HHsearch results for GI: 255764462 and protein with PDBid: 1zgh_A
>1zgh_A Methionyl-tRNA formyltransferase; southeast collaboratory for structural genomics, PSI, protein structure initiative, secsg; 2.05A {Clostridium thermocellum atcc 27405} SCOP: b.46.1.1 c.65.1.1
Probab=100.00 E-value=2.8e-45 Score=306.55 Aligned_cols=205 Identities=20% Similarity=0.263 Sum_probs=168.4
Q ss_pred HHHHHHHHCCCCEEEE--CCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 8899999859979970--24344200234210457313202421124430012110010102322210332002444431
Q gi|255764462|r 50 AVHKKAQEFSLPALVP--TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIM 127 (310)
Q Consensus 50 ~v~~~a~~~~ip~~~~--~~~~~~~~~~l~~~~~D~~v~~~~~~ii~~~il~~~~~g~iN~H~s~LP~yRG~~pi~wai~ 127 (310)
.++.++.++...+... .+.++...+.+++.+||++|+++|++++|+++|+ ++++||+|||+||+|||++|++|||+
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pd~i~~~~~~~ii~~~il~--~~~~in~H~s~LP~~rG~~p~~~~i~ 122 (260)
T 1zgh_A 45 NAQKFKKENESKYNTTIITNKDELTFEKVKLINPEYILFPHWSWIIPKEIFE--NFTCVVFHMTDLPFGRGGSPLQNLIE 122 (260)
T ss_dssp HHHHHHHHTTTTEEEEEECSGGGCCHHHHHHHCCSEEEESSCCSCCCHHHHT--TSCEEEEESSCTTTTEESCHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHH--HCCEEEECCCCCCCCCCCCHHHHHHH
T ss_conf 9999998614222268861846878999985398999982700113899995--39979982673757789998899997
Q ss_pred CCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 03454543202201233203454201454333221011000002330112232000000024655678830001112221
Q gi|255764462|r 128 AGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKIS 207 (310)
Q Consensus 128 ~g~~~~g~t~~~~~~~~D~G~Ii~q~~~~I~~~~t~~~L~~kl~~~~~~ll~~~l~~i~~g~~~~~~Q~~~~~sy~~k~~ 207 (310)
+|++++|+|+|+|++++|+|||++|+++++.. |..+++.++.. .++.+.+..+.++...+ .|+.+.++|+++++
T Consensus 123 ~~~~~~g~t~~~~~~~iD~G~Ii~q~~i~i~~--~~~~l~~k~~~---~~~~~li~~i~~~~~~~-~q~~~~~ty~~k~~ 196 (260)
T 1zgh_A 123 RGIKKTKISAIKVDGGIDTGDIFFKRDLDLYG--TAEEIFMRASK---IIFNDMIPELLTKRPVP-QKQEGEATVFQRRK 196 (260)
T ss_dssp TTCCEEEEEEEECCSSSSCSCEEEEEEEECCS--CHHHHHHHHHH---HHHHTHHHHHHHHCCCC-BCCCSCCCEECCCC
T ss_pred CCCCCCCEEEEEECCCCCCCCCEEEEEEEECC--CHHHHHHHHHH---HHHHHHHHHHHCCCCCC-CCCCCCCEEEECCC
T ss_conf 45554634899736887589984588898658--71467899999---99998888875589542-23367535410255
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCC--CCCCCEEEEEECCCCEEEEEEEEEECCCC-CCCCEEE
Q ss_conf 12222102456888887543127--66542489940585146678865651788-8873797
Q gi|255764462|r 208 KGETRVNFCRSAENVHNHIRALS--PFPGAWLEMMIGNKHERIKLLESQLVEGE-GKPGEVI 266 (310)
Q Consensus 208 ~~d~~Idw~~~a~~I~n~iRA~~--P~PgA~~~~~~~~~~~~iki~~~~~~~~~-~~pG~I~ 266 (310)
++|++|||++++++|+|+||||+ ||||||+++ +++++++++++..+.. ..||+|+
T Consensus 197 ~~d~~Id~n~sa~~I~~~IRAl~~~pyPgAf~~~----~~~kI~i~~a~l~~~~i~a~~~Ii 254 (260)
T 1zgh_A 197 PEQSEISPDFDLEKIYDYIRMLDGEGYPRAFIKY----GKYRLEFSRASMKNGKIIADVEII 254 (260)
T ss_dssp GGGGBCCTTSCHHHHHHHHHHTCSTTCCCCEEEE----TTEEEEEEEEEEETTEEEEEEEEE
T ss_pred CHHCEECCCCCHHHHHHHHHCCCCCCCCCEEEEE----CCEEEEEEEEEECCCCCCCCCEEE
T ss_conf 0536788889999999983406999999079999----999999999898389355894799