HHsearch results for GI: 255764462 and protein with PDBid: 1zgh_A

>1zgh_A Methionyl-tRNA formyltransferase; southeast collaboratory for structural genomics, PSI, protein structure initiative, secsg; 2.05A {Clostridium thermocellum atcc 27405} SCOP: b.46.1.1 c.65.1.1
Probab=100.00  E-value=2.8e-45  Score=306.55  Aligned_cols=205  Identities=20%  Similarity=0.263  Sum_probs=168.4

Q ss_pred             HHHHHHHHCCCCEEEE--CCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf             8899999859979970--24344200234210457313202421124430012110010102322210332002444431
Q gi|255764462|r   50 AVHKKAQEFSLPALVP--TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIM  127 (310)
Q Consensus        50 ~v~~~a~~~~ip~~~~--~~~~~~~~~~l~~~~~D~~v~~~~~~ii~~~il~~~~~g~iN~H~s~LP~yRG~~pi~wai~  127 (310)
                      .++.++.++...+...  .+.++...+.+++.+||++|+++|++++|+++|+  ++++||+|||+||+|||++|++|||+
T Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pd~i~~~~~~~ii~~~il~--~~~~in~H~s~LP~~rG~~p~~~~i~  122 (260)
T 1zgh_A           45 NAQKFKKENESKYNTTIITNKDELTFEKVKLINPEYILFPHWSWIIPKEIFE--NFTCVVFHMTDLPFGRGGSPLQNLIE  122 (260)
T ss_dssp             HHHHHHHHTTTTEEEEEECSGGGCCHHHHHHHCCSEEEESSCCSCCCHHHHT--TSCEEEEESSCTTTTEESCHHHHHHH
T ss_pred             HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHH--HCCEEEECCCCCCCCCCCCHHHHHHH
T ss_conf             9999998614222268861846878999985398999982700113899995--39979982673757789998899997


Q ss_pred             CCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             03454543202201233203454201454333221011000002330112232000000024655678830001112221
Q gi|255764462|r  128 AGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKIS  207 (310)
Q Consensus       128 ~g~~~~g~t~~~~~~~~D~G~Ii~q~~~~I~~~~t~~~L~~kl~~~~~~ll~~~l~~i~~g~~~~~~Q~~~~~sy~~k~~  207 (310)
                      +|++++|+|+|+|++++|+|||++|+++++..  |..+++.++..   .++.+.+..+.++...+ .|+.+.++|+++++
T Consensus       123 ~~~~~~g~t~~~~~~~iD~G~Ii~q~~i~i~~--~~~~l~~k~~~---~~~~~li~~i~~~~~~~-~q~~~~~ty~~k~~  196 (260)
T 1zgh_A          123 RGIKKTKISAIKVDGGIDTGDIFFKRDLDLYG--TAEEIFMRASK---IIFNDMIPELLTKRPVP-QKQEGEATVFQRRK  196 (260)
T ss_dssp             TTCCEEEEEEEECCSSSSCSCEEEEEEEECCS--CHHHHHHHHHH---HHHHTHHHHHHHHCCCC-BCCCSCCCEECCCC
T ss_pred             CCCCCCCEEEEEECCCCCCCCCEEEEEEEECC--CHHHHHHHHHH---HHHHHHHHHHHCCCCCC-CCCCCCCEEEECCC
T ss_conf             45554634899736887589984588898658--71467899999---99998888875589542-23367535410255


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHCC--CCCCCEEEEEECCCCEEEEEEEEEECCCC-CCCCEEE
Q ss_conf             12222102456888887543127--66542489940585146678865651788-8873797
Q gi|255764462|r  208 KGETRVNFCRSAENVHNHIRALS--PFPGAWLEMMIGNKHERIKLLESQLVEGE-GKPGEVI  266 (310)
Q Consensus       208 ~~d~~Idw~~~a~~I~n~iRA~~--P~PgA~~~~~~~~~~~~iki~~~~~~~~~-~~pG~I~  266 (310)
                      ++|++|||++++++|+|+||||+  ||||||+++    +++++++++++..+.. ..||+|+
T Consensus       197 ~~d~~Id~n~sa~~I~~~IRAl~~~pyPgAf~~~----~~~kI~i~~a~l~~~~i~a~~~Ii  254 (260)
T 1zgh_A          197 PEQSEISPDFDLEKIYDYIRMLDGEGYPRAFIKY----GKYRLEFSRASMKNGKIIADVEII  254 (260)
T ss_dssp             GGGGBCCTTSCHHHHHHHHHHTCSTTCCCCEEEE----TTEEEEEEEEEEETTEEEEEEEEE
T ss_pred             CHHCEECCCCCHHHHHHHHHCCCCCCCCCEEEEE----CCEEEEEEEEEECCCCCCCCCEEE
T ss_conf             0536788889999999983406999999079999----999999999898389355894799