HHSEARCH alignment of GI: 255764462 and SCOP domain: d1lssa_

Alignment

Probab=96.38  E-value=0.0057  Score=36.17  Aligned_cols=72  Identities=15%  Similarity=0.164  Sum_probs=49.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCC
Q ss_conf             06999779868899999999679849999827578227578756789889999985997997024344200234210457
Q gi|255764462|r    3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNAD   82 (310)
Q Consensus         3 mkI~f~G~~~~~~~~l~~l~~~~~~i~~vvt~~d~~~~~~~~~~~~~~v~~~a~~~~ip~~~~~~~~~~~~~~l~~~~~D   82 (310)
                      |||+.+|...++..+.+.|.+.+++++.|=..|+             -+.+.+.+.++.++.-+-.+.+.++...-.++|
T Consensus         1 M~IvI~G~G~~G~~la~~L~~~g~~v~vid~d~~-------------~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~   67 (132)
T d1lssa_           1 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKD-------------ICKKASAEIDALVINGDCTKIKTLEDAGIEDAD   67 (132)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH-------------HHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCS
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCCCEECCCHH-------------HHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHH
T ss_conf             9899989889999999999977997200217846-------------502101110034314744311656650724543


Q ss_pred             CEEEE
Q ss_conf             31320
Q gi|255764462|r   83 VAVVV   87 (310)
Q Consensus        83 ~~v~~   87 (310)
                      .++++
T Consensus        68 ~vv~~   72 (132)
T d1lssa_          68 MYIAV   72 (132)
T ss_dssp             EEEEC
T ss_pred             HHCCC
T ss_conf             22246

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]