ++V Sbjct: 477 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEDAESNVAKVAAS 521 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ +Q I L + I+ V+E Sbjct: 522 EAGNVTDQWILHNLNETIAKVTE 544 >gi|94994796|ref|YP_602894.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS10750] gi|94548304|gb|ABF38350.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS10750] Length = 882 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G D+LR+FL A G+D Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ + E S ++V Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEDAESNVAKVAAS 602 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ +Q I L + I+ V+E Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625 Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 6/65 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 98 Query: 64 NAGVT 68 G+T Sbjct: 99 GQGIT 103 >gi|301154877|emb|CBW14340.1| leucyl-tRNA synthetase [Haemophilus parainfluenzae T3T1] Length = 862 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++R+ R++G +VL G D G AA Sbjct: 32 KEKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMNGKNVLQPIGWDAFGLPAEGAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N ++ +L Y D I T ++ + + ++ KG +YK Sbjct: 92 KNKTAPAKWTYENIEYMKNQLKMLGFGYDWDREIATCSPEYYKWEQWFFTELYKKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + DE +++V++G + PV+ E +F +++ Y ++LL + Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGGLD 207 Query: 182 SHPEF 186 P++ Sbjct: 208 QLPQW 212 >gi|15675460|ref|NP_269634.1| valyl-tRNA synthetase [Streptococcus pyogenes M1 GAS] gi|81533485|sp|Q99YS1|SYV_STRP1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|13622652|gb|AAK34355.1| putative valine-tRNA ligase [Streptococcus pyogenes M1 GAS] Length = 882 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G D+LR+FL A G+D Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ + E S ++V Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEDAESNVAKVAAS 602 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ +Q I L + I+ V+E Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625 Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 88 ATQAKVEERLR 98 >gi|306826992|ref|ZP_07460290.1| valine--tRNA ligase [Streptococcus pyogenes ATCC 10782] gi|304430738|gb|EFM33749.1| valine--tRNA ligase [Streptococcus pyogenes ATCC 10782] Length = 882 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 442 VLDTWFSSALWPFSTIGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G D+LR+FL A G+D Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ + E S ++V Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEDAESNVAKVAAS 602 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ +Q I L + I+ V+E Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625 Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 88 ATQAKVEERLR 98 >gi|171920261|ref|ZP_02691263.2| valyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171902665|gb|EDT48954.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813] Length = 874 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/236 (27%), Positives = 112/236 (47%), Gaps = 31/236 (13%) Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSL 307 +++P L V G DIL F W + +++ + L +K V HG I +G K+SKSL Sbjct: 473 RYFPTSLIVTGMDILFF----WVSRMMNFSQYLVEKKPFKDVLIHGLIRDSQGRKMSKSL 528 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA-----DLANGIGNLV 362 GN IDP ++I++ G+DA+R F G+D + + L N ++A I NL Sbjct: 529 GNGIDPFDIIDKYGLDAMRLFFASCTTIGEDLNFSTERLGANWNYLNKIWNIAKYIENLD 588 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV- 421 + ++ +D D F + ++ IL+ S++ EI +NM + A + + Sbjct: 589 EINDNLNFEDVD-------KFCDVNKWILTELSKLTLEINKNMDKYNLVVATKYLYDFIW 641 Query: 422 -SEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + Y + K +L N + T+ Y V ++ I+LQ F P ++ +I+ Sbjct: 642 NTFASYYLEYTKVLLQDLTLKN-ETIKTIRY----VFNKILIMLQPFAPNISEEIW 692 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHAY+ ++D+L R+ +L G D GTD G Sbjct: 53 HIGHAYDFTLSDILMRYKKLKGYDSFIIPGTDHAG 87 >gi|163857126|ref|YP_001631424.1| isoleucyl-tRNA synthetase [Bordetella petrii DSM 12804] gi|254782369|sp|A9IRC2|SYI_BORPD RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|163260854|emb|CAP43156.1| ileS [Bordetella petrii] Length = 953 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 15/203 (7%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284 VW D+ T + T G D G WPADL++ G D R FH+ +L Sbjct: 546 VWFDSGTTHATVLGGKDQALGGSHGAELAWPADLYLEGSDQHRGWFHSSLLTGCMLYGQP 605 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K + +HGF++ +G K+SKS+GNVI P +V + +G + LR ++ G+ D+ Sbjct: 606 PY-KALLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGELSISDE 664 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM---IPTPGAFTESDESILSVCSRVLQE 400 + KRV + I N + R + + D+D + +P G E D L++ +++ E Sbjct: 665 --ILKRV-VEGYRRIRNTL-RFLLANVADFDAVSQAVPY-GELFEIDRYALTMTAQMQAE 719 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 + + + H A++++ + SE Sbjct: 720 VLAHYERYDFHPAVSRLQTFCSE 742 Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust. Identities = 16/57 (28%), Positives = 26/57 (45%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58 + R + + Y N HIGHA ++ D++ + + G D + G D HG I Sbjct: 45 RGRPRFVLHDGPPYANGDIHIGHAVNKVLKDIIVKSRNMAGYDAHYVPGWDCHGMPI 101 >gi|313890366|ref|ZP_07823997.1| leucine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] gi|313121209|gb|EFR44317.1| leucine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] Length = 833 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 14/197 (7%) Query: 4 REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + K Y YP+ A H+GH D+L+RF R G +VL G D G + A Sbjct: 31 KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N NF+ + L SY D I TT+ ++ + ++ K+ +KG Y Sbjct: 91 MDTGNDPAAFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGLAY 150 Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 + W A N++ + G G Y + QWM +++AY ++LL Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204 Query: 178 SYYES--HPEFILPIER 192 E PE I ++R Sbjct: 205 EDLEEVDWPESIKDMQR 221 >gi|13357827|ref|NP_078101.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762145|ref|YP_001752350.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|183508747|ref|ZP_02958221.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701957|ref|ZP_02971594.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|12585354|sp|Q9PQM4|SYV_UREPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|11271419|pir||E82913 valyl-tRNA synthetase UU267 [imported] - Ureaplasma urealyticum gi|6899238|gb|AAF30676.1|AE002123_9 valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827722|gb|ACA32984.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|182675679|gb|EDT87584.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700717|gb|EDU18999.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 874 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/236 (27%), Positives = 112/236 (47%), Gaps = 31/236 (13%) Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSL 307 +++P L V G DIL F W + +++ + L +K V HG I +G K+SKSL Sbjct: 473 RYFPTSLIVTGMDILFF----WVSRMMNFSQYLVEKKPFKDVLIHGLIRDSQGRKMSKSL 528 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA-----DLANGIGNLV 362 GN IDP ++I++ G+DA+R F G+D + + L N ++A I NL Sbjct: 529 GNGIDPFDIIDKYGLDAMRLFFASCTTIGEDLNFSTERLGANWNYLNKIWNIAKYIENLD 588 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV- 421 + ++ +D D F + ++ IL+ S++ EI +NM + A + + Sbjct: 589 EINDNLNFEDVD-------KFCDVNKWILTELSKLTLEINKNMDKYNLVVATKYLYDFIW 641 Query: 422 -SEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + Y + K +L N + T+ Y V ++ I+LQ F P ++ +I+ Sbjct: 642 NTFASYYLEYTKVLLQDLTLKN-ETIKTIRY----VFNKILIMLQPFAPNISEEIW 692 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHAY+ ++D+L R+ +L G D GTD G Sbjct: 53 HIGHAYDFTLSDILMRYKKLKGYDSFIIPGTDHAG 87 >gi|125973752|ref|YP_001037662.1| leucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|256004483|ref|ZP_05429462.1| leucyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|281417908|ref|ZP_06248928.1| leucyl-tRNA synthetase [Clostridium thermocellum JW20] gi|166231601|sp|A3DEU0|SYL_CLOTH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|125713977|gb|ABN52469.1| leucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|255991488|gb|EEU01591.1| leucyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|281409310|gb|EFB39568.1| leucyl-tRNA synthetase [Clostridium thermocellum JW20] gi|316940054|gb|ADU74088.1| leucyl-tRNA synthetase [Clostridium thermocellum DSM 1313] Length = 825 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 36/244 (14%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPLP--------KKVFSHGFILHK 299 D + ++W P D ++ G + H +Y FL+ L + + G +L Sbjct: 519 DKERIRYWLPVDQYIGGVEHAILHLLY-SRFLMKVLYDLGYVDYDEPFTNLLTQGMVLKD 577 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKSLGNV+ P E+IE+ G D R F++ KD + G++ G Sbjct: 578 GAKMSKSLGNVVSPEEIIEKYGADTARLFILFASPPEKDLEWSDQGVE---------GCY 628 Query: 360 NLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSVCSRVLQEIRENMQNQL-IHRA 413 ++R V I+ ++ + G FT++D+ + + + L+ + +++ + + A Sbjct: 629 RFINR-VWRIVNEFADAVKEGGNIDTSTFTKADKELWYMLNNTLKRVTDDISQRFNFNTA 687 Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473 ++ V+ LV+ + Y D K D + L EVI +L I+L F+P ++ Sbjct: 688 ISAVMELVNSLYYYKD--------KVADDSKNKAL--VREVIEKLIIMLAPFIPHATEEL 737 Query: 474 FDIL 477 + + Sbjct: 738 WSAI 741 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 43/91 (47%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + ++K Y+ YP+ H+GH I DV+ARF R++G +VL G D G A Sbjct: 28 ESKKKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKRMNGFNVLHPMGWDAFGLPAENA 87 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92 A GV + N N R L ISYD Sbjct: 88 AIKRGVHPNDWTWSNIDNMRRQLKQLGISYD 118 >gi|329928481|ref|ZP_08282349.1| valine--tRNA ligase [Paenibacillus sp. HGF5] gi|328937740|gb|EGG34148.1| valine--tRNA ligase [Paenibacillus sp. HGF5] Length = 889 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 8/179 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANL 284 ++ W + +T G+ D +++P + V G DI+ F + + + + Sbjct: 457 VLDTWFSSALWPFSTMGWPDLDSEDFKRYYPTSVLVTGYDIIPFWVSRMIFQGLEFTGQM 516 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG + +G K+SKSLGN IDP+EVIE+ G DA+RY + G+D + Sbjct: 517 PF-KDTLIHGLVRDSEGRKMSKSLGNGIDPLEVIEQYGADAMRYMISTGSTPGQDLRFRW 575 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEI 401 + +++ N AN I N SR M L+ + I G +D IL + ++I Sbjct: 576 ERVEQARN--FANKIWN-ASRFALMNLEGFTVADIDISGELGTADRWILHRLNETSRDI 631 Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 21/154 (13%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-------- 68 HIGHA + + D+L R R+ G D L+ G+D G K+ + + GVT Sbjct: 60 HIGHALDFTLQDILIRVKRMQGYDALWLPGSDHAGIATQTKVEQKLREEGVTRYDLGREK 119 Query: 69 --TKV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRILWKKISDKGDIYK 121 KV + D + RD + +S D+ R T ++ + R ++ K+ DKG IY+ Sbjct: 120 FLEKVWEWKDLYANTIRDQWSKIGLSL-DYSRERFTLDEGLSEAVREVFVKLYDKGLIYR 178 Query: 122 GCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 G + +D EV YK +G Y+ Q+ Sbjct: 179 GKRIINWDPAARTALSDIEVEYKEVNGHLYHLQY 212 >gi|220929274|ref|YP_002506183.1| isoleucyl-tRNA synthetase [Clostridium cellulolyticum H10] gi|219999602|gb|ACL76203.1| isoleucyl-tRNA synthetase [Clostridium cellulolyticum H10] Length = 929 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 10/107 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 IM VW D+ ++++ L+N +G WPADL++ G D R F + + Sbjct: 530 IMDVWFDSGSSHVAV---LENREGLS---WPADLYLEGNDQHRGWFQSSLLTSVATKGTA 583 Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 P +KV +HG+++ +G K+SKSLGN IDP +VI+E G D LR ++ Sbjct: 584 PY-RKVLTHGYVVDGEGRKMSKSLGNGIDPADVIKEYGADILRLWVA 629 >gi|78186274|ref|YP_374317.1| valyl-tRNA synthetase [Chlorobium luteolum DSM 273] gi|78166176|gb|ABB23274.1| valyl-tRNA synthetase [Chlorobium luteolum DSM 273] Length = 901 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 50/280 (17%) Query: 227 IMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 ++ W + LTT G+ DN D F+P D V G DI+ F W A ++ A Sbjct: 458 VLDTWFSSWLWPLTTLGWTGPKSDNED--LRAFYPTDTLVTGPDIIFF----WVARMIMA 511 Query: 283 NL------PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 + P F+ KG K+SKSLGN DP++VI+ G DALR+ ++ G Sbjct: 512 GMYFKGDVPFRDVYFTSIIRDMKGRKLSKSLGNSPDPLKVIDTYGTDALRFTIIYIAPLG 571 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSM-----------ILKDYDGMIPTPGAFTE 385 +D + ++ K + + A I N SR V M + Y+G P+ +F Sbjct: 572 QDVLFGEE--KCELGRNFATKIWN-ASRLVFMQREKHFEGPEDFARYYEGFDPSLESFDM 628 Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQ-----VISLVSE------VDRYFDAQKPW 434 + ILS + +L+ H A AQ ++ V E D Y +A K Sbjct: 629 AGRWILSSYNAMLER---------YHAAFAQFRMNDIVKTVYEFFWGDYCDWYLEALKVT 679 Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + +P A + + V V+ L +P + ++I+ Sbjct: 680 LAEGCSPVDARKAVALAVHVLEGSLKALHPVMPFITDEIW 719 >gi|312864725|ref|ZP_07724956.1| valine--tRNA ligase [Streptococcus downei F0415] gi|311099852|gb|EFQ58065.1| valine--tRNA ligase [Streptococcus downei F0415] Length = 883 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 19/200 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + + Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K V HG I +G K+SKSLGN IDP++VI++ G DALR+FL A G+D + Sbjct: 503 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVRFSY 561 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403 + + N N I N +SR IL + +G+ DE+ +V E Sbjct: 562 EKMDASWN--FINKIWN-ISR---YILMNNEGL--------SLDEATTNVAKVAASEAG- 606 Query: 404 NMQNQLIHRALAQVISLVSE 423 N+ ++ I L + I+ V+E Sbjct: 607 NVTDRWILHNLNETIAKVTE 626 Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107 G+T TKV + D+ + ++ M +D S + F T ++ R Sbjct: 100 GEGITRYDLGRESFLTKVWEWKDEYAATIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|213966169|ref|ZP_03394355.1| valyl-tRNA synthetase [Corynebacterium amycolatum SK46] gi|213951184|gb|EEB62580.1| valyl-tRNA synthetase [Corynebacterium amycolatum SK46] Length = 911 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 75/290 (25%), Positives = 124/290 (42%), Gaps = 50/290 (17%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLL 280 DP ++ W + +T G+ P+ + KF+P + V G DIL +W A ++ Sbjct: 452 DPD-VLDTWFSSALWPFSTMGW---PEATPELEKFYPTSVLVTGYDIL----FFWVARMM 503 Query: 281 -----SANLP-------------LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV 320 +ANLP +P K VF HG + +G K+SKSLGN IDP++ + + Sbjct: 504 MFSTFAANLPDSPLGKGRDGRPQVPFKDVFLHGLVRDEQGRKMSKSLGNGIDPLDWVRDY 563 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 G DALR+ L R G D D + N A + N + +++ + G +P Sbjct: 564 GADALRFTLARGANPGSDLPVGNDAAQSSRN--FATKLFN--ATRFALMNGAHMGELPDR 619 Query: 381 GAFTESDESILSVCSRVLQEIRENM--------QNQLIHRALAQVISL---VSEVD--RY 427 T++D IL +V E+ + L H A +V +++VD R Sbjct: 620 DQLTDTDRWILDRLEQVRAEVDSALDRYEFSKANEALYHFAWDEVCDWYLEMTKVDFPRL 679 Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D + + + RA++ V V+ L LL +P + ++ L Sbjct: 680 NDGET---MTEEQAARAASTRLVLGRVLDTLLRLLHPSMPFVTETLWKAL 726 >gi|194290700|ref|YP_002006607.1| leucyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424] gi|193224535|emb|CAQ70546.1| leucine tRNA synthetase [Cupriavidus taiwanensis LMG 19424] Length = 879 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 10/181 (5%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 KE+ K Y + + YP+ + H+GH I DV+AR+ R++G +VL G D G A Sbjct: 42 KEKPKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGNNVLMPMGWDAFGMPAENA 101 Query: 62 AQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117 A N GV + N + + M +D S + + T ++ + L+ K+ +KG Sbjct: 102 ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYRWNQWLFLKMLEKG 159 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y+ + + D+ +++V DG+ + + V+ E Y+ R++ Y ++LL Sbjct: 160 IAYRKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAV-VEKREIPMYYLRITEYAEELL 215 Query: 178 S 178 Sbjct: 216 G 216 >gi|117619872|ref|YP_857738.1| leucyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561279|gb|ABK38227.1| leucyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 910 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 9/195 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++EK Y + YP+ + H+GH I DV++R+ RL+G +VL G D G AA Sbjct: 82 DKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLNGKNVLQPIGWDAFGLPAENAA 141 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N ++ +L + Y D + T + ++ + + K+ +KG +Y Sbjct: 142 IKNNTAPAPWTYENIEYMKNQLKMLGLGYDWDRELATCKPDYYRWEQWFFTKLYEKGLVY 201 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178 K S + D +++V D + PV+ E +F +++ Y ++LL+ Sbjct: 202 KKTSSVNWCPNDMTVLANEQV---VDNCCWRCD-TPVEQKEIPQWFIKITDYAEELLNDI 257 Query: 179 -YYESHPEFILPIER 192 E PE + ++R Sbjct: 258 DNLEGWPEMVKTMQR 272 >gi|13474936|ref|NP_106506.1| tRNA synthetase [Mesorhizobium loti MAFF303099] gi|14025692|dbj|BAB52292.1| mlr5926 [Mesorhizobium loti MAFF303099] Length = 581 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 77/311 (24%), Positives = 118/311 (37%), Gaps = 38/311 (12%) Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL--------HVIGKD 266 DWG+ P + +VW + +L L S + W A L H G D Sbjct: 267 DWGLPAEGFPGQVTWVWPEMAFGFLYNIQTLAT---SLGRHWNAALPSKDWQIVHFFGFD 323 Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSH----------GFILHKGEKISKSLGNVIDPIEV 316 +HA+ +PA L +VFSH F L G+K S S + + EV Sbjct: 324 NSFYHALLYPA--------LYAEVFSHWTPRIRYHVNEFYLLDGQKFSTSRSHAVWGKEV 375 Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376 + + VD +R L G+ + D L++ N N + I +D+ G Sbjct: 376 LGQKTVDVVRLHLGLTRPEGERTNFTLDALRRTENEVFQGIWLNWLDALHGEIKQDFGGC 435 Query: 377 IPTPGAFTESDESILSVCS--RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434 +P G + +D + R E + + RA AQ VS+ Y AQ Sbjct: 436 VPDAGDWAPADRAFFGRIEIHRAAMERAYSDDGFSVRRAAAQACDFVSDCVVYRRAQDYE 495 Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF-DILFVADENRCFQSLDQRL 493 ++ P R T L + LA L +P+ A+ + I V+ E + + +RL Sbjct: 496 AARRLYPARTRTSLALQTTAAAILAQTLAPLMPRFASTLARGIDGVSTET--WPTSVRRL 553 Query: 494 KPGFMLHKTFD 504 PG TFD Sbjct: 554 APG----TTFD 560 Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 1/95 (1%) Query: 4 REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R +++ + PN H+GH + + ADV RF R+ G++ TG+D++ +A A Sbjct: 34 RGPIFVFSTPPTPNGDLHLGHLSGPYLGADVYTRFLRMKGVEAYHLTGSDDYQSYVATRA 93 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97 T + R +LD F+ T Sbjct: 94 DAEQSTPGKVARHYADEIRATLALLDCEVHSFLPT 128 >gi|303231424|ref|ZP_07318155.1| leucine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] gi|302513861|gb|EFL55872.1| leucine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] Length = 822 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 8/174 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + +EK Y YP+ H+GH I DV+ARF +++G +VL G D G A Sbjct: 30 ESKEKYYALEMFPYPSGNLHMGHVRNYSIGDVVARFKKMNGFNVLHPMGWDSFGMPAENA 89 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119 A G+ K + N N + L +SY D + T ++ ++ + +++ KG Sbjct: 90 AIKHGIAPKTWTLDNIENMKKQQKALGLSYDWDREVATCKEDYYKWTQWFFEQFYKKGLA 149 Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 YK W N+ + DG + NPV+ + +F R++ Y Sbjct: 150 YKKEAKVNWCETCHTVLANEQVI----DGLCWRCD-NPVEKKDLSQWFLRITEY 198 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 74/313 (23%), Positives = 134/313 (42%), Gaps = 43/313 (13%) Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWIDALTNYL 239 PE LP+ R E + F + L+ S + P M +ID+ +L Sbjct: 450 PEEELPV-RLPEDVKFESGAVSPLATSEAFMNAKCPKCGGPARRETDTMDTFIDSSWYFL 508 Query: 240 TTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLP 287 T L++ D A +W D ++ G + H +Y F L+ AN P Sbjct: 509 RYTDALNDKAPFDSKIANYWMNVDQYIGGIEHAILHLLYSRFFVKVIHDLGLIEANEPF- 567 Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 + + + G +L +G K+SKS GNV+ P E+I + G D R F++ +D + G++ Sbjct: 568 RGLLTQGMVLKEGSKMSKSKGNVVSPEEIINKYGADTARLFILFAAPVDRDLDWSDQGVE 627 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENM 405 G + R V I+ YD G T+ + ++ RV++++ E++ Sbjct: 628 ---------GSYRFLGR-VWRIVDAYDQAAKENHTGDLTKDEVALRRELHRVIKKVTEDL 677 Query: 406 QNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 N + A++ ++ LV+ + + D + + N D A+ E+ L +LL Sbjct: 678 DNNFNFNTAISAIMELVNAMYAHKD-----KAESVNADLAN-------ELTHNLVLLLAP 725 Query: 465 FVPKLANKIFDIL 477 FVP + +++ L Sbjct: 726 FVPHITEELWHEL 738 >gi|291001311|ref|XP_002683222.1| predicted protein [Naegleria gruberi] gi|284096851|gb|EFC50478.1| predicted protein [Naegleria gruberi] Length = 487 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/269 (21%), Positives = 112/269 (41%), Gaps = 30/269 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + + I++A+ Y N PH+G+ ++ ADV +R+ + G + L+ GTDE+G A Sbjct: 17 QRNILITSALPYVNNYPHLGNIVGAVLSADVFSRYCKQKGYNTLYICGTDEYGTATETKA 76 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 T + + + + + + DI +D F RT+ K+ + + ++ K+ G + + Sbjct: 77 FQEKTTPEAICAKYYQLHKQVYEWFDIDFDHFGRTSTKQQTEIAQDIFLKLHQNGFLTEK 136 Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWM----------- 160 Y + + D V Y+ A G + NP + + Sbjct: 137 TIEQLYDEESKTFLADRFVKGTCPTCLYEDARGDQCDKCGKLLNPTELINPRSTTTGSVP 196 Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFI-LPIERRNEVISFVKSGLKDLSLSRKTFDW 216 E F +L Q K +++++ + R+ S+ GL++ ++R W Sbjct: 197 IIKETNHIFIKLQDLQHKTKEWFQNNKDTAQWTTVARSITQSWFDKGLEERCITRD-LKW 255 Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTG 243 G +P + + YVW DA Y++ T Sbjct: 256 GTPVPLEKFADKVFYVWFDAPIGYISITA 284 >gi|325577505|ref|ZP_08147867.1| leucine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] gi|325160609|gb|EGC72733.1| leucine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] Length = 862 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++R+ R++G +VL G D G AA Sbjct: 32 KEKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMNGKNVLQPIGWDAFGLPAEGAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N ++ +L Y D I T ++ + + ++ KG +YK Sbjct: 92 KNKTAPAKWTYENIEYMKNQLKMLGFGYDWDREIATCRPEYYKWEQWFFTELYKKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + DE +++V++G + PV+ E +F +++ Y ++LL + Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGGLD 207 Query: 182 SHPEF 186 P++ Sbjct: 208 QLPQW 212 >gi|308062430|gb|ADO04318.1| valyl-tRNA synthetase [Helicobacter pylori Cuz20] Length = 872 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN I N VS Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSIAHLEN--NKNFANKIFNAVS 590 Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + D+LAR+ R+DG L+ G D G Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90 >gi|319651731|ref|ZP_08005857.1| valyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] gi|317396550|gb|EFV77262.1| valyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] Length = 881 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/270 (22%), Positives = 115/270 (42%), Gaps = 44/270 (16%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F ++ D+ ++ + ER + ++D +SR+ + WG +IP Sbjct: 364 WFVKMQPLADEAIALQTKEEKVNFVPERFEKTYLRWMENIRDWCISRQLW-WGHRIPAWY 422 Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 + + ++ W + +T G+ D +++P Sbjct: 423 HKETGEVFVGHEAPEDIENWEQDKDVLDTWFSSALWPFSTMGWPDTDSSDFKRYYPTAAL 482 Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIE 315 V G DI+ F W + ++ L + V HG + +G K+SKSLGN +DP++ Sbjct: 483 VTGYDIIFF----WVSRMIFQGLEFTGERPFQDVLIHGLVRDSQGRKMSKSLGNGVDPMD 538 Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375 VI++ G D+LRYFL + G+D + + ++ N AN I N + L + DG Sbjct: 539 VIDQYGADSLRYFLSTGSSPGQDLRFSMEKVEATWN--FANKIWN----ASRFALMNMDG 592 Query: 376 M----IPTPGAFTESDESILSVCSRVLQEI 401 + I G + +D+ IL+ + ++ + Sbjct: 593 LTYEEIDLSGEKSVADKWILTRLNETIETV 622 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 47/179 (26%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 + I PN + H+GHA++ + D+L R R+ G DVL+ G D +AG+ Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYDVLWLPGMD-----------HAGI 91 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK---RHHDTCRILWKKIS---------- 114 T+ V++ RN D D+ + F+ T K + R W K+ Sbjct: 92 ATQAKVEEKLRN--DGKSRYDLGREKFVEETWKWKEEYASHIRQQWSKLGLGLDYSRERF 149 Query: 115 ------------------DKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 +KG IY+G Y W A + + +YK G +Y+ ++ Sbjct: 150 TLDEGLSKAVREVFVSLYNKGLIYRGEYIINWDPSTKTALSDIEVIYKDVQGAFYHMRY 208 >gi|313618762|gb|EFR90666.1| valyl-tRNA synthetase [Listeria innocua FSL S4-378] Length = 882 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D + F+P + V G DI+ F + + + + Sbjct: 449 VLDTWFSSALWPFSTMGWPDTENPDYKHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 508 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG + +G K+SKSLGN +DPIEVI++ G D+LRY L + G+D + Sbjct: 509 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSF 567 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399 + ++ N N I N SR V M L DGM I SD+ IL+ + +Q Sbjct: 568 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYDEIDLSNVTEVSDKWILTRLNETIQ 621 Query: 400 EI 401 + Sbjct: 622 AV 623 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 44 SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 98 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ + SR F D Y DFIR T + D Sbjct: 99 EAKLKEENISRYDLGREKFVDKTWEWKEEYADFIREQWEKLGLGLDYSRERFTLDAGLSD 158 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + ++ + +KG IY+G Y W A + + ++K +G +Y+ ++ Sbjct: 159 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 209 >gi|296444651|ref|ZP_06886615.1| valyl-tRNA synthetase [Methylosinus trichosporium OB3b] gi|296257919|gb|EFH04982.1| valyl-tRNA synthetase [Methylosinus trichosporium OB3b] Length = 904 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 112/266 (42%), Gaps = 33/266 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 ++ W + +T G+ PD +K +F+P ++ V G DI+ +W A ++ L Sbjct: 474 VLDTWFSSALWPFSTLGW---PDETKELERFYPTNVLVTGFDII----FFWVARMMMMGL 526 Query: 285 PLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 K+V H +H KG K+SKS GNVIDP+ +I + G DALR+ L A G+D Sbjct: 527 YFKKEVPFHDVYIHALVRDEKGAKMSKSKGNVIDPLHLINDYGADALRFTLAAMAAQGRD 586 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDES-----ILS 392 ++ G N ++ + + +G PG +E I+S Sbjct: 587 ---------IKLATQRVEGYRNFATKLWNASRFAEINGCARVPGYDPARNEITLNRWIVS 637 Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYV 450 +R +EI ++ + A V V D Y + KP L+ + Sbjct: 638 EAARAAEEIGAAIEAYRFNDAAGAAYRFVWNVFCDWYLELAKPL-LQGEDGAAKDETRAA 696 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDI 476 + Q+ LL F+P L +++ + Sbjct: 697 AAFTLDQIYALLHPFMPFLTEELWGV 722 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 13/69 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA + D+LAR+ R+ G DVL+ GTD +AG+ Sbjct: 38 SIVIPPPNVTGSLHMGHALNNTLQDILARYQRMRGRDVLWQPGTD-----------HAGI 86 Query: 68 TTKVFVDQN 76 T++ V++ Sbjct: 87 ATQMVVERK 95 >gi|16800655|ref|NP_470923.1| valyl-tRNA synthetase [Listeria innocua Clip11262] gi|81526882|sp|Q92BG2|SYV_LISIN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|16414074|emb|CAC96818.1| valyl-tRNA synthetase [Listeria innocua Clip11262] Length = 882 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D + F+P + V G DI+ F + + + + Sbjct: 449 VLDTWFSSALWPFSTMGWPDTENPDYKHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 508 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG + +G K+SKSLGN +DPIEVI++ G D+LRY L + G+D + Sbjct: 509 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSF 567 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399 + ++ N N I N SR V M L DGM I SD+ IL+ + +Q Sbjct: 568 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYDEIDLSNVTEVSDKWILTRLNETIQ 621 Query: 400 EI 401 + Sbjct: 622 AV 623 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 44 SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 98 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ + SR F D Y DFIR T + D Sbjct: 99 EAKLKEENISRYDLGREKFVDKTWEWKEEYADFIREQWEKLGLGLDYSRERFTLDAGLSD 158 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + ++ + +KG IY+G Y W A + + ++K +G +Y+ ++ Sbjct: 159 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 209 >gi|302540507|ref|ZP_07292849.1| putative methionyl-tRNA synthetase [Streptomyces hygroscopicus ATCC 53653] gi|302458125|gb|EFL21218.1| putative methionyl-tRNA synthetase [Streptomyces himastatinicus ATCC 53653] Length = 526 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 98/452 (21%), Positives = 177/452 (39%), Gaps = 53/452 (11%) Query: 7 LYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 L+I+ + + HIGH A + ADVL+R R DG VLF+TGT +H + + A A Sbjct: 5 LWITATPPATHGELHIGHLAGPYVAADVLSRHLRADGRPVLFSTGTADHTESVELRALRA 64 Query: 66 G------------------VTTKVFVDQNSRNFRDMAD-------VLDISYDDFIRTTEK 100 G + + V D + RD LD+ D I Sbjct: 65 GRKPEEVAEGYRVAITADWLRSGVEFDHIVQPRRDRGYQRWVQNLFLDLYGQDVI-VART 123 Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQ 158 R H C + + G G S + D + ++ AD +P + Sbjct: 124 RLHPFCPSCERWL--HGAFVMGACSACGARADGSLCHECARPTDADLIDPVCALCGSPGE 181 Query: 159 WMEEEGYFFRLSAYQDKLLSYY---ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215 + L ++ L ++ ES P E S ++ GL ++++ D Sbjct: 182 RHRCRRLYLPLEPLRESLADHWASTESSPRLAALWE------SLLEDGLPEVAVGHPG-D 234 Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273 WG+ +P D + + +A+ +L GY P +A +H HA+ Sbjct: 235 WGVPVPVDDFRHHRIDACFEAVVMHLFGYGYDHKPLPERA------VHFCEFGHAFCHAV 288 Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV-IDPIEVIEEVGVDALRYFLVRE 332 PA L++ + LP++++ + E+ G + ++++ E G D LR ++ E Sbjct: 289 LLPAILIARGVKLPQEIYVNETYRVDAERAHGFGGEAGVWALDLLTEFGSDTLRRHVLEE 348 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392 G+ + +D L +R L N ++R + + +D G++P E++ Sbjct: 349 RPHGRRTEFRRDRL-ERTRQVLETTWNNWLTRLFTTVREDCAGVVPDAEPGGTGWEALRR 407 Query: 393 VCSRVLQEIRENMQNQLI--HRALAQVISLVS 422 R +++RE + RA+A + +VS Sbjct: 408 RLYRAAEDLREAYGPEAFDPRRAVAVLDEVVS 439 >gi|229043950|ref|ZP_04191644.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH676] gi|228725390|gb|EEL76653.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH676] Length = 607 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 87 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 145 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++++ G DALR+ LV F Sbjct: 146 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 204 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 205 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 262 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 263 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 319 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 320 TISKLIAPFTPFVAEDI 336 >gi|313623634|gb|EFR93795.1| valyl-tRNA synthetase [Listeria innocua FSL J1-023] Length = 874 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D + F+P + V G DI+ F + + + + Sbjct: 441 VLDTWFSSALWPFSTMGWPDTENPDYKHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 500 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG + +G K+SKSLGN +DPIEVI++ G D+LRY L + G+D + Sbjct: 501 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSF 559 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399 + ++ N N I N SR V M L DGM I SD+ IL+ + +Q Sbjct: 560 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYDEIDLSNVTEVSDKWILTRLNETIQ 613 Query: 400 EI 401 + Sbjct: 614 AV 615 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 36 SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 90 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ + SR F D Y DFIR T + D Sbjct: 91 EAKLKEENISRYDLGREKFVDKTWEWKEEYADFIREQWEKLGLGLDYSRERFTLDAGLSD 150 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + ++ + +KG IY+G Y W A + + ++K +G +Y+ ++ Sbjct: 151 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 201 >gi|196045992|ref|ZP_03113220.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108] gi|196023047|gb|EDX61726.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108] Length = 1033 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 126/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 P K+V S G +L +G+K+SKS GN +DP++++E+ G DALR+ LV F Sbjct: 572 APY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLINVYSFYVLYANLDEYNPHETYDVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I DV+AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|319892709|ref|YP_004149584.1| Valyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] gi|317162405|gb|ADV05948.1| Valyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] gi|323464257|gb|ADX76410.1| valyl-tRNA synthetase [Staphylococcus pseudintermedius ED99] Length = 876 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 38/218 (17%) Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 +F +++ ++ L+ +++ EF+ P R + + ++D ++SR+ + WG +IP Sbjct: 359 WFVKMAPLAEQALNNQKTNGRIEFVPP--RFEKTFNRWMEEIRDWTISRQLW-WGHQIPA 415 Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259 + ++ W + +T G+ + +F+P + Sbjct: 416 WYHNETGELYVGEEAPVDIENWTQDEDVLDTWFSSALWPFSTLGWPNEDAADYQRFYPTN 475 Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFI-LHKGEKISKSLGNVIDP 313 + V G DI+ F W A ++ L + V HG + G K+SKSLGN +DP Sbjct: 476 VLVTGYDIIFF----WVARMIFQGLEFTGQKPFNDVLLHGLVRAEDGRKMSKSLGNGVDP 531 Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351 ++VI++ G D+LRYFL + G D Y + ++ N Sbjct: 532 MDVIDQYGADSLRYFLATGSSPGHDLRYSTEKVESVWN 569 Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust. Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 30/181 (16%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN + H+GHA++ + D+L R R+ G + L+ G D G K+ + Sbjct: 38 TIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYETLYLPGMDHAGIATQAKVEAKMR 97 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTC 106 G++ D F + A Y FIR T + Sbjct: 98 EEGISRH---DIGREKFLEKAWEWKEEYASFIRQQWAKLGLGLDYSRERFTLDSGLSQAV 154 Query: 107 RILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165 R ++ + +KG IY+G W A + + V++ +G++Y H + + EGY Sbjct: 155 RKVFVDMYNKGLIYRGERIINWDPAARTALSDIEVVHEDVNGKFY---HFKYPFADGEGY 211 Query: 166 F 166 Sbjct: 212 M 212 >gi|322385938|ref|ZP_08059579.1| valine--tRNA ligase [Streptococcus cristatus ATCC 51100] gi|321270053|gb|EFX52972.1| valine--tRNA ligase [Streptococcus cristatus ATCC 51100] Length = 883 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ + E + +V+ + Sbjct: 559 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEQATANVEKVVNK 603 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ ++ I L + I V+E Sbjct: 604 EAGNVTDRWILHNLNETIGKVTE 626 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+D+ + M +D S + F T ++ R Sbjct: 100 GEGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|317182405|dbj|BAJ60189.1| valyl-tRNA synthetase [Helicobacter pylori F57] Length = 872 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN I N VS Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSIAHLEN--NKNFANKIFNAVS 590 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75 HIGHA + + D+LAR+ R+DG L+ G D G A QN V K +DQ Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG----IATQN--VVEKQLLDQ 104 >gi|261867173|ref|YP_003255095.1| leucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412505|gb|ACX81876.1| leucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 862 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + + YP+ + H+GH I DV++R+ R+ G +VL G D G AA Sbjct: 32 KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N ++ +L SY D + T ++ + + ++ KG +YK Sbjct: 92 KNNTAPAKWTYENIAYMKNQLQLLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + D+ +++V++G + PV+ E +F +++ Y ++LL+ + Sbjct: 152 KTSTVNWCPNDKTVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLNCLD 207 Query: 182 SHPEF 186 P++ Sbjct: 208 ELPQW 212 >gi|260576328|ref|ZP_05844319.1| valyl-tRNA synthetase [Rhodobacter sp. SW2] gi|259021399|gb|EEW24704.1| valyl-tRNA synthetase [Rhodobacter sp. SW2] Length = 998 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 21/261 (8%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 DP ++ W + + T G+ + P K++P + V G+DIL F W A ++ Sbjct: 566 DPD-VLDTWFSSGLWPIGTLGWPE-PTPELQKYFPTSVLVTGQDILFF----WVARMMMM 619 Query: 283 NLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 L + ++ H LH KG+K+SKSLGNVIDP+E+I++ G DALR+ + G Sbjct: 620 QLAVVGQIPFHTVYLHGLVRDAKGKKMSKSLGNVIDPLEIIDDYGADALRFANAAMASLG 679 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVS-RSVSMILKDYDGMIPTPGAFTESDESILSVCS 395 G D + + + N ++ + + + P A ++ I+ + Sbjct: 680 --GVLKLDTQRIAGYRNFGTKLWNACRFAEMNGVWEGHQTRALPPQAKATVNQWIIGETA 737 Query: 396 RVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 +V E+ + + +A A + + V D Y + KP + D+A+ Sbjct: 738 KVRAEVDAALADYRFDQAAAALYAFVWGKVCDWYVEFAKP----LFDGDQAAETRATMGW 793 Query: 454 VIRQLAILLQAFVPKLANKIF 474 V+ Q ILL +P + +++ Sbjct: 794 VLDQCMILLHPIMPFVTEELW 814 Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75 H+GHA+ + D+L R+HR+ G D L+ G D +AG+ T++ V++ Sbjct: 53 HMGHAFNNTLQDILVRWHRMRGFDTLWQPGQD-----------HAGIATQMVVER 96 >gi|119899504|ref|YP_934717.1| leucyl-tRNA synthetase [Azoarcus sp. BH72] gi|166230607|sp|A1KAH5|SYL_AZOSB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|119671917|emb|CAL95831.1| unnamed protein product [Azoarcus sp. BH72] Length = 873 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 10/185 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K Y + YP+ + H+GH I DVLARFHR+ G +VL G D G AA Sbjct: 32 RPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLARFHRMRGYNVLQPMGWDAFGMPAENAAI 91 Query: 64 NAGVT----TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 V T +D + + +D S + + T ++ + L+ ++ +KG I Sbjct: 92 QNNVPPAKWTYANIDYMKGQLKRLGFAIDWSRE--VATCTPEYYRWEQWLFTRLFEKGLI 149 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 YK + + DE +++V DG+ + + V+ E Y+ +++AY D+LL Sbjct: 150 YKKLGTVNWDPVDETVLANEQVI---DGRGWRSGAL-VEKREIPMYYMKITAYADELLEA 205 Query: 180 YESHP 184 + P Sbjct: 206 LDGLP 210 >gi|94676685|ref|YP_588685.1| leucyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123081495|sp|Q1LTM9|SYL_BAUCH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|94219835|gb|ABF13994.1| leucyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 861 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 8/177 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + + YP+ H+GH I DVL+R+HR+ G +V+ G D G +AA Sbjct: 32 KEKYYCLSMLPYPSGNLHMGHVRNYTIGDVLSRYHRMLGKNVMQPIGWDAFGLPAERAAL 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120 + N + L SYD I T ++ + + ++ +KG +Y Sbjct: 92 KNQTAPATWTYANIETMKKQLKQLGFSYDWSREITTCRPEYYRWEQWFFIQLYEKGLVYK 151 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 K + W S D+ +++V G + P+ + +F +++AY D+LL Sbjct: 152 KTSFVNWCS-NDQTVLANEQVIDGCCWRC----GAPIMLKDIPQWFLKITAYADQLL 203 >gi|289427161|ref|ZP_06428877.1| leucine--tRNA ligase [Propionibacterium acnes J165] gi|289159630|gb|EFD07818.1| leucine--tRNA ligase [Propionibacterium acnes J165] Length = 826 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE+ Y+ AYP+ H+GHA I DVLAR+ RL G DVL G D G AA Sbjct: 38 RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAV 97 Query: 64 NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +D + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y K ++ W D+ +++V G Q N QW +FR++ Y Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R S + D D + T+ D ++ V R + +I E ++ Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684 Query: 408 QLIHRALAQVISLVSEVDRYFDA 430 + +A+++ LV+ + D+ Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707 >gi|303228946|ref|ZP_07315756.1| leucine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] gi|302516360|gb|EFL58292.1| leucine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] Length = 822 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 8/174 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + +EK Y YP+ H+GH I DV+ARF +++G +VL G D G A Sbjct: 30 ESKEKYYALEMFPYPSGNLHMGHVRNYSIGDVVARFKKMNGFNVLHPMGWDSFGMPAENA 89 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119 A G+ K + N N + L +SY D + T ++ ++ + +++ KG Sbjct: 90 AIKHGIAPKTWTLDNIENMKKQQKALGLSYDWDREVATCKEDYYKWTQWFFEQFYKKGLA 149 Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 YK W N+ + DG + NPV+ + +F R++ Y Sbjct: 150 YKKEAKVNWCETCHTVLANEQVI----DGLCWRCD-NPVEKKDLSQWFLRITEY 198 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 75/317 (23%), Positives = 135/317 (42%), Gaps = 43/317 (13%) Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWIDALTNYL 239 PE LP+ R E + F + L+ S + P M +ID+ +L Sbjct: 450 PEDELPV-RLPEDVKFESGAVSPLATSEAFMNAKCPKCGGPARRETDTMDTFIDSSWYFL 508 Query: 240 TTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLP 287 T L++ D A +W D ++ G + H +Y F L+ AN P Sbjct: 509 RYTDALNDKAPFDSKIANYWMNVDQYIGGIEHAILHLLYSRFFVKVIHDLGLIEANEPF- 567 Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 + + + G +L +G K+SKS GNV+ P E+I + G D R F++ +D + G++ Sbjct: 568 RGLLTQGMVLKEGSKMSKSKGNVVSPEEIINKYGADTARLFILFAAPVDRDLDWSDQGVE 627 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENM 405 G + R V I+ YD G T+ + ++ RV++++ E++ Sbjct: 628 ---------GSYRFLGR-VWRIVDAYDQAAKENHTGDLTKDEVALRRELHRVIKKVTEDL 677 Query: 406 QNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464 N + A++ ++ LV+ + + D + + N D A+ E+ L +LL Sbjct: 678 DNNFNFNTAISAIMELVNAMYAHKD-----KAESVNADLAN-------ELTHNLVLLLAP 725 Query: 465 FVPKLANKIFDILFVAD 481 FVP + +++ L D Sbjct: 726 FVPHITEELWHELGETD 742 >gi|118477612|ref|YP_894763.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|166200197|sp|A0RDG3|SYI_BACAH RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|118416837|gb|ABK85256.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] Length = 1033 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 126/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 P K+V S G +L +G+K+SKS GN +DP++++E+ G DALR+ LV F Sbjct: 572 APY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLINVYSFYVLYANLDEYNPHETYDVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I DV+AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRTIKDVVARYKTMVGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|78223503|ref|YP_385250.1| leucyl-tRNA synthetase [Geobacter metallireducens GS-15] gi|123770264|sp|Q39T99|SYL_GEOMG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|78194758|gb|ABB32525.1| leucyl-tRNA synthetase [Geobacter metallireducens GS-15] Length = 824 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 11/195 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + K Y+ YP+ + H+GH I DV+ RF RL G +VL G D G AA Sbjct: 32 KPKYYLLEMFPYPSGRIHMGHVRNYSIGDVVGRFKRLRGFNVLHPMGWDAFGMPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120 + +N R + +SY D + T + ++ + ++ ++ +KG Y Sbjct: 92 QHKSHPAKWTYENIAYMRSQLKKMGLSYDWDRELATCDLDYYKWEQKVFLEMYEKGLAYK 151 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 K Y W + E +++V DG + Q E E +FFR++ Y ++LL Y Sbjct: 152 KTSYVNWCP-KCETVLANEQV---EDGACWRCDSEVTQ-KELEQWFFRITDYAEELLEYT 206 Query: 181 E---SHPEFILPIER 192 E PE +L ++R Sbjct: 207 EKLPGWPERVLTMQR 221 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/247 (20%), Positives = 102/247 (41%), Gaps = 44/247 (17%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK 299 D ++A++W D ++ G + H +Y F ++ + P + + G ++ Sbjct: 520 DKARAEYWMSVDQYIGGIEHAVLHLLYARFFTKALRDLGYVTVDEPF-TNLLTQGMVIKD 578 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKS GNV+DP +I G D R F + KD + G+ +G Sbjct: 579 GAKMSKSKGNVVDPDALINRYGADTARLFSLFAAPPEKDLDWSDQGV---------DGSY 629 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILS--------VCSRVLQEIRENMQNQL-I 410 +SR ++ ++P G D + LS + ++++ +++ + Sbjct: 630 RFLSRVWRLVCD----LLPFVGKGGAVDSASLSDDARGLRRAVHKTIRKVTDDIDERFHF 685 Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470 + A+A ++ LV+ + + P A V E I + I+L FVP + Sbjct: 686 NTAIAAIMELVNAIYAF------------EPKNAPENGPVLTEAIESVVIMLSPFVPHVT 733 Query: 471 NKIFDIL 477 ++++ L Sbjct: 734 EELWEAL 740 >gi|189425175|ref|YP_001952352.1| leucyl-tRNA synthetase [Geobacter lovleyi SZ] gi|189421434|gb|ACD95832.1| leucyl-tRNA synthetase [Geobacter lovleyi SZ] Length = 825 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 11/195 (5%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+K Y+ YP+ + H+GH I DV+ RF R+ G +VL G D G AA Sbjct: 34 RKKYYLLEMFPYPSGRIHMGHVRNYSIGDVVGRFKRMRGFNVLHPMGWDAFGMPAENAAI 93 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N RD + +SY D + T + ++ + L+ ++ +G YK Sbjct: 94 KNNCHPAAWTYENMAYMRDQLKQMGLSYDWDRELATCDVSYYRWEQKLFLEMYKRGIAYK 153 Query: 122 G-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 + W + N+ + DG + VQ E E +FF+++ Y ++LL + Sbjct: 154 KQSFVNWCPSCETVLANE----QVEDGGCWRCDTEVVQ-KELEQWFFKITDYAEELLDFT 208 Query: 181 E---SHPEFILPIER 192 PE +L ++R Sbjct: 209 NKLPGWPERVLVMQR 223 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 48/243 (19%), Positives = 111/243 (45%), Gaps = 37/243 (15%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK 299 D ++A++W D ++ G + H +Y F + + P + + G ++ Sbjct: 522 DKARAQYWMSVDQYIGGIEHAVLHLLYARFFTKVMRDLGYVDVDEPF-TNLLTQGMVIKD 580 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKS GNV+DP +I+ G D R F + KD +++ G+ +G Sbjct: 581 GAKMSKSKGNVVDPDALIKRYGADTARLFSLFAAPPEKDLDWNEQGV---------DGCY 631 Query: 360 NLVSRSVSMILKDYDGMIPTPG----AFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414 ++R ++ + + + P A ++ + ++ + L+++ E++ + + A+ Sbjct: 632 RFLNRVWKLVHEQLEAVAAAPALDPSALSDEERTLRRAVHKTLKKVTEDIDERFHFNTAI 691 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 A V+ L++ + + + N +A+ V+ +E++ I+L FVP + +++ Sbjct: 692 AAVMELMNTL----------QGARLNTPQAAAVMKEALELV---VIMLAPFVPHITEELW 738 Query: 475 DIL 477 +L Sbjct: 739 QLL 741 >gi|322517283|ref|ZP_08070160.1| valine--tRNA ligase [Streptococcus vestibularis ATCC 49124] gi|322124113|gb|EFX95652.1| valine--tRNA ligase [Streptococcus vestibularis ATCC 49124] Length = 901 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 7/145 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + + Sbjct: 461 VLDTWFSSALWPFSTMGWPDVEAEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 520 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D + Sbjct: 521 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDMRFSY 579 Query: 344 DGLKKRVNADLANGIGNLVSRSVSM 368 + + N N I N +SR + M Sbjct: 580 EKMDASWN--FINKIWN-ISRYILM 601 Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 58 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 112 Query: 68 TTKVFVDQNSR 78 ++ D SR Sbjct: 113 EARLAEDGISR 123 >gi|322388625|ref|ZP_08062225.1| valine--tRNA ligase [Streptococcus infantis ATCC 700779] gi|321140545|gb|EFX36050.1| valine--tRNA ligase [Streptococcus infantis ATCC 700779] Length = 883 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ + E + +V+ + Sbjct: 559 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEQATANVEKVVNK 603 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ ++ I L + I V+E Sbjct: 604 EAGNVTDRWILHNLNETIGKVTE 626 Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 88 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 89 ATQAKVEERLR 99 >gi|253576149|ref|ZP_04853481.1| isoleucyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844492|gb|EES72508.1| isoleucyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 1031 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/267 (24%), Positives = 120/267 (44%), Gaps = 28/267 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 ++ VW D+ + Y + A+ +PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQHHYPFENQETFAEQFPADMICEGIDQTRGWFYSLLAVSTLFTGKA 572 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K V + G +L G+K+SKS GNVIDP E+I E G DA R+ L+ + A + K Sbjct: 573 PY-KAVIATGHVLDENGQKMSKSKGNVIDPWEIINEFGTDAFRWALLSDSAPWNSKRFSK 631 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQ 399 G+ + + + + N + + + DG P A+ S D ILS + ++Q Sbjct: 632 -GIVAEAKSKVVDTLVN--THAFLTLYAGIDGYKPEEHAYRPSENKLDRWILSRLNSLIQ 688 Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---------NPDRASTVLYV 450 + + + A+ ++ ++ + D W ++++ N D+ S + Sbjct: 689 VVDKGL-------AVNDFVNSSQAIEGFIDELSNWYIRRSRDRFWGSGLNEDKLSAYQTL 741 Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477 T V+ ++ ++ F P +A IF L Sbjct: 742 T-HVLLTVSKVIAPFAPLIAEDIFTNL 767 Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust. Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PHIGH +I D + R+ + G V+ G D HG + + G++ K +++ Sbjct: 50 NGLPHIGHVLGRVIKDFIGRYQTMKGYRVVRKAGWDTHGLPVELGVEKELGISGKQEIEK 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T + ++ + I DKG Sbjct: 110 YGIEEFVKKCKDSVFGYEKQWREFTEAIAYWVDLDDPYITLNNSYIESVWNILATIHDKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +Y+G Y + + EV +G Sbjct: 170 LLYRGHRVSPYCPCCQTSLSSHEVAQG 196 >gi|189083248|sp|A0KN87|SYL_AERHH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS Length = 859 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 9/195 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++EK Y + YP+ + H+GH I DV++R+ RL+G +VL G D G AA Sbjct: 31 DKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLNGKNVLQPIGWDAFGLPAENAA 90 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N ++ +L + Y D + T + ++ + + K+ +KG +Y Sbjct: 91 IKNNTAPAPWTYENIEYMKNQLKMLGLGYDWDRELATCKPDYYRWEQWFFTKLYEKGLVY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178 K S + D +++V D + PV+ E +F +++ Y ++LL+ Sbjct: 151 KKTSSVNWCPNDMTVLANEQV---VDNCCWRCD-TPVEQKEIPQWFIKITDYAEELLNDI 206 Query: 179 -YYESHPEFILPIER 192 E PE + ++R Sbjct: 207 DNLEGWPEMVKTMQR 221 >gi|94263197|ref|ZP_01287014.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta proteobacterium MLMS-1] gi|93456415|gb|EAT06535.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta proteobacterium MLMS-1] Length = 829 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 9/194 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K Y+ YP+ + H+GH I DV+AR+ R+ G +V+ G D G AA Sbjct: 35 RAKYYVLEMFPYPSGRIHMGHVRNYTIGDVVARYRRMCGDNVVHPMGWDAFGMPAENAAI 94 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G + +N R L +SY D + T + ++ ++ + K+ KG Y+ Sbjct: 95 KHGTHPAKWTFENIDYMRGQLQRLGLSYDWDRELATCDPTYYRWEQLFFLKMLKKGLAYR 154 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + + +++V GA + A V + +G+F +++AY ++LL+ + Sbjct: 155 KLTTVNWCETCQTVLANEQVINGACWRCDQA----VSQRQMQGWFLKITAYAEELLAGCD 210 Query: 182 S---HPEFILPIER 192 + PE +L ++R Sbjct: 211 NLPGWPEKVLTMQR 224 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/241 (22%), Positives = 106/241 (43%), Gaps = 34/241 (14%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK 299 D A +W P D ++ G + H +Y F L+ + P + + G ++ Sbjct: 524 DKPAADYWLPVDQYIGGVEHAILHLLYSRFFTKVLRDLGYLAIDEPF-TNLLTQGMVIKD 582 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKS GNV+DP E+IE+ G D +R F + +D ++ G++ G Sbjct: 583 GAKMSKSKGNVVDPNELIEQYGADTVRLFSLFAAPPERDLEWNHQGVE---------GAF 633 Query: 360 NLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414 +SR +L + + + P A E+D ++ + ++++ ++++N + A+ Sbjct: 634 RFLSRIHRFVLDNREMLCAADEELPAAPNEADRALHRKTHQTIRKVSQDIENSFQFNTAI 693 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + V+ L + + A PD A VT ++ + LL VP L +++ Sbjct: 694 SAVMELSNTLLSLNAAG-----ANQQPDPA-----VTRRAVQTMLTLLFPMVPHLCAELW 743 Query: 475 D 475 + Sbjct: 744 E 744 >gi|325696381|gb|EGD38272.1| valine--tRNA ligase [Streptococcus sanguinis SK160] Length = 883 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/268 (25%), Positives = 116/268 (43%), Gaps = 25/268 (9%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 DP ++ W + +T G+ D +++P V G DI+ F W + ++ Sbjct: 440 DPD-VLDTWFSSALWPFSTMGWPDVNSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQ 494 Query: 283 NLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 +L + V HG I +G K+SKSLGN IDP++VI++ G DALR+FL A G Sbjct: 495 SLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPG 554 Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDE 388 +D + + + N N I N +SR + M + +++ + A +D Sbjct: 555 QDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGLTLDVAREHVAQVAAGQAGNVTDR 611 Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST 446 IL + + ++ EN A + + + + D Y + K L N D Sbjct: 612 WILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKE-VLYSDNEDEKVI 670 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIF 474 V + + Q+ LL +P + +IF Sbjct: 671 TRSVLLYTLDQILRLLHPIMPFVTEEIF 698 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107 G++ KV + D+ + ++ M +D S + F T ++ R Sbjct: 100 EQGISRYDLGREKFLNKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|254993780|ref|ZP_05275970.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J2-064] Length = 885 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D + F+P + V G DI+ F + + + + Sbjct: 450 VLDTWFSSALWPFSTMGWPDTENPDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG + +G K+SKSLGN +DPIEVI++ G D+LRY L + G+D + Sbjct: 510 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399 + ++ N N I N SR V M L DGM I SD+ IL+ + +Q Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYNEIDLSNVTEVSDKWILTRLNETIQ 622 Query: 400 EI 401 + Sbjct: 623 AV 624 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 45 SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 99 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ SR NF D Y +FIR T + D Sbjct: 100 EAKLKESNVSRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 159 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + ++ + +KG IY+G Y W A + + ++K +G +Y+ ++ Sbjct: 160 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210 >gi|290893953|ref|ZP_06556929.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] gi|290556491|gb|EFD90029.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] Length = 883 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D + F+P + V G DI+ F + + + + Sbjct: 450 VLDTWFSSALWPFSTMGWPDTENPDFKHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG + +G K+SKSLGN +DPIEVI++ G D+LRY L + G+D + Sbjct: 510 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESILSVCSRVLQ 399 + ++ N N I N SR V M L DGM + T+ SD+ IL+ + +Q Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYSEIDLTKVTEVSDKWILTRLNETIQ 622 Query: 400 EI 401 + Sbjct: 623 AV 624 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 45 SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 99 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ + SR F D Y +FIR T + D Sbjct: 100 EAKLKEENISRYDLGREKFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 159 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + ++ + +KG IY+G Y W A + + ++K +G +Y+ ++ Sbjct: 160 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210 >gi|194382482|dbj|BAG64411.1| unnamed protein product [Homo sapiens] Length = 430 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/284 (24%), Positives = 118/284 (41%), Gaps = 57/284 (20%) Query: 7 LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 + I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A Sbjct: 139 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEE 198 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125 G+T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 199 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVE 258 Query: 126 GWYSLRDE--AYYNDDEVYKGA----------------DGQYYNA-----------QHNP 156 LR E A + D +G G+ NA + P Sbjct: 259 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCEVCRSCP 315 Query: 157 VQWMEEEGYFF--------RLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKD 206 V ++ + F RL + + L S + + +FI S+++ GLK Sbjct: 316 V--VQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFI--------TRSWLRDGLKP 365 Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDN 247 ++R WG +P + + YVW DA YL+ T Y D Sbjct: 366 RCITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQ 408 >gi|94266584|ref|ZP_01290267.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta proteobacterium MLMS-1] gi|93452779|gb|EAT03314.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta proteobacterium MLMS-1] Length = 829 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 9/194 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K Y+ YP+ + H+GH I DV+AR+ R+ G +V+ G D G AA Sbjct: 35 RAKYYVLEMFPYPSGRIHMGHVRNYTIGDVVARYRRMCGDNVVHPMGWDAFGMPAENAAI 94 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G + +N R L +SY D + T + ++ ++ + K+ KG Y+ Sbjct: 95 KHGTHPAKWTFENIDYMRGQLQRLGLSYDWDRELATCDPTYYRWEQLFFLKMLKKGLAYR 154 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + + +++V GA + A V + +G+F +++AY ++LL+ + Sbjct: 155 KLTTVNWCETCQTVLANEQVINGACWRCDQA----VSQRQMQGWFLKITAYAEELLAGCD 210 Query: 182 S---HPEFILPIER 192 + PE +L ++R Sbjct: 211 NLPGWPEKVLTMQR 224 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 55/241 (22%), Positives = 106/241 (43%), Gaps = 34/241 (14%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK 299 D A +W P D ++ G + H +Y F LS + P + + G ++ Sbjct: 524 DKPAADYWLPVDQYIGGVEHAILHLLYSRFFTKVLRDLGYLSIDEPF-TNLLTQGMVIKD 582 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 G K+SKS GNV+DP E+IE+ G D +R F + +D ++ G++ G Sbjct: 583 GAKMSKSKGNVVDPNELIEQYGADTVRLFSLFAAPPERDLEWNHQGVE---------GAF 633 Query: 360 NLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414 +SR +L + + + P A E+D ++ + ++++ ++++N + A+ Sbjct: 634 RFLSRIHRFVLDNREMLCAADEELPAAPNEADRALHRKTHQTIRKVSQDIENSFQFNTAI 693 Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + V+ L + + A PD A VT ++ + LL VP L +++ Sbjct: 694 SAVMELSNTLLSLNAAG-----ANQQPDPA-----VTRRAVQTMLTLLFPMVPHLCAELW 743 Query: 475 D 475 + Sbjct: 744 E 744 >gi|217964301|ref|YP_002349979.1| valyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|217333571|gb|ACK39365.1| valyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|307571133|emb|CAR84312.1| valyl-tRNA synthetase [Listeria monocytogenes L99] Length = 884 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D + F+P + V G DI+ F + + + + Sbjct: 451 VLDTWFSSALWPFSTMGWPDTENPDFKHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 510 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG + +G K+SKSLGN +DPIEVI++ G D+LRY L + G+D + Sbjct: 511 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 569 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESILSVCSRVLQ 399 + ++ N N I N SR V M L DGM + T+ SD+ IL+ + +Q Sbjct: 570 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYSEIDLTKVTEVSDKWILTRLNETIQ 623 Query: 400 EI 401 + Sbjct: 624 AV 625 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 46 SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 100 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ + SR F D Y +FIR T + D Sbjct: 101 EAKLKEENISRYDLGREKFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 160 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + ++ + +KG IY+G Y W A + + ++K +G +Y+ ++ Sbjct: 161 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 211 >gi|193783837|dbj|BAG53819.1| unnamed protein product [Homo sapiens] Length = 546 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/277 (24%), Positives = 115/277 (41%), Gaps = 56/277 (20%) Query: 9 ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 I++A+ Y N PH+G+ ++ ADV AR+ RL + L+ GTDE+G A G+ Sbjct: 268 ITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEEGL 327 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127 T + D+ D+ +IS+D F RTT + + +++++ +G + + Sbjct: 328 TPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVE-- 385 Query: 128 YSLRDE--AYYNDDEVYKGA----------------DGQYYNA-----------QHNPVQ 158 LR E A + D +G G+ NA + PV Sbjct: 386 -QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCPV- 443 Query: 159 WMEEEGYFF--------RLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKDLS 208 ++ + F RL + + L S + + +FI S+++ GLK Sbjct: 444 -VQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFI--------TRSWLRDGLKPRC 494 Query: 209 LSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTG 243 ++R WG +P + + YVW DA YL+ T Sbjct: 495 ITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITA 530 >gi|146318113|ref|YP_001197825.1| valyl-tRNA synthetase [Streptococcus suis 05ZYH33] gi|146320294|ref|YP_001200005.1| valyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|253751303|ref|YP_003024444.1| valyl-tRNA synthetase [Streptococcus suis SC84] gi|253753204|ref|YP_003026344.1| valyl-tRNA synthetase [Streptococcus suis P1/7] gi|253755027|ref|YP_003028167.1| valyl-tRNA synthetase [Streptococcus suis BM407] gi|145688919|gb|ABP89425.1| Valyl-tRNA synthetase [Streptococcus suis 05ZYH33] gi|145691100|gb|ABP91605.1| Valyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|251815592|emb|CAZ51175.1| valyl-tRNA synthetase [Streptococcus suis SC84] gi|251817491|emb|CAZ55232.1| valyl-tRNA synthetase [Streptococcus suis BM407] gi|251819449|emb|CAR44947.1| valyl-tRNA synthetase [Streptococcus suis P1/7] gi|292557873|gb|ADE30874.1| Valyl-tRNA synthetase, class Ia [Streptococcus suis GZ1] gi|319757585|gb|ADV69527.1| valyl-tRNA synthetase [Streptococcus suis JS14] Length = 883 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 7/145 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + Sbjct: 443 VLDTWFSSALWPFSTMGWPDENAADFQRYFPTSTLVTGYDIIPFWVSRMIFQGIEFTGKS 502 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D + Sbjct: 503 PF-KNALIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561 Query: 344 DGLKKRVNADLANGIGNLVSRSVSM 368 + + N N I N +SR + M Sbjct: 562 EKMDASWN--FINKIWN-ISRYILM 583 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 23/167 (13%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVTT----------KV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 GVT KV + D+ + R+ L +S D+ R T ++ R Sbjct: 100 EQGVTRYDLGREKFLDKVWEWKDEYAATIREQWGKLGLSL-DYQRDRFTLDEGLSKAVRK 158 Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ KG IY+G + W A + + ++K +G +Y+ + Sbjct: 159 VFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|46907782|ref|YP_014171.1| valyl-tRNA synthetase [Listeria monocytogenes str. 4b F2365] gi|47093088|ref|ZP_00230865.1| valyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|226224153|ref|YP_002758260.1| valyl-tRNA synthetase [Listeria monocytogenes Clip81459] gi|254824389|ref|ZP_05229390.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|254852176|ref|ZP_05241524.1| valyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|254931492|ref|ZP_05264851.1| valyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|255521286|ref|ZP_05388523.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J1-175] gi|300764782|ref|ZP_07074772.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|81403272|sp|Q71ZB6|SYV_LISMF RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|46881051|gb|AAT04348.1| valyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|47018528|gb|EAL09284.1| valyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|225876615|emb|CAS05324.1| valyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605480|gb|EEW18088.1| valyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|293583044|gb|EFF95076.1| valyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|293593624|gb|EFG01385.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|300514458|gb|EFK41515.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|328465587|gb|EGF36816.1| valyl-tRNA synthetase [Listeria monocytogenes 1816] Length = 883 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D + F+P + V G DI+ F + + + + Sbjct: 450 VLDTWFSSALWPFSTMGWPDTENPDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG + +G K+SKSLGN +DPIEVI++ G D+LRY L + G+D + Sbjct: 510 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399 + ++ N N I N SR V M L DGM I SD+ IL+ + +Q Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYNEIDLSNVTEVSDKWILTRLNETIQ 622 Query: 400 EI 401 + Sbjct: 623 AV 624 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 45 SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 99 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ SR NF D Y +FIR T + D Sbjct: 100 EAKLKESNVSRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 159 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + ++ + +KG IY+G Y W A + + ++K +G +Y+ ++ Sbjct: 160 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210 >gi|324524450|gb|ADY48415.1| Methionyl-tRNA synthetase [Ascaris suum] Length = 157 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 4/66 (6%) Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266 +S RK +WGI +P D +YVW+DAL NYLT +G+ S ++WP VIGKD Sbjct: 50 ISRDRKRLEWGIAVPHDHTQTIYVWMDALMNYLTVSGF----PNSHYEYWPPTWQVIGKD 105 Query: 267 ILRFHA 272 IL A Sbjct: 106 ILNLLA 111 >gi|322372403|ref|ZP_08046939.1| valine--tRNA ligase [Streptococcus sp. C150] gi|321277445|gb|EFX54514.1| valine--tRNA ligase [Streptococcus sp. C150] Length = 883 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 4/115 (3%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + + Sbjct: 443 VLDTWFSSALWPFSTMGWPDVEAEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 P K V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 503 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556 Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEARLA 99 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 +G++ + F+D+ + + M +D S + F T ++ R Sbjct: 100 ESGISRYDLGREKFLDKVWEWKDEYASTIKQQWGKMGISVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ ++ KG IY+G + + + +D EV +K +G +Y+ + Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNY 205 >gi|293391011|ref|ZP_06635345.1| leucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951545|gb|EFE01664.1| leucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 862 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 6/185 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + + YP+ + H+GH I DV++R+ R+ G +VL G D G AA Sbjct: 32 KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N ++ +L SY D + T ++ + + ++ KG +YK Sbjct: 92 KNNTAPAKWTYENIAYMKNQLQLLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181 + + D+ +++V++G + PV+ E +F +++ Y ++LL+ + Sbjct: 152 KTSTVNWCPNDKTVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLNCLD 207 Query: 182 SHPEF 186 P++ Sbjct: 208 ELPQW 212 >gi|289448092|ref|ZP_06437836.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis CPHL_A] gi|289421050|gb|EFD18251.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis CPHL_A] Length = 876 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 34/263 (12%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280 DP ++ W + +T G+ D KF+P + V G DIL +W A ++ Sbjct: 439 DPD-VLDTWFSSALWPFSTLGWPDK-TAELEKFYPTSVLVTGYDIL----FFWVARMMMF 492 Query: 281 ------SANLPLPKK---------VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 A + L + VF HG I G K+SKS GNVIDP++ +E G DA Sbjct: 493 GTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADA 552 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LR+ L R + G D +D ++ N G + +++ +P+P T Sbjct: 553 LRFTLARGASPGGDLAVSEDAVRASRNF----GTKLFNATRYALLNGAAPAPLPSPNELT 608 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 ++D IL V E+ RA + D + D W L+ A Sbjct: 609 DADRWILGRLEDVRAEVDSAFDGYEFSRACESLYHFA--WDEFCD----WYLELAKTQLA 662 Query: 445 STVLYVTVEVIRQLAILLQAFVP 467 + + T + L LL+ P Sbjct: 663 QGLTHTTAVLAAGLDTLLRLLHP 685 Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 26/124 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA---KAAQNAGVTT 69 H+GHA E + D L R R+ G +VL+ GTD G Q++A K ++ G Sbjct: 50 HMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSVVEQQLAVDGKTKEDLG--R 107 Query: 70 KVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 ++FVD+ R + D +D S D F T ++ R ++K++ D G Sbjct: 108 ELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLYDAGL 165 Query: 119 IYKG 122 IY+ Sbjct: 166 IYRA 169 >gi|317407733|gb|EFV87662.1| IleS protein [Achromobacter xylosoxidans C54] Length = 953 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 15/203 (7%) Query: 230 VWIDALTNYLTTTGYLDNP-DGSKAK--FWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 VW D+ + + T G D GS WPADL++ G D R FH+ +L Sbjct: 546 VWFDSGSTHATVLGGKDGDFAGSHGAELGWPADLYLEGSDQHRGWFHSSLLTGCMLYGQP 605 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K + +HGF++ +G K+SKS+GNVI P +V + +G + LR ++ G+ D+ Sbjct: 606 PY-KALLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGELSISDE 664 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM---IPTPGAFTESDESILSVCSRVLQE 400 + KRV + I N + R + L D+D + +P G E D L++ +++ E Sbjct: 665 --ILKRV-VEGYRRIRNTL-RFLLANLADFDAVSQSVPY-GELFEIDRYALAMTAQMQAE 719 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 ++ + + H A++++ + SE Sbjct: 720 VQGHYERYDFHPAVSRLQTFCSE 742 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 67/174 (38%), Gaps = 22/174 (12%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------ 55 + R + + Y N HIGHA I+ D++ + + G D + G D HG Sbjct: 45 RGRPRFVLHDGPPYANGDIHIGHAVNKILKDIIVKSRNMAGYDAHYVPGWDCHGMPIEIQ 104 Query: 56 --QKIAKAAQNAGVTTKVF------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 +K K A V +K +D+ ++F+ + VL ++ D R Sbjct: 105 IEKKYGKHLPVAEVQSKARAYALEQIDRQRKDFKRLG-VLGEWDRPYMTMNFSNEADEIR 163 Query: 108 ILWKKISDKGDIYKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155 L I DKG +++G C+ +L + D V D + A+H Sbjct: 164 AL-GHILDKGYVFRGLKPVNWCFDCGSALAEAEVEYADRVDPAVDVAFPFAEHG 216 >gi|228478388|ref|ZP_04062996.1| valyl-tRNA synthetase [Streptococcus salivarius SK126] gi|228250067|gb|EEK09337.1| valyl-tRNA synthetase [Streptococcus salivarius SK126] Length = 883 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 4/115 (3%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + + Sbjct: 443 VLDTWFSSALWPFSTMGWPDVEAEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 P K V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 503 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556 Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94 Query: 68 TTKVFVDQNSR 78 ++ D SR Sbjct: 95 EARLAEDGISR 105 >gi|257387116|ref|YP_003176889.1| isoleucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286] gi|257169423|gb|ACV47182.1| isoleucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286] Length = 1089 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 84/323 (26%), Positives = 144/323 (44%), Gaps = 40/323 (12%) Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA- 253 E + K + DL+++ + ++PD + VW+D+ + T G +D P ++A Sbjct: 511 ETVDLHKDTVDDLTITEDGVTYE-RVPD----VFDVWLDSA---VATWGTIDYPSETEAF 562 Query: 254 -KFWPADLHVIGKDILRFHAIYWPAFLL--SANLPLP-KKVFSHGF-ILHKGEKISKSLG 308 + WPADL + D R +W + +A P ++V HG ++ G +SKS Sbjct: 563 DELWPADLIIEAHDQTR--GWFWSQLGMGTAAVGASPYERVVMHGHALMPDGRAMSKSRD 620 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG---LKKRVNA-------DLANGI 358 +DP EVI++ G D +R FL+ A G+D + DG +++R+N L Sbjct: 621 IRVDPGEVIDDYGADPMRAFLLSLAARGEDMNFSYDGTEEMQRRLNILWNVFRFPLPYMR 680 Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTE------SDESILSVCSRVLQEIRENMQNQLIHR 412 + S V+ + +G G + +DE +LS V E E M+ Sbjct: 681 MDGFSPRVATESQRSEGGDAAEGTGIDDVTLDLADEWVLSRLQTVEAEATEAMEEFRQDD 740 Query: 413 ALAQVISLVSE-VDRYFDA---QKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVP 467 A+ ++ V E V RY+ ++ WE + RA+ Y T+ V+R++ LL F P Sbjct: 741 AIEGILDFVVEDVSRYYVQLVRERMWEEDDSESKRAA---YATLYRVLREVVALLAPFTP 797 Query: 468 KLANKIFDILFVADENRCFQSLD 490 +A +I+ L E+ D Sbjct: 798 FVAEEIYGTLTGESEHPTVHMCD 820 Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 20/103 (19%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 E + Y + H+GHA+ + DV R+ R+ G DV G D HG I Sbjct: 41 EDFFFVDGPPYTSGSAHMGHAWNKSLKDVYIRYKRMCGYDVTDRPGYDMHGLPI------ 94 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 TKV + + FR+ D+ ++F+ D CR Sbjct: 95 ---ETKV---EEEKEFRNKKDIEAFGVENFV--------DACR 123 >gi|253701290|ref|YP_003022479.1| valyl-tRNA synthetase [Geobacter sp. M21] gi|251776140|gb|ACT18721.1| valyl-tRNA synthetase [Geobacter sp. M21] Length = 888 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 86/351 (24%), Positives = 149/351 (42%), Gaps = 49/351 (13%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 ++ +++ ++ L + I+P + N ++++ ++D +SR+ + WG +IP Sbjct: 362 WYVKVAPLAERALGAVKDGRTKIVPQQWENTYYDWMEN-IRDWCISRQIW-WGHRIPAWY 419 Query: 222 -----------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256 DDP ++ W + +T G+ + A F+ Sbjct: 420 CDHCGHITVAKDDPTCCDECGSDEIRQETDVLDTWFSSALWPFSTMGWPEKTP-ELASFY 478 Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNV 310 P V G DIL F W A ++ L +V +H +G+K+SKS GNV Sbjct: 479 PTSCLVTGFDILFF----WVARMMMMGLHFMDEVPFTDVYIHALVRDAQGQKMSKSKGNV 534 Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370 IDP+ VI+ G DA R+ L A G+D ++ + N AN I N SR M L Sbjct: 535 IDPLTVIDAYGTDAFRFTLAAFAAQGRDIKLAEERIAGYRN--FANKIWN-ASRFAMMNL 591 Query: 371 KDYD--GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE-VDR 426 + +D + P + +D IL ++ + + + + A + SE D Sbjct: 592 EGFDPNAVDPASLKLSNADRWILYRLNQTTVSVDAALASFRFNEAANDLYRFTWSEFCDW 651 Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y + K +L K + DR ++ YV V+ L LL F+P + +I+ L Sbjct: 652 YIELAKD-DLYKGDADRQASAKYVLWLVLENLLRLLHPFMPFITEEIWQAL 701 >gi|119504404|ref|ZP_01626484.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] gi|119459912|gb|EAW41007.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] Length = 863 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 9/193 (4%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 EK Y YP+ + H+GH IADV+AR+ R+ G +VL G D G AA Sbjct: 81 EKFYCLAMFPYPSGKLHMGHVRNYTIADVIARYQRMQGKNVLQPMGWDAFGLPAENAAIA 140 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 V + N R L +YD + T + ++ + + ++ ++G YK Sbjct: 141 NQVPPADWTLDNIAEMRSQLSRLGFAYDWSREVTTCQPDYYRWEQWFFTRLLERGLAYKK 200 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182 + D+ +++V DG+ + NPV+ +F R++AY +LL +S Sbjct: 201 EAEVNWCENDQTVLANEQV---VDGKCWRCD-NPVERKAISQWFIRITAYAQELLDDLDS 256 Query: 183 ---HPEFILPIER 192 PE ++ ++R Sbjct: 257 LTEWPEQVVAMQR 269 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 FH + L++++ P +++ + G +L G K+SKS GN +DP E+I+ G D +R F Sbjct: 592 FHKLLRDEGLVNSDEPF-RRLLTQGMVLKDGTKMSKSRGNTVDPQELIDRYGADTVRLF 649 >gi|289523084|ref|ZP_06439938.1| valine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503627|gb|EFD24791.1| valine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 895 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 17/230 (7%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFIL-HKGEKISKSLG 308 F+P L V G DI+ F W A ++ L +P K V+ H + KG+K+SKS G Sbjct: 479 FYPTSLLVTGFDIIFF----WVARMIMMGLKFMDDVPFKDVYIHALVRDEKGQKMSKSKG 534 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 NVIDP+++I + G D+LR+ L G+D F ++ N I N +R M Sbjct: 535 NVIDPVDIINQYGADSLRFTLSSLTVQGRDIFLSTQKIES--CRHFMNKIWN-AARFALM 591 Query: 369 ILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEV 424 L D+D + + D I+ ++V +E+ + ++ A + V Sbjct: 592 NLGDFDESRTMEFDDSLRLHDRWIVMRVNQVTKEVTDLIEGYFFGEASKMLYDFVWGELC 651 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 D Y + KP R V V +++ +LL F+P + +++ Sbjct: 652 DWYIEMSKPALRGDEGSKRKIASQKVLYYVFKKVLLLLHPFIPFITEELW 701 >gi|42521981|ref|NP_967361.1| leucyl-rRNA synthetase [Bdellovibrio bacteriovorus HD100] gi|60390711|sp|Q6MQU3|SYL_BDEBA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|39574511|emb|CAE78015.1| leucyl-rRNA synthetase [Bdellovibrio bacteriovorus HD100] Length = 796 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 43/232 (18%) Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSHGFILHK-GEKI 303 K+W P DL+V G + H +Y W L L P +K+ G IL GEK+ Sbjct: 512 KYWMPVDLYVGGPEHTVGHLLYARFWTKVLFDCGLVTHDEPF-QKLAHQGMILGPDGEKM 570 Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 SKS GNVI P ++ G DALR F+ KD + G+ +G+ + Sbjct: 571 SKSRGNVISPEDIARSHGADALRTFISFMGPVDKDKPWAPTGI---------DGVKRFLD 621 Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423 R +++ D ++ T A T E ++ + ++++ E++++ + A++ ++ LV+E Sbjct: 622 RITRLVVNDDGQLVATSEALTPEIEKLV---HKTIKKVTEDIESMSFNTAISAMMILVNE 678 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + R +VL ++ L +L F P LA ++++ Sbjct: 679 LYRA---------------ECRSVL-----AVKPLVQILAPFAPHLAEELWE 710 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 9/179 (5%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + K Y YP+A H+GH D+++R+ R++G +VL G D G + A Sbjct: 30 KPKYYALDMFPYPSASGLHVGHMASYTPGDIISRYKRVNGFNVLHPMGYDAFGLPAEQYA 89 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 GV + + +FR S+D I T E ++ + ++ K+ ++G Y Sbjct: 90 IQTGVHPAITTKKAIDSFRKTLQTFGFSFDWSREISTCEPDYYKWTQFIFLKLYERGLAY 149 Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 K W ND+ V DG+ H PV + + + +++ Y ++LL+ Sbjct: 150 QKEVPVNWCPALKTVLANDEVV----DGKSERGGH-PVIRVPMKQWMLKITDYAERLLN 203 >gi|289167262|ref|YP_003445529.1| valyl-tRNA synthetase [Streptococcus mitis B6] gi|288906827|emb|CBJ21661.1| valyl-tRNA synthetase [Streptococcus mitis B6] Length = 883 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSADFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368 + + + N N I N +SR + M Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILM 583 Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+D+ + M +D S + F T ++ R Sbjct: 100 GEGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|51245648|ref|YP_065532.1| valyl-tRNA synthetase [Desulfotalea psychrophila LSv54] gi|81826816|sp|Q6AMA0|SYV_DESPS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|50876685|emb|CAG36525.1| probable valyl-tRNA synthetase [Desulfotalea psychrophila LSv54] Length = 887 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 91/395 (23%), Positives = 160/395 (40%), Gaps = 66/395 (16%) Query: 130 LRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184 LR++ Y + E Y A G Y + +QW F + K + Sbjct: 329 LREQGYLVEIEDYDHAVGHCYRCKTVIEPTTSLQW------FVSVKPLAAKAVDAVRDGQ 382 Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY---- 226 I P N S++ + ++D +SR+ + WG +IP +DP Sbjct: 383 INIYPKTWYNTFYSWMDN-IRDWCISRQIW-WGHRIPAWSCADCGELIVETEDPTSCPKC 440 Query: 227 ----------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276 ++ W + +T G+ +N + F+P + + DIL F W Sbjct: 441 GSSKLSQETDVLDTWFSSALWPFSTMGWPENTKELQT-FYPTSVLITSFDILFF----WV 495 Query: 277 AFLLSANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 A ++ L L K V+ H + K G+K+SKS GNVIDP+E++ + G D++R+ L Sbjct: 496 ARMMMMGLHLMDEVPFKDVYLHALVRDKHGKKMSKSTGNVIDPLEIMAQYGTDSMRFTLT 555 Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTES 386 A G++ D+D ++ + N I N +R M + D D I TP Sbjct: 556 AFAAQGREIKLDEDRIEGYRH--FINKIWN-AARFAQMHIGDCDDSIRVAVETPKDLALG 612 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPD 442 ILS +++++ I +++ L + + + + D Y + K + D Sbjct: 613 HRWILSRTAKLVEGIHRSLRGYLFNEVASLNYQFIWKEFCDWYLEWIKSDLFSDDLVARD 672 Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +A L V +E I + L P + +I+ +L Sbjct: 673 QARGCLMVVLETILK---TLHPITPFVTEEIWSVL 704 Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 25/168 (14%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAK---A 61 S I PN H+GHA + D+L R+HR+ G + ++ GTD G Q + + A Sbjct: 42 SIVIPPPNVTGVLHVGHALNNTLQDILVRYHRMCGDNTMWIPGTDHAGIATQNVVERQLA 101 Query: 62 AQNAG---VTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCR 107 + G + + F+++ + + + D + F T ++ + R Sbjct: 102 TEGKGRHDLGREAFIERVWKWREDKGGTIVNQLKKIGSSCDWERERF--TMDEGLSTSVR 159 Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154 ++ ++ +G IYKG Y + R + DDEV ++ + G+ Y+ ++ Sbjct: 160 EVFVRLYKEGLIYKGDYIVNWCPRCQTALADDEVEHEDSKGKLYHIRY 207 >gi|312864262|ref|ZP_07724496.1| valine--tRNA ligase [Streptococcus vestibularis F0396] gi|311100263|gb|EFQ58472.1| valine--tRNA ligase [Streptococcus vestibularis F0396] Length = 883 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 7/145 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + + Sbjct: 443 VLDTWFSSALWPFSTMGWPDVEAEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D + Sbjct: 503 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561 Query: 344 DGLKKRVNADLANGIGNLVSRSVSM 368 + + N N I N +SR + M Sbjct: 562 EKMDASWN--FINKIWN-ISRYILM 583 Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94 Query: 68 TTKVFVDQNSR 78 ++ D SR Sbjct: 95 EARLAEDGISR 105 >gi|325977658|ref|YP_004287374.1| valyl-tRNA synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177586|emb|CBZ47630.1| valyl-tRNA synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 883 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDTEAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556 Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94 Query: 68 TTKVFVDQNSR 78 ++ D SR Sbjct: 95 EARLAEDGISR 105 >gi|315101253|gb|EFT73229.1| leucyl-tRNA synthetase [Propionibacterium acnes HL046PA1] Length = 826 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE+ Y+ AYP+ H+GHA I DVLAR+ RL G DVL G D G AA Sbjct: 38 RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +D + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y K ++ W D+ +++V G Q N QW +FR++ Y Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228 Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R S + D D + T+ D ++ V R + +I E ++ Sbjct: 631 ADVSPVSTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684 Query: 408 QLIHRALAQVISLVSEVDRYFDA 430 + +A+++ LV+ + D+ Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707 >gi|269115081|ref|YP_003302844.1| Leucyl-tRNA synthetase [Mycoplasma hominis] gi|268322706|emb|CAX37441.1| Leucyl-tRNA synthetase [Mycoplasma hominis ATCC 23114] Length = 805 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 72/276 (26%), Positives = 120/276 (43%), Gaps = 57/276 (20%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGS---------KAKF--W-PADLHVIGKDILRFHAIY 274 +M W + YL L NPDGS K +F W P DL++ G++ H +Y Sbjct: 486 VMPQWAGSSWYYLAYI--LKNPDGSYTPLNSSEAKKRFEEWMPVDLYIGGQEHAVLHLLY 543 Query: 275 ---WPAFLLSANLPLPKKVFS----HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALR 326 W FL + K+ F+ G I+ G+K+SKSLGNVI+P + I G D+LR Sbjct: 544 ARFWHRFLFDLGIVNTKEPFTKLINQGLIMGPDGQKMSKSLGNVINPDDFILSHGADSLR 603 Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386 + + F K + D NGI R + I ++ + S Sbjct: 604 VY---------EMFMGPLVESKSWSTDSLNGI----RRWIEKIYNIFEYFVKGNIDINNS 650 Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 + ++S ++++ E+ EN++ + A+++++ + + KT P Sbjct: 651 NNELISNINKLILEVSENIEKTKFNIAISKMMVFTNYLTSL----------KTIPSSF-- 698 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482 V++Q AILL F P LA ++LF+ +E Sbjct: 699 -------VLKQFAILLSPFAPFLAE---ELLFMLNE 724 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 19/202 (9%) Query: 4 REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +K YI YP+ H+GH D++AR+ RL+G DVL G D G + A Sbjct: 28 NKKAYILDMFPYPSGMGLHVGHLEGYTATDIIARYKRLNGFDVLHPIGWDAFGLPAEQYA 87 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKG--- 117 G + F +N NFR + S YD + TT+ + + + ++K++ +G Sbjct: 88 IKTGNDPEPFTLKNIANFRRQLQAMGFSYDYDKEVNTTDPKFYIWTQWIFKEMYKQGLAS 147 Query: 118 ----DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173 D+ C L +E + + G + + QW+ +++AY Sbjct: 148 IEEIDV-NWCEGLGTVLANEEILEKNGIKVSERGNFPVVKKPMKQWV------LKITAYA 200 Query: 174 DKLLSYYE--SHPEFILPIERR 193 DKLL E PE + ++R Sbjct: 201 DKLLEGLEDLDWPESLKQLQRN 222 >gi|307103633|gb|EFN51891.1| hypothetical protein CHLNCDRAFT_56341 [Chlorella variabilis] Length = 905 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 93/225 (41%), Gaps = 56/225 (24%) Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221 E +F R+ L S ILP +R +V +F +KD +SR+ + WG +IP Sbjct: 349 EQWFVRMEPLAKPALEAVASGAIRILP-DRFEKVYNFWLDNIKDWCISRQLW-WGHRIPV 406 Query: 222 ----DDP---------------------------QY-----------IMYVWIDALTNYL 239 DD QY ++ W + Sbjct: 407 WYVFDDEAAAAAAASSERYVVAKSEGEARDRAVQQYGPDVVLKQESDVLDTWFSSGLWPF 466 Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-----PLPKKVFSHG 294 +T G+ N +++P + G DIL +W A ++ L P V+ HG Sbjct: 467 STLGW-PNATPDLERYYPTAVMETGHDIL----FFWVARMIMMGLECTGRPPFHTVYLHG 521 Query: 295 FIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 + KG K+SKSLGNV+DP+E I++ G DALR+ L + G+D Sbjct: 522 LVRDEKGRKMSKSLGNVVDPVETIQQYGADALRFTLATGTSPGQD 566 >gi|72026470|ref|XP_798583.1| PREDICTED: similar to MGC69150 protein, partial [Strongylocentrotus purpuratus] gi|115925072|ref|XP_001197290.1| PREDICTED: similar to MGC69150 protein, partial [Strongylocentrotus purpuratus] Length = 549 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 1/116 (0%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + + I++A+ Y N PH+G +++ DV +RF RL + L+ GTDE+G A Sbjct: 112 KNILITSALPYVNNVPHLGTIIGCVLSGDVFSRFCRLRNYNTLYICGTDEYGTATETKAL 171 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 G+T + D+ RD+ +I +D F RTT ++ + + ++ ++ G I Sbjct: 172 EEGLTPQQICDKYHALHRDIYKWFNIDFDHFGRTTTQKQTEIAQDIFHRLHAAGHI 227 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 17/214 (7%) Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAK 254 S+V+ GLK ++R WG +P + YVW DA Y + T Y D + K Sbjct: 332 SWVRDGLKPRCITRD-LKWGTPVPLKGYTDKVFYVWYDAPIGYPSITANYTDQWE----K 386 Query: 255 FWPADLHV-----IGKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSL 307 +W V + KD + FH++ +P+ L+ AN + + + ++ ++ K SKS Sbjct: 387 WWKNPQQVQLYNFMAKDNVPFHSVIFPSCLIGANDNYTMVNHLIATEYLNYEDTKFSKSR 446 Query: 308 G-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366 G V + D R++L+ +D + + N++L N +GN ++RSV Sbjct: 447 GIGVFGDNAQSTGIPADIWRFYLLYIRPETQDSAFSWADFVWKNNSELLNNLGNFINRSV 506 Query: 367 SM-ILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399 + L++ G + DE +++ +R L+ Sbjct: 507 GLTFLENSFGSVIPEIRLESEDERLIAEINRELK 540 >gi|330469644|ref|YP_004407387.1| valyl-tRNA synthetase [Verrucosispora maris AB-18-032] gi|328812615|gb|AEB46787.1| valyl-tRNA synthetase [Verrucosispora maris AB-18-032] Length = 872 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/234 (28%), Positives = 101/234 (43%), Gaps = 18/234 (7%) Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSA-NLPLPKKVFS-HGFILHK-GEKISKSLGN 309 AKF+P + V G DIL F F L A + P V + HG + + G+K+SKS GN Sbjct: 475 AKFYPTSVLVTGYDILFFWVARMMMFGLYAMDGKQPFDVIALHGMVRDEHGKKMSKSFGN 534 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 V+DP++ I+ G DA R+ L R G D +D + N N + N +R + Sbjct: 535 VVDPLDWIDRYGADATRFTLARGANPGGDVPVSEDWCQGSRN--FCNKLWN-ATRFALLN 591 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE------ 423 G +P + D ILS ++V E+ E + A+V L+ Sbjct: 592 GAHTAGALPGAAELSTVDRWILSRLAQVTAEVDEQFEAY----EFAKVCDLLYHFAWDDV 647 Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D Y + KP + A T V V+ QL LL +P + +++ L Sbjct: 648 CDWYVELSKP--VLAAGGAAADTSRRVLGHVLDQLLRLLHPVIPFVTEELWTAL 699 >gi|314978351|gb|EFT22445.1| leucyl-tRNA synthetase [Propionibacterium acnes HL072PA2] gi|315088782|gb|EFT60758.1| leucyl-tRNA synthetase [Propionibacterium acnes HL072PA1] Length = 826 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE+ Y+ AYP+ H+GHA I DVLAR+ RL G DVL G D G AA Sbjct: 38 RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +D + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y K ++ W D+ +++V G Q N QW +FR++ Y Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R S + D D + T+ D ++ V R + +I E ++ Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684 Query: 408 QLIHRALAQVISLVSEVDRYFDA 430 + +A+++ LV+ + D+ Sbjct: 685 GRYNVVVARIMELVNATRKVIDS 707 >gi|313838589|gb|EFS76303.1| leucyl-tRNA synthetase [Propionibacterium acnes HL086PA1] Length = 826 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE+ Y+ AYP+ H+GHA I DVLAR+ RL G DVL G D G AA Sbjct: 38 RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +D + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y K ++ W D+ +++V G Q N QW +FR++ Y Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 24/190 (12%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R S + D D + T+ D ++ V R + +I E ++ Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 + +A+++ LV+ + D+ +P V + TV+ + +A P Sbjct: 685 GRYNVVVARIMELVNATRKAIDSG----CGPADPAVREAVTF-TVQALSLVA-------P 732 Query: 468 KLANKIFDIL 477 LA +++++L Sbjct: 733 YLAEEMWEML 742 >gi|313764602|gb|EFS35966.1| leucyl-tRNA synthetase [Propionibacterium acnes HL013PA1] gi|314915596|gb|EFS79427.1| leucyl-tRNA synthetase [Propionibacterium acnes HL005PA4] gi|314918448|gb|EFS82279.1| leucyl-tRNA synthetase [Propionibacterium acnes HL050PA1] gi|314919937|gb|EFS83768.1| leucyl-tRNA synthetase [Propionibacterium acnes HL050PA3] gi|314931951|gb|EFS95782.1| leucyl-tRNA synthetase [Propionibacterium acnes HL067PA1] gi|314955818|gb|EFT00218.1| leucyl-tRNA synthetase [Propionibacterium acnes HL027PA1] gi|327450925|gb|EGE97579.1| leucyl-tRNA synthetase [Propionibacterium acnes HL087PA3] gi|327453725|gb|EGF00380.1| leucyl-tRNA synthetase [Propionibacterium acnes HL083PA2] gi|328754347|gb|EGF67963.1| leucyl-tRNA synthetase [Propionibacterium acnes HL087PA1] gi|328754923|gb|EGF68539.1| leucyl-tRNA synthetase [Propionibacterium acnes HL025PA2] Length = 826 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE+ Y+ AYP+ H+GHA I DVLAR+ RL G DVL G D G AA Sbjct: 38 RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +D + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y K ++ W D+ +++V G Q N QW +FR++ Y Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228 Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R S + D D + T+ D ++ V R + +I E ++ Sbjct: 631 ADVSPVSTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684 Query: 408 QLIHRALAQVISLVSEVDRYFDA 430 + +A+++ LV+ + D+ Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707 >gi|307710391|ref|ZP_07646831.1| valyl-tRNA synthetase [Streptococcus mitis SK564] gi|307618868|gb|EFN98004.1| valyl-tRNA synthetase [Streptococcus mitis SK564] Length = 883 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGFAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368 + + + N N I N +SR + M Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILM 583 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G+T + F+D+ + M +D S + F T ++ R Sbjct: 100 GEGITRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|306832917|ref|ZP_07466049.1| valine--tRNA ligase [Streptococcus bovis ATCC 700338] gi|304424816|gb|EFM27950.1| valine--tRNA ligase [Streptococcus bovis ATCC 700338] Length = 883 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDTEAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556 Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94 Query: 68 TTKVFVDQNSR 78 ++ D SR Sbjct: 95 EARLAEDGISR 105 >gi|288904741|ref|YP_003429962.1| valyl-tRNA synthetase [Streptococcus gallolyticus UCN34] gi|288731466|emb|CBI13020.1| valyl-tRNA synthetase [Streptococcus gallolyticus UCN34] Length = 883 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDTEAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556 Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94 Query: 68 TTKVFVDQNSR 78 ++ D SR Sbjct: 95 EARLAEDGISR 105 >gi|116252545|ref|YP_768383.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] gi|123384698|sp|Q1MFI6|SYL1_RHIL3 RecName: Full=Leucyl-tRNA synthetase 1; AltName: Full=Leucine--tRNA ligase 1; Short=LeuRS 1 gi|115257193|emb|CAK08288.1| putative leucyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] Length = 838 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 9/178 (5%) Query: 4 REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R K Y YP+ A H+GH D++ R+ R+ G +VL G D G + A Sbjct: 30 RPKFYALDMFPYPSGAGLHVGHPLGYTATDIMCRYKRMRGFNVLHPMGWDSFGLPAERHA 89 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119 GV + +N FR L SYD +F TT+ + + ++ K+ + G Sbjct: 90 MRTGVHPDITTKRNIETFRGQVQRLGFSYDWSREFA-TTDPAYVRWTQWIFLKLFENGLA 148 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y+ + + A D+EV DG+Y +PV + R++AY D+LL Sbjct: 149 YQAEVAVNWCPAQNAVLADEEV---KDGRYVETG-DPVIRRRMRQWMLRITAYADRLL 202 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 38/177 (21%), Positives = 80/177 (45%), Gaps = 30/177 (16%) Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 EK+SKS NV++P +V+ + G DALR + E+ G D K A + G+ Sbjct: 607 EKMSKSQLNVVNPDDVVHQFGADALRLY---EMFMGP-----LDAAKPWQTAGVI-GVRR 657 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420 + R+ ++ + DG+ P S + +L + + ++ + +++ + A+++++ L Sbjct: 658 FLERAWRIVCDESDGLSPVVLEAAPSPQ-LLRLRHQTVKTVTADIEAIRFNTAVSRLMEL 716 Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + + +A +P EV+ +LL F P +A +++ L Sbjct: 717 ANALTA--EAARP------------------REVVETFVLLLAPFAPHIAEELWSKL 753 >gi|313820181|gb|EFS57895.1| leucyl-tRNA synthetase [Propionibacterium acnes HL036PA1] gi|313823011|gb|EFS60725.1| leucyl-tRNA synthetase [Propionibacterium acnes HL036PA2] gi|314925410|gb|EFS89241.1| leucyl-tRNA synthetase [Propionibacterium acnes HL036PA3] Length = 826 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE+ Y+ AYP+ H+GHA I DVLAR+ RL G DVL G D G AA Sbjct: 38 RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +D + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y K ++ W D+ +++V G Q N QW +FR++ Y Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R S + D D + T+ D ++ V R + +I E ++ Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684 Query: 408 QLIHRALAQVISLVSEVDRYFDA 430 + +A+++ LV+ + D+ Sbjct: 685 GRYNVVVARIMELVNATRKTIDS 707 >gi|303245563|ref|ZP_07331846.1| leucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] gi|302492826|gb|EFL52691.1| leucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] Length = 837 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 26/203 (12%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K Y+ YP+ + H+GH I DV+ARF R++G +VL G D G AA Sbjct: 31 RPKYYVLEMFPYPSGRIHMGHVRNYCIGDVVARFKRMEGNNVLHPMGWDAFGMPAENAAI 90 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC--------RILWKKISD 115 + + N + R L SYD +R TC + + K+ + Sbjct: 91 KHKLHPAAWTLSNIESMRTQIKRLGYSYD------WRRELATCHPDYYVHEQRFFLKLLE 144 Query: 116 KGDIYKGCYS--GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173 KG +Y+ YS W N+ + DG + PV + E +F R++AY Sbjct: 145 KGLVYRK-YSPQNWCETCGTVLANEQVI----DGCCWRCDQ-PVVQKDLEQWFLRITAYA 198 Query: 174 DKLL----SYYESHPEFILPIER 192 ++LL PE +L ++R Sbjct: 199 EELLDDLAQLVGGWPERVLTMQR 221 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 71/319 (22%), Positives = 124/319 (38%), Gaps = 49/319 (15%) Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243 PE LP+E + +S + G L +S+ D + P D L + ++ Sbjct: 453 PEKDLPVELPRD-LSLLPDGRSPLPVSKSFTDVACPVCGGPARRE---TDTLDTFFESSW 508 Query: 244 YL---------DNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANL 284 Y D P D K+W P D ++ G + H +Y F+ L+ + Sbjct: 509 YFIRFASARDRDRPFDPEATKYWLPVDQYIGGIEHAILHLLYSRFFVKALRDLGYLTFDE 568 Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 P + + G ++ G K+SKS GNV+DP ++I + G D +R F++ KD + Sbjct: 569 PF-ANLLTQGMVIKDGSKMSKSKGNVVDPDDMIAKYGADTVRVFILFAAPPEKDLDWSDT 627 Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--------PGAFTESDESILSVCSR 396 G++ + + + LV+ ++ +L P P F E + ++ Sbjct: 628 GIEG--ASRFLSRLWRLVTEELAAVLSPVAACAPAGELGQGGLPELFAELRRREHATAAK 685 Query: 397 VLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 +IRE Q N I A+ V L + V E K+ P A V + Sbjct: 686 AGADIRERFQFNTAIAAAMELVNFLYANV----------ETLKSEPKGAKAV----SSAV 731 Query: 456 RQLAILLQAFVPKLANKIF 474 L +L P + +++ Sbjct: 732 ATLLTVLSPIAPHICEELW 750 >gi|302343431|ref|YP_003807960.1| valyl-tRNA synthetase [Desulfarculus baarsii DSM 2075] gi|301640044|gb|ADK85366.1| valyl-tRNA synthetase [Desulfarculus baarsii DSM 2075] Length = 881 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 89/390 (22%), Positives = 151/390 (38%), Gaps = 61/390 (15%) Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185 G RDE +N Y+ H V+ + + +F ++ ++ L + Sbjct: 332 GLLERRDEHMHNVGHCYRC---------HTMVEPILSKQWFVKVGPLAEEALKAVQDGRT 382 Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------DDPQY------ 226 I+P E + +G++D +SR+ + WG +IP DP Sbjct: 383 RIVP-EVWTKTYYDWMTGIRDWCISRQIW-WGHRIPAWYCQCGQVIVSRQDPTVCPACGA 440 Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278 ++ W + +T G+ D K KF+P V DIL +W A Sbjct: 441 DQLRRESDVLDTWFSSALWPFSTMGWPDQTAELK-KFYPTSCLVTAFDIL----FFWVAR 495 Query: 279 LLSANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332 ++ L K V+ H + + G+K+SKS GNVIDP+ V+++ G DA+R+ L Sbjct: 496 MMMMGLKFMGEAPFKDVYIHALVRDEHGQKMSKSKGNVIDPLVVMDQFGTDAVRFTLAAF 555 Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY---DGMIPTPGAFTESDES 389 A G+D ++ + N N I N ++ + D+ +G+ P D Sbjct: 556 AAQGRDVKLSEERIAGYRN--FVNKIWNAARFTLMHLEGDHQRPEGLEP-----LLEDRW 608 Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447 ILS RV E + + A V D Y + K +P R + Sbjct: 609 ILSRVGRVADEAALAIDEYRFNDAAGAVYQFAWHEFCDWYLELIKGPLYNDADPARQAAT 668 Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +V +L LL F+P + +++ L Sbjct: 669 RATLRQVFSRLIRLLHPFMPFVTEELWQRL 698 Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 S I PN Q HIGHA + D+L RF R++G +VL+ GTD G Sbjct: 41 SIVIPPPNVTGQLHIGHALNNTLQDILCRFKRMNGWEVLWMPGTDHAG 88 >gi|171778747|ref|ZP_02919843.1| hypothetical protein STRINF_00695 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282704|gb|EDT48128.1| hypothetical protein STRINF_00695 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 883 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDTEAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556 Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94 Query: 68 TTKVFVDQNSR 78 ++ D SR Sbjct: 95 EARLAEDGISR 105 >gi|145298097|ref|YP_001140938.1| leucyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] gi|166230606|sp|A4SJW8|SYL_AERS4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|142850869|gb|ABO89190.1| leucyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] Length = 858 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 9/195 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++EK Y + YP+ + H+GH I DV++R+ RL+G +VL G D G AA Sbjct: 31 DKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLNGKNVLQPIGWDAFGLPAENAA 90 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120 + +N ++ +L + Y D + T + ++ + + K+ +KG +Y Sbjct: 91 VKNNTAPAPWTYENIEYMKNQLKMLGLGYDWDRELATCKPDYYRWEQWFFTKLYEKGLVY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178 K S + D +++V D + PV+ E +F +++ Y ++LL+ Sbjct: 151 KKTSSVNWCPNDMTVLANEQV---VDNCCWRCD-TPVEQKEIPQWFIKITDYAEELLNDI 206 Query: 179 -YYESHPEFILPIER 192 E PE + ++R Sbjct: 207 DNLEGWPEMVKTMQR 221 >gi|332178820|gb|AEE14509.1| leucyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796] Length = 826 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 8/178 (4%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K +K+YI YP+ H+GH I DV+AR++R+ +VL G D G A Sbjct: 29 KGNKKMYILEMFPYPSGNLHMGHVRNYTIGDVVARYYRMKSYNVLHPMGWDAFGMPAENA 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119 A GV + +N N + + L ISY D + T ++ + L+ + KG + Sbjct: 89 AIKYGVHPYEWTIKNIENMKRQLNSLGISYDWDREVATCFPDYYKWNQWLFLQFYKKGLV 148 Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176 Y K W N+ + +G+ + + + V+ E E +FFR++ Y ++L Sbjct: 149 YKKKSKVNWCPQCKTVLANE----QAEEGRCWRCK-SEVELKELEQWFFRITNYAEEL 201 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 34/249 (13%) Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEK 302 KAKFW D ++ G + H +Y F+ L+ + P + + G +L GEK Sbjct: 526 KAKFWMSVDQYIGGVEHAVLHLLYSRFFVKVLRDLGFLNIDEPF-SNLLTQGMVLKDGEK 584 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362 +SKS GN++DP E+I G D R F++ KD + G++ + LA I L Sbjct: 585 MSKSKGNIVDPEEIISTYGADTARLFILFAAPPEKDLEWSDQGVEG-AHRFLAR-IWKLF 642 Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLV 421 + ++ I K+ + + TE + +I ++ L + +++N+ + ++A ++ Sbjct: 643 NENLERI-KNVEASVEED--LTEDEVNIYKKLNKTLLKASNDIENKFHFNTSIAALMEFT 699 Query: 422 SEVDRYFDAQK--PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479 +E +K P +KK + I+L F P ++ +I+ + Sbjct: 700 NEFSYSLRNEKIRPKLIKK---------------IFETFTIILSVFAPHISEEIWSRMGH 744 Query: 480 ADENRCFQS 488 D CFQ+ Sbjct: 745 TDL-VCFQN 752 >gi|314958300|gb|EFT02403.1| leucyl-tRNA synthetase [Propionibacterium acnes HL002PA1] Length = 826 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE+ Y+ AYP+ H+GHA I DVLAR+ RL G DVL G D G AA Sbjct: 38 RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +D + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y K ++ W D+ +++V G Q N QW +FR++ Y Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228 Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R S + D D + T+ D ++ V R + +I E ++ Sbjct: 631 ADVSPVSTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684 Query: 408 QLIHRALAQVISLVSEVDRYFDA 430 + +A+++ LV+ + D+ Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707 >gi|313801759|gb|EFS42993.1| leucyl-tRNA synthetase [Propionibacterium acnes HL110PA2] gi|313816139|gb|EFS53853.1| leucyl-tRNA synthetase [Propionibacterium acnes HL059PA1] gi|313827958|gb|EFS65672.1| leucyl-tRNA synthetase [Propionibacterium acnes HL063PA2] gi|314962951|gb|EFT07051.1| leucyl-tRNA synthetase [Propionibacterium acnes HL082PA1] gi|314967975|gb|EFT12074.1| leucyl-tRNA synthetase [Propionibacterium acnes HL037PA1] gi|315098391|gb|EFT70367.1| leucyl-tRNA synthetase [Propionibacterium acnes HL059PA2] gi|315108477|gb|EFT80453.1| leucyl-tRNA synthetase [Propionibacterium acnes HL030PA2] Length = 826 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE+ Y+ AYP+ H+GHA I DVLAR+ RL G DVL G D G AA Sbjct: 38 RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +D + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y K ++ W D+ +++V G Q N QW +FR++ Y Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R S + D D + T+ D ++ V R + +I E ++ Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684 Query: 408 QLIHRALAQVISLVSEVDRYFDA 430 + +A+++ LV+ + D+ Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707 >gi|258621973|ref|ZP_05717002.1| Leucyl-tRNA synthetase [Vibrio mimicus VM573] gi|258585726|gb|EEW10446.1| Leucyl-tRNA synthetase [Vibrio mimicus VM573] Length = 894 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 29/246 (11%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++RF RL G +VL G D G AA Sbjct: 68 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 127 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115 + +N ++ +L YD R TCR + K+ + Sbjct: 128 KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFE 181 Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175 KG +YK S + D+ +++V DG + PV+ E +F +++AY + Sbjct: 182 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAYAQE 237 Query: 176 LLSYYESH---PEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228 LL ++ PE + ++R R+E + +K +KD + + + PD + Sbjct: 238 LLDDLDNLDGWPEMVKTMQRNWIGRSEGVE-LKFAVKDENTDLEVY---TTRPDTLMGVT 293 Query: 229 YVWIDA 234 YV I A Sbjct: 294 YVGIAA 299 >gi|320546286|ref|ZP_08040606.1| valine--tRNA ligase [Streptococcus equinus ATCC 9812] gi|320449063|gb|EFW89786.1| valine--tRNA ligase [Streptococcus equinus ATCC 9812] Length = 883 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDTEAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556 Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94 Query: 68 TTKVFVDQNSR 78 ++ D SR Sbjct: 95 EARLAEDGISR 105 >gi|308048542|ref|YP_003912108.1| leucyl-tRNA synthetase [Ferrimonas balearica DSM 9799] gi|307630732|gb|ADN75034.1| leucyl-tRNA synthetase [Ferrimonas balearica DSM 9799] Length = 859 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 9/194 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++RF RL G +VL G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRFQRLQGKNVLQPIGWDAFGLPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N + +L YD + T + ++ + + ++ +KG IYK Sbjct: 92 KNKSAPGPWTYENIEYMKGQLKMLGFGYDWSRELATCKPDYYRWEQWFFTELYNKGLIYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 + + D+ +++V DG + PV E +F +++ Y D+LLS Sbjct: 152 KTSAVNWCENDQTVLANEQV---VDGCCWRCD-TPVVQKEIPQWFIKITDYADQLLSDMD 207 Query: 179 YYESHPEFILPIER 192 E PE + ++R Sbjct: 208 QLEGWPEMVKTMQR 221 >gi|306830739|ref|ZP_07463903.1| valine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304427086|gb|EFM30194.1| valine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 883 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDTEAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556 Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94 Query: 68 TTKVFVDQNSR 78 ++ D SR Sbjct: 95 EARLAEDGISR 105 >gi|260187457|ref|ZP_05764931.1| valyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A] Length = 886 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 34/263 (12%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280 DP ++ W + +T G+ D KF+P + V G DIL +W A ++ Sbjct: 449 DPD-VLDTWFSSALWPFSTLGWPDK-TAELEKFYPTSVLVTGYDIL----FFWVARMMMF 502 Query: 281 ------SANLPLPKK---------VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324 A + L + VF HG I G K+SKS GNVIDP++ +E G DA Sbjct: 503 GTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADA 562 Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384 LR+ L R + G D +D ++ N G + +++ +P+P T Sbjct: 563 LRFTLARGASPGGDLAVSEDAVRASRN----FGTKLFNATRYALLNGAAPAPLPSPNELT 618 Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444 ++D IL V E+ RA + D + D W L+ A Sbjct: 619 DADRWILGRLEDVRAEVDSAFDGYEFSRACESLYHFA--WDEFCD----WYLELAKTQLA 672 Query: 445 STVLYVTVEVIRQLAILLQAFVP 467 + + T + L LL+ P Sbjct: 673 QGLTHTTAVLAAGLDTLLRLLHP 695 Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 26/124 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA---KAAQNAGVTT 69 H+GHA E + D L R R+ G +VL+ GTD G Q++A K ++ G Sbjct: 60 HMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSVVEQQLAVDGKTKEDLG--R 117 Query: 70 KVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118 ++FVD+ R + D +D S D F T ++ R ++K++ D G Sbjct: 118 ELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLYDAGL 175 Query: 119 IYKG 122 IY+ Sbjct: 176 IYRA 179 >gi|228907943|ref|ZP_04071794.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200] gi|228851702|gb|EEM96505.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200] Length = 1033 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++++ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G V+ G D HG Sbjct: 50 NGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHG 88 >gi|295130455|ref|YP_003581118.1| leucine--tRNA ligase [Propionibacterium acnes SK137] gi|291376678|gb|ADE00533.1| leucine--tRNA ligase [Propionibacterium acnes SK137] gi|313772360|gb|EFS38326.1| leucyl-tRNA synthetase [Propionibacterium acnes HL074PA1] gi|313807371|gb|EFS45858.1| leucyl-tRNA synthetase [Propionibacterium acnes HL087PA2] gi|313809880|gb|EFS47601.1| leucyl-tRNA synthetase [Propionibacterium acnes HL083PA1] gi|313825061|gb|EFS62775.1| leucyl-tRNA synthetase [Propionibacterium acnes HL063PA1] gi|313830793|gb|EFS68507.1| leucyl-tRNA synthetase [Propionibacterium acnes HL007PA1] gi|313834011|gb|EFS71725.1| leucyl-tRNA synthetase [Propionibacterium acnes HL056PA1] gi|314973218|gb|EFT17314.1| leucyl-tRNA synthetase [Propionibacterium acnes HL053PA1] gi|314975890|gb|EFT19985.1| leucyl-tRNA synthetase [Propionibacterium acnes HL045PA1] gi|314983642|gb|EFT27734.1| leucyl-tRNA synthetase [Propionibacterium acnes HL005PA1] gi|314987590|gb|EFT31681.1| leucyl-tRNA synthetase [Propionibacterium acnes HL005PA2] gi|314990075|gb|EFT34166.1| leucyl-tRNA synthetase [Propionibacterium acnes HL005PA3] gi|315084461|gb|EFT56437.1| leucyl-tRNA synthetase [Propionibacterium acnes HL027PA2] gi|315096127|gb|EFT68103.1| leucyl-tRNA synthetase [Propionibacterium acnes HL038PA1] gi|327326046|gb|EGE67836.1| leucine--tRNA ligase [Propionibacterium acnes HL096PA2] gi|327332082|gb|EGE73819.1| leucine--tRNA ligase [Propionibacterium acnes HL096PA3] gi|327443287|gb|EGE89941.1| leucyl-tRNA synthetase [Propionibacterium acnes HL013PA2] gi|327446071|gb|EGE92725.1| leucyl-tRNA synthetase [Propionibacterium acnes HL043PA2] gi|327447947|gb|EGE94601.1| leucyl-tRNA synthetase [Propionibacterium acnes HL043PA1] gi|328753613|gb|EGF67229.1| leucyl-tRNA synthetase [Propionibacterium acnes HL020PA1] gi|328760453|gb|EGF74021.1| leucine--tRNA ligase [Propionibacterium acnes HL099PA1] Length = 826 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE+ Y+ AYP+ H+GHA I DVLAR+ RL G DVL G D G AA Sbjct: 38 RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +D + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y K ++ W D+ +++V G Q N QW +FR++ Y Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R S + D D + T+ D ++ V R + +I E ++ Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684 Query: 408 QLIHRALAQVISLVSEVDRYFDA 430 + +A+++ LV+ + D+ Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707 >gi|157413338|ref|YP_001484204.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] gi|166980079|sp|A8G4T7|SYL_PROM2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|157387913|gb|ABV50618.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] Length = 856 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 5/175 (2%) Query: 5 EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64 +K Y + YP+ H+GH +I D++ARFHR G VL G D G AA Sbjct: 44 DKFYALSMFPYPSGNLHMGHVRNYVITDLIARFHRFKGKSVLHPMGWDAFGLPAENAAIE 103 Query: 65 AGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122 G++ V+ QN + R +L +S +D T ++ ++ + L+ ++ G +Y+ Sbjct: 104 RGISPSVWTKQNISHMRSQLKLLGLSVDWDREFATCDENYYIWTQYLFLELYKAGLVYQK 163 Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 + D +++V ++G+ + + V+ + +F R++ Y D+LL Sbjct: 164 ESEVNWDPVDNTVLANEQV--DSEGKSWRSGA-VVEKKLLKQWFLRITNYADELL 215 Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust. Identities = 39/178 (21%), Positives = 82/178 (46%), Gaps = 26/178 (14%) Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIG 359 EK+SKS N IDP VI++ G D R F++ + KD + D D G Sbjct: 621 EKMSKSKYNGIDPESVIKKYGADTARMFILFKAPPEKDLEWGDTD----------VEGQF 670 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 ++R + + + ++ + ++S++ + ++EI ++ N + A Sbjct: 671 RFLNRIWKLYINCAKDINSKSNSYPDREKSLIKSMNIAIKEISNDILNNQFNTA------ 724 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 +SE+ +++++ L + D +T + +E ++ ILL F P +A +I+ ++ Sbjct: 725 -ISELMKFYNS-----LANSINDVNNT---LKIEALKTFCILLAPFAPHIAEEIWHLI 773 >gi|33592821|ref|NP_880465.1| isoleucyl-tRNA synthetase [Bordetella pertussis Tohama I] gi|81425095|sp|Q7VXK3|SYI_BORPE RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|33572469|emb|CAE42039.1| isoleucyl-tRNA synthetase [Bordetella pertussis Tohama I] Length = 953 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 13/202 (6%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284 VW D+ + + T G D G WPADL++ G D R FH+ +L + Sbjct: 546 VWFDSGSTHATVLGGKDGVLGGSHGAELAWPADLYLEGSDQHRGWFHSSLLTGCMLYGHP 605 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K + +HGF++ +G K+SKS+GNVI P +V + +G + LR ++ G+ D+ Sbjct: 606 PY-KGLLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGELSISDE 664 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQEI 401 + KRV + I N + R + + D+D G G E D L++ +++ E+ Sbjct: 665 --ILKRV-VESYRRIRNTL-RFLLANVADFDAVGQAVPYGELFEIDRYALAMTAQMQAEV 720 Query: 402 RENMQNQLIHRALAQVISLVSE 423 + + + H A++++ + SE Sbjct: 721 QGHYERYDFHPAVSRLQTFCSE 742 Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 16/135 (11%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------ 55 + R + + Y N HIGHA I+ D++ + + G D + G D HG Sbjct: 45 RGRPRFVLHDGPPYANGDIHIGHAVNKILKDIIVKSRNMAGYDAHYVPGWDCHGMPIEIQ 104 Query: 56 --QKIAKAAQNAGVTTKVF------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 +K K V +K +D+ ++F+ + VL ++ ++ D R Sbjct: 105 IEKKYGKHLPVTEVQSKARAYALEQIDRQRKDFKRLG-VLGDWHNPYLTMNFSNEADEIR 163 Query: 108 ILWKKISDKGDIYKG 122 +L +I +KG +++G Sbjct: 164 VL-GRILEKGYVFRG 177 >gi|282891964|ref|ZP_06300443.1| hypothetical protein pah_c200o137 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498224|gb|EFB40564.1| hypothetical protein pah_c200o137 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 957 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 88/400 (22%), Positives = 145/400 (36%), Gaps = 101/400 (25%) Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221 +F R+S + KL ES ++P N ++ + L+D +SR+ + WG +IP Sbjct: 370 WFVRMSEFGKKLRHIIESKQVTLIPKNWENTYFHWIDN-LRDWCISRQLW-WGHRIPIWT 427 Query: 222 --DDPQY-------------------------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254 +DP+ ++ W + T G+ +N K K Sbjct: 428 NKNDPEKRICYDGEGVPPEVEANPDDWTQDDDVLDTWFSSSLWPFATLGWPENTPELK-K 486 Query: 255 FWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFIL----------- 297 F+P + + G DIL F W A ++ P P+ F HG I Sbjct: 487 FYPNSVLITGHDILFF----WVARMIFMGDYAMGEPPFPE-TFLHGLIYGKSYWRDAPGG 541 Query: 298 ------------------------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333 +K EK+SKS GN+IDP+E+IE+ G DA+R L Sbjct: 542 GIAYLSEKERMEYDLGKPLPSDVHYKWEKMSKSKGNIIDPLEIIEQYGTDAMRMAL---- 597 Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-------- 385 C + L +R DL N N + +L + G P + Sbjct: 598 -CVSATQAREIDLDRRRFEDLKN-FANKIWNGARFVLMNLKGNEHNPALTAQEFSQGVNF 655 Query: 386 -----SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438 D ILSV +RV++ + + + +A + Y + KP + K Sbjct: 656 SLLALEDRWILSVLNRVIKSVEQKLTTYQFDQAAQEAYDFFWRDFCSYYLEIAKPVLMGK 715 Query: 439 TN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + P S + ++ Q L+ P + ++F L Sbjct: 716 SGLPGERSNKQKLLAIILCQAIRLMHPMAPFITEELFHAL 755 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 25/115 (21%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80 H+GHA + D+L R+ R+ G + L+ GTD +AG+ T+ V++N Sbjct: 61 HMGHALVNTLQDILIRWKRMQGFETLWIPGTD-----------HAGIATQTVVERNLMKT 109 Query: 81 RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK----GCYSGWYSLR 131 V D S +DF++ + WK S+K +++ GC W LR Sbjct: 110 EGKRRV-DYSREDFLQRVQN---------WKDESEKVILHQLKSLGCSCDWSRLR 154 >gi|257886337|ref|ZP_05665990.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|257822193|gb|EEV49323.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,501] Length = 804 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%) Query: 3 EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 E+ K Y YP+ Q H+GH D+L+R R G +VL G D G + Sbjct: 29 EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G F +N FR + L SYD + TT+ ++ + ++ K+ +KG Sbjct: 89 ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148 Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177 Y+ + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 202 Query: 178 SYYE--SHPEFILPIER 192 E PE I ++R Sbjct: 203 DDLELVDWPESIKEMQR 219 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 20/185 (10%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 514 DYEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 EK+SKS GNV++P +V+E G D LR + + + ++GL+ G Sbjct: 574 NEKMSKSRGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLE---------GSR 624 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 + R +I+ + + M T +D + V + ++++ E+ +N + A++Q++ Sbjct: 625 KFLDRVWRLIVDENNKM--RDRITTLNDGKLDKVYHQTVKKVTEDYENLHFNTAISQLMV 682 Query: 420 LVSEV 424 ++E Sbjct: 683 FINEA 687 >gi|254382766|ref|ZP_04998123.1| valyl-tRNA synthetase [Streptomyces sp. Mg1] gi|194341668|gb|EDX22634.1| valyl-tRNA synthetase [Streptomyces sp. Mg1] Length = 792 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 79/153 (51%), Gaps = 8/153 (5%) Query: 253 AKFWPADLHVIGKDILRF---HAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLG 308 AKF+ D+ V G DI+ F + + + + +P K + G + +G+K+SKS G Sbjct: 397 AKFYSTDVLVTGHDIIFFWVARMMMFGLYAMDGEVPF-KTIALTGLVRDERGKKMSKSFG 455 Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368 NV+DP++ +++ G DA+R+ L + G D +D ++ N AN I N +R M Sbjct: 456 NVVDPLDWMDKYGSDAVRFTLAKGANPGTDVPIGEDWVQASRN--FANKIWN-ATRFALM 512 Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 +G +P P + +D ILS ++ + ++ Sbjct: 513 NGATVEGELPAPEEMSATDRWILSRLNKTVSQV 545 >gi|33601155|ref|NP_888715.1| isoleucyl-tRNA synthetase [Bordetella bronchiseptica RB50] gi|81431251|sp|Q7WKD5|SYI_BORBR RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|33575590|emb|CAE32668.1| isoleucyl-tRNA synthetase [Bordetella bronchiseptica RB50] Length = 953 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 13/202 (6%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284 VW D+ + + T G D G WPADL++ G D R FH+ +L + Sbjct: 546 VWFDSGSTHATVLGGKDGVLGGSHGAELAWPADLYLEGSDQHRGWFHSSLLTGCMLYGHP 605 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K + +HGF++ +G K+SKS+GNVI P +V + +G + LR ++ G+ D+ Sbjct: 606 PY-KGLLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGELSISDE 664 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQEI 401 + KRV + I N + R + + D+D G G E D L++ +++ E+ Sbjct: 665 --ILKRV-VESYRRIRNTL-RFLLANVADFDAVGQAVPYGELFEIDRYALAMTAQMQAEV 720 Query: 402 RENMQNQLIHRALAQVISLVSE 423 + + + H A++++ + SE Sbjct: 721 QGHYERYDFHPAVSRLQTFCSE 742 Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 16/135 (11%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------ 55 + R + + Y N HIGHA I+ D++ + + G D + G D HG Sbjct: 45 RGRPRFVLHDGPPYANGDIHIGHAVNKILKDIIVKSRNMAGYDAHYVPGWDCHGMPIEIQ 104 Query: 56 --QKIAKAAQNAGVTTKVF------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 +K K V +K +D+ ++F+ + VL ++ ++ D R Sbjct: 105 IEKKYGKHLPVTEVQSKARAYALEQIDRQRKDFKRLG-VLGDWHNPYLTMNFSNEADEIR 163 Query: 108 ILWKKISDKGDIYKG 122 +L +I +KG +++G Sbjct: 164 VL-GRILEKGYVFRG 177 >gi|313813083|gb|EFS50797.1| leucyl-tRNA synthetase [Propionibacterium acnes HL025PA1] Length = 826 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE+ Y+ AYP+ H+GHA I DVLAR+ RL G DVL G D G AA Sbjct: 38 RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +D + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y K ++ W D+ +++V G Q N QW +FR++ Y Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228 Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R S + D D + T+ D ++ V R + +I E ++ Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684 Query: 408 QLIHRALAQVISLVSEVDRYFDA 430 + +A+++ LV+ + D+ Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707 >gi|257888996|ref|ZP_05668649.1| leucyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257897590|ref|ZP_05677243.1| leucyl-tRNA synthetase [Enterococcus faecium Com12] gi|257825059|gb|EEV51982.1| leucyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257834155|gb|EEV60576.1| leucyl-tRNA synthetase [Enterococcus faecium Com12] Length = 804 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%) Query: 3 EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 E+ K Y YP+ Q H+GH D+L+R R G +VL G D G + Sbjct: 29 EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G F +N FR + L SYD + TT+ ++ + ++ K+ +KG Sbjct: 89 ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148 Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177 Y+ + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 202 Query: 178 SYYE--SHPEFILPIER 192 E PE I ++R Sbjct: 203 DDLELVDWPESIKEMQR 219 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 40/238 (16%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 514 DYEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 EK+SKS GNV++P +V+E G D LR + + + ++GL+ G Sbjct: 574 NEKMSKSRGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLE---------GSR 624 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 + R +I+ + + M T +D + V + ++++ E+ +N + A++Q++ Sbjct: 625 KFLDRVWRLIVDENNKM--RDRITTLNDGKLDKVYHQTVKKVTEDYENLHFNTAISQLMV 682 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++E A V + E I LL P + +++ IL Sbjct: 683 FINE--------------------AYKVDALPYEYIEGFVQLLAPIAPHMGEELWSIL 720 >gi|189083224|sp|A9WS85|SYL_RENSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS Length = 862 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 20/217 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62 +E+ Y+ YP+ H+GHA ++ DV+ R+ +L G DVL G D G AA Sbjct: 69 KERRYVCDMFPYPSGDLHMGHAEAFVMGDVVGRYWKLKGFDVLHPVGWDSFGLPAENAAI 128 Query: 63 -QNAGVT--TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 +NA T ++ + +F+ A + + + ++T++ ++ + L+ + ++G Sbjct: 129 KRNAHPAEWTYANIETQAASFKRYA--IGVDWSRRLQTSDPEYYRWTQWLFLRFYERGLA 186 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL-- 177 Y+ + +D +++V GA PV ++F+++ Y D+LL Sbjct: 187 YRKNSPVNWCPKDLTVLANEQVINGA----CERCGTPVTKKNLNQWYFKITDYADRLLDD 242 Query: 178 -SYYESH-PEFILPIER------RNEVISFVKSGLKD 206 + E H PE +L ++R + + FV G+ D Sbjct: 243 MAQLEGHWPERVLAMQRNWIGRSQGAHVDFVIDGMSD 279 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 61/245 (24%), Positives = 99/245 (40%), Gaps = 35/245 (14%) Query: 240 TTTGYLDNP-DGSKAKFWPA-DLHVIGKDILRFHAIYWPAF--------LLSANLPLPKK 289 T+ Y D P D + A W D +V G + H +Y F LL A P K Sbjct: 556 TSPEYTDGPFDPAAATRWMGVDQYVGGVEHAILHLLYSRFFVKVLNDLGLLEAKEPF-KA 614 Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 + + G +L+ G+ +SKSLGN +D + ++ GVDA+R +V A + D + Sbjct: 615 LLNQGQVLNGGKAMSKSLGNGVDLSQQLDRFGVDAVRLTMV--FASPPEDDVDWADVSPS 672 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 +A L S I G+ P G D ++ SV R L E + + Sbjct: 673 GSAKFLARAWRLAQDVTSEI-----GVDPATG-----DRALRSVTHRTLSEAADLIDAHK 722 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 + +A+ + LV+ + D+ +P E + +A++L F P Sbjct: 723 FNVVVAKTMELVNITRKSIDSG----CGPADP--------AVREAVEAVAVILSLFAPYT 770 Query: 470 ANKIF 474 A I+ Sbjct: 771 AEDIW 775 >gi|163840682|ref|YP_001625087.1| leucyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] gi|162954158|gb|ABY23673.1| leucyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] Length = 898 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 20/217 (9%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62 +E+ Y+ YP+ H+GHA ++ DV+ R+ +L G DVL G D G AA Sbjct: 105 KERRYVCDMFPYPSGDLHMGHAEAFVMGDVVGRYWKLKGFDVLHPVGWDSFGLPAENAAI 164 Query: 63 -QNAGVT--TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119 +NA T ++ + +F+ A + + + ++T++ ++ + L+ + ++G Sbjct: 165 KRNAHPAEWTYANIETQAASFKRYA--IGVDWSRRLQTSDPEYYRWTQWLFLRFYERGLA 222 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL-- 177 Y+ + +D +++V GA PV ++F+++ Y D+LL Sbjct: 223 YRKNSPVNWCPKDLTVLANEQVINGA----CERCGTPVTKKNLNQWYFKITDYADRLLDD 278 Query: 178 -SYYESH-PEFILPIER------RNEVISFVKSGLKD 206 + E H PE +L ++R + + FV G+ D Sbjct: 279 MAQLEGHWPERVLAMQRNWIGRSQGAHVDFVIDGMSD 315 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 61/245 (24%), Positives = 99/245 (40%), Gaps = 35/245 (14%) Query: 240 TTTGYLDNP-DGSKAKFWPA-DLHVIGKDILRFHAIYWPAF--------LLSANLPLPKK 289 T+ Y D P D + A W D +V G + H +Y F LL A P K Sbjct: 592 TSPEYTDGPFDPAAATRWMGVDQYVGGVEHAILHLLYSRFFVKVLNDLGLLEAKEPF-KA 650 Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349 + + G +L+ G+ +SKSLGN +D + ++ GVDA+R +V A + D + Sbjct: 651 LLNQGQVLNGGKAMSKSLGNGVDLSQQLDRFGVDAVRLTMV--FASPPEDDVDWADVSPS 708 Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409 +A L S I G+ P G D ++ SV R L E + + Sbjct: 709 GSAKFLARAWRLAQDVTSEI-----GVDPATG-----DRALRSVTHRTLSEAADLIDAHK 758 Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469 + +A+ + LV+ + D+ +P E + +A++L F P Sbjct: 759 FNVVVAKTMELVNITRKSIDSG----CGPADP--------AVREAVEAVAVILSLFAPYT 806 Query: 470 ANKIF 474 A I+ Sbjct: 807 AEDIW 811 >gi|72119932|gb|AAZ62195.1| leucyl-tRNA synthetase [Ralstonia eutropha JMP134] Length = 888 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 10/181 (5%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 KE+ K Y + + YP+ + H+GH I DV+AR+ R++G +VL G D G A Sbjct: 51 KEKPKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGNNVLMPMGWDAFGMPAENA 110 Query: 62 AQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117 A N GV + N + + M +D S + + T ++ + L+ K+ +KG Sbjct: 111 ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYRWNQWLFLKMLEKG 168 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y+ + + D+ +++V DG+ + + V+ E Y+ R++ Y ++LL Sbjct: 169 IAYRKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAI-VEKREIPMYYLRITDYAEELL 224 Query: 178 S 178 Sbjct: 225 G 225 >gi|327330752|gb|EGE72498.1| leucine--tRNA ligase [Propionibacterium acnes HL097PA1] Length = 826 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE+ Y+ AYP+ H+GHA I DVLAR+ RL G DVL G D G AA Sbjct: 38 RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +D + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y K ++ W D+ +++V G Q N QW +FR++ Y Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228 Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R S + D D + T+ D ++ V R + +I E ++ Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684 Query: 408 QLIHRALAQVISLVSEVDRYFDA 430 + +A+++ LV+ + D+ Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707 >gi|293553706|ref|ZP_06674329.1| leucyl-tRNA synthetase [Enterococcus faecium E1039] gi|291602132|gb|EFF32361.1| leucyl-tRNA synthetase [Enterococcus faecium E1039] Length = 804 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%) Query: 3 EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 E+ K Y YP+ Q H+GH D+L+R R G +VL G D G + Sbjct: 29 EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G F +N FR + L SYD + TT+ ++ + ++ K+ +KG Sbjct: 89 ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148 Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177 Y+ + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 202 Query: 178 SYYE--SHPEFILPIER 192 E PE I ++R Sbjct: 203 DDLELVDWPESIKEMQR 219 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 20/185 (10%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 514 DYEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 EK+SKS GNV++P +V+E G D LR + + + ++GL+ G Sbjct: 574 NEKMSKSRGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLE---------GSR 624 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 + R +I+ + + M T +D + V + ++++ E+ +N + A++Q++ Sbjct: 625 KFLDRVWRLIVDENNKM--RDRITTLNDGKLDKVYHQTVKKVTEDYENLHFNTAISQLMV 682 Query: 420 LVSEV 424 ++E Sbjct: 683 FINEA 687 >gi|159039402|ref|YP_001538655.1| valyl-tRNA synthetase [Salinispora arenicola CNS-205] gi|157918237|gb|ABV99664.1| valyl-tRNA synthetase [Salinispora arenicola CNS-205] Length = 872 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 27/261 (10%) Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRF---HAIYWPAFLLSA 282 ++ W + +T G+ + PD AKF+P + V G DIL F + + + + Sbjct: 450 VLDTWFSSALWPFSTLGWPEQTPD--LAKFYPTSVLVTGYDILFFWVARMMMFGLYAMDG 507 Query: 283 NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341 P V HG + + G+K+SKS GNV+DP++ I+ G DA R+ L R G D Sbjct: 508 RQPF-DVVALHGMVRDEHGKKMSKSFGNVVDPLDWIDRFGADATRFTLARGANPGGDVSV 566 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 ++ + N N + N +R + G +P+ + D ILS + V E Sbjct: 567 SEEWCQGSRN--FCNKLWN-ATRFALLNGAHTQGAMPSATELSTVDRWILSRLAHVTAEA 623 Query: 402 RENMQ--------NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453 E + L H A +V D Y + KP L P A T V Sbjct: 624 DEQFEAYEFGKVCELLYHFAWDEV------CDWYVELTKP-TLAGGGP-AADTTRRVLGH 675 Query: 454 VIRQLAILLQAFVPKLANKIF 474 V+ QL LL +P + +++ Sbjct: 676 VLDQLLRLLHPVIPFVTEELW 696 >gi|313837330|gb|EFS75044.1| leucyl-tRNA synthetase [Propionibacterium acnes HL037PA2] gi|314927996|gb|EFS91827.1| leucyl-tRNA synthetase [Propionibacterium acnes HL044PA1] gi|314971714|gb|EFT15812.1| leucyl-tRNA synthetase [Propionibacterium acnes HL037PA3] gi|328907122|gb|EGG26888.1| leucine--tRNA ligase [Propionibacterium sp. P08] Length = 826 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +E+ Y+ AYP+ H+GHA I DVLAR+ RL G DVL G D G AA Sbjct: 38 KERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +N + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIGTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y KG ++ W D+ +++V G Q N QW +FR++ Y Sbjct: 154 LAYRKGSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228 Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust. Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 26/208 (12%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R S + D D + T+SD ++ V R + +I E +++ Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDVDL------TQSDATLRQVTHRSIADITELLES 684 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 + +A+V+ LV+ + D+ +P V + A L P Sbjct: 685 GRYNVVVARVMELVNATRKAIDSG----CGPADPAVREAVTFT--------AQALSLVAP 732 Query: 468 KLANKIFDILFVADE--NRCFQSLDQRL 493 LA ++++IL + N + + DQ+L Sbjct: 733 YLAEEMWEILGLEPSVANSHWPTADQKL 760 >gi|289425157|ref|ZP_06426934.1| leucine--tRNA ligase [Propionibacterium acnes SK187] gi|289154135|gb|EFD02823.1| leucine--tRNA ligase [Propionibacterium acnes SK187] Length = 826 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE+ Y+ AYP+ H+GHA I DVLAR+ RL G DVL G D G AA Sbjct: 38 RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +D + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y K ++ W D+ +++V G Q N QW +FR++ Y Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R S + D D + T+ D ++ V R + +I E ++ Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684 Query: 408 QLIHRALAQVISLVSEVDRYFDA 430 + +A+++ LV+ + D+ Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707 >gi|150401370|ref|YP_001325136.1| isoleucyl-tRNA synthetase [Methanococcus aeolicus Nankai-3] gi|166229747|sp|A6UVK2|SYI_META3 RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|150014073|gb|ABR56524.1| isoleucyl-tRNA synthetase [Methanococcus aeolicus Nankai-3] Length = 1040 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/230 (26%), Positives = 117/230 (50%), Gaps = 17/230 (7%) Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPI 314 AD V G D + F++ + + ++ ++P KK HGF L + GEK+SKS+GNV++P Sbjct: 559 ADFIVEGNDQVTKWFYSQHALSEIVFDDIPY-KKCMMHGFTLDETGEKMSKSIGNVVNPD 617 Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDY 373 +V+EE G D LR++L+ +D + + + N + N S +V+ M+L D+ Sbjct: 618 DVVEEFGADLLRFYLLSANKAWEDLRFSIGEMNDV--KSVFNTLWNSYSFAVNYMVLDDF 675 Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDA-- 430 + D+ I+S + + +E E ++ +H +V + +++ R++ Sbjct: 676 SPNEEYFNYLRDEDKWIISKINSLTKEAIEVLEIPHLHEYTWKVRDFILNDLSRWYIKLI 735 Query: 431 -QKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 + W ++K +PD+ S LY V+ +L ++L P ++ KI+ L Sbjct: 736 RNRTW-MEKEDPDKLSAYQTLYY---VLMKLVVILAPVAPHISEKIYQNL 781 >gi|254455929|ref|ZP_05069358.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] gi|207082931|gb|EDZ60357.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] Length = 845 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 6/178 (3%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K ++K Y YP+ + H+GH I DVLAR+ L G +VL G D G A Sbjct: 29 KSKKKFYCLEMFPYPSGKIHMGHVRNYTIGDVLARYKSLQGYNVLHPMGWDSFGMPAENA 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDI 119 A+ ++ K + + N N + L +S +D I T ++ + + ++ DKG + Sbjct: 89 ARQNNLSPKDWTESNISNMKSQLKRLGLSIDWDREISTCSVDYYKHQQEFFLELYDKGLV 148 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y+ + D+ +++V G G AQ V+ + +FF ++ + ++LL Sbjct: 149 YRKEQDVNWDPVDQTVLANEQVIDGK-GWRSGAQ---VERKKLNQWFFNITKFSNELL 202 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 38/187 (20%), Positives = 85/187 (45%), Gaps = 33/187 (17%) Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 E +SKS N IDP +I G D++R F++ + KD + ++G+ + + Sbjct: 613 SESMSKSKKNTIDPENIINNYGADSVRLFILSDSPPEKDVQWSEEGI--AASHKFIQKLW 670 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN---QLIHRALAQ 416 L + + I KDY ++ + ++ ++ +++I N++N +I L + Sbjct: 671 TLHRKIIEEISKDYS---------EDASDELIKFTNKFIKKISNNLENFSYNIIVANLHE 721 Query: 417 VIS-LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475 + S L++E+ + + + ST+L + +++ I + +P L+N+ Sbjct: 722 MYSFLINEIGKGY--------------KKSTIL----DNYKKILITMNPIIPHLSNECLK 763 Query: 476 ILFVADE 482 I+ D+ Sbjct: 764 IIENTDK 770 >gi|261416197|ref|YP_003249880.1| isoleucyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372653|gb|ACX75398.1| isoleucyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326943|gb|ADL26144.1| isoleucine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 1061 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 17/234 (7%) Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGNVID 312 PAD G D R ++ +LS L P K V +G IL + G K+SKS N D Sbjct: 559 PADFIAEGLDQTR--GWFYTLTVLSNALFQKPAFKNVIVNGIILAEDGSKMSKSKRNYPD 616 Query: 313 PIEVIEEVGVDALRYFLVREIAC-GKDGFYDKDGLK---KRVNADLANGIGNLVSRSVSM 368 P ++IE G DA+R F++ A +D + ++G+K K+V L N + VS + Sbjct: 617 PNDLIERTGADAIRLFMINSAALKAEDLRFSEEGVKGIVKQVMLPLWNAVAFFVSNHNAD 676 Query: 369 ILKDYDGMIPTPGAFTESDESI----LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424 K + PG +SD + L+ + ++ M+ ++ + VI+ V ++ Sbjct: 677 AAKGQ--LTWKPGQEVKSDNELDRWMLATLQDLAAKVEVEMKAYRLYNVVPAVIAAVDDL 734 Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477 ++ + K+ D Y T+ +V+ + +L F+P LA +I+ IL Sbjct: 735 TNWYVRRSRRRFWKSENDGDKNAAYATMYKVLVDFSKILAPFLPLLAEEIYQIL 788 >gi|75760445|ref|ZP_00740486.1| Isoleucyl-tRNA synthetase, mupirocin resistant [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74492070|gb|EAO55245.1| Isoleucyl-tRNA synthetase, mupirocin resistant [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 1033 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++++ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G V+ G D HG Sbjct: 50 NGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHG 88 >gi|257900327|ref|ZP_05679980.1| leucyl-tRNA synthetase [Enterococcus faecium Com15] gi|257838239|gb|EEV63313.1| leucyl-tRNA synthetase [Enterococcus faecium Com15] Length = 804 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%) Query: 3 EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 E+ K Y YP+ Q H+GH D+L+R R G +VL G D G + Sbjct: 29 EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G F +N FR + L SYD + TT+ ++ + ++ K+ +KG Sbjct: 89 ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148 Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177 Y+ + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 202 Query: 178 SYYE--SHPEFILPIER 192 E PE I ++R Sbjct: 203 DDLELVDWPESIKEMQR 219 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 20/185 (10%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 514 DYEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 EK+SKS GNV++P +V+E G D LR + + + ++GL+ G Sbjct: 574 NEKMSKSRGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLE---------GSR 624 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 + R +I+ + + M T +D + V + ++++ E+ +N + A++Q++ Sbjct: 625 KFLDRVWRLIVDENNKM--RDRITTLNDGKLDKVYHQTVKKVTEDYENLHFNTAISQLMV 682 Query: 420 LVSEV 424 ++E Sbjct: 683 FINEA 687 >gi|206975087|ref|ZP_03236001.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97] gi|217959724|ref|YP_002338276.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187] gi|229138915|ref|ZP_04267494.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26] gi|206746508|gb|EDZ57901.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97] gi|217067167|gb|ACJ81417.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187] gi|228644540|gb|EEL00793.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26] Length = 1033 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++ + G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I DV+AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|163854090|ref|YP_001642133.1| valyl-tRNA synthetase [Methylobacterium extorquens PA1] gi|163665695|gb|ABY33062.1| valyl-tRNA synthetase [Methylobacterium extorquens PA1] Length = 906 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 12/127 (9%) Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277 + + DP ++ W + +T G+ D A+F+P + V GKDI+ +W A Sbjct: 464 VALTRDPD-VLDTWFSSALWPFSTLGWPDKTP-ELARFYPTNTLVTGKDII----FFWVA 517 Query: 278 FLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 ++ L L + LH KG K+SKS GNV+DP+++I+ G DALR+ L Sbjct: 518 RMMMMGLHLTDQAPFETVYLHTLVRDEKGAKMSKSKGNVVDPVDLIDRFGADALRFTLAA 577 Query: 332 EIACGKD 338 A G+D Sbjct: 578 LAAPGRD 584 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 13/69 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA I D+L RF R+ G DVL+ GTD +AG+ Sbjct: 39 SIVIPPPNVTGSLHMGHALNNTIQDILVRFERMRGKDVLWQPGTD-----------HAGI 87 Query: 68 TTKVFVDQN 76 T++ V++ Sbjct: 88 ATQMVVERK 96 >gi|69244089|ref|ZP_00602625.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Enterococcus faecium DO] gi|257880449|ref|ZP_05660102.1| leucyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257883262|ref|ZP_05662915.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257891521|ref|ZP_05671174.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257894538|ref|ZP_05674191.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|258614095|ref|ZP_05711865.1| leucyl-tRNA synthetase [Enterococcus faecium DO] gi|260562448|ref|ZP_05832958.1| leucyl-tRNA synthetase [Enterococcus faecium C68] gi|261206894|ref|ZP_05921584.1| leucyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289567063|ref|ZP_06447460.1| leucyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|293563981|ref|ZP_06678388.1| leucyl-tRNA synthetase [Enterococcus faecium E1162] gi|293569437|ref|ZP_06680733.1| leucyl-tRNA synthetase [Enterococcus faecium E1071] gi|294613887|ref|ZP_06693825.1| leucyl-tRNA synthetase [Enterococcus faecium E1636] gi|294619132|ref|ZP_06698624.1| leucyl-tRNA synthetase [Enterococcus faecium E1679] gi|294622191|ref|ZP_06701256.1| leucyl-tRNA synthetase [Enterococcus faecium U0317] gi|314943342|ref|ZP_07850117.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|314949258|ref|ZP_07852604.1| leucyl-tRNA synthetase [Enterococcus faecium TX0082] gi|314953916|ref|ZP_07856774.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|314993194|ref|ZP_07858575.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|314997356|ref|ZP_07862313.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|68196546|gb|EAN10972.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Enterococcus faecium DO] gi|257814677|gb|EEV43435.1| leucyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257818920|gb|EEV46248.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257827881|gb|EEV54507.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257830917|gb|EEV57524.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|260073133|gb|EEW61478.1| leucyl-tRNA synthetase [Enterococcus faecium C68] gi|260078872|gb|EEW66573.1| leucyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289161142|gb|EFD09045.1| leucyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|291587857|gb|EFF19709.1| leucyl-tRNA synthetase [Enterococcus faecium E1071] gi|291593252|gb|EFF24823.1| leucyl-tRNA synthetase [Enterococcus faecium E1636] gi|291594618|gb|EFF26003.1| leucyl-tRNA synthetase [Enterococcus faecium E1679] gi|291598288|gb|EFF29380.1| leucyl-tRNA synthetase [Enterococcus faecium U0317] gi|291604071|gb|EFF33598.1| leucyl-tRNA synthetase [Enterococcus faecium E1162] gi|313588570|gb|EFR67415.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|313592308|gb|EFR71153.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|313594115|gb|EFR72960.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|313597954|gb|EFR76799.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|313644357|gb|EFS08937.1| leucyl-tRNA synthetase [Enterococcus faecium TX0082] Length = 804 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%) Query: 3 EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 E+ K Y YP+ Q H+GH D+L+R R G +VL G D G + Sbjct: 29 EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G F +N FR + L SYD + TT+ ++ + ++ K+ +KG Sbjct: 89 ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148 Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177 Y+ + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 202 Query: 178 SYYE--SHPEFILPIER 192 E PE I ++R Sbjct: 203 DDLELVDWPESIKEMQR 219 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 20/185 (10%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 514 DYEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 EK+SKS GNV++P +V+E G D LR + + + ++GL+ G Sbjct: 574 NEKMSKSRGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLE---------GSR 624 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 + R +I+ + + M T +D + V + ++++ E+ +N + A++Q++ Sbjct: 625 KFLDRVWRLIVDENNKM--RDRITTLNDGKLDKVYHQTVKKVTEDYENLHFNTAISQLMV 682 Query: 420 LVSEV 424 ++E Sbjct: 683 FINEA 687 >gi|293571995|ref|ZP_06683008.1| leucyl-tRNA synthetase [Enterococcus faecium E980] gi|291607919|gb|EFF37228.1| leucyl-tRNA synthetase [Enterococcus faecium E980] Length = 804 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%) Query: 3 EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 E+ K Y YP+ Q H+GH D+L+R R G +VL G D G + Sbjct: 29 EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G F +N FR + L SYD + TT+ ++ + ++ K+ +KG Sbjct: 89 ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148 Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177 Y+ + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 202 Query: 178 SYYE--SHPEFILPIER 192 E PE I ++R Sbjct: 203 DDLELVDWPESIKEMQR 219 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 20/185 (10%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 514 DYEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 EK+SKS GNV++P +V+E G D LR + + + ++GL+ G Sbjct: 574 NEKMSKSRGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLE---------GSR 624 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 + R +I+ + + M T +D + V + ++++ E+ +N + A++Q++ Sbjct: 625 KFLDRVWRLIVDENNKM--RDRITTLNDGKLDKVYHQTVKKVTEDYENLHFNTAISQLMV 682 Query: 420 LVSEV 424 ++E Sbjct: 683 FINEA 687 >gi|240141544|ref|YP_002966024.1| valine tRNA synthetase [Methylobacterium extorquens AM1] gi|240011521|gb|ACS42747.1| valine tRNA synthetase [Methylobacterium extorquens AM1] Length = 906 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 12/127 (9%) Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277 + + DP ++ W + +T G+ D A+F+P + V GKDI+ +W A Sbjct: 464 VALTRDPD-VLDTWFSSALWPFSTLGWPDKTP-ELARFYPTNTLVTGKDII----FFWVA 517 Query: 278 FLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 ++ L L + LH KG K+SKS GNV+DP+++I+ G DALR+ L Sbjct: 518 RMMMMGLHLTDQAPFETVYLHTLVRDEKGAKMSKSKGNVVDPVDLIDRFGADALRFTLAA 577 Query: 332 EIACGKD 338 A G+D Sbjct: 578 LAAPGRD 584 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 13/69 (18%) Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA I D+L RF R+ G DVL+ GTD +AG+ Sbjct: 39 SIVIPPPNVTGSLHMGHALNNTIQDILVRFERMRGRDVLWQPGTD-----------HAGI 87 Query: 68 TTKVFVDQN 76 T++ V++ Sbjct: 88 ATQMVVERK 96 >gi|158321607|ref|YP_001514114.1| leucyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] gi|166980073|sp|A8MJY6|SYL_ALKOO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|158141806|gb|ABW20118.1| leucyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] Length = 802 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 15/184 (8%) Query: 2 KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K++EK Y YP+ Q H+GH DV++R RL+G +VL+ G D G Sbjct: 29 KDKEKFYALIEFPYPSGQGLHVGHPRPYTALDVVSRKRRLEGYNVLYPMGWDAFGLPTEN 88 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118 A + KV +QN F+ L +S+D I TT+ ++ + ++ K+ +KG Sbjct: 89 YAIKNKIHPKVVTEQNVARFKKQLQGLGMSFDWSREINTTDPEYYKWTQWIFLKLFEKGL 148 Query: 119 IYKGCYS-GWYSLRDEAYYNDDEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQD 174 YK S W + N++ V G + + Q N QWM +++ Y + Sbjct: 149 AYKKEMSINWCTSCKVGLANEEVVNGGCERCGAEVVRKQKN--QWM------LKITEYAE 200 Query: 175 KLLS 178 +L++ Sbjct: 201 RLIN 204 Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 11/84 (13%) Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSHGFIL-HKGEKIS 304 +W P D + G + H +Y W FL + P K+ SHG IL EK+S Sbjct: 524 YWMPIDWYNGGMEHTTLHLLYSRFWHKFLYDCGVVPSCEPYQKRT-SHGMILGENNEKMS 582 Query: 305 KSLGNVIDPIEVIEEVGVDALRYF 328 KS GNVI+P +++ E G D LR + Sbjct: 583 KSRGNVINPDDIVTEFGADTLRLY 606 >gi|227550269|ref|ZP_03980318.1| leucine--tRNA ligase [Enterococcus faecium TX1330] gi|227180594|gb|EEI61566.1| leucine--tRNA ligase [Enterococcus faecium TX1330] Length = 837 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%) Query: 3 EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 E+ K Y YP+ Q H+GH D+L+R R G +VL G D G + Sbjct: 62 EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 121 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G F +N FR + L SYD + TT+ ++ + ++ K+ +KG Sbjct: 122 ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 181 Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177 Y+ + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 182 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 235 Query: 178 SYYE--SHPEFILPIER 192 E PE I ++R Sbjct: 236 DDLELVDWPESIKEMQR 252 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 40/238 (16%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 547 DYEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 606 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 EK+SKS GNV++P +V+E G D LR + + + ++GL+ G Sbjct: 607 NEKMSKSRGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLE---------GSR 657 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 + R +I+ + + M T +D + V + ++++ E+ +N + A++Q++ Sbjct: 658 KFLDRVWRLIVDENNKM--RDRITTLNDGKLDKVYHQTVKKVTEDYENLHFNTAISQLMV 715 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 ++E A V + E I LL P + +++ IL Sbjct: 716 FINE--------------------AYKVDALPYEYIEGFVQLLAPIAPHMGEELWSIL 753 >gi|15644113|ref|NP_229162.1| isoleucyl-tRNA synthetase [Thermotoga maritima MSB8] gi|6226709|sp|P46213|SYI_THEMA RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|4981921|gb|AAD36431.1|AE001790_3 isoleucyl-tRNA synthetase [Thermotoga maritima MSB8] Length = 919 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 12/104 (11%) Query: 230 VWIDALTNY-LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286 VWID+ ++ TT D+P +P D+++ G D R FH+ + A + P Sbjct: 526 VWIDSGASFEYITTKREDHP-------FPLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPY 578 Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 K+V +HGFI +G K+SKSLGNV+DP+EV+E+ G + LR +L Sbjct: 579 -KEVLTHGFIKDEQGRKMSKSLGNVVDPMEVVEKYGAEILRLWL 621 >gi|228900803|ref|ZP_04065018.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222] gi|228858729|gb|EEN03174.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222] Length = 1033 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++++ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 22/39 (56%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 N PH+GHA I D++AR+ + G V+ G D HG Sbjct: 50 NGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHG 88 >gi|207092570|ref|ZP_03240357.1| valyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1] Length = 643 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/116 (38%), Positives = 61/116 (52%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN I N S Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAAS 590 Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + D+LAR+ R+DG L+ G D G Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90 >gi|314940361|ref|ZP_07847523.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|313640401|gb|EFS04981.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133a04] Length = 804 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%) Query: 3 EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 E+ K Y YP+ Q H+GH D+L+R R G +VL G D G + Sbjct: 29 EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G F +N FR + L SYD + TT+ ++ + ++ K+ +KG Sbjct: 89 ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148 Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177 Y+ + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 202 Query: 178 SYYE--SHPEFILPIER 192 E PE I ++R Sbjct: 203 DDLELVDWPESIKEMQR 219 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 20/185 (10%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+++ G IL Sbjct: 514 DYEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 EK+SKS GNV++P +V+E G D LR + + + ++GL+ G Sbjct: 574 NEKMSKSRGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLE---------GSR 624 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 + R +I+ + + M T +D + V + ++++ E+ +N + A++Q++ Sbjct: 625 KFLDRVWRLIVDENNKM--RDRITTLNDGKLDKVYHQTVKKVTEDYENLHFNTAISQLMV 682 Query: 420 LVSEV 424 ++E Sbjct: 683 FINEA 687 >gi|293377848|ref|ZP_06624032.1| putative leucyl-tRNA synthetase [Enterococcus faecium PC4.1] gi|292643532|gb|EFF61658.1| putative leucyl-tRNA synthetase [Enterococcus faecium PC4.1] Length = 486 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%) Query: 3 EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 E+ K Y YP+ Q H+GH D+L+R R G +VL G D G + Sbjct: 29 EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119 A + G F +N FR + L SYD + TT+ ++ + ++ K+ +KG Sbjct: 89 ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148 Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177 Y+ + W N++ + ++ Y+ P+ QWM +++AY D+LL Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 202 Query: 178 SYYE--SHPEFILPIER 192 E PE I ++R Sbjct: 203 DDLELVDWPESIKEMQR 219 >gi|116872981|ref|YP_849762.1| valyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741859|emb|CAK20983.1| valyl-tRNA synthetase, putative [Listeria welshimeri serovar 6b str. SLCC5334] Length = 882 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 8/179 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D + F+P + V G DI+ F + + + + Sbjct: 449 VLDTWFSSALWPFSTMGWPDTENQDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 508 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG + +G K+SKSLGN +DPIEVI++ G D+LRY L + G+D + Sbjct: 509 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSF 567 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEI 401 + ++ N N I N SR V M L D I SD+ IL+ + +Q + Sbjct: 568 EKVESTWN--FINKIWN-ASRFVLMNLNDMKYSEIDLTKVSEVSDKWILTRLNETIQAV 623 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 44 SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 98 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ + SR F D Y DFIR T + D Sbjct: 99 EAKLKENNISRYDLGREKFIDKTWEWKEEYADFIREQWEKLGLGLDYSRERFTLDDGLSD 158 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + ++ + +KG IY+G Y W A + + ++K +G +Y+ ++ Sbjct: 159 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 209 >gi|161611254|ref|YP_297039.2| leucyl-tRNA synthetase [Ralstonia eutropha JMP134] gi|189083223|sp|Q46XD8|SYL_RALEJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS Length = 873 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 10/181 (5%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 KE+ K Y + + YP+ + H+GH I DV+AR+ R++G +VL G D G A Sbjct: 36 KEKPKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGNNVLMPMGWDAFGMPAENA 95 Query: 62 AQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117 A N GV + N + + M +D S + + T ++ + L+ K+ +KG Sbjct: 96 ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYRWNQWLFLKMLEKG 153 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y+ + + D+ +++V DG+ + + V+ E Y+ R++ Y ++LL Sbjct: 154 IAYRKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAI-VEKREIPMYYLRITDYAEELL 209 Query: 178 S 178 Sbjct: 210 G 210 >gi|197117146|ref|YP_002137573.1| leucyl-tRNA synthetase [Geobacter bemidjiensis Bem] gi|238690875|sp|B5EE39|SYL_GEOBB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|197086506|gb|ACH37777.1| leucyl-tRNA synthetase [Geobacter bemidjiensis Bem] Length = 824 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 9/194 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R+K Y+ YP+ + H+GH I DV+ARF R+ G +VL G D G AA Sbjct: 32 RKKYYLLEMFPYPSGKIHMGHVRNYSIGDVIARFKRMQGYNVLHPMGWDAFGMPAENAAI 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + +N R L +SY D + T + ++ + ++ ++ KG YK Sbjct: 92 QHKSHPAKWTYENIAYMRGQLKTLGLSYDWDRELATCDLDYYKWEQRIFLEMYKKGLAYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 + + + E +++V DG + +PVQ E E + FR++ Y +LL Sbjct: 152 KSSAVNWCPKCETVLANEQV---EDGCCWRCD-SPVQQKELEQWSFRITNYAQELLDDTY 207 Query: 179 YYESHPEFILPIER 192 PE +L ++R Sbjct: 208 KLTGWPERVLTMQR 221 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 26/235 (11%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKG 300 D K + W P D ++ G + H +Y F L N+ P + + G ++ G Sbjct: 520 DREKVEAWMPVDQYIGGIEHAVLHLLYARFFTKVLRDLGYCNVDEPFSNLLTQGMVIKDG 579 Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360 K+SKS GNV+DP +IE G D R F + KD + G+ N + Sbjct: 580 AKMSKSKGNVVDPNALIERYGADTARLFSLFAAPPEKDLDWSDQGVDGSYR--FLNRVWR 637 Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419 LV + +I D PG + + + ++++ E+++ + + A+A V+ Sbjct: 638 LVYDVLPVI---GDAGAVNPGELGAEAKKLRRAVHKTIKKVSEDVEERFHFNTAIAAVME 694 Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 LV+ + + F A K P+ + V V+R LL FVP A +++ Sbjct: 695 LVNAI-QAFSA-------KDAPENVAVVREAVESVVR----LLAPFVPNFAEELW 737 >gi|71083652|ref|YP_266372.1| valine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062] gi|90101540|sp|Q4FM20|SYV_PELUB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|71062765|gb|AAZ21768.1| valine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062] Length = 875 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 22/275 (8%) Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269 ++K ++ + + DP ++ W + T G+ DN + KF+P + V G DI+ Sbjct: 433 AKKFYNKDVDLIRDPD-VLDTWFSSGLWPFATLGWPDNKEYVD-KFYPTSVLVTGFDIIF 490 Query: 270 FHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323 F W A ++ + K V+ H + KG+K+SKS GNVI+P+++IE+ D Sbjct: 491 F----WVARMIMFGMEFLDKEPFKDVYVHALVKDEKGQKMSKSKGNVINPLDLIEKYSAD 546 Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVN--ADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 ALR+ L+ + G D +D +K N L N L++ + D+ + P Sbjct: 547 ALRFTLLSMASPGTDVKLSEDRVKGYRNFLNKLWNANNFLITNNC-----DFSKIDEKPI 601 Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT 439 ++ I + +I +N+++ A S D Y + K L Sbjct: 602 LSININKWIYAELIETKNKIEKNLKDYRFDEAAKNAYQFTWHSYCDWYLELSKT-ILFSE 660 Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + V V+ V +Q+ ILL F+P + +I+ Sbjct: 661 DEKAKDEVRQVSAYVFKQILILLHPFIPFVTEEIW 695 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 26/129 (20%) Query: 4 REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + K S I PN H+GHA I D+L R+HR++ + L+ GTD Sbjct: 29 KNKKQFSVVIPPPNVTGSLHMGHALNNSIQDLLVRYHRMNNYETLWQPGTD--------- 79 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHHDTCRILWKKISDKGD 118 +AG+ T+ V++ + D D +I + FI ++ H D KK+ Sbjct: 80 --HAGIATQALVEK--KLTADGIDKNEIGREKFIEKVWEWKEEHGDIILNQLKKL----- 130 Query: 119 IYKGCYSGW 127 GC W Sbjct: 131 ---GCSCDW 136 >gi|297617834|ref|YP_003702993.1| leucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297145671|gb|ADI02428.1| leucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 825 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 20/192 (10%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K + K Y YP+ H+GH I DV+ARF ++G +VL G D G A Sbjct: 30 KTKPKYYDLEMFPYPSGNLHMGHVRNYAIGDVVARFKTMNGYNVLHPMGWDAFGLPAENA 89 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGD 118 A G+ ++ D N N + L ISYD +F T + ++ + L+ K+ + G Sbjct: 90 AIKHGIHPSIWTDSNIENMKRQLKSLGISYDWTREFA-TCKPEYYRFTQWLFLKLYENGL 148 Query: 119 IYKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 YK C S L +E + D G V+ E +FF+++ Y Sbjct: 149 AYKKKAAVNWCPSCATVLANEQVVDGDCERCGTR----------VEKKSLEQWFFKITDY 198 Query: 173 QDKLLSYYESHP 184 ++LL+ + P Sbjct: 199 AERLLNDLDKLP 210 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/245 (20%), Positives = 105/245 (42%), Gaps = 33/245 (13%) Query: 246 DNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGF 295 D P D +W P D ++ G + H +Y F L+S P + + G Sbjct: 517 DRPWDKEAVDYWMPVDQYIGGVEHAILHLMYSRFFTKVLYDLGLVSCEEPF-TNLLTQGM 575 Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355 +L G K+SKS GN + P ++I G D R F++ KD + G++ Sbjct: 576 VLKDGAKMSKSKGNTVSPEDIINTYGADTARLFILFASPPEKDLEWSDQGVEGCYR--FL 633 Query: 356 NGIGNLVSRSVSMI--LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHR 412 N + LV+ + + ++ Y G + +D + ++++ E+++ + + Sbjct: 634 NRVWRLVAEYSNQVRGVEAYGG----GSNLSAADRELRYRTHFTIKKVTEDIEKRFNFNT 689 Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472 A++ ++ LV+ + +Y D + L V E ++ L ++L F P +A + Sbjct: 690 AISAIMELVNALYQYKDNEH-------------QNLAVVKEALKALVLVLSPFSPHIAEE 736 Query: 473 IFDIL 477 +++ + Sbjct: 737 LWEAI 741 >gi|229121748|ref|ZP_04250969.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus 95/8201] gi|228661664|gb|EEL17283.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus 95/8201] Length = 1033 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++E+ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ +V+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHDVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I DV+AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|170289257|ref|YP_001739495.1| isoleucyl-tRNA synthetase [Thermotoga sp. RQ2] gi|170176760|gb|ACB09812.1| isoleucyl-tRNA synthetase [Thermotoga sp. RQ2] Length = 920 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 12/104 (11%) Query: 230 VWIDALTNY-LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286 VWID+ ++ TT D+P +P D+++ G D R FH+ + A + P Sbjct: 527 VWIDSGASFEYITTKREDHP-------FPLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPY 579 Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 K+V +HGFI +G K+SKSLGNV+DP+EV+E+ G + LR +L Sbjct: 580 -KEVLTHGFIKDEQGRKMSKSLGNVVDPMEVVEKYGAEILRLWL 622 >gi|148270551|ref|YP_001245011.1| isoleucyl-tRNA synthetase [Thermotoga petrophila RKU-1] gi|166229777|sp|A5IML2|SYI_THEP1 RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|147736095|gb|ABQ47435.1| Isoleucyl-tRNA synthetase [Thermotoga petrophila RKU-1] Length = 919 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 12/104 (11%) Query: 230 VWIDALTNY-LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286 VWID+ ++ TT D+P +P D+++ G D R FH+ + A + P Sbjct: 526 VWIDSGASFEYITTKREDHP-------FPLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPY 578 Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 K+V +HGFI +G K+SKSLGNV+DP+EV+E+ G + LR +L Sbjct: 579 -KEVLTHGFIKDEQGRKMSKSLGNVVDPMEVVEKYGAEILRLWL 621 >gi|329116643|ref|ZP_08245360.1| valine--tRNA ligase [Streptococcus parauberis NCFD 2020] gi|326907048|gb|EGE53962.1| valine--tRNA ligase [Streptococcus parauberis NCFD 2020] Length = 883 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDTDAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TDQRPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556 Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 88 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 89 ATQAKVEERLR 99 >gi|281412859|ref|YP_003346938.1| isoleucyl-tRNA synthetase [Thermotoga naphthophila RKU-10] gi|281373962|gb|ADA67524.1| isoleucyl-tRNA synthetase [Thermotoga naphthophila RKU-10] Length = 919 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 12/104 (11%) Query: 230 VWIDALTNY-LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286 VWID+ ++ TT D+P +P D+++ G D R FH+ + A + P Sbjct: 526 VWIDSGASFEYITTKREDHP-------FPLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPY 578 Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329 K+V +HGFI +G K+SKSLGNV+DP+EV+E+ G + LR +L Sbjct: 579 -KEVLTHGFIKDEQGRKMSKSLGNVVDPMEVVEKYGAEILRLWL 621 >gi|163759464|ref|ZP_02166549.1| valyl-tRNA synthetase [Hoeflea phototrophica DFL-43] gi|162283061|gb|EDQ33347.1| valyl-tRNA synthetase [Hoeflea phototrophica DFL-43] Length = 947 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/268 (26%), Positives = 115/268 (42%), Gaps = 25/268 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D K +++ D+ V G DI+ F W A ++ L Sbjct: 518 VLDTWFSSALWPFSTLGWPDKTPELK-RYYQTDVLVTGFDIIFF----WVARMMMMGLHF 572 Query: 287 PKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V+ H + K G K+SKS GNVIDP+E+I+E G DALR+ L A G+D Sbjct: 573 MDEEPFHTVYVHALVRDKNGAKMSKSKGNVIDPLELIDEYGADALRFTLAIMAAQGRDVK 632 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 D + N + N +R M D A + IL+ +R E Sbjct: 633 LDPSRIAGYRN--FGTKLWN-ATRFADMNGAVLDPAFDPASAKLTINRWILTELTRTAAE 689 Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP---WELKKTNPDRASTVLYVTVEVI 455 +RE ++ + A A + V D Y + KP E + + + YV E + Sbjct: 690 VREAIEGYKFNEASAALYRFVWNQLCDWYLELLKPVFNGEDEAAKVEARACAAYVLAESV 749 Query: 456 RQLAILLQAFVPKLANKIFDILFVADEN 483 + LL F+P + +++ L A EN Sbjct: 750 K----LLHPFMPFMTEELWAHL--AGEN 771 >gi|134300354|ref|YP_001113850.1| leucyl-tRNA synthetase [Desulfotomaculum reducens MI-1] gi|189082997|sp|A4J7H2|SYL_DESRM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|134053054|gb|ABO51025.1| leucyl-tRNA synthetase [Desulfotomaculum reducens MI-1] Length = 827 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 6/178 (3%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ER K Y YP+ + H+GH I DV+ARF + G DVL G D G AA Sbjct: 31 ERPKYYCLEMFPYPSGKLHMGHVRNYSIGDVVARFKTMQGYDVLHPMGWDAFGLPAENAA 90 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 G+ + N + R L +SYD + T ++ + L+ ++ KG Y Sbjct: 91 IKHGIAPATWTWDNIAHMRSQLKQLGLSYDWNREVATCHTEYYKWGQWLFLQLYKKGLCY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 K + +++V GA + V+ E + +FFR++ Y +LL+ Sbjct: 151 KKHARVNWCPDCATVLANEQVVDGACERCSAV----VEQKELDQWFFRITEYAQRLLN 204 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 60/262 (22%), Positives = 114/262 (43%), Gaps = 32/262 (12%) Query: 228 MYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAF----- 278 M ++D+ YL T D D +KA W D ++ G + H +Y F Sbjct: 496 MDTFVDSSWYYLRYTSSRDTEYAWDKNKADRWMNVDQYIGGVEHAILHLLYSRFFTKVFY 555 Query: 279 ---LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 L++ P + + + G +L G K+SKS GNV+ P E+I+ G D R F++ Sbjct: 556 DLGLVNVQEPF-ENLLTQGMVLKDGSKMSKSKGNVVSPEEIIDRYGADTARMFILFAAPP 614 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--MIPTPGAFTESDESILSV 393 +D + G++ ++ N V R V + + G I + A+ + + + Sbjct: 615 ERDLEWSDRGVEG------SHRFLNRVWRLVYSLKDEVAGAPAISSVNAYVGVHKEMRRL 668 Query: 394 CSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452 ++++ E++ + + A++ ++ LV+ + Y D K +R + VL Sbjct: 669 THYAIKKVTEDVSGRFNFNTAISTIMELVNGIYTYRD-------KVAAVERDTAVL---A 718 Query: 453 EVIRQLAILLQAFVPKLANKIF 474 E + ILL F P +A +++ Sbjct: 719 EAVNSTIILLAPFAPHIAEELW 740 >gi|315077594|gb|EFT49650.1| leucyl-tRNA synthetase [Propionibacterium acnes HL053PA2] gi|327452996|gb|EGE99650.1| leucyl-tRNA synthetase [Propionibacterium acnes HL092PA1] Length = 826 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE+ Y+ AYP+ H+GHA I DVLAR+ RL G DVL G D G AA Sbjct: 38 RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +D + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y K ++ W D+ +++V G Q N QW +FR++ Y Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDIDQIEGKWPERVLSMQR 228 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R S + D D + T+ D ++ V R + +I E ++ Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684 Query: 408 QLIHRALAQVISLVSEVDRYFDA 430 + +A+++ LV+ + D+ Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707 >gi|187250670|ref|YP_001875152.1| valyl-tRNA synthetase [Elusimicrobium minutum Pei191] gi|186970830|gb|ACC97815.1| Valyl-tRNA synthetase [Elusimicrobium minutum Pei191] Length = 904 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 21/174 (12%) Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIY 274 G DP ++ W + ++T G+ P+ +K F+P V G +IL Sbjct: 465 GTDFVQDPD-VLDTWFSSALWPISTLGW---PEKTKELEYFYPTSTMVTGYEILYL---- 516 Query: 275 WPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRY 327 W A + + LP K VF +G I K G+K+SKSLGNVIDP+++ + G DA+R+ Sbjct: 517 WVARMAITGIDFTGKLPF-KDVFLNGIIRDKTGKKMSKSLGNVIDPLDMTAKYGTDAVRF 575 Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381 L+ + GKD Y ++ + N N I N SR + M + D G + P Sbjct: 576 SLLMQAVLGKDIPYAEESIVGARN--FCNKIYN-ASRFILMNMGDLKGPLKMPA 626 >gi|229582044|ref|YP_002840443.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51] gi|228012760|gb|ACP48521.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51] Length = 980 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 26/265 (9%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289 VW D+ + + G + + P DL + G D LR W LL + L L K Sbjct: 456 VWFDSGVAFFASLG--KDWQEKWKELGPVDLVLEGHDQLRG----WFFSLLRSGLILLDK 509 Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YD 342 V HGF+L +G ++ KSLGN ++P VI+ G D LR +L+R F + Sbjct: 510 APYVSVLVHGFMLDEQGREMHKSLGNYVEPSVVIQRYGRDILRLWLLRNTTWEDARFSWR 569 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESILSVCSRVL 398 L KR DL V S+ M L +++ + T + D ILS + +L Sbjct: 570 ALELTKR---DLQIIWNTYVFASMYMNLDNFEPVKYTLDDVIKYAKIEDLWILSRFNSML 626 Query: 399 QEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEV 454 +++ E+M+N +H +I+ LV +V R++ ++ W + N + Y+ + Sbjct: 627 KKVNESMKNYKVHEMANYLINFLVEDVSRFYIRLIRKRAW--IEANTQDKIAMYYILYFI 684 Query: 455 IRQLAILLQAFVPKLANKIFDILFV 479 ++Q IL +P ++ KI+ V Sbjct: 685 LKQCIILASTIIPFISEKIYKSFVV 709 >gi|311896027|dbj|BAJ28435.1| putative valyl-tRNA synthetase [Kitasatospora setae KM-6054] Length = 879 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 8/152 (5%) Query: 254 KFWPADLHVIGKDILRF---HAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGN 309 KF+P D+ + G DI+ F + + + + +P K V G + + G+K+SKS GN Sbjct: 485 KFYPTDVLLTGHDIIFFWVARMMMFGLYAMDGEIPF-KTVALTGLVRDQFGKKMSKSTGN 543 Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369 +DP++ ++ G DA+R+ L R G D +D +K N N I N +R M Sbjct: 544 AVDPLDWMDAYGADAVRFTLARGANPGADVPIGEDWVKGSRN--FCNKIWN-ATRFALMN 600 Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 G +P P T +D ILS + + E+ Sbjct: 601 GATVRGPLPAPEELTAADRWILSRLNSTVTEV 632 Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 24/140 (17%) Query: 5 EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58 EK + I PN H+GHA++ + D L R R+ G + L+ G D G K+ Sbjct: 51 EKPAYTIVIPPPNVTGALHLGHAFQHTLMDALTRRKRMLGFEALWLPGMDHAGIATQNKV 110 Query: 59 AKAAQNAGVT-----TKVFVDQ--------NSR---NFRDMADVLDISYDDFIRTTEKRH 102 + AG++ FVD+ R R + D +D S + F T ++ Sbjct: 111 EQQLAEAGLSRHDLGRAAFVDKVWEWKENYGGRILGQMRRLGDGVDWSRERF--TMDEGL 168 Query: 103 HDTCRILWKKISDKGDIYKG 122 + ++KK+ D G IY+ Sbjct: 169 SQAVQTIFKKLFDDGLIYRA 188 >gi|254821843|ref|ZP_05226844.1| valyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950] Length = 882 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 74/306 (24%), Positives = 118/306 (38%), Gaps = 60/306 (19%) Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240 ++D ++SR+ + WG +IP DP ++ W + + Sbjct: 407 MRDWTISRQLW-WGHRIPIWYGPNGEQVCVGPDETPPEGWEQDPD-VLDTWFSSALWPFS 464 Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------------------SA 282 T G+ D KF+P + V G DIL +W A ++ Sbjct: 465 TLGWPDKTP-ELEKFYPTSVLVTGYDIL----FFWVARMMMFGTFVGDDDAITLDGRRGP 519 Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341 +P VF HG I G K+SKS GNVIDP++ +E G DALR+ L R + G D Sbjct: 520 QVPF-TDVFLHGLIRDESGRKMSKSKGNVIDPLDWVELFGADALRFTLARGASPGGDLAI 578 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401 +D + R + + + N + +++ +P P T++D IL V E+ Sbjct: 579 GEDHV--RASRNFCTKLFN--ATRYALLNGAQLASLPPPAELTDADRWILGRLEEVRAEV 634 Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461 N RA + D + D W ++ A V + T + L L Sbjct: 635 DSAFDNYEFSRACEALYHFA--WDEFCD----WYVELAKTQLAEGVAHTTAVLAATLDTL 688 Query: 462 LQAFVP 467 L+ P Sbjct: 689 LRLLHP 694 >gi|224499788|ref|ZP_03668137.1| valyl-tRNA synthetase [Listeria monocytogenes Finland 1988] Length = 883 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D F+P + V G DI+ F + + + + Sbjct: 450 VLDTWFSSALWPFSTMGWPDTESPDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG + +G K+SKSLGN +DPIEVI++ G D+LRY L + G+D + Sbjct: 510 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399 + ++ N N I N SR V M L DGM I SD+ IL+ + +Q Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYNEIDLSNVTEVSDKWILTRLNETIQ 622 Query: 400 EI 401 + Sbjct: 623 AV 624 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 45 SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 99 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ SR NF D Y +FIR T + D Sbjct: 100 EAKLKESNISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 159 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + ++ + +KG IY+G Y W A + + ++K +G +Y+ ++ Sbjct: 160 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210 >gi|149012557|ref|ZP_01833554.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] gi|147763362|gb|EDK70299.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] Length = 883 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392 + + + N N I N +SR + M + D + T A +D IL Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615 Query: 393 VCSRVLQEIREN 404 + + ++ EN Sbjct: 616 NLNETIAKVTEN 627 Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107 G++ TKV + D+ + ++ M +D S + F T ++ R Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|289548809|ref|YP_003473797.1| valyl-tRNA synthetase [Thermocrinis albus DSM 14484] gi|289182426|gb|ADC89670.1| valyl-tRNA synthetase [Thermocrinis albus DSM 14484] Length = 1144 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/277 (24%), Positives = 122/277 (44%), Gaps = 46/277 (16%) Query: 233 DALTNYLTTT----GYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 D L + ++ G P+ +K ++ +P DL V G DI+ +W A ++ + Sbjct: 707 DVLDTWFSSALWPFGVWGYPEKTKDLSELYPTDLLVTGFDII----FFWVARMVMMGMHF 762 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIA 334 K V+ H + KG+K+SK+ GNVIDP+++IE+ G DALR+ L R+I Sbjct: 763 MKDIPFRDVYIHALVRDEKGQKMSKTKGNVIDPLDIIEKYGADALRFTLSILTQQGRDIK 822 Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 + F +G K AN + N + + +D +P D I ++ Sbjct: 823 LSEKRF---EGYKH-----FANKLWNAARFVLMNLQEDLLANLPMCAPPRWEDLWITTLL 874 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV-----------SEVDRYFDAQKPWELKKTNPDR 443 + ++E+ E ++ RA ++ V S++ Y + + P +K Sbjct: 875 NETVKEVNEALERYDFSRACQKIYDFVWSEFCDWYIEMSKIRLYAEGEDP-SVKGEKLTA 933 Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480 +T+L V V+R LL F+P + +++ L A Sbjct: 934 QATLLRVLDTVLR----LLHPFMPFITEELWRHLPTA 966 >gi|225868079|ref|YP_002744027.1| valyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] gi|225701355|emb|CAW98405.1| valyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] Length = 883 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDTDAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-KKVFS----HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +K FS HG I +G K+SKSLGN IDP+++IE G DALR+FL A G+D Sbjct: 499 TGRKPFSNVLIHGLIRDQEGRKMSKSLGNGIDPMDIIETYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ + E + +V+ Sbjct: 559 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEQATANVEQVVSG 603 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ ++ I L ++I V+E Sbjct: 604 AAGNVTDRWILHNLNEMIGKVTE 626 Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust. Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 23/167 (13%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 AIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVTT----------KV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 G++ KV + D+ + ++ L +S D+ R T ++ R Sbjct: 100 EQGISRYDLGRDKFLDKVWEWKDEYAATIKEQWGKLGLSL-DYARDRFTLDEGLSKAVRK 158 Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ KG IY+G + W A + + ++K +G +Y+ + Sbjct: 159 VFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|196039843|ref|ZP_03107147.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99] gi|196029546|gb|EDX68149.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99] Length = 1033 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++E+ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ +V+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHDVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I DV+AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|295696445|ref|YP_003589683.1| isoleucyl-tRNA synthetase [Bacillus tusciae DSM 2912] gi|295412047|gb|ADG06539.1| isoleucyl-tRNA synthetase [Bacillus tusciae DSM 2912] Length = 928 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 10/107 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284 IM VW D+ ++++ + WPAD+++ G D R F++ A + Sbjct: 527 IMDVWFDSGSSHMAVL------ERRPELRWPADMYLEGSDQHRGWFNSSLSTAVAVKGQA 580 Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 P + V +HGF+L +G K+SKSLGNV+DP+EV++ +G D LR ++ Sbjct: 581 PY-RAVLTHGFLLDGEGRKMSKSLGNVVDPLEVMDRLGADILRLWVA 626 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 2/100 (2%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 + R K + Y N H+GHA I+ D++ +F +DG + + G D HG I A Sbjct: 45 RGRPKFILHDGPPYANGNIHVGHALNKILKDMIVKFKTMDGFEAPYVPGWDTHGLPIEHA 104 Query: 62 AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101 + + +D FR+M + Y D R KR Sbjct: 105 IIKSKNLNRHEID--VLEFREMCRQYALEYIDRQRGQFKR 142 >gi|284801943|ref|YP_003413808.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284995085|ref|YP_003416853.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|284057505|gb|ADB68446.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284060552|gb|ADB71491.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5923] Length = 883 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D F+P + V G DI+ F + + + + Sbjct: 450 VLDTWFSSALWPFSTMGWPDTESPDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG + +G K+SKSLGN +DPIEVI++ G D+LRY L + G+D + Sbjct: 510 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399 + ++ N N I N SR V M L DGM I SD+ IL+ + +Q Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYNEIDLSNVTEVSDKWILTRLNETIQ 622 Query: 400 EI 401 + Sbjct: 623 AV 624 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 45 SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 99 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ SR NF D Y +FIR T + D Sbjct: 100 EAKLKESNISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 159 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + ++ + +KG IY+G Y W A + + ++K +G +Y+ ++ Sbjct: 160 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210 >gi|182683501|ref|YP_001835248.1| valyl-tRNA synthetase [Streptococcus pneumoniae CGSP14] gi|303255236|ref|ZP_07341309.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|303260058|ref|ZP_07346031.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|303261242|ref|ZP_07347190.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|303263907|ref|ZP_07349828.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS397] gi|303267057|ref|ZP_07352928.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|303269272|ref|ZP_07355046.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|182628835|gb|ACB89783.1| valyl-tRNA synthetase [Streptococcus pneumoniae CGSP14] gi|301801447|emb|CBW34135.1| valyl-tRNA synthetase [Streptococcus pneumoniae INV200] gi|302597777|gb|EFL64850.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|302637376|gb|EFL67863.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|302638753|gb|EFL69215.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|302641169|gb|EFL71542.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|302643385|gb|EFL73661.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|302646312|gb|EFL76538.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS397] Length = 883 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392 + + + N N I N +SR + M + D + T A +D IL Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615 Query: 393 VCSRVLQEIREN 404 + + ++ EN Sbjct: 616 NLNETIAKVTEN 627 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107 G++ TKV + D+ + ++ M +D S + F T ++ R Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|254831953|ref|ZP_05236608.1| valyl-tRNA synthetase [Listeria monocytogenes 10403S] Length = 883 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D F+P + V G DI+ F + + + + Sbjct: 450 VLDTWFSSALWPFSTMGWPDTESPDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG + +G K+SKSLGN +DPIEVI++ G D+LRY L + G+D + Sbjct: 510 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399 + ++ N N I N SR V M L DGM I SD+ IL+ + +Q Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYNEIDLSNVTEVSDKWILTRLNETIQ 622 Query: 400 EI 401 + Sbjct: 623 AV 624 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 45 SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 99 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ SR NF D Y +FIR T + D Sbjct: 100 EAKLKESNISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 159 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + ++ + +KG IY+G Y W A + + ++K +G +Y+ ++ Sbjct: 160 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210 >gi|148998241|ref|ZP_01825710.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|168576529|ref|ZP_02722403.1| valyl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|307067188|ref|YP_003876154.1| Valyl-tRNA synthetase [Streptococcus pneumoniae AP200] gi|147755884|gb|EDK62928.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|183577726|gb|EDT98254.1| valyl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|306408725|gb|ADM84152.1| Valyl-tRNA synthetase [Streptococcus pneumoniae AP200] Length = 883 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392 + + + N N I N +SR + M + D + T A +D IL Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615 Query: 393 VCSRVLQEIREN 404 + + ++ EN Sbjct: 616 NLNETIAKVTEN 627 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107 G++ TKV + D+ + ++ M +D S + F T ++ R Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|228933508|ref|ZP_04096361.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826237|gb|EEM72017.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 1033 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++E+ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ +V+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHDVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I DV+AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|168482808|ref|ZP_02707760.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|172043865|gb|EDT51911.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] Length = 883 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392 + + + N N I N +SR + M + D + T A +D IL Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615 Query: 393 VCSRVLQEIREN 404 + + ++ EN Sbjct: 616 NLNETIAKVTEN 627 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107 G++ TKV + D+ + ++ M +D S + F T ++ R Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|313889902|ref|ZP_07823543.1| valine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] gi|313121750|gb|EFR44848.1| valine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] Length = 883 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDTEAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 + V HG I +G K+SKSLGN IDP++V+E+ G DALR+FL A G+D Sbjct: 499 TNERPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVVEKYGADALRWFLSNGSAPGQD 556 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 23/164 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT----------TKV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 G+T KV + D+ + ++ + IS D+ R T ++ R Sbjct: 100 EQGITRYDLGREKFLEKVWEWKDEYAATIKEQWGKMGISV-DYSRERFTLDEGLSKAVRK 158 Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYN 151 ++ + KG IY+G + W A + + ++K +G +Y+ Sbjct: 159 VFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYH 202 >gi|312136597|ref|YP_004003934.1| valyl-tRNA synthetase [Methanothermus fervidus DSM 2088] gi|311224316|gb|ADP77172.1| valyl-tRNA synthetase [Methanothermus fervidus DSM 2088] Length = 876 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/259 (25%), Positives = 109/259 (42%), Gaps = 26/259 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284 ++ W+D+ + L G+ P + K +PA+L G DI+R A Y L+ Sbjct: 451 VLDTWMDSSISPLVVAGW---PQKNYRKLFPANLRPQGHDIIRTWAFYTILRCKALTGEK 507 Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG------KD 338 P + V + G K+SKS GNVI+P EV+E+ G DALR + + KD Sbjct: 508 PFDEIVINGMVFGEDGHKMSKSRGNVIEPEEVLEKYGADALRLWAANSVPGSDVPFAWKD 567 Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSM-ILKDYDGMIPTPGAFTESDESILSVCSRV 397 Y L+K NA R +S+ I K+ + + D ILS +R+ Sbjct: 568 VKYGYKFLRKFWNA----------FRFMSIHIFKEEENEV--EAKLNYMDRWILSKLNRL 615 Query: 398 LQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455 ++ + +++ A+ + V V D Y +A K N + +V+ Sbjct: 616 VENVTKSINQYNFADAITNIQQFVWHVFCDEYIEAVKYRLYSDENKEMREGAKRTLEKVL 675 Query: 456 RQLAILLQAFVPKLANKIF 474 + LL FVP +++ Sbjct: 676 KTCLKLLAPFVPHFVEEVY 694 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 29/53 (54%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 +R I T YP H+GH + D++ARF R++G +VLF G D HG Sbjct: 33 KRPSYVIDTPPPYPTGSIHMGHVLNWVYMDIIARFKRMNGFNVLFPQGWDCHG 85 >gi|47096717|ref|ZP_00234302.1| valyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|254898281|ref|ZP_05258205.1| valyl-tRNA synthetase [Listeria monocytogenes J0161] gi|254912226|ref|ZP_05262238.1| valyl-tRNA synthetase [Listeria monocytogenes J2818] gi|254936554|ref|ZP_05268251.1| valyl-tRNA synthetase [Listeria monocytogenes F6900] gi|47014901|gb|EAL05849.1| valyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|258609148|gb|EEW21756.1| valyl-tRNA synthetase [Listeria monocytogenes F6900] gi|293590201|gb|EFF98535.1| valyl-tRNA synthetase [Listeria monocytogenes J2818] Length = 883 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D F+P + V G DI+ F + + + + Sbjct: 450 VLDTWFSSALWPFSTMGWPDTESPDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG + +G K+SKSLGN +DPIEVI++ G D+LRY L + G+D + Sbjct: 510 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399 + ++ N N I N SR V M L DGM I SD+ IL+ + +Q Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYNEIDLSNVTEVSDKWILTRLNETIQ 622 Query: 400 EI 401 + Sbjct: 623 AV 624 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 45 SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 99 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ SR NF D Y +FIR T + D Sbjct: 100 EAKLKESNISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 159 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + ++ + +KG IY+G Y W A + + ++K +G +Y+ ++ Sbjct: 160 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210 >gi|332076405|gb|EGI86868.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA41301] Length = 883 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392 + + + N N I N +SR + M + D + T A +D IL Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615 Query: 393 VCSRVLQEIREN 404 + + ++ EN Sbjct: 616 NLNETIAKVTEN 627 Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107 G++ TKV + D+ + ++ M +D S + F T ++ R Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVNLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|315282473|ref|ZP_07870879.1| valyl-tRNA synthetase [Listeria marthii FSL S4-120] gi|313613881|gb|EFR87619.1| valyl-tRNA synthetase [Listeria marthii FSL S4-120] Length = 883 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D F+P + V G DI+ F + + + + Sbjct: 450 VLDTWFSSALWPFSTMGWPDTESPDFKHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG + +G K+SKSLGN +DPIEVI++ G D+LRY L + G+D + Sbjct: 510 PF-KDTLIHGLVRDXEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399 + ++ N N I N SR V M L DGM I SD+ IL+ + +Q Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYSEIDLTNVTEVSDKWILTRLNETIQ 622 Query: 400 EI 401 + Sbjct: 623 AV 624 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 27/169 (15%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + Sbjct: 45 SVVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAKVEAKLK 104 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTC 106 A ++ D NF D Y +FIR T + D Sbjct: 105 EANISR---YDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSDAV 161 Query: 107 RILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + ++ + +KG IY+G Y W A + + ++K +G +Y+ ++ Sbjct: 162 KKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210 >gi|237650162|ref|ZP_04524414.1| valyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974] gi|237821761|ref|ZP_04597606.1| valyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2] Length = 883 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392 + + + N N I N +SR + M + D + T A +D IL Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615 Query: 393 VCSRVLQEIREN 404 + + ++ EN Sbjct: 616 NLNETIAKVTEN 627 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107 G++ TKV + D+ + ++ M +D S + F T ++ R Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|228914790|ref|ZP_04078399.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845109|gb|EEM90151.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 1033 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++E+ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ +V+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHDVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I DV+AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|148990086|ref|ZP_01821340.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] gi|147924612|gb|EDK75699.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] Length = 883 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392 + + + N N I N +SR + M + D + T A +D IL Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615 Query: 393 VCSRVLQEIREN 404 + + ++ EN Sbjct: 616 NLNETIAKVTEN 627 Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107 G+T TKV + D+ + ++ M +D S + F T ++ R Sbjct: 100 GEGITRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|16803592|ref|NP_465077.1| valyl-tRNA synthetase [Listeria monocytogenes EGD-e] gi|224501508|ref|ZP_03669815.1| valyl-tRNA synthetase [Listeria monocytogenes FSL R2-561] gi|81508987|sp|Q8Y6X9|SYV_LISMO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|16410981|emb|CAC99630.1| valyl-tRNA synthetase [Listeria monocytogenes EGD-e] Length = 883 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D F+P + V G DI+ F + + + + Sbjct: 450 VLDTWFSSALWPFSTMGWPDTESPDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG + +G K+SKSLGN +DPIEVI++ G D+LRY L + G+D + Sbjct: 510 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399 + ++ N N I N SR V M L DGM I SD+ IL+ + +Q Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYNEIDLSNVTEVSDKWILTRLNETIQ 622 Query: 400 EI 401 + Sbjct: 623 AV 624 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 45 SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 99 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ SR NF D Y +FIR T + D Sbjct: 100 EAKLKESNISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 159 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + ++ + +KG IY+G Y W A + + ++K +G +Y+ ++ Sbjct: 160 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210 >gi|15902536|ref|NP_358086.1| valyl-tRNA synthetase [Streptococcus pneumoniae R6] gi|116516342|ref|YP_816000.1| valyl-tRNA synthetase [Streptococcus pneumoniae D39] gi|81450080|sp|Q8DQU7|SYV_STRR6 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|15458063|gb|AAK99296.1| Valyl-tRNA synthetase [Streptococcus pneumoniae R6] gi|116076918|gb|ABJ54638.1| valyl-tRNA synthetase [Streptococcus pneumoniae D39] Length = 883 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392 + + + N N I N +SR + M + D + T A +D IL Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615 Query: 393 VCSRVLQEIREN 404 + + ++ EN Sbjct: 616 NLNETIAKVTEN 627 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107 G++ TKV + D+ + ++ M +D S + F T ++ R Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|323474747|gb|ADX85353.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus REY15A] Length = 980 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 26/265 (9%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289 VW D+ + + G + + P DL + G D LR W LL + L L K Sbjct: 456 VWFDSGVAFFASLG--KDWQEKWKELGPVDLVLEGHDQLRG----WFFSLLRSGLILLDK 509 Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YD 342 V HGF+L +G ++ KSLGN ++P VI+ G D LR +L+R F + Sbjct: 510 APYVSVLVHGFMLDEQGREMHKSLGNYVEPSVVIQRYGRDILRLWLLRNTTWEDARFSWR 569 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESILSVCSRVL 398 L KR DL V S+ M L +++ + T + D ILS + +L Sbjct: 570 ALELTKR---DLQIIWNTYVFASMYMNLDNFEPVKYTLDDVIKYAKIEDLWILSRFNSML 626 Query: 399 QEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEV 454 +++ E+M+N +H +I+ LV +V R++ ++ W + N + Y+ + Sbjct: 627 KKVNESMKNYKVHEMANYLINFLVEDVSRFYIRLIRKRAW--IEANTQDKIAMYYILYFI 684 Query: 455 IRQLAILLQAFVPKLANKIFDILFV 479 ++Q IL +P ++ KI+ V Sbjct: 685 LKQWIILASTIIPFISEKIYKSFVV 709 >gi|225867757|ref|YP_002743705.1| leucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] gi|259511552|sp|C0MET9|SYL_STRS7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|225701033|emb|CAW97815.1| leucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] Length = 833 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 14/197 (7%) Query: 4 REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + K Y YP+ A H+GH D+L+RF R G +VL G D G + A Sbjct: 31 KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N NF+ + L SY D I TT+ ++ + ++ K+ +KG Y Sbjct: 91 MDTGNDPAEFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGLAY 150 Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 + W A N++ + G G Y + QWM +++AY ++LL Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204 Query: 178 SYYES--HPEFILPIER 192 + E PE I ++R Sbjct: 205 ADLEEVDWPESIKDMQR 221 >gi|194398081|ref|YP_002037231.1| valyl-tRNA synthetase [Streptococcus pneumoniae G54] gi|194357748|gb|ACF56196.1| valyl-tRNA synthetase [Streptococcus pneumoniae G54] Length = 883 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392 + + + N N I N +SR + M + D + T A +D IL Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615 Query: 393 VCSRVLQEIREN 404 + + ++ EN Sbjct: 616 NLNETIAKVTEN 627 Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107 G+T TKV + D+ + ++ M +D S + F T ++ R Sbjct: 100 GEGITRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|254828213|ref|ZP_05232900.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|258600602|gb|EEW13927.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] Length = 883 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D F+P + V G DI+ F + + + + Sbjct: 450 VLDTWFSSALWPFSTMGWPDTESPDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG + +G K+SKSLGN +DPIEVI++ G D+LRY L + G+D + Sbjct: 510 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568 Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399 + ++ N N I N SR V M L DGM I SD+ IL+ + +Q Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYNEIDLSNVTEVSDKWILTRLNETIQ 622 Query: 400 EI 401 + Sbjct: 623 AV 624 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 45 SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 99 Query: 68 TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104 K+ SR NF D Y +FIR T + D Sbjct: 100 EAKLKESNISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 159 Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 + ++ + +KG IY+G Y W A + + ++K +G +Y+ ++ Sbjct: 160 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210 >gi|149021523|ref|ZP_01835578.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] gi|147930219|gb|EDK81204.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] Length = 883 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392 + + + N N I N +SR + M + D + T A +D IL Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615 Query: 393 VCSRVLQEIREN 404 + + ++ EN Sbjct: 616 NLNETIAKVTEN 627 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107 G++ TKV + D+ + ++ M +D S + F T ++ R Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|15678792|ref|NP_275909.1| valyl-tRNA synthetase [Methanothermobacter thermautotrophicus str. Delta H] gi|2621857|gb|AAB85270.1| valyl-tRNA synthetase [Methanothermobacter thermautotrophicus str. Delta H] Length = 897 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 5/120 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284 ++ W+D+ + L+ G+ PD S + +PADL G DI+R A Y L+ Sbjct: 475 VLDTWMDSSISPLSVAGW---PDESYRELFPADLRPQGHDIIRTWAFYTILRCMALTGEK 531 Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 P + V + G K+SKS GNVI P EV+E+ G DALR + + F KD Sbjct: 532 PFSEIVINGMVFGEDGHKMSKSRGNVIAPEEVLEDYGADALRLWAAGSVPGSDVPFAWKD 591 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 16/114 (14%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 + + I T YP H+GH + D++ARF R+ G DVLF G D H Sbjct: 56 KPRYIIDTPPPYPTGSIHMGHVLNWVYMDIIARFKRMRGFDVLFPQGWDCH--------- 106 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117 G+ T+V V++ + N + D+S ++F R + + R++ +++ G Sbjct: 107 --GLPTEVKVEE-THNIKKS----DVSREEFRRLCVELTQENIRMMKEQMQRLG 153 >gi|149002240|ref|ZP_01827182.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] gi|147759555|gb|EDK66546.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] Length = 883 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392 + + + N N I N +SR + M + D + T A +D IL Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615 Query: 393 VCSRVLQEIREN 404 + + ++ EN Sbjct: 616 NLNETIAKVTEN 627 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107 G++ TKV + D+ + ++ M +D S + F T ++ R Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|313200359|ref|YP_004039017.1| leucyl-tRNA synthetase [Methylovorus sp. MP688] gi|312439675|gb|ADQ83781.1| leucyl-tRNA synthetase [Methylovorus sp. MP688] Length = 826 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 9/195 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ K Y + YP+ + H+GH I DVL+RFHR+ G +V+ G D G AA Sbjct: 31 DKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVLSRFHRMKGFNVMQPMGWDAFGLPAENAA 90 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120 V + N + + L + D I T + ++ + L+ ++ KG IY Sbjct: 91 IKNNVAPAGWTYSNIEHMKSQLKSLGLGIDWQREIATCKPEYYRWEQWLFTELFKKGLIY 150 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178 K + + D+ +++V DG+ + + V+ + YF +++AY D+LL+ Sbjct: 151 KKTATVNWDPVDQTVLANEQVI---DGRGWRS-GAIVEKRDIPQYFMKITAYADELLADL 206 Query: 179 -YYESHPEFILPIER 192 E PE + ++R Sbjct: 207 DKLEGWPEQVKTMQR 221 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302 +A +W P D ++ G + H +Y F LL + P K+ + G +L G K Sbjct: 523 RANYWLPVDQYIGGIEHAILHLLYARFFNKLMRDVGLLKNDEPF-NKLLTQGMVLKDGSK 581 Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330 +SKS GN +DP +IE+ G D R F++ Sbjct: 582 MSKSKGNTVDPQALIEQYGADTARLFMM 609 >gi|168492725|ref|ZP_02716868.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] gi|225854110|ref|YP_002735622.1| valyl-tRNA synthetase [Streptococcus pneumoniae JJA] gi|183577078|gb|EDT97606.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] gi|225723634|gb|ACO19487.1| valyl-tRNA synthetase [Streptococcus pneumoniae JJA] Length = 883 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392 + + + N N I N +SR + M + D + T A +D IL Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615 Query: 393 VCSRVLQEIREN 404 + + ++ EN Sbjct: 616 NLNETIAKVTEN 627 Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107 G+T TKV + D+ + ++ M +D S + F T ++ R Sbjct: 100 GEGITRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|20094335|ref|NP_614182.1| isoleucyl-tRNA synthetase [Methanopyrus kandleri AV19] gi|74560178|sp|Q8TWY2|SYI_METKA RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|19887391|gb|AAM02112.1| Isoleucyl-tRNA synthetase [Methanopyrus kandleri AV19] Length = 1080 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/287 (24%), Positives = 131/287 (45%), Gaps = 47/287 (16%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLD---------------NPDGSKAKFWPADLHVI 263 ++PD ++ VW+D+ + GY +PD +A AD Sbjct: 535 RVPD----VLDVWVDSGVAAWASLGYPRREDEFERWFLKEGRCDPDDPEAG---ADFITE 587 Query: 264 GKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV 320 G D R F++ + P + V HGF L +G K+SKSLGNV+DP++V+E+ Sbjct: 588 GHDQTRGWFYSQLGCGVVTFDTCPY-RTVLMHGFTLDEEGRKMSKSLGNVVDPMDVVEKY 646 Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380 G D LR++++R A +D + ++ A N + N + + + + D P Sbjct: 647 GADTLRWYVLRSNAPWRDMHFSWQDVRDTHRA--LNVLWN--AYRFTKMYSELDEFDPEE 702 Query: 381 GAFTESDES-------ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYF---D 429 + +E +LS + +++E+ + + +H A + V+E + R++ Sbjct: 703 HPLEDLEEHLKPEDRWLLSRINSLVEEVTDAFERYHVHEAARALYRFVTEDLSRWYIRLV 762 Query: 430 AQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIF 474 ++ W L+ +P++ + VL+ T + +L LL VP +A +I+ Sbjct: 763 RERVW-LEGDDPEKLAVYAVLHYTFD---RLVRLLAPIVPHVAERIY 805 >gi|304316679|ref|YP_003851824.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778181|gb|ADL68740.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 927 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 65/109 (59%), Gaps = 14/109 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---- 282 IM VW D+ ++++ L+ +G + WPADL++ G D H ++ + LL++ Sbjct: 529 IMDVWFDSGSSHVAV---LETTEGLR---WPADLYLEGSDQ---HRGWFQSSLLTSVATR 579 Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330 + K V +HGF++ +G K+SKSLGN IDP +V++E G D LR + V Sbjct: 580 GMAPYKNVLTHGFVVDGEGRKMSKSLGNGIDPADVVKEYGADILRLWTV 628 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 29/61 (47%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 K +EK + Y N H+G A ++ D++ ++ + G D + G D HG I + Sbjct: 45 KGKEKFILHDGPPYANGDIHLGTAMNKVLKDMIVKYKTMRGFDAPYVPGWDTHGLPIEQQ 104 Query: 62 A 62 A Sbjct: 105 A 105 >gi|302534400|ref|ZP_07286742.1| valyl-tRNA synthetase [Streptomyces sp. C] gi|302443295|gb|EFL15111.1| valyl-tRNA synthetase [Streptomyces sp. C] Length = 873 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 82/329 (24%), Positives = 141/329 (42%), Gaps = 55/329 (16%) Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------DDPQY---- 226 I P+E +V + L D +SR+ + WG +IP + P Sbjct: 391 IHPVEMEKRYFDWVDN-LNDWCISRQLW-WGHRIPVWYGPDGEVVCVGPDEEAPSGGGWT 448 Query: 227 ----IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRF---HAIYWPAF 278 ++ W + +T G+ + PD AKF+ D+ V G DI+ F + + + Sbjct: 449 QDTDVLDTWFSSGLWPFSTLGWPEKTPD--LAKFYSTDVLVTGHDIIFFWVARMMMFGLY 506 Query: 279 LLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337 + +P K + G + +G+K+SKS GNV+DP++ +++ G DA+R+ L + G Sbjct: 507 AMDGEVPF-KTIALTGLVRDERGKKMSKSFGNVVDPLDWMDKYGSDAVRFTLAKGANPGT 565 Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397 D +D ++ ++ AN I N +R M +G +P + +D ILS ++ Sbjct: 566 DVPIGEDWVQ--ASSKFANKIWN-ATRFALMNGATIEGELPPAEQLSATDRWILSRLNKT 622 Query: 398 LQEIR---ENMQNQLIHRALAQVISLVSEVDRYFDAQKPW--ELKKT----NPDRASTVL 448 + ++ E+ Q + AL D FD W EL KT ++A Sbjct: 623 VAQVDGYYEDFQFSKLSEALYHFA-----WDEVFD----WYVELSKTTFFAGGEQAKVSS 673 Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477 V EVI + LL VP + ++ L Sbjct: 674 RVLGEVIDVMLRLLHPVVPFVTETLWTTL 702 >gi|228927261|ref|ZP_04090323.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228832408|gb|EEM77983.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 1033 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++E+ G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ +V+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHDVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I DV+AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|212546259|ref|XP_002153283.1| leucyl-tRNA synthetase [Penicillium marneffei ATCC 18224] gi|210064803|gb|EEA18898.1| leucyl-tRNA synthetase [Penicillium marneffei ATCC 18224] Length = 996 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 11/197 (5%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +R K YI + YP+ H+GH I+DVL+RF+++ G DVL G D G AA Sbjct: 92 DRPKSYILSMFPYPSGTMHMGHLRVYTISDVLSRFYKMRGHDVLHPIGWDAFGLPAENAA 151 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119 GV + QN + +D + + + + + T RI + +KG Sbjct: 152 IERGVQPAEWTVQNIERMKVQLRSFGPGFDWERELMTCSPEFYKHTQRIFL-MLYEKGLA 210 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 Y+ Y D+ +++V A+G + + V+ ++ + +FFR++A++++LL Sbjct: 211 YQAEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEQLKLKQWFFRITAFKEELLKD 267 Query: 180 YES----HPEFILPIER 192 +S PE +L ++R Sbjct: 268 LDSLSGGWPERVLSMQR 284 >gi|207109742|ref|ZP_03243904.1| valyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1] Length = 161 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL +W A +L + LP K ++ H + KGEK+SKS Sbjct: 24 FYPNTTLITGFDIL----FFWVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 78 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN I N S Sbjct: 79 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAAS 132 >gi|229918362|ref|YP_002887008.1| valyl-tRNA synthetase [Exiguobacterium sp. AT1b] gi|229469791|gb|ACQ71563.1| valyl-tRNA synthetase [Exiguobacterium sp. AT1b] Length = 883 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 27/265 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 451 VLDTWFSSALWPFSTMGWPDADAPDFNRYFPTSALVTGYDIIFF----WVSRMIFQSLEF 506 Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 K V HG I +G K+SKSLGN +DP+EVI++ G D+LR+FL+ G D Sbjct: 507 TGKQPFNDVLIHGLIRDSEGRKMSKSLGNGVDPMEVIDQYGADSLRWFLLTGSTPGNDLR 566 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSR 396 + + ++ N AN I N + L + DG+ I G T +D+ IL+ + Sbjct: 567 FYWEKIESTWN--FANKIWN----ASRFALMNMDGLKVEDIDLTGEKTLADKWILTRLND 620 Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTV 452 + ++ + A + + + E + Y + K L D A+ T V Sbjct: 621 TIDQVTRLVDKYEFGEAGRYLYNFIWEEFCNWYIEMAK---LTLYGEDEAAKHTTRSVLA 677 Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477 + + L+ F+P L +I+ L Sbjct: 678 HTLDSIMRLMHPFMPFLTEEIWQHL 702 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 23/167 (13%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 + I PN + H+GHA++ + D+L R R+ G DVL+ G D G K+ + + Sbjct: 45 TIVIPPPNVTGKLHLGHAWDTTLQDLLTRLKRMQGYDVLWLPGMDHAGIATQAKVEQKLR 104 Query: 64 NAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 GV T + D+ ++ RD L + D+ R T ++ + Sbjct: 105 EEGVMRYDLGREKFLEKTWEWKDEYAKTIRDQWSKLGLGL-DYSRERFTLDEGLSKAVQE 163 Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ +KG IY+G Y W + A + + +Y+ +G +Y+ ++ Sbjct: 164 VFVRLYEKGLIYRGEYIVNWDPAQKTAVSDIEVIYQEVEGAFYHMKY 210 >gi|124265411|ref|YP_001019415.1| leucyl-tRNA synthetase [Methylibium petroleiphilum PM1] gi|189030288|sp|A2SC91|SYL_METPP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|124258186|gb|ABM93180.1| leucyl-tRNA synthetase [Methylibium petroleiphilum PM1] Length = 897 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 6/177 (3%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K Y + + YP+ + H+GH I D++AR+ R+ G +VL G D G AA Sbjct: 39 RPKFYACSMLPYPSGKLHMGHVRNYTINDMMARYLRMKGYNVLMPMGWDAFGLPAENAAI 98 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + V + N + + L +++D + T + ++ + + K+ +KG YK Sbjct: 99 DKKVAPAQWTRDNIADMKSQMQPLGLAFDWSREVATCDPDYYKWNQWFFLKLLEKGIAYK 158 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 + D+ +++V DG+ + + PV+ E GY+ ++ Y D+LL+ Sbjct: 159 KTQVVNWDPVDQTVLANEQVI---DGRGWRSG-APVERREIPGYYLAITQYADELLA 211 >gi|221231401|ref|YP_002510553.1| valyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] gi|220673861|emb|CAR68364.1| valyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] Length = 883 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392 + + + N N I N +SR + M + D + T A +D IL Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYIFMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615 Query: 393 VCSRVLQEIREN 404 + + ++ EN Sbjct: 616 NLNETIAKVTEN 627 Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107 G+T TKV + D+ + ++ M +D S + F T ++ R Sbjct: 100 GEGITRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|34557968|ref|NP_907783.1| valyl-tRNA synthetase [Wolinella succinogenes DSM 1740] gi|81653436|sp|Q7M8H7|SYV_WOLSU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|34483686|emb|CAE10683.1| VALYL-TRNA SYNTHETASE [Wolinella succinogenes] Length = 894 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 109/252 (43%), Gaps = 53/252 (21%) Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189 L+++ Y E ++ G+ Y N V+ + +F + Q K + S P Sbjct: 349 LQEKGYIEKIEEHENQVGKCYRC-GNVVEPYISKQWFVKKEVAQ-KAIERINSGEAAFYP 406 Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------- 221 + +N +++K L+D +SR+ + WG +IP Sbjct: 407 AQWKNNYNAWMKE-LRDWCISRQLW-WGHQIPVYYCDCGHEWASETTPSHCPKCQGSQFH 464 Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILRFHAI 273 DP ++ W + +T G+ + G + +F+P L + G DIL F Sbjct: 465 QDPD-VLDTWFSSALWPFSTLGWGNGEAGKGSWWREEDLQEFYPNSLLITGFDILFF--- 520 Query: 274 YWPAFLLSA------NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALR 326 W A +L NLP K ++ H + KG+K+SKS GNVIDP+E+IE+ G D+ R Sbjct: 521 -WVARMLMMGEHFLDNLPF-KDIYLHALVRDEKGQKMSKSKGNVIDPLELIEKYGCDSTR 578 Query: 327 YFLVREIACGKD 338 + L A G+D Sbjct: 579 FTLAILCAQGRD 590 Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 21/35 (60%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + D++ R+ R+DG L+ GTD G Sbjct: 76 HIGHALNHTLIDIMTRYKRMDGYKTLWQPGTDHAG 110 >gi|168490541|ref|ZP_02714684.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] gi|183574795|gb|EDT95323.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] Length = 883 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392 + + + N N I N +SR + M + D + T A +D IL Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615 Query: 393 VCSRVLQEIREN 404 + + ++ EN Sbjct: 616 NLNETIAKVTEN 627 Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107 G+T TKV + D+ + ++ M +D S + F T ++ R Sbjct: 100 GEGITRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVNLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|12585560|sp|O26861|SYV_METTH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS Length = 877 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 5/120 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284 ++ W+D+ + L+ G+ PD S + +PADL G DI+R A Y L+ Sbjct: 455 VLDTWMDSSISPLSVAGW---PDESYRELFPADLRPQGHDIIRTWAFYTILRCMALTGEK 511 Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 P + V + G K+SKS GNVI P EV+E+ G DALR + + F KD Sbjct: 512 PFSEIVINGMVFGEDGHKMSKSRGNVIAPEEVLEDYGADALRLWAAGSVPGSDVPFAWKD 571 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 28/52 (53%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 + + I T YP H+GH + D++ARF R+ G DVLF G D HG Sbjct: 36 KPRYIIDTPPPYPTGSIHMGHVLNWVYMDIIARFKRMRGFDVLFPQGWDCHG 87 >gi|306824631|ref|ZP_07457976.1| valine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433199|gb|EFM36170.1| valine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 882 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 442 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 498 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 557 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368 + + + N N I N +SR + M Sbjct: 558 FSYEKMDASWN--FINKIWN-ISRYILM 582 Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 88 ATQAKVEERLR 98 >gi|294055708|ref|YP_003549366.1| valyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221] gi|293615041|gb|ADE55196.1| valyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221] Length = 913 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 86/350 (24%), Positives = 140/350 (40%), Gaps = 74/350 (21%) Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQYIMYVWIDA------------- 234 +G++D +SR+ + WG +IP +P ++ +V ID Sbjct: 400 NGIQDWCISRQLW-WGHRIPVWYKKGFERSELDFSNPDHV-HVSIDGPSDPENWEQEADV 457 Query: 235 ----LTNYLTTTGYLD--NPDGSKAK---FW-PADLHVIGKDILRFHAIYWPAFLLSANL 284 ++YL G L NP + K FW P V G DI+ F W A ++ A L Sbjct: 458 LDTWASSYLWPMGNLGWPNPTADQQKEQDFWYPTSTLVTGFDIIFF----WVARMIMAGL 513 Query: 285 PL-----------------P-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325 L P K +F HG I KG K+SKSLGN DP+++IE+ G D L Sbjct: 514 ELFGEDAKELSDEEIAKRIPFKNIFIHGLIRDEKGRKMSKSLGNSPDPLDLIEKFGADGL 573 Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS-RSVSMILKDYDGMIPTPGAFT 384 R+ + G D + +D ++ + + N + N R +S + D + Sbjct: 574 RFGICNIAPTGSDILFSEDRIQ--IGRNFCNKLWNASRFRQMSGPMADNSSLESIHARID 631 Query: 385 ES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK 437 +S D IL + V E+ + + + Q+ D Y +A K +LK Sbjct: 632 QSLLDDTDHWILGRLAEVTAEVEKCFTDYELAPLTHQIYGFFWSDFCDWYVEASKG-KLK 690 Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487 + +R L + V+RQ+ L +P + +++ L E Q Sbjct: 691 GSEAER-DHCLAIQDLVLRQVLQLANPVIPHITEELWKGLGYGGEGSFIQ 739 >gi|188584421|ref|YP_001927866.1| valyl-tRNA synthetase [Methylobacterium populi BJ001] gi|179347919|gb|ACB83331.1| valyl-tRNA synthetase [Methylobacterium populi BJ001] Length = 906 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 12/127 (9%) Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277 + + DP ++ W + +T G+ D A+F+P + V GKDI+ +W A Sbjct: 464 VALTRDPD-VLDTWFSSALWPFSTLGWPDKTP-ELARFYPTNTLVTGKDII----FFWVA 517 Query: 278 FLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331 ++ L L + V+ H + KG K+SKS GNV+DP+++I+ G DALR+ L Sbjct: 518 RMMMMGLHLTDQAPFDTVYLHTLVRDEKGAKMSKSKGNVVDPVDLIDRFGADALRFTLAA 577 Query: 332 EIACGKD 338 A G+D Sbjct: 578 LAAPGRD 584 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 13/69 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA I D+L RF R+ G DVL+ GTD +AG+ Sbjct: 39 SIVIPPPNVTGSLHMGHALNNTIQDILVRFERMRGRDVLWQPGTD-----------HAGI 87 Query: 68 TTKVFVDQN 76 T++ V++ Sbjct: 88 ATQMVVERK 96 >gi|33241445|ref|NP_876386.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae TW-183] gi|33235953|gb|AAP98043.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae TW-183] Length = 1043 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 75/281 (26%), Positives = 125/281 (44%), Gaps = 27/281 (9%) Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 Y+ W D+ Y +N ++ F PAD G D R ++ ++SA L Sbjct: 513 YVFDCWFDSGAMPYAQNHYPFENQKETEEAF-PADFIAEGLDQTR--GWFYTLTVISAIL 569 Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339 P + +G IL + G K+SK L N P V++ G DALR +L+ + + Sbjct: 570 FDRPAFRNAIVNGIILAEDGNKMSKRLNNYPSPKYVLDTYGADALRLYLLHSVVVKAEDL 629 Query: 340 -FYDK--DGLKKRVNADLANGIG--NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 F DK +G+ K++ L N + N + K D A+TE D+ ILS Sbjct: 630 RFSDKGIEGVLKQILLPLTNVLSFFNTYAELYGFDPKSQD----IEPAYTEIDQWILSNL 685 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDR--ASTVLY 449 V+ ++RE+M ++ A+ ++ + ++ ++ ++ WE + T PDR A + LY Sbjct: 686 YSVVGKVRESMSQYHLNFAVEPFVTFIDDLTNWYIRRCRRRFWEAEDT-PDRRAAFSTLY 744 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490 EV+ ++ FVP LA I+ L + E D Sbjct: 745 ---EVLTVFCKVIAPFVPFLAEDIYQKLKLEKEPESVHLCD 782 >gi|271499707|ref|YP_003332732.1| leucyl-tRNA synthetase [Dickeya dadantii Ech586] gi|270343262|gb|ACZ76027.1| leucyl-tRNA synthetase [Dickeya dadantii Ech586] Length = 860 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 9/194 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + + YP+ + H+GH I DV++R+ R+ G +VL G D G AA Sbjct: 32 KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 + N ++ +L Y D I T + ++ + + K+ +KG +YK Sbjct: 92 KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGLVYK 151 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178 + + D+ +++V DG + V+ E +F +++AY D+LL+ Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITAYADELLNDLD 207 Query: 179 YYESHPEFILPIER 192 ES PE + ++R Sbjct: 208 TLESWPEQVKTMQR 221 >gi|238619860|ref|YP_002914686.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.16.4] gi|238380930|gb|ACR42018.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.16.4] gi|323477475|gb|ADX82713.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus HVE10/4] Length = 980 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 26/265 (9%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289 VW D+ + + G + + P DL + G D LR W LL + L L K Sbjct: 456 VWFDSGVAFFASLG--KDWQEKWKELGPVDLVLEGHDQLRG----WFFSLLRSGLILLDK 509 Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YD 342 V HGF+L +G ++ KSLGN ++P VI+ G D LR +L+R F + Sbjct: 510 APYVSVLVHGFMLDEQGREMHKSLGNYVEPSVVIQRYGRDILRLWLLRNTTWEDARFSWR 569 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESILSVCSRVL 398 L KR DL V S+ M L +++ + T + D ILS + +L Sbjct: 570 ALELTKR---DLQIIWNTYVFASMYMNLDNFEPVKYTLDDVIKYAKIEDLWILSRFNSML 626 Query: 399 QEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEV 454 +++ E+M+N +H +I+ LV +V R++ ++ W + N + Y+ + Sbjct: 627 KKVNESMKNYKVHEMANYLINFLVEDVSRFYIRLIRKRAW--IEANTQDKIAMYYILYFI 684 Query: 455 IRQLAILLQAFVPKLANKIFDILFV 479 ++Q IL +P ++ KI+ V Sbjct: 685 LKQWIILASTIIPFISEKIYKSFVV 709 >gi|15900480|ref|NP_345084.1| valyl-tRNA synthetase [Streptococcus pneumoniae TIGR4] gi|111657453|ref|ZP_01408202.1| hypothetical protein SpneT_02001347 [Streptococcus pneumoniae TIGR4] gi|81532202|sp|Q97S45|SYV_STRPN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|14972043|gb|AAK74724.1| valyl-tRNA synthetase [Streptococcus pneumoniae TIGR4] Length = 883 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ + +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392 + + + N N I N +SR + M + D + T A +D IL Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNEGLTLDVAHDNVTKVATGEAGNVTDRWILH 615 Query: 393 VCSRVLQEIREN 404 + + ++ EN Sbjct: 616 NLNETIAKVTEN 627 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107 G+T TKV + D+ + ++ M +D S + F T ++ R Sbjct: 100 GEGITRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVNLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|284997892|ref|YP_003419659.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5] gi|284445787|gb|ADB87289.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5] Length = 980 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 26/265 (9%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289 VW D+ + + G + + P DL + G D LR W LL + L L K Sbjct: 456 VWFDSGVAFFASLG--KDWQEKWKELGPVDLVLEGHDQLRG----WFFSLLRSGLILLDK 509 Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YD 342 V HGF+L +G ++ KSLGN ++P VI+ G D LR +L+R F + Sbjct: 510 APYVSVLVHGFMLDEQGREMHKSLGNYVEPSVVIQRYGRDILRLWLLRNTTWEDARFSWR 569 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESILSVCSRVL 398 L KR DL V S+ M L +++ + T + D ILS + +L Sbjct: 570 ALELTKR---DLQIIWNTYVFASMYMNLDNFEPVKYTLDDVIKYAKIEDLWILSRFNSML 626 Query: 399 QEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEV 454 +++ E+M+N +H +I+ LV +V R++ ++ W + N + Y+ + Sbjct: 627 KKVNESMKNYKVHEMANYLINFLVEDVSRFYIRLIRKRAW--IEANTQDKIAMYYILYFI 684 Query: 455 IRQLAILLQAFVPKLANKIFDILFV 479 ++Q IL +P ++ KI+ V Sbjct: 685 LKQWIILASTIIPFISEKIYKSFVV 709 >gi|262165198|ref|ZP_06032935.1| leucyl-tRNA synthetase [Vibrio mimicus VM223] gi|262024914|gb|EEY43582.1| leucyl-tRNA synthetase [Vibrio mimicus VM223] Length = 858 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 18/177 (10%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++RF RL G +VL G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115 + +N ++ +L YD R TCR + K+ + Sbjct: 92 KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFE 145 Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 KG +YK S + D+ +++V DG + PV+ E +F +++AY Sbjct: 146 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 198 >gi|254796861|ref|YP_003081698.1| leucyl-tRNA synthetase [Neorickettsia risticii str. Illinois] gi|254590097|gb|ACT69459.1| leucyl-tRNA synthetase [Neorickettsia risticii str. Illinois] Length = 854 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 49/90 (54%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 +R+K Y+ + YP+ + H+GH +I DVLAR+ R G +VL G D G KAA Sbjct: 48 KRKKYYVLSMFPYPSGKLHMGHLRNYVIGDVLARYKRSQGYNVLHPIGWDAFGLPAEKAA 107 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92 ++ + +++ ++N R + +SYD Sbjct: 108 ISSNIHPRIWTEKNIAKMRTSLKSIGLSYD 137 >gi|118618980|ref|YP_907312.1| valyl-tRNA synthetase [Mycobacterium ulcerans Agy99] gi|118571090|gb|ABL05841.1| valyl-tRNA synthetase protein ValS [Mycobacterium ulcerans Agy99] Length = 886 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 77/181 (42%), Gaps = 32/181 (17%) Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLL------------------SANLPLPKKVFSHGF 295 KF+P + V G DIL +W A ++ A +P VF HG Sbjct: 478 KFYPTSVLVTGYDIL----FFWVARMMMFGTFVGGDEVITLDGRRGAQVPF-TDVFLHGL 532 Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 I + G K+SKS GNVIDP++ I+ G DALR+ L R + G D +D ++ N Sbjct: 533 IRDEFGRKMSKSKGNVIDPLDWIDTFGADALRFTLARGASPGSDLAVGEDAVRASRN--- 589 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 G + + L + + P P G T++D IL V E+ + R Sbjct: 590 ---FGTKLFNATRYALLNGAALAPLPPLGELTDADRWILGRLEEVRAEVDSAFDSYEFSR 646 Query: 413 A 413 A Sbjct: 647 A 647 Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 22/122 (18%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK------V 71 H+GHA E + D L R R+ G +VL+ G D G Q + + A TK + Sbjct: 60 HMGHALEHTMMDALTRRKRMQGYEVLWQPGMDHAGIATQTVVEKQLAADGKTKEDFGREL 119 Query: 72 FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 FVD+ R + D +D S D F T ++ R ++K++ D G IY Sbjct: 120 FVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLYDAGLIY 177 Query: 121 KG 122 + Sbjct: 178 QA 179 >gi|94987090|ref|YP_595023.1| valyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] gi|94731339|emb|CAJ54702.1| Valyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] Length = 882 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/118 (37%), Positives = 61/118 (51%), Gaps = 11/118 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ N A F+P + V G DIL F W A ++ L Sbjct: 448 VLDTWFSSAIWPFSTLGW-PNKTPELAMFYPTSILVTGFDILFF----WVARMMMFGLHF 502 Query: 287 PKKV-FSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 K V F H +I +G K+SKSLGN IDPI++IE+ G DALR+ L A G+D Sbjct: 503 MKDVPFRHVYIHALIRDSEGRKMSKSLGNSIDPIQMIEKYGTDALRFTLTAFAAMGRD 560 >gi|67922817|ref|ZP_00516316.1| Valyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501] gi|67855310|gb|EAM50570.1| Valyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501] Length = 907 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 34/297 (11%) Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261 S ++ L +++ + IK+ DP ++ W + +T G+ +N + K ++P Sbjct: 442 SEVEALEKAKQEYGDNIKLEQDPD-VLDTWFSSGLWPFSTLGWPENTEDLKT-YYPTSTL 499 Query: 262 VIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318 V G DI+ F + A + +P K V+ HG + G+K+SK+ N IDP+ +I+ Sbjct: 500 VTGFDIIFFWVARMTMMAGYFTDEMPF-KDVYIHGLVRDENGKKMSKTANNGIDPLILID 558 Query: 319 EVGVDALRYFLVREIA-CGKD---GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKD 372 + G DALRY L+R++A G+D + K + V A + AN + N +R V M LK Sbjct: 559 KYGTDALRYTLIRDVAGAGQDISLQYDRKTDQSESVEASRNFANKLWN-AARFVMMHLKG 617 Query: 373 YDGMIPTPGAFTESDESILSVCSR-VLQEIRENMQN---QLIHRALAQVISLVSE----- 423 TP + + L +C R +L + +Q Q+ L + + E Sbjct: 618 -----ETPQSLGTPEIDKLELCDRWILSRFHQTVQQTKKQIEAYGLGEAAKGLYEFIWGD 672 Query: 424 -VDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 D Y + K W+ + T+ Y+ ++ LL F+P + +I+ L Sbjct: 673 FCDWYIELVKTRLWQETPSRDVARQTLAYILDGTLK----LLHPFMPHITEEIWQTL 725 >gi|257866932|ref|ZP_05646585.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257800988|gb|EEV29918.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC30] Length = 767 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 13/185 (7%) Query: 15 YPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73 YP+ Q H+GH D+L+RF R G +VL G D G + A + G F Sbjct: 4 YPSGQGLHVGHPEGYTATDILSRFKRSQGYNVLHPMGWDAFGLPAEQYALDTGNDPAEFT 63 Query: 74 DQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG-CYSGWYSL 130 +N FR + L SYD I TT+ ++ + ++ K+ +KG Y+ W Sbjct: 64 KKNIETFRRQINALGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAYEAEVPVNWVPE 123 Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYES--HPEFI 187 N++ + ++ Y+ P+ QWM +++AY D+LL E PE I Sbjct: 124 LGTVIANEEVIDGKSERGGYDVIRKPMRQWM------LKITAYADRLLDDLEEVDWPESI 177 Query: 188 LPIER 192 ++R Sbjct: 178 KEMQR 182 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 20/185 (10%) Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299 D K K W P D+++ G + H +Y W FL + K K+F+ G IL Sbjct: 477 DYDKLKRWMPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFEKLFNQGMILGEN 536 Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359 EK+SKS GNV++P +VI + G D LR + + ++++GL+ G Sbjct: 537 NEKMSKSRGNVVNPDDVINQYGADTLRLYEMFMGPLDASIAWNENGLE---------GSR 587 Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419 + R +I+ + M F +D + V + ++++ E+ + + A++Q++ Sbjct: 588 KFLDRVWRLIVDENGKMRDRITTF--NDGKLSKVYHQTVKKVTEDFEQLHFNTAISQLMV 645 Query: 420 LVSEV 424 V+E Sbjct: 646 FVNEA 650 >gi|254564061|ref|YP_003071156.1| valine tRNA synthetase [Methylobacterium extorquens DM4] gi|254271339|emb|CAX27351.1| valine tRNA synthetase [Methylobacterium extorquens DM4] Length = 949 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 12/122 (9%) Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282 DP ++ W + +T G+ D A+F+P + V GKDI+ +W A ++ Sbjct: 512 DPD-VLDTWFSSALWPFSTLGWPDKTP-ELARFYPTNTLVTGKDII----FFWVARMMMM 565 Query: 283 NLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336 L L + LH KG K+SKS GNV+DP+++I+ G DALR+ L A G Sbjct: 566 GLHLTDQAPFETVYLHTLVRDEKGAKMSKSKGNVVDPVDLIDRFGADALRFTLAALAAPG 625 Query: 337 KD 338 +D Sbjct: 626 RD 627 Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 14/89 (15%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN H+GHA I D+L RF R+ G DVL+ GTD +AG+ Sbjct: 39 SIVIPPPNVTGSLHMGHALNNTIQDILVRFERMRGKDVLWQPGTD-----------HAGI 87 Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFIR 96 T++ V++ R ++ ++F+R Sbjct: 88 ATQMVVERKLME-RQQPGRRELGREEFLR 115 >gi|330798120|ref|XP_003287103.1| hypothetical protein DICPUDRAFT_94325 [Dictyostelium purpureum] gi|325082881|gb|EGC36349.1| hypothetical protein DICPUDRAFT_94325 [Dictyostelium purpureum] Length = 911 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 7/177 (3%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E+EK Y + YP+ H+GH I+D +AR R+ G DV+ G D G AA Sbjct: 49 EKEKFYSLSQFPYPSGNLHMGHVRVYSISDCIARLKRMQGYDVIHPMGWDAFGLPAENAA 108 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120 + V+ + + N +D LD+ + D + T K ++ + ++ K+ G Y Sbjct: 109 IDKKVSPSYWTNLNINTMKDQLKRLDLHFDWDRELSTCNKDYYRWTQDIFLKLFKSGLAY 168 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKL 176 + + + D+ +++V D Q + + N V+ E + +FF+++A D+L Sbjct: 169 RKSATVNWDPIDQTVLANEQV----DAQGRSWRSNAIVEKKEMKQWFFKITAMADRL 221 >gi|229017502|ref|ZP_04174403.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1273] gi|229023717|ref|ZP_04180208.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1272] gi|228737578|gb|EEL88083.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1272] gi|228743826|gb|EEL93927.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1273] Length = 1033 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 17/257 (6%) Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283 ++ VW D+ + Y +N + + +F PAD+ G D R F+++ + L + Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571 Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341 +P K+V S G +L +G+K+SKS GN +DP++++ + G DALR+ LV F Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630 Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 ++ L+ + + + + N+ S V L +Y+ T+ DE +LS ++ Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688 Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456 +R + + A ++ +LV EV ++ + WE N ++A+ Y T+ EV+ Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745 Query: 457 QLAILLQAFVPKLANKI 473 ++ L+ F P +A I Sbjct: 746 TISKLIAPFTPFVAEDI 762 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75 N PH+GHA I DV+AR+ + G VL G D HG + + G++ K +++ Sbjct: 50 NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109 Query: 76 NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117 + +R+ + + + DD T E + ++ + I +KG Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144 +YKG Y + + EV +G Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196 >gi|229579204|ref|YP_002837602.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14] gi|228009918|gb|ACP45680.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14] Length = 980 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 26/265 (9%) Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289 VW D+ + + G + + P DL + G D LR W LL + L L K Sbjct: 456 VWFDSGVAFFASLG--KDWQEKWKELGPVDLVLEGHDQLRG----WFFSLLRSGLILLDK 509 Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YD 342 V HGF+L +G ++ KSLGN ++P VI+ G D LR +L+R F + Sbjct: 510 APYVSVLVHGFMLDEQGREMHKSLGNYVEPSVVIQRYGRDILRLWLLRNTTWEDARFSWR 569 Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESILSVCSRVL 398 L KR DL V S+ M L +++ + T + D ILS + +L Sbjct: 570 ALELTKR---DLQIIWNTYVFASMYMNLDNFEPVKYTLDDVIKYAKIEDLWILSRFNSML 626 Query: 399 QEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEV 454 +++ E+M+N +H +I+ LV +V R++ ++ W + N + Y+ + Sbjct: 627 KKVNESMKNYKVHEMANYLINFLVEDVSRFYIRLIRKRAW--IEANTQDKIAMYYILYFI 684 Query: 455 IRQLAILLQAFVPKLANKIFDILFV 479 ++Q IL +P ++ KI+ V Sbjct: 685 LKQWIILASTIIPFISEKIYKSFVV 709 >gi|15618033|ref|NP_224317.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae CWL029] gi|15835645|ref|NP_300169.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae J138] gi|8928383|sp|Q9Z972|SYI_CHLPN RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|4376371|gb|AAD18262.1| Isoleucyl-tRNA Synthetase [Chlamydophila pneumoniae CWL029] gi|8978483|dbj|BAA98320.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae J138] Length = 1043 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 75/281 (26%), Positives = 125/281 (44%), Gaps = 27/281 (9%) Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 Y+ W D+ Y +N ++ F PAD G D R ++ ++SA L Sbjct: 513 YVFDCWFDSGAMPYAQNHYPFENQKETEEAF-PADFIAEGLDQTR--GWFYTLTVISAIL 569 Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339 P + +G IL + G K+SK L N P V++ G DALR +L+ + + Sbjct: 570 FDRPAFRNAIVNGIILAEDGNKMSKRLNNYPSPKYVLDTYGADALRLYLLHSVVVKAEDL 629 Query: 340 -FYDK--DGLKKRVNADLANGIG--NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 F DK +G+ K++ L N + N + K D A+TE D+ ILS Sbjct: 630 RFSDKGIEGVLKQILLPLTNVLSFFNTYAELYGFDPKSQD----IEPAYTEIDQWILSNL 685 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDR--ASTVLY 449 V+ ++RE+M ++ A+ ++ + ++ ++ ++ WE + T PDR A + LY Sbjct: 686 YSVVGKVRESMSQYHLNFAVEPFVTFIDDLTNWYIRRCRRRFWEAEDT-PDRRAAFSTLY 744 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490 EV+ ++ FVP LA I+ L + E D Sbjct: 745 ---EVLTVFCKVIAPFVPFLAEDIYQKLKLEKEPESVHLCD 782 >gi|260773267|ref|ZP_05882183.1| leucyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14] gi|260612406|gb|EEX37609.1| leucyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14] Length = 858 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/263 (25%), Positives = 109/263 (41%), Gaps = 36/263 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 +EK Y + YP+ + H+GH I DV++RF RL G +V+ G D G AA Sbjct: 32 KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115 + +N + ++ +L YD R TCR + K+ + Sbjct: 92 KNKTAPAPWTYENIQYMKNQLKLLGFGYD------WSREFATCRPEYYRWEQEFFTKLYE 145 Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175 KG +YK S + D+ +++V DG + PV+ E +F +++AY + Sbjct: 146 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAYAQE 201 Query: 176 LLSYYESH---PEFILPIER----RNEVISF---VKSGLKDLSLSRKTFDWGIKIPDDPQ 225 LL ++ PE + ++R R+E + VK +DL + PD Sbjct: 202 LLDDLDNLDGWPEMVKTMQRNWIGRSEGVELSFQVKDQAQDLEVYTTR-------PDTLM 254 Query: 226 YIMYVWIDALTNYLTTTGYLDNP 248 + YV I A + L +NP Sbjct: 255 GVTYVGI-AAAHPLAVQAAANNP 276 >gi|121703584|ref|XP_001270056.1| leucyl-tRNA synthetase [Aspergillus clavatus NRRL 1] gi|119398200|gb|EAW08630.1| leucyl-tRNA synthetase [Aspergillus clavatus NRRL 1] Length = 994 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 9/196 (4%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++ K YI + YP+ H+GH I+DVLARF+R+ G +VL G D G AA Sbjct: 78 DKPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMKGHEVLHPMGWDAFGLPAENAA 137 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120 G+ + QN ++ + S+ D + T ++ + ++ + KG Y Sbjct: 138 IERGIDPAEWTKQNIAKMKEQLRSISTSFDWDRELATCSPEFYEHTQRIFLMLHKKGLAY 197 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180 + Y D+ +++V A+G + + V+ ++ + +FFR++ +++ LL+ Sbjct: 198 QAEAVVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEKLKLKQWFFRITDFKEMLLNDL 254 Query: 181 ES----HPEFILPIER 192 +S PE +L ++R Sbjct: 255 DSLAGGWPERVLAMQR 270 >gi|114764911|ref|ZP_01444084.1| valyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601] gi|114542623|gb|EAU45647.1| valyl-tRNA synthetase [Roseovarius sp. HTCC2601] Length = 1025 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 17/232 (7%) Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFIL-HKGEKISKSL 307 +++P + V G+DIL F W A ++ L +P + V+ HG + KG+K+SKSL Sbjct: 621 RYFPTSVLVTGQDILFF----WVARMMMMQLAVVDEIPFRDVYLHGLVRDAKGKKMSKSL 676 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 GNV+DP+E+I+E G DALR+ + G G D + + + N + Sbjct: 677 GNVVDPLEIIDEYGADALRFTNAAMASLG--GVLKLDMQRIAGYRNFGTKLWNAARFAEM 734 Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--D 425 G P P A ++ IL +RV + + + + + A + + V V D Sbjct: 735 NGAVGLGGDRPVPQATV--NKWILGETARVRETVDAALADYRFNDAALSLYAFVWGVVCD 792 Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 Y + KP + +A T ++ VI Q ILL +P + +++ L Sbjct: 793 WYVEFSKPLLQGEDEAAKAETQATMSW-VIDQCLILLHPIMPFITEELWGTL 843 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 8/53 (15%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNA 65 H+GHA+ + D+L R+HR+ G D L+ G D G +++AK A NA Sbjct: 52 HMGHAFNNTLQDILVRWHRMRGFDTLWQPGQDHAGIATQMVVERELAKDASNA 104 >gi|307710823|ref|ZP_07647251.1| valyl-tRNA synthetase [Streptococcus mitis SK321] gi|307617429|gb|EFN96601.1| valyl-tRNA synthetase [Streptococcus mitis SK321] Length = 883 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 7/145 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYYPTSTLVTGYDIIPFWVSRMIFQGLEFTGKS 502 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P K HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D + Sbjct: 503 PF-KNALIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561 Query: 344 DGLKKRVNADLANGIGNLVSRSVSM 368 + + N N I N +SR + M Sbjct: 562 EKMDASWN--FINKIWN-ISRYILM 583 Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 88 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 89 ATQAKVEERLR 99 >gi|195977313|ref|YP_002122557.1| leucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|238689784|sp|B4U0A1|SYL_STREM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|195974018|gb|ACG61544.1| Leucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 833 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 14/197 (7%) Query: 4 REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + K Y YP+ A H+GH D+L+RF R G +VL G D G + A Sbjct: 31 KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N NF+ + L SY D I TT+ ++ + ++ K+ +KG Y Sbjct: 91 MDTGNDPAEFTAENIANFKRQINALGFSYDWDREINTTDPSYYKWTQWIFTKLYEKGLAY 150 Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 + W A N++ + G G Y + QWM +++AY ++LL Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204 Query: 178 SYYES--HPEFILPIER 192 + E PE I ++R Sbjct: 205 ADLEEVDWPESIKDMQR 221 >gi|113869093|ref|YP_727582.1| leucyl-tRNA synthetase fused to ISAE1 Orf2 fusion protein [Ralstonia eutropha H16] gi|113527869|emb|CAJ94214.1| Leucyl-tRNA synthetase fused to ISAE1 Orf2 fusion protein [Ralstonia eutropha H16] Length = 1343 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 10/181 (5%) Query: 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61 KE+ K Y + + YP+ + H+GH I DV+AR+ R++G +VL G D G A Sbjct: 506 KEKPKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGNNVLMPMGWDAFGMPAENA 565 Query: 62 AQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117 A N GV + N + + M +D S + + T ++ + L+ K+ +KG Sbjct: 566 ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYRWNQWLFLKMLEKG 623 Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y+ + + D+ +++V DG+ + + V+ E Y+ R++ Y ++LL Sbjct: 624 IAYRKTGTVNWDPVDQTVLANEQVI---DGRGWRSG-AVVEKREIPMYYLRITEYAEELL 679 Query: 178 S 178 Sbjct: 680 G 680 >gi|195978584|ref|YP_002123828.1| valyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975289|gb|ACG62815.1| valyl-tRNA synthetase ValS [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 883 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDTDAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-KKVFS----HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 +K FS HG I +G K+SKSLGN IDP++VIE+ G D+LR+FL A G+D Sbjct: 499 TGRKPFSNVLIHGLIRDQEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ + E + +V+ Sbjct: 559 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEQATANVEQVVSG 603 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ ++ I L + I V+E Sbjct: 604 AAGNVTDRWILHNLNETIGKVTE 626 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 23/167 (13%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVTT----------KV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 G++ KV + D+ + ++ L +S D+ R T ++ R Sbjct: 100 EQGISRYDLGRDKFLDKVWEWKDEYAATIKEQWGKLGLSL-DYARDRFTLDEGLSKAVRK 158 Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ KG IY+G + W A + + ++K +G +Y+ + Sbjct: 159 VFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|16752936|ref|NP_445207.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae AR39] gi|7189579|gb|AAF38477.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae AR39] Length = 1043 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 75/281 (26%), Positives = 125/281 (44%), Gaps = 27/281 (9%) Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284 Y+ W D+ Y +N ++ F PAD G D R ++ ++SA L Sbjct: 513 YVFDCWFDSGAMPYAQNHYPFENQKETEEAF-PADFIAEGLDQTR--GWFYTLTVISAIL 569 Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339 P + +G IL + G K+SK L N P V++ G DALR +L+ + + Sbjct: 570 FDRPAFRNAIVNGIILAEDGNKMSKRLNNYPSPKYVLDTYGADALRLYLLHSVVVKAEDL 629 Query: 340 -FYDK--DGLKKRVNADLANGIG--NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394 F DK +G+ K++ L N + N + K D A+TE D+ ILS Sbjct: 630 RFSDKGIEGVLKQILLPLTNVLSFFNTYAELYGFDPKSQD----IEPAYTEIDQWILSNL 685 Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDR--ASTVLY 449 V+ ++RE+M ++ A+ ++ + ++ ++ ++ WE + T PDR A + LY Sbjct: 686 YSVVGKVRESMSQYHLNFAVEPFVTFIDDLTNWYIRRCRRRFWEAEDT-PDRRAAFSTLY 744 Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490 EV+ ++ FVP LA I+ L + E D Sbjct: 745 ---EVLTVFCKVIAPFVPFLAEDIYQKLKLEKEPESVHLCD 782 >gi|11498241|ref|NP_069467.1| isoleucyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304] gi|3122898|sp|O29622|SYI_ARCFU RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|2649988|gb|AAB90608.1| isoleucyl-tRNA synthetase (ileS) [Archaeoglobus fulgidus DSM 4304] Length = 1018 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 70/261 (26%), Positives = 114/261 (43%), Gaps = 21/261 (8%) Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276 ++PD + VW D+ + Y D + + WPAD G D R F++ Sbjct: 506 RVPD----VFDVWFDSGVASWGSIAYPLRKDKFE-ELWPADFITEGHDQTRGWFYSQLGT 560 Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335 + + P K V HGF L +G K+SKSLGNV++P EV+ ++GVD R +++ Sbjct: 561 SVVCFDKAPY-KAVLMHGFTLDEQGRKMSKSLGNVVEPEEVVGQIGVDGFRLYVLYSAPW 619 Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAFTESDESILSVC 394 F ++ + +N L N + N V + + M L +Y G D ILS Sbjct: 620 EDLRFSWEEA--RNINRML-NVVWNAVRFAHTYMSLDNYS--FGEKGELKIEDRWILSRL 674 Query: 395 SRVLQEIRENMQNQLIHRALAQVIS-LVSEVDR-YFDAQKP--WELKKTNPDRASTVLYV 450 ++E E M+ +HR + V + R Y +P WE ++ +P + + Y Sbjct: 675 ESFIKEANEAMEGYQVHRVVRAFFDFFVEDFSRWYIQIIRPRVWE-ERDSPSKLAA-YYT 732 Query: 451 TVEVIRQLAILLQAFVPKLAN 471 VI + + F P +A Sbjct: 733 MFRVIDRSLRAIAPFAPLIAE 753 Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 6 KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQN 64 K Y Y + H+G A+ ++ D + R+ R+ G T G D HG I K Q Sbjct: 35 KFYFVDGPPYTTGRIHLGTAWNKVLKDTILRYKRMMGFAPTDTPGWDMHGLPIEVKVEQE 94 Query: 65 AGVTTK 70 G TK Sbjct: 95 LGFRTK 100 >gi|296115214|ref|ZP_06833855.1| valyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295978315|gb|EFG85052.1| valyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 898 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 11/118 (9%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D A+++P D+ V G DI+ +W A ++ L Sbjct: 468 VLDTWFSSALWPFSTLGWPDQTP-ELARYYPTDVLVTGFDII----FFWVARMMMMGLHF 522 Query: 287 PK-----KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 K KVF HG + +G+K+SKS GN IDP+E+I+ G DA+R+ + G+D Sbjct: 523 MKDVPFRKVFIHGLVRDERGQKMSKSKGNGIDPLEMIDTYGADAMRFTICALTGLGRD 580 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 11/55 (20%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75 H+GHA M + D L R+ R+ G DVL+ GTD +AG+ T++ V++ Sbjct: 50 HVGHALTMTLQDTLIRWRRMQGRDVLWQPGTD-----------HAGIATQLVVER 93 >gi|225869700|ref|YP_002745647.1| leucyl-tRNA synthetase [Streptococcus equi subsp. equi 4047] gi|254782514|sp|C0M8N3|SYL_STRE4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|225699104|emb|CAW92273.1| leucyl-tRNA synthetase [Streptococcus equi subsp. equi 4047] Length = 833 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 14/197 (7%) Query: 4 REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + K Y YP+ A H+GH D+L+RF R G +VL G D G + A Sbjct: 31 KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120 + G F +N NF+ + L SY D I TT+ ++ + ++ K+ +KG Y Sbjct: 91 MDTGNDPAEFTAENIANFKRQINALGFSYDWDREINTTDPSYYKWTQWIFTKLYEKGLAY 150 Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 + W A N++ + G G Y + QWM +++AY ++LL Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204 Query: 178 SYYES--HPEFILPIER 192 + E PE I ++R Sbjct: 205 ADLEEVDWPESIKDMQR 221 >gi|327470389|gb|EGF15845.1| valine--tRNA ligase [Streptococcus sanguinis SK330] Length = 883 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368 + + + N N I N +SR + M Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILM 583 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 23/167 (13%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVTT----------KV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108 G++ KV + D+ + ++ + IS D+ R T ++ R Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGISV-DYSRERFTLDEGLSKAVRK 158 Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ KG IY+G + W A + + ++K +G +Y+ + Sbjct: 159 VFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|260431038|ref|ZP_05785009.1| valyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] gi|260414866|gb|EEX08125.1| valyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] Length = 1053 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 19/132 (14%) Query: 220 IPDDPQYIMY-VWIDA------LTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRF 270 I DP ++Y VW D ++ L G L P+ ++ +++P D+ + G DIL F Sbjct: 601 IDRDPTKLVYPVWRDPDVLDTWFSSGLWPIGTLGWPEQTEELQRYFPTDVLITGFDILFF 660 Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDA 324 W A ++ L + ++ H LH KG+K+SK+ GNVIDP+E+++E G DA Sbjct: 661 ----WVARMMMMQLAVVNEIPFHTVYLHQLVRDEKGKKMSKTTGNVIDPLEIVDEFGADA 716 Query: 325 LRYFLVREIACG 336 LR+ A G Sbjct: 717 LRFTNASMAAIG 728 Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 H+GHA+ + D+L R+HR+ G D L+ G D G Sbjct: 52 HVGHAFNNTLQDILIRWHRMRGFDTLWQPGQDHAG 86 >gi|95930682|ref|ZP_01313416.1| leucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684] gi|95133334|gb|EAT14999.1| leucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684] Length = 850 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 11/196 (5%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 ++EK Y+ YP+ + H+GH I DV+ARF RL G +VL G D G AA Sbjct: 31 DKEKFYLLEMFPYPSGRIHMGHVRNYSIGDVVARFKRLQGYNVLHPMGWDAFGMPAENAA 90 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119 G+ + +N N R + +SYD +F T + ++ ++++ K+ +KG Sbjct: 91 IQHGIHPAKWTVENIANMRLQLKRMGLSYDWDREFA-TCDVDYYKWEQLIFLKMFEKGLA 149 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179 YK S + + +++V A + V+ E + +FF+++ Y +LL Sbjct: 150 YKKSSSVNWCPTCQTVLANEQVEDDACWRCGTV----VEDKELDQWFFKITNYAQELLDE 205 Query: 180 YESH---PEFILPIER 192 + P+ +L ++R Sbjct: 206 IDKMAGWPDSVLTMQR 221 >gi|306830047|ref|ZP_07463233.1| valine--tRNA ligase [Streptococcus mitis ATCC 6249] gi|304427760|gb|EFM30854.1| valine--tRNA ligase [Streptococcus mitis ATCC 6249] Length = 883 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 25/203 (12%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 + + + N N I N +SR IL + +G+ D++ +V +V+ + Sbjct: 559 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGLT--------LDQATANV-EKVVNK 603 Query: 401 IRENMQNQLIHRALAQVISLVSE 423 N+ ++ I L + I V+E Sbjct: 604 EAGNVTDRWILHNLNETIGKVTE 626 Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107 G++ TKV + D+ + ++ M +D S + F T ++ R Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ ++ KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|183983752|ref|YP_001852043.1| valyl-tRNA synthetase protein ValS [Mycobacterium marinum M] gi|183177078|gb|ACC42188.1| valyl-tRNA synthetase protein ValS [Mycobacterium marinum M] Length = 886 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 77/181 (42%), Gaps = 32/181 (17%) Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLL------------------SANLPLPKKVFSHGF 295 KF+P + V G DIL +W A ++ A +P VF HG Sbjct: 478 KFYPTSVLVTGYDIL----FFWVARMMMFGTFVGGDEVITLDGRRGAQVPF-TDVFLHGL 532 Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354 I + G K+SKS GNVIDP++ I+ G DALR+ L R + G D +D ++ N Sbjct: 533 IRDEFGRKMSKSKGNVIDPLDWIDTFGADALRFTLARGASPGSDLAVGEDAVRASRN--- 589 Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHR 412 G + + L + + P P G T++D IL V E+ + R Sbjct: 590 ---FGTKLFNATRYALLNGAALAPLPPLGELTDADRWILGRLEEVRAEVDSAFDSYEFSR 646 Query: 413 A 413 A Sbjct: 647 A 647 Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 22/122 (18%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK------V 71 H+GHA E + D L R R+ G +VL+ G D G Q + + A TK + Sbjct: 60 HMGHALEHTMMDALTRRKRMQGYEVLWQPGMDHAGIATQTVVEKQLAADGKTKEDFGREL 119 Query: 72 FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120 FVD+ R + D +D S D F T ++ R ++K++ D G IY Sbjct: 120 FVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLYDAGLIY 177 Query: 121 KG 122 + Sbjct: 178 QA 179 >gi|86741959|ref|YP_482359.1| methionyl-tRNA synthetase [Frankia sp. CcI3] gi|86568821|gb|ABD12630.1| methionyl-tRNA synthetase [Frankia sp. CcI3] Length = 662 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 104/540 (19%), Positives = 199/540 (36%), Gaps = 51/540 (9%) Query: 7 LYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65 +++ + PN H+GH + + AD RF R++G ++ TG+D+ + A+ Sbjct: 122 VFVFSTPPTPNGDLHLGHLSGPYLGADAYVRFQRMNGANIWHLTGSDDFQSYVVDCARRE 181 Query: 66 GVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKGCY 124 G + S + ++DI D + T + + + + ++ D G I Sbjct: 182 GRSNAETAAHYSAEIAETLRLMDIPLDQYTVTNADPSYVPALKDFFTRLVDSGAIAPSDG 241 Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN----------------PVQWMEEEG---- 164 + + Y + +V G G N PV E Sbjct: 242 PALFDPKTGQYLYEVDVRGGCPGCGEITGGNICEECGEPNTVVDLADPVAKPSGEAPAAG 301 Query: 165 ----YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220 Y L + +L + H +P R + D+ +S + DWGI Sbjct: 302 TVRRYVLPLHEHAGTVLDH---HRRGRVPARLRELAARLFRRERVDIPVSHPS-DWGITP 357 Query: 221 --PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDILRFHAI 273 + +++VW + +L L G P D +H G D +HAI Sbjct: 358 HEANGAGQVIWVWPEMAFGFLHGIQKLGERIGRDWTAAEPTDDWKIVHFFGYDNSFYHAI 417 Query: 274 YWPAFLLSANLPLPKKV-----FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328 +P L LP + F L+ G K S + I ++++ VDA+RYF Sbjct: 418 LYPVLY---QLALPGWTPDIDYHVNEFFLYDGLKFSTGRRHAIWGKQILDAGSVDAVRYF 474 Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388 L R + ++ D + + L ++ + YDG+ P G +T Sbjct: 475 LARSRPEAQRTNFELDAYEHTLATTLIGTWQAWLNDLGQHVADHYDGVAPDAGNWTPEHA 534 Query: 389 SILSVCSRVLQEIRENMQNQ--LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446 LS + L + +++ +++A A++ +LV++ R+ ++ P+ T Sbjct: 535 GFLSQLAARLGALTASLRPGGFSLNQAAAELDALVADALRFSRRERVLARAGGMPNEVRT 594 Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG---FMLHKTF 503 + + LA +P+ A ++ + L ++ + S + + PG + H TF Sbjct: 595 ATALELAAAALLAHGAAPVMPRFAVRLAEALGQPAPDQ-WPSTVELIPPGSKVTLAHTTF 653 >gi|242052287|ref|XP_002455289.1| hypothetical protein SORBIDRAFT_03g007890 [Sorghum bicolor] gi|241927264|gb|EES00409.1| hypothetical protein SORBIDRAFT_03g007890 [Sorghum bicolor] Length = 958 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 11/179 (6%) Query: 4 REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 + K YI YP+ A H+GH D+L+RF R+ G +VL G D G + A Sbjct: 103 KPKCYILDMFPYPSGAGLHVGHPLGYTATDILSRFKRMKGFNVLHPMGWDAFGLPAEQYA 162 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120 G K+ ++N FR L SY D I TTE ++ + ++ ++ +G Y Sbjct: 163 IETGTHPKITTERNIGRFRTQLKSLGFSYDWDREISTTEPAYYKWTQWIFLQLLKRGLAY 222 Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177 + W N++ V ++ Y P+ QWM R+++Y D+LL Sbjct: 223 QAEVPVNWCPALGTVLANEEVVDGVSERGGYPVIRKPMRQWM------LRITSYADRLL 275 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 33/177 (18%) Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361 K+SKS GNVI+P +V+ E G D+LR + + + G++ + +G Sbjct: 718 KMSKSRGNVINPDDVVSEYGADSLRLYEMFMGPLRDSKTWSTGGIE-----GVHRFLGRT 772 Query: 362 VSRSVSMILKD---YDGMIPTPGAFTESDESILSVC-SRVLQEIRENMQNQLIHRALAQV 417 +V L D DG T T +L C +RV +EI+E N Sbjct: 773 WRLTVGPQLPDGSYNDGTTTTEDEPTLDQLRVLHKCIARVTEEIQETRFN---------- 822 Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474 + +S + + +A WE T P VI +LL F P LA +++ Sbjct: 823 -TAISAMMEFVNAAYKWE---TQPK----------TVIESFVLLLSPFAPHLAEELW 865 >gi|15672798|ref|NP_266972.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|14285774|sp|Q9CHB6|SYL_LACLA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|12723739|gb|AAK04914.1|AE006315_3 leucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|326406367|gb|ADZ63438.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56] Length = 829 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 14/199 (7%) Query: 2 KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60 K + K Y YP+ A H+GH D+L+R+ R G +VL G D G + Sbjct: 28 KNKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGFNVLHPMGWDAFGLPAEQ 87 Query: 61 AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118 A + G F +N NF+ + L SYD + TT+ + + ++ K+ +KG Sbjct: 88 YAMDTGNDPAEFTAENIANFKRQINSLGFSYDWEREVNTTDPNFYKWTQWIFTKLYEKGL 147 Query: 119 IYKGCYS-GWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175 Y+ + W A N++ + G G Y + QWM +++AY ++ Sbjct: 148 AYEAEVAVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 201 Query: 176 LLSYYES--HPEFILPIER 192 LL E PE I ++R Sbjct: 202 LLEDLEEVDWPESIKEMQR 220 >gi|312867069|ref|ZP_07727279.1| valine--tRNA ligase [Streptococcus parasanguinis F0405] gi|311097198|gb|EFQ55432.1| valine--tRNA ligase [Streptococcus parasanguinis F0405] Length = 883 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 4/115 (3%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + + Sbjct: 443 VLDTWFSSALWPFSTMGWPDVNSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 P + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 503 PF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556 Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94 Query: 68 TTKVFVDQNSR 78 ++ D SR Sbjct: 95 EARLAEDGISR 105 >gi|296876999|ref|ZP_06901043.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 15912] gi|296432034|gb|EFH17837.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 15912] Length = 883 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 4/115 (3%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + + Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338 P + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 503 PF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556 Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D G A A V Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94 Query: 68 TTKVFVDQNSR 78 ++ D SR Sbjct: 95 EARLAEDGISR 105 >gi|270292202|ref|ZP_06198417.1| valine--tRNA ligase [Streptococcus sp. M143] gi|270279730|gb|EFA25572.1| valine--tRNA ligase [Streptococcus sp. M143] Length = 883 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 7/145 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + + Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D + Sbjct: 503 PF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561 Query: 344 DGLKKRVNADLANGIGNLVSRSVSM 368 + + N N I N +SR + M Sbjct: 562 EKMDASWN--FINKIWN-ISRYILM 583 Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 88 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 89 ATQAKVEERLR 99 >gi|157151226|ref|YP_001449942.1| valyl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] gi|157076020|gb|ABV10703.1| valyl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] Length = 882 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 7/145 (4%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284 ++ W + +T G+ D +++P V G DI+ F + + + + Sbjct: 442 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 501 Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343 P + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D + Sbjct: 502 PF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 560 Query: 344 DGLKKRVNADLANGIGNLVSRSVSM 368 + + N N I N +SR + M Sbjct: 561 EKMDASWN--FINKIWN-ISRYILM 582 Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67 S I PN + H+GHA++ + D++ R R+ G D L+ G D +AG+ Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87 Query: 68 TTKVFVDQNSR 78 T+ V++ R Sbjct: 88 ATQAKVEERLR 98 >gi|322388969|ref|ZP_08062540.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 903] gi|321144338|gb|EFX39745.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 903] Length = 1218 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 778 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 833 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 834 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 893 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368 + + + N N I N +SR + M Sbjct: 894 FSYEKMDASWN--FINKIWN-ISRYILM 918 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 375 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 434 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G++ + F+D+ + M +D S + F T ++ R Sbjct: 435 GEGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 492 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 493 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 540 >gi|119467784|ref|XP_001257698.1| leucyl-tRNA synthetase [Neosartorya fischeri NRRL 181] gi|119405850|gb|EAW15801.1| leucyl-tRNA synthetase [Neosartorya fischeri NRRL 181] Length = 958 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 9/195 (4%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 R K YI + YP+ H+GH I+DVLARF+R+ G +VL G D G AA Sbjct: 48 RPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHEVLHPMGWDAFGLPAENAAI 107 Query: 64 NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121 G+ + QN ++ + S+ D + T ++ + ++ + KG Y+ Sbjct: 108 ERGIDPAEWTKQNIAKMKEQLRSISTSFDWDRELATCSPEFYEHTQRIFLMLYQKGLAYQ 167 Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177 Y D+ +++V A+G + + V+ ++ + +FFR++ +++ LL Sbjct: 168 AEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEKLKLKQWFFRITDFKEMLLKDLD 224 Query: 178 SYYESHPEFILPIER 192 S + PE +L ++R Sbjct: 225 SLTGAWPERVLTMQR 239 >gi|241205056|ref|YP_002976152.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858946|gb|ACS56613.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 838 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 9/178 (5%) Query: 4 REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 R K Y YP+ A H+GH D+ R+ R+ G +VL G D G + A Sbjct: 30 RPKFYALDMFPYPSGAGLHVGHPLGYTATDITCRYKRMRGFNVLHPMGWDSFGLPAERHA 89 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119 GV + +N FR L SYD +F TT+ + + ++ K+ +KG Sbjct: 90 MRTGVHPDITTKRNIETFRGQVQRLGFSYDWSREFA-TTDPAYVRWTQWIFLKLFEKGLA 148 Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177 Y+ + + A D+EV DG+Y +PV + R++AY D+LL Sbjct: 149 YQEEIAVNWCPAQNAVLADEEV---KDGRYVETG-DPVIRRRMRQWMLRITAYADRLL 202 >gi|90419373|ref|ZP_01227283.1| valyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] gi|90336310|gb|EAS50051.1| valyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] Length = 947 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 17/258 (6%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D A ++P + V G DI+ F W A ++ L Sbjct: 520 VLDTWFSSALWPFSTLGWPDQTP-ELATYYPTSVLVTGFDIIFF----WVARMMMMGLEF 574 Query: 287 PKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V+ H + K G K+SKS GNV+DP+++I+E G DALR+ L A G+D Sbjct: 575 MDEEPFHTVYVHALVRDKTGAKMSKSKGNVVDPLDLIDEFGADALRFTLAIMAAQGRDVK 634 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400 D + N + N +R M + G + + I++ R + E Sbjct: 635 LDPQRIAGYRN--FGTKLWN-ATRFAEMNGAVHGGTLDPSQLSLPLNRWIVTELGRTIAE 691 Query: 401 IRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458 + + A A + V + D Y + KP L ++ A+ V +V V+ ++ Sbjct: 692 TETAIAAYRFNEAAATLYRFVWNLFCDWYVELAKP-ALMGSDEAAANEVRHVMGSVLDRI 750 Query: 459 AILLQAFVPKLANKIFDI 476 LL F+P + +++ + Sbjct: 751 YALLHPFMPFITEELWQV 768 >gi|309799540|ref|ZP_07693769.1| valyl-tRNA synthetase [Streptococcus infantis SK1302] gi|308116816|gb|EFO54263.1| valyl-tRNA synthetase [Streptococcus infantis SK1302] Length = 883 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D +++P V G DI+ F W + ++ +L Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498 Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340 + V HG I +G K+SKSLGN IDP++VIE+ G DALR+FL A G+D Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558 Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368 + + + N N I N +SR + M Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILM 583 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%) Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63 S I PN + H+GHA++ + D++ R R+ G D L+ G D G K+ + + Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99 Query: 64 NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107 G+T + F+D+ + M +D S + F T ++ R Sbjct: 100 GEGITRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157 Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154 ++ + KG IY+G + W A + + ++K +G +Y+ + Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205 >gi|288818357|ref|YP_003432705.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|288787757|dbj|BAI69504.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|308751950|gb|ADO45433.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] Length = 606 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 6/178 (3%) Query: 3 EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62 E +K+Y+ YP+ + H+GH I DV+ARF R G VL G D G AA Sbjct: 28 EGKKVYVLEMFPYPSGRIHMGHVRNYTIGDVVARFLRFKGYRVLHPMGWDAFGLPAENAA 87 Query: 63 QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120 G+ + +N ++ L SY D I T + ++ + ++ K ++G Y Sbjct: 88 IKQGIHPADWTYKNIAYMKNQLKRLGFSYDWDREIATCDPEYYRWNQWIFLKFYERGLAY 147 Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178 + + DE +++V DG+ + PV E ++ +++ Y D+LL Sbjct: 148 RKLAEVNWCPNDETVLANEQV---IDGRCWRCG-TPVIKKEVPSWYLKITHYADRLLE 201 >gi|15645767|ref|NP_207944.1| valyl-tRNA synthetase [Helicobacter pylori 26695] gi|2501065|sp|P56000|SYV_HELPY RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA ligase; Short=ValRS gi|2314306|gb|AAD08195.1| valyl-tRNA synthetase (valS) [Helicobacter pylori 26695] Length = 874 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 14/116 (12%) Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307 F+P + G DIL F W A +L + LP K ++ H + KGEK+SKS Sbjct: 484 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 538 Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363 GNVIDP+E+IE+ G D+LR+ L A G+D L+ N + AN + N S Sbjct: 539 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKLFNAAS 592 Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%) Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55 HIGHA + + D+LAR+ R+DG L+ G D G Sbjct: 58 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 92 >gi|331695815|ref|YP_004332054.1| Valyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] gi|326950504|gb|AEA24201.1| Valyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] Length = 874 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 9/255 (3%) Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286 ++ W + +T G+ D + + +++P V G DIL F + F A Sbjct: 452 VLDTWFSSGLWPFSTLGWPDKTEDLE-RYYPTSALVTGYDILFFWVVRMMMFGTYAMGAT 510 Query: 287 P-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344 P + V+ HG I + G K+SKS GNVIDP+E+I+ G DALR+ + R G D + Sbjct: 511 PFRHVYLHGLIRDEHGRKMSKSKGNVIDPLELIDAYGADALRFTIARGSNPGTDMSLSDE 570 Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404 + N + N +++ G+ P + T++D IL +V Q+ Sbjct: 571 WVAASRN--FTTKLWNATRFAIANGADAAAGL-PATESLTDADRWILGRLHQVRQQTDAL 627 Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462 +++ +A + + D Y + KP +L A+ V V+ L LL Sbjct: 628 LEDFQFAKATEGLFHFTWDELCDWYIELAKP-QLADPASTTAANTRAVLGHVLDALLRLL 686 Query: 463 QAFVPKLANKIFDIL 477 VP + ++ L Sbjct: 687 HPIVPFVTEALWTGL 701 >gi|313792292|gb|EFS40393.1| leucyl-tRNA synthetase [Propionibacterium acnes HL110PA1] Length = 826 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%) Query: 4 REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63 RE+ Y+ AYP+ H+GHA I DVLAR+ RL G DVL G D G AA Sbjct: 38 RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97 Query: 64 NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117 G + +D + +F+ A +S+D +R T+++ ++ + L+ + +KG Sbjct: 98 KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153 Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172 Y K ++ W D+ +++V G Q N QW +FR++ Y Sbjct: 154 LAYRKDSWANWCP-NDQTGLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204 Query: 173 QDKLLSYYES----HPEFILPIER 192 +LL + PE +L ++R Sbjct: 205 AQRLLDDIDQIEGKWPERVLSMQR 228 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 24/190 (12%) Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347 +++ + G ++++G +SKSLGN +D + I+E GVDA+R ++ G D+D Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630 Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407 V+ R S + D D + T+ D ++ V R + +I E ++ Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684 Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467 + +A+++ LV+ + D+ +P E + A L P Sbjct: 685 GRYNVVVARIMELVNATRKAIDSG----CGPADP--------AVREAVTFTAQALSLVAP 732 Query: 468 KLANKIFDIL 477 LA +++++L Sbjct: 733 YLAEEMWEML 742 >gi|212638274|ref|YP_002314794.1| leucyl-tRNA synthetase [Anoxybacillus flavithermus WK1] gi|226731223|sp|B7GK53|SYL_ANOFW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|212559754|gb|ACJ32809.1| Leucyl-tRNA synthetase [Anoxybacillus flavithermus WK1] Length = 805 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 11/195 (5%) Query: 4 REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62