HHsearch results for GI: 255764462 and protein with PDBid: 3gpi_A
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.02 E-value=0.043 Score=32.15 Aligned_cols=70 Identities=10% Similarity=0.291 Sum_probs=46.3
Q ss_pred CCC-EEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHC
Q ss_conf 970-6999779868899999999679849999827578227578756789889999985997997024344200234210
Q gi|255764462|r 1 MTL-RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSF 79 (310)
Q Consensus 1 m~m-kI~f~G~~~~~~~~l~~l~~~~~~i~~vvt~~d~~~~~~~~~~~~~~v~~~a~~~~ip~~~~~~~~~~~~~~l~~~ 79 (310)
|+| ||++.|+...+..+.+.|++.+++|.++...+++ . ..++..+..+-.+.+.+..+...
T Consensus 1 M~m~kiLItGaG~iG~~l~~~L~~~g~~V~~~~R~~~~--------~----------~~~~~~~~~Dl~~~~~~~~~~~~ 62 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQP--------M----------PAGVQTLIADVTRPDTLASIVHL 62 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSC--------C----------CTTCCEEECCTTCGGGCTTGGGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHH--------C----------CCCCEEEEECCCCHHHHHHHHCC
T ss_conf 99787999894599999999999785989999787011--------6----------06774999048787887754303
Q ss_pred CCCCEEEEC
Q ss_conf 457313202
Q gi|255764462|r 80 NADVAVVVA 88 (310)
Q Consensus 80 ~~D~~v~~~ 88 (310)
.+|+++.+.
T Consensus 63 ~~d~vv~~~ 71 (286)
T 3gpi_A 63 RPEILVYCV 71 (286)
T ss_dssp CCSEEEECH
T ss_pred CCCEEEEEC
T ss_conf 541676410