HHsearch alignment for GI: 255764462 and conserved domain: COG0223
>COG0223 Fmt Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=621.39 Aligned_cols=301 Identities=44% Similarity=0.771 Sum_probs=290.5
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCC-HHHHHHCC
Q ss_conf 70699977986889999999967984999982757822757875678988999998599799702434420-02342104
Q gi|255764462|r 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEE-YEQFLSFN 80 (310)
Q Consensus 2 ~mkI~f~G~~~~~~~~l~~l~~~~~~i~~vvt~~d~~~~~~~~~~~~~~v~~~a~~~~ip~~~~~~~~~~~-~~~l~~~~ 80 (310)
T Consensus 1 ~mkivF~GTp~fa~~~L~~L~~~~~eivaV~Tqpdkp~g-R~~~l~~spVk~~A~~~~ipv~qP~~l~~~e~~~~l~~l~ 79 (307)
T COG0223 1 MMRIVFFGTPEFAVPSLEALIEAGHEIVAVVTQPDKPAG-RGKKLTPSPVKRLALELGIPVFQPEKLNDPEFLEELAALD 79 (307)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCC-CCCCCCCCHHHHHHHHCCCCEECCCCCCCHHHHHHHHCCC
T ss_conf 917999767445499999998289804899948997667-8785888838999997499556644478689999986039
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCC
Q ss_conf 57313202421124430012110010102322210332002444431034545432022012332034542014543332
Q gi|255764462|r 81 ADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSN 160 (310)
Q Consensus 81 ~D~~v~~~~~~ii~~~il~~~~~g~iN~H~s~LP~yRG~~pi~wai~~g~~~~g~t~~~~~~~~D~G~Ii~q~~~~I~~~ 160 (310)
T Consensus 80 ~D~ivvvayG~ilp~~iL~~~~~G~iNvH~SLLPr~RGaAPIq~aI~~Gd~~TGvTim~M~~~lDaG~Il~q~~~~I~~~ 159 (307)
T COG0223 80 PDLIVVVAYGQILPKEILDLPPYGCINLHPSLLPRYRGAAPIQWAILNGDTETGVTIMQMDEGLDAGDILAQREVPIEPD 159 (307)
T ss_pred CCEEEEEEHHHHCCHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCC
T ss_conf 99999974222377999805767749866754711138447899997598601249888224578766402677045774
Q ss_pred CCHHHHHHCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf 21011000002330112232000000024655678830001112221122221024568888875431276654248994
Q gi|255764462|r 161 INTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240 (310)
Q Consensus 161 ~t~~~L~~kl~~~~~~ll~~~l~~i~~g~~~~~~Q~~~~~sy~~k~~~~d~~Idw~~~a~~I~n~iRA~~P~PgA~~~~~ 240 (310)
T Consensus 160 dta~~L~~kLa~~ga~lL~~~L~~i~~g~~~~~~Q~e~~~tya~ki~ked~~Idw~~~a~~i~n~IRa~~P~Pga~~~~- 238 (307)
T COG0223 160 DTAGSLHDKLAELGAELLLETLPQLEAGTLTPIPQDEEEATYAPKITKEDGRIDWSKPAAQILNKIRAFNPWPGAWTEL- 238 (307)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEE-
T ss_conf 2588999999999999999999999659987778875547403477887731577678999999874268998559987-
Q ss_pred ECCCCEEEEEEEEEECCCC--CCCCEEE---ECCEEEEECCCEEEEEEEECCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 0585146678865651788--8873797---48879980798699998854869712488996479999884
Q gi|255764462|r 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGC 307 (310)
Q Consensus 241 ~~~~~~~iki~~~~~~~~~--~~pG~I~---~~~l~V~c~dG~i~I~~lq~~Gkk~m~a~df~ng~~~~~G~ 307 (310)
T Consensus 239 ---~~~~iki~~a~~~~~~~~~~pG~i~~~~~~~l~Va~~~g~l~l~~lQ~~gkk~~~~~~~l~g~~~~~g~ 307 (307)
T COG0223 239 ---GGKRIKIWEARVLEGASNGKPGEILAADKKGLLVACGDGALRLTELQPAGKKAMSAADFLNGRRLVKGA 307 (307)
T ss_pred ---CCEEEEEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCC
T ss_conf ---895899998787055566899535896577689980896099987225778778989985555665689