HHSEARCH alignment of GI: 255764462 and SCOP domain: d1zgha2

Alignment
>d1zgha2 c.65.1.1 (A:1-164) Methionyl-tRNAfmet formyltransferase {Clostridium thermocellum [TaxId: 1515]}
Probab=99.97  E-value=2e-33  Score=229.20  Aligned_cols=162  Identities=19%  Similarity=0.243  Sum_probs=130.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEE--CCCCCCCHHHHHHCC
Q ss_conf             069997798688999999996798499998275782275787567898899999859979970--243442002342104
Q gi|255764462|r    3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP--TKLGQEEYEQFLSFN   80 (310)
Q Consensus         3 mkI~f~G~~~~~~~~l~~l~~~~~~i~~vvt~~d~~~~~~~~~~~~~~v~~~a~~~~ip~~~~--~~~~~~~~~~l~~~~   80 (310)
                      |+|++.+...+....++.+.+.                                 ++.++...  .+.++...+.+++.+
T Consensus         1 ~~iii~~~k~~~~~~~~~~~k~---------------------------------~~~~~~~~~~~n~~~~~~~~i~~~~   47 (164)
T d1zgha2           1 MNIIIATTKSWNIKNAQKFKKE---------------------------------NESKYNTTIITNKDELTFEKVKLIN   47 (164)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHH---------------------------------TTTTEEEEEECSGGGCCHHHHHHHC
T ss_pred             CEEEEECCCHHHHHHHHHHHHH---------------------------------HCCCCCEEEECCHHHHHHHHHHHCC
T ss_conf             9799984726528999999997---------------------------------0576635664381288999999609


Q ss_pred             CCCEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCC
Q ss_conf             57313202421124430012110010102322210332002444431034545432022012332034542014543332
Q gi|255764462|r   81 ADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSN  160 (310)
Q Consensus        81 ~D~~v~~~~~~ii~~~il~~~~~g~iN~H~s~LP~yRG~~pi~wai~~g~~~~g~t~~~~~~~~D~G~Ii~q~~~~I~~~  160 (310)
                      ||++++++|++++|+++|+  ++|++|+|||+||+|||++|++|||++|++++|+|+|+|++++|+|+|+.|+.+++.  
T Consensus        48 ~D~ii~~g~~~ii~~~il~--~~~~in~H~s~LP~yRG~~p~~wai~~~~~~~Gvtih~~~~~iD~G~Ii~q~~~~i~--  123 (164)
T d1zgha2          48 PEYILFPHWSWIIPKEIFE--NFTCVVFHMTDLPFGRGGSPLQNLIERGIKKTKISAIKVDGGIDTGDIFFKRDLDLY--  123 (164)
T ss_dssp             CSEEEESSCCSCCCHHHHT--TSCEEEEESSCTTTTEESCHHHHHHHTTCCEEEEEEEECCSSSSCSCEEEEEEEECC--
T ss_pred             CCEEEEECCCCCCCHHHHH--HCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCC--
T ss_conf             9999993702303899994--099820897801244233533310012335542036774067886778999997789--


Q ss_pred             CCHHHHHHCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             210110000023301122320000000246556788300011122
Q gi|255764462|r  161 INTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEK  205 (310)
Q Consensus       161 ~t~~~L~~kl~~~~~~ll~~~l~~i~~g~~~~~~Q~~~~~sy~~k  205 (310)
                      +|..+++.+++   ..++.+++..+.++...+.+|++ .++|++|
T Consensus       124 ~~~~~~~~~~~---~~~~~~~i~~i~~~~~~~~~Q~~-~~~~y~R  164 (164)
T d1zgha2         124 GTAEEIFMRAS---KIIFNDMIPELLTKRPVPQKQEG-EATVFQR  164 (164)
T ss_dssp             SCHHHHHHHHH---HHHHHTHHHHHHHHCCCCBCCCS-CCCEECC
T ss_pred             CCHHHHHHHHH---HHHHHHHHHHHHCCCCEEECCCC-CCCEECC
T ss_conf             99999999999---99999999999869981177899-9754088


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Clostridium thermocellum [TaxId: 1515]